--- EXPERIMENT NOTES
--- EXPERIMENT PROPERTIES
#Sat Dec 10 13:13:20 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/443/zetaCOP-PC/input.fasta
input.names=
mrbayes.params=
codeml.params=
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1328.57 -1345.71
2 -1330.08 -1347.49
--------------------------------------
TOTAL -1329.06 -1346.95
--------------------------------------
Model parameter summaries over the runs sampled in files
"/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.812469 0.017083 0.565368 1.071394 0.803883 1099.72 1135.93 1.000
r(A<->C){all} 0.083050 0.000901 0.029370 0.143340 0.080460 854.59 862.69 1.003
r(A<->G){all} 0.270828 0.004037 0.149900 0.397122 0.265829 671.76 720.90 1.001
r(A<->T){all} 0.173790 0.004304 0.047417 0.298054 0.168000 502.53 586.54 1.003
r(C<->G){all} 0.090911 0.000634 0.042961 0.139420 0.088329 895.41 947.16 1.000
r(C<->T){all} 0.346649 0.003951 0.226859 0.468267 0.343580 669.28 674.70 1.000
r(G<->T){all} 0.034772 0.000495 0.000043 0.078070 0.030445 789.58 896.37 1.001
pi(A){all} 0.246511 0.000347 0.210823 0.283027 0.246598 840.23 974.44 1.002
pi(C){all} 0.295129 0.000386 0.259351 0.335633 0.294347 1219.06 1256.28 1.000
pi(G){all} 0.255968 0.000366 0.217506 0.293281 0.255881 992.63 1172.40 1.001
pi(T){all} 0.202392 0.000304 0.169267 0.236723 0.202540 1034.59 1085.09 1.000
alpha{1,2} 0.088100 0.000351 0.055710 0.128792 0.088032 1116.18 1138.74 1.000
alpha{3} 2.539638 0.687588 1.140779 4.174147 2.406027 1130.41 1242.44 1.000
pinvar{all} 0.540672 0.002673 0.429888 0.631966 0.542966 1029.46 1143.55 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
--- CODEML SUMMARY
Model 1: NearlyNeutral -1131.01823
Model 2: PositiveSelection -1131.01823
Model 0: one-ratio -1143.646376
Model 3: discrete -1130.423813
Model 7: beta -1132.536572
Model 8: beta&w>1 -1132.537981
Model 0 vs 1 25.25629200000003
Model 2 vs 1 0.0
Model 8 vs 7 0.002817999999933818
>C1
MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
LENLEIIMLAFDEICDGGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
QSAREQLKWSILK
>C2
MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
LDNLEIIMLAFDEICDGGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
QSAREQLKWSILK
>C3
MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
LENLEIIMLAFDEICDGGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
QSAREQLKWSILK
>C4
MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
LDNLEIIMLAFDEICDGGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
QSAREQLKWSILK
>C5
MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
LEYLEIIMLAFDEICDGGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
QSAREQLKWSILK
>C6
MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
LENLEIIMLAFDEICDGGIILDADPSSIVKRVDLRNDDIPIAEQTVAQVL
QSAREQLKWSILK
>C7
MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
LENLEIIMLAFDEICDGGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
QSAREQLKWSILK
>C8
MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
LENLEIIMLAFDEICDGGMILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
QSAREQLKWSILK
>C9
MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
LENLEIIMLAFDEICDGGMILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
QSAREQLKWSILK
>C10
MCIMDNDGDRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
LDNLEIIMLAFDEICDGGMILDADPSSVVKRVDLRNDDIPIAEQTVAQVT
ooooooooooooo
>C11
MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
LENLEIIMLAFDEICDGGMILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
QSAREQLKWSILK
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=11, Len=163
C1 MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
C2 MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
C3 MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
C4 MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
C5 MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
C6 MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
C7 MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
C8 MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
C9 MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
C10 MCIMDNDGDRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
C11 MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDG
********:*****************************************
C1 LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
C2 LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
C3 LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
C4 LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
C5 LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
C6 LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
C7 LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
C8 LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
C9 LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
C10 LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
C11 LTCVYKSNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLV
**************************************************
C1 LENLEIIMLAFDEICDGGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
C2 LDNLEIIMLAFDEICDGGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
C3 LENLEIIMLAFDEICDGGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
C4 LDNLEIIMLAFDEICDGGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
C5 LEYLEIIMLAFDEICDGGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
C6 LENLEIIMLAFDEICDGGIILDADPSSIVKRVDLRNDDIPIAEQTVAQVL
C7 LENLEIIMLAFDEICDGGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
C8 LENLEIIMLAFDEICDGGMILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
C9 LENLEIIMLAFDEICDGGMILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
C10 LDNLEIIMLAFDEICDGGMILDADPSSVVKRVDLRNDDIPIAEQTVAQVT
C11 LENLEIIMLAFDEICDGGMILDADPSSVVKRVDLRNDDIPIAEQTVAQVL
*: ***************:********:*********************
C1 QSAREQLKWSILK
C2 QSAREQLKWSILK
C3 QSAREQLKWSILK
C4 QSAREQLKWSILK
C5 QSAREQLKWSILK
C6 QSAREQLKWSILK
C7 QSAREQLKWSILK
C8 QSAREQLKWSILK
C9 QSAREQLKWSILK
C10 ooooooooooooo
C11 QSAREQLKWSILK
PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
-full_log S [0]
-genepred_score S [0] nsd
-run_name S [0]
-mem_mode S [0] mem
-extend D [1] 1
-extend_mode S [0] very_fast_triplet
-max_n_pair D [0] 10
-seq_name_for_quadruplet S [0] all
-compact S [0] default
-clean S [0] no
-do_self FL [0] 0
-do_normalise D [0] 1000
-template_file S [0]
-setenv S [0] 0
-template_mode S [0]
-flip D [0] 0
-remove_template_file D [0] 0
-profile_template_file S [0]
-in S [0]
-seq S [0]
-aln S [0]
-method_limits S [0]
-method S [0]
-lib S [0]
-profile S [0]
-profile1 S [0]
-profile2 S [0]
-pdb S [0]
-relax_lib D [0] 1
-filter_lib D [0] 0
-shrink_lib D [0] 0
-out_lib W_F [0] no
-out_lib_mode S [0] primary
-lib_only D [0] 0
-outseqweight W_F [0] no
-dpa FL [0] 0
-seq_source S [0] ANY
-cosmetic_penalty D [0] 0
-gapopen D [0] 0
-gapext D [0] 0
-fgapopen D [0] 0
-fgapext D [0] 0
-nomatch D [0] 0
-newtree W_F [0] default
-tree W_F [0] NO
-usetree R_F [0]
-tree_mode S [0] nj
-distance_matrix_mode S [0] ktup
-distance_matrix_sim_mode S [0] idmat_sim1
-quicktree FL [0] 0
-outfile W_F [0] default
-maximise FL [1] 1
-output S [1] score_ascii html score_ascii
-len D [0] 0
-infile R_F [1] /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
-matrix S [0] default
-tg_mode D [0] 1
-profile_mode S [0] cw_profile_profile
-profile_comparison S [0] profile
-dp_mode S [0] linked_pair_wise
-ktuple D [0] 1
-ndiag D [0] 0
-diag_threshold D [0] 0
-diag_mode D [0] 0
-sim_matrix S [0] vasiliky
-transform S [0]
-extend_seq FL [0] 0
-outorder S [0] input
-inorder S [0] aligned
-seqnos S [0] off
-case S [0] keep
-cpu D [0] 0
-maxnseq D [0] 1000
-maxlen D [0] -1
-sample_dp D [0] 0
-weight S [0] default
-seq_weight S [0] no
-align FL [1] 1
-mocca FL [0] 0
-domain FL [0] 0
-start D [0] 0
-len D [0] 0
-scale D [0] 0
-mocca_interactive FL [0] 0
-method_evaluate_mode S [0] default
-evaluate_mode S [1] t_coffee_fast
-get_type FL [0] 0
-clean_aln D [0] 0
-clean_threshold D [1] 1
-clean_iteration D [1] 1
-clean_evaluate_mode S [0] t_coffee_fast
-extend_matrix FL [0] 0
-prot_min_sim D [40] 40
-prot_max_sim D [90] 90
-prot_min_cov D [40] 40
-pdb_type S [0] d
-pdb_min_sim D [35] 35
-pdb_max_sim D [100] 100
-pdb_min_cov D [50] 50
-pdb_blast_server W_F [0] EBI
-blast W_F [0]
-blast_server W_F [0] EBI
-pdb_db W_F [0] pdb
-protein_db W_F [0] uniprot
-method_log W_F [0] no
-struc_to_use S [0]
-cache W_F [0] use
-align_pdb_param_file W_F [0] no
-align_pdb_hasch_mode W_F [0] hasch_ca_trace_bubble
-external_aligner S [0] NO
-msa_mode S [0] tree
-master S [0] no
-blast_nseq D [0] 0
-lalign_n_top D [0] 10
-iterate D [1] 0
-trim D [0] 0
-split D [0] 0
-trimfile S [0] default
-split D [0] 0
-split_nseq_thres D [0] 0
-split_score_thres D [0] 0
-check_pdb_status D [0] 0
-clean_seq_name D [0] 0
-seq_to_keep S [0]
-dpa_master_aln S [0]
-dpa_maxnseq D [0] 0
-dpa_min_score1 D [0]
-dpa_min_score2 D [0]
-dpa_keep_tmpfile FL [0] 0
-dpa_debug D [0] 0
-multi_core S [0] templates_jobs_relax_msa_evaluate
-n_core D [0] 0
-max_n_proc D [0] 0
-lib_list S [0]
-prune_lib_mode S [0] 5
-tip S [0] none
-rna_lib S [0]
-no_warning D [0] 0
-run_local_script D [0] 0
-plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 163 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 11 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zetaCOP-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 163 type PROTEIN Struct Unchecked
Input File /opt/ 