--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1300.41 -1319.36
2 -1300.43 -1320.87
--------------------------------------
TOTAL -1300.42 -1320.38
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.076140 0.000149 0.053899 0.100009 0.075116 1285.71 1321.69 1.000
r(A<->C){all} 0.137483 0.002801 0.045178 0.238309 0.130978 508.98 551.43 1.001
r(A<->G){all} 0.167082 0.002936 0.068154 0.271167 0.163665 523.71 577.92 1.002
r(A<->T){all} 0.114804 0.001706 0.037762 0.194427 0.111247 831.19 837.75 1.000
r(C<->G){all} 0.106598 0.002084 0.026648 0.193759 0.100501 360.75 463.85 1.002
r(C<->T){all} 0.365612 0.004370 0.235394 0.492322 0.363366 608.89 612.39 1.000
r(G<->T){all} 0.108420 0.001594 0.039431 0.190899 0.103180 655.15 672.56 1.001
pi(A){all} 0.219769 0.000231 0.189476 0.248068 0.219464 954.97 977.78 1.000
pi(C){all} 0.220062 0.000246 0.188979 0.249649 0.219458 1230.66 1235.43 1.000
pi(G){all} 0.232471 0.000261 0.199546 0.262412 0.232373 1096.81 1119.79 1.000
pi(T){all} 0.327699 0.000295 0.295398 0.361517 0.327326 1007.37 1068.95 1.000
alpha{1,2} 0.779644 0.752872 0.000217 2.512613 0.489435 1089.93 1109.33 1.000
alpha{3} 1.444429 1.301131 0.002920 3.812072 1.135705 1104.57 1221.85 1.000
pinvar{all} 0.295641 0.033936 0.000494 0.610508 0.281960 852.94 860.35 1.004
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -1253.190689
Model 2: PositiveSelection -1251.772405
Model 7: beta -1253.209130
Model 8: beta&w>1 -1251.779824
Model 2 vs 1 2.836568
Model 8 vs 7 2.858612
-- Starting log on Thu Nov 17 16:36:16 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result--
-- Starting log on Thu Nov 17 16:38:10 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result--
-- Starting log on Thu Nov 17 22:48:44 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result/gapped_alignment/codeml,LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 30 taxa and 690 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C65
Taxon 2 -> C31
Taxon 3 -> C71
Taxon 4 -> C168
Taxon 5 -> C144
Taxon 6 -> C117
Taxon 7 -> C180
Taxon 8 -> C660
Taxon 9 -> C547
Taxon 10 -> C363
Taxon 11 -> C489
Taxon 12 -> C337
Taxon 13 -> C60
Taxon 14 -> C302
Taxon 15 -> C440
Taxon 16 -> C126
Taxon 17 -> C506
Taxon 18 -> C552
Taxon 19 -> C372
Taxon 20 -> C274
Taxon 21 -> C124
Taxon 22 -> C103
Taxon 23 -> C130
Taxon 24 -> C247
Taxon 25 -> C562
Taxon 26 -> C624
Taxon 27 -> C298
Taxon 28 -> C505
Taxon 29 -> C648
Taxon 30 -> C310
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668725326
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 801734050
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 0469955924
Seed = 1697717626
Swapseed = 1668725326
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 19 unique site patterns
Division 2 has 12 unique site patterns
Division 3 has 27 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -1992.016577 -- 82.122948
Chain 2 -- -1995.539089 -- 82.122948
Chain 3 -- -1995.340067 -- 82.122948
Chain 4 -- -1938.696074 -- 82.122948
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -1971.339804 -- 82.122948
Chain 2 -- -1990.030165 -- 82.122948
Chain 3 -- -1937.841258 -- 82.122948
Chain 4 -- -1876.402737 -- 82.122948
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-1992.017] (-1995.539) (-1995.340) (-1938.696) * [-1971.340] (-1990.030) (-1937.841) (-1876.403)
1000 -- (-1359.465) (-1441.854) [-1334.098] (-1333.253) * (-1360.308) (-1413.979) [-1346.539] (-1349.069) -- 0:16:39
2000 -- (-1322.787) (-1329.761) (-1323.041) [-1317.557] * (-1335.384) (-1318.420) (-1339.646) [-1310.309] -- 0:16:38
3000 -- (-1309.989) (-1321.165) (-1319.383) [-1309.917] * (-1335.010) (-1320.467) [-1317.718] (-1306.426) -- 0:16:37
4000 -- (-1318.970) [-1315.793] (-1317.277) (-1310.098) * (-1332.636) (-1323.660) [-1315.344] (-1310.760) -- 0:16:36
5000 -- (-1313.357) (-1316.233) [-1306.170] (-1315.986) * (-1327.714) (-1319.983) [-1309.344] (-1312.049) -- 0:13:16
Average standard deviation of split frequencies: 0.079016
6000 -- (-1323.794) [-1315.129] (-1332.350) (-1308.748) * (-1320.478) (-1303.164) [-1306.258] (-1311.892) -- 0:13:48
7000 -- (-1326.274) [-1306.871] (-1310.034) (-1317.495) * [-1317.602] (-1318.470) (-1320.992) (-1309.820) -- 0:14:11
8000 -- [-1311.526] (-1312.860) (-1313.633) (-1327.627) * [-1306.684] (-1319.701) (-1322.929) (-1331.447) -- 0:14:28
9000 -- (-1319.185) (-1319.635) [-1313.901] (-1315.772) * [-1302.792] (-1312.314) (-1312.698) (-1307.343) -- 0:14:40
10000 -- (-1310.877) (-1320.119) (-1313.810) [-1304.433] * (-1310.679) [-1313.070] (-1315.847) (-1307.387) -- 0:14:51
Average standard deviation of split frequencies: 0.081410
11000 -- (-1332.197) [-1311.912] (-1313.076) (-1317.998) * (-1315.393) [-1306.175] (-1319.184) (-1313.723) -- 0:13:29
12000 -- (-1328.644) [-1318.683] (-1326.448) (-1313.469) * (-1318.778) (-1315.237) (-1315.698) [-1312.323] -- 0:13:43
13000 -- (-1317.165) [-1315.182] (-1315.396) (-1311.926) * (-1316.821) (-1317.619) (-1322.485) [-1312.211] -- 0:12:39
14000 -- (-1313.597) (-1307.127) (-1310.586) [-1310.635] * (-1308.510) (-1304.908) (-1315.499) [-1309.638] -- 0:12:54
15000 -- (-1310.916) (-1320.590) (-1309.248) [-1305.816] * (-1317.521) [-1303.654] (-1313.577) (-1319.495) -- 0:12:02
Average standard deviation of split frequencies: 0.078140
16000 -- (-1307.999) (-1309.147) (-1308.994) [-1313.317] * (-1309.749) (-1302.119) (-1331.011) [-1304.978] -- 0:12:18
17000 -- (-1318.477) (-1326.566) (-1307.343) [-1304.299] * (-1315.530) [-1308.136] (-1322.492) (-1315.212) -- 0:12:31
18000 -- (-1322.626) (-1304.087) [-1308.169] (-1320.123) * (-1325.430) (-1321.124) (-1319.553) [-1305.696] -- 0:11:49
19000 -- [-1308.851] (-1323.643) (-1312.681) (-1334.241) * (-1320.607) (-1325.772) (-1335.320) [-1305.553] -- 0:12:02
20000 -- [-1309.583] (-1319.105) (-1316.780) (-1316.618) * [-1311.541] (-1343.816) (-1324.044) (-1295.427) -- 0:11:26
Average standard deviation of split frequencies: 0.041818
21000 -- [-1302.416] (-1344.639) (-1317.379) (-1315.044) * (-1319.372) (-1339.429) (-1329.537) [-1309.971] -- 0:11:39
22000 -- (-1313.659) (-1327.792) (-1309.308) [-1308.904] * (-1319.247) (-1313.927) [-1311.481] (-1329.048) -- 0:11:06
23000 -- (-1308.153) (-1322.632) [-1315.764] (-1322.117) * (-1315.888) (-1321.004) [-1314.477] (-1330.940) -- 0:11:19
24000 -- (-1310.734) [-1319.010] (-1310.946) (-1318.879) * (-1319.578) (-1328.585) [-1319.496] (-1324.966) -- 0:11:31
25000 -- [-1314.996] (-1323.381) (-1317.335) (-1311.422) * (-1314.091) [-1317.305] (-1324.198) (-1324.356) -- 0:11:03
Average standard deviation of split frequencies: 0.040992
26000 -- (-1317.930) (-1323.651) [-1320.650] (-1313.512) * (-1315.540) [-1313.391] (-1327.259) (-1318.533) -- 0:11:14
27000 -- (-1309.375) (-1322.397) [-1308.503] (-1311.368) * [-1313.267] (-1307.629) (-1311.682) (-1320.787) -- 0:10:48
28000 -- (-1324.838) [-1306.815] (-1304.586) (-1320.142) * (-1320.557) [-1314.658] (-1310.425) (-1328.369) -- 0:10:59
29000 -- (-1312.852) (-1332.358) (-1309.541) [-1302.879] * [-1306.148] (-1301.933) (-1318.462) (-1326.544) -- 0:10:36
30000 -- (-1307.455) (-1308.546) (-1306.966) [-1308.237] * (-1312.594) [-1310.990] (-1306.377) (-1323.840) -- 0:10:46
Average standard deviation of split frequencies: 0.029346
31000 -- (-1335.620) [-1299.884] (-1317.016) (-1319.100) * [-1316.143] (-1309.236) (-1319.267) (-1317.948) -- 0:10:56
32000 -- (-1317.906) [-1312.955] (-1298.244) (-1314.490) * (-1314.862) (-1308.368) (-1319.008) [-1312.613] -- 0:10:35
33000 -- (-1313.238) (-1313.681) (-1313.123) [-1308.564] * [-1303.565] (-1322.715) (-1311.469) (-1322.624) -- 0:10:44
34000 -- (-1312.040) [-1301.110] (-1318.694) (-1327.567) * (-1314.610) (-1310.659) [-1305.642] (-1314.597) -- 0:10:25
35000 -- [-1302.723] (-1305.292) (-1313.098) (-1312.576) * (-1321.718) [-1303.057] (-1316.312) (-1329.383) -- 0:10:34
Average standard deviation of split frequencies: 0.027499
36000 -- (-1325.691) (-1310.075) [-1307.749] (-1318.073) * (-1317.864) (-1306.595) [-1308.143] (-1308.210) -- 0:10:15
37000 -- [-1315.805] (-1319.087) (-1323.718) (-1315.302) * (-1328.048) (-1311.926) (-1313.620) [-1304.935] -- 0:10:24
38000 -- (-1325.568) (-1305.618) (-1326.124) [-1303.152] * [-1315.070] (-1317.710) (-1316.028) (-1322.207) -- 0:10:07
39000 -- (-1327.279) [-1302.452] (-1321.574) (-1310.830) * (-1313.291) (-1310.781) (-1318.983) [-1310.827] -- 0:10:16
40000 -- (-1322.644) (-1313.924) (-1310.787) [-1309.193] * (-1320.025) (-1308.749) [-1314.476] (-1317.400) -- 0:10:24
Average standard deviation of split frequencies: 0.017388
41000 -- [-1304.883] (-1310.057) (-1308.740) (-1310.122) * (-1315.341) (-1307.840) (-1303.715) [-1300.940] -- 0:10:08
42000 -- (-1313.265) [-1314.804] (-1316.960) (-1316.589) * (-1316.282) [-1309.697] (-1312.842) (-1312.761) -- 0:10:15
43000 -- (-1317.742) (-1312.214) (-1301.177) [-1311.555] * (-1316.425) (-1312.105) (-1317.936) [-1312.898] -- 0:10:00
44000 -- (-1321.228) (-1306.418) [-1306.112] (-1326.486) * (-1318.356) (-1318.112) [-1301.824] (-1308.533) -- 0:10:08
45000 -- (-1331.218) (-1310.550) [-1297.339] (-1315.410) * (-1316.470) (-1327.220) (-1316.146) [-1314.227] -- 0:09:54
Average standard deviation of split frequencies: 0.018446
46000 -- (-1313.597) [-1310.414] (-1306.518) (-1313.369) * (-1318.037) (-1324.233) (-1333.137) [-1304.095] -- 0:10:01
47000 -- (-1318.984) [-1309.450] (-1311.112) (-1315.092) * [-1323.681] (-1308.354) (-1312.129) (-1322.474) -- 0:09:48
48000 -- (-1320.710) (-1307.160) (-1314.356) [-1317.702] * [-1310.220] (-1301.441) (-1313.452) (-1335.877) -- 0:09:55
49000 -- [-1306.090] (-1320.563) (-1307.602) (-1318.343) * [-1301.010] (-1311.441) (-1325.201) (-1315.991) -- 0:09:42
50000 -- (-1311.443) (-1315.192) [-1306.134] (-1315.744) * (-1311.853) (-1318.803) [-1311.727] (-1320.668) -- 0:09:49
Average standard deviation of split frequencies: 0.026051
51000 -- (-1306.204) [-1311.293] (-1312.949) (-1356.344) * (-1312.125) (-1334.436) [-1309.498] (-1311.540) -- 0:09:55
52000 -- (-1321.006) [-1309.162] (-1310.429) (-1323.770) * (-1313.889) (-1339.005) [-1310.000] (-1325.427) -- 0:09:43
53000 -- [-1303.609] (-1315.630) (-1313.961) (-1322.072) * (-1303.358) (-1315.487) [-1299.739] (-1320.659) -- 0:09:49
54000 -- (-1298.106) (-1313.729) [-1307.711] (-1313.378) * [-1306.505] (-1317.622) (-1314.899) (-1321.687) -- 0:09:38
55000 -- [-1308.611] (-1321.826) (-1311.291) (-1317.589) * (-1307.047) (-1314.407) [-1303.133] (-1320.072) -- 0:09:44
Average standard deviation of split frequencies: 0.021045
56000 -- (-1328.400) (-1312.210) [-1307.054] (-1323.170) * (-1314.189) (-1320.914) (-1321.351) [-1307.685] -- 0:09:33
57000 -- (-1331.945) (-1308.288) (-1319.397) [-1311.354] * (-1307.925) (-1323.869) [-1304.194] (-1313.362) -- 0:09:39
58000 -- (-1312.851) [-1307.504] (-1318.637) (-1311.484) * (-1300.642) (-1304.432) [-1314.947] (-1331.206) -- 0:09:28
59000 -- [-1310.324] (-1320.186) (-1316.613) (-1318.046) * [-1299.096] (-1317.757) (-1305.344) (-1316.752) -- 0:09:34
60000 -- (-1314.813) (-1314.780) (-1320.686) [-1301.866] * (-1311.519) (-1325.811) [-1307.033] (-1310.191) -- 0:09:39
Average standard deviation of split frequencies: 0.013987
61000 -- (-1306.182) (-1327.245) [-1305.883] (-1314.746) * [-1312.952] (-1326.002) (-1307.073) (-1313.732) -- 0:09:29
62000 -- (-1309.493) (-1320.795) [-1308.892] (-1307.613) * [-1302.233] (-1321.300) (-1310.061) (-1300.902) -- 0:09:34
63000 -- (-1313.875) (-1327.728) (-1311.577) [-1309.382] * (-1317.413) [-1314.242] (-1325.087) (-1310.567) -- 0:09:25
64000 -- (-1321.845) (-1322.746) [-1315.694] (-1318.306) * (-1334.498) (-1316.274) [-1303.262] (-1309.110) -- 0:09:30
65000 -- [-1318.213] (-1321.809) (-1338.580) (-1320.474) * (-1323.664) (-1326.916) (-1312.103) [-1307.212] -- 0:09:21
Average standard deviation of split frequencies: 0.024999
66000 -- (-1315.201) (-1328.231) (-1319.994) [-1319.179] * (-1324.928) (-1315.259) [-1313.221] (-1312.485) -- 0:09:26
67000 -- [-1311.112] (-1330.327) (-1322.592) (-1305.243) * (-1309.746) (-1312.181) (-1331.339) [-1311.903] -- 0:09:30
68000 -- (-1318.280) (-1321.101) (-1313.161) [-1303.410] * (-1317.909) (-1328.712) [-1311.238] (-1314.187) -- 0:09:21
69000 -- (-1327.617) (-1320.842) (-1328.826) [-1303.718] * (-1311.571) (-1324.079) (-1309.296) [-1312.103] -- 0:09:26
70000 -- (-1321.991) (-1314.975) [-1309.226] (-1312.127) * (-1320.898) (-1313.224) (-1313.757) [-1307.037] -- 0:09:18
Average standard deviation of split frequencies: 0.023348
71000 -- (-1327.542) (-1322.296) [-1315.110] (-1311.646) * [-1303.906] (-1315.585) (-1322.141) (-1320.921) -- 0:09:22
72000 -- [-1304.043] (-1313.249) (-1314.517) (-1314.050) * (-1303.733) (-1326.864) (-1320.715) [-1311.545] -- 0:09:14
73000 -- [-1311.631] (-1328.615) (-1320.348) (-1310.331) * (-1330.675) (-1316.821) [-1313.524] (-1305.946) -- 0:09:18
74000 -- (-1309.853) (-1317.804) [-1309.075] (-1315.521) * [-1313.084] (-1315.255) (-1322.208) (-1322.810) -- 0:09:10
75000 -- (-1318.463) [-1314.171] (-1310.397) (-1306.103) * [-1313.560] (-1316.612) (-1311.642) (-1318.959) -- 0:09:15
Average standard deviation of split frequencies: 0.021709
76000 -- (-1329.965) (-1320.098) (-1306.504) [-1299.443] * (-1317.965) [-1299.110] (-1313.608) (-1312.447) -- 0:09:19
77000 -- (-1319.817) (-1322.143) (-1307.718) [-1309.327] * (-1320.727) (-1307.410) (-1318.181) [-1319.764] -- 0:09:11
78000 -- (-1332.600) (-1311.364) (-1310.806) [-1307.866] * (-1321.619) (-1323.221) [-1304.132] (-1310.209) -- 0:09:15
79000 -- (-1320.338) (-1314.592) (-1315.516) [-1304.347] * (-1315.371) (-1316.842) (-1315.310) [-1314.014] -- 0:09:07
80000 -- (-1308.352) (-1315.922) (-1320.339) [-1311.735] * (-1312.333) (-1306.011) [-1312.620] (-1319.152) -- 0:09:12
Average standard deviation of split frequencies: 0.021038
81000 -- (-1311.083) (-1311.132) [-1310.825] (-1311.231) * (-1320.323) (-1311.991) [-1305.621] (-1305.889) -- 0:09:04
82000 -- (-1313.961) (-1313.190) [-1315.999] (-1313.346) * (-1320.259) [-1302.099] (-1317.479) (-1300.085) -- 0:09:08
83000 -- (-1311.529) (-1312.162) [-1310.378] (-1331.408) * (-1314.117) [-1310.257] (-1313.317) (-1309.964) -- 0:09:12
84000 -- (-1309.918) [-1309.420] (-1333.862) (-1318.673) * (-1315.705) (-1316.869) (-1324.651) [-1303.713] -- 0:09:05
85000 -- [-1311.216] (-1313.717) (-1328.803) (-1323.372) * [-1308.586] (-1309.195) (-1320.278) (-1322.414) -- 0:09:09
Average standard deviation of split frequencies: 0.013155
86000 -- (-1306.894) (-1305.610) (-1324.598) [-1309.444] * (-1306.658) (-1319.026) (-1321.127) [-1306.694] -- 0:09:02
87000 -- (-1310.171) [-1310.105] (-1320.914) (-1313.133) * (-1299.781) (-1315.599) [-1304.826] (-1315.356) -- 0:09:05
88000 -- [-1308.820] (-1312.558) (-1323.449) (-1327.376) * [-1305.524] (-1312.458) (-1318.130) (-1316.497) -- 0:08:58
89000 -- (-1311.278) [-1318.217] (-1307.403) (-1322.490) * (-1312.716) [-1307.195] (-1323.502) (-1322.789) -- 0:09:02
90000 -- (-1312.491) [-1314.812] (-1308.133) (-1334.434) * [-1304.959] (-1302.928) (-1318.350) (-1330.578) -- 0:09:06
Average standard deviation of split frequencies: 0.012478
91000 -- [-1304.445] (-1312.894) (-1312.931) (-1324.359) * (-1314.376) (-1317.048) [-1304.244] (-1321.903) -- 0:08:59
92000 -- (-1317.095) [-1302.399] (-1301.871) (-1336.629) * (-1324.933) (-1310.591) [-1306.861] (-1320.138) -- 0:09:02
93000 -- [-1305.283] (-1314.715) (-1318.554) (-1329.026) * (-1315.054) (-1308.919) [-1303.857] (-1333.792) -- 0:08:56
94000 -- (-1311.297) (-1326.096) [-1307.272] (-1313.693) * (-1320.564) (-1306.769) [-1305.656] (-1310.604) -- 0:08:59
95000 -- (-1310.787) (-1331.044) (-1308.626) [-1312.128] * (-1317.218) (-1318.253) (-1308.623) [-1304.411] -- 0:08:53
Average standard deviation of split frequencies: 0.012767
96000 -- (-1315.617) (-1314.959) [-1306.974] (-1314.107) * [-1307.275] (-1307.084) (-1309.906) (-1314.527) -- 0:08:56
97000 -- [-1309.855] (-1312.990) (-1319.297) (-1311.064) * [-1306.443] (-1322.694) (-1324.826) (-1318.617) -- 0:08:59
98000 -- [-1311.643] (-1315.117) (-1314.680) (-1310.499) * (-1320.643) [-1314.225] (-1322.952) (-1314.431) -- 0:08:53
99000 -- (-1313.519) (-1320.923) [-1309.549] (-1315.695) * (-1304.507) [-1305.721] (-1319.435) (-1314.233) -- 0:08:56
100000 -- (-1306.564) (-1310.021) [-1301.308] (-1312.768) * (-1305.193) (-1326.850) (-1317.632) [-1308.575] -- 0:08:51
Average standard deviation of split frequencies: 0.010771
101000 -- (-1320.209) [-1300.377] (-1317.636) (-1325.157) * (-1311.310) [-1317.460] (-1318.888) (-1318.003) -- 0:08:54
102000 -- (-1316.796) [-1308.150] (-1310.560) (-1315.049) * (-1313.899) (-1313.105) (-1318.455) [-1305.688] -- 0:08:48
103000 -- (-1316.276) [-1311.710] (-1323.055) (-1310.343) * (-1320.283) [-1322.613] (-1314.355) (-1316.879) -- 0:08:51
104000 -- (-1329.568) [-1303.716] (-1316.890) (-1321.820) * (-1317.145) [-1315.395] (-1330.740) (-1315.889) -- 0:08:54
105000 -- (-1317.932) (-1302.558) [-1313.712] (-1318.003) * (-1330.608) [-1310.816] (-1308.605) (-1321.969) -- 0:08:48
Average standard deviation of split frequencies: 0.010673
106000 -- (-1320.788) (-1321.574) (-1318.825) [-1312.603] * (-1315.654) (-1320.797) [-1316.786] (-1311.265) -- 0:08:51
107000 -- (-1308.403) (-1340.049) [-1320.309] (-1321.150) * (-1315.284) [-1302.898] (-1323.270) (-1305.617) -- 0:08:45
108000 -- [-1307.497] (-1318.871) (-1321.347) (-1309.620) * (-1302.511) (-1306.341) (-1325.930) [-1310.423] -- 0:08:48
109000 -- (-1300.852) [-1313.655] (-1320.827) (-1316.086) * (-1307.888) [-1303.374] (-1328.819) (-1318.358) -- 0:08:43
110000 -- (-1311.429) (-1306.354) [-1308.546] (-1324.648) * [-1306.891] (-1317.931) (-1317.182) (-1312.806) -- 0:08:45
Average standard deviation of split frequencies: 0.012779
111000 -- (-1304.911) [-1306.761] (-1320.340) (-1320.516) * (-1315.000) (-1319.663) (-1333.991) [-1305.875] -- 0:08:48
112000 -- (-1312.403) (-1310.586) (-1315.589) [-1310.719] * [-1309.431] (-1317.155) (-1322.161) (-1306.350) -- 0:08:43
113000 -- (-1304.538) [-1309.584] (-1318.169) (-1320.628) * (-1310.663) [-1310.941] (-1323.398) (-1305.182) -- 0:08:45
114000 -- (-1312.180) [-1307.053] (-1318.382) (-1309.725) * [-1301.878] (-1312.252) (-1312.104) (-1312.301) -- 0:08:40
115000 -- [-1307.437] (-1311.052) (-1322.291) (-1324.897) * [-1308.613] (-1312.507) (-1309.112) (-1313.816) -- 0:08:43
Average standard deviation of split frequencies: 0.012598
116000 -- [-1305.349] (-1326.806) (-1314.038) (-1315.621) * (-1311.585) (-1319.343) [-1309.669] (-1312.779) -- 0:08:38
117000 -- [-1302.740] (-1314.130) (-1319.484) (-1313.614) * (-1305.713) (-1314.309) (-1319.074) [-1304.698] -- 0:08:40
118000 -- (-1307.489) [-1298.736] (-1307.988) (-1320.846) * (-1302.005) (-1326.134) (-1322.113) [-1300.454] -- 0:08:35
119000 -- (-1327.611) (-1304.372) [-1308.115] (-1317.792) * [-1314.271] (-1311.614) (-1308.488) (-1313.162) -- 0:08:38
120000 -- (-1313.808) (-1308.935) [-1302.968] (-1308.567) * (-1322.954) (-1302.889) (-1318.687) [-1306.436] -- 0:08:40
Average standard deviation of split frequencies: 0.014845
121000 -- (-1308.307) [-1307.296] (-1320.768) (-1310.005) * (-1303.903) (-1309.907) (-1311.850) [-1308.460] -- 0:08:35
122000 -- [-1304.294] (-1320.713) (-1316.134) (-1308.847) * (-1313.496) (-1312.262) [-1303.263] (-1312.937) -- 0:08:38
123000 -- (-1322.913) (-1310.280) [-1306.924] (-1319.302) * (-1316.559) (-1308.701) [-1308.203] (-1307.750) -- 0:08:33
124000 -- (-1322.504) [-1303.463] (-1314.850) (-1325.093) * (-1311.992) (-1303.874) [-1308.272] (-1314.711) -- 0:08:35
125000 -- (-1321.173) (-1319.171) (-1330.129) [-1311.905] * (-1304.379) [-1299.273] (-1303.859) (-1311.545) -- 0:08:31
Average standard deviation of split frequencies: 0.016836
126000 -- (-1310.248) (-1322.208) (-1314.078) [-1312.931] * (-1318.116) [-1310.119] (-1321.450) (-1311.587) -- 0:08:33
127000 -- [-1312.981] (-1316.741) (-1301.886) (-1327.475) * (-1319.891) [-1301.758] (-1321.529) (-1316.034) -- 0:08:35
128000 -- (-1308.057) (-1313.025) [-1306.472] (-1314.356) * (-1324.267) (-1310.410) [-1311.060] (-1325.355) -- 0:08:30
129000 -- (-1317.071) [-1308.787] (-1311.075) (-1315.757) * (-1304.289) [-1305.746] (-1308.662) (-1321.126) -- 0:08:33
130000 -- (-1319.597) (-1311.422) [-1300.395] (-1320.506) * (-1309.633) (-1311.017) (-1318.030) [-1316.370] -- 0:08:28
Average standard deviation of split frequencies: 0.018760
131000 -- (-1325.293) [-1315.835] (-1322.806) (-1323.764) * (-1322.358) (-1313.567) [-1305.731] (-1309.739) -- 0:08:30
132000 -- (-1338.634) (-1320.137) (-1320.675) [-1307.731] * [-1307.002] (-1317.130) (-1325.055) (-1308.371) -- 0:08:26
133000 -- (-1332.504) (-1327.678) [-1308.428] (-1303.485) * [-1307.131] (-1329.648) (-1307.206) (-1309.942) -- 0:08:28
134000 -- [-1308.128] (-1323.094) (-1309.951) (-1314.752) * (-1318.454) (-1315.802) [-1303.874] (-1316.597) -- 0:08:30
135000 -- (-1315.424) [-1305.509] (-1318.749) (-1315.855) * [-1309.132] (-1307.629) (-1323.843) (-1317.057) -- 0:08:26
Average standard deviation of split frequencies: 0.016984
136000 -- [-1318.728] (-1315.979) (-1316.207) (-1311.026) * (-1311.121) [-1305.928] (-1312.499) (-1333.441) -- 0:08:28
137000 -- (-1319.743) (-1319.382) (-1320.232) [-1307.431] * (-1320.147) [-1295.663] (-1337.416) (-1318.025) -- 0:08:23
138000 -- (-1305.887) (-1317.036) (-1313.334) [-1306.958] * (-1318.138) (-1308.976) [-1315.069] (-1307.819) -- 0:08:25
139000 -- [-1303.969] (-1319.826) (-1311.436) (-1318.443) * (-1315.189) (-1313.729) (-1325.567) [-1311.163] -- 0:08:21
140000 -- (-1312.915) (-1320.173) (-1304.812) [-1311.879] * (-1314.827) (-1304.386) [-1306.858] (-1321.121) -- 0:08:23
Average standard deviation of split frequencies: 0.018097
141000 -- [-1311.015] (-1324.425) (-1304.570) (-1316.001) * [-1307.017] (-1312.908) (-1315.556) (-1312.931) -- 0:08:19
142000 -- [-1313.094] (-1314.589) (-1311.097) (-1318.920) * (-1316.198) (-1315.021) [-1307.331] (-1318.231) -- 0:08:21
143000 -- (-1312.946) (-1322.628) [-1314.500] (-1319.823) * (-1321.170) (-1333.928) (-1297.999) [-1318.201] -- 0:08:23
144000 -- (-1305.371) (-1321.015) [-1299.162] (-1305.819) * (-1315.598) (-1328.570) (-1307.742) [-1310.302] -- 0:08:19
145000 -- [-1295.728] (-1312.984) (-1310.736) (-1329.514) * (-1313.909) (-1312.623) [-1308.267] (-1323.872) -- 0:08:21
Average standard deviation of split frequencies: 0.013238
146000 -- (-1310.885) [-1300.754] (-1316.917) (-1312.960) * (-1313.529) (-1314.416) [-1305.290] (-1328.003) -- 0:08:17
147000 -- (-1322.757) (-1303.469) (-1303.835) [-1298.739] * (-1313.543) (-1300.955) [-1312.533] (-1320.663) -- 0:08:19
148000 -- (-1316.608) [-1306.572] (-1329.530) (-1310.853) * (-1318.657) [-1310.276] (-1321.464) (-1325.284) -- 0:08:15
149000 -- [-1313.114] (-1306.671) (-1317.563) (-1313.310) * (-1308.700) [-1310.630] (-1315.858) (-1315.899) -- 0:08:16
150000 -- [-1305.484] (-1311.153) (-1320.070) (-1319.404) * [-1304.899] (-1310.851) (-1318.351) (-1318.841) -- 0:08:18
Average standard deviation of split frequencies: 0.014392
151000 -- [-1312.228] (-1314.796) (-1317.612) (-1328.118) * (-1312.019) (-1324.440) (-1318.949) [-1303.498] -- 0:08:14
152000 -- (-1307.679) [-1308.166] (-1317.712) (-1331.939) * (-1313.174) (-1313.332) [-1303.952] (-1310.180) -- 0:08:16
153000 -- (-1306.993) [-1306.697] (-1310.282) (-1320.796) * [-1309.270] (-1313.578) (-1308.150) (-1312.033) -- 0:08:12
154000 -- (-1304.373) [-1311.023] (-1307.211) (-1313.028) * (-1318.294) (-1320.466) [-1298.674] (-1320.692) -- 0:08:14
155000 -- [-1303.333] (-1324.688) (-1300.086) (-1319.603) * (-1319.721) [-1306.125] (-1311.671) (-1330.228) -- 0:08:10
Average standard deviation of split frequencies: 0.012087
156000 -- (-1306.393) (-1311.615) [-1305.297] (-1310.479) * (-1321.922) [-1306.037] (-1312.699) (-1329.724) -- 0:08:12
157000 -- (-1318.955) (-1310.269) [-1304.485] (-1316.576) * [-1313.291] (-1310.736) (-1311.236) (-1329.896) -- 0:08:08
158000 -- [-1304.422] (-1320.702) (-1315.042) (-1326.437) * (-1310.166) [-1310.980] (-1317.665) (-1311.694) -- 0:08:10
159000 -- (-1316.199) (-1313.338) [-1310.191] (-1306.996) * [-1305.954] (-1328.575) (-1318.060) (-1307.374) -- 0:08:11
160000 -- (-1315.188) [-1307.826] (-1303.294) (-1333.381) * (-1303.272) (-1326.508) [-1312.950] (-1312.092) -- 0:08:08
Average standard deviation of split frequencies: 0.012030
161000 -- [-1306.324] (-1322.980) (-1302.440) (-1331.573) * (-1301.016) [-1317.100] (-1313.346) (-1317.836) -- 0:08:09
162000 -- [-1309.092] (-1318.771) (-1311.502) (-1326.272) * (-1312.108) (-1318.735) [-1302.575] (-1314.422) -- 0:08:06
163000 -- (-1312.930) [-1301.562] (-1321.794) (-1329.211) * (-1307.756) (-1315.719) [-1314.237] (-1338.982) -- 0:08:07
164000 -- (-1330.512) [-1304.351] (-1305.215) (-1327.592) * [-1303.546] (-1318.648) (-1316.868) (-1318.394) -- 0:08:04
165000 -- (-1338.968) [-1301.566] (-1315.503) (-1335.123) * [-1310.066] (-1315.090) (-1303.936) (-1319.147) -- 0:08:05
Average standard deviation of split frequencies: 0.010791
166000 -- (-1320.012) [-1306.979] (-1312.722) (-1324.116) * (-1312.441) (-1310.700) [-1304.553] (-1311.866) -- 0:08:07
167000 -- [-1307.959] (-1315.479) (-1316.248) (-1307.836) * (-1308.586) (-1303.950) (-1336.610) [-1305.815] -- 0:08:03
168000 -- [-1320.152] (-1305.857) (-1309.413) (-1330.357) * (-1317.000) (-1326.655) (-1316.770) [-1300.636] -- 0:08:05
169000 -- (-1310.444) (-1316.926) [-1303.719] (-1336.021) * (-1312.528) [-1302.883] (-1308.816) (-1328.702) -- 0:08:01
170000 -- (-1312.232) (-1322.202) [-1306.639] (-1329.628) * (-1311.928) (-1307.583) [-1305.628] (-1323.738) -- 0:08:03
Average standard deviation of split frequencies: 0.007458
171000 -- (-1307.735) [-1299.854] (-1309.163) (-1311.058) * [-1311.942] (-1318.490) (-1326.661) (-1325.420) -- 0:07:59
172000 -- [-1305.102] (-1301.841) (-1318.559) (-1322.611) * (-1307.014) [-1304.367] (-1318.304) (-1313.535) -- 0:08:01
173000 -- (-1317.653) (-1313.101) (-1323.333) [-1323.166] * [-1306.494] (-1320.588) (-1313.567) (-1322.847) -- 0:07:58
174000 -- (-1309.313) [-1305.735] (-1317.525) (-1313.847) * (-1321.157) (-1328.550) (-1312.785) [-1314.458] -- 0:07:59
175000 -- (-1311.346) (-1305.087) (-1315.020) [-1312.093] * (-1315.263) [-1306.165] (-1327.781) (-1317.190) -- 0:07:56
Average standard deviation of split frequencies: 0.006964
176000 -- (-1318.013) (-1305.767) (-1316.077) [-1306.221] * (-1311.495) (-1312.692) [-1303.301] (-1323.239) -- 0:07:57
177000 -- [-1310.047] (-1323.123) (-1323.994) (-1318.577) * (-1313.898) (-1322.270) (-1320.108) [-1319.275] -- 0:07:58
178000 -- (-1322.779) (-1315.919) (-1326.044) [-1314.721] * (-1311.355) [-1313.262] (-1324.028) (-1321.038) -- 0:07:55
179000 -- (-1326.371) [-1302.153] (-1320.104) (-1316.231) * [-1308.782] (-1306.838) (-1317.775) (-1315.695) -- 0:07:57
180000 -- (-1315.230) [-1318.272] (-1314.981) (-1322.529) * (-1317.465) (-1307.923) (-1313.823) [-1314.911] -- 0:07:53
Average standard deviation of split frequencies: 0.007567
181000 -- (-1308.196) (-1323.583) (-1306.870) [-1307.525] * [-1313.073] (-1315.045) (-1303.666) (-1305.501) -- 0:07:55
182000 -- (-1319.780) (-1331.800) [-1304.541] (-1317.701) * (-1319.241) (-1318.338) (-1310.250) [-1305.416] -- 0:07:51
183000 -- (-1333.621) (-1324.023) (-1330.611) [-1311.703] * (-1312.639) (-1334.776) (-1304.599) [-1301.019] -- 0:07:53
184000 -- (-1320.878) (-1317.497) [-1313.404] (-1327.981) * (-1300.636) (-1312.776) (-1323.775) [-1305.555] -- 0:07:54
185000 -- (-1311.941) (-1316.547) (-1313.817) [-1315.622] * (-1307.069) (-1328.532) [-1311.234] (-1321.473) -- 0:07:51
Average standard deviation of split frequencies: 0.006843
186000 -- (-1341.296) [-1309.945] (-1306.780) (-1318.669) * (-1314.937) (-1325.713) (-1306.126) [-1306.070] -- 0:07:52
187000 -- (-1324.975) [-1304.144] (-1315.228) (-1319.319) * (-1313.494) (-1338.800) [-1309.253] (-1316.544) -- 0:07:49
188000 -- (-1322.593) [-1299.731] (-1311.797) (-1335.662) * [-1305.281] (-1325.331) (-1312.425) (-1317.646) -- 0:07:50
189000 -- (-1322.837) [-1302.241] (-1321.925) (-1320.492) * (-1325.492) (-1327.082) (-1320.410) [-1312.565] -- 0:07:47
190000 -- [-1316.410] (-1309.727) (-1301.752) (-1325.610) * (-1311.534) [-1315.934] (-1322.764) (-1306.729) -- 0:07:48
Average standard deviation of split frequencies: 0.006923
191000 -- (-1338.571) (-1312.585) [-1306.218] (-1338.396) * (-1309.751) (-1313.376) (-1318.319) [-1305.016] -- 0:07:50
192000 -- (-1323.493) (-1308.463) [-1315.485] (-1327.513) * [-1310.049] (-1315.181) (-1316.787) (-1304.633) -- 0:07:47
193000 -- (-1323.481) [-1316.602] (-1307.504) (-1333.547) * (-1312.983) (-1323.084) (-1309.409) [-1302.302] -- 0:07:48
194000 -- [-1307.585] (-1317.995) (-1313.446) (-1299.989) * (-1305.366) (-1320.457) [-1307.684] (-1304.949) -- 0:07:45
195000 -- (-1316.719) (-1313.678) [-1308.980] (-1307.424) * [-1308.890] (-1326.378) (-1320.377) (-1311.941) -- 0:07:46
Average standard deviation of split frequencies: 0.007696
196000 -- (-1321.297) (-1326.790) (-1315.410) [-1311.531] * (-1317.131) (-1313.619) [-1309.619] (-1316.040) -- 0:07:43
197000 -- (-1312.771) [-1304.100] (-1318.448) (-1310.499) * (-1310.062) (-1319.085) [-1306.731] (-1310.327) -- 0:07:44
198000 -- (-1322.068) (-1313.598) (-1315.091) [-1306.919] * (-1321.323) (-1327.290) (-1309.179) [-1308.060] -- 0:07:41
199000 -- (-1320.792) [-1306.065] (-1314.752) (-1308.070) * (-1316.855) [-1313.210] (-1307.790) (-1311.672) -- 0:07:42
200000 -- [-1308.542] (-1318.479) (-1318.579) (-1316.584) * (-1311.923) (-1320.685) [-1305.914] (-1319.430) -- 0:07:44
Average standard deviation of split frequencies: 0.010336
201000 -- (-1320.163) (-1320.562) (-1318.426) [-1311.235] * (-1307.247) (-1316.240) [-1312.199] (-1317.900) -- 0:07:41
202000 -- (-1306.176) (-1318.062) (-1326.892) [-1316.712] * (-1315.738) (-1315.622) [-1306.496] (-1326.384) -- 0:07:42
203000 -- (-1317.612) (-1323.386) [-1309.539] (-1320.932) * (-1319.631) [-1316.488] (-1309.417) (-1317.474) -- 0:07:39
204000 -- (-1317.170) (-1319.839) [-1310.137] (-1314.720) * [-1319.878] (-1322.768) (-1310.131) (-1318.900) -- 0:07:40
205000 -- (-1325.689) (-1323.365) [-1313.827] (-1301.561) * (-1335.954) [-1316.933] (-1301.898) (-1323.155) -- 0:07:37
Average standard deviation of split frequencies: 0.008925
206000 -- (-1319.734) (-1325.936) (-1307.342) [-1302.510] * [-1308.570] (-1311.888) (-1319.412) (-1309.988) -- 0:07:38
207000 -- (-1306.778) (-1319.423) (-1311.088) [-1304.994] * (-1319.791) (-1314.751) [-1310.699] (-1329.480) -- 0:07:39
208000 -- (-1313.157) (-1338.939) (-1306.199) [-1320.080] * (-1326.420) (-1308.280) (-1310.771) [-1316.589] -- 0:07:36
209000 -- (-1305.360) (-1327.491) (-1313.286) [-1307.883] * (-1327.900) (-1314.663) (-1317.661) [-1304.515] -- 0:07:37
210000 -- [-1309.748] (-1316.275) (-1331.754) (-1326.619) * (-1311.909) (-1306.499) [-1305.952] (-1311.689) -- 0:07:35
Average standard deviation of split frequencies: 0.010517
211000 -- (-1306.443) (-1324.015) [-1305.198] (-1311.518) * (-1304.118) [-1305.615] (-1316.201) (-1308.714) -- 0:07:36
212000 -- (-1309.790) [-1313.610] (-1320.858) (-1317.393) * (-1309.239) (-1315.194) (-1320.842) [-1310.664] -- 0:07:33
213000 -- (-1315.184) (-1305.780) (-1319.145) [-1314.337] * [-1304.916] (-1306.567) (-1308.530) (-1310.523) -- 0:07:34
214000 -- (-1309.979) [-1305.839] (-1304.508) (-1313.596) * [-1302.452] (-1302.521) (-1320.779) (-1316.200) -- 0:07:35
215000 -- (-1308.901) (-1311.706) [-1308.017] (-1324.253) * (-1328.217) (-1311.623) [-1312.797] (-1329.376) -- 0:07:32
Average standard deviation of split frequencies: 0.010039
216000 -- (-1318.722) [-1310.640] (-1314.683) (-1315.208) * (-1319.151) [-1310.220] (-1317.661) (-1320.773) -- 0:07:33
217000 -- (-1313.017) (-1301.400) [-1325.442] (-1314.539) * (-1326.937) [-1314.364] (-1311.183) (-1315.347) -- 0:07:31
218000 -- [-1307.187] (-1306.081) (-1320.270) (-1308.217) * (-1331.782) (-1313.053) [-1313.399] (-1314.090) -- 0:07:31
219000 -- [-1310.729] (-1321.870) (-1312.013) (-1312.235) * [-1308.007] (-1313.146) (-1312.265) (-1307.953) -- 0:07:29
220000 -- (-1321.666) (-1315.240) (-1316.641) [-1307.605] * [-1308.058] (-1325.368) (-1314.631) (-1310.901) -- 0:07:30
Average standard deviation of split frequencies: 0.009400
221000 -- [-1304.302] (-1318.368) (-1319.548) (-1321.446) * (-1305.892) (-1313.598) [-1310.120] (-1319.179) -- 0:07:31
222000 -- [-1308.285] (-1318.212) (-1331.576) (-1309.858) * (-1311.889) [-1307.317] (-1310.366) (-1328.927) -- 0:07:28
223000 -- (-1309.618) [-1312.642] (-1314.701) (-1317.317) * (-1315.909) (-1312.029) (-1313.898) [-1312.806] -- 0:07:29
224000 -- [-1307.054] (-1308.815) (-1303.937) (-1299.394) * (-1309.535) (-1319.602) [-1307.392] (-1325.640) -- 0:07:26
225000 -- (-1316.024) (-1316.443) (-1320.388) [-1308.701] * (-1307.940) (-1307.584) [-1311.595] (-1321.998) -- 0:07:27
Average standard deviation of split frequencies: 0.006883
226000 -- (-1304.605) (-1320.655) (-1305.481) [-1309.632] * (-1306.120) [-1306.641] (-1321.593) (-1304.952) -- 0:07:25
227000 -- (-1324.191) (-1317.393) [-1309.912] (-1314.369) * (-1307.713) (-1311.946) [-1313.861] (-1315.603) -- 0:07:26
228000 -- (-1316.108) (-1321.795) [-1304.464] (-1311.209) * [-1306.887] (-1318.697) (-1335.372) (-1302.498) -- 0:07:26
229000 -- (-1318.207) [-1318.978] (-1302.645) (-1310.238) * (-1324.963) [-1307.741] (-1320.085) (-1314.805) -- 0:07:24
230000 -- (-1313.168) [-1311.919] (-1308.516) (-1310.237) * (-1320.702) (-1315.964) (-1315.305) [-1312.992] -- 0:07:25
Average standard deviation of split frequencies: 0.008175
231000 -- (-1314.460) (-1310.831) (-1311.645) [-1303.779] * (-1323.044) (-1309.220) (-1320.795) [-1301.942] -- 0:07:22
232000 -- (-1313.815) [-1316.829] (-1301.837) (-1307.815) * (-1313.074) [-1313.143] (-1313.696) (-1302.976) -- 0:07:23
233000 -- [-1300.905] (-1313.727) (-1315.170) (-1315.156) * (-1311.364) (-1307.447) (-1306.130) [-1302.891] -- 0:07:21
234000 -- [-1306.567] (-1320.735) (-1314.079) (-1306.581) * (-1313.369) (-1320.584) [-1308.294] (-1302.675) -- 0:07:21
235000 -- (-1310.437) [-1316.299] (-1312.806) (-1318.845) * [-1310.765] (-1322.064) (-1315.875) (-1312.553) -- 0:07:22
Average standard deviation of split frequencies: 0.009188
236000 -- [-1299.481] (-1315.561) (-1312.673) (-1321.477) * (-1322.065) (-1303.598) (-1314.507) [-1302.664] -- 0:07:20
237000 -- (-1308.987) [-1305.907] (-1308.931) (-1324.663) * (-1315.779) (-1310.483) (-1313.835) [-1306.401] -- 0:07:21
238000 -- (-1315.227) [-1302.225] (-1309.728) (-1324.403) * (-1311.793) [-1311.016] (-1304.726) (-1320.754) -- 0:07:18
239000 -- (-1330.241) [-1305.614] (-1313.322) (-1306.748) * (-1321.171) [-1307.702] (-1315.826) (-1313.019) -- 0:07:19
240000 -- (-1310.485) [-1314.120] (-1317.075) (-1311.470) * (-1328.513) [-1301.593] (-1306.908) (-1315.701) -- 0:07:17
Average standard deviation of split frequencies: 0.007835
241000 -- (-1338.326) (-1313.814) (-1320.100) [-1310.528] * (-1329.710) [-1307.172] (-1310.219) (-1327.622) -- 0:07:17
242000 -- (-1331.970) (-1304.399) [-1310.846] (-1332.722) * (-1321.400) (-1306.283) (-1308.693) [-1312.340] -- 0:07:18
243000 -- (-1320.377) (-1313.044) [-1313.044] (-1328.697) * (-1320.156) [-1309.144] (-1315.309) (-1310.339) -- 0:07:19
244000 -- (-1308.948) [-1316.106] (-1321.838) (-1334.921) * (-1305.550) [-1309.523] (-1309.036) (-1326.318) -- 0:07:19
245000 -- (-1310.778) [-1310.097] (-1316.714) (-1328.208) * [-1306.540] (-1315.279) (-1314.166) (-1321.280) -- 0:07:20
Average standard deviation of split frequencies: 0.010348
246000 -- (-1312.288) (-1329.478) [-1311.713] (-1315.177) * [-1311.459] (-1305.413) (-1308.286) (-1320.951) -- 0:07:21
247000 -- (-1314.006) (-1320.187) (-1315.921) [-1316.642] * [-1311.936] (-1319.917) (-1308.834) (-1315.176) -- 0:07:18
248000 -- (-1322.109) (-1308.039) (-1314.634) [-1312.497] * (-1327.952) [-1296.690] (-1320.181) (-1312.796) -- 0:07:19
249000 -- (-1322.127) (-1317.959) (-1319.517) [-1306.588] * (-1317.445) [-1301.680] (-1309.327) (-1318.696) -- 0:07:20
250000 -- [-1310.109] (-1324.727) (-1317.682) (-1322.415) * (-1316.021) [-1311.533] (-1319.322) (-1308.649) -- 0:07:21
Average standard deviation of split frequencies: 0.010531
251000 -- (-1312.042) (-1319.445) [-1313.307] (-1323.880) * (-1315.888) (-1310.018) (-1324.935) [-1304.905] -- 0:07:21
252000 -- (-1307.970) (-1318.217) [-1310.368] (-1334.451) * [-1299.325] (-1313.448) (-1307.794) (-1308.918) -- 0:07:22
253000 -- (-1316.347) (-1314.686) (-1303.129) [-1316.317] * [-1304.026] (-1334.552) (-1314.312) (-1318.588) -- 0:07:22
254000 -- (-1322.747) [-1310.403] (-1313.511) (-1321.537) * (-1305.002) (-1332.190) [-1312.817] (-1313.499) -- 0:07:23
255000 -- (-1319.944) (-1308.838) [-1308.866] (-1318.913) * (-1310.276) (-1305.024) [-1318.004] (-1308.665) -- 0:07:21
Average standard deviation of split frequencies: 0.010128
256000 -- (-1313.975) (-1311.480) [-1307.574] (-1329.581) * (-1320.404) (-1319.395) [-1305.803] (-1305.260) -- 0:07:21
257000 -- (-1307.846) (-1318.241) [-1308.806] (-1310.254) * (-1312.225) (-1306.176) [-1314.569] (-1313.165) -- 0:07:22
258000 -- (-1308.121) (-1340.473) [-1314.213] (-1311.861) * [-1302.069] (-1336.482) (-1309.153) (-1321.218) -- 0:07:22
259000 -- (-1328.899) (-1327.130) [-1312.031] (-1325.769) * (-1312.219) (-1317.515) [-1303.992] (-1310.779) -- 0:07:23
260000 -- (-1314.044) [-1312.059] (-1322.973) (-1324.987) * (-1309.273) [-1310.266] (-1316.395) (-1306.540) -- 0:07:23
Average standard deviation of split frequencies: 0.011032
261000 -- (-1307.471) (-1307.122) [-1307.238] (-1334.696) * (-1329.011) (-1309.640) (-1325.636) [-1306.904] -- 0:07:24
262000 -- (-1330.486) [-1298.499] (-1317.289) (-1320.994) * (-1317.496) (-1303.552) (-1316.741) [-1308.722] -- 0:07:22
263000 -- (-1313.294) [-1307.652] (-1318.018) (-1313.912) * (-1325.452) [-1311.583] (-1320.741) (-1309.514) -- 0:07:22
264000 -- [-1316.905] (-1314.479) (-1315.420) (-1310.390) * (-1321.255) [-1310.546] (-1319.598) (-1311.807) -- 0:07:23
265000 -- (-1311.332) [-1314.590] (-1328.832) (-1319.728) * [-1306.573] (-1319.894) (-1324.685) (-1320.506) -- 0:07:23
Average standard deviation of split frequencies: 0.011874
266000 -- (-1315.941) (-1302.868) (-1312.599) [-1311.717] * (-1311.606) [-1312.640] (-1317.857) (-1329.484) -- 0:07:24
267000 -- (-1311.316) [-1310.544] (-1328.045) (-1324.687) * (-1315.761) (-1314.851) [-1311.791] (-1326.082) -- 0:07:21
268000 -- (-1316.295) (-1310.738) (-1316.134) [-1311.154] * (-1309.125) (-1317.777) [-1306.920] (-1319.076) -- 0:07:22
269000 -- (-1314.556) [-1318.598] (-1306.104) (-1310.467) * (-1302.431) (-1322.276) [-1304.185] (-1308.945) -- 0:07:20
270000 -- (-1309.569) (-1320.669) [-1309.725] (-1305.910) * (-1335.293) (-1302.780) [-1300.131] (-1312.883) -- 0:07:20
Average standard deviation of split frequencies: 0.010624
271000 -- (-1324.289) [-1304.068] (-1327.803) (-1306.337) * (-1322.562) (-1312.019) [-1317.448] (-1307.093) -- 0:07:21
272000 -- (-1327.710) (-1304.602) (-1349.346) [-1307.521] * (-1321.547) (-1312.146) (-1315.148) [-1300.624] -- 0:07:18
273000 -- (-1320.337) [-1308.281] (-1317.167) (-1308.084) * (-1316.102) (-1308.122) (-1314.049) [-1305.487] -- 0:07:19
274000 -- (-1323.546) (-1316.667) (-1307.523) [-1301.429] * (-1319.808) [-1307.773] (-1323.919) (-1314.914) -- 0:07:17
275000 -- (-1331.979) (-1317.576) (-1309.650) [-1300.409] * (-1317.314) (-1306.585) [-1310.859] (-1310.206) -- 0:07:17
Average standard deviation of split frequencies: 0.010077
276000 -- (-1318.532) (-1319.302) (-1321.222) [-1304.417] * [-1311.356] (-1320.807) (-1313.530) (-1316.471) -- 0:07:15
277000 -- (-1323.782) [-1305.822] (-1315.460) (-1319.396) * (-1326.179) (-1315.554) [-1306.586] (-1320.033) -- 0:07:15
278000 -- (-1318.867) [-1311.543] (-1315.459) (-1315.600) * (-1318.183) (-1320.091) [-1310.476] (-1320.555) -- 0:07:16
279000 -- (-1320.301) (-1314.730) [-1304.041] (-1311.932) * (-1316.636) [-1305.820] (-1303.524) (-1311.145) -- 0:07:14
280000 -- (-1313.891) [-1304.570] (-1319.472) (-1322.137) * (-1307.176) (-1309.324) (-1307.926) [-1306.271] -- 0:07:14
Average standard deviation of split frequencies: 0.011421
281000 -- (-1305.003) (-1306.222) [-1306.757] (-1318.875) * (-1315.363) (-1320.813) (-1315.525) [-1309.815] -- 0:07:12
282000 -- (-1314.576) (-1313.353) [-1302.814] (-1310.738) * [-1311.256] (-1314.187) (-1311.120) (-1306.197) -- 0:07:12
283000 -- (-1317.410) (-1326.271) [-1310.387] (-1309.636) * (-1310.328) (-1317.456) (-1350.465) [-1316.592] -- 0:07:10
284000 -- (-1307.850) [-1305.123] (-1308.077) (-1308.526) * (-1312.306) [-1307.249] (-1336.860) (-1314.142) -- 0:07:11
285000 -- (-1315.165) (-1303.024) [-1313.971] (-1324.171) * [-1302.572] (-1319.425) (-1312.322) (-1316.538) -- 0:07:08
Average standard deviation of split frequencies: 0.011373
286000 -- (-1307.000) (-1307.141) [-1315.630] (-1316.261) * (-1306.128) (-1315.054) (-1309.422) [-1317.710] -- 0:07:09
287000 -- (-1306.035) [-1302.812] (-1322.375) (-1314.842) * (-1302.373) [-1305.334] (-1317.422) (-1332.182) -- 0:07:09
288000 -- (-1321.186) (-1313.030) [-1315.642] (-1311.874) * (-1299.031) [-1301.323] (-1323.390) (-1328.833) -- 0:07:07
289000 -- (-1306.470) (-1319.654) (-1310.458) [-1310.507] * (-1315.247) (-1326.511) [-1313.991] (-1324.877) -- 0:07:08
290000 -- (-1308.904) (-1311.245) [-1321.902] (-1322.777) * [-1312.228] (-1318.453) (-1312.217) (-1319.778) -- 0:07:05
Average standard deviation of split frequencies: 0.012164
291000 -- [-1312.216] (-1310.661) (-1320.428) (-1327.268) * [-1311.629] (-1313.358) (-1317.909) (-1314.121) -- 0:07:06
292000 -- (-1320.709) (-1305.644) [-1304.284] (-1323.134) * (-1317.883) [-1309.868] (-1343.788) (-1312.962) -- 0:07:04
293000 -- (-1328.442) [-1309.275] (-1319.390) (-1329.407) * (-1310.784) (-1302.153) [-1312.219] (-1307.601) -- 0:07:04
294000 -- (-1324.608) (-1315.079) [-1320.158] (-1320.049) * (-1307.942) (-1309.579) [-1303.810] (-1324.032) -- 0:07:05
295000 -- (-1322.842) [-1313.209] (-1310.199) (-1341.887) * (-1318.022) (-1304.775) [-1300.253] (-1316.544) -- 0:07:02
Average standard deviation of split frequencies: 0.011307
296000 -- (-1311.381) (-1320.808) (-1302.273) [-1305.582] * (-1309.734) (-1304.604) [-1313.508] (-1322.517) -- 0:07:03
297000 -- (-1306.860) [-1309.976] (-1311.086) (-1315.609) * (-1308.411) (-1319.069) [-1301.434] (-1332.361) -- 0:07:01
298000 -- [-1304.893] (-1301.281) (-1316.148) (-1320.978) * [-1310.963] (-1323.880) (-1304.453) (-1325.204) -- 0:07:01
299000 -- (-1315.130) [-1304.746] (-1320.709) (-1322.499) * (-1312.876) (-1325.081) [-1304.559] (-1309.437) -- 0:06:59
300000 -- (-1313.963) [-1314.248] (-1314.593) (-1326.644) * (-1327.506) (-1307.122) (-1316.130) [-1305.166] -- 0:06:59
Average standard deviation of split frequencies: 0.010975
301000 -- (-1319.876) (-1318.793) [-1305.189] (-1326.230) * (-1321.539) [-1309.895] (-1318.807) (-1308.411) -- 0:07:00
302000 -- (-1312.560) [-1314.851] (-1306.849) (-1327.286) * (-1318.503) (-1310.931) (-1327.117) [-1313.377] -- 0:06:58
303000 -- [-1298.361] (-1313.475) (-1309.440) (-1323.522) * [-1316.577] (-1324.766) (-1323.360) (-1314.032) -- 0:06:58
304000 -- [-1303.117] (-1332.036) (-1317.235) (-1306.803) * (-1316.758) (-1341.383) (-1313.257) [-1302.746] -- 0:06:56
305000 -- (-1315.598) (-1321.918) (-1304.503) [-1307.996] * (-1314.867) (-1331.213) (-1315.102) [-1306.198] -- 0:06:56
Average standard deviation of split frequencies: 0.009397
306000 -- [-1314.145] (-1326.918) (-1317.455) (-1317.855) * (-1320.692) (-1327.014) [-1317.731] (-1310.210) -- 0:06:55
307000 -- (-1316.032) (-1324.757) (-1302.889) [-1304.538] * (-1307.039) (-1325.657) (-1328.974) [-1304.474] -- 0:06:55
308000 -- [-1310.872] (-1319.640) (-1309.192) (-1322.500) * (-1311.215) (-1314.896) (-1318.741) [-1305.146] -- 0:06:53
309000 -- (-1319.105) (-1319.076) [-1309.896] (-1309.365) * [-1307.799] (-1307.562) (-1322.057) (-1306.764) -- 0:06:53
310000 -- (-1319.544) (-1326.552) (-1309.186) [-1308.802] * (-1306.785) [-1299.690] (-1311.237) (-1335.952) -- 0:06:53
Average standard deviation of split frequencies: 0.009711
311000 -- (-1306.911) (-1324.041) (-1311.735) [-1296.920] * (-1309.698) [-1307.055] (-1328.295) (-1307.991) -- 0:06:52
312000 -- (-1304.307) (-1324.792) [-1302.527] (-1317.056) * (-1311.714) (-1320.413) (-1327.573) [-1310.727] -- 0:06:52
313000 -- [-1305.401] (-1319.139) (-1309.433) (-1326.365) * [-1305.115] (-1325.778) (-1314.998) (-1313.444) -- 0:06:50
314000 -- (-1306.372) [-1305.262] (-1335.416) (-1311.914) * (-1309.527) (-1316.055) (-1307.978) [-1305.755] -- 0:06:50
315000 -- (-1307.001) (-1312.612) [-1309.921] (-1312.538) * (-1307.115) (-1310.061) (-1315.362) [-1310.197] -- 0:06:48
Average standard deviation of split frequencies: 0.011785
316000 -- (-1303.346) [-1309.357] (-1323.419) (-1312.766) * (-1305.839) (-1309.389) (-1307.699) [-1311.070] -- 0:06:49
317000 -- [-1312.538] (-1313.948) (-1308.689) (-1306.738) * (-1312.103) (-1319.363) [-1304.045] (-1309.204) -- 0:06:49
318000 -- (-1309.583) (-1325.244) [-1300.712] (-1311.622) * (-1320.416) (-1313.480) (-1314.053) [-1308.918] -- 0:06:47
319000 -- (-1314.188) (-1327.153) (-1311.055) [-1312.725] * (-1331.000) (-1317.126) [-1310.566] (-1307.681) -- 0:06:47
320000 -- [-1302.691] (-1328.712) (-1306.771) (-1311.411) * (-1326.914) (-1314.217) (-1318.073) [-1298.726] -- 0:06:45
Average standard deviation of split frequencies: 0.011173
321000 -- (-1328.754) (-1320.283) (-1297.736) [-1303.328] * [-1309.492] (-1315.299) (-1320.128) (-1318.208) -- 0:06:46
322000 -- (-1337.513) [-1317.404] (-1307.834) (-1309.367) * [-1311.988] (-1334.269) (-1312.424) (-1307.124) -- 0:06:44
323000 -- (-1316.404) (-1313.146) (-1313.750) [-1309.747] * [-1318.505] (-1324.980) (-1312.447) (-1307.335) -- 0:06:44
324000 -- (-1320.999) (-1319.191) [-1316.028] (-1311.919) * [-1305.943] (-1314.937) (-1318.130) (-1311.586) -- 0:06:42
325000 -- (-1322.752) (-1316.203) (-1319.826) [-1311.614] * (-1316.440) (-1318.080) (-1322.965) [-1315.852] -- 0:06:42
Average standard deviation of split frequencies: 0.011134
326000 -- (-1322.900) (-1327.059) [-1307.503] (-1311.331) * (-1314.718) [-1304.868] (-1315.716) (-1309.383) -- 0:06:43
327000 -- (-1317.909) (-1324.749) (-1318.694) [-1309.039] * (-1302.799) (-1314.849) [-1300.246] (-1310.972) -- 0:06:43
328000 -- [-1307.845] (-1324.755) (-1318.224) (-1310.733) * [-1302.204] (-1319.711) (-1323.394) (-1307.591) -- 0:06:41
329000 -- (-1307.111) (-1320.365) [-1304.383] (-1321.635) * [-1310.390] (-1322.189) (-1327.344) (-1320.752) -- 0:06:41
330000 -- (-1311.404) [-1311.242] (-1319.605) (-1327.783) * [-1305.113] (-1309.222) (-1309.872) (-1324.889) -- 0:06:39
Average standard deviation of split frequencies: 0.010122
331000 -- (-1324.220) (-1311.205) [-1302.456] (-1323.375) * (-1305.045) (-1319.254) [-1307.607] (-1334.803) -- 0:06:40
332000 -- [-1309.226] (-1321.472) (-1304.550) (-1323.622) * (-1322.400) (-1320.599) (-1310.289) [-1317.990] -- 0:06:38
333000 -- [-1313.418] (-1324.906) (-1315.496) (-1314.191) * (-1314.687) (-1329.799) [-1307.410] (-1320.371) -- 0:06:38
334000 -- (-1321.712) [-1308.986] (-1316.359) (-1305.735) * (-1316.896) (-1324.046) [-1306.631] (-1325.377) -- 0:06:38
335000 -- (-1309.447) [-1300.362] (-1318.960) (-1310.038) * (-1306.592) (-1308.366) [-1305.421] (-1315.154) -- 0:06:37
Average standard deviation of split frequencies: 0.010522
336000 -- [-1309.470] (-1326.444) (-1326.169) (-1307.307) * (-1310.206) (-1311.832) [-1307.642] (-1337.777) -- 0:06:37
337000 -- [-1303.246] (-1324.279) (-1313.197) (-1329.902) * (-1325.029) (-1319.310) (-1316.562) [-1306.551] -- 0:06:35
338000 -- (-1321.285) (-1324.441) (-1309.565) [-1301.749] * (-1313.154) (-1319.648) [-1316.152] (-1311.624) -- 0:06:35
339000 -- (-1308.605) (-1325.686) [-1315.538] (-1314.496) * (-1313.368) [-1314.739] (-1310.391) (-1320.175) -- 0:06:33
340000 -- [-1312.122] (-1328.826) (-1326.861) (-1311.018) * (-1327.030) (-1311.824) (-1312.002) [-1311.980] -- 0:06:34
Average standard deviation of split frequencies: 0.009963
341000 -- (-1317.261) (-1315.566) [-1310.996] (-1310.630) * [-1306.333] (-1313.078) (-1306.746) (-1306.904) -- 0:06:34
342000 -- [-1312.631] (-1329.041) (-1308.126) (-1314.098) * (-1315.254) (-1310.202) [-1311.607] (-1318.116) -- 0:06:32
343000 -- (-1312.071) (-1305.480) (-1321.885) [-1299.253] * (-1311.324) (-1301.816) [-1312.047] (-1314.211) -- 0:06:32
344000 -- [-1318.370] (-1320.193) (-1324.451) (-1307.108) * (-1316.704) [-1308.669] (-1335.694) (-1305.268) -- 0:06:30
345000 -- [-1306.107] (-1321.158) (-1325.648) (-1297.243) * (-1312.908) (-1308.345) (-1323.202) [-1312.873] -- 0:06:31
Average standard deviation of split frequencies: 0.010763
346000 -- (-1314.740) [-1315.805] (-1317.121) (-1310.871) * (-1324.780) (-1308.174) (-1325.869) [-1313.932] -- 0:06:29
347000 -- [-1314.898] (-1311.378) (-1316.679) (-1313.939) * [-1307.333] (-1318.407) (-1321.939) (-1325.512) -- 0:06:29
348000 -- [-1313.493] (-1326.890) (-1313.966) (-1308.031) * (-1315.893) (-1333.881) [-1310.729] (-1309.947) -- 0:06:29
349000 -- (-1313.500) (-1317.765) [-1304.705] (-1324.324) * (-1321.345) (-1319.443) (-1307.600) [-1317.696] -- 0:06:27
350000 -- (-1312.308) (-1317.996) (-1310.147) [-1307.777] * (-1311.033) [-1314.245] (-1315.906) (-1313.286) -- 0:06:28
Average standard deviation of split frequencies: 0.010486
351000 -- (-1325.764) (-1313.142) [-1301.219] (-1313.712) * (-1307.155) (-1315.877) [-1308.814] (-1330.878) -- 0:06:26
352000 -- (-1318.843) (-1318.362) (-1309.105) [-1314.840] * (-1322.136) (-1306.363) [-1308.080] (-1318.271) -- 0:06:26
353000 -- [-1317.885] (-1315.123) (-1302.136) (-1313.402) * (-1317.207) [-1308.647] (-1310.751) (-1312.635) -- 0:06:24
354000 -- [-1322.327] (-1312.791) (-1322.107) (-1315.246) * (-1314.789) (-1310.241) (-1306.907) [-1306.712] -- 0:06:25
355000 -- (-1316.704) [-1312.438] (-1313.006) (-1314.056) * (-1309.110) (-1311.731) [-1305.899] (-1325.538) -- 0:06:23
Average standard deviation of split frequencies: 0.009402
356000 -- (-1302.474) (-1312.439) [-1306.751] (-1320.626) * (-1313.291) (-1315.642) (-1302.452) [-1308.665] -- 0:06:23
357000 -- (-1298.423) [-1303.684] (-1312.281) (-1311.178) * (-1324.633) [-1300.611] (-1305.450) (-1314.037) -- 0:06:23
358000 -- (-1305.930) [-1309.950] (-1316.077) (-1310.952) * (-1315.109) [-1309.385] (-1311.309) (-1316.227) -- 0:06:21
359000 -- (-1312.882) (-1320.920) (-1307.342) [-1310.678] * (-1325.319) (-1311.323) (-1318.431) [-1305.909] -- 0:06:22
360000 -- (-1306.533) (-1322.677) (-1319.556) [-1309.270] * (-1323.297) (-1312.892) [-1303.374] (-1301.993) -- 0:06:20
Average standard deviation of split frequencies: 0.009411
361000 -- (-1314.778) (-1322.496) [-1317.973] (-1328.390) * (-1332.243) (-1316.320) [-1310.526] (-1313.339) -- 0:06:20
362000 -- [-1303.728] (-1326.228) (-1321.149) (-1316.067) * (-1324.672) (-1321.805) (-1311.323) [-1310.422] -- 0:06:18
363000 -- [-1313.190] (-1324.005) (-1317.075) (-1305.408) * (-1324.753) (-1313.214) (-1318.117) [-1304.187] -- 0:06:19
364000 -- (-1321.846) (-1306.605) [-1316.382] (-1334.516) * (-1311.942) (-1325.401) (-1312.131) [-1317.470] -- 0:06:19
365000 -- (-1313.691) [-1303.180] (-1318.574) (-1326.445) * (-1320.002) [-1319.700] (-1319.029) (-1324.836) -- 0:06:17
Average standard deviation of split frequencies: 0.009402
366000 -- (-1307.953) (-1308.603) (-1317.118) [-1309.835] * (-1314.844) (-1308.451) (-1314.125) [-1302.616] -- 0:06:17
367000 -- (-1327.830) [-1313.527] (-1304.649) (-1309.145) * (-1313.940) [-1303.444] (-1304.990) (-1332.027) -- 0:06:16
368000 -- (-1317.598) (-1327.692) [-1307.591] (-1309.085) * (-1307.579) (-1308.066) [-1311.861] (-1324.398) -- 0:06:16
369000 -- [-1305.484] (-1319.614) (-1323.392) (-1319.764) * (-1317.327) [-1312.793] (-1317.282) (-1326.622) -- 0:06:14
370000 -- [-1301.315] (-1327.130) (-1326.390) (-1312.183) * (-1332.745) (-1317.964) [-1312.292] (-1311.426) -- 0:06:14
Average standard deviation of split frequencies: 0.009157
371000 -- (-1306.845) (-1325.229) (-1316.810) [-1301.201] * (-1317.963) (-1316.213) (-1308.293) [-1300.197] -- 0:06:14
372000 -- [-1310.047] (-1319.021) (-1313.093) (-1314.638) * (-1313.567) (-1320.728) (-1311.974) [-1303.245] -- 0:06:13
373000 -- (-1307.686) (-1320.307) (-1304.687) [-1307.076] * (-1319.163) [-1311.319] (-1309.941) (-1316.189) -- 0:06:13
374000 -- (-1311.589) (-1318.517) [-1305.778] (-1303.315) * (-1320.674) [-1308.462] (-1323.613) (-1309.798) -- 0:06:11
375000 -- (-1317.470) (-1322.314) (-1323.318) [-1302.231] * (-1321.722) (-1308.631) [-1309.931] (-1312.184) -- 0:06:11
Average standard deviation of split frequencies: 0.010657
376000 -- [-1301.406] (-1324.024) (-1315.347) (-1310.749) * (-1336.873) [-1312.975] (-1311.974) (-1308.550) -- 0:06:10
377000 -- (-1301.065) (-1324.459) (-1319.260) [-1308.946] * (-1317.194) (-1313.184) [-1309.503] (-1319.078) -- 0:06:10
378000 -- (-1314.856) (-1311.497) (-1315.677) [-1304.108] * [-1316.470] (-1310.232) (-1304.444) (-1314.686) -- 0:06:10
379000 -- [-1306.516] (-1316.721) (-1316.434) (-1305.196) * (-1316.480) (-1318.542) (-1327.823) [-1314.300] -- 0:06:08
380000 -- (-1318.715) (-1318.170) (-1334.633) [-1309.258] * [-1315.213] (-1317.462) (-1314.499) (-1319.673) -- 0:06:08
Average standard deviation of split frequencies: 0.011393
381000 -- (-1314.897) [-1307.940] (-1310.773) (-1323.013) * (-1327.762) [-1306.563] (-1307.458) (-1333.707) -- 0:06:07
382000 -- [-1305.413] (-1307.906) (-1313.905) (-1314.786) * (-1317.811) [-1302.480] (-1310.661) (-1315.076) -- 0:06:07
383000 -- (-1307.817) (-1309.257) [-1303.175] (-1319.897) * (-1330.488) (-1321.895) (-1303.343) [-1305.053] -- 0:06:05
384000 -- [-1313.579] (-1325.571) (-1310.214) (-1310.634) * (-1308.325) (-1318.486) (-1316.473) [-1303.315] -- 0:06:05
385000 -- [-1306.845] (-1316.985) (-1314.218) (-1321.934) * (-1316.337) (-1308.452) (-1307.989) [-1297.328] -- 0:06:04
Average standard deviation of split frequencies: 0.011113
386000 -- (-1316.979) (-1323.094) (-1308.745) [-1304.028] * [-1316.435] (-1317.284) (-1322.882) (-1314.969) -- 0:06:04
387000 -- [-1305.514] (-1308.071) (-1312.048) (-1312.957) * (-1326.129) (-1310.928) (-1308.515) [-1314.617] -- 0:06:04
388000 -- (-1311.273) [-1308.056] (-1315.812) (-1311.268) * (-1311.534) (-1324.103) [-1308.149] (-1310.447) -- 0:06:02
389000 -- [-1312.412] (-1304.632) (-1314.684) (-1323.398) * (-1315.172) (-1311.712) (-1315.101) [-1311.677] -- 0:06:02
390000 -- (-1314.102) [-1306.567] (-1314.520) (-1321.848) * (-1302.779) (-1315.347) (-1317.654) [-1306.763] -- 0:06:01
Average standard deviation of split frequencies: 0.010860
391000 -- (-1325.583) [-1307.489] (-1312.563) (-1326.986) * (-1310.505) (-1333.999) [-1310.130] (-1311.582) -- 0:06:01
392000 -- (-1328.134) [-1311.099] (-1309.640) (-1318.768) * (-1312.479) [-1317.845] (-1316.711) (-1310.409) -- 0:05:59
393000 -- [-1316.226] (-1324.375) (-1317.094) (-1304.630) * (-1303.235) (-1318.645) (-1313.573) [-1310.488] -- 0:05:59
394000 -- (-1312.794) [-1305.317] (-1310.512) (-1307.336) * [-1309.898] (-1319.160) (-1307.966) (-1305.581) -- 0:05:59
395000 -- (-1329.001) (-1312.493) (-1301.914) [-1301.753] * (-1317.364) (-1327.811) [-1308.333] (-1313.706) -- 0:05:58
Average standard deviation of split frequencies: 0.010714
396000 -- (-1313.770) (-1311.626) (-1310.257) [-1299.773] * [-1307.832] (-1324.177) (-1324.241) (-1310.722) -- 0:05:58
397000 -- (-1323.866) [-1299.503] (-1314.724) (-1322.425) * [-1304.880] (-1322.168) (-1317.189) (-1312.162) -- 0:05:56
398000 -- [-1309.262] (-1322.700) (-1318.065) (-1311.233) * [-1306.391] (-1315.864) (-1335.261) (-1323.127) -- 0:05:56
399000 -- (-1308.539) [-1305.030] (-1316.709) (-1309.842) * (-1316.907) [-1305.635] (-1311.169) (-1329.094) -- 0:05:55
400000 -- (-1319.856) (-1316.265) (-1317.454) [-1317.844] * (-1335.919) [-1299.338] (-1312.268) (-1312.822) -- 0:05:55
Average standard deviation of split frequencies: 0.010942
401000 -- (-1312.745) [-1313.651] (-1309.166) (-1315.823) * (-1318.399) [-1306.227] (-1315.372) (-1330.952) -- 0:05:54
402000 -- (-1318.661) (-1304.796) (-1309.096) [-1301.600] * (-1328.000) [-1300.841] (-1311.378) (-1328.768) -- 0:05:54
403000 -- [-1303.884] (-1303.269) (-1312.126) (-1321.807) * (-1334.034) (-1307.196) [-1305.280] (-1322.960) -- 0:05:54
404000 -- (-1307.595) [-1303.986] (-1325.222) (-1311.661) * [-1306.338] (-1312.573) (-1306.869) (-1322.019) -- 0:05:52
405000 -- [-1304.544] (-1312.208) (-1339.532) (-1309.494) * (-1315.652) (-1310.843) [-1306.225] (-1324.568) -- 0:05:52
Average standard deviation of split frequencies: 0.010798
406000 -- [-1307.459] (-1314.664) (-1314.916) (-1326.516) * [-1316.669] (-1311.352) (-1329.050) (-1330.101) -- 0:05:51
407000 -- (-1308.860) [-1310.125] (-1311.257) (-1335.398) * (-1314.996) (-1302.907) (-1314.645) [-1312.136] -- 0:05:51
408000 -- (-1327.077) [-1304.486] (-1312.963) (-1331.444) * (-1333.075) (-1306.937) [-1308.821] (-1322.709) -- 0:05:49
409000 -- (-1321.833) [-1295.979] (-1319.236) (-1314.571) * [-1310.194] (-1323.450) (-1322.619) (-1319.578) -- 0:05:49
410000 -- (-1315.969) [-1305.335] (-1332.538) (-1319.287) * (-1316.627) [-1311.813] (-1307.828) (-1323.557) -- 0:05:48
Average standard deviation of split frequencies: 0.011479
411000 -- (-1314.340) (-1307.209) (-1310.687) [-1314.302] * (-1316.457) [-1309.695] (-1305.823) (-1324.572) -- 0:05:48
412000 -- (-1316.186) (-1311.510) [-1302.108] (-1318.045) * (-1311.140) [-1311.934] (-1312.372) (-1326.909) -- 0:05:48
413000 -- (-1311.900) [-1313.711] (-1315.179) (-1314.228) * [-1312.004] (-1314.658) (-1308.961) (-1336.015) -- 0:05:46
414000 -- (-1315.577) (-1315.682) [-1310.328] (-1310.679) * [-1323.002] (-1314.107) (-1309.150) (-1309.836) -- 0:05:46
415000 -- (-1317.247) [-1304.730] (-1315.914) (-1327.469) * [-1311.614] (-1309.237) (-1308.030) (-1335.445) -- 0:05:45
Average standard deviation of split frequencies: 0.011332
416000 -- (-1318.425) [-1305.239] (-1306.032) (-1328.988) * (-1318.354) (-1320.318) (-1316.024) [-1313.994] -- 0:05:45
417000 -- (-1312.388) [-1305.770] (-1317.944) (-1323.311) * (-1316.252) [-1310.447] (-1302.815) (-1321.565) -- 0:05:43
418000 -- (-1308.740) [-1303.428] (-1316.633) (-1314.550) * (-1314.745) (-1309.181) [-1309.026] (-1317.934) -- 0:05:43
419000 -- (-1309.876) [-1305.463] (-1312.791) (-1316.870) * (-1308.821) (-1319.237) (-1322.106) [-1302.990] -- 0:05:43
420000 -- (-1323.791) [-1311.143] (-1312.911) (-1306.282) * (-1311.309) (-1319.892) (-1316.982) [-1301.877] -- 0:05:42
Average standard deviation of split frequencies: 0.009861
421000 -- (-1304.841) (-1319.144) [-1309.268] (-1304.549) * (-1313.158) [-1307.570] (-1319.830) (-1308.782) -- 0:05:42
422000 -- (-1300.219) [-1315.647] (-1312.201) (-1318.933) * [-1303.769] (-1308.356) (-1318.118) (-1318.839) -- 0:05:41
423000 -- [-1301.830] (-1314.056) (-1311.656) (-1305.854) * (-1300.171) [-1305.800] (-1320.858) (-1318.847) -- 0:05:41
424000 -- [-1316.998] (-1316.903) (-1328.216) (-1315.273) * [-1310.344] (-1299.795) (-1320.113) (-1315.227) -- 0:05:39
425000 -- [-1302.717] (-1305.688) (-1322.966) (-1304.911) * (-1322.259) [-1308.545] (-1335.705) (-1310.656) -- 0:05:39
Average standard deviation of split frequencies: 0.009738
426000 -- (-1307.546) [-1303.599] (-1322.688) (-1317.679) * [-1299.133] (-1332.031) (-1324.644) (-1312.007) -- 0:05:38
427000 -- (-1306.353) [-1305.190] (-1323.416) (-1313.487) * [-1313.908] (-1310.451) (-1336.621) (-1324.630) -- 0:05:38
428000 -- [-1309.838] (-1312.662) (-1317.825) (-1317.298) * (-1315.045) (-1299.338) (-1317.121) [-1304.525] -- 0:05:38
429000 -- [-1303.187] (-1316.968) (-1302.071) (-1309.985) * [-1318.825] (-1310.099) (-1318.339) (-1330.185) -- 0:05:36
430000 -- (-1320.614) (-1315.291) [-1306.601] (-1307.704) * (-1313.298) [-1307.006] (-1311.142) (-1319.862) -- 0:05:36
Average standard deviation of split frequencies: 0.009304
431000 -- (-1317.609) (-1321.137) [-1304.775] (-1315.657) * (-1321.585) (-1319.495) (-1316.923) [-1312.533] -- 0:05:35
432000 -- (-1315.956) (-1319.191) (-1304.306) [-1301.172] * (-1320.245) (-1321.240) (-1311.046) [-1313.259] -- 0:05:35
433000 -- (-1308.359) (-1313.791) [-1304.470] (-1305.524) * [-1308.907] (-1318.398) (-1312.469) (-1312.614) -- 0:05:33
434000 -- (-1300.074) (-1323.604) (-1308.458) [-1314.160] * (-1321.382) [-1307.834] (-1316.596) (-1318.196) -- 0:05:33
435000 -- (-1310.648) (-1336.724) (-1310.847) [-1315.575] * (-1318.713) [-1302.688] (-1310.665) (-1310.096) -- 0:05:32
Average standard deviation of split frequencies: 0.010380
436000 -- [-1304.726] (-1322.625) (-1308.744) (-1319.916) * [-1304.087] (-1315.921) (-1303.374) (-1319.503) -- 0:05:32
437000 -- (-1324.243) [-1314.671] (-1314.757) (-1335.476) * [-1312.135] (-1308.529) (-1310.123) (-1316.394) -- 0:05:32
438000 -- (-1301.404) [-1305.946] (-1315.407) (-1314.219) * [-1309.564] (-1314.583) (-1304.330) (-1310.592) -- 0:05:31
439000 -- [-1305.353] (-1322.355) (-1307.163) (-1325.592) * (-1323.516) (-1325.305) (-1306.999) [-1303.203] -- 0:05:30
440000 -- (-1316.529) (-1326.266) (-1304.666) [-1309.897] * (-1324.413) (-1317.552) (-1310.846) [-1305.953] -- 0:05:29
Average standard deviation of split frequencies: 0.010484
441000 -- (-1313.166) (-1307.590) [-1302.154] (-1310.917) * (-1316.621) (-1324.461) (-1305.897) [-1315.857] -- 0:05:29
442000 -- (-1311.875) [-1304.354] (-1321.449) (-1318.902) * (-1318.035) (-1315.379) (-1309.365) [-1308.140] -- 0:05:28
443000 -- (-1316.904) [-1308.237] (-1312.974) (-1327.666) * (-1316.415) (-1317.032) (-1314.639) [-1309.804] -- 0:05:28
444000 -- (-1317.943) [-1318.659] (-1311.894) (-1318.849) * [-1306.336] (-1309.676) (-1338.444) (-1314.650) -- 0:05:28
445000 -- (-1329.140) [-1312.009] (-1323.544) (-1306.894) * [-1302.573] (-1328.844) (-1310.305) (-1314.467) -- 0:05:28
Average standard deviation of split frequencies: 0.010464
446000 -- [-1307.316] (-1314.461) (-1312.471) (-1306.298) * [-1306.567] (-1319.136) (-1317.524) (-1316.028) -- 0:05:27
447000 -- [-1311.249] (-1314.472) (-1309.988) (-1321.319) * [-1307.396] (-1314.801) (-1320.868) (-1324.557) -- 0:05:27
448000 -- [-1296.844] (-1303.627) (-1309.555) (-1329.755) * [-1312.693] (-1307.267) (-1308.384) (-1322.933) -- 0:05:27
449000 -- [-1306.156] (-1310.348) (-1307.350) (-1316.571) * (-1329.362) [-1301.386] (-1310.027) (-1314.731) -- 0:05:27
450000 -- [-1313.402] (-1309.717) (-1317.712) (-1314.587) * (-1323.288) (-1317.506) (-1304.000) [-1311.021] -- 0:05:26
Average standard deviation of split frequencies: 0.010774
451000 -- (-1312.562) [-1308.758] (-1317.271) (-1315.403) * (-1310.013) (-1315.457) [-1303.413] (-1306.565) -- 0:05:26
452000 -- (-1323.496) (-1311.559) (-1338.368) [-1321.726] * (-1319.199) [-1303.717] (-1315.650) (-1314.498) -- 0:05:26
453000 -- (-1312.887) (-1303.330) (-1330.530) [-1302.291] * (-1310.620) [-1307.240] (-1335.362) (-1332.535) -- 0:05:26
454000 -- (-1329.342) (-1308.032) (-1322.467) [-1305.448] * (-1314.033) [-1307.182] (-1314.778) (-1340.414) -- 0:05:25
455000 -- (-1314.927) (-1327.274) (-1316.569) [-1309.349] * [-1317.208] (-1327.194) (-1308.646) (-1314.742) -- 0:05:25
Average standard deviation of split frequencies: 0.011268
456000 -- [-1307.167] (-1313.554) (-1313.825) (-1317.170) * [-1314.673] (-1311.050) (-1318.327) (-1331.797) -- 0:05:25
457000 -- [-1305.932] (-1317.065) (-1316.231) (-1313.826) * [-1311.515] (-1314.531) (-1305.059) (-1318.481) -- 0:05:25
458000 -- (-1316.480) [-1310.829] (-1313.813) (-1317.709) * (-1317.458) (-1314.536) [-1309.179] (-1330.109) -- 0:05:24
459000 -- (-1316.714) (-1311.707) [-1308.465] (-1320.698) * (-1307.470) (-1337.511) (-1318.066) [-1307.350] -- 0:05:24
460000 -- (-1332.037) (-1318.642) [-1318.506] (-1308.086) * (-1316.835) (-1317.170) (-1322.149) [-1306.593] -- 0:05:24
Average standard deviation of split frequencies: 0.012075
461000 -- (-1308.906) (-1307.047) (-1324.460) [-1309.992] * (-1318.079) [-1307.013] (-1320.163) (-1304.052) -- 0:05:23
462000 -- (-1314.915) (-1312.837) (-1318.821) [-1305.684] * (-1306.721) [-1308.912] (-1315.405) (-1311.556) -- 0:05:23
463000 -- (-1311.274) [-1311.952] (-1322.446) (-1297.285) * [-1315.009] (-1309.516) (-1320.939) (-1310.454) -- 0:05:23
464000 -- [-1314.065] (-1310.739) (-1332.855) (-1310.419) * (-1313.394) (-1313.727) (-1305.744) [-1308.216] -- 0:05:22
465000 -- (-1306.157) (-1327.169) [-1309.677] (-1312.908) * (-1309.133) (-1320.183) [-1307.916] (-1305.277) -- 0:05:22
Average standard deviation of split frequencies: 0.012443
466000 -- [-1312.686] (-1334.979) (-1308.574) (-1325.751) * [-1297.006] (-1328.980) (-1343.365) (-1312.290) -- 0:05:20
467000 -- (-1320.452) (-1325.143) [-1307.569] (-1318.851) * (-1312.763) (-1329.819) (-1322.179) [-1303.254] -- 0:05:20
468000 -- (-1321.297) (-1310.507) [-1315.327] (-1319.662) * [-1307.924] (-1342.468) (-1324.143) (-1309.876) -- 0:05:20
469000 -- (-1322.082) [-1312.642] (-1311.891) (-1317.756) * [-1306.952] (-1329.591) (-1323.671) (-1304.967) -- 0:05:19
470000 -- (-1317.938) [-1315.629] (-1305.108) (-1309.445) * (-1310.196) (-1320.505) [-1324.259] (-1314.721) -- 0:05:19
Average standard deviation of split frequencies: 0.013421
471000 -- (-1317.553) [-1305.569] (-1302.131) (-1310.422) * (-1312.368) [-1316.515] (-1322.590) (-1321.453) -- 0:05:17
472000 -- (-1307.099) (-1318.238) [-1307.484] (-1319.684) * (-1325.219) [-1306.362] (-1326.855) (-1324.111) -- 0:05:17
473000 -- [-1303.961] (-1319.497) (-1314.361) (-1312.910) * [-1304.270] (-1318.710) (-1326.261) (-1311.928) -- 0:05:16
474000 -- (-1309.777) (-1318.056) (-1312.502) [-1306.136] * [-1304.425] (-1316.577) (-1323.348) (-1318.148) -- 0:05:16
475000 -- [-1307.152] (-1310.080) (-1330.593) (-1312.849) * [-1318.403] (-1333.316) (-1317.206) (-1314.004) -- 0:05:15
Average standard deviation of split frequencies: 0.012874
476000 -- (-1304.701) [-1315.325] (-1323.487) (-1320.507) * (-1320.652) (-1322.373) (-1326.889) [-1313.330] -- 0:05:14
477000 -- (-1311.048) (-1307.246) (-1308.090) [-1305.632] * (-1334.059) (-1322.772) (-1313.789) [-1321.165] -- 0:05:14
478000 -- (-1320.890) (-1307.211) (-1310.041) [-1305.362] * (-1328.195) (-1311.649) (-1319.050) [-1312.440] -- 0:05:13
479000 -- (-1334.551) [-1303.308] (-1309.207) (-1309.737) * (-1311.630) [-1309.127] (-1316.807) (-1319.822) -- 0:05:13
480000 -- (-1311.260) (-1323.092) [-1315.108] (-1309.502) * (-1306.570) [-1307.891] (-1317.865) (-1319.231) -- 0:05:12
Average standard deviation of split frequencies: 0.012848
481000 -- (-1315.633) (-1325.072) (-1312.470) [-1302.257] * (-1313.882) (-1301.956) (-1313.324) [-1305.978] -- 0:05:11
482000 -- (-1309.981) (-1309.065) (-1332.322) [-1304.090] * (-1321.450) (-1312.562) [-1314.644] (-1314.966) -- 0:05:10
483000 -- [-1300.288] (-1321.226) (-1303.629) (-1319.313) * (-1305.520) (-1323.404) [-1307.551] (-1306.818) -- 0:05:10
484000 -- (-1315.483) [-1305.879] (-1322.093) (-1335.174) * (-1307.674) (-1322.753) (-1326.571) [-1302.722] -- 0:05:10
485000 -- [-1307.300] (-1311.018) (-1325.255) (-1331.116) * (-1321.796) (-1319.738) (-1313.640) [-1306.464] -- 0:05:09
Average standard deviation of split frequencies: 0.013095
486000 -- [-1305.300] (-1325.583) (-1304.794) (-1321.124) * (-1322.537) [-1301.712] (-1316.216) (-1316.247) -- 0:05:08
487000 -- (-1316.705) (-1314.001) (-1310.975) [-1307.009] * (-1314.401) (-1325.101) (-1325.921) [-1304.853] -- 0:05:07
488000 -- (-1316.087) (-1327.939) [-1312.113] (-1311.927) * [-1317.276] (-1317.214) (-1320.590) (-1310.421) -- 0:05:07
489000 -- (-1311.236) (-1309.378) (-1320.375) [-1304.907] * (-1317.951) (-1302.586) [-1313.023] (-1300.888) -- 0:05:06
490000 -- [-1309.019] (-1328.537) (-1313.612) (-1307.380) * [-1310.909] (-1312.072) (-1311.868) (-1308.332) -- 0:05:06
Average standard deviation of split frequencies: 0.013835
491000 -- (-1311.196) (-1313.767) (-1322.490) [-1306.194] * (-1312.732) (-1311.523) [-1307.662] (-1324.222) -- 0:05:05
492000 -- [-1310.704] (-1308.199) (-1312.017) (-1317.665) * (-1312.076) (-1326.103) [-1305.768] (-1311.931) -- 0:05:04
493000 -- (-1317.074) (-1307.545) [-1308.423] (-1306.088) * (-1318.013) (-1323.735) (-1312.169) [-1303.028] -- 0:05:04
494000 -- (-1331.214) [-1310.641] (-1306.374) (-1310.503) * (-1308.927) (-1320.747) (-1308.745) [-1307.667] -- 0:05:03
495000 -- (-1314.008) (-1312.303) (-1313.226) [-1301.203] * (-1313.751) (-1322.615) (-1321.350) [-1314.462] -- 0:05:03
Average standard deviation of split frequencies: 0.013876
496000 -- [-1304.600] (-1325.322) (-1324.568) (-1319.762) * (-1320.350) (-1321.515) [-1317.075] (-1312.411) -- 0:05:01
497000 -- [-1311.681] (-1314.228) (-1309.541) (-1306.168) * (-1327.994) (-1309.997) (-1311.639) [-1302.124] -- 0:05:01
498000 -- (-1316.203) [-1311.745] (-1326.789) (-1315.516) * (-1322.491) (-1316.741) [-1304.967] (-1316.203) -- 0:05:01
499000 -- [-1305.946] (-1313.262) (-1314.655) (-1313.965) * [-1311.629] (-1317.853) (-1321.231) (-1324.605) -- 0:05:00
500000 -- (-1323.472) [-1308.212] (-1326.589) (-1308.718) * (-1318.942) (-1314.733) [-1312.675] (-1313.006) -- 0:05:00
Average standard deviation of split frequencies: 0.013276
501000 -- (-1327.339) [-1312.535] (-1313.624) (-1312.995) * (-1314.410) (-1319.842) [-1310.402] (-1319.915) -- 0:04:58
502000 -- (-1329.059) (-1319.945) (-1314.451) [-1310.972] * (-1312.899) [-1317.148] (-1322.906) (-1312.250) -- 0:04:58
503000 -- (-1319.670) (-1310.504) (-1326.372) [-1317.108] * (-1305.723) (-1321.654) [-1313.478] (-1321.810) -- 0:04:57
504000 -- (-1318.474) [-1302.030] (-1304.806) (-1324.483) * (-1311.453) (-1336.500) (-1307.717) [-1313.342] -- 0:04:57
505000 -- (-1313.260) (-1311.447) [-1309.620] (-1313.740) * (-1307.776) (-1313.812) [-1307.116] (-1325.963) -- 0:04:57
Average standard deviation of split frequencies: 0.013974
506000 -- (-1328.126) (-1310.854) (-1316.082) [-1303.418] * (-1313.843) [-1307.668] (-1317.686) (-1319.729) -- 0:04:55
507000 -- (-1319.223) [-1301.021] (-1316.863) (-1311.447) * (-1315.978) [-1316.694] (-1317.832) (-1312.404) -- 0:04:55
508000 -- (-1333.506) [-1312.792] (-1317.555) (-1311.809) * (-1318.908) (-1315.213) (-1321.714) [-1303.120] -- 0:04:54
509000 -- [-1307.704] (-1308.531) (-1316.450) (-1328.449) * (-1317.328) (-1321.318) (-1309.695) [-1304.135] -- 0:04:54
510000 -- (-1310.798) [-1305.215] (-1313.280) (-1322.674) * [-1305.810] (-1324.147) (-1309.557) (-1312.216) -- 0:04:53
Average standard deviation of split frequencies: 0.014124
511000 -- (-1325.273) (-1305.732) [-1305.586] (-1328.899) * (-1310.760) (-1309.148) [-1306.785] (-1316.296) -- 0:04:52
512000 -- (-1323.185) (-1308.342) [-1302.916] (-1323.327) * (-1316.146) (-1324.426) (-1305.128) [-1300.534] -- 0:04:51
513000 -- (-1328.266) (-1314.891) [-1297.030] (-1304.372) * (-1311.782) (-1325.543) [-1303.806] (-1313.275) -- 0:04:51
514000 -- (-1310.860) (-1313.877) [-1304.454] (-1334.177) * (-1309.666) (-1314.126) (-1317.629) [-1312.405] -- 0:04:51
515000 -- [-1302.132] (-1319.126) (-1302.315) (-1326.675) * (-1312.520) (-1306.608) (-1310.973) [-1303.350] -- 0:04:50
Average standard deviation of split frequencies: 0.013886
516000 -- [-1300.812] (-1329.170) (-1295.095) (-1330.093) * (-1311.575) (-1308.094) (-1324.242) [-1297.643] -- 0:04:49
517000 -- (-1317.712) (-1333.077) [-1312.483] (-1319.619) * [-1310.461] (-1306.827) (-1320.047) (-1314.797) -- 0:04:48
518000 -- (-1309.798) (-1317.269) (-1305.186) [-1308.233] * [-1299.895] (-1313.968) (-1331.182) (-1305.711) -- 0:04:48
519000 -- (-1315.675) (-1308.724) [-1310.716] (-1311.159) * [-1308.876] (-1333.867) (-1311.542) (-1302.270) -- 0:04:47
520000 -- (-1330.894) (-1301.683) [-1317.994] (-1311.000) * (-1313.116) (-1324.394) (-1310.475) [-1301.699] -- 0:04:47
Average standard deviation of split frequencies: 0.013038
521000 -- (-1328.531) [-1307.078] (-1319.228) (-1306.235) * (-1323.583) (-1339.891) (-1308.187) [-1316.077] -- 0:04:46
522000 -- (-1320.736) (-1309.535) [-1307.151] (-1313.023) * [-1317.639] (-1305.293) (-1317.076) (-1324.602) -- 0:04:45
523000 -- (-1327.025) (-1311.135) [-1304.948] (-1311.463) * [-1318.296] (-1307.582) (-1320.130) (-1325.398) -- 0:04:45
524000 -- (-1338.648) (-1330.117) (-1312.225) [-1305.873] * [-1319.544] (-1314.613) (-1320.905) (-1329.672) -- 0:04:44
525000 -- (-1320.117) (-1314.678) [-1319.486] (-1300.885) * (-1325.302) (-1314.638) (-1321.260) [-1317.776] -- 0:04:44
Average standard deviation of split frequencies: 0.012726
526000 -- (-1321.514) (-1319.338) (-1312.964) [-1309.917] * (-1319.386) [-1308.401] (-1328.075) (-1315.393) -- 0:04:42
527000 -- (-1313.005) (-1328.418) [-1304.724] (-1317.850) * (-1312.403) [-1317.012] (-1328.275) (-1319.080) -- 0:04:42
528000 -- (-1319.639) [-1313.295] (-1310.345) (-1318.205) * (-1310.726) (-1310.828) [-1308.283] (-1321.243) -- 0:04:41
529000 -- (-1343.099) (-1320.633) [-1306.380] (-1312.582) * (-1313.376) (-1328.886) [-1303.245] (-1327.178) -- 0:04:41
530000 -- (-1330.851) (-1309.188) (-1317.995) [-1302.510] * (-1321.783) [-1311.809] (-1315.066) (-1327.306) -- 0:04:41
Average standard deviation of split frequencies: 0.012437
531000 -- (-1323.247) (-1309.118) [-1310.841] (-1327.135) * (-1322.703) [-1310.596] (-1315.187) (-1311.535) -- 0:04:39
532000 -- (-1320.092) [-1311.985] (-1312.414) (-1310.216) * (-1321.359) (-1321.088) [-1311.015] (-1307.076) -- 0:04:39
533000 -- (-1328.666) [-1316.043] (-1327.513) (-1313.760) * (-1321.299) [-1304.524] (-1310.799) (-1308.265) -- 0:04:38
534000 -- (-1323.319) [-1305.248] (-1325.489) (-1310.567) * [-1313.557] (-1311.585) (-1308.310) (-1307.249) -- 0:04:38
535000 -- [-1305.256] (-1310.287) (-1322.134) (-1308.795) * (-1323.716) (-1335.311) [-1317.361] (-1301.807) -- 0:04:37
Average standard deviation of split frequencies: 0.012489
536000 -- (-1306.761) (-1316.410) (-1339.687) [-1300.407] * (-1329.229) (-1319.180) (-1320.396) [-1300.949] -- 0:04:37
537000 -- [-1304.253] (-1320.955) (-1321.678) (-1321.111) * (-1333.555) (-1326.969) (-1311.643) [-1299.014] -- 0:04:36
538000 -- [-1312.236] (-1319.551) (-1329.094) (-1326.639) * (-1326.376) (-1314.354) (-1320.602) [-1315.197] -- 0:04:35
539000 -- (-1307.903) (-1331.975) [-1319.566] (-1325.857) * [-1312.330] (-1303.582) (-1320.283) (-1312.316) -- 0:04:35
540000 -- (-1305.850) (-1328.118) [-1312.433] (-1330.427) * (-1312.679) (-1312.727) (-1321.087) [-1304.927] -- 0:04:34
Average standard deviation of split frequencies: 0.013776
541000 -- [-1304.209] (-1323.154) (-1311.686) (-1333.971) * (-1317.762) (-1317.690) (-1310.788) [-1304.335] -- 0:04:34
542000 -- [-1304.353] (-1317.121) (-1321.565) (-1323.789) * (-1312.807) (-1325.098) (-1328.369) [-1304.293] -- 0:04:32
543000 -- [-1319.567] (-1308.693) (-1315.902) (-1338.573) * (-1318.910) (-1320.118) (-1319.038) [-1315.115] -- 0:04:32
544000 -- [-1314.415] (-1323.594) (-1316.894) (-1317.088) * (-1322.387) [-1306.725] (-1316.210) (-1308.775) -- 0:04:32
545000 -- [-1305.502] (-1321.300) (-1319.992) (-1314.515) * (-1318.621) (-1324.380) (-1317.856) [-1316.556] -- 0:04:31
Average standard deviation of split frequencies: 0.013037
546000 -- (-1322.311) (-1313.937) [-1304.014] (-1317.512) * (-1317.612) (-1311.873) [-1319.180] (-1321.723) -- 0:04:31
547000 -- (-1315.783) (-1321.931) [-1302.477] (-1309.114) * [-1310.308] (-1326.337) (-1307.887) (-1319.363) -- 0:04:29
548000 -- (-1322.150) (-1311.928) (-1304.725) [-1304.814] * (-1311.212) [-1321.072] (-1311.487) (-1318.124) -- 0:04:29
549000 -- (-1327.256) [-1309.389] (-1314.013) (-1322.051) * (-1311.131) (-1335.095) [-1310.562] (-1310.473) -- 0:04:28
550000 -- (-1317.013) [-1320.801] (-1301.635) (-1325.557) * (-1315.719) (-1303.232) [-1302.732] (-1327.992) -- 0:04:28
Average standard deviation of split frequencies: 0.012670
551000 -- (-1327.947) (-1320.427) [-1308.246] (-1313.657) * (-1313.552) (-1315.857) [-1304.806] (-1315.726) -- 0:04:27
552000 -- [-1308.445] (-1314.623) (-1310.350) (-1317.661) * (-1322.116) [-1316.435] (-1310.492) (-1312.922) -- 0:04:27
553000 -- (-1309.324) (-1327.207) [-1308.536] (-1312.956) * (-1317.522) [-1310.002] (-1302.947) (-1315.861) -- 0:04:26
554000 -- (-1307.092) (-1316.503) [-1309.243] (-1314.049) * (-1311.667) (-1321.477) [-1309.795] (-1318.236) -- 0:04:25
555000 -- [-1301.922] (-1311.583) (-1331.627) (-1322.126) * (-1312.227) (-1326.538) (-1310.238) [-1310.185] -- 0:04:25
Average standard deviation of split frequencies: 0.011616
556000 -- [-1309.296] (-1313.610) (-1318.454) (-1318.390) * [-1308.311] (-1312.775) (-1316.908) (-1307.130) -- 0:04:24
557000 -- (-1329.180) [-1311.061] (-1322.497) (-1308.615) * (-1314.847) (-1314.724) [-1309.998] (-1311.728) -- 0:04:24
558000 -- (-1315.898) [-1310.079] (-1310.522) (-1309.072) * (-1333.690) [-1299.064] (-1307.368) (-1320.867) -- 0:04:22
559000 -- (-1304.587) (-1321.023) [-1309.710] (-1319.640) * (-1325.988) [-1306.520] (-1321.017) (-1319.597) -- 0:04:22
560000 -- (-1310.031) [-1320.081] (-1319.658) (-1328.078) * [-1305.306] (-1317.652) (-1326.441) (-1326.569) -- 0:04:21
Average standard deviation of split frequencies: 0.011519
561000 -- (-1312.785) [-1314.283] (-1320.374) (-1308.270) * (-1312.039) (-1304.214) (-1314.052) [-1304.152] -- 0:04:21
562000 -- (-1312.207) [-1313.689] (-1317.096) (-1307.496) * (-1306.138) [-1307.115] (-1320.871) (-1319.525) -- 0:04:21
563000 -- (-1321.822) [-1303.838] (-1315.907) (-1312.938) * (-1324.970) [-1303.808] (-1311.427) (-1317.733) -- 0:04:20
564000 -- [-1308.746] (-1309.278) (-1323.875) (-1316.297) * [-1316.877] (-1311.881) (-1312.382) (-1323.380) -- 0:04:19
565000 -- [-1303.994] (-1325.976) (-1312.988) (-1318.216) * (-1321.317) [-1314.490] (-1314.109) (-1317.297) -- 0:04:18
Average standard deviation of split frequencies: 0.010911
566000 -- (-1314.677) [-1310.400] (-1319.990) (-1320.547) * [-1320.081] (-1309.779) (-1322.733) (-1325.936) -- 0:04:18
567000 -- (-1320.004) [-1306.788] (-1305.140) (-1315.774) * (-1327.758) (-1311.396) [-1309.143] (-1319.249) -- 0:04:17
568000 -- (-1314.344) (-1322.951) [-1310.324] (-1312.019) * (-1315.684) (-1310.531) (-1307.243) [-1307.101] -- 0:04:17
569000 -- (-1316.242) (-1323.887) [-1306.118] (-1322.988) * (-1309.593) (-1319.724) [-1306.936] (-1315.056) -- 0:04:16
570000 -- (-1322.013) (-1329.015) [-1304.498] (-1321.485) * (-1305.522) (-1328.531) (-1302.095) [-1298.842] -- 0:04:15
Average standard deviation of split frequencies: 0.010326
571000 -- (-1315.792) (-1329.633) [-1306.911] (-1321.900) * (-1329.045) (-1327.244) [-1308.748] (-1312.961) -- 0:04:15
572000 -- (-1309.833) (-1329.904) (-1317.730) [-1306.676] * (-1320.331) (-1324.610) (-1309.039) [-1299.972] -- 0:04:14
573000 -- (-1318.165) (-1327.531) (-1317.127) [-1317.452] * (-1318.798) (-1307.837) (-1311.480) [-1301.519] -- 0:04:14
574000 -- (-1308.905) (-1332.813) [-1310.266] (-1326.787) * (-1308.258) [-1305.793] (-1318.635) (-1305.414) -- 0:04:13
575000 -- (-1313.955) (-1329.071) [-1307.102] (-1316.921) * [-1305.538] (-1308.459) (-1318.685) (-1306.278) -- 0:04:12
Average standard deviation of split frequencies: 0.010312
576000 -- (-1301.418) (-1317.858) [-1316.064] (-1330.198) * (-1328.155) [-1301.525] (-1318.280) (-1306.848) -- 0:04:12
577000 -- (-1312.618) (-1315.987) (-1316.061) [-1306.516] * (-1318.512) [-1315.036] (-1313.196) (-1311.039) -- 0:04:11
578000 -- (-1312.555) (-1301.958) [-1309.676] (-1326.396) * (-1319.834) (-1302.971) [-1320.650] (-1313.122) -- 0:04:11
579000 -- [-1298.646] (-1314.345) (-1329.925) (-1316.032) * (-1308.308) (-1307.141) (-1321.193) [-1307.293] -- 0:04:10
580000 -- (-1310.345) (-1318.875) [-1304.461] (-1319.775) * [-1304.362] (-1312.696) (-1307.527) (-1302.995) -- 0:04:10
Average standard deviation of split frequencies: 0.010310
581000 -- (-1315.248) (-1310.604) (-1312.288) [-1310.078] * (-1308.984) (-1314.252) (-1313.492) [-1306.938] -- 0:04:10
582000 -- (-1330.375) (-1317.303) (-1311.325) [-1308.582] * (-1312.220) (-1316.220) (-1315.986) [-1303.210] -- 0:04:09
583000 -- [-1303.192] (-1322.691) (-1310.225) (-1304.668) * (-1312.763) (-1303.252) [-1312.622] (-1324.870) -- 0:04:08
584000 -- (-1310.823) (-1320.346) (-1314.316) [-1310.258] * (-1312.458) (-1311.752) (-1319.159) [-1304.250] -- 0:04:08
585000 -- (-1299.914) (-1320.624) [-1310.907] (-1317.292) * (-1318.205) (-1303.982) [-1306.751] (-1302.866) -- 0:04:08
Average standard deviation of split frequencies: 0.009573
586000 -- (-1310.515) (-1305.334) [-1304.877] (-1322.704) * (-1312.138) (-1310.984) [-1304.360] (-1317.139) -- 0:04:07
587000 -- (-1306.437) [-1307.352] (-1315.329) (-1306.089) * (-1309.983) (-1305.867) [-1303.521] (-1307.951) -- 0:04:07
588000 -- (-1306.746) [-1305.997] (-1308.599) (-1313.848) * (-1318.367) [-1320.252] (-1302.390) (-1315.461) -- 0:04:07
589000 -- (-1312.263) [-1300.635] (-1314.995) (-1308.669) * [-1304.900] (-1315.405) (-1301.424) (-1316.214) -- 0:04:07
590000 -- (-1316.807) [-1298.296] (-1310.024) (-1319.027) * (-1325.209) [-1312.072] (-1306.546) (-1325.706) -- 0:04:06
Average standard deviation of split frequencies: 0.009258
591000 -- (-1305.026) [-1307.481] (-1328.207) (-1307.952) * (-1303.355) (-1316.155) (-1315.159) [-1307.844] -- 0:04:05
592000 -- (-1314.543) [-1310.111] (-1320.772) (-1305.186) * (-1319.769) (-1326.013) [-1307.791] (-1316.349) -- 0:04:05
593000 -- (-1311.322) (-1308.072) (-1312.661) [-1319.041] * (-1317.615) (-1311.525) [-1311.336] (-1311.871) -- 0:04:05
594000 -- (-1317.885) (-1319.810) (-1320.803) [-1308.480] * [-1308.953] (-1334.174) (-1318.623) (-1315.718) -- 0:04:04
595000 -- [-1310.823] (-1324.267) (-1318.156) (-1309.197) * (-1309.721) (-1324.055) [-1309.034] (-1318.219) -- 0:04:04
Average standard deviation of split frequencies: 0.009650
596000 -- (-1329.351) (-1318.814) [-1310.885] (-1306.874) * (-1308.780) (-1320.530) [-1310.421] (-1310.848) -- 0:04:04
597000 -- (-1332.221) (-1305.748) (-1317.959) [-1304.250] * (-1303.831) [-1308.970] (-1313.640) (-1329.999) -- 0:04:03
598000 -- (-1319.607) (-1312.870) [-1311.952] (-1321.956) * (-1320.563) (-1307.906) [-1310.520] (-1316.313) -- 0:04:02
599000 -- (-1325.282) (-1315.677) (-1311.983) [-1307.723] * (-1326.614) (-1316.586) (-1305.079) [-1314.542] -- 0:04:02
600000 -- (-1335.228) [-1305.728] (-1311.183) (-1309.539) * (-1313.252) (-1309.888) [-1307.252] (-1316.639) -- 0:04:01
Average standard deviation of split frequencies: 0.009182
601000 -- (-1323.090) (-1318.047) (-1312.494) [-1303.165] * (-1320.389) (-1313.244) [-1304.223] (-1316.115) -- 0:04:01
602000 -- (-1321.682) (-1311.456) [-1311.913] (-1310.912) * (-1316.126) [-1309.145] (-1311.470) (-1311.768) -- 0:04:01
603000 -- (-1306.030) (-1327.278) (-1311.316) [-1306.575] * (-1323.834) (-1311.868) [-1310.968] (-1318.653) -- 0:04:00
604000 -- (-1314.078) (-1308.614) (-1319.794) [-1316.921] * (-1325.470) (-1330.979) (-1312.106) [-1319.724] -- 0:04:00
605000 -- (-1313.578) (-1339.199) (-1325.014) [-1321.595] * (-1308.802) (-1311.264) (-1304.417) [-1305.948] -- 0:03:59
Average standard deviation of split frequencies: 0.009490
606000 -- (-1330.345) (-1312.455) (-1316.274) [-1314.390] * (-1310.017) [-1311.682] (-1315.594) (-1314.420) -- 0:03:59
607000 -- (-1339.351) [-1308.377] (-1316.180) (-1316.725) * [-1300.236] (-1309.107) (-1327.892) (-1325.084) -- 0:03:58
608000 -- (-1322.896) (-1314.733) (-1316.559) [-1310.430] * (-1299.605) (-1315.889) [-1312.392] (-1307.844) -- 0:03:58
609000 -- (-1312.143) (-1314.034) (-1310.376) [-1306.230] * [-1303.552] (-1320.977) (-1307.755) (-1330.560) -- 0:03:58
610000 -- (-1318.809) [-1307.876] (-1312.371) (-1311.403) * (-1330.320) [-1306.029] (-1307.273) (-1327.297) -- 0:03:57
Average standard deviation of split frequencies: 0.008260
611000 -- (-1306.197) (-1310.096) [-1313.159] (-1317.085) * (-1324.374) (-1304.371) (-1300.123) [-1321.016] -- 0:03:57
612000 -- [-1304.573] (-1310.740) (-1309.482) (-1324.077) * (-1319.529) (-1319.602) (-1306.388) [-1316.418] -- 0:03:56
613000 -- (-1315.778) [-1317.049] (-1311.068) (-1304.182) * (-1320.070) (-1314.924) (-1319.358) [-1315.708] -- 0:03:56
614000 -- (-1304.681) (-1317.327) (-1327.803) [-1306.541] * (-1318.889) (-1319.168) [-1311.023] (-1306.810) -- 0:03:55
615000 -- (-1318.185) [-1305.767] (-1314.767) (-1310.068) * (-1328.298) [-1298.861] (-1336.099) (-1307.187) -- 0:03:55
Average standard deviation of split frequencies: 0.008724
616000 -- (-1305.996) (-1324.407) [-1314.158] (-1312.493) * (-1321.294) [-1312.979] (-1332.102) (-1304.385) -- 0:03:55
617000 -- [-1305.744] (-1326.316) (-1316.672) (-1305.764) * (-1325.942) [-1321.722] (-1324.438) (-1307.007) -- 0:03:54
618000 -- (-1312.253) [-1308.773] (-1314.157) (-1309.852) * [-1314.457] (-1321.434) (-1316.930) (-1316.228) -- 0:03:54
619000 -- [-1301.830] (-1315.232) (-1316.974) (-1315.028) * (-1310.708) [-1310.774] (-1325.875) (-1316.807) -- 0:03:53
620000 -- (-1319.490) (-1317.584) (-1307.714) [-1307.965] * (-1316.102) (-1329.226) (-1312.728) [-1308.494] -- 0:03:52
Average standard deviation of split frequencies: 0.008127
621000 -- [-1304.170] (-1312.377) (-1302.249) (-1318.964) * [-1308.588] (-1320.504) (-1308.278) (-1317.595) -- 0:03:52
622000 -- [-1303.539] (-1322.205) (-1316.145) (-1328.903) * (-1318.871) (-1320.145) [-1315.956] (-1307.004) -- 0:03:52
623000 -- (-1302.416) (-1317.546) [-1317.343] (-1312.077) * [-1311.227] (-1318.547) (-1318.245) (-1311.640) -- 0:03:51
624000 -- (-1318.664) (-1312.665) (-1323.149) [-1316.516] * (-1313.105) [-1312.792] (-1318.540) (-1316.120) -- 0:03:51
625000 -- (-1310.476) (-1320.502) (-1307.818) [-1304.938] * (-1319.582) (-1321.470) [-1306.666] (-1321.489) -- 0:03:51
Average standard deviation of split frequencies: 0.007305
626000 -- (-1309.379) (-1335.703) (-1313.084) [-1307.289] * [-1318.280] (-1330.924) (-1311.485) (-1317.395) -- 0:03:50
627000 -- (-1326.275) [-1311.659] (-1326.624) (-1306.689) * (-1313.656) (-1320.966) (-1318.918) [-1316.862] -- 0:03:49
628000 -- (-1310.938) [-1310.444] (-1327.679) (-1309.287) * (-1327.254) [-1303.625] (-1326.218) (-1318.775) -- 0:03:49
629000 -- (-1325.307) (-1315.944) (-1316.898) [-1305.929] * (-1305.330) [-1308.774] (-1330.587) (-1325.185) -- 0:03:48
630000 -- (-1329.089) (-1319.548) [-1308.147] (-1308.399) * [-1304.885] (-1312.049) (-1319.006) (-1316.263) -- 0:03:48
Average standard deviation of split frequencies: 0.007026
631000 -- (-1325.180) (-1315.533) (-1315.679) [-1311.557] * (-1309.239) (-1314.988) (-1308.048) [-1319.685] -- 0:03:48
632000 -- (-1320.741) (-1320.981) [-1313.844] (-1307.578) * [-1308.240] (-1329.985) (-1314.612) (-1308.328) -- 0:03:47
633000 -- (-1323.215) (-1312.366) [-1306.034] (-1304.397) * (-1306.703) (-1322.679) (-1319.148) [-1311.434] -- 0:03:46
634000 -- (-1316.076) (-1315.416) [-1303.167] (-1314.466) * [-1306.780] (-1319.764) (-1314.286) (-1308.612) -- 0:03:46
635000 -- (-1306.618) (-1330.302) [-1301.539] (-1315.944) * [-1312.348] (-1325.203) (-1316.596) (-1313.476) -- 0:03:45
Average standard deviation of split frequencies: 0.007116
636000 -- (-1309.702) (-1322.735) [-1308.130] (-1316.087) * (-1305.237) [-1312.295] (-1311.127) (-1306.115) -- 0:03:45
637000 -- (-1304.240) (-1325.995) [-1303.968] (-1315.341) * [-1312.184] (-1313.190) (-1314.597) (-1318.409) -- 0:03:45
638000 -- (-1313.757) (-1313.773) [-1301.018] (-1316.141) * (-1325.806) (-1308.581) (-1314.856) [-1314.276] -- 0:03:44
639000 -- (-1308.904) (-1320.481) (-1315.028) [-1307.037] * (-1317.430) (-1302.933) (-1321.410) [-1320.663] -- 0:03:43
640000 -- (-1306.203) (-1317.118) (-1333.472) [-1298.523] * (-1310.150) (-1315.489) (-1339.185) [-1303.045] -- 0:03:43
Average standard deviation of split frequencies: 0.006622
641000 -- [-1304.893] (-1319.056) (-1307.683) (-1314.492) * (-1313.730) [-1317.157] (-1331.092) (-1314.871) -- 0:03:42
642000 -- (-1310.182) (-1331.886) [-1318.707] (-1318.204) * [-1323.318] (-1307.779) (-1313.870) (-1322.964) -- 0:03:41
643000 -- [-1324.165] (-1322.357) (-1318.821) (-1320.062) * (-1314.556) (-1319.761) [-1308.023] (-1316.407) -- 0:03:41
644000 -- (-1329.533) (-1313.764) (-1315.523) [-1309.654] * (-1322.375) (-1335.461) [-1306.637] (-1307.099) -- 0:03:40
645000 -- (-1314.102) (-1334.753) (-1317.055) [-1318.164] * [-1314.058] (-1313.083) (-1322.903) (-1315.458) -- 0:03:40
Average standard deviation of split frequencies: 0.006130
646000 -- [-1321.688] (-1330.555) (-1308.487) (-1314.175) * (-1314.740) [-1307.008] (-1317.634) (-1309.481) -- 0:03:39
647000 -- (-1319.828) (-1314.675) [-1315.465] (-1315.399) * [-1310.222] (-1313.982) (-1318.990) (-1318.578) -- 0:03:38
648000 -- (-1322.532) (-1310.595) (-1327.625) [-1308.622] * (-1317.969) (-1308.300) (-1319.555) [-1306.495] -- 0:03:38
649000 -- (-1306.950) (-1311.155) (-1338.089) [-1304.054] * (-1318.978) (-1313.970) [-1296.777] (-1316.003) -- 0:03:37
650000 -- (-1315.196) (-1303.804) (-1337.392) [-1316.391] * (-1335.851) (-1312.451) (-1316.492) [-1305.346] -- 0:03:37
Average standard deviation of split frequencies: 0.006158
651000 -- [-1311.918] (-1306.894) (-1329.898) (-1322.930) * (-1330.693) [-1303.868] (-1333.346) (-1318.085) -- 0:03:36
652000 -- [-1308.013] (-1320.630) (-1310.409) (-1316.086) * (-1313.074) [-1311.887] (-1311.076) (-1323.765) -- 0:03:35
653000 -- [-1302.423] (-1319.163) (-1321.184) (-1321.557) * (-1316.262) [-1310.124] (-1321.873) (-1307.803) -- 0:03:34
654000 -- [-1313.502] (-1313.492) (-1305.379) (-1322.816) * (-1302.922) (-1321.060) [-1306.712] (-1306.503) -- 0:03:34
655000 -- (-1320.928) (-1317.516) [-1313.289] (-1325.347) * (-1308.836) (-1320.975) (-1315.317) [-1309.519] -- 0:03:33
Average standard deviation of split frequencies: 0.005461
656000 -- [-1320.836] (-1316.821) (-1306.510) (-1327.663) * (-1314.621) (-1326.312) (-1309.348) [-1313.989] -- 0:03:32
657000 -- [-1309.391] (-1328.871) (-1305.742) (-1325.037) * (-1313.817) [-1303.979] (-1319.575) (-1312.577) -- 0:03:32
658000 -- [-1305.733] (-1317.168) (-1315.641) (-1318.711) * [-1308.424] (-1323.005) (-1320.775) (-1317.517) -- 0:03:31
659000 -- [-1304.983] (-1311.015) (-1310.227) (-1316.859) * (-1316.835) [-1302.076] (-1309.014) (-1318.010) -- 0:03:31
660000 -- [-1306.676] (-1322.580) (-1311.248) (-1307.151) * [-1309.840] (-1313.829) (-1326.917) (-1313.420) -- 0:03:30
Average standard deviation of split frequencies: 0.005209
661000 -- (-1302.918) (-1318.901) [-1307.601] (-1302.481) * [-1312.006] (-1316.101) (-1310.581) (-1335.258) -- 0:03:29
662000 -- (-1314.169) (-1319.605) (-1316.333) [-1302.063] * (-1312.618) (-1308.734) [-1303.198] (-1322.796) -- 0:03:28
663000 -- (-1319.055) (-1322.608) (-1320.830) [-1312.554] * (-1313.217) [-1312.165] (-1318.000) (-1330.705) -- 0:03:28
664000 -- [-1313.212] (-1312.247) (-1317.212) (-1323.054) * (-1320.297) [-1313.254] (-1314.553) (-1313.049) -- 0:03:27
665000 -- (-1323.752) (-1316.420) [-1314.813] (-1322.414) * [-1306.936] (-1304.180) (-1301.216) (-1313.262) -- 0:03:27
Average standard deviation of split frequencies: 0.004884
666000 -- (-1314.487) (-1311.724) (-1314.231) [-1315.416] * (-1322.171) (-1315.692) [-1310.378] (-1313.747) -- 0:03:26
667000 -- (-1313.132) (-1308.941) [-1318.634] (-1304.381) * (-1325.437) (-1308.835) [-1306.867] (-1318.235) -- 0:03:25
668000 -- (-1312.524) (-1311.922) (-1349.713) [-1305.287] * (-1308.497) [-1306.944] (-1318.292) (-1324.898) -- 0:03:25
669000 -- (-1314.704) (-1304.488) [-1317.123] (-1306.496) * (-1324.776) [-1307.488] (-1305.021) (-1320.688) -- 0:03:24
670000 -- (-1322.548) (-1316.736) [-1309.072] (-1314.589) * (-1310.918) (-1311.026) (-1316.788) [-1317.272] -- 0:03:24
Average standard deviation of split frequencies: 0.004639
671000 -- (-1321.502) (-1314.537) [-1315.543] (-1313.412) * (-1309.767) [-1314.825] (-1323.744) (-1314.155) -- 0:03:23
672000 -- [-1314.357] (-1317.798) (-1307.287) (-1314.968) * [-1306.910] (-1323.252) (-1329.276) (-1312.954) -- 0:03:23
673000 -- (-1315.698) (-1313.718) [-1305.682] (-1333.085) * (-1321.057) [-1313.495] (-1317.891) (-1312.312) -- 0:03:22
674000 -- (-1320.942) (-1303.384) [-1310.085] (-1326.385) * [-1313.637] (-1323.714) (-1308.928) (-1338.641) -- 0:03:22
675000 -- (-1320.128) (-1310.889) (-1311.653) [-1318.423] * (-1320.702) (-1326.693) [-1303.689] (-1309.414) -- 0:03:21
Average standard deviation of split frequencies: 0.005300
676000 -- (-1325.112) (-1323.645) (-1334.621) [-1316.263] * (-1316.729) (-1313.362) (-1310.307) [-1300.872] -- 0:03:20
677000 -- (-1325.869) (-1317.546) [-1311.838] (-1323.988) * (-1314.300) (-1322.015) (-1309.754) [-1302.175] -- 0:03:19
678000 -- (-1333.551) (-1323.561) (-1309.222) [-1308.805] * (-1307.810) (-1324.530) [-1307.619] (-1314.969) -- 0:03:19
679000 -- (-1335.003) (-1307.720) [-1310.978] (-1315.897) * (-1302.880) (-1319.918) (-1309.198) [-1313.139] -- 0:03:19
680000 -- (-1324.030) (-1312.736) [-1310.062] (-1318.146) * [-1314.198] (-1326.161) (-1319.322) (-1316.458) -- 0:03:18
Average standard deviation of split frequencies: 0.004779
681000 -- [-1322.245] (-1318.213) (-1311.932) (-1316.592) * (-1309.451) [-1309.046] (-1307.438) (-1309.660) -- 0:03:17
682000 -- [-1304.551] (-1309.179) (-1313.225) (-1326.898) * (-1316.661) [-1306.628] (-1314.784) (-1321.002) -- 0:03:17
683000 -- (-1318.810) [-1309.261] (-1320.799) (-1317.110) * (-1314.648) (-1310.861) (-1304.842) [-1305.860] -- 0:03:16
684000 -- (-1314.636) [-1323.278] (-1320.156) (-1314.713) * (-1309.468) (-1309.685) [-1307.535] (-1319.149) -- 0:03:16
685000 -- (-1306.422) (-1304.623) (-1318.386) [-1321.653] * (-1317.430) [-1308.757] (-1310.964) (-1318.692) -- 0:03:15
Average standard deviation of split frequencies: 0.004467
686000 -- (-1317.212) (-1312.899) [-1311.326] (-1307.135) * (-1310.996) (-1318.563) [-1312.195] (-1325.146) -- 0:03:15
687000 -- (-1315.242) (-1314.370) (-1319.887) [-1312.462] * [-1316.222] (-1316.326) (-1323.359) (-1327.298) -- 0:03:14
688000 -- (-1314.239) [-1304.654] (-1328.407) (-1314.000) * (-1299.664) (-1318.437) [-1308.780] (-1332.372) -- 0:03:14
689000 -- (-1306.661) [-1311.644] (-1322.082) (-1309.516) * (-1309.620) (-1313.689) [-1302.392] (-1333.274) -- 0:03:13
690000 -- (-1318.723) [-1314.663] (-1321.519) (-1304.902) * (-1310.767) (-1317.145) [-1317.602] (-1314.927) -- 0:03:13
Average standard deviation of split frequencies: 0.003754
691000 -- (-1312.882) (-1306.967) (-1323.237) [-1307.639] * (-1310.689) [-1311.173] (-1306.799) (-1325.972) -- 0:03:12
692000 -- (-1315.549) [-1294.194] (-1321.140) (-1316.437) * (-1315.069) (-1312.183) [-1305.925] (-1309.603) -- 0:03:12
693000 -- (-1306.152) [-1311.127] (-1331.480) (-1310.353) * (-1322.798) [-1304.047] (-1313.347) (-1314.462) -- 0:03:11
694000 -- (-1316.302) (-1312.784) (-1323.648) [-1304.066] * (-1327.206) [-1311.224] (-1313.762) (-1306.540) -- 0:03:11
695000 -- (-1322.376) (-1328.926) (-1316.544) [-1305.769] * (-1309.620) [-1315.247] (-1307.461) (-1312.185) -- 0:03:10
Average standard deviation of split frequencies: 0.003928
696000 -- (-1316.703) (-1317.418) [-1302.721] (-1302.078) * (-1322.134) (-1319.809) [-1304.316] (-1308.631) -- 0:03:10
697000 -- (-1315.896) [-1305.698] (-1312.638) (-1307.570) * (-1315.632) (-1308.535) (-1314.536) [-1303.356] -- 0:03:09
698000 -- (-1319.183) (-1311.543) [-1308.660] (-1310.117) * [-1312.748] (-1319.862) (-1322.359) (-1315.365) -- 0:03:09
699000 -- (-1310.653) [-1306.441] (-1305.938) (-1310.451) * (-1306.381) (-1306.953) [-1312.914] (-1329.258) -- 0:03:08
700000 -- (-1317.508) (-1309.900) (-1302.695) [-1308.175] * (-1311.704) [-1308.249] (-1313.817) (-1326.821) -- 0:03:08
Average standard deviation of split frequencies: 0.003700
701000 -- (-1321.235) (-1315.889) (-1313.637) [-1313.406] * (-1315.536) (-1313.990) [-1311.891] (-1303.827) -- 0:03:07
702000 -- (-1328.755) (-1312.723) [-1311.987] (-1314.190) * (-1314.951) [-1309.606] (-1296.804) (-1308.935) -- 0:03:07
703000 -- (-1312.459) (-1303.591) (-1313.868) [-1304.480] * (-1323.060) [-1312.275] (-1323.588) (-1306.139) -- 0:03:06
704000 -- (-1323.165) [-1311.881] (-1310.070) (-1317.001) * [-1304.582] (-1312.102) (-1325.572) (-1316.053) -- 0:03:05
705000 -- (-1321.506) (-1305.861) (-1303.637) [-1315.013] * (-1306.231) (-1321.414) [-1314.857] (-1319.426) -- 0:03:05
Average standard deviation of split frequencies: 0.003939
706000 -- (-1307.317) (-1307.094) [-1311.445] (-1318.334) * (-1312.296) [-1306.354] (-1314.091) (-1301.939) -- 0:03:04
707000 -- [-1297.695] (-1315.823) (-1309.982) (-1330.081) * (-1320.209) (-1305.759) (-1311.983) [-1305.736] -- 0:03:04
708000 -- [-1300.740] (-1322.029) (-1332.835) (-1327.628) * [-1311.578] (-1311.165) (-1325.033) (-1308.787) -- 0:03:03
709000 -- [-1310.593] (-1309.104) (-1310.891) (-1323.865) * (-1310.849) (-1312.868) (-1319.727) [-1304.693] -- 0:03:03
710000 -- (-1310.660) (-1315.150) [-1316.081] (-1329.528) * [-1318.317] (-1314.715) (-1328.941) (-1312.901) -- 0:03:02
Average standard deviation of split frequencies: 0.004643
711000 -- [-1310.296] (-1319.644) (-1319.848) (-1332.186) * (-1306.502) (-1322.353) (-1327.306) [-1316.319] -- 0:03:02
712000 -- (-1308.307) [-1311.123] (-1313.606) (-1322.385) * [-1301.239] (-1324.310) (-1326.015) (-1307.490) -- 0:03:02
713000 -- (-1322.701) (-1312.253) [-1300.101] (-1318.741) * (-1313.487) (-1312.577) [-1307.250] (-1326.269) -- 0:03:01
714000 -- (-1338.094) (-1309.640) (-1311.329) [-1320.500] * (-1313.167) [-1304.961] (-1312.307) (-1315.851) -- 0:03:00
715000 -- (-1331.989) [-1310.272] (-1315.032) (-1321.411) * (-1311.415) (-1317.250) [-1301.931] (-1328.727) -- 0:03:00
Average standard deviation of split frequencies: 0.005333
716000 -- (-1328.586) (-1299.905) [-1305.076] (-1315.554) * (-1326.091) (-1307.975) (-1312.791) [-1308.740] -- 0:02:59
717000 -- (-1318.024) (-1305.726) [-1307.220] (-1313.920) * (-1315.702) (-1320.428) [-1307.218] (-1313.918) -- 0:02:59
718000 -- (-1308.071) [-1308.297] (-1323.911) (-1311.315) * (-1321.110) (-1311.101) (-1313.205) [-1308.291] -- 0:02:58
719000 -- (-1327.181) (-1316.013) (-1317.461) [-1302.915] * (-1316.094) (-1305.340) [-1311.551] (-1319.171) -- 0:02:58
720000 -- (-1309.551) (-1316.975) (-1316.110) [-1300.226] * [-1309.039] (-1310.814) (-1318.988) (-1306.753) -- 0:02:57
Average standard deviation of split frequencies: 0.005037
721000 -- (-1310.630) (-1315.444) (-1315.874) [-1301.003] * (-1305.758) (-1319.319) (-1312.146) [-1299.041] -- 0:02:57
722000 -- (-1316.715) (-1323.444) [-1313.457] (-1306.759) * [-1311.332] (-1312.545) (-1319.652) (-1305.859) -- 0:02:56
723000 -- [-1300.699] (-1315.126) (-1315.084) (-1312.207) * (-1324.535) (-1322.322) (-1319.288) [-1300.568] -- 0:02:55
724000 -- [-1300.123] (-1319.871) (-1326.032) (-1326.416) * (-1310.333) [-1311.947] (-1329.907) (-1308.003) -- 0:02:55
725000 -- (-1298.858) (-1309.567) (-1320.372) [-1306.033] * (-1311.305) (-1325.855) (-1307.487) [-1298.750] -- 0:02:54
Average standard deviation of split frequencies: 0.004740
726000 -- [-1301.176] (-1304.017) (-1315.839) (-1313.518) * [-1310.299] (-1323.935) (-1307.375) (-1312.190) -- 0:02:54
727000 -- [-1309.028] (-1309.176) (-1323.254) (-1312.040) * (-1307.613) (-1306.690) (-1328.496) [-1314.421] -- 0:02:53
728000 -- (-1310.369) [-1310.247] (-1323.273) (-1310.714) * [-1309.148] (-1323.667) (-1309.396) (-1313.609) -- 0:02:53
729000 -- (-1319.392) (-1331.419) (-1318.174) [-1307.267] * (-1317.924) (-1320.464) [-1307.174] (-1313.742) -- 0:02:52
730000 -- (-1307.234) [-1314.765] (-1332.198) (-1307.153) * (-1320.759) (-1307.256) [-1308.251] (-1315.098) -- 0:02:51
Average standard deviation of split frequencies: 0.005226
731000 -- (-1316.097) [-1304.209] (-1326.060) (-1309.992) * (-1320.536) [-1306.761] (-1308.746) (-1322.102) -- 0:02:51
732000 -- (-1315.384) (-1314.736) (-1323.955) [-1304.300] * (-1345.242) (-1315.130) [-1303.868] (-1315.059) -- 0:02:50
733000 -- (-1322.825) [-1307.995] (-1317.921) (-1332.926) * (-1317.715) (-1326.128) [-1306.520] (-1318.784) -- 0:02:50
734000 -- (-1306.965) (-1313.206) [-1307.261] (-1324.900) * (-1316.364) (-1306.163) [-1306.912] (-1324.820) -- 0:02:49
735000 -- (-1319.747) (-1312.082) [-1306.947] (-1326.401) * [-1304.788] (-1316.537) (-1316.966) (-1315.615) -- 0:02:49
Average standard deviation of split frequencies: 0.005508
736000 -- (-1333.369) (-1313.259) [-1303.193] (-1328.691) * [-1301.891] (-1316.129) (-1306.269) (-1322.540) -- 0:02:48
737000 -- (-1327.338) [-1304.980] (-1307.699) (-1326.134) * [-1301.006] (-1318.080) (-1306.427) (-1319.309) -- 0:02:48
738000 -- (-1312.501) (-1322.992) (-1307.303) [-1308.720] * [-1304.592] (-1314.123) (-1311.849) (-1316.805) -- 0:02:47
739000 -- (-1312.848) (-1319.426) (-1315.978) [-1308.266] * (-1310.332) [-1306.770] (-1306.575) (-1318.385) -- 0:02:47
740000 -- (-1314.200) (-1307.329) (-1329.227) [-1304.821] * (-1311.183) [-1303.543] (-1314.736) (-1326.340) -- 0:02:46
Average standard deviation of split frequencies: 0.005728
741000 -- (-1307.067) (-1320.313) (-1322.368) [-1313.706] * (-1314.696) [-1305.232] (-1325.680) (-1318.328) -- 0:02:46
742000 -- (-1328.027) (-1315.524) (-1311.249) [-1306.823] * (-1308.501) [-1304.623] (-1318.605) (-1311.627) -- 0:02:45
743000 -- (-1331.740) (-1321.460) [-1305.077] (-1308.982) * (-1326.245) (-1305.063) (-1316.555) [-1304.468] -- 0:02:44
744000 -- (-1325.063) (-1326.976) (-1312.292) [-1308.882] * (-1308.689) [-1304.192] (-1318.110) (-1302.740) -- 0:02:44
745000 -- (-1314.230) (-1300.215) [-1311.960] (-1319.017) * (-1317.287) [-1317.493] (-1316.818) (-1309.445) -- 0:02:43
Average standard deviation of split frequencies: 0.005434
746000 -- [-1314.407] (-1329.294) (-1316.686) (-1311.585) * (-1316.551) [-1302.166] (-1321.734) (-1308.491) -- 0:02:43
747000 -- (-1319.569) (-1326.845) (-1319.940) [-1312.447] * (-1310.805) [-1299.288] (-1331.584) (-1317.264) -- 0:02:42
748000 -- (-1326.926) (-1324.663) (-1329.835) [-1314.276] * (-1311.440) [-1306.516] (-1318.563) (-1317.712) -- 0:02:42
749000 -- (-1324.786) (-1326.548) (-1331.646) [-1318.441] * (-1316.945) (-1306.878) (-1311.127) [-1315.137] -- 0:02:41
750000 -- [-1310.225] (-1321.626) (-1313.002) (-1312.778) * [-1302.313] (-1336.058) (-1309.840) (-1311.943) -- 0:02:41
Average standard deviation of split frequencies: 0.005212
751000 -- (-1307.700) [-1309.195] (-1306.694) (-1299.951) * (-1313.264) (-1326.144) [-1307.102] (-1319.579) -- 0:02:40
752000 -- (-1311.643) (-1311.575) (-1314.740) [-1308.529] * (-1316.105) (-1331.960) (-1315.201) [-1307.468] -- 0:02:39
753000 -- (-1319.365) (-1317.598) [-1301.290] (-1321.177) * (-1320.993) (-1313.763) [-1321.029] (-1319.130) -- 0:02:39
754000 -- (-1309.514) [-1303.222] (-1325.136) (-1308.731) * (-1320.724) (-1316.066) (-1314.080) [-1303.936] -- 0:02:38
755000 -- [-1311.978] (-1315.418) (-1340.680) (-1329.668) * [-1317.987] (-1309.929) (-1323.747) (-1303.332) -- 0:02:38
Average standard deviation of split frequencies: 0.004677
756000 -- [-1304.154] (-1314.973) (-1321.942) (-1316.484) * (-1329.229) (-1311.858) (-1329.284) [-1305.955] -- 0:02:37
757000 -- [-1304.210] (-1317.922) (-1330.494) (-1311.030) * (-1325.473) [-1302.477] (-1315.621) (-1318.103) -- 0:02:36
758000 -- (-1321.017) [-1308.250] (-1313.390) (-1306.596) * (-1331.295) [-1307.519] (-1310.827) (-1309.861) -- 0:02:36
759000 -- (-1323.777) (-1312.501) [-1308.278] (-1319.616) * (-1321.665) (-1307.014) (-1308.275) [-1308.227] -- 0:02:35
760000 -- (-1319.569) [-1313.596] (-1304.146) (-1312.561) * (-1321.904) (-1308.957) [-1302.211] (-1314.782) -- 0:02:35
Average standard deviation of split frequencies: 0.004090
761000 -- (-1315.068) (-1319.864) [-1310.142] (-1311.997) * [-1309.623] (-1315.729) (-1310.234) (-1316.821) -- 0:02:34
762000 -- (-1311.347) (-1325.468) [-1308.065] (-1330.909) * [-1309.355] (-1325.181) (-1314.333) (-1309.483) -- 0:02:33
763000 -- [-1300.409] (-1312.187) (-1310.836) (-1324.741) * [-1312.995] (-1326.172) (-1314.301) (-1303.545) -- 0:02:33
764000 -- (-1313.824) [-1310.456] (-1328.803) (-1316.538) * [-1314.231] (-1328.976) (-1318.294) (-1328.875) -- 0:02:32
765000 -- (-1325.242) [-1308.763] (-1341.587) (-1316.324) * (-1301.705) (-1327.542) [-1304.526] (-1324.318) -- 0:02:32
Average standard deviation of split frequencies: 0.003754
766000 -- (-1325.990) [-1310.258] (-1310.122) (-1323.768) * (-1315.111) [-1315.458] (-1313.626) (-1323.230) -- 0:02:31
767000 -- (-1316.722) (-1317.825) (-1307.956) [-1307.695] * (-1323.543) [-1316.431] (-1322.739) (-1339.334) -- 0:02:31
768000 -- (-1319.508) [-1312.014] (-1299.579) (-1320.878) * (-1328.899) [-1317.942] (-1310.012) (-1328.814) -- 0:02:30
769000 -- (-1325.306) (-1310.756) [-1311.159] (-1316.483) * [-1324.040] (-1324.288) (-1306.424) (-1324.538) -- 0:02:30
770000 -- (-1323.970) [-1302.651] (-1322.176) (-1321.042) * (-1324.671) (-1325.019) [-1302.569] (-1329.653) -- 0:02:29
Average standard deviation of split frequencies: 0.003854
771000 -- (-1315.595) (-1301.993) [-1307.693] (-1314.374) * (-1321.106) [-1309.587] (-1303.135) (-1315.399) -- 0:02:28
772000 -- [-1303.886] (-1315.559) (-1316.704) (-1318.833) * (-1316.628) [-1310.221] (-1309.730) (-1328.846) -- 0:02:28
773000 -- (-1318.287) (-1335.193) (-1312.804) [-1302.113] * [-1314.747] (-1327.278) (-1307.889) (-1314.762) -- 0:02:27
774000 -- (-1319.073) (-1317.514) [-1304.260] (-1306.629) * [-1312.940] (-1311.375) (-1322.945) (-1322.960) -- 0:02:27
775000 -- (-1316.497) [-1317.101] (-1316.673) (-1331.320) * (-1313.340) [-1311.163] (-1319.335) (-1324.727) -- 0:02:26
Average standard deviation of split frequencies: 0.003827
776000 -- (-1338.634) [-1305.170] (-1308.280) (-1320.498) * (-1324.350) (-1309.214) [-1309.685] (-1323.727) -- 0:02:26
777000 -- (-1324.925) (-1323.762) (-1309.444) [-1306.196] * (-1323.549) [-1327.714] (-1309.066) (-1316.881) -- 0:02:25
778000 -- (-1315.019) (-1320.843) (-1307.686) [-1316.584] * (-1307.392) (-1330.797) (-1303.295) [-1312.684] -- 0:02:24
779000 -- [-1312.445] (-1328.344) (-1319.705) (-1321.810) * [-1303.233] (-1318.792) (-1315.226) (-1321.764) -- 0:02:24
780000 -- (-1313.142) (-1328.051) (-1312.626) [-1313.354] * [-1308.766] (-1314.874) (-1312.251) (-1312.645) -- 0:02:23
Average standard deviation of split frequencies: 0.004167
781000 -- (-1313.566) (-1326.580) (-1320.896) [-1310.600] * [-1306.860] (-1308.821) (-1318.698) (-1315.338) -- 0:02:23
782000 -- (-1316.112) (-1316.158) (-1318.992) [-1312.802] * (-1319.815) [-1306.241] (-1319.449) (-1312.239) -- 0:02:22
783000 -- (-1323.253) (-1332.395) (-1322.947) [-1306.144] * (-1316.760) (-1312.382) (-1307.635) [-1305.695] -- 0:02:21
784000 -- [-1305.883] (-1319.706) (-1321.788) (-1306.835) * (-1316.814) [-1305.953] (-1315.411) (-1320.086) -- 0:02:21
785000 -- (-1321.330) (-1312.340) (-1322.994) [-1311.011] * (-1308.997) [-1301.833] (-1340.046) (-1324.420) -- 0:02:20
Average standard deviation of split frequencies: 0.004678
786000 -- [-1313.736] (-1323.966) (-1319.016) (-1305.952) * (-1310.232) [-1301.536] (-1327.754) (-1314.011) -- 0:02:20
787000 -- (-1308.186) (-1317.810) (-1327.561) [-1302.308] * (-1310.340) (-1313.887) (-1314.888) [-1306.653] -- 0:02:19
788000 -- [-1310.027] (-1306.517) (-1308.947) (-1314.991) * (-1313.772) (-1314.695) [-1305.726] (-1312.848) -- 0:02:19
789000 -- (-1334.519) [-1322.484] (-1320.035) (-1310.084) * (-1323.415) (-1324.177) (-1302.391) [-1308.034] -- 0:02:18
790000 -- [-1320.170] (-1312.820) (-1318.482) (-1306.548) * (-1319.918) [-1312.046] (-1312.913) (-1305.395) -- 0:02:17
Average standard deviation of split frequencies: 0.005068
791000 -- (-1315.850) (-1318.913) [-1312.134] (-1303.403) * (-1319.709) (-1309.766) (-1310.306) [-1304.359] -- 0:02:17
792000 -- (-1310.579) (-1327.996) (-1313.289) [-1301.207] * (-1307.889) (-1320.076) (-1309.879) [-1302.466] -- 0:02:16
793000 -- [-1305.887] (-1318.148) (-1315.754) (-1305.605) * (-1319.542) [-1315.168] (-1308.033) (-1314.671) -- 0:02:15
794000 -- (-1315.004) (-1318.127) (-1325.655) [-1313.427] * (-1320.070) [-1322.557] (-1306.497) (-1321.646) -- 0:02:15
795000 -- [-1311.946] (-1302.900) (-1331.025) (-1320.307) * (-1333.741) [-1316.623] (-1306.971) (-1305.976) -- 0:02:14
Average standard deviation of split frequencies: 0.005508
796000 -- [-1308.124] (-1300.699) (-1324.544) (-1314.188) * (-1318.297) (-1314.831) (-1329.273) [-1303.583] -- 0:02:14
797000 -- (-1302.891) [-1306.041] (-1321.546) (-1317.570) * (-1304.617) [-1304.323] (-1318.283) (-1307.494) -- 0:02:13
798000 -- (-1303.786) (-1312.356) (-1321.586) [-1310.096] * (-1297.350) (-1329.455) (-1322.359) [-1312.942] -- 0:02:12
799000 -- [-1304.720] (-1321.014) (-1329.874) (-1313.477) * [-1312.199] (-1319.139) (-1319.000) (-1312.604) -- 0:02:12
800000 -- (-1306.353) (-1312.276) (-1327.586) [-1305.058] * (-1317.165) (-1324.486) [-1313.041] (-1319.267) -- 0:02:11
Average standard deviation of split frequencies: 0.005888
801000 -- (-1305.316) (-1329.547) [-1312.542] (-1310.474) * (-1326.543) (-1311.544) [-1303.873] (-1317.295) -- 0:02:11
802000 -- (-1320.661) (-1317.831) [-1310.327] (-1310.522) * (-1314.430) [-1317.432] (-1314.063) (-1313.116) -- 0:02:10
803000 -- (-1319.705) (-1303.895) [-1310.674] (-1312.893) * (-1310.120) (-1309.789) (-1323.264) [-1309.637] -- 0:02:10
804000 -- (-1305.429) (-1327.777) (-1313.290) [-1310.420] * (-1312.548) (-1320.018) (-1322.153) [-1317.661] -- 0:02:09
805000 -- [-1306.091] (-1326.921) (-1307.409) (-1308.833) * [-1298.554] (-1309.464) (-1317.909) (-1315.105) -- 0:02:08
Average standard deviation of split frequencies: 0.006024
806000 -- (-1318.058) (-1313.514) [-1312.697] (-1311.560) * [-1307.182] (-1306.966) (-1305.896) (-1309.608) -- 0:02:08
807000 -- [-1316.151] (-1331.699) (-1312.446) (-1304.528) * (-1312.858) (-1316.537) [-1306.752] (-1315.852) -- 0:02:07
808000 -- (-1321.233) (-1329.578) [-1310.478] (-1319.563) * (-1318.207) (-1307.548) [-1303.909] (-1324.595) -- 0:02:06
809000 -- [-1305.565] (-1325.119) (-1330.067) (-1321.014) * (-1313.495) (-1313.477) [-1299.247] (-1320.710) -- 0:02:06
810000 -- (-1312.721) (-1330.381) (-1326.351) [-1314.957] * (-1311.038) (-1315.113) [-1297.772] (-1313.150) -- 0:02:05
Average standard deviation of split frequencies: 0.006048
811000 -- [-1313.368] (-1332.377) (-1321.592) (-1306.679) * (-1310.081) [-1310.814] (-1308.039) (-1312.150) -- 0:02:05
812000 -- (-1317.676) (-1314.497) [-1302.467] (-1333.466) * [-1308.836] (-1327.613) (-1311.161) (-1306.114) -- 0:02:04
813000 -- (-1314.749) (-1303.992) [-1317.168] (-1325.580) * (-1311.011) (-1328.911) (-1307.879) [-1310.510] -- 0:02:03
814000 -- (-1311.911) (-1320.215) [-1302.484] (-1313.223) * (-1308.624) (-1303.769) (-1309.444) [-1305.725] -- 0:02:03
815000 -- (-1329.955) (-1314.955) [-1306.778] (-1308.598) * (-1326.563) [-1309.023] (-1304.810) (-1316.232) -- 0:02:02
Average standard deviation of split frequencies: 0.005950
816000 -- (-1315.814) [-1320.556] (-1315.490) (-1315.806) * (-1329.336) (-1318.702) (-1315.038) [-1319.144] -- 0:02:01
817000 -- (-1311.284) (-1312.668) (-1314.231) [-1305.816] * (-1309.683) [-1310.348] (-1305.928) (-1319.789) -- 0:02:01
818000 -- (-1316.718) (-1327.223) (-1322.665) [-1306.825] * (-1304.791) (-1306.505) [-1309.409] (-1324.039) -- 0:02:00
819000 -- (-1306.801) [-1318.275] (-1313.032) (-1313.623) * (-1324.204) [-1307.594] (-1311.537) (-1314.558) -- 0:02:00
820000 -- (-1314.081) (-1325.596) (-1327.344) [-1313.159] * (-1313.821) [-1312.568] (-1331.464) (-1318.587) -- 0:01:59
Average standard deviation of split frequencies: 0.006031
821000 -- (-1306.840) (-1326.617) (-1324.526) [-1314.297] * [-1305.619] (-1337.392) (-1313.323) (-1310.410) -- 0:01:58
822000 -- (-1314.089) (-1324.250) [-1306.368] (-1318.925) * (-1333.296) (-1323.249) (-1304.645) [-1319.243] -- 0:01:58
823000 -- [-1300.830] (-1324.392) (-1324.984) (-1308.110) * [-1314.630] (-1318.848) (-1317.424) (-1326.088) -- 0:01:57
824000 -- [-1305.056] (-1335.454) (-1316.629) (-1307.978) * (-1315.599) (-1312.284) (-1334.893) [-1307.884] -- 0:01:57
825000 -- (-1308.133) (-1331.978) (-1316.102) [-1299.151] * (-1308.803) (-1302.555) (-1331.868) [-1305.706] -- 0:01:56
Average standard deviation of split frequencies: 0.005878
826000 -- (-1305.414) (-1314.237) (-1309.521) [-1308.381] * (-1316.949) [-1302.073] (-1320.912) (-1306.701) -- 0:01:55
827000 -- [-1303.438] (-1321.393) (-1332.310) (-1306.247) * [-1311.898] (-1317.126) (-1319.589) (-1318.786) -- 0:01:55
828000 -- [-1310.343] (-1321.957) (-1333.833) (-1302.719) * (-1313.657) [-1309.678] (-1307.982) (-1323.129) -- 0:01:54
829000 -- (-1318.764) (-1316.602) (-1321.487) [-1314.581] * (-1325.902) (-1318.189) [-1303.194] (-1310.946) -- 0:01:53
830000 -- (-1317.585) [-1304.135] (-1315.972) (-1317.199) * (-1335.101) (-1314.644) (-1322.167) [-1307.056] -- 0:01:53
Average standard deviation of split frequencies: 0.005505
831000 -- (-1320.642) [-1313.818] (-1307.063) (-1323.869) * (-1312.245) (-1316.908) (-1315.732) [-1313.880] -- 0:01:52
832000 -- (-1317.429) (-1315.698) [-1307.045] (-1307.930) * (-1315.706) (-1330.145) (-1315.415) [-1316.305] -- 0:01:52
833000 -- (-1326.335) (-1321.493) [-1306.530] (-1306.611) * (-1318.717) (-1325.774) [-1305.016] (-1321.574) -- 0:01:51
834000 -- [-1307.330] (-1305.355) (-1321.745) (-1315.493) * (-1321.120) (-1320.532) [-1297.786] (-1313.069) -- 0:01:50
835000 -- (-1314.737) [-1302.292] (-1318.280) (-1319.365) * [-1313.546] (-1316.288) (-1309.904) (-1312.185) -- 0:01:49
Average standard deviation of split frequencies: 0.005300
836000 -- (-1315.518) (-1316.674) (-1328.318) [-1318.210] * [-1313.703] (-1317.515) (-1319.605) (-1320.357) -- 0:01:49
837000 -- [-1306.743] (-1311.032) (-1310.000) (-1323.941) * [-1308.864] (-1332.125) (-1316.919) (-1318.865) -- 0:01:48
838000 -- (-1318.558) [-1309.763] (-1319.472) (-1321.015) * [-1306.834] (-1307.440) (-1322.219) (-1313.441) -- 0:01:47
839000 -- (-1329.786) (-1300.382) (-1321.752) [-1309.088] * (-1313.116) [-1302.021] (-1304.956) (-1311.217) -- 0:01:47
840000 -- (-1311.869) [-1315.532] (-1314.587) (-1326.693) * (-1331.770) (-1307.802) [-1304.100] (-1312.262) -- 0:01:46
Average standard deviation of split frequencies: 0.005495
841000 -- (-1318.878) (-1318.007) (-1305.022) [-1311.538] * (-1312.242) (-1317.919) (-1314.605) [-1300.685] -- 0:01:45
842000 -- (-1330.518) (-1321.182) [-1315.030] (-1330.790) * (-1301.580) (-1320.330) (-1327.235) [-1306.226] -- 0:01:45
843000 -- [-1317.730] (-1327.161) (-1307.188) (-1302.486) * [-1312.641] (-1320.692) (-1316.780) (-1306.469) -- 0:01:44
844000 -- (-1327.287) (-1311.027) (-1307.872) [-1305.614] * [-1303.444] (-1307.927) (-1315.209) (-1310.511) -- 0:01:43
845000 -- (-1307.866) (-1307.157) (-1312.824) [-1306.880] * (-1316.244) [-1313.030] (-1321.552) (-1311.577) -- 0:01:43
Average standard deviation of split frequencies: 0.005238
846000 -- (-1313.685) [-1306.248] (-1312.962) (-1316.803) * (-1305.754) [-1314.118] (-1322.514) (-1306.951) -- 0:01:42
847000 -- [-1311.626] (-1311.357) (-1314.601) (-1317.534) * (-1307.530) (-1312.881) (-1311.971) [-1307.040] -- 0:01:41
848000 -- (-1319.792) [-1305.972] (-1314.814) (-1310.946) * (-1315.372) (-1311.645) [-1319.839] (-1318.009) -- 0:01:41
849000 -- (-1318.679) [-1301.573] (-1310.198) (-1318.747) * (-1313.002) (-1325.469) [-1307.688] (-1328.343) -- 0:01:40
850000 -- (-1323.004) [-1307.954] (-1308.475) (-1322.588) * (-1314.610) (-1319.280) (-1325.951) [-1315.203] -- 0:01:39
Average standard deviation of split frequencies: 0.004987
851000 -- (-1313.712) [-1311.909] (-1309.627) (-1326.126) * (-1313.108) (-1316.680) [-1309.299] (-1319.159) -- 0:01:38
852000 -- (-1320.157) (-1311.803) (-1315.852) [-1306.434] * [-1309.931] (-1341.165) (-1313.220) (-1313.356) -- 0:01:38
853000 -- [-1305.154] (-1316.058) (-1311.668) (-1316.404) * (-1329.131) (-1328.369) [-1314.806] (-1302.070) -- 0:01:37
854000 -- (-1305.599) [-1312.141] (-1311.860) (-1323.395) * (-1324.758) [-1314.393] (-1316.712) (-1310.643) -- 0:01:36
855000 -- (-1315.549) (-1313.284) (-1317.412) [-1306.304] * (-1318.074) (-1320.969) [-1303.678] (-1313.568) -- 0:01:36
Average standard deviation of split frequencies: 0.004846
856000 -- [-1304.791] (-1315.915) (-1316.884) (-1309.207) * [-1306.253] (-1316.196) (-1314.313) (-1319.695) -- 0:01:35
857000 -- (-1313.293) (-1314.714) (-1322.297) [-1299.002] * [-1297.147] (-1317.513) (-1324.407) (-1313.264) -- 0:01:34
858000 -- [-1306.573] (-1296.648) (-1308.898) (-1305.170) * (-1301.292) (-1316.003) (-1327.943) [-1305.149] -- 0:01:34
859000 -- (-1316.959) [-1299.252] (-1311.076) (-1311.839) * (-1310.041) [-1308.093] (-1322.292) (-1313.481) -- 0:01:33
860000 -- [-1300.452] (-1311.442) (-1318.197) (-1308.946) * (-1313.435) (-1315.578) [-1311.042] (-1309.527) -- 0:01:32
Average standard deviation of split frequencies: 0.004875
861000 -- [-1303.127] (-1315.117) (-1307.011) (-1324.923) * (-1318.492) (-1327.239) (-1306.089) [-1315.287] -- 0:01:32
862000 -- [-1306.177] (-1315.820) (-1301.000) (-1314.997) * [-1309.746] (-1307.885) (-1302.935) (-1320.400) -- 0:01:31
863000 -- (-1312.506) (-1320.992) [-1312.713] (-1302.281) * (-1312.785) (-1327.959) (-1310.410) [-1304.326] -- 0:01:30
864000 -- (-1307.037) (-1325.738) [-1306.853] (-1308.918) * (-1331.831) (-1334.957) (-1316.296) [-1312.177] -- 0:01:30
865000 -- (-1312.256) (-1325.249) (-1311.058) [-1308.320] * (-1321.329) (-1321.669) (-1322.447) [-1312.920] -- 0:01:29
Average standard deviation of split frequencies: 0.004845
866000 -- (-1309.861) (-1313.063) [-1314.241] (-1307.141) * [-1308.636] (-1317.722) (-1329.038) (-1314.761) -- 0:01:28
867000 -- (-1308.739) [-1302.245] (-1322.705) (-1312.573) * (-1305.856) [-1316.760] (-1323.628) (-1309.257) -- 0:01:28
868000 -- (-1328.849) (-1323.257) (-1314.844) [-1318.641] * (-1316.935) (-1321.979) (-1319.261) [-1307.013] -- 0:01:27
869000 -- [-1312.553] (-1327.326) (-1307.021) (-1311.134) * (-1313.657) [-1300.031] (-1309.051) (-1310.991) -- 0:01:26
870000 -- (-1314.028) (-1323.550) [-1306.561] (-1319.902) * (-1323.289) (-1307.553) (-1300.631) [-1304.628] -- 0:01:26
Average standard deviation of split frequencies: 0.005198
871000 -- (-1314.356) (-1313.611) (-1318.894) [-1313.068] * (-1313.687) (-1319.357) [-1320.519] (-1301.460) -- 0:01:25
872000 -- (-1310.012) [-1320.285] (-1320.538) (-1320.044) * (-1314.856) (-1316.574) [-1310.562] (-1321.760) -- 0:01:24
873000 -- (-1308.410) (-1314.183) [-1314.009] (-1320.804) * [-1305.024] (-1308.123) (-1312.429) (-1321.546) -- 0:01:24
874000 -- (-1304.028) (-1313.843) (-1326.270) [-1297.573] * (-1317.514) (-1314.676) (-1327.893) [-1310.732] -- 0:01:23
875000 -- [-1314.293] (-1331.276) (-1334.769) (-1312.429) * (-1310.344) (-1307.574) (-1320.454) [-1309.947] -- 0:01:22
Average standard deviation of split frequencies: 0.005112
876000 -- [-1304.980] (-1314.554) (-1323.650) (-1309.704) * (-1307.404) (-1315.239) (-1316.401) [-1312.683] -- 0:01:22
877000 -- [-1303.817] (-1315.506) (-1336.763) (-1329.146) * (-1307.517) [-1321.058] (-1318.017) (-1305.778) -- 0:01:21
878000 -- (-1314.402) (-1325.394) (-1317.551) [-1313.280] * (-1313.980) (-1322.506) (-1325.561) [-1307.886] -- 0:01:20
879000 -- (-1326.470) [-1305.557] (-1317.199) (-1310.674) * (-1315.070) [-1302.825] (-1321.483) (-1306.555) -- 0:01:19
880000 -- (-1320.799) [-1302.071] (-1337.787) (-1319.130) * (-1317.504) (-1319.460) [-1311.138] (-1314.000) -- 0:01:19
Average standard deviation of split frequencies: 0.005246
881000 -- (-1317.685) [-1311.730] (-1316.687) (-1303.566) * [-1307.295] (-1317.720) (-1313.064) (-1321.925) -- 0:01:18
882000 -- (-1310.807) (-1331.151) [-1312.777] (-1302.525) * [-1309.649] (-1313.958) (-1301.515) (-1324.938) -- 0:01:17
883000 -- (-1313.200) [-1302.894] (-1320.356) (-1305.692) * [-1305.507] (-1309.631) (-1307.929) (-1326.240) -- 0:01:17
884000 -- (-1319.414) (-1316.735) [-1308.532] (-1325.380) * (-1307.110) (-1320.324) (-1307.398) [-1314.385] -- 0:01:16
885000 -- (-1306.011) (-1317.906) [-1304.955] (-1313.031) * (-1322.045) (-1307.593) [-1301.305] (-1310.619) -- 0:01:16
Average standard deviation of split frequencies: 0.005799
886000 -- [-1300.217] (-1325.942) (-1325.315) (-1325.423) * (-1307.646) (-1322.672) [-1307.997] (-1313.696) -- 0:01:15
887000 -- [-1305.846] (-1329.509) (-1327.481) (-1314.618) * (-1314.148) [-1313.477] (-1315.284) (-1323.948) -- 0:01:14
888000 -- (-1309.504) (-1322.223) [-1313.246] (-1312.644) * (-1305.061) (-1307.420) (-1322.455) [-1320.441] -- 0:01:14
889000 -- [-1313.749] (-1317.554) (-1324.451) (-1307.521) * (-1332.680) [-1309.695] (-1317.631) (-1313.790) -- 0:01:13
890000 -- (-1311.568) (-1319.067) [-1305.027] (-1320.707) * (-1328.865) [-1306.383] (-1320.197) (-1313.180) -- 0:01:12
Average standard deviation of split frequencies: 0.005716
891000 -- [-1309.452] (-1318.986) (-1320.790) (-1309.382) * (-1312.984) [-1304.212] (-1306.178) (-1310.543) -- 0:01:12
892000 -- [-1306.670] (-1315.894) (-1326.126) (-1313.484) * [-1312.168] (-1317.904) (-1304.672) (-1313.968) -- 0:01:11
893000 -- (-1310.812) (-1324.311) (-1315.003) [-1305.691] * [-1314.547] (-1314.000) (-1317.864) (-1315.329) -- 0:01:10
894000 -- (-1322.140) (-1304.211) [-1306.295] (-1322.527) * (-1316.613) (-1324.174) [-1300.163] (-1322.807) -- 0:01:10
895000 -- (-1324.815) (-1310.699) (-1315.998) [-1306.323] * [-1316.053] (-1332.627) (-1306.544) (-1315.384) -- 0:01:09
Average standard deviation of split frequencies: 0.005524
896000 -- (-1319.095) [-1310.840] (-1317.368) (-1326.624) * (-1315.183) [-1307.815] (-1313.300) (-1323.920) -- 0:01:08
897000 -- (-1319.426) [-1317.582] (-1312.196) (-1325.236) * [-1304.404] (-1317.163) (-1319.835) (-1314.079) -- 0:01:08
898000 -- (-1317.836) (-1319.216) [-1316.329] (-1318.099) * (-1307.356) [-1309.346] (-1317.269) (-1301.760) -- 0:01:07
899000 -- (-1310.725) (-1324.548) (-1313.844) [-1309.397] * (-1307.928) [-1306.644] (-1315.311) (-1317.026) -- 0:01:06
900000 -- (-1306.518) (-1328.690) (-1318.370) [-1305.548] * (-1316.380) (-1320.411) (-1310.665) [-1302.464] -- 0:01:06
Average standard deviation of split frequencies: 0.005339
901000 -- [-1304.815] (-1325.424) (-1325.128) (-1308.142) * (-1330.767) (-1306.423) (-1320.048) [-1311.989] -- 0:01:05
902000 -- [-1301.935] (-1319.490) (-1337.176) (-1315.195) * (-1308.166) (-1311.071) (-1314.753) [-1317.925] -- 0:01:04
903000 -- (-1299.333) [-1316.090] (-1310.615) (-1309.276) * (-1310.257) (-1319.730) (-1308.839) [-1310.498] -- 0:01:04
904000 -- (-1306.810) [-1315.604] (-1312.344) (-1323.605) * (-1309.406) (-1316.643) [-1317.218] (-1318.912) -- 0:01:03
905000 -- [-1316.784] (-1313.643) (-1311.961) (-1339.054) * (-1309.512) [-1306.966] (-1316.869) (-1311.758) -- 0:01:03
Average standard deviation of split frequencies: 0.005099
906000 -- (-1324.382) (-1310.561) [-1304.687] (-1323.109) * (-1319.679) [-1307.186] (-1309.650) (-1322.811) -- 0:01:02
907000 -- [-1310.934] (-1331.335) (-1312.645) (-1317.830) * (-1298.852) (-1327.841) [-1299.287] (-1316.616) -- 0:01:01
908000 -- (-1313.009) [-1308.432] (-1317.363) (-1318.151) * [-1295.730] (-1321.338) (-1314.642) (-1326.908) -- 0:01:01
909000 -- (-1309.495) [-1304.124] (-1308.186) (-1318.087) * (-1305.690) [-1318.008] (-1309.275) (-1319.461) -- 0:01:00
910000 -- (-1316.661) (-1316.926) (-1325.246) [-1312.590] * [-1304.037] (-1321.882) (-1317.389) (-1321.637) -- 0:00:59
Average standard deviation of split frequencies: 0.004711
911000 -- (-1313.484) (-1332.794) [-1311.323] (-1316.220) * (-1313.569) (-1326.406) [-1302.315] (-1315.827) -- 0:00:59
912000 -- [-1305.995] (-1318.105) (-1315.638) (-1326.018) * [-1307.570] (-1315.367) (-1309.994) (-1314.177) -- 0:00:58
913000 -- [-1314.150] (-1323.769) (-1316.499) (-1312.445) * [-1306.721] (-1325.707) (-1323.591) (-1305.049) -- 0:00:57
914000 -- (-1313.392) (-1330.430) (-1309.889) [-1313.927] * (-1320.806) [-1312.679] (-1317.148) (-1314.400) -- 0:00:57
915000 -- (-1326.515) (-1317.694) (-1318.330) [-1316.135] * (-1309.363) (-1325.450) (-1317.871) [-1305.756] -- 0:00:56
Average standard deviation of split frequencies: 0.004889
916000 -- (-1336.802) (-1306.652) [-1318.606] (-1316.704) * (-1313.308) (-1330.411) [-1317.023] (-1311.122) -- 0:00:55
917000 -- (-1307.303) [-1303.871] (-1318.087) (-1306.535) * (-1315.042) (-1325.687) [-1305.644] (-1316.171) -- 0:00:55
918000 -- (-1314.088) (-1309.767) (-1319.008) [-1316.235] * (-1314.687) (-1323.779) [-1301.073] (-1320.043) -- 0:00:54
919000 -- [-1308.074] (-1309.479) (-1320.590) (-1305.948) * (-1316.571) (-1317.456) (-1320.456) [-1307.787] -- 0:00:54
920000 -- [-1306.720] (-1314.234) (-1312.301) (-1307.785) * (-1316.515) (-1317.035) (-1319.147) [-1321.018] -- 0:00:53
Average standard deviation of split frequencies: 0.004711
921000 -- (-1308.542) [-1304.054] (-1330.769) (-1313.641) * (-1315.368) [-1308.753] (-1311.051) (-1330.282) -- 0:00:52
922000 -- (-1318.894) (-1307.353) (-1312.560) [-1306.417] * [-1303.070] (-1316.354) (-1327.874) (-1328.509) -- 0:00:52
923000 -- (-1316.226) (-1325.100) [-1314.258] (-1323.157) * (-1314.836) [-1312.593] (-1323.477) (-1307.308) -- 0:00:51
924000 -- [-1311.887] (-1327.555) (-1308.149) (-1318.422) * (-1308.445) [-1309.168] (-1320.446) (-1314.864) -- 0:00:50
925000 -- [-1309.300] (-1318.187) (-1318.791) (-1311.983) * (-1314.092) [-1315.820] (-1312.445) (-1332.494) -- 0:00:50
Average standard deviation of split frequencies: 0.004633
926000 -- (-1322.633) [-1301.689] (-1326.387) (-1317.274) * [-1314.690] (-1309.354) (-1307.310) (-1324.827) -- 0:00:49
927000 -- (-1310.274) [-1302.683] (-1312.111) (-1313.121) * [-1313.508] (-1304.788) (-1311.373) (-1321.294) -- 0:00:48
928000 -- [-1305.784] (-1318.745) (-1323.111) (-1317.680) * [-1303.209] (-1303.146) (-1312.990) (-1320.697) -- 0:00:48
929000 -- [-1304.474] (-1309.512) (-1316.674) (-1314.097) * [-1310.203] (-1319.848) (-1308.818) (-1322.318) -- 0:00:47
930000 -- (-1308.672) [-1313.260] (-1323.280) (-1308.690) * (-1313.626) (-1306.218) (-1318.930) [-1313.863] -- 0:00:46
Average standard deviation of split frequencies: 0.004964
931000 -- (-1316.127) (-1308.710) (-1330.487) [-1301.527] * [-1308.900] (-1300.135) (-1316.760) (-1321.473) -- 0:00:46
932000 -- (-1319.101) (-1305.521) (-1329.107) [-1312.626] * [-1315.883] (-1317.494) (-1330.375) (-1316.850) -- 0:00:45
933000 -- (-1327.150) (-1315.313) [-1320.090] (-1300.288) * (-1309.048) (-1306.540) (-1323.704) [-1315.660] -- 0:00:44
934000 -- (-1315.555) [-1302.588] (-1308.386) (-1313.566) * [-1314.480] (-1314.069) (-1316.401) (-1319.624) -- 0:00:44
935000 -- (-1335.868) [-1299.074] (-1326.006) (-1331.735) * (-1314.989) [-1307.544] (-1321.320) (-1328.577) -- 0:00:43
Average standard deviation of split frequencies: 0.004986
936000 -- (-1326.088) [-1300.539] (-1329.125) (-1336.523) * [-1303.182] (-1316.825) (-1315.965) (-1319.106) -- 0:00:42
937000 -- [-1301.909] (-1307.692) (-1340.214) (-1321.405) * (-1318.636) [-1313.241] (-1333.225) (-1311.627) -- 0:00:42
938000 -- [-1308.254] (-1311.373) (-1314.239) (-1326.768) * (-1317.274) [-1313.212] (-1315.969) (-1325.738) -- 0:00:41
939000 -- [-1307.159] (-1298.813) (-1329.909) (-1310.369) * (-1312.230) [-1303.629] (-1325.480) (-1312.786) -- 0:00:40
940000 -- (-1309.409) (-1317.932) [-1306.112] (-1337.788) * [-1308.152] (-1316.877) (-1310.274) (-1323.575) -- 0:00:40
Average standard deviation of split frequencies: 0.005412
941000 -- (-1304.701) [-1304.680] (-1319.197) (-1304.587) * (-1317.400) (-1322.741) (-1324.899) [-1307.582] -- 0:00:39
942000 -- [-1309.238] (-1314.734) (-1312.338) (-1309.935) * (-1312.962) [-1309.678] (-1314.341) (-1310.940) -- 0:00:38
943000 -- (-1312.664) [-1305.985] (-1316.398) (-1309.289) * (-1305.352) [-1304.859] (-1313.894) (-1318.662) -- 0:00:38
944000 -- (-1323.309) (-1320.986) [-1305.283] (-1320.416) * (-1312.011) [-1311.911] (-1311.129) (-1310.324) -- 0:00:37
945000 -- [-1306.422] (-1309.983) (-1309.187) (-1325.213) * (-1328.606) (-1310.666) (-1320.711) [-1301.896] -- 0:00:36
Average standard deviation of split frequencies: 0.005282
946000 -- (-1313.344) (-1308.182) (-1321.094) [-1313.714] * (-1323.130) (-1315.238) (-1320.371) [-1309.530] -- 0:00:36
947000 -- (-1307.691) (-1337.110) [-1307.533] (-1327.513) * (-1317.262) (-1320.552) [-1315.775] (-1323.361) -- 0:00:35
948000 -- [-1301.745] (-1336.740) (-1320.089) (-1318.136) * (-1326.868) (-1351.497) (-1325.112) [-1314.657] -- 0:00:34
949000 -- (-1314.394) (-1314.783) (-1310.828) [-1311.986] * (-1314.098) (-1324.598) (-1329.229) [-1300.854] -- 0:00:34
950000 -- [-1308.259] (-1316.744) (-1307.977) (-1320.101) * (-1309.724) [-1307.478] (-1309.336) (-1316.428) -- 0:00:33
Average standard deviation of split frequencies: 0.005058
951000 -- [-1313.477] (-1319.588) (-1322.465) (-1303.050) * (-1309.010) [-1309.193] (-1324.083) (-1318.361) -- 0:00:32
952000 -- (-1318.912) (-1309.662) (-1311.906) [-1305.843] * [-1307.273] (-1324.122) (-1323.714) (-1314.981) -- 0:00:32
953000 -- (-1329.648) [-1302.703] (-1310.708) (-1302.741) * (-1310.896) (-1319.124) (-1314.268) [-1305.101] -- 0:00:31
954000 -- (-1320.962) (-1304.015) (-1309.254) [-1301.527] * (-1317.066) [-1316.706] (-1322.123) (-1305.325) -- 0:00:30
955000 -- (-1315.495) [-1305.976] (-1329.908) (-1309.998) * (-1322.263) (-1314.980) (-1322.090) [-1310.822] -- 0:00:30
Average standard deviation of split frequencies: 0.005128
956000 -- (-1308.380) (-1318.450) [-1316.653] (-1312.102) * [-1303.861] (-1317.155) (-1312.215) (-1306.013) -- 0:00:29
957000 -- [-1301.937] (-1319.795) (-1327.685) (-1300.138) * (-1313.525) (-1316.044) (-1319.102) [-1311.881] -- 0:00:28
958000 -- (-1311.724) (-1329.443) (-1310.824) [-1301.473] * (-1308.008) [-1310.386] (-1345.015) (-1315.391) -- 0:00:28
959000 -- (-1315.221) (-1332.799) (-1313.789) [-1310.468] * (-1331.024) (-1309.946) (-1314.177) [-1312.068] -- 0:00:27
960000 -- (-1316.999) (-1322.634) [-1309.008] (-1321.202) * (-1333.480) (-1303.680) (-1314.900) [-1301.476] -- 0:00:26
Average standard deviation of split frequencies: 0.005201
961000 -- (-1317.354) (-1317.606) (-1319.592) [-1316.944] * (-1319.869) (-1312.104) (-1310.643) [-1302.369] -- 0:00:26
962000 -- (-1307.215) (-1310.448) (-1325.208) [-1311.558] * [-1305.831] (-1308.458) (-1327.999) (-1339.924) -- 0:00:25
963000 -- [-1308.763] (-1320.810) (-1310.011) (-1302.776) * [-1312.248] (-1312.155) (-1309.523) (-1318.479) -- 0:00:24
964000 -- (-1318.585) (-1325.363) (-1309.279) [-1299.475] * (-1305.856) [-1306.835] (-1314.537) (-1317.780) -- 0:00:24
965000 -- (-1318.443) (-1324.766) [-1303.281] (-1307.076) * (-1302.376) [-1304.758] (-1311.624) (-1310.989) -- 0:00:23
Average standard deviation of split frequencies: 0.005124
966000 -- (-1318.476) (-1309.421) [-1313.399] (-1317.484) * (-1318.521) (-1305.533) [-1311.775] (-1304.419) -- 0:00:22
967000 -- [-1312.130] (-1321.903) (-1323.909) (-1322.613) * (-1320.313) (-1315.463) [-1305.619] (-1305.478) -- 0:00:22
968000 -- (-1316.875) [-1310.603] (-1320.837) (-1311.785) * (-1317.743) (-1308.363) [-1310.150] (-1321.339) -- 0:00:21
969000 -- (-1314.854) (-1324.760) (-1326.580) [-1307.962] * (-1309.274) [-1310.340] (-1312.460) (-1313.503) -- 0:00:20
970000 -- (-1312.218) (-1326.599) (-1326.485) [-1314.977] * (-1309.849) [-1301.608] (-1312.265) (-1335.744) -- 0:00:20
Average standard deviation of split frequencies: 0.005099
971000 -- (-1311.679) (-1317.297) [-1311.782] (-1303.827) * (-1325.141) (-1305.860) (-1332.408) [-1309.285] -- 0:00:19
972000 -- (-1309.159) (-1330.690) [-1312.265] (-1316.601) * (-1326.882) [-1307.737] (-1321.558) (-1310.657) -- 0:00:18
973000 -- [-1309.705] (-1316.581) (-1333.809) (-1307.442) * (-1317.592) (-1306.271) [-1307.473] (-1322.861) -- 0:00:18
974000 -- [-1305.578] (-1309.499) (-1309.378) (-1300.933) * (-1316.494) (-1316.125) [-1303.744] (-1305.016) -- 0:00:17
975000 -- (-1306.503) (-1332.576) [-1316.079] (-1307.134) * (-1315.461) (-1313.179) [-1300.730] (-1310.305) -- 0:00:16
Average standard deviation of split frequencies: 0.004927
976000 -- (-1320.014) (-1316.886) (-1303.827) [-1302.792] * [-1317.441] (-1304.003) (-1307.835) (-1326.356) -- 0:00:16
977000 -- (-1319.125) (-1323.156) [-1304.411] (-1319.874) * (-1316.150) [-1307.777] (-1315.969) (-1307.631) -- 0:00:15
978000 -- (-1323.772) (-1313.161) [-1311.133] (-1314.622) * (-1320.866) (-1305.028) (-1308.383) [-1304.327] -- 0:00:14
979000 -- (-1315.095) (-1308.803) [-1307.192] (-1316.221) * (-1317.588) (-1330.580) (-1310.263) [-1307.501] -- 0:00:14
980000 -- (-1306.742) (-1316.004) (-1318.586) [-1303.987] * (-1322.915) (-1321.214) [-1310.558] (-1308.153) -- 0:00:13
Average standard deviation of split frequencies: 0.005192
981000 -- [-1318.245] (-1319.097) (-1314.600) (-1318.570) * (-1320.510) (-1309.215) [-1307.113] (-1310.901) -- 0:00:12
982000 -- (-1319.183) (-1312.302) [-1300.741] (-1320.012) * [-1314.536] (-1306.015) (-1317.636) (-1322.677) -- 0:00:12
983000 -- (-1331.003) [-1314.775] (-1309.659) (-1312.568) * (-1324.622) [-1315.826] (-1316.601) (-1314.905) -- 0:00:11
984000 -- (-1321.782) [-1306.582] (-1303.497) (-1309.213) * (-1304.220) [-1305.497] (-1307.681) (-1340.832) -- 0:00:10
985000 -- (-1316.186) [-1296.267] (-1306.036) (-1316.623) * (-1322.664) [-1307.430] (-1333.766) (-1325.566) -- 0:00:10
Average standard deviation of split frequencies: 0.005355
986000 -- (-1306.131) (-1319.683) (-1323.083) [-1308.082] * (-1323.949) (-1318.346) [-1309.776] (-1324.144) -- 0:00:09
987000 -- [-1310.364] (-1326.935) (-1313.378) (-1308.725) * (-1324.635) (-1315.279) (-1312.750) [-1322.034] -- 0:00:08
988000 -- (-1312.468) (-1330.655) (-1312.139) [-1305.129] * [-1307.549] (-1317.758) (-1322.747) (-1313.036) -- 0:00:08
989000 -- (-1311.207) (-1321.279) [-1301.249] (-1316.064) * (-1307.410) (-1305.759) (-1313.632) [-1314.862] -- 0:00:07
990000 -- (-1310.568) (-1323.606) [-1312.182] (-1324.175) * (-1315.798) [-1305.561] (-1311.184) (-1317.767) -- 0:00:06
Average standard deviation of split frequencies: 0.005139
991000 -- (-1317.515) (-1324.816) (-1314.371) [-1312.804] * (-1319.319) [-1316.538] (-1309.713) (-1314.022) -- 0:00:06
992000 -- (-1324.162) (-1324.158) [-1315.650] (-1314.295) * (-1314.980) (-1308.379) (-1321.444) [-1306.778] -- 0:00:05
993000 -- (-1315.599) (-1307.164) [-1312.197] (-1319.078) * (-1322.188) (-1314.420) (-1326.082) [-1307.317] -- 0:00:04
994000 -- (-1327.679) (-1330.874) (-1314.317) [-1308.736] * [-1314.934] (-1308.095) (-1314.854) (-1318.959) -- 0:00:04
995000 -- (-1313.760) (-1327.740) [-1304.016] (-1321.399) * (-1316.782) (-1325.125) (-1307.502) [-1302.789] -- 0:00:03
Average standard deviation of split frequencies: 0.005206
996000 -- [-1307.546] (-1318.438) (-1311.455) (-1316.889) * (-1314.446) (-1318.473) [-1319.910] (-1301.603) -- 0:00:02
997000 -- (-1322.897) (-1310.461) [-1310.221] (-1309.197) * (-1324.433) (-1320.778) [-1307.742] (-1321.641) -- 0:00:02
998000 -- (-1319.194) (-1319.987) (-1320.380) [-1305.554] * (-1309.897) (-1314.368) (-1307.030) [-1310.476] -- 0:00:01
999000 -- [-1311.560] (-1327.343) (-1320.458) (-1308.760) * [-1298.133] (-1312.093) (-1332.270) (-1326.636) -- 0:00:00
1000000 -- (-1320.655) (-1318.796) [-1311.289] (-1307.795) * [-1299.732] (-1318.045) (-1306.180) (-1323.019) -- 0:00:00
Average standard deviation of split frequencies: 0.005088
Analysis completed in 11 mins 8 seconds
Analysis used 666.96 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -1292.07
Likelihood of best state for "cold" chain of run 2 was -1293.82
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
66.4 % ( 63 %) Dirichlet(Revmat{all})
80.0 % ( 75 %) Slider(Revmat{all})
27.5 % ( 24 %) Dirichlet(Pi{all})
30.0 % ( 21 %) Slider(Pi{all})
80.1 % ( 59 %) Multiplier(Alpha{1,2})
71.7 % ( 49 %) Multiplier(Alpha{3})
91.3 % ( 78 %) Slider(Pinvar{all})
72.0 % ( 80 %) ExtSPR(Tau{all},V{all})
69.1 % ( 75 %) ExtTBR(Tau{all},V{all})
77.2 % ( 81 %) NNI(Tau{all},V{all})
71.0 % ( 79 %) ParsSPR(Tau{all},V{all})
27.5 % ( 30 %) Multiplier(V{all})
78.8 % ( 71 %) Nodeslider(V{all})
26.5 % ( 26 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
66.3 % ( 60 %) Dirichlet(Revmat{all})
79.3 % ( 71 %) Slider(Revmat{all})
28.3 % ( 30 %) Dirichlet(Pi{all})
30.1 % ( 28 %) Slider(Pi{all})
79.4 % ( 60 %) Multiplier(Alpha{1,2})
71.3 % ( 46 %) Multiplier(Alpha{3})
91.0 % ( 89 %) Slider(Pinvar{all})
72.4 % ( 72 %) ExtSPR(Tau{all},V{all})
69.2 % ( 70 %) ExtTBR(Tau{all},V{all})
77.2 % ( 72 %) NNI(Tau{all},V{all})
70.9 % ( 74 %) ParsSPR(Tau{all},V{all})
27.6 % ( 21 %) Multiplier(V{all})
78.9 % ( 80 %) Nodeslider(V{all})
26.0 % ( 25 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.47 0.16 0.04
2 | 166953 0.49 0.18
3 | 166392 166102 0.51
4 | 166472 166972 167109
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.47 0.16 0.04
2 | 166114 0.50 0.19
3 | 167208 165912 0.52
4 | 166646 167087 167033
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -1305.55
| 1 |
| 1 2 1 1 |
| 1 2 |
| 1 11 1 1 2 |
| 2 2 1 2 1 2 1 2 2 1 1 |
| 1 1 2 1 1 1* 2 2 1 * 2 |
| 2 2 * 1 1 2 2 2 1 |
|2 2 11 1 2 2 1 2 2 * 2 2 2 2 1 22|
| 12 22 22 2 22 21 1 2 2 1 1 21 |
| 1 1 2 1 * 1 2 |
| 1 1 2 1 2 * * 1 |
|1 2 1221 1 2 1 1|
| 2 2 1 1 |
| 1 2 |
| 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -1311.77
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1300.41 -1319.36
2 -1300.43 -1320.87
--------------------------------------
TOTAL -1300.42 -1320.38
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.076140 0.000149 0.053899 0.100009 0.075116 1285.71 1321.69 1.000
r(A<->C){all} 0.137483 0.002801 0.045178 0.238309 0.130978 508.98 551.43 1.001
r(A<->G){all} 0.167082 0.002936 0.068154 0.271167 0.163665 523.71 577.92 1.002
r(A<->T){all} 0.114804 0.001706 0.037762 0.194427 0.111247 831.19 837.75 1.000
r(C<->G){all} 0.106598 0.002084 0.026648 0.193759 0.100501 360.75 463.85 1.002
r(C<->T){all} 0.365612 0.004370 0.235394 0.492322 0.363366 608.89 612.39 1.000
r(G<->T){all} 0.108420 0.001594 0.039431 0.190899 0.103180 655.15 672.56 1.001
pi(A){all} 0.219769 0.000231 0.189476 0.248068 0.219464 954.97 977.78 1.000
pi(C){all} 0.220062 0.000246 0.188979 0.249649 0.219458 1230.66 1235.43 1.000
pi(G){all} 0.232471 0.000261 0.199546 0.262412 0.232373 1096.81 1119.79 1.000
pi(T){all} 0.327699 0.000295 0.295398 0.361517 0.327326 1007.37 1068.95 1.000
alpha{1,2} 0.779644 0.752872 0.000217 2.512613 0.489435 1089.93 1109.33 1.000
alpha{3} 1.444429 1.301131 0.002920 3.812072 1.135705 1104.57 1221.85 1.000
pinvar{all} 0.295641 0.033936 0.000494 0.610508 0.281960 852.94 860.35 1.004
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C65
2 -- C31
3 -- C71
4 -- C168
5 -- C144
6 -- C117
7 -- C180
8 -- C660
9 -- C547
10 -- C363
11 -- C489
12 -- C337
13 -- C60
14 -- C302
15 -- C440
16 -- C126
17 -- C506
18 -- C552
19 -- C372
20 -- C274
21 -- C124
22 -- C103
23 -- C130
24 -- C247
25 -- C562
26 -- C624
27 -- C298
28 -- C505
29 -- C648
30 -- C310
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------------------------
1 -- .*****************************
2 -- .*............................
3 -- ..*...........................
4 -- ...*..........................
5 -- ....*.........................
6 -- .....*........................
7 -- ......*.......................
8 -- .......*......................
9 -- ........*.....................
10 -- .........*....................
11 -- ..........*...................
12 -- ...........*..................
13 -- ............*.................
14 -- .............*................
15 -- ..............*...............
16 -- ...............*..............
17 -- ................*.............
18 -- .................*............
19 -- ..................*...........
20 -- ...................*..........
21 -- ....................*.........
22 -- .....................*........
23 -- ......................*.......
24 -- .......................*......
25 -- ........................*.....
26 -- .........................*....
27 -- ..........................*...
28 -- ...........................*..
29 -- ............................*.
30 -- .............................*
31 -- ..........*........**.........
32 -- ...*.*....*....*...**.*.......
33 -- ...*.*.........*......*.......
34 -- ..........*.........*.........
35 -- ...*.*.........*..............
36 -- ......*....*..................
37 -- ...*...........*..............
38 -- ...*.*........................
39 -- ..*....*......................
40 -- .....*.........*..............
------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 3002 1.000000 0.000000 1.000000 1.000000 2
33 3000 0.999334 0.000942 0.998668 1.000000 2
34 2995 0.997668 0.001413 0.996669 0.998668 2
35 2870 0.956029 0.004711 0.952698 0.959360 2
36 2785 0.927715 0.008951 0.921386 0.934044 2
37 1012 0.337109 0.002827 0.335110 0.339107 2
38 971 0.323451 0.010835 0.315789 0.331113 2
39 966 0.321785 0.007537 0.316456 0.327115 2
40 965 0.321452 0.013662 0.311792 0.331113 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.000705 0.000001 0.000001 0.002161 0.000496 1.000 2
length{all}[2] 0.001462 0.000001 0.000027 0.003372 0.001239 1.000 2
length{all}[3] 0.004773 0.000004 0.001504 0.008681 0.004521 1.000 2
length{all}[4] 0.000704 0.000001 0.000000 0.002175 0.000486 1.000 2
length{all}[5] 0.001461 0.000001 0.000038 0.003491 0.001228 1.000 2
length{all}[6] 0.000712 0.000001 0.000001 0.002129 0.000482 1.000 2
length{all}[7] 0.000788 0.000001 0.000000 0.002319 0.000534 1.000 2
length{all}[8] 0.003362 0.000003 0.000780 0.006726 0.003088 1.003 2
length{all}[9] 0.000720 0.000001 0.000000 0.002185 0.000493 1.000 2
length{all}[10] 0.000725 0.000001 0.000000 0.002174 0.000486 1.000 2
length{all}[11] 0.000717 0.000001 0.000001 0.002078 0.000503 1.000 2
length{all}[12] 0.000783 0.000001 0.000000 0.002354 0.000535 1.000 2
length{all}[13] 0.001363 0.000001 0.000013 0.003271 0.001138 1.000 2
length{all}[14] 0.000697 0.000001 0.000000 0.002123 0.000463 1.000 2
length{all}[15] 0.001398 0.000001 0.000014 0.003307 0.001187 1.000 2
length{all}[16] 0.000705 0.000000 0.000000 0.002184 0.000489 1.000 2
length{all}[17] 0.000703 0.000001 0.000000 0.002129 0.000467 1.001 2
length{all}[18] 0.000723 0.000000 0.000000 0.002154 0.000510 1.000 2
length{all}[19] 0.000715 0.000001 0.000002 0.002152 0.000490 1.000 2
length{all}[20] 0.007914 0.000007 0.003409 0.013538 0.007543 1.000 2
length{all}[21] 0.002886 0.000002 0.000543 0.005711 0.002662 1.000 2
length{all}[22] 0.001434 0.000001 0.000031 0.003460 0.001190 1.004 2
length{all}[23] 0.000787 0.000001 0.000000 0.002389 0.000531 1.002 2
length{all}[24] 0.001388 0.000001 0.000014 0.003340 0.001153 1.000 2
length{all}[25] 0.001426 0.000001 0.000031 0.003391 0.001199 1.000 2
length{all}[26] 0.000711 0.000001 0.000000 0.002117 0.000495 1.000 2
length{all}[27] 0.000720 0.000001 0.000000 0.002283 0.000477 1.000 2
length{all}[28] 0.000721 0.000001 0.000000 0.002142 0.000497 1.000 2
length{all}[29] 0.000731 0.000001 0.000000 0.002152 0.000483 1.002 2
length{all}[30] 0.002158 0.000002 0.000296 0.004704 0.001910 1.002 2
length{all}[31] 0.004278 0.000004 0.001105 0.007942 0.004001 1.000 2
length{all}[32] 0.004984 0.000004 0.001379 0.008869 0.004738 1.000 2
length{all}[33] 0.002392 0.000002 0.000233 0.005295 0.002089 1.000 2
length{all}[34] 0.002347 0.000002 0.000098 0.005143 0.002040 1.001 2
length{all}[35] 0.001435 0.000001 0.000005 0.003436 0.001176 1.001 2
length{all}[36] 0.001405 0.000001 0.000036 0.003339 0.001166 1.000 2
length{all}[37] 0.000716 0.000001 0.000002 0.002073 0.000499 1.000 2
length{all}[38] 0.000746 0.000001 0.000002 0.002255 0.000507 1.000 2
length{all}[39] 0.001410 0.000001 0.000017 0.003373 0.001150 1.000 2
length{all}[40] 0.000652 0.000000 0.000000 0.002051 0.000437 1.003 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.005088
Maximum standard deviation of split frequencies = 0.013662
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.004
Clade credibility values:
/--------------------------------------------------------------------- C65 (1)
|
|--------------------------------------------------------------------- C31 (2)
|
|--------------------------------------------------------------------- C71 (3)
|
|--------------------------------------------------------------------- C144 (5)
|
|--------------------------------------------------------------------- C660 (8)
|
|--------------------------------------------------------------------- C547 (9)
|
|--------------------------------------------------------------------- C363 (10)
|
|--------------------------------------------------------------------- C60 (13)
|
|--------------------------------------------------------------------- C302 (14)
|
|--------------------------------------------------------------------- C440 (15)
|
|--------------------------------------------------------------------- C506 (17)
|
|--------------------------------------------------------------------- C552 (18)
|
|--------------------------------------------------------------------- C372 (19)
|
|--------------------------------------------------------------------- C103 (22)
|
|--------------------------------------------------------------------- C247 (24)
+
|--------------------------------------------------------------------- C562 (25)
|
|--------------------------------------------------------------------- C624 (26)
|
|--------------------------------------------------------------------- C298 (27)
|
|--------------------------------------------------------------------- C505 (28)
|
|--------------------------------------------------------------------- C648 (29)
|
|--------------------------------------------------------------------- C310 (30)
|
| /----------------- C168 (4)
| |
| /-------96-------+----------------- C117 (6)
| | |
| /-------100-------+ \----------------- C126 (16)
| | |
| | \---------------------------------- C130 (23)
| |
|-------100------+ /----------------- C489 (11)
| | /-------100------+
| | | \----------------- C124 (21)
| \-------100-------+
| \---------------------------------- C274 (20)
|
| /----------------- C180 (7)
\-------------------------93------------------------+
\----------------- C337 (12)
Phylogram (based on average branch lengths):
/-- C65 (1)
|
|----- C31 (2)
|
|------------------- C71 (3)
|
|----- C144 (5)
|
|------------- C660 (8)
|
|-- C547 (9)
|
|-- C363 (10)
|
|----- C60 (13)
|
|-- C302 (14)
|
|----- C440 (15)
|
|-- C506 (17)
|
|-- C552 (18)
|
|-- C372 (19)
|
|----- C103 (22)
|
|----- C247 (24)
+
|----- C562 (25)
|
|-- C624 (26)
|
|-- C298 (27)
|
|-- C505 (28)
|
|-- C648 (29)
|
|-------- C310 (30)
|
| /-- C168 (4)
| |
| /----+-- C117 (6)
| | |
| /--------+ \-- C126 (16)
| | |
| | \-- C130 (23)
| |
|-------------------+ /-- C489 (11)
| | /--------+
| | | \----------- C124 (21)
| \----------------+
| \-------------------------------- C274 (20)
|
| /-- C180 (7)
\----+
\-- C337 (12)
|-------| 0.002 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Thu Nov 17 16:36:16 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result--
-- Starting log on Fri Nov 18 05:12:18 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result/original_alignment/codeml,LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C302 690 sites
reading seq# 2 C126 690 sites
reading seq# 3 C440 690 sites
reading seq# 4 C489 690 sites
reading seq# 5 C552 690 sites
reading seq# 6 C506 690 sites
reading seq# 7 C372 690 sites
reading seq# 8 C60 690 sites
reading seq# 9 C505 690 sites
reading seq#10 C274 690 sites
reading seq#11 C31 690 sites
reading seq#12 C65 690 sites
reading seq#13 C71 690 sites
reading seq#14 C124 690 sites
reading seq#15 C103 690 sites
reading seq#16 C144 690 sites
reading seq#17 C168 690 sites
reading seq#18 C117 690 sites
reading seq#19 C247 690 sites
reading seq#20 C130 690 sites
reading seq#21 C660 690 sites
reading seq#22 C180 690 sites
reading seq#23 C624 690 sites
reading seq#24 C298 690 sites
reading seq#25 C562 690 sites
reading seq#26 C363 690 sites
reading seq#27 C547 690 sites
reading seq#28 C310 690 sites
reading seq#29 C648 690 sites
reading seq#30 C337 690 sitesns = 30 ls = 690
Reading sequences, sequential format..
Reading seq # 1: C302
Reading seq # 2: C126
Reading seq # 3: C440
Reading seq # 4: C489
Reading seq # 5: C552
Reading seq # 6: C506
Reading seq # 7: C372
Reading seq # 8: C60
Reading seq # 9: C505
Reading seq #10: C274
Reading seq #11: C31
Reading seq #12: C65
Reading seq #13: C71
Reading seq #14: C124
Reading seq #15: C103
Reading seq #16: C144
Reading seq #17: C168
Reading seq #18: C117
Reading seq #19: C247
Reading seq #20: C130
Reading seq #21: C660
Reading seq #22: C180
Reading seq #23: C624
Reading seq #24: C298
Reading seq #25: C562
Reading seq #26: C363
Reading seq #27: C547
Reading seq #28: C310
Reading seq #29: C648
Reading seq #30: C337
Sites with gaps or missing data are removed.
12 ambiguity characters in seq. 1
12 ambiguity characters in seq. 2
12 ambiguity characters in seq. 3
12 ambiguity characters in seq. 4
12 ambiguity characters in seq. 5
12 ambiguity characters in seq. 6
12 ambiguity characters in seq. 7
12 ambiguity characters in seq. 8
12 ambiguity characters in seq. 9
12 ambiguity characters in seq. 10
12 ambiguity characters in seq. 11
12 ambiguity characters in seq. 12
12 ambiguity characters in seq. 13
12 ambiguity characters in seq. 14
12 ambiguity characters in seq. 15
12 ambiguity characters in seq. 16
12 ambiguity characters in seq. 17
12 ambiguity characters in seq. 18
12 ambiguity characters in seq. 19
12 ambiguity characters in seq. 20
12 ambiguity characters in seq. 21
12 ambiguity characters in seq. 22
12 ambiguity characters in seq. 23
12 ambiguity characters in seq. 24
12 ambiguity characters in seq. 25
12 ambiguity characters in seq. 26
12 ambiguity characters in seq. 27
12 ambiguity characters in seq. 28
12 ambiguity characters in seq. 29
12 ambiguity characters in seq. 30
4 sites are removed. 13 14 15 16
Sequences read..
Counting site patterns.. 0:00
Compressing, 91 patterns at 226 / 226 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 91 patterns at 226 / 226 sites (100.0%), 0:00
Counting codons..
3480 bytes for distance
88816 bytes for conP
8008 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(12, 11, 13, 16, 21, 27, 26, 8, 1, 3, 6, 5, 7, 15, 19, 25, 23, 24, 9, 29, 28, (((17, 18, 2), 20), ((4, 14), 10)), (22, 30)); MP score: 46
310856 bytes for conP, adjusted
0.064083 0.047917 0.069981 0.063313 0.011151 0.014634 0.042970 0.097064 0.061414 0.047213 0.058093 0.059219 0.087990 0.012708 0.065436 0.027565 0.105678 0.015866 0.055492 0.021549 0.075325 0.017183 0.066215 0.108369 0.045978 0.073530 0.089577 0.083977 0.027028 0.099762 0.057332 0.064918 0.057509 0.024767 0.060662 0.101947 0.300000 0.519058 0.501955
ntime & nrate & np: 36 2 39
Bounds (np=39):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 10.385498
np = 39
lnL0 = -1627.192728
Iterating by ming2
Initial: fx= 1627.192728
x= 0.06408 0.04792 0.06998 0.06331 0.01115 0.01463 0.04297 0.09706 0.06141 0.04721 0.05809 0.05922 0.08799 0.01271 0.06544 0.02756 0.10568 0.01587 0.05549 0.02155 0.07532 0.01718 0.06621 0.10837 0.04598 0.07353 0.08958 0.08398 0.02703 0.09976 0.05733 0.06492 0.05751 0.02477 0.06066 0.10195 0.30000 0.51906 0.50195
1 h-m-p 0.0000 0.0001 1067.4106 ++ 1545.666906 m 0.0001 44 | 1/39
2 h-m-p 0.0000 0.0000 21611.9844 ++ 1539.273891 m 0.0000 86 | 2/39
3 h-m-p 0.0000 0.0000 177238.6023 ++ 1511.502056 m 0.0000 128 | 3/39
4 h-m-p 0.0000 0.0000 197920.3756 ++ 1413.660537 m 0.0000 170 | 4/39
5 h-m-p 0.0000 0.0000 12353.6808 ++ 1400.917719 m 0.0000 212 | 5/39
6 h-m-p 0.0000 0.0000 28824.2570 ++ 1361.472261 m 0.0000 254 | 6/39
7 h-m-p 0.0000 0.0000 11209.1157 ++ 1354.475672 m 0.0000 296 | 7/39
8 h-m-p 0.0000 0.0000 32892.2975 ++ 1351.790065 m 0.0000 338 | 8/39
9 h-m-p 0.0000 0.0000 4602.8469 ++ 1348.649111 m 0.0000 380 | 9/39
10 h-m-p 0.0000 0.0000 31637.6150 ++ 1344.672211 m 0.0000 422 | 10/39
11 h-m-p 0.0000 0.0000 30062.6183 ++ 1343.383915 m 0.0000 464 | 11/39
12 h-m-p 0.0000 0.0000 24963.1279 ++ 1338.390534 m 0.0000 506 | 12/39
13 h-m-p 0.0000 0.0000 16867.5126 ++ 1323.387026 m 0.0000 548 | 13/39
14 h-m-p 0.0000 0.0000 5135.1720 ++ 1308.773959 m 0.0000 590 | 14/39
15 h-m-p 0.0000 0.0000 5296.2945 ++ 1303.821697 m 0.0000 632 | 15/39
16 h-m-p 0.0000 0.0000 6833.7784 ++ 1302.637062 m 0.0000 674 | 16/39
17 h-m-p 0.0000 0.0000 1194.1548 ++ 1294.317282 m 0.0000 716 | 17/39
18 h-m-p 0.0000 0.0000 1606.0013 ++ 1293.223662 m 0.0000 758 | 18/39
19 h-m-p 0.0000 0.0004 128.4524 ++YCYYYYYCCC 1289.106396 10 0.0004 815 | 18/39
20 h-m-p 0.0001 0.0007 135.0346 +YYYYCC 1284.281881 5 0.0006 864 | 18/39
21 h-m-p 0.0001 0.0003 140.7303 YCCCC 1283.607290 4 0.0001 913 | 18/39
22 h-m-p 0.0003 0.0071 67.6715 ++CYCCC 1271.617225 4 0.0061 965 | 18/39
23 h-m-p 0.0005 0.0025 53.6810 CCCC 1271.271265 3 0.0004 1013 | 18/39
24 h-m-p 0.0010 0.0155 20.9041 +YCYCCC 1268.287937 5 0.0090 1064 | 18/39
25 h-m-p 0.0008 0.0038 31.3358 +YCYCC 1267.011807 4 0.0024 1113 | 18/39
26 h-m-p 0.0042 0.0211 5.5110 YCCCC 1266.396965 4 0.0101 1162 | 18/39
27 h-m-p 0.0186 0.0928 2.9599 +YYCCC 1263.266568 4 0.0628 1211 | 18/39
28 h-m-p 0.0202 0.1012 0.5003 +YYCCC 1261.381232 4 0.0679 1260 | 18/39
29 h-m-p 0.0079 0.0394 1.4566 +YYCCCC 1260.276496 5 0.0255 1332 | 18/39
30 h-m-p 0.0075 0.0374 1.1811 YCCCC 1259.571364 4 0.0173 1381 | 18/39
31 h-m-p 0.0063 0.0317 1.9209 YCCCC 1259.096714 4 0.0132 1430 | 18/39
32 h-m-p 0.0253 0.1266 0.8653 YCCCC 1257.814065 4 0.0648 1479 | 18/39
33 h-m-p 0.0355 0.1776 0.8579 CCCC 1256.851106 3 0.0612 1548 | 18/39
34 h-m-p 0.0848 0.4241 0.3053 CCC 1256.623180 2 0.0907 1615 | 18/39
35 h-m-p 0.0536 1.5343 0.5164 +CCCC 1255.617065 3 0.2928 1685 | 18/39
36 h-m-p 0.1400 0.7001 0.4189 CC 1255.158482 1 0.1860 1750 | 18/39
37 h-m-p 0.2294 1.1470 0.3137 YCCC 1254.509573 3 0.5644 1818 | 18/39
38 h-m-p 0.0917 0.4587 0.5720 +YCC 1254.011587 2 0.2935 1885 | 18/39
39 h-m-p 0.1244 0.6219 0.2224 ++ 1253.719516 m 0.6219 1948 | 19/39
40 h-m-p 0.4263 2.5670 0.3231 CCCC 1253.445430 3 0.4571 2017 | 19/39
41 h-m-p 1.1160 7.5029 0.1323 CC 1253.279984 1 1.1151 2081 | 18/39
42 h-m-p 0.2759 2.1075 0.5349 -YC 1253.278165 1 0.0118 2145 | 18/39
43 h-m-p 0.0622 5.1865 0.1012 ++YCC 1253.228266 2 0.7244 2213 | 18/39
44 h-m-p 1.0041 8.0000 0.0730 YCC 1253.204234 2 0.6411 2279 | 18/39
45 h-m-p 1.6000 8.0000 0.0199 YC 1253.195149 1 1.2363 2343 | 18/39
46 h-m-p 1.6000 8.0000 0.0063 C 1253.191557 0 1.7054 2406 | 18/39
47 h-m-p 1.6000 8.0000 0.0015 C 1253.190930 0 1.5187 2469 | 18/39
48 h-m-p 1.6000 8.0000 0.0012 YC 1253.190771 1 1.2327 2533 | 18/39
49 h-m-p 1.2607 8.0000 0.0012 C 1253.190711 0 1.4255 2596 | 18/39
50 h-m-p 1.6000 8.0000 0.0003 C 1253.190692 0 2.3114 2659 | 18/39
51 h-m-p 1.6000 8.0000 0.0003 C 1253.190689 0 1.2853 2722 | 18/39
52 h-m-p 1.6000 8.0000 0.0000 C 1253.190689 0 1.3618 2785 | 18/39
53 h-m-p 1.2930 8.0000 0.0000 C 1253.190689 0 1.0752 2848 | 18/39
54 h-m-p 1.6000 8.0000 0.0000 -Y 1253.190689 0 0.1000 2912 | 18/39
55 h-m-p 0.0160 8.0000 0.0001 C 1253.190689 0 0.0059 2975 | 18/39
56 h-m-p 0.0000 0.0006 85.8249 --------.. | 18/39
57 h-m-p 0.0003 0.1730 0.0729 --C 1253.190689 0 0.0000 3088 | 18/39
58 h-m-p 0.0030 1.5002 0.0090 ------------.. | 18/39
59 h-m-p 0.0160 8.0000 0.0190 ------------- | 18/39
60 h-m-p 0.0160 8.0000 0.0190 -------------
Out..
lnL = -1253.190689
3310 lfun, 9930 eigenQcodon, 238320 P(t)
end of tree file.
Time used: 1:27
Model 2: PositiveSelection
TREE # 1
(12, 11, 13, 16, 21, 27, 26, 8, 1, 3, 6, 5, 7, 15, 19, 25, 23, 24, 9, 29, 28, (((17, 18, 2), 20), ((4, 14), 10)), (22, 30)); MP score: 46
0.033400 0.101360 0.079646 0.016660 0.103508 0.014980 0.050453 0.031758 0.092516 0.034727 0.072778 0.040183 0.017588 0.102725 0.027473 0.077528 0.025913 0.022864 0.093894 0.075318 0.066115 0.034769 0.080633 0.034342 0.076354 0.086111 0.090919 0.079922 0.043816 0.014188 0.064872 0.047552 0.065281 0.022731 0.015800 0.022343 2.239557 0.834502 0.124261 0.270914 1.353867
ntime & nrate & np: 36 3 41
Bounds (np=41):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 5.622164
np = 41
lnL0 = -1526.330108
Iterating by ming2
Initial: fx= 1526.330108
x= 0.03340 0.10136 0.07965 0.01666 0.10351 0.01498 0.05045 0.03176 0.09252 0.03473 0.07278 0.04018 0.01759 0.10272 0.02747 0.07753 0.02591 0.02286 0.09389 0.07532 0.06612 0.03477 0.08063 0.03434 0.07635 0.08611 0.09092 0.07992 0.04382 0.01419 0.06487 0.04755 0.06528 0.02273 0.01580 0.02234 2.23956 0.83450 0.12426 0.27091 1.35387
1 h-m-p 0.0000 0.0001 859.1544 ++ 1458.825447 m 0.0001 87 | 1/41
2 h-m-p 0.0000 0.0000 1655777.4199 ++ 1455.138132 m 0.0000 172 | 2/41
3 h-m-p 0.0000 0.0000 11144.7593 ++ 1447.671830 m 0.0000 256 | 3/41
4 h-m-p 0.0000 0.0000 13210.4985 ++ 1429.364947 m 0.0000 339 | 4/41
5 h-m-p 0.0000 0.0000 14762.4459 ++ 1427.621521 m 0.0000 421 | 5/41
6 h-m-p 0.0000 0.0000 22612.1925 ++ 1417.994419 m 0.0000 502 | 6/41
7 h-m-p 0.0000 0.0000 24036.6333 ++ 1396.095983 m 0.0000 582 | 7/41
8 h-m-p 0.0000 0.0000 92458.0347 ++ 1377.527407 m 0.0000 661 | 8/41
9 h-m-p 0.0000 0.0000 24145.6001 ++ 1351.238975 m 0.0000 739 | 9/41
10 h-m-p 0.0000 0.0000 6567.7703 ++ 1318.537596 m 0.0000 816 | 10/41
11 h-m-p 0.0000 0.0000 899.9526 ++ 1302.262419 m 0.0000 892 | 11/41
12 h-m-p 0.0000 0.0000 8833.9529 ++ 1297.458108 m 0.0000 967 | 12/41
13 h-m-p 0.0000 0.0000 1325.0693 ++ 1296.062885 m 0.0000 1041 | 13/41
14 h-m-p 0.0000 0.0000 1971.2198 ++ 1288.694800 m 0.0000 1114 | 14/41
15 h-m-p 0.0000 0.0000 1432.6269 ++ 1281.970877 m 0.0000 1186 | 15/41
16 h-m-p 0.0000 0.0000 2073.1183 ++ 1277.685404 m 0.0000 1257 | 16/41
17 h-m-p 0.0000 0.0000 2067.9890 ++ 1276.592331 m 0.0000 1327 | 17/41
18 h-m-p 0.0000 0.0000 1471.3017 ++ 1276.126672 m 0.0000 1396 | 18/41
19 h-m-p 0.0000 0.0002 264.2481 ++YYYCYCCC 1267.951146 7 0.0001 1476 | 18/41
20 h-m-p 0.0000 0.0002 167.9571 YCYCCC 1266.490034 5 0.0001 1551 | 18/41
21 h-m-p 0.0000 0.0000 520.1144 CCCC 1265.938788 3 0.0000 1624 | 18/41
22 h-m-p 0.0000 0.0001 131.5196 CYCCC 1265.604814 4 0.0000 1698 | 18/41
23 h-m-p 0.0001 0.0016 39.4866 +YYCYCCCC 1263.644687 7 0.0007 1777 | 18/41
24 h-m-p 0.0001 0.0004 125.1604 CCCCC 1262.958934 4 0.0001 1852 | 18/41
25 h-m-p 0.0001 0.0007 70.5504 YCCCCC 1261.878235 5 0.0003 1928 | 18/41
26 h-m-p 0.0003 0.0015 42.6719 YCYCCC 1260.540784 5 0.0007 2003 | 18/41
27 h-m-p 0.0033 0.0186 8.8671 CCCC 1260.153545 3 0.0049 2076 | 18/41
28 h-m-p 0.0015 0.0075 27.7971 YCCCC 1259.424504 4 0.0032 2150 | 18/41
29 h-m-p 0.0009 0.0044 34.7438 +CCC 1258.851701 2 0.0032 2222 | 18/41
30 h-m-p 0.0003 0.0017 25.2961 ++ 1258.500706 m 0.0017 2289 | 19/41
31 h-m-p 0.0038 0.0453 9.6579 +CYC 1257.942108 2 0.0167 2360 | 19/41
32 h-m-p 0.0039 0.0193 15.8560 +CC 1257.267495 1 0.0147 2429 | 19/41
33 h-m-p 0.0220 0.1102 0.4578 ++ 1256.957712 m 0.1102 2495 | 18/41
34 h-m-p -0.0000 -0.0000 2.3017
h-m-p: -0.00000000e+00 -0.00000000e+00 2.30168895e+00 1256.957712
.. | 19/41
35 h-m-p 0.0000 0.0000 1944800.4308 ----YCYYYCCCCC 1253.546110 9 0.0000 2643 | 19/41
36 h-m-p 0.0000 0.0001 134.7034 CCCC 1253.284199 3 0.0000 2715 | 19/41
37 h-m-p 0.0001 0.0003 48.2768 YCC 1253.247232 2 0.0000 2784 | 19/41
38 h-m-p 0.0000 0.0012 34.3115 CYC 1253.226290 2 0.0001 2853 | 19/41
39 h-m-p 0.0001 0.0012 19.2514 YC 1253.219166 1 0.0001 2920 | 19/41
40 h-m-p 0.0002 0.0015 4.9473 YC 1253.218813 1 0.0000 2987 | 18/41
41 h-m-p 0.0000 0.0084 3.6757 YC 1253.218212 1 0.0001 3054 | 18/41
42 h-m-p 0.0001 0.0308 6.0186 +YC 1253.215048 1 0.0004 3123 | 18/41
43 h-m-p 0.0001 0.0049 23.1621 YC 1253.209832 1 0.0002 3191 | 18/41
44 h-m-p 0.0001 0.0025 52.0860 CC 1253.205801 1 0.0001 3260 | 18/41
45 h-m-p 0.0001 0.0031 67.2733 CC 1253.199487 1 0.0001 3329 | 18/41
46 h-m-p 0.0004 0.0090 12.4447 CC 1253.197416 1 0.0002 3398 | 18/41
47 h-m-p 0.0002 0.0049 7.9665 YC 1253.197128 1 0.0000 3466 | 18/41
48 h-m-p 0.0001 0.0063 2.7297 C 1253.197064 0 0.0000 3533 | 18/41
49 h-m-p 0.0001 0.0617 0.9078 C 1253.197015 0 0.0002 3600 | 18/41
50 h-m-p 0.0005 0.2428 0.9304 +YC 1253.196726 1 0.0013 3669 | 18/41
51 h-m-p 0.0001 0.0036 23.9592 CC 1253.196305 1 0.0001 3738 | 18/41
52 h-m-p 0.0000 0.0128 46.1143 +++++ 1253.055988 m 0.0128 3808 | 19/41
53 h-m-p 0.0003 0.0013 94.8085 -CC 1253.055532 1 0.0000 3878 | 19/41
54 h-m-p 0.0034 0.2887 0.5857 YC 1253.055358 1 0.0018 3945 | 18/41
55 h-m-p 0.0004 0.2178 50.0515 ++CYC 1252.990287 2 0.0064 4016 | 18/41
56 h-m-p 0.0035 0.0799 91.3809 +YCCC 1252.642128 3 0.0104 4089 | 18/41
57 h-m-p 0.6848 5.4012 1.3938 YCCC 1252.506676 3 0.4261 4161 | 18/41
58 h-m-p 0.8431 8.0000 0.7044 YCCC 1252.107747 3 1.7794 4233 | 18/41
59 h-m-p 1.3397 8.0000 0.9356 CCC 1251.851268 2 1.9359 4304 | 18/41
60 h-m-p 1.6000 8.0000 0.3885 CCC 1251.805914 2 1.3734 4375 | 18/41
61 h-m-p 1.0924 8.0000 0.4884 CC 1251.800490 1 0.4195 4444 | 18/41
62 h-m-p 1.1188 8.0000 0.1831 YC 1251.786271 1 2.4767 4512 | 18/41
63 h-m-p 1.6000 8.0000 0.1539 C 1251.781905 0 1.6000 4579 | 18/41
64 h-m-p 1.6000 8.0000 0.0144 C 1251.781792 0 1.5577 4646 | 18/41
65 h-m-p 1.6000 8.0000 0.0080 ++ 1251.781312 m 8.0000 4713 | 18/41
66 h-m-p 0.3306 8.0000 0.1930 +YC 1251.779247 1 2.7936 4782 | 18/41
67 h-m-p 1.6000 8.0000 0.1890 +YC 1251.774733 1 5.1538 4851 | 18/41
68 h-m-p 1.6000 8.0000 0.3909 CC 1251.773499 1 2.0472 4920 | 18/41
69 h-m-p 1.6000 8.0000 0.3231 YC 1251.772861 1 3.0150 4988 | 18/41
70 h-m-p 1.6000 8.0000 0.4101 C 1251.772624 0 2.0261 5055 | 18/41
71 h-m-p 1.6000 8.0000 0.3249 YC 1251.772520 1 2.9028 5123 | 18/41
72 h-m-p 1.6000 8.0000 0.3962 C 1251.772476 0 2.4749 5190 | 18/41
73 h-m-p 1.6000 8.0000 0.3507 Y 1251.772458 0 2.6116 5257 | 18/41
74 h-m-p 1.6000 8.0000 0.4260 Y 1251.772449 0 3.0710 5324 | 18/41
75 h-m-p 1.6000 8.0000 0.5331 Y 1251.772443 0 2.9611 5391 | 18/41
76 h-m-p 1.5360 8.0000 1.0277 ++ 1251.772431 m 8.0000 5458 | 18/41
77 h-m-p 1.4759 8.0000 5.5709 +Y 1251.772406 0 4.0486 5526 | 18/41
78 h-m-p 1.6000 8.0000 3.0862 Y 1251.772405 0 1.2540 5593 | 18/41
79 h-m-p 1.6000 8.0000 0.2306 --Y 1251.772405 0 0.0250 5662 | 18/41
80 h-m-p 0.0160 8.0000 0.5134 C 1251.772405 0 0.0040 5729 | 18/41
81 h-m-p 0.0160 8.0000 1.0852 ----C 1251.772405 0 0.0000 5800 | 18/41
82 h-m-p 0.0160 8.0000 0.8603 -------------.. | 18/41
83 h-m-p 0.0057 2.8611 0.0154 ------------
Out..
lnL = -1251.772405
5956 lfun, 23824 eigenQcodon, 643248 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -1257.477543 S = -1196.501338 -76.901149
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 91 patterns 5:54
did 20 / 91 patterns 5:54
did 30 / 91 patterns 5:54
did 40 / 91 patterns 5:54
did 50 / 91 patterns 5:54
did 60 / 91 patterns 5:54
did 70 / 91 patterns 5:54
did 80 / 91 patterns 5:54
did 90 / 91 patterns 5:54
did 91 / 91 patterns 5:54end of tree file.
Time used: 5:55
Model 7: beta
TREE # 1
(12, 11, 13, 16, 21, 27, 26, 8, 1, 3, 6, 5, 7, 15, 19, 25, 23, 24, 9, 29, 28, (((17, 18, 2), 20), ((4, 14), 10)), (22, 30)); MP score: 46
0.088719 0.018091 0.056344 0.057788 0.011090 0.012482 0.050548 0.038850 0.081916 0.047591 0.086801 0.048443 0.020139 0.109452 0.033444 0.085399 0.052748 0.073343 0.037199 0.027333 0.014107 0.053343 0.099009 0.102998 0.083866 0.034601 0.081436 0.105948 0.068132 0.049254 0.039777 0.047956 0.103591 0.031942 0.044108 0.025604 2.311164 0.492585 1.558474
ntime & nrate & np: 36 1 39
Bounds (np=39):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 9.714372
np = 39
lnL0 = -1552.467989
Iterating by ming2
Initial: fx= 1552.467989
x= 0.08872 0.01809 0.05634 0.05779 0.01109 0.01248 0.05055 0.03885 0.08192 0.04759 0.08680 0.04844 0.02014 0.10945 0.03344 0.08540 0.05275 0.07334 0.03720 0.02733 0.01411 0.05334 0.09901 0.10300 0.08387 0.03460 0.08144 0.10595 0.06813 0.04925 0.03978 0.04796 0.10359 0.03194 0.04411 0.02560 2.31116 0.49259 1.55847
1 h-m-p 0.0000 0.0001 951.8117 ++ 1491.135101 m 0.0001 83 | 1/39
2 h-m-p 0.0000 0.0000 48700.2688 ++ 1455.419188 m 0.0000 164 | 2/39
3 h-m-p 0.0000 0.0000 1278655.0357 ++ 1430.344197 m 0.0000 244 | 3/39
4 h-m-p 0.0000 0.0000 2340.8890 ++ 1421.970598 m 0.0000 323 | 4/39
5 h-m-p 0.0000 0.0000 1640.8826 +CCYYYYC 1394.061622 6 0.0000 410 | 4/39
6 h-m-p 0.0000 0.0000 2987.4644 ++ 1388.603711 m 0.0000 487 | 5/39
7 h-m-p 0.0000 0.0000 1517.3480 ++ 1380.119721 m 0.0000 564 | 6/39
8 h-m-p 0.0000 0.0000 6023.5327 +YYYYCCCCC 1375.793418 8 0.0000 653 | 6/39
9 h-m-p 0.0000 0.0000 7426.7897 ++ 1373.349059 m 0.0000 728 | 7/39
10 h-m-p 0.0000 0.0000 9512.2073 +YYCYYCCC 1363.687751 7 0.0000 815 | 7/39
11 h-m-p 0.0000 0.0000 2020.1875 ++ 1360.220984 m 0.0000 889 | 8/39
12 h-m-p 0.0000 0.0000 8687.3663 ++ 1351.011786 m 0.0000 963 | 9/39
13 h-m-p 0.0000 0.0000 7471.8173 ++ 1345.298587 m 0.0000 1036 | 10/39
14 h-m-p 0.0000 0.0000 33540.5619 ++ 1339.864474 m 0.0000 1108 | 11/39
15 h-m-p 0.0000 0.0000 4171.5357 +CCYYYCCCCC 1321.215693 9 0.0000 1195 | 11/39
16 h-m-p 0.0000 0.0000 4031.4801 ++ 1302.504585 m 0.0000 1265 | 12/39
17 h-m-p 0.0000 0.0000 1582.2348 ++ 1290.842837 m 0.0000 1335 | 13/39
18 h-m-p 0.0000 0.0000 2247.4481 ++ 1290.426616 m 0.0000 1404 | 14/39
19 h-m-p 0.0000 0.0000 1804.0370 ++ 1288.112116 m 0.0000 1472 | 15/39
20 h-m-p 0.0000 0.0000 1050.5191 ++ 1285.918550 m 0.0000 1539 | 16/39
21 h-m-p 0.0000 0.0000 4235.3351 ++ 1284.975337 m 0.0000 1605 | 17/39
22 h-m-p 0.0000 0.0000 654.4274 ++ 1278.777708 m 0.0000 1670 | 18/39
23 h-m-p 0.0001 0.0003 88.2797 +YYYCCC 1277.317825 5 0.0002 1742 | 18/39
24 h-m-p 0.0041 0.0206 4.1057 +YYCCCC 1266.194086 5 0.0187 1815 | 18/39
25 h-m-p 0.0010 0.0050 5.1727 +YYCYC 1264.687333 4 0.0034 1884 | 18/39
26 h-m-p 0.0032 0.0278 5.4415 +YYCCCCC 1263.049555 6 0.0141 1958 | 18/39
27 h-m-p 0.0113 0.0566 5.3592 CCC 1262.102115 2 0.0123 2025 | 18/39
28 h-m-p 0.0300 0.1498 0.5327 +YYCCCC 1261.064536 5 0.0913 2097 | 18/39
29 h-m-p 0.0292 0.1664 1.6626 +YYCCC 1259.098127 4 0.0979 2167 | 18/39
30 h-m-p 0.0735 0.3676 1.3696 CCC 1258.081972 2 0.1110 2234 | 18/39
31 h-m-p 0.2047 1.0233 0.6541 CYCC 1256.846512 3 0.2864 2302 | 18/39
32 h-m-p 0.0544 0.2719 2.0608 CYCCCC 1256.243684 5 0.0792 2374 | 18/39
33 h-m-p 0.1101 0.7364 1.4830 YCCC 1255.028848 3 0.2219 2442 | 18/39
34 h-m-p 0.2356 1.1778 0.7167 +YYYYYYCYC 1254.008899 8 0.9739 2515 | 18/39
35 h-m-p 0.0123 0.0614 2.0872 YCYCCC 1253.944019 5 0.0215 2586 | 18/39
36 h-m-p 0.0077 0.0386 2.8926 +YYYYYYCYYC 1253.798847 10 0.0377 2663 | 18/39
37 h-m-p 0.2220 1.1100 0.3376 CCY 1253.664441 2 0.1968 2730 | 18/39
38 h-m-p 0.0841 0.4203 0.1424 YCYC 1253.591988 3 0.1595 2797 | 18/39
39 h-m-p 0.1132 3.5949 0.2008 YYC 1253.547376 2 0.1460 2862 | 18/39
40 h-m-p 0.2564 6.9167 0.1143 +YC 1253.451325 1 0.7688 2927 | 18/39
41 h-m-p 1.0583 8.0000 0.0830 CC 1253.375589 1 1.6386 2992 | 18/39
42 h-m-p 1.6000 8.0000 0.0787 YC 1253.306718 1 1.1240 3056 | 18/39
43 h-m-p 1.6000 8.0000 0.0276 YC 1253.263492 1 1.1780 3120 | 18/39
44 h-m-p 0.6224 8.0000 0.0522 YC 1253.238043 1 1.2164 3184 | 18/39
45 h-m-p 1.5983 8.0000 0.0397 YC 1253.230984 1 1.0141 3248 | 18/39
46 h-m-p 1.6000 8.0000 0.0094 CC 1253.224356 1 2.0928 3313 | 18/39
47 h-m-p 1.6000 8.0000 0.0024 YC 1253.217302 1 2.8548 3377 | 18/39
48 h-m-p 1.6000 8.0000 0.0015 YC 1253.213201 1 2.9179 3441 | 18/39
49 h-m-p 1.4274 8.0000 0.0031 CC 1253.212009 1 2.2705 3506 | 18/39
50 h-m-p 1.6000 8.0000 0.0021 YC 1253.211136 1 3.8897 3570 | 18/39
51 h-m-p 1.6000 8.0000 0.0023 YC 1253.209984 1 3.6276 3634 | 18/39
52 h-m-p 1.6000 8.0000 0.0022 CY 1253.209448 1 2.0372 3699 | 18/39
53 h-m-p 1.0777 6.4925 0.0042 C 1253.209351 0 0.3483 3762 | 18/39
54 h-m-p 0.4847 8.0000 0.0030 C 1253.209301 0 0.5491 3825 | 18/39
55 h-m-p 0.4507 6.1672 0.0037 Y 1253.209287 0 0.3112 3888 | 18/39
56 h-m-p 0.1136 2.1285 0.0101 Y 1253.209286 0 0.0530 3951 | 18/39
57 h-m-p 0.0082 0.3214 0.0650 C 1253.209286 0 0.0029 4014 | 18/39
58 h-m-p 0.0014 0.1515 0.1372 ----------C 1253.209286 0 0.0000 4087 | 18/39
59 h-m-p 0.0018 0.9005 0.0330 +Y 1253.209285 0 0.0140 4151 | 18/39
60 h-m-p 0.0226 1.4372 0.0205 -----C 1253.209285 0 0.0000 4219 | 18/39
61 h-m-p 0.0160 8.0000 0.0003 +++Y 1253.209255 0 0.7536 4285 | 18/39
62 h-m-p 0.8028 8.0000 0.0003 +C 1253.209210 0 3.2807 4349 | 18/39
63 h-m-p 1.6000 8.0000 0.0000 Y 1253.209203 0 0.9452 4412 | 18/39
64 h-m-p 0.1556 8.0000 0.0003 ++C 1253.209193 0 3.1159 4477 | 18/39
65 h-m-p 0.7465 8.0000 0.0010 -Y 1253.209193 0 0.0898 4541 | 18/39
66 h-m-p 0.0997 8.0000 0.0009 C 1253.209193 0 0.1339 4604 | 18/39
67 h-m-p 0.1632 8.0000 0.0008 C 1253.209193 0 0.1826 4667 | 18/39
68 h-m-p 0.2825 8.0000 0.0005 C 1253.209192 0 0.2902 4730 | 18/39
69 h-m-p 1.0847 8.0000 0.0001 Y 1253.209189 0 0.6054 4793 | 18/39
70 h-m-p 0.3650 8.0000 0.0002 +Y 1253.209176 0 3.5342 4857 | 18/39
71 h-m-p 1.3651 8.0000 0.0006 -C 1253.209176 0 0.1304 4921 | 18/39
72 h-m-p 0.1866 8.0000 0.0004 Y 1253.209176 0 0.1346 4984 | 18/39
73 h-m-p 0.2240 8.0000 0.0002 Y 1253.209176 0 0.1776 5047 | 18/39
74 h-m-p 0.3797 8.0000 0.0001 Y 1253.209176 0 0.2486 5110 | 18/39
75 h-m-p 1.4412 8.0000 0.0000 C 1253.209176 0 0.4884 5173 | 18/39
76 h-m-p 0.3080 8.0000 0.0000 +++ 1253.209173 m 8.0000 5237 | 18/39
77 h-m-p 0.4560 8.0000 0.0005 -----Y 1253.209173 0 0.0001 5305 | 18/39
78 h-m-p 0.0160 8.0000 0.0007 ---C 1253.209173 0 0.0001 5371 | 18/39
79 h-m-p 0.0056 2.7751 0.0110 C 1253.209173 0 0.0049 5434 | 18/39
80 h-m-p 0.1223 8.0000 0.0004 C 1253.209173 0 0.1853 5497 | 18/39
81 h-m-p 0.2329 8.0000 0.0004 C 1253.209173 0 0.2329 5560 | 18/39
82 h-m-p 0.3301 8.0000 0.0002 C 1253.209172 0 0.3158 5623 | 18/39
83 h-m-p 0.5981 8.0000 0.0001 C 1253.209171 0 0.5525 5686 | 18/39
84 h-m-p 1.6000 8.0000 0.0000 C 1253.209168 0 1.5349 5749 | 18/39
85 h-m-p 0.1693 8.0000 0.0001 +++ 1253.209132 m 8.0000 5813 | 18/39
86 h-m-p 1.6000 8.0000 0.0000 C 1253.209131 0 1.6828 5876 | 18/39
87 h-m-p 1.0382 8.0000 0.0001 --Y 1253.209131 0 0.0162 5941 | 18/39
88 h-m-p 0.0675 8.0000 0.0000 ++Y 1253.209130 0 0.8419 6006 | 18/39
89 h-m-p 0.2840 8.0000 0.0001 ----C 1253.209130 0 0.0003 6073
Out..
lnL = -1253.209130
6074 lfun, 66814 eigenQcodon, 2186640 P(t)
end of tree file.
Time used: 17:47
Model 8: beta&w>1
TREE # 1
(12, 11, 13, 16, 21, 27, 26, 8, 1, 3, 6, 5, 7, 15, 19, 25, 23, 24, 9, 29, 28, (((17, 18, 2), 20), ((4, 14), 10)), (22, 30)); MP score: 46
0.034430 0.048501 0.025567 0.105195 0.026102 0.052560 0.015454 0.035161 0.057765 0.096769 0.057157 0.105118 0.048926 0.016892 0.033389 0.046159 0.109402 0.084550 0.076592 0.058834 0.017801 0.095101 0.064954 0.032040 0.061243 0.082776 0.078869 0.029003 0.103490 0.036487 0.072540 0.051285 0.023686 0.064768 0.090400 0.066757 2.239352 0.900000 0.528892 1.232640 1.300000
ntime & nrate & np: 36 2 41
Bounds (np=41):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 7.828757
np = 41
lnL0 = -1551.550940
Iterating by ming2
Initial: fx= 1551.550940
x= 0.03443 0.04850 0.02557 0.10519 0.02610 0.05256 0.01545 0.03516 0.05777 0.09677 0.05716 0.10512 0.04893 0.01689 0.03339 0.04616 0.10940 0.08455 0.07659 0.05883 0.01780 0.09510 0.06495 0.03204 0.06124 0.08278 0.07887 0.02900 0.10349 0.03649 0.07254 0.05129 0.02369 0.06477 0.09040 0.06676 2.23935 0.90000 0.52889 1.23264 1.30000
1 h-m-p 0.0000 0.0001 857.8647 ++ 1482.596240 m 0.0001 87 | 1/41
2 h-m-p 0.0000 0.0000 10597.2548 ++ 1427.444541 m 0.0000 172 | 2/41
3 h-m-p 0.0000 0.0000 171971.7265 ++ 1406.944125 m 0.0000 256 | 3/41
4 h-m-p 0.0000 0.0000 2830.1062 ++ 1373.284504 m 0.0000 339 | 3/41
5 h-m-p 0.0000 0.0000 36264.7538 +YCYYYYYYC 1365.490189 8 0.0000 431 | 3/41
6 h-m-p 0.0000 0.0000 9798.4387 ++ 1362.475685 m 0.0000 513 | 4/41
7 h-m-p 0.0000 0.0000 6902.6420 ++ 1350.615037 m 0.0000 595 | 5/41
8 h-m-p 0.0000 0.0000 43814.7535 ++ 1336.334736 m 0.0000 676 | 6/41
9 h-m-p 0.0000 0.0000 11499.2996 ++ 1334.561576 m 0.0000 756 | 7/41
10 h-m-p 0.0000 0.0000 61754.7434 ++ 1331.631660 m 0.0000 835 | 8/41
11 h-m-p 0.0000 0.0000 44942.3566 ++ 1326.031429 m 0.0000 913 | 9/41
12 h-m-p 0.0000 0.0000 16687.6208 ++ 1312.707868 m 0.0000 990 | 10/41
13 h-m-p 0.0000 0.0000 57565.9373 ++ 1302.461265 m 0.0000 1066 | 11/41
14 h-m-p 0.0000 0.0000 42660.8613 ++ 1295.281166 m 0.0000 1141 | 12/41
15 h-m-p 0.0000 0.0000 3423.1935 ++ 1292.345648 m 0.0000 1215 | 13/41
16 h-m-p 0.0000 0.0000 10550.2376 ++ 1287.930564 m 0.0000 1288 | 14/41
17 h-m-p 0.0000 0.0000 1699.5464 ++ 1285.908455 m 0.0000 1360 | 15/41
18 h-m-p 0.0000 0.0000 1562.0506 ++ 1279.970292 m 0.0000 1431 | 16/41
19 h-m-p 0.0000 0.0000 1334.8964 ++ 1273.027347 m 0.0000 1501 | 17/41
20 h-m-p 0.0000 0.0000 898.3203 ++ 1271.954787 m 0.0000 1570 | 18/41
21 h-m-p 0.0000 0.0003 103.2725 +CYYYCC 1268.625063 5 0.0003 1647 | 18/41
22 h-m-p 0.0000 0.0001 142.5580 +YYCYC 1267.515531 4 0.0001 1720 | 18/41
23 h-m-p 0.0001 0.0004 106.0177 CYCCC 1267.058826 4 0.0001 1794 | 18/41
24 h-m-p 0.0009 0.0045 8.8111 YC 1267.051968 1 0.0002 1862 | 18/41
25 h-m-p 0.0000 0.0018 35.6871 +YC 1267.028439 1 0.0001 1931 | 18/41
26 h-m-p 0.0005 0.0240 8.6935 ++YCYCCCC 1265.375285 6 0.0111 2010 | 18/41
27 h-m-p 0.0021 0.0104 14.0050 +YYCCCC 1264.346109 5 0.0065 2086 | 18/41
28 h-m-p 0.0029 0.0145 18.0103 CYCCC 1263.756361 4 0.0055 2160 | 18/41
29 h-m-p 0.0012 0.0061 35.9118 YCCCC 1263.140561 4 0.0030 2234 | 18/41
30 h-m-p 0.0026 0.0128 9.5004 CCC 1263.100346 2 0.0036 2305 | 18/41
31 h-m-p 0.0061 0.0453 5.6406 ------------.. | 18/41
32 h-m-p 0.0000 0.0000 1952049.7040 ----YYCCYCCC 1257.838073 7 0.0000 2465 | 18/41
33 h-m-p 0.0000 0.0001 1449.2380 CYCCC 1254.387495 4 0.0000 2539 | 18/41
34 h-m-p 0.0000 0.0001 251.8967 YCCC 1253.380628 3 0.0000 2611 | 18/41
35 h-m-p 0.0000 0.0002 70.5302 CCCC 1253.281020 3 0.0000 2684 | 18/41
36 h-m-p 0.0000 0.0006 62.7901 YCC 1253.173072 2 0.0001 2754 | 18/41
37 h-m-p 0.0002 0.0013 32.4038 CCC 1253.160738 2 0.0000 2825 | 18/41
38 h-m-p 0.0001 0.0023 18.7514 CC 1253.151140 1 0.0001 2894 | 18/41
39 h-m-p 0.0001 0.0023 18.0076 CC 1253.141982 1 0.0001 2963 | 18/41
40 h-m-p 0.0000 0.0015 47.8497 YC 1253.122395 1 0.0001 3031 | 18/41
41 h-m-p 0.0001 0.0048 62.9712 YC 1253.083400 1 0.0002 3099 | 18/41
42 h-m-p 0.0001 0.0005 94.2911 YCC 1253.064279 2 0.0001 3169 | 18/41
43 h-m-p 0.0001 0.0016 35.0873 YC 1253.055364 1 0.0001 3237 | 18/41
44 h-m-p 0.0002 0.0012 16.9759 C 1253.053387 0 0.0000 3304 | 18/41
45 h-m-p 0.0001 0.0046 6.5011 CC 1253.052983 1 0.0000 3373 | 18/41
46 h-m-p 0.0002 0.0187 1.1680 C 1253.052938 0 0.0001 3440 | 18/41
47 h-m-p 0.0001 0.0178 1.6015 C 1253.052889 0 0.0001 3507 | 18/41
48 h-m-p 0.0001 0.0417 2.0576 +C 1253.052627 0 0.0004 3575 | 18/41
49 h-m-p 0.0001 0.0069 14.8342 CC 1253.052247 1 0.0001 3644 | 18/41
50 h-m-p 0.0000 0.0160 27.9433 +++CYCCC 1253.000500 4 0.0048 3721 | 18/41
51 h-m-p 0.0014 0.0071 44.9409 -CC 1252.998565 1 0.0001 3791 | 18/41
52 h-m-p 0.0067 0.7983 0.8753 ++YCYC 1252.924257 3 0.2735 3864 | 18/41
53 h-m-p 0.6172 6.2543 0.3879 +YCYC 1252.696749 3 1.5805 3936 | 18/41
54 h-m-p 0.1841 0.9205 0.8639 CYCCC 1252.593252 4 0.3761 4010 | 18/41
55 h-m-p 1.1566 6.1639 0.2809 CYC 1252.534384 2 1.0853 4080 | 18/41
56 h-m-p 1.1591 8.0000 0.2630 CCC 1252.458738 2 1.7083 4151 | 18/41
57 h-m-p 0.2693 1.3466 0.7402 YCCCC 1252.431643 4 0.3227 4225 | 18/41
58 h-m-p 0.2921 4.4255 0.8176 +YCCCC 1252.296417 4 1.2626 4300 | 18/41
59 h-m-p 1.6000 8.0000 0.5250 CYC 1252.157071 2 1.6696 4370 | 18/41
60 h-m-p 0.2610 1.3049 1.3769 YCCCC 1252.124879 4 0.2990 4444 | 18/41
61 h-m-p 0.3475 8.0000 1.1848 CYC 1252.091961 2 0.4317 4514 | 18/41
62 h-m-p 1.2757 8.0000 0.4009 CYC 1252.061477 2 1.4004 4584 | 18/41
63 h-m-p 1.6000 8.0000 0.2278 YC 1252.036992 1 2.8586 4652 | 18/41
64 h-m-p 1.6000 8.0000 0.1735 CCC 1252.027125 2 1.8391 4723 | 18/41
65 h-m-p 1.6000 8.0000 0.1716 YC 1252.016687 1 0.9519 4791 | 18/41
66 h-m-p 0.8117 8.0000 0.2012 ++ 1251.950721 m 8.0000 4858 | 18/41
67 h-m-p 1.6000 8.0000 0.4377 CYC 1251.898963 2 2.0428 4928 | 18/41
68 h-m-p 1.4042 8.0000 0.6368 YC 1251.863605 1 3.3562 4996 | 18/41
69 h-m-p 1.6000 8.0000 0.9328 YC 1251.838041 1 2.5340 5064 | 18/41
70 h-m-p 1.6000 8.0000 1.4072 YCC 1251.820712 2 2.4872 5134 | 18/41
71 h-m-p 1.6000 8.0000 1.9147 YC 1251.807480 1 2.6804 5202 | 18/41
72 h-m-p 1.6000 8.0000 2.7531 YCC 1251.797820 2 2.7498 5272 | 18/41
73 h-m-p 1.6000 8.0000 3.8082 YC 1251.790779 1 3.2668 5340 | 18/41
74 h-m-p 1.6000 8.0000 5.5005 YC 1251.786177 1 2.8449 5408 | 18/41
75 h-m-p 1.3136 6.5680 7.9672 +YC 1251.782815 1 3.4955 5477 | 18/41
76 h-m-p 0.3988 1.9940 12.2763 ++ 1251.780744 m 1.9940 5544 | 19/41
77 h-m-p 0.3811 3.1166 20.8483 -------------Y 1251.780744 0 0.0000 5624 | 19/41
78 h-m-p 0.0160 8.0000 0.5165 ++YC 1251.779891 1 0.6190 5693 | 19/41
79 h-m-p 1.6000 8.0000 0.0636 Y 1251.779839 0 0.6521 5759 | 19/41
80 h-m-p 1.2592 8.0000 0.0329 Y 1251.779824 0 0.6206 5825 | 19/41
81 h-m-p 1.6000 8.0000 0.0004 ----Y 1251.779824 0 0.0016 5895
Out..
lnL = -1251.779824
5896 lfun, 70752 eigenQcodon, 2334816 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -1256.965053 S = -1196.473074 -98.089477
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 91 patterns 30:16
did 20 / 91 patterns 30:16
did 30 / 91 patterns 30:17
did 40 / 91 patterns 30:17
did 50 / 91 patterns 30:17
did 60 / 91 patterns 30:17
did 70 / 91 patterns 30:18
did 80 / 91 patterns 30:18
did 90 / 91 patterns 30:18
did 91 / 91 patterns 30:18end of tree file.
Time used: 30:18
The loglikelihoods for models M1, M2, M7 and M8 are -1253.190689 -1251.772405 -1253.209130 -1251.779824 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
ON_018_M_AIP84470_1_2014_02_04_Canada_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
GDS12_M_QCQ19951_1_2011_02_10_China_Swine_PEDV MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
PEDV_YZ_NA_QED40662_1_2016_09_China_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
UNKNOWN_MT843279_NA_QMU85410_1_2013_02_China_Unknown_PEDV MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYGVKMAILWILWPLVL
USA_Michigan189_2014_NA_AKJ21992_1_2014_02_17_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
USA_Illinois201_2014_NA_AKJ21920_1_2014_03_07_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
PEDV_GER_L01011_K01_15_01_2015_M_SNQ27970_1_NA_NA_Unknown_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
CH_JX_1_2013_NA_AHF20048_1_2013_03_China_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
USA_Illinois194_2014_NA_AKJ22040_1_2014_03_03_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
LZC_M_ABM64779_1_NA_China_Unknown_PEDV MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYGVKMAILWILWPLVL
CAN_Quebec334_2014_NA_AKJ22136_1_2014_05_14_Canada_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
CH_SCCD_2014_M_AMR60836_1_2014_11_China_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
CH_SCZY44_2017_M_AZL47207_1_2017_09_09_China_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYGVKMAILWILWPLVL
GDS09_M_QCQ20077_1_2014_08_01_China_Swine_PEDV MSNGFIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYGVKMAILWILWPLVL
COL_ValledelCauca05761_2015_NA_QGQ60267_1_2015_05_08_Colombia_Swine_PEDV MSNDSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
GDS29_M_QCQ19891_1_2014_07_11_China_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
GD_1_M_AFW99001_1_2011_12_China_Swine_PEDV MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
GDS01_M_AKE53208_1_2012_11_10_China_Swine_PEDV MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
KNU_1704_M_AWM11471_1_2017_11_South_Korea_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
GDS16_M_QCQ19945_1_2011_05_25_China_Swine_PEDV MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
WHZHC72223_NA_APG77339_1_2014_China_Nematode_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYGVKMAILWILWPLVL
GER_L03209_2019_NA_CAC9433378_1_NA_NA_Unknown_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
USA_NorthCarolina91_2013_NA_AID56958_1_2013_12_08_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
OH9097_14_M_ALM31947_1_2014_10_19_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
USA_Minnesota212_2014_NA_AKJ21908_1_2014_02_13_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
PEDV_GER_L00926_K20_4_01_2014_M_SNQ27896_1_NA_NA_Unknown_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
USA_Kansas432_2014_NA_AKJ21752_1_2014_10_31_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
PC22A_P160_NA_APX42140_1_2015_10_01_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
USA_Tennesse56_2013_NA_AID56784_1_2013_11_04_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
PEDV_1931_1_Valladolid_Molpeceres_M_QKV43802_1_2017_01_19_Spain_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVL
***. *******:****************************.******************
ON_018_M_AIP84470_1_2014_02_04_Canada_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
GDS12_M_QCQ19951_1_2011_02_10_China_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
PEDV_YZ_NA_QED40662_1_2016_09_China_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
UNKNOWN_MT843279_NA_QMU85410_1_2013_02_China_Unknown_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
USA_Michigan189_2014_NA_AKJ21992_1_2014_02_17_USA_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
USA_Illinois201_2014_NA_AKJ21920_1_2014_03_07_USA_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
PEDV_GER_L01011_K01_15_01_2015_M_SNQ27970_1_NA_NA_Unknown_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
CH_JX_1_2013_NA_AHF20048_1_2013_03_China_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
USA_Illinois194_2014_NA_AKJ22040_1_2014_03_03_USA_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
LZC_M_ABM64779_1_NA_China_Unknown_PEDV ALSLFDASPSFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
CAN_Quebec334_2014_NA_AKJ22136_1_2014_05_14_Canada_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
CH_SCCD_2014_M_AMR60836_1_2014_11_China_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
CH_SCZY44_2017_M_AZL47207_1_2017_09_09_China_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
GDS09_M_QCQ20077_1_2014_08_01_China_Swine_PEDV ALSLFNAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
COL_ValledelCauca05761_2015_NA_QGQ60267_1_2015_05_08_Colombia_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
GDS29_M_QCQ19891_1_2014_07_11_China_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
GD_1_M_AFW99001_1_2011_12_China_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
GDS01_M_AKE53208_1_2012_11_10_China_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
KNU_1704_M_AWM11471_1_2017_11_South_Korea_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
GDS16_M_QCQ19945_1_2011_05_25_China_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
WHZHC72223_NA_APG77339_1_2014_China_Nematode_PEDV ALSLFDAWASFQVNWVFFSFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
GER_L03209_2019_NA_CAC9433378_1_NA_NA_Unknown_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
USA_NorthCarolina91_2013_NA_AID56958_1_2013_12_08_USA_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
OH9097_14_M_ALM31947_1_2014_10_19_USA_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
USA_Minnesota212_2014_NA_AKJ21908_1_2014_02_13_USA_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
PEDV_GER_L00926_K20_4_01_2014_M_SNQ27896_1_NA_NA_Unknown_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
USA_Kansas432_2014_NA_AKJ21752_1_2014_10_31_USA_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
PC22A_P160_NA_APX42140_1_2015_10_01_USA_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
USA_Tennesse56_2013_NA_AID56784_1_2013_11_04_USA_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
PEDV_1931_1_Valladolid_Molpeceres_M_QKV43802_1_2017_01_19_Spain_Swine_PEDV ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
*****:* .*********:*****************************************
ON_018_M_AIP84470_1_2014_02_04_Canada_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
GDS12_M_QCQ19951_1_2011_02_10_China_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
PEDV_YZ_NA_QED40662_1_2016_09_China_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
UNKNOWN_MT843279_NA_QMU85410_1_2013_02_China_Unknown_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPDFVTVAKATTTIVY
USA_Michigan189_2014_NA_AKJ21992_1_2014_02_17_USA_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
USA_Illinois201_2014_NA_AKJ21920_1_2014_03_07_USA_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
PEDV_GER_L01011_K01_15_01_2015_M_SNQ27970_1_NA_NA_Unknown_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
CH_JX_1_2013_NA_AHF20048_1_2013_03_China_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
USA_Illinois194_2014_NA_AKJ22040_1_2014_03_03_USA_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
LZC_M_ABM64779_1_NA_China_Unknown_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
CAN_Quebec334_2014_NA_AKJ22136_1_2014_05_14_Canada_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
CH_SCCD_2014_M_AMR60836_1_2014_11_China_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
CH_SCZY44_2017_M_AZL47207_1_2017_09_09_China_Swine_PEDV TTSVMGRQICIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
GDS09_M_QCQ20077_1_2014_08_01_China_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPDFVTVAKATTTLVY
COL_ValledelCauca05761_2015_NA_QGQ60267_1_2015_05_08_Colombia_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
GDS29_M_QCQ19891_1_2014_07_11_China_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
GD_1_M_AFW99001_1_2011_12_China_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
GDS01_M_AKE53208_1_2012_11_10_China_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
KNU_1704_M_AWM11471_1_2017_11_South_Korea_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
GDS16_M_QCQ19945_1_2011_05_25_China_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
WHZHC72223_NA_APG77339_1_2014_China_Nematode_PEDV TTSVMGLQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
GER_L03209_2019_NA_CAC9433378_1_NA_NA_Unknown_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
USA_NorthCarolina91_2013_NA_AID56958_1_2013_12_08_USA_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
OH9097_14_M_ALM31947_1_2014_10_19_USA_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
USA_Minnesota212_2014_NA_AKJ21908_1_2014_02_13_USA_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
PEDV_GER_L00926_K20_4_01_2014_M_SNQ27896_1_NA_NA_Unknown_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
USA_Kansas432_2014_NA_AKJ21752_1_2014_10_31_USA_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
PC22A_P160_NA_APX42140_1_2015_10_01_USA_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLFVEGYKVATGVQVSQLPNFVTVAKATTTIVY
USA_Tennesse56_2013_NA_AID56784_1_2013_11_04_USA_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
PEDV_1931_1_Valladolid_Molpeceres_M_QKV43802_1_2017_01_19_Spain_Swine_PEDV TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
****** *:********************:****************:**********:**
ON_018_M_AIP84470_1_2014_02_04_Canada_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
GDS12_M_QCQ19951_1_2011_02_10_China_Swine_PEDV GRVGRSVNASSSTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
PEDV_YZ_NA_QED40662_1_2016_09_China_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVITDSEKVLHLV
UNKNOWN_MT843279_NA_QMU85410_1_2013_02_China_Unknown_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
USA_Michigan189_2014_NA_AKJ21992_1_2014_02_17_USA_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
USA_Illinois201_2014_NA_AKJ21920_1_2014_03_07_USA_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
PEDV_GER_L01011_K01_15_01_2015_M_SNQ27970_1_NA_NA_Unknown_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
CH_JX_1_2013_NA_AHF20048_1_2013_03_China_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
USA_Illinois194_2014_NA_AKJ22040_1_2014_03_03_USA_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
LZC_M_ABM64779_1_NA_China_Unknown_PEDV GRVGRSVPASSGTGWAFYVRSKHGDYSAVSNPSAVLTDSEIVLHLV
CAN_Quebec334_2014_NA_AKJ22136_1_2014_05_14_Canada_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
CH_SCCD_2014_M_AMR60836_1_2014_11_China_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
CH_SCZY44_2017_M_AZL47207_1_2017_09_09_China_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
GDS09_M_QCQ20077_1_2014_08_01_China_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
COL_ValledelCauca05761_2015_NA_QGQ60267_1_2015_05_08_Colombia_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
GDS29_M_QCQ19891_1_2014_07_11_China_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPRSVLTDSEKVLHLV
GD_1_M_AFW99001_1_2011_12_China_Swine_PEDV GRVGRSVNASSSTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
GDS01_M_AKE53208_1_2012_11_10_China_Swine_PEDV GRVGRSVNASSSTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
KNU_1704_M_AWM11471_1_2017_11_South_Korea_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
GDS16_M_QCQ19945_1_2011_05_25_China_Swine_PEDV GRVGRSVNASSSTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
WHZHC72223_NA_APG77339_1_2014_China_Nematode_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
GER_L03209_2019_NA_CAC9433378_1_NA_NA_Unknown_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
USA_NorthCarolina91_2013_NA_AID56958_1_2013_12_08_USA_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
OH9097_14_M_ALM31947_1_2014_10_19_USA_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
USA_Minnesota212_2014_NA_AKJ21908_1_2014_02_13_USA_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
PEDV_GER_L00926_K20_4_01_2014_M_SNQ27896_1_NA_NA_Unknown_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
USA_Kansas432_2014_NA_AKJ21752_1_2014_10_31_USA_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
PC22A_P160_NA_APX42140_1_2015_10_01_USA_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHIV
USA_Tennesse56_2013_NA_AID56784_1_2013_11_04_USA_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
PEDV_1931_1_Valladolid_Molpeceres_M_QKV43802_1_2017_01_19_Spain_Swine_PEDV GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
******* ***.******************** :*:**** ***:*
>ON_018_M_AIP84470_1_2014_02_04_Canada_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS12_M_QCQ19951_1_2011_02_10_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGCTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_YZ_NA_QED40662_1_2016_09_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTATCACAGATAGTGAGAAAGTGCTTCATTTAGTC >UNKNOWN_MT843279_NA_QMU85410_1_2013_02_China_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTGTCACTTTTTGATGCATGGGCTAGCTTCCAGGTCAACTGGGTCTTTTTCGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTATTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACTGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTGCCTGATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Michigan189_2014_NA_AKJ21992_1_2014_02_17_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Illinois201_2014_NA_AKJ21920_1_2014_03_07_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_GER_L01011_K01_15_01_2015_M_SNQ27970_1_NA_NA_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >CH_JX_1_2013_NA_AHF20048_1_2013_03_China_Swine_PEDV ATGTCTAACGGTTCTATTCCTGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Illinois194_2014_NA_AKJ22040_1_2014_03_03_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >LZC_M_ABM64779_1_NA_China_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTGTCACTTTTTGACGCATCGCCTAGCTTCCAGGTCAACTGGGTCTTTTTCGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTATTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACTGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCCCGGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTATTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGATTGTGCTTCATTTAGTC >CAN_Quebec334_2014_NA_AKJ22136_1_2014_05_14_Canada_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTACGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >CH_SCCD_2014_M_AMR60836_1_2014_11_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >CH_SCZY44_2017_M_AZL47207_1_2017_09_09_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCACTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAACAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGATCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCTTCTGGCACTGGTTGGGCTTTCTATGTCCGGTCGAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS09_M_QCQ20077_1_2014_08_01_China_Swine_PEDV ATGTCTAACGGTTTTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTGTCACTTTTTAATGCATGGGCTAGCTTCCAGGTCAACTGGGTCTTTTTCGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTATTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACTGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTGCCTGATTTCGTCACAGTCGCCAAGGCCACTACAACACTTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >COL_ValledelCauca05761_2015_NA_QGQ60267_1_2015_05_08_Colombia_Swine_PEDV ATGTCTAACGATTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS29_M_QCQ19891_1_2014_07_11_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGGTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GD_1_M_AFW99001_1_2011_12_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGCTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS01_M_AKE53208_1_2012_11_10_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGCTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >KNU_1704_M_AWM11471_1_2017_11_South_Korea_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATAGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS16_M_QCQ19945_1_2011_05_25_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >WHZHC72223_NA_APG77339_1_2014_China_Nematode_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTTCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTTAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCTACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GER_L03209_2019_NA_CAC9433378_1_NA_NA_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTTTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_NorthCarolina91_2013_NA_AID56958_1_2013_12_08_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >OH9097_14_M_ALM31947_1_2014_10_19_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Minnesota212_2014_NA_AKJ21908_1_2014_02_13_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACCACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_GER_L00926_K20_4_01_2014_M_SNQ27896_1_NA_NA_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Kansas432_2014_NA_AKJ21752_1_2014_10_31_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PC22A_P160_NA_APX42140_1_2015_10_01_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGTTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATATAGTC >USA_Tennesse56_2013_NA_AID56784_1_2013_11_04_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_1931_1_Valladolid_Molpeceres_M_QKV43802_1_2017_01_19_Spain_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTTTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC
>ON_018_M_AIP84470_1_2014_02_04_Canada_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >GDS12_M_QCQ19951_1_2011_02_10_China_Swine_PEDV MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >PEDV_YZ_NA_QED40662_1_2016_09_China_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVITDSEKVLHLV >UNKNOWN_MT843279_NA_QMU85410_1_2013_02_China_Unknown_PEDV MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPDFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >USA_Michigan189_2014_NA_AKJ21992_1_2014_02_17_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Illinois201_2014_NA_AKJ21920_1_2014_03_07_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_GER_L01011_K01_15_01_2015_M_SNQ27970_1_NA_NA_Unknown_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >CH_JX_1_2013_NA_AHF20048_1_2013_03_China_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Illinois194_2014_NA_AKJ22040_1_2014_03_03_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >LZC_M_ABM64779_1_NA_China_Unknown_PEDV MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYGVKMAILWILWPLVLALSLFDASPSFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVPASSGTGWAFYVRSKHGDYSAVSNPSAVLTDSEIVLHLV >CAN_Quebec334_2014_NA_AKJ22136_1_2014_05_14_Canada_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >CH_SCCD_2014_M_AMR60836_1_2014_11_China_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >CH_SCZY44_2017_M_AZL47207_1_2017_09_09_China_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQICIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >GDS09_M_QCQ20077_1_2014_08_01_China_Swine_PEDV MSNGFIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYGVKMAILWILWPLVLALSLFNAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPDFVTVAKATTTLVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >COL_ValledelCauca05761_2015_NA_QGQ60267_1_2015_05_08_Colombia_Swine_PEDV MSNDSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >GDS29_M_QCQ19891_1_2014_07_11_China_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPRSVLTDSEKVLHLV >GD_1_M_AFW99001_1_2011_12_China_Swine_PEDV MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >GDS01_M_AKE53208_1_2012_11_10_China_Swine_PEDV MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >KNU_1704_M_AWM11471_1_2017_11_South_Korea_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >GDS16_M_QCQ19945_1_2011_05_25_China_Swine_PEDV MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >WHZHC72223_NA_APG77339_1_2014_China_Nematode_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFSFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGLQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >GER_L03209_2019_NA_CAC9433378_1_NA_NA_Unknown_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_NorthCarolina91_2013_NA_AID56958_1_2013_12_08_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >OH9097_14_M_ALM31947_1_2014_10_19_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Minnesota212_2014_NA_AKJ21908_1_2014_02_13_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_GER_L00926_K20_4_01_2014_M_SNQ27896_1_NA_NA_Unknown_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Kansas432_2014_NA_AKJ21752_1_2014_10_31_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PC22A_P160_NA_APX42140_1_2015_10_01_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLFVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHIV >USA_Tennesse56_2013_NA_AID56784_1_2013_11_04_USA_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_1931_1_Valladolid_Molpeceres_M_QKV43802_1_2017_01_19_Spain_Swine_PEDV MSNGSIPVDEVIQHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYGVKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
Reading sequence file /data//pss_subsets/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result/original_alignment/codeml/fasta/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1
Found 30 sequences of length 690
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 0.9%
Found 17 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 2
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 30 polymorphic sites
**p-Value(s)**
----------
NSS: 5.54e-01 (1000 permutations)
Max Chi^2: 4.47e-01 (1000 permutations)
PHI (Permutation): 5.83e-01 (1000 permutations)
PHI (Normal): 4.04e-01
#NEXUS
[ID: 0469955924]
begin taxa;
dimensions ntax=30;
taxlabels
CH_SCCD_2014_M_AMR60836_1_2014_11_China_Swine_PEDV
CAN_Quebec334_2014_NA_AKJ22136_1_2014_05_14_Canada_Swine_PEDV
CH_SCZY44_2017_M_AZL47207_1_2017_09_09_China_Swine_PEDV
GD_1_M_AFW99001_1_2011_12_China_Swine_PEDV
GDS29_M_QCQ19891_1_2014_07_11_China_Swine_PEDV
GDS01_M_AKE53208_1_2012_11_10_China_Swine_PEDV
GER_L03209_2019_NA_CAC9433378_1_NA_NA_Unknown_PEDV
WHZHC72223_NA_APG77339_1_2014_China_Nematode_PEDV
USA_Kansas432_2014_NA_AKJ21752_1_2014_10_31_USA_Swine_PEDV
PEDV_GER_L00926_K20_4_01_2014_M_SNQ27896_1_NA_NA_Unknown_PEDV
UNKNOWN_MT843279_NA_QMU85410_1_2013_02_China_Unknown_PEDV
PEDV_1931_1_Valladolid_Molpeceres_M_QKV43802_1_2017_01_19_Spain_Swine_PEDV
CH_JX_1_2013_NA_AHF20048_1_2013_03_China_Swine_PEDV
ON_018_M_AIP84470_1_2014_02_04_Canada_Swine_PEDV
PEDV_YZ_NA_QED40662_1_2016_09_China_Swine_PEDV
GDS12_M_QCQ19951_1_2011_02_10_China_Swine_PEDV
USA_Illinois201_2014_NA_AKJ21920_1_2014_03_07_USA_Swine_PEDV
USA_Michigan189_2014_NA_AKJ21992_1_2014_02_17_USA_Swine_PEDV
PEDV_GER_L01011_K01_15_01_2015_M_SNQ27970_1_NA_NA_Unknown_PEDV
LZC_M_ABM64779_1_NA_China_Unknown_PEDV
GDS09_M_QCQ20077_1_2014_08_01_China_Swine_PEDV
COL_ValledelCauca05761_2015_NA_QGQ60267_1_2015_05_08_Colombia_Swine_PEDV
GDS16_M_QCQ19945_1_2011_05_25_China_Swine_PEDV
KNU_1704_M_AWM11471_1_2017_11_South_Korea_Swine_PEDV
USA_Minnesota212_2014_NA_AKJ21908_1_2014_02_13_USA_Swine_PEDV
USA_NorthCarolina91_2013_NA_AID56958_1_2013_12_08_USA_Swine_PEDV
OH9097_14_M_ALM31947_1_2014_10_19_USA_Swine_PEDV
USA_Illinois194_2014_NA_AKJ22040_1_2014_03_03_USA_Swine_PEDV
USA_Tennesse56_2013_NA_AID56784_1_2013_11_04_USA_Swine_PEDV
PC22A_P160_NA_APX42140_1_2015_10_01_USA_Swine_PEDV
;
end;
begin trees;
translate
1 CH_SCCD_2014_M_AMR60836_1_2014_11_China_Swine_PEDV,
2 CAN_Quebec334_2014_NA_AKJ22136_1_2014_05_14_Canada_Swine_PEDV,
3 CH_SCZY44_2017_M_AZL47207_1_2017_09_09_China_Swine_PEDV,
4 GD_1_M_AFW99001_1_2011_12_China_Swine_PEDV,
5 GDS29_M_QCQ19891_1_2014_07_11_China_Swine_PEDV,
6 GDS01_M_AKE53208_1_2012_11_10_China_Swine_PEDV,
7 GER_L03209_2019_NA_CAC9433378_1_NA_NA_Unknown_PEDV,
8 WHZHC72223_NA_APG77339_1_2014_China_Nematode_PEDV,
9 USA_Kansas432_2014_NA_AKJ21752_1_2014_10_31_USA_Swine_PEDV,
10 PEDV_GER_L00926_K20_4_01_2014_M_SNQ27896_1_NA_NA_Unknown_PEDV,
11 UNKNOWN_MT843279_NA_QMU85410_1_2013_02_China_Unknown_PEDV,
12 PEDV_1931_1_Valladolid_Molpeceres_M_QKV43802_1_2017_01_19_Spain_Swine_PEDV,
13 CH_JX_1_2013_NA_AHF20048_1_2013_03_China_Swine_PEDV,
14 ON_018_M_AIP84470_1_2014_02_04_Canada_Swine_PEDV,
15 PEDV_YZ_NA_QED40662_1_2016_09_China_Swine_PEDV,
16 GDS12_M_QCQ19951_1_2011_02_10_China_Swine_PEDV,
17 USA_Illinois201_2014_NA_AKJ21920_1_2014_03_07_USA_Swine_PEDV,
18 USA_Michigan189_2014_NA_AKJ21992_1_2014_02_17_USA_Swine_PEDV,
19 PEDV_GER_L01011_K01_15_01_2015_M_SNQ27970_1_NA_NA_Unknown_PEDV,
20 LZC_M_ABM64779_1_NA_China_Unknown_PEDV,
21 GDS09_M_QCQ20077_1_2014_08_01_China_Swine_PEDV,
22 COL_ValledelCauca05761_2015_NA_QGQ60267_1_2015_05_08_Colombia_Swine_PEDV,
23 GDS16_M_QCQ19945_1_2011_05_25_China_Swine_PEDV,
24 KNU_1704_M_AWM11471_1_2017_11_South_Korea_Swine_PEDV,
25 USA_Minnesota212_2014_NA_AKJ21908_1_2014_02_13_USA_Swine_PEDV,
26 USA_NorthCarolina91_2013_NA_AID56958_1_2013_12_08_USA_Swine_PEDV,
27 OH9097_14_M_ALM31947_1_2014_10_19_USA_Swine_PEDV,
28 USA_Illinois194_2014_NA_AKJ22040_1_2014_03_03_USA_Swine_PEDV,
29 USA_Tennesse56_2013_NA_AID56784_1_2013_11_04_USA_Swine_PEDV,
30 PC22A_P160_NA_APX42140_1_2015_10_01_USA_Swine_PEDV
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:4.955416e-04,2:1.238848e-03,3:4.521410e-03,5:1.227831e-03,8:3.088128e-03,9:4.933731e-04,10:4.864824e-04,13:1.137835e-03,14:4.633462e-04,15:1.186941e-03,17:4.673377e-04,18:5.096129e-04,19:4.904967e-04,22:1.190250e-03,24:1.152536e-03,25:1.199251e-03,26:4.949570e-04,27:4.766242e-04,28:4.971403e-04,29:4.829150e-04,30:1.910166e-03,(((4:4.863256e-04,6:4.818305e-04,16:4.889162e-04)0.956:1.176445e-03,23:5.307703e-04)0.999:2.089271e-03,((11:5.032770e-04,21:2.662257e-03)0.998:2.040209e-03,20:7.543465e-03)1.000:4.000982e-03)1.000:4.738281e-03,(7:5.340479e-04,12:5.346506e-04)0.928:1.166052e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:4.955416e-04,2:1.238848e-03,3:4.521410e-03,5:1.227831e-03,8:3.088128e-03,9:4.933731e-04,10:4.864824e-04,13:1.137835e-03,14:4.633462e-04,15:1.186941e-03,17:4.673377e-04,18:5.096129e-04,19:4.904967e-04,22:1.190250e-03,24:1.152536e-03,25:1.199251e-03,26:4.949570e-04,27:4.766242e-04,28:4.971403e-04,29:4.829150e-04,30:1.910166e-03,(((4:4.863256e-04,6:4.818305e-04,16:4.889162e-04):1.176445e-03,23:5.307703e-04):2.089271e-03,((11:5.032770e-04,21:2.662257e-03):2.040209e-03,20:7.543465e-03):4.000982e-03):4.738281e-03,(7:5.340479e-04,12:5.346506e-04):1.166052e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1300.41 -1319.36
2 -1300.43 -1320.87
--------------------------------------
TOTAL -1300.42 -1320.38
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.076140 0.000149 0.053899 0.100009 0.075116 1285.71 1321.69 1.000
r(A<->C){all} 0.137483 0.002801 0.045178 0.238309 0.130978 508.98 551.43 1.001
r(A<->G){all} 0.167082 0.002936 0.068154 0.271167 0.163665 523.71 577.92 1.002
r(A<->T){all} 0.114804 0.001706 0.037762 0.194427 0.111247 831.19 837.75 1.000
r(C<->G){all} 0.106598 0.002084 0.026648 0.193759 0.100501 360.75 463.85 1.002
r(C<->T){all} 0.365612 0.004370 0.235394 0.492322 0.363366 608.89 612.39 1.000
r(G<->T){all} 0.108420 0.001594 0.039431 0.190899 0.103180 655.15 672.56 1.001
pi(A){all} 0.219769 0.000231 0.189476 0.248068 0.219464 954.97 977.78 1.000
pi(C){all} 0.220062 0.000246 0.188979 0.249649 0.219458 1230.66 1235.43 1.000
pi(G){all} 0.232471 0.000261 0.199546 0.262412 0.232373 1096.81 1119.79 1.000
pi(T){all} 0.327699 0.000295 0.295398 0.361517 0.327326 1007.37 1068.95 1.000
alpha{1,2} 0.779644 0.752872 0.000217 2.512613 0.489435 1089.93 1109.33 1.000
alpha{3} 1.444429 1.301131 0.002920 3.812072 1.135705 1104.57 1221.85 1.000
pinvar{all} 0.295641 0.033936 0.000494 0.610508 0.281960 852.94 860.35 1.004
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 30 ls = 226
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 5 5 5 3 5 5 | Ser TCT 7 7 7 7 7 7 | Tyr TAT 4 5 4 6 4 4 | Cys TGT 0 0 0 0 0 0
TTC 6 6 6 8 6 6 | TCC 1 0 1 0 1 1 | TAC 5 4 5 3 5 5 | TGC 2 2 2 2 2 2
Leu TTA 3 2 3 1 3 3 | TCA 4 5 4 5 4 4 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 3 3 3 5 3 3 | TCG 1 0 1 0 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 11 11 11 11 11 11
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 13 14 13 13 13 13 | Pro CCT 3 3 3 3 3 3 | His CAT 3 3 3 3 3 3 | Arg CGT 2 2 2 2 2 2
CTC 3 3 2 3 3 3 | CCC 1 1 1 1 1 1 | CAC 2 2 2 2 2 2 | CGC 1 1 1 1 1 1
CTA 3 3 3 3 3 3 | CCA 2 2 2 2 2 2 | Gln CAA 2 1 2 1 2 2 | CGA 1 1 1 1 1 1
CTG 3 3 3 3 3 3 | CCG 1 1 1 1 1 1 | CAG 4 4 4 4 4 4 | CGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 6 6 6 6 6 6 | Thr ACT 7 7 7 8 7 7 | Asn AAT 8 7 8 6 8 8 | Ser AGT 5 5 5 5 5 5
ATC 3 3 4 3 3 3 | ACC 0 0 0 0 0 0 | AAC 2 3 2 3 2 2 | AGC 3 4 3 3 3 3
ATA 4 4 4 4 4 4 | ACA 9 9 9 8 9 9 | Lys AAA 2 2 2 2 2 2 | Arg AGA 1 1 1 1 1 1
Met ATG 6 6 6 6 6 6 | ACG 2 2 2 2 2 2 | AAG 4 4 4 4 4 4 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 4 4 4 4 4 4 | Ala GCT 8 8 8 8 8 8 | Asp GAT 3 3 3 4 3 3 | Gly GGT 6 6 6 6 6 6
GTC 11 11 11 11 11 11 | GCC 2 2 2 2 2 2 | GAC 2 2 2 2 2 2 | GGC 6 5 6 6 6 6
GTA 5 5 5 5 5 5 | GCA 3 3 3 3 3 3 | Glu GAA 1 2 1 2 1 1 | GGA 2 2 2 2 2 2
GTG 7 7 7 8 7 7 | GCG 2 3 2 2 2 2 | GAG 3 3 3 3 3 3 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 5 5 5 3 5 5 | Ser TCT 7 7 7 7 7 7 | Tyr TAT 4 4 4 6 3 4 | Cys TGT 0 0 0 0 0 0
TTC 6 6 6 8 6 6 | TCC 1 1 1 0 1 1 | TAC 5 5 5 3 6 5 | TGC 2 2 2 2 2 2
Leu TTA 3 3 3 2 3 3 | TCA 4 4 4 5 4 4 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 3 3 3 4 3 3 | TCG 1 1 1 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 11 11 11 10 11 11
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 13 13 13 13 13 13 | Pro CCT 3 4 3 4 3 3 | His CAT 3 3 3 3 3 3 | Arg CGT 2 2 2 2 2 2
CTC 3 3 3 3 3 3 | CCC 1 0 1 1 1 1 | CAC 2 2 2 2 2 2 | CGC 1 1 1 1 1 1
CTA 3 3 3 3 3 3 | CCA 2 2 2 2 2 2 | Gln CAA 2 2 2 1 2 2 | CGA 1 1 1 1 1 1
CTG 3 3 3 3 3 3 | CCG 1 1 1 2 1 1 | CAG 4 4 4 4 4 4 | CGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 6 6 6 7 6 6 | Thr ACT 7 7 7 8 7 7 | Asn AAT 8 8 8 6 8 8 | Ser AGT 5 5 5 5 5 5
ATC 3 3 3 3 3 3 | ACC 0 0 0 0 0 0 | AAC 2 2 2 3 2 2 | AGC 3 3 3 3 3 3
ATA 4 4 4 4 4 4 | ACA 9 9 9 8 9 9 | Lys AAA 2 2 2 1 2 2 | Arg AGA 1 1 1 1 1 1
Met ATG 6 6 6 6 6 6 | ACG 2 2 2 2 2 2 | AAG 4 4 4 4 4 4 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 4 4 4 4 4 4 | Ala GCT 8 8 8 7 8 8 | Asp GAT 3 3 3 2 3 3 | Gly GGT 6 6 6 6 6 6
GTC 11 11 11 11 11 11 | GCC 2 2 2 2 2 2 | GAC 2 2 2 3 2 2 | GGC 6 6 6 6 6 6
GTA 5 5 5 5 5 5 | GCA 3 3 3 3 3 3 | Glu GAA 1 1 1 2 1 1 | GGA 2 2 2 2 2 2
GTG 7 7 7 8 7 7 | GCG 2 2 2 2 2 2 | GAG 3 3 3 3 3 3 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 5 4 5 5 5 5 | Ser TCT 8 6 7 7 7 7 | Tyr TAT 4 6 4 4 5 5 | Cys TGT 0 0 0 0 0 0
TTC 6 8 6 6 6 6 | TCC 0 0 1 1 0 0 | TAC 5 3 5 5 4 4 | TGC 2 2 2 2 2 2
Leu TTA 3 1 3 3 2 2 | TCA 3 5 4 4 5 5 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 3 5 3 3 3 3 | TCG 2 0 1 1 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 11 11 11 11 11 11
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 13 14 13 13 14 14 | Pro CCT 3 3 3 3 3 3 | His CAT 2 3 3 3 3 3 | Arg CGT 2 2 2 2 2 2
CTC 3 3 3 3 3 3 | CCC 1 1 1 1 1 1 | CAC 3 2 2 2 2 2 | CGC 1 1 1 1 1 1
CTA 3 3 3 3 3 3 | CCA 2 2 2 2 2 2 | Gln CAA 2 1 2 2 1 1 | CGA 1 1 1 1 1 1
CTG 3 3 3 3 3 3 | CCG 1 1 1 1 1 1 | CAG 4 4 4 4 4 4 | CGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 6 5 6 6 6 6 | Thr ACT 7 8 7 7 7 7 | Asn AAT 7 7 8 8 7 7 | Ser AGT 5 5 5 4 5 5
ATC 4 3 3 3 3 3 | ACC 0 0 0 0 0 0 | AAC 3 3 2 2 3 3 | AGC 3 3 3 3 4 4
ATA 4 4 4 4 4 4 | ACA 9 8 9 9 9 9 | Lys AAA 2 2 2 2 2 2 | Arg AGA 1 1 1 1 1 1
Met ATG 6 6 6 6 6 6 | ACG 2 2 2 2 2 2 | AAG 4 4 4 4 4 4 | AGG 1 1 1 2 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 4 4 4 4 4 4 | Ala GCT 8 8 8 8 8 8 | Asp GAT 3 3 4 3 3 3 | Gly GGT 6 6 5 6 6 6
GTC 10 11 11 11 11 11 | GCC 2 2 2 2 2 2 | GAC 2 2 2 2 2 2 | GGC 6 6 6 6 5 5
GTA 5 5 5 5 5 5 | GCA 3 3 3 3 3 3 | Glu GAA 1 2 1 1 2 2 | GGA 2 2 2 2 2 2
GTG 8 8 7 7 7 7 | GCG 1 2 2 2 3 3 | GAG 3 3 3 3 3 3 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 5 5 5 6 5 5 | Ser TCT 7 7 8 7 7 7 | Tyr TAT 4 5 4 4 4 4 | Cys TGT 0 0 0 0 0 0
TTC 6 6 6 5 6 6 | TCC 1 0 1 1 1 1 | TAC 5 4 5 5 5 5 | TGC 2 2 2 2 2 2
Leu TTA 3 2 3 3 3 3 | TCA 4 5 4 4 4 4 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 3 4 3 3 3 3 | TCG 1 0 1 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 11 11 11 11 11 11
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 13 14 13 13 13 13 | Pro CCT 3 3 3 3 3 3 | His CAT 3 3 3 3 3 3 | Arg CGT 2 2 2 2 2 2
CTC 3 3 3 3 3 3 | CCC 1 1 1 1 1 1 | CAC 2 2 2 2 2 2 | CGC 1 1 1 1 1 1
CTA 3 3 4 3 3 3 | CCA 2 2 2 2 2 2 | Gln CAA 2 1 2 2 2 2 | CGA 1 1 0 1 1 1
CTG 3 2 3 3 3 3 | CCG 1 1 1 1 1 1 | CAG 4 4 4 4 4 4 | CGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 5 6 6 6 6 6 | Thr ACT 7 7 7 7 7 7 | Asn AAT 8 7 8 8 8 8 | Ser AGT 5 5 5 5 5 5
ATC 3 3 3 3 3 3 | ACC 0 0 0 0 0 0 | AAC 2 3 2 2 2 2 | AGC 3 4 3 3 3 3
ATA 5 4 4 4 4 4 | ACA 9 9 9 9 9 9 | Lys AAA 2 2 2 2 2 2 | Arg AGA 1 1 1 1 1 1
Met ATG 6 6 6 6 6 6 | ACG 2 2 2 2 2 2 | AAG 4 4 4 4 4 4 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 4 4 5 4 4 4 | Ala GCT 8 8 7 8 8 8 | Asp GAT 3 3 3 3 3 3 | Gly GGT 6 6 6 6 6 6
GTC 11 11 10 11 11 11 | GCC 2 2 2 2 2 2 | GAC 2 2 2 2 2 2 | GGC 6 5 6 6 6 6
GTA 5 5 5 5 5 5 | GCA 3 3 3 3 3 3 | Glu GAA 1 2 1 1 1 1 | GGA 2 2 2 2 2 2
GTG 7 7 8 7 7 7 | GCG 2 3 1 2 2 2 | GAG 3 3 3 3 3 3 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 5 5 5 6 5 6 | Ser TCT 7 7 7 7 7 7 | Tyr TAT 4 4 4 4 4 4 | Cys TGT 0 0 0 0 0 0
TTC 6 6 6 6 6 5 | TCC 1 1 1 1 1 1 | TAC 5 5 5 5 5 5 | TGC 2 2 2 2 2 2
Leu TTA 3 3 3 2 3 3 | TCA 4 4 4 4 4 4 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 3 3 3 3 3 3 | TCG 1 1 1 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 11 11 11 11 11 11
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 13 13 13 12 13 13 | Pro CCT 3 3 3 3 3 3 | His CAT 3 3 3 3 3 3 | Arg CGT 2 2 2 2 2 2
CTC 3 3 3 3 3 3 | CCC 1 1 1 1 1 1 | CAC 2 2 2 2 2 2 | CGC 1 1 1 1 1 1
CTA 3 3 3 3 3 3 | CCA 2 2 2 2 2 2 | Gln CAA 2 2 2 2 2 2 | CGA 1 1 1 1 1 1
CTG 3 3 3 3 3 3 | CCG 1 1 1 1 1 1 | CAG 4 4 4 4 4 4 | CGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 6 6 6 6 6 6 | Thr ACT 6 7 7 7 7 7 | Asn AAT 8 8 8 8 8 8 | Ser AGT 5 5 5 5 5 5
ATC 3 3 3 3 3 3 | ACC 1 0 0 0 0 0 | AAC 2 2 2 2 2 2 | AGC 3 3 3 3 3 3
ATA 4 4 4 5 4 4 | ACA 9 9 9 9 9 9 | Lys AAA 2 2 2 2 2 2 | Arg AGA 1 1 1 1 1 1
Met ATG 6 6 6 6 6 6 | ACG 2 2 2 2 2 2 | AAG 4 4 4 4 4 4 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 4 4 4 4 4 4 | Ala GCT 8 8 8 8 8 8 | Asp GAT 3 3 3 3 3 3 | Gly GGT 6 6 6 6 6 6
GTC 11 11 11 11 11 11 | GCC 2 2 2 2 2 2 | GAC 2 2 2 2 2 2 | GGC 6 6 6 6 6 6
GTA 5 5 5 5 5 5 | GCA 3 3 3 3 3 3 | Glu GAA 1 1 1 1 1 1 | GGA 2 2 2 2 2 2
GTG 7 7 7 7 7 7 | GCG 2 2 2 2 2 2 | GAG 3 3 3 3 3 3 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C302
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21976 A:0.22124 G:0.23304
#2: C126
position 1: T:0.22124 C:0.20354 A:0.28319 G:0.29204
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37611 C:0.21681 A:0.18584 G:0.22124
Average T:0.32448 C:0.21829 A:0.22271 G:0.23451
#3: C440
position 1: T:0.23009 C:0.19912 A:0.28319 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21829 A:0.22271 G:0.23304
#4: C489
position 1: T:0.22566 C:0.19912 A:0.27434 G:0.30088
position 2: T:0.38053 C:0.23009 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.17699 G:0.23009
Average T:0.32596 C:0.21681 A:0.21681 G:0.24041
#5: C552
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21976 A:0.22124 G:0.23304
#6: C506
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21976 A:0.22124 G:0.23304
#7: C372
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21976 A:0.22124 G:0.23304
#8: C60
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37611 C:0.21681 A:0.18584 G:0.22124
Average T:0.32743 C:0.21829 A:0.22124 G:0.23304
#9: C505
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21976 A:0.22124 G:0.23304
#10: C274
position 1: T:0.22566 C:0.20796 A:0.27434 G:0.29204
position 2: T:0.38496 C:0.23894 A:0.19027 G:0.18584
position 3: T:0.36726 C:0.22566 A:0.17699 G:0.23009
Average T:0.32596 C:0.22419 A:0.21386 G:0.23599
#11: C31
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.36726 C:0.22566 A:0.18584 G:0.22124
Average T:0.32448 C:0.22124 A:0.22124 G:0.23304
#12: C65
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21976 A:0.22124 G:0.23304
#13: C71
position 1: T:0.23009 C:0.20354 A:0.28319 G:0.28319
position 2: T:0.38053 C:0.23009 A:0.19912 G:0.19027
position 3: T:0.36726 C:0.22566 A:0.18142 G:0.22566
Average T:0.32596 C:0.21976 A:0.22124 G:0.23304
#14: C124
position 1: T:0.22566 C:0.20354 A:0.27434 G:0.29646
position 2: T:0.38496 C:0.22566 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.17699 G:0.23009
Average T:0.32743 C:0.21681 A:0.21681 G:0.23894
#15: C103
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.20354 G:0.18584
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21976 A:0.22271 G:0.23156
#16: C144
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.36726 C:0.22124 A:0.18584 G:0.22566
Average T:0.32448 C:0.21976 A:0.22124 G:0.23451
#17: C168
position 1: T:0.22124 C:0.20354 A:0.28319 G:0.29204
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37611 C:0.21681 A:0.18584 G:0.22124
Average T:0.32448 C:0.21829 A:0.22271 G:0.23451
#18: C117
position 1: T:0.22124 C:0.20354 A:0.28319 G:0.29204
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37611 C:0.21681 A:0.18584 G:0.22124
Average T:0.32448 C:0.21829 A:0.22271 G:0.23451
#19: C247
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.36726 C:0.22124 A:0.19027 G:0.22124
Average T:0.32448 C:0.21976 A:0.22271 G:0.23304
#20: C130
position 1: T:0.22566 C:0.19912 A:0.28319 G:0.29204
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37611 C:0.21681 A:0.18584 G:0.22124
Average T:0.32596 C:0.21681 A:0.22271 G:0.23451
#21: C660
position 1: T:0.23451 C:0.20354 A:0.27876 G:0.28319
position 2: T:0.38496 C:0.23009 A:0.19912 G:0.18584
position 3: T:0.37611 C:0.21681 A:0.18584 G:0.22124
Average T:0.33186 C:0.21681 A:0.22124 G:0.23009
#22: C180
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37611 C:0.21681 A:0.18584 G:0.22124
Average T:0.32743 C:0.21829 A:0.22124 G:0.23304
#23: C624
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21976 A:0.22124 G:0.23304
#24: C298
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21976 A:0.22124 G:0.23304
#25: C562
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.36726 C:0.22566 A:0.18584 G:0.22124
Average T:0.32448 C:0.22124 A:0.22124 G:0.23304
#26: C363
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21976 A:0.22124 G:0.23304
#27: C547
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21976 A:0.22124 G:0.23304
#28: C310
position 1: T:0.23009 C:0.19912 A:0.28319 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21829 A:0.22271 G:0.23304
#29: C648
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37168 C:0.22124 A:0.18584 G:0.22124
Average T:0.32596 C:0.21976 A:0.22124 G:0.23304
#30: C337
position 1: T:0.23009 C:0.20354 A:0.27876 G:0.28761
position 2: T:0.37611 C:0.23451 A:0.19912 G:0.19027
position 3: T:0.37611 C:0.21681 A:0.18584 G:0.22124
Average T:0.32743 C:0.21829 A:0.22124 G:0.23304
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 148 | Ser S TCT 211 | Tyr Y TAT 129 | Cys C TGT 0
TTC 184 | TCC 22 | TAC 141 | TGC 60
Leu L TTA 80 | TCA 126 | *** * TAA 0 | *** * TGA 0
TTG 96 | TCG 25 | TAG 0 | Trp W TGG 329
------------------------------------------------------------------------------
Leu L CTT 394 | Pro P CCT 92 | His H CAT 89 | Arg R CGT 60
CTC 89 | CCC 29 | CAC 61 | CGC 30
CTA 91 | CCA 60 | Gln Q CAA 53 | CGA 29
CTG 89 | CCG 31 | CAG 120 | CGG 60
------------------------------------------------------------------------------
Ile I ATT 179 | Thr T ACT 212 | Asn N AAT 230 | Ser S AGT 149
ATC 92 | ACC 1 | AAC 68 | AGC 94
ATA 122 | ACA 267 | Lys K AAA 59 | Arg R AGA 30
Met M ATG 180 | ACG 60 | AAG 120 | AGG 31
------------------------------------------------------------------------------
Val V GTT 121 | Ala A GCT 238 | Asp D GAT 91 | Gly G GGT 179
GTC 328 | GCC 60 | GAC 61 | GGC 176
GTA 150 | GCA 90 | Glu E GAA 37 | GGA 60
GTG 215 | GCG 62 | GAG 90 | GGG 0
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.22876 C:0.20310 A:0.27935 G:0.28879
position 2: T:0.37729 C:0.23392 A:0.19897 G:0.18982
position 3: T:0.37198 C:0.22065 A:0.18496 G:0.22242
Average T:0.32601 C:0.21922 A:0.22109 G:0.23368
Model 1: NearlyNeutral (2 categories)
TREE # 1: (12, 11, 13, 16, 21, 27, 26, 8, 1, 3, 6, 5, 7, 15, 19, 25, 23, 24, 9, 29, 28, (((17, 18, 2), 20), ((4, 14), 10)), (22, 30)); MP score: 46
check convergence..
lnL(ntime: 36 np: 39): -1253.190689 +0.000000
31..12 31..11 31..13 31..16 31..21 31..27 31..26 31..8 31..1 31..3 31..6 31..5 31..7 31..15 31..19 31..25 31..23 31..24 31..9 31..29 31..28 31..32 32..33 33..34 34..17 34..18 34..2 33..20 32..35 35..36 36..4 36..14 35..10 31..37 37..22 37..30
0.000004 0.004554 0.027566 0.004564 0.018309 0.000004 0.000004 0.004554 0.000004 0.004557 0.000004 0.000004 0.000004 0.004556 0.004571 0.004555 0.000004 0.000004 0.000004 0.000004 0.009129 0.027223 0.009640 0.004541 0.000004 0.000004 0.000004 0.000004 0.023122 0.009409 0.000004 0.013650 0.046185 0.004554 0.000004 0.000004 2.239557 0.701787 0.035942
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.225312
(12: 0.000004, 11: 0.004554, 13: 0.027566, 16: 0.004564, 21: 0.018309, 27: 0.000004, 26: 0.000004, 8: 0.004554, 1: 0.000004, 3: 0.004557, 6: 0.000004, 5: 0.000004, 7: 0.000004, 15: 0.004556, 19: 0.004571, 25: 0.004555, 23: 0.000004, 24: 0.000004, 9: 0.000004, 29: 0.000004, 28: 0.009129, (((17: 0.000004, 18: 0.000004, 2: 0.000004): 0.004541, 20: 0.000004): 0.009640, ((4: 0.000004, 14: 0.013650): 0.009409, 10: 0.046185): 0.023122): 0.027223, (22: 0.000004, 30: 0.000004): 0.004554);
(C65: 0.000004, C31: 0.004554, C71: 0.027566, C144: 0.004564, C660: 0.018309, C547: 0.000004, C363: 0.000004, C60: 0.004554, C302: 0.000004, C440: 0.004557, C506: 0.000004, C552: 0.000004, C372: 0.000004, C103: 0.004556, C247: 0.004571, C562: 0.004555, C624: 0.000004, C298: 0.000004, C505: 0.000004, C648: 0.000004, C310: 0.009129, (((C168: 0.000004, C117: 0.000004, C126: 0.000004): 0.004541, C130: 0.000004): 0.009640, ((C489: 0.000004, C124: 0.013650): 0.009409, C274: 0.046185): 0.023122): 0.027223, (C180: 0.000004, C337: 0.000004): 0.004554);
Detailed output identifying parameters
kappa (ts/tv) = 2.23956
MLEs of dN/dS (w) for site classes (K=2)
p: 0.70179 0.29821
w: 0.03594 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
31..11 0.005 494.5 183.5 0.3234 0.0010 0.0030 0.5 0.5
31..13 0.028 494.5 183.5 0.3234 0.0059 0.0181 2.9 3.3
31..16 0.005 494.5 183.5 0.3234 0.0010 0.0030 0.5 0.6
31..21 0.018 494.5 183.5 0.3234 0.0039 0.0120 1.9 2.2
31..27 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
31..26 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
31..8 0.005 494.5 183.5 0.3234 0.0010 0.0030 0.5 0.5
31..1 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
31..3 0.005 494.5 183.5 0.3234 0.0010 0.0030 0.5 0.6
31..6 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
31..5 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
31..7 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
31..15 0.005 494.5 183.5 0.3234 0.0010 0.0030 0.5 0.6
31..19 0.005 494.5 183.5 0.3234 0.0010 0.0030 0.5 0.6
31..25 0.005 494.5 183.5 0.3234 0.0010 0.0030 0.5 0.5
31..23 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
31..24 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
31..9 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
31..29 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
31..28 0.009 494.5 183.5 0.3234 0.0019 0.0060 1.0 1.1
31..32 0.027 494.5 183.5 0.3234 0.0058 0.0179 2.9 3.3
32..33 0.010 494.5 183.5 0.3234 0.0021 0.0063 1.0 1.2
33..34 0.005 494.5 183.5 0.3234 0.0010 0.0030 0.5 0.5
34..17 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
34..18 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
34..2 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
33..20 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
32..35 0.023 494.5 183.5 0.3234 0.0049 0.0152 2.4 2.8
35..36 0.009 494.5 183.5 0.3234 0.0020 0.0062 1.0 1.1
36..4 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
36..14 0.014 494.5 183.5 0.3234 0.0029 0.0090 1.4 1.6
35..10 0.046 494.5 183.5 0.3234 0.0098 0.0304 4.9 5.6
31..37 0.005 494.5 183.5 0.3234 0.0010 0.0030 0.5 0.5
37..22 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
37..30 0.000 494.5 183.5 0.3234 0.0000 0.0000 0.0 0.0
Time used: 1:27
Model 2: PositiveSelection (3 categories)
TREE # 1: (12, 11, 13, 16, 21, 27, 26, 8, 1, 3, 6, 5, 7, 15, 19, 25, 23, 24, 9, 29, 28, (((17, 18, 2), 20), ((4, 14), 10)), (22, 30)); MP score: 46
check convergence..
lnL(ntime: 36 np: 41): -1251.772405 +0.000000
31..12 31..11 31..13 31..16 31..21 31..27 31..26 31..8 31..1 31..3 31..6 31..5 31..7 31..15 31..19 31..25 31..23 31..24 31..9 31..29 31..28 31..32 32..33 33..34 34..17 34..18 34..2 33..20 32..35 35..36 36..4 36..14 35..10 31..37 37..22 37..30
0.000004 0.004602 0.027939 0.004609 0.018519 0.000004 0.000004 0.004602 0.000004 0.004605 0.000004 0.000004 0.000004 0.004603 0.004616 0.004602 0.000004 0.000004 0.000004 0.000004 0.009230 0.027676 0.009826 0.004587 0.000004 0.000004 0.000004 0.000004 0.023102 0.009908 0.000004 0.013756 0.048037 0.004602 0.000004 0.000004 2.311164 0.979506 0.000000 0.247945 6.654015
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.229493
(12: 0.000004, 11: 0.004602, 13: 0.027939, 16: 0.004609, 21: 0.018519, 27: 0.000004, 26: 0.000004, 8: 0.004602, 1: 0.000004, 3: 0.004605, 6: 0.000004, 5: 0.000004, 7: 0.000004, 15: 0.004603, 19: 0.004616, 25: 0.004602, 23: 0.000004, 24: 0.000004, 9: 0.000004, 29: 0.000004, 28: 0.009230, (((17: 0.000004, 18: 0.000004, 2: 0.000004): 0.004587, 20: 0.000004): 0.009826, ((4: 0.000004, 14: 0.013756): 0.009908, 10: 0.048037): 0.023102): 0.027676, (22: 0.000004, 30: 0.000004): 0.004602);
(C65: 0.000004, C31: 0.004602, C71: 0.027939, C144: 0.004609, C660: 0.018519, C547: 0.000004, C363: 0.000004, C60: 0.004602, C302: 0.000004, C440: 0.004605, C506: 0.000004, C552: 0.000004, C372: 0.000004, C103: 0.004603, C247: 0.004616, C562: 0.004602, C624: 0.000004, C298: 0.000004, C505: 0.000004, C648: 0.000004, C310: 0.009230, (((C168: 0.000004, C117: 0.000004, C126: 0.000004): 0.004587, C130: 0.000004): 0.009826, ((C489: 0.000004, C124: 0.013756): 0.009908, C274: 0.048037): 0.023102): 0.027676, (C180: 0.000004, C337: 0.000004): 0.004602);
Detailed output identifying parameters
kappa (ts/tv) = 2.31116
MLEs of dN/dS (w) for site classes (K=3)
p: 0.97951 0.00000 0.02049
w: 0.24795 1.00000 6.65401
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
31..11 0.005 493.9 184.1 0.3792 0.0011 0.0028 0.5 0.5
31..13 0.028 493.9 184.1 0.3792 0.0064 0.0170 3.2 3.1
31..16 0.005 493.9 184.1 0.3792 0.0011 0.0028 0.5 0.5
31..21 0.019 493.9 184.1 0.3792 0.0043 0.0113 2.1 2.1
31..27 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
31..26 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
31..8 0.005 493.9 184.1 0.3792 0.0011 0.0028 0.5 0.5
31..1 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
31..3 0.005 493.9 184.1 0.3792 0.0011 0.0028 0.5 0.5
31..6 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
31..5 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
31..7 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
31..15 0.005 493.9 184.1 0.3792 0.0011 0.0028 0.5 0.5
31..19 0.005 493.9 184.1 0.3792 0.0011 0.0028 0.5 0.5
31..25 0.005 493.9 184.1 0.3792 0.0011 0.0028 0.5 0.5
31..23 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
31..24 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
31..9 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
31..29 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
31..28 0.009 493.9 184.1 0.3792 0.0021 0.0056 1.1 1.0
31..32 0.028 493.9 184.1 0.3792 0.0064 0.0168 3.2 3.1
32..33 0.010 493.9 184.1 0.3792 0.0023 0.0060 1.1 1.1
33..34 0.005 493.9 184.1 0.3792 0.0011 0.0028 0.5 0.5
34..17 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
34..18 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
34..2 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
33..20 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
32..35 0.023 493.9 184.1 0.3792 0.0053 0.0141 2.6 2.6
35..36 0.010 493.9 184.1 0.3792 0.0023 0.0060 1.1 1.1
36..4 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
36..14 0.014 493.9 184.1 0.3792 0.0032 0.0084 1.6 1.5
35..10 0.048 493.9 184.1 0.3792 0.0111 0.0292 5.5 5.4
31..37 0.005 493.9 184.1 0.3792 0.0011 0.0028 0.5 0.5
37..22 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
37..30 0.000 493.9 184.1 0.3792 0.0000 0.0000 0.0 0.0
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C302)
Pr(w>1) post mean +- SE for w
42 A 0.988* 6.579
188 N 0.861 5.765
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C302)
Pr(w>1) post mean +- SE for w
42 A 0.865 4.386 +- 2.670
188 N 0.730 3.824 +- 2.786
221 K 0.500 2.735 +- 2.738
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 0.319 0.398 0.233 0.046 0.004 0.000 0.000 0.000 0.000 0.000
w2: 0.160 0.154 0.150 0.136 0.115 0.092 0.071 0.053 0.040 0.030
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.006
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.004 0.047
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.005 0.026 0.152
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.002 0.007 0.021 0.072 0.222
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.003 0.010 0.021 0.037 0.098 0.261
sum of density on p0-p1 = 1.000000
Time used: 5:55
Model 7: beta (10 categories)
TREE # 1: (12, 11, 13, 16, 21, 27, 26, 8, 1, 3, 6, 5, 7, 15, 19, 25, 23, 24, 9, 29, 28, (((17, 18, 2), 20), ((4, 14), 10)), (22, 30)); MP score: 46
lnL(ntime: 36 np: 39): -1253.209130 +0.000000
31..12 31..11 31..13 31..16 31..21 31..27 31..26 31..8 31..1 31..3 31..6 31..5 31..7 31..15 31..19 31..25 31..23 31..24 31..9 31..29 31..28 31..32 32..33 33..34 34..17 34..18 34..2 33..20 32..35 35..36 36..4 36..14 35..10 31..37 37..22 37..30
0.000004 0.004551 0.027548 0.004572 0.018297 0.000004 0.000004 0.004574 0.000004 0.004522 0.000004 0.000004 0.000004 0.004553 0.004570 0.004549 0.000004 0.000004 0.000004 0.000004 0.009121 0.027200 0.009631 0.004536 0.000004 0.000004 0.000004 0.000004 0.023120 0.009398 0.000004 0.013636 0.046166 0.004538 0.000004 0.000004 2.239352 0.014773 0.029059
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.225151
(12: 0.000004, 11: 0.004551, 13: 0.027548, 16: 0.004572, 21: 0.018297, 27: 0.000004, 26: 0.000004, 8: 0.004574, 1: 0.000004, 3: 0.004522, 6: 0.000004, 5: 0.000004, 7: 0.000004, 15: 0.004553, 19: 0.004570, 25: 0.004549, 23: 0.000004, 24: 0.000004, 9: 0.000004, 29: 0.000004, 28: 0.009121, (((17: 0.000004, 18: 0.000004, 2: 0.000004): 0.004536, 20: 0.000004): 0.009631, ((4: 0.000004, 14: 0.013636): 0.009398, 10: 0.046166): 0.023120): 0.027200, (22: 0.000004, 30: 0.000004): 0.004538);
(C65: 0.000004, C31: 0.004551, C71: 0.027548, C144: 0.004572, C660: 0.018297, C547: 0.000004, C363: 0.000004, C60: 0.004574, C302: 0.000004, C440: 0.004522, C506: 0.000004, C552: 0.000004, C372: 0.000004, C103: 0.004553, C247: 0.004570, C562: 0.004549, C624: 0.000004, C298: 0.000004, C505: 0.000004, C648: 0.000004, C310: 0.009121, (((C168: 0.000004, C117: 0.000004, C126: 0.000004): 0.004536, C130: 0.000004): 0.009631, ((C489: 0.000004, C124: 0.013636): 0.009398, C274: 0.046166): 0.023120): 0.027200, (C180: 0.000004, C337: 0.000004): 0.004538);
Detailed output identifying parameters
kappa (ts/tv) = 2.23935
Parameters in M7 (beta):
p = 0.01477 q = 0.02906
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.20217 0.99997 1.00000 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
31..11 0.005 494.5 183.5 0.3202 0.0010 0.0030 0.5 0.6
31..13 0.028 494.5 183.5 0.3202 0.0058 0.0182 2.9 3.3
31..16 0.005 494.5 183.5 0.3202 0.0010 0.0030 0.5 0.6
31..21 0.018 494.5 183.5 0.3202 0.0039 0.0121 1.9 2.2
31..27 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
31..26 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
31..8 0.005 494.5 183.5 0.3202 0.0010 0.0030 0.5 0.6
31..1 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
31..3 0.005 494.5 183.5 0.3202 0.0010 0.0030 0.5 0.5
31..6 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
31..5 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
31..7 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
31..15 0.005 494.5 183.5 0.3202 0.0010 0.0030 0.5 0.6
31..19 0.005 494.5 183.5 0.3202 0.0010 0.0030 0.5 0.6
31..25 0.005 494.5 183.5 0.3202 0.0010 0.0030 0.5 0.6
31..23 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
31..24 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
31..9 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
31..29 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
31..28 0.009 494.5 183.5 0.3202 0.0019 0.0060 1.0 1.1
31..32 0.027 494.5 183.5 0.3202 0.0058 0.0180 2.8 3.3
32..33 0.010 494.5 183.5 0.3202 0.0020 0.0064 1.0 1.2
33..34 0.005 494.5 183.5 0.3202 0.0010 0.0030 0.5 0.6
34..17 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
34..18 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
34..2 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
33..20 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
32..35 0.023 494.5 183.5 0.3202 0.0049 0.0153 2.4 2.8
35..36 0.009 494.5 183.5 0.3202 0.0020 0.0062 1.0 1.1
36..4 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
36..14 0.014 494.5 183.5 0.3202 0.0029 0.0090 1.4 1.7
35..10 0.046 494.5 183.5 0.3202 0.0098 0.0305 4.8 5.6
31..37 0.005 494.5 183.5 0.3202 0.0010 0.0030 0.5 0.6
37..22 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
37..30 0.000 494.5 183.5 0.3202 0.0000 0.0000 0.0 0.0
Time used: 17:47
Model 8: beta&w>1 (11 categories)
TREE # 1: (12, 11, 13, 16, 21, 27, 26, 8, 1, 3, 6, 5, 7, 15, 19, 25, 23, 24, 9, 29, 28, (((17, 18, 2), 20), ((4, 14), 10)), (22, 30)); MP score: 46
lnL(ntime: 36 np: 41): -1251.779824 +0.000000
31..12 31..11 31..13 31..16 31..21 31..27 31..26 31..8 31..1 31..3 31..6 31..5 31..7 31..15 31..19 31..25 31..23 31..24 31..9 31..29 31..28 31..32 32..33 33..34 34..17 34..18 34..2 33..20 32..35 35..36 36..4 36..14 35..10 31..37 37..22 37..30
0.000004 0.004601 0.027934 0.004608 0.018516 0.000004 0.000004 0.004532 0.000004 0.004604 0.000004 0.000004 0.000004 0.004602 0.004614 0.004603 0.000004 0.000004 0.000004 0.000004 0.009229 0.027673 0.009827 0.004586 0.000004 0.000004 0.000004 0.000004 0.023092 0.009912 0.000004 0.013756 0.048049 0.004602 0.000004 0.000004 2.339096 0.979982 33.671619 99.000000 6.793456
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.229413
(12: 0.000004, 11: 0.004601, 13: 0.027934, 16: 0.004608, 21: 0.018516, 27: 0.000004, 26: 0.000004, 8: 0.004532, 1: 0.000004, 3: 0.004604, 6: 0.000004, 5: 0.000004, 7: 0.000004, 15: 0.004602, 19: 0.004614, 25: 0.004603, 23: 0.000004, 24: 0.000004, 9: 0.000004, 29: 0.000004, 28: 0.009229, (((17: 0.000004, 18: 0.000004, 2: 0.000004): 0.004586, 20: 0.000004): 0.009827, ((4: 0.000004, 14: 0.013756): 0.009912, 10: 0.048049): 0.023092): 0.027673, (22: 0.000004, 30: 0.000004): 0.004602);
(C65: 0.000004, C31: 0.004601, C71: 0.027934, C144: 0.004608, C660: 0.018516, C547: 0.000004, C363: 0.000004, C60: 0.004532, C302: 0.000004, C440: 0.004604, C506: 0.000004, C552: 0.000004, C372: 0.000004, C103: 0.004602, C247: 0.004614, C562: 0.004603, C624: 0.000004, C298: 0.000004, C505: 0.000004, C648: 0.000004, C310: 0.009229, (((C168: 0.000004, C117: 0.000004, C126: 0.000004): 0.004586, C130: 0.000004): 0.009827, ((C489: 0.000004, C124: 0.013756): 0.009912, C274: 0.048049): 0.023092): 0.027673, (C180: 0.000004, C337: 0.000004): 0.004602);
Detailed output identifying parameters
kappa (ts/tv) = 2.33910
Parameters in M8 (beta&w>1):
p0 = 0.97998 p = 33.67162 q = 99.00000
(p1 = 0.02002) w = 6.79346
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09800 0.09800 0.09800 0.09800 0.09800 0.09800 0.09800 0.09800 0.09800 0.09800 0.02002
w: 0.19404 0.21480 0.22766 0.23819 0.24783 0.25732 0.26730 0.27859 0.29298 0.31779 6.79346
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
31..11 0.005 493.6 184.4 0.3846 0.0011 0.0028 0.5 0.5
31..13 0.028 493.6 184.4 0.3846 0.0065 0.0169 3.2 3.1
31..16 0.005 493.6 184.4 0.3846 0.0011 0.0028 0.5 0.5
31..21 0.019 493.6 184.4 0.3846 0.0043 0.0112 2.1 2.1
31..27 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
31..26 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
31..8 0.005 493.6 184.4 0.3846 0.0011 0.0027 0.5 0.5
31..1 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
31..3 0.005 493.6 184.4 0.3846 0.0011 0.0028 0.5 0.5
31..6 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
31..5 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
31..7 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
31..15 0.005 493.6 184.4 0.3846 0.0011 0.0028 0.5 0.5
31..19 0.005 493.6 184.4 0.3846 0.0011 0.0028 0.5 0.5
31..25 0.005 493.6 184.4 0.3846 0.0011 0.0028 0.5 0.5
31..23 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
31..24 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
31..9 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
31..29 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
31..28 0.009 493.6 184.4 0.3846 0.0021 0.0056 1.1 1.0
31..32 0.028 493.6 184.4 0.3846 0.0064 0.0167 3.2 3.1
32..33 0.010 493.6 184.4 0.3846 0.0023 0.0059 1.1 1.1
33..34 0.005 493.6 184.4 0.3846 0.0011 0.0028 0.5 0.5
34..17 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
34..18 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
34..2 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
33..20 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
32..35 0.023 493.6 184.4 0.3846 0.0054 0.0139 2.6 2.6
35..36 0.010 493.6 184.4 0.3846 0.0023 0.0060 1.1 1.1
36..4 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
36..14 0.014 493.6 184.4 0.3846 0.0032 0.0083 1.6 1.5
35..10 0.048 493.6 184.4 0.3846 0.0112 0.0290 5.5 5.4
31..37 0.005 493.6 184.4 0.3846 0.0011 0.0028 0.5 0.5
37..22 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
37..30 0.000 493.6 184.4 0.3846 0.0000 0.0000 0.0 0.0
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C302)
Pr(w>1) post mean +- SE for w
42 A 0.987* 6.709
188 N 0.854 5.842
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C302)
Pr(w>1) post mean +- SE for w
42 A 0.913 3.828 +- 2.233
188 N 0.801 3.465 +- 2.361
221 K 0.591 2.667 +- 2.426
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.002 0.030 0.143 0.825
p : 0.242 0.316 0.233 0.121 0.052 0.021 0.008 0.003 0.001 0.001
q : 0.001 0.039 0.054 0.066 0.086 0.108 0.129 0.151 0.172 0.194
ws: 0.194 0.189 0.184 0.154 0.110 0.071 0.044 0.027 0.017 0.010
Time used: 30:18
Model 1: NearlyNeutral -1253.190689 Model 2: PositiveSelection -1251.772405 Model 7: beta -1253.209130 Model 8: beta&w>1 -1251.779824 Model 2 vs 1 2.836568 Model 8 vs 7 2.858612
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
