--- EXPERIMENT NOTES
--- EXPERIMENT PROPERTIES
#Mon Oct 31 10:03:50 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/111/CG31368-PC/input.fasta
input.names=
mrbayes.params=
codeml.params=
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/111/CG31368-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/111/CG31368-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /opt/ADOPS/111/CG31368-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -12345.62 -12360.00
2 -12345.87 -12360.99
--------------------------------------
TOTAL -12345.74 -12360.61
--------------------------------------
Model parameter summaries over the runs sampled in files
"/opt/ADOPS/111/CG31368-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/111/CG31368-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/111/CG31368-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.673360 0.001010 0.611757 0.735615 0.672041 1149.94 1296.53 1.000
r(A<->C){all} 0.061829 0.000070 0.047315 0.079265 0.061442 1120.07 1218.91 1.000
r(A<->G){all} 0.270948 0.000322 0.235603 0.305607 0.270363 720.28 806.17 1.000
r(A<->T){all} 0.089034 0.000120 0.068376 0.110390 0.088809 970.04 1068.46 1.000
r(C<->G){all} 0.059363 0.000052 0.046438 0.074670 0.059144 980.14 1094.36 1.000
r(C<->T){all} 0.454686 0.000433 0.411272 0.493846 0.454600 844.73 927.17 1.001
r(G<->T){all} 0.064141 0.000071 0.047254 0.079988 0.063927 994.48 1057.23 1.000
pi(A){all} 0.253109 0.000038 0.241033 0.265103 0.253152 958.13 1147.09 1.001
pi(C){all} 0.260984 0.000036 0.248914 0.272244 0.260811 1011.10 1089.11 1.000
pi(G){all} 0.271549 0.000041 0.259081 0.283569 0.271645 1065.24 1067.08 1.000
pi(T){all} 0.214358 0.000031 0.203862 0.225402 0.214350 1190.26 1327.72 1.000
alpha{1,2} 0.057864 0.000750 0.004660 0.098167 0.065008 811.79 919.84 1.000
alpha{3} 6.551354 1.730500 4.262738 9.241560 6.446833 1166.94 1247.53 1.001
pinvar{all} 0.293410 0.000896 0.235704 0.352235 0.292862 870.65 1051.71 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
--- CODEML SUMMARY
Model 1: NearlyNeutral -11492.959322
Model 2: PositiveSelection -11492.409807
Model 0: one-ratio -11580.086072
Model 3: discrete -11486.143946
Model 7: beta -11490.242809
Model 8: beta&w>1 -11486.398201
Model 0 vs 1 174.2534999999989
Model 2 vs 1 1.0990300000012212
Model 8 vs 7 7.689215999998851
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_melanogaster_CG31368-PC)
Pr(w>1) post mean +- SE for w
784 E 0.549 1.232
787 T 0.868 1.739
789 S 0.544 1.221
791 L 0.634 1.366
965 S 0.631 1.362
1414 S 0.992** 1.935
1464 I 0.519 1.182
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_melanogaster_CG31368-PC)
Pr(w>1) post mean +- SE for w
8 R 0.666 1.146 +- 0.520
19 T 0.534 0.979 +- 0.584
23 S 0.538 0.986 +- 0.580
257 P 0.595 1.052 +- 0.566
778 P 0.731 1.236 +- 0.450
782 P 0.802 1.310 +- 0.395
784 E 0.836 1.350 +- 0.349
787 T 0.932 1.442 +- 0.222
789 S 0.836 1.345 +- 0.361
791 L 0.865 1.374 +- 0.329
965 S 0.866 1.380 +- 0.314
969 G 0.567 1.053 +- 0.532
1009 I 0.791 1.299 +- 0.405
1414 S 0.982* 1.486 +- 0.105
1459 G 0.719 1.223 +- 0.459
1464 I 0.829 1.339 +- 0.365
1465 E 0.560 1.010 +- 0.577
1472 K 0.801 1.309 +- 0.395
>C1
MKRRSQTRAEQAVPPAKTTKENSGSLTVSQLSSDVIWQLASQYWTPDTKA
DHLPYSAKIIERIYNEEIGDGGGHSARRINMLEFSQYLEQYLWPHYQRET
ATHAHLMSIVIMANEKFRERVEVWTVFEKLPDQYPAFFRHVLESCLPSKK
AKEASSTLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
REQELREVPEWRKYWKRLLKKEKDSKPEVLWERHFMQNLIIDFLHILESI
PAEGEVPRNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
PEEVVSPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
ENVVPSEYYSGDSCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
EDAVSRMLPWKSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFVP
QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLQGENRCYRVWLDSNQYR
LDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
LHDILLGYGDPGAAHYSNMPNQERSLEFNDTFMDYNHLEASFPQYNLKCE
VPVENRQPPFRLIFEDVPIQKESDGEDPEEKPEEKLTKSILVQPYKYEAR
GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
SNIYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
TEKDYSRYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNAYTCETAGYFYL
YNVMARWEKFQSQISVHKGEADAEKLRAEFEKEFPFGKFFADAPQPLFKG
ANYDELMDIACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
GQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGFVHDYQLINVED
FKGVGESEPNPYFYQNLAEAEYIVAVYMYMRLLGYPAAKISILTTYNGQK
HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKAVGHL
RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPEDK
FPTDRLASAAVASQDIKTVENMSEMAQFVYERYMAKMEELKGTLPSEEEL
EAMRNQLLQEDEESVPEASEEPPEKRAAKEEPLSKKKTTEAFKPTPILNE
INVDDTEMGQREQIEEEATDQDKTQESAPAEESooo
>C2
MKRRSQTRAEQAVPPAKTTKEKSGALTVAQLSSDVIWQLASQYWTPDTKA
DHLPYSAKIIERIYNEEIGDGGGHSARRINMLEFSQYLEQYLWPHYQRET
ATHAHLMSIVIMANEKFRERVEVWTVFEKLPDQYPPFFRHVLESCLPSKK
AKEASSTLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
REQELREVPEWRKYWKRLLKKEKDSKPEVLWERHFMQNLIIDFLHILESI
PAEGEVPRNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
PEEVVSPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
ENVVPSEYYSGESCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
EDAVSRMLPWKSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFVP
QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLQGENRCYRVWLDSNQYR
LDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
LHDILLGYGDPGAAHYSNMPNQERSLEFNDTFLDYNHLEDSFPKYNLKCE
VPEENRQPPFRLIFEDVPIQKESDGEDPEDNSEMELTKSILVQPYKYEAR
GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
SNIYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
TEKDYSRYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNAYTCETAGYFYL
YNVMARWEKFQSQISVHKQEADVEKLRAEFEKEFPFGKFFADAPQPLFKS
ANYDELMDTACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
GQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGFVHDYQLINVED
FKGVGESEPNPYFYQNLAEAEYIVAVYMYMRLLGYPAAKISILTTYNGQK
HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNNYILISLVRTKAVGHL
RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPEDK
YPTDRLASADVASQDIKTVENMSEMAQLVYERYMAKMEELKGTLPSEEEL
EEMRNQLLQEDEEYVPEASEEPPEKRAAKEEPLSKKKTTEAFKPTPILNE
INVDDTEMAQREQIEQEATATTTQDKTQESAPPEES
>C3
MKRRSQTRAEQAVPPAKTIKEKSGALTVAQLSSDVIWQLASQYWTPDTKA
DHLPYSAKIIERIYNEEIGDGGGHSARRINMLEFSQYLEQYLWPHYQRET
ATHAHLMSIVIMANEKFRERVEVWTVFEKLPDQYPAFFRHVLESCLPSKK
AKEASSTLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
REQELREVPEWRKYWKRLLKKEKGSKPEVLWERHFMQNLIIDFLHILESI
PAEGEVPRNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
PEEVVSPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
ENVVPSEYYSGESCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
EDAVSRMLPWKSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFVP
QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLQGENRCYRVWLDSNQYR
LDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
LHDILLGYGDPGAAHYSNMPNQERSLEFNDTFLDYNHLEASFPKYNLKCE
VPEENRQPPFRLIFEDVPIQKESDGEDPEENSEMELTKSILVQPYKYEAR
GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
SNIYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
TEKDYSRYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNAYTCETAGYFYL
YNVMARWEKFQSQISVHKQEADVEKLRAEFEKEFPFGKFFADAPQPLFKG
ANYDELMDIACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
GQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGFVHDYQLINVED
FKGVGESEPNPYFYQNLAEAEYIVAVYTYMRLLGYPAAKISILTTYNGQK
HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKAVGHL
RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPEDK
YPTDRLASADVSSQDIKTVENMSEMAQFVYERYMAKMKELKGTLPSEEEL
EEMRNQLLQEDEEYVPEASQEPPEKRAAKEEPLSKKKTTEAFKPTPILNE
INVDDTEMAQREQVEQEATATTTQDKTQESAPPEES
>C4
MKRRSQTKAQQAAPPAKTTKEKSGSLTVAQLSSDVIWQLASQYWTPDTKA
DHLPYSAKIIERIYKEEIGDGGAHSARRINMLEFSQYLEQYLWPHYQRET
ATHAHLMSIVIMANEKFRERVEVWTVFEKLPDQYPAFFHHVLESCLPSKK
AKEASSTLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
REQELREVPEWRKYWKRLLKKEKDSKPEVLWERHFMQNLIIDFLHILESI
PAEGAVASNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
PEEVVSPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
ENVVPSEYYSGESCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
EDAVSRMLPWQSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFIP
QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLQGENRCYRVWLDSNQYR
LDMDDLQERADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
LHDILLGYGDPGAAHYSNMPNQERSLEFNDTFLDFHHLKASFPNYNLKCE
VPEENRQPPFRLIFEDVPIQTESDGEDHEEKPEEELAKSILVQPYKYEAR
GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
SNIYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
TEKDYSRYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNAYTCETAGYFYL
YNVMARWEKFQSQIAVHKEDTDAEKLRAEFEREFPFGKFFADAPQPLFKG
ASYEELMDIACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
GQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGFAHDYQLINVED
FKGVGESEPNPYFYQNLAEAEYIVAVYMYMRLLGYPAAKISILTTYNGQK
HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKAVGHL
RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPEDK
YPTDRLASADVASQDIKTVDNMSEMAQFVYERYMAKMEELKGTLPSEEEL
QAMRNQLPQEDGEIVPEEASEEPPEKRAAKEEPLSKKKTTEVFKPTPILN
EINVDDTDMAEREQIQQEATDEDKTQESAPTEESoo
>C5
MKRRSQTRAQQAVPPTKATKEKSGSLTVAQLSSDVIWQLASQYWTPDTKA
DHLPYSAKIIERIYKEEIGDGGGHSARRINMLEFSQYLEQYLWPHYQRET
ATHAHLMSIVIMANEKFRERVEVWTVFEKLPEQYPAFFRHVLESCLPSKK
AKEASSTLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
REQELREVPEWRKYWKRLLKKEKDSKPEVLWERHFMQNLIIDFLHILESI
PAEGDVASNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
PEEVVSPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
ENVVPSEYYSGESCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
EDAVSRMLPWQSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFIP
QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLQGENRCYRVWLDSNQYR
LDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
LHDILLGYGDPGAAHYSNMPNQERSLEFNDTFLDYNHLEASFPNYNLKCE
VPEENRQPPFRLIFEDVPIEKESDGEDHEETPEGELTKSILVQPYKYEAR
GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
SNIYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
TEKDYSRYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNAYTCETAGYFYL
YNVMARWEKFQSQICVHEEETDAGKLRAEFEKEFPFGKFFADAPQPLFKG
ANYDELMDIACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
GQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGFVHDYQLINVED
FKGVGESEPNPYFYQNLAEAEYIVAVYMYMRLLGYPAAKISILTTYNGQK
HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKAVGHL
RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPEDK
YPTDRLASADVASQDMRTVENMSEMAQFVYERYMAKMEELKDTLPSEEEL
QAMRNQLPQEDEEDVPEEASEEPPEKRAAKEEPLSKKKTTEAFKPTPILN
EINVDDTEMTQREEIQQEATDEDQTQESAPAEESoo
>C6
MKRRSQTQAQQAAPAAKNAKEKAGALTVAQLNSDVIWQLASQYWTPDTKA
DHKPYSAQIIERIYNEEIGGGGAHSARRINMLEFSQYLEQYLWPHYQRET
ATHAHLMSIVIMANEKFKERVEVWSVFEKLPDQYPAFFRHVLESCLPGKK
AKEASSSLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
REQELREVPEWRKYWKRLLKKEKDSKPEVVWERHFMQNLIIDFLHILESI
PAEGEVASNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
PEEVAAPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
ENVVPSEYYSGDSCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
EDAVSRMLPWQSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYNHREPFIP
QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLPGEQRCYRVWLDSNQYR
QDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
LHDILLGYGDPGAAHYSNMSNQERSLEFNDTFLDYKHLEASFPNYTLKCE
VPEEKRQPPYRLIFKDVPIHKDSDEEEGEEKVEQELSKTIEVQPYKYEAR
GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
SNIYHNHPSQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
TEKDYSRYGRVNYVLAKRVDLLSQVQKLQESLGVSGDNAYTCETAGYFYL
YNVMARWEKFQSQMRAHRDETDVEKLRAVFEKDFPFAKFFADAPQPLFKG
ANYEELMDVACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
GQGRARASICSLYKWRYKKLEDLQHIFERDEYKKANPGFAHDYQLINVED
FKGVGESEPNPYFYQNLAEAEYIVAVYTYMRLLGYPAAKISILTTYNGQK
HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKVVGHL
RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPDDK
YPTERLASADVATESIKVVENMSEMAQFVYERYMAKMEELKGTLPTEEEL
LAMRSQLPQEDDDVVPEEASEEPPEKRAAKEVPVSKKKTTEAFKPTPILN
EISVDEAEMDQREETVKETTEEPAQVPTPAEESooo
>C7
MKRRSQTQAQQAAPASKNAKEKAGALTVAQLNSDVIWQLASQYWTPDTKA
DHLPYSAKIIERIYNEEIGGGGGHSARRINMLEFSQYLEQYLWPHYQRET
ATHAHLMSIVIMANEKFKERVEVWTVFEKLPDQYPAFFRHVLESCLPGKK
AKEASSSLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
REQELRDVPEWRKYWKRLLKKEKDSNPEVVWERHFMQNLIIDFLHILESI
PAEGEVSSNLVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
PEEVAAPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
ENVVPSEYYSGDSCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
EDAVSRMLPWQSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFIP
QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLPGEQRCYRVWLDSNQYR
QDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
LHDILLGYGDPGAAHYSNMSNQERSLEFNDTFLDYKHLEASFPNYKLKCE
VPEEKRQPPYRLIFEDVPIHKDSDEEEGEEKVEQELLKVISVQPYKYEAR
GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
SNIYHNHPSQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
TEKDYSRYGRVNYVLAKRVDLLSQVQKLQESLGVSGDNAYTCETAGYFYL
YNVMARWEKFQSQMSVHREETDVEKLRALFEKDFPFGKFFADAPQPLFKG
GNYEELMDAACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
GQGRARASICSLYKWRYKKLEDLQHIFERDEYKKANPGFAHDYQLINVED
FKGVGESEPNPYFYQNLAEAEYIVAVYTYMRLMGYPAAKISILTTYNGQK
HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKVVGHL
RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPDDK
YPTDRLANADVARDAIKVVENMSEMAQFVYERYMAKMEELKGTLPTEEEL
QAMRNQLPQEDEDNVPEEASEEPPEKRVAKEAPLSKKKTAEAFKPTPILN
EISVDEVEMDQKEEVEKETTEEPTKVPTPAEESooo
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=7, Len=1490
C1 MKRRSQTRAEQAVPPAKTTKENSGSLTVSQLSSDVIWQLASQYWTPDTKA
C2 MKRRSQTRAEQAVPPAKTTKEKSGALTVAQLSSDVIWQLASQYWTPDTKA
C3 MKRRSQTRAEQAVPPAKTIKEKSGALTVAQLSSDVIWQLASQYWTPDTKA
C4 MKRRSQTKAQQAAPPAKTTKEKSGSLTVAQLSSDVIWQLASQYWTPDTKA
C5 MKRRSQTRAQQAVPPTKATKEKSGSLTVAQLSSDVIWQLASQYWTPDTKA
C6 MKRRSQTQAQQAAPAAKNAKEKAGALTVAQLNSDVIWQLASQYWTPDTKA
C7 MKRRSQTQAQQAAPASKNAKEKAGALTVAQLNSDVIWQLASQYWTPDTKA
*******:*:**.*.:* **::*:***:**.******************
C1 DHLPYSAKIIERIYNEEIGDGGGHSARRINMLEFSQYLEQYLWPHYQRET
C2 DHLPYSAKIIERIYNEEIGDGGGHSARRINMLEFSQYLEQYLWPHYQRET
C3 DHLPYSAKIIERIYNEEIGDGGGHSARRINMLEFSQYLEQYLWPHYQRET
C4 DHLPYSAKIIERIYKEEIGDGGAHSARRINMLEFSQYLEQYLWPHYQRET
C5 DHLPYSAKIIERIYKEEIGDGGGHSARRINMLEFSQYLEQYLWPHYQRET
C6 DHKPYSAQIIERIYNEEIGGGGAHSARRINMLEFSQYLEQYLWPHYQRET
C7 DHLPYSAKIIERIYNEEIGGGGGHSARRINMLEFSQYLEQYLWPHYQRET
** ****:******:****.**.***************************
C1 ATHAHLMSIVIMANEKFRERVEVWTVFEKLPDQYPAFFRHVLESCLPSKK
C2 ATHAHLMSIVIMANEKFRERVEVWTVFEKLPDQYPPFFRHVLESCLPSKK
C3 ATHAHLMSIVIMANEKFRERVEVWTVFEKLPDQYPAFFRHVLESCLPSKK
C4 ATHAHLMSIVIMANEKFRERVEVWTVFEKLPDQYPAFFHHVLESCLPSKK
C5 ATHAHLMSIVIMANEKFRERVEVWTVFEKLPEQYPAFFRHVLESCLPSKK
C6 ATHAHLMSIVIMANEKFKERVEVWSVFEKLPDQYPAFFRHVLESCLPGKK
C7 ATHAHLMSIVIMANEKFKERVEVWTVFEKLPDQYPAFFRHVLESCLPGKK
*****************:******:******:***.**:********.**
C1 AKEASSTLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
C2 AKEASSTLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
C3 AKEASSTLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
C4 AKEASSTLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
C5 AKEASSTLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
C6 AKEASSSLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
C7 AKEASSSLRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRR
******:*******************************************
C1 REQELREVPEWRKYWKRLLKKEKDSKPEVLWERHFMQNLIIDFLHILESI
C2 REQELREVPEWRKYWKRLLKKEKDSKPEVLWERHFMQNLIIDFLHILESI
C3 REQELREVPEWRKYWKRLLKKEKGSKPEVLWERHFMQNLIIDFLHILESI
C4 REQELREVPEWRKYWKRLLKKEKDSKPEVLWERHFMQNLIIDFLHILESI
C5 REQELREVPEWRKYWKRLLKKEKDSKPEVLWERHFMQNLIIDFLHILESI
C6 REQELREVPEWRKYWKRLLKKEKDSKPEVVWERHFMQNLIIDFLHILESI
C7 REQELRDVPEWRKYWKRLLKKEKDSNPEVVWERHFMQNLIIDFLHILESI
******:****************.*:***:********************
C1 PAEGEVPRNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
C2 PAEGEVPRNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
C3 PAEGEVPRNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
C4 PAEGAVASNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
C5 PAEGDVASNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
C6 PAEGEVASNVVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
C7 PAEGEVSSNLVHYCERFLEFIIDLEALLPTRRFFNTVLDDCHLIVRALLS
**** *. *:****************************************
C1 PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
C2 PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
C3 PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
C4 PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
C5 PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
C6 PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
C7 PLVRREEGKLFGQLLDMLKFYTRFEINDVTGSSLTDHDMTQLHYKKITSL
**************************************************
C1 QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
C2 QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
C3 QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
C4 QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
C5 QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
C6 QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
C7 QRAVFAKFPSLRVFALSNVATVDNRESLEQHFGGLDGKGLLQIATFLNLV
**************************************************
C1 PEEVVSPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
C2 PEEVVSPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
C3 PEEVVSPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
C4 PEEVVSPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
C5 PEEVVSPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
C6 PEEVAAPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
C7 PEEVAAPLDWHRVDEQFLRELLITRHERRCSQLEALNEMPLYPTEQIIWD
****.:********************************************
C1 ENVVPSEYYSGDSCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
C2 ENVVPSEYYSGESCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
C3 ENVVPSEYYSGESCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
C4 ENVVPSEYYSGESCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
C5 ENVVPSEYYSGESCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
C6 ENVVPSEYYSGDSCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
C7 ENVVPSEYYSGDSCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDI
***********:**************************************
C1 EDAVSRMLPWKSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
C2 EDAVSRMLPWKSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
C3 EDAVSRMLPWKSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
C4 EDAVSRMLPWQSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
C5 EDAVSRMLPWQSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
C6 EDAVSRMLPWQSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
C7 EDAVSRMLPWQSEDGDVVFGGWARMALPIASFAVVEVAKPHLGEKKPSRV
**********:***************************************
C1 RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFVP
C2 RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFVP
C3 RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFVP
C4 RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFIP
C5 RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFIP
C6 RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYNHREPFIP
C7 RADVGVTLSVRREIKAEWENLRKHDVCFLITVKPTQPYGTKYKHREPFIP
******************************************:*****:*
C1 QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLQGENRCYRVWLDSNQYR
C2 QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLQGENRCYRVWLDSNQYR
C3 QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLQGENRCYRVWLDSNQYR
C4 QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLQGENRCYRVWLDSNQYR
C5 QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLQGENRCYRVWLDSNQYR
C6 QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLPGEQRCYRVWLDSNQYR
C7 QVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLPGEQRCYRVWLDSNQYR
********************************* **:*************
C1 LDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
C2 LDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
C3 LDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
C4 LDMDDLQERADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
C5 LDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
C6 QDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
C7 QDMDDLQEGADDVYESFNILMRRKPKENNFKAVLETIRHLMNTECVVPPW
******* *****************************************
C1 LHDILLGYGDPGAAHYSNMPNQERSLEFNDTFMDYNHLEASFPQYNLKCE
C2 LHDILLGYGDPGAAHYSNMPNQERSLEFNDTFLDYNHLEDSFPKYNLKCE
C3 LHDILLGYGDPGAAHYSNMPNQERSLEFNDTFLDYNHLEASFPKYNLKCE
C4 LHDILLGYGDPGAAHYSNMPNQERSLEFNDTFLDFHHLKASFPNYNLKCE
C5 LHDILLGYGDPGAAHYSNMPNQERSLEFNDTFLDYNHLEASFPNYNLKCE
C6 LHDILLGYGDPGAAHYSNMSNQERSLEFNDTFLDYKHLEASFPNYTLKCE
C7 LHDILLGYGDPGAAHYSNMSNQERSLEFNDTFLDYKHLEASFPNYKLKCE
*******************.************:*::**: ***:*.****
C1 VPVENRQPPFRLIFEDVPIQKESDGEDPEEKPEEKLTKSILVQPYKYEAR
C2 VPEENRQPPFRLIFEDVPIQKESDGEDPEDNSEMELTKSILVQPYKYEAR
C3 VPEENRQPPFRLIFEDVPIQKESDGEDPEENSEMELTKSILVQPYKYEAR
C4 VPEENRQPPFRLIFEDVPIQTESDGEDHEEKPEEELAKSILVQPYKYEAR
C5 VPEENRQPPFRLIFEDVPIEKESDGEDHEETPEGELTKSILVQPYKYEAR
C6 VPEEKRQPPYRLIFKDVPIHKDSDEEEGEEKVEQELSKTIEVQPYKYEAR
C7 VPEEKRQPPYRLIFEDVPIHKDSDEEEGEEKVEQELLKVISVQPYKYEAR
** *:****:****:****..:** *: *:. * :* * * *********
C1 GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
C2 GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
C3 GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
C4 GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
C5 GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
C6 GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
C7 GPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQII
**************************************************
C1 SNIYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
C2 SNIYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
C3 SNIYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
C4 SNIYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
C5 SNIYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
C6 SNIYHNHPSQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
C7 SNIYHNHPSQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE
********.*****************************************
C1 TEKDYSRYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNAYTCETAGYFYL
C2 TEKDYSRYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNAYTCETAGYFYL
C3 TEKDYSRYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNAYTCETAGYFYL
C4 TEKDYSRYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNAYTCETAGYFYL
C5 TEKDYSRYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNAYTCETAGYFYL
C6 TEKDYSRYGRVNYVLAKRVDLLSQVQKLQESLGVSGDNAYTCETAGYFYL
C7 TEKDYSRYGRVNYVLAKRVDLLSQVQKLQESLGVSGDNAYTCETAGYFYL
******************:***********:*******************
C1 YNVMARWEKFQSQISVHKGEADAEKLRAEFEKEFPFGKFFADAPQPLFKG
C2 YNVMARWEKFQSQISVHKQEADVEKLRAEFEKEFPFGKFFADAPQPLFKS
C3 YNVMARWEKFQSQISVHKQEADVEKLRAEFEKEFPFGKFFADAPQPLFKG
C4 YNVMARWEKFQSQIAVHKEDTDAEKLRAEFEREFPFGKFFADAPQPLFKG
C5 YNVMARWEKFQSQICVHEEETDAGKLRAEFEKEFPFGKFFADAPQPLFKG
C6 YNVMARWEKFQSQMRAHRDETDVEKLRAVFEKDFPFAKFFADAPQPLFKG
C7 YNVMARWEKFQSQMSVHREETDVEKLRALFEKDFPFGKFFADAPQPLFKG
*************: .*. ::*. **** **::***.************.
C1 ANYDELMDIACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
C2 ANYDELMDTACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
C3 ANYDELMDIACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
C4 ASYEELMDIACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
C5 ANYDELMDIACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
C6 ANYEELMDVACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
C7 GNYEELMDAACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKI
..*:**** *****************************************
C1 IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
C2 IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
C3 IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
C4 IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
C5 IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
C6 IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
C7 IAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDG
**************************************************
C1 LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
C2 LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
C3 LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
C4 LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
C5 LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
C6 LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
C7 LNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLD
**************************************************
C1 GQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGFVHDYQLINVED
C2 GQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGFVHDYQLINVED
C3 GQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGFVHDYQLINVED
C4 GQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGFAHDYQLINVED
C5 GQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGFVHDYQLINVED
C6 GQGRARASICSLYKWRYKKLEDLQHIFERDEYKKANPGFAHDYQLINVED
C7 GQGRARASICSLYKWRYKKLEDLQHIFERDEYKKANPGFAHDYQLINVED
*********************************:*****.**********
C1 FKGVGESEPNPYFYQNLAEAEYIVAVYMYMRLLGYPAAKISILTTYNGQK
C2 FKGVGESEPNPYFYQNLAEAEYIVAVYMYMRLLGYPAAKISILTTYNGQK
C3 FKGVGESEPNPYFYQNLAEAEYIVAVYTYMRLLGYPAAKISILTTYNGQK
C4 FKGVGESEPNPYFYQNLAEAEYIVAVYMYMRLLGYPAAKISILTTYNGQK
C5 FKGVGESEPNPYFYQNLAEAEYIVAVYMYMRLLGYPAAKISILTTYNGQK
C6 FKGVGESEPNPYFYQNLAEAEYIVAVYTYMRLLGYPAAKISILTTYNGQK
C7 FKGVGESEPNPYFYQNLAEAEYIVAVYTYMRLMGYPAAKISILTTYNGQK
*************************** ****:*****************
C1 HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKAVGHL
C2 HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNNYILISLVRTKAVGHL
C3 HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKAVGHL
C4 HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKAVGHL
C5 HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKAVGHL
C6 HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKVVGHL
C7 HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKVVGHL
**********************************:**********.****
C1 RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPEDK
C2 RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPEDK
C3 RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPEDK
C4 RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPEDK
C5 RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPEDK
C6 RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPDDK
C7 RDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLRPLKLSLVPDDK
***********************************************:**
C1 FPTDRLASAAVASQDIKTVENMSEMAQFVYERYMAKMEELKGTLPSEEEL
C2 YPTDRLASADVASQDIKTVENMSEMAQLVYERYMAKMEELKGTLPSEEEL
C3 YPTDRLASADVSSQDIKTVENMSEMAQFVYERYMAKMKELKGTLPSEEEL
C4 YPTDRLASADVASQDIKTVDNMSEMAQFVYERYMAKMEELKGTLPSEEEL
C5 YPTDRLASADVASQDMRTVENMSEMAQFVYERYMAKMEELKDTLPSEEEL
C6 YPTERLASADVATESIKVVENMSEMAQFVYERYMAKMEELKGTLPTEEEL
C7 YPTDRLANADVARDAIKVVENMSEMAQFVYERYMAKMEELKGTLPTEEEL
:**:***.* *: : ::.*:*******:*********:***.***:****
C1 EAMRNQLLQEDEESVP-EASEEPPEKRAAKEEPLSKKKTTEAFKPTPILN
C2 EEMRNQLLQEDEEYVP-EASEEPPEKRAAKEEPLSKKKTTEAFKPTPILN
C3 EEMRNQLLQEDEEYVP-EASQEPPEKRAAKEEPLSKKKTTEAFKPTPILN
C4 QAMRNQLPQEDGEIVPEEASEEPPEKRAAKEEPLSKKKTTEVFKPTPILN
C5 QAMRNQLPQEDEEDVPEEASEEPPEKRAAKEEPLSKKKTTEAFKPTPILN
C6 LAMRSQLPQEDDDVVPEEASEEPPEKRAAKEVPVSKKKTTEAFKPTPILN
C7 QAMRNQLPQEDEDNVPEEASEEPPEKRVAKEAPLSKKKTAEAFKPTPILN
**.** *** : ** ***:******.*** *:*****:*.********
C1 EINVDDTEMGQREQIEEEATD---QDKTQESAPAEESooo
C2 EINVDDTEMAQREQIEQEATATTTQDKTQESAPPEES---
C3 EINVDDTEMAQREQVEQEATATTTQDKTQESAPPEES---
C4 EINVDDTDMAEREQIQQEATD---EDKTQESAPTEESoo-
C5 EINVDDTEMTQREEIQQEATD---EDQTQESAPAEESoo-
C6 EISVDEAEMDQREETVKETTE----EPAQVPTPAEESooo
C7 EISVDEVEMDQKEEVEKETTE----EPTKVPTPAEESooo
**.**:.:* ::*: :*:* : :: .:*.***
PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
-full_log S [0]
-genepred_score S [0] nsd
-run_name S [0]
-mem_mode S [0] mem
-extend D [1] 1
-extend_mode S [0] very_fast_triplet
-max_n_pair D [0] 10
-seq_name_for_quadruplet S [0] all
-compact S [0] default
-clean S [0] no
-do_self FL [0] 0
-do_normalise D [0] 1000
-template_file S [0]
-setenv S [0] 0
-template_mode S [0]
-flip D [0] 0
-remove_template_file D [0] 0
-profile_template_file S [0]
-in S [0]
-seq S [0]
-aln S [0]
-method_limits S [0]
-method S [0]
-lib S [0]
-profile S [0]
-profile1 S [0]
-profile2 S [0]
-pdb S [0]
-relax_lib D [0] 1
-filter_lib D [0] 0
-shrink_lib D [0] 0
-out_lib W_F [0] no
-out_lib_mode S [0] primary
-lib_only D [0] 0
-outseqweight W_F [0] no
-dpa FL [0] 0
-seq_source S [0] ANY
-cosmetic_penalty D [0] 0
-gapopen D [0] 0
-gapext D [0] 0
-fgapopen D [0] 0
-fgapext D [0] 0
-nomatch D [0] 0
-newtree W_F [0] default
-tree W_F [0] NO
-usetree R_F [0]
-tree_mode S [0] nj
-distance_matrix_mode S [0] ktup
-distance_matrix_sim_mode S [0] idmat_sim1
-quicktree FL [0] 0
-outfile W_F [0] default
-maximise FL [1] 1
-output S [1] score_ascii html score_ascii
-len D [0] 0
-infile R_F [1] /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
-matrix S [0] default
-tg_mode D [0] 1
-profile_mode S [0] cw_profile_profile
-profile_comparison S [0] profile
-dp_mode S [0] linked_pair_wise
-ktuple D [0] 1
-ndiag D [0] 0
-diag_threshold D [0] 0
-diag_mode D [0] 0
-sim_matrix S [0] vasiliky
-transform S [0]
-extend_seq FL [0] 0
-outorder S [0] input
-inorder S [0] aligned
-seqnos S [0] off
-case S [0] keep
-cpu D [0] 0
-maxnseq D [0] 1000
-maxlen D [0] -1
-sample_dp D [0] 0
-weight S [0] default
-seq_weight S [0] no
-align FL [1] 1
-mocca FL [0] 0
-domain FL [0] 0
-start D [0] 0
-len D [0] 0
-scale D [0] 0
-mocca_interactive FL [0] 0
-method_evaluate_mode S [0] default
-evaluate_mode S [1] t_coffee_fast
-get_type FL [0] 0
-clean_aln D [0] 0
-clean_threshold D [1] 1
-clean_iteration D [1] 1
-clean_evaluate_mode S [0] t_coffee_fast
-extend_matrix FL [0] 0
-prot_min_sim D [40] 40
-prot_max_sim D [90] 90
-prot_min_cov D [40] 40
-pdb_type S [0] d
-pdb_min_sim D [35] 35
-pdb_max_sim D [100] 100
-pdb_min_cov D [50] 50
-pdb_blast_server W_F [0] EBI
-blast W_F [0]
-blast_server W_F [0] EBI
-pdb_db W_F [0] pdb
-protein_db W_F [0] uniprot
-method_log W_F [0] no
-struc_to_use S [0]
-cache W_F [0] use
-align_pdb_param_file W_F [0] no
-align_pdb_hasch_mode W_F [0] hasch_ca_trace_bubble
-external_aligner S [0] NO
-msa_mode S [0] tree
-master S [0] no
-blast_nseq D [0] 0
-lalign_n_top D [0] 10
-iterate D [1] 0
-trim D [0] 0
-split D [0] 0
-trimfile S [0] default
-split D [0] 0
-split_nseq_thres D [0] 0
-split_score_thres D [0] 0
-check_pdb_status D [0] 0
-clean_seq_name D [0] 0
-seq_to_keep S [0]
-dpa_master_aln S [0]
-dpa_maxnseq D [0] 0
-dpa_min_score1 D [0]
-dpa_min_score2 D [0]
-dpa_keep_tmpfile FL [0] 0
-dpa_debug D [0] 0
-multi_core S [0] templates_jobs_relax_msa_evaluate
-n_core D [0] 0
-max_n_proc D [0] 0
-lib_list S [0]
-prune_lib_mode S [0] 5
-tip S [0] none
-rna_lib S [0]
-no_warning D [0] 0
-run_local_script D [0] 0
-plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [63542]
Library Relaxation: Multi_proc [72]
plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [63542]
Library Relaxation: Multi_proc [72]
plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [63542]
Library Relaxation: Multi_proc [72]
plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [63542]
Library Relaxation: Multi_proc [72]
plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [63542]
Library Relaxation: Multi_proc [72]
plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [63542]
Library Relaxation: Multi_proc [72]
plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1486 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 1486 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/111/CG31368-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [63542]
Library Relaxation: Multi_proc [72]
plugins 