--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1597.94 -1631.77
2 -1597.88 -1626.60
--------------------------------------
TOTAL -1597.91 -1631.08
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.209584 0.000672 0.159976 0.260605 0.207728 712.79 1106.90 1.000
r(A<->C){all} 0.141028 0.001540 0.071792 0.221910 0.138815 513.84 557.94 1.000
r(A<->G){all} 0.200779 0.002161 0.111705 0.291271 0.197789 583.95 609.66 1.000
r(A<->T){all} 0.075992 0.000555 0.030503 0.120984 0.073421 861.54 921.14 1.000
r(C<->G){all} 0.065990 0.000999 0.014304 0.131858 0.062268 640.46 674.29 1.000
r(C<->T){all} 0.396777 0.002607 0.295763 0.496783 0.394717 553.08 598.70 1.000
r(G<->T){all} 0.119434 0.000905 0.060891 0.175061 0.117081 802.42 827.70 1.000
pi(A){all} 0.229424 0.000237 0.200886 0.260892 0.229206 1126.69 1177.43 1.000
pi(C){all} 0.195045 0.000220 0.167692 0.224765 0.194943 755.62 830.44 1.000
pi(G){all} 0.197214 0.000203 0.170236 0.224697 0.196959 915.12 991.74 1.000
pi(T){all} 0.378318 0.000315 0.343173 0.413175 0.378483 1156.69 1173.12 1.000
alpha{1,2} 0.838821 0.633646 0.000494 2.340800 0.605708 800.73 1001.44 1.000
alpha{3} 1.333005 1.033418 0.073511 3.307808 1.030137 1195.30 1261.90 1.000
pinvar{all} 0.308232 0.027115 0.000129 0.568187 0.313706 523.68 688.83 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
-- Starting log on Thu Nov 17 16:36:21 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result--
-- Starting log on Thu Nov 17 16:38:23 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result--
-- Starting log on Thu Nov 17 16:36:21 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result--
-- Starting log on Thu Nov 17 22:59:58 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result/gapped_alignment/fubar,LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 90 taxa and 672 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C422
Taxon 2 -> C65
Taxon 3 -> C325
Taxon 4 -> C183
Taxon 5 -> C150
Taxon 6 -> C182
Taxon 7 -> C11
Taxon 8 -> C438
Taxon 9 -> C229
Taxon 10 -> C164
Taxon 11 -> C194
Taxon 12 -> C252
Taxon 13 -> C331
Taxon 14 -> C292
Taxon 15 -> C277
Taxon 16 -> C185
Taxon 17 -> C198
Taxon 18 -> C338
Taxon 19 -> C657
Taxon 20 -> C322
Taxon 21 -> C208
Taxon 22 -> C209
Taxon 23 -> C517
Taxon 24 -> C337
Taxon 25 -> C642
Taxon 26 -> C622
Taxon 27 -> C228
Taxon 28 -> C222
Taxon 29 -> C343
Taxon 30 -> C87
Taxon 31 -> C148
Taxon 32 -> C301
Taxon 33 -> C508
Taxon 34 -> C571
Taxon 35 -> C234
Taxon 36 -> C349
Taxon 37 -> C93
Taxon 38 -> C21
Taxon 39 -> C361
Taxon 40 -> C532
Taxon 41 -> C246
Taxon 42 -> C355
Taxon 43 -> C99
Taxon 44 -> C436
Taxon 45 -> C60
Taxon 46 -> C421
Taxon 47 -> C556
Taxon 48 -> C258
Taxon 49 -> C44
Taxon 50 -> C105
Taxon 51 -> C580
Taxon 52 -> C481
Taxon 53 -> C55
Taxon 54 -> C270
Taxon 55 -> C367
Taxon 56 -> C109
Taxon 57 -> C111
Taxon 58 -> C116
Taxon 59 -> C190
Taxon 60 -> C254
Taxon 61 -> C538
Taxon 62 -> C373
Taxon 63 -> C117
Taxon 64 -> C266
Taxon 65 -> C256
Taxon 66 -> C284
Taxon 67 -> C550
Taxon 68 -> C7
Taxon 69 -> C379
Taxon 70 -> C123
Taxon 71 -> C416
Taxon 72 -> C27
Taxon 73 -> C314
Taxon 74 -> C562
Taxon 75 -> C385
Taxon 76 -> C129
Taxon 77 -> C136
Taxon 78 -> C533
Taxon 79 -> C667
Taxon 80 -> C144
Taxon 81 -> C41
Taxon 82 -> C573
Taxon 83 -> C391
Taxon 84 -> C142
Taxon 85 -> C33
Taxon 86 -> C466
Taxon 87 -> C71
Taxon 88 -> C585
Taxon 89 -> C575
Taxon 90 -> C397
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668726000
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 811932385
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 0080012514
Seed = 1300082798
Swapseed = 1668726000
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 67 unique site patterns
Division 2 has 72 unique site patterns
Division 3 has 100 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -5673.118366 -- 149.597508
Chain 2 -- -5623.032426 -- 149.597508
Chain 3 -- -5475.874969 -- 149.597508
Chain 4 -- -5407.835692 -- 149.597508
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -5699.233705 -- 149.597508
Chain 2 -- -5617.591734 -- 149.597508
Chain 3 -- -5751.360111 -- 149.597508
Chain 4 -- -5489.718510 -- 149.597508
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-5673.118] (-5623.032) (-5475.875) (-5407.836) * [-5699.234] (-5617.592) (-5751.360) (-5489.719)
1000 -- (-4062.418) (-3782.082) [-3741.798] (-4010.501) * (-3913.545) [-3682.123] (-3932.414) (-3932.597) -- 0:49:57
2000 -- (-3463.829) [-3131.597] (-3477.859) (-3375.309) * (-3396.400) [-3160.097] (-3474.457) (-3353.769) -- 0:58:13
3000 -- (-3159.924) [-2969.725] (-3220.465) (-3144.699) * (-3136.099) [-2960.122] (-3221.409) (-2991.510) -- 0:55:23
4000 -- (-2965.592) [-2905.676] (-2986.054) (-3043.696) * (-2919.938) (-2913.863) (-2906.073) [-2880.295] -- 1:02:15
5000 -- (-2892.256) [-2797.506] (-2927.755) (-2971.940) * (-2800.722) (-2812.544) [-2736.324] (-2835.130) -- 0:59:42
Average standard deviation of split frequencies: 0.089606
6000 -- (-2863.082) [-2691.400] (-2756.195) (-2779.084) * (-2696.992) (-2710.108) [-2658.149] (-2754.411) -- 0:57:59
7000 -- (-2837.993) [-2645.154] (-2691.901) (-2727.253) * (-2614.562) (-2635.407) [-2615.480] (-2710.643) -- 0:59:06
8000 -- (-2777.299) (-2641.147) [-2594.249] (-2683.561) * [-2597.917] (-2639.207) (-2627.533) (-2683.236) -- 0:57:52
9000 -- (-2739.467) (-2616.298) [-2572.729] (-2658.974) * [-2591.052] (-2624.290) (-2613.085) (-2702.670) -- 0:56:53
10000 -- (-2684.149) (-2597.246) [-2561.944] (-2684.579) * [-2583.752] (-2612.959) (-2618.047) (-2654.603) -- 0:57:45
Average standard deviation of split frequencies: 0.111494
11000 -- (-2643.910) (-2579.603) [-2555.302] (-2651.720) * [-2555.394] (-2594.845) (-2612.355) (-2651.883) -- 0:56:56
12000 -- (-2653.423) [-2574.973] (-2575.336) (-2665.127) * [-2556.243] (-2588.448) (-2619.264) (-2650.737) -- 0:57:38
13000 -- (-2618.739) (-2598.723) [-2571.203] (-2662.508) * [-2559.035] (-2607.387) (-2607.719) (-2627.524) -- 0:56:56
14000 -- (-2608.128) [-2572.879] (-2581.570) (-2686.303) * [-2549.183] (-2588.107) (-2636.895) (-2629.150) -- 0:56:20
15000 -- (-2583.553) [-2559.621] (-2583.031) (-2668.550) * [-2553.024] (-2564.760) (-2605.554) (-2643.553) -- 0:55:49
Average standard deviation of split frequencies: 0.113993
16000 -- [-2571.502] (-2590.745) (-2570.497) (-2638.429) * (-2584.350) [-2540.620] (-2595.009) (-2636.216) -- 0:56:22
17000 -- (-2565.381) (-2584.228) [-2560.956] (-2639.098) * (-2566.506) [-2541.701] (-2590.021) (-2655.810) -- 0:55:53
18000 -- (-2578.370) (-2591.002) [-2568.791] (-2631.374) * (-2574.405) [-2537.807] (-2581.184) (-2638.290) -- 0:55:27
19000 -- (-2557.578) [-2556.218] (-2566.422) (-2649.501) * (-2573.351) [-2532.472] (-2567.947) (-2632.441) -- 0:55:04
20000 -- [-2544.890] (-2556.818) (-2565.604) (-2623.548) * (-2550.759) [-2542.583] (-2583.571) (-2655.244) -- 0:55:32
Average standard deviation of split frequencies: 0.110167
21000 -- [-2552.244] (-2563.701) (-2556.171) (-2617.146) * (-2566.233) [-2536.399] (-2585.821) (-2639.728) -- 0:55:09
22000 -- (-2568.731) [-2584.804] (-2553.226) (-2625.127) * (-2565.421) [-2537.429] (-2582.949) (-2617.939) -- 0:55:34
23000 -- (-2563.809) (-2608.894) [-2542.643] (-2628.909) * (-2567.222) [-2524.608] (-2583.022) (-2623.801) -- 0:55:13
24000 -- (-2565.800) (-2594.926) [-2546.719] (-2638.981) * (-2569.541) [-2535.776] (-2590.763) (-2630.761) -- 0:55:34
25000 -- [-2571.683] (-2590.511) (-2558.288) (-2602.961) * (-2567.208) [-2536.644] (-2579.530) (-2655.271) -- 0:55:15
Average standard deviation of split frequencies: 0.094946
26000 -- (-2572.074) (-2600.482) [-2553.915] (-2623.851) * (-2571.825) [-2535.309] (-2598.276) (-2626.607) -- 0:55:34
27000 -- (-2552.115) (-2611.615) [-2547.759] (-2604.336) * [-2556.718] (-2551.229) (-2603.802) (-2623.375) -- 0:55:15
28000 -- (-2557.033) (-2590.330) [-2544.915] (-2611.792) * (-2556.236) [-2559.353] (-2582.035) (-2630.554) -- 0:54:57
29000 -- (-2560.638) (-2610.346) [-2555.892] (-2597.698) * (-2572.514) [-2556.722] (-2600.877) (-2617.025) -- 0:55:14
30000 -- (-2566.841) (-2597.839) [-2561.726] (-2598.204) * [-2571.565] (-2556.494) (-2601.022) (-2623.661) -- 0:54:58
Average standard deviation of split frequencies: 0.086530
31000 -- (-2557.925) (-2587.282) [-2552.183] (-2603.729) * [-2556.494] (-2573.128) (-2596.848) (-2576.954) -- 0:54:42
32000 -- (-2562.428) (-2594.898) [-2528.644] (-2602.441) * (-2551.064) (-2566.313) (-2601.460) [-2547.162] -- 0:54:57
33000 -- (-2565.365) (-2584.399) [-2548.738] (-2581.620) * (-2563.829) (-2554.143) (-2592.087) [-2555.989] -- 0:54:41
34000 -- (-2573.944) (-2575.345) [-2538.038] (-2591.470) * (-2564.384) [-2543.655] (-2577.322) (-2561.863) -- 0:55:24
35000 -- (-2585.033) (-2560.284) [-2535.329] (-2612.357) * [-2547.378] (-2548.542) (-2582.081) (-2552.332) -- 0:56:03
Average standard deviation of split frequencies: 0.077524
36000 -- (-2584.903) (-2552.456) [-2534.870] (-2593.460) * [-2537.946] (-2581.665) (-2581.379) (-2562.975) -- 0:56:14
37000 -- (-2593.219) (-2576.285) [-2533.528] (-2594.585) * [-2546.909] (-2597.262) (-2576.473) (-2549.510) -- 0:55:57
38000 -- (-2577.642) (-2570.008) [-2527.574] (-2631.675) * [-2544.136] (-2593.558) (-2579.444) (-2551.422) -- 0:55:41
39000 -- (-2553.598) (-2551.510) [-2536.000] (-2635.223) * (-2540.190) (-2592.485) (-2575.301) [-2559.460] -- 0:55:26
40000 -- [-2534.483] (-2577.516) (-2526.685) (-2614.510) * [-2522.515] (-2607.844) (-2585.211) (-2574.750) -- 0:55:36
Average standard deviation of split frequencies: 0.075569
41000 -- (-2550.439) (-2623.817) [-2542.227] (-2591.026) * [-2537.421] (-2572.195) (-2592.062) (-2586.372) -- 0:55:21
42000 -- (-2561.345) (-2583.308) [-2532.850] (-2602.204) * [-2548.677] (-2607.097) (-2574.383) (-2576.313) -- 0:55:30
43000 -- (-2540.895) (-2605.399) [-2519.374] (-2588.006) * [-2551.993] (-2610.502) (-2570.823) (-2567.281) -- 0:55:16
44000 -- [-2553.693] (-2591.833) (-2547.217) (-2597.130) * (-2555.377) (-2591.453) (-2534.168) [-2558.438] -- 0:55:02
45000 -- [-2541.740] (-2622.961) (-2544.335) (-2586.915) * (-2558.808) (-2593.915) [-2543.615] (-2573.625) -- 0:55:10
Average standard deviation of split frequencies: 0.072608
46000 -- (-2543.827) (-2636.132) [-2527.810] (-2579.681) * [-2554.940] (-2583.559) (-2539.326) (-2588.157) -- 0:54:57
47000 -- (-2560.039) (-2620.438) [-2530.022] (-2559.138) * [-2538.843] (-2594.866) (-2548.988) (-2557.437) -- 0:55:25
48000 -- (-2562.739) (-2588.423) [-2539.070] (-2568.040) * (-2557.512) (-2600.140) (-2549.306) [-2549.313] -- 0:55:51
49000 -- [-2535.906] (-2608.941) (-2545.801) (-2561.220) * [-2536.907] (-2599.541) (-2535.288) (-2547.347) -- 0:56:17
50000 -- [-2531.750] (-2577.993) (-2535.508) (-2574.517) * [-2537.612] (-2590.581) (-2535.963) (-2566.875) -- 0:57:00
Average standard deviation of split frequencies: 0.075378
51000 -- [-2532.775] (-2577.334) (-2539.590) (-2561.508) * [-2546.715] (-2593.715) (-2559.009) (-2556.074) -- 0:57:22
52000 -- [-2552.081] (-2564.299) (-2546.388) (-2580.644) * (-2556.590) (-2592.509) [-2557.356] (-2556.937) -- 0:57:43
53000 -- (-2554.136) (-2575.450) [-2532.641] (-2594.094) * (-2565.818) (-2595.552) (-2575.815) [-2534.807] -- 0:58:04
54000 -- (-2553.108) (-2597.116) [-2546.849] (-2582.523) * [-2549.370] (-2577.248) (-2599.376) (-2536.270) -- 0:58:23
55000 -- [-2520.966] (-2578.686) (-2554.602) (-2577.948) * [-2550.346] (-2569.033) (-2610.337) (-2546.372) -- 0:58:42
Average standard deviation of split frequencies: 0.075833
56000 -- [-2511.238] (-2579.798) (-2555.976) (-2591.288) * (-2558.280) [-2563.431] (-2590.110) (-2530.961) -- 0:59:00
57000 -- (-2521.065) (-2583.332) [-2553.965] (-2593.995) * (-2584.668) [-2562.939] (-2587.116) (-2547.558) -- 0:59:16
58000 -- [-2542.990] (-2567.979) (-2554.277) (-2602.473) * (-2587.606) (-2571.320) (-2575.010) [-2541.469] -- 0:59:33
59000 -- [-2527.988] (-2601.873) (-2553.866) (-2577.115) * (-2572.571) (-2582.245) (-2577.822) [-2542.477] -- 0:59:48
60000 -- [-2534.741] (-2611.271) (-2553.071) (-2582.869) * (-2586.215) (-2582.555) (-2589.015) [-2546.753] -- 1:00:03
Average standard deviation of split frequencies: 0.076555
61000 -- (-2529.531) (-2593.847) [-2539.497] (-2588.190) * (-2610.328) [-2542.570] (-2576.192) (-2552.291) -- 1:00:17
62000 -- [-2514.345] (-2605.592) (-2547.972) (-2580.023) * (-2600.916) [-2551.130] (-2560.600) (-2548.233) -- 1:00:30
63000 -- [-2528.334] (-2599.031) (-2539.626) (-2594.641) * (-2582.227) (-2548.190) [-2541.073] (-2546.310) -- 1:00:58
64000 -- [-2522.408] (-2609.099) (-2542.519) (-2589.772) * (-2610.041) (-2555.861) (-2563.281) [-2539.384] -- 1:01:10
65000 -- (-2545.184) (-2615.162) [-2542.339] (-2607.278) * (-2568.270) [-2558.120] (-2546.900) (-2561.550) -- 1:01:22
Average standard deviation of split frequencies: 0.072889
66000 -- [-2538.558] (-2601.997) (-2536.719) (-2613.962) * (-2561.778) [-2553.884] (-2546.012) (-2590.702) -- 1:01:33
67000 -- [-2535.963] (-2589.847) (-2533.417) (-2603.636) * [-2549.583] (-2575.967) (-2541.907) (-2580.754) -- 1:01:44
68000 -- (-2542.191) (-2596.982) [-2532.467] (-2598.891) * (-2546.096) (-2566.631) [-2536.355] (-2607.253) -- 1:01:54
69000 -- (-2524.199) (-2589.642) [-2535.317] (-2610.223) * (-2539.712) (-2576.250) [-2551.315] (-2560.380) -- 1:02:04
70000 -- (-2530.927) (-2588.337) [-2528.697] (-2616.274) * [-2548.889] (-2577.127) (-2565.572) (-2603.751) -- 1:02:13
Average standard deviation of split frequencies: 0.078368
71000 -- (-2529.430) (-2592.552) [-2533.574] (-2593.418) * [-2541.671] (-2554.078) (-2555.692) (-2609.584) -- 1:02:09
72000 -- [-2523.563] (-2587.976) (-2552.822) (-2595.182) * (-2563.010) (-2550.683) [-2557.601] (-2589.684) -- 1:02:04
73000 -- [-2525.209] (-2592.793) (-2555.034) (-2616.379) * [-2564.237] (-2553.308) (-2566.409) (-2602.706) -- 1:01:48
74000 -- (-2533.317) (-2580.707) [-2571.298] (-2616.133) * [-2544.538] (-2569.122) (-2555.858) (-2591.716) -- 1:01:31
75000 -- (-2527.465) (-2573.319) [-2560.509] (-2613.911) * (-2552.574) [-2571.730] (-2571.824) (-2587.679) -- 1:01:27
Average standard deviation of split frequencies: 0.076688
76000 -- [-2532.067] (-2553.948) (-2557.338) (-2611.849) * (-2543.417) [-2564.290] (-2550.154) (-2579.377) -- 1:01:11
77000 -- [-2524.855] (-2547.472) (-2549.828) (-2598.958) * (-2546.346) [-2563.882] (-2562.170) (-2589.252) -- 1:01:08
78000 -- (-2554.495) (-2552.471) [-2540.994] (-2598.403) * [-2546.246] (-2557.616) (-2575.359) (-2599.867) -- 1:00:52
79000 -- (-2561.129) [-2541.436] (-2548.265) (-2586.139) * [-2543.635] (-2560.263) (-2562.514) (-2620.761) -- 1:00:49
80000 -- [-2553.782] (-2549.971) (-2554.729) (-2589.311) * (-2542.506) [-2562.449] (-2566.623) (-2599.384) -- 1:00:34
Average standard deviation of split frequencies: 0.078968
81000 -- (-2538.476) (-2574.128) [-2534.879] (-2617.515) * [-2539.931] (-2584.262) (-2572.245) (-2627.070) -- 1:00:19
82000 -- [-2531.032] (-2555.010) (-2548.104) (-2622.709) * [-2549.587] (-2564.846) (-2590.101) (-2612.874) -- 1:00:16
83000 -- (-2536.815) (-2573.327) [-2548.562] (-2615.735) * (-2542.491) [-2563.041] (-2586.850) (-2603.936) -- 1:00:01
84000 -- (-2541.138) (-2589.860) [-2542.950] (-2596.571) * (-2561.871) [-2546.884] (-2556.275) (-2603.941) -- 0:59:47
85000 -- (-2558.036) (-2565.009) [-2541.821] (-2585.023) * [-2547.998] (-2567.424) (-2561.973) (-2609.347) -- 0:59:44
Average standard deviation of split frequencies: 0.078493
86000 -- (-2567.337) (-2571.775) [-2545.466] (-2616.196) * [-2549.367] (-2570.492) (-2562.725) (-2608.693) -- 0:59:30
87000 -- [-2552.234] (-2559.925) (-2550.635) (-2593.780) * (-2550.914) [-2564.999] (-2561.263) (-2597.225) -- 0:59:17
88000 -- [-2537.620] (-2572.882) (-2556.048) (-2629.625) * (-2554.122) (-2555.397) [-2549.776] (-2580.601) -- 0:59:14
89000 -- (-2562.395) (-2572.467) [-2544.331] (-2625.296) * (-2567.775) (-2561.212) [-2558.591] (-2567.789) -- 0:59:01
90000 -- (-2564.405) (-2573.835) [-2547.225] (-2611.567) * (-2561.792) (-2562.270) [-2559.867] (-2576.424) -- 0:58:48
Average standard deviation of split frequencies: 0.079073
91000 -- (-2573.672) (-2575.420) [-2529.466] (-2618.977) * (-2563.096) (-2560.802) [-2556.843] (-2585.075) -- 0:58:46
92000 -- (-2575.191) (-2588.791) [-2536.041] (-2607.244) * (-2555.592) (-2574.944) [-2551.481] (-2616.679) -- 0:58:33
93000 -- (-2558.457) (-2602.011) [-2541.816] (-2598.656) * (-2551.594) (-2568.195) [-2545.037] (-2594.018) -- 0:58:21
94000 -- (-2556.565) (-2583.935) [-2518.257] (-2617.696) * [-2532.772] (-2554.234) (-2553.519) (-2605.611) -- 0:58:09
95000 -- (-2574.204) (-2588.107) [-2553.585] (-2603.086) * [-2545.636] (-2567.550) (-2554.695) (-2596.771) -- 0:58:06
Average standard deviation of split frequencies: 0.082093
96000 -- (-2562.567) (-2562.518) [-2531.734] (-2598.333) * (-2542.118) (-2581.069) [-2548.106] (-2589.622) -- 0:58:04
97000 -- (-2555.092) (-2576.394) [-2531.633] (-2617.153) * [-2543.368] (-2599.046) (-2568.581) (-2605.161) -- 0:58:20
98000 -- (-2560.470) (-2568.595) [-2529.403] (-2609.760) * (-2555.693) (-2574.400) [-2542.359] (-2591.864) -- 0:58:26
99000 -- (-2556.104) (-2549.903) [-2539.076] (-2616.515) * [-2552.192] (-2556.390) (-2559.818) (-2605.254) -- 0:58:32
100000 -- [-2557.758] (-2559.130) (-2566.448) (-2606.059) * (-2568.389) [-2547.867] (-2572.279) (-2607.395) -- 0:58:39
Average standard deviation of split frequencies: 0.081990
101000 -- (-2581.513) [-2554.551] (-2557.774) (-2596.729) * (-2561.823) (-2544.359) [-2545.508] (-2602.213) -- 0:58:44
102000 -- (-2564.050) (-2568.345) [-2552.580] (-2595.343) * (-2562.174) [-2550.843] (-2539.945) (-2596.605) -- 0:58:50
103000 -- (-2553.843) [-2539.098] (-2549.969) (-2586.662) * (-2588.132) (-2563.130) [-2531.185] (-2564.314) -- 0:58:55
104000 -- (-2552.039) (-2572.804) [-2550.716] (-2586.184) * (-2582.804) (-2565.781) [-2530.673] (-2545.181) -- 0:59:00
105000 -- [-2537.316] (-2563.808) (-2544.943) (-2599.817) * (-2571.421) (-2579.532) [-2551.142] (-2544.163) -- 0:59:05
Average standard deviation of split frequencies: 0.074924
106000 -- [-2539.144] (-2569.110) (-2558.436) (-2574.984) * (-2571.100) (-2594.601) (-2539.635) [-2535.609] -- 0:59:10
107000 -- [-2525.984] (-2573.451) (-2559.905) (-2589.687) * (-2607.918) (-2577.246) (-2548.405) [-2534.450] -- 0:59:15
108000 -- (-2539.677) (-2580.075) [-2531.167] (-2627.498) * (-2569.691) (-2573.376) (-2558.996) [-2541.163] -- 0:59:03
109000 -- [-2541.972] (-2559.872) (-2556.788) (-2594.972) * (-2582.188) (-2590.334) (-2538.014) [-2552.722] -- 0:58:59
110000 -- (-2548.061) (-2579.312) [-2546.648] (-2585.363) * (-2599.184) (-2593.301) (-2539.995) [-2543.836] -- 0:58:47
Average standard deviation of split frequencies: 0.076055
111000 -- (-2545.925) (-2579.205) [-2545.728] (-2569.535) * (-2580.035) (-2610.112) [-2533.536] (-2551.721) -- 0:58:35
112000 -- [-2545.369] (-2578.580) (-2562.977) (-2576.163) * (-2584.583) (-2569.904) [-2547.077] (-2553.058) -- 0:58:32
113000 -- [-2519.323] (-2570.473) (-2555.749) (-2614.564) * [-2567.570] (-2597.428) (-2556.023) (-2551.738) -- 0:58:20
114000 -- [-2531.082] (-2565.934) (-2555.960) (-2619.288) * (-2568.298) (-2595.000) [-2550.263] (-2540.723) -- 0:58:09
115000 -- [-2543.962] (-2584.813) (-2563.044) (-2616.729) * (-2552.438) (-2593.822) [-2545.100] (-2537.639) -- 0:58:06
Average standard deviation of split frequencies: 0.077320
116000 -- [-2545.884] (-2562.240) (-2556.534) (-2638.476) * (-2562.304) (-2593.511) (-2545.041) [-2533.084] -- 0:57:55
117000 -- (-2564.283) (-2554.088) [-2544.646] (-2617.160) * (-2576.522) (-2579.464) (-2544.726) [-2532.325] -- 0:57:44
118000 -- (-2557.385) (-2564.338) [-2540.536] (-2621.921) * (-2583.927) (-2574.645) (-2545.583) [-2547.366] -- 0:57:40
119000 -- [-2548.896] (-2568.103) (-2546.092) (-2617.448) * (-2584.565) [-2565.585] (-2554.449) (-2562.710) -- 0:57:29
120000 -- [-2534.735] (-2551.511) (-2564.192) (-2625.782) * (-2585.135) (-2573.535) (-2571.514) [-2552.053] -- 0:57:26
Average standard deviation of split frequencies: 0.076435
121000 -- [-2528.022] (-2556.254) (-2573.246) (-2616.539) * (-2569.661) (-2565.358) (-2569.891) [-2549.420] -- 0:57:16
122000 -- [-2532.044] (-2583.623) (-2557.786) (-2611.708) * (-2559.225) (-2570.790) (-2581.989) [-2552.990] -- 0:57:05
123000 -- [-2519.516] (-2573.935) (-2573.241) (-2588.624) * [-2546.090] (-2568.557) (-2580.266) (-2557.347) -- 0:57:02
124000 -- [-2513.475] (-2607.889) (-2563.449) (-2590.828) * [-2537.273] (-2554.314) (-2597.202) (-2578.539) -- 0:56:52
125000 -- [-2520.606] (-2600.895) (-2570.948) (-2588.947) * [-2539.417] (-2564.379) (-2586.252) (-2572.973) -- 0:56:49
Average standard deviation of split frequencies: 0.069121
126000 -- [-2519.397] (-2572.385) (-2545.579) (-2579.057) * [-2540.463] (-2556.686) (-2561.153) (-2571.695) -- 0:56:38
127000 -- [-2536.806] (-2592.621) (-2554.299) (-2583.664) * (-2544.024) (-2556.038) (-2590.072) [-2554.212] -- 0:56:28
128000 -- [-2537.011] (-2587.191) (-2562.644) (-2574.631) * (-2551.138) [-2550.010] (-2609.456) (-2549.998) -- 0:56:25
129000 -- [-2530.413] (-2597.718) (-2573.225) (-2563.486) * [-2539.888] (-2539.874) (-2603.341) (-2570.569) -- 0:56:15
130000 -- [-2529.255] (-2578.990) (-2573.607) (-2588.559) * [-2554.427] (-2535.792) (-2595.568) (-2568.693) -- 0:56:12
Average standard deviation of split frequencies: 0.068418
131000 -- [-2533.115] (-2558.349) (-2579.761) (-2600.949) * (-2558.262) [-2544.885] (-2593.600) (-2569.130) -- 0:56:03
132000 -- [-2527.785] (-2554.576) (-2573.763) (-2588.854) * (-2555.798) [-2539.245] (-2589.379) (-2580.422) -- 0:55:53
133000 -- [-2540.364] (-2544.366) (-2556.398) (-2595.995) * (-2539.967) [-2548.498] (-2573.508) (-2586.712) -- 0:55:44
134000 -- [-2542.212] (-2560.942) (-2557.947) (-2599.623) * [-2517.054] (-2543.213) (-2587.956) (-2579.756) -- 0:55:41
135000 -- (-2561.098) [-2530.399] (-2570.877) (-2606.805) * (-2527.707) [-2535.915] (-2567.170) (-2609.265) -- 0:55:31
Average standard deviation of split frequencies: 0.064944
136000 -- (-2572.499) [-2533.528] (-2553.271) (-2634.413) * [-2521.748] (-2535.244) (-2563.481) (-2594.921) -- 0:55:22
137000 -- (-2549.625) (-2558.782) [-2540.768] (-2604.288) * [-2529.908] (-2539.641) (-2583.160) (-2572.340) -- 0:55:19
138000 -- [-2555.684] (-2558.563) (-2553.404) (-2601.008) * [-2529.046] (-2555.751) (-2594.706) (-2554.306) -- 0:55:10
139000 -- [-2525.875] (-2580.548) (-2561.584) (-2599.456) * (-2523.411) (-2566.800) (-2595.069) [-2559.547] -- 0:55:07
140000 -- [-2533.522] (-2587.254) (-2556.377) (-2597.160) * [-2547.231] (-2595.223) (-2564.849) (-2570.782) -- 0:54:58
Average standard deviation of split frequencies: 0.061582
141000 -- [-2516.764] (-2598.165) (-2568.094) (-2575.831) * [-2553.355] (-2591.638) (-2553.925) (-2568.721) -- 0:54:49
142000 -- [-2540.463] (-2619.767) (-2542.447) (-2584.896) * (-2558.166) (-2589.225) (-2557.147) [-2555.784] -- 0:54:46
143000 -- (-2528.798) (-2612.229) [-2540.581] (-2576.229) * [-2559.770] (-2580.306) (-2570.242) (-2563.593) -- 0:54:44
144000 -- [-2531.532] (-2621.387) (-2559.915) (-2590.783) * [-2543.663] (-2602.054) (-2546.874) (-2582.001) -- 0:54:35
145000 -- (-2544.455) (-2610.734) [-2550.007] (-2582.629) * [-2544.550] (-2585.140) (-2558.739) (-2559.348) -- 0:54:32
Average standard deviation of split frequencies: 0.056747
146000 -- [-2545.281] (-2599.931) (-2551.566) (-2566.854) * [-2542.633] (-2582.501) (-2550.603) (-2582.724) -- 0:54:23
147000 -- (-2550.105) (-2603.343) [-2540.079] (-2581.165) * (-2555.221) (-2585.189) [-2535.266] (-2568.326) -- 0:54:15
148000 -- (-2589.135) (-2611.762) [-2547.505] (-2576.584) * (-2544.066) (-2558.401) [-2549.557] (-2578.517) -- 0:54:06
149000 -- [-2579.693] (-2610.401) (-2549.303) (-2586.032) * (-2557.152) (-2580.625) [-2551.041] (-2571.111) -- 0:54:04
150000 -- (-2599.841) (-2593.822) [-2544.176] (-2602.700) * [-2555.649] (-2570.492) (-2574.506) (-2604.094) -- 0:53:55
Average standard deviation of split frequencies: 0.054185
151000 -- (-2602.034) (-2604.149) [-2551.024] (-2603.180) * (-2568.906) (-2561.542) [-2561.900] (-2559.678) -- 0:53:47
152000 -- (-2579.260) (-2597.089) [-2540.338] (-2567.805) * (-2579.302) (-2604.148) [-2557.938] (-2550.311) -- 0:53:44
153000 -- (-2568.697) (-2606.445) [-2551.998] (-2550.997) * (-2555.054) (-2592.065) (-2550.121) [-2537.952] -- 0:53:36
154000 -- (-2585.154) (-2609.477) [-2546.163] (-2554.940) * (-2562.013) (-2608.717) [-2554.617] (-2537.127) -- 0:53:33
155000 -- (-2586.805) (-2614.772) [-2543.551] (-2557.717) * (-2570.434) (-2592.309) (-2558.719) [-2559.198] -- 0:53:25
Average standard deviation of split frequencies: 0.052981
156000 -- (-2592.222) (-2619.000) [-2531.378] (-2561.197) * (-2566.414) (-2571.129) [-2547.368] (-2558.077) -- 0:53:17
157000 -- (-2582.978) (-2580.889) [-2528.132] (-2593.378) * (-2599.544) (-2567.516) [-2554.415] (-2552.744) -- 0:53:09
158000 -- (-2559.745) (-2592.807) [-2525.084] (-2596.893) * (-2584.018) (-2576.352) (-2563.615) [-2561.810] -- 0:53:06
159000 -- (-2593.491) (-2605.968) [-2538.820] (-2586.941) * (-2569.611) (-2571.625) [-2560.639] (-2561.750) -- 0:52:58
160000 -- (-2559.041) (-2609.550) [-2540.858] (-2567.519) * (-2551.370) (-2602.981) [-2577.838] (-2564.090) -- 0:52:51
Average standard deviation of split frequencies: 0.052031
161000 -- (-2565.486) (-2573.111) [-2550.475] (-2562.641) * (-2541.098) [-2545.806] (-2578.804) (-2586.092) -- 0:52:48
162000 -- (-2563.040) (-2581.421) [-2549.177] (-2560.044) * [-2534.927] (-2547.532) (-2568.080) (-2562.879) -- 0:52:40
163000 -- (-2581.991) (-2602.082) [-2542.546] (-2556.586) * [-2556.898] (-2544.301) (-2576.637) (-2556.204) -- 0:52:32
164000 -- (-2595.225) (-2570.708) [-2538.792] (-2554.897) * [-2558.180] (-2548.756) (-2573.567) (-2555.891) -- 0:52:30
165000 -- (-2593.464) (-2562.734) [-2532.934] (-2561.391) * (-2576.956) [-2543.696] (-2570.183) (-2562.258) -- 0:52:22
Average standard deviation of split frequencies: 0.048719
166000 -- (-2600.231) (-2564.111) [-2549.794] (-2546.507) * (-2548.896) [-2542.456] (-2573.425) (-2553.141) -- 0:52:20
167000 -- (-2579.602) (-2565.517) [-2545.635] (-2574.468) * [-2546.467] (-2569.047) (-2546.859) (-2585.998) -- 0:52:12
168000 -- (-2584.297) (-2571.118) [-2539.228] (-2549.173) * [-2547.089] (-2572.597) (-2563.440) (-2573.786) -- 0:52:04
169000 -- (-2583.365) (-2577.822) [-2532.483] (-2559.533) * (-2550.829) (-2565.955) [-2543.963] (-2575.101) -- 0:52:02
170000 -- (-2579.367) (-2579.424) [-2529.226] (-2544.586) * (-2551.864) [-2542.288] (-2574.813) (-2557.165) -- 0:51:54
Average standard deviation of split frequencies: 0.047660
171000 -- (-2565.605) (-2573.911) [-2539.986] (-2540.831) * (-2557.545) (-2553.742) (-2563.024) [-2545.762] -- 0:51:52
172000 -- (-2553.675) (-2576.204) [-2543.395] (-2553.621) * (-2570.406) (-2554.704) (-2591.043) [-2532.171] -- 0:51:45
173000 -- [-2548.563] (-2601.565) (-2558.044) (-2572.161) * (-2568.612) (-2571.580) (-2614.260) [-2539.019] -- 0:51:37
174000 -- [-2544.155] (-2583.266) (-2577.579) (-2568.357) * [-2551.010] (-2577.456) (-2598.251) (-2554.952) -- 0:51:35
175000 -- [-2554.190] (-2582.940) (-2568.624) (-2579.555) * (-2559.211) (-2576.959) (-2593.059) [-2548.896] -- 0:51:27
Average standard deviation of split frequencies: 0.047064
176000 -- (-2550.771) (-2580.606) [-2562.767] (-2582.792) * [-2537.231] (-2565.580) (-2586.294) (-2538.334) -- 0:51:20
177000 -- (-2554.483) (-2580.166) [-2536.966] (-2573.120) * (-2533.389) (-2590.421) (-2566.359) [-2539.022] -- 0:51:18
178000 -- (-2577.873) (-2570.651) (-2551.977) [-2554.667] * (-2550.252) (-2552.191) (-2583.007) [-2534.755] -- 0:51:10
179000 -- (-2578.546) (-2583.728) (-2560.882) [-2542.087] * (-2556.488) (-2554.681) (-2578.725) [-2546.250] -- 0:51:03
180000 -- (-2585.544) (-2609.990) (-2573.453) [-2534.126] * (-2568.608) (-2552.011) (-2575.663) [-2545.094] -- 0:51:01
Average standard deviation of split frequencies: 0.044259
181000 -- (-2574.951) (-2616.126) (-2573.740) [-2534.782] * (-2564.093) (-2553.291) (-2589.153) [-2536.865] -- 0:50:54
182000 -- (-2571.220) (-2595.767) (-2554.744) [-2547.715] * (-2567.165) (-2547.570) (-2594.113) [-2543.308] -- 0:50:47
183000 -- (-2555.229) (-2607.177) [-2542.059] (-2562.323) * [-2541.869] (-2546.906) (-2596.011) (-2593.772) -- 0:50:44
184000 -- (-2560.525) (-2578.332) [-2534.886] (-2550.693) * [-2555.367] (-2553.061) (-2579.644) (-2576.726) -- 0:50:37
185000 -- (-2573.269) (-2595.819) [-2537.838] (-2572.242) * [-2552.477] (-2550.375) (-2596.845) (-2558.458) -- 0:50:30
Average standard deviation of split frequencies: 0.043370
186000 -- (-2584.507) (-2612.258) [-2535.728] (-2585.624) * (-2553.564) (-2552.516) (-2585.125) [-2553.494] -- 0:50:28
187000 -- (-2592.648) (-2612.629) [-2551.042] (-2559.318) * (-2540.256) (-2570.569) (-2596.899) [-2542.373] -- 0:50:21
188000 -- [-2559.090] (-2591.943) (-2573.458) (-2577.901) * (-2549.625) (-2584.437) (-2570.969) [-2542.729] -- 0:50:19
189000 -- (-2551.033) (-2607.032) [-2550.760] (-2573.198) * [-2558.705] (-2588.501) (-2572.491) (-2561.017) -- 0:50:12
190000 -- (-2552.060) (-2612.783) [-2548.574] (-2581.188) * (-2553.570) (-2585.204) (-2597.689) [-2541.961] -- 0:50:09
Average standard deviation of split frequencies: 0.042337
191000 -- (-2556.397) (-2605.197) [-2531.585] (-2573.331) * (-2550.350) (-2593.103) (-2601.754) [-2525.804] -- 0:50:03
192000 -- (-2577.407) (-2586.892) [-2547.062] (-2574.938) * (-2551.072) (-2579.151) (-2617.827) [-2522.542] -- 0:50:00
193000 -- (-2593.601) (-2572.019) [-2551.504] (-2585.305) * (-2561.283) (-2578.436) (-2594.031) [-2525.143] -- 0:49:53
194000 -- (-2592.099) (-2567.209) [-2545.578] (-2567.989) * [-2543.031] (-2578.872) (-2593.402) (-2550.262) -- 0:49:47
195000 -- (-2572.423) [-2549.821] (-2541.483) (-2581.334) * (-2555.611) (-2581.499) (-2584.779) [-2557.323] -- 0:49:44
Average standard deviation of split frequencies: 0.041149
196000 -- (-2567.305) (-2554.284) [-2534.701] (-2563.687) * [-2554.901] (-2571.047) (-2584.375) (-2542.132) -- 0:49:38
197000 -- (-2535.704) (-2583.821) [-2544.012] (-2571.394) * (-2546.731) (-2587.122) (-2573.165) [-2539.927] -- 0:49:35
198000 -- [-2536.971] (-2571.236) (-2577.071) (-2566.980) * [-2544.834] (-2600.565) (-2559.928) (-2539.085) -- 0:49:29
199000 -- [-2546.395] (-2583.957) (-2563.969) (-2587.096) * (-2553.258) (-2595.829) (-2564.260) [-2520.070] -- 0:49:22
200000 -- [-2542.752] (-2574.560) (-2563.751) (-2579.281) * (-2551.400) (-2584.209) (-2562.633) [-2532.442] -- 0:49:20
Average standard deviation of split frequencies: 0.040673
201000 -- [-2533.016] (-2575.325) (-2564.059) (-2582.914) * (-2557.923) (-2576.760) (-2587.254) [-2529.477] -- 0:49:13
202000 -- [-2525.846] (-2591.263) (-2565.372) (-2587.892) * (-2570.585) (-2602.367) (-2599.848) [-2538.985] -- 0:49:07
203000 -- [-2546.664] (-2583.355) (-2544.931) (-2598.640) * (-2575.533) (-2606.391) (-2602.873) [-2536.649] -- 0:49:04
204000 -- [-2536.351] (-2589.440) (-2559.556) (-2584.063) * (-2551.499) (-2596.955) (-2594.139) [-2535.444] -- 0:48:58
205000 -- [-2544.609] (-2579.406) (-2564.095) (-2601.911) * (-2548.656) (-2622.898) (-2582.435) [-2529.299] -- 0:48:51
Average standard deviation of split frequencies: 0.039628
206000 -- [-2543.556] (-2555.199) (-2586.616) (-2591.419) * [-2535.508] (-2620.066) (-2564.365) (-2539.516) -- 0:48:49
207000 -- [-2548.586] (-2548.067) (-2589.576) (-2576.070) * (-2538.213) (-2596.939) (-2551.518) [-2534.584] -- 0:48:42
208000 -- (-2560.892) [-2542.662] (-2603.259) (-2574.503) * (-2525.879) (-2590.398) (-2595.279) [-2527.363] -- 0:48:36
209000 -- (-2570.670) [-2531.417] (-2586.122) (-2579.573) * [-2525.173] (-2582.716) (-2597.648) (-2543.632) -- 0:48:34
210000 -- (-2566.476) [-2536.210] (-2574.872) (-2578.289) * [-2533.053] (-2580.491) (-2590.306) (-2560.581) -- 0:48:27
Average standard deviation of split frequencies: 0.038901
211000 -- (-2560.365) [-2547.325] (-2567.980) (-2575.206) * [-2552.718] (-2591.772) (-2602.943) (-2556.874) -- 0:48:25
212000 -- (-2574.066) [-2544.091] (-2561.612) (-2585.274) * [-2556.697] (-2596.141) (-2613.214) (-2568.131) -- 0:48:19
213000 -- (-2594.237) [-2523.318] (-2560.347) (-2550.817) * [-2548.792] (-2591.895) (-2608.209) (-2566.466) -- 0:48:13
214000 -- (-2585.821) [-2527.953] (-2595.395) (-2555.295) * [-2539.912] (-2616.435) (-2580.983) (-2563.530) -- 0:48:10
215000 -- (-2558.204) [-2534.196] (-2609.586) (-2563.086) * [-2558.650] (-2616.817) (-2583.942) (-2572.718) -- 0:48:04
Average standard deviation of split frequencies: 0.037101
216000 -- [-2554.308] (-2547.337) (-2569.030) (-2586.207) * [-2557.831] (-2571.697) (-2573.503) (-2568.627) -- 0:47:58
217000 -- (-2552.004) (-2561.852) [-2551.077] (-2604.159) * [-2544.470] (-2582.290) (-2587.548) (-2569.329) -- 0:47:55
218000 -- [-2540.377] (-2563.381) (-2560.210) (-2586.923) * [-2552.504] (-2598.138) (-2581.656) (-2550.540) -- 0:47:49
219000 -- [-2541.483] (-2571.711) (-2565.343) (-2594.313) * [-2544.392] (-2607.476) (-2580.084) (-2574.028) -- 0:47:43
220000 -- [-2554.454] (-2582.987) (-2561.903) (-2594.202) * [-2552.695] (-2591.723) (-2569.154) (-2573.969) -- 0:47:41
Average standard deviation of split frequencies: 0.036631
221000 -- (-2576.520) (-2574.242) [-2564.240] (-2569.384) * [-2534.586] (-2597.523) (-2566.412) (-2563.731) -- 0:47:35
222000 -- (-2554.086) (-2555.165) [-2574.792] (-2599.514) * [-2527.423] (-2593.632) (-2567.064) (-2568.156) -- 0:47:29
223000 -- [-2549.174] (-2571.110) (-2596.987) (-2594.127) * [-2534.648] (-2599.068) (-2556.440) (-2545.721) -- 0:47:26
224000 -- [-2545.602] (-2564.338) (-2600.617) (-2590.217) * [-2523.833] (-2613.448) (-2566.043) (-2552.685) -- 0:47:20
225000 -- [-2528.532] (-2590.334) (-2608.881) (-2572.528) * [-2516.439] (-2618.549) (-2582.879) (-2546.996) -- 0:47:14
Average standard deviation of split frequencies: 0.035723
226000 -- [-2549.472] (-2614.111) (-2575.731) (-2568.465) * [-2515.188] (-2592.104) (-2579.045) (-2541.618) -- 0:47:12
227000 -- [-2550.698] (-2590.902) (-2581.932) (-2561.741) * [-2522.771] (-2581.687) (-2567.895) (-2569.548) -- 0:47:13
228000 -- (-2547.223) (-2590.243) (-2591.452) [-2560.477] * [-2531.432] (-2571.964) (-2541.805) (-2562.932) -- 0:47:14
229000 -- [-2551.205] (-2575.717) (-2567.014) (-2571.973) * [-2540.984] (-2608.951) (-2561.227) (-2572.222) -- 0:47:14
230000 -- [-2560.328] (-2565.309) (-2569.976) (-2577.631) * [-2547.637] (-2593.885) (-2550.151) (-2584.556) -- 0:47:08
Average standard deviation of split frequencies: 0.034723
231000 -- (-2568.803) (-2584.855) [-2556.959] (-2578.199) * [-2551.499] (-2579.222) (-2565.953) (-2550.969) -- 0:47:06
232000 -- [-2555.318] (-2583.644) (-2549.291) (-2577.035) * (-2555.618) (-2551.924) (-2546.520) [-2550.702] -- 0:47:00
233000 -- [-2540.685] (-2589.714) (-2556.847) (-2585.052) * [-2546.675] (-2559.391) (-2563.541) (-2540.585) -- 0:46:57
234000 -- (-2550.012) (-2592.774) [-2536.127] (-2597.864) * [-2551.049] (-2585.053) (-2574.434) (-2551.964) -- 0:46:51
235000 -- (-2561.855) (-2600.882) [-2545.900] (-2595.914) * [-2534.847] (-2575.848) (-2550.138) (-2557.118) -- 0:46:46
Average standard deviation of split frequencies: 0.034836
236000 -- (-2561.050) (-2609.808) [-2535.023] (-2585.941) * (-2547.067) (-2561.969) [-2542.705] (-2544.557) -- 0:46:43
237000 -- [-2546.170] (-2599.874) (-2570.428) (-2567.062) * [-2561.800] (-2599.449) (-2545.490) (-2559.234) -- 0:46:37
238000 -- [-2556.571] (-2596.239) (-2565.954) (-2560.170) * (-2567.036) (-2612.213) [-2552.307] (-2564.536) -- 0:46:35
239000 -- (-2579.534) (-2582.643) (-2571.408) [-2552.647] * (-2569.842) (-2612.057) [-2549.085] (-2590.468) -- 0:46:29
240000 -- [-2562.186] (-2592.847) (-2569.105) (-2587.497) * (-2568.104) (-2605.388) [-2545.196] (-2573.460) -- 0:46:23
Average standard deviation of split frequencies: 0.034938
241000 -- [-2557.703] (-2586.040) (-2562.306) (-2571.160) * (-2554.736) (-2594.885) [-2557.458] (-2569.212) -- 0:46:20
242000 -- [-2572.523] (-2608.330) (-2564.833) (-2571.634) * [-2539.578] (-2600.077) (-2574.497) (-2556.441) -- 0:46:15
243000 -- (-2573.426) (-2604.777) [-2553.349] (-2570.048) * [-2552.622] (-2593.055) (-2560.803) (-2560.326) -- 0:46:12
244000 -- (-2550.766) (-2575.461) [-2553.265] (-2589.636) * [-2535.390] (-2603.181) (-2569.265) (-2546.440) -- 0:46:06
245000 -- (-2560.762) (-2592.125) [-2548.803] (-2585.516) * (-2550.967) (-2621.626) (-2544.179) [-2526.369] -- 0:46:01
Average standard deviation of split frequencies: 0.034742
246000 -- (-2558.282) (-2595.624) [-2548.816] (-2571.893) * (-2555.432) (-2604.445) (-2539.239) [-2530.954] -- 0:45:58
247000 -- (-2569.014) (-2590.787) [-2537.990] (-2558.903) * (-2556.203) (-2629.701) (-2540.629) [-2528.959] -- 0:45:52
248000 -- (-2612.262) (-2583.932) [-2548.521] (-2560.827) * (-2571.815) (-2608.527) [-2535.762] (-2559.761) -- 0:45:47
249000 -- (-2592.428) (-2575.291) [-2531.758] (-2548.864) * (-2571.999) (-2628.713) [-2539.704] (-2547.999) -- 0:45:41
250000 -- (-2567.546) (-2580.694) [-2534.679] (-2561.605) * [-2537.565] (-2604.235) (-2551.229) (-2559.587) -- 0:45:39
Average standard deviation of split frequencies: 0.035080
251000 -- (-2587.635) (-2602.429) [-2541.459] (-2558.434) * (-2560.142) (-2606.998) (-2563.253) [-2563.719] -- 0:45:33
252000 -- (-2582.438) (-2583.080) [-2527.069] (-2553.694) * (-2559.700) (-2580.755) (-2556.910) [-2546.596] -- 0:45:30
253000 -- (-2585.173) (-2593.773) [-2543.736] (-2544.536) * (-2578.568) (-2592.306) (-2565.761) [-2541.940] -- 0:45:25
254000 -- (-2593.930) (-2604.566) [-2544.369] (-2545.789) * (-2572.335) (-2580.350) (-2556.362) [-2561.249] -- 0:45:19
255000 -- (-2559.378) (-2597.914) [-2547.465] (-2547.700) * (-2597.100) (-2579.779) (-2569.627) [-2559.815] -- 0:45:17
Average standard deviation of split frequencies: 0.034615
256000 -- (-2570.952) (-2602.201) [-2548.119] (-2551.553) * (-2597.468) (-2569.981) (-2553.306) [-2546.715] -- 0:45:11
257000 -- (-2551.917) (-2595.721) [-2526.893] (-2556.512) * (-2580.149) (-2567.521) (-2558.902) [-2528.476] -- 0:45:08
258000 -- [-2538.375] (-2597.806) (-2533.779) (-2593.595) * (-2592.258) (-2576.217) (-2562.550) [-2536.453] -- 0:45:03
259000 -- [-2543.969] (-2598.824) (-2552.945) (-2572.009) * (-2609.185) (-2570.960) (-2576.708) [-2529.742] -- 0:44:57
260000 -- (-2559.355) (-2593.043) [-2557.438] (-2574.581) * (-2588.153) (-2559.215) (-2567.574) [-2540.110] -- 0:44:55
Average standard deviation of split frequencies: 0.036224
261000 -- [-2570.215] (-2590.110) (-2582.731) (-2558.620) * (-2595.180) (-2559.207) [-2555.547] (-2537.609) -- 0:44:49
262000 -- (-2561.742) (-2597.648) [-2552.610] (-2570.274) * (-2534.504) (-2593.728) (-2558.623) [-2559.028] -- 0:44:47
263000 -- (-2554.602) (-2561.386) [-2551.720] (-2569.923) * [-2529.978] (-2607.073) (-2558.924) (-2556.147) -- 0:44:41
264000 -- (-2560.575) (-2570.955) [-2541.053] (-2567.275) * [-2529.179] (-2596.141) (-2559.545) (-2546.128) -- 0:44:36
265000 -- (-2560.986) (-2566.702) [-2547.918] (-2570.694) * [-2536.070] (-2597.091) (-2564.702) (-2562.611) -- 0:44:33
Average standard deviation of split frequencies: 0.034635
266000 -- (-2552.827) [-2563.548] (-2566.030) (-2573.339) * [-2533.443] (-2614.109) (-2588.619) (-2570.726) -- 0:44:28
267000 -- (-2546.222) [-2556.444] (-2565.901) (-2576.712) * [-2544.014] (-2595.466) (-2586.032) (-2545.320) -- 0:44:25
268000 -- (-2544.815) [-2556.835] (-2575.385) (-2566.252) * [-2537.915] (-2595.026) (-2570.444) (-2555.039) -- 0:44:20
269000 -- [-2543.833] (-2543.289) (-2596.576) (-2566.399) * [-2525.827] (-2587.765) (-2569.979) (-2564.934) -- 0:44:14
270000 -- (-2561.504) [-2537.749] (-2593.891) (-2579.060) * [-2545.118] (-2608.531) (-2568.419) (-2567.099) -- 0:44:15
Average standard deviation of split frequencies: 0.036017
271000 -- (-2566.569) [-2551.212] (-2595.241) (-2567.570) * [-2551.752] (-2591.162) (-2555.608) (-2558.142) -- 0:44:15
272000 -- (-2567.541) [-2545.565] (-2583.703) (-2585.971) * (-2562.148) (-2584.639) (-2553.478) [-2549.084] -- 0:44:15
273000 -- (-2558.740) (-2563.569) [-2555.165] (-2615.765) * (-2570.662) (-2599.384) (-2554.476) [-2540.413] -- 0:44:15
274000 -- (-2553.489) (-2574.254) [-2542.668] (-2562.760) * (-2558.070) (-2590.928) [-2530.265] (-2539.173) -- 0:44:17
275000 -- [-2544.083] (-2583.010) (-2555.376) (-2571.037) * (-2547.133) (-2611.872) [-2536.904] (-2558.559) -- 0:44:14
Average standard deviation of split frequencies: 0.036257
276000 -- [-2536.153] (-2579.283) (-2555.949) (-2587.083) * (-2545.806) (-2608.634) [-2535.341] (-2588.660) -- 0:44:09
277000 -- (-2552.313) (-2587.010) [-2554.323] (-2591.180) * (-2550.166) (-2601.510) [-2537.946] (-2563.812) -- 0:44:04
278000 -- [-2541.593] (-2572.542) (-2567.612) (-2598.874) * (-2565.052) (-2596.477) [-2531.089] (-2549.278) -- 0:44:01
279000 -- [-2545.963] (-2575.438) (-2581.531) (-2631.257) * (-2555.228) (-2591.398) [-2532.969] (-2579.619) -- 0:43:55
280000 -- [-2542.056] (-2570.313) (-2571.073) (-2608.298) * (-2571.434) (-2604.901) [-2523.205] (-2586.477) -- 0:43:53
Average standard deviation of split frequencies: 0.038478
281000 -- (-2566.362) (-2572.088) [-2560.985] (-2623.793) * (-2552.703) (-2615.880) [-2527.478] (-2609.292) -- 0:43:47
282000 -- (-2555.155) (-2595.256) [-2550.400] (-2583.513) * (-2551.086) (-2601.019) [-2535.529] (-2591.152) -- 0:43:45
283000 -- (-2580.002) (-2561.091) [-2551.320] (-2600.728) * (-2558.411) (-2594.207) [-2519.791] (-2595.322) -- 0:43:39
284000 -- (-2586.128) [-2558.042] (-2565.442) (-2616.584) * (-2552.375) (-2578.488) [-2517.295] (-2585.393) -- 0:43:34
285000 -- (-2587.822) [-2555.465] (-2583.187) (-2602.756) * (-2549.139) (-2597.995) [-2525.293] (-2597.075) -- 0:43:34
Average standard deviation of split frequencies: 0.038655
286000 -- (-2569.808) [-2562.366] (-2562.661) (-2569.784) * (-2552.068) (-2600.282) [-2517.858] (-2585.519) -- 0:43:33
287000 -- (-2565.098) (-2554.178) [-2564.381] (-2557.862) * (-2542.756) (-2581.711) [-2536.853] (-2592.762) -- 0:43:33
288000 -- (-2564.869) [-2552.350] (-2556.879) (-2573.256) * [-2534.993] (-2595.780) (-2526.782) (-2566.857) -- 0:43:33
289000 -- (-2570.175) (-2567.273) [-2559.058] (-2583.769) * (-2564.167) (-2607.337) [-2531.250] (-2570.882) -- 0:43:32
290000 -- (-2558.920) (-2566.444) [-2558.302] (-2591.785) * (-2558.376) (-2596.084) [-2520.431] (-2576.739) -- 0:43:32
Average standard deviation of split frequencies: 0.039128
291000 -- (-2565.245) (-2561.537) [-2548.461] (-2591.235) * (-2559.272) (-2603.272) [-2532.791] (-2582.234) -- 0:43:31
292000 -- (-2571.931) (-2557.887) [-2530.574] (-2571.236) * (-2545.859) (-2577.830) [-2530.779] (-2597.542) -- 0:43:31
293000 -- (-2576.970) (-2568.119) [-2536.054] (-2578.552) * (-2543.995) (-2566.568) [-2535.844] (-2591.678) -- 0:43:30
294000 -- (-2600.009) (-2572.659) [-2546.969] (-2578.431) * (-2545.121) (-2600.577) [-2545.031] (-2597.149) -- 0:43:30
295000 -- (-2601.717) (-2544.270) [-2549.379] (-2563.519) * [-2546.604] (-2589.751) (-2547.936) (-2564.312) -- 0:43:29
Average standard deviation of split frequencies: 0.039346
296000 -- (-2591.497) [-2546.629] (-2547.597) (-2570.357) * (-2555.870) (-2586.899) [-2540.830] (-2555.599) -- 0:43:29
297000 -- (-2577.116) (-2575.797) [-2541.077] (-2557.003) * (-2545.493) (-2583.408) [-2537.176] (-2587.361) -- 0:43:28
298000 -- (-2586.046) (-2567.685) [-2551.626] (-2556.540) * [-2539.920] (-2588.359) (-2542.764) (-2579.540) -- 0:43:30
299000 -- (-2572.407) [-2550.347] (-2566.676) (-2567.656) * (-2522.330) (-2587.247) [-2547.316] (-2574.587) -- 0:43:29
300000 -- (-2580.448) [-2542.905] (-2557.904) (-2546.072) * [-2540.170] (-2574.565) (-2538.052) (-2565.937) -- 0:43:26
Average standard deviation of split frequencies: 0.040314
301000 -- (-2570.637) [-2548.491] (-2569.849) (-2563.028) * (-2525.087) [-2540.867] (-2549.011) (-2577.949) -- 0:43:27
302000 -- (-2565.796) [-2552.139] (-2589.114) (-2569.984) * [-2530.916] (-2567.228) (-2553.836) (-2564.491) -- 0:43:27
303000 -- (-2565.345) [-2548.436] (-2594.088) (-2565.278) * (-2528.845) (-2563.647) [-2556.836] (-2583.197) -- 0:43:21
304000 -- (-2597.940) [-2538.019] (-2576.359) (-2543.262) * [-2535.413] (-2553.465) (-2576.718) (-2574.144) -- 0:43:18
305000 -- (-2589.502) [-2567.534] (-2560.238) (-2582.398) * [-2534.757] (-2578.389) (-2573.929) (-2603.054) -- 0:43:15
Average standard deviation of split frequencies: 0.039291
306000 -- (-2577.039) (-2563.668) (-2574.212) [-2556.682] * [-2550.792] (-2591.303) (-2579.125) (-2592.013) -- 0:43:14
307000 -- (-2587.431) (-2561.020) (-2578.781) [-2557.805] * (-2554.120) (-2556.580) [-2558.819] (-2572.645) -- 0:43:11
308000 -- (-2586.273) [-2554.835] (-2569.906) (-2554.120) * (-2540.146) [-2563.880] (-2585.406) (-2589.947) -- 0:43:08
309000 -- (-2566.375) [-2544.739] (-2583.045) (-2560.150) * [-2531.869] (-2556.152) (-2564.612) (-2606.376) -- 0:43:02
310000 -- (-2544.958) (-2575.276) (-2562.095) [-2536.884] * [-2541.571] (-2561.823) (-2555.211) (-2594.848) -- 0:42:57
Average standard deviation of split frequencies: 0.038679
311000 -- [-2528.548] (-2563.457) (-2565.793) (-2536.113) * [-2552.934] (-2548.485) (-2599.958) (-2568.609) -- 0:42:54
312000 -- [-2537.873] (-2574.522) (-2560.127) (-2568.149) * [-2553.009] (-2549.620) (-2628.783) (-2569.173) -- 0:42:48
313000 -- [-2548.376] (-2578.012) (-2554.668) (-2556.343) * [-2557.284] (-2560.778) (-2613.034) (-2603.719) -- 0:42:45
314000 -- [-2555.462] (-2592.065) (-2572.323) (-2547.625) * (-2561.933) [-2530.604] (-2598.942) (-2579.902) -- 0:42:40
315000 -- [-2545.092] (-2581.152) (-2551.281) (-2536.762) * [-2558.216] (-2546.136) (-2592.783) (-2576.400) -- 0:42:35
Average standard deviation of split frequencies: 0.038482
316000 -- (-2557.585) (-2570.949) (-2553.109) [-2535.244] * [-2554.384] (-2541.196) (-2566.775) (-2594.561) -- 0:42:32
317000 -- (-2547.712) (-2575.285) (-2567.573) [-2526.806] * (-2550.315) [-2550.545] (-2574.485) (-2579.810) -- 0:42:26
318000 -- (-2561.295) (-2586.311) (-2600.750) [-2529.899] * [-2554.784] (-2549.927) (-2564.541) (-2595.130) -- 0:42:23
319000 -- (-2549.371) (-2571.156) (-2575.996) [-2531.468] * [-2546.241] (-2546.276) (-2587.835) (-2574.317) -- 0:42:18
320000 -- (-2541.428) (-2564.258) (-2558.544) [-2550.018] * (-2553.749) [-2547.825] (-2579.175) (-2584.689) -- 0:42:13
Average standard deviation of split frequencies: 0.037286
321000 -- [-2545.258] (-2567.334) (-2554.816) (-2540.877) * [-2549.395] (-2558.643) (-2580.833) (-2559.608) -- 0:42:09
322000 -- [-2542.458] (-2549.164) (-2580.419) (-2529.833) * (-2569.852) [-2559.886] (-2586.930) (-2569.822) -- 0:42:04
323000 -- [-2544.661] (-2552.378) (-2586.936) (-2547.966) * (-2578.753) (-2557.246) (-2574.259) [-2565.069] -- 0:42:01
324000 -- [-2534.873] (-2553.529) (-2600.854) (-2567.179) * (-2547.416) [-2554.122] (-2583.640) (-2558.647) -- 0:41:56
325000 -- (-2524.945) [-2551.470] (-2581.619) (-2565.264) * (-2578.653) (-2567.522) (-2581.122) [-2550.076] -- 0:41:51
Average standard deviation of split frequencies: 0.036600
326000 -- [-2528.536] (-2555.579) (-2592.005) (-2551.162) * [-2558.647] (-2571.003) (-2581.329) (-2539.569) -- 0:41:47
327000 -- [-2545.584] (-2553.741) (-2579.012) (-2564.805) * [-2543.910] (-2562.979) (-2599.364) (-2551.878) -- 0:41:42
328000 -- (-2552.388) (-2553.298) [-2566.753] (-2593.473) * (-2550.216) (-2567.788) (-2605.813) [-2540.146] -- 0:41:37
329000 -- [-2550.811] (-2538.149) (-2575.320) (-2582.921) * (-2547.015) (-2577.082) (-2592.925) [-2537.983] -- 0:41:34
330000 -- (-2553.513) [-2536.602] (-2567.425) (-2573.974) * (-2564.330) (-2586.605) (-2587.640) [-2533.854] -- 0:41:29
Average standard deviation of split frequencies: 0.036111
331000 -- (-2543.549) [-2530.327] (-2571.347) (-2566.880) * (-2587.440) [-2548.471] (-2565.379) (-2533.601) -- 0:41:23
332000 -- [-2557.618] (-2552.298) (-2593.604) (-2569.651) * [-2549.051] (-2573.171) (-2582.097) (-2537.453) -- 0:41:20
333000 -- (-2555.573) [-2552.707] (-2580.902) (-2584.730) * [-2548.893] (-2566.333) (-2598.350) (-2534.933) -- 0:41:15
334000 -- [-2545.599] (-2538.929) (-2576.564) (-2566.373) * (-2567.421) (-2569.124) (-2564.888) [-2521.251] -- 0:41:12
335000 -- [-2529.394] (-2538.240) (-2587.272) (-2570.675) * (-2573.440) (-2575.911) (-2542.772) [-2534.852] -- 0:41:07
Average standard deviation of split frequencies: 0.035429
336000 -- [-2536.931] (-2542.769) (-2573.958) (-2553.872) * (-2592.232) (-2617.322) (-2554.837) [-2544.533] -- 0:41:02
337000 -- (-2552.126) [-2544.648] (-2589.238) (-2553.551) * (-2569.872) (-2607.666) (-2531.254) [-2531.871] -- 0:40:59
338000 -- (-2569.210) [-2535.789] (-2548.255) (-2582.204) * (-2577.255) (-2622.572) [-2529.497] (-2523.591) -- 0:40:54
339000 -- (-2562.029) [-2535.634] (-2542.245) (-2569.418) * (-2572.905) (-2606.639) (-2556.693) [-2544.949] -- 0:40:50
340000 -- (-2567.000) [-2525.518] (-2566.888) (-2559.632) * (-2573.403) (-2611.782) (-2553.371) [-2534.531] -- 0:40:45
Average standard deviation of split frequencies: 0.035750
341000 -- (-2600.725) [-2522.698] (-2561.940) (-2560.918) * (-2578.835) (-2588.697) (-2567.205) [-2543.244] -- 0:40:40
342000 -- (-2584.569) [-2520.543] (-2551.199) (-2550.781) * (-2583.012) (-2591.495) (-2581.732) [-2549.836] -- 0:40:37
343000 -- (-2574.152) [-2531.193] (-2535.703) (-2571.589) * (-2568.776) (-2589.002) (-2595.685) [-2534.311] -- 0:40:32
344000 -- (-2560.308) [-2544.186] (-2554.719) (-2567.489) * (-2592.268) (-2584.427) (-2561.207) [-2541.355] -- 0:40:27
345000 -- (-2549.471) [-2544.384] (-2562.900) (-2546.698) * (-2598.438) (-2596.791) (-2570.131) [-2542.332] -- 0:40:24
Average standard deviation of split frequencies: 0.035886
346000 -- (-2578.749) [-2544.920] (-2566.702) (-2563.960) * (-2626.330) (-2626.561) (-2559.048) [-2538.327] -- 0:40:19
347000 -- (-2597.176) [-2545.119] (-2566.506) (-2561.328) * (-2606.218) (-2614.347) [-2543.682] (-2535.822) -- 0:40:16
348000 -- (-2576.835) (-2555.165) (-2574.050) [-2549.617] * (-2584.121) (-2609.863) (-2545.062) [-2537.532] -- 0:40:11
349000 -- (-2577.503) (-2547.387) (-2607.751) [-2561.251] * (-2605.909) (-2594.308) (-2547.340) [-2536.186] -- 0:40:06
350000 -- (-2555.662) [-2535.990] (-2584.784) (-2562.445) * (-2587.031) (-2607.591) [-2543.616] (-2565.008) -- 0:40:03
Average standard deviation of split frequencies: 0.036455
351000 -- (-2552.853) [-2528.707] (-2595.574) (-2578.572) * (-2589.083) (-2585.862) [-2539.817] (-2576.607) -- 0:39:58
352000 -- [-2560.242] (-2556.256) (-2589.003) (-2589.589) * (-2573.050) (-2614.976) [-2548.852] (-2572.955) -- 0:39:53
353000 -- (-2557.303) [-2557.348] (-2584.120) (-2577.900) * (-2586.355) (-2617.606) [-2539.208] (-2579.063) -- 0:39:50
354000 -- [-2552.703] (-2571.615) (-2566.729) (-2601.993) * (-2579.205) (-2608.331) [-2528.066] (-2580.736) -- 0:39:45
355000 -- [-2548.772] (-2561.324) (-2558.055) (-2596.560) * (-2569.670) (-2614.722) [-2540.392] (-2561.905) -- 0:39:40
Average standard deviation of split frequencies: 0.037129
356000 -- [-2543.552] (-2565.120) (-2562.797) (-2567.484) * (-2589.263) (-2591.524) [-2548.706] (-2564.024) -- 0:39:37
357000 -- (-2542.257) (-2579.483) [-2546.094] (-2591.337) * (-2575.296) (-2602.029) [-2528.076] (-2568.874) -- 0:39:32
358000 -- [-2538.558] (-2573.091) (-2559.554) (-2593.628) * (-2577.169) (-2593.265) [-2537.782] (-2567.169) -- 0:39:28
359000 -- (-2533.116) (-2568.391) [-2548.389] (-2585.661) * (-2570.966) (-2582.745) [-2535.641] (-2583.305) -- 0:39:24
360000 -- [-2535.755] (-2546.907) (-2551.076) (-2574.854) * (-2556.058) (-2585.093) [-2532.781] (-2604.340) -- 0:39:20
Average standard deviation of split frequencies: 0.037721
361000 -- (-2544.336) [-2532.911] (-2552.465) (-2567.065) * (-2555.162) (-2609.390) [-2528.535] (-2591.002) -- 0:39:15
362000 -- (-2573.942) [-2531.016] (-2570.408) (-2565.149) * (-2571.896) (-2585.938) [-2527.725] (-2573.484) -- 0:39:11
363000 -- (-2558.866) [-2518.586] (-2581.670) (-2569.761) * (-2614.707) (-2589.889) [-2528.511] (-2544.762) -- 0:39:07
364000 -- [-2548.487] (-2521.402) (-2582.660) (-2547.151) * (-2589.488) (-2600.208) (-2543.824) [-2541.342] -- 0:39:03
365000 -- (-2563.928) [-2521.193] (-2562.405) (-2555.030) * (-2576.216) (-2599.601) [-2533.893] (-2541.573) -- 0:38:59
Average standard deviation of split frequencies: 0.037952
366000 -- (-2562.154) [-2521.085] (-2566.717) (-2560.403) * (-2560.181) (-2588.860) [-2530.420] (-2539.037) -- 0:38:55
367000 -- (-2539.843) [-2534.768] (-2591.849) (-2549.581) * (-2574.486) (-2608.423) [-2544.189] (-2534.132) -- 0:38:51
368000 -- [-2548.601] (-2547.301) (-2591.276) (-2551.210) * [-2555.597] (-2575.049) (-2563.555) (-2537.846) -- 0:38:47
369000 -- (-2571.636) (-2547.405) (-2585.614) [-2533.555] * (-2558.364) (-2555.057) (-2566.217) [-2532.321] -- 0:38:42
370000 -- (-2549.806) (-2580.426) (-2625.032) [-2524.838] * (-2566.487) (-2560.088) (-2555.794) [-2525.779] -- 0:38:39
Average standard deviation of split frequencies: 0.038027
371000 -- (-2544.718) (-2569.631) (-2624.718) [-2536.223] * (-2582.929) (-2587.155) (-2551.731) [-2530.087] -- 0:38:34
372000 -- [-2549.859] (-2570.005) (-2613.953) (-2535.077) * (-2572.222) (-2611.089) [-2540.433] (-2530.960) -- 0:38:29
373000 -- [-2553.821] (-2553.852) (-2623.578) (-2564.947) * (-2564.750) (-2600.755) [-2536.577] (-2531.493) -- 0:38:26
374000 -- [-2536.408] (-2561.139) (-2608.581) (-2568.795) * (-2574.999) (-2599.533) (-2545.560) [-2543.505] -- 0:38:21
375000 -- [-2537.501] (-2542.928) (-2628.051) (-2583.342) * (-2574.322) (-2607.151) [-2545.726] (-2550.966) -- 0:38:16
Average standard deviation of split frequencies: 0.037976
376000 -- (-2554.111) [-2534.981] (-2614.125) (-2581.424) * (-2563.021) (-2597.131) (-2557.761) [-2537.663] -- 0:38:11
377000 -- [-2546.850] (-2546.163) (-2601.434) (-2570.403) * [-2544.023] (-2592.030) (-2591.439) (-2547.103) -- 0:38:08
378000 -- (-2548.105) [-2554.390] (-2602.688) (-2567.594) * (-2547.251) (-2585.584) (-2585.782) [-2553.548] -- 0:38:03
379000 -- [-2546.572] (-2545.863) (-2609.312) (-2578.627) * (-2564.150) (-2575.336) (-2554.217) [-2558.110] -- 0:38:00
380000 -- [-2529.074] (-2567.080) (-2605.823) (-2602.241) * (-2545.913) (-2568.331) [-2542.201] (-2571.118) -- 0:37:56
Average standard deviation of split frequencies: 0.037944
381000 -- (-2539.790) [-2532.603] (-2617.659) (-2599.055) * (-2547.034) (-2537.986) [-2554.364] (-2563.474) -- 0:37:52
382000 -- [-2527.763] (-2536.649) (-2599.447) (-2598.170) * (-2563.080) [-2534.148] (-2586.818) (-2545.076) -- 0:37:49
383000 -- [-2529.231] (-2539.463) (-2607.726) (-2592.397) * (-2556.260) [-2540.341] (-2594.497) (-2547.086) -- 0:37:45
384000 -- [-2542.397] (-2539.652) (-2606.649) (-2574.044) * (-2567.139) [-2535.578] (-2597.811) (-2556.027) -- 0:37:41
385000 -- (-2566.360) [-2538.927] (-2585.587) (-2572.807) * (-2562.964) [-2552.698] (-2580.587) (-2561.906) -- 0:37:37
Average standard deviation of split frequencies: 0.037956
386000 -- (-2558.494) [-2522.653] (-2593.698) (-2564.933) * [-2552.695] (-2551.185) (-2595.744) (-2553.577) -- 0:37:32
387000 -- (-2571.583) [-2519.218] (-2575.663) (-2568.605) * (-2582.241) [-2538.856] (-2573.879) (-2555.230) -- 0:37:29
388000 -- (-2556.016) [-2522.192] (-2587.493) (-2554.874) * (-2570.143) [-2562.580] (-2593.328) (-2556.408) -- 0:37:24
389000 -- (-2546.225) (-2536.066) (-2578.534) [-2561.440] * (-2576.365) (-2564.930) (-2592.980) [-2556.564] -- 0:37:21
390000 -- [-2543.242] (-2520.240) (-2578.774) (-2558.360) * (-2584.135) (-2569.065) (-2594.902) [-2553.067] -- 0:37:16
Average standard deviation of split frequencies: 0.037738
391000 -- (-2560.285) [-2522.926] (-2585.733) (-2561.464) * (-2552.042) (-2583.396) (-2573.055) [-2545.284] -- 0:37:13
392000 -- (-2580.549) [-2518.009] (-2582.630) (-2558.138) * (-2552.709) (-2599.513) (-2557.772) [-2530.404] -- 0:37:08
393000 -- (-2555.508) [-2533.966] (-2572.186) (-2587.457) * (-2557.018) (-2598.543) (-2572.057) [-2515.770] -- 0:37:04
394000 -- (-2560.906) [-2537.517] (-2576.724) (-2600.132) * (-2565.994) (-2586.398) (-2568.388) [-2541.539] -- 0:37:00
395000 -- [-2543.566] (-2541.715) (-2562.918) (-2591.059) * [-2541.702] (-2592.595) (-2559.489) (-2556.257) -- 0:36:56
Average standard deviation of split frequencies: 0.038280
396000 -- (-2546.909) [-2535.272] (-2569.442) (-2580.238) * [-2541.166] (-2591.094) (-2576.157) (-2574.590) -- 0:36:53
397000 -- (-2536.392) [-2531.365] (-2573.760) (-2576.002) * [-2536.729] (-2565.981) (-2570.237) (-2576.576) -- 0:36:48
398000 -- (-2544.542) [-2532.140] (-2572.175) (-2575.463) * (-2560.365) (-2573.158) [-2539.825] (-2557.074) -- 0:36:43
399000 -- (-2562.797) [-2533.831] (-2588.835) (-2564.597) * [-2540.098] (-2588.592) (-2548.102) (-2541.419) -- 0:36:40
400000 -- (-2553.974) [-2541.053] (-2579.728) (-2577.964) * [-2536.381] (-2581.833) (-2560.636) (-2522.066) -- 0:36:36
Average standard deviation of split frequencies: 0.037952
401000 -- [-2553.602] (-2549.590) (-2592.183) (-2591.368) * (-2534.707) (-2603.875) (-2565.133) [-2536.067] -- 0:36:32
402000 -- (-2559.421) [-2545.092] (-2592.725) (-2574.409) * (-2532.841) (-2589.326) (-2560.511) [-2543.303] -- 0:36:28
403000 -- (-2583.367) [-2537.615] (-2591.257) (-2554.753) * (-2538.228) (-2587.918) (-2568.793) [-2538.313] -- 0:36:23
404000 -- (-2590.884) [-2539.808] (-2579.957) (-2565.685) * [-2542.450] (-2583.411) (-2583.739) (-2552.770) -- 0:36:20
405000 -- (-2578.316) [-2540.407] (-2561.425) (-2578.788) * (-2532.734) (-2603.582) (-2560.654) [-2562.288] -- 0:36:17
Average standard deviation of split frequencies: 0.038048
406000 -- (-2568.493) [-2526.544] (-2562.087) (-2580.005) * [-2537.037] (-2611.385) (-2560.645) (-2565.231) -- 0:36:12
407000 -- (-2564.166) [-2519.545] (-2581.801) (-2565.641) * [-2539.551] (-2603.262) (-2566.527) (-2563.368) -- 0:36:09
408000 -- (-2548.419) [-2516.997] (-2564.918) (-2574.491) * [-2528.921] (-2599.347) (-2562.185) (-2574.014) -- 0:36:04
409000 -- (-2572.704) [-2524.783] (-2539.635) (-2616.642) * [-2527.212] (-2597.588) (-2583.964) (-2551.548) -- 0:36:01
410000 -- (-2588.438) [-2534.485] (-2544.483) (-2582.376) * (-2539.369) (-2608.634) (-2588.691) [-2534.085] -- 0:35:57
Average standard deviation of split frequencies: 0.037757
411000 -- (-2573.649) [-2540.191] (-2558.630) (-2564.393) * (-2544.441) (-2597.085) (-2568.353) [-2536.550] -- 0:35:53
412000 -- (-2597.197) [-2530.121] (-2556.833) (-2570.659) * [-2540.071] (-2583.873) (-2567.259) (-2549.152) -- 0:35:49
413000 -- (-2568.858) [-2525.292] (-2565.081) (-2547.635) * (-2544.432) (-2570.510) (-2574.873) [-2538.790] -- 0:35:46
414000 -- (-2583.238) [-2530.860] (-2561.867) (-2557.593) * (-2549.309) [-2557.374] (-2587.316) (-2551.088) -- 0:35:41
415000 -- (-2560.211) [-2540.113] (-2559.511) (-2559.141) * [-2550.075] (-2562.917) (-2570.405) (-2548.276) -- 0:35:38
Average standard deviation of split frequencies: 0.038198
416000 -- (-2563.242) [-2538.888] (-2570.448) (-2559.380) * (-2547.687) (-2559.122) (-2569.540) [-2551.537] -- 0:35:35
417000 -- (-2575.310) [-2543.855] (-2567.599) (-2560.861) * (-2539.342) [-2570.297] (-2581.046) (-2574.350) -- 0:35:30
418000 -- (-2555.468) [-2545.481] (-2574.164) (-2589.443) * (-2549.500) (-2568.218) (-2589.849) [-2533.039] -- 0:35:27
419000 -- (-2558.610) (-2546.654) [-2531.914] (-2588.343) * (-2575.510) (-2573.820) (-2584.604) [-2534.432] -- 0:35:24
420000 -- (-2555.654) (-2556.378) [-2551.278] (-2584.370) * (-2554.383) (-2573.307) (-2577.249) [-2513.324] -- 0:35:19
Average standard deviation of split frequencies: 0.038538
421000 -- (-2567.041) [-2550.100] (-2563.455) (-2594.485) * (-2575.985) (-2573.474) (-2586.841) [-2522.178] -- 0:35:16
422000 -- (-2589.818) [-2546.812] (-2571.728) (-2604.455) * (-2593.262) (-2561.514) (-2569.257) [-2533.647] -- 0:35:13
423000 -- (-2577.901) [-2550.484] (-2591.887) (-2586.706) * (-2602.047) (-2558.059) (-2558.795) [-2521.846] -- 0:35:08
424000 -- (-2574.369) (-2559.002) [-2571.965] (-2574.833) * (-2620.459) (-2561.523) (-2589.359) [-2521.491] -- 0:35:05
425000 -- (-2559.376) [-2537.678] (-2592.263) (-2568.129) * (-2592.919) (-2580.111) (-2566.150) [-2538.003] -- 0:35:01
Average standard deviation of split frequencies: 0.038118
426000 -- (-2564.081) [-2528.249] (-2579.496) (-2566.632) * (-2568.841) (-2581.418) (-2618.912) [-2538.835] -- 0:34:57
427000 -- (-2560.260) [-2544.511] (-2590.784) (-2576.955) * (-2562.610) (-2575.018) (-2607.826) [-2520.409] -- 0:34:54
428000 -- (-2564.746) [-2552.324] (-2556.240) (-2586.190) * (-2568.894) (-2583.305) (-2613.891) [-2529.089] -- 0:34:51
429000 -- [-2539.725] (-2557.303) (-2564.255) (-2594.463) * (-2559.584) (-2573.845) (-2594.331) [-2522.879] -- 0:34:47
430000 -- [-2546.688] (-2561.382) (-2574.332) (-2612.063) * (-2552.371) (-2577.566) (-2601.199) [-2533.084] -- 0:34:45
Average standard deviation of split frequencies: 0.038173
431000 -- (-2563.847) (-2589.671) [-2555.794] (-2604.955) * (-2552.501) (-2584.840) (-2599.266) [-2535.931] -- 0:34:43
432000 -- (-2552.518) (-2599.767) [-2544.585] (-2593.391) * (-2553.844) (-2596.114) (-2577.032) [-2537.808] -- 0:34:42
433000 -- (-2563.016) (-2594.792) [-2541.404] (-2590.947) * [-2535.762] (-2604.659) (-2573.077) (-2532.804) -- 0:34:40
434000 -- (-2603.632) (-2577.252) [-2545.450] (-2594.930) * [-2528.377] (-2574.660) (-2586.519) (-2552.559) -- 0:34:38
435000 -- (-2558.258) (-2584.962) [-2533.600] (-2601.704) * (-2547.002) (-2567.776) (-2587.361) [-2548.364] -- 0:34:38
Average standard deviation of split frequencies: 0.036803
436000 -- (-2561.285) (-2591.636) [-2529.408] (-2611.146) * (-2543.904) (-2569.092) (-2589.189) [-2540.850] -- 0:34:36
437000 -- (-2555.597) (-2596.118) [-2542.409] (-2596.613) * [-2547.734] (-2569.647) (-2602.101) (-2539.382) -- 0:34:34
438000 -- (-2543.800) (-2599.661) [-2557.088] (-2582.735) * (-2559.169) (-2576.844) (-2583.036) [-2545.218] -- 0:34:33
439000 -- [-2535.481] (-2580.805) (-2547.378) (-2580.520) * [-2543.323] (-2603.506) (-2572.079) (-2551.066) -- 0:34:31
440000 -- (-2542.291) (-2580.684) (-2557.350) [-2569.596] * [-2534.439] (-2606.018) (-2569.188) (-2544.823) -- 0:34:28
Average standard deviation of split frequencies: 0.036906
441000 -- [-2537.233] (-2581.430) (-2560.490) (-2569.253) * (-2545.715) (-2580.590) (-2584.264) [-2542.882] -- 0:34:24
442000 -- (-2543.502) (-2581.188) [-2552.601] (-2572.232) * (-2561.619) (-2590.017) (-2568.614) [-2538.540] -- 0:34:20
443000 -- (-2549.976) (-2574.063) [-2546.563] (-2570.774) * (-2555.267) (-2591.193) (-2567.729) [-2540.563] -- 0:34:15
444000 -- (-2555.912) (-2586.000) [-2543.412] (-2594.522) * [-2551.092] (-2597.701) (-2592.337) (-2548.790) -- 0:34:11
445000 -- [-2555.402] (-2564.055) (-2547.162) (-2588.871) * (-2558.637) (-2597.879) (-2580.724) [-2538.997] -- 0:34:07
Average standard deviation of split frequencies: 0.036552
446000 -- [-2547.839] (-2557.293) (-2535.735) (-2588.935) * (-2546.256) (-2582.978) (-2586.999) [-2549.690] -- 0:34:03
447000 -- [-2537.840] (-2565.564) (-2565.025) (-2611.702) * [-2525.405] (-2586.247) (-2577.283) (-2540.310) -- 0:34:02
448000 -- [-2538.519] (-2563.480) (-2567.275) (-2621.968) * [-2535.120] (-2594.111) (-2561.877) (-2541.013) -- 0:34:00
449000 -- [-2564.459] (-2567.624) (-2555.176) (-2641.795) * [-2544.056] (-2614.657) (-2566.206) (-2540.468) -- 0:33:58
450000 -- (-2557.173) (-2563.621) [-2542.783] (-2624.049) * (-2545.368) (-2580.767) (-2585.665) [-2533.763] -- 0:33:55
Average standard deviation of split frequencies: 0.036611
451000 -- (-2588.570) [-2559.681] (-2544.789) (-2596.954) * (-2541.152) (-2580.100) (-2595.007) [-2538.194] -- 0:33:51
452000 -- (-2573.872) [-2550.322] (-2553.848) (-2562.669) * [-2549.207] (-2568.175) (-2591.066) (-2546.622) -- 0:33:47
453000 -- (-2577.742) (-2552.490) [-2548.844] (-2583.810) * (-2558.417) (-2584.658) (-2588.865) [-2542.757] -- 0:33:43
454000 -- (-2556.926) (-2561.187) [-2530.419] (-2582.910) * (-2565.375) (-2574.009) (-2559.530) [-2526.089] -- 0:33:39
455000 -- (-2561.999) (-2557.595) [-2527.606] (-2582.386) * (-2554.177) (-2565.556) (-2553.767) [-2527.196] -- 0:33:35
Average standard deviation of split frequencies: 0.035807
456000 -- (-2570.818) (-2596.090) [-2548.430] (-2583.679) * (-2561.778) (-2569.774) (-2552.368) [-2538.259] -- 0:33:31
457000 -- (-2550.281) (-2584.186) [-2543.492] (-2578.282) * (-2549.230) (-2577.765) [-2559.081] (-2552.271) -- 0:33:28
458000 -- [-2550.426] (-2592.566) (-2552.083) (-2583.302) * [-2546.143] (-2596.054) (-2538.339) (-2551.524) -- 0:33:23
459000 -- (-2557.967) (-2595.179) (-2551.115) [-2550.851] * (-2547.940) (-2576.124) [-2549.288] (-2579.487) -- 0:33:18
460000 -- [-2560.449] (-2597.643) (-2564.980) (-2545.571) * [-2569.618] (-2569.811) (-2568.338) (-2556.551) -- 0:33:15
Average standard deviation of split frequencies: 0.036247
461000 -- (-2557.927) (-2598.245) (-2556.744) [-2536.740] * (-2571.131) [-2554.626] (-2554.160) (-2572.898) -- 0:33:11
462000 -- [-2535.889] (-2612.324) (-2561.610) (-2537.319) * (-2558.520) (-2558.988) [-2561.084] (-2574.471) -- 0:33:07
463000 -- [-2530.824] (-2589.512) (-2563.842) (-2527.128) * (-2561.743) [-2565.706] (-2593.296) (-2576.131) -- 0:33:03
464000 -- (-2540.930) (-2566.731) (-2582.492) [-2546.958] * [-2542.440] (-2563.565) (-2573.969) (-2602.948) -- 0:32:58
465000 -- [-2555.996] (-2593.048) (-2588.015) (-2553.769) * [-2530.614] (-2570.755) (-2560.431) (-2585.147) -- 0:32:55
Average standard deviation of split frequencies: 0.036300
466000 -- [-2568.051] (-2579.413) (-2549.457) (-2558.729) * [-2542.053] (-2576.880) (-2565.465) (-2574.832) -- 0:32:50
467000 -- (-2566.220) (-2541.320) (-2563.562) [-2546.214] * (-2552.479) [-2559.632] (-2577.636) (-2561.726) -- 0:32:46
468000 -- (-2564.421) (-2567.093) [-2549.596] (-2572.247) * (-2578.367) [-2555.044] (-2576.867) (-2557.533) -- 0:32:43
469000 -- (-2562.996) (-2569.673) (-2542.837) [-2541.932] * (-2563.746) [-2543.518] (-2598.968) (-2573.511) -- 0:32:38
470000 -- (-2577.925) (-2575.591) [-2549.002] (-2543.180) * (-2591.158) [-2544.178] (-2600.815) (-2556.734) -- 0:32:35
Average standard deviation of split frequencies: 0.035507
471000 -- (-2577.248) (-2576.880) [-2555.168] (-2561.516) * (-2586.448) (-2551.483) (-2594.415) [-2537.174] -- 0:32:30
472000 -- [-2539.640] (-2592.414) (-2536.624) (-2578.415) * (-2573.822) [-2543.721] (-2606.440) (-2549.473) -- 0:32:27
473000 -- [-2545.358] (-2589.523) (-2553.148) (-2577.728) * (-2561.755) (-2570.311) (-2588.917) [-2544.627] -- 0:32:23
474000 -- [-2549.887] (-2575.914) (-2556.978) (-2591.775) * (-2563.285) (-2577.135) (-2609.400) [-2555.564] -- 0:32:19
475000 -- (-2556.638) (-2558.292) [-2538.854] (-2572.301) * (-2599.259) [-2548.663] (-2593.217) (-2570.818) -- 0:32:15
Average standard deviation of split frequencies: 0.035309
476000 -- [-2547.819] (-2578.404) (-2556.833) (-2585.472) * (-2573.100) [-2567.861] (-2604.188) (-2569.709) -- 0:32:11
477000 -- [-2553.864] (-2583.778) (-2553.324) (-2594.084) * [-2554.402] (-2578.862) (-2632.326) (-2576.598) -- 0:32:07
478000 -- (-2564.124) (-2585.026) [-2552.364] (-2589.550) * [-2556.748] (-2577.680) (-2627.187) (-2574.483) -- 0:32:04
479000 -- [-2565.822] (-2594.608) (-2561.787) (-2597.362) * [-2553.169] (-2565.114) (-2607.902) (-2573.771) -- 0:31:59
480000 -- (-2569.615) (-2605.274) [-2551.423] (-2587.101) * (-2560.143) [-2538.161] (-2594.443) (-2574.469) -- 0:31:56
Average standard deviation of split frequencies: 0.035296
481000 -- (-2556.324) (-2589.693) [-2553.265] (-2582.181) * (-2561.803) [-2542.240] (-2601.501) (-2587.239) -- 0:31:51
482000 -- (-2570.559) (-2592.378) [-2547.365] (-2552.539) * (-2573.122) [-2532.663] (-2601.401) (-2579.368) -- 0:31:47
483000 -- (-2555.908) (-2590.113) [-2541.088] (-2560.393) * (-2572.405) [-2536.257] (-2571.664) (-2570.621) -- 0:31:44
484000 -- (-2545.222) (-2591.469) (-2551.988) [-2549.966] * (-2587.537) [-2545.235] (-2585.218) (-2577.038) -- 0:31:39
485000 -- [-2531.846] (-2587.182) (-2563.975) (-2548.120) * (-2574.773) [-2532.448] (-2581.057) (-2571.601) -- 0:31:35
Average standard deviation of split frequencies: 0.034700
486000 -- [-2523.539] (-2559.058) (-2556.798) (-2557.437) * (-2599.712) [-2549.098] (-2601.602) (-2560.300) -- 0:31:32
487000 -- (-2553.281) (-2579.058) [-2540.035] (-2567.383) * (-2625.140) [-2533.468] (-2577.138) (-2572.332) -- 0:31:27
488000 -- (-2550.459) (-2556.414) [-2536.254] (-2569.548) * (-2625.834) [-2527.946] (-2581.545) (-2566.355) -- 0:31:23
489000 -- (-2559.578) (-2571.347) [-2535.975] (-2562.329) * (-2636.770) [-2535.663] (-2584.019) (-2577.147) -- 0:31:19
490000 -- (-2567.736) (-2572.792) [-2547.997] (-2556.805) * (-2631.709) (-2539.732) [-2573.341] (-2573.834) -- 0:31:15
Average standard deviation of split frequencies: 0.034396
491000 -- [-2547.702] (-2581.768) (-2563.419) (-2562.647) * (-2639.818) [-2537.271] (-2580.163) (-2564.162) -- 0:31:12
492000 -- (-2564.024) (-2597.349) [-2562.689] (-2568.724) * (-2611.203) [-2533.929] (-2568.651) (-2555.912) -- 0:31:07
493000 -- [-2542.213] (-2581.524) (-2570.448) (-2563.604) * (-2598.867) [-2528.565] (-2546.098) (-2576.656) -- 0:31:03
494000 -- [-2542.288] (-2599.724) (-2575.618) (-2571.359) * (-2616.269) [-2530.992] (-2575.899) (-2565.011) -- 0:31:00
495000 -- [-2543.026] (-2562.905) (-2569.376) (-2577.279) * (-2625.615) [-2533.422] (-2555.036) (-2573.631) -- 0:30:55
Average standard deviation of split frequencies: 0.033388
496000 -- (-2545.834) (-2569.663) [-2556.432] (-2613.498) * (-2632.793) [-2544.810] (-2561.582) (-2556.392) -- 0:30:52
497000 -- [-2546.533] (-2580.084) (-2553.679) (-2599.783) * (-2613.229) [-2536.963] (-2572.299) (-2555.217) -- 0:30:48
498000 -- [-2548.754] (-2562.588) (-2554.014) (-2587.237) * (-2600.762) [-2518.913] (-2582.128) (-2567.051) -- 0:30:44
499000 -- (-2542.855) (-2571.405) (-2571.639) [-2550.130] * (-2607.669) [-2514.428] (-2548.888) (-2582.520) -- 0:30:40
500000 -- (-2552.684) (-2572.642) (-2557.202) [-2557.449] * (-2583.226) (-2524.416) [-2538.345] (-2585.000) -- 0:30:36
Average standard deviation of split frequencies: 0.033145
501000 -- (-2576.521) (-2555.911) (-2554.834) [-2549.763] * (-2600.659) [-2536.148] (-2562.146) (-2561.766) -- 0:30:32
502000 -- (-2576.715) (-2567.167) [-2538.958] (-2579.051) * (-2578.255) (-2556.158) (-2570.180) [-2543.784] -- 0:30:28
503000 -- (-2591.485) [-2557.018] (-2552.091) (-2570.249) * (-2602.947) (-2557.151) (-2579.119) [-2545.693] -- 0:30:24
504000 -- (-2572.963) (-2547.670) (-2571.846) [-2564.748] * (-2614.498) (-2582.737) (-2592.050) [-2548.821] -- 0:30:22
505000 -- (-2575.415) [-2551.533] (-2585.168) (-2583.430) * (-2579.901) [-2550.585] (-2566.406) (-2575.089) -- 0:30:20
Average standard deviation of split frequencies: 0.032728
506000 -- (-2578.916) (-2549.741) [-2564.958] (-2582.288) * (-2573.195) (-2556.489) [-2566.575] (-2560.646) -- 0:30:17
507000 -- (-2582.555) [-2558.136] (-2552.751) (-2563.488) * (-2589.540) [-2566.419] (-2565.072) (-2546.048) -- 0:30:15
508000 -- (-2569.873) (-2569.168) [-2535.195] (-2545.467) * (-2578.221) (-2584.165) (-2568.300) [-2529.742] -- 0:30:13
509000 -- [-2542.223] (-2580.553) (-2577.555) (-2559.358) * (-2574.521) (-2564.461) (-2589.964) [-2536.873] -- 0:30:09
510000 -- (-2558.096) (-2587.706) (-2578.735) [-2540.206] * (-2560.581) [-2557.299] (-2607.770) (-2554.462) -- 0:30:05
Average standard deviation of split frequencies: 0.032263
511000 -- (-2546.978) (-2576.454) (-2590.045) [-2550.925] * [-2547.101] (-2563.548) (-2600.565) (-2550.237) -- 0:30:01
512000 -- (-2539.664) (-2563.957) (-2586.860) [-2532.403] * (-2552.874) (-2562.695) (-2603.655) [-2545.557] -- 0:29:57
513000 -- (-2575.598) (-2568.797) (-2576.068) [-2531.696] * (-2554.296) (-2580.947) (-2599.915) [-2545.041] -- 0:29:54
514000 -- (-2579.042) (-2560.185) (-2573.822) [-2543.919] * (-2543.827) (-2568.085) (-2586.733) [-2551.808] -- 0:29:51
515000 -- (-2573.149) (-2568.313) (-2559.101) [-2534.781] * [-2543.849] (-2547.905) (-2605.810) (-2555.176) -- 0:29:48
Average standard deviation of split frequencies: 0.032350
516000 -- (-2546.153) (-2554.090) (-2581.061) [-2544.322] * (-2566.108) (-2555.723) (-2609.624) [-2539.002] -- 0:29:45
517000 -- (-2551.462) (-2544.770) (-2597.917) [-2541.388] * (-2552.164) (-2544.767) (-2591.085) [-2548.545] -- 0:29:43
518000 -- [-2548.873] (-2557.023) (-2611.470) (-2551.498) * (-2546.047) (-2562.212) (-2591.776) [-2529.562] -- 0:29:41
519000 -- [-2549.866] (-2564.353) (-2597.547) (-2545.350) * (-2569.739) (-2540.007) (-2592.021) [-2538.941] -- 0:29:39
520000 -- [-2533.783] (-2579.446) (-2594.322) (-2542.472) * (-2550.264) (-2548.664) (-2585.412) [-2549.448] -- 0:29:36
Average standard deviation of split frequencies: 0.031942
521000 -- [-2521.782] (-2554.301) (-2590.303) (-2535.250) * (-2552.952) [-2544.669] (-2603.345) (-2557.657) -- 0:29:35
522000 -- [-2528.970] (-2560.685) (-2609.509) (-2561.442) * (-2556.458) (-2559.751) (-2619.026) [-2547.354] -- 0:29:32
523000 -- (-2547.748) (-2551.515) (-2592.468) [-2541.242] * (-2552.526) (-2550.280) (-2599.329) [-2547.645] -- 0:29:30
524000 -- (-2569.402) [-2563.566] (-2581.270) (-2562.899) * (-2554.246) (-2552.568) (-2597.293) [-2550.517] -- 0:29:27
525000 -- (-2579.339) [-2558.731] (-2570.668) (-2553.469) * [-2540.231] (-2566.151) (-2621.674) (-2544.196) -- 0:29:24
Average standard deviation of split frequencies: 0.031260
526000 -- (-2574.600) (-2565.042) (-2572.335) [-2546.066] * [-2533.139] (-2561.246) (-2613.002) (-2533.586) -- 0:29:20
527000 -- (-2598.447) (-2563.652) (-2569.727) [-2531.439] * [-2530.051] (-2586.695) (-2610.135) (-2550.930) -- 0:29:16
528000 -- (-2587.569) (-2560.994) (-2589.180) [-2549.223] * (-2543.047) (-2568.060) (-2606.343) [-2549.437] -- 0:29:12
529000 -- (-2586.784) [-2557.604] (-2568.118) (-2548.132) * (-2549.230) (-2571.758) (-2604.775) [-2553.667] -- 0:29:08
530000 -- (-2588.945) [-2536.331] (-2580.563) (-2550.328) * [-2527.078] (-2581.421) (-2610.209) (-2557.602) -- 0:29:04
Average standard deviation of split frequencies: 0.029883
531000 -- (-2589.350) [-2535.857] (-2597.420) (-2545.878) * [-2543.265] (-2572.716) (-2603.315) (-2550.816) -- 0:29:00
532000 -- (-2575.176) [-2548.758] (-2558.284) (-2560.639) * [-2548.553] (-2580.649) (-2602.294) (-2552.575) -- 0:28:56
533000 -- (-2581.193) (-2556.191) [-2535.863] (-2574.074) * [-2539.634] (-2564.606) (-2601.782) (-2556.425) -- 0:28:52
534000 -- (-2554.260) (-2563.498) [-2538.800] (-2591.615) * [-2520.935] (-2588.219) (-2592.288) (-2566.087) -- 0:28:48
535000 -- (-2558.159) (-2547.152) [-2533.836] (-2570.579) * [-2521.827] (-2577.291) (-2608.813) (-2558.727) -- 0:28:44
Average standard deviation of split frequencies: 0.028754
536000 -- (-2576.988) [-2531.884] (-2544.880) (-2582.901) * [-2528.796] (-2555.985) (-2618.483) (-2559.430) -- 0:28:40
537000 -- (-2562.978) (-2543.266) [-2542.029] (-2564.184) * (-2530.965) [-2526.196] (-2611.403) (-2559.912) -- 0:28:36
538000 -- (-2549.629) (-2576.289) [-2523.212] (-2577.858) * [-2520.714] (-2547.603) (-2615.071) (-2546.924) -- 0:28:32
539000 -- (-2561.334) (-2545.358) [-2533.157] (-2575.652) * [-2521.065] (-2559.699) (-2591.454) (-2566.492) -- 0:28:29
540000 -- (-2548.644) (-2551.680) [-2535.578] (-2560.775) * [-2527.460] (-2560.870) (-2588.517) (-2562.063) -- 0:28:27
Average standard deviation of split frequencies: 0.028212
541000 -- [-2532.967] (-2564.788) (-2549.727) (-2571.627) * [-2522.826] (-2570.906) (-2608.433) (-2577.025) -- 0:28:25
542000 -- [-2543.244] (-2551.445) (-2563.320) (-2584.510) * [-2524.074] (-2574.835) (-2619.046) (-2569.699) -- 0:28:22
543000 -- [-2541.539] (-2567.188) (-2553.242) (-2564.014) * [-2537.780] (-2550.060) (-2612.677) (-2557.075) -- 0:28:20
544000 -- (-2559.218) (-2541.691) (-2577.724) [-2554.765] * [-2541.193] (-2541.231) (-2618.565) (-2547.619) -- 0:28:17
545000 -- (-2541.512) (-2549.200) (-2581.486) [-2549.647] * (-2525.673) (-2560.306) (-2623.483) [-2545.334] -- 0:28:14
Average standard deviation of split frequencies: 0.027837
546000 -- [-2531.780] (-2554.612) (-2589.757) (-2556.143) * [-2529.564] (-2565.866) (-2632.644) (-2552.266) -- 0:28:12
547000 -- (-2554.574) [-2547.260] (-2602.415) (-2560.987) * (-2538.886) (-2575.732) (-2630.676) [-2526.741] -- 0:28:08
548000 -- (-2555.903) (-2546.830) (-2598.476) [-2538.670] * [-2544.269] (-2569.203) (-2578.209) (-2552.185) -- 0:28:05
549000 -- (-2545.213) (-2559.334) (-2592.906) [-2524.266] * (-2542.633) (-2568.429) (-2609.999) [-2559.424] -- 0:28:02
550000 -- (-2548.047) (-2546.381) (-2584.967) [-2523.085] * (-2538.733) (-2572.213) (-2603.207) [-2524.632] -- 0:27:59
Average standard deviation of split frequencies: 0.027809
551000 -- [-2535.830] (-2564.664) (-2579.369) (-2533.680) * (-2564.173) (-2576.651) (-2579.963) [-2532.698] -- 0:27:57
552000 -- [-2533.260] (-2591.728) (-2566.351) (-2531.722) * (-2556.001) (-2604.710) (-2573.664) [-2539.928] -- 0:27:53
553000 -- (-2542.491) (-2584.577) (-2557.428) [-2534.663] * (-2557.547) (-2587.718) (-2567.922) [-2539.767] -- 0:27:49
554000 -- (-2568.859) (-2572.832) [-2554.103] (-2545.210) * (-2564.906) (-2587.042) (-2571.275) [-2538.906] -- 0:27:45
555000 -- (-2561.689) (-2584.118) (-2561.714) [-2539.918] * (-2585.077) (-2538.438) (-2588.066) [-2539.320] -- 0:27:41
Average standard deviation of split frequencies: 0.027848
556000 -- (-2562.587) (-2569.251) (-2605.100) [-2533.989] * (-2571.612) (-2545.785) (-2606.997) [-2540.290] -- 0:27:37
557000 -- [-2552.593] (-2562.607) (-2577.614) (-2537.800) * (-2563.697) (-2565.140) (-2597.102) [-2539.587] -- 0:27:33
558000 -- (-2556.906) (-2589.647) (-2570.161) [-2528.590] * (-2554.135) (-2588.412) (-2621.978) [-2532.406] -- 0:27:29
559000 -- (-2539.817) (-2586.117) (-2563.384) [-2530.085] * (-2551.797) (-2594.294) (-2621.906) [-2531.597] -- 0:27:25
560000 -- [-2539.338] (-2589.542) (-2574.212) (-2539.573) * (-2563.338) (-2591.960) (-2585.570) [-2528.166] -- 0:27:21
Average standard deviation of split frequencies: 0.027677
561000 -- (-2530.590) (-2590.521) (-2584.619) [-2530.964] * (-2565.759) (-2621.609) (-2592.738) [-2537.033] -- 0:27:17
562000 -- [-2538.923] (-2574.212) (-2561.772) (-2536.935) * (-2572.885) (-2612.048) (-2600.079) [-2540.833] -- 0:27:13
563000 -- (-2564.231) (-2571.963) (-2560.717) [-2539.404] * (-2561.329) (-2596.494) (-2604.698) [-2526.545] -- 0:27:10
564000 -- (-2571.724) (-2577.877) (-2562.002) [-2538.300] * (-2571.825) (-2592.324) (-2579.635) [-2521.644] -- 0:27:05
565000 -- (-2557.687) (-2563.615) (-2573.658) [-2539.433] * (-2546.652) (-2582.963) (-2589.184) [-2533.456] -- 0:27:01
Average standard deviation of split frequencies: 0.027485
566000 -- (-2577.640) (-2582.251) (-2574.802) [-2532.607] * (-2581.552) (-2573.357) (-2574.222) [-2521.788] -- 0:26:57
567000 -- (-2569.859) (-2572.279) (-2588.127) [-2527.204] * (-2585.181) (-2610.524) (-2567.612) [-2527.283] -- 0:26:53
568000 -- (-2571.218) (-2595.563) (-2610.754) [-2535.585] * (-2603.113) (-2616.163) (-2558.740) [-2529.811] -- 0:26:49
569000 -- (-2545.337) (-2577.255) (-2601.832) [-2539.861] * (-2583.037) (-2618.776) [-2556.654] (-2543.324) -- 0:26:45
570000 -- (-2564.829) (-2600.758) (-2572.900) [-2545.467] * (-2579.702) (-2616.779) (-2554.767) [-2536.747] -- 0:26:41
Average standard deviation of split frequencies: 0.027226
571000 -- (-2578.481) (-2565.946) (-2585.520) [-2542.919] * [-2570.838] (-2620.887) (-2556.970) (-2559.403) -- 0:26:38
572000 -- (-2572.190) (-2579.660) (-2598.438) [-2548.374] * (-2583.052) (-2632.355) (-2543.469) [-2550.947] -- 0:26:33
573000 -- (-2580.147) (-2564.893) (-2624.729) [-2552.001] * (-2577.524) (-2611.678) (-2557.993) [-2558.830] -- 0:26:29
574000 -- (-2587.549) (-2583.618) (-2573.854) [-2533.319] * (-2570.430) (-2615.244) (-2553.389) [-2540.205] -- 0:26:25
575000 -- (-2559.649) (-2607.811) (-2575.017) [-2537.064] * (-2560.719) (-2620.749) (-2568.009) [-2536.673] -- 0:26:21
Average standard deviation of split frequencies: 0.027338
576000 -- (-2573.704) (-2569.837) (-2576.310) [-2546.302] * (-2586.759) (-2609.164) [-2552.851] (-2543.303) -- 0:26:17
577000 -- (-2583.910) (-2577.765) (-2581.768) [-2539.115] * (-2561.054) (-2609.533) (-2546.897) [-2532.487] -- 0:26:13
578000 -- (-2589.789) (-2566.903) (-2581.821) [-2536.459] * (-2590.661) (-2608.596) (-2578.202) [-2535.309] -- 0:26:08
579000 -- (-2550.960) (-2592.871) (-2572.043) [-2541.726] * (-2576.412) (-2602.541) (-2593.650) [-2525.689] -- 0:26:05
580000 -- (-2567.616) (-2584.537) (-2601.069) [-2540.843] * (-2551.163) (-2616.871) (-2598.812) [-2515.448] -- 0:26:01
Average standard deviation of split frequencies: 0.027768
581000 -- (-2571.331) (-2562.631) (-2596.634) [-2547.568] * (-2562.155) (-2607.431) (-2576.317) [-2520.068] -- 0:25:57
582000 -- (-2556.373) (-2557.051) (-2599.063) [-2556.369] * [-2560.156] (-2619.665) (-2567.284) (-2542.044) -- 0:25:53
583000 -- [-2556.245] (-2569.969) (-2560.975) (-2554.541) * (-2570.646) (-2600.107) (-2553.445) [-2530.398] -- 0:25:49
584000 -- [-2580.900] (-2553.844) (-2566.276) (-2589.143) * (-2570.532) (-2568.708) (-2565.774) [-2537.424] -- 0:25:45
585000 -- [-2557.156] (-2559.726) (-2580.226) (-2612.373) * (-2567.045) (-2567.194) (-2568.508) [-2529.621] -- 0:25:41
Average standard deviation of split frequencies: 0.027522
586000 -- [-2565.768] (-2573.607) (-2579.137) (-2576.886) * (-2577.074) (-2569.475) (-2571.697) [-2533.701] -- 0:25:38
587000 -- [-2570.780] (-2584.960) (-2587.059) (-2599.592) * (-2574.074) (-2600.357) (-2548.538) [-2548.207] -- 0:25:33
588000 -- [-2568.733] (-2558.296) (-2583.764) (-2617.069) * (-2593.387) (-2567.156) (-2547.828) [-2559.612] -- 0:25:30
589000 -- (-2577.834) [-2554.837] (-2600.826) (-2609.893) * (-2578.167) (-2593.611) (-2563.335) [-2543.908] -- 0:25:26
590000 -- (-2571.092) [-2567.147] (-2576.379) (-2615.143) * (-2571.537) (-2582.114) (-2580.134) [-2545.587] -- 0:25:23
Average standard deviation of split frequencies: 0.027949
591000 -- (-2579.673) (-2557.206) [-2572.466] (-2599.721) * (-2562.022) (-2574.949) (-2574.283) [-2532.672] -- 0:25:19
592000 -- (-2585.490) [-2544.601] (-2584.557) (-2590.230) * (-2575.230) (-2584.490) (-2584.905) [-2527.478] -- 0:25:15
593000 -- (-2583.697) [-2548.265] (-2578.960) (-2582.433) * (-2582.160) (-2574.401) (-2570.777) [-2527.445] -- 0:25:12
594000 -- (-2592.684) [-2532.745] (-2572.955) (-2576.431) * (-2596.489) (-2583.784) (-2604.386) [-2532.970] -- 0:25:07
595000 -- (-2595.958) [-2538.471] (-2566.759) (-2571.586) * (-2603.797) (-2579.080) (-2584.401) [-2533.878] -- 0:25:04
Average standard deviation of split frequencies: 0.028248
596000 -- (-2574.482) (-2549.532) [-2542.298] (-2596.499) * (-2593.119) (-2566.656) (-2583.456) [-2530.917] -- 0:25:02
597000 -- (-2579.672) (-2546.859) [-2549.826] (-2586.133) * (-2592.970) (-2578.464) (-2567.730) [-2549.640] -- 0:24:59
598000 -- (-2566.294) [-2546.357] (-2555.037) (-2585.821) * (-2579.217) (-2583.392) (-2588.266) [-2545.696] -- 0:24:56
599000 -- (-2586.176) [-2517.767] (-2555.038) (-2577.050) * (-2571.401) (-2570.821) (-2562.888) [-2551.615] -- 0:24:53
600000 -- (-2600.633) [-2518.930] (-2553.718) (-2593.577) * (-2561.915) (-2566.814) (-2584.991) [-2549.700] -- 0:24:50
Average standard deviation of split frequencies: 0.028140
601000 -- (-2586.372) [-2517.963] (-2567.714) (-2590.388) * (-2561.404) [-2558.505] (-2598.868) (-2547.079) -- 0:24:47
602000 -- (-2562.477) [-2528.177] (-2546.287) (-2611.276) * (-2552.395) (-2581.577) (-2574.266) [-2557.890] -- 0:24:45
603000 -- (-2584.059) [-2540.621] (-2538.691) (-2594.515) * (-2569.492) (-2571.911) [-2573.037] (-2567.401) -- 0:24:42
604000 -- (-2579.982) [-2563.165] (-2539.669) (-2595.700) * (-2563.874) (-2564.741) (-2590.736) [-2552.998] -- 0:24:38
605000 -- (-2563.077) (-2562.334) [-2543.659] (-2582.049) * (-2596.169) (-2562.721) (-2559.835) [-2557.331] -- 0:24:34
Average standard deviation of split frequencies: 0.028012
606000 -- (-2561.847) (-2586.698) [-2535.331] (-2575.123) * (-2578.642) (-2567.259) (-2555.441) [-2548.404] -- 0:24:30
607000 -- (-2567.890) (-2559.781) [-2525.443] (-2592.582) * (-2593.041) [-2538.452] (-2562.516) (-2571.605) -- 0:24:26
608000 -- (-2567.075) (-2553.783) [-2544.566] (-2596.198) * (-2578.823) (-2545.522) (-2558.627) [-2565.064] -- 0:24:22
609000 -- (-2573.350) (-2552.784) [-2541.902] (-2594.177) * (-2594.320) (-2558.658) (-2547.525) [-2551.508] -- 0:24:18
610000 -- [-2540.377] (-2546.719) (-2557.232) (-2603.853) * (-2604.191) (-2551.319) (-2574.411) [-2539.365] -- 0:24:15
Average standard deviation of split frequencies: 0.027981
611000 -- [-2526.643] (-2574.294) (-2562.044) (-2594.592) * (-2589.592) (-2567.204) [-2566.876] (-2548.046) -- 0:24:12
612000 -- [-2529.062] (-2560.718) (-2562.983) (-2604.289) * (-2566.227) (-2581.832) (-2558.244) [-2553.733] -- 0:24:08
613000 -- (-2534.236) (-2584.691) [-2534.781] (-2598.388) * [-2546.486] (-2552.266) (-2560.217) (-2534.259) -- 0:24:04
614000 -- (-2533.857) (-2576.407) [-2538.836] (-2619.601) * (-2558.779) (-2556.680) (-2593.576) [-2547.165] -- 0:24:00
615000 -- [-2527.596] (-2568.646) (-2535.174) (-2615.965) * (-2556.986) [-2530.701] (-2603.430) (-2557.895) -- 0:23:56
Average standard deviation of split frequencies: 0.027620
616000 -- (-2540.888) (-2561.258) [-2543.271] (-2605.983) * (-2570.237) [-2547.078] (-2583.554) (-2541.241) -- 0:23:52
617000 -- (-2555.424) (-2540.941) [-2535.605] (-2619.753) * (-2549.848) (-2548.996) (-2561.336) [-2545.929] -- 0:23:48
618000 -- (-2551.967) (-2550.093) [-2526.405] (-2612.813) * (-2544.737) (-2552.165) (-2574.140) [-2536.372] -- 0:23:44
619000 -- (-2556.732) (-2560.955) [-2540.005] (-2600.174) * [-2531.886] (-2556.057) (-2566.126) (-2558.729) -- 0:23:40
620000 -- (-2553.074) [-2530.520] (-2543.837) (-2606.367) * (-2554.725) (-2565.433) (-2576.611) [-2545.641] -- 0:23:36
Average standard deviation of split frequencies: 0.027427
621000 -- (-2550.572) [-2551.074] (-2557.845) (-2605.629) * (-2561.990) (-2572.335) (-2593.713) [-2539.555] -- 0:23:32
622000 -- (-2552.310) (-2565.590) [-2541.812] (-2626.459) * [-2541.683] (-2557.680) (-2578.465) (-2557.124) -- 0:23:28
623000 -- (-2569.796) (-2566.254) [-2539.007] (-2624.057) * [-2527.315] (-2562.629) (-2601.867) (-2549.492) -- 0:23:24
624000 -- (-2574.909) (-2570.174) [-2550.458] (-2610.829) * (-2543.232) (-2560.421) (-2614.372) [-2539.003] -- 0:23:20
625000 -- (-2552.064) (-2565.407) [-2534.789] (-2612.504) * (-2548.694) (-2566.363) (-2597.520) [-2545.820] -- 0:23:16
Average standard deviation of split frequencies: 0.027012
626000 -- (-2542.511) (-2552.924) [-2529.771] (-2617.139) * (-2548.135) (-2576.054) (-2588.925) [-2547.935] -- 0:23:12
627000 -- (-2550.056) [-2546.265] (-2530.757) (-2614.470) * (-2554.964) (-2571.898) (-2599.773) [-2543.772] -- 0:23:09
628000 -- (-2562.573) (-2547.694) [-2535.976] (-2617.600) * (-2572.278) (-2588.156) (-2586.681) [-2534.947] -- 0:23:04
629000 -- (-2586.465) (-2537.895) [-2555.346] (-2620.261) * (-2552.332) (-2592.719) (-2598.487) [-2534.420] -- 0:23:01
630000 -- (-2587.552) (-2559.737) [-2548.995] (-2631.372) * (-2545.343) (-2588.275) (-2581.328) [-2545.500] -- 0:22:57
Average standard deviation of split frequencies: 0.026737
631000 -- (-2576.910) (-2539.867) [-2540.828] (-2640.345) * [-2542.782] (-2588.840) (-2563.063) (-2544.322) -- 0:22:53
632000 -- (-2582.640) [-2544.433] (-2556.858) (-2633.459) * [-2534.322] (-2595.880) (-2600.596) (-2561.718) -- 0:22:49
633000 -- (-2589.935) [-2543.008] (-2546.661) (-2605.326) * [-2533.760] (-2590.393) (-2547.333) (-2547.148) -- 0:22:45
634000 -- (-2582.613) (-2549.560) [-2537.432] (-2605.438) * [-2537.311] (-2579.492) (-2543.195) (-2552.191) -- 0:22:41
635000 -- (-2571.741) (-2537.971) [-2532.301] (-2594.295) * (-2562.454) (-2559.654) [-2553.616] (-2559.073) -- 0:22:37
Average standard deviation of split frequencies: 0.026528
636000 -- (-2576.042) [-2539.430] (-2545.620) (-2597.360) * (-2582.187) (-2579.031) [-2550.938] (-2556.731) -- 0:22:33
637000 -- (-2567.538) [-2527.844] (-2538.920) (-2616.814) * (-2589.725) [-2549.731] (-2550.174) (-2555.800) -- 0:22:29
638000 -- (-2581.910) [-2539.945] (-2555.312) (-2600.493) * (-2590.488) [-2512.217] (-2550.806) (-2539.671) -- 0:22:25
639000 -- (-2582.717) (-2528.182) [-2543.665] (-2587.890) * (-2592.558) [-2529.091] (-2557.065) (-2540.359) -- 0:22:21
640000 -- (-2580.547) [-2545.245] (-2544.519) (-2606.538) * (-2598.709) (-2537.313) (-2563.126) [-2546.515] -- 0:22:17
Average standard deviation of split frequencies: 0.025872
641000 -- (-2575.449) (-2563.621) [-2543.784] (-2573.261) * (-2608.602) [-2529.201] (-2561.107) (-2546.031) -- 0:22:14
642000 -- (-2576.284) [-2553.861] (-2574.652) (-2565.169) * (-2610.048) (-2543.135) (-2583.758) [-2546.686] -- 0:22:09
643000 -- (-2571.639) [-2546.166] (-2566.389) (-2561.876) * (-2569.883) (-2535.821) (-2603.215) [-2556.568] -- 0:22:05
644000 -- (-2604.745) (-2569.811) (-2571.525) [-2565.350] * (-2569.548) (-2543.112) (-2573.010) [-2545.807] -- 0:22:02
645000 -- (-2581.378) [-2549.178] (-2555.961) (-2560.565) * (-2554.246) (-2568.532) (-2564.978) [-2545.647] -- 0:21:58
Average standard deviation of split frequencies: 0.025453
646000 -- (-2588.677) (-2557.681) [-2545.307] (-2568.133) * (-2572.132) (-2571.087) (-2552.646) [-2548.170] -- 0:21:54
647000 -- (-2612.803) (-2543.950) [-2538.980] (-2564.326) * (-2555.863) (-2565.027) (-2594.660) [-2536.821] -- 0:21:50
648000 -- (-2595.226) (-2553.611) [-2534.857] (-2587.502) * (-2565.910) (-2584.897) (-2586.578) [-2536.145] -- 0:21:46
649000 -- (-2606.777) [-2543.209] (-2545.572) (-2583.840) * (-2565.599) (-2577.512) (-2617.170) [-2529.592] -- 0:21:42
650000 -- (-2597.730) [-2536.694] (-2541.766) (-2590.366) * (-2574.599) (-2565.645) (-2590.837) [-2531.174] -- 0:21:39
Average standard deviation of split frequencies: 0.025698
651000 -- (-2560.525) [-2529.343] (-2541.505) (-2596.562) * (-2566.612) (-2581.061) (-2573.124) [-2539.007] -- 0:21:36
652000 -- (-2585.076) (-2543.977) [-2538.569] (-2603.436) * (-2563.997) (-2576.921) (-2573.319) [-2533.599] -- 0:21:33
653000 -- (-2577.097) [-2550.179] (-2538.524) (-2592.178) * [-2549.205] (-2588.758) (-2565.519) (-2550.189) -- 0:21:30
654000 -- (-2575.835) (-2544.724) [-2539.303] (-2605.595) * (-2585.393) (-2571.599) (-2546.962) [-2530.367] -- 0:21:27
655000 -- (-2579.153) (-2553.096) [-2535.018] (-2591.290) * (-2565.428) (-2601.829) (-2546.423) [-2545.920] -- 0:21:23
Average standard deviation of split frequencies: 0.025799
656000 -- (-2574.252) (-2566.886) [-2514.744] (-2578.625) * [-2547.096] (-2600.989) (-2555.338) (-2566.589) -- 0:21:18
657000 -- (-2584.658) (-2541.870) [-2531.716] (-2572.625) * [-2553.447] (-2601.212) (-2558.442) (-2561.292) -- 0:21:15
658000 -- (-2560.117) (-2543.457) [-2539.250] (-2588.897) * (-2555.109) (-2600.556) [-2538.130] (-2578.013) -- 0:21:11
659000 -- (-2596.288) (-2552.819) [-2540.872] (-2573.299) * [-2545.362] (-2605.273) (-2548.842) (-2566.506) -- 0:21:07
660000 -- (-2607.197) (-2550.267) [-2536.067] (-2539.523) * [-2544.074] (-2623.970) (-2542.677) (-2543.230) -- 0:21:03
Average standard deviation of split frequencies: 0.026015
661000 -- (-2628.752) [-2533.545] (-2560.640) (-2560.371) * (-2548.032) (-2615.738) [-2548.349] (-2561.394) -- 0:20:59
662000 -- (-2630.202) (-2536.455) (-2563.582) [-2555.079] * [-2547.539] (-2590.190) (-2562.640) (-2560.060) -- 0:20:56
663000 -- (-2611.723) (-2533.769) [-2546.263] (-2560.859) * (-2538.094) (-2603.108) (-2578.568) [-2548.656] -- 0:20:51
664000 -- (-2597.645) (-2549.092) [-2540.740] (-2560.907) * (-2556.715) (-2607.133) (-2571.282) [-2537.968] -- 0:20:47
665000 -- (-2593.143) [-2547.397] (-2552.009) (-2558.673) * (-2542.588) (-2596.747) (-2576.539) [-2542.802] -- 0:20:44
Average standard deviation of split frequencies: 0.025846
666000 -- (-2629.137) [-2556.872] (-2563.789) (-2567.901) * [-2535.658] (-2601.950) (-2591.925) (-2565.475) -- 0:20:41
667000 -- (-2605.040) (-2566.095) [-2539.539] (-2583.894) * [-2538.656] (-2602.876) (-2584.524) (-2563.101) -- 0:20:37
668000 -- (-2602.924) (-2545.218) [-2532.268] (-2572.017) * [-2529.065] (-2574.594) (-2588.443) (-2561.854) -- 0:20:34
669000 -- (-2605.562) (-2547.128) [-2549.688] (-2580.090) * [-2528.033] (-2595.741) (-2585.200) (-2571.791) -- 0:20:30
670000 -- (-2623.686) (-2564.888) [-2560.332] (-2567.782) * [-2550.706] (-2577.190) (-2609.942) (-2575.495) -- 0:20:26
Average standard deviation of split frequencies: 0.025890
671000 -- (-2613.874) (-2564.067) [-2557.844] (-2555.779) * (-2580.032) (-2573.279) (-2598.124) [-2550.198] -- 0:20:22
672000 -- (-2617.248) (-2570.449) [-2558.927] (-2581.954) * (-2560.584) (-2584.041) (-2606.491) [-2553.311] -- 0:20:18
673000 -- (-2639.887) (-2576.529) [-2552.027] (-2564.984) * (-2550.813) (-2581.471) (-2616.674) [-2536.248] -- 0:20:15
674000 -- (-2621.376) (-2586.959) [-2543.258] (-2566.299) * [-2552.096] (-2588.319) (-2584.429) (-2555.967) -- 0:20:11
675000 -- (-2584.226) (-2582.039) [-2537.475] (-2558.843) * [-2546.511] (-2593.637) (-2588.527) (-2539.648) -- 0:20:08
Average standard deviation of split frequencies: 0.026092
676000 -- (-2584.745) (-2609.176) (-2557.000) [-2551.200] * [-2545.739] (-2573.689) (-2589.912) (-2561.843) -- 0:20:04
677000 -- (-2573.050) (-2583.028) [-2542.338] (-2572.242) * (-2554.591) (-2573.376) (-2581.529) [-2533.339] -- 0:20:01
678000 -- (-2572.329) (-2595.863) [-2546.089] (-2548.366) * (-2570.689) (-2554.478) (-2574.913) [-2529.564] -- 0:19:57
679000 -- (-2575.687) (-2579.799) [-2551.529] (-2553.602) * (-2544.647) (-2565.852) (-2576.841) [-2517.428] -- 0:19:54
680000 -- (-2570.278) (-2578.060) [-2554.290] (-2567.198) * (-2554.168) (-2579.431) (-2580.397) [-2527.004] -- 0:19:50
Average standard deviation of split frequencies: 0.025796
681000 -- (-2572.258) (-2576.755) [-2544.624] (-2574.601) * (-2561.477) (-2606.710) (-2576.412) [-2541.727] -- 0:19:46
682000 -- (-2572.969) (-2576.461) [-2541.323] (-2579.326) * (-2549.374) (-2568.827) (-2584.926) [-2536.450] -- 0:19:42
683000 -- (-2556.377) (-2565.532) [-2552.097] (-2595.896) * [-2533.554] (-2569.504) (-2587.925) (-2564.383) -- 0:19:38
684000 -- (-2560.705) (-2576.268) [-2548.167] (-2583.334) * [-2550.695] (-2568.996) (-2592.421) (-2546.474) -- 0:19:35
685000 -- (-2560.619) (-2605.338) [-2532.526] (-2583.785) * [-2536.194] (-2587.099) (-2590.934) (-2554.381) -- 0:19:31
Average standard deviation of split frequencies: 0.025419
686000 -- [-2545.045] (-2575.718) (-2549.136) (-2598.261) * [-2555.366] (-2580.304) (-2557.458) (-2556.108) -- 0:19:28
687000 -- [-2536.001] (-2582.781) (-2541.642) (-2578.865) * [-2555.064] (-2575.990) (-2551.113) (-2592.319) -- 0:19:24
688000 -- [-2538.772] (-2562.035) (-2552.702) (-2605.007) * [-2558.453] (-2616.350) (-2567.457) (-2563.793) -- 0:19:20
689000 -- (-2543.681) [-2543.021] (-2560.972) (-2598.574) * [-2549.610] (-2620.213) (-2584.182) (-2554.396) -- 0:19:16
690000 -- (-2577.781) (-2557.833) [-2548.851] (-2592.331) * [-2530.000] (-2613.238) (-2561.396) (-2546.491) -- 0:19:13
Average standard deviation of split frequencies: 0.025659
691000 -- (-2569.408) (-2566.308) [-2537.486] (-2595.964) * (-2533.975) (-2601.268) (-2558.797) [-2537.922] -- 0:19:10
692000 -- (-2569.190) (-2537.663) [-2543.733] (-2609.992) * (-2539.539) (-2596.496) (-2548.211) [-2537.648] -- 0:19:06
693000 -- (-2577.639) (-2549.600) [-2535.921] (-2628.427) * [-2526.474] (-2612.740) (-2547.862) (-2555.227) -- 0:19:04
694000 -- (-2580.426) (-2560.298) [-2533.316] (-2604.811) * (-2548.055) (-2580.833) (-2569.866) [-2552.511] -- 0:19:01
695000 -- (-2584.594) (-2549.424) [-2536.690] (-2607.099) * [-2536.414] (-2581.236) (-2557.303) (-2573.968) -- 0:18:57
Average standard deviation of split frequencies: 0.025492
696000 -- (-2561.513) (-2573.496) [-2534.338] (-2620.738) * (-2537.635) (-2579.617) (-2549.978) [-2559.144] -- 0:18:55
697000 -- (-2545.539) (-2569.953) [-2521.581] (-2619.766) * [-2547.428] (-2562.711) (-2556.034) (-2564.149) -- 0:18:52
698000 -- (-2562.458) (-2553.615) [-2503.731] (-2619.357) * [-2542.884] (-2572.476) (-2560.245) (-2568.775) -- 0:18:48
699000 -- (-2572.060) (-2562.186) [-2511.239] (-2623.378) * [-2542.769] (-2592.114) (-2565.312) (-2567.295) -- 0:18:46
700000 -- (-2567.245) (-2568.298) [-2523.657] (-2626.476) * (-2557.321) (-2588.327) (-2564.638) [-2544.498] -- 0:18:42
Average standard deviation of split frequencies: 0.025973
701000 -- (-2569.813) (-2556.934) [-2528.033] (-2618.528) * [-2537.461] (-2589.807) (-2573.622) (-2557.132) -- 0:18:39
702000 -- (-2586.308) (-2553.395) [-2551.955] (-2611.842) * [-2555.568] (-2585.420) (-2595.554) (-2558.718) -- 0:18:35
703000 -- (-2594.096) [-2555.807] (-2555.536) (-2609.313) * (-2550.900) (-2567.344) (-2583.753) [-2547.468] -- 0:18:31
704000 -- (-2574.893) (-2566.655) [-2549.605] (-2623.822) * [-2537.164] (-2580.661) (-2583.293) (-2553.780) -- 0:18:27
705000 -- (-2571.744) (-2569.007) [-2544.759] (-2606.918) * (-2546.148) (-2574.712) (-2575.362) [-2547.393] -- 0:18:24
Average standard deviation of split frequencies: 0.026186
706000 -- (-2561.754) (-2577.233) [-2546.403] (-2607.739) * [-2529.438] (-2573.716) (-2571.849) (-2551.012) -- 0:18:21
707000 -- (-2568.627) (-2567.329) [-2540.820] (-2603.397) * [-2541.890] (-2566.337) (-2572.357) (-2555.603) -- 0:18:18
708000 -- (-2566.300) (-2568.949) [-2522.869] (-2592.253) * [-2544.113] (-2585.858) (-2564.159) (-2579.702) -- 0:18:15
709000 -- (-2575.047) (-2557.188) [-2533.164] (-2624.506) * [-2549.145] (-2580.728) (-2565.637) (-2580.723) -- 0:18:12
710000 -- (-2575.789) [-2547.449] (-2526.764) (-2622.073) * [-2552.247] (-2557.373) (-2571.097) (-2572.651) -- 0:18:08
Average standard deviation of split frequencies: 0.025681
711000 -- (-2599.733) (-2543.495) [-2535.755] (-2635.101) * [-2543.465] (-2566.127) (-2578.405) (-2559.764) -- 0:18:05
712000 -- (-2575.959) [-2548.318] (-2553.165) (-2635.559) * [-2549.718] (-2551.482) (-2600.513) (-2568.120) -- 0:18:02
713000 -- (-2562.741) (-2555.346) [-2558.661] (-2612.958) * (-2568.850) (-2549.111) (-2596.539) [-2545.274] -- 0:17:59
714000 -- (-2565.061) [-2551.218] (-2555.047) (-2653.273) * (-2563.851) [-2546.255] (-2603.183) (-2549.137) -- 0:17:55
715000 -- (-2547.156) [-2554.355] (-2557.985) (-2630.494) * (-2557.653) (-2547.395) (-2600.324) [-2543.862] -- 0:17:52
Average standard deviation of split frequencies: 0.025860
716000 -- [-2553.835] (-2563.277) (-2543.075) (-2595.290) * (-2548.288) (-2554.356) (-2588.877) [-2536.714] -- 0:17:49
717000 -- (-2572.946) [-2545.497] (-2551.424) (-2600.927) * [-2545.128] (-2568.417) (-2596.160) (-2542.762) -- 0:17:46
718000 -- (-2598.782) [-2549.644] (-2555.132) (-2624.202) * (-2562.373) (-2556.444) (-2590.675) [-2535.684] -- 0:17:42
719000 -- (-2597.965) [-2548.050] (-2562.014) (-2596.569) * (-2568.319) [-2553.939] (-2605.200) (-2564.308) -- 0:17:38
720000 -- (-2597.973) [-2540.904] (-2567.887) (-2594.811) * (-2549.622) [-2553.318] (-2600.237) (-2565.847) -- 0:17:34
Average standard deviation of split frequencies: 0.026236
721000 -- (-2582.234) [-2541.762] (-2547.267) (-2593.125) * [-2549.137] (-2545.732) (-2595.550) (-2580.594) -- 0:17:30
722000 -- (-2605.882) (-2553.760) [-2536.118] (-2591.329) * (-2562.237) [-2548.794] (-2605.542) (-2559.621) -- 0:17:26
723000 -- (-2615.888) (-2570.402) [-2532.016] (-2607.641) * [-2552.585] (-2554.460) (-2604.370) (-2539.315) -- 0:17:22
724000 -- (-2642.725) [-2563.891] (-2559.872) (-2599.162) * (-2560.827) (-2546.319) (-2584.989) [-2528.215] -- 0:17:19
725000 -- (-2591.083) (-2560.849) [-2545.905] (-2596.931) * (-2560.812) [-2540.566] (-2602.224) (-2544.544) -- 0:17:15
Average standard deviation of split frequencies: 0.026215
726000 -- (-2603.068) (-2560.841) (-2538.984) [-2564.891] * (-2566.666) [-2542.125] (-2600.395) (-2546.465) -- 0:17:11
727000 -- (-2568.701) (-2570.304) [-2532.135] (-2584.946) * (-2556.694) [-2537.829] (-2587.093) (-2549.203) -- 0:17:07
728000 -- (-2575.095) (-2563.010) [-2528.576] (-2576.510) * (-2551.863) (-2551.492) (-2591.673) [-2555.069] -- 0:17:03
729000 -- (-2574.471) (-2570.716) [-2533.199] (-2563.774) * (-2558.954) [-2538.831] (-2580.537) (-2566.277) -- 0:16:59
730000 -- (-2572.230) (-2574.664) [-2536.827] (-2557.523) * (-2566.386) (-2541.260) (-2576.519) [-2543.392] -- 0:16:55
Average standard deviation of split frequencies: 0.026691
731000 -- (-2556.809) (-2581.314) (-2536.043) [-2548.031] * (-2576.416) (-2543.255) (-2579.928) [-2530.117] -- 0:16:51
732000 -- (-2540.883) (-2589.477) (-2529.534) [-2551.501] * (-2590.113) [-2550.093] (-2595.866) (-2527.552) -- 0:16:47
733000 -- (-2558.892) (-2587.464) [-2543.532] (-2550.643) * (-2566.066) (-2560.640) (-2564.423) [-2521.803] -- 0:16:43
734000 -- (-2568.280) (-2599.367) [-2547.238] (-2558.999) * (-2579.832) (-2577.087) (-2585.195) [-2536.257] -- 0:16:40
735000 -- (-2568.633) (-2572.289) [-2541.598] (-2569.267) * (-2565.206) (-2547.486) (-2585.911) [-2537.263] -- 0:16:36
Average standard deviation of split frequencies: 0.026999
736000 -- (-2567.256) [-2545.454] (-2564.404) (-2562.633) * (-2564.207) [-2525.843] (-2606.272) (-2543.162) -- 0:16:32
737000 -- (-2569.581) (-2553.487) (-2586.279) [-2545.850] * (-2547.253) [-2521.456] (-2594.949) (-2544.703) -- 0:16:28
738000 -- (-2588.744) (-2535.253) (-2574.955) [-2531.205] * (-2549.618) [-2535.321] (-2581.998) (-2549.713) -- 0:16:24
739000 -- (-2582.966) [-2529.564] (-2590.541) (-2526.051) * (-2560.069) [-2547.685] (-2584.660) (-2541.526) -- 0:16:20
740000 -- (-2560.703) [-2536.352] (-2600.382) (-2545.110) * (-2589.037) [-2537.024] (-2605.574) (-2539.643) -- 0:16:17
Average standard deviation of split frequencies: 0.027302
741000 -- (-2582.688) [-2538.849] (-2601.434) (-2539.425) * (-2575.477) [-2532.560] (-2613.544) (-2552.662) -- 0:16:13
742000 -- (-2627.954) (-2535.633) (-2583.534) [-2533.374] * (-2580.802) [-2539.468] (-2604.360) (-2542.850) -- 0:16:09
743000 -- (-2628.247) [-2544.681] (-2584.853) (-2536.853) * (-2584.934) [-2534.957] (-2604.600) (-2543.640) -- 0:16:05
744000 -- (-2596.922) [-2543.754] (-2586.507) (-2547.593) * (-2573.149) (-2545.466) (-2584.707) [-2544.487] -- 0:16:01
745000 -- (-2605.532) (-2540.336) (-2579.070) [-2556.588] * (-2565.810) [-2540.451] (-2594.426) (-2535.052) -- 0:15:57
Average standard deviation of split frequencies: 0.027314
746000 -- (-2589.069) (-2554.480) [-2541.942] (-2546.686) * (-2585.392) (-2532.985) (-2619.438) [-2523.977] -- 0:15:53
747000 -- (-2606.126) (-2542.837) [-2544.703] (-2566.563) * (-2556.713) [-2532.424] (-2622.958) (-2522.417) -- 0:15:49
748000 -- (-2617.496) [-2550.551] (-2558.051) (-2551.587) * (-2565.418) [-2534.535] (-2626.807) (-2533.134) -- 0:15:46
749000 -- (-2616.371) (-2559.878) (-2543.454) [-2538.597] * (-2569.644) (-2537.323) (-2612.309) [-2536.896] -- 0:15:42
750000 -- (-2599.541) (-2565.853) (-2556.983) [-2532.801] * (-2570.160) [-2532.847] (-2583.212) (-2543.112) -- 0:15:38
Average standard deviation of split frequencies: 0.027311
751000 -- (-2605.434) (-2576.888) (-2562.268) [-2531.097] * (-2569.393) [-2534.173] (-2581.655) (-2554.705) -- 0:15:34
752000 -- (-2570.859) (-2563.381) (-2557.347) [-2532.211] * (-2549.938) [-2537.886] (-2596.643) (-2546.682) -- 0:15:30
753000 -- (-2583.945) (-2575.642) (-2564.473) [-2527.392] * [-2535.542] (-2555.411) (-2589.139) (-2572.680) -- 0:15:26
754000 -- (-2589.612) (-2563.264) (-2570.546) [-2533.204] * [-2537.447] (-2558.363) (-2578.110) (-2558.763) -- 0:15:22
755000 -- (-2607.023) (-2552.305) (-2556.983) [-2551.659] * (-2566.174) [-2544.056] (-2579.417) (-2552.627) -- 0:15:18
Average standard deviation of split frequencies: 0.027595
756000 -- (-2597.400) (-2544.740) [-2554.645] (-2541.720) * (-2580.681) [-2536.012] (-2583.709) (-2535.113) -- 0:15:15
757000 -- (-2612.343) (-2540.130) (-2555.070) [-2537.077] * (-2568.438) [-2542.318] (-2567.978) (-2533.081) -- 0:15:11
758000 -- (-2609.788) (-2542.842) (-2548.317) [-2541.733] * (-2576.860) (-2550.728) (-2570.491) [-2522.489] -- 0:15:07
759000 -- (-2605.489) (-2554.972) (-2562.323) [-2544.627] * (-2567.167) (-2533.434) [-2547.916] (-2526.150) -- 0:15:03
760000 -- (-2610.235) (-2559.873) (-2563.227) [-2533.201] * (-2586.460) [-2544.250] (-2563.561) (-2547.873) -- 0:15:00
Average standard deviation of split frequencies: 0.027565
761000 -- (-2586.989) (-2583.458) [-2552.533] (-2535.156) * (-2579.229) [-2544.999] (-2571.185) (-2538.637) -- 0:14:56
762000 -- (-2581.803) (-2575.773) (-2562.971) [-2535.207] * (-2583.037) (-2554.251) (-2559.264) [-2529.994] -- 0:14:52
763000 -- (-2572.535) (-2588.337) (-2566.546) [-2525.095] * (-2577.693) (-2547.726) (-2568.596) [-2530.456] -- 0:14:48
764000 -- (-2564.414) (-2575.678) (-2574.298) [-2547.441] * (-2602.716) [-2544.055] (-2558.355) (-2534.841) -- 0:14:44
765000 -- (-2594.242) (-2556.647) (-2570.370) [-2543.988] * (-2601.602) (-2566.823) (-2546.098) [-2527.418] -- 0:14:41
Average standard deviation of split frequencies: 0.027482
766000 -- (-2591.119) (-2550.688) (-2546.589) [-2549.618] * (-2567.727) (-2584.925) (-2535.660) [-2541.853] -- 0:14:37
767000 -- (-2610.166) (-2561.546) (-2544.454) [-2545.458] * (-2591.386) (-2582.537) (-2536.106) [-2548.856] -- 0:14:33
768000 -- (-2605.395) (-2554.512) (-2545.889) [-2539.169] * (-2539.077) (-2560.544) [-2532.895] (-2568.104) -- 0:14:30
769000 -- (-2607.771) (-2540.988) (-2546.753) [-2529.498] * (-2555.569) (-2588.572) [-2527.554] (-2543.422) -- 0:14:26
770000 -- (-2589.024) [-2533.649] (-2569.912) (-2540.194) * [-2535.031] (-2572.144) (-2554.240) (-2580.685) -- 0:14:22
Average standard deviation of split frequencies: 0.027326
771000 -- (-2603.299) (-2543.222) (-2567.871) [-2542.274] * [-2541.889] (-2558.528) (-2560.371) (-2571.856) -- 0:14:18
772000 -- (-2597.118) [-2538.273] (-2568.819) (-2544.822) * [-2545.675] (-2566.808) (-2569.369) (-2583.433) -- 0:14:15
773000 -- (-2608.828) [-2551.049] (-2576.208) (-2543.973) * [-2529.141] (-2551.612) (-2575.629) (-2568.076) -- 0:14:11
774000 -- (-2608.252) (-2549.415) (-2568.051) [-2530.671] * [-2527.677] (-2549.101) (-2571.298) (-2562.291) -- 0:14:07
775000 -- (-2610.503) (-2530.166) (-2570.805) [-2543.008] * [-2527.480] (-2555.293) (-2567.014) (-2571.416) -- 0:14:03
Average standard deviation of split frequencies: 0.027183
776000 -- (-2621.080) [-2526.414] (-2574.227) (-2537.379) * [-2527.468] (-2553.545) (-2574.420) (-2557.445) -- 0:13:59
777000 -- (-2596.715) [-2536.904] (-2586.711) (-2544.800) * [-2539.218] (-2557.160) (-2588.196) (-2560.845) -- 0:13:55
778000 -- (-2595.586) [-2525.826] (-2554.899) (-2562.659) * (-2539.441) [-2549.290] (-2576.242) (-2570.075) -- 0:13:51
779000 -- (-2574.259) (-2529.349) (-2581.261) [-2540.089] * (-2545.346) (-2549.635) (-2587.987) [-2542.581] -- 0:13:47
780000 -- (-2558.120) [-2531.566] (-2604.580) (-2537.908) * [-2537.110] (-2555.377) (-2580.544) (-2584.298) -- 0:13:44
Average standard deviation of split frequencies: 0.027042
781000 -- (-2561.575) [-2527.400] (-2622.878) (-2548.036) * (-2560.228) [-2552.056] (-2573.957) (-2576.549) -- 0:13:40
782000 -- (-2579.660) [-2524.840] (-2580.730) (-2559.342) * [-2550.523] (-2581.401) (-2590.175) (-2573.752) -- 0:13:36
783000 -- (-2575.810) (-2539.279) (-2554.834) [-2559.500] * [-2550.880] (-2554.482) (-2590.819) (-2577.237) -- 0:13:32
784000 -- (-2588.000) [-2546.756] (-2564.937) (-2563.584) * [-2543.732] (-2559.481) (-2587.643) (-2583.902) -- 0:13:29
785000 -- (-2585.995) (-2558.939) [-2540.486] (-2573.033) * (-2554.643) [-2555.608] (-2584.537) (-2587.182) -- 0:13:26
Average standard deviation of split frequencies: 0.027116
786000 -- (-2586.660) (-2566.845) [-2534.733] (-2627.056) * (-2577.101) [-2551.408] (-2580.420) (-2575.659) -- 0:13:22
787000 -- (-2598.057) (-2577.641) [-2546.543] (-2597.926) * (-2573.194) [-2551.103] (-2585.309) (-2569.873) -- 0:13:19
788000 -- (-2576.387) (-2569.719) [-2551.479] (-2578.617) * (-2580.251) [-2550.091] (-2575.522) (-2573.837) -- 0:13:15
789000 -- (-2593.871) (-2560.425) [-2529.560] (-2576.056) * (-2583.481) [-2537.985] (-2552.043) (-2571.073) -- 0:13:11
790000 -- (-2585.112) (-2576.046) [-2538.928] (-2562.097) * (-2583.334) [-2543.205] (-2553.146) (-2595.375) -- 0:13:08
Average standard deviation of split frequencies: 0.026830
791000 -- (-2592.758) (-2578.692) (-2543.215) [-2547.212] * (-2567.100) [-2537.544] (-2563.488) (-2609.706) -- 0:13:04
792000 -- (-2586.585) (-2577.073) [-2535.935] (-2555.455) * (-2557.226) (-2546.489) [-2538.125] (-2616.856) -- 0:13:01
793000 -- (-2596.527) (-2585.341) (-2562.098) [-2546.052] * (-2584.946) (-2531.183) [-2540.462] (-2604.651) -- 0:12:57
794000 -- (-2597.089) (-2580.936) (-2546.257) [-2532.125] * (-2569.774) (-2542.413) [-2532.239] (-2591.010) -- 0:12:54
795000 -- (-2591.749) (-2563.535) [-2543.721] (-2545.466) * (-2579.248) (-2553.699) [-2540.018] (-2635.623) -- 0:12:50
Average standard deviation of split frequencies: 0.026910
796000 -- (-2591.014) (-2582.650) (-2540.943) [-2547.195] * [-2569.364] (-2559.120) (-2547.972) (-2605.295) -- 0:12:46
797000 -- (-2602.722) (-2599.659) [-2526.366] (-2570.716) * (-2569.215) [-2545.134] (-2555.169) (-2599.811) -- 0:12:42
798000 -- (-2584.075) (-2587.940) [-2553.751] (-2554.733) * (-2558.800) (-2545.933) [-2551.140] (-2560.792) -- 0:12:38
799000 -- (-2579.271) (-2603.610) [-2538.618] (-2567.690) * (-2564.585) (-2541.698) [-2526.456] (-2575.997) -- 0:12:34
800000 -- (-2580.128) (-2603.994) [-2526.083] (-2566.267) * (-2592.114) (-2566.721) [-2534.172] (-2580.737) -- 0:12:31
Average standard deviation of split frequencies: 0.027143
801000 -- (-2583.931) (-2591.318) [-2521.401] (-2566.036) * (-2595.771) (-2561.430) [-2528.434] (-2547.931) -- 0:12:27
802000 -- (-2579.087) (-2581.862) [-2517.509] (-2563.010) * (-2586.100) (-2558.027) [-2525.963] (-2548.060) -- 0:12:23
803000 -- (-2595.151) (-2599.303) [-2508.930] (-2563.019) * (-2583.347) (-2563.721) [-2530.189] (-2561.069) -- 0:12:19
804000 -- (-2587.795) (-2574.883) (-2525.238) [-2536.236] * (-2587.684) (-2549.447) [-2533.469] (-2577.817) -- 0:12:15
805000 -- (-2603.487) (-2570.879) [-2534.207] (-2561.715) * (-2589.305) (-2550.261) [-2535.854] (-2580.177) -- 0:12:12
Average standard deviation of split frequencies: 0.027501
806000 -- (-2620.979) (-2584.138) (-2542.351) [-2550.488] * (-2605.569) (-2558.614) [-2545.942] (-2569.704) -- 0:12:08
807000 -- (-2604.742) (-2577.081) (-2547.424) [-2535.165] * (-2599.593) (-2574.800) (-2576.391) [-2555.897] -- 0:12:04
808000 -- (-2592.204) (-2569.170) (-2553.908) [-2548.080] * (-2578.837) (-2586.464) (-2552.017) [-2553.760] -- 0:12:00
809000 -- (-2571.910) (-2557.910) [-2544.492] (-2563.842) * (-2558.279) (-2583.736) [-2547.601] (-2562.606) -- 0:11:56
810000 -- (-2574.283) (-2568.250) [-2534.694] (-2550.494) * (-2564.806) (-2590.253) [-2558.349] (-2564.301) -- 0:11:52
Average standard deviation of split frequencies: 0.027331
811000 -- (-2578.207) [-2566.292] (-2558.993) (-2556.396) * [-2561.531] (-2572.391) (-2557.257) (-2586.516) -- 0:11:49
812000 -- (-2595.526) [-2561.672] (-2570.906) (-2562.326) * (-2579.496) (-2563.036) [-2545.642] (-2590.139) -- 0:11:45
813000 -- (-2605.048) (-2563.898) [-2561.864] (-2571.736) * (-2568.142) [-2547.007] (-2568.286) (-2567.895) -- 0:11:41
814000 -- (-2566.734) [-2554.934] (-2580.671) (-2563.880) * (-2568.983) [-2545.898] (-2550.642) (-2582.960) -- 0:11:37
815000 -- [-2566.094] (-2574.314) (-2585.393) (-2544.772) * [-2548.295] (-2581.813) (-2574.392) (-2576.591) -- 0:11:33
Average standard deviation of split frequencies: 0.027569
816000 -- (-2559.304) [-2568.506] (-2587.458) (-2562.245) * (-2560.110) (-2564.088) [-2552.709] (-2554.915) -- 0:11:30
817000 -- [-2554.481] (-2571.667) (-2566.963) (-2555.794) * (-2547.503) (-2591.329) [-2544.470] (-2548.890) -- 0:11:26
818000 -- (-2573.173) (-2584.830) (-2567.395) [-2554.234] * (-2545.319) (-2597.720) (-2561.376) [-2546.499] -- 0:11:22
819000 -- (-2561.452) (-2605.233) (-2574.473) [-2538.500] * [-2538.012] (-2598.425) (-2564.835) (-2544.445) -- 0:11:18
820000 -- (-2554.775) (-2576.882) (-2576.759) [-2544.433] * [-2539.940] (-2588.030) (-2595.837) (-2537.096) -- 0:11:14
Average standard deviation of split frequencies: 0.027175
821000 -- (-2557.474) (-2569.693) (-2588.693) [-2540.014] * (-2543.790) (-2578.795) (-2603.666) [-2545.258] -- 0:11:10
822000 -- (-2558.562) (-2562.507) (-2587.714) [-2547.344] * (-2545.720) (-2596.218) (-2589.524) [-2548.112] -- 0:11:06
823000 -- (-2552.341) (-2582.601) (-2601.957) [-2531.399] * [-2535.165] (-2563.046) (-2598.753) (-2561.607) -- 0:11:03
824000 -- (-2543.302) (-2567.808) (-2583.487) [-2526.062] * [-2542.280] (-2573.483) (-2593.995) (-2587.484) -- 0:10:59
825000 -- (-2541.329) (-2583.485) (-2599.280) [-2534.162] * [-2542.563] (-2575.693) (-2619.088) (-2582.877) -- 0:10:55
Average standard deviation of split frequencies: 0.027188
826000 -- [-2530.729] (-2572.443) (-2620.220) (-2540.595) * (-2541.753) [-2561.099] (-2600.757) (-2562.527) -- 0:10:51
827000 -- [-2534.829] (-2595.663) (-2609.607) (-2557.989) * (-2538.808) [-2551.170] (-2588.387) (-2570.432) -- 0:10:48
828000 -- (-2537.257) (-2578.320) (-2614.013) [-2545.291] * (-2546.161) [-2532.809] (-2592.251) (-2561.834) -- 0:10:44
829000 -- [-2532.507] (-2574.935) (-2589.190) (-2548.646) * (-2529.737) [-2531.486] (-2571.750) (-2574.603) -- 0:10:40
830000 -- (-2558.708) (-2558.146) (-2601.479) [-2543.911] * (-2536.565) [-2535.415] (-2580.660) (-2568.045) -- 0:10:36
Average standard deviation of split frequencies: 0.026702
831000 -- [-2553.354] (-2587.801) (-2591.299) (-2550.808) * [-2536.637] (-2561.069) (-2577.318) (-2551.766) -- 0:10:32
832000 -- [-2536.963] (-2594.547) (-2599.397) (-2544.191) * [-2520.464] (-2540.388) (-2602.579) (-2566.251) -- 0:10:28
833000 -- (-2573.335) (-2594.418) (-2592.629) [-2548.787] * [-2531.936] (-2526.907) (-2592.213) (-2566.634) -- 0:10:25
834000 -- (-2570.775) (-2597.532) (-2590.977) [-2545.540] * [-2544.214] (-2558.379) (-2595.975) (-2557.655) -- 0:10:21
835000 -- [-2573.619] (-2594.843) (-2593.656) (-2545.492) * (-2541.737) [-2543.760] (-2581.056) (-2548.184) -- 0:10:17
Average standard deviation of split frequencies: 0.026328
836000 -- (-2561.784) (-2615.100) (-2587.068) [-2536.589] * (-2539.169) [-2544.015] (-2589.574) (-2559.971) -- 0:10:13
837000 -- (-2547.619) (-2623.593) (-2578.508) [-2542.084] * [-2542.414] (-2552.654) (-2590.216) (-2560.659) -- 0:10:10
838000 -- (-2558.010) (-2627.098) (-2575.940) [-2551.313] * [-2538.969] (-2555.159) (-2588.613) (-2548.899) -- 0:10:06
839000 -- (-2554.215) (-2624.197) (-2583.706) [-2532.689] * (-2556.734) (-2565.598) (-2593.507) [-2536.378] -- 0:10:02
840000 -- (-2568.879) (-2601.773) (-2574.890) [-2537.593] * (-2554.473) (-2574.781) (-2581.514) [-2540.130] -- 0:09:58
Average standard deviation of split frequencies: 0.026344
841000 -- (-2574.418) (-2597.350) (-2582.033) [-2544.333] * (-2565.793) (-2578.223) (-2599.121) [-2552.283] -- 0:09:54
842000 -- [-2547.932] (-2613.815) (-2565.069) (-2556.740) * (-2555.809) (-2575.655) (-2606.490) [-2550.236] -- 0:09:51
843000 -- [-2558.024] (-2596.403) (-2568.562) (-2559.790) * (-2557.037) (-2583.302) (-2636.617) [-2537.381] -- 0:09:47
844000 -- (-2563.631) (-2647.708) (-2564.979) [-2538.113] * [-2556.534] (-2584.369) (-2612.555) (-2539.400) -- 0:09:43
845000 -- [-2542.002] (-2629.565) (-2594.793) (-2544.157) * (-2556.200) (-2574.255) (-2622.917) [-2536.316] -- 0:09:39
Average standard deviation of split frequencies: 0.026070
846000 -- (-2552.524) (-2602.629) (-2598.809) [-2541.892] * (-2560.806) (-2602.537) (-2599.452) [-2537.947] -- 0:09:35
847000 -- (-2566.377) (-2607.761) (-2592.682) [-2543.088] * (-2559.911) (-2568.143) (-2591.477) [-2538.397] -- 0:09:32
848000 -- (-2557.514) (-2604.768) (-2585.134) [-2541.208] * (-2560.705) (-2570.538) (-2583.731) [-2542.711] -- 0:09:28
849000 -- (-2555.112) (-2582.473) (-2605.019) [-2529.539] * (-2553.300) (-2573.931) (-2578.039) [-2548.390] -- 0:09:24
850000 -- [-2551.947] (-2577.634) (-2608.194) (-2562.770) * (-2536.665) (-2593.630) (-2582.721) [-2531.075] -- 0:09:20
Average standard deviation of split frequencies: 0.026183
851000 -- (-2557.718) (-2594.135) (-2594.335) [-2542.459] * (-2526.160) (-2589.633) (-2564.192) [-2522.616] -- 0:09:17
852000 -- [-2528.621] (-2595.718) (-2591.576) (-2538.646) * [-2533.128] (-2600.063) (-2557.941) (-2541.164) -- 0:09:13
853000 -- [-2529.664] (-2597.849) (-2583.624) (-2550.499) * (-2555.145) (-2600.409) [-2551.764] (-2539.946) -- 0:09:10
854000 -- [-2524.494] (-2602.149) (-2588.302) (-2532.650) * (-2536.965) (-2595.292) [-2552.510] (-2553.753) -- 0:09:06
855000 -- [-2537.278] (-2599.649) (-2593.665) (-2540.758) * (-2540.799) (-2587.392) (-2578.215) [-2530.579] -- 0:09:03
Average standard deviation of split frequencies: 0.026105
856000 -- [-2535.394] (-2589.010) (-2591.544) (-2540.602) * (-2544.374) (-2598.110) (-2575.753) [-2524.958] -- 0:08:59
857000 -- [-2546.287] (-2611.301) (-2573.841) (-2543.313) * [-2546.177] (-2580.180) (-2575.289) (-2541.748) -- 0:08:55
858000 -- (-2555.653) (-2621.387) (-2591.946) [-2546.292] * (-2544.195) (-2589.295) (-2558.073) [-2536.302] -- 0:08:51
859000 -- [-2545.873] (-2610.898) (-2590.096) (-2552.597) * (-2540.685) (-2587.857) (-2548.838) [-2532.054] -- 0:08:48
860000 -- (-2558.968) (-2614.817) (-2598.835) [-2554.253] * [-2527.672] (-2580.054) (-2556.029) (-2555.676) -- 0:08:44
Average standard deviation of split frequencies: 0.026331
861000 -- [-2558.162] (-2603.149) (-2586.288) (-2562.334) * (-2536.466) (-2597.287) [-2535.143] (-2558.889) -- 0:08:40
862000 -- (-2540.290) (-2583.053) (-2598.433) [-2542.720] * (-2537.062) (-2558.350) (-2569.574) [-2563.668] -- 0:08:36
863000 -- [-2533.643] (-2592.337) (-2598.382) (-2553.998) * [-2534.240] (-2552.938) (-2570.076) (-2562.671) -- 0:08:33
864000 -- [-2537.473] (-2580.579) (-2600.422) (-2559.815) * [-2546.517] (-2568.393) (-2572.686) (-2562.289) -- 0:08:29
865000 -- [-2524.646] (-2598.186) (-2578.307) (-2547.068) * (-2550.963) (-2579.215) (-2565.778) [-2553.676] -- 0:08:25
Average standard deviation of split frequencies: 0.025811
866000 -- (-2547.994) (-2606.177) (-2579.605) [-2549.365] * (-2553.758) (-2575.573) (-2581.167) [-2544.486] -- 0:08:21
867000 -- [-2545.780] (-2634.258) (-2582.252) (-2552.961) * (-2551.064) (-2587.018) (-2586.754) [-2560.887] -- 0:08:17
868000 -- [-2549.298] (-2624.674) (-2588.779) (-2564.201) * [-2532.480] (-2546.964) (-2602.863) (-2571.429) -- 0:08:14
869000 -- [-2513.758] (-2601.732) (-2593.101) (-2560.452) * [-2524.895] (-2557.608) (-2594.961) (-2560.723) -- 0:08:10
870000 -- [-2530.316] (-2601.937) (-2592.875) (-2588.438) * [-2533.865] (-2560.341) (-2599.826) (-2551.475) -- 0:08:06
Average standard deviation of split frequencies: 0.025616
871000 -- [-2539.831] (-2619.555) (-2581.023) (-2569.341) * (-2545.373) [-2538.999] (-2584.293) (-2564.203) -- 0:08:02
872000 -- [-2547.441] (-2592.727) (-2588.737) (-2562.935) * (-2547.254) (-2554.534) (-2589.536) [-2534.860] -- 0:07:58
873000 -- [-2549.952] (-2603.460) (-2588.743) (-2568.043) * [-2532.543] (-2565.546) (-2599.758) (-2535.424) -- 0:07:55
874000 -- [-2554.291] (-2595.635) (-2609.021) (-2559.389) * [-2542.474] (-2566.603) (-2600.114) (-2550.413) -- 0:07:51
875000 -- [-2546.077] (-2619.275) (-2577.398) (-2557.220) * [-2545.113] (-2591.789) (-2586.045) (-2540.478) -- 0:07:47
Average standard deviation of split frequencies: 0.025376
876000 -- (-2563.098) (-2610.129) (-2563.017) [-2555.199] * [-2524.466] (-2600.836) (-2600.705) (-2540.740) -- 0:07:43
877000 -- (-2553.310) (-2617.792) [-2556.468] (-2565.929) * [-2529.533] (-2585.070) (-2575.705) (-2551.314) -- 0:07:40
878000 -- (-2560.798) (-2595.466) [-2556.662] (-2571.177) * [-2537.040] (-2570.089) (-2582.455) (-2568.603) -- 0:07:36
879000 -- (-2535.183) (-2615.828) [-2554.806] (-2559.160) * [-2530.904] (-2566.830) (-2565.077) (-2558.285) -- 0:07:32
880000 -- (-2537.037) (-2600.806) [-2551.978] (-2554.644) * [-2528.652] (-2578.324) (-2590.073) (-2556.881) -- 0:07:28
Average standard deviation of split frequencies: 0.025465
881000 -- [-2537.104] (-2582.535) (-2556.262) (-2552.740) * [-2542.672] (-2574.601) (-2564.757) (-2552.478) -- 0:07:25
882000 -- (-2545.355) (-2610.477) (-2560.694) [-2542.919] * [-2550.382] (-2593.947) (-2583.712) (-2547.830) -- 0:07:21
883000 -- (-2555.757) (-2590.054) (-2569.657) [-2537.179] * [-2552.534] (-2565.311) (-2574.922) (-2554.584) -- 0:07:17
884000 -- (-2576.300) (-2584.487) [-2578.003] (-2557.980) * [-2546.391] (-2562.317) (-2581.765) (-2554.726) -- 0:07:13
885000 -- (-2577.881) (-2568.649) (-2583.955) [-2544.720] * (-2543.538) [-2556.153] (-2586.833) (-2565.299) -- 0:07:09
Average standard deviation of split frequencies: 0.025388
886000 -- [-2555.129] (-2558.180) (-2591.787) (-2549.392) * (-2542.597) [-2560.489] (-2585.041) (-2543.969) -- 0:07:06
887000 -- (-2560.410) (-2563.854) (-2590.723) [-2547.090] * (-2554.695) (-2563.323) (-2584.645) [-2529.481] -- 0:07:02
888000 -- [-2545.149] (-2581.163) (-2583.981) (-2554.798) * (-2578.750) (-2562.112) (-2563.288) [-2527.604] -- 0:06:58
889000 -- (-2554.982) (-2574.863) (-2594.897) [-2530.913] * (-2552.969) (-2561.878) (-2578.595) [-2551.561] -- 0:06:54
890000 -- [-2553.930] (-2586.230) (-2587.004) (-2537.030) * [-2542.682] (-2576.379) (-2600.361) (-2553.567) -- 0:06:51
Average standard deviation of split frequencies: 0.025165
891000 -- (-2562.179) (-2602.135) (-2561.353) [-2527.508] * [-2542.654] (-2577.581) (-2619.329) (-2558.202) -- 0:06:47
892000 -- (-2580.450) (-2596.949) (-2569.042) [-2517.668] * [-2531.470] (-2592.368) (-2600.876) (-2546.051) -- 0:06:43
893000 -- (-2547.371) (-2598.659) (-2581.698) [-2537.378] * [-2538.509] (-2595.625) (-2603.454) (-2537.393) -- 0:06:39
894000 -- (-2533.617) (-2581.537) (-2578.044) [-2524.423] * [-2548.441] (-2577.390) (-2588.760) (-2550.898) -- 0:06:36
895000 -- (-2541.626) (-2567.499) (-2591.963) [-2523.594] * (-2539.033) (-2566.165) (-2587.997) [-2541.975] -- 0:06:32
Average standard deviation of split frequencies: 0.025093
896000 -- [-2545.547] (-2583.095) (-2594.123) (-2545.693) * (-2554.617) (-2567.651) (-2602.791) [-2540.126] -- 0:06:28
897000 -- (-2539.326) (-2598.297) (-2611.607) [-2541.740] * (-2551.734) (-2563.238) [-2548.465] (-2554.640) -- 0:06:24
898000 -- [-2530.865] (-2578.421) (-2593.676) (-2542.146) * (-2575.103) (-2576.897) (-2551.090) [-2545.629] -- 0:06:20
899000 -- [-2524.678] (-2577.820) (-2576.462) (-2521.899) * (-2554.445) (-2545.875) (-2560.493) [-2553.660] -- 0:06:17
900000 -- (-2527.065) (-2586.355) (-2581.743) [-2534.121] * (-2548.098) (-2574.192) (-2574.392) [-2529.333] -- 0:06:13
Average standard deviation of split frequencies: 0.024682
901000 -- [-2550.474] (-2565.117) (-2595.276) (-2541.842) * (-2556.390) (-2596.261) (-2570.769) [-2530.959] -- 0:06:09
902000 -- (-2552.244) (-2585.190) (-2587.722) [-2541.931] * (-2574.906) (-2564.905) [-2567.822] (-2535.538) -- 0:06:05
903000 -- (-2548.939) (-2608.468) (-2580.847) [-2537.338] * (-2563.624) (-2580.612) (-2610.285) [-2535.118] -- 0:06:02
904000 -- (-2543.702) (-2597.268) (-2586.875) [-2551.823] * (-2563.319) (-2586.873) (-2594.594) [-2524.359] -- 0:05:58
905000 -- [-2533.820] (-2602.498) (-2577.693) (-2559.607) * (-2556.100) (-2570.664) (-2581.924) [-2522.537] -- 0:05:54
Average standard deviation of split frequencies: 0.024351
906000 -- (-2545.764) (-2598.237) (-2569.973) [-2546.891] * (-2554.811) (-2564.698) (-2599.421) [-2510.311] -- 0:05:50
907000 -- [-2535.186] (-2579.562) (-2568.300) (-2547.415) * (-2544.254) (-2585.370) (-2601.006) [-2525.943] -- 0:05:47
908000 -- [-2543.573] (-2595.380) (-2552.809) (-2556.637) * [-2549.696] (-2576.542) (-2585.568) (-2527.313) -- 0:05:43
909000 -- [-2543.247] (-2595.805) (-2555.453) (-2552.110) * [-2545.630] (-2595.088) (-2566.834) (-2526.125) -- 0:05:39
910000 -- [-2530.324] (-2571.752) (-2559.682) (-2555.836) * (-2539.044) (-2599.697) (-2561.335) [-2517.850] -- 0:05:35
Average standard deviation of split frequencies: 0.024161
911000 -- (-2548.196) (-2554.693) (-2563.749) [-2554.437] * (-2530.498) (-2563.060) (-2539.448) [-2528.406] -- 0:05:32
912000 -- (-2531.963) (-2551.361) (-2598.794) [-2563.231] * (-2530.419) (-2591.049) (-2548.643) [-2533.519] -- 0:05:28
913000 -- (-2537.218) [-2531.571] (-2588.898) (-2564.901) * [-2531.151] (-2592.621) (-2562.457) (-2530.293) -- 0:05:24
914000 -- (-2558.426) [-2536.396] (-2578.883) (-2554.644) * (-2535.360) (-2609.350) (-2561.309) [-2531.298] -- 0:05:20
915000 -- (-2570.399) [-2539.842] (-2576.840) (-2555.008) * [-2520.992] (-2608.825) (-2554.301) (-2536.166) -- 0:05:17
Average standard deviation of split frequencies: 0.024464
916000 -- (-2581.940) [-2545.954] (-2565.758) (-2539.476) * [-2530.327] (-2618.787) (-2567.363) (-2531.580) -- 0:05:13
917000 -- (-2609.286) [-2546.316] (-2562.497) (-2546.848) * [-2526.172] (-2592.805) (-2570.858) (-2542.366) -- 0:05:09
918000 -- (-2576.678) (-2558.163) (-2552.775) [-2531.029] * [-2540.804] (-2616.602) (-2566.788) (-2552.831) -- 0:05:05
919000 -- (-2604.604) [-2544.568] (-2564.947) (-2561.500) * [-2536.293] (-2587.101) (-2581.713) (-2545.163) -- 0:05:02
920000 -- (-2603.911) [-2551.020] (-2572.234) (-2566.580) * [-2537.855] (-2606.876) (-2579.564) (-2551.035) -- 0:04:58
Average standard deviation of split frequencies: 0.024906
921000 -- (-2609.751) [-2540.373] (-2564.779) (-2559.754) * (-2526.775) (-2596.895) (-2587.859) [-2553.221] -- 0:04:54
922000 -- (-2598.423) [-2538.295] (-2576.255) (-2541.641) * [-2534.849] (-2586.347) (-2602.215) (-2546.761) -- 0:04:50
923000 -- (-2595.153) (-2545.194) (-2596.514) [-2545.485] * [-2538.040] (-2573.044) (-2594.442) (-2560.992) -- 0:04:47
924000 -- (-2571.697) [-2532.874] (-2607.450) (-2557.946) * [-2525.037] (-2584.172) (-2593.866) (-2563.990) -- 0:04:43
925000 -- (-2563.148) [-2543.593] (-2580.160) (-2572.592) * [-2541.370] (-2595.969) (-2604.925) (-2563.246) -- 0:04:39
Average standard deviation of split frequencies: 0.025181
926000 -- (-2571.135) (-2549.929) [-2554.269] (-2561.715) * (-2541.010) (-2583.302) (-2636.909) [-2558.259] -- 0:04:35
927000 -- (-2563.454) [-2547.391] (-2541.724) (-2593.471) * (-2543.095) (-2589.064) (-2607.577) [-2549.358] -- 0:04:32
928000 -- (-2559.854) (-2560.003) (-2591.151) [-2562.884] * (-2549.261) (-2596.079) (-2598.986) [-2533.301] -- 0:04:28
929000 -- [-2546.883] (-2567.499) (-2562.675) (-2580.475) * (-2540.097) (-2580.300) (-2584.088) [-2525.015] -- 0:04:24
930000 -- (-2539.542) (-2576.736) [-2544.403] (-2568.026) * [-2537.457] (-2594.797) (-2594.495) (-2551.809) -- 0:04:20
Average standard deviation of split frequencies: 0.025593
931000 -- [-2535.621] (-2602.886) (-2545.243) (-2556.668) * [-2536.988] (-2590.694) (-2617.576) (-2549.756) -- 0:04:17
932000 -- (-2536.740) (-2605.519) [-2524.335] (-2565.723) * (-2561.234) (-2583.017) (-2596.370) [-2536.045] -- 0:04:13
933000 -- [-2523.138] (-2592.099) (-2555.457) (-2563.923) * (-2556.209) (-2569.705) (-2616.587) [-2533.158] -- 0:04:10
934000 -- [-2539.827] (-2598.058) (-2552.331) (-2559.560) * (-2553.760) (-2572.049) (-2592.291) [-2549.578] -- 0:04:06
935000 -- [-2542.615] (-2586.392) (-2544.392) (-2560.838) * (-2564.307) [-2563.086] (-2592.808) (-2576.120) -- 0:04:02
Average standard deviation of split frequencies: 0.025728
936000 -- (-2551.708) (-2574.711) (-2562.586) [-2558.145] * [-2547.784] (-2562.126) (-2604.815) (-2591.735) -- 0:03:59
937000 -- [-2546.165] (-2571.103) (-2587.578) (-2583.903) * (-2558.491) (-2582.476) (-2592.537) [-2559.677] -- 0:03:55
938000 -- (-2535.477) [-2551.745] (-2575.849) (-2563.080) * (-2556.391) (-2570.006) (-2601.685) [-2557.032] -- 0:03:52
939000 -- (-2553.215) (-2554.565) [-2557.706] (-2573.702) * (-2549.375) (-2582.377) (-2608.367) [-2553.994] -- 0:03:48
940000 -- [-2540.508] (-2582.798) (-2549.530) (-2570.184) * [-2559.816] (-2569.141) (-2635.592) (-2559.773) -- 0:03:44
Average standard deviation of split frequencies: 0.025584
941000 -- (-2532.111) (-2591.575) (-2562.483) [-2539.232] * (-2559.791) (-2569.327) (-2627.768) [-2569.880] -- 0:03:41
942000 -- (-2538.517) (-2587.963) (-2575.316) [-2529.933] * (-2572.307) (-2574.159) (-2636.795) [-2553.883] -- 0:03:37
943000 -- [-2539.958] (-2575.434) (-2576.888) (-2523.641) * (-2569.173) [-2556.508] (-2616.448) (-2539.664) -- 0:03:33
944000 -- (-2538.169) (-2578.269) (-2575.110) [-2523.891] * [-2557.938] (-2574.763) (-2602.462) (-2557.952) -- 0:03:30
945000 -- [-2536.920] (-2582.651) (-2592.681) (-2549.325) * (-2552.847) [-2561.539] (-2623.305) (-2588.692) -- 0:03:26
Average standard deviation of split frequencies: 0.025314
946000 -- (-2536.256) (-2569.435) (-2603.708) [-2541.288] * (-2568.497) (-2558.967) (-2608.938) [-2554.269] -- 0:03:22
947000 -- [-2538.150] (-2580.627) (-2594.355) (-2538.878) * [-2551.253] (-2569.120) (-2602.606) (-2542.575) -- 0:03:18
948000 -- (-2542.214) (-2586.424) (-2604.267) [-2526.063] * (-2558.308) (-2582.621) (-2593.416) [-2533.515] -- 0:03:14
949000 -- (-2547.676) (-2580.963) (-2617.967) [-2523.664] * (-2564.238) (-2578.856) (-2609.075) [-2535.333] -- 0:03:11
950000 -- (-2573.514) (-2558.502) (-2605.630) [-2529.437] * [-2551.592] (-2575.631) (-2596.857) (-2540.534) -- 0:03:07
Average standard deviation of split frequencies: 0.025404
951000 -- (-2558.195) (-2570.987) (-2612.415) [-2523.860] * (-2546.736) (-2576.301) (-2601.001) [-2549.070] -- 0:03:03
952000 -- (-2571.719) (-2547.505) (-2605.748) [-2530.881] * (-2560.524) (-2601.554) (-2590.062) [-2544.546] -- 0:02:59
953000 -- (-2570.020) (-2564.040) (-2597.139) [-2525.223] * (-2541.179) (-2579.196) (-2594.448) [-2533.579] -- 0:02:56
954000 -- (-2571.627) (-2561.973) (-2607.059) [-2521.014] * [-2530.531] (-2575.166) (-2598.169) (-2523.641) -- 0:02:52
955000 -- (-2567.359) [-2557.595] (-2602.616) (-2543.212) * (-2551.375) (-2575.469) (-2565.102) [-2535.214] -- 0:02:48
Average standard deviation of split frequencies: 0.025133
956000 -- (-2556.441) (-2563.915) (-2607.379) [-2547.188] * (-2560.038) (-2557.199) (-2555.982) [-2535.318] -- 0:02:44
957000 -- (-2562.211) (-2582.393) (-2598.589) [-2546.721] * (-2558.208) [-2545.471] (-2552.947) (-2552.932) -- 0:02:41
958000 -- (-2561.479) (-2570.167) (-2597.484) [-2553.302] * (-2561.328) (-2554.415) [-2541.634] (-2569.735) -- 0:02:37
959000 -- (-2563.309) (-2574.350) (-2583.399) [-2550.121] * (-2584.526) [-2546.012] (-2549.935) (-2571.156) -- 0:02:33
960000 -- (-2572.967) (-2599.711) (-2596.500) [-2544.278] * (-2599.836) [-2540.126] (-2541.444) (-2551.066) -- 0:02:29
Average standard deviation of split frequencies: 0.024639
961000 -- (-2554.160) (-2572.096) (-2580.322) [-2544.433] * [-2548.774] (-2549.707) (-2556.456) (-2544.522) -- 0:02:26
962000 -- [-2554.807] (-2567.898) (-2567.288) (-2546.540) * (-2540.254) (-2563.017) [-2554.159] (-2553.772) -- 0:02:22
963000 -- [-2554.882] (-2554.532) (-2593.710) (-2548.708) * (-2533.336) (-2562.927) [-2532.168] (-2561.588) -- 0:02:18
964000 -- (-2580.615) (-2561.300) (-2605.547) [-2520.028] * (-2545.074) (-2564.675) [-2542.105] (-2572.695) -- 0:02:14
965000 -- [-2551.998] (-2570.226) (-2610.243) (-2531.483) * (-2566.685) (-2559.899) [-2527.333] (-2567.102) -- 0:02:11
Average standard deviation of split frequencies: 0.024277
966000 -- (-2567.827) (-2577.982) (-2591.281) [-2534.086] * (-2565.320) (-2557.830) [-2539.473] (-2560.488) -- 0:02:07
967000 -- (-2567.419) (-2595.585) (-2562.578) [-2535.650] * (-2594.374) (-2556.755) [-2542.344] (-2553.337) -- 0:02:03
968000 -- (-2577.465) (-2584.375) (-2554.631) [-2530.865] * (-2599.731) (-2549.504) [-2541.006] (-2552.003) -- 0:01:59
969000 -- (-2555.954) (-2556.111) (-2566.659) [-2526.139] * (-2612.821) (-2569.503) [-2519.865] (-2554.491) -- 0:01:56
970000 -- (-2553.415) [-2546.692] (-2565.565) (-2539.535) * (-2596.492) (-2554.899) [-2516.186] (-2546.234) -- 0:01:52
Average standard deviation of split frequencies: 0.023812
971000 -- (-2574.838) (-2567.133) (-2544.697) [-2536.681] * (-2594.210) (-2546.151) [-2518.194] (-2570.278) -- 0:01:48
972000 -- (-2571.076) (-2582.942) (-2543.524) [-2535.053] * (-2564.569) (-2549.434) [-2512.975] (-2585.839) -- 0:01:44
973000 -- (-2602.772) (-2593.125) [-2546.820] (-2549.059) * (-2601.420) (-2571.254) [-2523.958] (-2572.268) -- 0:01:41
974000 -- (-2555.563) (-2590.587) [-2554.490] (-2564.160) * (-2557.888) (-2568.326) [-2514.598] (-2572.474) -- 0:01:37
975000 -- (-2555.200) (-2582.781) [-2544.347] (-2556.516) * (-2550.678) (-2569.938) [-2528.740] (-2558.155) -- 0:01:33
Average standard deviation of split frequencies: 0.023296
976000 -- [-2538.952] (-2564.904) (-2552.163) (-2571.669) * (-2562.104) (-2582.828) [-2533.820] (-2559.699) -- 0:01:29
977000 -- [-2533.596] (-2554.439) (-2565.635) (-2558.636) * (-2557.976) (-2603.428) (-2547.565) [-2532.390] -- 0:01:26
978000 -- (-2553.935) [-2540.700] (-2570.251) (-2577.482) * [-2564.703] (-2597.813) (-2544.119) (-2553.458) -- 0:01:22
979000 -- (-2549.577) [-2548.197] (-2587.747) (-2543.731) * [-2540.366] (-2605.814) (-2551.120) (-2535.418) -- 0:01:18
980000 -- (-2569.150) (-2548.841) (-2563.032) [-2541.279] * [-2541.786] (-2608.996) (-2547.046) (-2538.443) -- 0:01:14
Average standard deviation of split frequencies: 0.023180
981000 -- (-2573.739) (-2558.989) (-2563.252) [-2548.295] * [-2528.273] (-2604.274) (-2573.492) (-2529.720) -- 0:01:11
982000 -- [-2541.667] (-2577.161) (-2553.301) (-2541.020) * [-2540.804] (-2583.385) (-2572.800) (-2555.971) -- 0:01:07
983000 -- (-2549.371) (-2594.543) (-2561.413) [-2542.731] * (-2537.642) (-2594.163) (-2562.872) [-2554.963] -- 0:01:03
984000 -- [-2552.267] (-2565.958) (-2567.165) (-2522.385) * [-2535.557] (-2612.461) (-2578.084) (-2542.813) -- 0:00:59
985000 -- (-2549.383) (-2582.403) (-2579.294) [-2527.195] * [-2530.318] (-2582.795) (-2586.052) (-2548.767) -- 0:00:56
Average standard deviation of split frequencies: 0.022944
986000 -- (-2572.836) (-2562.311) (-2580.313) [-2527.856] * [-2552.911] (-2574.490) (-2590.199) (-2579.269) -- 0:00:52
987000 -- (-2559.576) (-2571.804) (-2567.729) [-2534.633] * [-2538.115] (-2603.221) (-2581.687) (-2565.767) -- 0:00:48
988000 -- (-2563.316) (-2591.422) (-2563.627) [-2516.973] * [-2546.137] (-2577.532) (-2592.646) (-2566.313) -- 0:00:44
989000 -- (-2553.111) (-2600.986) (-2564.994) [-2519.840] * [-2530.565] (-2564.136) (-2590.194) (-2553.882) -- 0:00:41
990000 -- [-2546.155] (-2579.892) (-2576.543) (-2541.197) * [-2539.757] (-2594.962) (-2587.016) (-2562.276) -- 0:00:37
Average standard deviation of split frequencies: 0.022931
991000 -- (-2552.540) (-2563.617) (-2579.369) [-2541.304] * [-2527.303] (-2602.959) (-2572.583) (-2556.232) -- 0:00:33
992000 -- (-2553.327) (-2578.961) (-2585.183) [-2540.900] * (-2542.992) (-2577.081) (-2582.275) [-2541.803] -- 0:00:29
993000 -- [-2559.340] (-2569.312) (-2576.163) (-2545.035) * [-2542.000] (-2601.495) (-2578.379) (-2549.323) -- 0:00:26
994000 -- [-2577.539] (-2558.826) (-2564.297) (-2542.728) * [-2534.018] (-2608.138) (-2574.015) (-2539.466) -- 0:00:22
995000 -- (-2564.704) (-2558.889) (-2587.995) [-2540.242] * [-2532.708] (-2593.781) (-2580.723) (-2544.411) -- 0:00:18
Average standard deviation of split frequencies: 0.022803
996000 -- (-2557.215) (-2560.066) (-2584.035) [-2535.624] * [-2539.001] (-2568.287) (-2566.112) (-2589.807) -- 0:00:14
997000 -- (-2551.645) (-2584.916) [-2557.922] (-2540.787) * [-2533.333] (-2583.087) (-2548.307) (-2571.386) -- 0:00:11
998000 -- (-2567.417) (-2596.107) (-2543.727) [-2526.263] * (-2543.374) (-2593.709) [-2533.115] (-2584.964) -- 0:00:07
999000 -- (-2568.929) (-2601.481) (-2573.067) [-2522.387] * [-2534.744] (-2599.473) (-2532.742) (-2595.436) -- 0:00:03
1000000 -- (-2554.512) (-2569.254) (-2579.668) [-2522.947] * [-2524.809] (-2589.821) (-2537.346) (-2586.940) -- 0:00:00
Average standard deviation of split frequencies: 0.022677
Analysis completed in 1 hours 2 mins 17 seconds
Analysis used 3733.31 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -2502.85
Likelihood of best state for "cold" chain of run 2 was -2503.75
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
40.9 % ( 33 %) Dirichlet(Revmat{all})
61.1 % ( 46 %) Slider(Revmat{all})
26.6 % ( 27 %) Dirichlet(Pi{all})
28.5 % ( 21 %) Slider(Pi{all})
55.4 % ( 30 %) Multiplier(Alpha{1,2})
52.9 % ( 21 %) Multiplier(Alpha{3})
74.7 % ( 54 %) Slider(Pinvar{all})
62.8 % ( 61 %) ExtSPR(Tau{all},V{all})
57.6 % ( 59 %) ExtTBR(Tau{all},V{all})
69.7 % ( 72 %) NNI(Tau{all},V{all})
43.9 % ( 38 %) ParsSPR(Tau{all},V{all})
27.4 % ( 19 %) Multiplier(V{all})
74.3 % ( 75 %) Nodeslider(V{all})
25.3 % ( 22 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
41.8 % ( 21 %) Dirichlet(Revmat{all})
59.6 % ( 41 %) Slider(Revmat{all})
26.2 % ( 25 %) Dirichlet(Pi{all})
28.5 % ( 23 %) Slider(Pi{all})
55.7 % ( 28 %) Multiplier(Alpha{1,2})
52.8 % ( 27 %) Multiplier(Alpha{3})
74.7 % ( 41 %) Slider(Pinvar{all})
62.8 % ( 56 %) ExtSPR(Tau{all},V{all})
57.2 % ( 58 %) ExtTBR(Tau{all},V{all})
69.5 % ( 64 %) NNI(Tau{all},V{all})
43.5 % ( 53 %) ParsSPR(Tau{all},V{all})
27.5 % ( 27 %) Multiplier(V{all})
74.4 % ( 64 %) Nodeslider(V{all})
25.2 % ( 24 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.23 0.02 0.00
2 | 166142 0.23 0.02
3 | 167051 166298 0.26
4 | 166744 166686 167079
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.23 0.02 0.00
2 | 166970 0.24 0.02
3 | 166883 166098 0.24
4 | 166599 166507 166943
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -2528.69
| 2 2 2 |
| |
| 1 2 |
| 1 122 1 2 1 1 2 |
| 2 1 2 2 2 2 1 1 2 1 2 2|
| 2 22 2 *221 1 1|
| 2* 2 1 1 * 2 11 2 11 2 1 |
| 11 2 2 1 1 1 11 1 * |
| 1 2 1 1 2 2 2 121 22 2 2 |
| 2 2 1 2 1 21 222 2 1 |
|* * 2 2 1 2 1 |
| 11 1 111 1 2 |
| 2 1 1 1 1 |
| 11 1 |
| 2 1 2 2 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -2553.47
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2510.90 -2579.49
2 -2512.99 -2577.69
--------------------------------------
TOTAL -2511.48 -2578.95
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.460610 0.001300 0.394801 0.535470 0.459827 969.35 1143.90 1.000
r(A<->C){all} 0.137441 0.000716 0.088045 0.193436 0.135619 468.17 529.78 1.000
r(A<->G){all} 0.220844 0.001021 0.157658 0.278973 0.219459 518.29 529.74 1.000
r(A<->T){all} 0.069266 0.000203 0.042947 0.096732 0.068614 771.28 848.33 1.001
r(C<->G){all} 0.114353 0.000730 0.061743 0.166011 0.112764 532.11 586.58 1.000
r(C<->T){all} 0.327568 0.001135 0.262931 0.393698 0.327599 511.94 527.68 1.000
r(G<->T){all} 0.130528 0.000430 0.090401 0.170363 0.129488 733.02 775.16 1.003
pi(A){all} 0.227753 0.000225 0.199303 0.256743 0.227132 885.55 924.96 1.001
pi(C){all} 0.198669 0.000190 0.173549 0.226718 0.198212 730.60 921.64 1.000
pi(G){all} 0.195957 0.000194 0.168922 0.223022 0.195998 773.31 790.46 1.001
pi(T){all} 0.377621 0.000298 0.343960 0.409905 0.377672 685.79 796.96 1.000
alpha{1,2} 1.610998 0.771154 0.522436 3.334754 1.391284 1011.99 1058.36 1.000
alpha{3} 1.459602 0.491559 0.483515 2.864121 1.307378 884.62 975.16 1.002
pinvar{all} 0.109132 0.006109 0.000005 0.257056 0.095639 1037.61 1049.43 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C422
2 -- C65
3 -- C325
4 -- C183
5 -- C150
6 -- C182
7 -- C11
8 -- C438
9 -- C229
10 -- C164
11 -- C194
12 -- C252
13 -- C331
14 -- C292
15 -- C277
16 -- C185
17 -- C198
18 -- C338
19 -- C657
20 -- C322
21 -- C208
22 -- C209
23 -- C517
24 -- C337
25 -- C642
26 -- C622
27 -- C228
28 -- C222
29 -- C343
30 -- C87
31 -- C148
32 -- C301
33 -- C508
34 -- C571
35 -- C234
36 -- C349
37 -- C93
38 -- C21
39 -- C361
40 -- C532
41 -- C246
42 -- C355
43 -- C99
44 -- C436
45 -- C60
46 -- C421
47 -- C556
48 -- C258
49 -- C44
50 -- C105
51 -- C580
52 -- C481
53 -- C55
54 -- C270
55 -- C367
56 -- C109
57 -- C111
58 -- C116
59 -- C190
60 -- C254
61 -- C538
62 -- C373
63 -- C117
64 -- C266
65 -- C256
66 -- C284
67 -- C550
68 -- C7
69 -- C379
70 -- C123
71 -- C416
72 -- C27
73 -- C314
74 -- C562
75 -- C385
76 -- C129
77 -- C136
78 -- C533
79 -- C667
80 -- C144
81 -- C41
82 -- C573
83 -- C391
84 -- C142
85 -- C33
86 -- C466
87 -- C71
88 -- C585
89 -- C575
90 -- C397
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
--------------------------------------------------------------------------------
1 -- .**********************************************************************
2 -- .*.....................................................................
3 -- ..*....................................................................
4 -- ...*...................................................................
5 -- ....*..................................................................
6 -- .....*.................................................................
7 -- ......*................................................................
8 -- .......*...............................................................
9 -- ........*..............................................................
10 -- .........*.............................................................
11 -- ..........*............................................................
12 -- ...........*...........................................................
13 -- ............*..........................................................
14 -- .............*.........................................................
15 -- ..............*........................................................
16 -- ...............*.......................................................
17 -- ................*......................................................
18 -- .................*.....................................................
19 -- ..................*....................................................
20 -- ...................*...................................................
21 -- ....................*..................................................
22 -- .....................*.................................................
23 -- ......................*................................................
24 -- .......................*...............................................
25 -- ........................*..............................................
26 -- .........................*.............................................
27 -- ..........................*............................................
28 -- ...........................*...........................................
29 -- ............................*..........................................
30 -- .............................*.........................................
31 -- ..............................*........................................
32 -- ...............................*.......................................
33 -- ................................*......................................
34 -- .................................*.....................................
35 -- ..................................*....................................
36 -- ...................................*...................................
37 -- ....................................*..................................
38 -- .....................................*.................................
39 -- ......................................*................................
40 -- .......................................*...............................
41 -- ........................................*..............................
42 -- .........................................*.............................
43 -- ..........................................*............................
44 -- ...........................................*...........................
45 -- ............................................*..........................
46 -- .............................................*.........................
47 -- ..............................................*........................
48 -- ...............................................*.......................
49 -- ................................................*......................
50 -- .................................................*.....................
51 -- ..................................................*....................
52 -- ...................................................*...................
53 -- ....................................................*..................
54 -- .....................................................*.................
55 -- ......................................................*................
56 -- .......................................................*...............
57 -- ........................................................*..............
58 -- .........................................................*.............
59 -- ..........................................................*............
60 -- ...........................................................*...........
61 -- ............................................................*..........
62 -- .............................................................*.........
63 -- ..............................................................*........
64 -- ...............................................................*.......
65 -- ................................................................*......
66 -- .................................................................*.....
67 -- ..................................................................*....
68 -- ...................................................................*...
69 -- ....................................................................*..
70 -- .....................................................................*.
71 -- ......................................................................*
72 -- .......................................................................
73 -- .......................................................................
74 -- .......................................................................
75 -- .......................................................................
76 -- .......................................................................
77 -- .......................................................................
78 -- .......................................................................
79 -- .......................................................................
80 -- .......................................................................
81 -- .......................................................................
82 -- .......................................................................
83 -- .......................................................................
84 -- .......................................................................
85 -- .......................................................................
86 -- .......................................................................
87 -- .......................................................................
88 -- .......................................................................
89 -- .......................................................................
90 -- .......................................................................
91 -- ...*................................................*..................
92 -- ......*............................*.............*.................*...
93 -- ...........*....................................................*......
94 -- .....*...............*.....................*...........................
95 -- .......*................................*......*.......................
96 -- ...*........................................*.......*..................
97 -- ...**....*........*...........*.............*.......*..*.*.....*....*..
98 -- ......*............................................................*...
99 -- ........*.................*............................................
100 -- .........*.....................................................*.......
101 -- ..*.........*....*....................*..*............*.*....*.........
102 -- ......*............................*...............................*...
103 -- ...****..*........**.*........*....*.......**....*..*..*.*.....*...**..
104 -- ......................................................................*
105 -- ..................................................*....................
106 -- ...**....*........*...........*.............*.......*..*.......*....*..
107 -- ...****..*........**.*........*....*.......**....*..*..*.*....**.*.**..
108 -- .................................................................*.....
109 -- .*.....*................................*......*.......................
110 -- .....**..............*.............*.......*.....*.................*...
111 -- ....*..................................................*............*..
112 -- ...****..*....*...**.*.*......*....*.......**....*..*..*.*....**.*.***.
113 -- ...****.**....*...**.*.*..*...*....*.......**....*..*..*.*....**.*.***.
114 -- ...**....*........*...........*.............*.......*..*.......*....*..
115 -- ...**....*........*...........*.............*.......*..*.*.....*....*..
116 -- ...**....*........**..........*.............*.......*..*.*.....*....*..
117 -- ...****..*........*..*........*....*.......**....*..*..*.*.....*...**..
118 -- ...................*...................................................
119 -- ..............................*........................................
120 -- ...............................................................*.......
121 -- ...****.**....*...**.*.*..*.*.*....*.......**....*..*..*.*....**.*.***.
122 -- .........*.....................................................*.......
123 -- ....*.............*....................................*............*..
124 -- .........................................................*.............
125 -- .......*................................*..............................
126 -- .......*.......................................*.......................
127 -- ........................................*......*.......................
128 -- ....*...............................................................*..
129 -- ...****..*........**.*........*....*.......**....*..*..*.*....**...**..
130 -- ..............................................................*..*.....
131 -- .......................................................*............*..
132 -- ....*..................................................*...............
133 -- ...*..........................*.............*.......*..................
134 -- ...****..*........**.*........*....*.......**....*..*..*.*.....*.*.**..
135 -- .....*...............*.................................................
136 -- .....*.....................................*...........................
137 -- .........*.............................................................
138 -- .....................*.................................................
139 -- .....*...............*.....................*...........................
140 -- .....*.....................................*...........................
141 -- .....................*.....................*...........................
142 -- ...****..*....*...**.*.*......*....*.......**....*..*..*.*....**.*.**..
143 -- .....*.................................................................
144 -- .....*...............*.................................................
145 -- ...........................................*...........................
146 -- .....................*.....................*...........................
147 -- ....*....*........*....................................*.......*....*..
148 -- ..............*........*...............................................
149 -- ............................*..........................................
150 -- ....*....*.............................................*.......*....*..
151 -- ...****..*....*...**.*........*....*.......**....*..*..*.*....**.*.**..
152 -- ...****.**....*...**.*.*..*.*.*....*.*.....**....*..*..*.*....**.*.***.
153 -- ...****..*........**.*.*......*....*.......**....*..*..*.*....**.*.**..
154 -- ...**.*..*........*...........*....*........*....*..*..*.*.....*...**..
155 -- ..............*......................................................*.
156 -- ...****.**....*...**.*.*..*...*....*.*.....**....*..*..*.*....**.*.***.
157 -- .......................................................................
158 -- ...***...*........*..*........*............**.......*..*.*.....*....*..
159 -- .......................*.............................................*.
160 -- ...**....*........*...........*.............*.......*..*.*.....*....*..
161 -- ............................*..........................................
162 -- ............................*..........................................
163 -- .......................................................................
164 -- .......................................................................
165 -- ..............*........*.............................................*.
166 -- ..................*....................................*...............
167 -- ............................*..........................................
168 -- ...**.*..*........**..........*....*........*....*..*..*.*.....*...**..
169 -- ..................*...........*........................................
170 -- ...*..............*...........*.............*.......*..................
171 -- ...*.....*....................*.............*.......*..........*.......
172 -- ...****..*........**.*........*....*.......**....*..*..*.*....**.*.**..
173 -- ...****..*....*...**.*........*....*.......**....*..*..*.*....**.*.***.
174 -- ...*.....*........*...........*.............*.......*..........*.......
175 -- ...*........................................*.......*..................
176 -- ...**.............*...........*.............*.......*..*............*..
177 -- ....*....*........*...........*........................*.......*....*..
178 -- ...****..*........**.*.*......*....*.......**....*..*..*.*....**.*.***.
179 -- ...****..*........**.*........*....*.......**....*..*..*.*....**.*.***.
180 -- .........*....................*................................*.......
181 -- ...****..*....*...**.*.*......*....*.*.....**....*..*..*.*....**.*.***.
182 -- ...*..........................*.............*.......*..................
183 -- ...****.**....*...**.*.*..*...*....*.......**....*..*..*.*....**.*.**..
184 -- ...*.....*..................................*.......*..........*.......
185 -- ...**.*..*........**..........*....*........*....*..*..*.*....**.*.**..
--------------------------------------------------------------------------------
ID -- Partition (continued)
--------------------------------------------------------------------------------
1 -- *******************
2 -- ...................
3 -- ...................
4 -- ...................
5 -- ...................
6 -- ...................
7 -- ...................
8 -- ...................
9 -- ...................
10 -- ...................
11 -- ...................
12 -- ...................
13 -- ...................
14 -- ...................
15 -- ...................
16 -- ...................
17 -- ...................
18 -- ...................
19 -- ...................
20 -- ...................
21 -- ...................
22 -- ...................
23 -- ...................
24 -- ...................
25 -- ...................
26 -- ...................
27 -- ...................
28 -- ...................
29 -- ...................
30 -- ...................
31 -- ...................
32 -- ...................
33 -- ...................
34 -- ...................
35 -- ...................
36 -- ...................
37 -- ...................
38 -- ...................
39 -- ...................
40 -- ...................
41 -- ...................
42 -- ...................
43 -- ...................
44 -- ...................
45 -- ...................
46 -- ...................
47 -- ...................
48 -- ...................
49 -- ...................
50 -- ...................
51 -- ...................
52 -- ...................
53 -- ...................
54 -- ...................
55 -- ...................
56 -- ...................
57 -- ...................
58 -- ...................
59 -- ...................
60 -- ...................
61 -- ...................
62 -- ...................
63 -- ...................
64 -- ...................
65 -- ...................
66 -- ...................
67 -- ...................
68 -- ...................
69 -- ...................
70 -- ...................
71 -- ...................
72 -- *..................
73 -- .*.................
74 -- ..*................
75 -- ...*...............
76 -- ....*..............
77 -- .....*.............
78 -- ......*............
79 -- .......*...........
80 -- ........*..........
81 -- .........*.........
82 -- ..........*........
83 -- ...........*.......
84 -- ............*......
85 -- .............*.....
86 -- ..............*....
87 -- ...............*...
88 -- ................*..
89 -- .................*.
90 -- ..................*
91 -- ...................
92 -- ...................
93 -- ...................
94 -- .......*...........
95 -- ...................
96 -- ...................
97 -- .........*..**.....
98 -- ...................
99 -- ...................
100 -- .........*.........
101 -- ...................
102 -- ...................
103 -- ....*..*.*..**.....
104 -- ................*..
105 -- .................*.
106 -- .........*..*......
107 -- ....*..*.*..**.*...
108 -- ...............*...
109 -- ...................
110 -- .......*...........
111 -- ...................
112 -- ....*..*.*..**.*...
113 -- ....*..*.*..**.*...
114 -- .........*..**.....
115 -- ....*....*..**.....
116 -- ....*....*..**.....
117 -- .......*.*..**.....
118 -- ....*..............
119 -- ............*......
120 -- .........*.........
121 -- *...**.***..**.*...
122 -- ...................
123 -- ...................
124 -- .............*.....
125 -- ...................
126 -- ...................
127 -- ...................
128 -- ...................
129 -- ....*..*.*..**.....
130 -- ...............*...
131 -- ...................
132 -- ...................
133 -- ............*......
134 -- ....*..*.*..**.*...
135 -- .......*...........
136 -- .......*...........
137 -- .........*.........
138 -- .......*...........
139 -- ...................
140 -- ...................
141 -- .......*...........
142 -- ....*..*.*..**.*...
143 -- .......*...........
144 -- ...................
145 -- .......*...........
146 -- ...................
147 -- .........*.........
148 -- ...................
149 -- *....*..*..........
150 -- .........*.........
151 -- ....*..*.*..**.*...
152 -- *...**.***..**.*...
153 -- ....*..*.*..**.*...
154 -- .........*..**.....
155 -- ...................
156 -- ....*..*.*..**.*...
157 -- *....*.............
158 -- .......*.*..**.....
159 -- ...................
160 -- .........*..*......
161 -- ........*..........
162 -- *..................
163 -- *.......*..........
164 -- .....*..*..........
165 -- ...................
166 -- ...................
167 -- .....*.............
168 -- ....*....*..**.....
169 -- ............*......
170 -- ............*......
171 -- .........*..*......
172 -- ....*..*.*..**.....
173 -- ....*..*.*..**.*...
174 -- .........*..*......
175 -- ............*......
176 -- ............*......
177 -- .........*..*......
178 -- ....*..*.*..**.*...
179 -- ....*..*.*..**.*...
180 -- .........*..*......
181 -- ....*..*.*..**.*...
182 -- ...................
183 -- ....*..*.*..**.*...
184 -- .........*.........
185 -- ....*....*..**.*...
--------------------------------------------------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
-----------------------------------------------------------------
91 3002 1.000000 0.000000 1.000000 1.000000 2
92 3002 1.000000 0.000000 1.000000 1.000000 2
93 3002 1.000000 0.000000 1.000000 1.000000 2
94 3002 1.000000 0.000000 1.000000 1.000000 2
95 3002 1.000000 0.000000 1.000000 1.000000 2
96 3001 0.999667 0.000471 0.999334 1.000000 2
97 2997 0.998334 0.002355 0.996669 1.000000 2
98 2971 0.989674 0.001413 0.988674 0.990673 2
99 2941 0.979680 0.007066 0.974684 0.984677 2
100 2888 0.962025 0.011306 0.954031 0.970020 2
101 2850 0.949367 0.027323 0.930047 0.968688 2
102 2796 0.931379 0.010364 0.924051 0.938708 2
103 2637 0.878414 0.026852 0.859427 0.897402 2
104 2602 0.866755 0.021670 0.851432 0.882079 2
105 2599 0.865756 0.056060 0.826116 0.905396 2
106 2515 0.837775 0.068308 0.789474 0.886076 2
107 2182 0.726849 0.037687 0.700200 0.753498 2
108 2121 0.706529 0.020257 0.692205 0.720853 2
109 1759 0.585943 0.056060 0.546302 0.625583 2
110 1732 0.576949 0.000000 0.576949 0.576949 2
111 1707 0.568621 0.018373 0.555630 0.581612 2
112 1686 0.561626 0.018844 0.548301 0.574950 2
113 1552 0.516989 0.006595 0.512325 0.521652 2
114 1506 0.501666 0.119657 0.417055 0.586276 2
115 1488 0.495670 0.120599 0.410393 0.580946 2
116 1488 0.495670 0.120599 0.410393 0.580946 2
117 1460 0.486342 0.118715 0.402398 0.570286 2
118 1396 0.465023 0.119657 0.380413 0.549634 2
119 1391 0.463358 0.015546 0.452365 0.474350 2
120 1198 0.399067 0.045225 0.367089 0.431046 2
121 1186 0.395070 0.003769 0.392405 0.397735 2
122 1176 0.391739 0.008480 0.385743 0.397735 2
123 1098 0.365756 0.009422 0.359094 0.372418 2
124 1066 0.355097 0.096102 0.287142 0.423051 2
125 1006 0.335110 0.005653 0.331113 0.339107 2
126 1000 0.333111 0.017901 0.320453 0.345769 2
127 996 0.331779 0.023555 0.315123 0.348434 2
128 811 0.270153 0.008951 0.263824 0.276482 2
129 786 0.261825 0.010364 0.254497 0.269154 2
130 756 0.251832 0.014133 0.241839 0.261825 2
131 741 0.246835 0.000471 0.246502 0.247169 2
132 725 0.241506 0.003298 0.239174 0.243837 2
133 709 0.236176 0.057002 0.195869 0.276482 2
134 682 0.227182 0.033919 0.203198 0.251166 2
135 624 0.207861 0.003769 0.205197 0.210526 2
136 623 0.207528 0.002355 0.205863 0.209194 2
137 615 0.204863 0.030621 0.183211 0.226516 2
138 614 0.204530 0.017901 0.191872 0.217189 2
139 606 0.201865 0.013191 0.192538 0.211193 2
140 602 0.200533 0.004711 0.197202 0.203864 2
141 598 0.199201 0.005653 0.195203 0.203198 2
142 597 0.198867 0.024968 0.181213 0.216522 2
143 596 0.198534 0.009422 0.191872 0.205197 2
144 583 0.194204 0.011777 0.185876 0.202532 2
145 579 0.192871 0.005182 0.189207 0.196536 2
146 579 0.192871 0.021199 0.177881 0.207861 2
147 567 0.188874 0.009893 0.181879 0.195869 2
148 563 0.187542 0.014604 0.177215 0.197868 2
149 530 0.176549 0.023555 0.159893 0.193205 2
150 517 0.172219 0.004240 0.169221 0.175217 2
151 488 0.162558 0.010364 0.155230 0.169887 2
152 477 0.158894 0.018373 0.145903 0.171885 2
153 463 0.154231 0.016488 0.142572 0.165889 2
154 459 0.152898 0.022141 0.137242 0.168554 2
155 455 0.151566 0.010835 0.143904 0.159227 2
156 454 0.151233 0.038629 0.123917 0.178548 2
157 453 0.150899 0.003298 0.148568 0.153231 2
158 448 0.149234 0.019786 0.135243 0.163225 2
159 439 0.146236 0.016488 0.134577 0.157895 2
160 425 0.141572 0.021199 0.126582 0.156562 2
161 423 0.140906 0.001413 0.139907 0.141905 2
162 423 0.140906 0.006124 0.136576 0.145237 2
163 414 0.137908 0.006595 0.133245 0.142572 2
164 396 0.131912 0.013191 0.122585 0.141239 2
165 395 0.131579 0.018373 0.118588 0.144570 2
166 395 0.131579 0.000471 0.131246 0.131912 2
167 394 0.131246 0.008480 0.125250 0.137242 2
168 384 0.127915 0.043340 0.097268 0.158561 2
169 358 0.119254 0.003769 0.116589 0.121919 2
170 353 0.117588 0.008951 0.111259 0.123917 2
171 352 0.117255 0.032034 0.094604 0.139907 2
172 331 0.110260 0.011777 0.101932 0.118588 2
173 327 0.108927 0.024968 0.091272 0.126582 2
174 326 0.108594 0.022612 0.092605 0.124584 2
175 325 0.108261 0.025910 0.089940 0.126582 2
176 325 0.108261 0.024026 0.091272 0.125250 2
177 318 0.105929 0.010364 0.098601 0.113258 2
178 308 0.102598 0.004711 0.099267 0.105929 2
179 308 0.102598 0.009422 0.095936 0.109260 2
180 298 0.099267 0.015075 0.088608 0.109927 2
181 296 0.098601 0.024497 0.081279 0.115923 2
182 290 0.096602 0.016017 0.085276 0.107928 2
183 285 0.094937 0.033447 0.071286 0.118588 2
184 280 0.093271 0.014133 0.083278 0.103264 2
185 224 0.074617 0.049936 0.039307 0.109927 2
-----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
--------------------------------------------------------------------------------------------
length{all}[1] 0.001914 0.000002 0.000031 0.004489 0.001650 1.000 2
length{all}[2] 0.002399 0.000002 0.000063 0.005512 0.002137 1.000 2
length{all}[3] 0.000962 0.000001 0.000001 0.002855 0.000693 1.002 2
length{all}[4] 0.002797 0.000003 0.000363 0.005995 0.002472 1.000 2
length{all}[5] 0.000959 0.000001 0.000000 0.002856 0.000668 1.000 2
length{all}[6] 0.003162 0.000006 0.000086 0.008068 0.002554 1.007 2
length{all}[7] 0.001166 0.000002 0.000001 0.003564 0.000744 1.000 2
length{all}[8] 0.000964 0.000001 0.000000 0.003010 0.000643 1.000 2
length{all}[9] 0.000965 0.000001 0.000000 0.002908 0.000681 1.003 2
length{all}[10] 0.001725 0.000002 0.000008 0.004353 0.001382 1.000 2
length{all}[11] 0.001007 0.000001 0.000001 0.003180 0.000657 1.003 2
length{all}[12] 0.000956 0.000001 0.000000 0.002845 0.000671 1.001 2
length{all}[13] 0.004893 0.000005 0.001242 0.009163 0.004581 1.005 2
length{all}[14] 0.001027 0.000001 0.000000 0.003161 0.000694 1.000 2
length{all}[15] 0.008556 0.000009 0.003052 0.014603 0.008197 1.000 2
length{all}[16] 0.003918 0.000004 0.000666 0.007821 0.003524 1.004 2
length{all}[17] 0.000955 0.000001 0.000000 0.002861 0.000672 1.000 2
length{all}[18] 0.000924 0.000001 0.000002 0.002775 0.000626 1.000 2
length{all}[19] 0.020394 0.000030 0.009865 0.030845 0.019768 1.002 2
length{all}[20] 0.001142 0.000001 0.000000 0.003407 0.000754 1.001 2
length{all}[21] 0.001955 0.000002 0.000041 0.004561 0.001615 1.003 2
length{all}[22] 0.001598 0.000003 0.000001 0.004773 0.001088 1.000 2
length{all}[23] 0.000950 0.000001 0.000001 0.002848 0.000650 1.001 2
length{all}[24] 0.001948 0.000002 0.000107 0.004623 0.001612 1.001 2
length{all}[25] 0.002917 0.000003 0.000390 0.006067 0.002618 1.001 2
length{all}[26] 0.000935 0.000001 0.000001 0.002724 0.000684 1.007 2
length{all}[27] 0.001003 0.000001 0.000001 0.002971 0.000704 1.000 2
length{all}[28] 0.000949 0.000001 0.000001 0.002952 0.000643 1.000 2
length{all}[29] 0.001832 0.000002 0.000032 0.004444 0.001498 1.000 2
length{all}[30] 0.000993 0.000001 0.000000 0.002939 0.000704 1.001 2
length{all}[31] 0.000937 0.000001 0.000000 0.002699 0.000647 1.000 2
length{all}[32] 0.002829 0.000003 0.000261 0.006038 0.002497 1.000 2
length{all}[33] 0.000943 0.000001 0.000001 0.002812 0.000671 1.000 2
length{all}[34] 0.000931 0.000001 0.000000 0.002838 0.000638 1.000 2
length{all}[35] 0.001978 0.000002 0.000068 0.004823 0.001618 1.000 2
length{all}[36] 0.002083 0.000002 0.000081 0.004973 0.001750 1.000 2
length{all}[37] 0.001874 0.000002 0.000025 0.004558 0.001549 1.000 2
length{all}[38] 0.001405 0.000002 0.000000 0.004228 0.000959 1.000 2
length{all}[39] 0.000936 0.000001 0.000000 0.002836 0.000622 1.000 2
length{all}[40] 0.000927 0.000001 0.000000 0.002780 0.000651 1.002 2
length{all}[41] 0.000990 0.000001 0.000000 0.002826 0.000718 1.001 2
length{all}[42] 0.000950 0.000001 0.000000 0.002906 0.000648 1.000 2
length{all}[43] 0.000982 0.000001 0.000001 0.002881 0.000690 1.001 2
length{all}[44] 0.001584 0.000003 0.000000 0.004749 0.001084 1.000 2
length{all}[45] 0.002398 0.000003 0.000010 0.005489 0.002055 1.000 2
length{all}[46] 0.000937 0.000001 0.000000 0.002674 0.000669 1.001 2
length{all}[47] 0.000943 0.000001 0.000000 0.002810 0.000645 1.001 2
length{all}[48] 0.003845 0.000004 0.000903 0.007663 0.003523 1.000 2
length{all}[49] 0.002890 0.000003 0.000292 0.005915 0.002550 1.000 2
length{all}[50] 0.001073 0.000001 0.000000 0.003261 0.000758 1.000 2
length{all}[51] 0.001082 0.000001 0.000000 0.003193 0.000773 1.001 2
length{all}[52] 0.000933 0.000001 0.000000 0.002710 0.000652 1.000 2
length{all}[53] 0.001903 0.000002 0.000098 0.004444 0.001592 1.002 2
length{all}[54] 0.000965 0.000001 0.000001 0.002903 0.000654 1.000 2
length{all}[55] 0.000970 0.000001 0.000001 0.003015 0.000678 1.000 2
length{all}[56] 0.001892 0.000002 0.000037 0.004597 0.001589 1.000 2
length{all}[57] 0.000949 0.000001 0.000000 0.002774 0.000677 1.000 2
length{all}[58] 0.002511 0.000005 0.000003 0.006676 0.002024 1.006 2
length{all}[59] 0.000941 0.000001 0.000000 0.002877 0.000637 1.000 2
length{all}[60] 0.003696 0.000004 0.000591 0.007420 0.003390 1.003 2
length{all}[61] 0.001000 0.000001 0.000001 0.003016 0.000722 1.000 2
length{all}[62] 0.000949 0.000001 0.000000 0.002961 0.000649 1.001 2
length{all}[63] 0.002855 0.000003 0.000331 0.006019 0.002540 1.001 2
length{all}[64] 0.002917 0.000003 0.000404 0.006286 0.002585 1.001 2
length{all}[65] 0.000940 0.000001 0.000001 0.002761 0.000629 1.000 2
length{all}[66] 0.001313 0.000001 0.000000 0.003649 0.000974 1.000 2
length{all}[67] 0.000920 0.000001 0.000001 0.002654 0.000647 1.000 2
length{all}[68] 0.002319 0.000003 0.000063 0.005386 0.001923 1.000 2
length{all}[69] 0.000979 0.000001 0.000000 0.002977 0.000668 1.001 2
length{all}[70] 0.001689 0.000002 0.000000 0.004334 0.001319 1.000 2
length{all}[71] 0.003013 0.000003 0.000397 0.006214 0.002736 1.002 2
length{all}[72] 0.000975 0.000001 0.000000 0.002966 0.000664 1.000 2
length{all}[73] 0.000978 0.000001 0.000001 0.002978 0.000644 1.000 2
length{all}[74] 0.000907 0.000001 0.000001 0.002760 0.000643 1.000 2
length{all}[75] 0.000963 0.000001 0.000000 0.002963 0.000654 1.003 2
length{all}[76] 0.004180 0.000010 0.000007 0.009952 0.003606 1.014 2
length{all}[77] 0.002837 0.000003 0.000398 0.006378 0.002484 1.000 2
length{all}[78] 0.000917 0.000001 0.000000 0.002678 0.000639 1.001 2
length{all}[79] 0.001647 0.000003 0.000000 0.004868 0.001128 1.000 2
length{all}[80] 0.003884 0.000004 0.000650 0.007539 0.003609 1.000 2
length{all}[81] 0.003662 0.000004 0.000710 0.007564 0.003284 1.000 2
length{all}[82] 0.000945 0.000001 0.000000 0.002782 0.000674 1.000 2
length{all}[83] 0.000983 0.000001 0.000000 0.002917 0.000671 1.002 2
length{all}[84] 0.002963 0.000003 0.000250 0.006610 0.002624 1.000 2
length{all}[85] 0.005605 0.000006 0.001367 0.010087 0.005362 1.001 2
length{all}[86] 0.000966 0.000001 0.000000 0.002943 0.000665 1.000 2
length{all}[87] 0.101447 0.000287 0.073627 0.134186 0.102601 1.003 2
length{all}[88] 0.001034 0.000001 0.000002 0.002880 0.000770 1.000 2
length{all}[89] 0.001117 0.000001 0.000001 0.003354 0.000809 1.006 2
length{all}[90] 0.001941 0.000002 0.000025 0.004601 0.001616 1.001 2
length{all}[91] 0.004294 0.000004 0.000848 0.008497 0.003960 1.001 2
length{all}[92] 0.011369 0.000018 0.003925 0.019779 0.010850 1.005 2
length{all}[93] 0.006672 0.000006 0.002332 0.011222 0.006367 1.000 2
length{all}[94] 0.024492 0.000053 0.012030 0.039525 0.023705 1.000 2
length{all}[95] 0.003278 0.000004 0.000560 0.007175 0.002918 1.000 2
length{all}[96] 0.003819 0.000004 0.000772 0.007728 0.003489 1.003 2
length{all}[97] 0.009169 0.000013 0.002437 0.016194 0.008815 1.006 2
length{all}[98] 0.002377 0.000003 0.000024 0.005755 0.002021 1.000 2
length{all}[99] 0.004312 0.000004 0.000811 0.008614 0.003945 1.000 2
length{all}[100] 0.002828 0.000003 0.000383 0.006052 0.002518 1.000 2
length{all}[101] 0.001802 0.000002 0.000093 0.004362 0.001424 1.001 2
length{all}[102] 0.002042 0.000002 0.000007 0.004658 0.001739 1.000 2
length{all}[103] 0.004588 0.000006 0.000679 0.009409 0.004132 1.014 2
length{all}[104] 0.001945 0.000002 0.000007 0.004637 0.001664 1.000 2
length{all}[105] 0.001864 0.000002 0.000094 0.004401 0.001586 1.000 2
length{all}[106] 0.002679 0.000003 0.000026 0.005958 0.002324 1.005 2
length{all}[107] 0.001895 0.000002 0.000009 0.004553 0.001547 1.000 2
length{all}[108] 0.001949 0.000002 0.000035 0.004563 0.001582 1.003 2
length{all}[109] 0.001990 0.000002 0.000028 0.004805 0.001645 1.002 2
length{all}[110] 0.005032 0.000013 0.000003 0.011844 0.004380 1.006 2
length{all}[111] 0.001844 0.000002 0.000005 0.004473 0.001490 1.000 2
length{all}[112] 0.002025 0.000002 0.000083 0.004741 0.001730 1.000 2
length{all}[113] 0.002125 0.000002 0.000082 0.004976 0.001849 1.000 2
length{all}[114] 0.003966 0.000004 0.000732 0.007943 0.003646 1.002 2
length{all}[115] 0.005793 0.000006 0.001705 0.010509 0.005485 1.001 2
length{all}[116] 0.005124 0.000005 0.001130 0.009727 0.004834 1.010 2
length{all}[117] 0.007104 0.000008 0.002214 0.013172 0.006673 1.004 2
length{all}[118] 0.003567 0.000004 0.000565 0.007251 0.003230 0.999 2
length{all}[119] 0.001513 0.000002 0.000001 0.003890 0.001178 1.001 2
length{all}[120] 0.001492 0.000002 0.000003 0.003953 0.001184 1.005 2
length{all}[121] 0.001828 0.000002 0.000067 0.004406 0.001434 1.007 2
length{all}[122] 0.001404 0.000002 0.000003 0.004011 0.001014 0.999 2
length{all}[123] 0.001861 0.000002 0.000008 0.004561 0.001565 1.006 2
length{all}[124] 0.002610 0.000003 0.000128 0.005957 0.002239 1.004 2
length{all}[125] 0.000935 0.000001 0.000001 0.002890 0.000680 0.999 2
length{all}[126] 0.000956 0.000001 0.000001 0.002810 0.000670 0.999 2
length{all}[127] 0.000897 0.000001 0.000001 0.002518 0.000665 1.002 2
length{all}[128] 0.000992 0.000001 0.000001 0.003075 0.000661 0.999 2
length{all}[129] 0.000948 0.000001 0.000001 0.002712 0.000687 0.999 2
length{all}[130] 0.000997 0.000001 0.000002 0.003051 0.000721 0.999 2
length{all}[131] 0.001000 0.000001 0.000000 0.002981 0.000732 0.999 2
length{all}[132] 0.000955 0.000001 0.000001 0.002871 0.000693 0.999 2
length{all}[133] 0.001535 0.000002 0.000000 0.004290 0.001279 1.003 2
length{all}[134] 0.000995 0.000001 0.000000 0.002941 0.000671 0.999 2
length{all}[135] 0.001618 0.000002 0.000002 0.004499 0.001216 1.000 2
length{all}[136] 0.001659 0.000003 0.000001 0.004701 0.001143 0.998 2
length{all}[137] 0.000927 0.000001 0.000003 0.002543 0.000674 1.003 2
length{all}[138] 0.001745 0.000003 0.000000 0.005169 0.001264 1.002 2
length{all}[139] 0.001657 0.000003 0.000010 0.005164 0.001102 0.998 2
length{all}[140] 0.001494 0.000002 0.000001 0.004602 0.000992 0.999 2
length{all}[141] 0.001704 0.000003 0.000009 0.004998 0.001135 1.000 2
length{all}[142] 0.001276 0.000001 0.000007 0.003545 0.000952 0.999 2
length{all}[143] 0.001612 0.000003 0.000004 0.004987 0.001073 0.999 2
length{all}[144] 0.001606 0.000002 0.000001 0.004826 0.001174 1.000 2
length{all}[145] 0.001507 0.000002 0.000002 0.004508 0.001023 1.000 2
length{all}[146] 0.001496 0.000002 0.000001 0.004661 0.001129 0.998 2
length{all}[147] 0.001507 0.000002 0.000004 0.004340 0.001108 0.999 2
length{all}[148] 0.000908 0.000001 0.000004 0.002703 0.000610 1.000 2
length{all}[149] 0.001316 0.000001 0.000002 0.003457 0.001050 1.004 2
length{all}[150] 0.001511 0.000002 0.000000 0.003980 0.001148 0.999 2
length{all}[151] 0.000963 0.000001 0.000000 0.002906 0.000714 0.999 2
length{all}[152] 0.001787 0.000002 0.000109 0.004295 0.001385 0.999 2
length{all}[153] 0.000951 0.000001 0.000001 0.002913 0.000682 0.998 2
length{all}[154] 0.003070 0.000008 0.000013 0.009405 0.002161 1.001 2
length{all}[155] 0.001022 0.000001 0.000001 0.003315 0.000638 1.000 2
length{all}[156] 0.002115 0.000002 0.000025 0.004664 0.001786 0.998 2
length{all}[157] 0.001058 0.000001 0.000000 0.003295 0.000724 0.998 2
length{all}[158] 0.002719 0.000006 0.000003 0.007551 0.001986 1.010 2
length{all}[159] 0.000915 0.000001 0.000002 0.002659 0.000672 0.998 2
length{all}[160] 0.002180 0.000002 0.000088 0.005110 0.001924 0.998 2
length{all}[161] 0.000995 0.000001 0.000003 0.003109 0.000661 1.007 2
length{all}[162] 0.000973 0.000001 0.000000 0.003121 0.000681 1.010 2
length{all}[163] 0.000938 0.000001 0.000000 0.002818 0.000634 0.999 2
length{all}[164] 0.001103 0.000001 0.000003 0.003370 0.000714 1.015 2
length{all}[165] 0.001040 0.000001 0.000004 0.002981 0.000778 1.001 2
length{all}[166] 0.001455 0.000001 0.000011 0.003782 0.001155 0.998 2
length{all}[167] 0.000997 0.000001 0.000001 0.002867 0.000717 1.002 2
length{all}[168] 0.004047 0.000005 0.000071 0.008462 0.003609 0.998 2
length{all}[169] 0.001475 0.000002 0.000011 0.003827 0.001207 0.997 2
length{all}[170] 0.001499 0.000002 0.000001 0.003929 0.001232 0.999 2
length{all}[171] 0.001300 0.000002 0.000008 0.003630 0.001008 0.999 2
length{all}[172] 0.001486 0.000001 0.000002 0.003813 0.001171 0.999 2
length{all}[173] 0.000956 0.000001 0.000000 0.002729 0.000715 1.000 2
length{all}[174] 0.001287 0.000002 0.000001 0.003685 0.000920 1.002 2
length{all}[175] 0.000922 0.000001 0.000002 0.002619 0.000698 0.997 2
length{all}[176] 0.000943 0.000001 0.000012 0.002754 0.000660 0.999 2
length{all}[177] 0.000990 0.000001 0.000001 0.003031 0.000755 0.997 2
length{all}[178] 0.001007 0.000001 0.000005 0.002879 0.000660 0.997 2
length{all}[179] 0.000939 0.000001 0.000001 0.002822 0.000660 0.998 2
length{all}[180] 0.001252 0.000001 0.000001 0.003395 0.000906 1.003 2
length{all}[181] 0.002104 0.000002 0.000033 0.004930 0.001894 1.016 2
length{all}[182] 0.000892 0.000001 0.000004 0.002298 0.000703 1.010 2
length{all}[183] 0.001971 0.000002 0.000090 0.004734 0.001611 1.044 2
length{all}[184] 0.001078 0.000001 0.000004 0.003416 0.000756 0.996 2
length{all}[185] 0.002185 0.000002 0.000057 0.005241 0.001766 1.000 2
--------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.022677
Maximum standard deviation of split frequencies = 0.120599
Average PSRF for parameter values (excluding NA and >10.0) = 1.001
Maximum PSRF for parameter values = 1.044
Clade credibility values:
/--------------------------------------------------------------------- C422 (1)
|
|--------------------------------------------------------------------- C194 (11)
|
|--------------------------------------------------------------------- C292 (14)
|
|--------------------------------------------------------------------- C185 (16)
|
|--------------------------------------------------------------------- C198 (17)
|
|--------------------------------------------------------------------- C208 (21)
|
|--------------------------------------------------------------------- C517 (23)
|
|--------------------------------------------------------------------- C642 (25)
|
|--------------------------------------------------------------------- C622 (26)
|
|--------------------------------------------------------------------- C222 (28)
|
|--------------------------------------------------------------------- C343 (29)
|
|--------------------------------------------------------------------- C87 (30)
|
|--------------------------------------------------------------------- C301 (32)
|
|--------------------------------------------------------------------- C508 (33)
|
|--------------------------------------------------------------------- C571 (34)
|
|--------------------------------------------------------------------- C234 (35)
|
|--------------------------------------------------------------------- C93 (37)
|
|--------------------------------------------------------------------- C21 (38)
|
|--------------------------------------------------------------------- C532 (40)
|
|--------------------------------------------------------------------- C99 (43)
|
|--------------------------------------------------------------------- C421 (46)
|
|--------------------------------------------------------------------- C556 (47)
|
|--------------------------------------------------------------------- C44 (49)
|
|--------------------------------------------------------------------- C481 (52)
|
|--------------------------------------------------------------------- C270 (54)
|
|--------------------------------------------------------------------- C190 (59)
|
|--------------------------------------------------------------------- C254 (60)
|
|--------------------------------------------------------------------- C538 (61)
|
|--------------------------------------------------------------------- C550 (67)
|
|--------------------------------------------------------------------- C27 (72)
|
|--------------------------------------------------------------------- C314 (73)
|
|--------------------------------------------------------------------- C562 (74)
|
|--------------------------------------------------------------------- C385 (75)
|
|--------------------------------------------------------------------- C136 (77)
|
|--------------------------------------------------------------------- C533 (78)
|
|--------------------------------------------------------------------- C144 (80)
|
|--------------------------------------------------------------------- C573 (82)
|
|--------------------------------------------------------------------- C391 (83)
|
|--------------------------------------------------------------------- C466 (86)
|
|--------------------------------------------------------------------- C397 (90)
|
| /------- C252 (12)
|-----------------------------100-----------------------------+
| \------- C256 (65)
|
| /------- C325 (3)
| |
+ |------- C331 (13)
| |
| |------- C338 (18)
| |
| |------- C361 (39)
|------------------------------95-----------------------------+
| |------- C355 (42)
| |
| |------- C367 (55)
| |
| |------- C111 (57)
| |
| \------- C373 (62)
|
| /------- C416 (71)
|------------------------------87-----------------------------+
| \------- C585 (88)
|
| /------- C580 (51)
|------------------------------87-----------------------------+
| \------- C575 (89)
|
| /-------------- C65 (2)
| |
|--------------------------59--------------------------+ /------- C438 (8)
| | |
| \--100-+------- C246 (41)
| |
| \------- C258 (48)
|
| /------- C183 (4)
| /--100-+
| | \------- C55 (53)
| /--100-+
| | \-------------- C60 (45)
| |
| | /------- C150 (5)
| | |
| |------57-----+------- C109 (56)
| | |
| | \------- C379 (69)
| |
| | /------- C164 (10)
| /--84--+ |
| | |------96-----+------- C266 (64)
| | | |
| | | \------- C41 (81)
| | |
| | |--------------------- C657 (19)
| /--50-+ |
| | | |--------------------- C148 (31)
| | | |
| | | \--------------------- C142 (84)
| /--100-+ |
| | | \---------------------------- C33 (85)
| | |
| | \---------------------------------- C116 (58)
| |
| | /------- C182 (6)
| | |
| | |------- C209 (22)
| | /---------100--------+
| | | |------- C436 (44)
| | | |
| | | \------- C667 (79)
| /--88--+ |
| | |-----58-----+ /------- C11 (7)
| | | | /--99--+
| | | | | \------- C7 (68)
| | | | /--93--+
| | | | | \-------------- C349 (36)
| | | \--100-+
| | | \--------------------- C105 (50)
| /--73--+ |
| | | |----------------------------------------- C322 (20)
| | | |
| | | \----------------------------------------- C129 (76)
| | |
| | |------------------------------------------------ C117 (63)
| | |
| | | /------- C284 (66)
| /--56--+ \-------------------71-------------------+
| | | \------- C71 (87)
| | |
| | |------------------------------------------------------- C277 (15)
| | |
\--52--+ |------------------------------------------------------- C337 (24)
| |
| \------------------------------------------------------- C123 (70)
|
| /------- C229 (9)
\--------------------------98--------------------------+
\------- C228 (27)
Phylogram (based on average branch lengths):
/- C422 (1)
|
| C194 (11)
|
| C292 (14)
|
|-- C185 (16)
|
| C198 (17)
|
|- C208 (21)
|
| C517 (23)
|
|-- C642 (25)
|
| C622 (26)
|
| C222 (28)
|
|- C343 (29)
|
| C87 (30)
|
|-- C301 (32)
|
| C508 (33)
|
| C571 (34)
|
|- C234 (35)
|
|- C93 (37)
|
|- C21 (38)
|
| C532 (40)
|
| C99 (43)
|
| C421 (46)
|
| C556 (47)
|
|-- C44 (49)
|
| C481 (52)
|
| C270 (54)
|
| C190 (59)
|
|-- C254 (60)
|
| C538 (61)
|
| C550 (67)
|
| C27 (72)
|
| C314 (73)
|
| C562 (74)
|
| C385 (75)
|
|-- C136 (77)
|
| C533 (78)
|
|-- C144 (80)
|
| C573 (82)
|
| C391 (83)
|
| C466 (86)
|
|- C397 (90)
|
| /- C252 (12)
|---+
| \ C256 (65)
|
|/ C325 (3)
||
+|--- C331 (13)
||
|| C338 (18)
||
|| C361 (39)
|+
|| C355 (42)
||
|| C367 (55)
||
|| C111 (57)
||
|\ C373 (62)
|
|/-- C416 (71)
|+
|\- C585 (88)
|
|/- C580 (51)
|+
|\- C575 (89)
|
|/- C65 (2)
||
|+ / C438 (8)
|| |
|\-+ C246 (41)
| |
| \-- C258 (48)
|
| /-- C183 (4)
| /-+
| | \- C55 (53)
| /--+
| | \- C60 (45)
| |
| |/- C150 (5)
| ||
| |+- C109 (56)
| ||
| |\- C379 (69)
| |
| | /- C164 (10)
| /+ |
| ||-+-- C266 (64)
| || |
| || \-- C41 (81)
| ||
| ||------------- C657 (19)
| /-+|
| | ||- C148 (31)
| | ||
| | |\-- C142 (84)
| /-----+ |
| | | \--- C33 (85)
| | |
| | \- C116 (58)
| |
| | /-- C182 (6)
| | |
| | |- C209 (22)
| | /--------------+
| | | |- C436 (44)
| | | |
| | | \- C667 (79)
| /--+ |
| | |--+ /- C11 (7)
| | | | /+
| | | | |\- C7 (68)
| | | | /+
| | | | |\- C349 (36)
| | | \------+
| | | \ C105 (50)
| /+ |
| || | C322 (20)
| || |
| || \-- C129 (76)
| ||
| ||-- C117 (63)
| ||
| ||/- C284 (66)
|/+\+
||| \------------------------------------------------------------------ C71 (87)
|||
|||------ C277 (15)
|||
\+|- C337 (24)
||
|\- C123 (70)
|
| / C229 (9)
\--+
\ C228 (27)
|-----------| 0.020 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
Running FUBAR...
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\
***************** TYPES OF STANDARD ANALYSES *****************
(1) Selection Analyses
(2) Evolutionary Hypothesis Testing
(3) Relative evolutionary rate inference
(4) Coevolutionary analysis
(5) Basic Analyses
(6) Codon Selection Analyses
(7) Compartmentalization
(8) Data File Tools
(9) Miscellaneous
(10) Model Comparison
(11) Kernel Analysis Tools
(12) Molecular Clock
(13) Phylogeny Reconstruction
(14) Positive Selection
(15) Recombination
(16) Selection/Recombination
(17) Relative Rate
(18) Relative Ratio
(19) Substitution Rates
Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' *****************
(1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution).
(2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood).
(3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting).
(4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection).
(5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification).
(6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood).
(7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation).
Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types):
Analysis Description
--------------------
Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a
coding sequence alignment to determine whether some sites have been
subject to pervasive purifying or diversifying selection. v2.1
introduces two more methods for estimating the posterior distribution of
grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation
Bayes approximation (fastest). Please note that a FUBAR analysis
generates a cache and a results JSON file in the same directory as
directory as the original alignment. HyPhy needs to have write
privileges to this directory. For example if the original file is in
/home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there
will also exist FUBAR-generated files
/home/sergei/FUBAR/data/pol.nex.FUBAR.json,
/home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide
checkpointing so that a partially completed analysis can be restarted.
- __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree
(one per partition)
- __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring
selection (2013), Mol Biol Evol. 30(5):1196-205
- __Written by__: Sergei L Kosakovsky Pond
- __Contact Information__: spond@temple.edu
- __Analysis Version__: 2.1
####Choose Genetic Code
1. [**Universal**] Universal code. (Genebank transl_table=1).
2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2).
3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3).
4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4).
5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5).
6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6).
7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9).
8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10).
9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12).
10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13).
11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14).
12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15).
13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16).
14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21).
15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22).
16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23).
17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24).
18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25).
19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26).
>Please choose an option (or press q to cancel selection):
>Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`)
>A tree was found in the data file: `(C422,C194,C292,C185,C198,C208,C517,C642,C622,C222,C343,C87,C301,C508,C571,C234,C93,C21,C532,C99,C421,C556,C44,C481,C270,C190,C254,C538,C550,C27,C314,C562,C385,C136,C533,C144,C573,C391,C466,C397,(C252,C256),(C325,C331,C338,C361,C355,C367,C111,C373),(C416,C585),(C580,C575),(C65,(C438,C246,C258)),(((((((((C183,C55),C60),(C150,C109,C379),(C164,C266,C41),C657,C148,C142),C33),C116),((C182,C209,C436,C667),(((C11,C7),C349),C105)),C322,C129),C117,(C284,C71)),C277,C337,C123),(C229,C228)))`
>Would you like to use it (y/n)?
>Loaded a multiple sequence alignment with **90** sequences, **224** codons, and **1** partitions from `/data//pss_subsets/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1.fna`
> FUBAR will write cache and result files to _/data//pss_subsets/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1.fna.FUBAR.json_, respectively
> Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer):
####Posterior estimation method
1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation)
2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed)
3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default)
>Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5):
### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model
* Log(L) = -2488.23, AIC-c = 5220.96 (122 estimated parameters)
* Tree length (expected substitutions/site) for partition 1 : 0.492
### Computing the phylogenetic likelihood function on the grid
* Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid
* Best scaling achieved for
* synonymous rate = 1.227
* non-synonymous rate = 0.714
* Computing conditional site likelihoods on a 20 x 20 rate grid
### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights
* Using the following settings
* Dirichlet alpha : 0.5
### Tabulating site-level results
| Codon | Partition | alpha | beta |Posterior prob for positive selection|
|:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:|
| 80 | 1 | 0.896 | 5.378 | Pos. posterior = 0.9146 |
| 168 | 1 | 0.705 | 4.272 | Pos. posterior = 0.9061 |
| 182 | 1 | 1.871 | 11.444 | Pos. posterior = 0.9218 |
| 196 | 1 | 1.450 | 8.228 | Pos. posterior = 0.9062 |
----
## FUBAR inferred 4 sites subject to diversifying positive selection at posterior probability >= 0.9
Of these, 0.35 are expected to be false positives (95% confidence interval of 0-2 )
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.20 sec, SCORE=999, Nseq=90, Len=224
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV22 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV52 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV17 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV71 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV0 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV09 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV50 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV33 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV75 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV5 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV25 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV83 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV50 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV82 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV1 --------------------------------------------------
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV38 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV29 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV64 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV94 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV31 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV92 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV77 MFLGLFQYMIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV85 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV98 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV38 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV57 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV22 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV08 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV09 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV37 MFLGLFPYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV42 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV22 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV28 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV22 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV43 MFLGLFPYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_mutant2_ORF3_AST13228_1_2015_09_China_Unknown_PEDV7 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV48 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV01 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV08 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV34 MFLGLFQYTIDTVVKDVSKSANLSLYAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV49 ----------------------LSLDAVQELELNVVPIRQASNVTGFLFT
85_7_mutant4_ORF3_AST13240_1_2015_09_China_Unknown_PEDV3 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV1 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV61 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV32 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV46 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV55 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_mutant4_ORF3_AST13240_1_2015_09_China_Unknown_PEDV9 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV36 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV21 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV56 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV58 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIIQASNVTGFLFT
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV4 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV05 MFLGLFQYTIDTVVKDVSKSVNLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV80 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV81 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV5 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV70 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV67 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV11 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV16 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV90 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV54 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV38 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV73 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV17 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV66 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFFFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV56 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV84 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV --------------------------------------------------
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV79 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV23 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV16 MFLGLFQYTIDTVVKDVSRSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV7 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV14 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV62 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV85 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV29 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV36 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV67 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV44 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV1 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV73 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV91 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV42 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV3 MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV66 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV1 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV85 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV97 MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV22 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV52 SVFIYFFALFKASSLRRNCIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV17 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV71 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV0 SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV09 SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV50 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV33 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV75 SVFIYFFALFKASSLRRNYIMLAARFAVIVFYCPLLYYCGAFLDATIICC
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV5 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV25 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV83 SVFIYFFALFKASSLRRNYVMLAARFAVIFIYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV50 SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV82 SVFIYFFALFRASSLRRNYIMLAARFAVIFLSVAHL--------------
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV1 --------------------MLAARFAVVFLYCPLLYYCGALLDATIICC
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV38 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV29 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV64 SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV94 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV31 SVFIYFFALFKASSLRRNYIMLAARFAVIFLYCPILYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV92 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV77 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV85 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV98 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV38 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV57 SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV22 SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV08 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV09 SVFIYFFALFKASSLRRNYIMLAARFAVIFLSVAHL--------------
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV37 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV42 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV22 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV28 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV22 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV43 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_mutant2_ORF3_AST13228_1_2015_09_China_Unknown_PEDV7 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV48 SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV01 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATITCC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV08 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV34 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV49 SVFVYFFALFKASSLRRNYIMLAARFAVVFLYCPLLYYCGALLDATIICC
85_7_mutant4_ORF3_AST13240_1_2015_09_China_Unknown_PEDV3 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV1 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV61 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV32 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV46 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV55 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC
85_7_mutant4_ORF3_AST13240_1_2015_09_China_Unknown_PEDV9 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV36 SVFIYFFALFKASSLRRNYIMLAARFAVIFLSVAHL--------------
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV21 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV56 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV58 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIIFC
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV4 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV05 SVFVYFFALFKASSLRRNYIMLAARFAVVFLYCPLLYYCGALLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV80 SVFIYFFALFKASSLRRNYIMLAARFAVIVFYCPLLYYCGAFLDATIICC
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV81 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV5 SVFIYFFALFKASSLRRNYIMLAARFAVIFIYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV70 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV67 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV11 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV16 SVFIYFFALFKASSLRRNYIMLAARFAVIFLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV90 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV54 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV38 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV73 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV17 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV66 SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV56 SVFIYFFALFKASSLRRNCIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV84 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV --------------------MLAARFAVVFLYCPLLYYCGALLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV79 SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV23 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV16 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV7 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV14 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV62 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV85 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV29 SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV36 SVFIYFFALFKASSLRRNYTMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV67 SVFIYFFALFKASSLRRNYIMLAARFAVIFLSVAHL--------------
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV44 SVFIYFFALFKASSLTRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV1 SVFIYFFALFKASSLRRNYVMLAARFAVILLYCPLLYYCGAFLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV73 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV91 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV42 SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV3 SVFIYFFALFKASSLRRNYVMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV66 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV1 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV85 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV97 SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC
********:.: . *
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV22 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV52 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV17 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV71 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV0 TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV09 TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV50 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV33 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV75 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV5 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV25 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV83 TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV50 TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV82 --------------------------------------------------
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV1 ALIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYY-GKSIVILEGG
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV38 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV29 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV64 TLIGRLFLVCFYSWRYKNALFIILNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV94 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV31 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV92 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV77 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV85 TLIGRLCLVCFYSWRYKNALFVIFNTTTLSFLNGKADYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV98 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV38 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV57 TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAFMTANPL------
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV22 TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV08 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV09 --------------------------------------------------
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV37 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV42 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV22 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV28 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV22 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV43 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_mutant2_ORF3_AST13228_1_2015_09_China_Unknown_PEDV7 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV48 TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV01 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV08 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV34 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV49 ALIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYD-GKSIVILEGG
85_7_mutant4_ORF3_AST13240_1_2015_09_China_Unknown_PEDV3 TLIGRLCLVCSYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV1 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAA-------------
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV61 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV32 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV46 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV55 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_mutant4_ORF3_AST13240_1_2015_09_China_Unknown_PEDV9 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV36 --------------------------------------------------
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV21 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV56 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV58 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV4 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV05 ALIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV80 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV81 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV5 TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV70 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV67 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV11 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV16 TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV90 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV54 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV38 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV73 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV17 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV66 TLIGRLFLVCFYSWRYKNALFIILNTTTLSFLNGKAAYYDGKSIVVLEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV56 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV84 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKADYYDGKSIVILEGG
85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV ALIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYY-GKSVVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV79 TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV23 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV16 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV7 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV14 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV62 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV85 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV29 TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV36 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV67 --------------------------------------------------
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV44 ILIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV1 TLIGRLFLVCFYSWRYKNALFIILNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV73 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV91 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV42 TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV3 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV66 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV1 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKADYYDGKSIVILEGG
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV85 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV97 TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKPIVILEGG
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV22 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV52 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV17 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV71 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV0 DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV09 DHYITFGNSFVAFVSSINLYLAIRGRQAADLHLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV50 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV33 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV75 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV5 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV25 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV83 DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV50 DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV82 ---------LAGFV------------------------------------
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV1 DHYITFGNSFVAFVSNIDLYLAIRGRQEADLHLLRTVELLDGKKLCVFSQ
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV38 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV29 DHYITFGNSFVAFVSNIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV64 DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV94 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV31 DHYITFGNSFVAFVSSIDLYLAVRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV92 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV77 DHYITFGNSFVAFVSSINLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV85 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV98 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV38 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV57 --------------------------------------------------
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV22 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV08 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV09 ---------LAGFV------------------------------------
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV37 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV42 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV22 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV28 DHYITFGNSFVAFVSNIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV22 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV43 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_mutant2_ORF3_AST13228_1_2015_09_China_Unknown_PEDV7 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV48 DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV01 DHYITFGNSFVAFVSSIDLCLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV08 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV34 DHYITFGNSFVAF-SSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV49 DHYITFGNSFVAFVSNIDLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
85_7_mutant4_ORF3_AST13240_1_2015_09_China_Unknown_PEDV3 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV1 --------------------------------------------------
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV61 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV32 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV46 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV55 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_mutant4_ORF3_AST13240_1_2015_09_China_Unknown_PEDV9 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV36 ---------LAGFV------------------------------------
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV21 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV56 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV58 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV4 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV05 DHYITFGNSFVAFVSNIDLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV80 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV81 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV5 DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV70 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV67 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV11 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV16 DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV90 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV54 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV38 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV73 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV17 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV66 DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV56 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV84 DHYITFGNSFVAFVSSI------RGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV DHYITFGNSFVAFVSNIDLYLAIRGRQEADLHLLRTVELLDGKKLCVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV79 DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV23 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV16 DHYITFGNSLVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV7 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV14 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV62 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV85 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV29 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV36 DHYITFGNSFVAFVSSIDLYLAVRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV67 ---------LAGFV------------------------------------
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV44 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV1 DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV73 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV91 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV42 DHYITFGNSFVAFVSSINLHLAIRGRQEADLHLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV3 DHYITFGNSFVAFVSSINLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV66 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV1 DHYITFGNSFVAFVSSIYV-----GGKKPTYSCCELLSFLMARSFMSFRN
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV85 DHYITFGNSLVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV97 DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV22 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV52 HQIVGITNAVFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV17 HQIVGITNAAFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV71 HQIVGITNAAFDSIQLDEYATISE
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV0 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV09 HHIVGITNAAFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV50 HQIVGITNAAFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV33 HQIVGITNAAFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV75 HQIVGITNAAFDSIQLDEYATISE
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV5 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV25 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV83 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV50 HHIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV82 ------------------------
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV1 HQIVGITNAAFDSIQLDEYATISE
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV38 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV29 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV64 HHIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV94 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV31 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV92 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV77 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV85 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV98 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV38 HQIVGITNAAFDSIQLDEYATISE
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV57 ------------------------
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV22 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV08 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV09 ------------------------
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV37 HQIVGITNAAFDSIQLDEYATISE
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV42 HQIVGITNAAFDSIQLDEYATISE
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV22 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV28 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV22 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV43 HQIVGITNAAFDSIQLDEYATISE
85_7_mutant2_ORF3_AST13228_1_2015_09_China_Unknown_PEDV7 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV48 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV01 HQIVGITNAAFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV08 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV34 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV49 HQIVGITNAAFDSIQLDEYATISE
85_7_mutant4_ORF3_AST13240_1_2015_09_China_Unknown_PEDV3 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV1 ------------------------
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV61 HQIVGITNAAFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV32 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV46 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV55 HQIVGITNAAFDSIQLDEYATISE
85_7_mutant4_ORF3_AST13240_1_2015_09_China_Unknown_PEDV9 HQIVGITNAAFDSIQLDEYATISE
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV36 ------------------------
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV21 HQIVGITNAAFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV56 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV58 HQIVGITNAAFDSIQLDEYATISE
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV4 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV05 HQIVGITNAAFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV80 HQIVGITNAAFDSIQLDEYATISE
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV81 HQIVGITNAAFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV5 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV70 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV67 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV11 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV16 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV90 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV54 HQIVGITNAAFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV38 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV73 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV17 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV66 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV56 HQIVGITNAVFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV84 HQIVGITNAAFDSIQLDEYATISE
85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV79 HHIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV23 HQIVGITNAAFDSIQLDEYATISE
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV16 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3c_NA_QNL15262_1_2017_01_China_Swine_PEDV7 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV14 HQIVGITNAAFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV62 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV85 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV29 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV36 HQIVGITNAAFDSIQLDEYATISE
85_7_CH_FJZZ_9_2012_NA_AGK89915_1_2012_08_20_China_Swine_PEDV_ORF3_AST13137_1_2015_09_China_Unknown_PEDV67 ------------------------
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV44 HQIVGITNAAFDSIQLDEYATISE
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV1 HQIVGITNAAFDSIQLDEYATISE
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV73 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV91 HQIVGITNAAFDSIQLDEYATISE
13_019349_NA_AGS12450_1_2013_05_29_USA_Swine_PEDV42 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV3 HQIVGITNAAFDSIQLDEYATISE
85_7_ORF3_AST13216_1_2013_05_China_Swine_PEDV66 HQIVGITNAAFDSIQLDEYATISE
85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV1 IKLLALL-----MLHLTQFN----
85_7_A40_ORF3_AST13131_1_2015_09_China_Unknown_PEDV85 HQIVGITNAAFDSIQLDEYATISE
17GXCZ_1ORF3d_NA_QNL15256_1_2017_01_China_Swine_PEDV97 HQIVGITNAAFDSIQLDEYATISE
>PEDV_USA_Missouri130_2015_ORF3_ANI85783_1_2015_10_26_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCACAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >KNU_1815_ORF3_QBO24652_1_2018_03_South_Korea_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTGTATCATGTTGGCAGCGCGTTTTGCCGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTGCAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGTATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Iowa161_2014_NA_AKJ21978_1_2014_02_17_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Minnesota52_2013_NA_AID57082_1_2013_06_26_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >CH_SCAZ10_2017_ORF3_AZL47211_1_2017_11_27_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTCGGACGCTGTCCAAGAGTTGGAGCTTAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCTTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCACTTTTATATTACTGTGGTGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCTTTAATACTACTACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGATCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATCAACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGATTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >FL2013_NA_AKO90056_1_2013_07_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTCGGATGCTGTCCAAGAGTTGGAGCTTAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCACTTTTATATTACTGTGGTGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCTTTAATACTACTACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATTAACTTGTATCTAGCTATACGTGGGCGGCAAGCAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCATATTGTTGGCATTACTAATGCTGCATTTGATTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Minnesota212_2014_NA_AKJ21906_1_2014_02_13_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Kansas29_2013_NA_AID56680_1_2013_07_15_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Minnesota62_2013_NA_AID56806_1_2013_11_18_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTTTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >CH_SCZG_2017_ORF3_AZL47199_1_2017_01_05_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCCAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTATTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_1842_2016_ITA_ORF3_AQY61720_1_2016_01_28_Italy_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCAATTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >HM2017_NA_QER78628_1_2016_03_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTCGGACGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCTTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTCGCTGTCATCTTTATTTATTGCCCACTTTTATATTACTGTGGCGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGTTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCTTTAATACTACTACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGATCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATTAACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >GDS40_ORF3_QCQ19967_1_2011_02_10_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTCGGATGCTGTCCAAGAGTTGGAGCTTAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCACTTTTATATTACTGTGGTGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCTTTAATACTACTACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATTAACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCATATTGTTGGCATTACTAATGCTGCATTTGATTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >HLJBY_NA_AKJ85724_1_NA_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCGAAGTCTGCCAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAGAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTTTTCTTTCTGTTGCACACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGCAGGCTTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >85_7_mutant5_ORF3_AST13246_1_2015_09_China_Unknown_PEDV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTGGCAGCGCGTTTTGCTGTCGTCTTTCTCTATTGCCCACTTTTATATTACTGTGGTGCACTTTTAGATGCAACTATTATTTGTTGCGCACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTTTTTATTATCTTTAATACTACGACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTAC---GGCAAATCCATTGTGATTCTAGAAGGTGGCGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAACATTGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTGTGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >S97_NA_QCO95405_1_2018_04_18_South_Korea_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCTAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTATTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAGATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >KNU_1305_ORF3_AID66721_1_2013_12_South_Korea_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAACATTGACTTGTATCTAGCTATCCGCGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >GD_A_ORF3_AFP81690_1_2012_02_11_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTCGGATGCTGTCCAAGAGTTGGAGCTTAATGTAGTTCCAATTAGGCAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCACTTTTATATTACTGTGGTGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCCTTAATACTACTACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATTAACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCATATTGTTGGCATTACTAATGCTGCATTTGATTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >IBR_4_JPN_2014_ORF3_BAT33306_1_2014_04_Japan_Pig_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_2098_1_Malaga_Casares_ORF3_QKV43818_1_2018_01_11_Spain_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATCAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCAATTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTGTACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >OH9097_14_ORF3_ALM31945_1_2014_10_19_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >N7_GD2017_NA_QFG01707_1_2017_11_13_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACATGATTGACACAGTTGTCAAAGATGTCTCGAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTACATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTACTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTTATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAGCATTAACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCCGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >HUA_14PED96_NA_ALR74758_1_2014_10_15_Viet_Nam_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTGTTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGATTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTACCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >IBR_7_JPN_2014_ORF3_BAT33246_1_2014_05_Japan_Pig_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_AUSTRIA_L01063_M10_15_02_2015_mp_SNQ27998_1_NA_NA_Unknown_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCAATTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >YN60_NA_ALM09376_1_2014_02_05_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTCGGATGCTGTCCAAGAGTTGGAGCTTAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCACTTTTATATTACTGTGGTGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCTTTAATACTACTACACTTTCTTTTCTCAATGGTAAAGCAGCTTTTATGACGGCAAATCCATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >PEDV_15F_ORF3_AJP67427_1_2012_03_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAGCATTGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCCGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >IWT_4_JPN_2014_ORF3_BAT33132_1_2014_04_Japan_Pig_PEDV ATGTTTCTTGGACTTTTTCAATATACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >JS2008_NA_AGG55746_1_2008_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCGAAGTCTGCCAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTTTTCTTTCTGTTGCACACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGCAGGCTTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >PEDV_8C_ORF3_AJP67409_1_NA_China_Swine_PEDV ATGTTTCTTGGACTTTTTCCATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAGCATTGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCCGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >Ukraine_Poltava01_2014_NA_ALJ52505_1_2014_11_22_Ukraine_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAACACTACGACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Ohio69_2013_NA_AID56848_1_2013_11_24_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >KNU_1406_1_ORF3_AIR95866_1_2014_03_South_Korea_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAACATTGACTTGTATCTAGCTATCCGCGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >KGS_1_JPN_2013_ORF3_BAT33138_1_2013_12_Japan_Pig_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_CHZ_ORF3_AJP67433_1_2013_03_China_Swine_PEDV ATGTTTCTTGGACTTTTTCCATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >COL_Antioquia09796_2015_NA_QGQ60313_1_2015_07_30_Colombia_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >GDS38_ORF3_QCQ20009_1_2012_10_20_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTCGGATGCTGTCCAAGAGTTGGAGCTTAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCACTTTTATATTACTGTGGTGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCTTTAATACTACTACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATTAACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PC22A_P120_NA_APX42132_1_2015_10_01_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTACTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTGTCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Illinois98_2013_NA_AID56998_1_2013_12_11_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >KNU_141112_S_DEL5_ORF3_ASA40104_1_2016_01_South_Korea_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGTATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTT---AGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_GER_L00901_V215_1978_mp_SNC44846_1_NA_NA_Unknown_PEDV ------------------------------------------------------------------TTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTGTTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCGTCTTTCTCTATTGCCCACTTTTATATTACTGTGGTGCACTTTTAGATGCAACTATTATTTGTTGCGCACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTTTTTATTATCTTTAATACTACGACACTTTCTTTTCTCAATGGTAAAGCAGCTTATGAC---GGCAAATCCATTGTGATTCTAGAAGGTGGCGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAACATTGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >COL_Cundinamarca03267_2014_NA_QGQ60229_1_2014_03_07_Colombia_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTCTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >Aram_P5_ORF3_QDY92476_1_2014_South_Korea_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >PEDV_GER_L00933_K22_14_05_2014_mp_SNQ28065_1_NA_NA_Unknown_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCAATTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Kansas36_2013_NA_AID56716_1_2013_09_01_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >KNU_1801_ORF3_QNC49747_1_2018_02_South_Korea_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCTAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTATTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAGATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_GER_L00926_K20_4_01_2014_mp_SNQ27894_1_NA_NA_Unknown_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCAATTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >COL_ValledelCauca05761_2015_NA_QGQ60265_1_2015_05_08_Colombia_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >SC1402_NA_AJW67219_1_2014_03_15_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCGAAGTCTGCCAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTTTTCTTTCTGTTGCACACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGCAGGCTTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >PEDV_USA_Minnesota188_2014_NA_AIK28709_1_2014_01_22_USA_Unknown_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Minnesota271_2014_NA_AKJ22026_1_2014_02_20_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >KNU_1909_NA_QOC68775_1_2019_03_South_Korea_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTATTCAAGCTTCTAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTATTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTTTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAGATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >CH_GX_2015_750A_NA_ARQ03270_1_2015_02_14_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCCTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGATCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >CV777_NA_SNX30665_1_NA_China_Unknown_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCGAAGTCTGTCAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTGTTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCGTCTTTCTCTATTGCCCACTTTTATATTACTGTGGTGCACTTTTAGATGCAACTATTATTTGTTGCGCACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTTTTTATTATCTTTAATACTACGACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGCGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAACATTGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Minnesota73_2013_NA_AID56866_1_2013_11_25_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTTTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Colorado420_2014_NA_AKJ22020_1_2014_09_30_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >CH_JLDH_2016_NA_ASO67378_1_2016_07_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTCGGACGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCTTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATCTTTATTTATTGCCCACTTTTATATTACTGTGGCGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCTTTAATACTACTACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGATCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATTAACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >MEX_104_2013_NA_AID57106_1_2013_11_03_Mexico_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_GER_L01015_K01_15_05_2015_mp_SNQ28058_1_NA_NA_Unknown_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCAATTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >FR_001_2014_ORF3_AKE47379_1_2014_12_01_France_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCAATTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >GDS06_ORF3_QCQ19931_1_2011_02_10_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCACTTTTATATTACTGTGGTGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCTTTAATACTACGACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATTAACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGATTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >IA2_ORF3_AGY31035_1_2013_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >KNU_1817_ORF3_QBO24664_1_2018_04_South_Korea_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCCATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_MO_2014_03293_ORF3_AKP80632_1_2014_01_20_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_GER_L01060_K07_15_02_2015_mp_SNQ27913_1_NA_NA_Unknown_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCAATTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >GDS07_ORF3_QCQ19847_1_2014_03_12_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGACGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCTTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAGCATTGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCCGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >LW_L_NA_QBM00062_1_2010_02_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTCGGATGCTGTCCAAGAGTTGGAGCTTAATGTAGTTCCAATTAGGCAAGCTTCAAATGTGACTGGTTTTTTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCACTTTTATATTACTGTGGTGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCCTTAATACTACTACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGGTTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATTAACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGATTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >KNU_1830_ORF3_QDZ36669_1_2018_11_South_Korea_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTGTATCATGTTGGCAGCGCGTTTTGCCGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTGCAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGTATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >NW17_ORF3_ATY72307_1_2015_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGATTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAGCATT------------------CGTGGGCGGCAAGAAGCCGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTGGCAGCGCGTTTTGCTGTCGTCTTTCTCTATTGCCCACTTTTATATTACTGTGGTGCACTTTTAGATGCAACTATTATTTGTTGCGCACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTTTTTATTATCTTTAATACTACGACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTAC---GGCAAATCCGTTGTGATTCTAGAAGGTGGCGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAACATTGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTGTGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_JS_A_ORF3_AZS18879_1_2017_11_10_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTCGGATGCTGTCCAAGAGTTGGAGCTTAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCACTTTTATATTACTGTGGTGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCTTTAATACTACTACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATTAACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCATATTGTTGGCATTACTAATGCTGCATTTGATTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >GDS13_ORF3_QCQ19865_1_2012_06_15_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATTGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCCGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_USA_Minnesota125_2015_ORF3_ANI85813_1_2015_10_20_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAGGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTTTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTCTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >BJ_2011_C_NA_APD70935_1_2011_11_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_1456_Zaragoza_Egea_de_los_Caballeros_ORF3_QKV43734_1_2014_04_29_Spain_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Minnesota309_2014_NA_AKJ22122_1_2014_04_17_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_MEX_GTO_02_2016_NA_AVU05341_1_2016_07_19_Mexico_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >GDS19_ORF3_QCQ19877_1_2012_06_04_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCTAACTTGTCTTCGGACGCTGTCCAAGAGTTGGAGCTTAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATCTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAGCATTGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCCGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >GDS26_ORF3_QCQ19829_1_2012_09_17_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATACTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAGCATCGACTTGTATCTAGCTGTACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >attenuated_DR13_NA_AFE85970_1_NA_South_Korea_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCGAAGTCTGCCAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTTTTCTTTCTGTTGCACACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGCAGGCTTTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >GDS33_ORF3_QCQ19901_1_2014_07_28_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGACGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCATACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCTATTCAACTAGACGAGTATGCTACAATTAGTGAA >CH_GDGZ_2012_ORF3_AGR51643_1_2012_03_China_Unknown_PEDV ATGTTTCTCGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTCGGATGCTGTCCAAGAGTTGGAGCTTAATGTAGTTCCAATTAGGCAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCCTTCTTTATTGCCCACTTTTATATTACTGTGGTGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCCTTAATACTACTACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATTAACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >USA_Minnesota59_2013_NA_AID56794_1_2013_11_11_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_MEX_JAL_04_2017_NA_AVU05390_1_2017_02_20_Mexico_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >GDS32_ORF3_QCQ19997_1_2013_02_06_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATAGACACAGTCGTCAAAGATGTCTCTAAGTCTGCCAACTTGTCTTCGGATGCTGTCCAAGAGTTGGAGCTTAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACTGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCTTTCTTTATTGCCCACTTTTATATTACTGTGGTGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTTTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCTTTAATACTACTACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATTAACTTGCATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACATCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >CHSD2014_ORF3_AQX36343_1_2014_05_12_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTCGTCAAAGATGTCTCAAAGTCTGCCAACTTGTCTTCGGATGCTGTCCAAGAGTTGGAGCTTAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATTTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATGTTATGTTGGCAGCGCGTTTTGCTGTCATCGTTCTTTATTGCCCACTTTTATATTACTGTGGTGCATTTTTAGATGCAACTATTATCTGTTGCACACTTATTGGCAGGCTCTGTTTAGTCTGCTTTTATTCCTGGCGCTATAAAAATGCGCTCTTTATTATCTTTAATACTACGACACTTTCTTTTCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTCGTTGCTTTCGTTAGTAGCATTAACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTAGGCATTACTAATGCTGCATTTGATTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >Tottori2_JPN_2014_NA_BAR92899_1_2014_10_Japan_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >CH_SXYL_2016_NA_ASY04644_1_2016_09_10_China_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGATTATTATGACGGCAAATCCATTGTGATTCTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTCGTTAGTAGCATTTACGTG---------------GGCGGCAAGAAGCCGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTA---------------ATGCTGCATTTGACTCAATTCAAC------------ >USA_Minnesota78_2013_NA_AID56896_1_2013_11_28_USA_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAATCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTCTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA >PEDV_MEX_MICH_02_2015_NA_AVU05446_1_2015_03_20_Mexico_Swine_PEDV ATGTTTCTTGGACTTTTTCAATACACGATTGACACAGTTGTCAAAGATGTCTCAAAGTCTGCTAACTTGTCTTTGGATGCTGTCCAAGAGTTGGAGCTCAATGTAGTTCCAATTAGACAAGCTTCAAATGTGACGGGTTTTCTTTTCACCAGTGTTTTTATCTACTTCTTTGCACTGTTTAAAGCGTCTTCTTTGAGGCGCAATTATATTATGTTGGCAGCGCGTTTTGCTGTCATTGTTCTTTATTGCCCACTTTTATATTATTGTGGTGCATTTTTAGATGCAACTATTATTTGTTGCACACTTATTGGCAGGCTTTGTTTAGTCTGCTTTTACTCCTGGCGCTATAAAAATGCGCTCTTTATTATTTTTAATACTACGACACTTTCTTTCCTCAATGGTAAAGCAGCTTATTATGACGGCAAACCCATTGTGATTTTAGAAGGTGGTGACCATTACATCACTTTTGGCAACTCTTTTGTTGCTTTTGTTAGTAGCATCGACTTGTATCTAGCTATACGTGGGCGGCAAGAAGCTGACCTACAGCTGTTGCGAACTGTTGAGCTTCTTGATGGCAAGAAGCTTTATGTCTTTTCGCAACATCAAATTGTTGGCATTACTAATGCTGCATTTGACTCAATTCAACTAGACGAGTATGCTACAATTAGTGAA
>PEDV_USA_Missouri130_2015_ORF3_ANI85783_1_2015_10_26_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >KNU_1815_ORF3_QBO24652_1_2018_03_South_Korea_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNCIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAVFDSIQLDEYATISE >USA_Iowa161_2014_NA_AKJ21978_1_2014_02_17_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >USA_Minnesota52_2013_NA_AID57082_1_2013_06_26_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >CH_SCAZ10_2017_ORF3_AZL47211_1_2017_11_27_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >FL2013_NA_AKO90056_1_2013_07_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLYLAIRGRQAADLHLLRTVELLDGKKLYVFSQ HHIVGITNAAFDSIQLDEYATISE >USA_Minnesota212_2014_NA_AKJ21906_1_2014_02_13_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >USA_Kansas29_2013_NA_AID56680_1_2013_07_15_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >USA_Minnesota62_2013_NA_AID56806_1_2013_11_18_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVFYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >CH_SCZG_2017_ORF3_AZL47199_1_2017_01_05_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_1842_2016_ITA_ORF3_AQY61720_1_2016_01_28_Italy_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >HM2017_NA_QER78628_1_2016_03_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVIFIYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >GDS40_ORF3_QCQ19967_1_2011_02_10_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HHIVGITNAAFDSIQLDEYATISE >HLJBY_NA_AKJ85724_1_NA_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFRASSLRRNYIMLAARFAVIFLSVAHL-------------- -------------------------------------------------- ---------LAGFV------------------------------------ ------------------------ >85_7_mutant5_ORF3_AST13246_1_2015_09_China_Unknown_PEDV -------------------------------------------------- --------------------MLAARFAVVFLYCPLLYYCGALLDATIICC ALIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYY-GKSIVILEGG DHYITFGNSFVAFVSNIDLYLAIRGRQEADLHLLRTVELLDGKKLCVFSQ HQIVGITNAAFDSIQLDEYATISE >S97_NA_QCO95405_1_2018_04_18_South_Korea_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >KNU_1305_ORF3_AID66721_1_2013_12_South_Korea_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSNIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >GD_A_ORF3_AFP81690_1_2012_02_11_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIILNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HHIVGITNAAFDSIQLDEYATISE >IBR_4_JPN_2014_ORF3_BAT33306_1_2014_04_Japan_Pig_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_2098_1_Malaga_Casares_ORF3_QKV43818_1_2018_01_11_Spain_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIFLYCPILYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAVRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >OH9097_14_ORF3_ALM31945_1_2014_10_19_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >N7_GD2017_NA_QFG01707_1_2017_11_13_China_Swine_PEDV MFLGLFQYMIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >HUA_14PED96_NA_ALR74758_1_2014_10_15_Viet_Nam_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFVIFNTTTLSFLNGKADYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >IBR_7_JPN_2014_ORF3_BAT33246_1_2014_05_Japan_Pig_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_AUSTRIA_L01063_M10_15_02_2015_mp_SNQ27998_1_NA_NA_Unknown_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >YN60_NA_ALM09376_1_2014_02_05_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAFMTANPL------ -------------------------------------------------- ------------------------ >PEDV_15F_ORF3_AJP67427_1_2012_03_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >IWT_4_JPN_2014_ORF3_BAT33132_1_2014_04_Japan_Pig_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >JS2008_NA_AGG55746_1_2008_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIFLSVAHL-------------- -------------------------------------------------- ---------LAGFV------------------------------------ ------------------------ >PEDV_8C_ORF3_AJP67409_1_NA_China_Swine_PEDV MFLGLFPYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >Ukraine_Poltava01_2014_NA_ALJ52505_1_2014_11_22_Ukraine_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >USA_Ohio69_2013_NA_AID56848_1_2013_11_24_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >KNU_1406_1_ORF3_AIR95866_1_2014_03_South_Korea_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSNIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >KGS_1_JPN_2013_ORF3_BAT33138_1_2013_12_Japan_Pig_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_CHZ_ORF3_AJP67433_1_2013_03_China_Swine_PEDV MFLGLFPYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >COL_Antioquia09796_2015_NA_QGQ60313_1_2015_07_30_Colombia_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >GDS38_ORF3_QCQ20009_1_2012_10_20_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PC22A_P120_NA_APX42132_1_2015_10_01_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATITCC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLCLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >USA_Illinois98_2013_NA_AID56998_1_2013_12_11_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >KNU_141112_S_DEL5_ORF3_ASA40104_1_2016_01_South_Korea_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLYAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAF-SSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_GER_L00901_V215_1978_mp_SNC44846_1_NA_NA_Unknown_PEDV ----------------------LSLDAVQELELNVVPIRQASNVTGFLFT SVFVYFFALFKASSLRRNYIMLAARFAVVFLYCPLLYYCGALLDATIICC ALIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYD-GKSIVILEGG DHYITFGNSFVAFVSNIDLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >COL_Cundinamarca03267_2014_NA_QGQ60229_1_2014_03_07_Colombia_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCSYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >Aram_P5_ORF3_QDY92476_1_2014_South_Korea_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAA------------- -------------------------------------------------- ------------------------ >PEDV_GER_L00933_K22_14_05_2014_mp_SNQ28065_1_NA_NA_Unknown_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >USA_Kansas36_2013_NA_AID56716_1_2013_09_01_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >KNU_1801_ORF3_QNC49747_1_2018_02_South_Korea_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_GER_L00926_K20_4_01_2014_mp_SNQ27894_1_NA_NA_Unknown_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >COL_ValledelCauca05761_2015_NA_QGQ60265_1_2015_05_08_Colombia_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >SC1402_NA_AJW67219_1_2014_03_15_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIFLSVAHL-------------- -------------------------------------------------- ---------LAGFV------------------------------------ ------------------------ >PEDV_USA_Minnesota188_2014_NA_AIK28709_1_2014_01_22_USA_Unknown_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >USA_Minnesota271_2014_NA_AKJ22026_1_2014_02_20_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >KNU_1909_NA_QOC68775_1_2019_03_South_Korea_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIIQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIIFC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >CH_GX_2015_750A_NA_ARQ03270_1_2015_02_14_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >CV777_NA_SNX30665_1_NA_China_Unknown_PEDV MFLGLFQYTIDTVVKDVSKSVNLSLDAVQELELNVVPIRQASNVTGFLFT SVFVYFFALFKASSLRRNYIMLAARFAVVFLYCPLLYYCGALLDATIICC ALIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSNIDLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >USA_Minnesota73_2013_NA_AID56866_1_2013_11_25_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVFYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >USA_Colorado420_2014_NA_AKJ22020_1_2014_09_30_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >CH_JLDH_2016_NA_ASO67378_1_2016_07_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIFIYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >MEX_104_2013_NA_AID57106_1_2013_11_03_Mexico_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_GER_L01015_K01_15_05_2015_mp_SNQ28058_1_NA_NA_Unknown_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >FR_001_2014_ORF3_AKE47379_1_2014_12_01_France_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >GDS06_ORF3_QCQ19931_1_2011_02_10_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIFLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >IA2_ORF3_AGY31035_1_2013_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >KNU_1817_ORF3_QBO24664_1_2018_04_South_Korea_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >USA_MO_2014_03293_ORF3_AKP80632_1_2014_01_20_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_GER_L01060_K07_15_02_2015_mp_SNQ27913_1_NA_NA_Unknown_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPILYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >GDS07_ORF3_QCQ19847_1_2014_03_12_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >LW_L_NA_QBM00062_1_2010_02_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFFFT SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIILNTTTLSFLNGKAAYYDGKSIVVLEGG DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >KNU_1830_ORF3_QDZ36669_1_2018_11_South_Korea_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNCIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAVFDSIQLDEYATISE >NW17_ORF3_ATY72307_1_2015_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKADYYDGKSIVILEGG DHYITFGNSFVAFVSSI------RGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV -------------------------------------------------- --------------------MLAARFAVVFLYCPLLYYCGALLDATIICC ALIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYY-GKSVVILEGG DHYITFGNSFVAFVSNIDLYLAIRGRQEADLHLLRTVELLDGKKLCVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_JS_A_ORF3_AZS18879_1_2017_11_10_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HHIVGITNAAFDSIQLDEYATISE >GDS13_ORF3_QCQ19865_1_2012_06_15_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_USA_Minnesota125_2015_ORF3_ANI85813_1_2015_10_20_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSRSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSLVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >BJ_2011_C_NA_APD70935_1_2011_11_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_1456_Zaragoza_Egea_de_los_Caballeros_ORF3_QKV43734_1_2014_04_29_Spain_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >USA_Minnesota309_2014_NA_AKJ22122_1_2014_04_17_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_MEX_GTO_02_2016_NA_AVU05341_1_2016_07_19_Mexico_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >GDS19_ORF3_QCQ19877_1_2012_06_04_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >GDS26_ORF3_QCQ19829_1_2012_09_17_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYTMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAVRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >attenuated_DR13_NA_AFE85970_1_NA_South_Korea_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIFLSVAHL-------------- -------------------------------------------------- ---------LAGFV------------------------------------ ------------------------ >GDS33_ORF3_QCQ19901_1_2014_07_28_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLTRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC ILIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >CH_GDGZ_2012_ORF3_AGR51643_1_2012_03_China_Unknown_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVILLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIILNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLYLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >USA_Minnesota59_2013_NA_AID56794_1_2013_11_11_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_MEX_JAL_04_2017_NA_AVU05390_1_2017_02_20_Mexico_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >GDS32_ORF3_QCQ19997_1_2013_02_06_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVIFLYCPLLYYCGAFLDATIICC TLIGRLFLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLHLAIRGRQEADLHLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >CHSD2014_ORF3_AQX36343_1_2014_05_12_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSSDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYVMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSINLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >Tottori2_JPN_2014_NA_BAR92899_1_2014_10_Japan_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >CH_SXYL_2016_NA_ASY04644_1_2016_09_10_China_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKADYYDGKSIVILEGG DHYITFGNSFVAFVSSIYV-----GGKKPTYSCCELLSFLMARSFMSFRN IKLLALL-----MLHLTQFN---- >USA_Minnesota78_2013_NA_AID56896_1_2013_11_28_USA_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKSIVILEGG DHYITFGNSLVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE >PEDV_MEX_MICH_02_2015_NA_AVU05446_1_2015_03_20_Mexico_Swine_PEDV MFLGLFQYTIDTVVKDVSKSANLSLDAVQELELNVVPIRQASNVTGFLFT SVFIYFFALFKASSLRRNYIMLAARFAVIVLYCPLLYYCGAFLDATIICC TLIGRLCLVCFYSWRYKNALFIIFNTTTLSFLNGKAAYYDGKPIVILEGG DHYITFGNSFVAFVSSIDLYLAIRGRQEADLQLLRTVELLDGKKLYVFSQ HQIVGITNAAFDSIQLDEYATISE
Reading sequence file /data//pss_subsets/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/fasta/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1
Found 90 sequences of length 672
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 2.6%
Found 70 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 8
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 10 polymorphic sites
**p-Value(s)**
----------
NSS: 8.00e-02 (1000 permutations)
Max Chi^2: 1.33e-01 (1000 permutations)
PHI (Permutation): 2.95e-01 (1000 permutations)
PHI (Normal): 2.58e-01
#NEXUS
[ID: 0080012514]
begin taxa;
dimensions ntax=90;
taxlabels
PEDV_USA_Missouri130_2015_ORF3_ANI85783_1_2015_10_26_USA_Swine_PEDV
CH_SCZG_2017_ORF3_AZL47199_1_2017_01_05_China_Swine_PEDV
PEDV_1842_2016_ITA_ORF3_AQY61720_1_2016_01_28_Italy_Swine_PEDV
HM2017_NA_QER78628_1_2016_03_China_Swine_PEDV
GDS40_ORF3_QCQ19967_1_2011_02_10_China_Swine_PEDV
HLJBY_NA_AKJ85724_1_NA_China_Swine_PEDV
85_7_mutant5_ORF3_AST13246_1_2015_09_China_Unknown_PEDV
S97_NA_QCO95405_1_2018_04_18_South_Korea_Swine_PEDV
KNU_1305_ORF3_AID66721_1_2013_12_South_Korea_Swine_PEDV
GD_A_ORF3_AFP81690_1_2012_02_11_China_Swine_PEDV
IBR_4_JPN_2014_ORF3_BAT33306_1_2014_04_Japan_Pig_PEDV
KNU_1815_ORF3_QBO24652_1_2018_03_South_Korea_Swine_PEDV
PEDV_2098_1_Malaga_Casares_ORF3_QKV43818_1_2018_01_11_Spain_Swine_PEDV
OH9097_14_ORF3_ALM31945_1_2014_10_19_USA_Swine_PEDV
N7_GD2017_NA_QFG01707_1_2017_11_13_China_Swine_PEDV
HUA_14PED96_NA_ALR74758_1_2014_10_15_Viet_Nam_Swine_PEDV
IBR_7_JPN_2014_ORF3_BAT33246_1_2014_05_Japan_Pig_PEDV
PEDV_AUSTRIA_L01063_M10_15_02_2015_mp_SNQ27998_1_NA_NA_Unknown_PEDV
YN60_NA_ALM09376_1_2014_02_05_China_Swine_PEDV
PEDV_15F_ORF3_AJP67427_1_2012_03_China_Swine_PEDV
IWT_4_JPN_2014_ORF3_BAT33132_1_2014_04_Japan_Pig_PEDV
JS2008_NA_AGG55746_1_2008_China_Swine_PEDV
USA_Iowa161_2014_NA_AKJ21978_1_2014_02_17_USA_Swine_PEDV
PEDV_8C_ORF3_AJP67409_1_NA_China_Swine_PEDV
Ukraine_Poltava01_2014_NA_ALJ52505_1_2014_11_22_Ukraine_Swine_PEDV
USA_Ohio69_2013_NA_AID56848_1_2013_11_24_USA_Swine_PEDV
KNU_1406_1_ORF3_AIR95866_1_2014_03_South_Korea_Swine_PEDV
KGS_1_JPN_2013_ORF3_BAT33138_1_2013_12_Japan_Pig_PEDV
PEDV_CHZ_ORF3_AJP67433_1_2013_03_China_Swine_PEDV
COL_Antioquia09796_2015_NA_QGQ60313_1_2015_07_30_Colombia_Swine_PEDV
GDS38_ORF3_QCQ20009_1_2012_10_20_China_Swine_PEDV
PC22A_P120_NA_APX42132_1_2015_10_01_USA_Swine_PEDV
USA_Illinois98_2013_NA_AID56998_1_2013_12_11_USA_Swine_PEDV
USA_Minnesota52_2013_NA_AID57082_1_2013_06_26_USA_Swine_PEDV
KNU_141112_S_DEL5_ORF3_ASA40104_1_2016_01_South_Korea_Swine_PEDV
PEDV_GER_L00901_V215_1978_mp_SNC44846_1_NA_NA_Unknown_PEDV
COL_Cundinamarca03267_2014_NA_QGQ60229_1_2014_03_07_Colombia_Swine_PEDV
Aram_P5_ORF3_QDY92476_1_2014_South_Korea_Swine_PEDV
PEDV_GER_L00933_K22_14_05_2014_mp_SNQ28065_1_NA_NA_Unknown_PEDV
USA_Kansas36_2013_NA_AID56716_1_2013_09_01_USA_Swine_PEDV
KNU_1801_ORF3_QNC49747_1_2018_02_South_Korea_Swine_PEDV
PEDV_GER_L00926_K20_4_01_2014_mp_SNQ27894_1_NA_NA_Unknown_PEDV
COL_ValledelCauca05761_2015_NA_QGQ60265_1_2015_05_08_Colombia_Swine_PEDV
SC1402_NA_AJW67219_1_2014_03_15_China_Swine_PEDV
CH_SCAZ10_2017_ORF3_AZL47211_1_2017_11_27_China_Swine_PEDV
PEDV_USA_Minnesota188_2014_NA_AIK28709_1_2014_01_22_USA_Unknown_PEDV
USA_Minnesota271_2014_NA_AKJ22026_1_2014_02_20_USA_Swine_PEDV
KNU_1909_NA_QOC68775_1_2019_03_South_Korea_Swine_PEDV
CH_GX_2015_750A_NA_ARQ03270_1_2015_02_14_China_Swine_PEDV
CV777_NA_SNX30665_1_NA_China_Unknown_PEDV
USA_Minnesota73_2013_NA_AID56866_1_2013_11_25_USA_Swine_PEDV
USA_Colorado420_2014_NA_AKJ22020_1_2014_09_30_USA_Swine_PEDV
CH_JLDH_2016_NA_ASO67378_1_2016_07_China_Swine_PEDV
MEX_104_2013_NA_AID57106_1_2013_11_03_Mexico_Swine_PEDV
PEDV_GER_L01015_K01_15_05_2015_mp_SNQ28058_1_NA_NA_Unknown_PEDV
FL2013_NA_AKO90056_1_2013_07_China_Swine_PEDV
FR_001_2014_ORF3_AKE47379_1_2014_12_01_France_Swine_PEDV
GDS06_ORF3_QCQ19931_1_2011_02_10_China_Swine_PEDV
IA2_ORF3_AGY31035_1_2013_USA_Swine_PEDV
KNU_1817_ORF3_QBO24664_1_2018_04_South_Korea_Swine_PEDV
USA_MO_2014_03293_ORF3_AKP80632_1_2014_01_20_USA_Swine_PEDV
PEDV_GER_L01060_K07_15_02_2015_mp_SNQ27913_1_NA_NA_Unknown_PEDV
GDS07_ORF3_QCQ19847_1_2014_03_12_China_Swine_PEDV
LW_L_NA_QBM00062_1_2010_02_China_Swine_PEDV
KNU_1830_ORF3_QDZ36669_1_2018_11_South_Korea_Swine_PEDV
NW17_ORF3_ATY72307_1_2015_China_Swine_PEDV
USA_Minnesota212_2014_NA_AKJ21906_1_2014_02_13_USA_Swine_PEDV
85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV
PEDV_JS_A_ORF3_AZS18879_1_2017_11_10_China_Swine_PEDV
GDS13_ORF3_QCQ19865_1_2012_06_15_China_Swine_PEDV
PEDV_USA_Minnesota125_2015_ORF3_ANI85813_1_2015_10_20_USA_Swine_PEDV
BJ_2011_C_NA_APD70935_1_2011_11_China_Swine_PEDV
PEDV_1456_Zaragoza_Egea_de_los_Caballeros_ORF3_QKV43734_1_2014_04_29_Spain_Swine_PEDV
USA_Minnesota309_2014_NA_AKJ22122_1_2014_04_17_USA_Swine_PEDV
PEDV_MEX_GTO_02_2016_NA_AVU05341_1_2016_07_19_Mexico_Swine_PEDV
GDS19_ORF3_QCQ19877_1_2012_06_04_China_Swine_PEDV
GDS26_ORF3_QCQ19829_1_2012_09_17_China_Swine_PEDV
USA_Kansas29_2013_NA_AID56680_1_2013_07_15_USA_Swine_PEDV
attenuated_DR13_NA_AFE85970_1_NA_South_Korea_Swine_PEDV
GDS33_ORF3_QCQ19901_1_2014_07_28_China_Swine_PEDV
CH_GDGZ_2012_ORF3_AGR51643_1_2012_03_China_Unknown_PEDV
USA_Minnesota59_2013_NA_AID56794_1_2013_11_11_USA_Swine_PEDV
PEDV_MEX_JAL_04_2017_NA_AVU05390_1_2017_02_20_Mexico_Swine_PEDV
GDS32_ORF3_QCQ19997_1_2013_02_06_China_Swine_PEDV
CHSD2014_ORF3_AQX36343_1_2014_05_12_China_Swine_PEDV
Tottori2_JPN_2014_NA_BAR92899_1_2014_10_Japan_Swine_PEDV
CH_SXYL_2016_NA_ASY04644_1_2016_09_10_China_Swine_PEDV
USA_Minnesota78_2013_NA_AID56896_1_2013_11_28_USA_Swine_PEDV
USA_Minnesota62_2013_NA_AID56806_1_2013_11_18_USA_Swine_PEDV
PEDV_MEX_MICH_02_2015_NA_AVU05446_1_2015_03_20_Mexico_Swine_PEDV
;
end;
begin trees;
translate
1 PEDV_USA_Missouri130_2015_ORF3_ANI85783_1_2015_10_26_USA_Swine_PEDV,
2 CH_SCZG_2017_ORF3_AZL47199_1_2017_01_05_China_Swine_PEDV,
3 PEDV_1842_2016_ITA_ORF3_AQY61720_1_2016_01_28_Italy_Swine_PEDV,
4 HM2017_NA_QER78628_1_2016_03_China_Swine_PEDV,
5 GDS40_ORF3_QCQ19967_1_2011_02_10_China_Swine_PEDV,
6 HLJBY_NA_AKJ85724_1_NA_China_Swine_PEDV,
7 85_7_mutant5_ORF3_AST13246_1_2015_09_China_Unknown_PEDV,
8 S97_NA_QCO95405_1_2018_04_18_South_Korea_Swine_PEDV,
9 KNU_1305_ORF3_AID66721_1_2013_12_South_Korea_Swine_PEDV,
10 GD_A_ORF3_AFP81690_1_2012_02_11_China_Swine_PEDV,
11 IBR_4_JPN_2014_ORF3_BAT33306_1_2014_04_Japan_Pig_PEDV,
12 KNU_1815_ORF3_QBO24652_1_2018_03_South_Korea_Swine_PEDV,
13 PEDV_2098_1_Malaga_Casares_ORF3_QKV43818_1_2018_01_11_Spain_Swine_PEDV,
14 OH9097_14_ORF3_ALM31945_1_2014_10_19_USA_Swine_PEDV,
15 N7_GD2017_NA_QFG01707_1_2017_11_13_China_Swine_PEDV,
16 HUA_14PED96_NA_ALR74758_1_2014_10_15_Viet_Nam_Swine_PEDV,
17 IBR_7_JPN_2014_ORF3_BAT33246_1_2014_05_Japan_Pig_PEDV,
18 PEDV_AUSTRIA_L01063_M10_15_02_2015_mp_SNQ27998_1_NA_NA_Unknown_PEDV,
19 YN60_NA_ALM09376_1_2014_02_05_China_Swine_PEDV,
20 PEDV_15F_ORF3_AJP67427_1_2012_03_China_Swine_PEDV,
21 IWT_4_JPN_2014_ORF3_BAT33132_1_2014_04_Japan_Pig_PEDV,
22 JS2008_NA_AGG55746_1_2008_China_Swine_PEDV,
23 USA_Iowa161_2014_NA_AKJ21978_1_2014_02_17_USA_Swine_PEDV,
24 PEDV_8C_ORF3_AJP67409_1_NA_China_Swine_PEDV,
25 Ukraine_Poltava01_2014_NA_ALJ52505_1_2014_11_22_Ukraine_Swine_PEDV,
26 USA_Ohio69_2013_NA_AID56848_1_2013_11_24_USA_Swine_PEDV,
27 KNU_1406_1_ORF3_AIR95866_1_2014_03_South_Korea_Swine_PEDV,
28 KGS_1_JPN_2013_ORF3_BAT33138_1_2013_12_Japan_Pig_PEDV,
29 PEDV_CHZ_ORF3_AJP67433_1_2013_03_China_Swine_PEDV,
30 COL_Antioquia09796_2015_NA_QGQ60313_1_2015_07_30_Colombia_Swine_PEDV,
31 GDS38_ORF3_QCQ20009_1_2012_10_20_China_Swine_PEDV,
32 PC22A_P120_NA_APX42132_1_2015_10_01_USA_Swine_PEDV,
33 USA_Illinois98_2013_NA_AID56998_1_2013_12_11_USA_Swine_PEDV,
34 USA_Minnesota52_2013_NA_AID57082_1_2013_06_26_USA_Swine_PEDV,
35 KNU_141112_S_DEL5_ORF3_ASA40104_1_2016_01_South_Korea_Swine_PEDV,
36 PEDV_GER_L00901_V215_1978_mp_SNC44846_1_NA_NA_Unknown_PEDV,
37 COL_Cundinamarca03267_2014_NA_QGQ60229_1_2014_03_07_Colombia_Swine_PEDV,
38 Aram_P5_ORF3_QDY92476_1_2014_South_Korea_Swine_PEDV,
39 PEDV_GER_L00933_K22_14_05_2014_mp_SNQ28065_1_NA_NA_Unknown_PEDV,
40 USA_Kansas36_2013_NA_AID56716_1_2013_09_01_USA_Swine_PEDV,
41 KNU_1801_ORF3_QNC49747_1_2018_02_South_Korea_Swine_PEDV,
42 PEDV_GER_L00926_K20_4_01_2014_mp_SNQ27894_1_NA_NA_Unknown_PEDV,
43 COL_ValledelCauca05761_2015_NA_QGQ60265_1_2015_05_08_Colombia_Swine_PEDV,
44 SC1402_NA_AJW67219_1_2014_03_15_China_Swine_PEDV,
45 CH_SCAZ10_2017_ORF3_AZL47211_1_2017_11_27_China_Swine_PEDV,
46 PEDV_USA_Minnesota188_2014_NA_AIK28709_1_2014_01_22_USA_Unknown_PEDV,
47 USA_Minnesota271_2014_NA_AKJ22026_1_2014_02_20_USA_Swine_PEDV,
48 KNU_1909_NA_QOC68775_1_2019_03_South_Korea_Swine_PEDV,
49 CH_GX_2015_750A_NA_ARQ03270_1_2015_02_14_China_Swine_PEDV,
50 CV777_NA_SNX30665_1_NA_China_Unknown_PEDV,
51 USA_Minnesota73_2013_NA_AID56866_1_2013_11_25_USA_Swine_PEDV,
52 USA_Colorado420_2014_NA_AKJ22020_1_2014_09_30_USA_Swine_PEDV,
53 CH_JLDH_2016_NA_ASO67378_1_2016_07_China_Swine_PEDV,
54 MEX_104_2013_NA_AID57106_1_2013_11_03_Mexico_Swine_PEDV,
55 PEDV_GER_L01015_K01_15_05_2015_mp_SNQ28058_1_NA_NA_Unknown_PEDV,
56 FL2013_NA_AKO90056_1_2013_07_China_Swine_PEDV,
57 FR_001_2014_ORF3_AKE47379_1_2014_12_01_France_Swine_PEDV,
58 GDS06_ORF3_QCQ19931_1_2011_02_10_China_Swine_PEDV,
59 IA2_ORF3_AGY31035_1_2013_USA_Swine_PEDV,
60 KNU_1817_ORF3_QBO24664_1_2018_04_South_Korea_Swine_PEDV,
61 USA_MO_2014_03293_ORF3_AKP80632_1_2014_01_20_USA_Swine_PEDV,
62 PEDV_GER_L01060_K07_15_02_2015_mp_SNQ27913_1_NA_NA_Unknown_PEDV,
63 GDS07_ORF3_QCQ19847_1_2014_03_12_China_Swine_PEDV,
64 LW_L_NA_QBM00062_1_2010_02_China_Swine_PEDV,
65 KNU_1830_ORF3_QDZ36669_1_2018_11_South_Korea_Swine_PEDV,
66 NW17_ORF3_ATY72307_1_2015_China_Swine_PEDV,
67 USA_Minnesota212_2014_NA_AKJ21906_1_2014_02_13_USA_Swine_PEDV,
68 85_7_mutant1_ORF3_AST13222_1_2015_09_China_Unknown_PEDV,
69 PEDV_JS_A_ORF3_AZS18879_1_2017_11_10_China_Swine_PEDV,
70 GDS13_ORF3_QCQ19865_1_2012_06_15_China_Swine_PEDV,
71 PEDV_USA_Minnesota125_2015_ORF3_ANI85813_1_2015_10_20_USA_Swine_PEDV,
72 BJ_2011_C_NA_APD70935_1_2011_11_China_Swine_PEDV,
73 PEDV_1456_Zaragoza_Egea_de_los_Caballeros_ORF3_QKV43734_1_2014_04_29_Spain_Swine_PEDV,
74 USA_Minnesota309_2014_NA_AKJ22122_1_2014_04_17_USA_Swine_PEDV,
75 PEDV_MEX_GTO_02_2016_NA_AVU05341_1_2016_07_19_Mexico_Swine_PEDV,
76 GDS19_ORF3_QCQ19877_1_2012_06_04_China_Swine_PEDV,
77 GDS26_ORF3_QCQ19829_1_2012_09_17_China_Swine_PEDV,
78 USA_Kansas29_2013_NA_AID56680_1_2013_07_15_USA_Swine_PEDV,
79 attenuated_DR13_NA_AFE85970_1_NA_South_Korea_Swine_PEDV,
80 GDS33_ORF3_QCQ19901_1_2014_07_28_China_Swine_PEDV,
81 CH_GDGZ_2012_ORF3_AGR51643_1_2012_03_China_Unknown_PEDV,
82 USA_Minnesota59_2013_NA_AID56794_1_2013_11_11_USA_Swine_PEDV,
83 PEDV_MEX_JAL_04_2017_NA_AVU05390_1_2017_02_20_Mexico_Swine_PEDV,
84 GDS32_ORF3_QCQ19997_1_2013_02_06_China_Swine_PEDV,
85 CHSD2014_ORF3_AQX36343_1_2014_05_12_China_Swine_PEDV,
86 Tottori2_JPN_2014_NA_BAR92899_1_2014_10_Japan_Swine_PEDV,
87 CH_SXYL_2016_NA_ASY04644_1_2016_09_10_China_Swine_PEDV,
88 USA_Minnesota78_2013_NA_AID56896_1_2013_11_28_USA_Swine_PEDV,
89 USA_Minnesota62_2013_NA_AID56806_1_2013_11_18_USA_Swine_PEDV,
90 PEDV_MEX_MICH_02_2015_NA_AVU05446_1_2015_03_20_Mexico_Swine_PEDV
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:1.650123e-03,11:6.570599e-04,14:6.942699e-04,16:3.523676e-03,17:6.716203e-04,21:1.615432e-03,23:6.503281e-04,25:2.618028e-03,26:6.839646e-04,28:6.427142e-04,29:1.497836e-03,30:7.040768e-04,32:2.496687e-03,33:6.709858e-04,34:6.377190e-04,35:1.617643e-03,37:1.549075e-03,38:9.594153e-04,40:6.507105e-04,43:6.898992e-04,46:6.691507e-04,47:6.449550e-04,49:2.550168e-03,52:6.524221e-04,54:6.544042e-04,59:6.374650e-04,60:3.390046e-03,61:7.222004e-04,67:6.473577e-04,72:6.642688e-04,73:6.438914e-04,74:6.431594e-04,75:6.536121e-04,77:2.483999e-03,78:6.391083e-04,80:3.609467e-03,82:6.739466e-04,83:6.714457e-04,86:6.651659e-04,90:1.615924e-03,(12:6.706793e-04,65:6.292490e-04)1.000:6.366883e-03,(3:6.930624e-04,13:4.580826e-03,18:6.255739e-04,39:6.223427e-04,42:6.476603e-04,55:6.780225e-04,57:6.765727e-04,62:6.488719e-04)0.949:1.423696e-03,(71:2.735822e-03,88:7.702776e-04)0.867:1.663775e-03,(51:7.730076e-04,89:8.088117e-04)0.866:1.585649e-03,(2:2.137232e-03,(8:6.425917e-04,41:7.176297e-04,48:3.523071e-03)1.000:2.917560e-03)0.586:1.644817e-03,(((((((((4:2.471679e-03,53:1.591904e-03)1.000:3.959963e-03,45:2.055299e-03)1.000:3.488960e-03,(5:6.680429e-04,56:1.588995e-03,69:6.684717e-04)0.569:1.490084e-03,(10:1.381812e-03,64:2.585219e-03,81:3.284084e-03)0.962:2.518484e-03,19:1.976814e-02,31:6.474011e-04,84:2.623945e-03)0.838:2.324329e-03,85:5.362075e-03)0.502:3.645639e-03,58:2.024221e-03)0.998:8.815413e-03,((6:2.554120e-03,22:1.087814e-03,44:1.084132e-03,79:1.127871e-03)1.000:2.370493e-02,(((7:7.441396e-04,68:1.922530e-03)0.990:2.021045e-03,36:1.749840e-03)0.931:1.738918e-03,50:7.584134e-04)1.000:1.084959e-02)0.577:4.380268e-03,20:7.539465e-04,76:3.606146e-03)0.878:4.131694e-03,63:2.540082e-03,(66:9.741207e-04,87:1.026011e-01)0.707:1.582279e-03)0.727:1.546691e-03,15:8.197060e-03,24:1.612369e-03,70:1.319426e-03)0.562:1.730005e-03,(9:6.808249e-04,27:7.038753e-04)0.980:3.944814e-03)0.517:1.849382e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:1.650123e-03,11:6.570599e-04,14:6.942699e-04,16:3.523676e-03,17:6.716203e-04,21:1.615432e-03,23:6.503281e-04,25:2.618028e-03,26:6.839646e-04,28:6.427142e-04,29:1.497836e-03,30:7.040768e-04,32:2.496687e-03,33:6.709858e-04,34:6.377190e-04,35:1.617643e-03,37:1.549075e-03,38:9.594153e-04,40:6.507105e-04,43:6.898992e-04,46:6.691507e-04,47:6.449550e-04,49:2.550168e-03,52:6.524221e-04,54:6.544042e-04,59:6.374650e-04,60:3.390046e-03,61:7.222004e-04,67:6.473577e-04,72:6.642688e-04,73:6.438914e-04,74:6.431594e-04,75:6.536121e-04,77:2.483999e-03,78:6.391083e-04,80:3.609467e-03,82:6.739466e-04,83:6.714457e-04,86:6.651659e-04,90:1.615924e-03,(12:6.706793e-04,65:6.292490e-04):6.366883e-03,(3:6.930624e-04,13:4.580826e-03,18:6.255739e-04,39:6.223427e-04,42:6.476603e-04,55:6.780225e-04,57:6.765727e-04,62:6.488719e-04):1.423696e-03,(71:2.735822e-03,88:7.702776e-04):1.663775e-03,(51:7.730076e-04,89:8.088117e-04):1.585649e-03,(2:2.137232e-03,(8:6.425917e-04,41:7.176297e-04,48:3.523071e-03):2.917560e-03):1.644817e-03,(((((((((4:2.471679e-03,53:1.591904e-03):3.959963e-03,45:2.055299e-03):3.488960e-03,(5:6.680429e-04,56:1.588995e-03,69:6.684717e-04):1.490084e-03,(10:1.381812e-03,64:2.585219e-03,81:3.284084e-03):2.518484e-03,19:1.976814e-02,31:6.474011e-04,84:2.623945e-03):2.324329e-03,85:5.362075e-03):3.645639e-03,58:2.024221e-03):8.815413e-03,((6:2.554120e-03,22:1.087814e-03,44:1.084132e-03,79:1.127871e-03):2.370493e-02,(((7:7.441396e-04,68:1.922530e-03):2.021045e-03,36:1.749840e-03):1.738918e-03,50:7.584134e-04):1.084959e-02):4.380268e-03,20:7.539465e-04,76:3.606146e-03):4.131694e-03,63:2.540082e-03,(66:9.741207e-04,87:1.026011e-01):1.582279e-03):1.546691e-03,15:8.197060e-03,24:1.612369e-03,70:1.319426e-03):1.730005e-03,(9:6.808249e-04,27:7.038753e-04):3.944814e-03):1.849382e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1597.94 -1631.77
2 -1597.88 -1626.60
--------------------------------------
TOTAL -1597.91 -1631.08
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.209584 0.000672 0.159976 0.260605 0.207728 712.79 1106.90 1.000
r(A<->C){all} 0.141028 0.001540 0.071792 0.221910 0.138815 513.84 557.94 1.000
r(A<->G){all} 0.200779 0.002161 0.111705 0.291271 0.197789 583.95 609.66 1.000
r(A<->T){all} 0.075992 0.000555 0.030503 0.120984 0.073421 861.54 921.14 1.000
r(C<->G){all} 0.065990 0.000999 0.014304 0.131858 0.062268 640.46 674.29 1.000
r(C<->T){all} 0.396777 0.002607 0.295763 0.496783 0.394717 553.08 598.70 1.000
r(G<->T){all} 0.119434 0.000905 0.060891 0.175061 0.117081 802.42 827.70 1.000
pi(A){all} 0.229424 0.000237 0.200886 0.260892 0.229206 1126.69 1177.43 1.000
pi(C){all} 0.195045 0.000220 0.167692 0.224765 0.194943 755.62 830.44 1.000
pi(G){all} 0.197214 0.000203 0.170236 0.224697 0.196959 915.12 991.74 1.000
pi(T){all} 0.378318 0.000315 0.343173 0.413175 0.378483 1156.69 1173.12 1.000
alpha{1,2} 0.838821 0.633646 0.000494 2.340800 0.605708 800.73 1001.44 1.000
alpha{3} 1.333005 1.033418 0.073511 3.307808 1.030137 1195.30 1261.90 1.000
pinvar{all} 0.308232 0.027115 0.000129 0.568187 0.313706 523.68 688.83 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\ ***************** TYPES OF STANDARD ANALYSES ***************** (1) Selection Analyses (2) Evolutionary Hypothesis Testing (3) Relative evolutionary rate inference (4) Coevolutionary analysis (5) Basic Analyses (6) Codon Selection Analyses (7) Compartmentalization (8) Data File Tools (9) Miscellaneous (10) Model Comparison (11) Kernel Analysis Tools (12) Molecular Clock (13) Phylogeny Reconstruction (14) Positive Selection (15) Recombination (16) Selection/Recombination (17) Relative Rate (18) Relative Ratio (19) Substitution Rates Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' ***************** (1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution). (2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood). (3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting). (4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection). (5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification). (6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood). (7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation). Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types): Analysis Description -------------------- Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a coding sequence alignment to determine whether some sites have been subject to pervasive purifying or diversifying selection. v2.1 introduces two more methods for estimating the posterior distribution of grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation Bayes approximation (fastest). Please note that a FUBAR analysis generates a cache and a results JSON file in the same directory as directory as the original alignment. HyPhy needs to have write privileges to this directory. For example if the original file is in /home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there will also exist FUBAR-generated files /home/sergei/FUBAR/data/pol.nex.FUBAR.json, /home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide checkpointing so that a partially completed analysis can be restarted. - __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree (one per partition) - __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring selection (2013), Mol Biol Evol. 30(5):1196-205 - __Written by__: Sergei L Kosakovsky Pond - __Contact Information__: spond@temple.edu - __Analysis Version__: 2.1 ####Choose Genetic Code 1. [**Universal**] Universal code. (Genebank transl_table=1). 2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2). 3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3). 4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4). 5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5). 6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6). 7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9). 8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10). 9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12). 10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13). 11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14). 12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15). 13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16). 14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21). 15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22). 16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23). 17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24). 18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25). 19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26). >Please choose an option (or press q to cancel selection): >Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`) >A tree was found in the data file: `(C422,C194,C292,C185,C198,C208,C517,C642,C622,C222,C343,C87,C301,C508,C571,C234,C93,C21,C532,C99,C421,C556,C44,C481,C270,C190,C254,C538,C550,C27,C314,C562,C385,C136,C533,C144,C573,C391,C466,C397,(C252,C256),(C325,C331,C338,C361,C355,C367,C111,C373),(C416,C585),(C580,C575),(C65,(C438,C246,C258)),(((((((((C183,C55),C60),(C150,C109,C379),(C164,C266,C41),C657,C148,C142),C33),C116),((C182,C209,C436,C667),(((C11,C7),C349),C105)),C322,C129),C117,(C284,C71)),C277,C337,C123),(C229,C228)))` >Would you like to use it (y/n)? >Loaded a multiple sequence alignment with **90** sequences, **224** codons, and **1** partitions from `/data//pss_subsets/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1.fna` > FUBAR will write cache and result files to _/data//pss_subsets/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1/LZW_NA_AIJ01342_1_2012_02_China_Unknown_PEDV.result.1.fna.FUBAR.json_, respectively > Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer): ####Posterior estimation method 1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation) 2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed) 3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default) >Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5): ### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model * Log(L) = -2488.23, AIC-c = 5220.96 (122 estimated parameters) * Tree length (expected substitutions/site) for partition 1 : 0.492 ### Computing the phylogenetic likelihood function on the grid * Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid * Best scaling achieved for * synonymous rate = 1.227 * non-synonymous rate = 0.714 * Computing conditional site likelihoods on a 20 x 20 rate grid ### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights * Using the following settings * Dirichlet alpha : 0.5 ### Tabulating site-level results | Codon | Partition | alpha | beta |Posterior prob for positive selection| |:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:| | 80 | 1 | 0.896 | 5.378 | Pos. posterior = 0.9146 | | 168 | 1 | 0.705 | 4.272 | Pos. posterior = 0.9061 | | 182 | 1 | 1.871 | 11.444 | Pos. posterior = 0.9218 | | 196 | 1 | 1.450 | 8.228 | Pos. posterior = 0.9062 | ---- ## FUBAR inferred 4 sites subject to diversifying positive selection at posterior probability >= 0.9 Of these, 0.35 are expected to be false positives (95% confidence interval of 0-2 )
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
