--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -15571.10 -15598.31
2 -15571.38 -15596.57
--------------------------------------
TOTAL -15571.23 -15597.78
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.090827 0.001757 1.012343 1.176116 1.089734 989.02 1113.31 1.001
r(A<->C){all} 0.103327 0.000099 0.082622 0.121730 0.103066 891.68 971.08 1.000
r(A<->G){all} 0.242266 0.000201 0.215695 0.271192 0.242080 796.70 874.71 1.000
r(A<->T){all} 0.098081 0.000054 0.084104 0.112617 0.098015 855.04 1011.40 1.000
r(C<->G){all} 0.097609 0.000110 0.076370 0.117394 0.097388 894.56 900.75 1.003
r(C<->T){all} 0.383838 0.000270 0.353583 0.416466 0.383375 720.36 729.61 1.004
r(G<->T){all} 0.074878 0.000049 0.061372 0.088897 0.074648 920.87 936.25 1.000
pi(A){all} 0.270152 0.000038 0.258140 0.282535 0.270304 880.00 939.35 1.000
pi(C){all} 0.188353 0.000027 0.177999 0.198071 0.188436 757.56 938.75 1.000
pi(G){all} 0.211911 0.000033 0.200834 0.223135 0.211806 835.23 896.75 1.000
pi(T){all} 0.329585 0.000042 0.317325 0.342110 0.329685 860.01 959.89 1.000
alpha{1,2} 0.236396 0.000297 0.202015 0.268031 0.235597 941.85 1046.96 1.000
alpha{3} 7.182201 3.631339 3.936879 10.918100 6.945162 1264.42 1319.31 1.000
pinvar{all} 0.294658 0.000565 0.244762 0.338321 0.295349 1193.34 1238.51 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
-- Starting log on Wed Nov 02 20:11:33 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.11 sec, SCORE=1000, Nseq=17, Len=1378
C1 MLFV-FLTLLPSCLGYIGDFRCINRVNTSISNARAPCVSTEVVDVSKGLG
C2 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C3 MLFVVFILLIPSCLGYIGDFRCIQLVNSNGNNASAPSISIETVDVSKGLG
C4 MLFV-FLTLLPSSLGYIGDFRCIQLVNTDTSNASAPSVSTEVVDVSKGIG
C5 MLFV-FLLLLPSCLGYIGDFRCINLVNTDMSNASAPSVSTETVDVSKGLG
C6 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C7 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C8 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C9 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C10 MLFVVFILLLPSCLGYIGDFRCIQTVNSNGNNASAPSISTEVVDVSKGLG
C11 MLFV-FLTLLPSSLGYIGDFRCIQLVNTDTSNASAPSVSTEVVDVSKGIG
C12 MLFV-FLTLLPSCLGYIGDFRCINRVNTSISNARAPSVSTEVVDVSKGLG
C13 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C14 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C15 MLFV-FILLLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C16 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C17 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
**** *: ::**.**********: **:. *. **.:* *.*:**:*:*
C1 TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALMGTNTLSLNWFEPPFLSE
C2 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C3 TYYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLNWYKPPFLSE
C4 TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALTGINTISLNWYKPPFLSE
C5 TYYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTISLTWFKPPFLSE
C6 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C7 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C8 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C9 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C10 TYYVLDRVYLNATLLLTGYYPVDGSSYRNLALTGTNTVSLAWFKPPFLSE
C11 TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALTGINTISLNWYKPPFLSE
C12 TYYVLDRVYLNATLLLTGYYPVHGSMYRNMALMGTNTLSLNWFEPPFLSE
C13 TYYVLDRVYLNATLLLTGYYPVDGSKFRNFALTGTNSVSLSWFQPPYLSQ
C14 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C15 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C16 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C17 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
**********************.** :**:** * *::** *::**:**:
C1 FNDGIYAKVKNLKASLPIGSASYFPTIIIGSNFVNTSYTVVLEPYNGIIM
C2 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C3 FNDGIFAKVKNLKASLPAGSSAYFPTIIIGSGFGNTAYTIVMEPYNGIIM
C4 FNDGIFAKVKNLKASLPKDSISYFPTIIIGSNFVTTSYTVVLEPYNGIIM
C5 FNDGIFAKVKNLKANTPKGATSYFPTIVIGSLFGHTSYTVVLEPYNNIIM
C6 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C7 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C8 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C9 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C10 FNDGIFAKVKNLKANTPNGAISFFPTIVMGSLFGNTSYTVVLEPYNNIIM
C11 FNDGIFAKVKNLKASLPKDSISYFPTIIIGSNFVTTSYTVVLEPYNGIIM
C12 FNDGIYAKVKNLKASLPIGSASYFPTIIIGSNFVNTSYTVVLEPYNGIIM
C13 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C14 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C15 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C16 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C17 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
*****:***:***:. * .: ::****::** * *:**:*:****.:**
C1 ASICQYTICQLPHTDCKPNTGGNTLIGFWHTDLRAPVCILKRNFTFNVNA
C2 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C3 ASICQYTICQLPYTDCKPNTGGNSIIGFWHTDIKSPVCILKRNFTFNVNA
C4 ASICQYTICQLPYTDCKPNTGGNKLIGFWHTELKSPVCILKRNFTFNVNA
C5 ASVCTYTICLLPYTDCKANTNGNRLIGFWHTDVKPPTCLLKRNFTFDVNA
C6 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C7 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C8 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C9 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C10 ASVCMYTICQLPYTDCKSNTNGNKIIGFWHTDVKPPTCLLKRNFTFDVNA
C11 ASICQYTICQLPYTDCKPNTGGNKLIGFWHTELKSPVCILKRNFTFNVNA
C12 ASICQYTICQLPHTYCKPNTGGNTLIGFWHTDLRSPVCILTRNFTFNVNA
C13 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C14 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C15 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C16 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C17 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
**:* **** **:* **.**.** :******:::.* *:*.****::***
C1 EWLYFHFYQQGGTFYAYYADVSSATTFLFSSYIGAVLTQYFVLPYMCSPT
C2 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C3 DWLYFHFYQQGGTFYAYYADVASATTFLFSIYIGDVLTQFFVLPFNCEPD
C4 EWLYFHFYQQGGTFYAYYADVSSATTFLFSMYIGDVLTQYFVLPYMCTLT
C5 DWLYFHFYQQGGTFYAYYANVSSATTFLFSIYIGDVLTQYFVLPYICTPS
C6 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C7 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C8 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C9 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C10 EWLYFHFYQQGGTFYAYYANVSSATTFLFSIYIGDVLTQYFVLPYICTPM
C11 EWLYFHFYQQGGTFYAYYADVSSATTFLFSMYIGDVLTQYFVLPYMCTLT
C12 EWLYFHFYQQGGTFYAYYADVSSATTFLFSSYIGAVLTQYFVLPYMCNPT
C13 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C14 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C15 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C16 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C17 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
: :******:*********: .******** *** :***::***: *
C1 TSGVSSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
C2 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C3 KAGVISPQYWVTPLVERQYLFNFNQKGIITSAVDCASSYTAEIKCKTQSM
C4 TTGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
C5 TTGVLSPQYWVTPLVKRQYLFNFNQKGVITGAVDCASSYTSEIKCKTQSL
C6 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C7 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C8 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C9 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C10 SSGVLSPQYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSL
C11 TTGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
C12 TSGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
C13 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C14 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C15 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C16 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C17 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
.. :*:*******:***********:**.*********:********:
C1 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLAANTVPSPLNWERK
C2 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C3 NPSTGVYDLTGYTVQPVGLVYRRVRNLPDCKIEDWLTAKSVPSPLNWERK
C4 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLTAKSVPSPLNWERK
C5 LPSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERR
C6 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C7 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C8 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C9 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C10 SPSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERR
C11 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLTAKSVPSPLNWERK
C12 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLAANTVPSPLNWERK
C13 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C14 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C15 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C16 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C17 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
*.****:*:********:***** *** *:**:**:*.:*********:
C1 TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNSR
C2 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C3 TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSVSIDKFAIPNRR
C4 TFQNCNFDLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNRR
C5 TFQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGGISVDKFAIPRSR
C6 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C7 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C8 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C9 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C10 TFQNCNFNLSSLLRYVQAESLSCTNIDASKVYGMCFGSVSVDKFAIPRSR
C11 TFQNCNFDLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNRR
C12 TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNSR
C13 TFQNCNFNLSSLLRYVQAESLFCNNMDASKVYGRCFGSISVDKFAVPRSR
C14 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C15 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C16 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C17 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
*******:******:****** *.*:******* ***.:*:****:*. *
C1 RVDLQLGKSGLLQSFNYKIDTRATSCQLYYSLAQDNVTVINHNPSSWNRR
C2 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C3 RVDLQIGNSGFLQSFNYKIDSRATSCQLYYSLAQNNVTVNNHNPSSWNRR
C4 RVDLQLGNSGFLQSFNYKIDTRATSCQLYYSLAKNNVTVNNHNPSSWNRR
C5 QIDLQIGNSGFLQTANYKIDTAVTSCQLYYSLPKNNVTINNYNPSSWNRR
C6 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C7 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C8 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C9 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C10 QIDLQIGNSGFLQTANYKIDTAVTSCQLYYSLSKNNVTINNHNPSSWNRR
C11 RVDLQLGNSGFLQSFNYKIDTRATSCQLYYSLAKNNVTVNNHNPSSWNRR
C12 RVDLQLGKSGLLQSFNYKISTRATSCQLYYSLAQNNVTVINHNPSSWNRR
C13 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C14 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C15 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C16 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C17 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
::***:*:**:**: ****.: .*****:*:*.::***: *:********
C1 YGFNDVATFHSGKHDVAYAEACFTVGASYCPCAKPSTVYSCVTG-KPKSA
C2 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C3 YGFNDVATFGSGKHDVAYAEECFTVGNDYCPCANPSIVSPCTQD-KPKAA
C4 YGFNDVATFGTGKHDVAYAEACFTVGASYCPCANPSIVSPCTTG-KPNFA
C5 YGFNDAGVFGKNQHDVAYAQQCFTVRSSYCPCAQPDIVSPCTARTKPMSA
C6 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C7 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C8 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C9 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C10 YGFNDAGVFGKKQHDVAYAQQCFTVRPNYCPCAQPDIVSPCTAATKPSSA
C11 YGFNDVATFGTGKHDVAYAEACFTVGASYCPCANPSIVSPCTTG-KPNFA
C12 YGFNDVATFGSGIHDVAYAEACFTVGASYCPCAKPSIVYSCVTG-KPKSA
C13 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C14 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C15 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C16 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C17 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
*****...* . ***.**: **** .*****:*. * .*. ** *
C1 NCPTGTSNRECNVQASGFKS----------KCDCTCNPSPLTTYDPRCLQ
C2 --------------------------------------------------
C3 NCPVGTRNRECNPLALGGNL---------FKCDCTCNPSPLTTYDLRCLQ
C4 NCPTGTSNRECTVMPLANNQ---------FKCDCTCNPSPLTTYDLRCLQ
C5 YCPVGTTHRECSRSGPHLRSGGHRARVGTYTCECTCKPNPLDTYDLRCGQ
C6 --------------------------------------------------
C7 --------------------------------------------------
C8 --------------------------------------------------
C9 --------------------------------------------------
C10 YCPTGTVHRECSVWSGPHMRSARVGIPGTYTCECTCAPNPLETYDLRCGQ
C11 NCPTGTSNRECTVMPLANNQ---------FKCDCTCNPSPLTTYDLRCLQ
C12 NCPTGTSHRECNVQASGFKH----------KCDCTCNPSPLTTYDPRCLQ
C13 --------------------------------------------------
C14 --------------------------------------------------
C15 --------------------------------------------------
C16 --------------------------------------------------
C17 --------------------------------------------------
C1 ARSTLGVGDHCEGLGILEDKCGGSNI---CNCSADAFVGWAMDSCLSNGR
C2 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C3 ARSMLGVGDHCEGLGVLEDKCGGSNV---CNCTADAFVGWSTDSCLSKGR
C4 ARSMLGVGDHCEGLGVLEDKCGGSNT---CNCSAHAFVGWAKDSCLANGR
C5 IKTIVNVGDHCEGLGVLEDQCGNSDPHKGCVCANASFIGWSHDTCLVNDR
C6 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C7 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C8 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C9 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C10 IKTIVNVGDHCEGLGVLEDKCGNADPHKGCVCANDSFVGWSHDTCLVNDR
C11 ARSMLGVGDHCEGLGVLEDKCGGSNT---CNCSAHAFVGWAKDSCLANGR
C12 ARSMLGVGDHCEGLGILEDKCGGSNI---CNCSADAFVGWAKDSCLSNDR
C13 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C14 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C15 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C16 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C17 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
:.*********:***:**.:: * *: :*:**: *:** :.*
C1 CHIFSNLMLNGINSGTTCSTDFQLPNTEVVTGVCVKYDLYGITGQGVFKE
C2 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C3 CHIFSNLLLNGINSGTTCSTDLQLPNTEVVTGVCVKYHLFGITGQGVFKE
C4 CHIFSNLMLNGINSGTTCSMDLQLPNTEVVTGVCVKYDLYGITGQGIFKE
C5 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGVCVRYDLYGITGQGVFKE
C6 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C7 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C8 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C9 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C10 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGVCVRYDLYGITGQGVFKE
C11 CHIFSNLMLNGINSGTTCSMDLQLPNTEVVTGVCVKYDLYGITGQGIFKE
C12 CHIFSNLMLNGINSGTTCSTDLQLPNTEVVTGVCVKYDLYGITGQGVFKE
C13 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C14 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C15 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C16 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C17 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
*:**:*::*********** *:**********:**:*.*:******:***
C1 VKADYYNSWQNLLYDVNGNLNGFRDSVTNKTYLLRSCYSGRVSAAYHQDA
C2 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C3 VKADYYHSWQNLLYDVNGNLEGFRDIITNKTYTIRSCYSGRVSAAYHQDA
C4 VKADYYHSWQNLLYDVNGNLIGFRDFVANKSYTIRSCYSGRVSAAYHQDA
C5 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHSDA
C6 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C7 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C8 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C9 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C10 AKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHSDA
C11 VKADYYHSWQNLLYDVNGNLIGFRDFVANKSYTIRSCYSGRVSAAYHQDA
C12 VKADYYNSWQNLLYDVNGNLNGFRDIVTNKTYLLRSCYSGRVSAAYHQDA
C13 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C14 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C15 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C16 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C17 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
.*****:***.********* **** :**:* :***********:*.**
C1 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVINADNSTEQSVDA
C2 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C3 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVAV
C4 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVDA
C5 PEPALLYRNINCGFVFNNNISREENPLTYFDSYLGCVVNADNHTDQALPN
C6 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C7 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C8 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C9 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C10 SEPALLYRNINCSFVFNNNISREENPLTYFDSYLGCVVNADNHTEQALPN
C11 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVDA
C12 PEPALLYRNLKCDYVFNNNISREETPLNYFDNYLGCVVNADNSTEHSVDA
C13 PEPALIYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C14 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C15 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C16 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C17 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
.****:***::*.:**.*******.**.***.*****:**** *:.::
C1 CDLRMGSGLCVNYSIAHRARRSVSTGYKLTTFEPFTVSIVNDSVESVGGL
C2 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C3 CDLRMGSGLCVNYSTSHRARRSISTGYKLTTFEPFTVSIVNDSVQSVGGL
C4 CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL
C5 CDLRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYTPMLVNDSVQAIDGM
C6 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C7 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C8 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C9 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C10 CDLRMGAGLCVDYSKARRARRSVSTGYRLTTFEPYTPMLVNDSVQAIDGM
C11 CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL
C12 CDLRMGSGLCVNYSTAHRARRSVSTGYKLTTFEPFTVSIVNDSVESVGGL
C13 CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL
C14 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C15 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C16 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C17 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
******:****:** ::**: *:****:******:* :*****:::.*:
C1 YEMQIPTNFTIASHQEFIQTRSPKVTIDCAAFVCGDYTACRQQLVDYGSF
C2 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C3 YEMQIPINFTIGQHQEFIQTRAPKVTIDCAAFVCGDYTACRQQLVEYGSF
C4 YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF
C5 YDMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNSVCRQQLVEYGSF
C6 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C7 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C8 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C9 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C10 YEMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNSVCRQQLVEYGSF
C11 YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF
C12 YEMQIPTNFTIASQQEFIQTRSPKVTIDCAAFVCGDYTVCRQQLVDYGSF
C13 YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF
C14 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C15 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C16 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C17 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
*::*** ****. ::**:* *:*************. :.******:****
C1 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLADGISGQIDDINFS
C2 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C3 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLADGIGGQIDDINFS
C4 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS
C5 CENVNSILNEVNNLLDNMQLQVASALMQGVTVSSRLPDGIAGPIDDINFS
C6 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C7 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C8 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C9 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C10 CENVNAILNEVNNLLDNMQLQVASALMQGVTVSSSLPDGIAGPIDDINFS
C11 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS
C12 CDNINAILGEVNNLIDTMQLQVASALIQGVTLNSRLADGISGQIDDINFS
C13 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS
C14 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C15 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C16 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C17 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
* *:*:**.*****:*.*********:****:.* *.***.* *******
C1 PLLGCLGSDCSE---GTKAAQGRSAIEDVLFDKVKLSDVGFVESYNNCTG
C2 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C3 PLLGCLGSDCGE--GTTAALKGRSVIEDMLFDKVKLSDVGFVEAYNNCTG
C4 PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
C5 PLLGCIGSTCSESENGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C6 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C7 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C8 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C9 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C10 PLLGCIGSTCSESENGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C11 PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
C12 PLLGCLGSYCSE---GTMAVQGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
C13 PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
C14 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C15 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C16 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C17 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
*****:** *.* * ***.***:**************:******
C1 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV
C2 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C3 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV
C4 GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV
C5 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C6 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C7 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C8 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C9 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C10 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C11 GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV
C12 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV
C13 GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV
C14 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C15 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C16 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C17 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
*************************.******:***.:*** ********
C1 PFALSVQYRINGLGVTMNVLSENQKMIASSFNNAIGAIQEGFDATNSALA
C2 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C3 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFDATNSALA
C4 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA
C5 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALA
C6 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C7 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C8 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C9 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C10 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALA
C11 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA
C12 PFALSVQYRINGLGVTMNVLSENQKMIASSFNNAIGAIQEGFDATNSALA
C13 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA
C14 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C15 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C16 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C17 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
**:**************************:****:****:** ******.
C1 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C2 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C3 KIQSVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C4 KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C5 KLQSVVNANAEALNNLLGQLSNRFGAISASLQEILSRLDALEAQVQVDRL
C6 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C7 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C8 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C9 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C10 KIQSVVNANAEALNNLLGQLSNRFGAISASLQEILSRLDALEAQVQVDRL
C11 KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C12 KIQSVVNSNAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C13 KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C14 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C15 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C16 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C17 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
*:* ***:********* *****************:**:*:**:.*:***
C1 INGRLTALNAYVSKQLSDMTLIKVSAAQAIEKVNECVKSQSPRINFCGNG
C2 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C3 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSPRINFCGNG
C4 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG
C5 ISGRLTALNAYVSKQLSDSTLIKFSAAQAIEKVNECVKSQTMRINFCGSG
C6 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C7 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C8 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C9 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C10 INGRLTALNAYVSKQLSDSTLIKFSAAHAIEKVNECVKSQTMRINFCGSG
C11 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG
C12 INGRLTALNAYVSKHLSDMTLIKVSAAQAIEKVNECVKSQSPRINFCGNG
C13 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG
C14 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C15 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C16 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C17 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
*.*********:**:*** **:*.***:************: ******.*
C1 NHILSLVQNAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF
C2 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C3 NHILSLVQSAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF
C4 NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF
C5 NHILSLVQNAPYGLYFIHFSYVPTSFTTARVSPGLCIAGDRGLAPKAGYF
C6 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C7 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C8 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C9 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C10 NHILSLVQNAPYGLYFIHFSYVPTSFTTARVSPGLCIAGDRGLAPKAGYF
C11 NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF
C12 NHILSLVQNAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF
C13 NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF
C14 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C15 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C16 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C17 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
********.************** ****..*******:************
C1 VQDHGEWKFTGSNYYYPESIIDKNSVVMSSCAVNYTKAPEVFLNTSITNL
C2 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C3 VQDNGEWKFTGSGYYYPEPINDKNSVVMSSCAVNYTKAPEVFLNTSIPNL
C4 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL
C5 VQDNGEWKFTGSGYYYPEPITDKNSVVMSSCAVNYTKAPEVFLNTSIPNL
C6 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C7 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C8 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C9 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C10 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAVNYTKAPEVFLNTSIPNL
C11 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL
C12 VQDHGEWKFTGSNYYYPESITDKNSVVMSSCAVNYTKAPEVFLNTSITNL
C13 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL
C14 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C15 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C16 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C17 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
***.********.*****.* *****:*****.**************.*
C1 PDFKEELDKWFKNQTSIVPDLSFDIGKLNVTFLDLSYEMNRIQDAIKNLN
C2 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C3 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQESIKKLN
C4 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN
C5 SDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQDAIKKLN
C6 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C7 PDFKEVLDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C8 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C9 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C10 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQDAINKLN
C11 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN
C12 PDFKEELDKWFKNQTSIVPDLSFDIGKLNVTFLDLSYEMNRIQDAIKNLN
C13 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN
C14 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C15 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C16 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C17 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
.**** ***********.****:*: *****:***: ******::*::**
C1 ESYINLKEIGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C2 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C3 ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGSCC
C4 ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C5 ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGLCC
C6 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C7 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C8 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C9 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C10 ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGSCC
C11 ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C12 ESYINLKEIGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C13 ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C14 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C15 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C16 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C17 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
*******::************:************************* **
C1 FKKCGNCCDEYGGRQAGIVIHNISSHED
C2 FKKCGNCCDEYGGHQDSIVIHNISSHED
C3 FKKCGNCCDEYGGHQDSIVIHNISSHED
C4 FKKCGNCCDECGGHQDSIVIHNISSHED
C5 FKKCGNCCDEYGGHQDSIVIHNISSHED
C6 FKKCGNCCDEYGGHQDSIVIHNISSHED
C7 FKKCGNCCDEYGGHQDSIVIHNISSHED
C8 FKKCGNCCDEYGGHQDSIVIHNISSHED
C9 FKKCGNCCDEYGGHQDSIVIHNISSHED
C10 FKKCGSCCDEYGGHQDSIVIHNISSHEG
C11 FKKCGNCCDECGGHQDSIVIHNISSHED
C12 FKKCGNCCDEYGGRQAGIVIHNISSHED
C13 FKKCGNCCDECGGHQDSIVIHNISSHED
C14 FKKCGNCCDEYGGHQDSIVIHNISSHED
C15 FKKCGNCCDEYGGHQDSIVIHNISSHED
C16 FKKCGNCCDEYGGHQDSIVIHNISSHED
C17 FKKCGNCCDEYGGHQDSIVIHNISSHED
*****.**** **:* .**********.
-- Starting log on Wed Nov 02 20:14:42 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.65 sec, SCORE=997, Nseq=17, Len=1378
C1 MLFV-FLTLLPSCLGYIGDFRCINRVNTSISNARAPCVSTEVVDVSKGLG
C2 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C3 MLFVVFILLIPSCLGYIGDFRCIQLVNSNGNNASAPSISIETVDVSKGLG
C4 MLFV-FLTLLPSSLGYIGDFRCIQLVNTDTSNASAPSVSTEVVDVSKGIG
C5 MLFV-FLLLLPSCLGYIGDFRCINLVNTDMSNASAPSVSTETVDVSKGLG
C6 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C7 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C8 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C9 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C10 MLFVVFILLLPSCLGYIGDFRCIQTVNSNGNNASAPSISTEVVDVSKGLG
C11 MLFV-FLTLLPSSLGYIGDFRCIQLVNTDTSNASAPSVSTEVVDVSKGIG
C12 MLFV-FLTLLPSCLGYIGDFRCINRVNTSISNARAPSVSTEVVDVSKGLG
C13 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C14 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C15 MLFV-FILLLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C16 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C17 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
**** *: ::**.**********: **:. *. **.:* *.*:**:*:*
C1 TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALMGTNTLSLNWFEPPFLSE
C2 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C3 TYYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLNWYKPPFLSE
C4 TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALTGINTISLNWYKPPFLSE
C5 TYYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTISLTWFKPPFLSE
C6 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C7 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C8 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C9 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C10 TYYVLDRVYLNATLLLTGYYPVDGSSYRNLALTGTNTVSLAWFKPPFLSE
C11 TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALTGINTISLNWYKPPFLSE
C12 TYYVLDRVYLNATLLLTGYYPVHGSMYRNMALMGTNTLSLNWFEPPFLSE
C13 TYYVLDRVYLNATLLLTGYYPVDGSKFRNFALTGTNSVSLSWFQPPYLSQ
C14 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C15 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C16 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C17 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
**********************.** :**:** * *::** *::**:**:
C1 FNDGIYAKVKNLKASLPIGSASYFPTIIIGSNFVNTSYTVVLEPYNGIIM
C2 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C3 FNDGIFAKVKNLKASLPAGSSAYFPTIIIGSGFGNTAYTIVMEPYNGIIM
C4 FNDGIFAKVKNLKASLPKDSISYFPTIIIGSNFVTTSYTVVLEPYNGIIM
C5 FNDGIFAKVKNLKANTPKGATSYFPTIVIGSLFGHTSYTVVLEPYNNIIM
C6 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C7 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C8 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C9 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C10 FNDGIFAKVKNLKANTPNGAISFFPTIVMGSLFGNTSYTVVLEPYNNIIM
C11 FNDGIFAKVKNLKASLPKDSISYFPTIIIGSNFVTTSYTVVLEPYNGIIM
C12 FNDGIYAKVKNLKASLPIGSASYFPTIIIGSNFVNTSYTVVLEPYNGIIM
C13 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C14 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C15 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C16 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C17 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
*****:***:***:. * .: ::****::** * *:**:*:****.:**
C1 ASICQYTICQLPHTDCKPNTGGNTLIGFWHTDLRAPVCILKRNFTFNVNA
C2 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C3 ASICQYTICQLPYTDCKPNTGGNSIIGFWHTDIKSPVCILKRNFTFNVNA
C4 ASICQYTICQLPYTDCKPNTGGNKLIGFWHTELKSPVCILKRNFTFNVNA
C5 ASVCTYTICLLPYTDCKANTNGNRLIGFWHTDVKPPTCLLKRNFTFDVNA
C6 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C7 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C8 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C9 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C10 ASVCMYTICQLPYTDCKSNTNGNKIIGFWHTDVKPPTCLLKRNFTFDVNA
C11 ASICQYTICQLPYTDCKPNTGGNKLIGFWHTELKSPVCILKRNFTFNVNA
C12 ASICQYTICQLPHTYCKPNTGGNTLIGFWHTDLRSPVCILTRNFTFNVNA
C13 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C14 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C15 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C16 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C17 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
**:* **** **:* **.**.** :******:::.* *:*.****::***
C1 EWLYFHFYQQGGTFYAYYADVSSATTFLFSSYIGAVLTQYFVLPYMCSPT
C2 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C3 DWLYFHFYQQGGTFYAYYADVASATTFLFSIYIGDVLTQFFVLPFNCEPD
C4 EWLYFHFYQQGGTFYAYYADVSSATTFLFSMYIGDVLTQYFVLPYMCTLT
C5 DWLYFHFYQQGGTFYAYYANVSSATTFLFSIYIGDVLTQYFVLPYICTPS
C6 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C7 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C8 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C9 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C10 EWLYFHFYQQGGTFYAYYANVSSATTFLFSIYIGDVLTQYFVLPYICTPM
C11 EWLYFHFYQQGGTFYAYYADVSSATTFLFSMYIGDVLTQYFVLPYMCTLT
C12 EWLYFHFYQQGGTFYAYYADVSSATTFLFSSYIGAVLTQYFVLPYMCNPT
C13 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C14 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C15 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C16 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C17 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
: :******:*********: .******** *** :***::***: *
C1 TSGVSSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
C2 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C3 KAGVISPQYWVTPLVERQYLFNFNQKGIITSAVDCASSYTAEIKCKTQSM
C4 TTGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
C5 TTGVLSPQYWVTPLVKRQYLFNFNQKGVITGAVDCASSYTSEIKCKTQSL
C6 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C7 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C8 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C9 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C10 SSGVLSPQYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSL
C11 TTGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
C12 TSGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
C13 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C14 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C15 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C16 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C17 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
.. :*:*******:***********:**.*********:********:
C1 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLAANTVPSPLNWERK
C2 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C3 NPSTGVYDLTGYTVQPVGLVYRRVRNLPDCKIEDWLTAKSVPSPLNWERK
C4 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLTAKSVPSPLNWERK
C5 LPSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERR
C6 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C7 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C8 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C9 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C10 SPSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERR
C11 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLTAKSVPSPLNWERK
C12 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLAANTVPSPLNWERK
C13 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C14 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C15 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C16 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C17 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
*.****:*:********:***** *** *:**:**:*.:*********:
C1 TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNSR
C2 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C3 TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSVSIDKFAIPNRR
C4 TFQNCNFDLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNRR
C5 TFQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGGISVDKFAIPRSR
C6 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C7 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C8 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C9 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C10 TFQNCNFNLSSLLRYVQAESLSCTNIDASKVYGMCFGSVSVDKFAIPRSR
C11 TFQNCNFDLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNRR
C12 TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNSR
C13 TFQNCNFNLSSLLRYVQAESLFCNNMDASKVYGRCFGSISVDKFAVPRSR
C14 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C15 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C16 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C17 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
*******:******:****** *.*:******* ***.:*:****:*. *
C1 RVDLQLGKSGLLQSFNYKIDTRATSCQLYYSLAQDNVTVINHNPSSWNRR
C2 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C3 RVDLQIGNSGFLQSFNYKIDSRATSCQLYYSLAQNNVTVNNHNPSSWNRR
C4 RVDLQLGNSGFLQSFNYKIDTRATSCQLYYSLAKNNVTVNNHNPSSWNRR
C5 QIDLQIGNSGFLQTANYKIDTAVTSCQLYYSLPKNNVTINNYNPSSWNRR
C6 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C7 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C8 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C9 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C10 QIDLQIGNSGFLQTANYKIDTAVTSCQLYYSLSKNNVTINNHNPSSWNRR
C11 RVDLQLGNSGFLQSFNYKIDTRATSCQLYYSLAKNNVTVNNHNPSSWNRR
C12 RVDLQLGKSGLLQSFNYKISTRATSCQLYYSLAQNNVTVINHNPSSWNRR
C13 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C14 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C15 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C16 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C17 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
::***:*:**:**: ****.: .*****:*:*.::***: *:********
C1 YGFNDVATFHSGKHDVAYAEACFTVGASYCPCAKPSTVYSCVTG-KPKSA
C2 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C3 YGFNDVATFGSGKHDVAYAEECFTVGNDYCPCANPSIVSPCTQD-KPKAA
C4 YGFNDVATFGTGKHDVAYAEACFTVGASYCPCANPSIVSPCTTG-KPNFA
C5 YGFNDAGVFGKNQHDVAYAQQCFTVRSSYCPCAQPDIVSPCTARTKPMSA
C6 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C7 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C8 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C9 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C10 YGFNDAGVFGKKQHDVAYAQQCFTVRPNYCPCAQPDIVSPCTAATKPSSA
C11 YGFNDVATFGTGKHDVAYAEACFTVGASYCPCANPSIVSPCTTG-KPNFA
C12 YGFNDVATFGSGIHDVAYAEACFTVGASYCPCAKPSIVYSCVTG-KPKSA
C13 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C14 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C15 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C16 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C17 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
*****...* . ***.**: **** .*****:*. * .*. ** *
C1 NCPTGTSNRECNVQASGFKS----------KCDCTCNPSPLTTYDPRCLQ
C2 --------------------------------------------------
C3 NCPVGTRNRECNPLALGGNL---------FKCDCTCNPSPLTTYDLRCLQ
C4 NCPTGTSNRECTVMPLANNQ---------FKCDCTCNPSPLTTYDLRCLQ
C5 YCPVGTTHRECSRSGPHLRSGGHRARVGTYTCECTCKPNPLDTYDLRCGQ
C6 --------------------------------------------------
C7 --------------------------------------------------
C8 --------------------------------------------------
C9 --------------------------------------------------
C10 YCPTGTVHRECSVWSGPHMRSARVGIPGTYTCECTCAPNPLETYDLRCGQ
C11 NCPTGTSNRECTVMPLANNQ---------FKCDCTCNPSPLTTYDLRCLQ
C12 NCPTGTSHRECNVQASGFKH----------KCDCTCNPSPLTTYDPRCLQ
C13 --------------------------------------------------
C14 --------------------------------------------------
C15 --------------------------------------------------
C16 --------------------------------------------------
C17 --------------------------------------------------
C1 ARSTLGVGDHCEGLGILEDKCGGSNI---CNCSADAFVGWAMDSCLSNGR
C2 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C3 ARSMLGVGDHCEGLGVLEDKCGGSNV---CNCTADAFVGWSTDSCLSKGR
C4 ARSMLGVGDHCEGLGVLEDKCGGSNT---CNCSAHAFVGWAKDSCLANGR
C5 IKTIVNVGDHCEGLGVLEDQCGNSDPHKGCVCANASFIGWSHDTCLVNDR
C6 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C7 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C8 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C9 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C10 IKTIVNVGDHCEGLGVLEDKCGNADPHKGCVCANDSFVGWSHDTCLVNDR
C11 ARSMLGVGDHCEGLGVLEDKCGGSNT---CNCSAHAFVGWAKDSCLANGR
C12 ARSMLGVGDHCEGLGILEDKCGGSNI---CNCSADAFVGWAKDSCLSNDR
C13 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C14 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C15 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C16 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C17 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
:.*********:***:**.:: * *: :*:**: *:** :.*
C1 CHIFSNLMLNGINSGTTCSTDFQLPNTEVVTGVCVKYDLYGITGQGVFKE
C2 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C3 CHIFSNLLLNGINSGTTCSTDLQLPNTEVVTGVCVKYHLFGITGQGVFKE
C4 CHIFSNLMLNGINSGTTCSMDLQLPNTEVVTGVCVKYDLYGITGQGIFKE
C5 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGVCVRYDLYGITGQGVFKE
C6 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C7 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C8 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C9 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C10 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGVCVRYDLYGITGQGVFKE
C11 CHIFSNLMLNGINSGTTCSMDLQLPNTEVVTGVCVKYDLYGITGQGIFKE
C12 CHIFSNLMLNGINSGTTCSTDLQLPNTEVVTGVCVKYDLYGITGQGVFKE
C13 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C14 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C15 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C16 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C17 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
*:**:*::*********** *:**********:**:*.*:******:***
C1 VKADYYNSWQNLLYDVNGNLNGFRDSVTNKTYLLRSCYSGRVSAAYHQDA
C2 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C3 VKADYYHSWQNLLYDVNGNLEGFRDIITNKTYTIRSCYSGRVSAAYHQDA
C4 VKADYYHSWQNLLYDVNGNLIGFRDFVANKSYTIRSCYSGRVSAAYHQDA
C5 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHSDA
C6 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C7 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C8 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C9 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C10 AKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHSDA
C11 VKADYYHSWQNLLYDVNGNLIGFRDFVANKSYTIRSCYSGRVSAAYHQDA
C12 VKADYYNSWQNLLYDVNGNLNGFRDIVTNKTYLLRSCYSGRVSAAYHQDA
C13 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C14 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C15 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C16 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C17 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
.*****:***.********* **** :**:* :***********:*.**
C1 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVINADNSTEQSVDA
C2 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C3 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVAV
C4 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVDA
C5 PEPALLYRNINCGFVFNNNISREENPLTYFDSYLGCVVNADNHTDQALPN
C6 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C7 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C8 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C9 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C10 SEPALLYRNINCSFVFNNNISREENPLTYFDSYLGCVVNADNHTEQALPN
C11 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVDA
C12 PEPALLYRNLKCDYVFNNNISREETPLNYFDNYLGCVVNADNSTEHSVDA
C13 PEPALIYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C14 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C15 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C16 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C17 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
.****:***::*.:**.*******.**.***.*****:**** *:.::
C1 CDLRMGSGLCVNYSIAHRARRSVSTGYKLTTFEPFTVSIVNDSVESVGGL
C2 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C3 CDLRMGSGLCVNYSTSHRARRSISTGYKLTTFEPFTVSIVNDSVQSVGGL
C4 CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL
C5 CDLRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYTPMLVNDSVQAIDGM
C6 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C7 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C8 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C9 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C10 CDLRMGAGLCVDYSKARRARRSVSTGYRLTTFEPYTPMLVNDSVQAIDGM
C11 CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL
C12 CDLRMGSGLCVNYSTAHRARRSVSTGYKLTTFEPFTVSIVNDSVESVGGL
C13 CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL
C14 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C15 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C16 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C17 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
******:****:** ::**: *:****:******:* :*****:::.*:
C1 YEMQIPTNFTIASHQEFIQTRSPKVTIDCAAFVCGDYTACRQQLVDYGSF
C2 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C3 YEMQIPINFTIGQHQEFIQTRAPKVTIDCAAFVCGDYTACRQQLVEYGSF
C4 YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF
C5 YDMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNSVCRQQLVEYGSF
C6 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C7 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C8 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C9 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C10 YEMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNSVCRQQLVEYGSF
C11 YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF
C12 YEMQIPTNFTIASQQEFIQTRSPKVTIDCAAFVCGDYTVCRQQLVDYGSF
C13 YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF
C14 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C15 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C16 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C17 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
*::*** ****. ::**:* *:*************. :.******:****
C1 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLADGISGQIDDINFS
C2 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C3 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLADGIGGQIDDINFS
C4 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS
C5 CENVNSILNEVNNLLDNMQLQVASALMQGVTVSSRLPDGIAGPIDDINFS
C6 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C7 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C8 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C9 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C10 CENVNAILNEVNNLLDNMQLQVASALMQGVTVSSSLPDGIAGPIDDINFS
C11 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS
C12 CDNINAILGEVNNLIDTMQLQVASALIQGVTLNSRLADGISGQIDDINFS
C13 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS
C14 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C15 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C16 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C17 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
* *:*:**.*****:*.*********:****:.* *.***.* *******
C1 PLLGCLGSDCSE---GTKAAQGRSAIEDVLFDKVKLSDVGFVESYNNCTG
C2 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C3 PLLGCLGSDCGE--GTTAALKGRSVIEDMLFDKVKLSDVGFVEAYNNCTG
C4 PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
C5 PLLGCIGSTCSESENGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C6 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C7 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C8 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C9 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C10 PLLGCIGSTCSESENGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C11 PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
C12 PLLGCLGSYCSE---GTMAVQGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
C13 PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
C14 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C15 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C16 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C17 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
*****:** *.* * ***.***:**************:******
C1 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV
C2 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C3 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV
C4 GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV
C5 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C6 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C7 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C8 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C9 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C10 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C11 GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV
C12 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV
C13 GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV
C14 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C15 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C16 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C17 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
*************************.******:***.:*** ********
C1 PFALSVQYRINGLGVTMNVLSENQKMIASSFNNAIGAIQEGFDATNSALA
C2 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C3 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFDATNSALA
C4 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA
C5 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALA
C6 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C7 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C8 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C9 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C10 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALA
C11 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA
C12 PFALSVQYRINGLGVTMNVLSENQKMIASSFNNAIGAIQEGFDATNSALA
C13 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA
C14 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C15 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C16 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C17 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
**:**************************:****:****:** ******.
C1 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C2 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C3 KIQSVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C4 KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C5 KLQSVVNANAEALNNLLGQLSNRFGAISASLQEILSRLDALEAQVQVDRL
C6 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C7 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C8 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C9 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C10 KIQSVVNANAEALNNLLGQLSNRFGAISASLQEILSRLDALEAQVQVDRL
C11 KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C12 KIQSVVNSNAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C13 KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C14 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C15 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C16 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C17 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
*:* ***:********* *****************:**:*:**:.*:***
C1 INGRLTALNAYVSKQLSDMTLIKVSAAQAIEKVNECVKSQSPRINFCGNG
C2 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C3 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSPRINFCGNG
C4 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG
C5 ISGRLTALNAYVSKQLSDSTLIKFSAAQAIEKVNECVKSQTMRINFCGSG
C6 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C7 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C8 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C9 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C10 INGRLTALNAYVSKQLSDSTLIKFSAAHAIEKVNECVKSQTMRINFCGSG
C11 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG
C12 INGRLTALNAYVSKHLSDMTLIKVSAAQAIEKVNECVKSQSPRINFCGNG
C13 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG
C14 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C15 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C16 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C17 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
*.*********:**:*** **:*.***:************: ******.*
C1 NHILSLVQNAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF
C2 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C3 NHILSLVQSAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF
C4 NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF
C5 NHILSLVQNAPYGLYFIHFSYVPTSFTTARVSPGLCIAGDRGLAPKAGYF
C6 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C7 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C8 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C9 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C10 NHILSLVQNAPYGLYFIHFSYVPTSFTTARVSPGLCIAGDRGLAPKAGYF
C11 NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF
C12 NHILSLVQNAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF
C13 NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF
C14 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C15 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C16 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C17 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
********.************** ****..*******:************
C1 VQDHGEWKFTGSNYYYPESIIDKNSVVMSSCAVNYTKAPEVFLNTSITNL
C2 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C3 VQDNGEWKFTGSGYYYPEPINDKNSVVMSSCAVNYTKAPEVFLNTSIPNL
C4 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL
C5 VQDNGEWKFTGSGYYYPEPITDKNSVVMSSCAVNYTKAPEVFLNTSIPNL
C6 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C7 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C8 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C9 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C10 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAVNYTKAPEVFLNTSIPNL
C11 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL
C12 VQDHGEWKFTGSNYYYPESITDKNSVVMSSCAVNYTKAPEVFLNTSITNL
C13 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL
C14 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C15 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C16 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C17 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
***.********.*****.* *****:*****.**************.*
C1 PDFKEELDKWFKNQTSIVPDLSFDIGKLNVTFLDLSYEMNRIQDAIKNLN
C2 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C3 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQESIKKLN
C4 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN
C5 SDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQDAIKKLN
C6 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C7 PDFKEVLDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C8 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C9 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C10 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQDAINKLN
C11 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN
C12 PDFKEELDKWFKNQTSIVPDLSFDIGKLNVTFLDLSYEMNRIQDAIKNLN
C13 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN
C14 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C15 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C16 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C17 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
.**** ***********.****:*: *****:***: ******::*::**
C1 ESYINLKEIGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C2 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C3 ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGSCC
C4 ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C5 ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGLCC
C6 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C7 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C8 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C9 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C10 ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGSCC
C11 ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C12 ESYINLKEIGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C13 ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C14 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C15 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C16 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C17 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
*******::************:************************* **
C1 FKKCGNCCDEYGGRQAGIVIHNISSHED
C2 FKKCGNCCDEYGGHQDSIVIHNISSHED
C3 FKKCGNCCDEYGGHQDSIVIHNISSHED
C4 FKKCGNCCDECGGHQDSIVIHNISSHED
C5 FKKCGNCCDEYGGHQDSIVIHNISSHED
C6 FKKCGNCCDEYGGHQDSIVIHNISSHED
C7 FKKCGNCCDEYGGHQDSIVIHNISSHED
C8 FKKCGNCCDEYGGHQDSIVIHNISSHED
C9 FKKCGNCCDEYGGHQDSIVIHNISSHED
C10 FKKCGSCCDEYGGHQDSIVIHNISSHEG
C11 FKKCGNCCDECGGHQDSIVIHNISSHED
C12 FKKCGNCCDEYGGRQAGIVIHNISSHED
C13 FKKCGNCCDECGGHQDSIVIHNISSHED
C14 FKKCGNCCDEYGGHQDSIVIHNISSHED
C15 FKKCGNCCDEYGGHQDSIVIHNISSHED
C16 FKKCGNCCDEYGGHQDSIVIHNISSHED
C17 FKKCGNCCDEYGGHQDSIVIHNISSHED
*****.**** **:* .**********.
-- Starting log on Wed Nov 02 20:11:33 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.11 sec, SCORE=1000, Nseq=17, Len=1378
C1 MLFV-FLTLLPSCLGYIGDFRCINRVNTSISNARAPCVSTEVVDVSKGLG
C2 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C3 MLFVVFILLIPSCLGYIGDFRCIQLVNSNGNNASAPSISIETVDVSKGLG
C4 MLFV-FLTLLPSSLGYIGDFRCIQLVNTDTSNASAPSVSTEVVDVSKGIG
C5 MLFV-FLLLLPSCLGYIGDFRCINLVNTDMSNASAPSVSTETVDVSKGLG
C6 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C7 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C8 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C9 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C10 MLFVVFILLLPSCLGYIGDFRCIQTVNSNGNNASAPSISTEVVDVSKGLG
C11 MLFV-FLTLLPSSLGYIGDFRCIQLVNTDTSNASAPSVSTEVVDVSKGIG
C12 MLFV-FLTLLPSCLGYIGDFRCINRVNTSISNARAPSVSTEVVDVSKGLG
C13 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C14 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C15 MLFV-FILLLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C16 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
C17 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
**** *: ::**.**********: **:. *. **.:* *.*:**:*:*
C1 TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALMGTNTLSLNWFEPPFLSE
C2 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C3 TYYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLNWYKPPFLSE
C4 TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALTGINTISLNWYKPPFLSE
C5 TYYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTISLTWFKPPFLSE
C6 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C7 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C8 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C9 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C10 TYYVLDRVYLNATLLLTGYYPVDGSSYRNLALTGTNTVSLAWFKPPFLSE
C11 TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALTGINTISLNWYKPPFLSE
C12 TYYVLDRVYLNATLLLTGYYPVHGSMYRNMALMGTNTLSLNWFEPPFLSE
C13 TYYVLDRVYLNATLLLTGYYPVDGSKFRNFALTGTNSVSLSWFQPPYLSQ
C14 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C15 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C16 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
C17 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
**********************.** :**:** * *::** *::**:**:
C1 FNDGIYAKVKNLKASLPIGSASYFPTIIIGSNFVNTSYTVVLEPYNGIIM
C2 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C3 FNDGIFAKVKNLKASLPAGSSAYFPTIIIGSGFGNTAYTIVMEPYNGIIM
C4 FNDGIFAKVKNLKASLPKDSISYFPTIIIGSNFVTTSYTVVLEPYNGIIM
C5 FNDGIFAKVKNLKANTPKGATSYFPTIVIGSLFGHTSYTVVLEPYNNIIM
C6 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C7 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C8 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C9 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C10 FNDGIFAKVKNLKANTPNGAISFFPTIVMGSLFGNTSYTVVLEPYNNIIM
C11 FNDGIFAKVKNLKASLPKDSISYFPTIIIGSNFVTTSYTVVLEPYNGIIM
C12 FNDGIYAKVKNLKASLPIGSASYFPTIIIGSNFVNTSYTVVLEPYNGIIM
C13 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C14 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C15 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C16 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
C17 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
*****:***:***:. * .: ::****::** * *:**:*:****.:**
C1 ASICQYTICQLPHTDCKPNTGGNTLIGFWHTDLRAPVCILKRNFTFNVNA
C2 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C3 ASICQYTICQLPYTDCKPNTGGNSIIGFWHTDIKSPVCILKRNFTFNVNA
C4 ASICQYTICQLPYTDCKPNTGGNKLIGFWHTELKSPVCILKRNFTFNVNA
C5 ASVCTYTICLLPYTDCKANTNGNRLIGFWHTDVKPPTCLLKRNFTFDVNA
C6 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C7 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C8 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C9 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C10 ASVCMYTICQLPYTDCKSNTNGNKIIGFWHTDVKPPTCLLKRNFTFDVNA
C11 ASICQYTICQLPYTDCKPNTGGNKLIGFWHTELKSPVCILKRNFTFNVNA
C12 ASICQYTICQLPHTYCKPNTGGNTLIGFWHTDLRSPVCILTRNFTFNVNA
C13 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C14 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C15 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C16 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
C17 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
**:* **** **:* **.**.** :******:::.* *:*.****::***
C1 EWLYFHFYQQGGTFYAYYADVSSATTFLFSSYIGAVLTQYFVLPYMCSPT
C2 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C3 DWLYFHFYQQGGTFYAYYADVASATTFLFSIYIGDVLTQFFVLPFNCEPD
C4 EWLYFHFYQQGGTFYAYYADVSSATTFLFSMYIGDVLTQYFVLPYMCTLT
C5 DWLYFHFYQQGGTFYAYYANVSSATTFLFSIYIGDVLTQYFVLPYICTPS
C6 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C7 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C8 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C9 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C10 EWLYFHFYQQGGTFYAYYANVSSATTFLFSIYIGDVLTQYFVLPYICTPM
C11 EWLYFHFYQQGGTFYAYYADVSSATTFLFSMYIGDVLTQYFVLPYMCTLT
C12 EWLYFHFYQQGGTFYAYYADVSSATTFLFSSYIGAVLTQYFVLPYMCNPT
C13 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C14 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C15 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C16 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
C17 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
: :******:*********: .******** *** :***::***: *
C1 TSGVSSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
C2 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C3 KAGVISPQYWVTPLVERQYLFNFNQKGIITSAVDCASSYTAEIKCKTQSM
C4 TTGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
C5 TTGVLSPQYWVTPLVKRQYLFNFNQKGVITGAVDCASSYTSEIKCKTQSL
C6 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C7 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C8 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C9 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C10 SSGVLSPQYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSL
C11 TTGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
C12 TSGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
C13 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C14 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C15 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C16 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
C17 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
.. :*:*******:***********:**.*********:********:
C1 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLAANTVPSPLNWERK
C2 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C3 NPSTGVYDLTGYTVQPVGLVYRRVRNLPDCKIEDWLTAKSVPSPLNWERK
C4 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLTAKSVPSPLNWERK
C5 LPSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERR
C6 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C7 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C8 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C9 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C10 SPSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERR
C11 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLTAKSVPSPLNWERK
C12 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLAANTVPSPLNWERK
C13 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C14 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C15 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C16 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
C17 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
*.****:*:********:***** *** *:**:**:*.:*********:
C1 TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNSR
C2 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C3 TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSVSIDKFAIPNRR
C4 TFQNCNFDLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNRR
C5 TFQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGGISVDKFAIPRSR
C6 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C7 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C8 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C9 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C10 TFQNCNFNLSSLLRYVQAESLSCTNIDASKVYGMCFGSVSVDKFAIPRSR
C11 TFQNCNFDLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNRR
C12 TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNSR
C13 TFQNCNFNLSSLLRYVQAESLFCNNMDASKVYGRCFGSISVDKFAVPRSR
C14 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C15 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C16 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
C17 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
*******:******:****** *.*:******* ***.:*:****:*. *
C1 RVDLQLGKSGLLQSFNYKIDTRATSCQLYYSLAQDNVTVINHNPSSWNRR
C2 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C3 RVDLQIGNSGFLQSFNYKIDSRATSCQLYYSLAQNNVTVNNHNPSSWNRR
C4 RVDLQLGNSGFLQSFNYKIDTRATSCQLYYSLAKNNVTVNNHNPSSWNRR
C5 QIDLQIGNSGFLQTANYKIDTAVTSCQLYYSLPKNNVTINNYNPSSWNRR
C6 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C7 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C8 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C9 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C10 QIDLQIGNSGFLQTANYKIDTAVTSCQLYYSLSKNNVTINNHNPSSWNRR
C11 RVDLQLGNSGFLQSFNYKIDTRATSCQLYYSLAKNNVTVNNHNPSSWNRR
C12 RVDLQLGKSGLLQSFNYKISTRATSCQLYYSLAQNNVTVINHNPSSWNRR
C13 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C14 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C15 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C16 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
C17 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
::***:*:**:**: ****.: .*****:*:*.::***: *:********
C1 YGFNDVATFHSGKHDVAYAEACFTVGASYCPCAKPSTVYSCVTG-KPKSA
C2 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C3 YGFNDVATFGSGKHDVAYAEECFTVGNDYCPCANPSIVSPCTQD-KPKAA
C4 YGFNDVATFGTGKHDVAYAEACFTVGASYCPCANPSIVSPCTTG-KPNFA
C5 YGFNDAGVFGKNQHDVAYAQQCFTVRSSYCPCAQPDIVSPCTARTKPMSA
C6 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C7 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C8 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C9 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C10 YGFNDAGVFGKKQHDVAYAQQCFTVRPNYCPCAQPDIVSPCTAATKPSSA
C11 YGFNDVATFGTGKHDVAYAEACFTVGASYCPCANPSIVSPCTTG-KPNFA
C12 YGFNDVATFGSGIHDVAYAEACFTVGASYCPCAKPSIVYSCVTG-KPKSA
C13 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C14 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C15 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C16 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
C17 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
*****...* . ***.**: **** .*****:*. * .*. ** *
C1 NCPTGTSNRECNVQASGFKS----------KCDCTCNPSPLTTYDPRCLQ
C2 --------------------------------------------------
C3 NCPVGTRNRECNPLALGGNL---------FKCDCTCNPSPLTTYDLRCLQ
C4 NCPTGTSNRECTVMPLANNQ---------FKCDCTCNPSPLTTYDLRCLQ
C5 YCPVGTTHRECSRSGPHLRSGGHRARVGTYTCECTCKPNPLDTYDLRCGQ
C6 --------------------------------------------------
C7 --------------------------------------------------
C8 --------------------------------------------------
C9 --------------------------------------------------
C10 YCPTGTVHRECSVWSGPHMRSARVGIPGTYTCECTCAPNPLETYDLRCGQ
C11 NCPTGTSNRECTVMPLANNQ---------FKCDCTCNPSPLTTYDLRCLQ
C12 NCPTGTSHRECNVQASGFKH----------KCDCTCNPSPLTTYDPRCLQ
C13 --------------------------------------------------
C14 --------------------------------------------------
C15 --------------------------------------------------
C16 --------------------------------------------------
C17 --------------------------------------------------
C1 ARSTLGVGDHCEGLGILEDKCGGSNI---CNCSADAFVGWAMDSCLSNGR
C2 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C3 ARSMLGVGDHCEGLGVLEDKCGGSNV---CNCTADAFVGWSTDSCLSKGR
C4 ARSMLGVGDHCEGLGVLEDKCGGSNT---CNCSAHAFVGWAKDSCLANGR
C5 IKTIVNVGDHCEGLGVLEDQCGNSDPHKGCVCANASFIGWSHDTCLVNDR
C6 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C7 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C8 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C9 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C10 IKTIVNVGDHCEGLGVLEDKCGNADPHKGCVCANDSFVGWSHDTCLVNDR
C11 ARSMLGVGDHCEGLGVLEDKCGGSNT---CNCSAHAFVGWAKDSCLANGR
C12 ARSMLGVGDHCEGLGILEDKCGGSNI---CNCSADAFVGWAKDSCLSNDR
C13 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C14 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C15 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C16 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
C17 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
:.*********:***:**.:: * *: :*:**: *:** :.*
C1 CHIFSNLMLNGINSGTTCSTDFQLPNTEVVTGVCVKYDLYGITGQGVFKE
C2 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C3 CHIFSNLLLNGINSGTTCSTDLQLPNTEVVTGVCVKYHLFGITGQGVFKE
C4 CHIFSNLMLNGINSGTTCSMDLQLPNTEVVTGVCVKYDLYGITGQGIFKE
C5 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGVCVRYDLYGITGQGVFKE
C6 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C7 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C8 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C9 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C10 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGVCVRYDLYGITGQGVFKE
C11 CHIFSNLMLNGINSGTTCSMDLQLPNTEVVTGVCVKYDLYGITGQGIFKE
C12 CHIFSNLMLNGINSGTTCSTDLQLPNTEVVTGVCVKYDLYGITGQGVFKE
C13 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C14 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C15 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C16 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
C17 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
*:**:*::*********** *:**********:**:*.*:******:***
C1 VKADYYNSWQNLLYDVNGNLNGFRDSVTNKTYLLRSCYSGRVSAAYHQDA
C2 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C3 VKADYYHSWQNLLYDVNGNLEGFRDIITNKTYTIRSCYSGRVSAAYHQDA
C4 VKADYYHSWQNLLYDVNGNLIGFRDFVANKSYTIRSCYSGRVSAAYHQDA
C5 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHSDA
C6 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C7 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C8 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C9 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C10 AKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHSDA
C11 VKADYYHSWQNLLYDVNGNLIGFRDFVANKSYTIRSCYSGRVSAAYHQDA
C12 VKADYYNSWQNLLYDVNGNLNGFRDIVTNKTYLLRSCYSGRVSAAYHQDA
C13 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C14 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C15 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C16 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
C17 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
.*****:***.********* **** :**:* :***********:*.**
C1 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVINADNSTEQSVDA
C2 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C3 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVAV
C4 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVDA
C5 PEPALLYRNINCGFVFNNNISREENPLTYFDSYLGCVVNADNHTDQALPN
C6 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C7 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C8 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C9 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C10 SEPALLYRNINCSFVFNNNISREENPLTYFDSYLGCVVNADNHTEQALPN
C11 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVDA
C12 PEPALLYRNLKCDYVFNNNISREETPLNYFDNYLGCVVNADNSTEHSVDA
C13 PEPALIYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C14 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C15 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C16 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
C17 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
.****:***::*.:**.*******.**.***.*****:**** *:.::
C1 CDLRMGSGLCVNYSIAHRARRSVSTGYKLTTFEPFTVSIVNDSVESVGGL
C2 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C3 CDLRMGSGLCVNYSTSHRARRSISTGYKLTTFEPFTVSIVNDSVQSVGGL
C4 CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL
C5 CDLRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYTPMLVNDSVQAIDGM
C6 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C7 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C8 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C9 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C10 CDLRMGAGLCVDYSKARRARRSVSTGYRLTTFEPYTPMLVNDSVQAIDGM
C11 CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL
C12 CDLRMGSGLCVNYSTAHRARRSVSTGYKLTTFEPFTVSIVNDSVESVGGL
C13 CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL
C14 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C15 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C16 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
C17 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
******:****:** ::**: *:****:******:* :*****:::.*:
C1 YEMQIPTNFTIASHQEFIQTRSPKVTIDCAAFVCGDYTACRQQLVDYGSF
C2 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C3 YEMQIPINFTIGQHQEFIQTRAPKVTIDCAAFVCGDYTACRQQLVEYGSF
C4 YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF
C5 YDMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNSVCRQQLVEYGSF
C6 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C7 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C8 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C9 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C10 YEMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNSVCRQQLVEYGSF
C11 YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF
C12 YEMQIPTNFTIASQQEFIQTRSPKVTIDCAAFVCGDYTVCRQQLVDYGSF
C13 YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF
C14 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C15 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C16 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
C17 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
*::*** ****. ::**:* *:*************. :.******:****
C1 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLADGISGQIDDINFS
C2 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C3 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLADGIGGQIDDINFS
C4 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS
C5 CENVNSILNEVNNLLDNMQLQVASALMQGVTVSSRLPDGIAGPIDDINFS
C6 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C7 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C8 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C9 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C10 CENVNAILNEVNNLLDNMQLQVASALMQGVTVSSSLPDGIAGPIDDINFS
C11 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS
C12 CDNINAILGEVNNLIDTMQLQVASALIQGVTLNSRLADGISGQIDDINFS
C13 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS
C14 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C15 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C16 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
C17 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
* *:*:**.*****:*.*********:****:.* *.***.* *******
C1 PLLGCLGSDCSE---GTKAAQGRSAIEDVLFDKVKLSDVGFVESYNNCTG
C2 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C3 PLLGCLGSDCGE--GTTAALKGRSVIEDMLFDKVKLSDVGFVEAYNNCTG
C4 PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
C5 PLLGCIGSTCSESENGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C6 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C7 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C8 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C9 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C10 PLLGCIGSTCSESENGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C11 PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
C12 PLLGCLGSYCSE---GTMAVQGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
C13 PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
C14 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C15 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C16 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
C17 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
*****:** *.* * ***.***:**************:******
C1 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV
C2 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C3 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV
C4 GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV
C5 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C6 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C7 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C8 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C9 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C10 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C11 GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV
C12 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV
C13 GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV
C14 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C15 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C16 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
C17 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
*************************.******:***.:*** ********
C1 PFALSVQYRINGLGVTMNVLSENQKMIASSFNNAIGAIQEGFDATNSALA
C2 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C3 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFDATNSALA
C4 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA
C5 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALA
C6 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C7 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C8 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C9 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C10 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALA
C11 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA
C12 PFALSVQYRINGLGVTMNVLSENQKMIASSFNNAIGAIQEGFDATNSALA
C13 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA
C14 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C15 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C16 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
C17 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
**:**************************:****:****:** ******.
C1 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C2 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C3 KIQSVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C4 KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C5 KLQSVVNANAEALNNLLGQLSNRFGAISASLQEILSRLDALEAQVQVDRL
C6 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C7 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C8 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C9 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C10 KIQSVVNANAEALNNLLGQLSNRFGAISASLQEILSRLDALEAQVQVDRL
C11 KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C12 KIQSVVNSNAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C13 KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
C14 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C15 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C16 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
C17 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
*:* ***:********* *****************:**:*:**:.*:***
C1 INGRLTALNAYVSKQLSDMTLIKVSAAQAIEKVNECVKSQSPRINFCGNG
C2 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C3 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSPRINFCGNG
C4 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG
C5 ISGRLTALNAYVSKQLSDSTLIKFSAAQAIEKVNECVKSQTMRINFCGSG
C6 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C7 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C8 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C9 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C10 INGRLTALNAYVSKQLSDSTLIKFSAAHAIEKVNECVKSQTMRINFCGSG
C11 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG
C12 INGRLTALNAYVSKHLSDMTLIKVSAAQAIEKVNECVKSQSPRINFCGNG
C13 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG
C14 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C15 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C16 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
C17 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
*.*********:**:*** **:*.***:************: ******.*
C1 NHILSLVQNAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF
C2 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C3 NHILSLVQSAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF
C4 NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF
C5 NHILSLVQNAPYGLYFIHFSYVPTSFTTARVSPGLCIAGDRGLAPKAGYF
C6 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C7 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C8 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C9 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C10 NHILSLVQNAPYGLYFIHFSYVPTSFTTARVSPGLCIAGDRGLAPKAGYF
C11 NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF
C12 NHILSLVQNAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF
C13 NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF
C14 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C15 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C16 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
C17 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
********.************** ****..*******:************
C1 VQDHGEWKFTGSNYYYPESIIDKNSVVMSSCAVNYTKAPEVFLNTSITNL
C2 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C3 VQDNGEWKFTGSGYYYPEPINDKNSVVMSSCAVNYTKAPEVFLNTSIPNL
C4 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL
C5 VQDNGEWKFTGSGYYYPEPITDKNSVVMSSCAVNYTKAPEVFLNTSIPNL
C6 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C7 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C8 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C9 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C10 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAVNYTKAPEVFLNTSIPNL
C11 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL
C12 VQDHGEWKFTGSNYYYPESITDKNSVVMSSCAVNYTKAPEVFLNTSITNL
C13 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL
C14 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C15 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C16 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
C17 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
***.********.*****.* *****:*****.**************.*
C1 PDFKEELDKWFKNQTSIVPDLSFDIGKLNVTFLDLSYEMNRIQDAIKNLN
C2 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C3 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQESIKKLN
C4 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN
C5 SDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQDAIKKLN
C6 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C7 PDFKEVLDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C8 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C9 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C10 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQDAINKLN
C11 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN
C12 PDFKEELDKWFKNQTSIVPDLSFDIGKLNVTFLDLSYEMNRIQDAIKNLN
C13 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN
C14 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C15 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C16 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
C17 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
.**** ***********.****:*: *****:***: ******::*::**
C1 ESYINLKEIGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C2 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C3 ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGSCC
C4 ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C5 ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGLCC
C6 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C7 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C8 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C9 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C10 ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGSCC
C11 ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C12 ESYINLKEIGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C13 ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C14 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C15 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C16 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
C17 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
*******::************:************************* **
C1 FKKCGNCCDEYGGRQAGIVIHNISSHED
C2 FKKCGNCCDEYGGHQDSIVIHNISSHED
C3 FKKCGNCCDEYGGHQDSIVIHNISSHED
C4 FKKCGNCCDECGGHQDSIVIHNISSHED
C5 FKKCGNCCDEYGGHQDSIVIHNISSHED
C6 FKKCGNCCDEYGGHQDSIVIHNISSHED
C7 FKKCGNCCDEYGGHQDSIVIHNISSHED
C8 FKKCGNCCDEYGGHQDSIVIHNISSHED
C9 FKKCGNCCDEYGGHQDSIVIHNISSHED
C10 FKKCGSCCDEYGGHQDSIVIHNISSHEG
C11 FKKCGNCCDECGGHQDSIVIHNISSHED
C12 FKKCGNCCDEYGGRQAGIVIHNISSHED
C13 FKKCGNCCDECGGHQDSIVIHNISSHED
C14 FKKCGNCCDEYGGHQDSIVIHNISSHED
C15 FKKCGNCCDEYGGHQDSIVIHNISSHED
C16 FKKCGNCCDEYGGHQDSIVIHNISSHED
C17 FKKCGNCCDEYGGHQDSIVIHNISSHED
*****.**** **:* .**********.
-- Starting log on Wed Nov 02 22:16:15 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result/gapped_alignment/fubar,A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 17 taxa and 4134 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C11
Taxon 4 -> C12
Taxon 5 -> C13
Taxon 6 -> C14
Taxon 7 -> C15
Taxon 8 -> C16
Taxon 9 -> C17
Taxon 10 -> C2
Taxon 11 -> C3
Taxon 12 -> C4
Taxon 13 -> C5
Taxon 14 -> C6
Taxon 15 -> C7
Taxon 16 -> C8
Taxon 17 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1667427377
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 291247243
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 9044270117
Seed = 433574469
Swapseed = 1667427377
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 223 unique site patterns
Division 2 has 164 unique site patterns
Division 3 has 461 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -30939.307351 -- 54.852219
Chain 2 -- -26857.548108 -- 54.852219
Chain 3 -- -29477.221100 -- 54.852219
Chain 4 -- -31010.647259 -- 54.852219
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -30664.224453 -- 54.852219
Chain 2 -- -27373.341462 -- 54.852219
Chain 3 -- -29417.533732 -- 54.852219
Chain 4 -- -27462.320889 -- 54.852219
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-30939.307] (-26857.548) (-29477.221) (-31010.647) * [-30664.224] (-27373.341) (-29417.534) (-27462.321)
1000 -- (-16220.035) [-16055.504] (-16060.040) (-16097.554) * (-16025.845) (-16033.129) [-16014.024] (-16033.002) -- 0:49:57
2000 -- [-15669.874] (-15669.638) (-15686.709) (-15701.755) * [-15624.087] (-15775.498) (-15668.714) (-15708.774) -- 0:49:54
3000 -- (-15606.283) (-15635.669) (-15602.355) [-15590.378] * (-15590.199) [-15597.027] (-15641.397) (-15665.038) -- 0:55:23
4000 -- (-15591.515) (-15608.150) (-15587.197) [-15588.758] * (-15591.794) [-15586.450] (-15598.772) (-15633.661) -- 0:53:57
5000 -- [-15581.409] (-15608.096) (-15577.129) (-15590.616) * [-15584.368] (-15575.731) (-15610.541) (-15609.956) -- 0:53:04
Average standard deviation of split frequencies: 0.084803
6000 -- [-15577.456] (-15606.067) (-15581.414) (-15583.739) * [-15588.610] (-15588.176) (-15603.548) (-15580.964) -- 0:55:13
7000 -- (-15580.676) (-15610.639) [-15578.251] (-15582.785) * (-15580.739) (-15578.968) (-15582.934) [-15572.468] -- 0:54:22
8000 -- (-15586.086) (-15621.333) (-15582.392) [-15577.515] * (-15579.054) (-15590.298) (-15593.435) [-15583.207] -- 0:53:44
9000 -- (-15577.515) (-15607.758) (-15586.064) [-15579.798] * [-15578.725] (-15592.863) (-15578.522) (-15593.079) -- 0:55:03
10000 -- [-15572.136] (-15593.898) (-15581.368) (-15588.770) * (-15585.847) (-15593.736) [-15576.603] (-15585.245) -- 0:54:27
Average standard deviation of split frequencies: 0.052229
11000 -- [-15581.556] (-15587.208) (-15586.284) (-15581.113) * (-15592.508) (-15583.923) [-15570.941] (-15593.736) -- 0:53:56
12000 -- [-15581.262] (-15581.808) (-15582.645) (-15586.761) * [-15580.481] (-15592.048) (-15574.669) (-15576.507) -- 0:54:53
13000 -- (-15580.998) (-15582.164) (-15582.763) [-15583.288] * [-15587.288] (-15584.245) (-15579.322) (-15586.840) -- 0:54:24
14000 -- (-15586.075) [-15574.538] (-15570.000) (-15582.661) * (-15584.933) (-15586.726) [-15579.207] (-15579.328) -- 0:53:59
15000 -- (-15588.442) (-15575.346) [-15581.158] (-15584.051) * (-15583.158) [-15577.722] (-15592.361) (-15576.739) -- 0:53:37
Average standard deviation of split frequencies: 0.043816
16000 -- [-15571.724] (-15578.587) (-15586.629) (-15590.579) * (-15590.072) (-15582.205) (-15587.327) [-15576.672] -- 0:54:19
17000 -- (-15589.170) (-15581.863) (-15608.377) [-15571.135] * (-15585.943) [-15581.868] (-15577.761) (-15578.116) -- 0:53:58
18000 -- (-15583.563) (-15597.863) (-15579.773) [-15574.742] * [-15578.803] (-15587.890) (-15581.532) (-15577.796) -- 0:53:38
19000 -- (-15591.364) (-15589.601) [-15585.082] (-15582.688) * (-15591.306) (-15585.837) (-15587.327) [-15572.078] -- 0:54:12
20000 -- (-15576.122) (-15589.085) [-15583.810] (-15603.148) * (-15586.167) [-15573.647] (-15576.687) (-15581.457) -- 0:53:54
Average standard deviation of split frequencies: 0.039103
21000 -- (-15577.794) (-15593.968) [-15574.460] (-15585.807) * (-15579.167) (-15588.521) (-15579.136) [-15578.708] -- 0:54:23
22000 -- (-15583.057) (-15581.464) [-15578.323] (-15592.948) * (-15576.254) (-15586.897) (-15586.182) [-15573.025] -- 0:54:05
23000 -- (-15579.226) (-15591.194) [-15591.738] (-15579.069) * (-15582.765) (-15582.569) [-15588.643] (-15588.016) -- 0:53:48
24000 -- (-15591.531) (-15589.550) [-15585.140] (-15576.049) * (-15582.951) (-15583.491) (-15586.624) [-15575.080] -- 0:54:13
25000 -- (-15605.012) (-15578.320) (-15578.985) [-15579.459] * (-15576.172) (-15588.538) [-15581.156] (-15580.297) -- 0:53:57
Average standard deviation of split frequencies: 0.029412
26000 -- (-15573.793) [-15582.717] (-15584.998) (-15584.445) * (-15585.843) (-15585.544) [-15580.261] (-15576.223) -- 0:53:41
27000 -- (-15584.435) [-15579.959] (-15576.718) (-15590.124) * (-15580.832) (-15587.471) (-15578.327) [-15585.464] -- 0:54:03
28000 -- (-15580.936) (-15577.561) (-15586.535) [-15582.493] * [-15573.231] (-15593.883) (-15568.923) (-15581.793) -- 0:53:48
29000 -- (-15582.870) (-15577.592) [-15578.997] (-15593.448) * [-15587.993] (-15580.656) (-15570.550) (-15597.996) -- 0:54:07
30000 -- (-15586.431) (-15601.806) [-15584.491] (-15595.229) * [-15586.225] (-15577.963) (-15579.553) (-15595.310) -- 0:53:53
Average standard deviation of split frequencies: 0.034868
31000 -- (-15584.777) (-15591.382) (-15585.353) [-15573.992] * (-15580.255) (-15579.070) [-15580.456] (-15579.611) -- 0:53:39
32000 -- (-15577.805) (-15604.360) [-15579.038] (-15591.602) * (-15588.488) [-15578.409] (-15578.536) (-15596.494) -- 0:53:56
33000 -- [-15579.966] (-15597.341) (-15571.297) (-15571.382) * (-15586.893) (-15589.452) (-15590.724) [-15587.647] -- 0:53:43
34000 -- (-15581.298) (-15591.852) (-15576.449) [-15578.020] * (-15593.888) (-15593.855) (-15589.383) [-15589.830] -- 0:53:30
35000 -- (-15581.383) [-15587.535] (-15585.511) (-15580.498) * (-15591.795) (-15587.141) [-15590.490] (-15578.860) -- 0:53:45
Average standard deviation of split frequencies: 0.033240
36000 -- (-15589.048) (-15586.812) [-15585.272] (-15586.980) * [-15578.660] (-15596.512) (-15579.715) (-15584.217) -- 0:53:33
37000 -- (-15587.741) (-15576.882) (-15580.390) [-15583.292] * (-15591.265) [-15579.819] (-15588.492) (-15581.801) -- 0:53:21
38000 -- [-15579.357] (-15592.439) (-15587.840) (-15576.941) * (-15588.106) (-15583.016) [-15572.447] (-15596.550) -- 0:53:35
39000 -- (-15588.259) (-15600.172) (-15603.668) [-15582.882] * [-15581.160] (-15583.018) (-15586.845) (-15595.443) -- 0:53:23
40000 -- (-15579.906) (-15603.323) [-15584.808] (-15573.758) * (-15595.305) [-15580.146] (-15593.424) (-15593.658) -- 0:53:36
Average standard deviation of split frequencies: 0.028980
41000 -- [-15577.557] (-15591.041) (-15581.115) (-15588.486) * [-15582.693] (-15574.210) (-15584.769) (-15590.235) -- 0:53:24
42000 -- [-15587.676] (-15596.833) (-15596.096) (-15595.507) * (-15583.788) (-15590.026) (-15580.578) [-15584.655] -- 0:53:13
43000 -- (-15592.411) (-15582.845) (-15577.218) [-15582.919] * (-15586.365) [-15577.791] (-15585.103) (-15604.600) -- 0:53:24
44000 -- [-15586.171] (-15588.783) (-15584.598) (-15594.898) * (-15588.644) [-15588.505] (-15593.112) (-15604.008) -- 0:53:13
45000 -- (-15586.877) (-15599.453) [-15575.841] (-15588.413) * (-15589.767) (-15575.812) (-15593.546) [-15579.573] -- 0:53:24
Average standard deviation of split frequencies: 0.022936
46000 -- (-15582.812) (-15589.788) (-15578.182) [-15581.590] * (-15592.724) (-15588.197) [-15584.303] (-15597.043) -- 0:53:13
47000 -- (-15585.790) (-15579.887) [-15587.551] (-15573.107) * (-15590.395) (-15583.117) (-15592.910) [-15582.062] -- 0:53:23
48000 -- (-15586.535) (-15577.390) (-15579.981) [-15573.987] * [-15584.310] (-15589.237) (-15596.950) (-15579.911) -- 0:53:13
49000 -- [-15578.861] (-15585.384) (-15583.047) (-15576.085) * (-15600.612) (-15587.886) (-15578.387) [-15569.954] -- 0:53:02
50000 -- (-15585.513) (-15584.547) (-15580.012) [-15585.857] * (-15583.572) (-15583.708) [-15569.796] (-15599.425) -- 0:53:12
Average standard deviation of split frequencies: 0.021232
51000 -- (-15580.243) (-15593.103) [-15574.541] (-15577.551) * (-15582.083) (-15589.057) (-15574.483) [-15581.162] -- 0:53:01
52000 -- (-15586.948) (-15592.999) (-15589.364) [-15572.127] * (-15584.068) (-15584.973) [-15575.839] (-15581.140) -- 0:52:52
53000 -- [-15581.558] (-15591.567) (-15598.831) (-15578.995) * (-15592.580) (-15589.492) (-15587.199) [-15578.794] -- 0:52:42
54000 -- (-15582.234) [-15580.569] (-15590.117) (-15590.520) * (-15595.474) (-15584.308) (-15592.524) [-15581.145] -- 0:52:50
55000 -- (-15586.464) (-15569.095) (-15592.823) [-15587.092] * [-15583.616] (-15577.538) (-15588.741) (-15574.511) -- 0:52:41
Average standard deviation of split frequencies: 0.020577
56000 -- (-15586.736) [-15582.245] (-15581.752) (-15592.486) * (-15579.684) (-15583.027) (-15582.923) [-15569.895] -- 0:52:32
57000 -- (-15600.902) (-15585.130) (-15577.596) [-15575.972] * (-15589.366) (-15575.434) [-15586.302] (-15581.791) -- 0:52:39
58000 -- (-15589.099) (-15585.379) (-15584.743) [-15582.102] * (-15593.099) (-15582.888) (-15600.479) [-15581.861] -- 0:52:30
59000 -- (-15594.446) (-15581.392) (-15581.430) [-15581.200] * (-15606.684) (-15574.348) [-15577.730] (-15576.633) -- 0:52:21
60000 -- [-15577.980] (-15569.132) (-15593.146) (-15590.706) * (-15588.601) (-15582.658) (-15588.461) [-15573.747] -- 0:52:13
Average standard deviation of split frequencies: 0.019858
61000 -- [-15579.989] (-15584.369) (-15591.096) (-15586.940) * (-15586.260) [-15580.090] (-15587.457) (-15577.981) -- 0:52:20
62000 -- (-15580.581) [-15581.351] (-15592.931) (-15583.389) * [-15588.180] (-15605.139) (-15592.988) (-15581.057) -- 0:52:11
63000 -- [-15579.317] (-15589.895) (-15583.164) (-15588.873) * (-15592.166) [-15595.346] (-15579.509) (-15580.199) -- 0:52:18
64000 -- [-15584.558] (-15582.700) (-15588.973) (-15586.270) * (-15576.404) (-15589.441) (-15589.077) [-15574.552] -- 0:52:09
65000 -- (-15580.242) (-15570.380) [-15580.304] (-15595.303) * (-15586.814) (-15593.211) [-15572.582] (-15608.194) -- 0:52:15
Average standard deviation of split frequencies: 0.019172
66000 -- (-15597.449) (-15581.092) (-15594.719) [-15585.466] * [-15589.039] (-15580.393) (-15594.822) (-15587.013) -- 0:52:07
67000 -- [-15589.515] (-15579.336) (-15599.853) (-15592.453) * (-15588.441) (-15583.286) (-15598.127) [-15570.880] -- 0:51:59
68000 -- (-15610.137) (-15592.431) [-15586.161] (-15594.389) * (-15581.196) (-15576.712) [-15591.670] (-15584.901) -- 0:51:51
69000 -- [-15584.920] (-15584.530) (-15584.293) (-15593.028) * (-15580.203) (-15584.610) (-15584.170) [-15587.127] -- 0:51:56
70000 -- (-15581.926) (-15586.097) [-15590.952] (-15588.715) * (-15593.944) (-15578.540) (-15581.944) [-15580.109] -- 0:51:48
Average standard deviation of split frequencies: 0.019827
71000 -- [-15580.313] (-15593.613) (-15587.461) (-15593.263) * (-15593.336) (-15578.645) [-15578.592] (-15583.873) -- 0:51:41
72000 -- (-15586.158) (-15586.386) (-15580.479) [-15580.002] * (-15584.526) (-15588.978) (-15591.002) [-15589.427] -- 0:51:46
73000 -- (-15591.212) [-15577.537] (-15589.642) (-15592.273) * [-15582.773] (-15586.340) (-15582.394) (-15579.374) -- 0:51:38
74000 -- [-15578.049] (-15583.586) (-15580.766) (-15599.847) * [-15583.702] (-15576.448) (-15585.287) (-15591.985) -- 0:51:30
75000 -- (-15576.568) (-15581.170) [-15576.320] (-15592.534) * (-15578.929) (-15593.469) [-15576.482] (-15599.330) -- 0:51:23
Average standard deviation of split frequencies: 0.017770
76000 -- (-15589.734) (-15584.432) [-15575.903] (-15588.622) * (-15586.550) (-15586.527) (-15584.532) [-15575.701] -- 0:51:28
77000 -- (-15579.415) [-15574.281] (-15585.932) (-15594.993) * (-15582.302) (-15579.749) [-15582.298] (-15578.843) -- 0:51:20
78000 -- (-15570.950) (-15593.070) (-15581.637) [-15577.481] * (-15587.185) (-15569.449) (-15580.631) [-15579.291] -- 0:51:25
79000 -- [-15567.459] (-15591.777) (-15587.315) (-15577.188) * (-15578.519) (-15579.531) (-15583.328) [-15580.433] -- 0:51:17
80000 -- (-15594.796) (-15584.239) (-15583.658) [-15578.556] * (-15577.675) [-15590.157] (-15586.063) (-15579.926) -- 0:51:10
Average standard deviation of split frequencies: 0.016268
81000 -- (-15584.039) [-15588.183] (-15581.092) (-15594.324) * [-15579.558] (-15597.923) (-15600.311) (-15586.679) -- 0:51:14
82000 -- (-15599.168) [-15588.620] (-15582.362) (-15577.984) * (-15583.030) (-15587.897) (-15591.213) [-15578.908] -- 0:51:07
83000 -- (-15577.049) [-15572.640] (-15583.877) (-15590.773) * (-15590.806) [-15581.187] (-15590.930) (-15588.854) -- 0:51:11
84000 -- [-15586.089] (-15584.645) (-15577.841) (-15585.724) * (-15570.180) [-15588.348] (-15599.904) (-15599.691) -- 0:51:04
85000 -- (-15583.948) (-15586.140) [-15584.375] (-15591.460) * [-15585.750] (-15594.168) (-15596.609) (-15589.799) -- 0:50:57
Average standard deviation of split frequencies: 0.020916
86000 -- (-15578.616) (-15581.414) (-15582.097) [-15582.197] * (-15584.039) (-15584.892) [-15593.789] (-15581.666) -- 0:51:00
87000 -- [-15587.150] (-15575.766) (-15579.824) (-15581.026) * (-15574.504) (-15589.692) (-15577.254) [-15588.018] -- 0:50:53
88000 -- (-15584.591) [-15583.642] (-15585.999) (-15593.344) * (-15581.225) (-15591.989) (-15578.060) [-15581.280] -- 0:50:46
89000 -- (-15583.214) (-15578.657) [-15581.304] (-15581.242) * (-15594.508) [-15590.909] (-15570.941) (-15591.382) -- 0:50:50
90000 -- (-15589.145) [-15577.661] (-15591.501) (-15584.023) * (-15584.974) (-15594.171) (-15575.343) [-15583.165] -- 0:50:43
Average standard deviation of split frequencies: 0.020524
91000 -- (-15596.053) (-15595.803) [-15587.407] (-15593.555) * (-15592.671) (-15579.194) (-15570.410) [-15594.142] -- 0:50:36
92000 -- (-15597.210) (-15586.262) (-15588.011) [-15583.364] * (-15578.290) (-15588.539) (-15581.465) [-15586.720] -- 0:50:29
93000 -- (-15595.451) (-15576.554) [-15575.412] (-15575.250) * [-15575.955] (-15581.117) (-15581.492) (-15591.133) -- 0:50:33
94000 -- (-15581.558) (-15601.607) (-15586.376) [-15578.734] * [-15584.045] (-15582.347) (-15571.873) (-15588.275) -- 0:50:26
95000 -- (-15579.532) (-15595.653) [-15578.179] (-15591.027) * (-15576.307) (-15592.518) (-15580.092) [-15583.282] -- 0:50:29
Average standard deviation of split frequencies: 0.021500
96000 -- (-15588.312) (-15589.608) (-15584.116) [-15581.055] * (-15588.553) (-15577.794) [-15585.736] (-15596.625) -- 0:50:22
97000 -- (-15595.502) (-15582.330) [-15595.441] (-15578.994) * (-15581.018) (-15582.617) [-15594.796] (-15583.245) -- 0:50:25
98000 -- (-15589.625) (-15580.542) [-15576.790] (-15587.020) * (-15587.573) (-15588.621) (-15591.351) [-15581.721] -- 0:50:18
99000 -- (-15608.238) (-15583.931) [-15574.521] (-15578.281) * (-15577.500) (-15606.345) [-15583.783] (-15576.915) -- 0:50:12
100000 -- (-15597.595) (-15582.936) [-15586.445] (-15571.092) * (-15590.654) (-15593.682) (-15591.448) [-15586.100] -- 0:50:15
Average standard deviation of split frequencies: 0.020943
101000 -- (-15589.197) (-15588.661) (-15588.038) [-15581.848] * (-15579.947) (-15603.382) [-15578.378] (-15592.302) -- 0:50:08
102000 -- (-15579.110) (-15579.953) (-15598.004) [-15583.022] * (-15582.213) [-15578.846] (-15583.260) (-15589.225) -- 0:50:02
103000 -- [-15582.282] (-15582.134) (-15581.351) (-15576.388) * (-15594.836) (-15599.799) (-15584.822) [-15576.861] -- 0:49:55
104000 -- (-15589.895) (-15600.548) [-15573.241] (-15578.365) * (-15590.423) [-15579.330] (-15583.753) (-15574.162) -- 0:49:58
105000 -- (-15576.183) (-15578.636) [-15575.581] (-15588.809) * (-15575.131) (-15582.325) (-15583.846) [-15578.279] -- 0:49:51
Average standard deviation of split frequencies: 0.021096
106000 -- (-15595.019) [-15581.878] (-15579.497) (-15589.905) * (-15578.025) (-15582.026) [-15571.249] (-15591.119) -- 0:49:45
107000 -- (-15587.928) [-15572.928] (-15581.218) (-15590.173) * [-15577.303] (-15580.279) (-15596.387) (-15581.580) -- 0:49:47
108000 -- (-15580.127) [-15581.650] (-15588.981) (-15588.221) * (-15591.978) (-15583.538) [-15583.074] (-15582.267) -- 0:49:41
109000 -- (-15585.042) (-15580.259) (-15577.857) [-15577.136] * (-15586.956) (-15582.853) [-15580.137] (-15596.073) -- 0:49:35
110000 -- (-15588.976) (-15584.120) (-15601.579) [-15594.454] * (-15603.316) (-15591.509) [-15582.951] (-15591.839) -- 0:49:37
Average standard deviation of split frequencies: 0.021183
111000 -- (-15596.463) (-15589.778) (-15587.488) [-15588.075] * (-15581.922) (-15584.144) [-15588.036] (-15599.497) -- 0:49:31
112000 -- (-15600.423) [-15571.422] (-15578.806) (-15575.976) * (-15585.277) (-15591.996) (-15583.911) [-15573.755] -- 0:49:25
113000 -- (-15590.086) (-15586.788) (-15583.589) [-15579.022] * (-15580.429) [-15583.951] (-15589.350) (-15578.417) -- 0:49:19
114000 -- (-15575.530) [-15579.887] (-15586.113) (-15575.326) * (-15580.803) [-15581.076] (-15588.718) (-15576.787) -- 0:49:21
115000 -- (-15595.698) [-15584.022] (-15581.909) (-15581.067) * (-15577.314) (-15581.932) (-15588.419) [-15589.923] -- 0:49:15
Average standard deviation of split frequencies: 0.022351
116000 -- (-15578.235) (-15577.145) [-15584.376] (-15583.101) * [-15576.115] (-15589.909) (-15591.283) (-15579.979) -- 0:49:09
117000 -- (-15590.649) [-15576.932] (-15584.207) (-15580.553) * [-15577.587] (-15583.857) (-15585.432) (-15580.436) -- 0:49:03
118000 -- [-15584.857] (-15577.538) (-15593.444) (-15580.420) * (-15590.965) (-15577.533) (-15577.061) [-15572.612] -- 0:49:04
119000 -- (-15602.002) [-15579.901] (-15580.788) (-15589.656) * (-15595.554) (-15574.745) (-15587.204) [-15581.429] -- 0:48:59
120000 -- (-15576.855) (-15593.288) [-15575.499] (-15581.550) * (-15584.027) (-15592.950) [-15585.376] (-15578.807) -- 0:48:53
Average standard deviation of split frequencies: 0.022618
121000 -- [-15583.008] (-15579.817) (-15582.751) (-15586.884) * (-15584.093) (-15575.483) (-15577.676) [-15575.510] -- 0:48:54
122000 -- [-15593.754] (-15594.371) (-15590.682) (-15588.861) * [-15588.060] (-15585.980) (-15591.144) (-15582.310) -- 0:48:49
123000 -- [-15592.620] (-15581.584) (-15579.306) (-15577.109) * (-15589.853) [-15580.660] (-15579.408) (-15591.469) -- 0:48:43
124000 -- (-15589.306) [-15575.455] (-15589.463) (-15587.029) * [-15588.078] (-15589.050) (-15576.794) (-15580.087) -- 0:48:37
125000 -- [-15587.327] (-15577.103) (-15589.141) (-15579.028) * (-15577.356) (-15596.325) [-15590.969] (-15581.892) -- 0:48:39
Average standard deviation of split frequencies: 0.020817
126000 -- (-15581.416) (-15576.940) (-15587.264) [-15590.840] * (-15578.017) (-15583.726) [-15578.095] (-15598.716) -- 0:48:33
127000 -- (-15589.789) [-15579.189] (-15595.020) (-15591.381) * (-15580.050) [-15576.476] (-15578.155) (-15594.607) -- 0:48:27
128000 -- (-15580.767) [-15582.415] (-15583.467) (-15593.967) * [-15595.273] (-15598.705) (-15579.415) (-15592.516) -- 0:48:22
129000 -- [-15583.567] (-15585.099) (-15580.478) (-15592.506) * (-15588.880) (-15605.813) (-15589.453) [-15580.509] -- 0:48:23
130000 -- (-15583.193) [-15578.978] (-15592.640) (-15578.123) * (-15596.431) (-15588.316) [-15575.184] (-15589.681) -- 0:48:17
Average standard deviation of split frequencies: 0.020127
131000 -- [-15580.439] (-15590.414) (-15598.138) (-15577.202) * (-15581.467) (-15588.198) [-15581.274] (-15591.347) -- 0:48:12
132000 -- (-15587.796) (-15587.725) [-15574.678] (-15593.859) * (-15586.063) (-15578.733) (-15578.431) [-15578.214] -- 0:48:06
133000 -- (-15589.494) (-15585.515) (-15590.121) [-15586.463] * [-15575.636] (-15595.348) (-15582.647) (-15587.722) -- 0:48:07
134000 -- (-15585.285) [-15586.947] (-15581.971) (-15588.000) * [-15573.501] (-15609.196) (-15576.844) (-15598.352) -- 0:48:02
135000 -- [-15576.292] (-15582.255) (-15585.266) (-15585.437) * (-15577.504) (-15583.951) (-15586.860) [-15587.487] -- 0:47:56
Average standard deviation of split frequencies: 0.020159
136000 -- (-15575.116) (-15583.226) [-15594.641] (-15588.569) * (-15595.807) [-15577.470] (-15591.005) (-15588.665) -- 0:47:51
137000 -- [-15578.624] (-15586.516) (-15594.783) (-15572.683) * (-15582.089) (-15595.531) (-15586.458) [-15586.976] -- 0:47:52
138000 -- (-15581.153) (-15579.397) (-15595.962) [-15592.013] * (-15585.291) (-15590.531) (-15605.575) [-15583.095] -- 0:47:47
139000 -- [-15577.719] (-15584.614) (-15596.413) (-15583.122) * [-15578.401] (-15580.729) (-15579.755) (-15580.132) -- 0:47:41
140000 -- (-15579.997) (-15580.713) (-15571.645) [-15573.606] * [-15582.959] (-15582.761) (-15580.742) (-15592.420) -- 0:47:42
Average standard deviation of split frequencies: 0.021342
141000 -- (-15585.904) (-15585.601) [-15577.524] (-15595.963) * (-15583.005) (-15599.022) [-15579.769] (-15588.518) -- 0:47:37
142000 -- [-15586.297] (-15585.163) (-15579.662) (-15576.786) * (-15600.535) (-15591.558) [-15584.094] (-15591.772) -- 0:47:31
143000 -- (-15588.248) (-15586.144) (-15585.417) [-15573.838] * (-15588.419) (-15585.938) [-15588.224] (-15590.954) -- 0:47:32
144000 -- (-15589.211) [-15598.277] (-15587.472) (-15575.603) * (-15580.690) (-15575.318) [-15579.167] (-15591.801) -- 0:47:27
145000 -- [-15580.334] (-15580.595) (-15596.795) (-15572.642) * (-15576.198) (-15589.761) [-15574.821] (-15589.364) -- 0:47:22
Average standard deviation of split frequencies: 0.018523
146000 -- (-15576.391) (-15575.815) (-15585.276) [-15584.263] * (-15591.980) (-15570.523) [-15577.704] (-15575.685) -- 0:47:22
147000 -- [-15579.307] (-15587.527) (-15588.778) (-15590.485) * (-15581.290) [-15585.403] (-15586.059) (-15581.903) -- 0:47:17
148000 -- (-15579.733) (-15588.098) [-15587.800] (-15592.773) * [-15591.518] (-15596.844) (-15591.778) (-15589.021) -- 0:47:12
149000 -- (-15586.213) [-15577.517] (-15575.404) (-15591.657) * (-15585.386) (-15598.055) [-15578.075] (-15589.941) -- 0:47:07
150000 -- (-15580.156) (-15585.266) (-15571.573) [-15581.246] * (-15582.851) (-15582.008) [-15580.564] (-15589.977) -- 0:47:07
Average standard deviation of split frequencies: 0.017730
151000 -- (-15585.440) [-15575.182] (-15577.773) (-15580.338) * (-15582.359) (-15604.607) [-15573.841] (-15591.685) -- 0:47:02
152000 -- (-15602.381) [-15571.682] (-15586.061) (-15577.788) * (-15579.674) (-15591.499) [-15568.659] (-15588.279) -- 0:46:57
153000 -- (-15580.372) [-15582.678] (-15587.334) (-15588.122) * [-15581.054] (-15581.376) (-15584.145) (-15603.700) -- 0:46:52
154000 -- (-15576.530) (-15585.535) [-15574.445] (-15584.244) * (-15590.937) [-15580.317] (-15593.177) (-15586.459) -- 0:46:52
155000 -- (-15581.167) [-15576.551] (-15587.707) (-15591.466) * [-15592.141] (-15599.552) (-15576.100) (-15594.682) -- 0:46:47
Average standard deviation of split frequencies: 0.017879
156000 -- (-15574.324) [-15587.498] (-15598.050) (-15584.660) * (-15588.170) (-15590.484) [-15584.915] (-15584.430) -- 0:46:42
157000 -- (-15577.296) (-15582.711) (-15586.051) [-15573.240] * (-15591.839) (-15600.348) (-15586.572) [-15578.673] -- 0:46:42
158000 -- [-15576.722] (-15586.176) (-15585.888) (-15590.145) * (-15588.101) (-15587.164) (-15576.816) [-15582.510] -- 0:46:37
159000 -- [-15577.028] (-15582.206) (-15589.044) (-15595.021) * (-15596.472) (-15574.027) [-15582.877] (-15580.767) -- 0:46:38
160000 -- (-15592.095) [-15579.040] (-15595.098) (-15587.559) * [-15573.706] (-15583.298) (-15589.171) (-15586.475) -- 0:46:33
Average standard deviation of split frequencies: 0.017441
161000 -- (-15584.775) [-15579.184] (-15576.523) (-15600.839) * [-15576.420] (-15590.000) (-15583.457) (-15590.790) -- 0:46:27
162000 -- (-15608.395) [-15593.299] (-15575.181) (-15584.813) * (-15575.980) (-15608.024) (-15585.447) [-15579.551] -- 0:46:28
163000 -- (-15583.631) (-15586.462) [-15574.480] (-15597.038) * (-15575.224) (-15604.176) [-15573.904] (-15581.854) -- 0:46:23
164000 -- (-15579.352) (-15596.397) [-15584.750] (-15587.442) * (-15602.198) (-15595.695) (-15579.404) [-15580.364] -- 0:46:18
165000 -- (-15592.242) [-15577.114] (-15592.565) (-15586.976) * (-15597.927) (-15610.167) (-15577.030) [-15578.672] -- 0:46:18
Average standard deviation of split frequencies: 0.017729
166000 -- (-15582.344) (-15584.334) (-15582.385) [-15580.477] * [-15584.766] (-15597.767) (-15581.913) (-15578.767) -- 0:46:13
167000 -- (-15583.951) [-15578.321] (-15596.653) (-15578.907) * [-15584.960] (-15597.736) (-15579.059) (-15594.458) -- 0:46:08
168000 -- (-15587.079) (-15577.443) (-15573.174) [-15580.065] * [-15585.391] (-15578.179) (-15592.718) (-15586.891) -- 0:46:03
169000 -- (-15585.970) [-15583.658] (-15586.770) (-15582.608) * (-15585.798) (-15567.475) (-15590.410) [-15579.501] -- 0:46:03
170000 -- (-15587.309) (-15591.166) [-15589.142] (-15590.309) * (-15578.621) (-15590.602) (-15587.321) [-15582.555] -- 0:45:58
Average standard deviation of split frequencies: 0.017767
171000 -- (-15608.205) [-15584.370] (-15587.058) (-15588.576) * (-15596.536) (-15575.538) (-15592.733) [-15580.136] -- 0:45:53
172000 -- (-15589.538) (-15580.596) [-15584.883] (-15583.484) * (-15581.375) (-15589.385) [-15572.972] (-15591.681) -- 0:45:53
173000 -- (-15579.577) (-15592.896) [-15577.011] (-15596.509) * (-15594.933) (-15590.507) [-15579.429] (-15599.731) -- 0:45:53
174000 -- (-15592.857) (-15597.640) [-15578.669] (-15591.657) * [-15580.685] (-15596.221) (-15577.068) (-15583.474) -- 0:45:48
175000 -- (-15581.309) [-15602.116] (-15582.701) (-15586.412) * (-15582.112) (-15595.656) [-15570.727] (-15591.833) -- 0:45:43
Average standard deviation of split frequencies: 0.017374
176000 -- (-15591.408) (-15607.354) (-15578.002) [-15572.885] * (-15584.619) (-15589.700) (-15573.115) [-15583.386] -- 0:45:43
177000 -- (-15592.035) (-15592.720) [-15574.471] (-15582.567) * (-15592.922) (-15600.172) [-15574.733] (-15584.041) -- 0:45:38
178000 -- (-15577.525) [-15585.316] (-15580.877) (-15580.953) * (-15582.425) (-15583.676) (-15584.824) [-15582.275] -- 0:45:33
179000 -- (-15594.334) (-15588.679) (-15580.120) [-15574.328] * (-15581.681) (-15579.915) (-15583.951) [-15584.704] -- 0:45:33
180000 -- (-15581.820) [-15580.724] (-15579.379) (-15586.129) * [-15583.273] (-15590.804) (-15581.610) (-15594.999) -- 0:45:28
Average standard deviation of split frequencies: 0.018488
181000 -- [-15586.892] (-15575.186) (-15578.814) (-15587.854) * (-15580.169) (-15578.146) [-15582.439] (-15578.135) -- 0:45:23
182000 -- [-15575.643] (-15588.757) (-15582.560) (-15588.932) * (-15583.146) (-15576.014) [-15585.182] (-15595.281) -- 0:45:23
183000 -- (-15576.366) [-15581.965] (-15582.295) (-15592.573) * (-15591.933) (-15579.186) (-15589.386) [-15588.296] -- 0:45:18
184000 -- [-15581.512] (-15572.882) (-15585.726) (-15591.068) * (-15592.811) (-15585.706) (-15582.396) [-15584.593] -- 0:45:18
185000 -- (-15588.812) (-15584.057) (-15585.135) [-15588.713] * [-15580.163] (-15584.727) (-15600.710) (-15578.816) -- 0:45:13
Average standard deviation of split frequencies: 0.017673
186000 -- (-15591.664) (-15588.997) [-15582.412] (-15592.005) * (-15578.914) (-15588.488) (-15589.003) [-15580.475] -- 0:45:08
187000 -- (-15587.314) (-15590.753) (-15587.865) [-15579.417] * (-15586.662) (-15593.926) [-15582.753] (-15580.027) -- 0:45:08
188000 -- [-15583.317] (-15597.862) (-15576.651) (-15581.396) * (-15589.701) (-15575.572) [-15587.050] (-15591.521) -- 0:45:03
189000 -- (-15611.170) (-15600.868) [-15585.710] (-15588.123) * (-15585.641) (-15594.563) [-15577.644] (-15583.991) -- 0:45:03
190000 -- (-15584.943) (-15605.711) (-15586.853) [-15576.798] * (-15594.708) (-15594.197) [-15589.884] (-15586.605) -- 0:44:58
Average standard deviation of split frequencies: 0.017775
191000 -- (-15585.331) (-15577.963) [-15570.365] (-15589.094) * [-15582.702] (-15578.389) (-15585.018) (-15583.799) -- 0:44:58
192000 -- [-15582.343] (-15589.592) (-15591.301) (-15579.621) * (-15580.059) [-15576.453] (-15580.482) (-15580.998) -- 0:44:53
193000 -- (-15590.094) [-15574.694] (-15584.139) (-15586.546) * (-15568.796) (-15590.554) (-15592.453) [-15576.691] -- 0:44:48
194000 -- [-15589.935] (-15582.083) (-15584.447) (-15588.926) * (-15588.485) (-15582.903) [-15582.311] (-15587.155) -- 0:44:48
195000 -- (-15577.757) (-15584.883) [-15576.819] (-15585.862) * [-15577.226] (-15585.559) (-15576.158) (-15589.501) -- 0:44:43
Average standard deviation of split frequencies: 0.017216
196000 -- (-15576.164) [-15578.973] (-15577.042) (-15594.865) * [-15589.099] (-15584.819) (-15583.276) (-15593.949) -- 0:44:42
197000 -- (-15581.980) (-15585.567) [-15585.782] (-15588.214) * (-15587.881) (-15594.039) (-15593.673) [-15579.581] -- 0:44:38
198000 -- (-15593.376) (-15593.133) [-15582.079] (-15594.704) * (-15599.466) (-15598.424) [-15580.968] (-15589.050) -- 0:44:33
199000 -- (-15583.994) [-15595.294] (-15587.750) (-15582.824) * (-15588.924) (-15594.858) (-15580.550) [-15583.186] -- 0:44:32
200000 -- (-15576.275) (-15583.478) (-15582.068) [-15578.539] * (-15575.545) (-15588.481) [-15589.968] (-15596.969) -- 0:44:28
Average standard deviation of split frequencies: 0.017270
201000 -- (-15573.869) [-15585.281] (-15569.053) (-15582.580) * (-15590.593) [-15575.755] (-15589.663) (-15589.256) -- 0:44:23
202000 -- [-15582.863] (-15577.966) (-15594.415) (-15582.012) * (-15589.587) [-15581.235] (-15587.393) (-15591.864) -- 0:44:22
203000 -- (-15583.444) [-15577.601] (-15592.388) (-15589.328) * (-15593.934) (-15581.923) (-15597.038) [-15584.764] -- 0:44:17
204000 -- [-15588.825] (-15577.510) (-15576.155) (-15585.220) * (-15587.944) [-15574.830] (-15575.763) (-15583.136) -- 0:44:13
205000 -- (-15590.544) (-15581.933) (-15582.648) [-15586.331] * (-15590.329) [-15593.436] (-15587.054) (-15579.897) -- 0:44:12
Average standard deviation of split frequencies: 0.016681
206000 -- (-15587.952) (-15580.617) [-15577.032] (-15589.650) * (-15585.663) (-15600.615) (-15582.302) [-15577.515] -- 0:44:07
207000 -- (-15585.535) (-15595.064) [-15575.141] (-15582.537) * (-15590.331) (-15573.617) (-15580.455) [-15576.686] -- 0:44:03
208000 -- [-15583.214] (-15587.470) (-15584.564) (-15602.743) * (-15584.971) [-15582.076] (-15586.410) (-15576.085) -- 0:44:02
209000 -- [-15581.112] (-15585.148) (-15583.107) (-15590.782) * (-15581.684) [-15582.105] (-15589.287) (-15589.739) -- 0:43:57
210000 -- (-15568.185) [-15576.227] (-15584.862) (-15591.739) * [-15578.306] (-15587.008) (-15589.347) (-15596.634) -- 0:43:53
Average standard deviation of split frequencies: 0.016510
211000 -- [-15579.297] (-15588.041) (-15581.777) (-15597.149) * (-15596.516) (-15572.762) [-15582.590] (-15590.347) -- 0:43:52
212000 -- (-15584.752) (-15586.897) [-15574.837] (-15585.559) * (-15596.362) (-15584.247) [-15563.526] (-15582.165) -- 0:43:47
213000 -- (-15578.273) (-15580.810) (-15579.925) [-15579.431] * (-15577.175) (-15588.520) [-15589.228] (-15580.980) -- 0:43:47
214000 -- [-15574.016] (-15576.983) (-15586.810) (-15582.239) * [-15575.952] (-15589.337) (-15584.366) (-15592.204) -- 0:43:42
215000 -- (-15592.903) [-15587.311] (-15587.689) (-15587.121) * (-15585.405) (-15588.368) (-15587.431) [-15571.240] -- 0:43:37
Average standard deviation of split frequencies: 0.016221
216000 -- [-15580.460] (-15598.184) (-15579.188) (-15585.716) * (-15585.463) [-15583.745] (-15574.825) (-15586.431) -- 0:43:36
217000 -- (-15589.547) (-15591.682) (-15605.369) [-15581.340] * (-15577.562) (-15586.249) (-15584.998) [-15581.001] -- 0:43:32
218000 -- (-15590.532) (-15584.906) [-15589.924] (-15594.846) * (-15580.674) (-15581.779) (-15583.945) [-15573.598] -- 0:43:27
219000 -- (-15596.068) (-15571.828) (-15585.515) [-15578.260] * (-15590.946) (-15597.175) [-15583.658] (-15586.065) -- 0:43:26
220000 -- (-15588.930) (-15583.098) [-15585.746] (-15578.628) * (-15592.316) (-15582.639) (-15586.967) [-15586.341] -- 0:43:22
Average standard deviation of split frequencies: 0.015300
221000 -- (-15577.212) (-15603.003) (-15584.174) [-15580.590] * (-15589.730) (-15591.601) [-15581.264] (-15582.645) -- 0:43:17
222000 -- (-15590.498) (-15594.031) [-15575.158] (-15597.347) * [-15577.208] (-15582.595) (-15592.538) (-15589.484) -- 0:43:16
223000 -- (-15593.279) (-15584.669) (-15586.889) [-15579.117] * [-15579.613] (-15576.587) (-15579.565) (-15589.085) -- 0:43:12
224000 -- (-15587.565) (-15591.430) [-15577.034] (-15572.275) * (-15588.197) (-15593.266) (-15588.243) [-15584.158] -- 0:43:07
225000 -- (-15589.630) (-15591.383) [-15584.310] (-15581.026) * (-15584.266) [-15590.049] (-15584.068) (-15595.128) -- 0:43:03
Average standard deviation of split frequencies: 0.015334
226000 -- (-15584.763) (-15577.601) (-15587.829) [-15581.673] * (-15579.762) (-15592.609) [-15588.770] (-15585.533) -- 0:43:02
227000 -- (-15600.922) [-15572.389] (-15580.759) (-15599.864) * (-15583.974) [-15587.277] (-15584.077) (-15587.177) -- 0:42:57
228000 -- (-15593.350) (-15575.623) [-15573.752] (-15590.919) * (-15595.088) (-15577.303) [-15576.986] (-15603.902) -- 0:42:53
229000 -- (-15595.526) (-15588.292) [-15586.693] (-15575.589) * [-15587.949] (-15580.978) (-15584.946) (-15585.563) -- 0:42:52
230000 -- [-15587.842] (-15599.997) (-15586.315) (-15588.350) * (-15589.224) (-15580.598) [-15577.961] (-15601.823) -- 0:42:47
Average standard deviation of split frequencies: 0.015543
231000 -- (-15590.398) [-15577.608] (-15582.319) (-15599.711) * (-15616.080) [-15584.018] (-15596.654) (-15583.239) -- 0:42:43
232000 -- (-15585.231) (-15601.162) [-15574.195] (-15593.153) * (-15602.342) (-15585.748) (-15577.681) [-15592.546] -- 0:42:38
233000 -- (-15588.102) (-15597.219) (-15581.098) [-15583.552] * [-15583.023] (-15595.835) (-15576.358) (-15584.263) -- 0:42:37
234000 -- (-15580.717) [-15582.454] (-15592.876) (-15584.915) * (-15581.487) (-15576.652) [-15575.367] (-15590.484) -- 0:42:33
235000 -- (-15592.085) (-15591.252) [-15572.907] (-15588.744) * (-15577.192) [-15575.223] (-15579.740) (-15580.304) -- 0:42:28
Average standard deviation of split frequencies: 0.015454
236000 -- (-15601.362) [-15582.123] (-15589.244) (-15578.524) * (-15595.250) (-15590.001) [-15584.692] (-15585.171) -- 0:42:24
237000 -- (-15582.328) (-15577.323) (-15583.015) [-15573.376] * [-15579.322] (-15580.427) (-15590.177) (-15583.998) -- 0:42:23
238000 -- (-15585.790) [-15577.019] (-15598.229) (-15589.396) * (-15581.380) (-15595.378) (-15592.798) [-15583.934] -- 0:42:18
239000 -- (-15581.452) (-15589.816) [-15577.380] (-15576.614) * (-15587.110) [-15578.398] (-15582.217) (-15583.613) -- 0:42:14
240000 -- (-15586.570) [-15587.298] (-15588.239) (-15578.032) * (-15583.736) (-15590.989) [-15589.438] (-15598.839) -- 0:42:13
Average standard deviation of split frequencies: 0.014929
241000 -- (-15588.393) [-15583.611] (-15598.739) (-15581.491) * [-15576.279] (-15585.473) (-15591.856) (-15576.168) -- 0:42:08
242000 -- (-15587.131) (-15587.322) (-15586.256) [-15577.996] * (-15586.644) (-15584.380) (-15578.259) [-15575.084] -- 0:42:04
243000 -- [-15575.539] (-15598.115) (-15579.882) (-15583.591) * (-15583.828) (-15603.161) (-15602.317) [-15576.283] -- 0:42:03
244000 -- (-15598.128) [-15582.107] (-15586.321) (-15584.218) * (-15585.053) (-15597.067) [-15585.963] (-15579.786) -- 0:41:58
245000 -- (-15585.690) (-15583.206) [-15576.102] (-15589.301) * [-15597.682] (-15589.280) (-15575.409) (-15600.822) -- 0:41:54
Average standard deviation of split frequencies: 0.015227
246000 -- (-15589.799) (-15594.617) (-15576.837) [-15577.947] * [-15571.562] (-15588.910) (-15582.520) (-15591.976) -- 0:41:53
247000 -- (-15596.682) (-15587.107) (-15571.592) [-15575.004] * (-15582.511) (-15591.570) (-15587.693) [-15577.955] -- 0:41:48
248000 -- (-15588.811) (-15587.275) (-15576.914) [-15575.973] * (-15584.489) (-15592.366) (-15591.129) [-15581.014] -- 0:41:47
249000 -- (-15590.840) (-15576.301) [-15580.291] (-15582.776) * (-15594.097) [-15572.766] (-15575.111) (-15582.938) -- 0:41:43
250000 -- (-15586.993) [-15577.529] (-15587.706) (-15575.207) * (-15579.073) [-15583.115] (-15588.939) (-15595.545) -- 0:41:39
Average standard deviation of split frequencies: 0.014892
251000 -- (-15582.240) (-15582.469) [-15591.682] (-15576.738) * [-15593.350] (-15585.431) (-15588.338) (-15602.586) -- 0:41:37
252000 -- (-15583.515) (-15587.549) (-15589.463) [-15575.061] * (-15602.749) [-15576.580] (-15582.973) (-15580.912) -- 0:41:33
253000 -- (-15596.915) [-15586.196] (-15583.241) (-15581.590) * (-15598.301) (-15575.299) (-15570.709) [-15585.718] -- 0:41:31
254000 -- [-15574.523] (-15580.008) (-15585.776) (-15581.457) * (-15578.724) (-15578.929) [-15578.338] (-15590.409) -- 0:41:27
255000 -- (-15588.012) [-15575.246] (-15584.402) (-15587.493) * (-15598.996) [-15583.852] (-15594.355) (-15591.350) -- 0:41:23
Average standard deviation of split frequencies: 0.015329
256000 -- (-15580.022) (-15596.486) [-15581.897] (-15595.136) * [-15578.895] (-15597.255) (-15608.107) (-15579.859) -- 0:41:21
257000 -- [-15577.380] (-15588.173) (-15578.541) (-15582.674) * [-15585.417] (-15581.213) (-15598.005) (-15573.921) -- 0:41:17
258000 -- (-15580.188) (-15586.015) (-15581.641) [-15575.623] * (-15581.993) (-15589.930) (-15590.356) [-15572.696] -- 0:41:13
259000 -- (-15575.085) (-15589.391) (-15595.511) [-15587.851] * (-15582.835) (-15592.326) [-15580.692] (-15579.332) -- 0:41:11
260000 -- (-15584.418) (-15586.686) [-15588.978] (-15583.926) * (-15593.230) (-15585.752) (-15586.430) [-15578.530] -- 0:41:07
Average standard deviation of split frequencies: 0.014419
261000 -- (-15591.291) (-15596.338) (-15574.340) [-15574.216] * (-15599.697) (-15577.892) (-15589.479) [-15577.094] -- 0:41:06
262000 -- [-15573.891] (-15588.104) (-15579.686) (-15583.723) * (-15589.920) (-15578.688) (-15595.576) [-15573.206] -- 0:41:01
263000 -- (-15581.939) (-15587.979) (-15583.002) [-15587.459] * (-15584.785) (-15575.641) (-15588.002) [-15578.607] -- 0:40:57
264000 -- (-15593.313) (-15586.600) (-15584.758) [-15577.054] * (-15596.417) [-15581.376] (-15600.931) (-15585.194) -- 0:40:56
265000 -- (-15594.632) [-15581.358] (-15580.528) (-15584.882) * [-15583.321] (-15577.523) (-15594.587) (-15586.952) -- 0:40:51
Average standard deviation of split frequencies: 0.013198
266000 -- [-15579.164] (-15581.651) (-15578.107) (-15594.175) * (-15576.994) [-15582.336] (-15586.345) (-15581.762) -- 0:40:47
267000 -- [-15581.644] (-15598.246) (-15584.880) (-15572.981) * (-15590.842) (-15589.771) [-15587.188] (-15582.993) -- 0:40:43
268000 -- (-15587.835) [-15581.609] (-15595.837) (-15579.779) * (-15587.916) (-15589.439) (-15580.067) [-15581.900] -- 0:40:41
269000 -- (-15604.755) [-15576.138] (-15597.318) (-15586.851) * (-15578.690) (-15590.953) (-15585.961) [-15589.472] -- 0:40:37
270000 -- (-15595.492) [-15586.464] (-15586.855) (-15593.885) * (-15591.321) (-15619.331) (-15585.456) [-15582.481] -- 0:40:36
Average standard deviation of split frequencies: 0.012741
271000 -- (-15583.969) (-15594.340) (-15583.724) [-15590.251] * (-15583.033) (-15597.313) [-15579.375] (-15583.136) -- 0:40:34
272000 -- [-15578.054] (-15575.755) (-15581.325) (-15586.079) * (-15592.515) [-15581.531] (-15579.922) (-15588.223) -- 0:40:30
273000 -- (-15588.111) (-15579.841) [-15583.770] (-15587.111) * (-15597.294) (-15588.502) [-15574.797] (-15578.283) -- 0:40:25
274000 -- (-15586.265) [-15583.641] (-15579.499) (-15577.029) * (-15586.724) (-15595.728) (-15581.745) [-15578.729] -- 0:40:24
275000 -- (-15590.342) [-15587.689] (-15592.412) (-15574.671) * (-15583.577) (-15575.830) [-15586.930] (-15580.791) -- 0:40:20
Average standard deviation of split frequencies: 0.012360
276000 -- [-15579.144] (-15580.203) (-15600.402) (-15584.267) * (-15586.127) (-15588.771) (-15591.879) [-15585.209] -- 0:40:15
277000 -- (-15589.112) (-15575.600) [-15586.474] (-15582.883) * (-15588.328) (-15591.155) (-15587.185) [-15576.636] -- 0:40:14
278000 -- [-15579.258] (-15581.453) (-15585.392) (-15580.150) * (-15592.204) (-15592.886) [-15577.931] (-15579.054) -- 0:40:10
279000 -- (-15596.628) (-15581.506) [-15584.029] (-15591.999) * (-15598.131) (-15579.669) [-15574.373] (-15582.140) -- 0:40:05
280000 -- [-15587.697] (-15586.250) (-15588.549) (-15583.776) * [-15579.665] (-15586.439) (-15581.763) (-15575.741) -- 0:40:04
Average standard deviation of split frequencies: 0.012199
281000 -- (-15573.169) [-15577.144] (-15585.835) (-15582.825) * [-15576.654] (-15576.745) (-15582.679) (-15576.258) -- 0:40:00
282000 -- [-15586.248] (-15596.309) (-15596.143) (-15591.444) * (-15582.773) (-15581.230) (-15593.040) [-15586.324] -- 0:39:55
283000 -- [-15579.578] (-15584.033) (-15590.744) (-15593.113) * (-15572.880) [-15581.967] (-15582.692) (-15584.192) -- 0:39:51
284000 -- [-15578.630] (-15585.519) (-15597.000) (-15583.977) * [-15569.997] (-15582.030) (-15575.349) (-15574.152) -- 0:39:50
285000 -- (-15588.795) (-15578.621) (-15587.031) [-15584.680] * (-15592.377) [-15578.693] (-15589.296) (-15588.841) -- 0:39:45
Average standard deviation of split frequencies: 0.011972
286000 -- [-15578.344] (-15593.544) (-15587.093) (-15578.950) * (-15609.732) (-15585.591) (-15580.185) [-15586.430] -- 0:39:41
287000 -- (-15574.853) (-15583.413) [-15580.125] (-15587.695) * [-15588.926] (-15581.711) (-15593.866) (-15587.044) -- 0:39:37
288000 -- (-15580.180) [-15586.404] (-15592.256) (-15587.442) * (-15579.861) (-15596.144) [-15586.094] (-15586.466) -- 0:39:35
289000 -- (-15591.538) [-15591.820] (-15595.364) (-15589.158) * (-15579.722) [-15579.909] (-15605.336) (-15590.492) -- 0:39:31
290000 -- (-15593.639) [-15584.010] (-15597.319) (-15585.905) * [-15578.911] (-15586.537) (-15594.444) (-15588.154) -- 0:39:27
Average standard deviation of split frequencies: 0.012164
291000 -- [-15603.405] (-15585.248) (-15584.595) (-15583.143) * (-15586.851) (-15606.994) [-15585.361] (-15588.050) -- 0:39:25
292000 -- (-15594.068) (-15584.649) (-15596.581) [-15573.690] * (-15587.469) (-15608.953) (-15585.419) [-15581.499] -- 0:39:21
293000 -- (-15574.988) (-15584.755) [-15575.849] (-15581.949) * (-15582.490) (-15585.371) [-15576.676] (-15587.905) -- 0:39:17
294000 -- (-15581.142) [-15584.187] (-15584.093) (-15580.007) * [-15581.288] (-15576.143) (-15586.834) (-15581.609) -- 0:39:15
295000 -- [-15591.612] (-15588.100) (-15592.720) (-15585.016) * (-15588.071) (-15587.044) [-15583.861] (-15572.631) -- 0:39:11
Average standard deviation of split frequencies: 0.012028
296000 -- (-15589.675) (-15581.922) [-15582.648] (-15587.855) * (-15590.575) (-15575.121) [-15583.706] (-15576.626) -- 0:39:07
297000 -- (-15599.389) (-15595.821) (-15588.715) [-15589.033] * (-15587.968) [-15578.659] (-15603.710) (-15586.756) -- 0:39:05
298000 -- [-15579.006] (-15586.240) (-15592.957) (-15587.970) * (-15598.185) [-15577.501] (-15592.504) (-15587.756) -- 0:39:01
299000 -- (-15580.078) (-15592.718) [-15589.951] (-15596.551) * (-15590.815) (-15583.086) (-15579.604) [-15580.799] -- 0:38:57
300000 -- [-15583.588] (-15587.460) (-15591.642) (-15577.108) * (-15582.572) [-15584.771] (-15584.784) (-15593.931) -- 0:38:55
Average standard deviation of split frequencies: 0.012625
301000 -- (-15575.191) (-15581.127) [-15588.291] (-15579.967) * (-15589.824) (-15587.879) (-15586.843) [-15586.269] -- 0:38:51
302000 -- (-15584.430) (-15589.301) [-15575.035] (-15584.228) * (-15587.109) (-15579.074) [-15577.447] (-15586.952) -- 0:38:47
303000 -- [-15582.353] (-15594.227) (-15578.826) (-15582.803) * (-15581.200) [-15581.228] (-15580.270) (-15583.513) -- 0:38:45
304000 -- [-15577.840] (-15591.483) (-15580.773) (-15592.782) * (-15579.555) (-15582.609) (-15587.548) [-15575.579] -- 0:38:41
305000 -- (-15577.027) (-15596.013) (-15599.212) [-15575.675] * (-15586.069) [-15583.305] (-15586.479) (-15581.949) -- 0:38:39
Average standard deviation of split frequencies: 0.012932
306000 -- (-15587.499) [-15571.264] (-15595.733) (-15582.756) * (-15578.743) (-15590.106) [-15578.962] (-15581.379) -- 0:38:35
307000 -- (-15578.766) (-15589.533) [-15576.040] (-15590.794) * (-15602.454) (-15590.909) (-15593.732) [-15582.863] -- 0:38:31
308000 -- (-15583.107) [-15578.919] (-15586.891) (-15587.154) * (-15578.013) (-15580.540) [-15584.421] (-15587.082) -- 0:38:27
309000 -- (-15583.040) [-15582.472] (-15592.374) (-15583.606) * (-15576.883) (-15588.107) (-15591.056) [-15582.897] -- 0:38:25
310000 -- [-15574.719] (-15582.871) (-15586.093) (-15580.070) * (-15592.718) (-15593.876) [-15577.583] (-15577.598) -- 0:38:21
Average standard deviation of split frequencies: 0.011580
311000 -- [-15580.070] (-15583.092) (-15586.733) (-15609.654) * [-15579.989] (-15572.690) (-15579.930) (-15584.275) -- 0:38:17
312000 -- (-15587.996) [-15589.144] (-15585.231) (-15598.358) * (-15582.763) [-15580.118] (-15576.734) (-15587.039) -- 0:38:15
313000 -- (-15585.728) [-15578.721] (-15578.037) (-15596.198) * (-15597.434) (-15588.691) (-15586.130) [-15595.370] -- 0:38:11
314000 -- (-15598.194) [-15576.229] (-15583.891) (-15585.957) * (-15589.413) (-15584.907) [-15583.503] (-15584.809) -- 0:38:09
315000 -- (-15579.785) (-15589.567) [-15574.454] (-15597.568) * [-15585.490] (-15577.900) (-15583.316) (-15579.563) -- 0:38:05
Average standard deviation of split frequencies: 0.012209
316000 -- [-15582.574] (-15587.953) (-15592.084) (-15578.939) * (-15578.528) (-15589.094) (-15578.418) [-15579.714] -- 0:38:01
317000 -- (-15584.410) (-15598.409) [-15579.912] (-15584.543) * (-15590.310) [-15577.377] (-15599.429) (-15589.275) -- 0:37:59
318000 -- (-15588.535) (-15602.769) (-15595.930) [-15576.574] * [-15580.984] (-15593.347) (-15592.444) (-15597.643) -- 0:37:55
319000 -- (-15585.684) (-15585.406) [-15581.647] (-15595.177) * (-15589.724) (-15582.425) [-15584.970] (-15580.298) -- 0:37:51
320000 -- (-15578.382) [-15586.158] (-15580.303) (-15590.944) * (-15583.006) [-15586.851] (-15579.256) (-15588.359) -- 0:37:49
Average standard deviation of split frequencies: 0.013076
321000 -- [-15580.473] (-15586.588) (-15582.693) (-15592.473) * (-15586.324) (-15587.376) [-15577.207] (-15587.857) -- 0:37:45
322000 -- [-15573.447] (-15596.558) (-15586.880) (-15585.118) * (-15591.451) (-15598.656) (-15577.278) [-15585.595] -- 0:37:41
323000 -- (-15582.043) [-15579.680] (-15589.907) (-15592.517) * (-15596.477) [-15578.122] (-15573.307) (-15577.976) -- 0:37:37
324000 -- (-15578.244) (-15585.647) (-15582.994) [-15578.443] * (-15600.466) (-15577.055) [-15582.773] (-15578.340) -- 0:37:35
325000 -- [-15583.396] (-15583.189) (-15589.533) (-15580.862) * (-15580.913) (-15581.258) [-15583.542] (-15589.376) -- 0:37:31
Average standard deviation of split frequencies: 0.013128
326000 -- [-15581.138] (-15608.140) (-15599.800) (-15583.838) * (-15582.196) (-15571.463) [-15568.110] (-15590.355) -- 0:37:27
327000 -- [-15578.205] (-15587.703) (-15596.650) (-15584.165) * (-15577.949) (-15584.655) (-15578.927) [-15582.827] -- 0:37:25
328000 -- (-15587.597) [-15575.089] (-15588.350) (-15580.817) * [-15576.631] (-15592.369) (-15580.714) (-15576.631) -- 0:37:21
329000 -- [-15595.394] (-15579.510) (-15592.782) (-15592.858) * (-15588.105) (-15592.460) [-15592.684] (-15570.649) -- 0:37:19
330000 -- (-15586.647) (-15584.954) [-15579.720] (-15583.287) * (-15586.646) (-15587.433) (-15578.482) [-15579.365] -- 0:37:15
Average standard deviation of split frequencies: 0.012343
331000 -- (-15581.748) [-15589.975] (-15589.739) (-15583.866) * [-15576.289] (-15588.579) (-15586.447) (-15582.199) -- 0:37:11
332000 -- [-15584.496] (-15580.038) (-15583.573) (-15595.186) * (-15585.086) [-15580.349] (-15598.171) (-15590.053) -- 0:37:07
333000 -- [-15577.388] (-15579.116) (-15596.009) (-15590.050) * (-15587.400) (-15582.815) (-15599.424) [-15588.517] -- 0:37:05
334000 -- (-15593.075) (-15577.769) (-15582.607) [-15572.209] * (-15572.409) (-15579.578) [-15583.645] (-15575.799) -- 0:37:01
335000 -- (-15581.677) (-15582.308) [-15574.115] (-15581.923) * (-15586.536) (-15581.196) (-15595.330) [-15574.865] -- 0:36:57
Average standard deviation of split frequencies: 0.012738
336000 -- (-15589.405) (-15581.364) [-15574.827] (-15582.465) * [-15577.545] (-15587.205) (-15593.303) (-15581.116) -- 0:36:55
337000 -- [-15584.961] (-15591.449) (-15576.170) (-15585.077) * (-15601.185) (-15588.701) [-15579.547] (-15575.420) -- 0:36:51
338000 -- (-15581.487) (-15579.073) (-15585.805) [-15581.768] * [-15583.229] (-15581.750) (-15581.876) (-15577.728) -- 0:36:49
339000 -- (-15587.376) (-15579.929) [-15585.643] (-15592.279) * (-15581.404) (-15579.590) (-15583.373) [-15585.243] -- 0:36:45
340000 -- [-15582.642] (-15592.267) (-15577.583) (-15585.375) * (-15576.979) (-15593.069) (-15579.387) [-15575.709] -- 0:36:41
Average standard deviation of split frequencies: 0.012090
341000 -- (-15581.988) (-15585.429) (-15581.407) [-15577.586] * [-15572.929] (-15580.757) (-15588.729) (-15593.822) -- 0:36:39
342000 -- (-15587.104) (-15599.675) (-15597.062) [-15584.531] * (-15584.035) (-15582.562) [-15580.980] (-15594.587) -- 0:36:35
343000 -- (-15583.080) (-15574.727) [-15576.457] (-15593.631) * [-15575.540] (-15577.680) (-15581.867) (-15574.445) -- 0:36:31
344000 -- (-15579.029) (-15575.507) [-15574.047] (-15587.476) * (-15585.674) [-15595.961] (-15577.394) (-15577.080) -- 0:36:29
345000 -- (-15576.266) (-15591.532) [-15577.125] (-15584.703) * (-15579.033) (-15577.885) (-15579.089) [-15575.970] -- 0:36:25
Average standard deviation of split frequencies: 0.010971
346000 -- (-15593.257) (-15582.107) [-15588.587] (-15591.366) * (-15586.971) (-15578.910) (-15581.870) [-15583.138] -- 0:36:21
347000 -- [-15566.012] (-15592.345) (-15583.775) (-15581.619) * (-15591.522) (-15582.593) (-15595.555) [-15579.956] -- 0:36:19
348000 -- (-15575.284) [-15577.824] (-15570.721) (-15598.969) * [-15585.090] (-15591.403) (-15592.033) (-15581.349) -- 0:36:15
349000 -- (-15580.084) [-15588.732] (-15578.091) (-15579.676) * [-15574.607] (-15579.741) (-15596.027) (-15580.895) -- 0:36:11
350000 -- (-15594.404) (-15583.197) [-15582.625] (-15581.302) * (-15588.486) [-15584.238] (-15587.099) (-15580.382) -- 0:36:09
Average standard deviation of split frequencies: 0.010188
351000 -- (-15590.435) (-15588.507) (-15568.500) [-15575.055] * (-15598.735) (-15578.274) [-15583.502] (-15581.155) -- 0:36:05
352000 -- (-15581.323) (-15580.051) (-15586.229) [-15585.579] * (-15594.022) (-15588.797) (-15594.853) [-15584.682] -- 0:36:01
353000 -- (-15580.996) [-15573.356] (-15584.098) (-15581.387) * (-15588.625) [-15585.068] (-15586.976) (-15574.759) -- 0:35:59
354000 -- (-15582.773) (-15579.944) (-15584.836) [-15587.436] * (-15595.859) [-15576.444] (-15591.053) (-15582.799) -- 0:35:55
355000 -- (-15582.725) (-15576.905) (-15584.823) [-15573.108] * (-15586.858) [-15574.089] (-15590.581) (-15604.793) -- 0:35:51
Average standard deviation of split frequencies: 0.009555
356000 -- [-15583.941] (-15584.557) (-15577.808) (-15587.521) * [-15574.800] (-15586.162) (-15595.967) (-15596.379) -- 0:35:49
357000 -- (-15578.347) (-15578.746) [-15577.481] (-15584.889) * (-15580.913) [-15580.856] (-15589.132) (-15605.084) -- 0:35:45
358000 -- (-15590.630) (-15587.456) (-15587.828) [-15571.674] * (-15590.671) (-15590.648) [-15578.358] (-15599.160) -- 0:35:41
359000 -- (-15598.617) (-15595.914) (-15591.834) [-15574.670] * (-15579.263) [-15585.374] (-15582.105) (-15587.074) -- 0:35:39
360000 -- (-15593.381) [-15582.554] (-15576.118) (-15586.256) * (-15588.503) (-15585.697) (-15574.396) [-15587.133] -- 0:35:35
Average standard deviation of split frequencies: 0.009326
361000 -- (-15591.304) [-15576.953] (-15587.019) (-15595.170) * (-15590.500) (-15586.519) [-15586.447] (-15575.612) -- 0:35:31
362000 -- (-15583.724) [-15579.380] (-15572.971) (-15582.835) * (-15594.970) [-15587.235] (-15585.839) (-15582.761) -- 0:35:29
363000 -- (-15587.745) (-15585.571) [-15580.875] (-15586.596) * [-15580.854] (-15587.184) (-15586.105) (-15583.118) -- 0:35:25
364000 -- (-15579.216) [-15571.154] (-15586.883) (-15587.925) * [-15578.451] (-15587.489) (-15591.354) (-15590.219) -- 0:35:21
365000 -- (-15584.795) (-15579.141) [-15584.822] (-15590.070) * (-15576.075) (-15589.096) (-15589.193) [-15594.853] -- 0:35:17
Average standard deviation of split frequencies: 0.009796
366000 -- (-15581.255) [-15581.968] (-15593.251) (-15589.115) * (-15588.664) (-15582.588) (-15589.571) [-15587.670] -- 0:35:15
367000 -- [-15574.161] (-15596.576) (-15577.142) (-15577.542) * (-15576.537) [-15581.565] (-15582.253) (-15589.841) -- 0:35:11
368000 -- (-15588.109) (-15580.805) (-15588.834) [-15579.068] * [-15584.107] (-15595.822) (-15593.916) (-15583.338) -- 0:35:08
369000 -- (-15596.636) (-15585.346) (-15593.615) [-15583.257] * (-15581.298) [-15581.963] (-15588.131) (-15589.293) -- 0:35:05
370000 -- (-15588.541) [-15589.281] (-15581.990) (-15592.271) * (-15581.919) (-15575.639) [-15572.255] (-15587.681) -- 0:35:01
Average standard deviation of split frequencies: 0.009326
371000 -- (-15587.398) (-15571.268) (-15591.862) [-15585.492] * (-15581.648) (-15586.714) [-15587.575] (-15592.418) -- 0:34:57
372000 -- (-15585.628) (-15585.663) (-15580.360) [-15583.952] * [-15594.618] (-15588.677) (-15590.395) (-15596.358) -- 0:34:55
373000 -- [-15581.728] (-15579.346) (-15604.278) (-15576.046) * (-15578.445) (-15595.403) [-15585.312] (-15584.558) -- 0:34:51
374000 -- (-15588.531) [-15580.767] (-15583.113) (-15594.897) * (-15579.791) [-15576.420] (-15590.844) (-15594.724) -- 0:34:47
375000 -- [-15580.879] (-15575.256) (-15591.043) (-15584.864) * [-15586.337] (-15586.825) (-15585.321) (-15585.182) -- 0:34:43
Average standard deviation of split frequencies: 0.009162
376000 -- (-15592.902) (-15573.685) (-15597.893) [-15578.757] * (-15592.509) (-15589.815) [-15582.538] (-15589.058) -- 0:34:41
377000 -- (-15589.947) (-15576.716) [-15578.333] (-15577.559) * (-15583.127) [-15578.929] (-15595.268) (-15585.607) -- 0:34:37
378000 -- (-15584.735) (-15576.251) [-15585.352] (-15585.307) * [-15571.167] (-15590.164) (-15601.850) (-15577.629) -- 0:34:33
379000 -- (-15592.440) [-15578.685] (-15581.172) (-15578.414) * [-15588.205] (-15589.867) (-15581.738) (-15586.253) -- 0:34:31
380000 -- (-15593.820) (-15595.092) (-15579.101) [-15573.868] * (-15581.639) (-15592.298) (-15570.914) [-15577.345] -- 0:34:27
Average standard deviation of split frequencies: 0.009018
381000 -- (-15602.912) (-15578.058) (-15578.155) [-15578.333] * (-15574.268) [-15578.279] (-15577.893) (-15590.366) -- 0:34:23
382000 -- (-15586.780) [-15573.546] (-15581.995) (-15586.884) * (-15584.619) (-15590.388) [-15574.696] (-15583.150) -- 0:34:21
383000 -- (-15583.619) [-15579.598] (-15594.553) (-15589.956) * (-15595.517) (-15583.170) (-15572.136) [-15577.536] -- 0:34:18
384000 -- (-15584.828) (-15582.209) (-15584.179) [-15587.130] * (-15591.293) [-15575.354] (-15592.645) (-15577.567) -- 0:34:14
385000 -- (-15585.968) [-15577.916] (-15582.105) (-15590.265) * [-15579.217] (-15584.321) (-15593.426) (-15587.841) -- 0:34:11
Average standard deviation of split frequencies: 0.008831
386000 -- (-15587.492) (-15586.644) [-15579.046] (-15582.883) * [-15584.258] (-15595.824) (-15575.660) (-15590.237) -- 0:34:08
387000 -- (-15579.150) [-15584.724] (-15586.480) (-15588.916) * (-15577.216) (-15596.264) (-15589.553) [-15592.893] -- 0:34:04
388000 -- [-15581.512] (-15580.432) (-15581.939) (-15578.519) * [-15583.370] (-15582.452) (-15569.911) (-15584.803) -- 0:34:01
389000 -- [-15573.620] (-15576.459) (-15588.723) (-15589.186) * (-15595.071) (-15586.311) [-15578.879] (-15587.088) -- 0:33:58
390000 -- [-15583.930] (-15605.855) (-15591.377) (-15597.488) * (-15574.103) (-15585.007) [-15583.411] (-15594.655) -- 0:33:56
Average standard deviation of split frequencies: 0.009526
391000 -- (-15578.278) (-15596.108) [-15576.189] (-15591.217) * [-15581.101] (-15587.330) (-15590.296) (-15586.133) -- 0:33:52
392000 -- [-15573.305] (-15573.444) (-15587.663) (-15588.511) * (-15576.255) (-15586.285) [-15582.869] (-15577.644) -- 0:33:48
393000 -- (-15590.213) (-15583.068) (-15593.863) [-15583.860] * [-15579.551] (-15585.064) (-15579.957) (-15583.711) -- 0:33:46
394000 -- (-15590.228) (-15584.258) (-15576.078) [-15582.587] * (-15582.111) (-15590.599) (-15578.336) [-15576.003] -- 0:33:42
395000 -- (-15585.307) [-15581.238] (-15577.052) (-15597.257) * (-15597.649) (-15590.083) [-15572.141] (-15584.663) -- 0:33:38
Average standard deviation of split frequencies: 0.009743
396000 -- (-15587.133) [-15583.345] (-15593.025) (-15599.213) * (-15580.980) [-15584.617] (-15585.861) (-15582.136) -- 0:33:36
397000 -- (-15581.937) [-15574.686] (-15590.621) (-15585.845) * (-15579.619) (-15595.571) (-15584.800) [-15590.796] -- 0:33:32
398000 -- (-15578.591) (-15586.199) (-15590.054) [-15578.855] * (-15591.333) (-15578.302) [-15590.504] (-15584.351) -- 0:33:28
399000 -- [-15578.009] (-15591.896) (-15595.403) (-15580.487) * [-15584.828] (-15587.023) (-15587.233) (-15586.248) -- 0:33:24
400000 -- [-15579.716] (-15596.518) (-15595.097) (-15572.304) * (-15580.668) [-15581.540] (-15582.786) (-15594.924) -- 0:33:22
Average standard deviation of split frequencies: 0.009635
401000 -- (-15581.002) (-15586.015) (-15587.374) [-15578.848] * (-15586.350) (-15579.027) (-15606.077) [-15574.226] -- 0:33:18
402000 -- (-15582.181) (-15585.665) [-15572.846] (-15600.116) * (-15587.265) (-15587.237) (-15582.807) [-15575.439] -- 0:33:14
403000 -- (-15583.545) [-15586.161] (-15585.588) (-15587.126) * (-15587.810) (-15589.848) [-15584.196] (-15579.137) -- 0:33:12
404000 -- (-15582.996) (-15588.327) [-15580.543] (-15587.468) * (-15586.389) (-15586.459) (-15592.987) [-15585.684] -- 0:33:08
405000 -- (-15581.642) (-15584.466) [-15582.023] (-15577.208) * (-15589.340) [-15594.449] (-15591.687) (-15582.803) -- 0:33:06
Average standard deviation of split frequencies: 0.009110
406000 -- (-15582.880) (-15590.119) (-15587.690) [-15581.456] * [-15581.417] (-15586.100) (-15599.550) (-15589.699) -- 0:33:02
407000 -- [-15576.852] (-15593.269) (-15589.225) (-15582.890) * (-15580.802) [-15575.413] (-15591.503) (-15578.111) -- 0:32:58
408000 -- [-15587.311] (-15594.921) (-15583.989) (-15583.974) * (-15586.097) (-15580.887) (-15587.413) [-15585.201] -- 0:32:56
409000 -- (-15581.268) (-15594.884) [-15580.940] (-15580.613) * [-15585.010] (-15580.055) (-15585.611) (-15576.193) -- 0:32:52
410000 -- (-15589.426) (-15584.856) (-15586.285) [-15586.872] * (-15578.252) (-15586.563) (-15588.686) [-15579.948] -- 0:32:48
Average standard deviation of split frequencies: 0.009334
411000 -- (-15583.474) (-15579.197) [-15575.895] (-15579.055) * [-15576.728] (-15592.501) (-15578.539) (-15581.061) -- 0:32:44
412000 -- (-15581.511) [-15588.397] (-15589.495) (-15584.813) * [-15572.722] (-15573.966) (-15587.388) (-15589.859) -- 0:32:42
413000 -- (-15593.599) (-15583.886) [-15588.177] (-15592.003) * (-15588.533) [-15578.366] (-15577.847) (-15582.535) -- 0:32:38
414000 -- (-15579.260) (-15579.046) (-15600.938) [-15587.867] * (-15577.927) (-15589.048) [-15570.740] (-15587.738) -- 0:32:34
415000 -- (-15579.747) [-15580.651] (-15586.232) (-15584.523) * [-15578.733] (-15574.861) (-15579.512) (-15590.175) -- 0:32:32
Average standard deviation of split frequencies: 0.009240
416000 -- [-15581.272] (-15578.727) (-15584.995) (-15588.300) * [-15582.563] (-15579.559) (-15601.489) (-15585.667) -- 0:32:28
417000 -- (-15595.118) [-15587.768] (-15597.880) (-15587.776) * (-15598.063) (-15592.484) (-15593.099) [-15567.276] -- 0:32:24
418000 -- (-15577.835) [-15570.311] (-15592.224) (-15578.088) * [-15583.272] (-15585.523) (-15577.951) (-15576.110) -- 0:32:20
419000 -- (-15581.236) [-15583.053] (-15587.217) (-15591.573) * (-15583.503) (-15589.404) (-15581.947) [-15571.810] -- 0:32:18
420000 -- [-15584.188] (-15579.809) (-15583.426) (-15598.132) * (-15581.876) (-15586.321) [-15584.165] (-15589.840) -- 0:32:14
Average standard deviation of split frequencies: 0.009112
421000 -- (-15578.164) [-15579.419] (-15571.638) (-15587.856) * [-15579.523] (-15582.082) (-15591.594) (-15576.479) -- 0:32:10
422000 -- (-15598.594) (-15575.171) (-15578.872) [-15579.533] * [-15570.709] (-15589.096) (-15594.830) (-15589.168) -- 0:32:08
423000 -- (-15582.082) (-15581.839) (-15590.124) [-15584.987] * (-15586.115) (-15584.833) (-15572.741) [-15580.112] -- 0:32:04
424000 -- (-15578.878) (-15581.714) [-15587.136] (-15588.282) * [-15582.152] (-15577.013) (-15602.610) (-15583.029) -- 0:32:00
425000 -- (-15581.824) (-15577.934) [-15590.987] (-15592.860) * [-15580.330] (-15581.069) (-15599.039) (-15586.218) -- 0:31:57
Average standard deviation of split frequencies: 0.008794
426000 -- [-15582.836] (-15579.760) (-15588.782) (-15588.480) * (-15579.000) [-15580.932] (-15595.308) (-15590.057) -- 0:31:54
427000 -- (-15590.075) (-15578.158) (-15578.119) [-15581.606] * (-15584.479) (-15584.377) [-15577.032] (-15587.332) -- 0:31:50
428000 -- (-15585.845) (-15584.451) (-15600.617) [-15585.317] * (-15587.881) (-15580.758) (-15587.219) [-15581.660] -- 0:31:48
429000 -- [-15576.418] (-15586.123) (-15593.604) (-15585.458) * (-15586.552) (-15590.655) [-15578.228] (-15584.194) -- 0:31:44
430000 -- [-15583.222] (-15583.264) (-15597.153) (-15570.141) * (-15595.248) [-15579.391] (-15587.670) (-15580.128) -- 0:31:40
Average standard deviation of split frequencies: 0.008670
431000 -- (-15580.313) [-15578.518] (-15581.881) (-15582.844) * (-15589.042) [-15577.538] (-15587.348) (-15588.304) -- 0:31:38
432000 -- [-15589.165] (-15582.873) (-15595.262) (-15580.434) * (-15586.677) [-15586.400] (-15589.547) (-15591.344) -- 0:31:34
433000 -- (-15584.354) [-15574.103] (-15587.697) (-15593.689) * (-15593.583) (-15584.621) (-15585.406) [-15576.823] -- 0:31:30
434000 -- [-15591.135] (-15581.496) (-15582.455) (-15595.443) * [-15575.265] (-15592.868) (-15591.139) (-15586.130) -- 0:31:28
435000 -- (-15582.517) (-15593.724) (-15596.878) [-15576.558] * (-15586.209) (-15598.659) (-15579.917) [-15581.246] -- 0:31:25
Average standard deviation of split frequencies: 0.008621
436000 -- (-15592.187) (-15581.098) (-15576.705) [-15576.153] * [-15589.882] (-15584.386) (-15584.707) (-15588.763) -- 0:31:22
437000 -- (-15585.314) (-15590.863) (-15580.271) [-15581.640] * [-15571.257] (-15594.728) (-15576.212) (-15582.163) -- 0:31:18
438000 -- [-15575.063] (-15586.325) (-15581.227) (-15591.467) * [-15582.525] (-15579.337) (-15581.397) (-15588.462) -- 0:31:15
439000 -- [-15580.805] (-15577.251) (-15575.034) (-15592.004) * [-15580.520] (-15582.855) (-15583.528) (-15598.424) -- 0:31:12
440000 -- [-15575.546] (-15583.578) (-15586.685) (-15598.333) * (-15594.957) [-15578.787] (-15598.806) (-15589.048) -- 0:31:09
Average standard deviation of split frequencies: 0.008220
441000 -- (-15575.156) (-15593.366) [-15579.747] (-15604.508) * [-15587.023] (-15568.934) (-15589.928) (-15595.310) -- 0:31:05
442000 -- (-15578.312) [-15577.415] (-15591.694) (-15600.768) * [-15586.930] (-15579.059) (-15581.048) (-15593.254) -- 0:31:02
443000 -- [-15578.251] (-15583.971) (-15597.108) (-15590.503) * (-15589.694) [-15580.676] (-15597.762) (-15579.859) -- 0:30:59
444000 -- (-15578.472) (-15579.417) (-15595.580) [-15578.255] * (-15583.213) (-15578.864) (-15585.351) [-15579.619] -- 0:30:55
445000 -- [-15573.759] (-15582.542) (-15591.912) (-15571.181) * [-15573.383] (-15583.442) (-15591.537) (-15585.089) -- 0:30:53
Average standard deviation of split frequencies: 0.008038
446000 -- (-15576.589) [-15581.247] (-15578.503) (-15602.559) * (-15578.755) [-15579.255] (-15602.510) (-15590.785) -- 0:30:49
447000 -- (-15579.239) [-15579.921] (-15589.594) (-15588.763) * (-15594.416) (-15580.817) [-15577.437] (-15589.112) -- 0:30:45
448000 -- (-15577.916) (-15585.909) [-15586.189] (-15599.489) * (-15586.909) [-15577.588] (-15583.339) (-15578.441) -- 0:30:42
449000 -- (-15574.449) [-15580.434] (-15582.785) (-15580.064) * [-15579.128] (-15582.606) (-15587.165) (-15581.100) -- 0:30:39
450000 -- (-15588.842) (-15574.656) [-15568.883] (-15578.765) * (-15576.543) [-15573.969] (-15586.422) (-15582.211) -- 0:30:35
Average standard deviation of split frequencies: 0.007487
451000 -- (-15587.118) [-15582.629] (-15591.277) (-15588.444) * (-15573.950) (-15582.503) [-15582.995] (-15583.717) -- 0:30:33
452000 -- (-15580.960) (-15588.045) (-15573.448) [-15583.435] * (-15584.467) [-15572.906] (-15582.969) (-15580.407) -- 0:30:29
453000 -- [-15570.383] (-15590.148) (-15581.199) (-15594.278) * (-15582.276) (-15596.140) (-15581.928) [-15585.801] -- 0:30:25
454000 -- [-15588.576] (-15590.567) (-15578.046) (-15596.390) * (-15596.810) [-15583.187] (-15591.409) (-15586.589) -- 0:30:22
455000 -- [-15581.698] (-15586.267) (-15583.135) (-15588.054) * (-15588.804) (-15582.918) [-15590.666] (-15577.982) -- 0:30:19
Average standard deviation of split frequencies: 0.007024
456000 -- (-15576.885) [-15582.805] (-15583.497) (-15584.679) * (-15579.713) [-15581.801] (-15588.205) (-15595.769) -- 0:30:15
457000 -- [-15580.733] (-15591.395) (-15598.949) (-15583.766) * [-15586.363] (-15588.886) (-15586.572) (-15588.473) -- 0:30:11
458000 -- (-15586.634) [-15585.585] (-15605.502) (-15578.681) * (-15592.810) (-15587.989) [-15588.597] (-15583.764) -- 0:30:09
459000 -- (-15584.105) (-15585.599) (-15590.653) [-15570.597] * (-15580.949) [-15582.525] (-15585.551) (-15581.100) -- 0:30:05
460000 -- (-15594.188) (-15590.145) (-15591.525) [-15577.468] * (-15583.503) (-15580.568) [-15576.677] (-15594.685) -- 0:30:01
Average standard deviation of split frequencies: 0.007189
461000 -- (-15592.592) (-15590.546) [-15577.441] (-15595.444) * [-15588.959] (-15588.258) (-15599.660) (-15584.140) -- 0:29:59
462000 -- (-15586.377) [-15587.843] (-15589.690) (-15598.019) * [-15576.793] (-15597.225) (-15578.897) (-15598.494) -- 0:29:55
463000 -- [-15577.809] (-15583.240) (-15594.909) (-15585.005) * [-15573.683] (-15585.700) (-15590.385) (-15580.216) -- 0:29:51
464000 -- (-15578.164) (-15582.813) (-15581.360) [-15579.409] * (-15586.215) (-15593.584) (-15583.137) [-15578.770] -- 0:29:49
465000 -- [-15577.627] (-15587.768) (-15590.169) (-15579.382) * (-15585.527) (-15600.301) (-15582.559) [-15579.027] -- 0:29:45
Average standard deviation of split frequencies: 0.007185
466000 -- (-15597.207) (-15593.232) [-15584.259] (-15579.556) * (-15587.875) (-15592.949) [-15576.831] (-15585.661) -- 0:29:41
467000 -- [-15586.822] (-15593.341) (-15580.079) (-15580.711) * (-15586.656) (-15573.510) [-15591.107] (-15601.897) -- 0:29:39
468000 -- (-15578.961) (-15586.848) [-15582.754] (-15586.875) * (-15572.115) (-15587.850) (-15590.554) [-15582.798] -- 0:29:35
469000 -- (-15590.449) [-15587.940] (-15585.583) (-15580.204) * (-15573.457) (-15576.123) (-15585.599) [-15579.429] -- 0:29:33
470000 -- [-15574.647] (-15603.890) (-15583.027) (-15580.938) * [-15588.898] (-15577.119) (-15579.060) (-15594.317) -- 0:29:29
Average standard deviation of split frequencies: 0.007191
471000 -- (-15582.288) (-15601.887) (-15593.325) [-15581.055] * [-15578.379] (-15594.413) (-15586.611) (-15588.174) -- 0:29:25
472000 -- [-15579.691] (-15601.429) (-15583.744) (-15589.148) * (-15586.952) (-15588.057) [-15585.763] (-15579.204) -- 0:29:21
473000 -- [-15576.577] (-15592.088) (-15587.067) (-15588.561) * [-15581.519] (-15593.449) (-15586.822) (-15579.096) -- 0:29:19
474000 -- (-15581.077) (-15582.844) [-15589.335] (-15600.079) * (-15609.120) [-15591.877] (-15586.471) (-15580.895) -- 0:29:15
475000 -- (-15579.855) (-15576.297) [-15578.347] (-15580.728) * (-15593.801) (-15590.067) [-15585.523] (-15578.912) -- 0:29:12
Average standard deviation of split frequencies: 0.007440
476000 -- (-15585.543) (-15584.203) (-15586.086) [-15580.464] * [-15588.998] (-15574.492) (-15585.677) (-15575.214) -- 0:29:09
477000 -- (-15588.194) (-15585.759) [-15577.436] (-15583.995) * (-15584.051) [-15577.248] (-15582.541) (-15584.662) -- 0:29:05
478000 -- (-15583.279) (-15590.195) (-15601.044) [-15580.587] * (-15588.152) [-15575.166] (-15589.302) (-15585.086) -- 0:29:02
479000 -- (-15585.312) (-15587.160) [-15579.965] (-15581.424) * (-15589.905) (-15575.451) [-15582.136] (-15585.578) -- 0:28:59
480000 -- [-15581.013] (-15587.484) (-15594.654) (-15585.110) * (-15593.893) (-15587.409) (-15576.536) [-15573.358] -- 0:28:55
Average standard deviation of split frequencies: 0.006966
481000 -- (-15586.066) [-15578.180] (-15588.860) (-15597.246) * (-15580.753) (-15590.706) (-15584.476) [-15583.134] -- 0:28:52
482000 -- (-15581.582) (-15583.937) [-15581.459] (-15580.394) * (-15601.974) (-15589.381) [-15588.554] (-15577.725) -- 0:28:49
483000 -- [-15579.534] (-15591.345) (-15585.244) (-15581.362) * (-15587.309) (-15577.359) (-15580.917) [-15581.820] -- 0:28:45
484000 -- (-15581.435) (-15593.565) (-15584.582) [-15575.798] * [-15580.247] (-15593.987) (-15581.767) (-15586.344) -- 0:28:41
485000 -- [-15575.205] (-15583.002) (-15587.205) (-15589.529) * (-15583.176) [-15580.249] (-15588.293) (-15587.053) -- 0:28:39
Average standard deviation of split frequencies: 0.007113
486000 -- (-15583.696) (-15586.008) (-15584.578) [-15576.730] * (-15578.670) (-15578.653) (-15576.764) [-15587.754] -- 0:28:35
487000 -- (-15588.869) [-15577.032] (-15577.179) (-15590.018) * (-15581.268) [-15587.895] (-15582.766) (-15583.422) -- 0:28:32
488000 -- (-15596.394) (-15592.153) [-15584.148] (-15587.694) * [-15575.437] (-15576.270) (-15590.014) (-15594.955) -- 0:28:29
489000 -- [-15583.292] (-15590.278) (-15586.450) (-15590.755) * (-15583.720) (-15575.700) (-15579.953) [-15580.148] -- 0:28:25
490000 -- (-15594.742) (-15586.551) (-15578.860) [-15576.498] * (-15577.372) (-15587.919) [-15574.659] (-15577.099) -- 0:28:21
Average standard deviation of split frequencies: 0.006898
491000 -- [-15577.708] (-15586.808) (-15587.541) (-15589.002) * [-15575.201] (-15574.276) (-15602.181) (-15572.538) -- 0:28:19
492000 -- [-15573.913] (-15584.000) (-15570.434) (-15591.365) * (-15586.966) (-15593.134) (-15579.809) [-15575.231] -- 0:28:15
493000 -- (-15596.370) [-15580.786] (-15574.877) (-15596.925) * (-15577.011) (-15585.505) (-15581.920) [-15574.693] -- 0:28:12
494000 -- (-15597.682) (-15579.340) [-15585.558] (-15595.083) * (-15594.000) (-15585.763) (-15578.071) [-15593.248] -- 0:28:09
495000 -- (-15590.549) (-15580.089) [-15587.877] (-15581.079) * [-15576.526] (-15596.843) (-15576.103) (-15589.092) -- 0:28:06
Average standard deviation of split frequencies: 0.006629
496000 -- (-15593.883) (-15579.541) (-15581.134) [-15577.155] * (-15601.186) (-15586.122) [-15593.596] (-15587.995) -- 0:28:02
497000 -- (-15598.025) (-15586.166) [-15591.618] (-15592.579) * (-15587.506) (-15577.478) [-15582.809] (-15585.531) -- 0:28:00
498000 -- (-15585.241) (-15573.463) [-15584.453] (-15586.530) * (-15581.565) [-15573.597] (-15580.125) (-15578.840) -- 0:27:56
499000 -- (-15583.284) (-15583.289) (-15578.714) [-15580.446] * (-15595.815) (-15595.120) (-15575.442) [-15573.194] -- 0:27:53
500000 -- [-15575.359] (-15580.104) (-15580.513) (-15586.339) * [-15575.842] (-15584.713) (-15578.139) (-15577.874) -- 0:27:50
Average standard deviation of split frequencies: 0.006567
501000 -- (-15580.049) (-15587.236) (-15596.319) [-15579.835] * [-15592.959] (-15581.242) (-15575.350) (-15587.932) -- 0:27:46
502000 -- [-15582.236] (-15594.344) (-15584.253) (-15579.680) * [-15587.562] (-15580.662) (-15579.795) (-15599.514) -- 0:27:42
503000 -- (-15594.956) (-15595.708) (-15579.508) [-15579.502] * [-15576.493] (-15593.072) (-15587.416) (-15589.060) -- 0:27:39
504000 -- [-15578.588] (-15588.786) (-15587.085) (-15585.920) * [-15577.676] (-15594.662) (-15584.425) (-15592.383) -- 0:27:36
505000 -- (-15587.644) (-15593.627) (-15584.827) [-15583.388] * (-15579.372) (-15586.925) (-15591.917) [-15588.436] -- 0:27:32
Average standard deviation of split frequencies: 0.006569
506000 -- (-15590.088) (-15587.539) [-15577.899] (-15593.191) * (-15582.804) (-15591.047) (-15597.311) [-15577.284] -- 0:27:28
507000 -- (-15591.010) (-15583.578) [-15577.588] (-15575.424) * [-15587.538] (-15585.597) (-15581.628) (-15579.612) -- 0:27:26
508000 -- (-15579.091) [-15581.773] (-15584.826) (-15587.477) * (-15583.445) (-15580.902) [-15582.490] (-15585.884) -- 0:27:22
509000 -- [-15579.621] (-15587.875) (-15590.478) (-15584.982) * [-15584.550] (-15571.410) (-15598.155) (-15588.618) -- 0:27:19
510000 -- [-15578.444] (-15590.061) (-15580.597) (-15588.437) * (-15588.039) (-15596.077) (-15590.758) [-15581.741] -- 0:27:16
Average standard deviation of split frequencies: 0.006923
511000 -- (-15582.838) (-15590.409) (-15580.136) [-15579.116] * (-15594.867) (-15589.428) [-15586.506] (-15586.432) -- 0:27:12
512000 -- (-15575.156) (-15587.695) [-15585.309] (-15589.694) * (-15593.508) (-15582.899) [-15578.929] (-15577.599) -- 0:27:09
513000 -- (-15585.973) [-15582.083] (-15588.648) (-15587.071) * (-15592.999) [-15582.714] (-15577.522) (-15587.926) -- 0:27:06
514000 -- (-15586.728) [-15580.011] (-15587.156) (-15581.746) * (-15596.279) [-15585.987] (-15586.599) (-15571.787) -- 0:27:02
515000 -- (-15589.760) (-15585.545) (-15571.443) [-15573.625] * (-15582.103) (-15579.776) (-15579.371) [-15580.647] -- 0:26:59
Average standard deviation of split frequencies: 0.006582
516000 -- [-15572.050] (-15604.177) (-15582.437) (-15581.486) * (-15594.458) (-15584.715) (-15585.951) [-15569.425] -- 0:26:56
517000 -- (-15597.497) (-15586.655) (-15575.210) [-15572.424] * (-15597.091) (-15583.321) (-15589.983) [-15581.154] -- 0:26:52
518000 -- (-15589.095) [-15576.743] (-15576.053) (-15584.474) * [-15578.246] (-15592.344) (-15593.323) (-15586.178) -- 0:26:48
519000 -- (-15582.533) [-15579.343] (-15593.051) (-15593.605) * (-15582.493) (-15588.488) (-15572.813) [-15578.768] -- 0:26:46
520000 -- (-15582.607) [-15585.692] (-15591.042) (-15601.613) * (-15579.023) (-15583.245) (-15586.534) [-15576.279] -- 0:26:42
Average standard deviation of split frequencies: 0.006790
521000 -- (-15579.099) (-15588.296) (-15594.281) [-15577.465] * (-15586.024) [-15589.178] (-15583.352) (-15599.079) -- 0:26:39
522000 -- [-15578.763] (-15600.405) (-15582.087) (-15589.617) * (-15576.033) (-15592.025) [-15575.240] (-15600.397) -- 0:26:36
523000 -- [-15581.965] (-15602.735) (-15597.825) (-15585.630) * [-15581.159] (-15591.891) (-15594.860) (-15586.429) -- 0:26:33
524000 -- (-15594.141) (-15583.422) [-15586.422] (-15586.065) * (-15587.844) (-15578.979) (-15592.896) [-15585.281] -- 0:26:29
525000 -- (-15585.456) (-15589.554) [-15586.625] (-15589.967) * [-15584.731] (-15590.959) (-15582.273) (-15579.089) -- 0:26:26
Average standard deviation of split frequencies: 0.006871
526000 -- (-15599.484) (-15573.960) (-15586.012) [-15597.794] * (-15600.981) [-15594.668] (-15588.961) (-15583.733) -- 0:26:23
527000 -- (-15585.825) (-15582.527) [-15579.848] (-15592.712) * (-15596.334) (-15597.395) (-15589.555) [-15583.833] -- 0:26:19
528000 -- (-15584.668) [-15578.792] (-15584.573) (-15582.232) * [-15592.558] (-15580.303) (-15591.348) (-15596.035) -- 0:26:16
529000 -- (-15591.757) (-15579.246) (-15587.160) [-15580.346] * [-15580.270] (-15594.516) (-15583.433) (-15589.064) -- 0:26:13
530000 -- [-15582.589] (-15602.912) (-15574.826) (-15587.469) * [-15580.443] (-15582.411) (-15606.657) (-15579.463) -- 0:26:09
Average standard deviation of split frequencies: 0.006605
531000 -- (-15587.975) (-15589.991) (-15579.831) [-15579.804] * (-15589.183) (-15592.191) (-15604.121) [-15583.977] -- 0:26:05
532000 -- [-15578.255] (-15583.829) (-15592.565) (-15583.568) * (-15573.958) (-15589.561) (-15588.364) [-15575.966] -- 0:26:03
533000 -- [-15591.065] (-15581.188) (-15595.368) (-15574.732) * (-15575.758) (-15588.443) (-15587.390) [-15580.579] -- 0:25:59
534000 -- (-15588.485) [-15583.229] (-15592.585) (-15579.128) * [-15581.389] (-15593.830) (-15582.861) (-15578.233) -- 0:25:55
535000 -- [-15588.203] (-15585.232) (-15576.938) (-15580.616) * (-15583.684) (-15583.427) (-15579.594) [-15577.293] -- 0:25:53
Average standard deviation of split frequencies: 0.006247
536000 -- (-15584.508) (-15582.213) (-15579.166) [-15577.714] * (-15589.575) (-15589.241) (-15583.354) [-15580.843] -- 0:25:49
537000 -- [-15585.240] (-15584.030) (-15589.315) (-15574.016) * (-15590.291) (-15581.757) [-15576.671] (-15592.385) -- 0:25:45
538000 -- (-15593.211) (-15585.241) (-15578.205) [-15568.231] * (-15583.168) (-15590.617) [-15577.933] (-15586.823) -- 0:25:42
539000 -- (-15587.716) (-15592.579) (-15575.885) [-15581.075] * (-15584.853) (-15597.903) (-15578.285) [-15588.632] -- 0:25:39
540000 -- (-15587.568) (-15582.152) [-15579.469] (-15577.966) * (-15587.870) (-15580.567) [-15589.138] (-15586.101) -- 0:25:35
Average standard deviation of split frequencies: 0.006260
541000 -- [-15579.325] (-15584.815) (-15584.899) (-15589.120) * [-15584.305] (-15579.563) (-15590.561) (-15588.384) -- 0:25:32
542000 -- (-15592.499) (-15581.098) [-15590.030] (-15587.173) * [-15578.496] (-15584.095) (-15586.055) (-15581.429) -- 0:25:29
543000 -- (-15583.484) (-15579.574) [-15585.993] (-15573.092) * [-15579.338] (-15589.383) (-15580.667) (-15596.240) -- 0:25:25
544000 -- (-15576.211) [-15589.300] (-15588.110) (-15575.522) * (-15596.019) (-15586.976) [-15573.029] (-15589.579) -- 0:25:22
545000 -- (-15579.937) (-15596.755) [-15586.841] (-15574.370) * (-15588.390) (-15596.572) [-15572.113] (-15586.113) -- 0:25:19
Average standard deviation of split frequencies: 0.006022
546000 -- [-15593.672] (-15595.644) (-15584.565) (-15568.027) * (-15596.352) (-15596.392) [-15582.159] (-15577.790) -- 0:25:15
547000 -- (-15578.866) (-15586.646) [-15576.673] (-15594.618) * (-15575.219) (-15582.124) (-15580.099) [-15580.180] -- 0:25:12
548000 -- [-15569.207] (-15588.543) (-15576.398) (-15589.562) * (-15590.905) (-15587.608) (-15577.057) [-15579.080] -- 0:25:08
549000 -- (-15574.780) (-15594.164) (-15590.198) [-15582.918] * (-15578.555) (-15587.519) (-15590.010) [-15584.515] -- 0:25:05
550000 -- (-15586.373) (-15580.492) (-15580.587) [-15578.415] * [-15575.168] (-15588.793) (-15575.308) (-15578.609) -- 0:25:02
Average standard deviation of split frequencies: 0.006014
551000 -- (-15590.128) (-15605.578) [-15591.044] (-15587.770) * (-15605.206) (-15587.168) (-15583.271) [-15584.003] -- 0:24:58
552000 -- (-15590.005) (-15589.858) [-15581.026] (-15602.280) * [-15575.863] (-15592.725) (-15582.739) (-15582.575) -- 0:24:55
553000 -- (-15576.766) (-15579.430) [-15577.194] (-15591.867) * [-15586.325] (-15602.584) (-15587.202) (-15584.848) -- 0:24:52
554000 -- [-15582.049] (-15588.003) (-15581.292) (-15583.454) * [-15582.401] (-15592.768) (-15601.548) (-15584.644) -- 0:24:48
555000 -- (-15584.317) (-15587.000) [-15585.298] (-15598.162) * (-15583.867) (-15588.072) [-15588.125] (-15577.899) -- 0:24:44
Average standard deviation of split frequencies: 0.006326
556000 -- (-15578.326) (-15584.108) [-15579.552] (-15592.803) * (-15590.062) (-15580.679) [-15581.502] (-15579.582) -- 0:24:42
557000 -- [-15584.453] (-15595.104) (-15578.108) (-15589.686) * (-15594.825) (-15589.473) (-15603.470) [-15580.801] -- 0:24:38
558000 -- (-15579.624) (-15584.272) [-15587.935] (-15582.373) * (-15583.303) (-15580.619) (-15575.170) [-15583.670] -- 0:24:34
559000 -- (-15582.103) (-15591.156) (-15586.989) [-15582.731] * (-15589.200) [-15584.902] (-15583.115) (-15576.190) -- 0:24:32
560000 -- (-15575.973) (-15600.753) [-15584.796] (-15585.815) * (-15587.906) (-15583.493) (-15603.508) [-15573.291] -- 0:24:28
Average standard deviation of split frequencies: 0.006360
561000 -- (-15587.257) (-15575.793) (-15584.743) [-15579.959] * (-15598.030) (-15580.268) (-15596.251) [-15570.356] -- 0:24:24
562000 -- (-15591.804) [-15587.038] (-15591.130) (-15587.149) * (-15607.393) [-15579.001] (-15581.213) (-15579.702) -- 0:24:22
563000 -- (-15584.826) (-15583.968) (-15576.211) [-15588.954] * (-15595.074) [-15585.293] (-15574.031) (-15586.192) -- 0:24:18
564000 -- (-15584.473) (-15586.898) [-15573.583] (-15575.512) * (-15580.392) (-15584.186) (-15580.561) [-15584.538] -- 0:24:14
565000 -- [-15582.543] (-15582.754) (-15588.879) (-15578.046) * (-15583.715) (-15584.446) (-15593.040) [-15583.909] -- 0:24:12
Average standard deviation of split frequencies: 0.006471
566000 -- (-15597.906) (-15601.954) (-15586.171) [-15580.461] * (-15595.601) [-15591.843] (-15588.732) (-15588.271) -- 0:24:08
567000 -- (-15598.079) (-15587.977) (-15579.770) [-15583.718] * (-15589.916) (-15588.861) (-15580.698) [-15586.410] -- 0:24:04
568000 -- (-15599.365) [-15581.823] (-15581.188) (-15582.022) * (-15589.757) (-15585.711) [-15585.376] (-15591.252) -- 0:24:02
569000 -- [-15575.545] (-15592.637) (-15576.557) (-15570.981) * (-15592.885) (-15578.806) [-15571.677] (-15586.756) -- 0:23:58
570000 -- (-15580.862) (-15583.601) (-15579.270) [-15575.294] * (-15585.855) (-15572.330) [-15580.180] (-15592.273) -- 0:23:54
Average standard deviation of split frequencies: 0.006891
571000 -- [-15579.884] (-15589.459) (-15588.577) (-15578.649) * (-15577.068) (-15576.342) [-15581.929] (-15581.579) -- 0:23:52
572000 -- (-15578.014) (-15597.666) (-15575.473) [-15573.854] * (-15588.902) (-15601.245) [-15576.396] (-15591.262) -- 0:23:48
573000 -- [-15590.951] (-15588.459) (-15589.125) (-15581.707) * (-15575.817) (-15581.296) (-15571.983) [-15575.183] -- 0:23:44
574000 -- (-15591.507) [-15580.811] (-15586.558) (-15582.338) * (-15576.829) (-15585.885) [-15591.278] (-15581.987) -- 0:23:41
575000 -- (-15584.377) (-15585.531) [-15584.304] (-15589.650) * (-15596.023) [-15572.374] (-15581.246) (-15584.017) -- 0:23:38
Average standard deviation of split frequencies: 0.006904
576000 -- (-15589.880) [-15570.295] (-15594.899) (-15589.915) * [-15582.235] (-15580.994) (-15585.867) (-15585.092) -- 0:23:35
577000 -- (-15587.510) [-15585.789] (-15594.888) (-15594.451) * (-15581.459) [-15586.486] (-15588.265) (-15588.864) -- 0:23:31
578000 -- (-15596.409) (-15595.697) (-15584.495) [-15581.047] * (-15579.996) (-15580.228) [-15573.008] (-15584.978) -- 0:23:28
579000 -- (-15599.684) [-15584.954] (-15592.956) (-15592.661) * [-15583.976] (-15574.068) (-15597.772) (-15592.383) -- 0:23:25
580000 -- (-15580.202) [-15577.035] (-15585.096) (-15583.117) * (-15596.243) [-15584.114] (-15575.305) (-15580.420) -- 0:23:21
Average standard deviation of split frequencies: 0.007036
581000 -- (-15582.917) [-15590.856] (-15591.723) (-15587.119) * (-15590.982) (-15579.983) (-15584.238) [-15581.984] -- 0:23:18
582000 -- [-15584.402] (-15589.495) (-15588.304) (-15583.380) * (-15582.726) (-15590.317) (-15586.615) [-15581.241] -- 0:23:14
583000 -- (-15586.531) (-15589.926) [-15577.928] (-15582.667) * [-15582.208] (-15589.109) (-15582.586) (-15584.636) -- 0:23:11
584000 -- (-15583.955) (-15593.503) [-15572.751] (-15582.422) * (-15597.390) (-15582.041) [-15590.511] (-15591.205) -- 0:23:08
585000 -- (-15591.657) (-15596.209) [-15577.211] (-15579.811) * [-15590.634] (-15592.098) (-15598.372) (-15604.475) -- 0:23:05
Average standard deviation of split frequencies: 0.006497
586000 -- (-15577.222) [-15582.327] (-15578.790) (-15589.384) * (-15579.216) [-15581.187] (-15605.269) (-15591.722) -- 0:23:01
587000 -- [-15577.305] (-15592.325) (-15585.421) (-15586.957) * (-15583.774) (-15599.587) [-15579.046] (-15579.421) -- 0:22:59
588000 -- [-15589.799] (-15591.172) (-15591.074) (-15583.319) * (-15581.036) [-15576.379] (-15578.805) (-15584.517) -- 0:22:55
589000 -- (-15588.253) [-15573.960] (-15597.478) (-15594.896) * [-15572.608] (-15580.652) (-15585.093) (-15584.636) -- 0:22:51
590000 -- (-15576.337) (-15577.821) (-15598.027) [-15585.346] * (-15578.956) (-15591.273) (-15582.807) [-15581.303] -- 0:22:48
Average standard deviation of split frequencies: 0.006426
591000 -- [-15580.607] (-15583.528) (-15592.727) (-15585.434) * (-15596.476) (-15577.918) (-15583.638) [-15575.844] -- 0:22:45
592000 -- [-15578.238] (-15608.485) (-15591.865) (-15580.993) * (-15587.460) [-15577.190] (-15589.106) (-15580.392) -- 0:22:41
593000 -- [-15573.890] (-15586.491) (-15590.648) (-15589.691) * [-15584.403] (-15575.154) (-15580.603) (-15579.068) -- 0:22:38
594000 -- [-15584.526] (-15581.349) (-15585.996) (-15589.280) * (-15599.016) (-15588.435) (-15581.197) [-15576.957] -- 0:22:35
595000 -- [-15572.884] (-15593.870) (-15587.447) (-15571.365) * (-15600.265) (-15578.060) [-15582.555] (-15570.733) -- 0:22:32
Average standard deviation of split frequencies: 0.006753
596000 -- (-15579.601) (-15595.534) [-15584.920] (-15580.728) * (-15592.558) (-15584.373) (-15593.012) [-15577.843] -- 0:22:28
597000 -- (-15579.886) (-15590.196) [-15583.080] (-15579.487) * (-15583.038) (-15594.809) (-15589.401) [-15584.877] -- 0:22:25
598000 -- (-15593.412) (-15590.229) (-15577.982) [-15576.750] * (-15581.337) (-15587.031) [-15588.796] (-15578.368) -- 0:22:22
599000 -- (-15576.844) [-15583.638] (-15591.901) (-15577.785) * (-15600.350) (-15589.675) (-15586.872) [-15579.260] -- 0:22:18
600000 -- (-15584.351) (-15586.052) [-15578.023] (-15588.342) * (-15599.630) (-15583.980) (-15579.908) [-15575.607] -- 0:22:15
Average standard deviation of split frequencies: 0.007270
601000 -- (-15587.160) (-15580.269) [-15583.054] (-15584.027) * (-15584.480) (-15595.648) [-15590.239] (-15580.199) -- 0:22:12
602000 -- (-15577.513) (-15591.467) [-15579.976] (-15580.900) * (-15576.632) (-15596.093) [-15585.943] (-15587.611) -- 0:22:08
603000 -- (-15585.653) (-15591.248) [-15576.887] (-15586.780) * [-15574.468] (-15588.568) (-15584.227) (-15583.137) -- 0:22:05
604000 -- (-15576.387) (-15578.484) [-15574.666] (-15584.897) * (-15584.594) (-15585.716) [-15579.815] (-15591.678) -- 0:22:01
605000 -- (-15591.341) (-15583.477) (-15583.870) [-15585.800] * (-15588.993) (-15595.184) [-15593.139] (-15585.154) -- 0:21:58
Average standard deviation of split frequencies: 0.007185
606000 -- (-15584.687) (-15580.679) (-15585.523) [-15588.114] * (-15580.102) (-15584.233) (-15585.546) [-15593.256] -- 0:21:55
607000 -- (-15581.794) (-15577.343) [-15573.097] (-15574.310) * [-15583.354] (-15578.592) (-15574.106) (-15598.558) -- 0:21:51
608000 -- [-15584.183] (-15579.068) (-15582.653) (-15594.651) * (-15594.030) (-15587.774) (-15585.607) [-15571.860] -- 0:21:48
609000 -- (-15591.540) (-15579.160) [-15570.763] (-15578.956) * (-15576.676) (-15584.586) [-15583.102] (-15593.240) -- 0:21:45
610000 -- [-15582.251] (-15577.687) (-15595.484) (-15566.365) * (-15577.723) (-15599.002) (-15578.452) [-15583.954] -- 0:21:41
Average standard deviation of split frequencies: 0.007679
611000 -- (-15585.179) [-15577.006] (-15580.777) (-15589.308) * (-15571.776) (-15587.952) (-15581.644) [-15590.350] -- 0:21:38
612000 -- [-15574.443] (-15583.511) (-15586.719) (-15584.470) * (-15586.692) (-15588.160) [-15587.995] (-15579.018) -- 0:21:34
613000 -- [-15587.853] (-15589.513) (-15585.731) (-15588.292) * (-15596.277) (-15590.424) (-15588.266) [-15570.780] -- 0:21:31
614000 -- (-15585.435) (-15580.205) (-15591.165) [-15587.166] * (-15578.354) [-15581.333] (-15589.781) (-15592.256) -- 0:21:28
615000 -- (-15587.456) (-15582.742) [-15576.260] (-15605.079) * (-15594.635) [-15586.164] (-15591.713) (-15571.589) -- 0:21:24
Average standard deviation of split frequencies: 0.007673
616000 -- (-15582.820) (-15585.800) [-15573.398] (-15584.999) * [-15577.253] (-15593.697) (-15579.433) (-15586.437) -- 0:21:21
617000 -- [-15575.359] (-15589.892) (-15588.257) (-15581.416) * (-15585.722) (-15579.783) (-15583.568) [-15594.535] -- 0:21:18
618000 -- (-15582.015) (-15574.740) [-15580.721] (-15582.734) * [-15586.389] (-15581.804) (-15576.071) (-15581.160) -- 0:21:14
619000 -- (-15586.706) [-15579.749] (-15582.239) (-15592.672) * [-15571.033] (-15591.972) (-15582.521) (-15598.665) -- 0:21:11
620000 -- [-15587.839] (-15583.333) (-15574.644) (-15583.647) * (-15585.426) [-15582.394] (-15578.858) (-15593.687) -- 0:21:08
Average standard deviation of split frequencies: 0.007576
621000 -- (-15586.914) (-15590.738) [-15587.342] (-15589.934) * [-15580.782] (-15591.454) (-15583.356) (-15589.219) -- 0:21:05
622000 -- [-15586.268] (-15592.269) (-15597.471) (-15570.870) * (-15587.153) (-15591.518) [-15584.713] (-15586.491) -- 0:21:02
623000 -- (-15598.088) (-15581.718) [-15583.844] (-15586.870) * [-15580.689] (-15585.348) (-15590.589) (-15584.336) -- 0:20:58
624000 -- (-15583.850) (-15589.389) (-15583.549) [-15579.585] * [-15580.149] (-15594.262) (-15589.816) (-15591.710) -- 0:20:55
625000 -- (-15585.727) (-15582.722) [-15579.660] (-15580.280) * (-15592.638) (-15594.298) (-15584.029) [-15580.829] -- 0:20:52
Average standard deviation of split frequencies: 0.007453
626000 -- (-15581.057) [-15576.732] (-15586.655) (-15579.279) * (-15588.910) [-15588.146] (-15598.074) (-15595.598) -- 0:20:48
627000 -- (-15581.216) [-15579.045] (-15584.873) (-15599.851) * (-15583.775) [-15583.295] (-15590.205) (-15598.113) -- 0:20:45
628000 -- [-15582.655] (-15599.684) (-15585.074) (-15591.642) * (-15605.991) (-15578.546) [-15585.782] (-15590.184) -- 0:20:42
629000 -- (-15588.377) [-15587.105] (-15583.662) (-15592.881) * (-15592.692) (-15574.502) [-15577.294] (-15583.203) -- 0:20:38
630000 -- (-15579.766) [-15588.578] (-15580.386) (-15587.570) * [-15579.346] (-15583.166) (-15601.263) (-15579.673) -- 0:20:35
Average standard deviation of split frequencies: 0.007341
631000 -- (-15586.633) (-15592.087) [-15591.067] (-15588.484) * [-15578.915] (-15581.114) (-15584.979) (-15578.092) -- 0:20:32
632000 -- (-15592.812) (-15588.187) [-15582.486] (-15582.621) * (-15588.436) (-15581.111) [-15581.585] (-15571.958) -- 0:20:28
633000 -- (-15584.325) (-15588.669) (-15572.175) [-15573.399] * (-15597.800) (-15581.604) (-15575.903) [-15581.623] -- 0:20:25
634000 -- (-15582.762) [-15581.560] (-15594.836) (-15588.101) * (-15593.855) (-15587.873) (-15587.100) [-15579.863] -- 0:20:22
635000 -- [-15582.829] (-15578.517) (-15601.271) (-15586.297) * [-15581.255] (-15592.847) (-15579.584) (-15576.334) -- 0:20:18
Average standard deviation of split frequencies: 0.007089
636000 -- [-15580.655] (-15587.089) (-15584.680) (-15581.094) * (-15586.681) (-15594.948) [-15579.071] (-15582.016) -- 0:20:15
637000 -- [-15574.771] (-15578.454) (-15594.804) (-15584.833) * (-15583.524) [-15585.318] (-15581.123) (-15595.798) -- 0:20:11
638000 -- (-15595.113) (-15589.482) [-15576.314] (-15599.620) * (-15581.842) (-15583.103) (-15573.457) [-15578.075] -- 0:20:08
639000 -- (-15602.884) (-15586.131) [-15586.451] (-15601.268) * (-15593.568) [-15575.984] (-15581.851) (-15586.091) -- 0:20:05
640000 -- (-15585.461) [-15570.739] (-15588.223) (-15590.748) * (-15578.088) [-15575.573] (-15587.546) (-15584.402) -- 0:20:01
Average standard deviation of split frequencies: 0.007415
641000 -- (-15588.746) (-15583.402) (-15580.687) [-15583.444] * [-15577.566] (-15589.409) (-15596.485) (-15602.184) -- 0:19:57
642000 -- (-15588.305) (-15582.563) (-15584.174) [-15572.452] * [-15578.723] (-15584.679) (-15590.550) (-15582.227) -- 0:19:55
643000 -- (-15587.837) (-15589.999) (-15593.170) [-15592.410] * (-15602.070) (-15589.542) [-15577.909] (-15595.489) -- 0:19:51
644000 -- (-15592.328) (-15586.518) [-15582.434] (-15575.703) * (-15588.335) [-15580.696] (-15583.911) (-15592.404) -- 0:19:47
645000 -- [-15580.375] (-15574.856) (-15578.174) (-15576.616) * (-15580.643) (-15597.929) (-15590.956) [-15578.439] -- 0:19:44
Average standard deviation of split frequencies: 0.007279
646000 -- (-15592.947) (-15595.875) (-15587.041) [-15578.174] * [-15583.115] (-15605.065) (-15580.283) (-15581.511) -- 0:19:41
647000 -- (-15589.474) (-15571.248) (-15581.763) [-15579.429] * (-15576.615) [-15585.304] (-15599.141) (-15571.998) -- 0:19:37
648000 -- (-15590.744) (-15573.651) (-15590.204) [-15577.905] * [-15579.949] (-15579.229) (-15597.125) (-15583.794) -- 0:19:34
649000 -- (-15591.073) [-15577.247] (-15595.443) (-15576.317) * [-15580.496] (-15593.989) (-15590.849) (-15580.017) -- 0:19:31
650000 -- [-15582.296] (-15588.019) (-15576.627) (-15583.399) * (-15585.339) (-15579.603) (-15589.968) [-15584.723] -- 0:19:27
Average standard deviation of split frequencies: 0.007449
651000 -- (-15580.491) (-15575.370) [-15579.385] (-15602.510) * [-15576.620] (-15589.537) (-15583.167) (-15584.431) -- 0:19:24
652000 -- (-15589.059) (-15589.271) [-15575.320] (-15574.538) * (-15584.426) (-15576.989) (-15590.957) [-15580.204] -- 0:19:21
653000 -- (-15590.401) (-15596.138) (-15579.425) [-15583.391] * (-15577.062) [-15575.535] (-15588.673) (-15590.827) -- 0:19:17
654000 -- (-15583.759) (-15588.155) [-15578.636] (-15581.030) * (-15577.292) (-15581.477) [-15577.816] (-15600.195) -- 0:19:14
655000 -- (-15577.680) (-15598.445) [-15578.178] (-15580.411) * [-15578.199] (-15589.669) (-15591.121) (-15580.983) -- 0:19:10
Average standard deviation of split frequencies: 0.007536
656000 -- [-15578.731] (-15591.943) (-15584.012) (-15577.418) * [-15591.079] (-15583.407) (-15587.302) (-15587.697) -- 0:19:07
657000 -- (-15584.592) (-15592.017) [-15574.879] (-15593.048) * (-15577.676) (-15582.125) (-15582.085) [-15584.460] -- 0:19:04
658000 -- [-15583.044] (-15588.784) (-15580.966) (-15584.179) * (-15584.499) [-15584.728] (-15581.111) (-15586.418) -- 0:19:00
659000 -- (-15593.065) (-15595.869) [-15573.927] (-15584.556) * [-15574.964] (-15581.370) (-15580.579) (-15586.114) -- 0:18:57
660000 -- [-15582.957] (-15589.510) (-15583.202) (-15588.530) * (-15587.972) (-15584.631) [-15579.322] (-15586.407) -- 0:18:54
Average standard deviation of split frequencies: 0.007593
661000 -- (-15574.173) (-15587.338) (-15599.271) [-15579.366] * (-15585.600) [-15581.693] (-15584.500) (-15586.757) -- 0:18:50
662000 -- [-15578.169] (-15595.210) (-15585.134) (-15579.039) * (-15587.678) [-15583.130] (-15589.015) (-15598.253) -- 0:18:47
663000 -- (-15601.888) (-15581.404) (-15591.420) [-15576.809] * (-15578.781) (-15587.820) (-15589.965) [-15572.740] -- 0:18:44
664000 -- [-15586.314] (-15583.288) (-15585.142) (-15581.781) * (-15587.250) [-15572.946] (-15587.949) (-15586.497) -- 0:18:40
665000 -- (-15589.659) (-15590.531) (-15594.325) [-15581.602] * (-15592.801) (-15589.587) [-15577.433] (-15577.271) -- 0:18:37
Average standard deviation of split frequencies: 0.007550
666000 -- (-15579.347) (-15583.677) [-15590.403] (-15581.874) * (-15584.839) (-15590.805) (-15581.649) [-15584.762] -- 0:18:34
667000 -- (-15606.798) (-15584.264) (-15580.141) [-15582.173] * (-15589.834) [-15580.750] (-15604.549) (-15585.860) -- 0:18:30
668000 -- (-15593.847) (-15589.285) (-15581.604) [-15574.592] * [-15579.596] (-15582.764) (-15600.726) (-15590.860) -- 0:18:27
669000 -- (-15590.045) [-15576.026] (-15580.232) (-15584.426) * (-15586.497) [-15577.929] (-15601.891) (-15580.523) -- 0:18:24
670000 -- (-15581.578) (-15576.171) (-15586.059) [-15591.023] * (-15612.205) (-15578.406) [-15581.876] (-15590.254) -- 0:18:20
Average standard deviation of split frequencies: 0.007516
671000 -- (-15577.015) (-15602.164) [-15581.500] (-15583.565) * (-15580.573) (-15581.150) [-15585.824] (-15582.729) -- 0:18:17
672000 -- (-15606.099) (-15586.030) [-15586.433] (-15585.005) * (-15600.572) (-15579.231) [-15584.098] (-15588.263) -- 0:18:14
673000 -- (-15580.439) (-15581.556) [-15581.968] (-15585.200) * (-15591.724) (-15578.520) [-15585.950] (-15588.152) -- 0:18:11
674000 -- (-15580.822) [-15581.228] (-15587.773) (-15584.855) * (-15580.805) [-15596.580] (-15584.727) (-15575.067) -- 0:18:07
675000 -- (-15586.629) (-15581.044) (-15583.568) [-15580.634] * (-15583.705) (-15596.711) [-15596.189] (-15584.096) -- 0:18:04
Average standard deviation of split frequencies: 0.007134
676000 -- [-15591.737] (-15586.866) (-15589.957) (-15579.754) * [-15579.305] (-15581.893) (-15582.896) (-15583.734) -- 0:18:00
677000 -- (-15585.819) [-15584.104] (-15584.507) (-15584.167) * (-15581.196) (-15578.985) (-15592.943) [-15576.014] -- 0:17:57
678000 -- (-15616.754) (-15594.264) (-15595.864) [-15574.353] * [-15576.780] (-15594.120) (-15595.915) (-15590.054) -- 0:17:54
679000 -- (-15596.608) (-15581.534) [-15581.060] (-15594.226) * [-15581.350] (-15583.071) (-15581.291) (-15584.128) -- 0:17:50
680000 -- [-15579.401] (-15591.718) (-15585.091) (-15580.846) * (-15588.705) (-15576.513) [-15580.668] (-15582.206) -- 0:17:47
Average standard deviation of split frequencies: 0.006890
681000 -- (-15586.382) [-15584.722] (-15583.149) (-15584.058) * (-15582.715) (-15577.593) [-15585.376] (-15586.238) -- 0:17:44
682000 -- (-15592.478) [-15575.608] (-15582.488) (-15584.032) * (-15575.724) (-15581.399) [-15581.172] (-15588.736) -- 0:17:40
683000 -- (-15591.252) (-15578.786) (-15590.538) [-15578.750] * [-15575.512] (-15597.316) (-15596.409) (-15589.000) -- 0:17:37
684000 -- (-15581.748) [-15575.515] (-15585.667) (-15588.533) * [-15580.323] (-15583.962) (-15594.080) (-15590.364) -- 0:17:34
685000 -- (-15584.448) [-15575.356] (-15582.317) (-15584.364) * (-15582.393) (-15588.496) (-15591.193) [-15592.168] -- 0:17:30
Average standard deviation of split frequencies: 0.006889
686000 -- (-15587.532) [-15582.254] (-15581.679) (-15584.548) * [-15577.530] (-15595.135) (-15576.214) (-15578.063) -- 0:17:27
687000 -- (-15597.307) (-15582.646) (-15591.318) [-15586.519] * (-15574.121) [-15582.020] (-15582.114) (-15581.024) -- 0:17:24
688000 -- [-15584.650] (-15582.762) (-15586.462) (-15586.550) * (-15579.238) [-15580.025] (-15594.503) (-15589.105) -- 0:17:20
689000 -- [-15577.338] (-15587.698) (-15586.437) (-15581.990) * [-15584.638] (-15590.690) (-15592.495) (-15577.181) -- 0:17:17
690000 -- (-15588.719) [-15574.299] (-15594.240) (-15593.068) * [-15574.367] (-15585.651) (-15593.566) (-15576.621) -- 0:17:14
Average standard deviation of split frequencies: 0.006738
691000 -- (-15580.221) [-15576.547] (-15593.239) (-15585.349) * (-15581.663) (-15590.396) (-15583.306) [-15570.307] -- 0:17:10
692000 -- (-15581.142) (-15584.032) [-15590.041] (-15583.218) * (-15600.981) [-15582.235] (-15592.224) (-15589.960) -- 0:17:07
693000 -- (-15571.262) [-15579.904] (-15590.723) (-15593.720) * (-15604.413) (-15588.943) (-15580.496) [-15584.776] -- 0:17:04
694000 -- (-15581.753) (-15587.577) (-15578.511) [-15578.345] * (-15589.510) (-15582.916) [-15583.588] (-15584.833) -- 0:17:00
695000 -- [-15584.240] (-15583.524) (-15600.291) (-15583.152) * (-15588.733) (-15575.543) [-15587.938] (-15586.149) -- 0:16:57
Average standard deviation of split frequencies: 0.006877
696000 -- (-15593.976) (-15588.630) [-15584.786] (-15595.986) * (-15595.832) (-15584.410) (-15584.606) [-15579.927] -- 0:16:54
697000 -- (-15592.361) (-15575.848) (-15582.486) [-15573.468] * (-15589.480) (-15590.257) [-15578.334] (-15575.022) -- 0:16:50
698000 -- (-15584.501) (-15582.988) [-15579.547] (-15585.446) * (-15581.933) (-15579.003) [-15583.421] (-15582.548) -- 0:16:47
699000 -- [-15578.098] (-15597.419) (-15588.204) (-15594.903) * (-15586.862) (-15587.265) (-15580.601) [-15579.494] -- 0:16:44
700000 -- [-15583.268] (-15589.443) (-15589.305) (-15575.578) * [-15573.896] (-15580.015) (-15582.653) (-15599.761) -- 0:16:41
Average standard deviation of split frequencies: 0.006693
701000 -- [-15578.350] (-15584.757) (-15597.629) (-15574.312) * (-15576.485) (-15592.307) (-15586.258) [-15602.727] -- 0:16:37
702000 -- [-15582.692] (-15596.394) (-15574.822) (-15583.860) * (-15568.979) (-15580.198) (-15593.505) [-15582.557] -- 0:16:34
703000 -- (-15590.430) (-15588.306) [-15583.610] (-15592.840) * (-15573.046) (-15602.787) [-15578.068] (-15569.542) -- 0:16:31
704000 -- [-15589.552] (-15591.471) (-15582.752) (-15578.191) * (-15579.946) (-15589.113) [-15575.573] (-15583.954) -- 0:16:28
705000 -- (-15581.014) (-15579.608) (-15578.944) [-15582.304] * [-15582.693] (-15583.824) (-15579.267) (-15585.461) -- 0:16:24
Average standard deviation of split frequencies: 0.007139
706000 -- [-15580.656] (-15581.154) (-15586.302) (-15592.042) * (-15585.233) (-15591.132) (-15586.024) [-15574.653] -- 0:16:21
707000 -- (-15585.312) (-15604.742) (-15589.575) [-15582.798] * (-15598.197) (-15583.994) (-15585.928) [-15581.763] -- 0:16:18
708000 -- [-15582.630] (-15590.233) (-15580.179) (-15580.397) * (-15596.921) (-15579.123) (-15604.173) [-15582.536] -- 0:16:14
709000 -- (-15576.981) (-15578.263) [-15583.100] (-15595.439) * (-15591.376) (-15580.829) (-15589.961) [-15586.727] -- 0:16:11
710000 -- (-15586.618) (-15578.715) [-15589.174] (-15582.827) * [-15583.826] (-15587.912) (-15588.145) (-15595.889) -- 0:16:08
Average standard deviation of split frequencies: 0.006854
711000 -- [-15585.887] (-15587.038) (-15587.763) (-15590.029) * (-15596.428) (-15580.334) [-15573.636] (-15599.273) -- 0:16:04
712000 -- [-15580.698] (-15598.584) (-15594.578) (-15593.092) * (-15587.433) (-15576.154) (-15583.353) [-15588.905] -- 0:16:01
713000 -- (-15589.930) [-15585.372] (-15589.029) (-15582.578) * (-15581.274) [-15575.754] (-15602.841) (-15586.480) -- 0:15:58
714000 -- (-15574.447) [-15585.600] (-15587.503) (-15584.268) * (-15582.943) (-15590.223) (-15586.672) [-15583.738] -- 0:15:54
715000 -- [-15580.401] (-15577.569) (-15588.592) (-15592.821) * (-15584.098) [-15594.592] (-15578.879) (-15585.937) -- 0:15:51
Average standard deviation of split frequencies: 0.007276
716000 -- [-15585.948] (-15581.414) (-15596.774) (-15602.176) * (-15590.053) (-15589.501) (-15592.966) [-15577.640] -- 0:15:48
717000 -- [-15577.147] (-15586.049) (-15591.953) (-15593.093) * (-15592.258) [-15572.556] (-15581.529) (-15578.809) -- 0:15:44
718000 -- (-15594.461) (-15588.191) [-15575.275] (-15579.656) * (-15588.183) (-15587.477) [-15574.131] (-15581.782) -- 0:15:41
719000 -- (-15598.734) (-15580.283) (-15573.362) [-15579.910] * [-15575.375] (-15579.332) (-15577.365) (-15582.068) -- 0:15:38
720000 -- (-15589.454) (-15593.909) [-15571.985] (-15575.448) * [-15579.520] (-15578.776) (-15583.351) (-15581.370) -- 0:15:34
Average standard deviation of split frequencies: 0.007229
721000 -- (-15584.525) (-15585.688) (-15583.572) [-15580.810] * (-15591.237) (-15583.219) (-15585.019) [-15578.697] -- 0:15:31
722000 -- (-15590.297) [-15574.499] (-15578.638) (-15592.715) * (-15579.810) [-15595.329] (-15580.983) (-15585.458) -- 0:15:28
723000 -- [-15586.393] (-15587.159) (-15581.231) (-15598.800) * (-15575.789) (-15580.021) [-15580.346] (-15582.142) -- 0:15:24
724000 -- (-15585.228) [-15574.554] (-15592.838) (-15592.364) * (-15585.704) (-15591.747) [-15574.636] (-15581.063) -- 0:15:21
725000 -- (-15589.814) [-15581.870] (-15581.160) (-15615.083) * (-15581.442) (-15595.238) (-15576.777) [-15583.993] -- 0:15:18
Average standard deviation of split frequencies: 0.007426
726000 -- (-15587.346) [-15574.676] (-15574.363) (-15600.151) * (-15587.225) (-15576.508) (-15580.418) [-15581.225] -- 0:15:14
727000 -- [-15577.751] (-15582.668) (-15586.262) (-15576.132) * (-15588.797) [-15579.039] (-15586.652) (-15588.817) -- 0:15:11
728000 -- [-15585.104] (-15590.527) (-15584.455) (-15575.617) * [-15589.091] (-15588.798) (-15583.252) (-15587.055) -- 0:15:07
729000 -- (-15578.293) [-15583.585] (-15589.565) (-15582.111) * (-15578.916) [-15585.627] (-15579.086) (-15593.112) -- 0:15:04
730000 -- (-15578.621) (-15587.518) (-15596.991) [-15576.614] * [-15583.645] (-15592.001) (-15582.604) (-15598.453) -- 0:15:01
Average standard deviation of split frequencies: 0.007378
731000 -- (-15598.099) (-15584.993) [-15584.925] (-15580.753) * [-15587.947] (-15592.033) (-15579.354) (-15593.854) -- 0:14:58
732000 -- (-15588.414) (-15589.962) [-15580.575] (-15594.639) * (-15581.351) (-15581.922) [-15576.472] (-15596.046) -- 0:14:54
733000 -- (-15582.336) (-15586.220) [-15592.743] (-15587.610) * (-15593.210) (-15572.191) [-15575.046] (-15587.536) -- 0:14:51
734000 -- (-15578.217) (-15577.081) [-15579.570] (-15582.620) * (-15583.966) (-15571.516) (-15582.448) [-15578.087] -- 0:14:48
735000 -- [-15579.915] (-15571.832) (-15577.353) (-15600.739) * (-15602.733) (-15591.679) (-15577.922) [-15578.198] -- 0:14:44
Average standard deviation of split frequencies: 0.007325
736000 -- [-15597.367] (-15592.582) (-15587.509) (-15590.851) * (-15594.376) [-15582.652] (-15591.448) (-15580.361) -- 0:14:41
737000 -- (-15581.149) (-15589.718) [-15578.852] (-15593.922) * [-15589.411] (-15591.340) (-15586.137) (-15579.374) -- 0:14:38
738000 -- (-15586.994) [-15587.413] (-15606.803) (-15596.123) * (-15581.356) (-15601.575) (-15586.775) [-15577.196] -- 0:14:34
739000 -- (-15583.905) (-15587.597) (-15585.368) [-15580.084] * [-15572.963] (-15593.594) (-15580.305) (-15599.049) -- 0:14:31
740000 -- [-15591.757] (-15586.093) (-15594.549) (-15594.198) * (-15580.167) (-15583.301) [-15597.948] (-15592.039) -- 0:14:28
Average standard deviation of split frequencies: 0.007213
741000 -- (-15582.425) (-15588.877) (-15593.207) [-15588.336] * (-15593.921) [-15585.580] (-15596.995) (-15572.887) -- 0:14:24
742000 -- (-15586.817) (-15588.517) [-15587.895] (-15586.752) * (-15585.935) (-15597.011) (-15605.301) [-15578.703] -- 0:14:21
743000 -- (-15582.789) (-15581.112) (-15587.216) [-15576.257] * (-15581.586) (-15581.815) [-15579.098] (-15589.292) -- 0:14:18
744000 -- (-15583.760) [-15585.223] (-15588.828) (-15585.945) * (-15586.411) (-15587.519) [-15585.422] (-15587.951) -- 0:14:14
745000 -- (-15590.473) [-15578.776] (-15588.669) (-15592.604) * (-15585.719) [-15581.229] (-15595.271) (-15576.830) -- 0:14:11
Average standard deviation of split frequencies: 0.007097
746000 -- [-15581.900] (-15590.559) (-15573.660) (-15580.651) * (-15575.950) [-15588.666] (-15584.281) (-15585.202) -- 0:14:08
747000 -- (-15587.665) (-15590.340) (-15594.337) [-15581.823] * [-15574.598] (-15594.476) (-15590.145) (-15572.742) -- 0:14:04
748000 -- (-15586.999) (-15584.316) (-15581.601) [-15578.162] * [-15576.161] (-15597.037) (-15583.772) (-15576.458) -- 0:14:01
749000 -- (-15582.538) (-15587.278) (-15588.454) [-15581.981] * (-15595.202) (-15599.154) (-15592.015) [-15579.037] -- 0:13:58
750000 -- (-15582.462) (-15575.316) (-15586.989) [-15585.781] * [-15582.662] (-15586.316) (-15582.348) (-15569.842) -- 0:13:54
Average standard deviation of split frequencies: 0.007021
751000 -- (-15578.577) [-15580.684] (-15585.283) (-15587.538) * (-15584.564) [-15581.053] (-15585.640) (-15575.980) -- 0:13:51
752000 -- [-15580.809] (-15591.881) (-15579.019) (-15591.236) * (-15594.564) (-15584.219) [-15571.763] (-15586.035) -- 0:13:48
753000 -- (-15583.275) (-15600.530) (-15586.745) [-15581.945] * (-15600.984) (-15590.004) [-15582.441] (-15597.022) -- 0:13:44
754000 -- (-15586.633) (-15580.786) (-15578.158) [-15574.164] * (-15590.139) [-15577.726] (-15583.875) (-15583.456) -- 0:13:41
755000 -- (-15589.730) (-15581.119) (-15587.499) [-15578.890] * (-15588.331) (-15584.545) (-15579.430) [-15582.502] -- 0:13:38
Average standard deviation of split frequencies: 0.006859
756000 -- (-15571.916) [-15575.499] (-15585.024) (-15576.482) * (-15574.289) (-15592.567) [-15572.509] (-15590.649) -- 0:13:34
757000 -- [-15574.329] (-15580.059) (-15578.923) (-15592.165) * (-15586.155) (-15581.487) (-15596.085) [-15579.883] -- 0:13:31
758000 -- (-15571.388) [-15580.119] (-15583.538) (-15581.473) * (-15592.558) (-15585.751) (-15586.309) [-15581.772] -- 0:13:28
759000 -- (-15582.765) (-15574.678) (-15590.469) [-15581.016] * (-15580.899) (-15579.146) (-15586.249) [-15588.444] -- 0:13:24
760000 -- (-15582.654) [-15580.361] (-15589.968) (-15586.873) * [-15569.254] (-15599.870) (-15591.076) (-15586.427) -- 0:13:21
Average standard deviation of split frequencies: 0.007087
761000 -- (-15584.883) [-15580.152] (-15577.622) (-15580.882) * (-15593.128) [-15578.102] (-15592.054) (-15584.800) -- 0:13:18
762000 -- (-15585.929) [-15579.944] (-15574.369) (-15583.643) * [-15570.810] (-15588.115) (-15584.480) (-15574.340) -- 0:13:14
763000 -- (-15581.303) (-15584.092) (-15580.565) [-15573.547] * [-15584.470] (-15588.375) (-15594.135) (-15597.922) -- 0:13:11
764000 -- [-15581.025] (-15585.926) (-15577.840) (-15574.668) * (-15603.417) (-15586.136) [-15583.413] (-15577.870) -- 0:13:08
765000 -- (-15584.124) (-15593.281) (-15582.645) [-15582.677] * [-15598.974] (-15581.882) (-15581.893) (-15578.251) -- 0:13:04
Average standard deviation of split frequencies: 0.007022
766000 -- (-15582.343) [-15595.103] (-15583.684) (-15579.632) * [-15587.143] (-15586.688) (-15592.936) (-15585.183) -- 0:13:01
767000 -- (-15582.840) (-15592.642) (-15602.365) [-15576.976] * (-15585.706) (-15581.632) [-15591.458] (-15581.556) -- 0:12:58
768000 -- [-15576.573] (-15581.132) (-15586.743) (-15581.019) * (-15579.813) (-15600.156) (-15582.333) [-15572.224] -- 0:12:54
769000 -- (-15597.321) (-15579.607) [-15591.585] (-15595.288) * (-15575.343) (-15596.379) (-15584.844) [-15571.267] -- 0:12:51
770000 -- (-15597.749) (-15589.092) [-15587.988] (-15587.947) * (-15582.485) (-15577.673) (-15587.396) [-15580.519] -- 0:12:48
Average standard deviation of split frequencies: 0.007152
771000 -- [-15581.418] (-15578.604) (-15594.412) (-15589.309) * (-15591.397) [-15578.276] (-15598.343) (-15598.863) -- 0:12:44
772000 -- (-15584.195) (-15576.540) (-15592.327) [-15578.535] * (-15586.839) [-15587.261] (-15578.037) (-15585.319) -- 0:12:41
773000 -- (-15589.003) (-15595.189) (-15588.412) [-15583.213] * (-15588.230) (-15574.894) (-15584.744) [-15573.991] -- 0:12:38
774000 -- (-15589.712) [-15584.991] (-15594.505) (-15588.183) * (-15583.230) [-15582.182] (-15585.581) (-15591.813) -- 0:12:34
775000 -- (-15577.830) (-15582.777) (-15583.465) [-15583.260] * (-15598.443) (-15582.716) [-15576.971] (-15594.626) -- 0:12:31
Average standard deviation of split frequencies: 0.007056
776000 -- (-15587.881) [-15598.072] (-15593.841) (-15606.729) * (-15592.894) [-15586.347] (-15579.959) (-15581.388) -- 0:12:28
777000 -- (-15584.940) (-15597.871) (-15577.803) [-15581.855] * [-15584.229] (-15594.955) (-15589.302) (-15588.634) -- 0:12:24
778000 -- (-15588.219) [-15585.281] (-15589.556) (-15579.244) * (-15581.039) (-15588.344) (-15598.533) [-15585.276] -- 0:12:21
779000 -- (-15590.943) (-15588.289) [-15579.788] (-15586.228) * (-15577.677) (-15592.074) (-15590.922) [-15580.064] -- 0:12:18
780000 -- (-15582.529) (-15587.462) (-15582.081) [-15582.554] * (-15592.563) (-15588.943) [-15583.284] (-15577.589) -- 0:12:15
Average standard deviation of split frequencies: 0.007370
781000 -- (-15582.632) (-15590.579) [-15583.673] (-15585.568) * (-15587.392) [-15579.948] (-15595.337) (-15587.099) -- 0:12:11
782000 -- (-15582.539) (-15599.445) [-15571.511] (-15583.893) * (-15594.744) [-15575.396] (-15585.677) (-15588.195) -- 0:12:08
783000 -- (-15592.500) (-15601.001) [-15579.588] (-15587.825) * (-15582.700) (-15577.315) [-15576.850] (-15597.983) -- 0:12:04
784000 -- (-15581.647) [-15594.718] (-15584.849) (-15599.869) * [-15589.917] (-15580.394) (-15576.979) (-15583.958) -- 0:12:01
785000 -- (-15593.538) [-15592.239] (-15577.176) (-15590.618) * (-15604.483) (-15588.566) [-15574.728] (-15587.890) -- 0:11:58
Average standard deviation of split frequencies: 0.007335
786000 -- (-15601.729) (-15592.881) (-15580.030) [-15569.876] * (-15581.974) (-15585.029) [-15575.625] (-15599.165) -- 0:11:54
787000 -- (-15583.217) [-15578.656] (-15596.670) (-15578.875) * (-15583.651) (-15589.608) (-15582.922) [-15581.823] -- 0:11:51
788000 -- (-15584.528) [-15584.365] (-15591.757) (-15582.176) * (-15584.322) (-15585.327) (-15586.952) [-15585.050] -- 0:11:48
789000 -- (-15583.838) (-15586.371) [-15581.367] (-15579.022) * [-15588.722] (-15577.520) (-15589.227) (-15596.086) -- 0:11:44
790000 -- [-15584.233] (-15584.673) (-15580.348) (-15590.538) * [-15577.225] (-15570.412) (-15581.395) (-15592.482) -- 0:11:41
Average standard deviation of split frequencies: 0.007262
791000 -- [-15587.415] (-15587.723) (-15580.648) (-15595.183) * (-15580.443) (-15576.949) [-15582.959] (-15593.194) -- 0:11:38
792000 -- [-15586.991] (-15590.690) (-15591.891) (-15583.248) * (-15580.074) (-15587.153) (-15586.634) [-15579.641] -- 0:11:34
793000 -- [-15595.297] (-15589.915) (-15586.047) (-15606.500) * [-15585.753] (-15587.477) (-15572.382) (-15587.057) -- 0:11:31
794000 -- (-15595.488) [-15580.714] (-15588.080) (-15586.719) * (-15588.284) (-15583.822) [-15569.632] (-15603.404) -- 0:11:28
795000 -- (-15592.883) [-15585.605] (-15584.547) (-15588.475) * [-15582.167] (-15569.703) (-15584.277) (-15580.096) -- 0:11:24
Average standard deviation of split frequencies: 0.007350
796000 -- (-15580.109) [-15578.730] (-15586.192) (-15594.771) * (-15604.959) (-15586.551) (-15578.552) [-15577.317] -- 0:11:21
797000 -- (-15586.585) [-15573.938] (-15588.490) (-15599.441) * [-15585.597] (-15580.876) (-15577.129) (-15589.913) -- 0:11:18
798000 -- [-15575.703] (-15590.964) (-15582.285) (-15598.203) * [-15578.687] (-15583.071) (-15582.173) (-15591.731) -- 0:11:14
799000 -- (-15573.494) [-15581.981] (-15592.306) (-15576.254) * (-15599.590) (-15597.483) (-15585.012) [-15584.877] -- 0:11:11
800000 -- (-15603.447) [-15573.517] (-15587.117) (-15581.968) * (-15590.259) (-15581.203) (-15577.795) [-15585.805] -- 0:11:08
Average standard deviation of split frequencies: 0.007231
801000 -- (-15582.563) (-15573.476) (-15590.197) [-15576.910] * [-15574.592] (-15582.752) (-15589.830) (-15588.401) -- 0:11:04
802000 -- (-15580.136) (-15583.248) (-15605.200) [-15576.026] * (-15577.499) (-15588.945) (-15575.912) [-15579.023] -- 0:11:01
803000 -- (-15592.652) (-15589.095) (-15597.675) [-15573.048] * (-15585.925) (-15592.712) [-15577.689] (-15586.935) -- 0:10:57
804000 -- (-15584.517) (-15580.669) [-15573.995] (-15579.134) * [-15570.167] (-15588.811) (-15590.890) (-15581.866) -- 0:10:54
805000 -- (-15582.052) [-15573.270] (-15586.909) (-15580.665) * (-15581.864) (-15588.863) (-15586.074) [-15581.396] -- 0:10:51
Average standard deviation of split frequencies: 0.007153
806000 -- (-15580.827) (-15587.053) [-15576.559] (-15580.185) * (-15597.760) [-15579.852] (-15590.467) (-15590.546) -- 0:10:47
807000 -- (-15588.272) [-15582.825] (-15574.073) (-15603.062) * (-15586.155) (-15577.953) (-15576.313) [-15581.035] -- 0:10:44
808000 -- (-15578.183) [-15582.331] (-15579.100) (-15587.424) * [-15583.835] (-15577.690) (-15583.077) (-15596.670) -- 0:10:41
809000 -- (-15592.794) (-15582.016) (-15605.857) [-15577.645] * (-15591.002) [-15578.995] (-15579.778) (-15586.809) -- 0:10:37
810000 -- (-15580.586) [-15573.689] (-15579.239) (-15579.785) * (-15577.068) (-15590.668) [-15584.318] (-15587.405) -- 0:10:34
Average standard deviation of split frequencies: 0.007067
811000 -- (-15588.920) (-15591.280) [-15583.208] (-15589.935) * (-15584.787) (-15586.470) [-15576.893] (-15597.183) -- 0:10:31
812000 -- (-15585.938) [-15582.762] (-15584.648) (-15591.090) * [-15574.823] (-15582.579) (-15593.105) (-15580.924) -- 0:10:27
813000 -- [-15588.448] (-15576.169) (-15591.278) (-15594.577) * (-15574.626) (-15586.655) (-15595.483) [-15589.359] -- 0:10:24
814000 -- [-15587.108] (-15588.241) (-15586.453) (-15579.844) * [-15574.730] (-15577.317) (-15589.332) (-15586.348) -- 0:10:21
815000 -- (-15601.051) (-15593.425) (-15596.541) [-15585.583] * [-15577.811] (-15592.543) (-15587.165) (-15581.625) -- 0:10:17
Average standard deviation of split frequencies: 0.007140
816000 -- (-15573.748) (-15605.631) (-15584.733) [-15585.805] * (-15583.922) (-15589.562) (-15583.712) [-15581.888] -- 0:10:14
817000 -- (-15599.249) [-15577.569] (-15589.926) (-15576.980) * [-15576.339] (-15578.538) (-15581.654) (-15582.665) -- 0:10:11
818000 -- (-15588.842) [-15583.434] (-15578.402) (-15583.486) * (-15587.658) [-15591.615] (-15586.440) (-15589.961) -- 0:10:07
819000 -- [-15583.994] (-15588.368) (-15597.648) (-15583.170) * (-15583.477) (-15586.429) [-15584.302] (-15583.577) -- 0:10:04
820000 -- (-15587.987) (-15599.847) (-15576.722) [-15581.061] * (-15581.541) [-15575.858] (-15581.106) (-15576.565) -- 0:10:01
Average standard deviation of split frequencies: 0.007026
821000 -- (-15590.763) (-15583.783) (-15573.284) [-15587.205] * [-15577.320] (-15585.066) (-15599.880) (-15587.658) -- 0:09:57
822000 -- (-15584.716) (-15579.344) (-15583.055) [-15585.094] * (-15587.058) (-15590.333) (-15589.809) [-15580.391] -- 0:09:54
823000 -- [-15586.733] (-15590.512) (-15601.968) (-15582.527) * [-15575.115] (-15587.835) (-15585.069) (-15577.120) -- 0:09:51
824000 -- (-15591.119) (-15588.543) (-15582.174) [-15583.882] * (-15573.813) [-15590.252] (-15579.452) (-15575.584) -- 0:09:47
825000 -- [-15586.216] (-15586.822) (-15584.002) (-15594.376) * [-15571.440] (-15593.500) (-15590.556) (-15590.218) -- 0:09:44
Average standard deviation of split frequencies: 0.006951
826000 -- [-15579.520] (-15585.644) (-15586.860) (-15582.091) * (-15591.856) (-15584.313) [-15580.528] (-15587.136) -- 0:09:41
827000 -- (-15585.071) [-15578.356] (-15582.846) (-15588.830) * (-15582.740) (-15581.630) [-15572.079] (-15580.440) -- 0:09:37
828000 -- [-15582.311] (-15577.905) (-15595.298) (-15588.803) * (-15574.300) (-15588.303) (-15579.512) [-15583.773] -- 0:09:34
829000 -- (-15577.613) (-15574.471) [-15580.107] (-15598.335) * [-15583.889] (-15586.248) (-15597.643) (-15586.960) -- 0:09:31
830000 -- (-15584.763) [-15576.483] (-15582.646) (-15591.293) * (-15586.682) [-15584.081] (-15580.458) (-15583.005) -- 0:09:27
Average standard deviation of split frequencies: 0.006694
831000 -- [-15582.279] (-15575.783) (-15578.589) (-15590.697) * (-15580.948) (-15591.241) [-15572.683] (-15587.067) -- 0:09:24
832000 -- (-15581.997) (-15584.918) [-15588.441] (-15583.500) * (-15585.590) (-15577.050) [-15580.633] (-15591.156) -- 0:09:21
833000 -- (-15596.018) [-15580.445] (-15590.661) (-15592.882) * (-15589.014) (-15582.300) [-15581.183] (-15592.732) -- 0:09:17
834000 -- (-15592.013) [-15579.224] (-15597.480) (-15582.289) * (-15586.219) (-15585.637) (-15594.459) [-15581.027] -- 0:09:14
835000 -- [-15572.833] (-15594.652) (-15601.701) (-15583.616) * (-15580.744) [-15579.128] (-15591.283) (-15575.857) -- 0:09:11
Average standard deviation of split frequencies: 0.006911
836000 -- (-15579.201) [-15586.663] (-15600.366) (-15577.707) * (-15580.773) (-15571.075) [-15588.886] (-15584.344) -- 0:09:07
837000 -- (-15594.458) (-15593.152) (-15584.151) [-15570.731] * [-15582.688] (-15581.994) (-15592.979) (-15579.486) -- 0:09:04
838000 -- (-15589.798) [-15579.343] (-15582.412) (-15586.436) * (-15590.281) (-15579.177) [-15579.952] (-15596.982) -- 0:09:01
839000 -- (-15575.180) (-15582.163) [-15579.392] (-15581.594) * [-15580.334] (-15595.470) (-15578.968) (-15578.280) -- 0:08:57
840000 -- [-15574.677] (-15578.092) (-15572.313) (-15588.189) * [-15595.272] (-15583.766) (-15593.539) (-15580.862) -- 0:08:54
Average standard deviation of split frequencies: 0.006787
841000 -- [-15576.509] (-15595.088) (-15592.190) (-15578.525) * (-15583.478) (-15580.879) [-15576.191] (-15584.525) -- 0:08:51
842000 -- [-15573.793] (-15587.844) (-15593.607) (-15599.890) * (-15577.287) (-15584.685) [-15582.652] (-15590.376) -- 0:08:47
843000 -- (-15575.338) (-15583.988) (-15572.351) [-15578.131] * [-15585.263] (-15572.869) (-15586.770) (-15593.891) -- 0:08:44
844000 -- (-15580.832) (-15592.417) [-15574.586] (-15593.507) * (-15582.760) (-15585.193) [-15581.495] (-15588.728) -- 0:08:41
845000 -- (-15576.381) (-15593.027) [-15570.209] (-15583.497) * [-15580.610] (-15579.543) (-15583.643) (-15584.841) -- 0:08:37
Average standard deviation of split frequencies: 0.006772
846000 -- (-15593.403) (-15601.996) [-15578.144] (-15591.113) * (-15594.200) [-15580.114] (-15584.642) (-15591.499) -- 0:08:34
847000 -- (-15589.264) (-15581.677) (-15589.484) [-15579.110] * [-15580.472] (-15597.691) (-15578.159) (-15593.504) -- 0:08:31
848000 -- (-15594.375) (-15585.212) (-15580.601) [-15583.508] * (-15601.542) (-15588.311) (-15591.101) [-15582.447] -- 0:08:27
849000 -- (-15575.743) (-15584.994) [-15584.468] (-15580.872) * [-15585.918] (-15586.380) (-15591.774) (-15580.008) -- 0:08:24
850000 -- (-15577.285) (-15597.128) (-15593.932) [-15587.442] * (-15591.435) (-15586.066) [-15582.679] (-15592.301) -- 0:08:21
Average standard deviation of split frequencies: 0.006749
851000 -- (-15583.760) (-15588.041) [-15575.278] (-15583.034) * (-15590.223) [-15574.645] (-15580.813) (-15589.428) -- 0:08:17
852000 -- (-15583.742) [-15575.427] (-15590.555) (-15587.623) * (-15595.916) [-15586.147] (-15593.809) (-15583.059) -- 0:08:14
853000 -- (-15589.830) [-15579.687] (-15585.760) (-15590.710) * (-15581.418) (-15588.274) [-15583.749] (-15587.020) -- 0:08:11
854000 -- [-15578.529] (-15590.492) (-15581.159) (-15583.931) * (-15588.259) (-15577.906) (-15591.230) [-15574.585] -- 0:08:07
855000 -- (-15580.365) (-15590.373) (-15589.309) [-15582.583] * (-15584.794) [-15580.687] (-15594.788) (-15579.642) -- 0:08:04
Average standard deviation of split frequencies: 0.006863
856000 -- [-15584.729] (-15581.460) (-15590.100) (-15608.243) * (-15588.577) [-15575.791] (-15592.611) (-15581.929) -- 0:08:01
857000 -- (-15592.177) [-15575.027] (-15590.287) (-15585.935) * (-15596.100) [-15578.129] (-15577.978) (-15589.009) -- 0:07:57
858000 -- (-15593.210) (-15591.229) [-15586.637] (-15587.801) * [-15583.865] (-15587.241) (-15588.346) (-15579.570) -- 0:07:54
859000 -- (-15603.393) [-15578.871] (-15583.116) (-15593.211) * (-15582.843) [-15588.872] (-15595.291) (-15583.657) -- 0:07:51
860000 -- [-15592.484] (-15594.913) (-15579.594) (-15588.711) * (-15592.282) (-15578.660) (-15598.923) [-15570.324] -- 0:07:47
Average standard deviation of split frequencies: 0.006671
861000 -- (-15608.500) (-15581.761) [-15574.059] (-15577.373) * [-15585.629] (-15572.129) (-15582.805) (-15575.795) -- 0:07:44
862000 -- (-15580.256) (-15578.546) [-15577.851] (-15591.044) * [-15581.442] (-15578.892) (-15591.566) (-15587.468) -- 0:07:41
863000 -- [-15578.940] (-15585.877) (-15576.141) (-15586.373) * (-15581.369) (-15592.236) [-15588.622] (-15594.409) -- 0:07:37
864000 -- (-15585.859) (-15582.911) [-15579.106] (-15589.797) * (-15583.596) (-15589.896) (-15586.381) [-15589.842] -- 0:07:34
865000 -- (-15587.088) [-15581.836] (-15594.794) (-15601.615) * (-15589.866) [-15583.307] (-15584.441) (-15597.976) -- 0:07:30
Average standard deviation of split frequencies: 0.006783
866000 -- (-15580.162) [-15585.051] (-15588.227) (-15587.393) * (-15587.906) (-15594.129) (-15583.174) [-15575.092] -- 0:07:27
867000 -- [-15571.081] (-15577.081) (-15602.170) (-15579.091) * [-15575.024] (-15592.380) (-15588.245) (-15585.369) -- 0:07:24
868000 -- (-15583.173) [-15582.833] (-15600.441) (-15589.339) * (-15587.403) (-15596.296) [-15577.787] (-15592.175) -- 0:07:20
869000 -- (-15602.619) [-15577.206] (-15588.740) (-15582.893) * (-15581.121) (-15591.108) [-15589.007] (-15575.774) -- 0:07:17
870000 -- (-15582.652) [-15576.490] (-15585.523) (-15583.820) * [-15572.516] (-15585.994) (-15590.044) (-15586.950) -- 0:07:14
Average standard deviation of split frequencies: 0.006761
871000 -- (-15590.389) (-15575.947) [-15589.184] (-15583.696) * [-15576.145] (-15586.278) (-15592.440) (-15580.169) -- 0:07:10
872000 -- (-15595.021) [-15573.140] (-15584.428) (-15596.718) * (-15596.877) [-15581.559] (-15585.986) (-15582.430) -- 0:07:07
873000 -- (-15580.932) [-15588.201] (-15577.809) (-15588.914) * (-15590.075) [-15586.434] (-15589.714) (-15586.457) -- 0:07:04
874000 -- (-15579.542) (-15583.138) [-15580.610] (-15590.860) * [-15583.372] (-15583.302) (-15585.244) (-15589.119) -- 0:07:00
875000 -- (-15580.865) (-15579.095) (-15597.075) [-15582.652] * (-15585.096) [-15575.160] (-15587.443) (-15587.785) -- 0:06:57
Average standard deviation of split frequencies: 0.006361
876000 -- (-15578.966) (-15590.632) [-15586.022] (-15585.134) * (-15584.299) (-15573.481) (-15589.200) [-15574.329] -- 0:06:54
877000 -- (-15594.009) [-15576.990] (-15588.013) (-15585.138) * (-15582.419) [-15590.378] (-15598.503) (-15580.302) -- 0:06:50
878000 -- (-15582.867) [-15582.512] (-15580.438) (-15589.098) * [-15583.201] (-15580.369) (-15588.683) (-15585.487) -- 0:06:47
879000 -- (-15589.477) (-15581.276) (-15585.305) [-15583.571] * (-15577.414) (-15580.059) (-15592.200) [-15580.130] -- 0:06:44
880000 -- (-15585.000) (-15590.177) (-15598.615) [-15573.610] * (-15578.223) (-15576.679) [-15577.891] (-15580.716) -- 0:06:40
Average standard deviation of split frequencies: 0.006259
881000 -- [-15574.709] (-15583.989) (-15584.766) (-15584.494) * (-15589.436) (-15580.713) (-15584.161) [-15580.916] -- 0:06:37
882000 -- (-15580.575) [-15580.134] (-15588.252) (-15593.767) * [-15584.870] (-15586.837) (-15582.455) (-15590.383) -- 0:06:34
883000 -- [-15576.276] (-15588.911) (-15591.086) (-15589.256) * [-15584.623] (-15588.129) (-15589.936) (-15581.712) -- 0:06:30
884000 -- (-15578.669) (-15586.963) (-15599.804) [-15587.735] * (-15587.498) (-15592.755) [-15575.475] (-15587.644) -- 0:06:27
885000 -- [-15566.907] (-15591.280) (-15591.113) (-15597.465) * (-15590.109) (-15598.825) (-15585.674) [-15592.478] -- 0:06:23
Average standard deviation of split frequencies: 0.006194
886000 -- (-15583.499) (-15583.248) (-15583.300) [-15588.339] * (-15597.791) [-15574.469] (-15595.718) (-15587.160) -- 0:06:20
887000 -- (-15590.418) (-15592.983) (-15595.310) [-15587.741] * (-15602.374) (-15586.179) [-15573.983] (-15589.207) -- 0:06:17
888000 -- (-15577.999) [-15586.413] (-15578.798) (-15600.919) * (-15605.986) [-15574.535] (-15581.687) (-15591.511) -- 0:06:13
889000 -- [-15586.836] (-15576.039) (-15580.239) (-15592.928) * (-15579.590) [-15587.828] (-15576.243) (-15589.133) -- 0:06:10
890000 -- (-15573.983) (-15594.918) (-15587.006) [-15584.063] * (-15588.779) [-15589.531] (-15580.879) (-15587.692) -- 0:06:07
Average standard deviation of split frequencies: 0.006324
891000 -- (-15574.608) (-15595.124) (-15594.347) [-15586.983] * (-15588.987) [-15579.050] (-15587.844) (-15587.266) -- 0:06:03
892000 -- (-15589.414) (-15576.180) (-15578.683) [-15574.516] * [-15578.187] (-15594.382) (-15582.789) (-15581.994) -- 0:06:00
893000 -- (-15586.141) [-15576.427] (-15585.865) (-15583.114) * (-15586.643) (-15591.754) [-15583.629] (-15588.528) -- 0:05:57
894000 -- (-15601.047) (-15587.322) (-15588.612) [-15580.992] * (-15575.677) (-15587.476) [-15576.665] (-15583.458) -- 0:05:53
895000 -- (-15588.628) (-15604.766) [-15588.747] (-15582.779) * [-15578.767] (-15583.996) (-15577.543) (-15589.341) -- 0:05:50
Average standard deviation of split frequencies: 0.006313
896000 -- (-15590.760) [-15589.080] (-15580.045) (-15582.959) * [-15576.236] (-15595.949) (-15581.156) (-15581.204) -- 0:05:47
897000 -- (-15590.508) [-15600.740] (-15581.537) (-15577.859) * (-15582.262) (-15585.400) (-15583.395) [-15584.457] -- 0:05:43
898000 -- (-15580.774) (-15582.456) [-15580.524] (-15584.593) * (-15593.210) (-15585.861) (-15585.054) [-15582.010] -- 0:05:40
899000 -- [-15579.525] (-15575.160) (-15575.287) (-15594.200) * [-15578.538] (-15580.202) (-15583.195) (-15588.892) -- 0:05:37
900000 -- (-15580.120) [-15584.014] (-15596.706) (-15582.894) * [-15583.908] (-15584.053) (-15581.775) (-15587.357) -- 0:05:34
Average standard deviation of split frequencies: 0.006321
901000 -- (-15594.368) [-15574.621] (-15594.761) (-15590.603) * (-15583.560) (-15585.296) [-15575.275] (-15598.501) -- 0:05:30
902000 -- [-15591.431] (-15578.984) (-15590.426) (-15582.383) * (-15593.637) [-15583.007] (-15580.428) (-15593.860) -- 0:05:27
903000 -- [-15583.718] (-15583.842) (-15589.627) (-15584.796) * (-15594.175) (-15585.759) [-15580.998] (-15582.071) -- 0:05:23
904000 -- (-15588.034) (-15580.459) (-15584.696) [-15588.007] * (-15586.348) (-15588.977) [-15587.924] (-15577.969) -- 0:05:20
905000 -- (-15584.284) (-15593.567) (-15586.437) [-15580.876] * (-15593.240) (-15582.137) (-15581.442) [-15582.120] -- 0:05:17
Average standard deviation of split frequencies: 0.006350
906000 -- (-15585.980) (-15603.664) [-15587.250] (-15581.149) * [-15577.200] (-15580.640) (-15590.071) (-15606.322) -- 0:05:13
907000 -- (-15590.565) (-15582.740) (-15582.108) [-15576.702] * (-15585.479) (-15587.979) (-15590.454) [-15583.241] -- 0:05:10
908000 -- (-15586.431) (-15587.723) [-15587.301] (-15592.885) * [-15576.808] (-15584.729) (-15584.874) (-15588.664) -- 0:05:07
909000 -- (-15590.175) [-15577.750] (-15598.358) (-15588.915) * [-15587.555] (-15585.258) (-15582.851) (-15579.375) -- 0:05:03
910000 -- (-15594.194) (-15579.427) (-15577.240) [-15586.758] * (-15586.584) (-15582.841) (-15583.337) [-15585.906] -- 0:05:00
Average standard deviation of split frequencies: 0.006371
911000 -- (-15591.687) (-15601.660) [-15575.755] (-15579.934) * (-15585.777) [-15577.534] (-15582.447) (-15584.481) -- 0:04:57
912000 -- (-15587.007) [-15582.741] (-15597.913) (-15589.197) * [-15592.392] (-15587.852) (-15582.699) (-15586.428) -- 0:04:53
913000 -- (-15574.202) [-15578.568] (-15591.194) (-15585.414) * [-15577.833] (-15583.505) (-15580.345) (-15590.650) -- 0:04:50
914000 -- [-15576.428] (-15586.582) (-15589.369) (-15580.218) * [-15586.659] (-15593.421) (-15584.733) (-15596.691) -- 0:04:47
915000 -- [-15580.966] (-15573.995) (-15579.693) (-15582.519) * (-15583.025) [-15572.699] (-15584.154) (-15594.877) -- 0:04:43
Average standard deviation of split frequencies: 0.006228
916000 -- (-15593.421) (-15594.949) [-15587.575] (-15583.635) * (-15573.638) [-15570.304] (-15590.257) (-15580.843) -- 0:04:40
917000 -- [-15582.228] (-15596.601) (-15586.454) (-15590.084) * [-15579.835] (-15585.527) (-15596.895) (-15605.331) -- 0:04:37
918000 -- (-15591.679) (-15593.819) (-15589.341) [-15568.808] * [-15583.411] (-15572.453) (-15591.434) (-15594.776) -- 0:04:33
919000 -- (-15597.777) (-15590.513) (-15576.340) [-15573.578] * (-15587.010) [-15578.089] (-15587.364) (-15587.749) -- 0:04:30
920000 -- [-15576.386] (-15591.649) (-15578.854) (-15583.380) * [-15571.967] (-15578.218) (-15598.110) (-15594.447) -- 0:04:27
Average standard deviation of split frequencies: 0.006171
921000 -- (-15577.417) [-15588.199] (-15585.533) (-15583.715) * (-15578.370) [-15583.185] (-15583.906) (-15579.422) -- 0:04:23
922000 -- (-15591.454) (-15602.621) [-15586.670] (-15582.076) * (-15586.744) (-15580.318) (-15592.978) [-15576.649] -- 0:04:20
923000 -- (-15589.683) (-15588.399) [-15589.130] (-15578.993) * (-15587.340) (-15603.501) (-15597.747) [-15578.846] -- 0:04:17
924000 -- (-15581.808) [-15592.366] (-15588.245) (-15588.853) * [-15583.760] (-15588.298) (-15590.384) (-15588.333) -- 0:04:13
925000 -- [-15576.865] (-15586.817) (-15583.983) (-15589.423) * (-15582.529) (-15578.523) (-15590.004) [-15588.294] -- 0:04:10
Average standard deviation of split frequencies: 0.006148
926000 -- (-15583.033) [-15574.711] (-15594.021) (-15581.198) * (-15580.082) (-15577.085) (-15575.800) [-15584.231] -- 0:04:07
927000 -- (-15576.318) (-15570.917) [-15581.360] (-15588.501) * (-15603.604) (-15586.701) [-15576.643] (-15584.921) -- 0:04:03
928000 -- (-15582.831) [-15585.279] (-15574.950) (-15590.346) * (-15584.199) (-15597.105) [-15583.297] (-15584.524) -- 0:04:00
929000 -- [-15581.453] (-15602.036) (-15584.540) (-15580.185) * (-15583.848) [-15580.349] (-15582.008) (-15588.074) -- 0:03:57
930000 -- (-15581.104) (-15595.996) (-15580.173) [-15572.627] * [-15576.114] (-15577.537) (-15591.466) (-15587.072) -- 0:03:53
Average standard deviation of split frequencies: 0.006182
931000 -- (-15587.520) (-15603.877) [-15588.416] (-15588.200) * (-15582.465) (-15588.302) [-15582.951] (-15574.411) -- 0:03:50
932000 -- (-15602.232) (-15584.845) [-15582.669] (-15594.960) * (-15584.224) (-15591.255) (-15584.698) [-15577.451] -- 0:03:47
933000 -- (-15598.611) [-15587.097] (-15591.946) (-15590.963) * (-15577.464) [-15588.731] (-15587.106) (-15587.664) -- 0:03:43
934000 -- (-15583.439) (-15584.050) [-15580.606] (-15590.226) * (-15605.327) (-15581.142) [-15584.418] (-15591.542) -- 0:03:40
935000 -- (-15579.048) (-15593.933) [-15585.820] (-15586.645) * (-15601.283) [-15581.179] (-15592.124) (-15578.122) -- 0:03:37
Average standard deviation of split frequencies: 0.006082
936000 -- (-15597.442) (-15578.138) (-15594.591) [-15576.953] * (-15610.526) [-15587.138] (-15577.097) (-15583.690) -- 0:03:33
937000 -- (-15580.072) (-15597.428) [-15578.341] (-15589.771) * (-15588.837) (-15578.855) (-15580.363) [-15583.496] -- 0:03:30
938000 -- (-15582.166) (-15583.725) [-15590.265] (-15596.365) * (-15592.646) (-15595.724) (-15581.800) [-15579.105] -- 0:03:27
939000 -- [-15580.247] (-15581.348) (-15588.918) (-15580.427) * (-15600.729) (-15580.375) [-15580.720] (-15586.273) -- 0:03:23
940000 -- (-15578.519) (-15600.391) (-15591.009) [-15579.058] * (-15592.886) (-15583.784) [-15583.386] (-15579.607) -- 0:03:20
Average standard deviation of split frequencies: 0.006155
941000 -- (-15578.393) [-15582.102] (-15591.082) (-15585.409) * (-15588.715) [-15584.314] (-15594.121) (-15585.993) -- 0:03:17
942000 -- [-15582.791] (-15584.514) (-15590.280) (-15588.391) * (-15575.965) (-15584.047) (-15597.917) [-15580.929] -- 0:03:13
943000 -- (-15573.103) [-15583.809] (-15612.623) (-15599.536) * (-15583.013) (-15592.737) (-15594.700) [-15578.502] -- 0:03:10
944000 -- (-15604.389) [-15577.424] (-15591.159) (-15582.464) * [-15579.557] (-15590.296) (-15589.176) (-15590.287) -- 0:03:07
945000 -- (-15578.936) (-15582.999) (-15587.518) [-15586.956] * [-15582.128] (-15579.290) (-15584.919) (-15594.644) -- 0:03:03
Average standard deviation of split frequencies: 0.006171
946000 -- (-15598.462) (-15586.172) (-15589.622) [-15586.479] * (-15575.243) (-15581.690) [-15581.934] (-15590.951) -- 0:03:00
947000 -- (-15581.747) (-15577.871) (-15597.485) [-15572.359] * (-15583.629) [-15579.551] (-15588.261) (-15607.408) -- 0:02:57
948000 -- (-15584.401) (-15586.470) [-15588.201] (-15592.699) * [-15578.958] (-15586.419) (-15582.800) (-15603.429) -- 0:02:53
949000 -- (-15596.971) (-15596.886) [-15583.622] (-15581.513) * [-15594.482] (-15590.436) (-15584.292) (-15587.236) -- 0:02:50
950000 -- (-15587.732) (-15585.085) (-15590.029) [-15574.389] * (-15587.426) [-15573.443] (-15587.088) (-15593.666) -- 0:02:47
Average standard deviation of split frequencies: 0.006383
951000 -- [-15583.147] (-15585.922) (-15597.592) (-15586.647) * [-15580.994] (-15575.758) (-15589.151) (-15582.661) -- 0:02:43
952000 -- [-15600.153] (-15584.286) (-15594.358) (-15597.267) * (-15588.531) [-15577.428] (-15595.639) (-15590.411) -- 0:02:40
953000 -- (-15583.346) (-15581.556) [-15583.192] (-15604.067) * (-15584.743) [-15574.996] (-15580.310) (-15582.730) -- 0:02:37
954000 -- (-15581.022) (-15592.408) (-15581.077) [-15590.723] * (-15588.451) (-15585.182) [-15587.326] (-15586.820) -- 0:02:33
955000 -- (-15583.787) (-15581.703) [-15580.825] (-15580.248) * (-15587.516) (-15585.097) (-15586.870) [-15579.040] -- 0:02:30
Average standard deviation of split frequencies: 0.006233
956000 -- [-15586.773] (-15595.933) (-15583.222) (-15583.132) * (-15579.580) [-15582.377] (-15593.406) (-15584.191) -- 0:02:27
957000 -- (-15584.071) [-15577.852] (-15591.442) (-15576.541) * (-15588.339) (-15586.683) [-15586.742] (-15579.787) -- 0:02:23
958000 -- (-15595.552) [-15576.883] (-15589.317) (-15579.528) * (-15590.103) (-15577.324) (-15590.308) [-15582.412] -- 0:02:20
959000 -- (-15587.730) (-15584.807) (-15584.823) [-15580.360] * (-15579.328) (-15582.706) (-15592.692) [-15580.395] -- 0:02:16
960000 -- (-15593.517) [-15570.416] (-15605.824) (-15575.522) * (-15590.585) (-15582.470) (-15575.876) [-15567.743] -- 0:02:13
Average standard deviation of split frequencies: 0.006430
961000 -- [-15583.082] (-15584.683) (-15586.321) (-15592.488) * (-15575.116) (-15606.130) [-15582.261] (-15585.046) -- 0:02:10
962000 -- [-15581.385] (-15596.573) (-15584.508) (-15581.610) * (-15590.559) (-15590.793) [-15585.862] (-15586.494) -- 0:02:06
963000 -- (-15587.321) [-15582.461] (-15592.564) (-15585.114) * (-15579.628) (-15579.649) [-15576.835] (-15580.032) -- 0:02:03
964000 -- (-15586.873) (-15577.507) [-15578.358] (-15584.695) * (-15577.112) (-15574.690) [-15578.769] (-15584.404) -- 0:02:00
965000 -- (-15581.332) (-15577.373) (-15579.456) [-15581.382] * (-15588.831) (-15578.813) [-15575.767] (-15592.491) -- 0:01:56
Average standard deviation of split frequencies: 0.006444
966000 -- (-15585.554) [-15579.607] (-15588.929) (-15613.090) * (-15586.993) (-15589.579) (-15590.412) [-15584.157] -- 0:01:53
967000 -- (-15589.782) (-15581.636) (-15586.886) [-15576.563] * [-15578.066] (-15586.255) (-15582.079) (-15581.361) -- 0:01:50
968000 -- [-15580.227] (-15581.857) (-15591.112) (-15586.736) * (-15589.987) (-15596.014) (-15576.996) [-15585.965] -- 0:01:46
969000 -- (-15593.151) [-15577.445] (-15597.192) (-15590.099) * (-15581.185) (-15578.104) [-15579.083] (-15587.947) -- 0:01:43
970000 -- (-15578.037) [-15573.713] (-15589.890) (-15585.208) * [-15573.730] (-15578.171) (-15591.609) (-15581.961) -- 0:01:40
Average standard deviation of split frequencies: 0.006625
971000 -- (-15581.950) [-15571.069] (-15592.021) (-15580.844) * (-15581.502) (-15584.365) (-15584.758) [-15580.693] -- 0:01:36
972000 -- (-15599.880) [-15584.333] (-15584.079) (-15583.034) * (-15603.838) (-15601.217) (-15582.367) [-15580.834] -- 0:01:33
973000 -- (-15585.607) [-15580.175] (-15577.884) (-15579.075) * (-15585.823) (-15590.243) (-15589.218) [-15581.473] -- 0:01:30
974000 -- (-15587.699) (-15585.667) (-15582.286) [-15573.414] * (-15580.770) [-15583.970] (-15578.650) (-15588.490) -- 0:01:26
975000 -- [-15582.741] (-15588.095) (-15578.978) (-15584.604) * (-15576.327) (-15583.748) [-15577.981] (-15585.472) -- 0:01:23
Average standard deviation of split frequencies: 0.006650
976000 -- (-15592.856) (-15593.365) [-15578.605] (-15586.462) * [-15571.319] (-15587.987) (-15586.584) (-15581.489) -- 0:01:20
977000 -- (-15581.568) (-15593.741) (-15586.899) [-15583.463] * (-15575.657) [-15585.397] (-15579.813) (-15592.587) -- 0:01:16
978000 -- [-15585.777] (-15585.091) (-15588.270) (-15592.583) * (-15590.266) (-15586.114) [-15576.871] (-15596.370) -- 0:01:13
979000 -- (-15579.796) (-15584.371) [-15580.550] (-15596.029) * (-15579.839) (-15583.702) (-15593.711) [-15587.837] -- 0:01:10
980000 -- (-15586.246) [-15576.851] (-15590.717) (-15596.130) * (-15574.963) (-15579.394) [-15583.214] (-15579.994) -- 0:01:06
Average standard deviation of split frequencies: 0.006607
981000 -- (-15574.418) (-15592.120) [-15582.483] (-15592.347) * [-15585.486] (-15581.626) (-15588.077) (-15600.810) -- 0:01:03
982000 -- (-15581.910) (-15595.410) (-15577.114) [-15583.966] * [-15582.534] (-15591.194) (-15586.579) (-15589.897) -- 0:01:00
983000 -- (-15576.250) (-15609.278) [-15579.756] (-15583.236) * (-15582.050) [-15574.248] (-15594.526) (-15593.403) -- 0:00:56
984000 -- (-15580.602) (-15590.826) (-15585.684) [-15574.578] * [-15590.654] (-15584.902) (-15581.210) (-15584.985) -- 0:00:53
985000 -- (-15589.487) (-15576.821) (-15585.425) [-15567.790] * [-15587.618] (-15583.869) (-15590.497) (-15607.651) -- 0:00:50
Average standard deviation of split frequencies: 0.006399
986000 -- (-15593.788) [-15581.972] (-15579.077) (-15585.461) * (-15594.107) (-15581.941) (-15583.961) [-15578.385] -- 0:00:46
987000 -- (-15578.966) (-15591.107) [-15576.304] (-15581.049) * (-15591.274) [-15582.405] (-15591.671) (-15585.542) -- 0:00:43
988000 -- (-15575.875) (-15586.156) [-15582.393] (-15584.451) * [-15585.775] (-15578.031) (-15600.147) (-15605.325) -- 0:00:40
989000 -- (-15582.524) (-15595.708) (-15585.796) [-15588.483] * (-15587.473) (-15580.197) [-15589.748] (-15605.910) -- 0:00:36
990000 -- (-15586.564) (-15579.967) (-15581.976) [-15587.165] * (-15585.428) (-15583.895) (-15590.352) [-15589.389] -- 0:00:33
Average standard deviation of split frequencies: 0.006430
991000 -- [-15583.302] (-15588.402) (-15596.374) (-15588.739) * (-15598.493) [-15586.162] (-15581.371) (-15582.811) -- 0:00:30
992000 -- [-15583.550] (-15596.855) (-15584.186) (-15585.188) * (-15593.904) (-15594.735) (-15575.521) [-15576.343] -- 0:00:26
993000 -- (-15604.368) [-15594.485] (-15589.732) (-15574.095) * [-15586.383] (-15599.930) (-15590.108) (-15577.924) -- 0:00:23
994000 -- (-15584.637) [-15581.405] (-15594.790) (-15605.343) * (-15584.132) (-15600.541) [-15590.999] (-15592.450) -- 0:00:20
995000 -- [-15578.875] (-15575.985) (-15595.518) (-15587.557) * (-15591.977) (-15600.073) [-15582.528] (-15596.302) -- 0:00:16
Average standard deviation of split frequencies: 0.006408
996000 -- [-15577.550] (-15587.096) (-15575.044) (-15594.303) * [-15579.571] (-15600.452) (-15584.935) (-15588.432) -- 0:00:13
997000 -- [-15581.978] (-15576.320) (-15594.699) (-15584.856) * [-15577.026] (-15584.166) (-15588.997) (-15592.973) -- 0:00:10
998000 -- (-15580.969) (-15578.051) (-15594.868) [-15570.130] * [-15573.509] (-15585.485) (-15582.626) (-15590.517) -- 0:00:06
999000 -- (-15590.335) [-15579.702] (-15576.670) (-15602.619) * (-15586.189) (-15586.639) [-15578.190] (-15590.935) -- 0:00:03
1000000 -- (-15594.047) (-15583.530) (-15584.477) [-15584.281] * (-15576.143) [-15576.907] (-15599.999) (-15578.516) -- 0:00:00
Average standard deviation of split frequencies: 0.006088
Analysis completed in 55 mins 42 seconds
Analysis used 3338.14 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -15563.18
Likelihood of best state for "cold" chain of run 2 was -15563.56
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
21.5 % ( 24 %) Dirichlet(Revmat{all})
33.0 % ( 20 %) Slider(Revmat{all})
7.5 % ( 7 %) Dirichlet(Pi{all})
20.3 % ( 23 %) Slider(Pi{all})
25.2 % ( 24 %) Multiplier(Alpha{1,2})
40.7 % ( 31 %) Multiplier(Alpha{3})
31.8 % ( 22 %) Slider(Pinvar{all})
39.6 % ( 42 %) ExtSPR(Tau{all},V{all})
30.9 % ( 28 %) ExtTBR(Tau{all},V{all})
42.6 % ( 43 %) NNI(Tau{all},V{all})
32.4 % ( 38 %) ParsSPR(Tau{all},V{all})
26.5 % ( 32 %) Multiplier(V{all})
41.8 % ( 47 %) Nodeslider(V{all})
23.1 % ( 21 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
21.8 % ( 24 %) Dirichlet(Revmat{all})
33.8 % ( 31 %) Slider(Revmat{all})
7.2 % ( 11 %) Dirichlet(Pi{all})
20.5 % ( 21 %) Slider(Pi{all})
25.4 % ( 27 %) Multiplier(Alpha{1,2})
40.7 % ( 32 %) Multiplier(Alpha{3})
31.6 % ( 20 %) Slider(Pinvar{all})
39.3 % ( 41 %) ExtSPR(Tau{all},V{all})
31.3 % ( 26 %) ExtTBR(Tau{all},V{all})
42.4 % ( 47 %) NNI(Tau{all},V{all})
32.9 % ( 34 %) ParsSPR(Tau{all},V{all})
26.5 % ( 29 %) Multiplier(V{all})
41.8 % ( 46 %) Nodeslider(V{all})
23.0 % ( 22 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.71 0.48 0.30
2 | 166317 0.73 0.51
3 | 167201 166308 0.75
4 | 166502 166570 167102
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.71 0.48 0.31
2 | 166653 0.73 0.52
3 | 166679 166911 0.75
4 | 165894 167333 166530
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -15577.27
| 1 1 |
| |
| 2 |
| 2 1 1 2 1 2 1 22 1 |
| 1 2 2 11 2 2 1 2 2 21 |
|*2 1 12 2 2* 2 1 1 2 2 1 1 |
| 2111 1 2 2 2 2 1 1 222 1 2 |
| 1 2 2 1 2 1 1 1 21 *122 12 12* |
| 2 2 * 2 * 2 1 * 1 1**122 |
| 2 1 1 1 * 1 2 * *|
| 1 2 1 1 1 |
| 1 2 |
| 2 |
| |
| 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -15585.21
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -15571.91 -15597.01
2 -15569.43 -15595.49
--------------------------------------
TOTAL -15570.04 -15596.51
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.090407 0.001836 1.004872 1.172282 1.090461 1335.63 1341.43 1.000
r(A<->C){all} 0.103481 0.000094 0.085229 0.123285 0.103172 957.48 1050.20 1.000
r(A<->G){all} 0.242620 0.000200 0.214471 0.268991 0.242987 677.72 794.34 1.000
r(A<->T){all} 0.097951 0.000055 0.084415 0.113077 0.097684 956.38 1035.18 1.000
r(C<->G){all} 0.097858 0.000113 0.078834 0.119512 0.097315 903.09 926.28 1.000
r(C<->T){all} 0.382962 0.000256 0.351593 0.413772 0.383019 790.21 831.37 1.000
r(G<->T){all} 0.075128 0.000050 0.061894 0.089697 0.075178 899.57 984.62 1.000
pi(A){all} 0.270040 0.000038 0.258126 0.282197 0.270061 880.07 1073.60 1.001
pi(C){all} 0.188425 0.000027 0.177959 0.198131 0.188366 876.87 977.31 1.000
pi(G){all} 0.211823 0.000034 0.200242 0.223114 0.211645 1051.77 1055.62 1.000
pi(T){all} 0.329712 0.000044 0.317453 0.343355 0.329682 646.92 777.75 1.000
alpha{1,2} 0.235920 0.000299 0.205153 0.271834 0.234740 1356.27 1359.72 1.000
alpha{3} 7.199994 3.623343 4.038282 11.243170 6.954937 1248.13 1277.51 1.001
pinvar{all} 0.293777 0.000547 0.249660 0.339026 0.294311 1170.08 1233.37 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C11
4 -- C12
5 -- C13
6 -- C14
7 -- C15
8 -- C16
9 -- C17
10 -- C2
11 -- C3
12 -- C4
13 -- C5
14 -- C6
15 -- C7
16 -- C8
17 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
-----------------------
1 -- .****************
2 -- .*...............
3 -- ..*..............
4 -- ...*.............
5 -- ....*............
6 -- .....*...........
7 -- ......*..........
8 -- .......*.........
9 -- ........*........
10 -- .........*.......
11 -- ..........*......
12 -- ...........*.....
13 -- ............*....
14 -- .............*...
15 -- ..............*..
16 -- ...............*.
17 -- ................*
18 -- .*...*****..*****
19 -- .....*****...****
20 -- .**.******.******
21 -- .*..******..*****
22 -- .*..........*....
23 -- ..*........*.....
24 -- .**.*************
25 -- .....**.*....***.
26 -- .......*.*......*
27 -- .......*........*
28 -- .........*......*
29 -- .......*.*.......
30 -- .....*****...***.
31 -- .....**.**...***.
32 -- .....****....***.
33 -- .....**.**...****
34 -- .....****....****
35 -- .....**.*....****
36 -- .....**..........
37 -- ........*.....*..
38 -- ........*......*.
39 -- ..............**.
40 -- .............*.*.
41 -- ........*....*...
42 -- .....*........*..
43 -- ......*......*...
44 -- .....**.*.....**.
45 -- ......*.*....***.
46 -- .....*.........*.
47 -- .............**..
48 -- .....*..*........
49 -- .....*..*....***.
50 -- ......*.......*..
51 -- .....*.......*...
52 -- ......*.*........
53 -- .....**.*....*.*.
54 -- .....**.*....**..
55 -- .....**......***.
56 -- ......*........*.
-----------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
18 3002 1.000000 0.000000 1.000000 1.000000 2
19 3002 1.000000 0.000000 1.000000 1.000000 2
20 3002 1.000000 0.000000 1.000000 1.000000 2
21 3002 1.000000 0.000000 1.000000 1.000000 2
22 3002 1.000000 0.000000 1.000000 1.000000 2
23 3002 1.000000 0.000000 1.000000 1.000000 2
24 3002 1.000000 0.000000 1.000000 1.000000 2
25 2826 0.941372 0.013191 0.932045 0.950700 2
26 858 0.285809 0.016017 0.274484 0.297135 2
27 675 0.224850 0.015546 0.213857 0.235843 2
28 640 0.213191 0.008480 0.207195 0.219187 2
29 606 0.201865 0.011306 0.193871 0.209860 2
30 573 0.190873 0.022141 0.175217 0.206529 2
31 564 0.187875 0.024497 0.170553 0.205197 2
32 546 0.181879 0.001884 0.180546 0.183211 2
33 531 0.176882 0.002355 0.175217 0.178548 2
34 513 0.170886 0.003298 0.168554 0.173218 2
35 498 0.165889 0.000942 0.165223 0.166556 2
36 358 0.119254 0.005653 0.115256 0.123251 2
37 355 0.118254 0.001413 0.117255 0.119254 2
38 354 0.117921 0.005653 0.113924 0.121919 2
39 350 0.116589 0.001884 0.115256 0.117921 2
40 344 0.114590 0.006595 0.109927 0.119254 2
41 341 0.113591 0.007066 0.108594 0.118588 2
42 340 0.113258 0.006595 0.108594 0.117921 2
43 336 0.111925 0.001884 0.110593 0.113258 2
44 333 0.110926 0.001413 0.109927 0.111925 2
45 331 0.110260 0.007066 0.105263 0.115256 2
46 326 0.108594 0.012248 0.099933 0.117255 2
47 320 0.106596 0.010364 0.099267 0.113924 2
48 319 0.106262 0.005182 0.102598 0.109927 2
49 316 0.105263 0.001884 0.103931 0.106596 2
50 314 0.104597 0.008480 0.098601 0.110593 2
51 312 0.103931 0.004711 0.100600 0.107262 2
52 310 0.103264 0.001884 0.101932 0.104597 2
53 308 0.102598 0.000942 0.101932 0.103264 2
54 303 0.100933 0.001413 0.099933 0.101932 2
55 299 0.099600 0.008951 0.093271 0.105929 2
56 299 0.099600 0.016488 0.087941 0.111259 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.010779 0.000005 0.006677 0.015696 0.010692 1.000 2
length{all}[2] 0.070773 0.000057 0.056262 0.085925 0.070451 1.002 2
length{all}[3] 0.000635 0.000000 0.000020 0.001515 0.000530 1.000 2
length{all}[4] 0.013565 0.000006 0.009165 0.018916 0.013438 1.000 2
length{all}[5] 0.000738 0.000001 0.000000 0.002246 0.000519 1.000 2
length{all}[6] 0.000345 0.000000 0.000000 0.001006 0.000243 1.000 2
length{all}[7] 0.002068 0.000001 0.000667 0.003762 0.001979 1.000 2
length{all}[8] 0.000338 0.000000 0.000000 0.000988 0.000240 1.000 2
length{all}[9] 0.000347 0.000000 0.000000 0.001023 0.000244 1.000 2
length{all}[10] 0.000339 0.000000 0.000000 0.000984 0.000240 1.001 2
length{all}[11] 0.207400 0.000217 0.180713 0.236528 0.206549 1.000 2
length{all}[12] 0.000332 0.000000 0.000000 0.001024 0.000229 1.002 2
length{all}[13] 0.057443 0.000048 0.043560 0.070576 0.057147 1.000 2
length{all}[14] 0.000348 0.000000 0.000000 0.001052 0.000242 1.001 2
length{all}[15] 0.000682 0.000000 0.000003 0.001668 0.000566 1.000 2
length{all}[16] 0.000349 0.000000 0.000000 0.001068 0.000242 1.000 2
length{all}[17] 0.000346 0.000000 0.000000 0.001014 0.000237 1.000 2
length{all}[18] 0.103150 0.000075 0.086548 0.120149 0.102896 1.001 2
length{all}[19] 0.022885 0.000022 0.014564 0.032687 0.022666 1.000 2
length{all}[20] 0.051285 0.000062 0.035507 0.066946 0.051027 1.000 2
length{all}[21] 0.243439 0.000278 0.211282 0.275110 0.242634 1.000 2
length{all}[22] 0.192416 0.000196 0.164531 0.218879 0.191979 1.000 2
length{all}[23] 0.027576 0.000032 0.017111 0.038635 0.027331 1.000 2
length{all}[24] 0.079724 0.000067 0.064614 0.095569 0.079583 1.000 2
length{all}[25] 0.001014 0.000000 0.000124 0.002264 0.000898 1.000 2
length{all}[26] 0.000538 0.000000 0.000002 0.001587 0.000406 0.999 2
length{all}[27] 0.000326 0.000000 0.000000 0.000968 0.000230 1.001 2
length{all}[28] 0.000354 0.000000 0.000000 0.001020 0.000249 1.002 2
length{all}[29] 0.000362 0.000000 0.000002 0.001084 0.000255 0.999 2
length{all}[30] 0.000335 0.000000 0.000000 0.000924 0.000242 0.999 2
length{all}[31] 0.000356 0.000000 0.000001 0.001066 0.000246 1.000 2
length{all}[32] 0.000348 0.000000 0.000000 0.000962 0.000263 0.999 2
length{all}[33] 0.000374 0.000000 0.000000 0.001070 0.000256 0.999 2
length{all}[34] 0.000346 0.000000 0.000001 0.001099 0.000223 0.998 2
length{all}[35] 0.000348 0.000000 0.000001 0.001036 0.000238 1.001 2
length{all}[36] 0.000350 0.000000 0.000001 0.000980 0.000238 1.015 2
length{all}[37] 0.000333 0.000000 0.000001 0.000931 0.000219 1.010 2
length{all}[38] 0.000344 0.000000 0.000002 0.000993 0.000233 0.998 2
length{all}[39] 0.000343 0.000000 0.000002 0.001043 0.000240 0.997 2
length{all}[40] 0.000357 0.000000 0.000000 0.001058 0.000255 0.998 2
length{all}[41] 0.000353 0.000000 0.000000 0.000992 0.000245 0.997 2
length{all}[42] 0.000368 0.000000 0.000003 0.001044 0.000270 0.999 2
length{all}[43] 0.000317 0.000000 0.000001 0.000909 0.000217 0.998 2
length{all}[44] 0.000318 0.000000 0.000000 0.001013 0.000226 0.997 2
length{all}[45] 0.000347 0.000000 0.000004 0.001166 0.000235 1.003 2
length{all}[46] 0.000312 0.000000 0.000000 0.000959 0.000222 1.000 2
length{all}[47] 0.000315 0.000000 0.000000 0.000965 0.000233 1.000 2
length{all}[48] 0.000351 0.000000 0.000004 0.001099 0.000246 1.001 2
length{all}[49] 0.000368 0.000000 0.000001 0.001062 0.000273 0.997 2
length{all}[50] 0.000331 0.000000 0.000002 0.000864 0.000250 1.000 2
length{all}[51] 0.000350 0.000000 0.000003 0.001051 0.000229 0.997 2
length{all}[52] 0.000338 0.000000 0.000000 0.001030 0.000221 1.001 2
length{all}[53] 0.000334 0.000000 0.000001 0.000914 0.000248 0.998 2
length{all}[54] 0.000364 0.000000 0.000001 0.001087 0.000243 1.003 2
length{all}[55] 0.000330 0.000000 0.000002 0.000915 0.000219 0.997 2
length{all}[56] 0.000332 0.000000 0.000002 0.000935 0.000247 0.999 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.006088
Maximum standard deviation of split frequencies = 0.024497
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.015
Clade credibility values:
/----------------------------------------------------------------------- C1 (1)
|
|----------------------------------------------------------------------- C12 (4)
|
| /---------- C10 (2)
| /--------100--------+
| | \---------- C5 (13)
| |
| | /---------- C14 (6)
| | |
| | |---------- C15 (7)
| | |
| /----100---+ |---------- C17 (9)
| | | /----94---+
+ | | | |---------- C6 (14)
| | | | |
| | | | |---------- C7 (15)
| | | | |
| | | | \---------- C8 (16)
| /---100---+ \---100---+
| | | |-------------------- C16 (8)
| | | |
| | | |-------------------- C2 (10)
| | | |
| /---100---+ | \-------------------- C9 (17)
| | | |
| | | \----------------------------------------- C13 (5)
| | |
\---100---+ | /---------- C11 (3)
| \-------------------100------------------+
| \---------- C4 (12)
|
\------------------------------------------------------------- C3 (11)
Phylogram (based on average branch lengths):
/- C1 (1)
|
|- C12 (4)
|
| /------- C10 (2)
| /-----------------+
| | \------ C5 (13)
| |
| | / C14 (6)
| | |
| | | C15 (7)
| | |
| /---------+ | C17 (9)
| | | |
+ | | | C6 (14)
| | | |
| | | | C7 (15)
| | | |
| | | | C8 (16)
| /----------------------+ \-+
| | | | C16 (8)
| | | |
| | | | C2 (10)
| | | |
| /----+ | \ C9 (17)
| | | |
| | | \ C13 (5)
| | |
\-------+ | / C11 (3)
| \-+
| \ C4 (12)
|
\-------------------- C3 (11)
|--------| 0.100 expected changes per site
Calculating tree probabilities...
Credible sets of trees (2726 trees sampled):
50 % credible set contains 1225 trees
90 % credible set contains 2426 trees
95 % credible set contains 2576 trees
99 % credible set contains 2696 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
Running FUBAR...
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\
***************** TYPES OF STANDARD ANALYSES *****************
(1) Selection Analyses
(2) Evolutionary Hypothesis Testing
(3) Relative evolutionary rate inference
(4) Coevolutionary analysis
(5) Basic Analyses
(6) Codon Selection Analyses
(7) Compartmentalization
(8) Data File Tools
(9) Miscellaneous
(10) Model Comparison
(11) Kernel Analysis Tools
(12) Molecular Clock
(13) Phylogeny Reconstruction
(14) Positive Selection
(15) Recombination
(16) Selection/Recombination
(17) Relative Rate
(18) Relative Ratio
(19) Substitution Rates
Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' *****************
(1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution).
(2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood).
(3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting).
(4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection).
(5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification).
(6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood).
(7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation).
Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types):
Analysis Description
--------------------
Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a
coding sequence alignment to determine whether some sites have been
subject to pervasive purifying or diversifying selection. v2.1
introduces two more methods for estimating the posterior distribution of
grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation
Bayes approximation (fastest). Please note that a FUBAR analysis
generates a cache and a results JSON file in the same directory as
directory as the original alignment. HyPhy needs to have write
privileges to this directory. For example if the original file is in
/home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there
will also exist FUBAR-generated files
/home/sergei/FUBAR/data/pol.nex.FUBAR.json,
/home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide
checkpointing so that a partially completed analysis can be restarted.
- __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree
(one per partition)
- __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring
selection (2013), Mol Biol Evol. 30(5):1196-205
- __Written by__: Sergei L Kosakovsky Pond
- __Contact Information__: spond@temple.edu
- __Analysis Version__: 2.1
####Choose Genetic Code
1. [**Universal**] Universal code. (Genebank transl_table=1).
2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2).
3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3).
4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4).
5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5).
6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6).
7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9).
8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10).
9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12).
10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13).
11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14).
12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15).
13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16).
14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21).
15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22).
16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23).
17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24).
18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25).
19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26).
>Please choose an option (or press q to cancel selection):
>Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`)
>A tree was found in the data file: `(C1,C12,(((((C10,C5),((C14,C15,C17,C6,C7,C8),C16,C2,C9)),C13),(C11,C4)),C3))`
>Would you like to use it (y/n)?
>Loaded a multiple sequence alignment with **17** sequences, **1378** codons, and **1** partitions from `/data//pss_subsets/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/results/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1.fna`
> FUBAR will write cache and result files to _/data//pss_subsets/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/results/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/results/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1.fna.FUBAR.json_, respectively
> Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer):
####Posterior estimation method
1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation)
2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed)
3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default)
>Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5):
### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model
* Log(L) = -16304.70, AIC-c = 32675.44 (33 estimated parameters)
* Tree length (expected substitutions/site) for partition 1 : 0.611
### Computing the phylogenetic likelihood function on the grid
* Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid
* Best scaling achieved for
* synonymous rate = 2.815
* non-synonymous rate = 0.429
* Computing conditional site likelihoods on a 20 x 20 rate grid
### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights
* Using the following settings
* Dirichlet alpha : 0.5
### Tabulating site-level results
| Codon | Partition | alpha | beta |Posterior prob for positive selection|
|:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:|
| 118 | 1 | 1.777 | 15.296 | Pos. posterior = 0.9090 |
| 514 | 1 | 1.602 | 12.638 | Pos. posterior = 0.9119 |
| 518 | 1 | 4.160 | 28.305 | Pos. posterior = 0.9154 |
----
## FUBAR inferred 3 sites subject to diversifying positive selection at posterior probability >= 0.9
Of these, 0.26 are expected to be false positives (95% confidence interval of 0-1 )
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.13 sec, SCORE=1000, Nseq=17, Len=1378
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus MLFV-FLTLLPSCLGYIGDFRCINRVNTSISNARAPCVSTEVVDVSKGLG
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus MLFVVFILLIPSCLGYIGDFRCIQLVNSNGNNASAPSISIETVDVSKGLG
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus MLFV-FLTLLPSSLGYIGDFRCIQLVNTDTSNASAPSVSTEVVDVSKGIG
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus MLFV-FLLLLPSCLGYIGDFRCINLVNTDMSNASAPSVSTETVDVSKGLG
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 MLFVVFILLLPSCLGYIGDFRCIQTVNSNGNNASAPSISTEVVDVSKGLG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 MLFV-FLTLLPSSLGYIGDFRCIQLVNTDTSNASAPSVSTEVVDVSKGIG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 MLFV-FLTLLPSCLGYIGDFRCINRVNTSISNARAPSVSTEVVDVSKGLG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 MLFV-FILLLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG
**** *: ::**.**********: **:. *. **.:* *.*:**:*:*
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALMGTNTLSLNWFEPPFLSE
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus TYYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLNWYKPPFLSE
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALTGINTISLNWYKPPFLSE
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus TYYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTISLTWFKPPFLSE
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 TYYVLDRVYLNATLLLTGYYPVDGSSYRNLALTGTNTVSLAWFKPPFLSE
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALTGINTISLNWYKPPFLSE
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 TYYVLDRVYLNATLLLTGYYPVHGSMYRNMALMGTNTLSLNWFEPPFLSE
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 TYYVLDRVYLNATLLLTGYYPVDGSKFRNFALTGTNSVSLSWFQPPYLSQ
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ
**********************.** :**:** * *::** *::**:**:
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus FNDGIYAKVKNLKASLPIGSASYFPTIIIGSNFVNTSYTVVLEPYNGIIM
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus FNDGIFAKVKNLKASLPAGSSAYFPTIIIGSGFGNTAYTIVMEPYNGIIM
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus FNDGIFAKVKNLKASLPKDSISYFPTIIIGSNFVTTSYTVVLEPYNGIIM
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus FNDGIFAKVKNLKANTPKGATSYFPTIVIGSLFGHTSYTVVLEPYNNIIM
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 FNDGIFAKVKNLKANTPNGAISFFPTIVMGSLFGNTSYTVVLEPYNNIIM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 FNDGIFAKVKNLKASLPKDSISYFPTIIIGSNFVTTSYTVVLEPYNGIIM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 FNDGIYAKVKNLKASLPIGSASYFPTIIIGSNFVNTSYTVVLEPYNGIIM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM
*****:***:***:. * .: ::****::** * *:**:*:****.:**
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus ASICQYTICQLPHTDCKPNTGGNTLIGFWHTDLRAPVCILKRNFTFNVNA
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus ASICQYTICQLPYTDCKPNTGGNSIIGFWHTDIKSPVCILKRNFTFNVNA
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus ASICQYTICQLPYTDCKPNTGGNKLIGFWHTELKSPVCILKRNFTFNVNA
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus ASVCTYTICLLPYTDCKANTNGNRLIGFWHTDVKPPTCLLKRNFTFDVNA
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 ASVCMYTICQLPYTDCKSNTNGNKIIGFWHTDVKPPTCLLKRNFTFDVNA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 ASICQYTICQLPYTDCKPNTGGNKLIGFWHTELKSPVCILKRNFTFNVNA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 ASICQYTICQLPHTYCKPNTGGNTLIGFWHTDLRSPVCILTRNFTFNVNA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA
**:* **** **:* **.**.** :******:::.* *:*.****::***
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus EWLYFHFYQQGGTFYAYYADVSSATTFLFSSYIGAVLTQYFVLPYMCSPT
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus DWLYFHFYQQGGTFYAYYADVASATTFLFSIYIGDVLTQFFVLPFNCEPD
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus EWLYFHFYQQGGTFYAYYADVSSATTFLFSMYIGDVLTQYFVLPYMCTLT
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus DWLYFHFYQQGGTFYAYYANVSSATTFLFSIYIGDVLTQYFVLPYICTPS
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 EWLYFHFYQQGGTFYAYYANVSSATTFLFSIYIGDVLTQYFVLPYICTPM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 EWLYFHFYQQGGTFYAYYADVSSATTFLFSMYIGDVLTQYFVLPYMCTLT
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 EWLYFHFYQQGGTFYAYYADVSSATTFLFSSYIGAVLTQYFVLPYMCNPT
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT
: :******:*********: .******** *** :***::***: *
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus TSGVSSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus KAGVISPQYWVTPLVERQYLFNFNQKGIITSAVDCASSYTAEIKCKTQSM
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus TTGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus TTGVLSPQYWVTPLVKRQYLFNFNQKGVITGAVDCASSYTSEIKCKTQSL
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 SSGVLSPQYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 TTGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 TSGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM
.. :*:*******:***********:**.*********:********:
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLAANTVPSPLNWERK
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus NPSTGVYDLTGYTVQPVGLVYRRVRNLPDCKIEDWLTAKSVPSPLNWERK
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLTAKSVPSPLNWERK
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus LPSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERR
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 SPSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLTAKSVPSPLNWERK
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLAANTVPSPLNWERK
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK
*.****:*:********:***** *** *:**:**:*.:*********:
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNSR
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSVSIDKFAIPNRR
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus TFQNCNFDLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNRR
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus TFQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGGISVDKFAIPRSR
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 TFQNCNFNLSSLLRYVQAESLSCTNIDASKVYGMCFGSVSVDKFAIPRSR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 TFQNCNFDLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNRR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNSR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 TFQNCNFNLSSLLRYVQAESLFCNNMDASKVYGRCFGSISVDKFAVPRSR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR
*******:******:****** *.*:******* ***.:*:****:*. *
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus RVDLQLGKSGLLQSFNYKIDTRATSCQLYYSLAQDNVTVINHNPSSWNRR
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus RVDLQIGNSGFLQSFNYKIDSRATSCQLYYSLAQNNVTVNNHNPSSWNRR
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus RVDLQLGNSGFLQSFNYKIDTRATSCQLYYSLAKNNVTVNNHNPSSWNRR
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus QIDLQIGNSGFLQTANYKIDTAVTSCQLYYSLPKNNVTINNYNPSSWNRR
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 QIDLQIGNSGFLQTANYKIDTAVTSCQLYYSLSKNNVTINNHNPSSWNRR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 RVDLQLGNSGFLQSFNYKIDTRATSCQLYYSLAKNNVTVNNHNPSSWNRR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 RVDLQLGKSGLLQSFNYKISTRATSCQLYYSLAQNNVTVINHNPSSWNRR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR
::***:*:**:**: ****.: .*****:*:*.::***: *:********
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus YGFNDVATFHSGKHDVAYAEACFTVGASYCPCAKPSTVYSCVTG-KPKSA
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus YGFNDVATFGSGKHDVAYAEECFTVGNDYCPCANPSIVSPCTQD-KPKAA
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus YGFNDVATFGTGKHDVAYAEACFTVGASYCPCANPSIVSPCTTG-KPNFA
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus YGFNDAGVFGKNQHDVAYAQQCFTVRSSYCPCAQPDIVSPCTARTKPMSA
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 YGFNDAGVFGKKQHDVAYAQQCFTVRPNYCPCAQPDIVSPCTAATKPSSA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 YGFNDVATFGTGKHDVAYAEACFTVGASYCPCANPSIVSPCTTG-KPNFA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 YGFNDVATFGSGIHDVAYAEACFTVGASYCPCAKPSIVYSCVTG-KPKSA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA
*****...* . ***.**: **** .*****:*. * .*. ** *
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus NCPTGTSNRECNVQASGFKS----------KCDCTCNPSPLTTYDPRCLQ
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus --------------------------------------------------
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus NCPVGTRNRECNPLALGGNL---------FKCDCTCNPSPLTTYDLRCLQ
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus NCPTGTSNRECTVMPLANNQ---------FKCDCTCNPSPLTTYDLRCLQ
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus YCPVGTTHRECSRSGPHLRSGGHRARVGTYTCECTCKPNPLDTYDLRCGQ
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus --------------------------------------------------
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus --------------------------------------------------
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus --------------------------------------------------
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus --------------------------------------------------
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 YCPTGTVHRECSVWSGPHMRSARVGIPGTYTCECTCAPNPLETYDLRCGQ
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 NCPTGTSNRECTVMPLANNQ---------FKCDCTCNPSPLTTYDLRCLQ
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 NCPTGTSHRECNVQASGFKH----------KCDCTCNPSPLTTYDPRCLQ
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 --------------------------------------------------
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 --------------------------------------------------
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 --------------------------------------------------
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 --------------------------------------------------
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 --------------------------------------------------
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus ARSTLGVGDHCEGLGILEDKCGGSNI---CNCSADAFVGWAMDSCLSNGR
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus ARSMLGVGDHCEGLGVLEDKCGGSNV---CNCTADAFVGWSTDSCLSKGR
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus ARSMLGVGDHCEGLGVLEDKCGGSNT---CNCSAHAFVGWAKDSCLANGR
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus IKTIVNVGDHCEGLGVLEDQCGNSDPHKGCVCANASFIGWSHDTCLVNDR
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 IKTIVNVGDHCEGLGVLEDKCGNADPHKGCVCANDSFVGWSHDTCLVNDR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 ARSMLGVGDHCEGLGVLEDKCGGSNT---CNCSAHAFVGWAKDSCLANGR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 ARSMLGVGDHCEGLGILEDKCGGSNI---CNCSADAFVGWAKDSCLSNDR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR
:.*********:***:**.:: * *: :*:**: *:** :.*
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus CHIFSNLMLNGINSGTTCSTDFQLPNTEVVTGVCVKYDLYGITGQGVFKE
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus CHIFSNLLLNGINSGTTCSTDLQLPNTEVVTGVCVKYHLFGITGQGVFKE
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus CHIFSNLMLNGINSGTTCSMDLQLPNTEVVTGVCVKYDLYGITGQGIFKE
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus CQIFANILLNGINSGTTCSTDLQLPNTEVVTGVCVRYDLYGITGQGVFKE
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGVCVRYDLYGITGQGVFKE
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 CHIFSNLMLNGINSGTTCSMDLQLPNTEVVTGVCVKYDLYGITGQGIFKE
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 CHIFSNLMLNGINSGTTCSTDLQLPNTEVVTGVCVKYDLYGITGQGVFKE
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE
*:**:*::*********** *:**********:**:*.*:******:***
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus VKADYYNSWQNLLYDVNGNLNGFRDSVTNKTYLLRSCYSGRVSAAYHQDA
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus VKADYYHSWQNLLYDVNGNLEGFRDIITNKTYTIRSCYSGRVSAAYHQDA
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus VKADYYHSWQNLLYDVNGNLIGFRDFVANKSYTIRSCYSGRVSAAYHQDA
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHSDA
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 AKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHSDA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 VKADYYHSWQNLLYDVNGNLIGFRDFVANKSYTIRSCYSGRVSAAYHQDA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 VKADYYNSWQNLLYDVNGNLNGFRDIVTNKTYLLRSCYSGRVSAAYHQDA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA
.*****:***.********* **** :**:* :***********:*.**
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVINADNSTEQSVDA
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVAV
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVDA
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus PEPALLYRNINCGFVFNNNISREENPLTYFDSYLGCVVNADNHTDQALPN
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 SEPALLYRNINCSFVFNNNISREENPLTYFDSYLGCVVNADNHTEQALPN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVDA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 PEPALLYRNLKCDYVFNNNISREETPLNYFDNYLGCVVNADNSTEHSVDA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 PEPALIYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN
.****:***::*.:**.*******.**.***.*****:**** *:.::
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus CDLRMGSGLCVNYSIAHRARRSVSTGYKLTTFEPFTVSIVNDSVESVGGL
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus CDLRMGSGLCVNYSTSHRARRSISTGYKLTTFEPFTVSIVNDSVQSVGGL
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus CDLRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYTPMLVNDSVQAIDGM
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 CDLRMGAGLCVDYSKARRARRSVSTGYRLTTFEPYTPMLVNDSVQAIDGM
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 CDLRMGSGLCVNYSTAHRARRSVSTGYKLTTFEPFTVSIVNDSVESVGGL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL
******:****:** ::**: *:****:******:* :*****:::.*:
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus YEMQIPTNFTIASHQEFIQTRSPKVTIDCAAFVCGDYTACRQQLVDYGSF
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus YEMQIPINFTIGQHQEFIQTRAPKVTIDCAAFVCGDYTACRQQLVEYGSF
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus YDMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNSVCRQQLVEYGSF
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 YEMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNSVCRQQLVEYGSF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 YEMQIPTNFTIASQQEFIQTRSPKVTIDCAAFVCGDYTVCRQQLVDYGSF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF
*::*** ****. ::**:* *:*************. :.******:****
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLADGISGQIDDINFS
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLADGIGGQIDDINFS
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus CENVNSILNEVNNLLDNMQLQVASALMQGVTVSSRLPDGIAGPIDDINFS
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 CENVNAILNEVNNLLDNMQLQVASALMQGVTVSSSLPDGIAGPIDDINFS
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 CDNINAILGEVNNLIDTMQLQVASALIQGVTLNSRLADGISGQIDDINFS
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS
* *:*:**.*****:*.*********:****:.* *.***.* *******
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus PLLGCLGSDCSE---GTKAAQGRSAIEDVLFDKVKLSDVGFVESYNNCTG
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus PLLGCLGSDCGE--GTTAALKGRSVIEDMLFDKVKLSDVGFVEAYNNCTG
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus PLLGCIGSTCSESENGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 PLLGCIGSTCSESENGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 PLLGCLGSYCSE---GTMAVQGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG
*****:** *.* * ***.***:**************:******
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV
*************************.******:***.:*** ********
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus PFALSVQYRINGLGVTMNVLSENQKMIASSFNNAIGAIQEGFDATNSALA
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFDATNSALA
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALA
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 PFALSVQYRINGLGVTMNVLSENQKMIASSFNNAIGAIQEGFDATNSALA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG
**:**************************:****:****:** ******.
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus KIQSVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAQAQIDRL
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus KLQSVVNANAEALNNLLGQLSNRFGAISASLQEILSRLDALEAQVQVDRL
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 KIQSVVNANAEALNNLLGQLSNRFGAISASLQEILSRLDALEAQVQVDRL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 KIQSVVNSNAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL
*:* ***:********* *****************:**:*:**:.*:***
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus INGRLTALNAYVSKQLSDMTLIKVSAAQAIEKVNECVKSQSPRINFCGNG
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSPRINFCGNG
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus ISGRLTALNAYVSKQLSDSTLIKFSAAQAIEKVNECVKSQTMRINFCGSG
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 INGRLTALNAYVSKQLSDSTLIKFSAAHAIEKVNECVKSQTMRINFCGSG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 INGRLTALNAYVSKHLSDMTLIKVSAAQAIEKVNECVKSQSPRINFCGNG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG
*.*********:**:*** **:*.***:************: ******.*
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus NHILSLVQNAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus NHILSLVQSAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus NHILSLVQNAPYGLYFIHFSYVPTSFTTARVSPGLCIAGDRGLAPKAGYF
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 NHILSLVQNAPYGLYFIHFSYVPTSFTTARVSPGLCIAGDRGLAPKAGYF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 NHILSLVQNAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF
********.************** ****..*******:************
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus VQDHGEWKFTGSNYYYPESIIDKNSVVMSSCAVNYTKAPEVFLNTSITNL
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus VQDNGEWKFTGSGYYYPEPINDKNSVVMSSCAVNYTKAPEVFLNTSIPNL
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus VQDNGEWKFTGSGYYYPEPITDKNSVVMSSCAVNYTKAPEVFLNTSIPNL
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAVNYTKAPEVFLNTSIPNL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 VQDHGEWKFTGSNYYYPESITDKNSVVMSSCAVNYTKAPEVFLNTSITNL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP
***.********.*****.* *****:*****.**************.*
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus PDFKEELDKWFKNQTSIVPDLSFDIGKLNVTFLDLSYEMNRIQDAIKNLN
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQESIKKLN
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus SDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQDAIKKLN
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus PDFKEVLDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQDAINKLN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 PDFKEELDKWFKNQTSIVPDLSFDIGKLNVTFLDLSYEMNRIQDAIKNLN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN
.**** ***********.****:*: *****:***: ******::*::**
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus ESYINLKEIGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGSCC
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGLCC
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGSCC
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 ESYINLKEIGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC
*******::************:************************* **
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus FKKCGNCCDEYGGRQAGIVIHNISSHED
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus FKKCGNCCDEYGGHQDSIVIHNISSHED
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus FKKCGNCCDEYGGHQDSIVIHNISSHED
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus FKKCGNCCDECGGHQDSIVIHNISSHED
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus FKKCGNCCDEYGGHQDSIVIHNISSHED
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus FKKCGNCCDEYGGHQDSIVIHNISSHED
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus FKKCGNCCDEYGGHQDSIVIHNISSHED
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus FKKCGNCCDEYGGHQDSIVIHNISSHED
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus FKKCGNCCDEYGGHQDSIVIHNISSHED
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus0 FKKCGSCCDEYGGHQDSIVIHNISSHEG
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus1 FKKCGNCCDECGGHQDSIVIHNISSHED
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus2 FKKCGNCCDEYGGRQAGIVIHNISSHED
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus3 FKKCGNCCDECGGHQDSIVIHNISSHED
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus4 FKKCGNCCDEYGGHQDSIVIHNISSHED
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus5 FKKCGNCCDEYGGHQDSIVIHNISSHED
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus6 FKKCGNCCDEYGGHQDSIVIHNISSHED
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus7 FKKCGNCCDEYGGHQDSIVIHNISSHED
*****.**** **:* .**********.
>681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus ATGCTATTCGTG---TTTTTAACCCTATTGCCCTCTTGTCTAGGGTATATTGGTGATTTTAGATGTATCAACCGTGTAAACACCAGCATTTCTAATGCGCGCGCACCCTGTGTTAGCACAGAGGTAGTTGATGTTTCTAAAGGTCTTGGTACATATTACGTTTTAGATCGTGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCTGTAGATGGGTCCATGTATCGTAACATGGCTCTAATGGGTACTAATACCTTAAGCCTTAATTGGTTTGAACCGCCCTTTTTATCAGAGTTTAACGATGGCATATATGCTAAGGTAAAGAACCTCAAAGCATCTTTGCCCATAGGCTCGGCTTCATACTTTCCTACTATAATTATAGGTAGTAATTTTGTTAATACTTCCTATACTGTAGTATTGGAACCATACAATGGTATTATTATGGCATCTATTTGCCAGTATACCATTTGTCAATTACCGCACACGGATTGCAAACCTAACACGGGCGGTAACACGCTAATTGGTTTTTGGCACACAGATTTAAGGGCTCCGGTGTGCATTTTAAAGCGTAATTTTACGTTTAATGTTAATGCCGAATGGCTTTATTTTCATTTTTACCAGCAGGGTGGTACTTTTTATGCGTATTATGCAGATGTTTCTTCTGCCACTACGTTTTTGTTTAGTTCGTATATTGGTGCTGTGTTAACACAGTATTTTGTGTTGCCTTATATGTGTAGTCCCACTACCTCAGGTGTTTCCTCACCGCAGTATTGGGTTACACCACTTGTTAAGCGCCAATATTTATTTAATTTTAACCAAAAGGGTATTATTACTAGCGCTGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAGTGTAAGACTCAAAGTATGAATCCCAATACGGGAGTCTATGATTTATCCGGTTACACCGTCCAACCTGTAGGACTAGTGTACCGGCGTGTTAGAAATTTGCCTGATTGTAAAATTGAGGAATGGTTGGCTGCTAACACAGTACCCTCTCCTCTCAATTGGGAGCGCAAAACATTTCAAAATTGTAACTTCAACCTGAGCAGTCTATTAAGATTTGTTCAGGCTGAGTCACTCTCATGTAGTAATATAGATGCTTCCAAGGTTTATGGAATGTGCTTTGGTAGCATATCTATAGATAAATTTGCAATACCCAACAGTCGCCGTGTTGATCTTCAGCTAGGTAAATCGGGTCTTTTGCAATCTTTTAATTATAAAATTGATACAAGAGCGACCTCGTGTCAGCTCTATTACAGTCTTGCACAAGATAATGTCACTGTCATTAACCACAACCCATCCTCCTGGAATAGGCGTTATGGATTTAATGACGTGGCTACATTTCATAGTGGTAAACATGACGTTGCTTATGCAGAGGCATGTTTCACTGTTGGAGCTTCATATTGCCCTTGTGCGAAGCCCAGCACAGTCTATTCATGTGTCACAGGT---AAACCTAAGTCTGCTAATTGCCCAACAGGTACCTCGAATCGTGAGTGTAATGTTCAGGCTTCAGGTTTTAAGTCT------------------------------AAGTGCGATTGCACATGTAACCCTAGTCCTCTAACCACCTATGATCCTAGATGTCTTCAAGCGAGGAGCACGCTTGGCGTAGGTGATCATTGTGAGGGTCTAGGTATTTTAGAAGATAAATGTGGTGGCAGCAACATA---------TGCAATTGTTCGGCTGATGCCTTTGTTGGCTGGGCTATGGACAGTTGTCTATCTAATGGCCGCTGCCATATTTTTAGTAATTTGATGTTAAATGGCATTAATAGTGGTACTACATGTTCCACGGATTTTCAATTGCCTAATACGGAAGTGGTCACCGGCGTTTGTGTCAAGTATGACCTCTACGGTATTACAGGCCAAGGTGTTTTTAAGGAGGTTAAGGCTGATTATTACAATAGTTGGCAGAACCTCTTATATGATGTTAATGGTAACTTAAATGGTTTCCGTGACAGTGTTACCAATAAGACTTATTTATTAAGAAGTTGCTATAGTGGGCGCGTTTCGGCTGCATATCATCAAGATGCACCTGAACCAGCGCTACTATATCGCAATTTAAAATGTGATTATGTGTTTAATAACAACATATCCCGTGAGGAGACACCACTTAACTATTTTGATAGTTATTTGGGTTGTGTTATTAATGCTGATAACTCAACTGAGCAGTCTGTTGACGCGTGTGATTTGCGTATGGGTAGTGGGCTTTGTGTCAACTATTCAATCGCTCACCGTGCGCGCAGGTCTGTCAGTACGGGTTATAAATTAACTACTTTTGAACCATTTACAGTCAGCATTGTCAATGATAGTGTTGAGTCTGTTGGTGGATTATATGAGATGCAAATACCTACTAATTTTACTATAGCTAGCCATCAGGAGTTCATTCAAACGAGGTCTCCGAAGGTTACTATAGATTGTGCTGCATTTGTCTGTGGTGATTATACAGCGTGTAGACAACAGTTGGTTGATTATGGCTCTTTTTGTGATAATATTAATGCCATTCTTGGCGAGGTGAATAACCTCATAGATACTATGCAATTACAAGTTGCTAGTGCTCTGATCCAAGGTGTCACGCTAAGTTCACGCTTGGCAGATGGCATCTCAGGTCAGATTGATGATATTAATTTTAGTCCTCTTCTAGGTTGCCTTGGCTCAGATTGTAGCGAA---------GGCACCAAGGCAGCGCAAGGGCGATCTGCTATAGAGGATGTATTATTTGATAAGGTCAAACTCTCTGATGTTGGCTTTGTCGAATCATATAATAATTGCACTGGAGGTCAAGAAGTTAGAGACCTACTTTGTGTGCAATCTTTTAATGGCATTAAAGTGCTACCGCCTGTATTATCCGAGAGTCAAATCTCTGGTTATACAGCGGGAGCTACTGCATCTGCTATGTTCCCTCCATGGTCTGCAGCTGCAGGTGTGCCATTTGCTTTAAGTGTTCAATATAGAATTAATGGTCTTGGTGTCACTATGAATGTTCTTAGTGAAAACCAGAAAATGATAGCTAGTTCATTTAACAACGCGATAGGTGCTATACAGGAAGGGTTCGATGCAACCAATTCTGCTTTAGCGAAAATTCAGTCCGTTGTCAACGCAAATGCAGAAGCACTCAATAACCTTTTGAATCAGCTTTCCAATAGGTTTGGTGCAATTAGTGCTTCTTTACAGGAAATTCTATCTCGCCTCGATGCTCTTGAAGCTCAGGCTCAGATAGACCGTCTTATTAATGGCAGATTAACTGCACTTAATGCATATGTCTCTAAGCAGCTGAGCGACATGACCCTTATTAAGGTGAGTGCTGCCCAGGCTATAGAGAAAGTTAATGAGTGTGTTAAAAGCCAATCACCTAGGATAAATTTCTGTGGCAATGGCAATCATATATTGTCATTAGTCCAGAATGCGCCTTACGGTTTATATTTTATTCATTTCAGCTATGTGCCTACATCCTTTACAACGGTAAATGTGAGTCCTGGACTATGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATCATGGAGAATGGAAGTTCACAGGTAGCAATTATTACTACCCTGAATCCATTATAGATAAAAACAGTGTCGTGATGAGTAGTTGCGCAGTAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATAACTAATCTACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGTGCCTGATTTATCTTTCGATATCGGGAAATTAAATGTTACATTCCTTGACCTGTCCTATGAGATGAACAGGATTCAGGATGCAATTAAGAATTTAAATGAGAGTTACATCAACCTCAAGGAAATTGGCACATATGAGATGTATGTGAAATGGCCTTGGTATGTTTGGCTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTTTTGTTATTTTTTATATGTTGCTGCACAGGTTGTGGCTCTTGTTGTTTTAAGAAATGTGGAAATTGTTGTGATGAGTATGGAGGACGTCAGGCAGGTATTGTGATACATAATATTTCCTCTCATGAGGAT >A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus ATGCTGTTCGTG---TTTATTCTATTTTTGCCCTCTTGTTTAGGGTATATTGGTGATTTTAGATGTATCCAGCTTGTGAATTCAAACGGTGCTAATGTTAGTGCTCCAAGCATTAGCACTGAGACCGTTGAAGTTTCACAAGGCCTGGGGACATATTATGTGTTAGATCGAGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCGGTCGATGGTTCTAAGTTTAGAAACCTCGCTCTTACGGGAACTAACTCAGTTAGCTTGTCGTGGTTTCAACCACCCTATTTAAGTCAGTTTAATGATGGCATATTTGCGAAGGTGCAGAACCTTAAGACAAGTACGCCATCAGGTGCAACTGCATATTTTCCTACTATAGTTATAGGTAGTTTGTTTGGCTATACTTCCTATACCGTTGTAATAGAGCCATATAATGGTGTTATAATGGCCTCAGTGTGCCAGTATACCATTTGTCAGTTACCTTACACTGATTGTAAGCCTAACACTAATGGTAATAAATTAATAGGGTTTTGGCACACGGATGTAAAACCCCCAATTTGTGTGTTAAAGCGAAATTTCACGCTTAATGTTAATGCTGATGCATTTTATTTTCATTTTTACCAACATGGTGGTACTTTTTATGCGTACTATGCGGATAAACCCTCCGCTACTACGTTTTTGTTTAGTGTATATATTGGCGATATTTTAACACAGTATTATGTGTTACCTTTCATCTGCAACCCAACAGCTGGTAGCACTTTTGCTCCGCGCTATTGGGTTACACCTTTGGTTAAGCGCCAATATTTGTTTAATTTCAACCAGAAGGGTGTCATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAATGTAAGACCCAGAGCATGTTACCTAGCACTGGTGTCTATGAGTTATCCGGTTATACGGTCCAACCAGTTGGAGTTGTATACCGGCGTGTTGCTAACCTCCCAGCTTGTAATATAGAGGAGTGGCTTACTGCTAGGTCAGTCCCCTCCCCTCTCAACTGGGAGCGTAAGACTTTTCAGAATTGTAATTTTAATTTAAGCAGCCTGTTACGTTATGTTCAGGCTGAGAGTTTGTTTTGTAATAATATCGATGCTTCCAAAGTGTATGGCAGGTGCTTTGGTAGTATTTCAGTTGATAAGTTTGCTGTACCCCGAAGTAGGCAAGTTGATTTACAGCTTGGTAACTCTGGATTTCTGCAGACTGCTAATTATAAGATTGATACAGCTGCCACTTCGTGTCAGCTGCATTACACCTTGCCTAAGAATAATGTCACCATAAACAACCATAACCCCTCGTCTTGGAATAGGAGGTATGGCTTTAATGATGCTGGCGTCTTTGGCAAAAACCAACATGACGTTGTTTACGCTCAGCAATGTTTTACTGTAAGATCTAGTTATTGCCCGTGTGCTCAACCGGACATAGTTAGCCCTTGCACTACTCAGACTAAGCCTAAGTCTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTAATGTGGGTGACCATTGTGAAGGCTTAGGTGTTTTAGAAGATAATTGTGGCAATGCTGATCCACATAAGGGTTGTATCTGTGCCAACAATTCATTTATTGGATGGTCACATGATACCTGCCTTGTTAATGATCGCTGCCAAATTTTTGCTAATATATTGTTAAATGGCATTAATAGTGGTACCACATGTTCCACAGATTTGCAGTTGCCTAATACTGAAGTGGTTACTGGCATTTGTGTCAAATATGACCTCTACGGTATTACTGGACAAGGTGTTTTTAAAGAGGTTAAGGCTGACTATTATAATAGCTGGCAAACCCTTCTGTATGATGTTAATGGTAATTTGAATGGTTTTCGTGATCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATTTCATAAAGATGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGCTATGTTTTTAGCAATAATATTTCCCGTGAGGAGAACCCACTTAATTACTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGTGATCTCCGTATGGGTGCTGGCTTATGCGTTGATTATTCAAAATCACGCAGGGCTCACCGATCAGTTTCTACTGGCTATCGGTTAACTACATTTGAGCCATACACTCCGATGTTAGTTAATGATAGTGTCCAATCCGTTGATGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGGCACCATGAGGAGTTCATTCAAACTAGATCTCCAAAGGTGACTATAGATTGTGCTGCATTTGTCTGTGGTGATAACACTGCATGCAGGCAGCAGTTGGTTGAGTATGGCTCTTTCTGTGTTAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAACTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGCTCGAGACTGCCAGACGGCATCTCAGGCCCTATAGATGACATTAATTTTAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCAATCCGAGGGCGTTCTGCTATAGAGGATTTGTTATTTGACAAGGTCAAATTATCTGATGTTGGCTTTGTCGAGGCTTATAATAATTGCACCGGTGGTCAAGAAGTTCGTGACCTCCTTTGTGTACAATCTTTTAATGGCATCAAAGTATTACCTCCTGTGTTGTCAGAGAGTCAGATCTCTGGCTACACAACCGGTGCTACTGCGGCAGCTATGTTCCCACCGTGGTCAGCAGCTGCCGGTGTGCCATTTAGTTTAAGTGTTCAATATAGAATTAATGGTTTAGGTGTCACTATGAATGTGCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAATGCGCTGGGTGCTATCCAGGATGGGTTTGATGCAACCAATTCTGCTTTAGGTAAGATCCAGTCCGTTGTTAATGCAAATGCTGAAGCACTCAATAACTTACTAAATCAACTTTCTAACAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACTCGGCTTGAGGCTGTAGAAGCAAAAGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTTAGTGATAGTACGCTTATTAAAGTTAGTGCTGCTCAGGCCATAGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACCACGCGTATTAATTTCTGTGGCAATGGTAATCATATATTATCTCTTGTCCAGAATGCGCCTTATGGCTTATATTTTATACACTTCAGCTATGTGCCAATATCCTTTACAACCGCAAATGTGAGTCCTGGACTTTGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAATGGAAGTTCACAGGCAGTTCATATTACTACCCTGAACCCATTACAGATAAAAACAGTGTCATTATGAGTAGTTGCGCAGTAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCCACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAGTTAAATGTTACTTTGCTGGACCTGACGTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTCTTTATATGTTGCTGCACAGGTTGTGGCTCATGTTGTTTTAAGAAGTGTGGAAATTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT >MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus ATGCTGTTTGTCGTGTTTATTCTCCTAATACCCTCTTGTTTAGGGTATATTGGTGACTTTAGATGTATCCAGCTCGTGAATTCAAACGGCAACAACGCTTCTGCGCCAAGCATTAGCATTGAAACTGTCGATGTTTCCAAAGGCCTTGGTACTTATTATGTTTTAGATCGAGTTTATTTAAATGCCACATTATTGCTTACTGGTTATTATCCTGTGGACGGTTCCAATTATAGGAATCTCGCGCTTACAGGCACTAATACCCTAAGCCTTAATTGGTATAAACCACCCTTTTTATCAGAGTTTAATGATGGCATATTTGCTAAGGTAAAGAACCTTAAAGCATCTCTGCCCGCTGGCTCATCGGCTTATTTCCCTACTATTATAATAGGCAGTGGTTTTGGTAACACCGCCTATACTATAGTAATGGAACCATATAATGGTATAATTATGGCATCTATTTGCCAGTACACCATTTGTCAATTACCGTATACTGATTGTAAACCTAATACAGGCGGTAATAGTATTATAGGTTTTTGGCACACAGATATAAAATCCCCTGTGTGCATTTTAAAGCGTAATTTCACGTTTAATGTTAATGCCGATTGGCTCTATTTTCATTTTTACCAACAGGGTGGTACTTTTTATGCGTATTATGCAGATGTAGCTTCTGCTACTACGTTTTTATTTAGTATTTATATTGGCGATGTTTTAACGCAATTCTTTGTGTTGCCTTTTAATTGTGAACCTGATAAGGCTGGTGTTATATCACCGCAGTATTGGGTCACACCTTTAGTTGAGCGCCAATATTTGTTTAATTTTAACCAAAAGGGTATTATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCGCTGAAATTAAATGCAAGACTCAAAGTATGAATCCTAGTACGGGAGTCTATGATCTCACTGGTTACACTGTTCAACCTGTTGGTTTAGTGTACCGAAGAGTTAGAAATTTGCCTGATTGTAAAATAGAGGATTGGCTCACCGCTAAAAGCGTGCCGTCTCCTCTCAATTGGGAACGTAAAACATTTCAAAATTGTAACTTTAACCTGAGCAGTCTATTAAGATTTGTCCAGGCTGAGTCACTCTCATGTAGTAATATAGATGCTTCCAAAGTTTATGGAATGTGCTTTGGCAGCGTATCTATAGATAAATTTGCAATACCCAATAGGAGACGCGTTGACCTCCAAATAGGCAATTCTGGGTTTTTGCAGTCTTTTAATTATAAAATAGATTCAAGGGCGACTTCTTGCCAGCTTTATTATAGTCTTGCACAAAATAATGTCACCGTTAATAACCATAACCCGTCCTCCTGGAATAGGCGATATGGATTTAACGATGTGGCAACATTTGGTAGTGGTAAACATGACGTTGCATATGCTGAAGAGTGTTTTACTGTTGGTAATGATTATTGCCCATGTGCTAACCCCAGCATAGTATCGCCATGCACGCAAGAT---AAACCTAAGGCTGCTAATTGTCCAGTAGGTACACGCAATCGAGAGTGTAACCCTCTGGCGCTTGGCGGTAATTTA---------------------------TTTAAGTGCGACTGCACATGTAACCCTAGCCCACTAACTACCTACGACCTTCGCTGCCTCCAGGCTAGGAGCATGCTAGGGGTAGGTGACCATTGTGAAGGACTTGGTGTTTTAGAAGATAAATGTGGTGGAAGCAACGTT---------TGCAATTGTACTGCAGATGCTTTTGTTGGCTGGTCTACGGATAGTTGTCTATCCAAAGGCCGCTGCCACATTTTCTCGAATTTGTTATTAAATGGCATTAATAGTGGAACCACTTGCTCCACTGATTTACAGTTGCCTAATACTGAAGTGGTTACTGGCGTTTGTGTCAAGTATCATCTCTTCGGTATTACTGGTCAAGGTGTTTTTAAGGAGGTTAAAGCCGACTACTATCATAGCTGGCAGAATCTCTTATATGATGTTAATGGCAATCTGGAAGGTTTCCGCGACATCATTACCAATAAAACTTATACTATTAGAAGCTGTTATAGCGGGCGAGTTTCGGCTGCATATCATCAAGATGCACCTGAACCTGCGCTGCTATATCGCAATTTAAAATGTGATTATGTCTTTAACAACAACATCTCCCGTGAGGAGACCCCACTTAACTATTTTGATAGTTATTTGGGCTGTGTTGTTAATGCTGATAACTCAACTGAAGAAGCTGTTGCTGTGTGTGATCTACGTATGGGTAGTGGCCTTTGCGTCAACTATTCAACGTCACATCGAGCTCGCAGGTCCATCAGTACGGGTTATAAATTAACTACTTTTGAACCATTTACAGTTAGCATTGTCAATGATAGTGTTCAGTCTGTGGGTGGATTATATGAGATGCAAATACCAATCAATTTTACTATAGGACAACACCAGGAGTTCATTCAAACTAGAGCTCCAAAGGTAACTATAGATTGTGCGGCTTTTGTCTGTGGTGATTACACAGCATGCCGGCAGCAGTTGGTTGAGTATGGATCATTCTGTGATAATATTAATGCCATTCTTGGCGAGGTTAATAACCTCATAGATACTATGCAACTGCAGGTTGCTAGTGCCCTGATACAAGGTGTCACGCTAAGTTCCCGCTTGGCTGATGGCATTGGTGGTCAGATTGATGATATTAATTTTAGTCCTCTGTTAGGCTGTCTAGGTTCAGATTGTGGTGAA------GGAACCACTGCTGCACTAAAGGGACGGTCGGTTATAGAGGATATGCTGTTCGATAAAGTCAAACTATCAGATGTTGGCTTTGTTGAAGCATATAATAATTGCACTGGTGGTCAGGAAGTCAGAGACCTACTATGTGTGCAATCTTTTAATGGCATAAAAGTGCTGCCTCCTGTATTATCCGAGAGTCAGATCTCCGGATATACAGCTGGTGCTACTGCGTCTGCTATGTTCCCACCTTGGTCTGCAGCCGCGGGTGTGCCATTTTCTTTAAGTGTTCAATATAGAATTAATGGTCTGGGTGTCACTATGAATGTTCTTAGTGAAAACCAGAAAATGATAGCTAGTGCTTTCAACAATGCGATTGGTGCTATACAGGAGGGCTTTGATGCCACTAATTCTGCATTAGCAAAAATTCAATCCGTTGTGAATGCAAATGCTGAAGCACTTAATAATCTGTTGCAACAATTGTCCAACAGATTTGGTGCAATTAGTGCTTCTTTACAGGAAATTCTATCCCGCCTTGATGCTCTTGAAGCGCAGGCTCAGATAGACCGTCTTATAAATGGCAGATTAACTGCACTTAATGCATATGTTTCTAAGCAGCTGAGTGACATGACCCTAGTTAAGGTAAGTGCCGCTCAAGCTATAGAGAAAGTTAATGAGTGTGTTAAAAGCCAATCACCTAGGATTAATTTCTGTGGCAATGGCAATCATATATTGTCATTAGTCCAGAGTGCGCCTTATGGCTTATATTTTATACACTTCAGCTATGTGCCTACATCCTTTACAACGGTAAATGTGAGTCCTGGACTTTGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATAATGGAGAGTGGAAGTTCACTGGTAGTGGTTATTACTACCCTGAACCCATAAATGATAAAAACAGTGTCGTTATGAGTAGTTGTGCAGTAAACTACACAAAAGCGCCTGAAGTTTTCTTGAACACTTCAATACCAAATCTACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCCATTGCGCCTGATTTATCTCTCGATTTCGAGAAATTAAATGTTACTTTCCTGGACCTGACCGATGAGATGAACAGGATTCAGGAGTCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTACATTTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTCTTTATATGCTGCTGCACAGGTTGCGGCTCATGTTGTTTTAAGAAATGTGGAAATTGTTGTGATGAGTATGGAGGACACCAGGATAGTATTGTCATCCATAATATATCCTCTCACGAGGAT >MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus ATGCTATTCGTG---TTTTTAACCTTGTTGCCCTCTTCTCTAGGGTATATTGGTGATTTTAGATGTATCCAACTTGTAAATACCGACACCTCTAATGCCAGCGCTCCAAGCGTTAGTACAGAGGTAGTTGATGTTTCCAAAGGGATTGGTACTTATTATGTTTTAGATCGAGTCTATTTAAATGCCACACTATTGCTTACTGGTTATTACCCTGTAGATGGGTCCATGTATAGAAACATGGCTCTAACGGGAATTAATACCATAAGCCTTAATTGGTACAAACCACCCTTTTTATCAGAGTTTAATGATGGCATATTTGCTAAGGTAAAGAACCTTAAAGCATCTTTGCCCAAAGATTCTATTTCATATTTCCCTACTATAATTATAGGTAGTAATTTTGTCACCACTTCCTATACTGTAGTATTGGAACCGTATAATGGTATAATTATGGCATCCATTTGCCAGTATACCATTTGTCAACTACCGTACACGGATTGCAAACCGAATACGGGCGGTAATAAGTTAATTGGCTTTTGGCACACAGAGCTAAAATCCCCTGTGTGCATTTTAAAGCGTAATTTTACGTTTAATGTTAATGCCGAATGGCTTTATTTTCATTTTTACCAGCAGGGTGGTACTTTTTATGCGTATTATGCGGATGTTTCTTCTGCTACTACGTTTTTGTTTAGTATGTATATTGGTGATGTGTTAACACAATATTTTGTGTTGCCTTATATGTGTACTCTCACTACAACAGGTGTCTTTTCACCGCAGTATTGGGTTACACCTCTTGTCAAGCGCCAATATTTATTTAATTTTAATCAAAAGGGTATTATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGCGAAATAAAGTGTAAGACCCAAAGTATGAATCCCAATACGGGAGTTTATGATTTATCCGGTTACACCGTCCAACCTGTAGGATTAGTGTACCGGCGTGTTAGAAATTTGCCTGATTGTAAAATTGAGGAATGGCTAACTGCTAAGTCTGTACCTTCTCCTCTCAATTGGGAGCGCAAAACATTTCAAAATTGTAACTTCGACCTGAGCAGTCTATTAAGATTTGTTCAGGCTGAGTCACTCTCATGTAGTAATATAGATGCTTCCAAGGTTTATGGTATGTGCTTTGGTAGTATATCTATAGACAAGTTTGCGATACCCAATAGACGCCGAGTTGATTTGCAGCTAGGCAACTCTGGGTTTTTGCAATCCTTTAATTACAAAATAGATACAAGAGCTACTTCGTGTCAGCTCTATTATAGTCTTGCAAAAAATAATGTCACTGTCAATAACCATAACCCGTCCTCTTGGAACAGGCGTTATGGGTTCAATGATGTGGCTACATTTGGAACTGGTAAACATGACGTTGCTTATGCTGAGGCTTGTTTTACCGTGGGAGCATCATATTGCCCTTGCGCGAACCCCAGCATAGTGTCGCCATGTACCACTGGA---AAACCTAACTTTGCCAATTGCCCTACAGGCACCTCGAATCGTGAGTGCACTGTTATGCCATTGGCTAATAATCAA---------------------------TTTAAGTGTGATTGCACTTGTAACCCTAGTCCTCTAACCACCTATGATCTTAGATGTCTCCAAGCAAGAAGCATGCTTGGCGTAGGTGATCATTGTGAAGGTCTAGGAGTTTTAGAAGATAAATGTGGTGGCAGCAACACC---------TGCAATTGTTCTGCTCATGCCTTTGTTGGCTGGGCTAAGGATAGTTGCTTGGCTAATGGCCGCTGTCACATTTTTAGTAATTTGATGTTAAATGGCATTAATAGTGGTACTACATGTTCCATGGATTTGCAATTGCCTAATACTGAAGTGGTCACTGGCGTCTGCGTCAAATATGACCTCTACGGTATAACAGGCCAAGGTATTTTTAAGGAGGTTAAGGCTGACTATTATCATAGTTGGCAAAACCTCTTATATGATGTTAATGGCAACTTAATCGGATTTCGCGATTTTGTTGCTAATAAGAGTTATACTATTCGAAGTTGCTATAGTGGGCGGGTCTCGGCTGCATATCATCAAGATGCACCAGAACCAGCGCTACTATATCGCAATTTAAAATGTGACTATGTCTTTAACAACAACATATCCCGTGAGGAGACACCACTTAACTATTTCGATAGTTATCTTGGTTGTGTTGTTAATGCTGACAACTCAACTGAAGAAGCTGTTGACGCGTGTGATTTGCGTATGGGTAGTGGGCTTTGTGTCAACTATTCAACGTCTCACCGCGCTCGCAGCTCTGTCAGCACGGGTTATAAATTAACTACTTTTGAACCATTTACAGTCCGCATTGTCAATGATAGTGTTGAGTCTGTTGATGGGTTATATGAGCTGCAAATACCAACCAACTTTACTATAGCTAGCCATCAGGAGTTCGTTCAAACGAGGTCTCCAAAGGTTACTATAGACTGTGCTGCATTTGTCTGTGGTGGCCACACAGCATGCCGTCAGCAGTTGGTTGAGTACGGCTCATTCTGTGATAATATTAATGCCATTCTTGGCGAGGTAAATAACCTCATAGATACTATGCAACTTCAAGTTGCAAGTGCTTTAATCCAAGGTGTCACGTTAAGCTCACGCTTATCGGATGGCATTGGTGGTCAAATAGATGATATTAATTTTAGTCCTCTGCTTGGTTGTTTAGGTTCTGACTGTGGCGAA------GTTACCATGGCAGCTCAAACCGGACGATCTGCTATAGAGGATGTATTATTTGACAAAGTCAAACTCTCTGATGTTGGCTTTGTCGAAGCATATAACAATTGCACTGGAGGCCAAGAAGTTAGAGACCTACTTTGTGTGCAATCTTTTAATGGCATCAAAGTGCTACCGCCTGTGTTGTCTGAGAATCAAATTTCTGGTTATACAGCGGGAGCTACTGTATCTGCTATGTTC---CCATGGTCTGCAGCTGCAGGTGTGCCATTTTCTTTAAGTGTTCAATATAGAATTAATGGTCTTGGTGTCACTATGAATGTTCTTAGTGAAAATCAGAAAATGATAGCAAGTGCATTTAACAACGCGATAGGTGCTATACAGGAAGGGTTTGCTGCAACCAATTCTGCCTTAGCAAAAATGCAGTTCGTTGTCAATGCAAATGCGGAAGCACTCAATAATTTATTAAACCAGCTTTCCAATAGGTTTGGTGCAATTAGTGCTTCTTTACAAGAAATTCTATCTCGCCTAGATGCTCTTGAAGCGCAGGCTCAGATAGACCGTCTTATTAATGGCAGATTAACTGCACTTAATGCATATGTCTCTAAGCAGCTGAGTGACATGACCCTTGTTAAGGTGAGTGCAGCCCAGGCTATAGAGAAAGTTAATGAGTGTGTTAAAAGCCAATCATCTAGGATAAATTTCTGTGGCAATGGCAATCATATATTGTCATTAGTCCAGAATGCGCCTTATGGTTTATATTTTATTCATTTCAGCTATGTGCCTACTTCCTTTACAACGGCAAATGTGAGTCCTGGGCTATGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAGTGGAAGTTCACAGGTAGTAATTATTATTACCCTGAACCCATTACAGATAAAAATAGTGTCGTGATGAGTAGTTGCGCAGCAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCTACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAAAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAATTAAACGTTACCCTCCTGGACCTGACTGATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGTTACATCAACCTCAAGGACGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTGTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTTTTCATATGTTGCTGCACGGGTTGTGGCTCATGTTGTTTCAAGAAGTGTGGAAATTGTTGTGATGAGTGTGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT >MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus ATGTTGTTCGTG---TTTTTGCTCCTACTACCTTCTTGTTTAGGGTATATAGGTGATTTTAGATGTATCAACCTTGTAAATACCGACATGTCTAATGCTTCCGCTCCTAGCGTTAGCACTGAGACTGTCGATGTTTCCAAGGGTCTTGGTACTTATTATGTTTTGGATCGAGTTTATTTAAATGCCACGCTATTGCTTACGGGTTATTATCCTGTAGATGGTTCCAATTATCGAAACCTAGCTCTCACAGGCACTAATACCATAAGCTTAACGTGGTTTAAGCCACCCTTCTTAAGTGAGTTCAATGATGGTATATTTGCTAAGGTCAAGAACCTTAAGGCAAATACGCCAAAAGGTGCAACCTCATATTTTCCTACTATAGTTATAGGTAGTTTGTTTGGCCATACTTCCTATACCGTAGTTTTAGAGCCATATAATAATATTATAATGGCTTCTGTTTGCACATATACCATTTGCCTATTACCTTACACGGACTGTAAGGCTAATACCAATGGTAATCGTCTTATTGGCTTTTGGCACACAGATGTCAAACCGCCGACCTGTCTTTTAAAGCGTAATTTTACGTTTGATGTTAATGCCGATTGGCTCTATTTTCATTTTTACCAACAGGGTGGTACTTTTTATGCGTATTATGCAAATGTTTCATCTGCTACTACGTTTTTATTTAGCATTTATATTGGCGATGTTTTAACACAATATTTTGTGTTACCTTATATATGCACCCCGTCTACTACCGGAGTGTTATCACCCCAGTATTGGGTTACTCCTTTAGTTAAGCGCCAATATCTATTTAATTTCAACCAAAAGGGTGTAATTACTGGTGCTGTTGATTGCGCCAGTAGTTACACGAGTGAAATAAAATGTAAGACCCAAAGTCTCTTACCGAGTACTGGTGTCTATGATTTATCTGGTTACACTGTCCAACCTGTTGGAGTTGTGTACCGGCGTGTTCCTAACCTACCTGATTGTAAAATAGAGGAATGGCTCACTGCTAAATCTGTGCCATCACCCCTTAATTGGGAGCGTAGGACTTTTCAAAATTGTAATTTTAATTTAAGCAGTCTGTTACGTTATGTTCAGGCTGAGTCTTTGTCGTGTAATAATATAGATGCGTCCAAAGTGTATGGTATGTGCTTTGGCGGTATCTCAGTTGATAAGTTTGCTATTCCGCGAAGTCGCCAAATTGATTTACAAATTGGTAACTCTGGATTTTTGCAAACTGCGAATTATAAGATTGATACTGCTGTTACATCGTGTCAGCTGTATTACAGTCTTCCTAAGAATAATGTTACTATAAATAACTATAACCCCTCGTCATGGAACAGGAGGTATGGTTTTAATGATGCTGGTGTATTTGGCAAAAATCAACATGATGTTGCCTATGCCCAGCAATGTTTTACTGTAAGATCTAGCTATTGCCCGTGTGCACAACCGGACATAGTTAGCCCGTGCACTGCCCGGACTAAGCCCATGTCTGCCTATTGCCCAGTAGGCACGACGCATCGGGAATGTTCTAGGAGTGGGCCTCATTTGCGCTCTGGTGGTCACCGTGCACGTGTAGGTACTTATACGTGTGAATGCACTTGTAAGCCCAACCCATTGGACACTTATGATCTCCGCTGTGGGCAAATTAAAACTATTGTTAACGTAGGTGATCATTGTGAAGGTCTGGGTGTTTTAGAAGATCAATGTGGCAATAGCGATCCACATAAAGGCTGTGTCTGTGCCAATGCTTCTTTCATTGGATGGTCACATGATACCTGCTTAGTAAATGATCGCTGCCAAATTTTTGCTAATATATTGTTAAATGGCATTAATAGTGGGACTACGTGTTCCACAGATTTACAATTGCCTAATACTGAAGTGGTTACTGGCGTGTGTGTCAGATATGACCTCTACGGTATTACTGGTCAAGGTGTTTTTAAGGAGGTTAAGGCTGACTATTACAATAGCTGGCAAACCCTCTTATATGATGTTAATGGTAACTTAAATGGTTTTCGTGATCTTACCACTAACAAGACGTATACGATAAGGAGCTGTTATAGTGGCCGCGTTTCTGCTGCGTACCATAGTGATGCACCAGAACCCGCCCTGCTCTATCGTAATATAAATTGTGGTTTTGTGTTCAATAATAATATTTCCCGTGAGGAAAACCCACTTACCTATTTCGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAATCATACGGACCAGGCGCTACCTAATTGCGACCTCCGCATGGGTGCTGGACTATGCGTTGATTATTCGAAATCACGCAGAGCGCGCCGATCAGTTTCTACTGGCTATCGTTTAACAACATTCGAGCCTTATACTCCTATGTTAGTTAATGATAGTGTTCAAGCCATTGATGGCATGTATGATATGCAAATACCAACCAATTTTACTATAGGACACCATGAAGAGTTCATTCAAATCAGGGCTCCGAAGGTGACTATAGACTGTGCTGCATTTGTCTGTGGTGATAACTCAGTGTGCAGACAGCAGTTGGTTGAGTATGGCTCGTTCTGTGAGAATGTTAATTCCATCCTTAATGAGGTGAATAACCTCTTGGATAATATGCAATTACAAGTTGCAAGTGCTTTAATGCAAGGTGTCACTGTAAGTTCTAGATTGCCGGATGGTATCGCAGGACCTATAGATGATATCAATTTCTCTCCTCTACTCGGATGCATAGGTTCAACTTGTTCTGAATCTGAAAATGGCCCTAGTGCAATCCGGGGGCGATCTGCTATAGAGGATTTATTATTTGACAAAGTCAAATTGTCTGATGTTGGCTTTGTCGAGGCTTATAATAATTGCACTGGCGGTCAAGAAGTGCGTGACCTTCTCTGTGTGCAATCTTTTAATGGCATCAAAGTGCTACCTCCTGTGTTGTCTGAGAGTCAAATCTCCGGTTACACGACGGGTGCTACTGCCGCAGCTATGTTCCCACCGTGGTCTGCAGCTGCTGGTGTGCCTTTCAGTTTAAGTGTTCAATATAGAATTAATGGTTTGGGTGTCACTATGAATGTGCTTAGTGAGAACCAAAAGATGATAGCTAGTGCATTTAACAACGCGCTGGGTGCTATACAGGATGGGTTCGATGCAACCAATTCTGCTCTAGCCAAACTCCAGTCTGTTGTCAATGCAAATGCAGAAGCACTCAATAATCTACTAGGCCAACTCTCTAATAGGTTTGGCGCTATTAGTGCTTCTTTACAAGAAATTCTATCTCGACTAGATGCTCTTGAAGCGCAAGTCCAGGTCGATCGTCTTATTAGTGGCCGGCTAACTGCCCTTAATGCGTATGTCTCCAAGCAATTGAGTGACAGCACGCTTATTAAATTTAGTGCTGCTCAGGCCATAGAAAAGGTCAATGAGTGCGTTAAGAGTCAAACCATGCGTATTAATTTCTGCGGCAGTGGTAATCATATATTATCACTAGTCCAGAATGCGCCTTATGGTTTATATTTTATACACTTCAGCTATGTGCCCACATCCTTTACCACTGCGCGTGTTAGTCCTGGACTATGCATTGCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATAATGGAGAGTGGAAGTTCACTGGTAGTGGTTATTACTACCCTGAACCCATTACAGATAAAAACAGCGTCGTGATGAGTAGTTGTGCAGTAAACTACACAAAAGCGCCTGAAGTTTTCTTGAACACTTCAATACCAAATCTATCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCCATCGCGCCTGATTTATCTCTCGATTTCGAGAAATTAAATGTTACTTTCCTGGACCTGACCGATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTACATTTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTCTTTATATGTTGCTGCACAGGTTGCGGCTTATGTTGTTTTAAGAAATGTGGAAATTGTTGTGATGAGTATGGAGGACACCAGGATAGTATTGTCATCCATAATATATCCTCACATGAGGAT >MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGCTGTTCGTG---TTTATTCTATTTTTGCCCTCTTGCCTAGGGTATATTGGTGATTTTAGATGTATCCAGCTTGTGAATTCAAACGGTGCTAATGTTAGTGCTCCAAGCATTAGCACTGAGACCGTTGAAGTTTCACAAGGCCTGGGGACATATTATGTGTTAGATCGAGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCGGTCGATGGTTCTAAGTTTAGAAACCTCGCTCTTACGGGAACTAACTCAGTTAGCTTGTCGTGGTTTCAACCACCCTATTTAAGTCAGTTTAATGATGGCATATTTGCGAAGGTGCAGAACCTTAAGACAAGTACGCCATCAGGTGCAACTGCATATTTTCCTACTATAGTTATAGGTAGTTTGTTTGGCTATACTTCCTATACCGTTGTAATAGAGCCATATAATGGTGTTATAATGGCCTCAGTGTGCCAGTATACCATTTGTCAGTTACCTTACACTGATTGTAAGCCTAACACTAATGGTAATAAATTAATAGGGTTTTGGCACACGGATGTAAAACCCCCAATTTGTGTGTTAAAGCGAAATTTCACGCTTAATGTTAATGCTGATGCATTTTATTTTCATTTTTACCAACATGGTGGTACTTTTTATGCGTACTATGCGGATAAACCCTCCGCTACTACGTTTTTGTTTAGTGTATATATTGGCGATATTTTAACACAGTATTATGTGTTACCTTTCATCTGCAACCCAACAGCTGGTAGCACTTTTGCTCCGCGCTATTGGGTTACACCTTTGGTTAAGCGCCAATATTTGTTTAATTTCAACCAGAAGGGTGTCATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAATGTAAGACCCAGAGCATGTTACCTAGCACTGGTGTCTATGAGTTATCCGGTTATACGGTCCAACCAGTTGGAGTTGTATACCGGCGTGTTGCTAACCTCCCAGCTTGTAATATAGAGGAGTGGCTTACTGCTAGGTCAGTCCCCTCCCCTCTCAACTGGGAGCGTAAGACTTTTCAGAATTGTAATTTTAATTTAAGCAGCCTGTTACGTTATGTTCAGGCTGAGAGTTTGTTTTGTAATAATATCGATGCTTCCAAAGTGTATGGCAGGTGCTTTGGTAGTATTTCAGTTGATAAGTTTGCTGTACCCCGAAGTAGGCAAGTTGATTTACAGCTTGGTAACTCTGGATTTCTGCAGACTGCTAATTATAAGATTGATACAGCTGCCACTTCGTGTCAGCTGCATTACACCTTGCCTAAGAATAATGTCACCATAAACAACCATAACCCCTCGTCTTGGAATAGGAGGTATGGCTTTAATGATGCTGGCGTCTTTGGCAAAAACCAACATGACGTTGTTTACGCTCAGCAATGTTTTACTGTAAGATCTAGTTATTGCCCGTGTGCTCAACCGGACATAGTTAGCCCTTGCACTACTCAGACTAAGCCTAAGTCTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTAATGTGGGTGACCATTGTGAAGGCTTAGGTGTTTTAGAAGATAATTGTGGCAATGCTGATCCACATAAGGGTTGTATCTGTGCCAACAATTCATTTATTGGATGGTCACATGATACCTGCCTTGTTAATGATCGCTGCCAAATTTTTGCTAATATATTGTTAAATGGCATTAATAGTGGTACCACATGTTCCACAGATTTGCAGTTGCCTAATACTGAAGTGGTTACTGGCATTTGTGTCAAATATGACCTCTACGGTATTACTGGACAAGGTGTTTTTAAAGAGGTTAAGGCTGACTATTATAATAGCTGGCAAACCCTTCTGTATGATGTTAATGGTAATTTGAATGGTTTTCGTGATCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATTTCATAAAGATGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGCTATGTTTTTAGCAATAATATTTCCCGTGAGGAGAACCCACTTAATTACTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGTGATCTCCGTATGGGTGCTGGCTTATGCGTTGATTATTCAAAATCACGCAGGGCTCACCGATCAGTTTCTACTGGCTATCGGTTAACTACATTTGAGCCATACACTCCGATGTTAGTTAATGATAGTGTCCAATCCGTTGATGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGGCACCATGAGGAGTTCATTCAAACTAGATCTCCAAAGGTGACTATAGATTGTGCTGCATTTGTCTGTGGTGATAACACTGCATGCAGGCAGCAGTTGGTTGAGTATGGCTCTTTCTGTGTTAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAACTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGCTCGAGACTGCCAGACGGCATCTCAGGCCCTATAGATGACATTAATTTTAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCAATCCGAGGGCGTTCTGCTATAGAGGATTTGTTATTTGACAAGGTCAAATTATCTGATGTTGGCTTTGTCGAGGCTTATAATAATTGCACCGGTGGTCAAGAAGTTCGTGACCTCCTTTGTGTACAATCTTTTAATGGCATCAAAGTATTACCTCCTGTGTTGTCAGAGAGTCAGATCTCTGGCTACACAACCGGTGCTACTGCGGCAGCTATGTTCCCACCGTGGTCAGCAGCTGCCGGTGTGCCATTTAGTTTAAGTGTTCAATATAGAATTAATGGTTTAGGTGTCACTATGAATGTGCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAATGCGCTGGGTGCTATCCAGGATGGGTTTGATGCAACCAATTCTGCTTTAGGTAAGATCCAGTCCGTTGTTAATGCAAATGCTGAAGCACTCAATAACTTACTAAATCAACTTTCTAACAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACTCGGCTTGAGGCTGTAGAAGCAAAAGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTTAGTGATAGTACGCTTATTAAAGTTAGTGCTGCTCAGGCCATAGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACCACGCGTATTAATTTCTGTGGCAATGGTAATCATATATTATCTCTTGTCCAGAATGCGCCTTATGGCTTATATTTTATACACTTCAGCTATGTGCCAATATCCTTTACAACCGCAAATGTGAGTCCTGGACTTTGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAATGGAAGTTCACAGGCAGTTCATATTACTACCCTGAACCCATTACAGATAAAAACAGTGTCATTATGAGTAGTTGCGCAGTAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCCACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAGTTAAATGTTACTTTGCTGGACCTGACGTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTCTTTATATGTTGCTGCACAGGTTGTGGCTCATGTTGTTTTAAGAAGTGTGGAAATTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT >MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGCTGTTCGTG---TTTATTCTATTTTTGCCCTCTTGCCTAGGGTATATTGGTGATTTTAGATGTATCCAGCTTGTGAATTCAAACGGTGCTAATGTTAGTGCTCCAAGCATTAGCACTGAGACCGTTGAAGTTTCACAAGGCCTGGGGACATATTATGTGTTAGATCGAGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCGGTCGATGGTTCTAAGTTTAGAAACCTCGCTCTTACGGGAACTAACTCAGTTAGCTTGTCGTGGTTTCAACCACCCTATTTAAGTCAGTTTAATGATGGCATATTTGCGAAGGTGCAGAACCTTAAGACAAGTACGCCATCAGGTGCAACTGCATATTTTCCTACTATAGTTATAGGTAGTTTGTTTGGCTATACTTCCTATACCGTTGTAATAGAGCCATATAATGGTGTTATAATGGCCTCAGTGTGCCAGTATACCATTTGTCAGTTACCTTACACTGATTGTAAGCCTAACACTAATGGTAATAAATTAATAGGGTTTTGGCACACGGATGTAAAACCCCCAATTTGTGTGTTAAAGCGAAATTTCACGCTTAATGTTAATGCTGATGCATTTTATTTTCATTTTTACCAACATGGTGGTACTTTTTATGCGTACTATGCGGATAAACCCTCCGCTACTACGTTTTTGTTTAGTGTATATATTGGCGATATTTTAACACAGTATTATGTGTTACCTTTCATCTGCAACCCAACAGCTGGTAGCACTTTTGCTCCGCGCTATTGGGTTACACCTTTGGTTAAGCGCCAATATTTGTTTAATTTCAACCAGAAGGGTGTCATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAATGTAAGACCCAGAGCATGTTACCTAGCACTGGTGTCTATGAGTTATCCGGTTATACGGTCCAACCAGTTGGAGTTGTATACCGGCGTGTTGCTAACCTCCCAGCTTGTAATATAGAGGAGTGGCTTACTGCTAGGTCAGTCCCCTCCCCTCTCAACTGGGAGCGTAAGACTTTTCAGAATTGTAATTTTAATTTAAGCAGCCTGTTACGTTATGTTCAGGCTGAGAGTTTGTTTTGTAATAATATCGATGCTTCCAAAGTGTATGGCAGGTGCTTTGGTAGTATTTCAGTTGATAAGTTTGCTGTACCCCGAAGTAGGCAAGTTGATTTACAGCTTGGTAACTCTGGATTTCTGCAGACTGCTAATTATAAGATTGATACAGCTGCCACTTCGTGTCAGCTGCATTACACCTTGCCTAAGAATAATGTCACCATAAACAACCATAACCCCTCGTCTTGGAATAGGAGGTATGGCTTTAATGATGCTGGCGTCTTTGGCAAAAACCAACATGACGTTGTTTACGCTCAGCAATGTTTTACTGTAAGATCTAGTTATTGCCCGTGTGCTCAACCGGACATAGTTAGCCCTTGCACTACTCAGACTAAGCCTAAGTCTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTAATGTGGGTGACCATTGTGAAGGCTTAGGTGTTTTAGAAGATAATTGTGGCAATGCTGATCCACATAAGGGTTGTATCTGTGCCAACAATTCATTTATTGGATGGTCACATGATACCTGCCTTGTTAATGATCGCTGCCAAATTTTTGCTAATATATTGTTAAATGGCATTAATAGTGGTACCACATGTTCCACAGATTTGCAGTTGCCTAATACTGAAGTGGTTACTGGCATTTGTGTCAAATATGACCTCTACGGTATTACTGGACAAGGTGTTTTTAAAGAGGTTAAGGCTGACTATTATAATAGCTGGCAAACCCTTCTGTATGATGTTAATGGTAATTTGAATGGTTTTCGTGATCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATTTCATAAAGATGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGCTATGTTTTTAGCAATAATATTTCCCGTGAGGAGAACCCACTTAATTACTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGTGATCTCCGTATGGGTGCTGGCTTATGCGTTGATTATTCAAAATCACGCAGGGCTCACCGATCAGTTTCTACTGGCTATCGGTTAACTACATTTGAGCCATACACTCCGATGTTAGTTAATGATAGTGTCCAATCCGTTGATGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGGCACCATGAGGAGTTCATTCAAACTAGATCTCCAAAGGTGACTATAGATTGTGCTGCATTTGTCTGTGGTGATAACACTGCATGCAGGCAGCAGTTGGTTGAGTATGGCTCTTTCTGTGTTAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAACTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGCTCGAGACTGCCAGACGGCATCTCAGGCCCTATAGATGACATTAATTTTAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCAATCCGAGGGCGTTCTGCTATAGAGGATTTGTTATTTGACAAGGTCAAATTATCTGATGTTGGCTTTGTCGAGGCTTATAATAATTGCACCGGTGGTCAAGAAGTTCGTGACCTCCTTTGTGTACAATCTTTTAATGGCATCAAAGTATTACCTCCTGTGTTGTCAGAGAGTCAGATCTCTGGCTACACAACCGGTGCTACTGCGGCAGCTATGTTCCCACCGTGGTCAGCAGCTGCCGGTGTGCCATTTAGTTTAAGTGTTCAATATAGAATTAATGGTTTAGGTGTCACTATGAATGTGCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAATGCGCTGGGTGCTATCCAGGATGGGTTTGATGCAACCAATTCTGCTTTAGGTAAGATCCAGTCCGTTGTTAATGCAAATGCTGAAGCACTCAATAACTTACTAAATCAACTTTCTAACAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACTCGGCTTGAGGCTGTAGAAGCAAAAGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTTAGTGATAGTACGCTTATTAAAGTTAGTGCTGCTCAGGCCATAGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACCACGCGTATTAATTTCTGTGGCAATGGTAATCATATATTATCTCTTGTCCAGAATGCGCCTTATGGCTTATATTTTATACACTTCAGCTATGTGCCAATATCCTTTACAACCGCAAATGTGAGTCCTGGACTTTGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAATGGAAGTTCACAGGCAGTTCATATTACTACCCTGAACCCATTACAGATAAAAACAGTGTCATTATGAGTAGTTGCGCAGTAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCCACCCGACTTTAAGGAGGTGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAGTTAAATGTTACTTTGCTGGACCTGACGTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTCTTTATATGTTGCTGCACAGGTTGTGGCTCATGTTGTTTTAAGAAGTGTGGAAATTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT >MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGCTGTTCGTG---TTTATTCTATTTTTGCCCTCTTGCCTAGGGTATATTGGTGATTTTAGATGTATCCAGCTTGTGAATTCAAACGGTGCTAATGTTAGTGCTCCAAGCATTAGCACTGAGACCGTTGAAGTTTCACAAGGCCTGGGGACATATTATGTGTTAGATCGAGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCGGTCGATGGTTCTAAGTTTAGAAACCTCGCTCTTACGGGAACTAACTCAGTTAGCTTGTCGTGGTTTCAACCACCCTATTTAAGTCAGTTTAATGATGGCATATTTGCGAAGGTGCAGAACCTTAAGACAAGTACGCCATCAGGTGCAACTGCATATTTTCCTACTATAGTTATAGGTAGTTTGTTTGGCTATACTTCCTATACCGTTGTAATAGAGCCATATAATGGTGTTATAATGGCCTCAGTGTGCCAGTATACCATTTGTCAGTTACCTTACACTGATTGTAAGCCTAACACTAATGGTAATAAATTAATAGGGTTTTGGCACACGGATGTAAAACCCCCAATTTGTGTGTTAAAGCGAAATTTCACGCTTAATGTTAATGCTGATGCATTTTATTTTCATTTTTACCAACATGGTGGTACTTTTTATGCGTACTATGCGGATAAACCCTCCGCTACTACGTTTTTGTTTAGTGTATATATTGGCGATATTTTAACACAGTATTATGTGTTACCTTTCATCTGCAACCCAACAGCTGGTAGCACTTTTGCTCCGCGCTATTGGGTTACACCTTTGGTTAAGCGCCAATATTTGTTTAATTTCAACCAGAAGGGTGTCATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAATGTAAGACCCAGAGCATGTTACCTAGCACTGGTGTCTATGAGTTATCCGGTTATACGGTCCAACCAGTTGGAGTTGTATACCGGCGTGTTGCTAACCTCCCAGCTTGTAATATAGAGGAGTGGCTTACTGCTAGGTCAGTCCCCTCCCCTCTCAACTGGGAGCGTAAGACTTTTCAGAATTGTAATTTTAATTTAAGCAGCCTGTTACGTTATGTTCAGGCTGAGAGTTTGTTTTGTAATAATATCGATGCTTCCAAAGTGTATGGCAGGTGCTTTGGTAGTATTTCAGTTGATAAGTTTGCTGTACCCCGAAGTAGGCAAGTTGATTTACAGCTTGGTAACTCTGGATTTCTGCAGACTGCTAATTATAAGATTGATACAGCTGCCACTTCGTGTCAGCTGCATTACACCTTGCCTAAGAATAATGTCACCATAAACAACCATAACCCCTCGTCTTGGAATAGGAGGTATGGCTTTAATGATGCTGGCGTCTTTGGCAAAAACCAACATGACGTTGTTTACGCTCAGCAATGTTTTACTGTAAGATCTAGTTATTGCCCGTGTGCTCAACCGGACATAGTTAGCCCTTGCACTACTCAGACTAAGCCTAAGTCTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTAATGTGGGTGACCATTGTGAAGGCTTAGGTGTTTTAGAAGATAATTGTGGCAATGCTGATCCACATAAGGGTTGTATCTGTGCCAACAATTCATTTATTGGATGGTCACATGATACCTGCCTTGTTAATGATCGCTGCCAAATTTTTGCTAATATATTGTTAAATGGCATTAATAGTGGTACCACATGTTCCACAGATTTGCAGTTGCCTAATACTGAAGTGGTTACTGGCATTTGTGTCAAATATGACCTCTACGGTATTACTGGACAAGGTGTTTTTAAAGAGGTTAAGGCTGACTATTATAATAGCTGGCAAACCCTTCTGTATGATGTTAATGGTAATTTGAATGGTTTTCGTGATCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATTTCATAAAGATGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGCTATGTTTTTAGCAATAATATTTCCCGTGAGGAGAACCCACTTAATTACTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGTGATCTCCGTATGGGTGCTGGCTTATGCGTTGATTATTCAAAATCACGCAGGGCTCACCGATCAGTTTCTACTGGCTATCGGTTAACTACATTTGAGCCATACACTCCGATGTTAGTTAATGATAGTGTCCAATCCGTTGATGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGGCACCATGAGGAGTTCATTCAAACTAGATCTCCAAAGGTGACTATAGATTGTGCTGCATTTGTCTGTGGTGATAACACTGCATGCAGGCAGCAGTTGGTTGAGTATGGCTCTTTCTGTGTTAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAACTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGCTCGAGACTGCCAGACGGCATCTCAGGCCCTATAGATGACATTAATTTTAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCAATCCGAGGGCGTTCTGCTATAGAGGATTTGTTATTTGACAAGGTCAAATTATCTGATGTTGGCTTTGTCGAGGCTTATAATAATTGCACCGGTGGTCAAGAAGTTCGTGACCTCCTTTGTGTACAATCTTTTAATGGCATCAAAGTATTACCTCCTGTGTTGTCAGAGAGTCAGATCTCTGGCTACACAACCGGTGCTACTGCGGCAGCTATGTTCCCACCGTGGTCAGCAGCTGCCGGTGTGCCATTTAGTTTAAGTGTTCAATATAGAATTAATGGTTTAGGTGTCACTATGAATGTGCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAATGCGCTGGGTGCTATCCAGGATGGGTTTGATGCAACCAATTCTGCTTTAGGTAAGATCCAGTCCGTTGTTAATGCAAATGCTGAAGCACTCAATAACTTACTAAATCAACTTTCTAACAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACTCGGCTTGAGGCTGTAGAAGCAAAAGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTTAGTGATAGTACGCTTATTAAAGTTAGTGCTGCTCAGGCCATAGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACCACGCGTATTAATTTCTGTGGCAATGGTAATCATATATTATCTCTTGTCCAGAATGCGCCTTATGGCTTATATTTTATACACTTCAGCTATGTGCCAATATCCTTTACAACCGCAAATGTGAGTCCTGGACTTTGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAATGGAAGTTCACAGGCAGTTCATATTACTACCCTGAACCCATTACAGATAAAAACAGTGTCATTATGAGTAGTTGCGCAGTAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCCACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAGTTAAATGTTACTTTGCTGGACCTGACGTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTCTTTATATGTTGCTGCACAGGTTGTGGCTCATGTTGTTTTAAGAAGTGTGGAAATTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT >MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGCTGTTCGTG---TTTATTCTATTTTTGCCCTCTTGTTTAGGGTATATTGGTGATTTTAGATGTATCCAGCTTGTGAATTCAAACGGTGCTAATGTTAGTGCTCCAAGCATTAGCACTGAGACCGTTGAAGTTTCACAAGGCCTGGGGACATATTATGTGTTAGATCGAGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCGGTCGATGGTTCTAAGTTTAGAAACCTCGCTCTTACGGGAACTAACTCAGTTAGCTTGTCGTGGTTTCAACCACCCTATTTAAGTCAGTTTAATGATGGCATATTTGCGAAGGTGCAGAACCTTAAGACAAGTACGCCATCAGGTGCAACTGCATATTTTCCTACTATAGTTATAGGTAGTTTGTTTGGCTATACTTCCTATACCGTTGTAATAGAGCCATATAATGGTGTTATAATGGCCTCAGTGTGCCAGTATACCATTTGTCAGTTACCTTACACTGATTGTAAGCCTAACACTAATGGTAATAAATTAATAGGGTTTTGGCACACGGATGTAAAACCCCCAATTTGTGTGTTAAAGCGAAATTTCACGCTTAATGTTAATGCTGATGCATTTTATTTTCATTTTTACCAACATGGTGGTACTTTTTATGCGTACTATGCGGATAAACCCTCCGCTACTACGTTTTTGTTTAGTGTATATATTGGCGATATTTTAACACAGTATTATGTGTTACCTTTCATCTGCAACCCAACAGCTGGTAGCACTTTTGCTCCGCGCTATTGGGTTACACCTTTGGTTAAGCGCCAATATTTGTTTAATTTCAACCAGAAGGGTGTCATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAATGTAAGACCCAGAGCATGTTACCTAGCACTGGTGTCTATGAGTTATCCGGTTATACGGTCCAACCAGTTGGAGTTGTATACCGGCGTGTTGCTAACCTCCCAGCTTGTAATATAGAGGAGTGGCTTACTGCTAGGTCAGTCCCCTCCCCTCTCAACTGGGAGCGTAAGACTTTTCAGAATTGTAATTTTAATTTAAGCAGCCTGTTACGTTATGTTCAGGCTGAGAGTTTGTTTTGTAATAATATCGATGCTTCCAAAGTGTATGGCAGGTGCTTTGGTAGTATTTCAGTTGATAAGTTTGCTGTACCCCGAAGTAGGCAAGTTGATTTACAGCTTGGTAACTCTGGATTTCTGCAGACTGCTAATTATAAGATTGATACAGCTGCCACTTCGTGTCAGCTGCATTACACCTTGCCTAAGAATAATGTCACCATAAACAACCATAACCCCTCGTCTTGGAATAGGAGGTATGGCTTTAATGATGCTGGCGTCTTTGGCAAAAACCAACATGACGTTGTTTACGCTCAGCAATGTTTTACTGTAAGATCTAGTTATTGCCCGTGTGCTCAACCGGACATAGTTAGCCCTTGCACTACTCAGACTAAGCCTAAGTCTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTAATGTGGGTGACCATTGTGAAGGCTTAGGTGTTTTAGAAGATAATTGTGGCAATGCTGATCCACATAAGGGTTGTATCTGTGCCAACAATTCATTTATTGGATGGTCACATGATACCTGCCTTGTTAATGATCGCTGCCAAATTTTTGCTAATATATTGTTAAATGGCATTAATAGTGGTACCACATGTTCCACAGATTTGCAGTTGCCTAATACTGAAGTGGTTACTGGCATTTGTGTCAAATATGACCTCTACGGTATTACTGGACAAGGTGTTTTTAAAGAGGTTAAGGCTGACTATTATAATAGCTGGCAAACCCTTCTGTATGATGTTAATGGTAATTTGAATGGTTTTCGTGATCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATTTCATAAAGATGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGCTATGTTTTTAGCAATAATATTTCCCGTGAGGAGAACCCACTTAATTACTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGTGATCTCCGTATGGGTGCTGGCTTATGCGTTGATTATTCAAAATCACGCAGGGCTCACCGATCAGTTTCTACTGGCTATCGGTTAACTACATTTGAGCCATACACTCCGATGTTAGTTAATGATAGTGTCCAATCCGTTGATGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGGCACCATGAGGAGTTCATTCAAACTAGATCTCCAAAGGTGACTATAGATTGTGCTGCATTTGTCTGTGGTGATAACACTGCATGCAGGCAGCAGTTGGTTGAGTATGGCTCTTTCTGTGTTAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAACTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGCTCGAGACTGCCAGACGGCATCTCAGGCCCTATAGATGACATTAATTTTAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCAATCCGAGGGCGTTCTGCTATAGAGGATTTGTTATTTGACAAGGTCAAATTATCTGATGTTGGCTTTGTCGAGGCTTATAATAATTGCACCGGTGGTCAAGAAGTTCGTGACCTCCTTTGTGTACAATCTTTTAATGGCATCAAAGTATTACCTCCTGTGTTGTCAGAGAGTCAGATCTCTGGCTACACAACCGGTGCTACTGCGGCAGCTATGTTCCCACCGTGGTCAGCAGCTGCCGGTGTGCCATTTAGTTTAAGTGTTCAATATAGAATTAATGGTTTAGGTGTCACTATGAATGTGCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAATGCGCTGGGTGCTATCCAGGATGGGTTTGATGCAACCAATTCTGCTTTAGGTAAGATCCAGTCCGTTGTTAATGCAAATGCTGAAGCACTCAATAACTTACTAAATCAACTTTCTAACAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACTCGGCTTGAGGCTGTAGAAGCAAAAGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTTAGTGATAGTACGCTTATTAAAGTTAGTGCTGCTCAGGCCATAGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACCACGCGTATTAATTTCTGTGGCAATGGTAATCATATATTATCTCTTGTCCAGAATGCGCCTTATGGCTTATATTTTATACACTTCAGCTATGTGCCAATATCCTTTACAACCGCAAATGTGAGTCCTGGACTTTGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAATGGAAGTTCACAGGCAGTTCATATTACTACCCTGAACCCATTACAGATAAAAACAGTGTCATTATGAGTAGTTGCGCAGTAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCCACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAGTTAAATGTTACTTTGCTGGACCTGACGTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTCTTTATATGTTGCTGCACAGGTTGTGGCTCATGTTGTTTTAAGAAGTGTGGAAATTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT >MHV_MI_S_BAJ04696_1_1994_Australia_Mouse_Murine_coronavirus ATGCTGTTTGTCGTGTTTATCCTTTTATTGCCCTCTTGTTTAGGGTATATTGGTGATTTTAGGTGTATCCAGACCGTGAATTCGAACGGCAACAATGCTTCTGCGCCAAGCATTAGCACTGAAGTAGTCGATGTTTCCAAAGGCTTGGGCACTTATTATGTTTTAGATCGAGTTTATTTAAATGCCACATTATTACTTACTGGTTATTATCCTGTAGACGGTTCCAGTTATCGGAACCTCGCCCTTACAGGCACTAATACCGTAAGCTTAGCGTGGTTTAAACCACCCTTTTTAAGTGAGTTCAATGATGGCATATTTGCTAAGGTCAAGAACCTCAAGGCAAATACGCCAAACGGTGCTATCTCATTTTTCCCTACTATAGTTATGGGTAGTTTGTTTGGCAATACTTCTTACACTGTAGTTCTGGAGCCATATAATAATATTATTATGGCCTCTGTTTGTATGTATACCATTTGTCAATTGCCTTACACTGATTGTAAGTCTAATACCAATGGTAATAAGATTATTGGCTTTTGGCACACAGATGTCAAACCGCCGACTTGTCTTTTAAAGCGTAATTTTACGTTTGATGTTAATGCCGAATGGCTTTACTTTCATTTCTATCAACAGGGTGGTACTTTTTATGCGTATTATGCAAATGTATCATCTGCTACTACGTTTTTATTTAGCATTTATATTGGCGATGTTTTAACACAATATTTTGTCTTACCCTATATATGTACTCCGATGAGTTCCGGAGTTTTATCACCCCAGTATTGGGTTACTCCTTTAGTTAAGCGCCAATATTTATTTAATTTTAATCAAAAGGGTGTCATTACTAGTGCTGTTGATTGCGCTAGTAGTTACACTAGTGAAATAAAATGTAAGACCCAAAGTCTCTCACCGAGTACTGGTGTTTACGATCTATCCGGTTACACTGTCCAACCTGTTGGAGTTGTGTACCGGCGTGTTCCTAACCTGCCTGATTGTAAGATAGAGGAGTGGCTCACTGCTAAATCTGTGCCATCACCCCTCAATTGGGAGCGTAGGACTTTTCAAAATTGTAATTTTAATTTAAGCAGTCTGTTACGTTATGTTCAGGCTGAGTCTTTGTCGTGTACTAATATTGATGCTTCCAAAGTGTATGGTATGTGCTTTGGTAGTGTCTCAGTTGATAAGTTTGCTATTCCCCGGAGTCGCCAAATTGATTTGCAAATTGGCAACTCTGGATTCTTGCAAACGGCCAATTATAAGATTGATACTGCTGTTACATCGTGTCAGCTGTATTACAGTCTTTCTAAGAATAATGTTACTATAAATAACCATAACCCTTCGTCATGGAACAGGAGGTATGGTTTTAATGATGCTGGTGTATTTGGCAAGAAGCAGCATGATGTTGCCTATGCCCAGCAATGTTTTACTGTACGGCCTAACTACTGCCCGTGTGCTCAACCGGATATAGTTAGCCCATGCACGGCAGCGACTAAGCCAAGTTCAGCTTACTGCCCTACAGGAACAGTCCATCGGGAATGTTCTGTTTGGAGTGGTCCTCATATGCGCTCGGCACGTGTAGGTATTCCTGGTACTTATACGTGTGAGTGCACGTGTGCGCCTAACCCATTGGAGACCTATGATCTCCGCTGTGGGCAAATTAAAACCATTGTTAATGTGGGTGACCATTGTGAAGGACTAGGTGTTTTAGAAGATAAATGTGGCAATGCCGATCCTCATAAGGGCTGTGTCTGCGCCAACGATTCCTTTGTGGGATGGTCGCATGACACTTGCCTAGTGAATGATCGCTGCCAAATTTTTGCTAACATATTGTTAAATGGCATTAATAGTGGTACTACTTGTTCCACAGATTTACAATTGCCTAATACCGAAGTGGTTACTGGCGTGTGCGTCAGATATGATCTCTACGGTATTACTGGTCAAGGTGTTTTTAAGGAGGCTAAGGCTGACTATTACAATAGCTGGCAAACCCTCTTATATGATGTTAATGGTAACTTAAATGGTTTTCGTGATCTTACCACTAACAAGACGTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCCGCGTACCATAGTGACGCATCAGAACCAGCCCTGCTCTATCGTAATATAAATTGTAGTTTTGTGTTTAATAATAATATTTCTCGTGAGGAAAACCCACTCACCTATTTCGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAATCATACGGAGCAGGCGCTACCTAATTGCGACCTCCGCATGGGCGCTGGACTATGCGTTGATTATTCAAAAGCACGCAGAGCGCGTCGATCAGTTTCTACTGGCTATCGTTTAACAACATTCGAGCCTTACACTCCTATGTTAGTTAATGATAGTGTTCAAGCCATTGATGGCATGTATGAGATGCAAATACCAACCAATTTTACTATTGGCCACCATGAAGAGTTCATTCAAATAAGAGCTCCGAAGGTGACTATAGATTGTGCTGCATTTGTCTGTGGTGATAATTCAGTGTGCAGACAACAGTTGGTTGAGTATGGCTCGTTCTGTGAGAATGTTAATGCCATCCTTAATGAGGTTAACAACCTCTTGGATAATATGCAATTACAAGTTGCAAGTGCTTTAATGCAAGGTGTCACTGTAAGTTCTAGCCTGCCGGATGGCATCGCAGGACCTATAGATGATATCAATTTCTCTCCTCTACTTGGATGCATAGGTTCAACTTGTTCTGAATCTGAAAATGGACCTAGTGCAATCCGAGGGCGTTCTGCTATAGAGGACTTATTATTTGACAAGGTCAAACTATCTGATGTTGGCTTTGTCGAGGCTTATAATAACTGTACTGGAGGCCAAGAAGTCCGTGACCTCCTCTGTGTACAATCTTTTAATGGCATCAAAGTATTACCGCCTGTGTTGTCTGAGAGCCAAATCTCCGGTTACACAACGGGTGCTACTGCAGCAGCTATGTTCCCACCATGGTCTGCAGCTGCTGGTGTGCCTTTCAGTTTAAGTGTTCAATACAGAATTAATGGTTTGGGTGTCACTATGAATGTGCTTAGTGAGAACCAAAAGATGATAGCTAGTGCATTTAACAACGCGCTGGGTGCTATACAGGATGGGTTCGATGCAACCAATTCTGCTCTAGCCAAAATCCAGTCCGTTGTTAATGCAAATGCAGAAGCACTCAATAATTTATTAGGCCAATTGTCCAATAGGTTTGGCGCTATTAGTGCTTCTTTGCAAGAAATTCTATCTCGACTAGACGCTCTTGAAGCTCAAGTCCAGGTCGATCGTCTTATTAATGGTCGGCTAACTGCCCTTAATGCGTATGTCTCCAAGCAATTGAGTGACAGTACGCTTATTAAATTTAGTGCTGCTCATGCCATAGAAAAGGTCAATGAGTGTGTTAAGAGTCAAACCATGCGTATTAATTTTTGCGGCAGTGGTAATCATATATTATCACTAGTCCAGAATGCGCCTTATGGTTTATATTTTATACACTTCAGTTATGTGCCTACATCCTTTACCACTGCGCGTGTTAGTCCCGGACTATGCATTGCTGGCGATAGAGGATTGGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAATGGAAGTTCACTGGTAGTAACTATTACTACCCTGAACCCATTACAGATAAAAATAGTGTCGTCATGAGTAGTTGTGCAGTAAACTACACAAAGGCGCCTGAAGTTTTCTTGAACACTTCAATACCAAATCTACCCGACTTTAAGGAGGAGCTAGATAAATGGTTTAAGAATCAGACGTCCATTGCGCCTGATTTATCTCTCGATTTTGAGAAACTAAATGTTACTTTCCTGGACCTGACGGATGAGATGAACAGGATTCAGGATGCAATTAATAAGTTAAATGAGAGTTACATCAACCTTAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATATCTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTTTTTATATGCTGCTGCACAGGTTGCGGCTCATGTTGTTTTAAGAAATGTGGTAGTTGTTGTGATGAGTATGGAGGACACCAGGATAGCATTGTCATCCACAATATATCCTCGCATGAGGGT >ML_11_orf3_AAF68923_1_NA_NA_Unknown_Murine_coronavirus ATGCTATTCGTG---TTTTTAACCTTGTTGCCCTCTTCTCTAGGGTATATTGGTGATTTTAGATGTATCCAACTTGTAAATACCGACACCTCTAATGCCAGCGCTCCAAGCGTTAGTACAGAGGTAGTTGATGTTTCCAAAGGGATTGGTACTTATTATGTTTTAGATCGAGTCTATTTAAATGCCACACTATTGCTTACTGGTTATTACCCTGTAGATGGGTCCATGTATAGAAACATGGCTCTAACGGGAATTAATACCATAAGCCTTAATTGGTACAAACCACCCTTTTTATCAGAGTTTAATGATGGCATATTTGCTAAGGTAAAGAACCTTAAAGCATCTTTGCCCAAAGATTCTATTTCATATTTCCCTACTATAATTATAGGTAGTAATTTTGTCACCACTTCCTATACTGTAGTATTGGAACCGTATAATGGTATAATTATGGCATCCATTTGCCAGTATACCATTTGTCAACTACCGTACACGGATTGCAAACCGAATACGGGCGGTAATAAGTTAATTGGCTTTTGGCACACAGAGCTAAAATCCCCTGTGTGCATTTTAAAGCGTAATTTTACGTTTAATGTTAATGCCGAATGGCTTTATTTTCATTTTTACCAGCAGGGTGGTACTTTTTATGCGTATTATGCGGATGTTTCTTCTGCTACTACGTTTTTGTTTAGTATGTATATTGGTGATGTGTTAACACAATATTTTGTGTTGCCTTATATGTGTACTCTCACTACAACAGGTGTCTTTTCACCGCAGTATTGGGTTACACCTCTTGTCAAGCGCCAATATTTATTTAATTTTAATCAAAAGGGTATTATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGCGAAATAAAGTGTAAGACCCAAAGTATGAATCCCAATACGGGAGTTTATGATTTATCCGGTTACACCGTCCAACCTGTAGGATTAGTGTACCGGCGTGTTAGAAATTTGCCTGATTGTAAAATTGAGGAATGGCTAACTGCTAAGTCTGTACCTTCTCCTCTCAATTGGGAGCGCAAAACATTTCAAAATTGTAACTTCGACCTGAGCAGTCTATTAAGATTTGTTCAGGCTGAGTCACTCTCATGTAGTAATATAGATGCTTCCAAGGTTTATGGTATGTGCTTTGGTAGTATATCTATAGACAAGTTTGCGATACCCAATAGACGCCGAGTTGATTTGCAGCTAGGCAACTCTGGGTTTTTGCAATCCTTTAATTACAAAATAGATACAAGAGCTACTTCGTGTCAGCTCTATTATAGTCTTGCAAAAAATAATGTCACTGTCAATAACCATAACCCGTCCTCTTGGAACAGGCGTTATGGGTTCAATGATGTGGCTACATTTGGAACTGGTAAACATGACGTTGCGTATGCTGAGGCTTGTTTTACCGTGGGAGCATCATATTGCCCTTGCGCGAACCCCAGCATAGTGTCGCCATGTACCACTGGA---AAACCTAACTTTGCCAATTGCCCTACAGGCACCTCGAATCGTGAGTGCACTGTTATGCCATTGGCTAATAATCAA---------------------------TTTAAGTGTGATTGCACTTGTAACCCTAGTCCTCTAACCACCTATGATCTTAGATGTCTCCAAGCAAGAAGCATGCTTGGCGTAGGTGATCATTGTGAAGGTCTAGGAGTTTTAGAAGATAAATGTGGTGGCAGCAACACC---------TGCAATTGTTCTGCTCATGCCTTTGTTGGCTGGGCTAAGGATAGTTGCTTGGCTAATGGCCGCTGTCACATTTTTAGTAATTTGATGTTAAATGGCATTAATAGTGGTACTACATGTTCCATGGATTTGCAATTGCCTAATACTGAAGTGGTCACTGGCGTCTGCGTCAAATATGACCTCTACGGTATAACAGGCCAAGGTATTTTTAAGGAGGTTAAGGCTGACTATTATCATAGTTGGCAAAACCTCTTATATGATGTTAATGGCAACTTAATCGGATTTCGCGATTTTGTTGCTAATAAGAGTTATACTATTCGAAGTTGCTATAGTGGGCGGGTCTCGGCTGCATATCATCAAGATGCACCAGAACCAGCGCTACTATATCGCAATTTAAAATGTGACTATGTCTTTAACAACAACATATCCCGTGAGGAGACACCACTTAACTATTTCGATAGTTATCTTGGTTGTGTTGTTAATGCTGACAACTCAACTGAAGAAGCTGTTGACGCGTGTGATTTGCGTATGGGTAGTGGGCTTTGTGTCAACTATTCAACGTCTCACCGCGCTCGCAGCTCTGTCAGCACGGGTTATAAATTAACTACTTTTGAACCATTTACAGTCCGCATTGTCAATGATAGTGTTGAGTCTGTTGATGGGTTATATGAGCTGCAAATACCAACCAACTTTACTATAGCTAGCCATCAGGAGTTCGTTCAAACGAGGTCTCCAAAGGTTACTATAGACTGTGCTGCATTTGTCTGTGGTGGCCACACAGCATGCCGTCAGCAGTTGGTTGAGTACGGCTCATTCTGTGATAATATTAATGCCATTCTTGGCGAGGTAAATAACCTCATAGATACTATGCAACTTCAAGTTGCAAGTGCTTTAATCCAAGGTGTCACGTTAAGCTCACGCTTATCGGATGGCATTGGTGGTCAAATAGATGATATTAATTTTAGTCCTCTGCTTGGTTGTTTAGGTTCTGACTGTGGCGAA------GTTACCATGGCAGCTCAAACCGGACGATCTGCTATAGAGGATGTATTATTTGACAAAGTCAAACTCTCTGATGTTGGCTTTGTCGAAGCATATAACAATTGCACTGGAGGCCAAGAAGTTAGAGACCTACTTTGTGTGCAATCTTTTAATGGCATCAAAGTGCTACCGCCTGTGTTGTCTGAGAATCAAATTTCTGGTTATACAGCGGGAGCTACTGTATCTGCTATGTTC---CCATGGTCTGCAGCTGCAGGTGTGCCATTTTCTTTAAGTGTTCAATATAGAATTAATGGTCTTGGTGTCACTATGAATGTTCTTAGTGAAAATCAGAAAATGATAGCAAGTGCATTTAACAACGCGATAGGTGCTATACAGGAAGGGTTTGCTGCAACCAATTCTGCCTTAGCAAAAATGCAGTTCGTTGTCAATGCAAATGCGGAAGCACTCAATAATTTATTAAACCAGCTTTCCAATAGGTTTGGTGCAATTAGTGCTTCTTTACAAGAAATTCTATCTCGCCTAGATGCTCTTGAAGCGCAGGCTCAGATAGACCGTCTTATTAATGGCAGATTAACTGCACTTAATGCATATGTCTCTAAGCAGCTGAGTGACATGACCCTTGTTAAGGTGAGTGCAGCCCAGGCTATAGAGAAAGTTAATGAGTGTGTTAAAAGCCAATCATCTAGGATAAATTTCTGTGGCAATGGCAATCATATATTGTCATTAGTCCAGAATGCGCCTTATGGTTTATATTTTATTCATTTCAGCTATGTGCCTACTTCCTTTACAACGGCAAATGTGAGTCCTGGGCTATGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAGTGGAAGTTCACAGGTAGTAATTATTATTACCCTGAACCCATTACAGATAAAAATAGTGTCGTGATGAGTAGTTGCGCAGCAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCTACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAAAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAATTAAACGTTACCCTCCTGGACCTGACTGATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGTTACATCAACCTCAAGGACGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTGTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTTTTCATATGTTGCTGCACGGGTTGTGGCTCATGTTGTTTCAAGAAGTGTGGAAATTGTTGTGATGAGTGTGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT >Parker_S_YP_003029848_1_NA_NA_Rat_Murine_coronavirus ATGCTATTCGTG---TTTTTAACCCTATTGCCCTCTTGTCTAGGGTATATTGGTGATTTTAGATGTATCAACCGTGTAAACACCAGCATTTCTAATGCGCGCGCACCCAGTGTTAGCACAGAGGTAGTTGATGTTTCTAAAGGTCTTGGTACATATTACGTTTTAGATCGCGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCTGTACATGGGTCCATGTATCGTAACATGGCTCTAATGGGTACTAATACCTTAAGCCTTAATTGGTTTGAACCGCCCTTTTTATCAGAGTTTAACGATGGCATATATGCTAAGGTAAAGAACCTTAAAGCATCTTTGCCCATAGGCTCGGCTTCATACTTTCCTACTATAATTATAGGTAGTAATTTTGTTAATACTTCCTATACTGTAGTATTGGAACCATACAATGGTATTATTATGGCATCTATTTGCCAGTATACCATTTGTCAATTACCGCACACGTATTGCAAACCTAATACGGGCGGTAACACGCTAATTGGTTTTTGGCACACAGATTTAAGGTCTCCGGTGTGCATTTTAACGCGTAATTTTACGTTTAATGTTAATGCCGAATGGCTTTATTTTCATTTTTATCAGCAGGGTGGTACTTTTTATGCGTATTATGCAGATGTTTCTTCTGCCACTACGTTTTTGTTTAGTTCGTATATTGGTGCTGTGTTAACACAGTATTTTGTGTTGCCTTATATGTGTAATCCCACTACCTCAGGTGTTTTCTCACCGCAGTATTGGGTTACACCTCTTGTTAAGCGCCAATATTTATTTAATTTTAACCAAAAGGGTATTATTACTAGCGCAGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAGTGTAAGACTCAAAGTATGAATCCCAATACGGGAGTCTATGATTTATCCGGTTACACCGTCCAACCTGTAGGACTAGTGTACCGGCGTGTTAGAAATTTGCCTGATTGTAAAATTGAGGAATGGCTTGCTGCTAACACAGTACCCTCTCCTCTCAATTGGGAGCGCAAAACATTTCAAAATTGTAACTTCAACCTGAGCAGTCTATTAAGATTTGTTCAGGCTGAGTCACTCTCATGTAGTAATATAGATGCTTCCAAGGTTTATGGAATGTGCTTTGGTAGCATATCTATAGATAAATTTGCAATACCCAACAGTCGCCGTGTTGATCTTCAGCTAGGTAAATCGGGTCTTTTGCAATCTTTTAACTATAAAATTAGTACAAGAGCGACCTCGTGTCAGCTCTATTACAGTCTTGCACAAAATAATGTCACTGTCATTAACCACAACCCATCCTCCTGGAATAGGCGTTATGGATTTAATGACGTGGCTACATTTGGTAGTGGTATACATGACGTGGCTTATGCAGAGGCATGTTTCACTGTTGGAGCTTCATATTGCCCTTGTGCGAAGCCCAGCATAGTCTATTCATGTGTCACAGGT---AAACCTAAGTCTGCTAATTGCCCAACAGGTACCTCGCATCGTGAGTGTAATGTTCAGGCTTCAGGTTTTAAGCAT------------------------------AAGTGCGATTGCACATGTAACCCTAGTCCTCTAACCACCTATGATCCTAGATGTCTTCAAGCGCGGAGCATGCTTGGCGTAGGTGATCATTGTGAGGGTCTAGGTATTTTAGAAGATAAATGTGGTGGCAGCAACATA---------TGCAATTGTTCGGCTGATGCCTTTGTTGGCTGGGCTAAGGACAGTTGTCTATCTAATGACCGCTGCCATATTTTTAGTAATTTGATGTTAAATGGCATTAATAGTGGTACTACATGTTCCACTGATCTGCAATTGCCTAATACGGAAGTGGTCACTGGCGTTTGTGTCAAGTATGACCTCTACGGTATTACAGGCCAAGGTGTTTTTAAGGAGGTTAAGGCTGATTATTATAATAGTTGGCAGAACCTCTTATATGATGTTAATGGTAACTTAAATGGTTTCCGTGACATTGTTACTAATAAGACTTATTTATTAAGAAGTTGCTATAGTGGGCGCGTTTCGGCTGCATATCATCAAGATGCACCTGAACCAGCGCTACTATATCGCAATTTAAAATGTGATTATGTGTTTAATAACAACATATCCCGTGAGGAGACACCACTTAACTATTTTGATAATTATTTGGGTTGTGTTGTTAATGCTGATAACTCAACTGAGCATTCTGTTGACGCGTGTGATTTGCGTATGGGTAGTGGGCTCTGTGTCAACTATTCAACCGCTCACCGTGCTCGTAGGTCTGTCAGTACGGGTTATAAATTAACTACTTTTGAACCATTTACAGTCAGCATTGTCAATGATAGTGTTGAGTCTGTAGGTGGATTATATGAGATGCAAATACCTACCAATTTTACTATAGCTAGCCAGCAGGAGTTTATTCAAACGAGGTCTCCGAAGGTTACTATAGATTGTGCTGCATTTGTCTGTGGCGATTATACAGTGTGTAGACAACAGTTGGTTGATTATGGCTCTTTTTGTGATAATATTAATGCCATTCTTGGCGAGGTGAATAACCTCATAGATACTATGCAACTACAAGTTGCTAGTGCTCTGATCCAAGGTGTCACGCTAAATTCACGCTTGGCAGATGGCATCTCAGGTCAGATTGATGATATTAATTTTAGCCCTCTTCTAGGTTGCCTTGGCTCATATTGCAGCGAA---------GGCACCATGGCAGTGCAAGGGCGATCTGCTATAGAGGATGTATTATTTGATAAGGTCAAACTCTCTGATGTTGGCTTTGTCGAAGCATATAATAATTGCACTGGAGGTCAAGAAGTTAGAGACCTACTTTGTGTGCAATCTTTCAATGGCATTAAAGTGCTACCGCCTGTATTATCCGAGAGTCAAATCTCTGGTTATACAGCGGGAGCTACTGCATCTGCTATGTTCCCTCCATGGTCTGCAGCTGCAGGTGTGCCATTTGCTTTAAGTGTTCAATATAGAATTAATGGTCTTGGTGTCACTATGAATGTTCTTAGTGAAAACCAGAAAATGATAGCTAGTTCATTTAACAACGCGATAGGTGCTATACAGGAAGGGTTCGATGCTACCAATTCTGCTTTAGCGAAAATTCAGTCCGTTGTCAATTCAAATGCAGAAGCACTCAATAACCTTTTGAATCAGCTTTCCAATAGGTTTGGTGCAATTAGTGCTTCTTTACAGGAAATTCTATCCCGCCTTGATGCTCTTGAAGCGCAGGCTCAGATAGACCGTCTTATTAATGGCAGATTAACTGCACTTAATGCATATGTATCTAAGCATCTGAGCGACATGACCCTTATTAAGGTGAGTGCTGCCCAGGCTATAGAGAAAGTTAATGAGTGTGTTAAAAGCCAATCACCTAGGATAAATTTCTGTGGCAATGGCAATCATATATTGTCATTAGTCCAGAATGCGCCTTACGGTTTATATTTTATTCATTTCAGCTATGTGCCCACATCCTTTACAACGGTAAATGTGAGTCCTGGACTATGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATCATGGAGAATGGAAGTTCACAGGTAGCAATTATTACTACCCTGAATCCATTACAGATAAAAACAGTGTCGTGATGAGTAGTTGCGCAGTAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATAACTAATCTACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGTGCCTGATTTATCTTTCGATATCGGGAAATTAAATGTTACATTCCTTGACCTGTCCTATGAGATGAACAGGATTCAGGATGCAATTAAGAATTTAAATGAGAGTTACATCAACCTCAAGGAAATTGGCACATATGAGATGTATGTGAAATGGCCTTGGTATGTTTGGCTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTTTTGTTATTTTTTATATGTTGCTGCACAGGTTGTGGCTCTTGTTGTTTTAAGAAATGTGGAAATTGTTGTGATGAGTATGGAGGACGTCAGGCAGGTATTGTGATACATAATATTTCCTCTCATGAGGAT >Penn_97_1_ORF3_AAF69334_1_NA_NA_Unknown_Murine_coronavirus ATGCTGTTCGTG---TTTATTCTATTTTTGCCCTCTTGTTTAGGGTATATTGGTGATTTTAGATGTATCCAGCTTGTGAATTCAAACGGTGCTAATGTTAGTGCTCCAAGCATTAGCACTGAGACCGTTGAAGTTTCACAAGGCCTGGGGACATATTATGTGTTAGATCGAGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCGGTCGATGGTTCTAAGTTTAGAAACTTCGCTCTTACGGGAACTAACTCAGTTAGCTTGTCGTGGTTTCAACCACCCTATTTAAGTCAGTTTAATGATGGCATATTTGCGAAGGTGCAGAACCTTAAGACAAGTACGCCATCAGGTGCAACTGCATATTTTCCTACTATAGTTATAGGTAGTTTGTTTGGCTATACTTCCTATACCGTTGTAATAGAGCCATATAATGGTGTTATAATGGCCTCAGTGTGCCAGTATACCATTTGTCAGTTACCTTACACTGATTGTAAGCCTAACACTAATGGTAATAAGCTTATAGGGTTTTGGCACACGGATGTAAAACCCCCAATTTGTGTGTTAAAGCGAAATTTCACGCTTAATGTTAATGCTGATGCATTTTATTTTCATTTTTACCAACATGGTGGTACTTTTTATGCGTACTATGCGGATAAACCCTCCGCTACTACGTTTTTGTTTAGTGTATATATTGGCGATATTTTAACACAGTATTATGTGTTACCTTTCATCTGCAACCCAACAGCTGGTAGCACTTTTGCTCCGCGCTATTGGGTTACACCTTTGGTTAAGCGCCAATATTTGTTTAATTTCAACCAGAAGGGTGTCATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAATGTAAGACCCAGAGCATGTTACCTAGCACTGGTGTCTATGAGTTATCCGGTTATACGGTCCAACCAGTTGGAGTTGTATACCGGCGTGTTGCTAACCTCCCAGCTTGTAATATAGAGGAGTGGCTTACTGCTAGGTCAGTCCCCAGCCCTCTCAACTGGGAGCGTAAGACTTTTCAGAATTGTAATTTTAATTTAAGCAGCCTGTTACGTTATGTTCAGGCTGAGAGTTTGTTTTGTAATAATATGGATGCTTCCAAAGTGTATGGCAGGTGCTTTGGTAGTATTTCAGTTGATAAGTTTGCTGTACCCCGAAGTAGGCAAGTTGATTTACAGCTTGGTAACTCTGGATTTCTGCAGACTGCTAATTATAAGATTGATACAGCTGCCACTTCGTGTCAGCTGCATTACACCTTGCCTAAGAATAATGTCACCATAAACAACCATAACCCCTCGTCTTGGAATAGGAGGTATGGCTTTAATGATGCTGGCGTCTTTGGCAAAAACCAACATGACGTTGTTTACGCTCAGCAATGTTTTACTGTAAGATCTAGTTATTGCCCGTGTGCTCAACCGGACATAGTTAGCCCTTGCACTACTCAGACTAAGCCTAAGTCTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTAATGTGGGTGACCATTGTGAAGGCTTAGGTGTTTTAGAAGATAATTGTGGCAATGCTGATCCACATAAGGGTTGTATCTGTGCCAACAATTCATTTATTGGATGGTCACATGATACCTGCCTTGTTAATGATCGCTGCCAAATTTTTGCTAATATATTGTTAAATGGCATTAATAGTGGTACCACATGTTCCACAGATTTGCAGTTGCCTAATACTGAAGTGGTTACTGGCATTTGTGTCAAATATGACCTCTACGGTATTACTGGACAAGGTGTTTTTAAAGAGGTTAAGGCTGACTATTATAATAGCTGGCAAACCCTTCTGTATGATGTTAATGGTAATTTGAATGGTTTTCGTGATCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATTTCATAAAGATGCACCCGAACCGGCTCTAATCTATCGTAATATAAATTGTAGCTATGTTTTTAGCAATAATATTTCCCGTGAGGAGAACCCACTTAATTACTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGTGATCTCCGTATGGGTAGTGGGCTTTGTGTCAACTATTCAACGTCTCACCGCGCTCGCAGCTCTGTCAGCACGGGTTATAAATTAACTACTTTTGAACCATTTACAGTCCGCATTGTCAATGATAGTGTTGAGTCTGTTGATGGGTTATATGAGCTGCAAATACCAACCAACTTTACTATAGCTAGCCATCAGGAGTTCGTTCAAACGAGGTCTCCAAAGGTTACTATAGACTGTGCTGCATTTGTCTGTGGTGGCCACACAGCATGCCGTCAGCAGTTGGTTGAGTACGGCTCATTCTGTGATAATATTAATGCCATTCTTGGCGAGGTAAATAACCTCATAGATACTATGCAACTTCAAGTTGCAAGTGCTTTAATCCAAGGTGTCACGTTAAGCTCACGCTTATCGGATGGCATTGGTGGTCAAATAGATGATATTAATTTTAGTCCTCTGCTTGGTTGTTTAGGTTCTGACTGTGGCGAA------GTTACCATGGCAGCTCAAACCGGACGATCTGCTATAGAGGATGTATTATTTGACAAAGTCAAACTCTCTGATGTTGGCTTTGTCGAAGCATATAACAATTGCACTGGAGGCCAAGAAGTTAGAGACCTACTTTGTGTGCAATCTTTTAATGGCATCAAAGTGCTACCGCCTGTGTTGTCTGAGAATCAAATTTCTGGTTATACAGCGGGAGCTACTGTATCTGCTATGTTC---CCATGGTCTGCAGCTGCAGGTGTGCCATTTTCTTTAAGTGTTCAATATAGAATTAATGGTCTTGGTGTCACTATGAATGTTCTTAGTGAAAATCAGAAAATGATAGCAAGTGCATTTAACAACGCGATAGGTGCTATACAGGAAGGGTTTGCTGCAACCAATTCTGCCTTAGCAAAAATGCAGTTCGTTGTCAATGCAAATGCGGAAGCACTCAATAATTTATTAAACCAGCTTTCCAATAGGTTTGGTGCAATTAGTGCTTCTTTACAAGAAATTCTATCTCGCCTAGATGCTCTTGAAGCGCAGGCTCAGATAGACCGTCTTATTAATGGCAGATTAACTGCACTTAATGCATATGTCTCTAAGCAGCTGAGTGACATGACCCTTGTTAAGGTGAGTGCAGCCCAGGCTATAGAGAAAGTTAATGAGTGTGTTAAAAGCCAATCATCTAGGATAAATTTCTGTGGCAATGGCAATCATATATTGTCATTAGTCCAGAATGCGCCTTATGGTTTATATTTTATTCATTTCAGCTATGTGCCTACTTCCTTTACAACGGCAAATGTGAGTCCTGGGCTATGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAGTGGAAGTTCACAGGTAGTAATTATTATTACCCTGAACCCATTACAGATAAAAATAGTGTCGTGATGAGTAGTTGCGCAGCAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCTACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAAAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAATTAAACGTTACCCTCCTGGACCTGACTGATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGTTACATCAACCTCAAGGACGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTGTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTTTTCATATGTTGCTGCACGGGTTGTGGCTCATGTTGTTTCAAGAAGTGTGGAAATTGTTGTGATGAGTGTGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT >RA59_R13_NA_ACN89689_1_2006_01_01_USA_Mouse_Murine_coronavirus ATGCTGTTCGTG---TTTATTCTATTTTTGCCCTCTTGCCTAGGGTATATTGGTGATTTTAGATGTATCCAGCTTGTGAATTCAAACGGTGCTAATGTTAGTGCTCCAAGCATTAGCACTGAGACCGTTGAAGTTTCACAAGGCCTGGGGACATATTATGTGTTAGATCGAGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCGGTCGATGGTTCTAAGTTTAGAAACCTCGCTCTTACGGGAACTAACTCAGTTAGCTTGTCGTGGTTTCAACCACCCTATTTAAGTCAGTTTAATGATGGCATATTTGCGAAGGTGCAGAACCTTAAGACAAGTACGCCATCAGGTGCAACTGCATATTTTCCTACTATAGTTATAGGTAGTTTGTTTGGCTATACTTCCTATACCGTTGTAATAGAGCCATATAATGGTGTTATAATGGCCTCAGTGTGCCAGTATACCATTTGTCAGTTACCTTACACTGATTGTAAGCCTAACACTAATGGTAATAAATTAATAGGGTTTTGGCACACGGATGTAAAACCCCCAATTTGTGTGTTAAAGCGAAATTTCACGCTTAATGTTAATGCTGATGCATTTTATTTTCATTTTTACCAACATGGTGGTACTTTTTATGCGTACTATGCGGATAAACCCTCCGCTACTACGTTTTTGTTTAGTGTATATATTGGCGATATTTTAACACAGTATTATGTGTTACCTTTCATCTGCAACCCAACAGCTGGTAGCACTTTTGCTCCGCGCTATTGGGTTACACCTTTGGTTAAGCGCCAATATTTGTTTAATTTCAACCAGAAGGGTGTCATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAATGTAAGACCCAGAGCATGTTACCTAGCACTGGTGTCTATGAGTTATCCGGTTATACGGTCCAACCAGTTGGAGTTGTATACCGGCGTGTTGCTAACCTCCCAGCTTGTAATATAGAGGAGTGGCTTACTGCTAGGTCAGTCCCCTCCCCTCTCAACTGGGAGCGTAAGACTTTTCAGAATTGTAATTTTAATTTAAGCAGCCTGTTACGTTATGTTCAGGCTGAGAGTTTGTTTTGTAATAATATCGATGCTTCCAAAGTGTATGGCAGGTGCTTTGGTAGTATTTCAGTTGATAAGTTTGCTGTACCCCGAAGTAGGCAAGTTGATTTACAGCTTGGTAACTCTGGATTTCTGCAGACTGCTAATTATAAGATTGATACAGCTGCCACTTCGTGTCAGCTGCATTACACCTTGCCTAAGAATAATGTCACCATAAACAACCATAACCCCTCGTCTTGGAATAGGAGGTATGGCTTTAATGATGCTGGCGTCTTTGGCAAAAACCAACATGACGTTGTTTACGCTCAGCAATGTTTTACTGTAAGATCTAGTTATTGCCCGTGTGCTCAACCGGACATAGTTAGCCCTTGCACTACTCAGACTAAGCCTAAGTCTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTAATGTGGGTGACCATTGTGAAGGCTTAGGTGTTTTAGAAGATAATTGTGGCAATGCTGATCCACATAAGGGTTGTATCTGTGCCAACAATTCATTTATTGGATGGTCACATGATACCTGCCTTGTTAATGATCGCTGCCAAATTTTTGCTAATATATTGTTAAATGGCATTAATAGTGGTACCACATGTTCCACAGATTTGCAGTTGCCTAATACTGAAGTGGTTACTGGCATTTGTGTCAAATATGACCTCTACGGTATTACTGGACAAGGTGTTTTTAAAGAGGTTAAGGCTGACTATTATAATAGCTGGCAAACCCTTCTGTATGATGTTAATGGTAATTTGAATGGTTTTCGTGATCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATTTCATAAAGATGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGCTATGTTTTTAGCAATAATATTTCCCGTGAGGAGAACCCACTTAATTACTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGTGATCTCCGTATGGGTGCTGGCTTATGCGTTGATTATTCAAAATCACGCAGGGCTCACCGATCAGTTTCTACTGGCTATCGGTTAACTACATTTGAGCCATACACTCCGATGTTAGTTAATGATAGTGTCCAATCCGTTGATGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGGCACCATGAGGAGTTCATTCAAACTAGATCTCCAAAGGTGACTATAGATTGTGCTGCATTTGTCTGTGGTGATAACACTGCATGCAGGCAGCAGTTGGTTGAGTATGGCTCTTTCTGTGTTAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAACTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGCTCGAGACTGCCAGACGGCATCTCAGGCCCTATAGATGACATTAATTTTAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCAATCCGAGGGCGTTCTGCTATAGAGGATTTGTTATTTGACAAGGTCAAATTATCTGATGTTGGCTTTGTCGAGGCTTATAATAATTGCACCGGTGGTCAAGAAGTTCGTGACCTCCTTTGTGTACAATCTTTTAATGGCATCAAAGTATTACCTCCTGTGTTGTCAGAGAGTCAGATCTCTGGCTACACAACCGGTGCTACTGCGGCAGCTATGTTCCCACCGTGGTCAGCAGCTGCCGGTGTGCCATTTAGTTTAAGTGTTCAATATAGAATTAATGGTTTAGGTGTCACTATGAATGTGCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAATGCGCTGGGTGCTATCCAGGATGGGTTTGATGCAACCAATTCTGCTTTAGGTAAGATCCAGTCCGTTGTTAATGCAAATGCTGAAGCACTCAATAACTTACTAAATCAACTTTCTAACAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACTCGGCTTGAGGCTGTAGAAGCAAAAGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTTAGTGATAGTACGCTTATTAAAGTTAGTGCTGCTCAGGCCATAGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACCACGCGTATTAATTTCTGTGGCAATGGTAATCATATATTATCTCTTGTCCAGAATGCGCCTTATGGCTTATATTTTATACACTTCAGCTATGTGCCAATATCCTTTACAACCGCAAATGTGAGTCCTGGACTTTGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAATGGAAGTTCACAGGCAGTTCATATTACTACCCTGAACCCATTACAGATAAAAACAGTGTCATTATGAGTAGTTGCGCAGTAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCCACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAGTTAAATGTTACTTTGCTGGACCTGACGTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTCTTTATATGTTGCTGCACAGGTTGTGGCTCATGTTGTTTTAAGAAGTGTGGAAATTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT >SA59_RJHM_NA_ACN89723_1_NA_USA_Mouse_Murine_coronavirus ATGCTGTTCGTC---TTTATTTTACTATTACCCTCTTGCCTAGGGTATATTGGTGATTTTAGATGTATCCAGCTTGTGAATTCAAACGGTGCTAATGTTAGTGCTCCAAGCATTAGCACTGAGACCGTTGAAGTTTCACAAGGCCTGGGGACATATTATGTGTTAGATCGAGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCGGTCGATGGTTCTAAGTTTAGAAACCTCGCTCTTACGGGAACTAACTCAGTTAGCTTGTCGTGGTTTCAACCACCCTATTTAAGTCAGTTTAATGATGGCATATTTGCGAAGGTGCAGAACCTTAAGACAAGTACGCCATCAGGTGCAACTGCATATTTTCCTACTATAGTTATAGGTAGTTTGTTTGGCTATACTTCCTATACCGTTGTAATAGAGCCATATAATGGTGTTATAATGGCCTCAGTGTGCCAGTATACCATTTGTCAGTTACCTTACACTGATTGTAAGCCTAACACTAATGGTAATAAATTAATAGGGTTTTGGCACACGGATGTAAAACCCCCAATTTGTGTGTTAAAGCGAAATTTCACGCTTAATGTTAATGCTGATGCATTTTATTTTCATTTTTACCAACATGGTGGTACTTTTTATGCGTACTATGCGGATAAACCCTCCGCTACTACGTTTTTGTTTAGTGTATATATTGGCGATATTTTAACACAGTATTATGTGTTACCTTTCATCTGCAACCCAACAGCTGGTAGCACTTTTGCTCCGCGCTATTGGGTTACACCTTTGGTTAAGCGCCAATATTTGTTTAATTTCAACCAGAAGGGTGTCATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAATGTAAGACCCAGAGCATGTTACCTAGCACTGGTGTCTATGAGTTATCCGGTTATACGGTCCAACCAGTTGGAGTTGTATACCGGCGTGTTGCTAACCTCCCAGCTTGTAATATAGAGGAGTGGCTTACTGCTAGGTCAGTCCCCTCCCCTCTCAACTGGGAGCGTAAGACTTTTCAGAATTGTAATTTTAATTTAAGCAGCCTGTTACGTTATGTTCAGGCTGAGAGTTTGTTTTGTAATAATATCGATGCTTCCAAAGTGTATGGCAGGTGCTTTGGTAGTATTTCAGTTGATAAGTTTGCTGTACCCCGAAGTAGGCAAGTTGATTTACAGCTTGGTAACTCTGGATTTCTGCAGACTGCTAATTATAAGATTGATACAGCTGCCACTTCGTGTCAGCTGCATTACACCTTGCCTAAGAATAATGTCACCATAAACAACCATAACCCCTCGTCTTGGAATAGGAGGTATGGCTTTAATGATGCTGGCGTCTTTGGCAAAAACCAACATGACGTTGTTTACGCTCAGCAATGTTTTACTGTAAGATCTAGTTATTGCCCGTGTGCTCAACCGGACATAGTTAGCCCTTGCACTACTCAGACTAAGCCTAAGTCTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTAATGTGGGTGACCATTGTGAAGGCTTAGGTGTTTTAGAAGATAATTGTGGCAATGCTGATCCACATAAGGGTTGTATCTGTGCCAACAATTCATTTATTGGATGGTCACATGATACCTGCCTTGTTAATGATCGCTGCCAAATTTTTGCTAATATATTGTTAAATGGCATTAATAGTGGTACCACATGTTCCACAGATTTGCAGTTGCCTAATACTGAAGTGGTTACTGGCATTTGTGTCAAATATGACCTCTACGGTATTACTGGACAAGGTGTTTTTAAAGAGGTTAAGGCTGACTATTATAATAGCTGGCAAACCCTTCTGTATGATGTTAATGGTAATTTGAATGGTTTTCGTGATCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATTTCATAAAGATGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGCTATGTTTTTAGCAATAATATTTCCCGTGAGGAGAACCCACTTAATTACTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGTGATCTCCGTATGGGTGCTGGCTTATGCGTTGATTATTCAAAATCACGCAGGGCTCACCGATCAGTTTCTACTGGCTATCGGTTAACTACATTTGAGCCATACACTCCGATGTTAGTTAATGATAGTGTCCAATCCGTTGATGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGGCACCATGAGGAGTTCATTCAAACTAGATCTCCAAAGGTGACTATAGATTGTGCTGCATTTGTCTGTGGTGATAACACTGCATGCAGGCAGCAGTTGGTTGAGTATGGCTCTTTCTGTGTTAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAACTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGCTCGAGACTGCCAGACGGCATCTCAGGCCCTATAGATGACATTAATTTTAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCAATCCGAGGGCGTTCTGCTATAGAGGATTTGTTATTTGACAAGGTCAAATTATCTGATGTTGGCTTTGTCGAGGCTTATAATAATTGCACCGGTGGTCAAGAAGTTCGTGACCTCCTTTGTGTACAATCTTTTAATGGCATCAAAGTATTACCTCCTGTGTTGTCAGAGAGTCAGATCTCTGGCTACACAACCGGTGCTACTGCGGCAGCTATGTTCCCACCGTGGTCAGCAGCTGCCGGTGTGCCATTTAGTTTAAGTGTTCAATATAGAATTAATGGTTTAGGTGTCACTATGAATGTGCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAATGCGCTGGGTGCTATCCAGGATGGGTTTGATGCAACCAATTCTGCTTTAGGTAAGATCCAGTCCGTTGTTAATGCAAATGCTGAAGCACTCAATAACTTACTAAATCAACTTTCTAACAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACTCGGCTTGAGGCTGTAGAAGCAAAAGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTTAGTGATAGTACGCTTATTAAAGTTAGTGCTGCTCAGGCCATAGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACCACGCGTATTAATTTCTGTGGCAATGGTAATCATATATTATCTCTTGTCCAGAATGCGCCTTATGGCTTATATTTTATACACTTCAGCTATGTGCCAATATCCTTTACAACCGCAAATGTGAGTCCTGGACTTTGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAATGGAAGTTCACAGGCAGTTCATATTACTACCCTGAACCCATTACAGATAAAAACAGTGTCATTATGAGTAGTTGCGCAGTAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCCACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAGTTAAATGTTACTTTGCTGGACCTGACGTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTCTTTATATGTTGCTGCACAGGTTGTGGCTCATGTTGTTTTAAGAAGTGTGGAAATTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT >inf_MHV_A59_NA_ACN89760_1_NA_USA_Mouse_Murine_coronavirus ATGCTGTTCGTG---TTTATTCTATTTTTGCCCTCTTGTTTAGGGTATATTGGTGATTTTAGATGTATCCAGCTTGTGAATTCAAACGGTGCTAATGTTAGTGCTCCAAGCATTAGCACTGAGACCGTTGAAGTTTCACAAGGCCTGGGGACATATTATGTGTTAGATCGAGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCGGTCGATGGTTCTAAGTTTAGAAACCTCGCTCTTACGGGAACTAACTCAGTTAGCTTGTCGTGGTTTCAACCACCCTATTTAAGTCAGTTTAATGATGGCATATTTGCGAAGGTGCAGAACCTTAAGACAAGTACGCCATCAGGTGCAACTGCATATTTTCCTACTATAGTTATAGGTAGTTTGTTTGGCTATACTTCCTATACCGTTGTAATAGAGCCATATAATGGTGTTATAATGGCCTCAGTGTGCCAGTATACCATTTGTCAGTTACCTTACACTGATTGTAAGCCTAACACTAATGGTAATAAATTAATAGGGTTTTGGCACACGGATGTAAAACCCCCAATTTGTGTGTTAAAGCGAAATTTCACGCTTAATGTTAATGCTGATGCATTTTATTTTCATTTTTACCAACATGGTGGTACTTTTTATGCGTACTATGCGGATAAACCCTCCGCTACTACGTTTTTGTTTAGTGTATATATTGGCGATATTTTAACACAGTATTATGTGTTACCTTTCATCTGCAACCCAACAGCTGGTAGCACTTTTGCTCCGCGCTATTGGGTTACACCTTTGGTTAAGCGCCAATATTTGTTTAATTTCAACCAGAAGGGTGTCATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAATGTAAGACCCAGAGCATGTTACCTAGCACTGGTGTCTATGAGTTATCCGGTTATACGGTCCAACCAGTTGGAGTTGTATACCGGCGTGTTGCTAACCTCCCAGCTTGTAATATAGAGGAGTGGCTTACTGCTAGGTCAGTCCCCTCCCCTCTCAACTGGGAGCGTAAGACTTTTCAGAATTGTAATTTTAATTTAAGCAGCCTGTTACGTTATGTTCAGGCTGAGAGTTTGTTTTGTAATAATATCGATGCTTCCAAAGTGTATGGCAGGTGCTTTGGTAGTATTTCAGTTGATAAGTTTGCTGTACCCCGAAGTAGGCAAGTTGATTTACAGCTTGGTAACTCTGGATTTCTGCAGACTGCTAATTATAAGATTGATACAGCTGCCACTTCGTGTCAGCTGCATTACACCTTGCCTAAGAATAATGTCACCATAAACAACCATAACCCCTCGTCTTGGAATAGGAGGTATGGCTTTAATGATGCTGGCGTCTTTGGCAAAAACCAACATGACGTTGTTTACGCTCAGCAATGTTTTACTGTAAGATCTAGTTATTGCCCGTGTGCTCAACCGGACATAGTTAGCCCTTGCACTACTCAGACTAAGCCTAAGTCTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTAATGTGGGTGACCATTGTGAAGGCTTAGGTGTTTTAGAAGATAATTGTGGCAATGCTGATCCACATAAGGGTTGTATCTGTGCCAACAATTCATTTATTGGATGGTCACATGATACCTGCCTTGTTAATGATCGCTGCCAAATTTTTGCTAATATATTGTTAAATGGCATTAATAGTGGTACCACATGTTCCACAGATTTGCAGTTGCCTAATACTGAAGTGGTTACTGGCATTTGTGTCAAATATGACCTCTACGGTATTACTGGACAAGGTGTTTTTAAAGAGGTTAAGGCTGACTATTATAATAGCTGGCAAACCCTTCTGTATGATGTTAATGGTAATTTGAATGGTTTTCGTGATCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATTTCATAAAGATGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGCTATGTTTTTAGCAATAATATTTCCCGTGAGGAGAACCCACTTAATTACTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGTGATCTCCGTATGGGTGCTGGCTTATGCGTTGATTATTCAAAATCACGCAGGGCTCACCGATCAGTTTCTACTGGCTATCGGTTAACTACATTTGAGCCATACACTCCGATGTTAGTTAATGATAGTGTCCAATCCGTTGATGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGGCACCATGAGGAGTTCATTCAAACTAGATCTCCAAAGGTGACTATAGATTGTGCTGCATTTGTCTGTGGTGATAACACTGCATGCAGGCAGCAGTTGGTTGAGTATGGCTCTTTCTGTGTTAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAACTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGCTCGAGACTGCCAGACGGCATCTCAGGCCCTATAGATGACATTAATTTTAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCAATCCGAGGGCGTTCTGCTATAGAGGATTTGTTATTTGACAAGGTCAAATTATCTGATGTTGGCTTTGTCGAGGCTTATAATAATTGCACCGGTGGTCAAGAAGTTCGTGACCTCCTTTGTGTACAATCTTTTAATGGCATCAAAGTATTACCTCCTGTGTTGTCAGAGAGTCAGATCTCTGGCTACACAACCGGTGCTACTGCGGCAGCTATGTTCCCACCGTGGTCAGCAGCTGCCGGTGTGCCATTTAGTTTAAGTGTTCAATATAGAATTAATGGTTTAGGTGTCACTATGAATGTGCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAATGCGCTGGGTGCTATCCAGGATGGGTTTGATGCAACCAATTCTGCTTTAGGTAAGATCCAGTCCGTTGTTAATGCAAATGCTGAAGCACTCAATAACTTACTAAATCAACTTTCTAACAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACTCGGCTTGAGGCTGTAGAAGCAAAAGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTTAGTGATAGTACGCTTATTAAAGTTAGTGCTGCTCAGGCCATAGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACCACGCGTATTAATTTCTGTGGCAATGGTAATCATATATTATCTCTTGTCCAGAATGCGCCTTATGGCTTATATTTTATACACTTCAGCTATGTGCCAATATCCTTTACAACCGCAAATGTGAGTCCTGGACTTTGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAATGGAAGTTCACAGGCAGTTCATATTACTACCCTGAACCCATTACAGATAAAAACAGTGTCATTATGAGTAGTTGCGCAGTAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCCACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAGTTAAATGTTACTTTGCTGGACCTGACGTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTCTTTATATGTTGCTGCACAGGTTGTGGCTCATGTTGTTTTAAGAAGTGTGGAAATTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT >repJHM_RA59_NA_ACN89777_1_NA_USA_Mouse_Murine_coronavirus ATGCTGTTCGTG---TTTATTCTATTTTTGCCCTCTTGCCTAGGGTATATTGGTGATTTTAGATGTATCCAGCTTGTGAATTCAAACGGTGCTAATGTTAGTGCTCCAAGCATTAGCACTGAGACCGTTGAAGTTTCACAAGGCCTGGGGACATATTATGTGTTAGATCGAGTTTATTTAAATGCCACATTATTGCTTACTGGTTACTACCCGGTCGATGGTTCTAAGTTTAGAAACCTCGCTCTTACGGGAACTAACTCAGTTAGCTTGTCGTGGTTTCAACCACCCTATTTAAGTCAGTTTAATGATGGCATATTTGCGAAGGTGCAGAACCTTAAGACAAGTACGCCATCAGGTGCAACTGCATATTTTCCTACTATAGTTATAGGTAGTTTGTTTGGCTATACTTCCTATACCGTTGTAATAGAGCCATATAATGGTGTTATAATGGCCTCAGTGTGCCAGTATACCATTTGTCAGTTACCTTACACTGATTGTAAGCCTAACACTAATGGTAATAAATTAATAGGGTTTTGGCACACGGATGTAAAACCCCCAATTTGTGTGTTAAAGCGAAATTTCACGCTTAATGTTAATGCTGATGCATTTTATTTTCATTTTTACCAACATGGTGGTACTTTTTATGCGTACTATGCGGATAAACCCTCCGCTACTACGTTTTTGTTTAGTGTATATATTGGCGATATTTTAACACAGTATTATGTGTTACCTTTCATCTGCAACCCAACAGCTGGTAGCACTTTTGCTCCGCGCTATTGGGTTACACCTTTGGTTAAGCGCCAATATTTGTTTAATTTCAACCAGAAGGGTGTCATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGTGAAATAAAATGTAAGACCCAGAGCATGTTACCTAGCACTGGTGTCTATGAGTTATCCGGTTATACGGTCCAACCAGTTGGAGTTGTATACCGGCGTGTTGCTAACCTCCCAGCTTGTAATATAGAGGAGTGGCTTACTGCTAGGTCAGTCCCCTCCCCTCTCAACTGGGAGCGTAAGACTTTTCAGAATTGTAATTTTAATTTAAGCAGCCTGTTACGTTATGTTCAGGCTGAGAGTTTGTTTTGTAATAATATCGATGCTTCCAAAGTGTATGGCAGGTGCTTTGGTAGTATTTCAGTTGATAAGTTTGCTGTACCCCGAAGTAGGCAAGTTGATTTACAGCTTGGTAACTCTGGATTTCTGCAGACTGCTAATTATAAGATTGATACAGCTGCCACTTCGTGTCAGCTGCATTACACCTTGCCTAAGAATAATGTCACCATAAACAACCATAACCCCTCGTCTTGGAATAGGAGGTATGGCTTTAATGATGCTGGCGTCTTTGGCAAAAACCAACATGACGTTGTTTACGCTCAGCAATGTTTTACTGTAAGATCTAGTTATTGCCCGTGTGCTCAACCGGACATAGTTAGCCCTTGCACTACTCAGACTAAGCCTAAGTCTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTAATGTGGGTGACCATTGTGAAGGCTTAGGTGTTTTAGAAGATAATTGTGGCAATGCTGATCCACATAAGGGTTGTATCTGTGCCAACAATTCATTTATTGGATGGTCACATGATACCTGCCTTGTTAATGATCGCTGCCAAATTTTTGCTAATATATTGTTAAATGGCATTAATAGTGGTACCACATGTTCCACAGATTTGCAGTTGCCTAATACTGAAGTGGTTACTGGCATTTGTGTCAAATATGACCTCTACGGTATTACTGGACAAGGTGTTTTTAAAGAGGTTAAGGCTGACTATTATAATAGCTGGCAAACCCTTCTGTATGATGTTAATGGTAATTTGAATGGTTTTCGTGATCTTACCACTAACAAGACTTATACGATAAGGAGCTGTTATAGTGGCCGTGTTTCTGCTGCATTTCATAAAGATGCACCCGAACCGGCTCTGCTCTATCGTAATATAAATTGTAGCTATGTTTTTAGCAATAATATTTCCCGTGAGGAGAACCCACTTAATTACTTTGATAGTTATTTGGGTTGTGTTGTTAATGCTGATAACCGCACGGATGAGGCGCTTCCTAATTGTGATCTCCGTATGGGTGCTGGCTTATGCGTTGATTATTCAAAATCACGCAGGGCTCACCGATCAGTTTCTACTGGCTATCGGTTAACTACATTTGAGCCATACACTCCGATGTTAGTTAATGATAGTGTCCAATCCGTTGATGGATTATATGAGATGCAAATACCAACCAATTTTACTATTGGGCACCATGAGGAGTTCATTCAAACTAGATCTCCAAAGGTGACTATAGATTGTGCTGCATTTGTCTGTGGTGATAACACTGCATGCAGGCAGCAGTTGGTTGAGTATGGCTCTTTCTGTGTTAATGTTAATGCCATTCTTAATGAGGTTAATAACCTCTTGGATAATATGCAACTACAAGTTGCTAGTGCATTAATGCAGGGTGTTACTATAAGCTCGAGACTGCCAGACGGCATCTCAGGCCCTATAGATGACATTAATTTTAGTCCTCTACTTGGATGCATAGGTTCAACATGTGCTGAAGACGGCAATGGACCTAGTGCAATCCGAGGGCGTTCTGCTATAGAGGATTTGTTATTTGACAAGGTCAAATTATCTGATGTTGGCTTTGTCGAGGCTTATAATAATTGCACCGGTGGTCAAGAAGTTCGTGACCTCCTTTGTGTACAATCTTTTAATGGCATCAAAGTATTACCTCCTGTGTTGTCAGAGAGTCAGATCTCTGGCTACACAACCGGTGCTACTGCGGCAGCTATGTTCCCACCGTGGTCAGCAGCTGCCGGTGTGCCATTTAGTTTAAGTGTTCAATATAGAATTAATGGTTTAGGTGTCACTATGAATGTGCTTAGTGAGAACCAAAAGATGATTGCTAGTGCTTTTAACAATGCGCTGGGTGCTATCCAGGATGGGTTTGATGCAACCAATTCTGCTTTAGGTAAGATCCAGTCCGTTGTTAATGCAAATGCTGAAGCACTCAATAACTTACTAAATCAACTTTCTAACAGGTTTGGTGCTATTAGTGCTTCTTTACAAGAAATTCTAACTCGGCTTGAGGCTGTAGAAGCAAAAGCCCAGATAGATCGTCTTATTAATGGCAGGTTAACTGCACTTAATGCGTATATATCCAAGCAACTTAGTGATAGTACGCTTATTAAAGTTAGTGCTGCTCAGGCCATAGAAAAGGTCAATGAGTGCGTTAAGAGCCAAACCACGCGTATTAATTTCTGTGGCAATGGTAATCATATATTATCTCTTGTCCAGAATGCGCCTTATGGCTTATATTTTATACACTTCAGCTATGTGCCAATATCCTTTACAACCGCAAATGTGAGTCCTGGACTTTGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAATGGAAGTTCACAGGCAGTTCATATTACTACCCTGAACCCATTACAGATAAAAACAGTGTCATTATGAGTAGTTGCGCAGTAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCCACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAGAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAGTTAAATGTTACTTTGCTGGACCTGACGTATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGCTACATCAACCTCAAGGAAGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTTTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTCTTTATATGTTGCTGCACAGGTTGTGGCTCATGTTGTTTTAAGAAGTGTGGAAATTGTTGTGATGAGTATGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGAT
>681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus MLFV-FLTLLPSCLGYIGDFRCINRVNTSISNARAPCVSTEVVDVSKGLG TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALMGTNTLSLNWFEPPFLSE FNDGIYAKVKNLKASLPIGSASYFPTIIIGSNFVNTSYTVVLEPYNGIIM ASICQYTICQLPHTDCKPNTGGNTLIGFWHTDLRAPVCILKRNFTFNVNA EWLYFHFYQQGGTFYAYYADVSSATTFLFSSYIGAVLTQYFVLPYMCSPT TSGVSSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLAANTVPSPLNWERK TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNSR RVDLQLGKSGLLQSFNYKIDTRATSCQLYYSLAQDNVTVINHNPSSWNRR YGFNDVATFHSGKHDVAYAEACFTVGASYCPCAKPSTVYSCVTG-KPKSA NCPTGTSNRECNVQASGFKS----------KCDCTCNPSPLTTYDPRCLQ ARSTLGVGDHCEGLGILEDKCGGSNI---CNCSADAFVGWAMDSCLSNGR CHIFSNLMLNGINSGTTCSTDFQLPNTEVVTGVCVKYDLYGITGQGVFKE VKADYYNSWQNLLYDVNGNLNGFRDSVTNKTYLLRSCYSGRVSAAYHQDA PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVINADNSTEQSVDA CDLRMGSGLCVNYSIAHRARRSVSTGYKLTTFEPFTVSIVNDSVESVGGL YEMQIPTNFTIASHQEFIQTRSPKVTIDCAAFVCGDYTACRQQLVDYGSF CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLADGISGQIDDINFS PLLGCLGSDCSE---GTKAAQGRSAIEDVLFDKVKLSDVGFVESYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV PFALSVQYRINGLGVTMNVLSENQKMIASSFNNAIGAIQEGFDATNSALA KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL INGRLTALNAYVSKQLSDMTLIKVSAAQAIEKVNECVKSQSPRINFCGNG NHILSLVQNAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF VQDHGEWKFTGSNYYYPESIIDKNSVVMSSCAVNYTKAPEVFLNTSITNL PDFKEELDKWFKNQTSIVPDLSFDIGKLNVTFLDLSYEMNRIQDAIKNLN ESYINLKEIGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDEYGGRQAGIVIHNISSHED >A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA -------------------------------------------------- ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDEYGGHQDSIVIHNISSHED >MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus MLFVVFILLIPSCLGYIGDFRCIQLVNSNGNNASAPSISIETVDVSKGLG TYYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTLSLNWYKPPFLSE FNDGIFAKVKNLKASLPAGSSAYFPTIIIGSGFGNTAYTIVMEPYNGIIM ASICQYTICQLPYTDCKPNTGGNSIIGFWHTDIKSPVCILKRNFTFNVNA DWLYFHFYQQGGTFYAYYADVASATTFLFSIYIGDVLTQFFVLPFNCEPD KAGVISPQYWVTPLVERQYLFNFNQKGIITSAVDCASSYTAEIKCKTQSM NPSTGVYDLTGYTVQPVGLVYRRVRNLPDCKIEDWLTAKSVPSPLNWERK TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSVSIDKFAIPNRR RVDLQIGNSGFLQSFNYKIDSRATSCQLYYSLAQNNVTVNNHNPSSWNRR YGFNDVATFGSGKHDVAYAEECFTVGNDYCPCANPSIVSPCTQD-KPKAA NCPVGTRNRECNPLALGGNL---------FKCDCTCNPSPLTTYDLRCLQ ARSMLGVGDHCEGLGVLEDKCGGSNV---CNCTADAFVGWSTDSCLSKGR CHIFSNLLLNGINSGTTCSTDLQLPNTEVVTGVCVKYHLFGITGQGVFKE VKADYYHSWQNLLYDVNGNLEGFRDIITNKTYTIRSCYSGRVSAAYHQDA PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVAV CDLRMGSGLCVNYSTSHRARRSISTGYKLTTFEPFTVSIVNDSVQSVGGL YEMQIPINFTIGQHQEFIQTRAPKVTIDCAAFVCGDYTACRQQLVEYGSF CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLADGIGGQIDDINFS PLLGCLGSDCGE--GTTAALKGRSVIEDMLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFDATNSALA KIQSVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAQAQIDRL INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSPRINFCGNG NHILSLVQSAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF VQDNGEWKFTGSGYYYPEPINDKNSVVMSSCAVNYTKAPEVFLNTSIPNL PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQESIKKLN ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDEYGGHQDSIVIHNISSHED >MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus MLFV-FLTLLPSSLGYIGDFRCIQLVNTDTSNASAPSVSTEVVDVSKGIG TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALTGINTISLNWYKPPFLSE FNDGIFAKVKNLKASLPKDSISYFPTIIIGSNFVTTSYTVVLEPYNGIIM ASICQYTICQLPYTDCKPNTGGNKLIGFWHTELKSPVCILKRNFTFNVNA EWLYFHFYQQGGTFYAYYADVSSATTFLFSMYIGDVLTQYFVLPYMCTLT TTGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLTAKSVPSPLNWERK TFQNCNFDLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNRR RVDLQLGNSGFLQSFNYKIDTRATSCQLYYSLAKNNVTVNNHNPSSWNRR YGFNDVATFGTGKHDVAYAEACFTVGASYCPCANPSIVSPCTTG-KPNFA NCPTGTSNRECTVMPLANNQ---------FKCDCTCNPSPLTTYDLRCLQ ARSMLGVGDHCEGLGVLEDKCGGSNT---CNCSAHAFVGWAKDSCLANGR CHIFSNLMLNGINSGTTCSMDLQLPNTEVVTGVCVKYDLYGITGQGIFKE VKADYYHSWQNLLYDVNGNLIGFRDFVANKSYTIRSCYSGRVSAAYHQDA PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVDA CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDECGGHQDSIVIHNISSHED >MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus MLFV-FLLLLPSCLGYIGDFRCINLVNTDMSNASAPSVSTETVDVSKGLG TYYVLDRVYLNATLLLTGYYPVDGSNYRNLALTGTNTISLTWFKPPFLSE FNDGIFAKVKNLKANTPKGATSYFPTIVIGSLFGHTSYTVVLEPYNNIIM ASVCTYTICLLPYTDCKANTNGNRLIGFWHTDVKPPTCLLKRNFTFDVNA DWLYFHFYQQGGTFYAYYANVSSATTFLFSIYIGDVLTQYFVLPYICTPS TTGVLSPQYWVTPLVKRQYLFNFNQKGVITGAVDCASSYTSEIKCKTQSL LPSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERR TFQNCNFNLSSLLRYVQAESLSCNNIDASKVYGMCFGGISVDKFAIPRSR QIDLQIGNSGFLQTANYKIDTAVTSCQLYYSLPKNNVTINNYNPSSWNRR YGFNDAGVFGKNQHDVAYAQQCFTVRSSYCPCAQPDIVSPCTARTKPMSA YCPVGTTHRECSRSGPHLRSGGHRARVGTYTCECTCKPNPLDTYDLRCGQ IKTIVNVGDHCEGLGVLEDQCGNSDPHKGCVCANASFIGWSHDTCLVNDR CQIFANILLNGINSGTTCSTDLQLPNTEVVTGVCVRYDLYGITGQGVFKE VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHSDA PEPALLYRNINCGFVFNNNISREENPLTYFDSYLGCVVNADNHTDQALPN CDLRMGAGLCVDYSKSRRARRSVSTGYRLTTFEPYTPMLVNDSVQAIDGM YDMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNSVCRQQLVEYGSF CENVNSILNEVNNLLDNMQLQVASALMQGVTVSSRLPDGIAGPIDDINFS PLLGCIGSTCSESENGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALA KLQSVVNANAEALNNLLGQLSNRFGAISASLQEILSRLDALEAQVQVDRL ISGRLTALNAYVSKQLSDSTLIKFSAAQAIEKVNECVKSQTMRINFCGSG NHILSLVQNAPYGLYFIHFSYVPTSFTTARVSPGLCIAGDRGLAPKAGYF VQDNGEWKFTGSGYYYPEPITDKNSVVMSSCAVNYTKAPEVFLNTSIPNL SDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQDAIKKLN ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGLCC FKKCGNCCDEYGGHQDSIVIHNISSHED >MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA -------------------------------------------------- ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDEYGGHQDSIVIHNISSHED >MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA -------------------------------------------------- ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP PDFKEVLDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDEYGGHQDSIVIHNISSHED >MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA -------------------------------------------------- ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDEYGGHQDSIVIHNISSHED >MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA -------------------------------------------------- ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDEYGGHQDSIVIHNISSHED >MHV_MI_S_BAJ04696_1_1994_Australia_Mouse_Murine_coronavirus MLFVVFILLLPSCLGYIGDFRCIQTVNSNGNNASAPSISTEVVDVSKGLG TYYVLDRVYLNATLLLTGYYPVDGSSYRNLALTGTNTVSLAWFKPPFLSE FNDGIFAKVKNLKANTPNGAISFFPTIVMGSLFGNTSYTVVLEPYNNIIM ASVCMYTICQLPYTDCKSNTNGNKIIGFWHTDVKPPTCLLKRNFTFDVNA EWLYFHFYQQGGTFYAYYANVSSATTFLFSIYIGDVLTQYFVLPYICTPM SSGVLSPQYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSL SPSTGVYDLSGYTVQPVGVVYRRVPNLPDCKIEEWLTAKSVPSPLNWERR TFQNCNFNLSSLLRYVQAESLSCTNIDASKVYGMCFGSVSVDKFAIPRSR QIDLQIGNSGFLQTANYKIDTAVTSCQLYYSLSKNNVTINNHNPSSWNRR YGFNDAGVFGKKQHDVAYAQQCFTVRPNYCPCAQPDIVSPCTAATKPSSA YCPTGTVHRECSVWSGPHMRSARVGIPGTYTCECTCAPNPLETYDLRCGQ IKTIVNVGDHCEGLGVLEDKCGNADPHKGCVCANDSFVGWSHDTCLVNDR CQIFANILLNGINSGTTCSTDLQLPNTEVVTGVCVRYDLYGITGQGVFKE AKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAYHSDA SEPALLYRNINCSFVFNNNISREENPLTYFDSYLGCVVNADNHTEQALPN CDLRMGAGLCVDYSKARRARRSVSTGYRLTTFEPYTPMLVNDSVQAIDGM YEMQIPTNFTIGHHEEFIQIRAPKVTIDCAAFVCGDNSVCRQQLVEYGSF CENVNAILNEVNNLLDNMQLQVASALMQGVTVSSSLPDGIAGPIDDINFS PLLGCIGSTCSESENGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALA KIQSVVNANAEALNNLLGQLSNRFGAISASLQEILSRLDALEAQVQVDRL INGRLTALNAYVSKQLSDSTLIKFSAAHAIEKVNECVKSQTMRINFCGSG NHILSLVQNAPYGLYFIHFSYVPTSFTTARVSPGLCIAGDRGLAPKAGYF VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAVNYTKAPEVFLNTSIPNL PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTFLDLTDEMNRIQDAINKLN ESYINLKEVGTYEMYVKWPWYIWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGSCCDEYGGHQDSIVIHNISSHEG >ML_11_orf3_AAF68923_1_NA_NA_Unknown_Murine_coronavirus MLFV-FLTLLPSSLGYIGDFRCIQLVNTDTSNASAPSVSTEVVDVSKGIG TYYVLDRVYLNATLLLTGYYPVDGSMYRNMALTGINTISLNWYKPPFLSE FNDGIFAKVKNLKASLPKDSISYFPTIIIGSNFVTTSYTVVLEPYNGIIM ASICQYTICQLPYTDCKPNTGGNKLIGFWHTELKSPVCILKRNFTFNVNA EWLYFHFYQQGGTFYAYYADVSSATTFLFSMYIGDVLTQYFVLPYMCTLT TTGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLTAKSVPSPLNWERK TFQNCNFDLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNRR RVDLQLGNSGFLQSFNYKIDTRATSCQLYYSLAKNNVTVNNHNPSSWNRR YGFNDVATFGTGKHDVAYAEACFTVGASYCPCANPSIVSPCTTG-KPNFA NCPTGTSNRECTVMPLANNQ---------FKCDCTCNPSPLTTYDLRCLQ ARSMLGVGDHCEGLGVLEDKCGGSNT---CNCSAHAFVGWAKDSCLANGR CHIFSNLMLNGINSGTTCSMDLQLPNTEVVTGVCVKYDLYGITGQGIFKE VKADYYHSWQNLLYDVNGNLIGFRDFVANKSYTIRSCYSGRVSAAYHQDA PEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVDA CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDECGGHQDSIVIHNISSHED >Parker_S_YP_003029848_1_NA_NA_Rat_Murine_coronavirus MLFV-FLTLLPSCLGYIGDFRCINRVNTSISNARAPSVSTEVVDVSKGLG TYYVLDRVYLNATLLLTGYYPVHGSMYRNMALMGTNTLSLNWFEPPFLSE FNDGIYAKVKNLKASLPIGSASYFPTIIIGSNFVNTSYTVVLEPYNGIIM ASICQYTICQLPHTYCKPNTGGNTLIGFWHTDLRSPVCILTRNFTFNVNA EWLYFHFYQQGGTFYAYYADVSSATTFLFSSYIGAVLTQYFVLPYMCNPT TSGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSM NPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLAANTVPSPLNWERK TFQNCNFNLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNSR RVDLQLGKSGLLQSFNYKISTRATSCQLYYSLAQNNVTVINHNPSSWNRR YGFNDVATFGSGIHDVAYAEACFTVGASYCPCAKPSIVYSCVTG-KPKSA NCPTGTSHRECNVQASGFKH----------KCDCTCNPSPLTTYDPRCLQ ARSMLGVGDHCEGLGILEDKCGGSNI---CNCSADAFVGWAKDSCLSNDR CHIFSNLMLNGINSGTTCSTDLQLPNTEVVTGVCVKYDLYGITGQGVFKE VKADYYNSWQNLLYDVNGNLNGFRDIVTNKTYLLRSCYSGRVSAAYHQDA PEPALLYRNLKCDYVFNNNISREETPLNYFDNYLGCVVNADNSTEHSVDA CDLRMGSGLCVNYSTAHRARRSVSTGYKLTTFEPFTVSIVNDSVESVGGL YEMQIPTNFTIASQQEFIQTRSPKVTIDCAAFVCGDYTVCRQQLVDYGSF CDNINAILGEVNNLIDTMQLQVASALIQGVTLNSRLADGISGQIDDINFS PLLGCLGSYCSE---GTMAVQGRSAIEDVLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATASAMFPPWSAAAGV PFALSVQYRINGLGVTMNVLSENQKMIASSFNNAIGAIQEGFDATNSALA KIQSVVNSNAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL INGRLTALNAYVSKHLSDMTLIKVSAAQAIEKVNECVKSQSPRINFCGNG NHILSLVQNAPYGLYFIHFSYVPTSFTTVNVSPGLCISGDRGLAPKAGYF VQDHGEWKFTGSNYYYPESITDKNSVVMSSCAVNYTKAPEVFLNTSITNL PDFKEELDKWFKNQTSIVPDLSFDIGKLNVTFLDLSYEMNRIQDAIKNLN ESYINLKEIGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDEYGGRQAGIVIHNISSHED >Penn_97_1_ORF3_AAF69334_1_NA_NA_Unknown_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG TYYVLDRVYLNATLLLTGYYPVDGSKFRNFALTGTNSVSLSWFQPPYLSQ FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK TFQNCNFNLSSLLRYVQAESLFCNNMDASKVYGRCFGSISVDKFAVPRSR QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA -------------------------------------------------- ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA PEPALIYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN CDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGL YELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSF CDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFS PLLGCLGSDCGE--VTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMF-PWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALA KMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRL INGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNG NHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYF VQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNL PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLN ESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDECGGHQDSIVIHNISSHED >RA59_R13_NA_ACN89689_1_2006_01_01_USA_Mouse_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA -------------------------------------------------- ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDEYGGHQDSIVIHNISSHED >SA59_RJHM_NA_ACN89723_1_NA_USA_Mouse_Murine_coronavirus MLFV-FILLLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA -------------------------------------------------- ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDEYGGHQDSIVIHNISSHED >inf_MHV_A59_NA_ACN89760_1_NA_USA_Mouse_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA -------------------------------------------------- ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDEYGGHQDSIVIHNISSHED >repJHM_RA59_NA_ACN89777_1_NA_USA_Mouse_Murine_coronavirus MLFV-FILFLPSCLGYIGDFRCIQLVNSNGANVSAPSISTETVEVSQGLG TYYVLDRVYLNATLLLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQ FNDGIFAKVQNLKTSTPSGATAYFPTIVIGSLFGYTSYTVVIEPYNGVIM ASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNA DAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPT AGSTFAPRYWVTPLVKRQYLFNFNQKGVITSAVDCASSYTSEIKCKTQSM LPSTGVYELSGYTVQPVGVVYRRVANLPACNIEEWLTARSVPSPLNWERK TFQNCNFNLSSLLRYVQAESLFCNNIDASKVYGRCFGSISVDKFAVPRSR QVDLQLGNSGFLQTANYKIDTAATSCQLHYTLPKNNVTINNHNPSSWNRR YGFNDAGVFGKNQHDVVYAQQCFTVRSSYCPCAQPDIVSPCTTQTKPKSA -------------------------------------------------- ---FVNVGDHCEGLGVLEDNCGNADPHKGCICANNSFIGWSHDTCLVNDR CQIFANILLNGINSGTTCSTDLQLPNTEVVTGICVKYDLYGITGQGVFKE VKADYYNSWQTLLYDVNGNLNGFRDLTTNKTYTIRSCYSGRVSAAFHKDA PEPALLYRNINCSYVFSNNISREENPLNYFDSYLGCVVNADNRTDEALPN CDLRMGAGLCVDYSKSRRAHRSVSTGYRLTTFEPYTPMLVNDSVQSVDGL YEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSF CVNVNAILNEVNNLLDNMQLQVASALMQGVTISSRLPDGISGPIDDINFS PLLGCIGSTCAEDGNGPSAIRGRSAIEDLLFDKVKLSDVGFVEAYNNCTG GQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWSAAAGV PFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALG KIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRL INGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNG NHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISGDRGLAPKAGYF VQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNP PDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTYEMNRIQDAIKKLN ESYINLKEVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCC FKKCGNCCDEYGGHQDSIVIHNISSHED
Reading sequence file /data//pss_subsets/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/fasta/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1
Found 17 sequences of length 4134
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 11.9%
Found 1102 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0% 17.3% 33.0% 47.1% 59.4% 70.2% 79.3% 86.7% 92.5% 96.7% 99.2%100.0%100.0%
Using a window size of 80 with k as 21
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 858 polymorphic sites
**p-Value(s)**
----------
NSS: 0.00e+00 (1000 permutations)
Max Chi^2: 0.00e+00 (1000 permutations)
PHI (Permutation): 0.00e+00 (1000 permutations)
PHI (Normal): 0.00e+00
#NEXUS
[ID: 9044270117]
begin taxa;
dimensions ntax=17;
taxlabels
681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus
MHV_MI_S_BAJ04696_1_1994_Australia_Mouse_Murine_coronavirus
ML_11_orf3_AAF68923_1_NA_NA_Unknown_Murine_coronavirus
Parker_S_YP_003029848_1_NA_NA_Rat_Murine_coronavirus
Penn_97_1_ORF3_AAF69334_1_NA_NA_Unknown_Murine_coronavirus
RA59_R13_NA_ACN89689_1_2006_01_01_USA_Mouse_Murine_coronavirus
SA59_RJHM_NA_ACN89723_1_NA_USA_Mouse_Murine_coronavirus
inf_MHV_A59_NA_ACN89760_1_NA_USA_Mouse_Murine_coronavirus
repJHM_RA59_NA_ACN89777_1_NA_USA_Mouse_Murine_coronavirus
A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus
MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus
MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus
MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus
MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus
MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus
MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus
MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus
;
end;
begin trees;
translate
1 681_NA_AFG25750_1_NA_NA_Rat_Murine_coronavirus,
2 MHV_MI_S_BAJ04696_1_1994_Australia_Mouse_Murine_coronavirus,
3 ML_11_orf3_AAF68923_1_NA_NA_Unknown_Murine_coronavirus,
4 Parker_S_YP_003029848_1_NA_NA_Rat_Murine_coronavirus,
5 Penn_97_1_ORF3_AAF69334_1_NA_NA_Unknown_Murine_coronavirus,
6 RA59_R13_NA_ACN89689_1_2006_01_01_USA_Mouse_Murine_coronavirus,
7 SA59_RJHM_NA_ACN89723_1_NA_USA_Mouse_Murine_coronavirus,
8 inf_MHV_A59_NA_ACN89760_1_NA_USA_Mouse_Murine_coronavirus,
9 repJHM_RA59_NA_ACN89777_1_NA_USA_Mouse_Murine_coronavirus,
10 A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus,
11 MHV_1_NA_ACN89742_1_NA_USA_Mouse_Murine_coronavirus,
12 MHV_2_NA_AAF19386_1_NA_NA_Unknown_Murine_coronavirus,
13 MHV_3_NA_ACN89743_1_NA_USA_Mouse_Murine_coronavirus,
14 MHV_BHKR_lab_USA_icA59_17Cl1_2012_S_AGT17727_1_2012_10_25_USA_Mouse_Murine_coronavirus,
15 MHV_BHKR_lab_USA_icA59_ns2M_2012_S_AGT17749_1_2012_10_25_USA_Mouse_Murine_coronavirus,
16 MHV_BHKR_lab_USA_icA59_L94P_2012_S_AGT17738_1_2012_10_25_USA_Mouse_Murine_coronavirus,
17 MHV_BHKR_lab_USA_infA59_H126A_2012_S_AGT17716_1_2012_10_25_USA_Mouse_Murine_coronavirus
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:1.069202e-02,4:1.343770e-02,(((((2:7.045077e-02,13:5.714669e-02)1.000:1.919787e-01,((6:2.427004e-04,7:1.978583e-03,9:2.438809e-04,14:2.415727e-04,15:5.657153e-04,16:2.421927e-04)0.941:8.976870e-04,8:2.396554e-04,10:2.401198e-04,17:2.372984e-04)1.000:2.266630e-02)1.000:1.028957e-01,5:5.186560e-04)1.000:2.426343e-01,(3:5.303790e-04,12:2.294343e-04)1.000:2.733125e-02)1.000:5.102690e-02,11:2.065489e-01)1.000:7.958271e-02);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:1.069202e-02,4:1.343770e-02,(((((2:7.045077e-02,13:5.714669e-02):1.919787e-01,((6:2.427004e-04,7:1.978583e-03,9:2.438809e-04,14:2.415727e-04,15:5.657153e-04,16:2.421927e-04):8.976870e-04,8:2.396554e-04,10:2.401198e-04,17:2.372984e-04):2.266630e-02):1.028957e-01,5:5.186560e-04):2.426343e-01,(3:5.303790e-04,12:2.294343e-04):2.733125e-02):5.102690e-02,11:2.065489e-01):7.958271e-02);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -15571.10 -15598.31
2 -15571.38 -15596.57
--------------------------------------
TOTAL -15571.23 -15597.78
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.090827 0.001757 1.012343 1.176116 1.089734 989.02 1113.31 1.001
r(A<->C){all} 0.103327 0.000099 0.082622 0.121730 0.103066 891.68 971.08 1.000
r(A<->G){all} 0.242266 0.000201 0.215695 0.271192 0.242080 796.70 874.71 1.000
r(A<->T){all} 0.098081 0.000054 0.084104 0.112617 0.098015 855.04 1011.40 1.000
r(C<->G){all} 0.097609 0.000110 0.076370 0.117394 0.097388 894.56 900.75 1.003
r(C<->T){all} 0.383838 0.000270 0.353583 0.416466 0.383375 720.36 729.61 1.004
r(G<->T){all} 0.074878 0.000049 0.061372 0.088897 0.074648 920.87 936.25 1.000
pi(A){all} 0.270152 0.000038 0.258140 0.282535 0.270304 880.00 939.35 1.000
pi(C){all} 0.188353 0.000027 0.177999 0.198071 0.188436 757.56 938.75 1.000
pi(G){all} 0.211911 0.000033 0.200834 0.223135 0.211806 835.23 896.75 1.000
pi(T){all} 0.329585 0.000042 0.317325 0.342110 0.329685 860.01 959.89 1.000
alpha{1,2} 0.236396 0.000297 0.202015 0.268031 0.235597 941.85 1046.96 1.000
alpha{3} 7.182201 3.631339 3.936879 10.918100 6.945162 1264.42 1319.31 1.000
pinvar{all} 0.294658 0.000565 0.244762 0.338321 0.295349 1193.34 1238.51 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\ ***************** TYPES OF STANDARD ANALYSES ***************** (1) Selection Analyses (2) Evolutionary Hypothesis Testing (3) Relative evolutionary rate inference (4) Coevolutionary analysis (5) Basic Analyses (6) Codon Selection Analyses (7) Compartmentalization (8) Data File Tools (9) Miscellaneous (10) Model Comparison (11) Kernel Analysis Tools (12) Molecular Clock (13) Phylogeny Reconstruction (14) Positive Selection (15) Recombination (16) Selection/Recombination (17) Relative Rate (18) Relative Ratio (19) Substitution Rates Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' ***************** (1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution). (2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood). (3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting). (4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection). (5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification). (6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood). (7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation). Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types): Analysis Description -------------------- Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a coding sequence alignment to determine whether some sites have been subject to pervasive purifying or diversifying selection. v2.1 introduces two more methods for estimating the posterior distribution of grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation Bayes approximation (fastest). Please note that a FUBAR analysis generates a cache and a results JSON file in the same directory as directory as the original alignment. HyPhy needs to have write privileges to this directory. For example if the original file is in /home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there will also exist FUBAR-generated files /home/sergei/FUBAR/data/pol.nex.FUBAR.json, /home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide checkpointing so that a partially completed analysis can be restarted. - __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree (one per partition) - __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring selection (2013), Mol Biol Evol. 30(5):1196-205 - __Written by__: Sergei L Kosakovsky Pond - __Contact Information__: spond@temple.edu - __Analysis Version__: 2.1 ####Choose Genetic Code 1. [**Universal**] Universal code. (Genebank transl_table=1). 2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2). 3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3). 4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4). 5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5). 6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6). 7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9). 8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10). 9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12). 10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13). 11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14). 12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15). 13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16). 14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21). 15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22). 16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23). 17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24). 18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25). 19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26). >Please choose an option (or press q to cancel selection): >Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`) >A tree was found in the data file: `(C1,C12,(((((C10,C5),((C14,C15,C17,C6,C7,C8),C16,C2,C9)),C13),(C11,C4)),C3))` >Would you like to use it (y/n)? >Loaded a multiple sequence alignment with **17** sequences, **1378** codons, and **1** partitions from `/data//pss_subsets/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/results/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1.fna` > FUBAR will write cache and result files to _/data//pss_subsets/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/results/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/results/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1/A59_S_YP_009824982_1_NA_USA_Unknown_Murine_coronavirus.result.1.fna.FUBAR.json_, respectively > Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer): ####Posterior estimation method 1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation) 2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed) 3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default) >Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5): ### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model * Log(L) = -16304.70, AIC-c = 32675.44 (33 estimated parameters) * Tree length (expected substitutions/site) for partition 1 : 0.611 ### Computing the phylogenetic likelihood function on the grid * Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid * Best scaling achieved for * synonymous rate = 2.815 * non-synonymous rate = 0.429 * Computing conditional site likelihoods on a 20 x 20 rate grid ### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights * Using the following settings * Dirichlet alpha : 0.5 ### Tabulating site-level results | Codon | Partition | alpha | beta |Posterior prob for positive selection| |:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:| | 118 | 1 | 1.777 | 15.296 | Pos. posterior = 0.9090 | | 514 | 1 | 1.602 | 12.638 | Pos. posterior = 0.9119 | | 518 | 1 | 4.160 | 28.305 | Pos. posterior = 0.9154 | ---- ## FUBAR inferred 3 sites subject to diversifying positive selection at posterior probability >= 0.9 Of these, 0.26 are expected to be false positives (95% confidence interval of 0-1 )
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
