--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -7369.75 -7385.13
2 -7369.96 -7385.79
--------------------------------------
TOTAL -7369.85 -7385.51
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.477215 0.007045 0.333221 0.656635 0.464919 1128.01 1163.17 1.001
r(A<->C){all} 0.031584 0.000536 0.000063 0.075476 0.027052 620.91 636.50 1.001
r(A<->G){all} 0.268303 0.002844 0.177091 0.380057 0.265668 366.17 444.01 1.000
r(A<->T){all} 0.056912 0.000327 0.021006 0.090728 0.055893 791.37 810.27 1.000
r(C<->G){all} 0.053914 0.000552 0.011471 0.099103 0.050985 746.76 759.87 1.000
r(C<->T){all} 0.561272 0.003488 0.443246 0.673230 0.561507 363.98 452.79 1.000
r(G<->T){all} 0.028016 0.000187 0.004568 0.054030 0.026170 685.77 879.44 1.000
pi(A){all} 0.264615 0.000046 0.251666 0.278127 0.264537 1095.44 1144.96 1.000
pi(C){all} 0.189354 0.000033 0.177531 0.200019 0.189325 1056.28 1102.41 1.000
pi(G){all} 0.217093 0.000039 0.204122 0.227911 0.217226 978.75 1057.56 1.000
pi(T){all} 0.328938 0.000048 0.314807 0.341412 0.328905 1105.75 1159.08 1.000
alpha{1,2} 0.029212 0.000356 0.000010 0.062156 0.027597 1025.77 1053.64 1.000
alpha{3} 4.503595 2.597207 1.726028 7.589136 4.244605 1404.30 1452.65 1.000
pinvar{all} 0.596905 0.000648 0.547338 0.645285 0.598930 1359.50 1425.50 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
-- Starting log on Wed Nov 02 20:10:42 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.11 sec, SCORE=1000, Nseq=6, Len=1376
C1 MLFVFILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLGT
C2 MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
C3 MLFVFILFLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
C4 MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
C5 MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
C6 MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
*******:*************** ** ** *.********:*:**:****
C1 YYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQF
C2 YYVLDRVYLNTTLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
C3 YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
C4 YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
C5 YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
C6 YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
**********:*************::*********::**:**:**:**:*
C1 NDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYNSYTVVIEPYNGVIMA
C2 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
C3 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
C4 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
C5 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
C6 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
*************.**:***:************ .*****:****.:***
C1 SVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNAD
C2 SVCIYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
C3 SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
C4 SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
C5 SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
C6 SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
*** ********* ********::*************:******:****
C1 AFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPPA
C2 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
C3 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
C4 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
C5 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
C6 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
:******:******************************:******.*.*
C1 GSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSML
C2 GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
C3 GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
C4 GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
C5 GSTLLPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
C6 GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
***: * ******:*********:************** *********:*
C1 PSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERKT
C2 PSTGVYDLSSYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
C3 PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
C4 PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
C5 PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
C6 PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
******:**.*************.*** *:*******:**********:*
C1 FQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSRQ
C2 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
C3 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
C4 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
C5 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
C6 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
******************** *********** ****:******:*****
C1 VDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRRY
C2 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
C3 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
C4 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
C5 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
C6 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
:***:**********************:*:**********:*********
C1 GFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSAF
C2 GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
C3 GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
C4 GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
C5 GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
C6 GFNDAGVFGKSNHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
**********.:***.*********.************.**:**** **:
C1 --------------------------------------------------
C2 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPLDTYDLRCGQIK
C3 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
C4 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
C5 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
C6 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
C1 --VNVGDHCEGLGVLEDKCGNADPHKGCICANNSFIGWSHDTCLVNDRCQ
C2 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
C3 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
C4 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
C5 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
C6 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
*******************:****** ***:*****************
C1 IFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKEVK
C2 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
C3 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
C4 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
C5 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
C6 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
***************************.**:**:****************
C1 ADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDAPE
C2 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
C3 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
C4 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
C5 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
C6 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
********:**********************************:**:***
C1 PALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C2 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C3 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C4 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C5 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C6 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
**************:***********************************
C1 LRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGLYE
C2 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
C3 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
C4 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
C5 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
C6 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
*****************:*************** ***********.****
C1 MQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSFCV
C2 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
C3 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
C4 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
C5 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
C6 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
***************** *:***************:*************
C1 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C2 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C3 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C4 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C5 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C6 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
**************************************************
C1 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C2 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C3 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C4 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C5 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C6 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
**************************************************
C1 EVLDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGVPF
C2 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
C3 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
C4 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
C5 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
C6 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
** ***************************:***********:*******
C1 SLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALGKI
C2 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
C3 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
C4 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
C5 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
C6 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
**.**********************************:************
C1 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRLIN
C2 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
C3 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
C4 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
C5 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
C6 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
************************************:*************
C1 GRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNGNH
C2 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
C3 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
C4 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
C5 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
C6 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
*********************.****************************
C1 ILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYFVQ
C2 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
C3 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
C4 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
C5 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
C6 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
************ ******** **.*************************
C1 DDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNPPD
C2 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
C3 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
C4 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
C5 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
C6 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
*:********.*************:* ***************.**** **
C1 FKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLNES
C2 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
C3 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
C4 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
C5 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
C6 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
*****************************:********************
C1 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFK
C2 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
C3 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
C4 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
C5 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
C6 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
*************************************************:
C1 KCGNCCDEYGGHQDSIVIHNISSHED
C2 KCGSCCDEYGGHQDSIVIHNISAHED
C3 KCGSCCDEYGGHQDSIVIHNISAHED
C4 KCGSCCDEYGGHQDSIVIHNISAHED
C5 KCGSCCDEYGGHQDSIVIHNISAHED
C6 KCGSCCDEYGGHQDSIVIHNISAHED
***.******************:***
-- Starting log on Wed Nov 02 20:12:39 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.11 sec, SCORE=999, Nseq=6, Len=1376
C1 MLFVFILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLGT
C2 MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
C3 MLFVFILFLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
C4 MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
C5 MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
C6 MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
*******:*************** ** ** *.********:*:**:****
C1 YYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQF
C2 YYVLDRVYLNTTLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
C3 YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
C4 YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
C5 YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
C6 YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
**********:*************::*********::**:**:**:**:*
C1 NDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYNSYTVVIEPYNGVIMA
C2 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
C3 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
C4 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
C5 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
C6 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
*************.**:***:************ .*****:****.:***
C1 SVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNAD
C2 SVCIYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
C3 SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
C4 SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
C5 SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
C6 SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
*** ********* ********::*************:******:****
C1 AFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPPA
C2 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
C3 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
C4 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
C5 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
C6 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
:******:******************************:******.*.*
C1 GSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSML
C2 GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
C3 GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
C4 GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
C5 GSTLLPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
C6 GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
***: * ******:*********:************** *********:*
C1 PSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERKT
C2 PSTGVYDLSSYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
C3 PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
C4 PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
C5 PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
C6 PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
******:**.*************.*** *:*******:**********:*
C1 FQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSRQ
C2 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
C3 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
C4 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
C5 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
C6 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
******************** *********** ****:******:*****
C1 VDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRRY
C2 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
C3 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
C4 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
C5 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
C6 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
:***:**********************:*:**********:*********
C1 GFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSAF
C2 GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
C3 GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
C4 GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
C5 GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
C6 GFNDAGVFGKSNHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
**********.:***.*********.************.**:**** **:
C1 --------------------------------------------------
C2 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPLDTYDLRCGQIK
C3 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
C4 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
C5 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
C6 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
C1 --VNVGDHCEGLGVLEDKCGNADPHKGCICANNSFIGWSHDTCLVNDRCQ
C2 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
C3 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
C4 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
C5 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
C6 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
*******************:****** ***:*****************
C1 IFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKEVK
C2 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
C3 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
C4 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
C5 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
C6 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
***************************.**:**:****************
C1 ADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDAPE
C2 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
C3 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
C4 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
C5 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
C6 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
********:**********************************:**:***
C1 PALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C2 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C3 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C4 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C5 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C6 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
**************:***********************************
C1 LRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGLYE
C2 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
C3 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
C4 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
C5 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
C6 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
*****************:*************** ***********.****
C1 MQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSFCV
C2 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
C3 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
C4 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
C5 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
C6 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
***************** *:***************:*************
C1 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C2 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C3 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C4 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C5 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C6 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
**************************************************
C1 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C2 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C3 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C4 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C5 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C6 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
**************************************************
C1 EVLDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGVPF
C2 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
C3 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
C4 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
C5 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
C6 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
** ***************************:***********:*******
C1 SLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALGKI
C2 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
C3 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
C4 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
C5 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
C6 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
**.**********************************:************
C1 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRLIN
C2 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
C3 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
C4 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
C5 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
C6 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
************************************:*************
C1 GRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNGNH
C2 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
C3 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
C4 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
C5 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
C6 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
*********************.****************************
C1 ILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYFVQ
C2 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
C3 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
C4 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
C5 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
C6 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
************ ******** **.*************************
C1 DDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNPPD
C2 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
C3 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
C4 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
C5 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
C6 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
*:********.*************:* ***************.**** **
C1 FKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLNES
C2 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
C3 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
C4 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
C5 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
C6 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
*****************************:********************
C1 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFK
C2 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
C3 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
C4 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
C5 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
C6 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
*************************************************:
C1 KCGNCCDEYGGHQDSIVIHNISSHED
C2 KCGSCCDEYGGHQDSIVIHNISAHED
C3 KCGSCCDEYGGHQDSIVIHNISAHED
C4 KCGSCCDEYGGHQDSIVIHNISAHED
C5 KCGSCCDEYGGHQDSIVIHNISAHED
C6 KCGSCCDEYGGHQDSIVIHNISAHED
***.******************:***
-- Starting log on Wed Nov 02 20:10:42 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.11 sec, SCORE=1000, Nseq=6, Len=1376
C1 MLFVFILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLGT
C2 MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
C3 MLFVFILFLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
C4 MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
C5 MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
C6 MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
*******:*************** ** ** *.********:*:**:****
C1 YYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQF
C2 YYVLDRVYLNTTLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
C3 YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
C4 YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
C5 YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
C6 YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
**********:*************::*********::**:**:**:**:*
C1 NDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYNSYTVVIEPYNGVIMA
C2 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
C3 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
C4 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
C5 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
C6 NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
*************.**:***:************ .*****:****.:***
C1 SVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNAD
C2 SVCIYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
C3 SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
C4 SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
C5 SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
C6 SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
*** ********* ********::*************:******:****
C1 AFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPPA
C2 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
C3 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
C4 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
C5 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
C6 WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
:******:******************************:******.*.*
C1 GSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSML
C2 GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
C3 GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
C4 GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
C5 GSTLLPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
C6 GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
***: * ******:*********:************** *********:*
C1 PSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERKT
C2 PSTGVYDLSSYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
C3 PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
C4 PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
C5 PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
C6 PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
******:**.*************.*** *:*******:**********:*
C1 FQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSRQ
C2 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
C3 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
C4 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
C5 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
C6 FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
******************** *********** ****:******:*****
C1 VDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRRY
C2 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
C3 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
C4 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
C5 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
C6 IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
:***:**********************:*:**********:*********
C1 GFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSAF
C2 GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
C3 GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
C4 GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
C5 GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
C6 GFNDAGVFGKSNHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
**********.:***.*********.************.**:**** **:
C1 --------------------------------------------------
C2 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPLDTYDLRCGQIK
C3 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
C4 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
C5 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
C6 CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
C1 --VNVGDHCEGLGVLEDKCGNADPHKGCICANNSFIGWSHDTCLVNDRCQ
C2 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
C3 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
C4 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
C5 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
C6 TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
*******************:****** ***:*****************
C1 IFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKEVK
C2 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
C3 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
C4 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
C5 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
C6 IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
***************************.**:**:****************
C1 ADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDAPE
C2 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
C3 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
C4 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
C5 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
C6 ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
********:**********************************:**:***
C1 PALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C2 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C3 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C4 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C5 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
C6 PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
**************:***********************************
C1 LRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGLYE
C2 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
C3 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
C4 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
C5 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
C6 LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
*****************:*************** ***********.****
C1 MQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSFCV
C2 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
C3 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
C4 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
C5 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
C6 MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
***************** *:***************:*************
C1 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C2 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C3 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C4 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C5 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
C6 NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
**************************************************
C1 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C2 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C3 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C4 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C5 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
C6 LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
**************************************************
C1 EVLDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGVPF
C2 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
C3 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
C4 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
C5 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
C6 EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
** ***************************:***********:*******
C1 SLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALGKI
C2 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
C3 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
C4 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
C5 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
C6 SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
**.**********************************:************
C1 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRLIN
C2 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
C3 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
C4 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
C5 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
C6 QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
************************************:*************
C1 GRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNGNH
C2 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
C3 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
C4 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
C5 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
C6 GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
*********************.****************************
C1 ILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYFVQ
C2 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
C3 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
C4 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
C5 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
C6 ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
************ ******** **.*************************
C1 DDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNPPD
C2 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
C3 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
C4 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
C5 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
C6 DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
*:********.*************:* ***************.**** **
C1 FKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLNES
C2 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
C3 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
C4 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
C5 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
C6 FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
*****************************:********************
C1 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFK
C2 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
C3 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
C4 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
C5 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
C6 YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
*************************************************:
C1 KCGNCCDEYGGHQDSIVIHNISSHED
C2 KCGSCCDEYGGHQDSIVIHNISAHED
C3 KCGSCCDEYGGHQDSIVIHNISAHED
C4 KCGSCCDEYGGHQDSIVIHNISAHED
C5 KCGSCCDEYGGHQDSIVIHNISAHED
C6 KCGSCCDEYGGHQDSIVIHNISAHED
***.******************:***
-- Starting log on Wed Nov 02 21:20:07 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/gapped_alignment/fubar,A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 6 taxa and 4128 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C2
Taxon 3 -> C3
Taxon 4 -> C4
Taxon 5 -> C5
Taxon 6 -> C6
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1667424009
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 341391363
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 8057825737
Seed = 1071309386
Swapseed = 1667424009
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 25 unique site patterns
Division 2 has 22 unique site patterns
Division 3 has 28 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -8649.697701 -- 21.927696
Chain 2 -- -8637.275545 -- 21.927696
Chain 3 -- -8644.989552 -- 21.927696
Chain 4 -- -8618.223084 -- 21.927696
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -8649.697777 -- 21.927696
Chain 2 -- -8647.943548 -- 21.927696
Chain 3 -- -8646.363507 -- 21.927696
Chain 4 -- -8627.165824 -- 21.927696
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-8649.698] (-8637.276) (-8644.990) (-8618.223) * [-8649.698] (-8647.944) (-8646.364) (-8627.166)
1000 -- (-7553.307) (-7519.508) (-7480.886) [-7467.478] * (-7478.638) (-7512.001) [-7481.616] (-7516.142) -- 0:00:00
2000 -- (-7457.520) (-7484.493) (-7413.538) [-7429.414] * [-7408.748] (-7453.898) (-7445.407) (-7440.649) -- 0:08:19
3000 -- (-7450.908) (-7438.428) (-7401.281) [-7395.131] * [-7386.428] (-7419.562) (-7405.574) (-7406.706) -- 0:05:32
4000 -- (-7395.577) (-7395.779) [-7385.814] (-7395.949) * [-7371.709] (-7390.603) (-7391.322) (-7386.531) -- 0:04:09
5000 -- (-7402.489) (-7385.619) [-7375.765] (-7392.372) * (-7377.574) (-7380.423) [-7374.658] (-7378.253) -- 0:03:19
Average standard deviation of split frequencies: 0.031427
6000 -- (-7378.750) (-7381.649) [-7380.135] (-7385.257) * [-7378.276] (-7397.833) (-7373.759) (-7381.422) -- 0:05:31
7000 -- (-7377.339) (-7376.741) [-7375.220] (-7380.686) * (-7378.395) [-7380.260] (-7375.190) (-7378.552) -- 0:04:43
8000 -- (-7374.038) (-7374.101) [-7373.474] (-7380.599) * (-7383.809) (-7382.814) (-7371.656) [-7373.590] -- 0:04:08
9000 -- [-7378.085] (-7377.153) (-7371.468) (-7390.304) * [-7372.185] (-7386.438) (-7374.507) (-7372.065) -- 0:03:40
10000 -- (-7382.007) (-7371.768) [-7378.000] (-7379.286) * [-7371.518] (-7378.143) (-7375.455) (-7376.645) -- 0:04:57
Average standard deviation of split frequencies: 0.066291
11000 -- (-7372.685) [-7374.696] (-7372.695) (-7387.852) * (-7374.152) [-7377.325] (-7380.257) (-7369.927) -- 0:04:29
12000 -- (-7379.987) (-7380.313) [-7375.714] (-7379.343) * (-7388.765) (-7380.142) (-7373.020) [-7371.762] -- 0:04:07
13000 -- (-7372.805) (-7375.914) (-7388.252) [-7373.354] * (-7374.874) (-7373.036) [-7378.461] (-7376.738) -- 0:03:47
14000 -- (-7385.608) (-7377.695) [-7372.981] (-7378.866) * (-7387.299) [-7376.301] (-7376.485) (-7371.110) -- 0:03:31
15000 -- (-7373.584) [-7374.206] (-7373.925) (-7374.775) * (-7385.165) (-7378.626) (-7375.049) [-7370.318] -- 0:04:22
Average standard deviation of split frequencies: 0.035355
16000 -- (-7381.549) (-7374.201) (-7380.047) [-7376.737] * (-7378.442) (-7372.402) (-7373.020) [-7372.526] -- 0:04:06
17000 -- (-7376.388) (-7378.890) (-7375.113) [-7375.095] * [-7377.484] (-7370.184) (-7385.109) (-7374.787) -- 0:03:51
18000 -- (-7376.090) [-7378.877] (-7375.936) (-7374.091) * (-7372.395) [-7370.483] (-7388.264) (-7379.931) -- 0:03:38
19000 -- (-7373.991) [-7372.578] (-7370.513) (-7383.041) * (-7374.870) (-7370.891) [-7376.497] (-7382.297) -- 0:03:26
20000 -- (-7381.808) [-7366.624] (-7370.681) (-7373.612) * (-7377.927) [-7374.976] (-7375.421) (-7385.144) -- 0:04:05
Average standard deviation of split frequencies: 0.054744
21000 -- (-7374.313) [-7366.767] (-7377.865) (-7371.285) * (-7368.229) (-7375.177) [-7370.559] (-7369.669) -- 0:03:53
22000 -- (-7374.731) [-7372.574] (-7368.182) (-7382.819) * [-7372.477] (-7374.937) (-7380.080) (-7383.755) -- 0:03:42
23000 -- (-7376.184) (-7373.532) [-7372.311] (-7373.952) * (-7368.352) [-7370.071] (-7377.160) (-7379.816) -- 0:03:32
24000 -- (-7375.698) (-7372.023) [-7370.786] (-7372.730) * (-7381.662) (-7377.963) (-7378.013) [-7382.210] -- 0:04:04
25000 -- (-7381.432) (-7367.147) (-7374.462) [-7371.576] * (-7378.030) [-7371.518] (-7379.913) (-7378.199) -- 0:03:54
Average standard deviation of split frequencies: 0.039888
26000 -- (-7385.971) (-7372.085) (-7370.838) [-7377.235] * [-7377.087] (-7375.823) (-7382.749) (-7376.616) -- 0:03:44
27000 -- (-7378.366) (-7381.066) (-7368.794) [-7374.257] * (-7371.670) (-7372.660) [-7371.729] (-7388.767) -- 0:03:36
28000 -- (-7376.697) (-7375.238) (-7372.294) [-7373.338] * [-7369.093] (-7370.671) (-7380.339) (-7380.844) -- 0:03:28
29000 -- (-7370.832) (-7366.369) [-7374.886] (-7382.532) * [-7373.987] (-7368.032) (-7380.357) (-7380.023) -- 0:03:54
30000 -- [-7378.317] (-7371.342) (-7373.216) (-7377.590) * (-7370.241) [-7372.574] (-7380.850) (-7376.778) -- 0:03:46
Average standard deviation of split frequencies: 0.052264
31000 -- [-7378.291] (-7375.118) (-7374.886) (-7379.100) * [-7378.258] (-7371.505) (-7372.964) (-7376.560) -- 0:03:38
32000 -- (-7380.748) (-7379.284) [-7373.087] (-7374.316) * [-7372.378] (-7380.540) (-7371.569) (-7374.977) -- 0:03:31
33000 -- (-7381.560) [-7372.295] (-7372.538) (-7376.313) * (-7377.663) (-7373.142) (-7371.438) [-7374.398] -- 0:03:25
34000 -- (-7381.110) [-7375.293] (-7374.201) (-7374.364) * (-7384.730) (-7381.673) (-7370.180) [-7371.327] -- 0:03:47
35000 -- (-7377.420) (-7374.232) [-7375.672] (-7373.043) * (-7375.272) (-7379.863) (-7378.436) [-7381.933] -- 0:03:40
Average standard deviation of split frequencies: 0.039284
36000 -- [-7376.321] (-7373.019) (-7368.693) (-7370.972) * [-7376.812] (-7380.725) (-7380.178) (-7386.637) -- 0:03:34
37000 -- (-7384.423) (-7374.705) [-7376.184] (-7384.314) * (-7374.737) [-7373.688] (-7373.015) (-7376.709) -- 0:03:28
38000 -- (-7382.471) (-7370.850) (-7371.883) [-7380.037] * (-7375.123) (-7379.543) [-7372.730] (-7376.326) -- 0:03:47
39000 -- (-7375.619) [-7380.550] (-7378.816) (-7380.223) * (-7381.364) (-7379.311) [-7367.357] (-7373.541) -- 0:03:41
40000 -- (-7383.349) (-7371.801) (-7375.286) [-7377.506] * (-7379.526) [-7371.173] (-7375.369) (-7372.742) -- 0:03:36
Average standard deviation of split frequencies: 0.039413
41000 -- (-7372.949) [-7376.174] (-7370.558) (-7386.536) * [-7374.484] (-7376.266) (-7381.520) (-7380.513) -- 0:03:30
42000 -- [-7372.451] (-7378.571) (-7379.986) (-7370.537) * [-7370.930] (-7373.081) (-7374.084) (-7369.059) -- 0:03:48
43000 -- (-7377.977) [-7376.417] (-7374.852) (-7381.053) * (-7380.911) (-7375.689) (-7376.668) [-7377.477] -- 0:03:42
44000 -- [-7370.353] (-7372.905) (-7385.519) (-7377.997) * (-7377.973) (-7374.734) (-7371.453) [-7379.059] -- 0:03:37
45000 -- (-7376.516) (-7372.651) [-7374.292] (-7378.315) * (-7385.908) (-7376.477) (-7374.394) [-7373.091] -- 0:03:32
Average standard deviation of split frequencies: 0.049190
46000 -- (-7371.473) (-7370.444) [-7371.788] (-7371.860) * (-7382.999) [-7377.880] (-7377.249) (-7370.734) -- 0:03:27
47000 -- (-7367.648) (-7377.030) (-7387.483) [-7368.063] * (-7379.038) (-7377.005) [-7371.933] (-7373.387) -- 0:03:43
48000 -- [-7374.069] (-7370.803) (-7371.502) (-7372.982) * [-7382.908] (-7370.819) (-7384.979) (-7371.671) -- 0:03:38
49000 -- [-7372.797] (-7378.018) (-7376.222) (-7380.491) * (-7377.906) (-7381.403) (-7374.358) [-7375.889] -- 0:03:33
50000 -- (-7377.473) (-7373.668) [-7370.225] (-7374.664) * (-7383.422) (-7372.029) (-7373.708) [-7378.817] -- 0:03:29
Average standard deviation of split frequencies: 0.042799
51000 -- (-7379.171) (-7375.221) [-7373.974] (-7379.247) * [-7375.845] (-7371.460) (-7375.333) (-7378.582) -- 0:03:24
52000 -- (-7380.788) (-7374.690) [-7371.505] (-7377.495) * (-7380.065) (-7381.911) [-7370.163] (-7374.612) -- 0:03:38
53000 -- (-7372.738) (-7369.434) (-7368.562) [-7376.106] * [-7370.616] (-7376.765) (-7378.228) (-7376.371) -- 0:03:34
54000 -- (-7369.095) [-7370.338] (-7368.408) (-7377.254) * (-7377.187) (-7380.128) (-7381.858) [-7379.238] -- 0:03:30
55000 -- (-7385.718) (-7374.700) [-7375.639] (-7372.725) * (-7379.118) (-7375.406) (-7382.339) [-7374.632] -- 0:03:26
Average standard deviation of split frequencies: 0.045457
56000 -- [-7389.949] (-7378.271) (-7374.186) (-7377.463) * (-7381.341) [-7381.072] (-7384.958) (-7372.815) -- 0:03:39
57000 -- (-7374.921) [-7371.340] (-7373.760) (-7384.491) * (-7366.641) [-7376.021] (-7374.191) (-7368.454) -- 0:03:35
58000 -- (-7375.387) [-7371.104] (-7373.219) (-7379.227) * (-7375.563) (-7373.323) (-7376.074) [-7373.272] -- 0:03:31
59000 -- (-7376.299) [-7371.167] (-7372.469) (-7378.503) * (-7374.005) [-7375.020] (-7369.739) (-7373.659) -- 0:03:27
60000 -- (-7381.864) (-7378.700) (-7386.685) [-7375.765] * [-7375.504] (-7368.316) (-7368.578) (-7375.232) -- 0:03:23
Average standard deviation of split frequencies: 0.045068
61000 -- (-7378.310) (-7382.435) (-7373.247) [-7374.677] * [-7370.043] (-7372.461) (-7375.151) (-7375.018) -- 0:03:35
62000 -- (-7372.083) (-7378.952) (-7376.520) [-7374.774] * (-7373.115) (-7391.369) (-7375.627) [-7374.450] -- 0:03:31
63000 -- (-7388.881) (-7371.238) (-7375.981) [-7374.510] * (-7368.258) (-7374.898) [-7373.810] (-7368.753) -- 0:03:28
64000 -- (-7391.960) (-7380.960) [-7372.837] (-7377.600) * (-7376.461) (-7383.866) (-7373.676) [-7372.513] -- 0:03:24
65000 -- [-7383.938] (-7374.191) (-7373.961) (-7383.109) * (-7379.789) (-7388.064) [-7373.668] (-7375.017) -- 0:03:21
Average standard deviation of split frequencies: 0.035712
66000 -- [-7379.686] (-7372.873) (-7368.976) (-7374.017) * [-7372.912] (-7375.640) (-7376.497) (-7377.988) -- 0:03:32
67000 -- (-7379.512) (-7383.836) [-7373.080] (-7376.743) * (-7366.418) (-7377.828) (-7375.243) [-7371.531] -- 0:03:28
68000 -- (-7374.560) (-7370.569) [-7374.719] (-7387.369) * (-7383.929) (-7387.724) (-7373.170) [-7374.330] -- 0:03:25
69000 -- (-7377.676) [-7370.823] (-7372.846) (-7380.255) * (-7381.052) (-7372.733) [-7373.495] (-7377.596) -- 0:03:22
70000 -- (-7380.272) (-7372.396) (-7379.888) [-7378.485] * (-7374.886) (-7377.587) [-7372.386] (-7372.789) -- 0:03:32
Average standard deviation of split frequencies: 0.036022
71000 -- (-7377.539) (-7369.962) [-7374.569] (-7372.690) * (-7373.479) (-7367.647) (-7375.933) [-7367.935] -- 0:03:29
72000 -- (-7377.307) [-7375.558] (-7381.006) (-7379.716) * (-7373.541) (-7369.730) (-7372.785) [-7369.495] -- 0:03:26
73000 -- (-7375.935) [-7379.231] (-7369.365) (-7374.214) * [-7368.261] (-7376.905) (-7370.794) (-7375.737) -- 0:03:23
74000 -- (-7371.121) [-7379.430] (-7375.666) (-7372.988) * [-7371.999] (-7372.389) (-7383.427) (-7377.796) -- 0:03:20
75000 -- (-7375.865) [-7373.858] (-7388.788) (-7375.167) * (-7377.495) [-7370.061] (-7380.357) (-7377.833) -- 0:03:29
Average standard deviation of split frequencies: 0.024811
76000 -- (-7371.022) [-7370.779] (-7380.797) (-7376.181) * [-7376.010] (-7377.867) (-7382.521) (-7369.808) -- 0:03:26
77000 -- (-7371.903) (-7381.448) (-7375.168) [-7384.232] * [-7373.379] (-7377.789) (-7377.008) (-7377.752) -- 0:03:23
78000 -- (-7375.876) [-7375.944] (-7379.055) (-7384.376) * (-7381.312) (-7389.881) (-7374.543) [-7373.704] -- 0:03:20
79000 -- [-7374.370] (-7389.826) (-7377.121) (-7383.971) * (-7373.895) (-7371.860) [-7373.459] (-7383.124) -- 0:03:29
80000 -- (-7375.418) (-7380.372) (-7378.234) [-7375.551] * (-7379.882) (-7375.515) [-7371.685] (-7371.773) -- 0:03:27
Average standard deviation of split frequencies: 0.024544
81000 -- (-7369.722) (-7379.292) [-7373.416] (-7370.486) * (-7374.041) (-7374.579) [-7370.984] (-7376.045) -- 0:03:24
82000 -- (-7368.582) [-7375.167] (-7386.241) (-7373.814) * (-7380.964) [-7370.310] (-7378.884) (-7371.952) -- 0:03:21
83000 -- [-7366.697] (-7373.515) (-7382.553) (-7376.035) * (-7383.475) (-7373.762) [-7371.758] (-7377.343) -- 0:03:18
84000 -- (-7377.645) [-7368.923] (-7390.078) (-7377.662) * (-7377.908) [-7380.249] (-7382.990) (-7372.763) -- 0:03:27
85000 -- [-7379.925] (-7375.235) (-7372.938) (-7372.871) * (-7376.806) (-7373.174) (-7375.964) [-7374.860] -- 0:03:24
Average standard deviation of split frequencies: 0.017541
86000 -- (-7373.283) (-7373.311) [-7374.069] (-7385.618) * (-7381.830) (-7377.138) [-7380.240] (-7375.629) -- 0:03:21
87000 -- [-7376.250] (-7378.010) (-7375.302) (-7379.842) * [-7382.197] (-7376.803) (-7374.043) (-7381.511) -- 0:03:19
88000 -- (-7378.250) (-7378.248) [-7374.368] (-7372.247) * (-7374.045) (-7378.967) (-7375.254) [-7384.094] -- 0:03:27
89000 -- (-7382.599) [-7371.148] (-7377.367) (-7385.689) * (-7376.931) (-7377.695) [-7374.595] (-7386.034) -- 0:03:24
90000 -- (-7376.132) [-7376.334] (-7370.038) (-7381.115) * (-7376.457) [-7375.947] (-7372.160) (-7377.004) -- 0:03:22
Average standard deviation of split frequencies: 0.022877
91000 -- (-7376.683) [-7374.171] (-7379.422) (-7381.498) * (-7381.869) [-7377.306] (-7376.679) (-7370.801) -- 0:03:19
92000 -- [-7368.522] (-7373.137) (-7379.001) (-7371.697) * (-7378.485) (-7373.727) (-7372.292) [-7371.281] -- 0:03:17
93000 -- (-7375.685) (-7376.779) (-7368.480) [-7369.846] * (-7375.539) [-7379.958] (-7392.251) (-7369.055) -- 0:03:24
94000 -- (-7376.303) (-7370.978) (-7379.423) [-7376.175] * (-7375.839) (-7380.524) (-7370.753) [-7368.783] -- 0:03:22
95000 -- (-7378.271) [-7369.145] (-7382.230) (-7374.644) * (-7392.985) [-7371.732] (-7376.321) (-7372.790) -- 0:03:20
Average standard deviation of split frequencies: 0.025534
96000 -- [-7374.666] (-7373.240) (-7370.594) (-7376.858) * (-7375.799) (-7371.676) [-7370.620] (-7373.594) -- 0:03:17
97000 -- [-7375.390] (-7369.727) (-7372.895) (-7372.940) * [-7375.607] (-7374.147) (-7373.523) (-7371.729) -- 0:03:15
98000 -- [-7373.037] (-7376.748) (-7369.406) (-7372.506) * (-7371.219) (-7378.444) (-7369.188) [-7373.853] -- 0:03:22
99000 -- (-7376.518) [-7376.676] (-7370.344) (-7381.086) * (-7377.484) (-7375.448) [-7378.608] (-7385.726) -- 0:03:20
100000 -- [-7371.276] (-7369.592) (-7374.784) (-7380.625) * (-7371.851) (-7379.104) (-7380.197) [-7368.044] -- 0:03:18
Average standard deviation of split frequencies: 0.019668
101000 -- [-7373.613] (-7378.064) (-7378.339) (-7381.113) * (-7373.144) (-7376.585) (-7368.351) [-7372.720] -- 0:03:15
102000 -- [-7378.892] (-7374.272) (-7371.369) (-7377.329) * (-7372.972) (-7372.105) [-7367.890] (-7373.959) -- 0:03:22
103000 -- (-7382.203) (-7379.011) [-7373.015] (-7373.374) * (-7378.471) (-7378.580) [-7381.474] (-7384.684) -- 0:03:20
104000 -- (-7374.673) (-7376.431) (-7373.845) [-7369.209] * [-7375.871] (-7379.601) (-7373.923) (-7376.577) -- 0:03:18
105000 -- (-7379.143) [-7367.301] (-7380.029) (-7374.920) * (-7384.355) (-7375.506) (-7370.128) [-7372.489] -- 0:03:16
Average standard deviation of split frequencies: 0.024015
106000 -- [-7368.922] (-7373.420) (-7376.375) (-7371.491) * (-7372.922) [-7377.986] (-7370.369) (-7374.923) -- 0:03:13
107000 -- [-7374.074] (-7377.056) (-7382.156) (-7380.943) * [-7373.042] (-7383.153) (-7375.314) (-7374.791) -- 0:03:20
108000 -- (-7371.206) [-7374.284] (-7376.624) (-7375.949) * (-7372.270) [-7372.755] (-7378.970) (-7376.908) -- 0:03:18
109000 -- (-7370.670) (-7379.137) [-7375.050] (-7376.447) * (-7380.652) [-7369.967] (-7376.294) (-7375.760) -- 0:03:16
110000 -- [-7381.602] (-7377.835) (-7375.410) (-7379.052) * (-7380.109) (-7374.002) [-7373.369] (-7374.913) -- 0:03:14
Average standard deviation of split frequencies: 0.026410
111000 -- (-7382.208) [-7378.552] (-7376.714) (-7375.406) * (-7383.543) (-7371.365) (-7372.482) [-7373.495] -- 0:03:12
112000 -- (-7379.090) (-7371.503) [-7374.542] (-7379.005) * (-7381.368) [-7374.349] (-7376.239) (-7372.602) -- 0:03:18
113000 -- (-7380.825) (-7375.403) [-7372.593] (-7379.253) * (-7371.686) [-7375.819] (-7373.970) (-7385.495) -- 0:03:16
114000 -- [-7372.475] (-7372.026) (-7372.810) (-7373.776) * (-7377.371) (-7385.543) (-7375.350) [-7382.958] -- 0:03:14
115000 -- (-7382.802) (-7373.645) (-7375.461) [-7378.810] * [-7374.547] (-7383.210) (-7381.433) (-7378.676) -- 0:03:12
Average standard deviation of split frequencies: 0.024383
116000 -- (-7373.456) (-7378.571) [-7371.574] (-7373.952) * [-7372.957] (-7379.687) (-7372.337) (-7373.747) -- 0:03:18
117000 -- (-7374.445) [-7376.627] (-7372.442) (-7378.983) * [-7377.809] (-7374.317) (-7371.044) (-7380.869) -- 0:03:16
118000 -- [-7366.529] (-7377.527) (-7373.797) (-7375.274) * [-7372.123] (-7374.576) (-7372.358) (-7384.769) -- 0:03:14
119000 -- (-7376.629) [-7373.077] (-7375.382) (-7380.630) * (-7373.556) (-7373.551) (-7374.947) [-7371.723] -- 0:03:12
120000 -- (-7382.117) [-7370.188] (-7374.143) (-7380.651) * [-7374.527] (-7370.087) (-7373.177) (-7373.782) -- 0:03:10
Average standard deviation of split frequencies: 0.018752
121000 -- (-7378.099) [-7373.398] (-7375.239) (-7381.748) * (-7372.996) (-7367.889) (-7374.402) [-7379.277] -- 0:03:16
122000 -- (-7378.594) [-7369.362] (-7373.389) (-7370.086) * (-7373.336) [-7374.620] (-7374.467) (-7386.306) -- 0:03:14
123000 -- [-7371.199] (-7370.300) (-7378.385) (-7366.879) * (-7384.169) (-7375.979) (-7372.612) [-7375.695] -- 0:03:12
124000 -- (-7374.335) (-7371.605) (-7373.510) [-7369.573] * [-7372.492] (-7372.682) (-7369.620) (-7380.212) -- 0:03:10
125000 -- (-7383.928) (-7371.870) [-7373.258] (-7371.953) * [-7371.648] (-7379.250) (-7379.871) (-7375.140) -- 0:03:09
Average standard deviation of split frequencies: 0.017958
126000 -- (-7375.052) [-7369.668] (-7373.997) (-7383.042) * (-7369.815) [-7368.479] (-7372.737) (-7376.988) -- 0:03:14
127000 -- [-7376.860] (-7372.625) (-7372.421) (-7376.157) * (-7377.360) [-7369.906] (-7376.940) (-7373.662) -- 0:03:12
128000 -- (-7383.201) [-7370.862] (-7370.625) (-7376.117) * (-7383.500) (-7372.092) (-7376.413) [-7370.910] -- 0:03:10
129000 -- (-7377.077) (-7381.002) (-7380.540) [-7370.364] * (-7381.751) (-7376.830) (-7372.734) [-7368.611] -- 0:03:09
130000 -- [-7375.676] (-7382.337) (-7372.050) (-7374.054) * (-7372.991) (-7372.537) [-7375.194] (-7374.567) -- 0:03:14
Average standard deviation of split frequencies: 0.016595
131000 -- (-7379.770) (-7373.271) [-7375.945] (-7378.478) * (-7369.071) [-7368.968] (-7373.227) (-7370.365) -- 0:03:12
132000 -- (-7370.374) (-7372.760) (-7391.220) [-7375.099] * (-7379.553) (-7380.413) [-7373.256] (-7369.953) -- 0:03:10
133000 -- [-7372.532] (-7374.386) (-7372.015) (-7374.773) * (-7377.154) (-7368.597) [-7373.618] (-7371.769) -- 0:03:09
134000 -- (-7379.329) (-7372.010) [-7374.091] (-7374.711) * (-7377.653) (-7378.461) (-7372.680) [-7372.042] -- 0:03:07
135000 -- [-7378.991] (-7370.474) (-7373.248) (-7377.954) * (-7377.697) [-7373.049] (-7376.490) (-7375.248) -- 0:03:12
Average standard deviation of split frequencies: 0.015945
136000 -- (-7376.768) [-7374.065] (-7370.242) (-7374.081) * (-7379.998) (-7382.392) (-7380.156) [-7379.073] -- 0:03:10
137000 -- [-7369.116] (-7376.236) (-7387.624) (-7379.285) * (-7375.757) (-7369.768) (-7378.643) [-7372.726] -- 0:03:08
138000 -- (-7383.250) (-7370.201) [-7369.975] (-7375.588) * [-7375.541] (-7386.522) (-7378.971) (-7375.725) -- 0:03:07
139000 -- (-7384.079) (-7382.037) (-7373.530) [-7369.237] * (-7370.438) [-7374.366] (-7371.844) (-7381.019) -- 0:03:05
140000 -- [-7375.701] (-7376.272) (-7373.355) (-7377.771) * (-7368.474) (-7381.408) (-7379.654) [-7376.541] -- 0:03:10
Average standard deviation of split frequencies: 0.012064
141000 -- (-7370.943) [-7374.427] (-7376.071) (-7370.979) * (-7376.109) (-7378.624) [-7376.258] (-7371.686) -- 0:03:08
142000 -- (-7377.074) (-7371.438) (-7370.922) [-7366.619] * [-7373.305] (-7377.111) (-7372.561) (-7368.873) -- 0:03:07
143000 -- (-7374.643) (-7376.795) [-7373.677] (-7370.549) * (-7373.796) [-7369.842] (-7379.248) (-7368.848) -- 0:03:05
144000 -- (-7383.209) (-7370.405) (-7371.476) [-7372.098] * (-7377.785) (-7375.774) (-7379.245) [-7374.808] -- 0:03:10
145000 -- (-7389.919) (-7370.546) [-7376.827] (-7365.397) * (-7375.030) (-7375.444) [-7370.967] (-7380.710) -- 0:03:08
Average standard deviation of split frequencies: 0.014207
146000 -- (-7375.048) [-7370.041] (-7376.272) (-7378.360) * (-7378.098) (-7377.523) (-7377.297) [-7375.769] -- 0:03:07
147000 -- (-7380.227) (-7374.352) [-7379.200] (-7375.047) * [-7370.543] (-7373.740) (-7377.768) (-7380.320) -- 0:03:05
148000 -- [-7371.442] (-7372.361) (-7374.312) (-7396.747) * (-7370.644) [-7368.652] (-7373.253) (-7387.013) -- 0:03:04
149000 -- (-7373.454) [-7370.975] (-7372.201) (-7384.901) * (-7375.911) [-7369.111] (-7376.561) (-7378.668) -- 0:03:08
150000 -- (-7370.034) (-7376.883) [-7376.027] (-7378.077) * (-7373.906) [-7372.377] (-7371.614) (-7373.792) -- 0:03:07
Average standard deviation of split frequencies: 0.022527
151000 -- (-7379.219) (-7373.991) (-7380.454) [-7368.062] * [-7376.500] (-7371.988) (-7385.793) (-7385.485) -- 0:03:05
152000 -- (-7375.816) (-7371.579) [-7371.755] (-7377.444) * (-7376.708) (-7375.565) (-7379.465) [-7372.806] -- 0:03:04
153000 -- (-7371.626) [-7373.181] (-7378.365) (-7374.647) * [-7374.777] (-7373.633) (-7379.595) (-7387.649) -- 0:03:02
154000 -- (-7373.113) [-7365.379] (-7365.122) (-7379.414) * [-7370.448] (-7377.987) (-7379.566) (-7375.473) -- 0:03:06
155000 -- [-7370.066] (-7373.966) (-7370.168) (-7379.393) * (-7378.014) (-7383.641) [-7366.799] (-7373.970) -- 0:03:05
Average standard deviation of split frequencies: 0.020548
156000 -- [-7374.576] (-7371.119) (-7374.401) (-7373.065) * (-7381.022) (-7374.994) (-7371.670) [-7379.034] -- 0:03:03
157000 -- [-7367.508] (-7375.767) (-7377.656) (-7373.177) * [-7372.538] (-7374.999) (-7373.386) (-7378.294) -- 0:03:02
158000 -- [-7374.546] (-7374.549) (-7373.585) (-7376.264) * (-7378.642) (-7378.183) [-7366.375] (-7379.577) -- 0:03:01
159000 -- (-7374.566) (-7369.585) (-7376.014) [-7371.938] * (-7382.502) (-7372.620) [-7373.388] (-7373.369) -- 0:03:05
160000 -- [-7369.475] (-7371.016) (-7377.996) (-7374.651) * (-7373.725) [-7372.656] (-7385.989) (-7370.875) -- 0:03:03
Average standard deviation of split frequencies: 0.019952
161000 -- (-7373.064) (-7378.952) (-7369.669) [-7370.718] * [-7370.749] (-7372.423) (-7382.729) (-7374.240) -- 0:03:02
162000 -- [-7370.779] (-7383.424) (-7382.786) (-7371.741) * [-7377.828] (-7371.106) (-7381.264) (-7378.078) -- 0:03:01
163000 -- (-7379.413) [-7373.397] (-7377.747) (-7375.996) * (-7375.506) (-7373.729) (-7375.569) [-7371.152] -- 0:03:04
164000 -- [-7377.231] (-7377.215) (-7384.319) (-7379.562) * (-7370.306) [-7371.215] (-7378.734) (-7372.144) -- 0:03:03
165000 -- (-7369.928) (-7384.413) [-7376.244] (-7376.592) * [-7368.935] (-7377.962) (-7373.059) (-7376.132) -- 0:03:02
Average standard deviation of split frequencies: 0.018743
166000 -- [-7371.359] (-7380.450) (-7376.842) (-7384.281) * [-7373.953] (-7377.183) (-7380.349) (-7376.772) -- 0:03:00
167000 -- [-7372.820] (-7378.000) (-7370.615) (-7370.232) * (-7376.364) [-7369.396] (-7374.084) (-7375.141) -- 0:02:59
168000 -- (-7376.022) (-7378.471) (-7371.919) [-7369.180] * [-7377.602] (-7380.507) (-7383.131) (-7369.827) -- 0:03:03
169000 -- (-7377.112) (-7378.272) (-7374.879) [-7370.093] * (-7380.951) (-7377.478) [-7371.623] (-7371.831) -- 0:03:01
170000 -- (-7373.939) [-7381.315] (-7376.603) (-7374.876) * (-7379.152) (-7380.827) (-7379.917) [-7376.909] -- 0:03:00
Average standard deviation of split frequencies: 0.019887
171000 -- (-7384.499) (-7373.403) [-7374.677] (-7375.585) * [-7371.230] (-7377.452) (-7377.554) (-7372.282) -- 0:02:59
172000 -- (-7376.739) (-7371.220) [-7375.521] (-7379.634) * [-7377.326] (-7375.778) (-7370.296) (-7373.396) -- 0:03:02
173000 -- (-7374.386) (-7373.584) (-7370.868) [-7377.178] * [-7369.705] (-7377.059) (-7377.405) (-7384.327) -- 0:03:01
174000 -- [-7373.567] (-7369.566) (-7375.009) (-7379.627) * [-7369.729] (-7367.357) (-7380.596) (-7379.566) -- 0:03:00
175000 -- (-7372.957) (-7380.937) [-7372.912] (-7379.309) * (-7376.001) (-7370.989) (-7370.971) [-7380.161] -- 0:03:03
Average standard deviation of split frequencies: 0.020892
176000 -- (-7373.925) (-7371.206) [-7369.096] (-7382.911) * (-7372.875) (-7375.271) [-7376.878] (-7377.868) -- 0:03:02
177000 -- [-7375.604] (-7383.943) (-7381.796) (-7375.708) * [-7374.738] (-7368.758) (-7372.459) (-7376.147) -- 0:03:01
178000 -- (-7377.245) (-7388.992) (-7373.991) [-7373.571] * (-7377.779) (-7372.913) (-7377.222) [-7379.101] -- 0:03:00
179000 -- (-7384.747) (-7376.856) [-7382.206] (-7383.877) * [-7374.431] (-7371.616) (-7372.953) (-7381.063) -- 0:03:03
180000 -- (-7372.979) [-7374.385] (-7382.512) (-7380.344) * [-7369.614] (-7371.326) (-7371.902) (-7381.578) -- 0:03:02
Average standard deviation of split frequencies: 0.020874
181000 -- [-7376.201] (-7377.696) (-7381.739) (-7382.601) * (-7382.382) [-7368.386] (-7369.179) (-7376.523) -- 0:03:00
182000 -- [-7369.586] (-7385.065) (-7372.558) (-7381.297) * [-7374.077] (-7384.542) (-7376.192) (-7377.914) -- 0:02:59
183000 -- (-7369.761) (-7371.739) (-7378.274) [-7375.213] * (-7370.136) (-7377.725) (-7385.353) [-7367.658] -- 0:02:58
184000 -- (-7379.586) (-7373.354) [-7371.196] (-7374.886) * (-7372.663) [-7369.379] (-7375.273) (-7374.844) -- 0:03:01
185000 -- (-7377.788) (-7373.687) (-7374.652) [-7375.907] * (-7377.939) (-7376.893) (-7378.990) [-7377.158] -- 0:03:00
Average standard deviation of split frequencies: 0.024331
186000 -- (-7375.514) (-7375.022) (-7372.167) [-7379.076] * (-7377.333) [-7380.643] (-7372.064) (-7376.893) -- 0:02:59
187000 -- (-7369.665) (-7367.477) [-7374.329] (-7387.177) * [-7370.401] (-7367.228) (-7378.559) (-7372.251) -- 0:02:58
188000 -- (-7372.805) [-7381.670] (-7379.386) (-7379.841) * (-7372.375) (-7378.533) (-7373.505) [-7369.413] -- 0:02:57
189000 -- (-7373.176) (-7373.103) [-7374.884] (-7386.720) * (-7372.792) [-7383.232] (-7376.052) (-7371.758) -- 0:03:00
190000 -- (-7382.284) (-7371.463) (-7384.840) [-7381.613] * [-7374.445] (-7385.795) (-7370.493) (-7377.887) -- 0:02:59
Average standard deviation of split frequencies: 0.025713
191000 -- (-7374.858) (-7371.991) [-7380.470] (-7370.396) * (-7370.158) (-7374.102) (-7374.058) [-7372.579] -- 0:02:57
192000 -- (-7381.299) (-7385.726) (-7381.919) [-7371.739] * (-7373.638) [-7381.012] (-7370.378) (-7386.563) -- 0:02:56
193000 -- (-7380.592) [-7368.646] (-7377.115) (-7369.559) * (-7387.068) [-7370.991] (-7367.745) (-7386.612) -- 0:02:59
194000 -- (-7371.057) (-7376.577) [-7378.277] (-7369.689) * [-7377.270] (-7373.584) (-7379.650) (-7378.804) -- 0:02:58
195000 -- [-7382.550] (-7380.908) (-7369.633) (-7383.518) * (-7373.236) [-7374.116] (-7375.870) (-7381.908) -- 0:02:57
Average standard deviation of split frequencies: 0.027418
196000 -- (-7383.470) [-7376.962] (-7373.114) (-7374.630) * (-7371.409) (-7375.779) [-7374.363] (-7386.037) -- 0:02:56
197000 -- (-7375.780) (-7368.908) [-7377.112] (-7371.144) * (-7370.929) (-7375.214) [-7370.259] (-7381.154) -- 0:02:55
198000 -- [-7376.699] (-7378.083) (-7369.698) (-7377.723) * [-7381.659] (-7372.195) (-7379.091) (-7382.276) -- 0:02:58
199000 -- (-7388.023) (-7374.592) (-7375.408) [-7370.265] * [-7375.156] (-7381.248) (-7374.321) (-7373.315) -- 0:02:57
200000 -- [-7375.047] (-7378.616) (-7381.305) (-7372.635) * (-7373.162) [-7377.920] (-7375.607) (-7375.229) -- 0:02:56
Average standard deviation of split frequencies: 0.026781
201000 -- (-7377.258) [-7371.615] (-7372.066) (-7370.694) * (-7376.588) [-7369.763] (-7376.462) (-7373.221) -- 0:02:54
202000 -- (-7383.235) (-7376.288) [-7370.717] (-7376.170) * [-7369.823] (-7373.841) (-7372.257) (-7372.368) -- 0:02:57
203000 -- (-7380.506) (-7380.107) (-7379.431) [-7378.184] * (-7380.258) [-7369.778] (-7376.294) (-7374.564) -- 0:02:56
204000 -- (-7381.908) (-7377.476) [-7373.302] (-7373.496) * [-7382.346] (-7377.522) (-7378.663) (-7378.230) -- 0:02:55
205000 -- (-7379.309) [-7373.260] (-7369.552) (-7384.779) * (-7391.242) [-7372.195] (-7371.106) (-7376.166) -- 0:02:54
Average standard deviation of split frequencies: 0.027460
206000 -- (-7379.275) (-7375.461) (-7382.690) [-7371.828] * (-7383.374) (-7371.895) [-7373.018] (-7385.324) -- 0:02:53
207000 -- (-7369.807) (-7382.604) (-7371.003) [-7371.865] * [-7374.627] (-7381.315) (-7382.899) (-7384.665) -- 0:02:56
208000 -- [-7369.037] (-7372.128) (-7379.508) (-7374.234) * [-7380.219] (-7380.699) (-7374.215) (-7381.101) -- 0:02:55
209000 -- (-7373.537) (-7379.686) [-7371.463] (-7374.561) * (-7373.754) (-7378.547) [-7373.600] (-7381.855) -- 0:02:54
210000 -- [-7387.303] (-7379.636) (-7375.990) (-7376.286) * (-7379.786) [-7380.650] (-7368.743) (-7374.559) -- 0:02:53
Average standard deviation of split frequencies: 0.026852
211000 -- (-7389.015) [-7373.881] (-7379.185) (-7378.353) * [-7370.634] (-7378.159) (-7374.813) (-7373.152) -- 0:02:52
212000 -- (-7373.918) [-7371.162] (-7374.756) (-7373.872) * [-7378.474] (-7384.344) (-7376.607) (-7377.551) -- 0:02:54
213000 -- (-7375.650) [-7367.738] (-7372.738) (-7377.084) * (-7370.802) (-7374.372) (-7385.849) [-7370.058] -- 0:02:53
214000 -- (-7368.600) (-7369.904) [-7367.603] (-7372.533) * [-7376.479] (-7373.071) (-7376.648) (-7380.452) -- 0:02:52
215000 -- (-7376.523) [-7369.736] (-7374.476) (-7374.240) * (-7380.509) [-7380.505] (-7381.875) (-7380.579) -- 0:02:51
Average standard deviation of split frequencies: 0.030118
216000 -- (-7374.427) (-7372.389) [-7375.202] (-7370.678) * (-7375.972) (-7384.521) [-7369.384] (-7375.204) -- 0:02:54
217000 -- (-7372.293) (-7378.200) [-7373.658] (-7380.058) * (-7377.465) (-7376.219) [-7374.115] (-7375.559) -- 0:02:53
218000 -- (-7375.991) (-7375.392) [-7371.520] (-7378.992) * (-7378.160) (-7383.005) (-7375.144) [-7370.892] -- 0:02:52
219000 -- (-7378.233) (-7376.812) (-7375.891) [-7370.456] * [-7380.099] (-7380.503) (-7379.640) (-7371.511) -- 0:02:51
220000 -- [-7371.923] (-7377.137) (-7370.780) (-7375.467) * (-7369.906) [-7369.263] (-7376.296) (-7372.831) -- 0:02:50
Average standard deviation of split frequencies: 0.026917
221000 -- (-7370.723) [-7369.063] (-7371.521) (-7378.991) * (-7373.682) (-7378.590) [-7373.773] (-7379.261) -- 0:02:52
222000 -- (-7376.294) (-7382.914) [-7382.501] (-7376.872) * (-7380.652) [-7368.050] (-7378.910) (-7378.644) -- 0:02:51
223000 -- [-7375.573] (-7369.469) (-7373.151) (-7371.497) * (-7370.766) (-7378.934) [-7370.236] (-7375.990) -- 0:02:50
224000 -- (-7375.516) (-7372.832) [-7375.592] (-7371.120) * (-7375.900) (-7380.553) [-7367.701] (-7373.669) -- 0:02:49
225000 -- (-7380.179) [-7372.156] (-7374.165) (-7369.924) * (-7375.750) (-7379.251) (-7370.699) [-7379.850] -- 0:02:48
Average standard deviation of split frequencies: 0.027116
226000 -- [-7373.425] (-7372.886) (-7372.042) (-7375.500) * (-7383.270) (-7378.391) [-7369.850] (-7378.917) -- 0:02:51
227000 -- (-7381.248) (-7376.503) [-7375.807] (-7374.868) * (-7381.182) [-7371.496] (-7379.376) (-7372.556) -- 0:02:50
228000 -- (-7373.276) (-7377.372) (-7372.745) [-7374.891] * (-7381.731) (-7374.106) (-7380.762) [-7371.934] -- 0:02:49
229000 -- (-7371.661) [-7370.328] (-7385.191) (-7380.336) * (-7376.743) [-7377.617] (-7379.308) (-7379.756) -- 0:02:48
230000 -- [-7373.831] (-7373.642) (-7372.832) (-7373.743) * (-7375.642) [-7377.161] (-7383.517) (-7368.337) -- 0:02:50
Average standard deviation of split frequencies: 0.024524
231000 -- (-7376.649) (-7380.104) [-7381.664] (-7379.209) * [-7370.901] (-7373.189) (-7381.517) (-7371.364) -- 0:02:49
232000 -- (-7371.306) [-7374.734] (-7378.505) (-7375.034) * (-7366.845) (-7376.359) (-7374.758) [-7374.145] -- 0:02:48
233000 -- (-7378.659) [-7372.810] (-7377.948) (-7379.570) * (-7379.997) (-7373.196) [-7373.713] (-7376.701) -- 0:02:47
234000 -- (-7376.269) (-7371.930) [-7367.087] (-7381.545) * (-7368.805) (-7379.820) [-7376.287] (-7386.299) -- 0:02:46
235000 -- [-7372.221] (-7373.986) (-7376.572) (-7371.256) * [-7373.227] (-7370.693) (-7379.539) (-7375.260) -- 0:02:49
Average standard deviation of split frequencies: 0.023970
236000 -- (-7372.984) (-7373.526) [-7386.664] (-7370.385) * [-7372.416] (-7368.810) (-7378.184) (-7374.425) -- 0:02:48
237000 -- [-7378.415] (-7373.792) (-7386.910) (-7376.052) * [-7368.412] (-7371.640) (-7382.563) (-7374.071) -- 0:02:47
238000 -- (-7377.181) [-7375.932] (-7374.934) (-7371.768) * (-7372.359) (-7370.051) [-7373.063] (-7375.466) -- 0:02:46
239000 -- (-7384.238) (-7380.515) [-7368.704] (-7374.098) * [-7378.536] (-7373.095) (-7374.834) (-7377.991) -- 0:02:45
240000 -- [-7378.366] (-7378.260) (-7378.264) (-7376.671) * (-7379.926) (-7372.137) (-7371.560) [-7369.219] -- 0:02:47
Average standard deviation of split frequencies: 0.023113
241000 -- (-7374.283) [-7371.195] (-7369.271) (-7371.118) * (-7374.914) (-7370.413) (-7389.038) [-7371.686] -- 0:02:46
242000 -- (-7372.547) (-7372.752) (-7376.432) [-7372.705] * (-7384.039) (-7373.863) [-7373.723] (-7373.709) -- 0:02:46
243000 -- [-7377.911] (-7388.371) (-7375.453) (-7375.200) * (-7376.321) (-7376.811) (-7371.035) [-7373.032] -- 0:02:45
244000 -- [-7370.578] (-7382.794) (-7382.222) (-7375.994) * (-7378.404) (-7377.675) [-7372.586] (-7373.086) -- 0:02:47
245000 -- (-7377.096) (-7366.539) (-7385.603) [-7369.599] * (-7382.618) (-7371.368) [-7374.966] (-7380.693) -- 0:02:46
Average standard deviation of split frequencies: 0.023762
246000 -- (-7379.914) [-7374.843] (-7384.388) (-7370.568) * [-7375.398] (-7383.873) (-7382.753) (-7373.818) -- 0:02:45
247000 -- (-7383.913) (-7378.720) [-7375.289] (-7372.028) * (-7375.972) (-7378.262) [-7370.646] (-7374.532) -- 0:02:44
248000 -- (-7376.680) (-7375.783) (-7369.941) [-7373.819] * [-7376.101] (-7383.372) (-7376.642) (-7381.857) -- 0:02:43
249000 -- (-7373.020) [-7374.479] (-7373.825) (-7372.008) * [-7377.055] (-7376.457) (-7385.051) (-7381.583) -- 0:02:45
250000 -- (-7374.114) [-7373.946] (-7377.756) (-7367.685) * (-7378.095) (-7385.398) (-7375.898) [-7377.217] -- 0:02:45
Average standard deviation of split frequencies: 0.024072
251000 -- (-7372.809) [-7377.023] (-7389.221) (-7373.448) * (-7386.524) (-7379.574) (-7373.472) [-7369.037] -- 0:02:44
252000 -- (-7373.935) (-7372.810) (-7372.453) [-7377.177] * (-7377.163) (-7370.230) (-7384.312) [-7373.888] -- 0:02:43
253000 -- [-7379.676] (-7384.787) (-7382.576) (-7380.007) * (-7370.862) (-7372.670) (-7378.082) [-7376.477] -- 0:02:42
254000 -- (-7379.843) (-7388.086) (-7372.977) [-7380.128] * (-7370.496) [-7377.076] (-7373.978) (-7373.285) -- 0:02:44
255000 -- (-7374.369) (-7368.671) [-7370.580] (-7380.778) * (-7372.851) (-7376.966) [-7371.570] (-7384.223) -- 0:02:43
Average standard deviation of split frequencies: 0.025043
256000 -- (-7377.533) (-7374.128) [-7375.116] (-7382.855) * (-7371.526) (-7383.145) (-7374.068) [-7379.145] -- 0:02:42
257000 -- (-7374.069) (-7369.461) (-7377.252) [-7367.953] * [-7372.466] (-7375.239) (-7374.578) (-7374.818) -- 0:02:41
258000 -- (-7385.234) (-7375.860) (-7375.953) [-7376.237] * (-7372.949) (-7384.232) [-7376.694] (-7376.368) -- 0:02:43
259000 -- [-7374.130] (-7371.887) (-7373.648) (-7383.670) * (-7380.116) (-7378.982) [-7372.380] (-7375.400) -- 0:02:43
260000 -- [-7371.818] (-7381.451) (-7369.747) (-7375.880) * (-7379.603) (-7385.316) [-7369.069] (-7375.435) -- 0:02:42
Average standard deviation of split frequencies: 0.025318
261000 -- [-7376.039] (-7375.650) (-7374.412) (-7373.254) * (-7371.279) (-7384.771) [-7378.131] (-7381.668) -- 0:02:41
262000 -- (-7375.398) (-7383.929) [-7375.168] (-7374.075) * (-7377.434) (-7380.121) (-7378.449) [-7373.592] -- 0:02:40
263000 -- (-7382.987) [-7376.900] (-7380.966) (-7376.756) * (-7372.704) (-7374.243) [-7368.448] (-7373.604) -- 0:02:42
264000 -- [-7379.620] (-7372.803) (-7380.739) (-7374.313) * [-7373.163] (-7372.503) (-7374.576) (-7371.056) -- 0:02:41
265000 -- (-7380.960) [-7379.651] (-7380.759) (-7378.291) * (-7382.024) (-7375.446) (-7379.395) [-7378.727] -- 0:02:40
Average standard deviation of split frequencies: 0.024811
266000 -- (-7370.914) [-7376.372] (-7377.881) (-7370.131) * (-7385.449) (-7370.727) (-7371.756) [-7384.201] -- 0:02:40
267000 -- (-7379.743) (-7386.939) (-7374.970) [-7376.348] * (-7383.699) [-7372.673] (-7374.480) (-7371.082) -- 0:02:41
268000 -- (-7371.074) (-7378.150) [-7377.567] (-7367.352) * (-7383.150) (-7368.196) [-7371.867] (-7371.816) -- 0:02:41
269000 -- (-7374.824) (-7383.515) [-7378.818] (-7375.767) * (-7376.026) (-7374.197) [-7376.488] (-7369.701) -- 0:02:40
270000 -- [-7380.423] (-7379.019) (-7381.747) (-7381.145) * [-7374.636] (-7375.559) (-7378.031) (-7371.028) -- 0:02:39
Average standard deviation of split frequencies: 0.026473
271000 -- (-7371.698) (-7378.556) (-7378.854) [-7374.765] * (-7375.249) [-7376.786] (-7373.203) (-7381.083) -- 0:02:38
272000 -- (-7381.855) (-7371.932) (-7381.124) [-7369.583] * [-7373.981] (-7381.572) (-7378.050) (-7386.228) -- 0:02:40
273000 -- (-7382.654) (-7374.481) (-7372.524) [-7377.433] * (-7372.620) (-7373.973) [-7369.051] (-7386.378) -- 0:02:39
274000 -- (-7371.290) [-7382.480] (-7372.545) (-7379.996) * (-7388.992) (-7388.368) (-7368.500) [-7382.476] -- 0:02:38
275000 -- (-7368.903) [-7374.130] (-7388.205) (-7375.809) * (-7373.369) [-7374.580] (-7383.322) (-7384.998) -- 0:02:38
Average standard deviation of split frequencies: 0.025620
276000 -- [-7375.628] (-7371.932) (-7373.974) (-7372.920) * [-7368.025] (-7385.906) (-7382.296) (-7379.840) -- 0:02:37
277000 -- (-7383.482) (-7373.064) [-7375.147] (-7368.875) * (-7373.618) (-7377.581) [-7370.328] (-7384.715) -- 0:02:39
278000 -- (-7376.325) (-7379.515) [-7377.682] (-7375.812) * (-7374.460) (-7382.086) [-7366.351] (-7377.153) -- 0:02:38
279000 -- [-7376.904] (-7376.551) (-7386.676) (-7373.313) * [-7375.506] (-7369.302) (-7374.226) (-7376.183) -- 0:02:37
280000 -- (-7374.739) [-7373.640] (-7376.497) (-7371.317) * (-7384.752) (-7376.635) [-7371.350] (-7382.192) -- 0:02:36
Average standard deviation of split frequencies: 0.025866
281000 -- (-7373.683) (-7374.365) [-7378.050] (-7374.205) * (-7385.494) (-7375.846) (-7372.079) [-7380.840] -- 0:02:38
282000 -- (-7379.061) (-7372.366) (-7371.656) [-7375.449] * (-7374.260) (-7382.098) (-7370.783) [-7370.846] -- 0:02:37
283000 -- (-7374.305) [-7374.170] (-7374.803) (-7372.519) * (-7375.245) (-7377.664) (-7379.122) [-7375.350] -- 0:02:37
284000 -- (-7383.838) (-7383.487) (-7386.240) [-7377.449] * (-7381.127) (-7388.946) [-7378.673] (-7379.778) -- 0:02:36
285000 -- (-7378.281) (-7385.136) [-7380.065] (-7372.337) * (-7379.745) (-7386.139) (-7378.883) [-7377.573] -- 0:02:35
Average standard deviation of split frequencies: 0.028021
286000 -- [-7372.863] (-7373.564) (-7373.868) (-7380.045) * (-7375.229) [-7375.660] (-7370.989) (-7382.106) -- 0:02:37
287000 -- (-7376.527) [-7367.690] (-7377.075) (-7371.914) * (-7367.970) [-7373.760] (-7376.220) (-7381.211) -- 0:02:36
288000 -- (-7375.636) (-7388.122) [-7368.158] (-7374.819) * (-7371.155) (-7377.226) (-7379.829) [-7385.732] -- 0:02:35
289000 -- (-7370.658) (-7371.540) [-7373.876] (-7367.366) * (-7377.159) [-7369.763] (-7372.612) (-7371.307) -- 0:02:34
290000 -- (-7371.576) [-7373.832] (-7376.577) (-7375.170) * (-7382.917) (-7380.240) (-7374.914) [-7370.183] -- 0:02:34
Average standard deviation of split frequencies: 0.024327
291000 -- (-7372.828) (-7373.440) [-7370.534] (-7373.988) * (-7380.579) [-7369.451] (-7371.977) (-7376.688) -- 0:02:35
292000 -- (-7378.284) [-7370.918] (-7372.351) (-7387.686) * (-7378.981) (-7374.162) [-7373.100] (-7368.747) -- 0:02:35
293000 -- (-7371.148) (-7376.495) (-7370.413) [-7375.762] * (-7382.783) (-7388.065) (-7377.072) [-7368.693] -- 0:02:34
294000 -- [-7369.284] (-7379.898) (-7381.190) (-7377.963) * (-7378.889) (-7381.890) [-7373.261] (-7368.457) -- 0:02:33
295000 -- [-7368.154] (-7377.922) (-7375.324) (-7378.594) * [-7378.012] (-7371.100) (-7376.132) (-7381.271) -- 0:02:35
Average standard deviation of split frequencies: 0.024526
296000 -- (-7378.311) (-7373.935) (-7388.184) [-7376.319] * (-7375.013) (-7369.700) [-7378.130] (-7373.883) -- 0:02:34
297000 -- (-7376.626) (-7373.215) (-7380.220) [-7369.092] * [-7369.686] (-7373.823) (-7372.987) (-7374.702) -- 0:02:33
298000 -- [-7378.171] (-7375.668) (-7372.368) (-7381.963) * [-7377.189] (-7370.047) (-7374.400) (-7376.182) -- 0:02:33
299000 -- (-7377.919) (-7376.376) (-7369.406) [-7370.306] * (-7374.801) (-7380.357) (-7371.775) [-7371.546] -- 0:02:32
300000 -- (-7378.231) (-7375.949) [-7374.813] (-7372.811) * (-7370.710) [-7382.105] (-7376.708) (-7375.536) -- 0:02:34
Average standard deviation of split frequencies: 0.021637
301000 -- [-7370.959] (-7381.141) (-7379.011) (-7377.081) * (-7376.194) [-7371.373] (-7374.238) (-7374.618) -- 0:02:33
302000 -- [-7371.541] (-7380.760) (-7373.508) (-7377.233) * (-7379.821) [-7367.322] (-7372.994) (-7367.984) -- 0:02:32
303000 -- [-7371.002] (-7377.350) (-7378.529) (-7371.305) * (-7370.529) (-7375.823) (-7368.567) [-7379.745] -- 0:02:31
304000 -- (-7370.691) [-7371.505] (-7381.575) (-7377.495) * (-7375.318) (-7376.903) [-7366.977] (-7371.571) -- 0:02:33
305000 -- (-7377.237) (-7370.676) [-7382.844] (-7377.957) * (-7374.405) (-7381.332) [-7378.825] (-7380.314) -- 0:02:32
Average standard deviation of split frequencies: 0.020643
306000 -- (-7372.738) [-7371.696] (-7387.883) (-7372.462) * (-7371.468) (-7374.300) (-7371.690) [-7377.105] -- 0:02:31
307000 -- (-7377.883) (-7370.734) (-7376.858) [-7377.259] * [-7370.880] (-7376.251) (-7381.813) (-7374.343) -- 0:02:31
308000 -- [-7372.694] (-7372.000) (-7371.049) (-7385.622) * (-7380.049) [-7370.762] (-7383.791) (-7380.239) -- 0:02:30
309000 -- (-7377.494) [-7372.594] (-7372.190) (-7374.029) * (-7376.370) [-7367.690] (-7377.773) (-7379.247) -- 0:02:32
310000 -- (-7385.565) [-7378.296] (-7371.023) (-7372.102) * [-7384.809] (-7382.173) (-7377.046) (-7382.011) -- 0:02:31
Average standard deviation of split frequencies: 0.019423
311000 -- [-7373.616] (-7376.256) (-7377.635) (-7372.052) * [-7374.268] (-7379.493) (-7383.406) (-7375.429) -- 0:02:30
312000 -- (-7371.188) [-7372.739] (-7368.667) (-7372.515) * (-7377.148) (-7381.271) (-7378.513) [-7371.206] -- 0:02:29
313000 -- (-7373.611) (-7374.659) [-7378.500] (-7379.747) * (-7374.732) [-7383.723] (-7376.292) (-7375.038) -- 0:02:31
314000 -- (-7377.932) (-7376.671) (-7389.038) [-7377.603] * (-7377.905) (-7377.402) (-7379.006) [-7379.253] -- 0:02:30
315000 -- [-7367.522] (-7379.614) (-7388.981) (-7376.330) * (-7379.578) (-7382.075) [-7374.979] (-7369.195) -- 0:02:30
Average standard deviation of split frequencies: 0.018498
316000 -- (-7372.982) [-7374.700] (-7377.743) (-7380.486) * [-7378.059] (-7384.154) (-7382.881) (-7372.416) -- 0:02:29
317000 -- (-7374.827) (-7385.414) (-7386.229) [-7373.957] * (-7383.136) (-7382.923) (-7379.791) [-7377.832] -- 0:02:28
318000 -- [-7369.493] (-7380.588) (-7374.369) (-7373.915) * (-7375.484) (-7379.484) [-7375.508] (-7385.641) -- 0:02:30
319000 -- (-7380.618) (-7380.289) (-7373.003) [-7371.783] * (-7373.977) [-7371.721] (-7382.311) (-7372.907) -- 0:02:29
320000 -- [-7380.654] (-7373.483) (-7373.137) (-7376.238) * [-7369.303] (-7371.972) (-7379.493) (-7371.972) -- 0:02:28
Average standard deviation of split frequencies: 0.015877
321000 -- (-7379.479) [-7372.289] (-7370.894) (-7373.348) * (-7377.035) (-7369.180) [-7386.466] (-7370.812) -- 0:02:28
322000 -- (-7377.758) (-7379.082) [-7374.238] (-7371.538) * [-7374.003] (-7371.631) (-7377.947) (-7383.922) -- 0:02:27
323000 -- (-7390.104) (-7377.236) [-7370.058] (-7378.478) * (-7381.358) [-7374.228] (-7375.988) (-7373.418) -- 0:02:28
324000 -- (-7376.546) (-7379.737) [-7368.509] (-7375.073) * (-7375.132) (-7371.745) [-7374.422] (-7376.605) -- 0:02:28
325000 -- (-7371.920) (-7379.808) [-7376.390] (-7366.727) * [-7370.850] (-7377.831) (-7370.332) (-7381.993) -- 0:02:27
Average standard deviation of split frequencies: 0.014460
326000 -- [-7372.262] (-7388.142) (-7372.284) (-7375.465) * (-7374.041) [-7372.866] (-7377.684) (-7380.191) -- 0:02:26
327000 -- (-7372.400) (-7379.691) [-7373.653] (-7378.683) * [-7374.190] (-7370.981) (-7374.569) (-7378.156) -- 0:02:28
328000 -- (-7373.382) [-7376.162] (-7385.519) (-7380.096) * [-7370.335] (-7374.528) (-7369.240) (-7396.256) -- 0:02:27
329000 -- (-7375.574) (-7375.077) (-7387.986) [-7378.703] * (-7375.035) (-7378.395) [-7369.155] (-7383.095) -- 0:02:26
330000 -- (-7375.905) (-7376.590) [-7377.919] (-7381.296) * (-7371.871) [-7371.427] (-7373.038) (-7379.672) -- 0:02:26
Average standard deviation of split frequencies: 0.014256
331000 -- (-7373.244) [-7378.162] (-7384.191) (-7372.824) * [-7371.335] (-7376.344) (-7376.563) (-7373.994) -- 0:02:25
332000 -- (-7369.456) (-7373.545) [-7373.903] (-7377.669) * [-7370.970] (-7375.275) (-7380.739) (-7373.617) -- 0:02:26
333000 -- (-7372.727) (-7371.474) (-7373.955) [-7370.419] * (-7381.643) (-7374.301) (-7374.944) [-7373.652] -- 0:02:26
334000 -- (-7381.031) [-7379.585] (-7376.594) (-7373.528) * (-7375.787) (-7379.639) (-7378.192) [-7378.960] -- 0:02:25
335000 -- [-7374.349] (-7382.965) (-7377.179) (-7369.237) * (-7380.596) (-7371.300) (-7372.965) [-7370.905] -- 0:02:24
Average standard deviation of split frequencies: 0.013188
336000 -- (-7378.371) (-7377.250) [-7375.212] (-7377.592) * (-7383.670) [-7370.744] (-7374.471) (-7372.001) -- 0:02:26
337000 -- (-7374.312) [-7376.442] (-7385.965) (-7371.669) * [-7372.224] (-7381.549) (-7375.482) (-7375.845) -- 0:02:25
338000 -- (-7373.025) (-7382.441) (-7377.247) [-7367.296] * (-7377.262) (-7380.902) [-7379.723] (-7374.768) -- 0:02:24
339000 -- (-7377.069) (-7385.104) (-7378.095) [-7368.744] * (-7374.035) [-7384.704] (-7379.419) (-7377.470) -- 0:02:24
340000 -- (-7371.334) (-7384.587) [-7369.755] (-7372.369) * (-7369.384) (-7379.364) [-7376.625] (-7379.123) -- 0:02:23
Average standard deviation of split frequencies: 0.013007
341000 -- (-7378.555) (-7389.167) (-7380.739) [-7372.680] * (-7378.631) (-7377.546) (-7377.405) [-7374.827] -- 0:02:24
342000 -- [-7376.720] (-7384.120) (-7374.417) (-7379.235) * [-7372.886] (-7382.165) (-7372.496) (-7373.718) -- 0:02:24
343000 -- (-7371.958) (-7381.779) (-7378.775) [-7366.320] * (-7379.982) (-7389.415) (-7376.802) [-7373.214] -- 0:02:23
344000 -- (-7383.102) (-7372.514) (-7388.004) [-7374.540] * (-7370.072) (-7384.115) [-7377.229] (-7379.368) -- 0:02:23
345000 -- [-7371.476] (-7372.003) (-7375.885) (-7373.382) * [-7373.296] (-7382.454) (-7378.554) (-7373.719) -- 0:02:24
Average standard deviation of split frequencies: 0.013079
346000 -- (-7366.276) (-7380.145) (-7379.072) [-7374.894] * [-7374.829] (-7373.640) (-7380.415) (-7376.507) -- 0:02:23
347000 -- (-7370.539) [-7369.219] (-7377.367) (-7375.522) * (-7379.480) (-7381.089) [-7374.103] (-7378.690) -- 0:02:23
348000 -- (-7373.562) (-7374.743) (-7374.212) [-7376.511] * (-7385.827) (-7375.990) (-7374.431) [-7377.892] -- 0:02:22
349000 -- (-7376.528) [-7373.549] (-7376.089) (-7378.086) * (-7375.660) (-7377.751) (-7386.172) [-7372.600] -- 0:02:21
350000 -- (-7375.651) (-7374.076) [-7374.311] (-7375.801) * (-7382.329) (-7373.382) [-7377.546] (-7374.124) -- 0:02:23
Average standard deviation of split frequencies: 0.013443
351000 -- (-7373.268) [-7373.579] (-7373.295) (-7374.115) * (-7379.888) (-7388.126) (-7371.272) [-7378.181] -- 0:02:22
352000 -- (-7372.749) (-7375.003) (-7372.763) [-7381.519] * (-7372.641) (-7383.035) (-7380.341) [-7380.200] -- 0:02:21
353000 -- (-7384.528) (-7380.876) (-7375.993) [-7373.861] * [-7371.322] (-7377.546) (-7378.365) (-7383.261) -- 0:02:21
354000 -- (-7384.127) (-7372.869) [-7373.153] (-7378.541) * [-7367.236] (-7374.914) (-7371.047) (-7371.426) -- 0:02:22
355000 -- (-7379.308) [-7373.034] (-7379.428) (-7373.572) * (-7378.668) [-7377.232] (-7370.797) (-7372.360) -- 0:02:21
Average standard deviation of split frequencies: 0.013771
356000 -- (-7375.941) (-7381.248) (-7372.241) [-7376.194] * [-7374.179] (-7375.706) (-7376.016) (-7369.230) -- 0:02:21
357000 -- (-7372.276) (-7374.954) [-7371.179] (-7379.791) * [-7366.691] (-7370.656) (-7373.133) (-7372.013) -- 0:02:20
358000 -- [-7374.190] (-7372.388) (-7375.175) (-7381.046) * (-7370.678) (-7377.432) (-7378.842) [-7372.092] -- 0:02:19
359000 -- (-7371.418) (-7369.845) (-7379.725) [-7380.032] * (-7383.341) [-7372.160] (-7379.380) (-7382.112) -- 0:02:21
360000 -- [-7376.831] (-7375.770) (-7381.948) (-7380.381) * (-7378.700) (-7376.981) [-7369.610] (-7373.146) -- 0:02:20
Average standard deviation of split frequencies: 0.013593
361000 -- (-7381.043) (-7378.072) (-7379.958) [-7372.801] * (-7371.329) (-7369.927) [-7383.950] (-7370.255) -- 0:02:19
362000 -- (-7377.962) (-7372.304) (-7377.183) [-7377.128] * (-7374.480) (-7372.479) [-7374.075] (-7373.279) -- 0:02:19
363000 -- (-7376.130) (-7368.425) [-7371.933] (-7380.980) * (-7370.916) (-7372.996) (-7376.114) [-7368.975] -- 0:02:18
364000 -- (-7371.683) [-7367.953] (-7372.709) (-7384.948) * (-7374.340) (-7389.465) [-7374.245] (-7375.675) -- 0:02:19
365000 -- (-7377.251) [-7374.046] (-7373.737) (-7386.837) * (-7384.657) (-7377.824) [-7370.171] (-7381.761) -- 0:02:19
Average standard deviation of split frequencies: 0.013910
366000 -- (-7372.137) [-7373.878] (-7372.021) (-7376.755) * (-7371.225) [-7371.108] (-7372.197) (-7374.454) -- 0:02:18
367000 -- [-7373.924] (-7372.349) (-7379.776) (-7372.085) * (-7373.262) [-7369.870] (-7374.125) (-7373.509) -- 0:02:17
368000 -- [-7376.978] (-7370.434) (-7377.845) (-7368.386) * (-7375.736) (-7373.975) (-7370.636) [-7374.490] -- 0:02:19
369000 -- (-7377.268) (-7377.321) (-7375.597) [-7375.391] * (-7374.850) (-7367.123) [-7367.782] (-7380.781) -- 0:02:18
370000 -- (-7369.408) (-7387.221) (-7369.865) [-7375.094] * [-7377.594] (-7374.533) (-7373.894) (-7384.586) -- 0:02:17
Average standard deviation of split frequencies: 0.013990
371000 -- (-7370.389) [-7372.663] (-7370.047) (-7377.119) * (-7382.290) (-7385.862) (-7372.310) [-7376.575] -- 0:02:17
372000 -- (-7380.048) (-7371.503) [-7377.498] (-7373.540) * [-7377.911] (-7370.388) (-7374.840) (-7371.810) -- 0:02:16
373000 -- (-7376.064) (-7373.246) (-7378.355) [-7376.843] * [-7369.079] (-7371.976) (-7376.998) (-7377.513) -- 0:02:17
374000 -- (-7375.769) (-7372.681) [-7377.458] (-7385.959) * (-7374.733) [-7369.359] (-7377.893) (-7378.807) -- 0:02:17
375000 -- [-7372.885] (-7373.224) (-7377.836) (-7381.350) * [-7371.647] (-7374.926) (-7375.784) (-7372.685) -- 0:02:16
Average standard deviation of split frequencies: 0.015797
376000 -- (-7370.929) (-7376.468) (-7374.863) [-7374.336] * (-7373.938) [-7374.736] (-7377.821) (-7377.281) -- 0:02:16
377000 -- (-7383.789) [-7376.770] (-7371.343) (-7379.589) * (-7378.585) (-7372.014) [-7372.718] (-7377.308) -- 0:02:17
378000 -- (-7372.090) [-7377.749] (-7375.277) (-7370.870) * (-7379.143) (-7369.531) (-7375.381) [-7365.994] -- 0:02:16
379000 -- [-7379.198] (-7369.413) (-7369.212) (-7376.437) * [-7370.471] (-7384.265) (-7379.706) (-7385.008) -- 0:02:15
380000 -- (-7379.742) (-7380.456) [-7370.275] (-7374.203) * (-7381.348) [-7381.236] (-7386.351) (-7378.052) -- 0:02:17
Average standard deviation of split frequencies: 0.015851
381000 -- [-7373.956] (-7377.163) (-7370.726) (-7370.208) * (-7375.632) [-7371.502] (-7376.646) (-7377.822) -- 0:02:16
382000 -- (-7374.367) [-7377.202] (-7373.514) (-7376.369) * [-7372.840] (-7375.383) (-7377.081) (-7379.188) -- 0:02:15
383000 -- (-7382.411) (-7371.963) [-7372.993] (-7376.978) * [-7376.467] (-7374.689) (-7379.758) (-7381.139) -- 0:02:15
384000 -- (-7384.884) (-7372.173) [-7370.099] (-7381.880) * (-7379.570) (-7376.585) [-7372.950] (-7377.435) -- 0:02:14
385000 -- [-7371.480] (-7378.850) (-7370.207) (-7373.399) * (-7369.976) (-7378.980) [-7374.616] (-7381.842) -- 0:02:15
Average standard deviation of split frequencies: 0.018075
386000 -- (-7370.885) [-7380.599] (-7374.051) (-7380.931) * [-7375.157] (-7377.758) (-7377.737) (-7368.030) -- 0:02:15
387000 -- (-7375.607) (-7376.282) [-7374.737] (-7377.745) * (-7379.624) (-7385.332) [-7371.332] (-7379.495) -- 0:02:14
388000 -- (-7383.600) [-7374.005] (-7378.369) (-7375.412) * [-7375.816] (-7374.322) (-7377.374) (-7382.461) -- 0:02:14
389000 -- (-7378.726) (-7371.809) (-7380.231) [-7372.590] * (-7373.682) (-7376.991) [-7373.513] (-7388.222) -- 0:02:13
390000 -- (-7378.103) (-7377.026) (-7383.017) [-7371.281] * (-7375.526) (-7383.971) (-7377.927) [-7378.603] -- 0:02:14
Average standard deviation of split frequencies: 0.016893
391000 -- (-7380.682) (-7371.072) (-7374.757) [-7367.724] * (-7378.969) (-7378.697) (-7376.931) [-7377.100] -- 0:02:13
392000 -- (-7375.373) (-7375.539) (-7373.197) [-7371.676] * (-7377.638) [-7378.300] (-7380.403) (-7381.015) -- 0:02:13
393000 -- [-7376.306] (-7373.961) (-7374.801) (-7377.179) * (-7375.570) [-7377.192] (-7373.066) (-7378.067) -- 0:02:12
394000 -- (-7372.691) (-7383.774) [-7371.729] (-7373.570) * (-7371.964) [-7379.255] (-7374.470) (-7382.703) -- 0:02:13
395000 -- (-7375.614) (-7385.980) (-7371.125) [-7380.844] * [-7371.814] (-7381.718) (-7371.677) (-7378.264) -- 0:02:13
Average standard deviation of split frequencies: 0.016190
396000 -- (-7379.046) (-7380.795) (-7378.845) [-7378.744] * (-7381.746) (-7375.406) [-7375.725] (-7384.711) -- 0:02:12
397000 -- (-7373.248) [-7374.188] (-7379.971) (-7377.571) * (-7374.573) [-7371.268] (-7376.467) (-7378.177) -- 0:02:12
398000 -- (-7377.698) (-7368.821) (-7378.856) [-7368.678] * (-7381.909) (-7379.793) [-7374.114] (-7378.500) -- 0:02:11
399000 -- (-7373.852) (-7370.241) [-7371.916] (-7380.413) * (-7373.557) (-7379.646) (-7368.751) [-7372.368] -- 0:02:12
400000 -- (-7373.577) (-7374.814) (-7376.692) [-7371.504] * (-7380.064) [-7373.002] (-7377.828) (-7371.061) -- 0:02:12
Average standard deviation of split frequencies: 0.016001
401000 -- (-7371.134) [-7375.581] (-7378.281) (-7369.323) * (-7380.455) (-7384.505) (-7373.056) [-7372.561] -- 0:02:11
402000 -- (-7375.352) (-7375.404) (-7369.005) [-7371.729] * (-7377.347) [-7376.893] (-7378.136) (-7372.084) -- 0:02:10
403000 -- [-7374.532] (-7376.260) (-7374.366) (-7380.726) * (-7368.975) [-7369.238] (-7378.964) (-7369.866) -- 0:02:11
404000 -- (-7373.648) [-7373.977] (-7378.333) (-7379.445) * (-7369.956) (-7375.468) [-7374.055] (-7373.312) -- 0:02:11
405000 -- [-7376.593] (-7377.826) (-7375.892) (-7388.848) * (-7380.932) (-7379.066) (-7372.312) [-7366.912] -- 0:02:10
Average standard deviation of split frequencies: 0.016023
406000 -- [-7370.592] (-7376.169) (-7378.295) (-7370.548) * (-7373.105) (-7373.798) [-7372.847] (-7375.245) -- 0:02:10
407000 -- [-7370.371] (-7384.884) (-7380.182) (-7380.890) * (-7374.196) [-7378.480] (-7379.897) (-7374.160) -- 0:02:09
408000 -- [-7367.098] (-7375.263) (-7373.114) (-7383.274) * (-7378.589) (-7370.755) [-7375.220] (-7371.470) -- 0:02:10
409000 -- (-7371.431) (-7369.256) [-7371.127] (-7369.680) * (-7375.681) (-7374.472) [-7373.022] (-7378.785) -- 0:02:10
410000 -- [-7374.043] (-7378.565) (-7380.147) (-7386.078) * (-7377.846) [-7376.099] (-7377.280) (-7374.244) -- 0:02:09
Average standard deviation of split frequencies: 0.014693
411000 -- (-7379.815) (-7372.271) (-7386.866) [-7372.247] * (-7376.826) (-7373.187) (-7377.229) [-7378.144] -- 0:02:08
412000 -- [-7373.156] (-7373.624) (-7373.982) (-7379.548) * (-7373.870) [-7372.963] (-7375.096) (-7369.500) -- 0:02:08
413000 -- (-7382.405) (-7369.878) (-7377.179) [-7374.971] * (-7374.463) (-7373.268) (-7377.640) [-7385.900] -- 0:02:09
414000 -- [-7381.578] (-7379.404) (-7375.170) (-7375.495) * [-7372.802] (-7369.292) (-7376.960) (-7375.305) -- 0:02:08
415000 -- (-7369.830) (-7371.103) (-7386.549) [-7370.766] * (-7367.445) (-7370.533) [-7376.689] (-7376.678) -- 0:02:08
Average standard deviation of split frequencies: 0.012918
416000 -- (-7376.470) [-7370.284] (-7383.750) (-7372.379) * (-7371.104) [-7376.543] (-7375.481) (-7367.379) -- 0:02:07
417000 -- [-7373.447] (-7384.642) (-7378.755) (-7374.302) * (-7373.575) [-7378.619] (-7383.990) (-7369.778) -- 0:02:08
418000 -- (-7370.284) (-7377.696) (-7374.416) [-7371.993] * [-7372.361] (-7379.523) (-7371.959) (-7374.446) -- 0:02:08
419000 -- (-7382.016) (-7369.400) (-7381.799) [-7373.140] * (-7383.081) (-7376.157) (-7381.307) [-7372.406] -- 0:02:07
420000 -- [-7373.680] (-7372.477) (-7376.271) (-7371.210) * (-7371.932) [-7368.998] (-7375.044) (-7380.285) -- 0:02:07
Average standard deviation of split frequencies: 0.015240
421000 -- (-7373.726) (-7380.477) [-7376.283] (-7371.448) * (-7370.686) (-7373.513) (-7380.643) [-7376.227] -- 0:02:06
422000 -- (-7382.658) (-7385.326) [-7372.668] (-7375.283) * (-7375.752) [-7375.022] (-7378.907) (-7370.383) -- 0:02:07
423000 -- (-7381.782) [-7374.673] (-7379.648) (-7378.186) * [-7377.174] (-7372.936) (-7386.357) (-7372.973) -- 0:02:06
424000 -- (-7373.973) (-7378.311) (-7378.209) [-7373.764] * [-7380.791] (-7375.926) (-7380.867) (-7371.163) -- 0:02:06
425000 -- (-7375.147) (-7379.036) (-7381.619) [-7376.700] * (-7379.401) [-7377.704] (-7373.602) (-7384.856) -- 0:02:05
Average standard deviation of split frequencies: 0.015271
426000 -- (-7372.500) (-7382.015) (-7372.255) [-7379.068] * (-7378.664) (-7372.668) [-7373.199] (-7375.250) -- 0:02:06
427000 -- (-7374.023) (-7379.052) [-7375.272] (-7379.604) * (-7384.693) [-7376.871] (-7375.716) (-7369.147) -- 0:02:06
428000 -- (-7377.335) (-7374.495) [-7370.381] (-7375.512) * (-7378.931) [-7373.602] (-7375.198) (-7379.420) -- 0:02:05
429000 -- (-7384.134) (-7375.116) [-7372.601] (-7373.849) * (-7380.883) (-7368.431) (-7380.120) [-7378.264] -- 0:02:05
430000 -- (-7371.789) (-7378.063) [-7375.532] (-7377.666) * (-7374.884) (-7374.926) [-7374.743] (-7377.983) -- 0:02:04
Average standard deviation of split frequencies: 0.015105
431000 -- [-7384.530] (-7380.915) (-7371.485) (-7372.008) * (-7374.476) [-7372.868] (-7375.522) (-7380.843) -- 0:02:05
432000 -- (-7376.844) (-7369.613) [-7375.427] (-7375.950) * (-7377.670) [-7374.245] (-7371.135) (-7378.458) -- 0:02:04
433000 -- [-7366.934] (-7373.258) (-7375.880) (-7373.433) * (-7372.092) (-7375.390) (-7378.889) [-7373.153] -- 0:02:04
434000 -- [-7378.671] (-7381.019) (-7372.635) (-7378.012) * (-7377.939) (-7379.562) [-7377.874] (-7375.903) -- 0:02:03
435000 -- (-7377.453) [-7369.613] (-7372.251) (-7378.573) * [-7382.989] (-7384.187) (-7374.192) (-7375.558) -- 0:02:04
Average standard deviation of split frequencies: 0.014272
436000 -- [-7377.139] (-7377.552) (-7372.273) (-7375.908) * [-7376.045] (-7373.956) (-7377.380) (-7370.354) -- 0:02:04
437000 -- (-7377.904) (-7373.856) [-7374.838] (-7372.556) * [-7367.418] (-7370.474) (-7370.611) (-7377.866) -- 0:02:03
438000 -- (-7379.776) (-7375.337) (-7377.732) [-7371.273] * (-7371.211) [-7370.448] (-7379.463) (-7373.576) -- 0:02:03
439000 -- [-7373.462] (-7369.872) (-7372.668) (-7376.642) * (-7374.100) [-7373.787] (-7386.194) (-7377.236) -- 0:02:02
440000 -- [-7367.384] (-7378.906) (-7378.267) (-7375.901) * (-7373.814) (-7388.191) (-7367.851) [-7376.106] -- 0:02:03
Average standard deviation of split frequencies: 0.013265
441000 -- (-7379.033) (-7379.874) [-7375.558] (-7373.948) * (-7369.807) (-7382.419) (-7375.945) [-7373.633] -- 0:02:02
442000 -- (-7375.420) (-7370.654) (-7376.095) [-7375.023] * (-7377.991) (-7371.942) (-7374.545) [-7370.455] -- 0:02:02
443000 -- [-7376.198] (-7376.292) (-7373.534) (-7369.570) * (-7376.826) (-7376.246) [-7372.228] (-7373.239) -- 0:02:01
444000 -- [-7375.777] (-7372.902) (-7374.091) (-7373.825) * (-7374.701) (-7380.116) (-7376.047) [-7375.937] -- 0:02:02
445000 -- (-7375.878) (-7376.922) [-7376.246] (-7376.897) * (-7383.947) (-7398.707) (-7375.961) [-7380.048] -- 0:02:02
Average standard deviation of split frequencies: 0.013952
446000 -- (-7371.836) (-7375.842) (-7374.931) [-7376.542] * (-7379.106) (-7378.838) [-7380.261] (-7377.174) -- 0:02:01
447000 -- [-7372.554] (-7375.700) (-7379.132) (-7374.652) * (-7379.455) [-7378.026] (-7372.868) (-7379.399) -- 0:02:01
448000 -- (-7373.209) [-7371.090] (-7378.271) (-7372.443) * (-7377.954) (-7371.889) [-7385.165] (-7387.013) -- 0:02:00
449000 -- (-7374.703) (-7377.747) (-7371.180) [-7374.661] * (-7380.899) (-7373.777) [-7380.787] (-7382.729) -- 0:02:01
450000 -- [-7374.377] (-7380.962) (-7368.794) (-7373.558) * [-7379.905] (-7382.988) (-7376.765) (-7375.729) -- 0:02:01
Average standard deviation of split frequencies: 0.012552
451000 -- (-7378.017) (-7376.629) [-7380.407] (-7372.157) * (-7371.800) (-7375.931) [-7366.947] (-7374.176) -- 0:02:00
452000 -- [-7374.434] (-7386.485) (-7373.032) (-7374.057) * (-7370.796) [-7378.768] (-7376.629) (-7376.776) -- 0:02:00
453000 -- (-7380.278) (-7382.170) (-7370.843) [-7366.496] * (-7369.315) [-7371.775] (-7373.341) (-7379.565) -- 0:01:59
454000 -- (-7384.414) (-7372.831) (-7368.695) [-7371.517] * (-7383.033) [-7368.857] (-7386.818) (-7374.434) -- 0:02:00
455000 -- (-7377.896) (-7382.663) (-7373.923) [-7373.404] * (-7379.322) (-7370.150) [-7379.902] (-7384.140) -- 0:01:59
Average standard deviation of split frequencies: 0.014473
456000 -- [-7372.633] (-7372.994) (-7371.818) (-7371.340) * [-7374.325] (-7380.973) (-7374.045) (-7380.654) -- 0:01:59
457000 -- (-7369.544) (-7379.002) (-7378.898) [-7377.512] * [-7369.912] (-7377.082) (-7372.833) (-7381.379) -- 0:01:58
458000 -- (-7380.316) [-7374.408] (-7374.680) (-7377.495) * [-7369.749] (-7375.319) (-7378.131) (-7371.219) -- 0:01:59
459000 -- (-7380.302) (-7387.911) [-7376.691] (-7376.894) * [-7374.249] (-7371.148) (-7387.467) (-7375.399) -- 0:01:59
460000 -- (-7371.130) (-7373.528) (-7378.391) [-7375.599] * [-7373.211] (-7372.616) (-7378.938) (-7379.314) -- 0:01:58
Average standard deviation of split frequencies: 0.015350
461000 -- [-7370.072] (-7372.661) (-7370.490) (-7378.559) * [-7374.772] (-7368.146) (-7387.482) (-7374.520) -- 0:01:58
462000 -- [-7372.035] (-7374.871) (-7376.668) (-7378.369) * (-7383.690) (-7377.784) [-7374.348] (-7369.989) -- 0:01:57
463000 -- (-7374.616) (-7374.217) [-7366.939] (-7379.421) * (-7374.108) (-7371.646) [-7370.711] (-7386.897) -- 0:01:58
464000 -- (-7374.380) (-7376.911) (-7368.586) [-7374.936] * (-7373.270) (-7374.553) [-7368.765] (-7378.812) -- 0:01:57
465000 -- (-7373.525) [-7370.673] (-7371.029) (-7377.225) * [-7381.864] (-7370.494) (-7379.378) (-7373.023) -- 0:01:57
Average standard deviation of split frequencies: 0.013151
466000 -- (-7368.398) [-7377.446] (-7377.194) (-7376.359) * (-7373.648) (-7370.265) (-7372.882) [-7381.367] -- 0:01:56
467000 -- (-7373.824) [-7377.101] (-7379.308) (-7380.306) * (-7373.383) (-7372.480) [-7373.485] (-7369.928) -- 0:01:56
468000 -- (-7372.668) (-7383.552) [-7371.176] (-7381.619) * (-7372.584) (-7375.933) (-7372.197) [-7371.414] -- 0:01:57
469000 -- (-7374.959) (-7383.646) [-7370.436] (-7376.594) * (-7372.213) [-7369.915] (-7377.554) (-7381.922) -- 0:01:56
470000 -- (-7369.744) (-7381.205) (-7374.866) [-7375.744] * (-7374.155) (-7374.753) (-7372.679) [-7374.719] -- 0:01:56
Average standard deviation of split frequencies: 0.013020
471000 -- (-7377.498) (-7381.547) [-7376.471] (-7376.730) * (-7375.976) [-7370.835] (-7379.797) (-7375.831) -- 0:01:55
472000 -- (-7378.369) (-7381.052) (-7388.849) [-7373.755] * [-7375.178] (-7374.614) (-7372.260) (-7378.774) -- 0:01:55
473000 -- [-7387.694] (-7377.439) (-7380.027) (-7377.090) * (-7379.767) (-7369.279) [-7372.607] (-7370.837) -- 0:01:55
474000 -- (-7369.441) (-7381.530) [-7371.355] (-7372.606) * (-7374.074) (-7372.569) (-7377.892) [-7374.308] -- 0:01:55
475000 -- (-7372.511) (-7377.761) (-7373.814) [-7380.688] * [-7373.247] (-7376.855) (-7381.887) (-7375.165) -- 0:01:54
Average standard deviation of split frequencies: 0.010894
476000 -- (-7378.062) (-7382.296) [-7376.602] (-7382.791) * [-7367.302] (-7385.588) (-7373.968) (-7375.663) -- 0:01:54
477000 -- [-7374.964] (-7379.143) (-7373.558) (-7376.092) * [-7369.866] (-7370.519) (-7376.505) (-7372.552) -- 0:01:55
478000 -- (-7370.186) [-7372.952] (-7370.915) (-7376.512) * (-7371.543) (-7374.509) (-7379.905) [-7378.080] -- 0:01:54
479000 -- [-7375.674] (-7383.599) (-7369.173) (-7380.224) * (-7371.158) [-7373.642] (-7375.250) (-7372.060) -- 0:01:54
480000 -- [-7379.086] (-7377.127) (-7395.659) (-7378.792) * (-7379.174) [-7369.915] (-7379.095) (-7382.256) -- 0:01:53
Average standard deviation of split frequencies: 0.010788
481000 -- [-7372.169] (-7373.967) (-7382.780) (-7378.394) * (-7377.260) [-7367.416] (-7382.568) (-7372.309) -- 0:01:53
482000 -- [-7369.318] (-7371.894) (-7373.150) (-7376.477) * [-7375.834] (-7374.218) (-7379.755) (-7375.549) -- 0:01:53
483000 -- [-7369.577] (-7378.643) (-7377.770) (-7376.340) * [-7382.281] (-7372.460) (-7370.384) (-7376.179) -- 0:01:53
484000 -- [-7377.703] (-7376.132) (-7377.994) (-7377.119) * (-7371.922) [-7375.355] (-7370.705) (-7379.708) -- 0:01:53
485000 -- (-7380.003) (-7379.374) [-7374.876] (-7382.188) * (-7372.489) (-7383.732) (-7372.601) [-7371.738] -- 0:01:52
Average standard deviation of split frequencies: 0.010476
486000 -- (-7380.558) [-7380.291] (-7377.392) (-7372.982) * (-7376.891) (-7372.742) (-7376.937) [-7369.065] -- 0:01:52
487000 -- (-7375.082) (-7370.499) [-7371.821] (-7379.634) * [-7371.567] (-7377.664) (-7379.714) (-7377.213) -- 0:01:52
488000 -- (-7384.830) [-7375.387] (-7367.816) (-7375.350) * (-7376.339) [-7378.058] (-7375.043) (-7372.547) -- 0:01:52
489000 -- (-7380.569) [-7373.183] (-7369.212) (-7378.453) * (-7373.392) (-7371.200) (-7375.610) [-7370.920] -- 0:01:51
490000 -- (-7376.843) [-7379.402] (-7375.539) (-7380.835) * (-7380.108) (-7374.406) (-7384.559) [-7370.503] -- 0:01:51
Average standard deviation of split frequencies: 0.011337
491000 -- [-7381.421] (-7379.110) (-7377.395) (-7381.593) * (-7377.797) (-7382.859) [-7378.057] (-7373.522) -- 0:01:51
492000 -- [-7376.811] (-7375.700) (-7382.725) (-7378.254) * (-7374.067) (-7377.346) [-7377.935] (-7385.688) -- 0:01:51
493000 -- (-7373.985) [-7374.438] (-7375.242) (-7373.260) * (-7376.653) (-7375.934) [-7375.889] (-7387.849) -- 0:01:51
494000 -- [-7371.585] (-7378.424) (-7373.693) (-7377.116) * [-7376.349] (-7375.276) (-7384.892) (-7387.037) -- 0:01:50
495000 -- (-7372.932) [-7375.479] (-7376.164) (-7375.370) * (-7383.431) (-7374.783) [-7377.256] (-7385.607) -- 0:01:50
Average standard deviation of split frequencies: 0.012355
496000 -- (-7372.444) (-7376.116) [-7371.028] (-7393.125) * (-7382.463) [-7367.368] (-7375.794) (-7399.393) -- 0:01:50
497000 -- (-7389.112) [-7366.232] (-7381.078) (-7369.479) * [-7368.814] (-7369.501) (-7374.393) (-7380.083) -- 0:01:50
498000 -- (-7392.800) (-7377.795) (-7376.483) [-7372.257] * [-7371.343] (-7377.165) (-7371.623) (-7374.861) -- 0:01:49
499000 -- (-7384.884) [-7375.668] (-7378.129) (-7373.590) * (-7375.368) [-7380.181] (-7377.137) (-7381.142) -- 0:01:49
500000 -- (-7383.749) (-7369.202) [-7375.718] (-7384.630) * [-7371.940] (-7383.204) (-7370.635) (-7372.640) -- 0:01:49
Average standard deviation of split frequencies: 0.012240
501000 -- [-7369.356] (-7378.528) (-7382.319) (-7378.359) * (-7373.573) [-7372.953] (-7375.704) (-7377.002) -- 0:01:49
502000 -- (-7378.506) [-7373.194] (-7374.930) (-7370.027) * (-7376.987) (-7372.421) [-7372.782] (-7370.413) -- 0:01:49
503000 -- [-7379.242] (-7373.910) (-7373.431) (-7380.085) * (-7377.836) (-7373.869) (-7377.608) [-7368.963] -- 0:01:48
504000 -- (-7371.998) [-7372.434] (-7375.641) (-7380.180) * [-7369.874] (-7367.882) (-7376.041) (-7372.577) -- 0:01:48
505000 -- (-7380.920) (-7373.364) (-7374.860) [-7377.395] * (-7375.088) (-7383.230) (-7374.284) [-7376.564] -- 0:01:48
Average standard deviation of split frequencies: 0.011739
506000 -- (-7370.153) (-7375.044) [-7369.720] (-7383.482) * (-7375.013) [-7372.737] (-7378.748) (-7367.811) -- 0:01:48
507000 -- (-7373.939) [-7373.041] (-7371.315) (-7374.801) * (-7375.864) [-7374.647] (-7381.954) (-7371.420) -- 0:01:47
508000 -- (-7382.107) [-7373.046] (-7391.116) (-7373.769) * [-7381.070] (-7385.262) (-7377.700) (-7369.772) -- 0:01:47
509000 -- (-7372.610) [-7374.210] (-7379.722) (-7381.879) * (-7372.416) (-7367.537) (-7384.185) [-7370.294] -- 0:01:47
510000 -- (-7371.205) (-7367.324) (-7374.422) [-7371.155] * (-7379.387) (-7383.280) (-7373.064) [-7377.440] -- 0:01:47
Average standard deviation of split frequencies: 0.012185
511000 -- (-7379.872) (-7378.614) (-7370.487) [-7371.079] * (-7371.450) (-7375.661) [-7370.714] (-7373.783) -- 0:01:47
512000 -- (-7377.995) [-7371.439] (-7378.120) (-7387.433) * [-7370.044] (-7368.560) (-7389.156) (-7377.523) -- 0:01:46
513000 -- [-7382.413] (-7379.522) (-7384.884) (-7373.106) * (-7368.221) [-7373.579] (-7375.448) (-7380.428) -- 0:01:46
514000 -- (-7383.937) [-7372.278] (-7375.229) (-7380.094) * (-7380.135) (-7377.303) (-7373.109) [-7376.580] -- 0:01:45
515000 -- (-7373.224) (-7371.200) [-7372.747] (-7377.973) * (-7378.298) (-7379.047) [-7378.468] (-7366.534) -- 0:01:46
Average standard deviation of split frequencies: 0.012059
516000 -- (-7371.649) (-7382.802) [-7377.206] (-7370.298) * (-7371.967) (-7382.243) [-7375.327] (-7372.145) -- 0:01:45
517000 -- [-7368.560] (-7389.887) (-7369.672) (-7384.469) * (-7379.581) (-7373.964) (-7371.770) [-7377.428] -- 0:01:45
518000 -- (-7373.939) (-7371.458) (-7377.072) [-7371.132] * (-7373.383) (-7371.253) (-7391.035) [-7375.950] -- 0:01:45
519000 -- [-7368.986] (-7374.658) (-7376.559) (-7376.303) * (-7374.558) (-7373.443) [-7372.641] (-7379.056) -- 0:01:45
520000 -- (-7367.251) [-7370.514] (-7380.233) (-7377.371) * (-7372.997) (-7380.809) [-7369.653] (-7385.073) -- 0:01:45
Average standard deviation of split frequencies: 0.011046
521000 -- (-7381.969) [-7371.709] (-7377.484) (-7372.683) * (-7369.332) [-7379.406] (-7371.662) (-7380.007) -- 0:01:44
522000 -- [-7370.030] (-7370.565) (-7379.859) (-7368.419) * (-7370.166) [-7378.764] (-7375.598) (-7377.184) -- 0:01:44
523000 -- (-7371.036) [-7377.063] (-7374.410) (-7374.337) * (-7377.385) (-7370.276) [-7372.145] (-7377.407) -- 0:01:43
524000 -- (-7374.457) (-7381.720) (-7370.030) [-7370.056] * (-7377.061) (-7374.746) (-7377.781) [-7374.841] -- 0:01:44
525000 -- (-7380.747) [-7375.257] (-7382.337) (-7379.241) * [-7375.371] (-7382.240) (-7373.132) (-7368.888) -- 0:01:44
Average standard deviation of split frequencies: 0.011471
526000 -- (-7384.409) [-7381.816] (-7374.763) (-7371.760) * (-7377.740) (-7385.217) (-7380.285) [-7372.823] -- 0:01:43
527000 -- (-7374.995) [-7371.284] (-7371.827) (-7379.381) * (-7381.435) (-7379.531) (-7383.586) [-7375.944] -- 0:01:43
528000 -- [-7372.613] (-7374.118) (-7372.918) (-7375.616) * (-7374.101) (-7376.502) [-7374.569] (-7374.505) -- 0:01:43
529000 -- (-7376.800) (-7369.965) (-7384.383) [-7368.365] * (-7379.579) (-7372.613) (-7380.045) [-7375.674] -- 0:01:43
530000 -- (-7376.988) [-7382.329] (-7372.809) (-7370.426) * (-7389.718) [-7374.542] (-7377.177) (-7380.714) -- 0:01:42
Average standard deviation of split frequencies: 0.010660
531000 -- (-7379.002) [-7370.722] (-7376.075) (-7383.951) * (-7379.726) (-7379.913) [-7372.204] (-7368.053) -- 0:01:42
532000 -- (-7369.032) [-7370.880] (-7377.321) (-7379.966) * (-7377.689) [-7375.288] (-7371.798) (-7375.692) -- 0:01:42
533000 -- [-7377.203] (-7374.328) (-7369.835) (-7373.819) * (-7377.095) (-7378.542) [-7375.423] (-7371.835) -- 0:01:42
534000 -- (-7380.376) (-7373.950) (-7377.695) [-7373.877] * [-7370.283] (-7379.095) (-7367.877) (-7378.768) -- 0:01:42
535000 -- [-7373.289] (-7375.396) (-7376.458) (-7377.332) * (-7377.742) (-7379.565) (-7370.169) [-7368.755] -- 0:01:41
Average standard deviation of split frequencies: 0.011257
536000 -- (-7378.003) [-7378.158] (-7379.752) (-7377.658) * [-7378.330] (-7383.139) (-7379.429) (-7373.008) -- 0:01:41
537000 -- (-7375.944) (-7381.824) (-7370.681) [-7376.406] * [-7370.023] (-7375.525) (-7377.601) (-7386.372) -- 0:01:41
538000 -- (-7372.399) (-7375.382) (-7376.081) [-7374.438] * (-7369.873) (-7381.467) (-7374.061) [-7371.263] -- 0:01:41
539000 -- (-7370.437) (-7384.258) (-7375.856) [-7378.677] * (-7379.726) (-7379.696) (-7376.827) [-7379.002] -- 0:01:40
540000 -- (-7375.147) (-7375.248) [-7373.686] (-7374.046) * [-7373.190] (-7385.654) (-7372.998) (-7380.439) -- 0:01:40
Average standard deviation of split frequencies: 0.010463
541000 -- (-7374.029) (-7371.958) [-7371.307] (-7379.238) * (-7374.017) (-7376.836) [-7370.699] (-7378.012) -- 0:01:40
542000 -- (-7380.991) (-7373.190) [-7374.733] (-7373.838) * [-7374.967] (-7375.623) (-7378.245) (-7377.427) -- 0:01:40
543000 -- [-7370.710] (-7373.832) (-7380.805) (-7375.055) * (-7380.611) [-7370.673] (-7382.179) (-7373.885) -- 0:01:40
544000 -- (-7382.603) (-7378.081) (-7373.802) [-7369.840] * (-7374.028) (-7372.582) (-7377.102) [-7375.758] -- 0:01:39
545000 -- (-7375.174) (-7388.007) (-7372.103) [-7370.221] * (-7376.172) (-7367.853) (-7371.406) [-7373.902] -- 0:01:40
Average standard deviation of split frequencies: 0.010706
546000 -- (-7377.349) [-7371.526] (-7370.913) (-7385.653) * (-7380.411) [-7378.650] (-7371.968) (-7370.121) -- 0:01:39
547000 -- (-7371.653) (-7376.869) (-7372.690) [-7367.614] * (-7378.602) (-7365.370) (-7369.536) [-7367.758] -- 0:01:39
548000 -- (-7375.673) (-7373.615) (-7377.676) [-7371.634] * (-7381.255) (-7374.715) [-7379.233] (-7386.469) -- 0:01:38
549000 -- [-7373.321] (-7378.145) (-7371.361) (-7380.464) * (-7380.938) (-7375.554) (-7371.489) [-7374.811] -- 0:01:38
550000 -- [-7377.784] (-7376.497) (-7377.556) (-7387.312) * (-7374.822) (-7378.462) [-7377.927] (-7372.027) -- 0:01:39
Average standard deviation of split frequencies: 0.011642
551000 -- (-7372.698) (-7381.990) [-7371.861] (-7383.609) * (-7373.019) (-7376.500) [-7378.658] (-7380.084) -- 0:01:38
552000 -- [-7377.434] (-7375.685) (-7378.548) (-7378.625) * (-7378.475) (-7378.399) [-7371.192] (-7385.229) -- 0:01:38
553000 -- (-7374.116) [-7370.720] (-7380.059) (-7374.367) * (-7370.441) (-7379.107) [-7372.024] (-7368.231) -- 0:01:37
554000 -- (-7371.228) (-7375.358) [-7371.233] (-7370.907) * (-7368.539) (-7377.086) (-7386.199) [-7375.858] -- 0:01:38
555000 -- (-7374.919) (-7369.452) (-7372.196) [-7369.146] * (-7376.662) (-7376.771) [-7379.029] (-7380.427) -- 0:01:37
Average standard deviation of split frequencies: 0.010852
556000 -- (-7376.714) (-7375.295) (-7379.928) [-7373.578] * [-7377.039] (-7372.028) (-7381.300) (-7373.440) -- 0:01:37
557000 -- (-7380.914) (-7379.681) [-7374.759] (-7371.078) * [-7371.092] (-7375.613) (-7378.192) (-7374.610) -- 0:01:37
558000 -- (-7375.757) [-7373.079] (-7381.316) (-7381.821) * [-7372.782] (-7373.244) (-7378.082) (-7374.612) -- 0:01:36
559000 -- (-7375.877) [-7375.347] (-7378.573) (-7374.654) * (-7380.376) (-7376.016) [-7378.461] (-7375.633) -- 0:01:37
560000 -- (-7381.010) (-7371.435) [-7369.044] (-7375.059) * (-7381.130) [-7374.950] (-7377.359) (-7368.120) -- 0:01:36
Average standard deviation of split frequencies: 0.010594
561000 -- [-7376.218] (-7376.051) (-7372.578) (-7372.903) * (-7377.278) [-7372.353] (-7381.605) (-7377.882) -- 0:01:36
562000 -- (-7373.520) (-7369.178) (-7369.666) [-7368.576] * (-7377.431) (-7376.901) (-7372.275) [-7370.118] -- 0:01:35
563000 -- (-7370.168) (-7376.521) (-7376.292) [-7370.134] * (-7389.015) [-7377.861] (-7378.279) (-7384.821) -- 0:01:36
564000 -- [-7375.331] (-7379.260) (-7381.510) (-7372.626) * (-7378.526) (-7371.310) [-7371.607] (-7383.576) -- 0:01:35
565000 -- (-7386.024) (-7376.333) (-7372.526) [-7372.687] * (-7376.000) (-7383.329) [-7374.013] (-7371.734) -- 0:01:35
Average standard deviation of split frequencies: 0.010494
566000 -- (-7369.645) (-7378.357) [-7370.794] (-7386.611) * (-7375.122) [-7374.307] (-7372.566) (-7385.899) -- 0:01:35
567000 -- (-7372.484) (-7372.210) [-7377.308] (-7376.178) * (-7369.790) (-7374.919) [-7370.490] (-7370.816) -- 0:01:34
568000 -- (-7372.100) [-7370.226] (-7376.203) (-7382.098) * (-7379.991) (-7374.669) (-7368.664) [-7376.805] -- 0:01:35
569000 -- (-7369.009) (-7379.678) (-7372.933) [-7370.360] * [-7378.948] (-7369.268) (-7383.392) (-7375.175) -- 0:01:34
570000 -- [-7374.249] (-7383.009) (-7380.566) (-7368.556) * [-7372.967] (-7378.292) (-7369.302) (-7377.632) -- 0:01:34
Average standard deviation of split frequencies: 0.010739
571000 -- (-7372.351) (-7370.746) [-7371.764] (-7375.375) * (-7373.995) [-7373.426] (-7376.844) (-7379.294) -- 0:01:33
572000 -- (-7377.197) (-7370.415) [-7369.824] (-7370.714) * [-7375.538] (-7376.428) (-7381.941) (-7380.928) -- 0:01:34
573000 -- (-7378.791) [-7380.940] (-7377.994) (-7374.209) * (-7382.262) (-7374.213) [-7377.802] (-7378.350) -- 0:01:33
574000 -- (-7375.486) (-7373.274) (-7376.540) [-7374.624] * (-7379.614) (-7372.404) (-7379.013) [-7372.236] -- 0:01:33
575000 -- [-7368.773] (-7371.742) (-7374.720) (-7380.183) * (-7383.584) (-7368.070) [-7378.925] (-7373.186) -- 0:01:33
Average standard deviation of split frequencies: 0.011130
576000 -- (-7374.154) (-7370.055) (-7367.771) [-7371.828] * (-7379.020) (-7374.138) [-7375.083] (-7370.578) -- 0:01:32
577000 -- (-7372.860) [-7373.278] (-7377.883) (-7370.553) * (-7377.529) (-7371.690) (-7385.168) [-7371.948] -- 0:01:33
578000 -- (-7371.776) (-7372.822) (-7384.399) [-7372.391] * (-7380.092) (-7376.210) (-7376.870) [-7377.975] -- 0:01:32
579000 -- (-7374.836) [-7372.296] (-7385.649) (-7371.861) * (-7369.416) (-7381.721) [-7375.190] (-7372.809) -- 0:01:32
580000 -- (-7375.352) (-7371.435) (-7375.617) [-7379.597] * [-7373.378] (-7372.219) (-7375.622) (-7383.716) -- 0:01:32
Average standard deviation of split frequencies: 0.011203
581000 -- (-7379.046) (-7375.872) (-7375.218) [-7375.609] * (-7382.603) (-7377.429) [-7376.464] (-7374.290) -- 0:01:32
582000 -- [-7374.380] (-7378.206) (-7373.998) (-7384.020) * [-7372.176] (-7378.994) (-7371.919) (-7371.742) -- 0:01:31
583000 -- [-7379.035] (-7377.307) (-7384.800) (-7371.790) * (-7383.784) [-7371.175] (-7377.100) (-7369.591) -- 0:01:31
584000 -- (-7374.290) (-7381.230) (-7369.989) [-7375.514] * (-7375.446) [-7368.813] (-7377.470) (-7377.302) -- 0:01:31
585000 -- (-7376.009) (-7378.296) (-7375.100) [-7371.294] * (-7373.305) (-7382.887) [-7379.218] (-7375.760) -- 0:01:31
Average standard deviation of split frequencies: 0.010619
586000 -- (-7375.761) (-7390.282) (-7373.457) [-7374.672] * (-7373.605) (-7390.458) (-7375.168) [-7371.438] -- 0:01:31
587000 -- (-7372.319) (-7379.375) [-7372.936] (-7380.275) * [-7378.009] (-7380.625) (-7375.221) (-7375.989) -- 0:01:30
588000 -- (-7376.818) (-7374.409) (-7378.851) [-7373.220] * (-7382.198) [-7371.553] (-7381.691) (-7374.279) -- 0:01:30
589000 -- (-7373.250) [-7375.065] (-7371.815) (-7385.238) * (-7370.302) [-7367.673] (-7374.972) (-7373.705) -- 0:01:30
590000 -- [-7376.717] (-7376.961) (-7378.598) (-7373.774) * (-7386.600) [-7374.233] (-7373.682) (-7372.213) -- 0:01:30
Average standard deviation of split frequencies: 0.009417
591000 -- [-7378.627] (-7376.772) (-7372.152) (-7377.894) * (-7375.231) (-7383.863) [-7378.035] (-7376.160) -- 0:01:29
592000 -- [-7377.986] (-7372.964) (-7369.811) (-7375.468) * [-7378.242] (-7380.919) (-7375.284) (-7372.657) -- 0:01:29
593000 -- (-7380.138) (-7374.780) (-7372.862) [-7368.266] * (-7378.342) [-7376.610] (-7375.636) (-7384.071) -- 0:01:29
594000 -- (-7380.046) [-7377.789] (-7374.307) (-7379.876) * (-7377.814) (-7385.695) (-7375.232) [-7370.765] -- 0:01:29
595000 -- (-7375.495) (-7379.803) [-7371.221] (-7372.464) * [-7375.776] (-7383.413) (-7375.104) (-7373.377) -- 0:01:29
Average standard deviation of split frequencies: 0.008700
596000 -- (-7368.067) (-7372.901) (-7374.005) [-7384.497] * (-7375.851) [-7373.869] (-7376.626) (-7381.581) -- 0:01:28
597000 -- (-7382.852) (-7377.224) [-7379.323] (-7375.397) * (-7373.573) [-7377.807] (-7378.383) (-7377.949) -- 0:01:28
598000 -- (-7385.402) (-7379.304) [-7375.229] (-7379.134) * (-7378.426) [-7376.347] (-7375.039) (-7369.384) -- 0:01:28
599000 -- (-7370.699) (-7386.324) [-7380.555] (-7376.249) * (-7381.400) [-7381.219] (-7378.271) (-7373.230) -- 0:01:28
600000 -- (-7374.477) [-7371.645] (-7378.826) (-7386.362) * [-7376.951] (-7384.325) (-7378.383) (-7372.427) -- 0:01:28
Average standard deviation of split frequencies: 0.008319
601000 -- (-7380.411) (-7373.687) [-7376.291] (-7373.043) * (-7371.343) (-7386.171) [-7368.225] (-7379.758) -- 0:01:27
602000 -- (-7371.257) [-7374.208] (-7377.489) (-7378.329) * (-7370.421) (-7370.063) [-7381.641] (-7379.921) -- 0:01:27
603000 -- (-7370.190) (-7379.827) [-7368.509] (-7374.448) * (-7377.657) (-7372.173) (-7375.345) [-7371.410] -- 0:01:27
604000 -- (-7372.841) (-7371.751) [-7367.667] (-7373.898) * [-7367.262] (-7371.617) (-7374.617) (-7375.198) -- 0:01:27
605000 -- (-7370.873) (-7372.777) [-7375.974] (-7376.338) * (-7369.711) (-7368.815) [-7368.862] (-7377.835) -- 0:01:26
Average standard deviation of split frequencies: 0.007157
606000 -- [-7373.363] (-7382.131) (-7374.832) (-7371.995) * (-7374.547) [-7372.721] (-7379.515) (-7380.018) -- 0:01:26
607000 -- (-7374.454) (-7373.206) (-7371.304) [-7380.211] * [-7371.606] (-7373.197) (-7383.201) (-7379.651) -- 0:01:26
608000 -- (-7377.944) (-7375.696) [-7380.340] (-7377.363) * [-7368.051] (-7370.878) (-7368.213) (-7380.073) -- 0:01:26
609000 -- (-7378.469) (-7376.307) (-7377.413) [-7370.650] * [-7372.972] (-7371.800) (-7377.599) (-7379.484) -- 0:01:26
610000 -- [-7372.955] (-7377.481) (-7374.400) (-7376.864) * [-7375.834] (-7382.644) (-7371.054) (-7378.129) -- 0:01:25
Average standard deviation of split frequencies: 0.007102
611000 -- (-7380.604) (-7378.379) (-7375.208) [-7369.655] * (-7377.842) (-7366.666) [-7378.079] (-7373.018) -- 0:01:25
612000 -- (-7377.350) [-7373.601] (-7377.243) (-7379.693) * (-7375.887) [-7377.876] (-7372.860) (-7373.355) -- 0:01:24
613000 -- (-7369.888) (-7368.830) (-7375.829) [-7370.641] * [-7374.235] (-7371.955) (-7376.538) (-7383.588) -- 0:01:25
614000 -- [-7369.663] (-7375.687) (-7379.228) (-7378.329) * [-7371.582] (-7373.829) (-7376.158) (-7373.990) -- 0:01:24
615000 -- (-7373.215) (-7371.334) (-7380.520) [-7371.201] * (-7376.564) (-7385.301) (-7372.972) [-7375.375] -- 0:01:24
Average standard deviation of split frequencies: 0.007040
616000 -- [-7379.138] (-7374.416) (-7375.034) (-7373.452) * (-7371.405) (-7376.517) [-7378.742] (-7376.032) -- 0:01:24
617000 -- (-7377.206) (-7374.578) (-7372.987) [-7372.235] * [-7373.831] (-7379.200) (-7379.386) (-7387.984) -- 0:01:24
618000 -- (-7370.427) [-7376.504] (-7378.583) (-7381.098) * (-7379.954) [-7373.005] (-7376.506) (-7373.694) -- 0:01:24
619000 -- (-7380.601) [-7374.257] (-7373.712) (-7375.540) * (-7376.257) (-7374.398) [-7378.904] (-7375.771) -- 0:01:23
620000 -- (-7373.645) (-7376.081) (-7376.636) [-7374.212] * (-7368.722) [-7371.153] (-7372.810) (-7377.221) -- 0:01:23
Average standard deviation of split frequencies: 0.007291
621000 -- (-7371.417) (-7378.874) (-7373.607) [-7377.364] * (-7373.629) (-7373.754) (-7386.003) [-7370.138] -- 0:01:23
622000 -- (-7372.869) (-7377.730) (-7374.746) [-7377.765] * [-7371.333] (-7378.160) (-7372.410) (-7379.084) -- 0:01:23
623000 -- (-7370.474) (-7371.743) [-7374.754] (-7371.581) * (-7373.656) [-7380.031] (-7381.601) (-7380.602) -- 0:01:23
624000 -- (-7381.238) (-7372.388) [-7378.822] (-7375.423) * (-7385.888) (-7375.895) (-7374.059) [-7369.568] -- 0:01:23
625000 -- [-7376.286] (-7375.683) (-7383.536) (-7375.485) * (-7372.119) (-7371.977) (-7380.405) [-7371.510] -- 0:01:22
Average standard deviation of split frequencies: 0.007982
626000 -- (-7389.685) [-7371.331] (-7375.190) (-7374.586) * (-7369.995) [-7373.371] (-7369.589) (-7373.253) -- 0:01:22
627000 -- (-7380.110) (-7382.221) [-7371.980] (-7378.343) * [-7375.745] (-7381.195) (-7375.909) (-7375.629) -- 0:01:22
628000 -- (-7373.287) (-7373.463) [-7371.122] (-7375.073) * (-7382.143) [-7375.070] (-7374.449) (-7378.370) -- 0:01:22
629000 -- (-7377.394) (-7375.456) (-7376.567) [-7378.046] * (-7384.262) [-7368.488] (-7380.007) (-7370.228) -- 0:01:21
630000 -- [-7369.422] (-7376.955) (-7370.813) (-7380.384) * [-7376.977] (-7377.708) (-7373.969) (-7371.775) -- 0:01:21
Average standard deviation of split frequencies: 0.007774
631000 -- (-7379.175) (-7379.802) (-7379.006) [-7383.081] * (-7373.881) [-7370.675] (-7375.402) (-7371.943) -- 0:01:21
632000 -- (-7372.732) (-7373.235) [-7374.575] (-7380.867) * (-7377.645) [-7379.418] (-7386.473) (-7376.728) -- 0:01:21
633000 -- [-7374.449] (-7375.921) (-7370.305) (-7381.197) * (-7375.614) (-7379.678) [-7377.454] (-7384.402) -- 0:01:21
634000 -- (-7380.092) (-7374.973) [-7375.100] (-7376.742) * (-7366.634) (-7376.575) (-7373.997) [-7373.436] -- 0:01:20
635000 -- [-7374.808] (-7375.768) (-7378.696) (-7372.390) * (-7382.791) (-7378.120) [-7372.339] (-7369.537) -- 0:01:20
Average standard deviation of split frequencies: 0.007709
636000 -- (-7374.305) (-7384.519) [-7372.990] (-7373.685) * (-7384.636) (-7376.052) (-7374.077) [-7373.037] -- 0:01:20
637000 -- [-7379.218] (-7371.472) (-7374.009) (-7379.259) * (-7383.119) (-7375.811) [-7371.394] (-7378.307) -- 0:01:20
638000 -- [-7371.571] (-7378.000) (-7377.360) (-7369.365) * (-7369.869) (-7374.954) [-7372.248] (-7366.859) -- 0:01:20
639000 -- (-7374.386) [-7378.226] (-7381.092) (-7373.638) * (-7370.847) [-7376.505] (-7374.530) (-7372.752) -- 0:01:19
640000 -- (-7377.191) (-7375.891) [-7373.654] (-7375.992) * (-7375.960) (-7374.782) [-7369.817] (-7378.203) -- 0:01:19
Average standard deviation of split frequencies: 0.007505
641000 -- (-7374.307) (-7374.512) (-7376.242) [-7380.236] * (-7383.510) (-7375.356) [-7374.014] (-7376.057) -- 0:01:19
642000 -- (-7377.754) (-7373.107) (-7378.104) [-7375.207] * (-7379.777) (-7376.147) (-7371.410) [-7370.941] -- 0:01:19
643000 -- (-7379.636) [-7371.478] (-7378.148) (-7377.037) * (-7374.546) [-7373.815] (-7373.846) (-7369.619) -- 0:01:18
644000 -- (-7378.539) (-7372.253) [-7372.450] (-7380.798) * (-7383.863) (-7374.168) [-7377.746] (-7369.672) -- 0:01:18
645000 -- (-7377.647) (-7370.224) [-7372.579] (-7369.874) * (-7378.872) (-7371.831) [-7376.563] (-7374.777) -- 0:01:18
Average standard deviation of split frequencies: 0.007443
646000 -- (-7371.693) (-7372.443) (-7372.179) [-7368.541] * [-7370.281] (-7378.369) (-7380.285) (-7374.615) -- 0:01:18
647000 -- (-7380.415) (-7375.037) (-7374.891) [-7374.013] * (-7376.477) (-7368.638) (-7374.832) [-7375.889] -- 0:01:18
648000 -- [-7377.256] (-7378.475) (-7379.329) (-7377.015) * (-7378.038) (-7373.806) (-7385.028) [-7371.564] -- 0:01:17
649000 -- [-7376.233] (-7379.168) (-7375.870) (-7377.541) * (-7382.143) (-7375.128) [-7375.768] (-7373.312) -- 0:01:17
650000 -- [-7379.357] (-7379.523) (-7372.904) (-7388.263) * (-7371.180) (-7383.163) [-7378.180] (-7378.467) -- 0:01:17
Average standard deviation of split frequencies: 0.007680
651000 -- (-7375.963) (-7372.527) [-7376.091] (-7370.246) * (-7373.396) (-7378.254) [-7371.311] (-7378.676) -- 0:01:17
652000 -- [-7373.198] (-7367.730) (-7371.888) (-7378.221) * (-7379.135) (-7379.831) [-7370.671] (-7378.118) -- 0:01:16
653000 -- [-7381.838] (-7368.116) (-7376.735) (-7367.847) * [-7369.861] (-7385.184) (-7376.333) (-7368.398) -- 0:01:16
654000 -- (-7389.276) (-7374.695) (-7377.455) [-7372.642] * [-7377.560] (-7373.150) (-7373.239) (-7371.748) -- 0:01:16
655000 -- (-7376.050) (-7371.400) [-7372.577] (-7377.467) * (-7374.963) [-7374.123] (-7383.984) (-7373.499) -- 0:01:16
Average standard deviation of split frequencies: 0.008623
656000 -- (-7377.041) [-7369.527] (-7386.591) (-7372.493) * [-7375.024] (-7374.289) (-7372.012) (-7382.328) -- 0:01:16
657000 -- (-7375.274) [-7371.871] (-7379.486) (-7390.002) * (-7379.416) (-7372.648) (-7378.326) [-7375.303] -- 0:01:15
658000 -- (-7380.667) [-7379.324] (-7379.211) (-7389.344) * (-7375.110) (-7382.283) (-7377.817) [-7375.757] -- 0:01:15
659000 -- [-7374.358] (-7377.420) (-7377.160) (-7379.995) * (-7378.880) (-7380.810) [-7374.757] (-7372.762) -- 0:01:15
660000 -- [-7376.957] (-7377.306) (-7376.273) (-7385.067) * (-7383.343) [-7373.621] (-7376.677) (-7372.942) -- 0:01:15
Average standard deviation of split frequencies: 0.008277
661000 -- (-7368.817) [-7373.283] (-7375.460) (-7373.019) * (-7373.521) [-7371.570] (-7384.382) (-7372.002) -- 0:01:14
662000 -- (-7371.144) [-7374.586] (-7370.276) (-7383.645) * (-7381.265) [-7370.685] (-7388.677) (-7372.034) -- 0:01:14
663000 -- (-7379.408) (-7377.535) [-7377.170] (-7379.889) * (-7374.566) (-7387.232) [-7379.090] (-7376.484) -- 0:01:14
664000 -- [-7371.941] (-7378.437) (-7377.835) (-7373.974) * (-7380.355) (-7372.412) (-7383.924) [-7376.581] -- 0:01:14
665000 -- (-7372.875) [-7375.239] (-7378.501) (-7386.949) * [-7387.502] (-7372.499) (-7374.126) (-7374.289) -- 0:01:14
Average standard deviation of split frequencies: 0.008352
666000 -- (-7384.259) (-7377.318) (-7374.829) [-7376.080] * (-7373.755) (-7368.800) (-7372.695) [-7372.821] -- 0:01:13
667000 -- (-7385.527) [-7369.737] (-7381.558) (-7377.272) * (-7371.230) (-7378.723) [-7381.142] (-7376.741) -- 0:01:13
668000 -- (-7375.225) [-7372.746] (-7382.473) (-7376.144) * (-7375.877) (-7376.559) (-7374.889) [-7373.126] -- 0:01:13
669000 -- (-7373.233) (-7377.547) (-7375.328) [-7380.121] * (-7366.767) [-7372.245] (-7373.454) (-7374.880) -- 0:01:13
670000 -- (-7373.492) (-7373.627) (-7377.390) [-7378.608] * (-7376.394) (-7371.924) [-7378.251] (-7381.634) -- 0:01:12
Average standard deviation of split frequencies: 0.007591
671000 -- [-7377.891] (-7366.573) (-7382.149) (-7385.877) * (-7379.862) (-7372.154) [-7374.277] (-7378.824) -- 0:01:12
672000 -- (-7381.278) (-7370.931) [-7372.006] (-7369.298) * (-7369.872) (-7372.554) (-7379.775) [-7378.856] -- 0:01:12
673000 -- (-7390.379) (-7378.784) (-7383.979) [-7376.859] * (-7372.354) (-7375.427) (-7376.784) [-7379.047] -- 0:01:11
674000 -- (-7379.554) [-7373.598] (-7383.115) (-7373.790) * (-7374.869) (-7371.618) [-7377.416] (-7378.008) -- 0:01:12
675000 -- (-7380.483) [-7376.771] (-7378.225) (-7382.898) * (-7372.855) (-7375.261) (-7380.066) [-7374.656] -- 0:01:11
Average standard deviation of split frequencies: 0.007671
676000 -- (-7372.884) [-7367.843] (-7394.275) (-7381.170) * [-7374.311] (-7369.133) (-7381.432) (-7374.074) -- 0:01:11
677000 -- [-7375.342] (-7377.581) (-7381.128) (-7373.552) * [-7370.357] (-7377.756) (-7376.336) (-7377.844) -- 0:01:11
678000 -- (-7376.640) (-7379.531) [-7375.217] (-7378.266) * (-7374.216) (-7370.875) (-7383.429) [-7371.447] -- 0:01:11
679000 -- (-7376.039) [-7370.325] (-7386.481) (-7377.659) * (-7385.658) [-7369.081] (-7378.686) (-7378.730) -- 0:01:10
680000 -- (-7379.414) (-7381.097) (-7379.353) [-7380.043] * [-7376.154] (-7374.131) (-7374.517) (-7387.983) -- 0:01:10
Average standard deviation of split frequencies: 0.006649
681000 -- (-7375.301) (-7372.083) (-7372.791) [-7374.919] * (-7367.622) (-7375.454) (-7382.027) [-7378.343] -- 0:01:10
682000 -- [-7369.525] (-7381.554) (-7379.615) (-7371.207) * (-7376.356) [-7377.795] (-7379.738) (-7378.687) -- 0:01:09
683000 -- (-7375.104) [-7370.819] (-7381.776) (-7378.399) * (-7376.743) [-7370.859] (-7383.960) (-7378.170) -- 0:01:10
684000 -- (-7375.315) [-7374.310] (-7379.165) (-7388.938) * (-7375.133) [-7373.296] (-7378.279) (-7374.754) -- 0:01:09
685000 -- [-7373.678] (-7377.231) (-7378.833) (-7384.079) * (-7374.197) [-7372.254] (-7383.317) (-7376.927) -- 0:01:09
Average standard deviation of split frequencies: 0.007284
686000 -- (-7380.000) (-7373.379) [-7376.977] (-7372.353) * [-7367.793] (-7378.478) (-7378.364) (-7372.209) -- 0:01:09
687000 -- (-7377.106) [-7377.851] (-7379.541) (-7380.508) * (-7371.457) [-7375.822] (-7375.494) (-7372.956) -- 0:01:08
688000 -- [-7378.776] (-7372.949) (-7377.558) (-7375.260) * (-7373.839) (-7370.828) [-7370.527] (-7378.690) -- 0:01:08
689000 -- (-7380.447) [-7372.443] (-7381.661) (-7377.445) * (-7372.344) [-7376.489] (-7371.051) (-7373.601) -- 0:01:08
690000 -- (-7375.533) (-7373.869) (-7376.899) [-7378.972] * (-7377.117) (-7373.447) [-7370.461] (-7373.813) -- 0:01:08
Average standard deviation of split frequencies: 0.009419
691000 -- (-7370.429) (-7387.017) [-7375.063] (-7379.112) * (-7377.490) (-7380.009) (-7376.261) [-7369.692] -- 0:01:07
692000 -- (-7376.445) (-7378.986) (-7375.485) [-7373.734] * (-7373.898) (-7383.871) [-7373.892] (-7372.645) -- 0:01:08
693000 -- (-7372.093) (-7378.848) (-7370.943) [-7373.561] * (-7378.747) [-7374.653] (-7374.448) (-7371.426) -- 0:01:07
694000 -- [-7372.457] (-7377.683) (-7371.055) (-7369.127) * (-7373.440) (-7374.303) (-7384.286) [-7369.868] -- 0:01:07
695000 -- (-7371.685) (-7385.151) (-7370.364) [-7376.624] * (-7371.748) (-7373.115) (-7377.973) [-7376.163] -- 0:01:07
Average standard deviation of split frequencies: 0.009076
696000 -- (-7376.958) (-7374.498) [-7384.377] (-7377.104) * [-7367.897] (-7372.641) (-7382.868) (-7375.761) -- 0:01:06
697000 -- (-7391.510) (-7372.168) (-7377.707) [-7368.548] * (-7377.572) [-7372.593] (-7382.436) (-7368.820) -- 0:01:06
698000 -- (-7376.943) [-7374.625] (-7385.984) (-7375.635) * (-7374.963) [-7379.084] (-7375.716) (-7372.206) -- 0:01:06
699000 -- (-7372.857) (-7378.018) [-7372.306] (-7374.157) * [-7373.105] (-7378.131) (-7378.764) (-7381.459) -- 0:01:06
700000 -- [-7369.708] (-7374.603) (-7372.873) (-7367.844) * (-7371.256) (-7378.970) (-7373.400) [-7374.284] -- 0:01:06
Average standard deviation of split frequencies: 0.009150
701000 -- [-7372.927] (-7377.049) (-7376.324) (-7383.574) * (-7376.251) (-7388.715) (-7371.599) [-7374.138] -- 0:01:06
702000 -- (-7377.556) [-7371.483] (-7374.490) (-7378.503) * (-7371.544) (-7377.635) [-7375.188] (-7371.481) -- 0:01:05
703000 -- [-7371.296] (-7369.036) (-7382.371) (-7378.618) * (-7379.135) [-7376.690] (-7377.863) (-7370.715) -- 0:01:05
704000 -- (-7378.898) (-7372.555) [-7372.818] (-7375.365) * (-7373.284) (-7377.111) (-7371.056) [-7371.838] -- 0:01:05
705000 -- (-7374.597) (-7379.153) [-7367.608] (-7367.194) * [-7371.163] (-7372.346) (-7375.856) (-7374.599) -- 0:01:05
Average standard deviation of split frequencies: 0.009348
706000 -- (-7377.186) [-7370.597] (-7373.289) (-7377.015) * (-7376.100) [-7371.997] (-7373.123) (-7372.592) -- 0:01:04
707000 -- (-7379.472) (-7385.950) (-7374.509) [-7373.584] * (-7370.287) (-7378.752) (-7373.832) [-7377.107] -- 0:01:04
708000 -- (-7378.678) [-7369.135] (-7372.681) (-7377.032) * [-7380.496] (-7378.500) (-7373.919) (-7374.434) -- 0:01:04
709000 -- (-7373.438) (-7373.120) (-7383.117) [-7377.742] * (-7372.271) (-7378.267) (-7369.821) [-7378.642] -- 0:01:04
710000 -- (-7376.996) (-7374.241) [-7369.124] (-7371.631) * (-7389.515) [-7381.372] (-7377.969) (-7376.548) -- 0:01:04
Average standard deviation of split frequencies: 0.008491
711000 -- (-7378.522) [-7383.674] (-7369.795) (-7375.894) * (-7380.521) [-7374.471] (-7381.039) (-7378.716) -- 0:01:03
712000 -- [-7370.119] (-7378.363) (-7374.467) (-7375.383) * (-7377.296) (-7378.497) (-7383.619) [-7366.884] -- 0:01:03
713000 -- (-7375.811) (-7370.177) [-7374.590] (-7376.296) * (-7375.968) (-7388.215) (-7373.216) [-7371.129] -- 0:01:03
714000 -- (-7387.058) (-7387.359) [-7371.077] (-7377.809) * (-7375.489) [-7369.775] (-7369.814) (-7386.158) -- 0:01:02
715000 -- (-7380.644) (-7380.660) [-7368.358] (-7378.208) * [-7377.258] (-7373.854) (-7379.210) (-7376.966) -- 0:01:02
Average standard deviation of split frequencies: 0.008427
716000 -- (-7373.789) (-7383.810) (-7371.014) [-7382.785] * [-7377.402] (-7365.762) (-7371.866) (-7378.590) -- 0:01:02
717000 -- (-7371.497) (-7377.756) (-7386.448) [-7374.679] * (-7381.089) (-7374.448) (-7383.729) [-7380.502] -- 0:01:02
718000 -- [-7371.929] (-7369.853) (-7374.506) (-7373.118) * (-7384.672) [-7376.379] (-7372.839) (-7379.311) -- 0:01:02
719000 -- (-7371.902) (-7382.697) (-7369.172) [-7369.854] * (-7380.082) (-7383.978) [-7375.122] (-7378.706) -- 0:01:01
720000 -- [-7371.499] (-7368.176) (-7370.954) (-7382.467) * [-7379.030] (-7372.095) (-7376.031) (-7372.364) -- 0:01:01
Average standard deviation of split frequencies: 0.007849
721000 -- (-7375.629) (-7372.967) [-7373.011] (-7374.150) * (-7375.141) (-7378.458) [-7379.241] (-7379.683) -- 0:01:01
722000 -- (-7378.996) (-7377.024) (-7380.970) [-7371.862] * (-7378.163) (-7373.968) (-7376.719) [-7382.154] -- 0:01:01
723000 -- (-7373.891) (-7378.938) (-7370.274) [-7376.982] * [-7369.462] (-7370.327) (-7371.995) (-7376.938) -- 0:01:00
724000 -- [-7377.365] (-7367.147) (-7379.496) (-7381.770) * (-7378.538) (-7371.058) (-7380.927) [-7372.708] -- 0:01:00
725000 -- (-7376.678) (-7377.409) (-7373.114) [-7372.539] * [-7371.361] (-7385.524) (-7373.689) (-7374.295) -- 0:01:00
Average standard deviation of split frequencies: 0.007532
726000 -- (-7379.052) (-7373.927) [-7374.901] (-7381.784) * (-7377.912) (-7369.226) (-7375.950) [-7372.428] -- 0:01:00
727000 -- [-7378.652] (-7389.110) (-7377.128) (-7375.837) * (-7372.482) (-7378.247) (-7383.186) [-7368.837] -- 0:01:00
728000 -- (-7373.866) (-7386.142) (-7376.475) [-7372.118] * (-7373.651) (-7367.644) (-7379.531) [-7378.983] -- 0:00:59
729000 -- (-7377.921) (-7377.236) (-7383.947) [-7374.848] * (-7377.643) [-7371.518] (-7380.135) (-7374.179) -- 0:00:59
730000 -- (-7376.688) (-7375.174) [-7368.470] (-7384.437) * (-7378.383) [-7374.656] (-7367.259) (-7377.149) -- 0:00:59
Average standard deviation of split frequencies: 0.007484
731000 -- (-7378.968) (-7369.254) [-7368.477] (-7386.753) * (-7378.552) (-7372.273) [-7370.141] (-7370.668) -- 0:00:59
732000 -- (-7371.649) [-7374.489] (-7374.247) (-7382.126) * [-7369.062] (-7378.059) (-7375.072) (-7374.525) -- 0:00:58
733000 -- (-7369.377) (-7375.053) [-7374.524] (-7378.514) * [-7371.003] (-7376.494) (-7383.607) (-7377.674) -- 0:00:59
734000 -- (-7375.872) (-7374.457) (-7374.582) [-7378.580] * (-7375.714) [-7370.946] (-7382.420) (-7371.541) -- 0:00:58
735000 -- (-7375.228) (-7370.017) (-7384.258) [-7371.896] * (-7382.888) (-7368.992) (-7377.671) [-7371.908] -- 0:00:58
Average standard deviation of split frequencies: 0.007814
736000 -- [-7373.688] (-7377.405) (-7382.157) (-7372.990) * (-7367.862) [-7373.015] (-7382.625) (-7381.143) -- 0:00:58
737000 -- (-7375.177) (-7381.702) [-7375.113] (-7375.598) * (-7367.683) (-7372.995) (-7378.816) [-7380.696] -- 0:00:57
738000 -- [-7372.444] (-7373.141) (-7375.001) (-7373.809) * (-7378.781) (-7382.732) (-7370.086) [-7373.260] -- 0:00:57
739000 -- (-7370.366) (-7380.674) (-7372.668) [-7376.167] * (-7368.905) (-7384.247) [-7375.763] (-7372.204) -- 0:00:57
740000 -- [-7369.241] (-7383.871) (-7375.934) (-7370.730) * (-7374.871) (-7383.425) (-7371.785) [-7377.990] -- 0:00:57
Average standard deviation of split frequencies: 0.008783
741000 -- (-7374.053) (-7376.732) [-7370.586] (-7369.303) * (-7376.167) (-7379.335) [-7370.039] (-7376.669) -- 0:00:56
742000 -- (-7376.304) (-7375.575) (-7375.325) [-7372.263] * (-7380.382) (-7375.669) [-7371.890] (-7378.216) -- 0:00:56
743000 -- [-7369.433] (-7377.855) (-7372.765) (-7376.935) * (-7376.936) (-7378.804) [-7375.496] (-7379.066) -- 0:00:56
744000 -- [-7376.550] (-7374.553) (-7370.752) (-7386.461) * (-7375.364) [-7379.611] (-7382.293) (-7378.118) -- 0:00:56
745000 -- (-7371.654) (-7378.043) [-7372.693] (-7370.886) * (-7376.569) (-7375.279) [-7375.311] (-7377.196) -- 0:00:56
Average standard deviation of split frequencies: 0.009099
746000 -- (-7374.941) (-7375.699) (-7380.392) [-7369.634] * (-7374.897) (-7375.483) (-7370.121) [-7372.670] -- 0:00:55
747000 -- (-7372.196) (-7377.574) [-7374.536] (-7375.830) * (-7376.331) (-7377.822) (-7384.150) [-7372.499] -- 0:00:55
748000 -- (-7375.937) [-7375.567] (-7370.086) (-7375.255) * (-7373.334) [-7369.177] (-7376.713) (-7369.230) -- 0:00:55
749000 -- (-7376.512) (-7384.045) [-7377.121] (-7374.385) * (-7372.596) (-7373.690) (-7386.534) [-7377.218] -- 0:00:55
750000 -- [-7377.131] (-7377.794) (-7381.585) (-7376.895) * [-7373.889] (-7382.826) (-7372.934) (-7376.641) -- 0:00:55
Average standard deviation of split frequencies: 0.008917
751000 -- [-7382.346] (-7380.824) (-7380.123) (-7370.740) * (-7371.914) (-7377.988) [-7370.705] (-7376.598) -- 0:00:54
752000 -- [-7384.611] (-7379.660) (-7382.438) (-7379.285) * (-7381.737) (-7380.247) [-7372.218] (-7374.149) -- 0:00:54
753000 -- (-7375.443) [-7375.477] (-7368.976) (-7377.214) * [-7383.469] (-7371.602) (-7377.059) (-7384.993) -- 0:00:54
754000 -- (-7379.653) [-7373.161] (-7379.885) (-7374.113) * [-7377.672] (-7371.473) (-7373.693) (-7383.328) -- 0:00:54
755000 -- [-7384.955] (-7370.161) (-7379.106) (-7382.667) * (-7386.712) [-7370.253] (-7378.520) (-7377.574) -- 0:00:53
Average standard deviation of split frequencies: 0.008730
756000 -- (-7378.016) (-7372.935) (-7375.740) [-7372.494] * (-7383.381) [-7370.448] (-7376.776) (-7368.325) -- 0:00:53
757000 -- [-7376.965] (-7374.115) (-7375.809) (-7368.654) * (-7382.101) [-7373.175] (-7368.554) (-7374.441) -- 0:00:53
758000 -- [-7375.976] (-7371.323) (-7374.805) (-7376.606) * (-7379.839) [-7371.057] (-7377.383) (-7372.406) -- 0:00:53
759000 -- (-7376.073) (-7370.457) (-7371.655) [-7374.799] * (-7381.267) (-7374.746) [-7375.155] (-7373.975) -- 0:00:53
760000 -- (-7380.310) (-7384.890) [-7380.558] (-7370.137) * [-7368.142] (-7373.230) (-7387.733) (-7371.842) -- 0:00:52
Average standard deviation of split frequencies: 0.010040
761000 -- (-7379.018) [-7366.237] (-7373.173) (-7380.323) * (-7373.208) [-7378.736] (-7390.113) (-7378.789) -- 0:00:52
762000 -- [-7372.192] (-7377.250) (-7372.935) (-7373.607) * [-7372.913] (-7374.539) (-7383.269) (-7372.849) -- 0:00:52
763000 -- (-7372.994) (-7379.302) [-7372.343] (-7376.439) * (-7376.861) (-7377.257) [-7372.709] (-7377.583) -- 0:00:52
764000 -- [-7376.973] (-7382.744) (-7380.101) (-7374.864) * (-7375.735) (-7382.048) [-7370.302] (-7373.935) -- 0:00:51
765000 -- [-7372.269] (-7370.411) (-7373.507) (-7380.671) * (-7376.128) (-7384.788) (-7378.598) [-7378.230] -- 0:00:51
Average standard deviation of split frequencies: 0.010339
766000 -- (-7373.872) [-7372.677] (-7372.300) (-7374.315) * (-7372.888) (-7379.986) (-7379.403) [-7378.859] -- 0:00:51
767000 -- [-7377.632] (-7380.012) (-7372.639) (-7372.506) * (-7373.478) (-7370.578) (-7379.934) [-7376.523] -- 0:00:51
768000 -- (-7385.050) (-7377.304) [-7379.202] (-7381.640) * (-7373.710) (-7371.181) (-7371.730) [-7377.100] -- 0:00:51
769000 -- (-7374.125) [-7378.937] (-7371.441) (-7370.288) * (-7368.612) [-7375.414] (-7382.626) (-7372.691) -- 0:00:50
770000 -- (-7379.377) [-7372.197] (-7382.930) (-7370.961) * (-7375.940) [-7376.941] (-7379.586) (-7373.567) -- 0:00:50
Average standard deviation of split frequencies: 0.011010
771000 -- (-7373.620) (-7379.598) (-7378.763) [-7370.144] * (-7378.138) (-7372.196) [-7375.953] (-7370.122) -- 0:00:50
772000 -- (-7373.113) (-7373.244) (-7374.545) [-7375.490] * (-7369.219) (-7377.165) (-7374.409) [-7382.545] -- 0:00:50
773000 -- [-7368.650] (-7372.912) (-7372.783) (-7379.488) * (-7371.261) (-7373.310) (-7374.228) [-7373.781] -- 0:00:49
774000 -- [-7373.747] (-7373.892) (-7368.288) (-7373.282) * (-7379.074) (-7380.059) [-7369.896] (-7376.357) -- 0:00:49
775000 -- (-7379.017) (-7372.309) (-7373.607) [-7369.308] * (-7371.494) (-7392.667) (-7376.196) [-7371.969] -- 0:00:49
Average standard deviation of split frequencies: 0.010935
776000 -- [-7370.012] (-7371.842) (-7384.231) (-7375.457) * [-7371.081] (-7381.250) (-7371.818) (-7377.189) -- 0:00:49
777000 -- (-7376.613) [-7373.712] (-7376.649) (-7376.315) * [-7378.132] (-7374.833) (-7373.113) (-7375.048) -- 0:00:49
778000 -- [-7376.364] (-7378.021) (-7378.750) (-7379.618) * (-7378.064) [-7376.778] (-7370.056) (-7379.012) -- 0:00:48
779000 -- [-7374.747] (-7378.485) (-7380.473) (-7377.511) * (-7380.426) (-7380.765) [-7370.691] (-7372.752) -- 0:00:48
780000 -- [-7373.835] (-7378.269) (-7370.262) (-7381.674) * (-7383.766) (-7378.840) (-7373.435) [-7374.949] -- 0:00:48
Average standard deviation of split frequencies: 0.011352
781000 -- (-7391.537) (-7372.207) [-7370.126] (-7376.468) * (-7372.342) (-7370.455) [-7375.153] (-7371.278) -- 0:00:48
782000 -- [-7373.118] (-7382.438) (-7372.641) (-7378.215) * (-7371.268) [-7369.837] (-7384.515) (-7384.361) -- 0:00:47
783000 -- (-7367.703) [-7378.290] (-7369.911) (-7371.543) * (-7376.575) (-7371.439) (-7374.736) [-7376.916] -- 0:00:47
784000 -- [-7373.452] (-7376.408) (-7374.555) (-7375.271) * [-7377.815] (-7373.455) (-7384.001) (-7377.976) -- 0:00:47
785000 -- (-7372.432) (-7376.524) [-7378.439] (-7376.569) * [-7374.314] (-7371.698) (-7375.939) (-7380.099) -- 0:00:47
Average standard deviation of split frequencies: 0.011755
786000 -- [-7366.555] (-7375.117) (-7373.491) (-7369.457) * (-7371.492) [-7378.598] (-7378.556) (-7374.729) -- 0:00:47
787000 -- (-7372.938) [-7369.943] (-7378.364) (-7369.626) * (-7370.820) (-7380.704) [-7378.671] (-7370.135) -- 0:00:46
788000 -- [-7373.402] (-7377.605) (-7369.948) (-7371.711) * (-7376.051) (-7371.643) (-7373.407) [-7375.492] -- 0:00:46
789000 -- (-7379.401) (-7370.431) [-7378.712] (-7374.641) * [-7369.799] (-7375.672) (-7370.570) (-7377.238) -- 0:00:46
790000 -- [-7373.633] (-7370.080) (-7376.894) (-7372.502) * [-7375.159] (-7372.145) (-7379.777) (-7379.951) -- 0:00:46
Average standard deviation of split frequencies: 0.012282
791000 -- (-7376.113) (-7383.449) [-7378.341] (-7374.239) * (-7373.909) [-7373.128] (-7382.089) (-7382.301) -- 0:00:45
792000 -- (-7374.547) (-7378.022) (-7366.539) [-7370.082] * (-7374.921) [-7369.496] (-7383.551) (-7384.660) -- 0:00:45
793000 -- [-7377.674] (-7375.773) (-7379.225) (-7375.463) * (-7387.446) (-7376.177) [-7374.809] (-7373.717) -- 0:00:45
794000 -- [-7372.219] (-7374.958) (-7377.323) (-7374.686) * [-7370.706] (-7377.203) (-7377.134) (-7381.721) -- 0:00:45
795000 -- (-7375.670) (-7376.358) [-7378.662] (-7376.933) * (-7369.849) [-7377.487] (-7382.355) (-7381.702) -- 0:00:45
Average standard deviation of split frequencies: 0.012792
796000 -- [-7375.138] (-7383.075) (-7377.999) (-7375.311) * (-7372.770) (-7374.610) [-7382.483] (-7388.335) -- 0:00:44
797000 -- (-7376.569) (-7367.669) (-7381.497) [-7368.428] * [-7369.003] (-7372.117) (-7381.864) (-7374.034) -- 0:00:44
798000 -- [-7374.696] (-7375.231) (-7374.424) (-7374.190) * (-7385.391) (-7380.032) [-7369.709] (-7385.463) -- 0:00:44
799000 -- (-7381.679) (-7383.449) [-7376.239] (-7376.873) * [-7378.752] (-7375.672) (-7373.468) (-7382.345) -- 0:00:44
800000 -- (-7372.853) [-7368.401] (-7380.462) (-7370.556) * (-7382.261) (-7374.246) [-7377.461] (-7376.726) -- 0:00:44
Average standard deviation of split frequencies: 0.011893
801000 -- (-7380.454) (-7373.722) [-7373.517] (-7373.712) * [-7377.508] (-7370.225) (-7372.214) (-7370.636) -- 0:00:43
802000 -- (-7380.646) (-7374.052) [-7376.644] (-7371.137) * (-7384.407) (-7368.765) [-7372.145] (-7373.524) -- 0:00:43
803000 -- (-7376.865) (-7374.910) [-7372.668] (-7377.450) * (-7367.714) (-7383.324) (-7374.083) [-7371.068] -- 0:00:43
804000 -- (-7376.463) [-7377.156] (-7375.382) (-7376.196) * (-7385.172) (-7371.308) (-7375.874) [-7373.068] -- 0:00:43
805000 -- (-7378.393) (-7374.316) [-7379.069] (-7380.785) * (-7381.440) (-7376.990) (-7373.913) [-7371.813] -- 0:00:42
Average standard deviation of split frequencies: 0.011113
806000 -- (-7369.650) [-7373.461] (-7375.454) (-7371.596) * (-7376.190) (-7372.218) (-7382.156) [-7381.705] -- 0:00:42
807000 -- (-7373.097) [-7380.817] (-7379.218) (-7382.065) * [-7371.863] (-7368.639) (-7375.947) (-7377.404) -- 0:00:42
808000 -- (-7383.381) (-7375.776) [-7373.969] (-7370.320) * (-7378.133) [-7377.614] (-7378.073) (-7378.809) -- 0:00:42
809000 -- (-7371.217) [-7373.815] (-7379.620) (-7373.259) * (-7383.967) (-7378.324) (-7377.603) [-7381.614] -- 0:00:42
810000 -- [-7371.332] (-7375.677) (-7369.179) (-7377.636) * (-7379.429) (-7378.513) (-7372.844) [-7375.272] -- 0:00:41
Average standard deviation of split frequencies: 0.010932
811000 -- (-7379.198) (-7374.920) (-7370.754) [-7374.645] * (-7379.179) (-7376.712) (-7372.357) [-7376.644] -- 0:00:41
812000 -- (-7373.087) [-7372.098] (-7371.278) (-7380.924) * (-7377.301) (-7372.453) [-7374.401] (-7377.980) -- 0:00:41
813000 -- (-7372.489) (-7374.058) [-7375.818] (-7375.205) * (-7378.488) (-7367.007) [-7369.014] (-7373.225) -- 0:00:41
814000 -- [-7381.884] (-7373.636) (-7378.285) (-7372.880) * [-7378.262] (-7374.351) (-7385.719) (-7387.976) -- 0:00:40
815000 -- (-7374.912) (-7369.642) [-7369.213] (-7381.147) * [-7373.752] (-7379.307) (-7382.636) (-7377.703) -- 0:00:40
Average standard deviation of split frequencies: 0.011554
816000 -- [-7374.672] (-7374.609) (-7375.289) (-7380.475) * (-7370.947) [-7376.466] (-7372.636) (-7373.959) -- 0:00:40
817000 -- (-7381.796) (-7371.825) (-7369.305) [-7373.591] * (-7379.701) [-7378.455] (-7376.479) (-7377.046) -- 0:00:40
818000 -- (-7371.587) (-7368.993) [-7374.745] (-7382.573) * (-7374.018) [-7372.052] (-7375.059) (-7373.576) -- 0:00:40
819000 -- [-7372.839] (-7380.317) (-7378.711) (-7373.441) * [-7376.315] (-7380.281) (-7385.835) (-7383.996) -- 0:00:39
820000 -- [-7371.208] (-7376.639) (-7378.124) (-7369.309) * (-7370.291) [-7375.175] (-7376.668) (-7374.247) -- 0:00:39
Average standard deviation of split frequencies: 0.010914
821000 -- (-7380.844) (-7380.683) [-7372.065] (-7374.811) * [-7373.543] (-7368.898) (-7382.671) (-7379.220) -- 0:00:39
822000 -- [-7377.861] (-7373.333) (-7368.747) (-7385.039) * (-7378.075) (-7374.366) (-7372.352) [-7373.145] -- 0:00:39
823000 -- (-7382.020) [-7377.937] (-7369.886) (-7385.359) * (-7382.120) [-7371.015] (-7378.326) (-7377.119) -- 0:00:38
824000 -- (-7381.497) (-7374.402) [-7372.085] (-7380.997) * (-7378.475) (-7376.297) [-7378.473] (-7375.887) -- 0:00:38
825000 -- (-7375.333) [-7371.322] (-7385.804) (-7383.758) * (-7376.203) (-7384.906) (-7374.546) [-7373.788] -- 0:00:38
Average standard deviation of split frequencies: 0.010044
826000 -- [-7371.462] (-7378.272) (-7383.041) (-7375.566) * (-7369.798) [-7375.871] (-7371.598) (-7386.669) -- 0:00:38
827000 -- (-7369.664) (-7376.546) [-7369.410] (-7377.163) * [-7368.921] (-7369.712) (-7376.063) (-7377.742) -- 0:00:38
828000 -- (-7371.691) (-7372.690) (-7373.508) [-7370.996] * (-7378.946) (-7377.327) (-7374.792) [-7370.568] -- 0:00:37
829000 -- (-7369.975) (-7372.586) [-7376.320] (-7370.050) * (-7376.194) (-7383.168) [-7374.977] (-7369.511) -- 0:00:37
830000 -- (-7378.627) (-7374.381) (-7380.082) [-7372.660] * (-7372.338) (-7383.156) [-7379.501] (-7374.045) -- 0:00:37
Average standard deviation of split frequencies: 0.009875
831000 -- [-7371.995] (-7374.082) (-7377.903) (-7377.038) * (-7377.200) [-7385.697] (-7373.258) (-7375.281) -- 0:00:37
832000 -- (-7377.037) (-7374.012) (-7372.814) [-7378.250] * (-7375.681) (-7390.590) (-7369.079) [-7370.718] -- 0:00:36
833000 -- (-7373.346) [-7377.786] (-7380.467) (-7380.472) * [-7372.570] (-7370.482) (-7379.101) (-7375.031) -- 0:00:36
834000 -- [-7379.157] (-7380.163) (-7384.228) (-7377.715) * (-7370.793) (-7371.037) (-7374.303) [-7371.626] -- 0:00:36
835000 -- (-7371.986) (-7377.995) (-7383.420) [-7376.169] * [-7370.790] (-7377.272) (-7372.588) (-7376.404) -- 0:00:36
Average standard deviation of split frequencies: 0.010150
836000 -- [-7375.197] (-7368.561) (-7367.747) (-7370.128) * (-7380.097) [-7375.422] (-7388.093) (-7375.444) -- 0:00:36
837000 -- (-7373.085) [-7374.367] (-7370.517) (-7365.608) * (-7373.973) (-7391.165) [-7371.035] (-7374.179) -- 0:00:35
838000 -- (-7373.824) (-7384.262) [-7369.902] (-7374.163) * [-7372.326] (-7371.366) (-7372.678) (-7378.189) -- 0:00:35
839000 -- (-7383.615) (-7378.606) (-7381.641) [-7370.173] * (-7375.540) (-7373.000) [-7368.329] (-7380.801) -- 0:00:35
840000 -- (-7379.792) (-7377.864) [-7374.271] (-7375.853) * (-7380.705) (-7375.037) [-7378.642] (-7379.189) -- 0:00:35
Average standard deviation of split frequencies: 0.009981
841000 -- (-7369.151) (-7378.731) [-7374.970] (-7374.265) * (-7375.939) (-7373.216) (-7379.185) [-7372.286] -- 0:00:34
842000 -- (-7375.278) (-7375.557) (-7379.193) [-7373.010] * (-7376.501) [-7375.232] (-7372.001) (-7373.754) -- 0:00:34
843000 -- [-7371.656] (-7372.243) (-7372.387) (-7376.303) * (-7382.036) [-7374.086] (-7391.164) (-7374.974) -- 0:00:34
844000 -- (-7375.819) [-7379.235] (-7377.577) (-7382.889) * (-7371.426) [-7368.969] (-7379.610) (-7378.432) -- 0:00:34
845000 -- (-7374.824) (-7377.863) [-7380.114] (-7377.831) * (-7373.177) [-7378.271] (-7378.831) (-7372.060) -- 0:00:34
Average standard deviation of split frequencies: 0.010476
846000 -- (-7380.555) [-7376.707] (-7373.427) (-7372.450) * (-7378.287) (-7387.453) [-7382.768] (-7377.492) -- 0:00:33
847000 -- (-7378.356) (-7370.820) [-7370.170] (-7375.891) * (-7375.425) (-7372.590) [-7372.206] (-7374.967) -- 0:00:33
848000 -- (-7374.607) [-7367.621] (-7374.712) (-7373.844) * (-7378.640) (-7371.578) [-7373.872] (-7377.131) -- 0:00:33
849000 -- [-7369.095] (-7385.952) (-7376.064) (-7379.447) * [-7367.962] (-7374.738) (-7383.357) (-7370.887) -- 0:00:33
850000 -- [-7369.091] (-7374.725) (-7378.391) (-7367.117) * (-7374.294) (-7382.352) (-7375.711) [-7370.873] -- 0:00:33
Average standard deviation of split frequencies: 0.010197
851000 -- (-7372.952) [-7377.637] (-7374.099) (-7375.351) * [-7370.082] (-7373.013) (-7382.583) (-7381.767) -- 0:00:32
852000 -- (-7372.767) (-7375.053) (-7377.123) [-7374.697] * (-7378.530) (-7379.180) [-7375.748] (-7377.453) -- 0:00:32
853000 -- (-7378.720) (-7368.723) [-7378.660] (-7377.622) * (-7371.223) (-7379.704) [-7373.474] (-7374.335) -- 0:00:32
854000 -- [-7371.373] (-7370.094) (-7373.695) (-7368.117) * [-7370.297] (-7369.577) (-7374.129) (-7370.640) -- 0:00:32
855000 -- [-7374.824] (-7375.766) (-7383.033) (-7371.399) * [-7368.720] (-7378.715) (-7372.804) (-7374.577) -- 0:00:31
Average standard deviation of split frequencies: 0.010463
856000 -- (-7377.104) [-7378.233] (-7369.093) (-7377.761) * (-7384.689) [-7370.922] (-7372.203) (-7382.992) -- 0:00:31
857000 -- (-7381.546) (-7374.809) [-7379.647] (-7376.723) * [-7371.713] (-7367.200) (-7368.342) (-7378.965) -- 0:00:31
858000 -- (-7377.547) (-7370.747) [-7374.679] (-7388.942) * (-7370.521) (-7375.784) (-7371.953) [-7377.275] -- 0:00:31
859000 -- (-7379.744) [-7373.964] (-7370.881) (-7378.770) * [-7371.052] (-7382.606) (-7379.106) (-7381.172) -- 0:00:31
860000 -- (-7377.884) (-7375.313) [-7368.671] (-7376.871) * [-7373.614] (-7379.459) (-7385.521) (-7371.836) -- 0:00:30
Average standard deviation of split frequencies: 0.011173
861000 -- (-7382.519) [-7369.433] (-7373.020) (-7378.466) * (-7378.843) (-7375.896) (-7377.253) [-7368.533] -- 0:00:30
862000 -- (-7387.920) (-7379.329) [-7370.899] (-7369.952) * (-7371.895) (-7376.781) [-7375.510] (-7382.302) -- 0:00:30
863000 -- (-7380.409) (-7374.604) [-7376.151] (-7376.446) * [-7376.234] (-7383.804) (-7375.877) (-7370.883) -- 0:00:30
864000 -- (-7372.521) [-7365.470] (-7373.504) (-7372.189) * (-7382.978) (-7383.984) [-7373.827] (-7371.210) -- 0:00:29
865000 -- (-7377.143) [-7376.100] (-7368.688) (-7372.660) * (-7377.457) [-7378.778] (-7376.325) (-7375.596) -- 0:00:29
Average standard deviation of split frequencies: 0.011105
866000 -- (-7381.688) (-7378.053) [-7370.712] (-7373.765) * (-7379.823) (-7374.714) (-7378.852) [-7372.776] -- 0:00:29
867000 -- (-7380.570) (-7385.286) [-7372.916] (-7380.304) * (-7382.764) (-7372.265) [-7382.825] (-7376.401) -- 0:00:29
868000 -- (-7381.751) (-7378.220) (-7370.699) [-7380.396] * (-7380.104) (-7388.824) [-7375.968] (-7369.378) -- 0:00:29
869000 -- (-7370.649) (-7368.735) [-7369.598] (-7372.689) * (-7375.338) [-7378.414] (-7383.675) (-7373.943) -- 0:00:28
870000 -- (-7372.008) (-7378.446) [-7371.182] (-7384.822) * (-7367.809) (-7371.797) (-7377.768) [-7371.104] -- 0:00:28
Average standard deviation of split frequencies: 0.011262
871000 -- (-7371.914) (-7375.458) (-7380.594) [-7375.726] * [-7370.853] (-7371.158) (-7380.341) (-7375.436) -- 0:00:28
872000 -- (-7378.403) (-7372.590) [-7374.812] (-7387.242) * (-7376.517) (-7372.984) (-7374.685) [-7375.796] -- 0:00:28
873000 -- (-7373.846) (-7379.243) (-7372.415) [-7377.237] * (-7377.403) [-7375.086] (-7377.727) (-7377.587) -- 0:00:27
874000 -- (-7377.993) (-7378.186) [-7374.566] (-7375.306) * (-7371.889) [-7374.114] (-7382.074) (-7372.736) -- 0:00:27
875000 -- (-7372.745) (-7378.381) [-7375.211] (-7369.936) * (-7378.096) (-7382.071) (-7382.767) [-7371.723] -- 0:00:27
Average standard deviation of split frequencies: 0.011839
876000 -- (-7378.096) (-7379.543) [-7370.631] (-7373.963) * (-7371.313) (-7385.453) (-7375.625) [-7382.430] -- 0:00:27
877000 -- (-7378.319) (-7373.725) (-7375.299) [-7369.343] * (-7374.529) [-7374.265] (-7374.657) (-7374.184) -- 0:00:27
878000 -- [-7369.086] (-7376.544) (-7387.333) (-7377.860) * (-7370.563) (-7371.440) (-7380.695) [-7380.195] -- 0:00:26
879000 -- (-7373.080) (-7374.476) [-7371.864] (-7374.957) * [-7382.444] (-7375.183) (-7379.246) (-7377.419) -- 0:00:26
880000 -- (-7381.199) (-7382.526) (-7384.297) [-7366.301] * (-7375.703) [-7378.014] (-7375.063) (-7371.150) -- 0:00:26
Average standard deviation of split frequencies: 0.011669
881000 -- (-7376.459) (-7373.123) [-7375.475] (-7371.118) * (-7377.470) (-7371.228) (-7375.250) [-7373.945] -- 0:00:26
882000 -- (-7377.332) [-7377.137] (-7373.557) (-7374.701) * (-7375.852) [-7373.817] (-7382.669) (-7376.944) -- 0:00:25
883000 -- (-7376.694) [-7372.620] (-7367.361) (-7377.233) * (-7374.792) (-7379.810) [-7378.747] (-7374.457) -- 0:00:25
884000 -- (-7379.018) (-7375.024) (-7377.684) [-7370.215] * (-7370.175) [-7376.915] (-7377.692) (-7377.894) -- 0:00:25
885000 -- (-7379.099) [-7375.921] (-7377.902) (-7376.303) * (-7368.958) [-7373.626] (-7373.544) (-7369.993) -- 0:00:25
Average standard deviation of split frequencies: 0.011386
886000 -- [-7380.349] (-7373.024) (-7372.513) (-7377.334) * (-7373.169) [-7370.821] (-7371.927) (-7375.738) -- 0:00:25
887000 -- [-7370.115] (-7370.601) (-7375.599) (-7372.469) * (-7379.700) (-7375.993) [-7378.992] (-7374.380) -- 0:00:24
888000 -- (-7378.160) (-7373.202) (-7378.283) [-7376.724] * (-7373.150) (-7375.250) [-7372.980] (-7371.160) -- 0:00:24
889000 -- [-7375.974] (-7378.127) (-7377.001) (-7384.948) * (-7374.759) (-7376.502) (-7374.974) [-7370.151] -- 0:00:24
890000 -- (-7380.944) (-7382.656) (-7382.179) [-7372.378] * (-7376.291) (-7376.838) (-7377.639) [-7371.347] -- 0:00:24
Average standard deviation of split frequencies: 0.010585
891000 -- (-7375.000) (-7374.390) [-7377.181] (-7372.541) * [-7372.509] (-7379.820) (-7381.575) (-7376.446) -- 0:00:23
892000 -- (-7377.496) [-7377.919] (-7379.292) (-7373.262) * [-7381.755] (-7386.299) (-7377.937) (-7368.942) -- 0:00:23
893000 -- (-7376.565) [-7376.595] (-7374.779) (-7383.157) * (-7370.820) (-7380.772) (-7374.654) [-7371.823] -- 0:00:23
894000 -- [-7373.592] (-7374.859) (-7369.806) (-7375.670) * (-7371.091) (-7373.379) (-7371.511) [-7369.930] -- 0:00:23
895000 -- (-7382.904) [-7377.278] (-7374.236) (-7390.278) * [-7377.470] (-7380.209) (-7376.140) (-7373.714) -- 0:00:23
Average standard deviation of split frequencies: 0.009575
896000 -- (-7375.887) (-7376.588) [-7375.498] (-7378.503) * (-7376.635) (-7367.302) (-7384.285) [-7372.467] -- 0:00:22
897000 -- (-7371.776) [-7372.456] (-7377.123) (-7372.127) * (-7373.461) [-7369.350] (-7371.013) (-7381.542) -- 0:00:22
898000 -- (-7389.281) (-7373.460) (-7391.812) [-7371.990] * [-7371.236] (-7373.853) (-7377.945) (-7376.061) -- 0:00:22
899000 -- (-7378.854) (-7380.341) (-7368.776) [-7371.033] * [-7377.447] (-7377.328) (-7382.818) (-7369.953) -- 0:00:22
900000 -- [-7377.037] (-7380.435) (-7365.493) (-7379.267) * [-7370.337] (-7374.784) (-7371.521) (-7384.466) -- 0:00:22
Average standard deviation of split frequencies: 0.009212
901000 -- [-7377.181] (-7373.639) (-7373.016) (-7379.998) * (-7370.868) [-7368.615] (-7373.825) (-7382.418) -- 0:00:21
902000 -- (-7375.733) [-7371.102] (-7374.748) (-7371.700) * (-7375.198) [-7373.332] (-7373.432) (-7384.191) -- 0:00:21
903000 -- [-7370.354] (-7373.186) (-7375.344) (-7378.799) * [-7376.733] (-7377.411) (-7372.256) (-7373.677) -- 0:00:21
904000 -- (-7378.257) (-7381.503) (-7369.467) [-7378.669] * (-7371.277) (-7380.638) [-7379.360] (-7372.208) -- 0:00:21
905000 -- [-7370.846] (-7371.562) (-7379.814) (-7372.857) * (-7381.894) (-7385.621) (-7370.041) [-7376.386] -- 0:00:20
Average standard deviation of split frequencies: 0.008949
906000 -- [-7371.558] (-7377.579) (-7381.279) (-7380.726) * (-7378.915) [-7372.973] (-7379.559) (-7377.712) -- 0:00:20
907000 -- (-7372.419) (-7376.645) (-7376.815) [-7373.957] * [-7372.083] (-7371.291) (-7377.786) (-7382.789) -- 0:00:20
908000 -- (-7372.143) (-7373.505) [-7374.386] (-7371.595) * [-7369.987] (-7368.207) (-7370.649) (-7375.291) -- 0:00:20
909000 -- (-7378.616) (-7373.975) [-7380.191] (-7376.025) * (-7377.986) (-7377.745) (-7376.096) [-7373.371] -- 0:00:20
910000 -- (-7379.318) (-7379.446) (-7377.538) [-7376.630] * [-7379.565] (-7379.859) (-7376.238) (-7374.233) -- 0:00:19
Average standard deviation of split frequencies: 0.009214
911000 -- [-7370.809] (-7374.634) (-7377.585) (-7378.002) * (-7372.798) (-7376.946) [-7371.272] (-7373.542) -- 0:00:19
912000 -- (-7370.367) (-7377.053) (-7381.166) [-7375.131] * [-7368.929] (-7371.014) (-7374.492) (-7376.637) -- 0:00:19
913000 -- [-7375.958] (-7384.073) (-7377.378) (-7374.077) * (-7379.598) (-7375.043) [-7373.433] (-7382.442) -- 0:00:19
914000 -- [-7371.789] (-7385.393) (-7372.398) (-7370.784) * (-7377.032) (-7369.901) (-7380.247) [-7374.075] -- 0:00:18
915000 -- (-7371.654) (-7375.259) (-7381.357) [-7372.337] * (-7372.250) [-7373.923] (-7370.407) (-7375.122) -- 0:00:18
Average standard deviation of split frequencies: 0.008955
916000 -- (-7376.817) (-7370.455) (-7377.974) [-7370.468] * (-7373.863) [-7383.310] (-7376.810) (-7375.520) -- 0:00:18
917000 -- [-7377.075] (-7370.378) (-7379.988) (-7371.189) * (-7380.118) (-7372.382) [-7376.260] (-7382.941) -- 0:00:18
918000 -- (-7380.697) [-7375.285] (-7378.766) (-7376.654) * (-7377.270) (-7377.173) (-7375.076) [-7385.733] -- 0:00:18
919000 -- [-7377.181] (-7380.200) (-7377.699) (-7369.322) * (-7394.837) (-7378.240) [-7371.845] (-7375.048) -- 0:00:17
920000 -- (-7378.839) (-7377.510) (-7371.872) [-7373.249] * (-7372.578) (-7378.414) [-7370.491] (-7378.817) -- 0:00:17
Average standard deviation of split frequencies: 0.009421
921000 -- [-7371.118] (-7371.478) (-7379.795) (-7371.878) * (-7386.180) (-7377.908) [-7375.420] (-7380.863) -- 0:00:17
922000 -- (-7373.770) (-7373.890) [-7372.976] (-7382.062) * (-7379.358) (-7375.396) [-7378.071] (-7371.193) -- 0:00:17
923000 -- [-7377.201] (-7372.006) (-7371.967) (-7375.927) * [-7372.750] (-7372.700) (-7384.625) (-7380.828) -- 0:00:16
924000 -- (-7373.333) [-7377.007] (-7378.085) (-7376.284) * (-7378.623) (-7376.968) [-7375.046] (-7375.858) -- 0:00:16
925000 -- [-7369.667] (-7378.503) (-7378.792) (-7378.407) * (-7378.918) (-7386.874) [-7370.536] (-7372.820) -- 0:00:16
Average standard deviation of split frequencies: 0.009978
926000 -- (-7377.661) (-7387.215) (-7374.958) [-7379.437] * [-7377.265] (-7375.291) (-7380.903) (-7381.536) -- 0:00:16
927000 -- (-7384.466) (-7380.271) (-7372.386) [-7373.285] * (-7371.263) [-7382.308] (-7379.394) (-7374.755) -- 0:00:16
928000 -- [-7369.179] (-7381.548) (-7377.103) (-7373.340) * (-7376.411) (-7376.908) (-7380.470) [-7374.102] -- 0:00:15
929000 -- [-7372.277] (-7376.933) (-7375.141) (-7375.033) * [-7371.769] (-7371.126) (-7374.270) (-7377.305) -- 0:00:15
930000 -- (-7377.707) (-7372.383) (-7371.850) [-7373.643] * (-7368.967) [-7377.759] (-7372.380) (-7378.638) -- 0:00:15
Average standard deviation of split frequencies: 0.010232
931000 -- (-7375.802) (-7378.101) (-7366.790) [-7376.838] * [-7370.754] (-7377.674) (-7368.663) (-7381.681) -- 0:00:15
932000 -- (-7375.801) (-7374.317) (-7367.824) [-7375.302] * (-7374.136) [-7374.612] (-7372.355) (-7372.160) -- 0:00:14
933000 -- (-7374.674) (-7375.524) [-7371.674] (-7376.742) * (-7370.108) (-7384.116) [-7376.340] (-7372.524) -- 0:00:14
934000 -- (-7372.850) [-7375.257] (-7373.263) (-7378.826) * (-7369.214) [-7373.308] (-7378.528) (-7380.323) -- 0:00:14
935000 -- (-7373.091) (-7370.385) [-7372.244] (-7381.773) * (-7376.818) [-7374.278] (-7374.495) (-7376.803) -- 0:00:14
Average standard deviation of split frequencies: 0.009972
936000 -- [-7375.435] (-7370.912) (-7374.404) (-7377.690) * [-7376.358] (-7375.336) (-7374.894) (-7372.803) -- 0:00:14
937000 -- (-7373.480) [-7373.142] (-7376.867) (-7385.518) * (-7373.966) (-7380.588) (-7380.623) [-7371.261] -- 0:00:13
938000 -- (-7376.343) [-7372.127] (-7380.303) (-7370.400) * (-7367.943) (-7379.068) (-7375.646) [-7370.729] -- 0:00:13
939000 -- (-7378.272) (-7378.700) (-7373.748) [-7378.307] * (-7378.371) [-7372.681] (-7372.336) (-7371.823) -- 0:00:13
940000 -- [-7367.172] (-7372.329) (-7372.979) (-7379.675) * (-7374.462) (-7374.706) (-7378.480) [-7375.326] -- 0:00:13
Average standard deviation of split frequencies: 0.010323
941000 -- (-7374.333) (-7377.635) [-7372.196] (-7378.636) * (-7379.651) [-7370.455] (-7385.494) (-7381.333) -- 0:00:12
942000 -- (-7369.818) [-7376.870] (-7386.920) (-7370.650) * (-7373.848) (-7370.211) (-7372.837) [-7371.066] -- 0:00:12
943000 -- (-7379.774) [-7373.066] (-7377.571) (-7369.085) * (-7371.126) (-7380.176) (-7389.592) [-7370.515] -- 0:00:12
944000 -- [-7370.688] (-7369.713) (-7381.090) (-7375.364) * (-7372.395) [-7373.815] (-7376.230) (-7376.737) -- 0:00:12
945000 -- (-7369.464) (-7369.791) [-7372.826] (-7367.770) * (-7371.802) (-7374.333) (-7380.267) [-7377.967] -- 0:00:12
Average standard deviation of split frequencies: 0.010664
946000 -- [-7374.943] (-7375.084) (-7375.556) (-7375.342) * (-7376.247) [-7371.074] (-7375.566) (-7378.392) -- 0:00:11
947000 -- (-7374.209) [-7375.001] (-7377.611) (-7371.679) * (-7378.727) (-7370.715) [-7373.506] (-7379.394) -- 0:00:11
948000 -- (-7375.329) (-7373.558) (-7378.411) [-7373.495] * (-7381.076) (-7375.722) (-7386.958) [-7376.799] -- 0:00:11
949000 -- [-7372.615] (-7379.763) (-7382.115) (-7378.985) * (-7370.103) (-7376.770) [-7370.260] (-7376.143) -- 0:00:11
950000 -- [-7373.464] (-7377.147) (-7377.633) (-7378.128) * (-7370.779) [-7373.672] (-7396.592) (-7374.059) -- 0:00:11
Average standard deviation of split frequencies: 0.010711
951000 -- [-7378.932] (-7374.650) (-7374.878) (-7389.497) * (-7380.256) (-7377.608) [-7380.889] (-7378.890) -- 0:00:10
952000 -- (-7380.020) [-7368.226] (-7374.902) (-7374.782) * (-7374.126) (-7375.193) [-7375.429] (-7378.837) -- 0:00:10
953000 -- (-7383.208) (-7370.525) (-7377.438) [-7379.190] * [-7378.313] (-7381.426) (-7372.642) (-7374.043) -- 0:00:10
954000 -- (-7376.064) (-7373.525) [-7372.707] (-7381.363) * (-7379.409) (-7371.287) [-7382.130] (-7376.152) -- 0:00:10
955000 -- (-7372.394) (-7375.147) [-7371.134] (-7380.411) * (-7379.943) (-7376.434) [-7378.307] (-7379.863) -- 0:00:09
Average standard deviation of split frequencies: 0.009862
956000 -- (-7380.703) [-7374.026] (-7377.293) (-7381.018) * (-7384.361) [-7367.961] (-7379.229) (-7373.572) -- 0:00:09
957000 -- (-7373.733) (-7377.550) (-7377.881) [-7372.551] * (-7383.688) (-7383.743) [-7370.922] (-7377.276) -- 0:00:09
958000 -- (-7373.180) (-7373.544) [-7379.473] (-7382.045) * (-7374.649) (-7389.539) [-7375.383] (-7370.006) -- 0:00:09
959000 -- (-7376.361) [-7375.317] (-7373.128) (-7375.692) * (-7372.778) (-7369.422) [-7379.907] (-7371.463) -- 0:00:09
960000 -- (-7374.344) (-7372.329) (-7375.794) [-7369.556] * [-7371.431] (-7373.618) (-7374.843) (-7381.324) -- 0:00:08
Average standard deviation of split frequencies: 0.009127
961000 -- (-7377.468) (-7375.041) (-7371.220) [-7378.791] * (-7372.542) [-7376.519] (-7380.335) (-7376.090) -- 0:00:08
962000 -- [-7376.292] (-7374.483) (-7380.670) (-7376.116) * (-7368.704) [-7372.097] (-7394.193) (-7377.565) -- 0:00:08
963000 -- (-7381.225) (-7373.818) [-7373.904] (-7372.547) * [-7370.272] (-7376.268) (-7375.982) (-7377.142) -- 0:00:08
964000 -- (-7396.098) [-7372.998] (-7370.113) (-7369.388) * (-7378.130) (-7376.045) (-7372.636) [-7377.605] -- 0:00:07
965000 -- (-7388.174) (-7368.995) (-7376.688) [-7371.512] * (-7379.437) (-7373.882) (-7368.802) [-7381.418] -- 0:00:07
Average standard deviation of split frequencies: 0.009565
966000 -- (-7376.769) [-7380.201] (-7372.898) (-7369.745) * (-7385.113) (-7378.356) (-7375.231) [-7373.716] -- 0:00:07
967000 -- [-7380.653] (-7373.658) (-7381.084) (-7372.011) * (-7373.908) (-7373.653) (-7375.767) [-7372.494] -- 0:00:07
968000 -- (-7373.731) (-7371.932) [-7377.445] (-7375.099) * [-7372.686] (-7369.426) (-7379.715) (-7374.991) -- 0:00:07
969000 -- [-7374.102] (-7367.920) (-7380.659) (-7374.333) * (-7379.713) (-7376.325) (-7378.907) [-7370.419] -- 0:00:06
970000 -- (-7374.571) (-7367.851) (-7373.379) [-7372.066] * (-7374.235) (-7376.032) [-7371.871] (-7373.814) -- 0:00:06
Average standard deviation of split frequencies: 0.009519
971000 -- (-7376.078) (-7382.304) [-7371.884] (-7374.742) * [-7374.743] (-7372.651) (-7380.719) (-7377.727) -- 0:00:06
972000 -- (-7372.744) (-7372.455) [-7371.444] (-7388.232) * (-7372.773) [-7376.808] (-7391.377) (-7380.479) -- 0:00:06
973000 -- (-7377.880) (-7370.651) (-7377.090) [-7377.794] * (-7369.005) (-7379.391) (-7378.890) [-7370.054] -- 0:00:05
974000 -- (-7382.383) [-7380.003] (-7373.165) (-7381.154) * (-7378.678) [-7375.437] (-7375.391) (-7373.613) -- 0:00:05
975000 -- (-7373.646) (-7373.198) [-7373.353] (-7382.561) * (-7374.663) (-7379.213) (-7375.526) [-7379.733] -- 0:00:05
Average standard deviation of split frequencies: 0.009177
976000 -- [-7374.653] (-7388.620) (-7376.091) (-7379.415) * [-7366.568] (-7372.597) (-7379.610) (-7381.378) -- 0:00:05
977000 -- (-7377.910) [-7380.866] (-7370.839) (-7380.069) * (-7373.380) (-7376.687) [-7381.024] (-7374.137) -- 0:00:05
978000 -- (-7370.825) (-7371.563) (-7379.146) [-7373.580] * (-7373.067) (-7383.737) (-7373.371) [-7375.757] -- 0:00:04
979000 -- (-7378.977) [-7381.394] (-7376.735) (-7370.777) * (-7371.924) (-7376.476) (-7377.127) [-7383.874] -- 0:00:04
980000 -- (-7374.491) [-7367.990] (-7378.414) (-7366.259) * (-7370.423) (-7375.798) (-7374.054) [-7373.913] -- 0:00:04
Average standard deviation of split frequencies: 0.009326
981000 -- (-7373.280) (-7381.136) (-7373.717) [-7379.603] * [-7376.648] (-7378.526) (-7379.250) (-7378.161) -- 0:00:04
982000 -- (-7377.986) [-7373.861] (-7373.998) (-7374.314) * (-7371.235) [-7378.299] (-7379.097) (-7378.572) -- 0:00:03
983000 -- (-7376.783) (-7372.042) (-7374.292) [-7370.665] * (-7370.069) (-7372.908) (-7378.467) [-7372.334] -- 0:00:03
984000 -- (-7371.751) (-7374.297) [-7386.934] (-7375.144) * [-7366.310] (-7378.086) (-7376.364) (-7376.898) -- 0:00:03
985000 -- (-7375.575) (-7381.564) [-7374.157] (-7374.523) * (-7371.260) (-7373.148) [-7376.900] (-7373.054) -- 0:00:03
Average standard deviation of split frequencies: 0.010231
986000 -- (-7378.113) (-7377.119) [-7376.689] (-7379.335) * (-7366.231) (-7377.846) [-7372.683] (-7372.114) -- 0:00:03
987000 -- (-7382.341) (-7376.457) (-7379.666) [-7377.221] * [-7365.963] (-7374.257) (-7373.055) (-7377.328) -- 0:00:02
988000 -- (-7371.684) (-7381.182) [-7374.472] (-7383.850) * (-7372.165) [-7366.306] (-7372.850) (-7369.500) -- 0:00:02
989000 -- (-7374.219) [-7372.719] (-7383.855) (-7388.834) * (-7375.743) [-7373.403] (-7372.543) (-7380.709) -- 0:00:02
990000 -- (-7377.207) (-7375.301) (-7375.782) [-7374.667] * (-7372.629) (-7377.930) (-7379.811) [-7370.954] -- 0:00:02
Average standard deviation of split frequencies: 0.009802
991000 -- (-7382.682) [-7376.436] (-7382.532) (-7373.450) * (-7378.497) (-7378.675) (-7370.173) [-7370.190] -- 0:00:01
992000 -- (-7381.157) (-7377.700) (-7376.873) [-7380.660] * [-7379.147] (-7379.061) (-7373.463) (-7381.124) -- 0:00:01
993000 -- (-7374.073) (-7372.341) [-7378.716] (-7372.167) * [-7379.532] (-7376.920) (-7372.635) (-7373.550) -- 0:00:01
994000 -- (-7374.136) [-7367.802] (-7377.900) (-7375.881) * [-7375.737] (-7377.758) (-7379.252) (-7373.611) -- 0:00:01
995000 -- (-7376.401) (-7383.621) [-7367.782] (-7369.501) * (-7379.864) (-7372.821) (-7375.967) [-7376.222] -- 0:00:01
Average standard deviation of split frequencies: 0.009939
996000 -- (-7375.607) [-7377.834] (-7376.229) (-7379.493) * [-7368.999] (-7372.314) (-7377.309) (-7384.612) -- 0:00:00
997000 -- (-7374.205) (-7375.509) [-7369.742] (-7377.670) * (-7373.531) (-7378.981) [-7373.500] (-7378.849) -- 0:00:00
998000 -- (-7372.056) (-7369.058) [-7367.401] (-7379.217) * (-7372.115) (-7389.836) (-7384.073) [-7374.420] -- 0:00:00
999000 -- (-7376.772) (-7370.159) [-7373.012] (-7372.225) * (-7367.894) [-7370.212] (-7372.459) (-7374.327) -- 0:00:00
1000000 -- (-7374.780) [-7372.398] (-7378.928) (-7370.221) * (-7374.275) (-7373.498) (-7374.332) [-7372.367] -- 0:00:00
Average standard deviation of split frequencies: 0.009704
Analysis completed in 3 mins 40 seconds
Analysis used 219.14 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -7362.52
Likelihood of best state for "cold" chain of run 2 was -7362.55
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
46.0 % ( 44 %) Dirichlet(Revmat{all})
64.2 % ( 52 %) Slider(Revmat{all})
10.7 % ( 17 %) Dirichlet(Pi{all})
22.6 % ( 26 %) Slider(Pi{all})
68.4 % ( 48 %) Multiplier(Alpha{1,2})
49.6 % ( 20 %) Multiplier(Alpha{3})
35.6 % ( 27 %) Slider(Pinvar{all})
27.2 % ( 29 %) ExtSPR(Tau{all},V{all})
43.5 % ( 35 %) ExtTBR(Tau{all},V{all})
37.0 % ( 45 %) NNI(Tau{all},V{all})
29.0 % ( 32 %) ParsSPR(Tau{all},V{all})
26.9 % ( 23 %) Multiplier(V{all})
41.4 % ( 49 %) Nodeslider(V{all})
25.5 % ( 31 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
46.2 % ( 47 %) Dirichlet(Revmat{all})
64.8 % ( 58 %) Slider(Revmat{all})
10.8 % ( 13 %) Dirichlet(Pi{all})
22.1 % ( 22 %) Slider(Pi{all})
68.3 % ( 37 %) Multiplier(Alpha{1,2})
50.0 % ( 34 %) Multiplier(Alpha{3})
35.4 % ( 27 %) Slider(Pinvar{all})
27.3 % ( 33 %) ExtSPR(Tau{all},V{all})
43.4 % ( 46 %) ExtTBR(Tau{all},V{all})
36.7 % ( 41 %) NNI(Tau{all},V{all})
28.9 % ( 33 %) ParsSPR(Tau{all},V{all})
26.9 % ( 33 %) Multiplier(V{all})
41.2 % ( 49 %) Nodeslider(V{all})
25.5 % ( 25 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.81 0.64 0.50
2 | 166828 0.82 0.67
3 | 166196 166440 0.83
4 | 167333 166319 166884
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.81 0.65 0.50
2 | 166512 0.82 0.67
3 | 166332 166677 0.84
4 | 166873 167059 166547
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -7372.17
| 1 2 1 1 |
| 2 1 |
| 21 1 2 2 |
| 2 2 1 |
| 2 2 1 2 1 21 22 2 1 2 1 |
| 2 12 1 1 2 2* 212 1 221|
|* 2 1 1 2 12 21 2 * 1 * 2 |
| 1 1 12 1 2 * 1 1 1 11 2 1 1 * 2|
| 2 1 1 2 2 2 1 12 1 |
| 2 1 1 2 11 2 2 1 |
| 1 2 2 1 11 2 2 2 |
| 2 2 2 2 |
| 1 1 |
| 2 1 1 2 |
| 1 2 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -7376.29
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -7369.71 -7382.19
2 -7369.80 -7384.40
--------------------------------------
TOTAL -7369.76 -7383.81
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.477311 0.006893 0.329037 0.642248 0.468062 837.55 892.55 1.000
r(A<->C){all} 0.030897 0.000522 0.000020 0.074344 0.026481 537.07 583.42 1.000
r(A<->G){all} 0.270995 0.002941 0.170754 0.379970 0.266489 684.63 717.60 1.000
r(A<->T){all} 0.057173 0.000309 0.023435 0.091474 0.056257 828.79 846.66 1.000
r(C<->G){all} 0.052219 0.000516 0.010621 0.095700 0.049610 614.24 758.76 1.000
r(C<->T){all} 0.559917 0.003498 0.441464 0.669438 0.560492 619.52 675.85 1.000
r(G<->T){all} 0.028799 0.000175 0.005656 0.054511 0.027055 762.92 868.34 1.000
pi(A){all} 0.264362 0.000045 0.252282 0.278199 0.264256 1071.87 1143.16 1.000
pi(C){all} 0.189270 0.000034 0.178080 0.201017 0.189250 1207.01 1255.55 1.000
pi(G){all} 0.217355 0.000039 0.205782 0.229799 0.217239 1066.40 1140.82 1.000
pi(T){all} 0.329013 0.000048 0.315813 0.342927 0.328889 1043.36 1147.41 1.000
alpha{1,2} 0.029646 0.000355 0.000014 0.062686 0.028127 1068.78 1160.04 1.000
alpha{3} 4.478679 2.616680 1.819327 7.640598 4.223066 1365.72 1384.77 1.000
pinvar{all} 0.596911 0.000649 0.550500 0.648454 0.598038 1270.87 1385.93 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C2
3 -- C3
4 -- C4
5 -- C5
6 -- C6
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------
1 -- .*****
2 -- .*....
3 -- ..*...
4 -- ...*..
5 -- ....*.
6 -- .....*
7 -- .*..*.
8 -- .*.***
9 -- ...*.*
10 -- .*..**
11 -- .*.**.
------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
7 2819 0.939041 0.000471 0.938708 0.939374 2
8 2701 0.899734 0.001413 0.898734 0.900733 2
9 1030 0.343105 0.021670 0.327781 0.358428 2
10 897 0.298801 0.009893 0.291805 0.305796 2
11 882 0.293804 0.015075 0.283145 0.304464 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.470886 0.006891 0.326910 0.639896 0.461291 1.000 2
length{all}[2] 0.001351 0.000000 0.000301 0.002626 0.001259 1.000 2
length{all}[3] 0.000628 0.000000 0.000000 0.001882 0.000445 1.000 2
length{all}[4] 0.000258 0.000000 0.000000 0.000760 0.000178 1.000 2
length{all}[5] 0.001335 0.000000 0.000317 0.002598 0.001236 1.000 2
length{all}[6] 0.000540 0.000000 0.000007 0.001287 0.000447 1.000 2
length{all}[7] 0.000788 0.000000 0.000042 0.001664 0.000706 1.000 2
length{all}[8] 0.001336 0.000000 0.000168 0.002656 0.001265 1.000 2
length{all}[9] 0.000282 0.000000 0.000000 0.000821 0.000212 0.999 2
length{all}[10] 0.000270 0.000000 0.000000 0.000809 0.000183 1.002 2
length{all}[11] 0.000259 0.000000 0.000001 0.000827 0.000181 1.002 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.009704
Maximum standard deviation of split frequencies = 0.021670
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.002
Clade credibility values:
/------------------------------------------------------------------------ C1 (1)
|
|------------------------------------------------------------------------ C3 (3)
|
+ /------------------------ C2 (2)
| /-----------94----------+
| | \------------------------ C5 (5)
| |
\-----------90----------+------------------------------------------------ C4 (4)
|
\------------------------------------------------ C6 (6)
Phylogram (based on average branch lengths):
/------------------------------------------------------------------------ C1 (1)
|
| C3 (3)
|
+- C2 (2)
|
|- C5 (5)
|
| C4 (4)
|
\ C6 (6)
|--------------| 0.100 expected changes per site
Calculating tree probabilities...
Credible sets of trees (35 trees sampled):
50 % credible set contains 2 trees
90 % credible set contains 4 trees
95 % credible set contains 10 trees
99 % credible set contains 21 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
Running FUBAR...
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\
***************** TYPES OF STANDARD ANALYSES *****************
(1) Selection Analyses
(2) Evolutionary Hypothesis Testing
(3) Relative evolutionary rate inference
(4) Coevolutionary analysis
(5) Basic Analyses
(6) Codon Selection Analyses
(7) Compartmentalization
(8) Data File Tools
(9) Miscellaneous
(10) Model Comparison
(11) Kernel Analysis Tools
(12) Molecular Clock
(13) Phylogeny Reconstruction
(14) Positive Selection
(15) Recombination
(16) Selection/Recombination
(17) Relative Rate
(18) Relative Ratio
(19) Substitution Rates
Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' *****************
(1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution).
(2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood).
(3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting).
(4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection).
(5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification).
(6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood).
(7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation).
Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types):
Analysis Description
--------------------
Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a
coding sequence alignment to determine whether some sites have been
subject to pervasive purifying or diversifying selection. v2.1
introduces two more methods for estimating the posterior distribution of
grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation
Bayes approximation (fastest). Please note that a FUBAR analysis
generates a cache and a results JSON file in the same directory as
directory as the original alignment. HyPhy needs to have write
privileges to this directory. For example if the original file is in
/home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there
will also exist FUBAR-generated files
/home/sergei/FUBAR/data/pol.nex.FUBAR.json,
/home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide
checkpointing so that a partially completed analysis can be restarted.
- __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree
(one per partition)
- __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring
selection (2013), Mol Biol Evol. 30(5):1196-205
- __Written by__: Sergei L Kosakovsky Pond
- __Contact Information__: spond@temple.edu
- __Analysis Version__: 2.1
####Choose Genetic Code
1. [**Universal**] Universal code. (Genebank transl_table=1).
2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2).
3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3).
4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4).
5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5).
6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6).
7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9).
8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10).
9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12).
10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13).
11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14).
12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15).
13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16).
14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21).
15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22).
16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23).
17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24).
18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25).
19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26).
>Please choose an option (or press q to cancel selection):
>Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`)
>A tree was found in the data file: `(C1,C3,((C2,C5),C4,C6))`
>Would you like to use it (y/n)?
>Loaded a multiple sequence alignment with **6** sequences, **1376** codons, and **1** partitions from `/data//pss_subsets/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/results/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1.fna`
> FUBAR will write cache and result files to _/data//pss_subsets/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/results/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/results/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1.fna.FUBAR.json_, respectively
> Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer):
####Posterior estimation method
1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation)
2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed)
3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default)
>Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5):
### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model
* Log(L) = -7470.92, AIC-c = 14973.85 (16 estimated parameters)
* Tree length (expected substitutions/site) for partition 1 : 0.119
### Computing the phylogenetic likelihood function on the grid
* Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid
* Best scaling achieved for
* synonymous rate = 2.815
* non-synonymous rate = 0.429
* Computing conditional site likelihoods on a 20 x 20 rate grid
### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights
* Using the following settings
* Dirichlet alpha : 0.5
### Tabulating site-level results
----
## FUBAR inferred no sites under subject to positive selection at posterior probability >= 0.9
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.11 sec, SCORE=1000, Nseq=6, Len=1376
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus MLFVFILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLGT
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus MLFVFILFLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT
*******:*************** ** ** *.********:*:**:****
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus YYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQF
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus YYVLDRVYLNTTLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF
**********:*************::*********::**:**:**:**:*
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus NDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYNSYTVVIEPYNGVIMA
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA
*************.**:***:************ .*****:****.:***
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus SVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNAD
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus SVCIYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP
*** ********* ********::*************:******:****
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus AFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPPA
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA
:******:******************************:******.*.*
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus GSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSML
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus GSTLLPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL
***: * ******:*********:************** *********:*
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus PSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERKT
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus PSTGVYDLSSYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT
******:**.*************.*** *:*******:**********:*
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus FQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSRQ
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ
******************** *********** ****:******:*****
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus VDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRRY
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY
:***:**********************:*:**********:*********
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus GFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSAF
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus GFNDAGVFGKSNHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY
**********.:***.*********.************.**:**** **:
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus --------------------------------------------------
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPLDTYDLRCGQIK
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus --VNVGDHCEGLGVLEDKCGNADPHKGCICANNSFIGWSHDTCLVNDRCQ
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ
*******************:****** ***:*****************
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus IFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKEVK
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK
***************************.**:**:****************
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus ADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDAPE
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE
********:**********************************:**:***
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus PALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD
**************:***********************************
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus LRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGLYE
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE
*****************:*************** ***********.****
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus MQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSFCV
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD
***************** *:***************:*************
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL
**************************************************
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ
**************************************************
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus EVLDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGVPF
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF
** ***************************:***********:*******
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus SLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALGKI
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI
**.**********************************:************
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRLIN
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN
************************************:*************
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus GRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNGNH
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH
*********************.****************************
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus ILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYFVQ
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ
************ ******** **.*************************
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus DDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNPPD
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD
*:********.*************:* ***************.**** **
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus FKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLNES
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES
*****************************:********************
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFK
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR
*************************************************:
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus KCGNCCDEYGGHQDSIVIHNISSHED
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus KCGSCCDEYGGHQDSIVIHNISAHED
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus KCGSCCDEYGGHQDSIVIHNISAHED
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus KCGSCCDEYGGHQDSIVIHNISAHED
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus KCGSCCDEYGGHQDSIVIHNISAHED
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus KCGSCCDEYGGHQDSIVIHNISAHED
***.******************:***
>A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus ATGCTGTTCGTGTTTATTCTATTTTTGCCCTCTTGCCTAGGGTATATTGGTGATTTTAGATGTATCCAGCTTGTGAATTCAAACGGTGCTAATGTTAGTGCTCCAAGCATTAGCACTGAGACCGTTGAAGTTTCACAAGGCCTGGGGACATATTATGTGTTAGATCGAGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCGGTCGATGGTTCTAAGTTTAGAAACCTCGCTCTTACGGGAACTAACTCAGTTAGCTTGTCGTGGTTTCAACCACCCTATTTAAGTCAGTTTAATGATGGCATATTTGCGAAGGTGCAGAACCTTAAGACAAGTACGCCATCAGGTGCAACTGCATATTTTCCTACTATAGTTATAGGTAGTTTGTTTGGCTATAATTCCTATACCGTTGTAATAGAGCCATATAATGGTGTTATAATGGCCTCAGTGTGCCAGTATACCATTTGTCAGTTACCTTACACTGATTGTAAGCCTAACACTAATGGTAATAAATTAATAGGGTTTTGGCACACGGATGTAAAACCCCCAATTTGTGTGTTAAAGCGAAATTTCACGCTTAATGTTAATGCTGATGCATTTTATTTTCATTTTTACCAACATGGTGGTACTTTTTATGCGTACTATGCGGATAAACCCTCCGCTACTACGTTTTTGTTTAGTGTATATATTGGCGATATTTTAACACAGTATTATGTGTTACCTTTCATCTGCAACCCACCAGCTGGTAGCACTTTTGCTCCGCGCTATTGGGTTACACCTTTGGTTAAGCGCCAATATTTGTTTAATTTCAACCAGAAGGGTGTCATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAATGTAAGACCCAGAGCATGTTACCTAGCACTGGTGTTTATGAGTTATCCGGTTATACGGTCCAACCAGTTGGAGTTGTATACCGGCGTGTTGCTAACCTCCCAGCTTGTAATATAGAGGAGTGGCTTACTGCTAGGTCAGTCCCCTCCCCTCTCAACTGGGAGCGTAAGACTTTTCAGAATTGTAATTTTAATTTAAGCAGCCTGTTACGTTATGTTCAGGCTGAGAGTTTGTTTTGTAATAATATCGATGCTTCCAAAGTGTATGGCAGGTGCTTTGGTAGTATTTCAGTTGATAAGTTTGCTGTACCCCGAAGTAGGCAAGTTGATTTACAGCTTGGTAACTCTGGATTTCTGCAGACTGCTAATTATAAGATTGATACAGCTGCCACTTCGTGTCAGCTGCATTACACCTTGCCTAAGAATAATGTCACCATAAACAACCATAACCCCTCGTCTTGGAATAGGAGGTATGGCTTTAATGATGCTGGCGTCTTTGGCAAAAACCAACATGACGTTGTTTACGCTCAGCAATGTTTTACTGTAAGATCTAGTTATTGCCCGTGTGCTCAACCGGACATAGTTAGCCCTTGCACTACTCAGACTAAGCCTAAGTCTGCTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------GTTAATGTGGGTGACCATTGTGAAGGCTTAGGTGTTTTAGAAGATAAATGTGGCAATGCTGATCCACATAAGGGTTGTATCTGTGCCAACAATTCATTTATTGGATGGTCACATGATACCTGCCTTGTTAATGATCGCTGCCAAATTTTTGCTAATATATTGTTAAATGGCATTAATAGTGGTACCACATGTTCCACAGATTTGCAGTTGCCTAATACTGAAGTGGTTACTGGCATTTGTGTCAAATATGACCTCTACGGTATTACTGGACAAGGTGTTTTTAAAGAGGTTAAGGCTGACTATTATAATAGCTGGCAAACACTTCTGTATGATGTTAATGGTAATTTGAATGGTTTTCGTGATCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATTTCATAAAGATGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGCTATGTTTTTAGCAATAATATTTCCCGTGAGGAGAACCCACTTAATTACTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGTGATCTCCGTATGGGTGCTGGCTTATGCGTTGATTATTCAAAATCACGCAGGGCTCACCGATCAGTTTCTACTGGCTATCGGTTAACTACATTTGAGCCATACACTCCGATGTTAGTTAATGATAGTGTCCAATCCGTTGATGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGGCACCATGAGGAGTTCATTCAAACTAGATCTCCAAAGGTGACTATAGATTGTGCTGCATTTGTCTGTGGTGATAACACTGCATGCAGGCAGCAGTTGGTTGAGTATGGCTCTTTCTGTGTTAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAACTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGCTCGAGACTGCCAGACGGCATCTCAGGCCCTATAGATGACATTAATTTTAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCAATCCGAGGGCGTTCTGCTATAGAGGATTTGTTATTTGACAAGGTCAAATTATCTGATGTTGGCTTTGTCGAGGCTTATAATAATTGCACCGGTGGTCAAGAAGTTCTTGACCTCCTTTGTGTACAATCTTTTAATGGCATCAAAGTATTACCTCCTGTGTTGTCAGAGAGTCAGATCTCTGGCTACACAACCGGTGCTACTGCGGCAGCTATGTTCCCACCGTGGTCAGCAGCTGCCGGTGTGCCATTTAGTTTAAGTGTTCAATATAGAATTAATGGTTTAGGTGTCACTATGAATGTGCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAATGCGCTGGGTGCTATCCAGGATGGGTTTGATGCAACCAATTCTGCTTTAGGTAAGATCCAGTCCGTTGTTAATGCAAATGCTGAAGCACTCAATAACTTACTAAATCAACTTTCTAACAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACTCGGCTTGAGGCTGTAGAAGCAAAAGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTTAGTGATAGTACGCTTATTAAAGTTAGTGCTGCTCAGGCCATAGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACCACGCGTATTAATTTCTGTGGCAATGGTAATCATATATTATCTCTTGTCCAGAATGCGCCTTATGGCTTATATTTTATACACTTCAGCTATGTGCCAATATCCTTTACAACCGCAAATGTGAGTCCTGGACTTTGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAATGGAAGTTCACAGGCAGTTCATATTACTACCCTGAACCCATTACAGATAAAAACAGTGTCATTATGAGTAGTTGCGCAGTAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCCACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAGTTAAATGTTACTTTGCTGGACCTGACGTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTCTTTATATGTTGCTGCACAGGTTGTGGCTCATGTTGTTTTAAGAAGTGTGGAAATTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT >MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus ATGCTGTTCGTCTTTATTTTACTATTACCCTCTTGTTTAGGGTATATTGGTGATTTTAGATGTATCCAGACCGTGAATTATAACGGCAATAATGCTTCTGCGCCTAGCATTAGCACCGAAGCAGTCGATGTTTCCAAAGGTCTGGGCACTTACTATGTTTTAGATCGTGTTTACTTAAATACCACGTTATTGCTTACTGGTTATTATCCTGTGGACGGTTCCAATTATCGGAATCTCGCGCTTACAGGCACTAATACCTTAAGCCTTACGTGGTTTAAACCACCCTTTCTAAGTGAGTTTAATGATGGTATATTTGCTAAGGTCCAGAACCTCAAGACAAATACGCCAACAGGTGCAACCTCATATTTTCCCACTATAGTTATAGGTAGTTTGTTTGGTAACACTTCCTATACCGTAGTTTTAGAGCCATATAATAATATTATAATGGCTTCTGTTTGTATATATACCATTTGTCAATTACCTTACACACCCTGTAAGCCTAATACCAATGGTAATCGTGTTATTGGATTTTGGCACACAGATGTCAAACCGCCGATTTGTCTTTTAAAGCGTAATTTTACGTTTAATGTTAATGCCCCTTGGCTTTATTTCCATTTTTATCAGCAGGGTGGTACTTTTTATGCGTACTATGCGGATAAACCTTCCGCTACTACGTTTTTGTTTAGTGTGTATATTGGCGACATTTTAACACAGTATTTTGTGTTACCTTTTATTTGTACTCCAACAGCTGGTAGCACTTTAGCTCCGCTCTATTGGGTTACACCTTTACTTAAGCGCCAATATTTGTTTAATTTTAATGAAAAGGGTGTCATTACTAGTGCTGTTGATTGCGCCAGCAGCTACATTAGTGAAATAAAATGTAAGACCCAAAGTCTCTTACCGAGTACTGGTGTCTATGATCTATCCAGTTACACGGTCCAACCTGTTGGAGTTGTGTACCGGCGTGTTCCTAACCTACCTGATTGTAAAATAGAGGAATGGCTCACTGCTAAATCTGTGCCGTCACCTCTCAATTGGGAGCGTAGGACTTTCCAAAATTGTAATTTTAATTTAAGCAGCCTGCTACGTTATGTCCAGGCTGAGTCTTTGTCGTGTAATAATATTGATGCGTCCAAAGTGTATGGTATGTGCTTTGGTAGTGTCTCAGTTGATAAGTTTGCTATCCCCCGAAGCCGTCAAATTGATTTACAAATTGGCAACTCCGGATTTTTGCAAACGGCTAATTATAAGATTGATACCGCTGCCACATCATGTCAGCTGTATTACAGTCTTCCTAAGAATAATGTTACCATAAATAACTATAACCCCTCGTCTTGGAATAGGAGGTATGGTTTTAATGATGCTGGTGTGTTTGGCAAAAGTAAACATGATGTTGCCTACGCCCAGCAATGTTTTACTGTGCGACCTAGCTATTGTCCGTGTGCACAACCGGACATAGTTAGCGCTTGCACTAGTCAGACCAAACCCATGTCTGCTTATTGCCCCACAGGCACAATTCATCGTGAGTGTTCTCTTTGGAATGGGCCCCATTTGCGCTCGGCACGTGTAGGTTCCGGCACGTACACGTGTGAGTGCACTTGTAAACCCAATCCATTGGATACGTATGATCTCCGCTGTGGGCAAATTAAAACTATTGTTAATGTGGGCGATCATTGTGAAGGTCTGGGTGTTTTAGAAGATAAATGTGGCAATAGCGATCCACATAAGGGCTGTTCTTGTGCCAATGATTCTTTTATCGGATGGTCACATGACACTTGTTTAGTAAATGATCGCTGCCAAATTTTTGCTAACATATTGTTAAATGGCATTAATAGTGGGACTACGTGTTCCACAGATTTACAATTGCCTAATACTGAAGTGGCCACTGGCGTTTGCGTCAGATATGACCTCTATGGTATTACTGGTCAAGGTGTTTTTAAAGAGGTCAAGGCTGACTATTATAATAGCTGGCAGGCCCTATTATATGATGTTAATGGTAACTTAAACGGGTTCCGTGACCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATATCATAAAGAAGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGTTATGTTTTTACTAATAATATTTCCCGTGAGGAAAACCCCCTTAACTATTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGCGATCTCCGTATGGGTGCTGGACTATGCGTAGATTATTCAAAGTCACGCAGAGCCCGCCGATCAGTTTCTACTGGCTATCGATTAACCACATTCGAGCCATACATGCCGATGTTAGTCAATGATAGCGTTCAATCCGTAGGTGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGTCATCATGAGGAATTCATCCAGATAAGGGCTCCCAAGGTGACTATAGATTGTGCTGCATTTGTTTGTGGTGATAACGCTGCATGCAGACAGCAGTTGGTTGAGTATGGCTCTTTTTGTGATAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAATTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGTTCGAGGCTGCCAGATGGCATCTCCGGCCCTATAGATGACATTAATTTCAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCGATACGGGGGCGTTCAGCTATAGAGGATTTATTATTTGACAAGGTCAAACTATCTGACGTTGGCTTTGTCGAGGCTTATAACAATTGCACTGGTGGTCAAGAAGTTCGCGACCTCCTTTGCGTACAGTCTTTTAATGGCATCAAAGTATTACCTCCCGTGTTGTCTGAGAGTCAAATCTCTGGCTACACAGCGGGTGCTACTGCGGCAGCTATGTTCCCACCTTGGACTGCAGCTGCTGGTGTGCCATTCAGTTTAAATGTTCAATATAGGATTAATGGTTTAGGTGTCACTATGAATGTTCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAACGCGCTCGGTGCTATTCAGGAAGGGTTCGATGCAACCAATTCTGCTCTAGGTAAGATCCAGTCCGTTGTTAATGCAAACGCTGAAGCACTTAATAATTTATTAAACCAACTTTCTAATAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACGCGGCTTGACGCTGTAGAAGCAAAGGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTCAGTGATAGTACGCTTATTAAATTTAGTGCTGCTCAGGCCATCGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACTACGCGCATTAATTTCTGTGGCAATGGTAATCACATATTATCACTTGTCCAGAATGCGCCTTATGGCTTATGTTTTATTCATTTCAGCTACGTGCCAACATCCTTTAAAACGGCAAATGTGAGTCCTGGACTATGCATTTCTGGTGATAGAGGATTGGCACCTAAAGCTGGATATTTTGTTCAAGATAATGGAGAGTGGAAGTTCACAGGCAGTAATTATTACTACCCTGAACCCATTACAGATAAAAATAGTGTTGTCATGATCAGTTGCGCTGTGAATTACACAAAAGCGCCTGAAGTTTTCTTGAACAACTCAATACCAAATCTACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCCCTCGATTTCGAGAAGTTAAATGTTACTTTCCTGGACCTGACTTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGTTTAGCTGGTGTAGCTGTTTGTGTGTTATTATTCTTTATATGTTGCTGCACAGGTTGCGGCTCATGTTGTTTTAGAAAATGCGGAAGTTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCAGCCCATGAGGAT >RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus ATGCTGTTCGTGTTTATTCTATTTTTGCCCTCTTGCCTAGGGTATATTGGTGATTTTAGATGTATCCAGACCGTGAATTATAACGGCAATAATGCTTCTGCGCCTAGCATTAGCACCGAAGCAGTCGATGTTTCCAAAGGTCTGGGCACTTACTATGTTTTAGATCGTGTTTACTTAAATGCCACGTTATTGCTTACTGGTTATTATCCTGTGGACGGTTCCAATTATCGGAATCTCGCGCTTACAGGCACTAATACCTTAAGCCTTACGTGGTTTAAACCACCCTTTCTAAGTGAGTTTAATGATGGTATATTTGCTAAGGTCCAGAACCTCAAGACAAATACGCCAACAGGTGCAACCTCATATTTTCCCACTATAGTTATAGGTAGTTTGTTTGGTAACACTTCCTATACCGTAGTTTTAGAGCCATATAATAATATTATAATGGCTTCTGTTTGTACATATACCATTTGTCAATTACCTTACACACCCTGTAAGCCTAATACCAATGGTAATCGTGTTATTGGATTTTGGCACACAGATGTCAAACCGCCGATTTGTCTTTTAAAGCGTAATTTTACGTTTAATGTTAATGCCCCTTGGCTTTATTTCCATTTTTATCAGCAGGGTGGTACTTTTTATGCGTACTATGCGGATAAACCTTCCGCTACTACGTTTTTGTTTAGTGTGTATATTGGCGACATTTTAACACAGTATTTTGTGTTACCTTTTATTTGTACTCCAACAGCTGGTAGCACTTTAGCTCCGCTCTATTGGGTTACACCTTTACTTAAGCGCCAATATTTGTTTAATTTTAATGAAAAGGGTGTCATTACTAGTGCTGTTGATTGCGCCAGCAGCTACATTAGTGAAATAAAATGTAAGACCCAAAGTCTCTTACCGAGTACTGGTGTCTATGATCTATCCGGTTACACGGTCCAACCTGTTGGAGTTGTGTACCGGCGTGTTCCTAACCTACCTGATTGTAAAATAGAGGAATGGCTCACTGCTAAATCTGTGCCGTCACCTCTCAATTGGGAGCGTAGGACTTTCCAAAATTGTAATTTTAATTTAAGCAGCCTGCTACGTTATGTCCAGGCTGAGTCTTTGTCGTGTAATAATATTGATGCGTCCAAAGTGTATGGTATGTGCTTTGGTAGTGTCTCAGTTGATAAGTTTGCTATCCCCCGAAGCCGTCAAATTGATTTACAAATTGGCAACTCCGGATTTTTGCAAACGGCTAATTATAAGATTGATACCGCTGCCACATCATGTCAGCTGTATTACAGTCTTCCTAAGAATAATGTTACCATAAATAACTATAACCCCTCGTCTTGGAATAGGAGGTATGGTTTTAATGATGCTGGTGTGTTTGGCAAAAGTAAACATGATGTTGCCTACGCCCAGCAATGTTTTACTGTGCGACCTAGCTATTGTCCGTGTGCACAACCGGACATAGTTAGCGCTTGCACTAGTCAGACCAAACCCATGTCTGCTTATTGCCCCACAGGCACAATTCATCGTGAGTGTTCTCTTTGGAATGGGCCCCATTTGCGCTCGGCACGTGTAGGTTCCGGCACGTACACGTGTGAGTGCACTTGTAAACCCAATCCATTTGATACGTATGATCTCCGCTGTGGGCAAATTAAAACTATTGTTAATGTGGGCGATCATTGTGAAGGTCTGGGTGTTTTAGAAGATAAATGTGGCAATAGCGATCCACATAAGGGCTGTTCTTGTGCCAATGATTCTTTTATCGGATGGTCACATGACACTTGTTTAGTAAATGATCGCTGCCAAATTTTTGCTAACATATTGTTAAATGGCATTAATAGTGGGACTACGTGTTCCACAGATTTACAATTGCCTAATACTGAAGTGGCCACTGGCGTTTGCGTCAGATATGACCTCTATGGTATTACTGGTCAAGGTGTTTTTAAAGAGGTCAAGGCTGACTATTATAATAGCTGGCAGGCCCTATTATATGATGTTAATGGTAACTTAAACGGGTTCCGTGACCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATATCATAAAGAAGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGTTATGTTTTTACTAATAATATTTCCCGTGAGGAAAACCCCCTTAACTATTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGCGATCTCCGTATGGGTGCTGGACTATGCGTAGATTATTCAAAGTCACGCAGAGCCCGCCGATCAGTTTCTACTGGCTATCGATTAACCACATTCGAGCCATACATGCCGATGTTAGTCAATGATAGCGTTCAATCCGTAGGTGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGTCATCATGAGGAATTCATCCAGATAAGGGCTCCCAAGGTGACTATAGATTGTGCTGCATTTGTTTGTGGTGATAACGCTGCATGCAGACAGCAGTTGGTTGAGTATGGCTCTTTTTGTGATAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAATTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGTTCGAGGCTGCCAGATGGCATCTCCGGCCCTATAGATGACATTAATTTCAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCGATACGGGGGCGTTCAGCTATAGAGGATTTATTATTTGACAAGGTCAAACTATCTGACGTTGGCTTTGTCGAGGCTTATAACAATTGCACTGGTGGTCAAGAAGTTCGCGACCTCCTTTGCGTACAGTCTTTTAATGGCATCAAAGTATTACCTCCCGTGTTGTCTGAGAGTCAAATCTCTGGCTACACAGCGGGTGCTACTGCGGCAGCTATGTTCCCACCTTGGACTGCAGCTGCTGGTGTGCCATTCAGTTTAAATGTTCAATATAGGATTAATGGTTTAGGTGTCACTATGAATGTTCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAACGCGCTCGGTGCTATTCAGGAAGGGTTCGATGCAACCAATTCTGCTCTAGGTAAGATCCAGTCCGTTGTTAATGCAAACGCTGAAGCACTTAATAATTTATTAAACCAACTTTCTAATAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACGCGGCTTGACGCTGTAGAAGCAAAGGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTCAGTGATAGTACGCTTATTAAATTTAGTGCTGCTCAGGCCATCGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACTACGCGCATTAATTTCTGTGGCAATGGTAATCACATATTATCACTTGTCCAGAATGCGCCTTATGGCTTATGTTTTATTCATTTCAGCTACGTGCCAACATCCTTTAAAACGGCAAATGTGAGTCCTGGACTATGCATTTCTGGTGATAGAGGATTGGCACCTAAAGCTGGATATTTTGTTCAAGATAATGGAGAGTGGAAGTTCACAGGCAGTAATTATTACTACCCTGAACCCATTACAGATAAAAATAGTGTTGTCATGATCAGTTGCGCTGTGAATTACACAAAAGCGCCTGAAGTTTTCTTGAACAACTCAATACCAAATCTACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCCCTCGATTTCGAGAAGTTAAATGTTACTTTCCTGGACCTGACTTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGTTTAGCTGGTGTAGCTGTTTGTGTGTTATTATTCTTTATATGTTGCTGCACAGGTTGCGGCTCATGTTGTTTTAGAAAATGCGGAAGTTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCAGCCCATGAGGAT >RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus ATGCTGTTCGTCTTTATTTTACTATTACCCTCTTGCCTAGGGTATATTGGTGATTTTAGATGTATCCAGACCGTGAATTATAACGGCAATAATGCTTCTGCGCCTAGCATTAGCACCGAAGCAGTCGATGTTTCCAAAGGTCTGGGCACTTACTATGTTTTAGATCGTGTTTACTTAAATGCCACGTTATTGCTTACTGGTTATTATCCTGTGGACGGTTCCAATTATCGGAATCTCGCGCTTACAGGCACTAATACCTTAAGCCTTACGTGGTTTAAACCACCCTTTCTAAGTGAGTTTAATGATGGTATATTTGCTAAGGTCCAGAACCTCAAGACAAATACGCCAACAGGTGCAACCTCATATTTTCCCACTATAGTTATAGGTAGTTTGTTTGGTAACACTTCCTATACCGTAGTTTTAGAGCCATATAATAATATTATAATGGCTTCTGTTTGTACATATACCATTTGTCAATTACCTTACACACCCTGTAAGCCTAATACCAATGGTAATCGTGTTATTGGATTTTGGCACACAGATGTCAAACCGCCGATTTGTCTTTTAAAGCGTAATTTTACGTTTAATGTTAATGCCCCTTGGCTTTATTTCCATTTTTATCAGCAGGGTGGTACTTTTTATGCGTACTATGCGGATAAACCTTCCGCTACTACGTTTTTGTTTAGTGTGTATATTGGCGACATTTTAACACAGTATTTTGTGTTACCTTTTATTTGTACTCCAACAGCTGGTAGCACTTTAGCTCCGCTCTATTGGGTTACACCTTTACTTAAGCGCCAATATTTGTTTAATTTTAATGAAAAGGGTGTCATTACTAGTGCTGTTGATTGCGCCAGCAGCTACATTAGTGAAATAAAATGTAAGACCCAAAGTCTCTTACCGAGTACTGGTGTCTATGATCTATCCGGTTACACGGTCCAACCTGTTGGAGTTGTGTACCGGCGTGTTCCTAACCTACCTGATTGTAAAATAGAGGAATGGCTCACTGCTAAATCTGTGCCGTCACCTCTCAATTGGGAGCGTAGGACTTTCCAAAATTGTAATTTTAATTTAAGCAGCCTGCTACGTTATGTCCAGGCTGAGTCTTTGTCGTGTAATAATATTGATGCGTCCAAAGTGTATGGTATGTGCTTTGGTAGTGTCTCAGTTGATAAGTTTGCTATCCCCCGAAGCCGTCAAATTGATTTACAAATTGGCAACTCCGGATTTTTGCAAACGGCTAATTATAAGATTGATACCGCTGCCACATCATGTCAGCTGTATTACAGTCTTCCTAAGAATAATGTTACCATAAATAACTATAACCCCTCGTCTTGGAATAGGAGGTATGGTTTTAATGATGCTGGTGTGTTTGGCAAAAGTAAACATGATGTTGCCTACGCCCAGCAATGTTTTACTGTGCGACCTAGCTATTGTCCGTGTGCACAACCGGACATAGTTAGCGCTTGCACTAGTCAGACCAAACCCATGTCTGCTTATTGCCCCACAGGCACAATTCATCGTGAGTGTTCTCTTTGGAATGGGCCCCATTTGCGCTCGGCACGTGTAGGTTCCGGCACGTACACGTGTGAGTGCACTTGTAAACCCAATCCATTTGATACGTATGATCTCCGCTGTGGGCAAATTAAAACTATTGTTAATGTGGGCGATCATTGTGAAGGTCTGGGTGTTTTAGAAGATAAATGTGGCAATAGCGATCCACATAAGGGCTGTTCTTGTGCCAATGATTCTTTTATCGGATGGTCACATGACACTTGTTTAGTAAATGATCGCTGCCAAATTTTTGCTAACATATTGTTAAATGGCATTAATAGTGGGACTACGTGTTCCACAGATTTACAATTGCCTAATACTGAAGTGGCCACTGGCGTTTGCGTCAGATATGACCTCTATGGTATTACTGGTCAAGGTGTTTTTAAAGAGGTCAAGGCTGACTATTATAATAGCTGGCAGGCCCTATTATATGATGTTAATGGTAACTTAAACGGGTTCCGTGACCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATATCATAAAGAAGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGTTATGTTTTTACTAATAATATTTCCCGTGAGGAAAACCCCCTTAACTATTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGCGATCTCCGTATGGGTGCTGGACTATGCGTAGATTATTCAAAGTCACGCAGAGCCCGCCGATCAGTTTCTACTGGCTATCGATTAACCACATTCGAGCCATACATGCCGATGTTAGTCAATGATAGCGTTCAATCCGTAGGTGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGTCATCATGAGGAATTCATCCAGATAAGGGCTCCCAAGGTGACTATAGATTGTGCTGCATTTGTTTGTGGTGATAACGCTGCATGCAGACAGCAGTTGGTTGAGTATGGCTCTTTTTGTGATAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAATTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGTTCGAGGCTGCCAGATGGCATCTCCGGCCCTATAGATGACATTAATTTCAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCGATACGGGGGCGTTCAGCTATAGAGGATTTATTATTTGACAAGGTCAAACTATCTGACGTTGGCTTTGTCGAGGCTTATAACAATTGCACTGGTGGTCAAGAAGTTCGCGACCTCCTTTGCGTACAGTCTTTTAATGGCATCAAAGTATTACCTCCCGTGTTGTCTGAGAGTCAAATCTCTGGCTACACAGCGGGTGCTACTGCGGCAGCTATGTTCCCACCTTGGACTGCAGCTGCTGGTGTGCCATTCAGTTTAAATGTTCAATATAGGATTAATGGTTTAGGTGTCACTATGAATGTTCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAACGCGCTCGGTGCTATTCAGGAAGGGTTCGATGCAACCAATTCTGCTCTAGGTAAGATCCAGTCCGTTGTTAATGCAAACGCTGAAGCACTTAATAATTTATTAAACCAACTTTCTAATAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACGCGGCTTGACGCTGTAGAAGCAAAGGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTCAGTGATAGTACGCTTATTAAATTTAGTGCTGCTCAGGCCATCGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACTACGCGCATTAATTTCTGTGGCAATGGTAATCACATATTATCACTTGTCCAGAATGCGCCTTATGGCTTATGTTTTATTCATTTCAGCTACGTGCCAACATCCTTTAAAACGGCAAATGTGAGTCCTGGACTATGCATTTCTGGTGATAGAGGATTGGCACCTAAAGCTGGATATTTTGTTCAAGATAATGGAGAGTGGAAGTTCACAGGCAGTAATTATTACTACCCTGAACCCATTACAGATAAAAATAGTGTTGTCATGATCAGTTGCGCTGTGAATTACACAAAAGCGCCTGAAGTTTTCTTGAACAACTCAATACCAAATCTACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCCCTCGATTTCGAGAAGTTAAATGTTACTTTCCTGGACCTGACTTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGTTTAGCTGGTGTAGCTGTTTGTGTGTTATTATTCTTTATATGTTGCTGCACAGGTTGCGGCTCATGTTGTTTTAGAAAATGCGGAAGTTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCAGCCCATGAGGAT >UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus ATGCTGTTCGTCTTTATTTTACTATTACCCTCTTGTTTAGGGTATATTGGTGATTTTAGATGTATCCAGACCGTGAATTATAACGGCAATAATGCTTCTGCGCCTAGCATTAGCACCGAAGCAGTCGATGTTTCCAAAGGTCTGGGCACTTACTATGTTTTAGATCGTGTTTACTTAAATGCCACGTTATTGCTTACTGGTTATTATCCTGTGGACGGTTCCAATTATCGGAATCTCGCGCTTACAGGCACTAATACCTTAAGCCTTACGTGGTTTAAACCACCCTTTCTAAGTGAGTTTAATGATGGTATATTTGCTAAGGTCCAGAACCTCAAGACAAATACGCCAACAGGTGCAACCTCATATTTTCCCACTATAGTTATAGGTAGTTTGTTTGGTAACACTTCCTATACCGTAGTTTTAGAGCCATATAATAATATTATAATGGCTTCTGTTTGTACATATACCATTTGTCAATTACCTTACACACCCTGTAAGCCTAATACCAATGGTAATCGTGTTATTGGATTTTGGCACACAGATGTCAAACCGCCGATTTGTCTTTTAAAGCGTAATTTTACGTTTAATGTTAATGCCCCTTGGCTTTATTTCCATTTTTATCAGCAGGGTGGTACTTTTTATGCGTACTATGCGGATAAACCTTCCGCTACTACGTTTTTGTTTAGTGTGTATATTGGCGACATTTTAACACAGTATTTTGTGTTACCTTTTATTTGTACTCCAACAGCTGGTAGCACTTTACTGCCGCTCTATTGGGTTACACCTTTACTTAAGCGCCAATATTTGTTTAATTTTAATGAAAAGGGTGTCATTACTAGTGCTGTTGATTGCGCCAGCAGCTACATTAGTGAAATAAAATGTAAGACCCAAAGTCTCTTACCGAGTACTGGTGTCTATGATCTATCCGGTTACACGGTCCAACCTGTTGGAGTTGTGTACCGGCGTGTTCCTAACCTACCTGATTGTAAAATAGAGGAATGGCTCACTGCTAAATCTGTGCCGTCACCTCTCAATTGGGAGCGTAGGACTTTCCAAAATTGTAATTTTAATTTAAGCAGCCTGCTACGTTATGTCCAGGCTGAGTCTTTGTCGTGTAATAATATTGATGCGTCCAAAGTGTATGGTATGTGCTTTGGTAGTGTCTCAGTTGATAAGTTTGCTATCCCCCGAAGCCGTCAAATTGATTTACAAATTGGCAACTCCGGATTTTTGCAAACGGCTAATTATAAGATTGATACCGCTGCCACATCATGTCAGCTGTATTACAGTCTTCCTAAGAATAATGTTACCATAAATAACTATAACCCCTCGTCTTGGAATAGGAGGTATGGTTTTAATGATGCTGGTGTGTTTGGCAAAAGTAAACATGATGTTGCCTACGCCCAGCAATGTTTTACTGTGCGACCTAGCTATTGTCCGTGTGCACAACCGGACATAGTTAGCGCTTGCACTAGTCAGACCAAACCCATGTCTGCTTATTGCCCCACAGGCACAATTCATCGTGAGTGTTCTCTTTGGAATGGGCCCCATTTGCGCTCGGCACGTGTAGGTTCCGGCACGTACACGTGTGAGTGCACTTGTAAACCCAATCCATTTGATACGTATGATCTCCGCTGTGGGCAAATTAAAACTATTGTTAATGTGGGCGATCATTGTGAAGGTCTGGGTGTTTTAGAAGATAAATGTGGCAATAGCGATCCACATAAGGGCTGTTCTTGTGCCAATGATTCTTTTATCGGATGGTCACATGACACTTGTTTAGTAAATGATCGCTGCCAAATTTTTGCTAACATATTGTTAAATGGCATTAATAGTGGGACTACGTGTTCCACAGATTTACAATTGCCTAATACTGAAGTGGCCACTGGCGTTTGCGTCAGATATGACCTCTATGGTATTACTGGTCAAGGTGTTTTTAAAGAGGTCAAGGCTGACTATTATAATAGCTGGCAGGCCCTATTATATGATGTTAATGGTAACTTAAACGGGTTCCGTGACCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATATCATAAAGAAGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGTTATGTTTTTACTAATAATATTTCCCGTGAGGAAAACCCCCTTAACTATTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGCGATCTCCGTATGGGTGCTGGACTATGCGTAGATTATTCAAAGTCACGCAGAGCCCGCCGATCAGTTTCTACTGGCTATCGATTAACCACATTCGAGCCATACATGCCGATGTTAGTCAATGATAGCGTTCAATCCGTAGGTGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGTCATCATGAGGAATTCATCCAGATAAGGGCTCCCAAGGTGACTATAGATTGTGCTGCATTTGTTTGTGGTGATAACGCTGCATGCAGACAGCAGTTGGTTGAGTATGGCTCTTTTTGTGATAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAATTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGTTCGAGGCTGCCAGATGGCATCTCCGGCCCTATAGATGACATTAATTTCAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCGATACGGGGGCGTTCAGCTATAGAGGATTTATTATTTGACAAGGTCAAACTATCTGACGTTGGCTTTGTCGAGGCTTATAACAATTGCACTGGTGGTCAAGAAGTTCGCGACCTCCTTTGCGTACAGTCTTTTAATGGCATCAAAGTATTACCTCCCGTGTTGTCTGAGAGTCAAATCTCTGGCTACACAGCGGGTGCTACTGCGGCAGCTATGTTCCCACCTTGGACTGCAGCTGCTGGTGTGCCATTCAGTTTAAATGTTCAATATAGGATTAATGGTTTAGGTGTCACTATGAATGTTCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAACGCGCTCGGTGCTATTCAGGAAGGGTTCGATGCAACCAATTCTGCTCTAGGTAAGATCCAGTCCGTTGTTAATGCAAACGCTGAAGCACTTAATAATTTATTAAACCAACTTTCTAATAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACGCGGCTTGACGCTGTAGAAGCAAAGGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTCAGTGATAGTACGCTTATTAAATTTAGTGCTGCTCAGGCCATCGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACTACGCGCATTAATTTCTGTGGCAATGGTAATCACATATTATCACTTGTCCAGAATGCGCCTTATGGCTTATGTTTTATTCATTTCAGCTACGTGCCAACATCCTTTAAAACGGCAAATGTGAGTCCTGGACTATGCATTTCTGGTGATAGAGGATTGGCACCTAAAGCTGGATATTTTGTTCAAGATAATGGAGAGTGGAAGTTCACAGGCAGTAATTATTACTACCCTGAACCCATTACAGATAAAAATAGTGTTGTCATGATCAGTTGCGCTGTGAATTACACAAAAGCGCCTGAAGTTTTCTTGAACAACTCAATACCAAATCTACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCCCTCGATTTCGAGAAGTTAAATGTTACTTTCCTGGACCTGACTTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGTTTAGCTGGTGTAGCCGTTTGTGTGTTATTATTCTTTATATGTTGCTGCACAGGTTGCGGCTCATGTTGTTTTAGAAAATGCGGAAGTTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCAGCCCATGAGGAT >repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus ATGCTGTTCGTCTTTATTTTACTATTACCCTCTTGCCTAGGGTATATTGGTGATTTTAGATGTATCCAGACCGTGAATTATAACGGCAATAATGCTTCTGCGCCTAGCATTAGCACCGAAGCAGTCGATGTTTCCAAAGGTCTGGGCACTTACTATGTTTTAGATCGTGTTTACTTAAATGCCACGTTATTGCTTACTGGTTATTATCCTGTGGACGGTTCCAATTATCGGAATCTCGCGCTTACAGGCACTAATACCTTAAGCCTTACGTGGTTTAAACCACCCTTTCTAAGTGAGTTTAATGATGGTATATTTGCTAAGGTCCAGAACCTCAAGACAAATACGCCAACAGGTGCAACCTCATATTTTCCCACTATAGTTATAGGTAGTTTGTTTGGTAACACTTCCTATACCGTAGTTTTAGAGCCATATAATAATATTATAATGGCTTCTGTTTGTACATATACCATTTGTCAATTACCTTACACACCCTGTAAGCCTAATACCAATGGTAATCGTGTTATTGGATTTTGGCACACAGATGTCAAACCGCCGATTTGTCTTTTAAAGCGTAATTTTACGTTTAATGTTAATGCCCCTTGGCTTTATTTCCATTTTTATCAGCAGGGTGGTACTTTTTATGCGTACTATGCGGATAAACCTTCCGCTACTACGTTTTTGTTTAGTGTGTATATTGGCGACATTTTAACACAGTATTTTGTGTTACCTTTTATTTGTACTCCAACAGCTGGTAGCACTTTAGCTCCGCTCTATTGGGTTACACCTTTACTTAAGCGCCAATATTTGTTTAATTTTAATGAAAAGGGTGTCATTACTAGTGCTGTTGATTGCGCCAGCAGCTACATTAGTGAAATAAAATGTAAGACCCAAAGTCTCTTACCGAGTACTGGTGTCTATGATCTATCCGGTTACACGGTCCAACCTGTTGGAGTTGTGTACCGGCGTGTTCCTAACCTACCTGATTGTAAAATAGAGGAATGGCTCACTGCTAAATCTGTGCCGTCACCTCTCAATTGGGAGCGTAGGACTTTCCAAAATTGTAATTTTAATTTAAGCAGCCTGCTACGTTATGTCCAGGCTGAGTCTTTGTCGTGTAATAATATTGATGCGTCCAAAGTGTATGGTATGTGCTTTGGTAGTGTCTCAGTTGATAAGTTTGCTATCCCCCGAAGCCGTCAAATTGATTTACAAATTGGCAACTCCGGATTTTTGCAAACGGCTAATTATAAGATTGATACCGCTGCCACATCATGTCAGCTGTATTACAGTCTTCCTAAGAATAATGTTACCATAAATAACTATAACCCCTCGTCTTGGAATAGGAGGTATGGTTTTAATGATGCTGGTGTGTTTGGCAAAAGTAATCATGATGTTGCCTACGCCCAGCAATGTTTTACTGTGCGACCTAGCTATTGTCCGTGTGCACAACCGGACATAGTTAGCGCTTGCACTAGTCAGACCAAACCCATGTCTGCTTATTGCCCCACAGGCACAATTCATCGTGAGTGTTCTCTTTGGAATGGGCCCCATTTGCGCTCGGCACGTGTAGGTTCCGGCACGTACACGTGTGAGTGCACTTGTAAACCCAATCCATTTGATACGTATGATCTCCGCTGTGGGCAAATTAAAACTATTGTTAATGTGGGCGATCATTGTGAAGGTCTGGGTGTTTTAGAAGATAAATGTGGCAATAGCGATCCACATAAGGGCTGTTCTTGTGCCAATGATTCTTTTATCGGATGGTCACATGACACTTGTTTAGTAAATGATCGCTGCCAAATTTTTGCTAACATATTGTTAAATGGCATTAATAGTGGGACTACGTGTTCCACAGATTTACAATTGCCTAATACTGAAGTGGCCACTGGCGTTTGCGTCAGATATGACCTCTATGGTATTACTGGTCAAGGTGTTTTTAAAGAGGTCAAGGCTGACTATTATAATAGCTGGCAGGCCCTATTATATGATGTTAATGGTAACTTAAACGGGTTCCGTGACCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATATCATAAAGAAGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGTTATGTTTTTACTAATAATATTTCCCGTGAGGAAAACCCCCTTAACTATTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGCGATCTCCGTATGGGTGCTGGACTATGCGTAGATTATTCAAAGTCACGCAGAGCCCGCCGATCAGTTTCTACTGGCTATCGATTAACCACATTCGAGCCATACATGCCGATGTTAGTCAATGATAGCGTTCAATCCGTAGGTGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGTCATCATGAGGAATTCATCCAGATAAGGGCTCCCAAGGTGACTATAGATTGTGCTGCATTTGTTTGTGGTGATAACGCTGCATGCAGACAGCAGTTGGTTGAGTATGGCTCTTTTTGTGATAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAATTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGTTCGAGGCTGCCAGATGGCATCTCCGGCCCTATAGATGACATTAATTTCAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCGATACGGGGGCGTTCAGCTATAGAGGATTTATTATTTGACAAGGTCAAACTATCTGACGTTGGCTTTGTCGAGGCTTATAACAATTGCACTGGTGGTCAAGAAGTTCGCGACCTCCTTTGCGTACAGTCTTTTAATGGCATCAAAGTATTACCTCCCGTGTTGTCTGAGAGTCAAATCTCTGGCTACACAGCGGGTGCTACTGCGGCAGCTATGTTCCCACCTTGGACTGCAGCTGCTGGTGTGCCATTCAGTTTAAATGTTCAATATAGGATTAATGGTTTAGGTGTCACTATGAATGTTCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAACGCGCTCGGTGCTATTCAGGAAGGGTTCGATGCAACCAATTCTGCTCTAGGTAAGATCCAGTCCGTTGTTAATGCAAACGCTGAAGCACTTAATAATTTATTAAACCAACTTTCTAATAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACGCGGCTTGACGCTGTAGAAGCAAAGGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTCAGTGATAGTACGCTTATTAAATTTAGTGCTGCTCAGGCCATCGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACTACGCGCATTAATTTCTGTGGCAATGGTAATCACATATTATCACTTGTCCAGAATGCGCCTTATGGCTTATGTTTTATTCATTTCAGCTACGTGCCAACATCCTTTAAAACGGCAAATGTGAGTCCTGGACTATGCATTTCTGGTGATAGAGGATTGGCACCTAAAGCTGGATATTTTGTTCAAGATAATGGAGAGTGGAAGTTCACAGGCAGTAATTATTACTACCCTGAACCCATTACAGATAAAAATAGTGTTGTCATGATCAGTTGCGCTGTGAATTACACAAAAGCGCCTGAAGTTTTCTTGAACAACTCAATACCAAATCTACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCCCTCGATTTCGAGAAGTTAAATGTTACTTTCCTGGACCTGACTTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGTTTAGCTGGTGTAGCTGTTTGTGTGTTATTATTCTTTATATGTTGCTGCACAGGTTGCGGCTCATGTTGTTTTAGAAAATGCGGAAGTTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCAGCCCATGAGGAT
>A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus MLFVFILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLGT YYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQF NDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYNSYTVVIEPYNGVIMA SVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNAD AFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPPA GSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSML PSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERKT FQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSRQ VDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRRY GFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSAF -------------------------------------------------- --VNVGDHCEGLGVLEDKCGNADPHKGCICANNSFIGWSHDTCLVNDRCQ IFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKEVK ADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDAPE PALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD LRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGLYE MQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSFCV NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ EVLDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGVPF SLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALGKI QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRLIN GRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNGNH ILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYFVQ DDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNPPD FKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLNES YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFK KCGNCCDEYGGHQDSIVIHNISSHED >MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT YYVLDRVYLNTTLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA SVCIYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL PSTGVYDLSSYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPLDTYDLRCGQIK TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR KCGSCCDEYGGHQDSIVIHNISAHED >RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus MLFVFILFLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR KCGSCCDEYGGHQDSIVIHNISAHED >RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR KCGSCCDEYGGHQDSIVIHNISAHED >UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA GSTLLPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY GFNDAGVFGKSKHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR KCGSCCDEYGGHQDSIVIHNISAHED >repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus MLFVFILLLPSCLGYIGDFRCIQTVNYNGNNASAPSISTEAVDVSKGLGT YYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLTWFKPPFLSEF NDGIFAKVQNLKTNTPTGATSYFPTIVIGSLFGNTSYTVVLEPYNNIIMA SVCTYTICQLPYTPCKPNTNGNRVIGFWHTDVKPPICLLKRNFTFNVNAP WLYFHFYQQGGTFYAYYADKPSATTFLFSVYIGDILTQYFVLPFICTPTA GSTLAPLYWVTPLLKRQYLFNFNEKGVITSAVDCASSYISEIKCKTQSLL PSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERRT FQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGSVSVDKFAIPRSRQ IDLQIGNSGFLQTANYKIDTAATSCQLYYSLPKNNVTINNYNPSSWNRRY GFNDAGVFGKSNHDVAYAQQCFTVRPSYCPCAQPDIVSACTSQTKPMSAY CPTGTIHRECSLWNGPHLRSARVGSGTYTCECTCKPNPFDTYDLRCGQIK TIVNVGDHCEGLGVLEDKCGNSDPHKGCSCANDSFIGWSHDTCLVNDRCQ IFANILLNGINSGTTCSTDLQLPNTEVATGVCVRYDLYGITGQGVFKEVK ADYYNSWQALLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHKEAPE PALLYRNINCSYVFTNNISREENPLNYFDSYLGCVVNADNRTDEALPNCD LRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYMPMLVNDSVQSVGGLYE MQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNAACRQQLVEYGSFCD NVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFSPL LGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQ EVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWTAAAGVPF SLNVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQEGFDATNSALGKI QSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLIN GRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKSQTTRINFCGNGNH ILSLVQNAPYGLCFIHFSYVPTSFKTANVSPGLCISGDRGLAPKAGYFVQ DNGEWKFTGSNYYYPEPITDKNSVVMISCAVNYTKAPEVFLNNSIPNLPD FKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTYEMNRIQDAIKKLNES YINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFR KCGSCCDEYGGHQDSIVIHNISAHED
Reading sequence file /data//pss_subsets/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/fasta/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1
Found 6 sequences of length 4128
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 3.6%
Found 7 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 1
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 286 polymorphic sites
**p-Value(s)**
----------
NSS: 1.00e+00 (1000 permutations)
Max Chi^2: 7.00e-03 (1000 permutations)
PHI (Permutation): 1.00e+00 (1000 permutations)
PHI (Normal): 1.00e+00
#NEXUS
[ID: 8057825737]
begin taxa;
dimensions ntax=6;
taxlabels
A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus
MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus
RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus
RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus
UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus
repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus
;
end;
begin trees;
translate
1 A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus,
2 MHV_JHM_IA_NA_ACN89763_1_NA_USA_Mouse_Murine_coronavirus,
3 RA59_SJHM_NA_ACN89705_1_NA_USA_Mouse_Murine_coronavirus,
4 RJHM_A_NA_ACN89696_1_NA_USA_Mouse_Murine_coronavirus,
5 UNKNOWN_AC_000192_S_YP_209233_1_NA_NA_Unknown_Murine_coronavirus,
6 repA59_RJHM_NA_ACN89722_1_NA_USA_Mouse_Murine_coronavirus
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:4.612912e-01,3:4.446532e-04,((2:1.258578e-03,5:1.235970e-03)0.939:7.056460e-04,4:1.775454e-04,6:4.474104e-04)0.900:1.265031e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:4.612912e-01,3:4.446532e-04,((2:1.258578e-03,5:1.235970e-03):7.056460e-04,4:1.775454e-04,6:4.474104e-04):1.265031e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -7369.75 -7385.13
2 -7369.96 -7385.79
--------------------------------------
TOTAL -7369.85 -7385.51
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.477215 0.007045 0.333221 0.656635 0.464919 1128.01 1163.17 1.001
r(A<->C){all} 0.031584 0.000536 0.000063 0.075476 0.027052 620.91 636.50 1.001
r(A<->G){all} 0.268303 0.002844 0.177091 0.380057 0.265668 366.17 444.01 1.000
r(A<->T){all} 0.056912 0.000327 0.021006 0.090728 0.055893 791.37 810.27 1.000
r(C<->G){all} 0.053914 0.000552 0.011471 0.099103 0.050985 746.76 759.87 1.000
r(C<->T){all} 0.561272 0.003488 0.443246 0.673230 0.561507 363.98 452.79 1.000
r(G<->T){all} 0.028016 0.000187 0.004568 0.054030 0.026170 685.77 879.44 1.000
pi(A){all} 0.264615 0.000046 0.251666 0.278127 0.264537 1095.44 1144.96 1.000
pi(C){all} 0.189354 0.000033 0.177531 0.200019 0.189325 1056.28 1102.41 1.000
pi(G){all} 0.217093 0.000039 0.204122 0.227911 0.217226 978.75 1057.56 1.000
pi(T){all} 0.328938 0.000048 0.314807 0.341412 0.328905 1105.75 1159.08 1.000
alpha{1,2} 0.029212 0.000356 0.000010 0.062156 0.027597 1025.77 1053.64 1.000
alpha{3} 4.503595 2.597207 1.726028 7.589136 4.244605 1404.30 1452.65 1.000
pinvar{all} 0.596905 0.000648 0.547338 0.645285 0.598930 1359.50 1425.50 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\ ***************** TYPES OF STANDARD ANALYSES ***************** (1) Selection Analyses (2) Evolutionary Hypothesis Testing (3) Relative evolutionary rate inference (4) Coevolutionary analysis (5) Basic Analyses (6) Codon Selection Analyses (7) Compartmentalization (8) Data File Tools (9) Miscellaneous (10) Model Comparison (11) Kernel Analysis Tools (12) Molecular Clock (13) Phylogeny Reconstruction (14) Positive Selection (15) Recombination (16) Selection/Recombination (17) Relative Rate (18) Relative Ratio (19) Substitution Rates Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' ***************** (1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution). (2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood). (3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting). (4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection). (5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification). (6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood). (7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation). Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types): Analysis Description -------------------- Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a coding sequence alignment to determine whether some sites have been subject to pervasive purifying or diversifying selection. v2.1 introduces two more methods for estimating the posterior distribution of grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation Bayes approximation (fastest). Please note that a FUBAR analysis generates a cache and a results JSON file in the same directory as directory as the original alignment. HyPhy needs to have write privileges to this directory. For example if the original file is in /home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there will also exist FUBAR-generated files /home/sergei/FUBAR/data/pol.nex.FUBAR.json, /home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide checkpointing so that a partially completed analysis can be restarted. - __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree (one per partition) - __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring selection (2013), Mol Biol Evol. 30(5):1196-205 - __Written by__: Sergei L Kosakovsky Pond - __Contact Information__: spond@temple.edu - __Analysis Version__: 2.1 ####Choose Genetic Code 1. [**Universal**] Universal code. (Genebank transl_table=1). 2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2). 3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3). 4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4). 5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5). 6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6). 7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9). 8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10). 9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12). 10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13). 11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14). 12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15). 13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16). 14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21). 15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22). 16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23). 17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24). 18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25). 19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26). >Please choose an option (or press q to cancel selection): >Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`) >A tree was found in the data file: `(C1,C3,((C2,C5),C4,C6))` >Would you like to use it (y/n)? >Loaded a multiple sequence alignment with **6** sequences, **1376** codons, and **1** partitions from `/data//pss_subsets/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/results/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1.fna` > FUBAR will write cache and result files to _/data//pss_subsets/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/results/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/results/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1/A59_NA_ATN37888_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1.fna.FUBAR.json_, respectively > Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer): ####Posterior estimation method 1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation) 2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed) 3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default) >Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5): ### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model * Log(L) = -7470.92, AIC-c = 14973.85 (16 estimated parameters) * Tree length (expected substitutions/site) for partition 1 : 0.119 ### Computing the phylogenetic likelihood function on the grid * Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid * Best scaling achieved for * synonymous rate = 2.815 * non-synonymous rate = 0.429 * Computing conditional site likelihoods on a 20 x 20 rate grid ### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights * Using the following settings * Dirichlet alpha : 0.5 ### Tabulating site-level results ---- ## FUBAR inferred no sites under subject to positive selection at posterior probability >= 0.9
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
