--- EXPERIMENT NOTES
--- EXPERIMENT PROPERTIES
#Tue Nov 22 02:30:32 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/3/Ack-PA/input.fasta
input.names=
mrbayes.params=
codeml.params=
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/3/Ack-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/3/Ack-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /opt/ADOPS/3/Ack-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -10394.19 -10409.43
2 -10394.71 -10408.57
--------------------------------------
TOTAL -10394.41 -10409.09
--------------------------------------
Model parameter summaries over the runs sampled in files
"/opt/ADOPS/3/Ack-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/3/Ack-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/3/Ack-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.141372 0.002965 1.034856 1.246587 1.140206 1275.93 1347.84 1.000
r(A<->C){all} 0.093520 0.000126 0.071939 0.116208 0.092957 1034.22 1116.80 1.000
r(A<->G){all} 0.274490 0.000361 0.240038 0.312658 0.274266 958.07 1012.52 1.000
r(A<->T){all} 0.129379 0.000257 0.098117 0.159866 0.128862 932.85 986.69 1.000
r(C<->G){all} 0.035779 0.000032 0.025213 0.047088 0.035508 859.09 1056.67 1.000
r(C<->T){all} 0.400939 0.000491 0.354711 0.442544 0.400289 841.77 925.10 1.000
r(G<->T){all} 0.065894 0.000081 0.048482 0.083365 0.065500 976.77 1110.84 1.003
pi(A){all} 0.218844 0.000044 0.204970 0.230946 0.218806 1090.67 1122.66 1.001
pi(C){all} 0.297181 0.000055 0.282062 0.310687 0.297440 1130.29 1231.39 1.000
pi(G){all} 0.300363 0.000056 0.284931 0.313802 0.300317 1128.44 1165.00 1.000
pi(T){all} 0.183613 0.000036 0.171700 0.195644 0.183427 1064.22 1121.06 1.001
alpha{1,2} 0.110686 0.000054 0.096307 0.124770 0.110599 1296.29 1300.33 1.000
alpha{3} 6.260001 1.546031 4.055834 8.750718 6.139358 1272.85 1386.93 1.000
pinvar{all} 0.291397 0.000601 0.240466 0.336526 0.292311 1285.34 1345.09 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
--- CODEML SUMMARY
Model 1: NearlyNeutral -9494.193974
Model 2: PositiveSelection -9494.193974
Model 0: one-ratio -9541.405711
Model 3: discrete -9472.470172
Model 7: beta -9473.082806
Model 8: beta&w>1 -9473.090303
Model 0 vs 1 94.42347399999926
Model 2 vs 1 0.0
Model 8 vs 7 0.014994000001024688
>C1
MTSTSAVDGGLGSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
SAARESSQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRNLLEQRKVGAAG
DVVMRSSVGNGSSSSPFGFCWGGAAAMANGDDRQRKCASMTNQPHAKERK
STSSKQFAYNKLVNDSATGLQRRNAVKHKGVVVGPQRPPPPQFQQEGILI
DISPDMRPIAEAGTGGAKGAGDSSSLQADSSFCILDAPIDVPTYAGSSGS
GDLNVSPTYYNEQPQFDFDPAKMTASPGRLQPPPYQMPPTYSNTMEFVQK
RDLHQQQLATPVRERDPFDTTNVETTVALYSNFNQSLEAASPPAPIYNSP
SVRKSLFGGSKSNKENIPALESAAMQLNLSNLTLERHDATCIQPVEPVPA
PPGDGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKDMVYKQN
LTPLKNGAAPGSVHSNHSSPSSTASPKQNNVEAAAAAAATTQSVVNRIWY
EQVASTQSEYYAQPPTEQAEEQIYQNHRHQQQQQQELNHSFVAISNRVVA
PKNNAYSSTASLYDAVAASTAGSTYYGQVPNGSGAVLYDEVTQDDYLRPT
RPAPLAPPPLSAQQIQRRMEKMRLQQQQQLDGAHQLYAPVPSDYGREQEK
LQQLMQELGSSAVEQDVRNALRAASGDVGLATRHYKIDQLARLGVAGRPQ
CEQALQQTNWSLEVAAELLLNAGooo
>C2
MTSTSAVDGGLGSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
SAARESSQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRSLLEQRKVGAAG
DVAMRSSVGNGSTSSPFGFCWGGAAAMVNGDDRQRKCASMTNQPHAKERK
STSSKQFAYNKLVNDSATGLQRRNAVKHKGVVVGPQRPPPPQFQQEGILI
DISPDMRPIAEGGTGGAKGAGDSSSLQADSSFCILDAPIDVPTYAGSSGS
GDLNVSPTYYNEQPQFDFDPAKVTASPGRLQPPPYQMPPTYSNTMEFVQK
RDLHQQQLATLVRERDPFDTTNGETAVALYSNFNQSLEAAPPPAPIYNSP
SVRKSLFGGSKSNKENIPALESAAMQLNLSNLALERHDVICNQPVEPVPA
PPADGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKDMVYKQN
LTPLKNGAAPGSVHSNHSSPSSTASPKQNNVEAAAAAAATTQSVVNRIWY
EQVASTQSEYYAQPPPEQAEEQIYQNHHQQQQELNHSFVAISNRVVAPKN
NAYSSTASLYDAVAGSTMGSTYYGQVPNGSGAVLYDEVTQDDYLRPTRPA
PLAPPPLSAQQIQRRMEKMRLQQQQQLDGAHQLYAPVPSDYGREQEKLQQ
LMQELGSSAVEQDVRNALRAASGDVGLATRHYKIDQLARLGVAGRPQCEQ
ALQQTNWSLEVAAELLLNAGoooooo
>C3
MTSTSAVDGGLGSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
SAARESSQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRSLLEQRKVGAAG
DVAMRSSVGNGSTSSPFGFCWGGAAAMVNGDDRQRKCASMTNQPHAKERK
STSSKQFAYNKLVNDSATGLQRRNAVKHKGVVVGPQRPPPPQFQQEGILI
DISPDMRPIAEGGTGGAKGAGDSSSLQADSSFCILDAPIDVPTYAGSSGS
GDLNVSPTYYNEQPQFDFDPAKVTASPGRLQPPPYQMPPTYSNTMEFVQK
QNLHQQQLATPVRERDPFDTTNVETAVALYSNFNQSLEAAPPPAPIYNSP
SVRKSLFGGSKSNKENIPALESAAMQLNLSNLALERHDAICSQPVEPVPA
PPADGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKDMVYKQN
LTPLKNGAAPGSVHSNHSSPSSIASPKQNNVEAAAAAAATTQSVVNRIWY
EQVASTQSEYYAQPPPEQAEEQIYQNHHQQQQQELNHSFVAISNRVVAPK
NNAYSSTASLYDAVAGSTVGSTYYGQVPNGSGAVLYDEVTQDDYLRPTRP
APLAPPPLSAQQIQRRMEKMRLQQQQQLDGAHQLYAPVPSDYGREQEKLQ
QLMQELGSSAVEQDVRNALRAASGDVGLATRHYKIDQLARLGVAGRPQCE
QALQQTNWSLEVAAELLLNAGooooo
>C4
MTSTSAVDGGLSSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
SAARESSQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRSLLEQRKVGAAG
DVVMRSSVGNGSPSSPFGFCWGGAAAMANGDDRQRKCASMTNQSHAKERK
STSSKQFAYNKLVNEAAAGLHRRNAVKHKGAVGGPQRPPPPQFQQEGILI
DISPDMRPIAEGGAGAGAQGAGDSSSLQADSSFCILDAPIDVPTYAGSSG
SGDLNVSPTYYNEQPQFDFDPANVTASPGRLQPPPYQMPPTYSNTMEFVQ
KRDLQQQQLATPVRERDPFDTTNIETAVALYSNFNHSLEAAPPTAPIYNS
PSVRKSLFGGSNSNKENIPALESAAMQLNLSNLALERHETISSQPVEPDP
APPADGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKDVVYKQ
NLTPLKNGVAPGSGHSNHSSPSSTASPKQNNVEAAAAAAATTQSVVNRIW
YEQVASTQSEYYAQPPPEQAEEQIYQNHHQQQELNHSFVAISNRVVAPKN
NAYSSTASLYDAVAASTAGSTYYGQVPNGSGAVLYDEVTQDDYLRPTRPA
PLAPPPLSAQQIQRRMEKMRLQQQQQLDGAHQLYAPVPSDYGREQEKLQQ
LLQELGSSAVEQDVRNALRAASGDVGLATRHYKIDQLARLGVAGRPQCEQ
ALQQTNWSLEVAAELLLNAGoooooo
>C5
MTSTSVVDGGLSSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
SSARESSQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
MITELAERGSLLDTLRKQCRHTSLTVIWNWSVQIVTGMAYLEQKRFLHRD
LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRNLLEQRKVGAAG
DVLMRTSVGNGSTSSPFGFCWGGAAAMANGEDRQRKCASLTNQPHAKERK
STSSKQFAYNKLVNEAAAGLHRRNAVKHKGAVVGPQRPPPPQFQQEGILI
DISPDMRPIAEGGADGPKGAGDSSSLQADSSFCILDAPIDVPTYAGSSGS
GDLNVSPTYYNEQPQFDFDPANVTASPGRLQPPPYQMPPTYSNTMEFVQK
RDLQQQQLATPVRERDPFDTTNVETAVALYSNFNHSLEAATPPAPIYNSP
SVRKSLFGGSNSNKENIPALESAAMQLNLSNLALERHDITTISSQPVEPV
PAPPADGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKDIVYK
QNLTPLKNGVTPGSVHSNHSSPSSTASPKQNNVEAAAAAAATTQSVVNRI
WYEQVASTQSEYYAQPPPEQAEEQIYQNHHQQQQQELNHSFVAISNRVVA
PKNNAYSSTASLYDAVAASTAGSTYYGQVPNGSGAVLYDEVTQDDYLRPT
RPAPLAPPPLSAQQIQRRMEKMRLQQQQQLDGAHQLYAPVPSDYGREQEK
LQQLMQELGNSAVEQDVRNALRAASGDVGLATRHYKIDQLARLGVAARPQ
CEQALQQTNWSLEVAAELLLNAGooo
>C6
MTSTSAVDGGQSSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
PEDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
SSARESTQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHPNLVRLYGVVLSQPMM
MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPKSLLEQRKVGAAG
DVVMRSSMSNGSSSSPFGFCWGGAAAMANGEDRQRKTASLTSQAHAKERK
STSSKQFAYNKLVNEAAAAGLHRRNAVKHKGAVVGPQRPPPPQFQQEGIL
IDISPDMRPSAGGGVEGAGDSSSLQADSSFCLLDAPIDVPTYAGSSGSGE
LNVSPTYYNEQPQFDFDPASMTASPGRLQPPPYQMPPTYSNTMEFVQKRD
LHQQQLATPVRERDPFDTTNLETAVAIYSNFNNSLEAAPPPAPIYNSPSV
RKSLFGGSNSNKENIPALESAAMQLNLNNLALERHDTLSIQPMEPIPAPA
TDGVLLDKSFIAELEKDMYSNGQNRAHEEYQRNSTQMYSSKDMVYKQNLT
PLKNGSGHSNHSSPSSTASPKQNNLEAAAAAAATTQSVVNRIWYEQVAST
SSEYYAQPPPEQPDEQIYQNHHQQPQQESNHSFVAISNRVVAPKNSVYSS
SASLYDAVAASTAGSTYYGQVPNGSGAVRYDEVTQDDYLRPTRPAPLAPP
PLSAQQIQRRMEKMRLQQQQELEGAHQLYAPVPSDYGREQEKLQQLMQEL
GSSAVEQDVRNALRAASGDVGLATRHYKIDQLARLGVAGRPQCEQALQQT
NWSLEVAAELLLoooooooooooooo
>C7
MTSISAVDGGHSSETAWLEDLMREVQLEQFLDRIRDDLQVTRLAHFDYVL
PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
SARESNQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPTGKVI
PVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHPNLVRLYGVVLSQPMMM
ITELAERGSLLDTLRKQCRYTSLTIIWNWSVQIVTGMAYLEQKRFLHRDL
ACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESLR
FRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQP
DACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHESK
GLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRSLLEQRKVGAAGD
VAMRSSMGNGSSSSPFGFCWGGAAAMANGDDRQKKCSSMTTQAHAKERKS
TSSKQFAYNKLVNEAAAAAGLHRRNAVKHKGAVVGPQRPPPPQFQQEGIL
IDISPDMRPLSGSGGGAAEGSAESSSLQADSSFCLLDAPIDVPTYAESSG
SGELNVSPTYYNEQPQFDFDPANMTASPGRLQPPPYQMPPTYSNTMEFVQ
KRDLQQQKLVTPVRERDPFDTTNLETAVAIYSNFNQSLEAAPPPAPVYNS
PSVRKSLFGGSNSNKENIPALESAAMQLNLSNLAMERHDTISIQHVDPVP
APPADGVLLDKSFIAELEKDMYSNGQNRTQEEYQRNSTQMYATKDMVYKQ
NLTPLKNGAGSAHSNHSSPSSTASPKQNNVEAAGNRSSTNLSVVNRIWYE
QEASTPSEYYAQPPPEHPDEQIYQNHHQQQQESNHSFVAISNRIVAPKTN
VYSSSAALYDAVAASTAGSTYYGQVPNSGGGVRYDEVTQDDYLRPTRPAP
LAPPPLSAQQIQRRMDKMRLQQQQELEGAHQLYAPVPSDYGREQEKLQQL
MQELGSSAVEQDVRNALRAASGDVPLAMRHYKIDQLARLGVAGRPQCEQA
LQQTNWSLEVAAEFLLoooooooooo
>C8
MTSISTTDGGHSSETAWLEDLLQEVQLEQFLDRIRDDLQVTRLAHFDYVL
PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
SSARESGQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRSLLEQRKVAAAG
DVVMRSSMGNGSSSSPFGFCWGGAAAMANGEDRQRKCASMANQAHAKERK
STSSKQFAYNKLVNEAAAAAGLQRRNAVKHKGPVVGPQRPPPPQFQQEGI
LIDISPDMRPLPGGGGGAKAEGAGDSSSLQADSSFCILDAPIDVPTYAGS
SGSGELNVSPTYFNEQPQFDFDPANVTASPGRLQPPPYQMPPTYSNTMEF
VQKRDLHQQQLATPVRERDPFDTTNLETAVALYSNFNQSLEAVPPPAPIY
TSPSVRKSLFGGPNSNKENIPALESAAMQLNLSNLALERRDTVATMGSQP
MEPLPAPPADGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKD
MVYKQNLTPLKNGVAAGAGHSNHSSPSSTASPKQNNLEAAAAAAVATTQS
VVNRIWYEQVASTPSEYYAQPPPEEQIYQNHHHQQQQLQQESNHSFVAIS
NRVVVAPKNTAYASAGSLYDAVAASTAGSTYYGQVPNGTGAVLYDEVTHD
DYLRPTRPAPLAPPPLSAQQIQRRMDKMRLQQQQQLEGAHQLYAPVPSDY
GREQEKLQQLMQELGSSAVEQDVRNALRAASGDVALATRHYKIDQLARLG
VAGRPQCEQALQQTNWSLEVAAEFLL
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=8, Len=1093
C1 MTSTSAVDGGLGSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
C2 MTSTSAVDGGLGSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
C3 MTSTSAVDGGLGSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
C4 MTSTSAVDGGLSSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
C5 MTSTSVVDGGLSSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
C6 MTSTSAVDGGQSSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
C7 MTSISAVDGGHSSETAWLEDLMREVQLEQFLDRIRDDLQVTRLAHFDYVL
C8 MTSISTTDGGHSSETAWLEDLLQEVQLEQFLDRIRDDLQVTRLAHFDYVL
*** *..*** .*********::***************************
C1 PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
C2 PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
C3 PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
C4 PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
C5 PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
C6 PEDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
C7 PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
C8 PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
*:************************************************
C1 SAARESSQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
C2 SAARESSQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
C3 SAARESSQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
C4 SAARESSQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
C5 SSARESSQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
C6 SSARESTQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
C7 S-ARESNQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPTGKV
C8 SSARESGQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
* **** ***************************************:***
C1 IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
C2 IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
C3 IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
C4 IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
C5 IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
C6 IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHPNLVRLYGVVLSQPMM
C7 IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHPNLVRLYGVVLSQPMM
C8 IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
**********************************.***************
C1 MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
C2 MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
C3 MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
C4 MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
C5 MITELAERGSLLDTLRKQCRHTSLTVIWNWSVQIVTGMAYLEQKRFLHRD
C6 MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
C7 MITELAERGSLLDTLRKQCRYTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
C8 MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
********************:****:************************
C1 LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
C2 LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
C3 LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
C4 LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
C5 LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
C6 LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
C7 LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
C8 LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
**************************************************
C1 RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
C2 RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
C3 RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
C4 RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
C5 RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
C6 RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
C7 RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
C8 RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
**************************************************
C1 PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
C2 PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
C3 PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
C4 PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
C5 PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
C6 PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
C7 PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
C8 PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
**************************************************
C1 KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRNLLEQRKVGAAG
C2 KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRSLLEQRKVGAAG
C3 KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRSLLEQRKVGAAG
C4 KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRSLLEQRKVGAAG
C5 KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRNLLEQRKVGAAG
C6 KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPKSLLEQRKVGAAG
C7 KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRSLLEQRKVGAAG
C8 KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRSLLEQRKVAAAG
*************************************:.*******.***
C1 DVVMRSSVGNGSSSSPFGFCWGGAAAMANGDDRQRKCASMTNQPHAKERK
C2 DVAMRSSVGNGSTSSPFGFCWGGAAAMVNGDDRQRKCASMTNQPHAKERK
C3 DVAMRSSVGNGSTSSPFGFCWGGAAAMVNGDDRQRKCASMTNQPHAKERK
C4 DVVMRSSVGNGSPSSPFGFCWGGAAAMANGDDRQRKCASMTNQSHAKERK
C5 DVLMRTSVGNGSTSSPFGFCWGGAAAMANGEDRQRKCASLTNQPHAKERK
C6 DVVMRSSMSNGSSSSPFGFCWGGAAAMANGEDRQRKTASLTSQAHAKERK
C7 DVAMRSSMGNGSSSSPFGFCWGGAAAMANGDDRQKKCSSMTTQAHAKERK
C8 DVVMRSSMGNGSSSSPFGFCWGGAAAMANGEDRQRKCASMANQAHAKERK
** **:*:.***.**************.**:***:* :*::.*.******
C1 STSSKQFAYNKLVNDS--ATGLQRRNAVKHKGVVVGPQRPPPPQFQQEGI
C2 STSSKQFAYNKLVNDS--ATGLQRRNAVKHKGVVVGPQRPPPPQFQQEGI
C3 STSSKQFAYNKLVNDS--ATGLQRRNAVKHKGVVVGPQRPPPPQFQQEGI
C4 STSSKQFAYNKLVNEA--AAGLHRRNAVKHKGAVGGPQRPPPPQFQQEGI
C5 STSSKQFAYNKLVNEA--AAGLHRRNAVKHKGAVVGPQRPPPPQFQQEGI
C6 STSSKQFAYNKLVNEAA-AAGLHRRNAVKHKGAVVGPQRPPPPQFQQEGI
C7 STSSKQFAYNKLVNEAAAAAGLHRRNAVKHKGAVVGPQRPPPPQFQQEGI
C8 STSSKQFAYNKLVNEAAAAAGLQRRNAVKHKGPVVGPQRPPPPQFQQEGI
**************:: *:**:********* * ***************
C1 LIDISPDMRPIAEAGT-GGAKGAGDSSSLQADSSFCILDAPIDVPTYAGS
C2 LIDISPDMRPIAEGGT-GGAKGAGDSSSLQADSSFCILDAPIDVPTYAGS
C3 LIDISPDMRPIAEGGT-GGAKGAGDSSSLQADSSFCILDAPIDVPTYAGS
C4 LIDISPDMRPIAEGGAGAGAQGAGDSSSLQADSSFCILDAPIDVPTYAGS
C5 LIDISPDMRPIAEGGA-DGPKGAGDSSSLQADSSFCILDAPIDVPTYAGS
C6 LIDISPDMRPSAGGGV----EGAGDSSSLQADSSFCLLDAPIDVPTYAGS
C7 LIDISPDMRPLSGSGG-GAAEGSAESSSLQADSSFCLLDAPIDVPTYAES
C8 LIDISPDMRPLPGGGGGAKAEGAGDSSSLQADSSFCILDAPIDVPTYAGS
********** . .* :*:.:***********:*********** *
C1 SGSGDLNVSPTYYNEQPQFDFDPAKMTASPGRLQPPPYQMPPTYSNTMEF
C2 SGSGDLNVSPTYYNEQPQFDFDPAKVTASPGRLQPPPYQMPPTYSNTMEF
C3 SGSGDLNVSPTYYNEQPQFDFDPAKVTASPGRLQPPPYQMPPTYSNTMEF
C4 SGSGDLNVSPTYYNEQPQFDFDPANVTASPGRLQPPPYQMPPTYSNTMEF
C5 SGSGDLNVSPTYYNEQPQFDFDPANVTASPGRLQPPPYQMPPTYSNTMEF
C6 SGSGELNVSPTYYNEQPQFDFDPASMTASPGRLQPPPYQMPPTYSNTMEF
C7 SGSGELNVSPTYYNEQPQFDFDPANMTASPGRLQPPPYQMPPTYSNTMEF
C8 SGSGELNVSPTYFNEQPQFDFDPANVTASPGRLQPPPYQMPPTYSNTMEF
****:*******:***********.:************************
C1 VQKRDLHQQQLATPVRERDPFDTTNVETTVALYSNFNQSLEAASPPAPIY
C2 VQKRDLHQQQLATLVRERDPFDTTNGETAVALYSNFNQSLEAAPPPAPIY
C3 VQKQNLHQQQLATPVRERDPFDTTNVETAVALYSNFNQSLEAAPPPAPIY
C4 VQKRDLQQQQLATPVRERDPFDTTNIETAVALYSNFNHSLEAAPPTAPIY
C5 VQKRDLQQQQLATPVRERDPFDTTNVETAVALYSNFNHSLEAATPPAPIY
C6 VQKRDLHQQQLATPVRERDPFDTTNLETAVAIYSNFNNSLEAAPPPAPIY
C7 VQKRDLQQQKLVTPVRERDPFDTTNLETAVAIYSNFNQSLEAAPPPAPVY
C8 VQKRDLHQQQLATPVRERDPFDTTNLETAVALYSNFNQSLEAVPPPAPIY
***::*:**:*.* *********** **:**:*****:****..*.**:*
C1 NSPSVRKSLFGGSKSNKENIPALESAAMQLNLSNLTLERHD---ATCIQP
C2 NSPSVRKSLFGGSKSNKENIPALESAAMQLNLSNLALERHD---VICNQP
C3 NSPSVRKSLFGGSKSNKENIPALESAAMQLNLSNLALERHD---AICSQP
C4 NSPSVRKSLFGGSNSNKENIPALESAAMQLNLSNLALERH---ETISSQP
C5 NSPSVRKSLFGGSNSNKENIPALESAAMQLNLSNLALERHDI-TTISSQP
C6 NSPSVRKSLFGGSNSNKENIPALESAAMQLNLNNLALERHD---TLSIQP
C7 NSPSVRKSLFGGSNSNKENIPALESAAMQLNLSNLAMERHD---TISIQH
C8 TSPSVRKSLFGGPNSNKENIPALESAAMQLNLSNLALERRDTVATMGSQP
.***********.:******************.**::**: . *
C1 VEPVPAPPGDGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKD
C2 VEPVPAPPADGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKD
C3 VEPVPAPPADGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKD
C4 VEPDPAPPADGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKD
C5 VEPVPAPPADGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKD
C6 MEPIPAPATDGVLLDKSFIAELEKDMYSNGQNRAHEEYQRNSTQMYSSKD
C7 VDPVPAPPADGVLLDKSFIAELEKDMYSNGQNRTQEEYQRNSTQMYATKD
C8 MEPLPAPPADGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKD
::* ***. ************************::***********::**
C1 MVYKQNLTPLKNGAAPGSVHSNHSSPSSTASPKQNNVEAAAAAA-ATTQS
C2 MVYKQNLTPLKNGAAPGSVHSNHSSPSSTASPKQNNVEAAAAAA-ATTQS
C3 MVYKQNLTPLKNGAAPGSVHSNHSSPSSIASPKQNNVEAAAAAA-ATTQS
C4 VVYKQNLTPLKNGVAPGSGHSNHSSPSSTASPKQNNVEAAAAAA-ATTQS
C5 IVYKQNLTPLKNGVTPGSVHSNHSSPSSTASPKQNNVEAAAAAA-ATTQS
C6 MVYKQNLTPLKN----GSGHSNHSSPSSTASPKQNNLEAAAAAA-ATTQS
C7 MVYKQNLTPLKNG--AGSAHSNHSSPSSTASPKQNNVEAAGNRS-STNLS
C8 MVYKQNLTPLKNGVAAGAGHSNHSSPSSTASPKQNNLEAAAAAAVATTQS
:*********** *: ********* *******:***. : :*. *
C1 VVNRIWYEQVASTQSEYYAQPPTEQAEEQIYQNHRHQQQQQQ-ELNHSFV
C2 VVNRIWYEQVASTQSEYYAQPPPEQAEEQIYQN--HHQQQQ--ELNHSFV
C3 VVNRIWYEQVASTQSEYYAQPPPEQAEEQIYQN--HHQQQQQ-ELNHSFV
C4 VVNRIWYEQVASTQSEYYAQPPPEQAEEQIYQN--HHQQQ---ELNHSFV
C5 VVNRIWYEQVASTQSEYYAQPPPEQAEEQIYQN--HHQQQQQ-ELNHSFV
C6 VVNRIWYEQVASTSSEYYAQPPPEQPDEQIYQN--HHQQPQQ-ESNHSFV
C7 VVNRIWYEQEASTPSEYYAQPPPEHPDEQIYQN--HHQQQQ--ESNHSFV
C8 VVNRIWYEQVASTPSEYYAQPPPE---EQIYQNHHHQQQQLQQESNHSFV
********* *** ********.* ****** *:** * *****
C1 AISNR-VVAPKNNAYSSTASLYDAVAASTAGSTYYGQVPNGSGAVLYDEV
C2 AISNR-VVAPKNNAYSSTASLYDAVAGSTMGSTYYGQVPNGSGAVLYDEV
C3 AISNR-VVAPKNNAYSSTASLYDAVAGSTVGSTYYGQVPNGSGAVLYDEV
C4 AISNR-VVAPKNNAYSSTASLYDAVAASTAGSTYYGQVPNGSGAVLYDEV
C5 AISNR-VVAPKNNAYSSTASLYDAVAASTAGSTYYGQVPNGSGAVLYDEV
C6 AISNR-VVAPKNSVYSSSASLYDAVAASTAGSTYYGQVPNGSGAVRYDEV
C7 AISNR-IVAPKTNVYSSSAALYDAVAASTAGSTYYGQVPNSGGGVRYDEV
C8 AISNRVVVAPKNTAYASAGSLYDAVAASTAGSTYYGQVPNGTGAVLYDEV
***** :****...*:*:.:******.** **********. *.* ****
C1 TQDDYLRPTRPAPLAPPPLSAQQIQRRMEKMRLQQQQQLDGAHQLYAPVP
C2 TQDDYLRPTRPAPLAPPPLSAQQIQRRMEKMRLQQQQQLDGAHQLYAPVP
C3 TQDDYLRPTRPAPLAPPPLSAQQIQRRMEKMRLQQQQQLDGAHQLYAPVP
C4 TQDDYLRPTRPAPLAPPPLSAQQIQRRMEKMRLQQQQQLDGAHQLYAPVP
C5 TQDDYLRPTRPAPLAPPPLSAQQIQRRMEKMRLQQQQQLDGAHQLYAPVP
C6 TQDDYLRPTRPAPLAPPPLSAQQIQRRMEKMRLQQQQELEGAHQLYAPVP
C7 TQDDYLRPTRPAPLAPPPLSAQQIQRRMDKMRLQQQQELEGAHQLYAPVP
C8 THDDYLRPTRPAPLAPPPLSAQQIQRRMDKMRLQQQQQLEGAHQLYAPVP
*:**************************:********:*:**********
C1 SDYGREQEKLQQLMQELGSSAVEQDVRNALRAASGDVGLATRHYKIDQLA
C2 SDYGREQEKLQQLMQELGSSAVEQDVRNALRAASGDVGLATRHYKIDQLA
C3 SDYGREQEKLQQLMQELGSSAVEQDVRNALRAASGDVGLATRHYKIDQLA
C4 SDYGREQEKLQQLLQELGSSAVEQDVRNALRAASGDVGLATRHYKIDQLA
C5 SDYGREQEKLQQLMQELGNSAVEQDVRNALRAASGDVGLATRHYKIDQLA
C6 SDYGREQEKLQQLMQELGSSAVEQDVRNALRAASGDVGLATRHYKIDQLA
C7 SDYGREQEKLQQLMQELGSSAVEQDVRNALRAASGDVPLAMRHYKIDQLA
C8 SDYGREQEKLQQLMQELGSSAVEQDVRNALRAASGDVALATRHYKIDQLA
*************:****.****************** ** *********
C1 RLGVAGRPQCEQALQQTNWSLEVAAELLLNAGooo--------
C2 RLGVAGRPQCEQALQQTNWSLEVAAELLLNAGoooooo-----
C3 RLGVAGRPQCEQALQQTNWSLEVAAELLLNAGooooo------
C4 RLGVAGRPQCEQALQQTNWSLEVAAELLLNAGoooooo-----
C5 RLGVAARPQCEQALQQTNWSLEVAAELLLNAGooo--------
C6 RLGVAGRPQCEQALQQTNWSLEVAAELLLoooooooooooooo
C7 RLGVAGRPQCEQALQQTNWSLEVAAEFLLoooooooooo----
C8 RLGVAGRPQCEQALQQTNWSLEVAAEFLL--------------
*****.********************:**
PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
-full_log S [0]
-genepred_score S [0] nsd
-run_name S [0]
-mem_mode S [0] mem
-extend D [1] 1
-extend_mode S [0] very_fast_triplet
-max_n_pair D [0] 10
-seq_name_for_quadruplet S [0] all
-compact S [0] default
-clean S [0] no
-do_self FL [0] 0
-do_normalise D [0] 1000
-template_file S [0]
-setenv S [0] 0
-template_mode S [0]
-flip D [0] 0
-remove_template_file D [0] 0
-profile_template_file S [0]
-in S [0]
-seq S [0]
-aln S [0]
-method_limits S [0]
-method S [0]
-lib S [0]
-profile S [0]
-profile1 S [0]
-profile2 S [0]
-pdb S [0]
-relax_lib D [0] 1
-filter_lib D [0] 0
-shrink_lib D [0] 0
-out_lib W_F [0] no
-out_lib_mode S [0] primary
-lib_only D [0] 0
-outseqweight W_F [0] no
-dpa FL [0] 0
-seq_source S [0] ANY
-cosmetic_penalty D [0] 0
-gapopen D [0] 0
-gapext D [0] 0
-fgapopen D [0] 0
-fgapext D [0] 0
-nomatch D [0] 0
-newtree W_F [0] default
-tree W_F [0] NO
-usetree R_F [0]
-tree_mode S [0] nj
-distance_matrix_mode S [0] ktup
-distance_matrix_sim_mode S [0] idmat_sim1
-quicktree FL [0] 0
-outfile W_F [0] default
-maximise FL [1] 1
-output S [1] score_ascii html score_ascii
-len D [0] 0
-infile R_F [1] /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
-matrix S [0] default
-tg_mode D [0] 1
-profile_mode S [0] cw_profile_profile
-profile_comparison S [0] profile
-dp_mode S [0] linked_pair_wise
-ktuple D [0] 1
-ndiag D [0] 0
-diag_threshold D [0] 0
-diag_mode D [0] 0
-sim_matrix S [0] vasiliky
-transform S [0]
-extend_seq FL [0] 0
-outorder S [0] input
-inorder S [0] aligned
-seqnos S [0] off
-case S [0] keep
-cpu D [0] 0
-maxnseq D [0] 1000
-maxlen D [0] -1
-sample_dp D [0] 0
-weight S [0] default
-seq_weight S [0] no
-align FL [1] 1
-mocca FL [0] 0
-domain FL [0] 0
-start D [0] 0
-len D [0] 0
-scale D [0] 0
-mocca_interactive FL [0] 0
-method_evaluate_mode S [0] default
-evaluate_mode S [1] t_coffee_fast
-get_type FL [0] 0
-clean_aln D [0] 0
-clean_threshold D [1] 1
-clean_iteration D [1] 1
-clean_evaluate_mode S [0] t_coffee_fast
-extend_matrix FL [0] 0
-prot_min_sim D [40] 40
-prot_max_sim D [90] 90
-prot_min_cov D [40] 40
-pdb_type S [0] d
-pdb_min_sim D [35] 35
-pdb_max_sim D [100] 100
-pdb_min_cov D [50] 50
-pdb_blast_server W_F [0] EBI
-blast W_F [0]
-blast_server W_F [0] EBI
-pdb_db W_F [0] pdb
-protein_db W_F [0] uniprot
-method_log W_F [0] no
-struc_to_use S [0]
-cache W_F [0] use
-align_pdb_param_file W_F [0] no
-align_pdb_hasch_mode W_F [0] hasch_ca_trace_bubble
-external_aligner S [0] NO
-msa_mode S [0] tree
-master S [0] no
-blast_nseq D [0] 0
-lalign_n_top D [0] 10
-iterate D [1] 0
-trim D [0] 0
-split D [0] 0
-trimfile S [0] default
-split D [0] 0
-split_nseq_thres D [0] 0
-split_score_thres D [0] 0
-check_pdb_status D [0] 0
-clean_seq_name D [0] 0
-seq_to_keep S [0]
-dpa_master_aln S [0]
-dpa_maxnseq D [0] 0
-dpa_min_score1 D [0]
-dpa_min_score2 D [0]
-dpa_keep_tmpfile FL [0] 0
-dpa_debug D [0] 0
-multi_core S [0] templates_jobs_relax_msa_evaluate
-n_core D [0] 0
-max_n_proc D [0] 0
-lib_list S [0]
-prune_lib_mode S [0] 5
-tip S [0] none
-rna_lib S [0]
-no_warning D [0] 0
-run_local_script D [0] 0
-plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
s S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [64202]
Library Relaxation: Multi_proc [72]
s S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [64202]
Library Relaxation: Multi_proc [72]
s S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 8 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1076 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 1076 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/3/Ack-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [64202]
Library Relaxation: Multi_proc [72]
s S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0 