--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1532.72 -1558.23
2 -1532.53 -1563.14
--------------------------------------
TOTAL -1532.62 -1562.45
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.082739 0.000170 0.058873 0.108173 0.081693 1366.45 1430.87 1.001
r(A<->C){all} 0.138947 0.002694 0.049481 0.244073 0.133626 467.40 499.87 1.000
r(A<->G){all} 0.206684 0.003643 0.100408 0.328648 0.203263 412.69 440.44 1.001
r(A<->T){all} 0.021244 0.000259 0.000112 0.052659 0.017624 736.04 764.58 1.000
r(C<->G){all} 0.022645 0.000482 0.000028 0.066081 0.016052 588.27 622.46 1.001
r(C<->T){all} 0.522248 0.004724 0.388374 0.658400 0.523663 566.60 630.99 1.000
r(G<->T){all} 0.088232 0.000960 0.033792 0.150853 0.084717 507.55 643.64 1.000
pi(A){all} 0.199486 0.000191 0.171021 0.224560 0.199188 847.72 1037.71 1.001
pi(C){all} 0.181248 0.000167 0.156598 0.205652 0.181102 1171.41 1249.97 1.000
pi(G){all} 0.214315 0.000188 0.187417 0.241479 0.214298 968.45 1047.88 1.000
pi(T){all} 0.404951 0.000270 0.373708 0.437977 0.405219 1027.49 1097.17 1.001
alpha{1,2} 0.389585 0.365892 0.000105 1.494356 0.185571 624.66 800.82 1.000
alpha{3} 1.839187 1.473654 0.181159 4.345382 1.560764 1070.84 1219.18 1.000
pinvar{all} 0.325976 0.030697 0.000069 0.602949 0.331244 793.16 803.23 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
-- Starting log on Thu Nov 17 16:37:14 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result--
-- Starting log on Thu Nov 17 16:45:33 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result--
-- Starting log on Thu Nov 17 16:37:14 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result--
-- Starting log on Fri Nov 18 02:32:57 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result/gapped_alignment/fubar,LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 90 taxa and 840 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C14
Taxon 2 -> C65
Taxon 3 -> C598
Taxon 4 -> C287
Taxon 5 -> C189
Taxon 6 -> C195
Taxon 7 -> C325
Taxon 8 -> C71
Taxon 9 -> C589
Taxon 10 -> C203
Taxon 11 -> C207
Taxon 12 -> C599
Taxon 13 -> C331
Taxon 14 -> C565
Taxon 15 -> C381
Taxon 16 -> C224
Taxon 17 -> C211
Taxon 18 -> C338
Taxon 19 -> C81
Taxon 20 -> C68
Taxon 21 -> C63
Taxon 22 -> C504
Taxon 23 -> C543
Taxon 24 -> C223
Taxon 25 -> C344
Taxon 26 -> C87
Taxon 27 -> C206
Taxon 28 -> C123
Taxon 29 -> C528
Taxon 30 -> C235
Taxon 31 -> C350
Taxon 32 -> C93
Taxon 33 -> C31
Taxon 34 -> C571
Taxon 35 -> C183
Taxon 36 -> C552
Taxon 37 -> C247
Taxon 38 -> C356
Taxon 39 -> C99
Taxon 40 -> C482
Taxon 41 -> C243
Taxon 42 -> C576
Taxon 43 -> C259
Taxon 44 -> C362
Taxon 45 -> C60
Taxon 46 -> C105
Taxon 47 -> C620
Taxon 48 -> C303
Taxon 49 -> C600
Taxon 50 -> C271
Taxon 51 -> C368
Taxon 52 -> C111
Taxon 53 -> C159
Taxon 54 -> C619
Taxon 55 -> C624
Taxon 56 -> C369
Taxon 57 -> C283
Taxon 58 -> C374
Taxon 59 -> C117
Taxon 60 -> C52
Taxon 61 -> C32
Taxon 62 -> C313
Taxon 63 -> C551
Taxon 64 -> C380
Taxon 65 -> C34
Taxon 66 -> C27
Taxon 67 -> C641
Taxon 68 -> C141
Taxon 69 -> C417
Taxon 70 -> C347
Taxon 71 -> C4
Taxon 72 -> C385
Taxon 73 -> C129
Taxon 74 -> C291
Taxon 75 -> C483
Taxon 76 -> C377
Taxon 77 -> C583
Taxon 78 -> C559
Taxon 79 -> C391
Taxon 80 -> C135
Taxon 81 -> C441
Taxon 82 -> C549
Taxon 83 -> C407
Taxon 84 -> C595
Taxon 85 -> C397
Taxon 86 -> C70
Taxon 87 -> C591
Taxon 88 -> C615
Taxon 89 -> C575
Taxon 90 -> C437
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668738779
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1046891241
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 1971224789
Seed = 1269026875
Swapseed = 1668738779
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 27 unique site patterns
Division 2 has 20 unique site patterns
Division 3 has 58 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -4087.428258 -- 149.597508
Chain 2 -- -4121.720487 -- 149.597508
Chain 3 -- -4143.098023 -- 149.597508
Chain 4 -- -4121.935517 -- 149.597508
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -4134.657454 -- 149.597508
Chain 2 -- -4129.796608 -- 149.597508
Chain 3 -- -4150.688088 -- 149.597508
Chain 4 -- -4150.187493 -- 149.597508
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-4087.428] (-4121.720) (-4143.098) (-4121.936) * [-4134.657] (-4129.797) (-4150.688) (-4150.187)
1000 -- (-2905.806) (-2815.377) (-3018.146) [-2743.943] * [-2680.193] (-2802.212) (-3014.424) (-2720.530) -- 0:49:57
2000 -- (-2663.543) (-2577.507) (-2576.717) [-2471.782] * (-2535.715) [-2540.563] (-2557.203) (-2608.731) -- 0:58:13
3000 -- (-2379.399) (-2407.766) (-2529.446) [-2382.619] * (-2429.527) [-2423.852] (-2463.838) (-2548.190) -- 1:00:55
4000 -- (-2280.519) (-2348.800) (-2358.357) [-2308.203] * [-2289.744] (-2380.245) (-2386.440) (-2504.879) -- 0:58:06
5000 -- [-2248.325] (-2314.594) (-2286.689) (-2290.292) * [-2251.527] (-2345.801) (-2366.653) (-2479.256) -- 0:59:42
Average standard deviation of split frequencies: 0.087971
6000 -- (-2224.093) [-2219.007] (-2275.741) (-2292.040) * [-2229.725] (-2271.827) (-2345.200) (-2432.920) -- 1:00:44
7000 -- (-2225.507) [-2204.547] (-2227.526) (-2259.982) * [-2196.486] (-2251.543) (-2295.603) (-2379.151) -- 0:59:06
8000 -- [-2200.615] (-2219.854) (-2223.049) (-2231.471) * [-2177.334] (-2224.674) (-2282.654) (-2368.621) -- 0:59:56
9000 -- [-2174.231] (-2193.805) (-2219.334) (-2240.784) * [-2174.324] (-2218.667) (-2268.697) (-2355.938) -- 1:00:33
10000 -- (-2184.569) [-2190.068] (-2245.327) (-2215.619) * [-2163.464] (-2218.971) (-2246.278) (-2348.527) -- 0:59:24
Average standard deviation of split frequencies: 0.107867
11000 -- (-2178.521) [-2172.181] (-2230.870) (-2209.666) * [-2157.671] (-2209.921) (-2227.661) (-2344.949) -- 0:59:56
12000 -- (-2194.195) [-2150.278] (-2240.130) (-2201.566) * [-2151.714] (-2216.978) (-2234.744) (-2334.607) -- 0:59:00
13000 -- (-2213.862) [-2126.423] (-2213.527) (-2191.735) * [-2135.798] (-2230.765) (-2220.036) (-2345.814) -- 0:59:28
14000 -- (-2185.691) [-2132.450] (-2229.156) (-2170.526) * [-2136.467] (-2230.504) (-2214.242) (-2356.406) -- 0:59:51
15000 -- (-2177.738) [-2131.566] (-2226.392) (-2155.341) * [-2152.625] (-2212.588) (-2184.711) (-2346.314) -- 0:59:06
Average standard deviation of split frequencies: 0.114419
16000 -- (-2172.824) [-2136.230] (-2200.605) (-2171.200) * [-2142.992] (-2218.753) (-2186.031) (-2345.740) -- 0:59:27
17000 -- (-2178.503) (-2139.580) (-2223.148) [-2160.825] * [-2155.229] (-2173.873) (-2190.235) (-2336.814) -- 0:59:45
18000 -- (-2161.114) [-2134.322] (-2206.038) (-2158.128) * [-2148.703] (-2171.842) (-2183.020) (-2333.745) -- 0:59:06
19000 -- (-2173.644) (-2130.884) (-2188.727) [-2156.231] * [-2148.400] (-2171.298) (-2180.956) (-2330.209) -- 0:59:22
20000 -- (-2149.567) [-2124.224] (-2209.055) (-2166.804) * [-2143.238] (-2157.543) (-2191.820) (-2327.292) -- 0:58:48
Average standard deviation of split frequencies: 0.122121
21000 -- [-2147.638] (-2132.428) (-2181.505) (-2193.752) * (-2142.735) [-2150.525] (-2196.665) (-2326.509) -- 0:59:03
22000 -- [-2151.750] (-2144.155) (-2170.744) (-2190.983) * [-2136.043] (-2152.714) (-2174.863) (-2319.592) -- 0:58:31
23000 -- [-2138.553] (-2129.855) (-2191.574) (-2200.589) * [-2144.413] (-2171.954) (-2188.200) (-2319.201) -- 0:57:20
24000 -- (-2132.753) [-2117.617] (-2153.003) (-2190.853) * (-2149.795) [-2153.930] (-2164.253) (-2299.877) -- 0:56:56
25000 -- (-2148.785) [-2119.410] (-2163.178) (-2201.505) * (-2167.029) [-2138.402] (-2183.515) (-2313.731) -- 0:55:54
Average standard deviation of split frequencies: 0.088571
26000 -- (-2134.436) [-2135.460] (-2166.035) (-2209.249) * (-2162.273) [-2132.247] (-2187.408) (-2313.468) -- 0:55:34
27000 -- [-2129.385] (-2140.840) (-2143.630) (-2206.972) * (-2144.434) [-2141.608] (-2203.018) (-2341.069) -- 0:54:39
28000 -- (-2143.887) [-2129.293] (-2148.071) (-2167.510) * [-2135.040] (-2154.692) (-2205.982) (-2324.975) -- 0:54:23
29000 -- (-2133.835) [-2117.452] (-2148.960) (-2194.065) * [-2136.792] (-2160.003) (-2198.045) (-2333.651) -- 0:54:07
30000 -- [-2134.998] (-2121.240) (-2160.579) (-2184.750) * (-2139.161) [-2155.789] (-2163.138) (-2314.360) -- 0:53:21
Average standard deviation of split frequencies: 0.094427
31000 -- [-2146.448] (-2123.525) (-2157.697) (-2233.699) * [-2149.908] (-2160.136) (-2185.587) (-2321.255) -- 0:53:08
32000 -- (-2177.344) [-2119.526] (-2148.075) (-2183.220) * [-2146.842] (-2147.610) (-2175.572) (-2318.536) -- 0:52:26
33000 -- (-2223.078) (-2136.559) [-2136.145] (-2192.095) * [-2135.387] (-2147.409) (-2179.018) (-2326.284) -- 0:52:15
34000 -- (-2189.875) [-2133.440] (-2147.568) (-2193.569) * [-2148.495] (-2151.801) (-2194.391) (-2321.561) -- 0:51:36
35000 -- (-2201.253) [-2148.613] (-2143.668) (-2188.714) * (-2156.290) [-2133.869] (-2179.838) (-2324.210) -- 0:51:28
Average standard deviation of split frequencies: 0.087633
36000 -- (-2196.282) (-2152.007) [-2127.242] (-2169.439) * (-2140.653) [-2119.993] (-2175.846) (-2325.793) -- 0:51:19
37000 -- (-2195.956) [-2133.061] (-2141.059) (-2159.677) * (-2151.260) [-2138.202] (-2186.473) (-2307.883) -- 0:50:45
38000 -- (-2170.423) [-2134.670] (-2139.694) (-2197.101) * (-2154.345) [-2126.839] (-2195.830) (-2299.211) -- 0:50:37
39000 -- (-2167.412) [-2139.096] (-2143.250) (-2185.850) * (-2163.764) [-2135.969] (-2175.742) (-2318.157) -- 0:50:06
40000 -- (-2176.259) [-2128.075] (-2140.619) (-2179.546) * (-2154.211) [-2141.826] (-2176.696) (-2306.258) -- 0:50:00
Average standard deviation of split frequencies: 0.087309
41000 -- (-2209.674) [-2138.350] (-2156.676) (-2170.280) * (-2163.926) [-2151.751] (-2177.707) (-2310.249) -- 0:49:30
42000 -- (-2207.135) [-2140.101] (-2169.143) (-2164.258) * (-2160.431) [-2151.301] (-2164.925) (-2307.201) -- 0:49:25
43000 -- (-2205.598) [-2131.888] (-2177.411) (-2169.464) * (-2164.367) [-2140.034] (-2173.469) (-2336.670) -- 0:48:57
44000 -- (-2193.160) [-2143.704] (-2162.881) (-2160.625) * (-2172.169) [-2132.455] (-2201.752) (-2336.982) -- 0:48:53
45000 -- (-2197.746) [-2130.259] (-2170.829) (-2156.541) * (-2159.579) [-2130.318] (-2187.301) (-2306.741) -- 0:48:48
Average standard deviation of split frequencies: 0.078443
46000 -- (-2182.723) [-2135.815] (-2166.433) (-2155.469) * (-2141.019) [-2131.586] (-2190.068) (-2299.624) -- 0:48:23
47000 -- (-2198.133) (-2161.587) (-2167.570) [-2158.821] * (-2151.296) [-2129.529] (-2188.601) (-2298.166) -- 0:48:19
48000 -- (-2194.368) [-2152.924] (-2180.417) (-2141.108) * (-2158.369) [-2127.063] (-2184.860) (-2303.200) -- 0:47:55
49000 -- (-2185.256) (-2158.848) (-2191.687) [-2153.795] * [-2141.642] (-2129.610) (-2188.199) (-2315.008) -- 0:47:52
50000 -- (-2199.775) (-2139.971) (-2184.656) [-2136.411] * (-2141.969) [-2128.986] (-2181.126) (-2319.179) -- 0:47:30
Average standard deviation of split frequencies: 0.082186
51000 -- (-2185.062) (-2150.264) (-2210.300) [-2144.026] * [-2138.172] (-2137.443) (-2188.314) (-2325.363) -- 0:47:27
52000 -- (-2194.214) [-2145.410] (-2193.187) (-2147.474) * (-2133.436) [-2133.107] (-2168.087) (-2315.587) -- 0:47:05
53000 -- (-2177.017) [-2138.369] (-2182.872) (-2162.697) * (-2120.331) [-2132.665] (-2175.672) (-2314.055) -- 0:46:45
54000 -- (-2187.757) (-2166.420) (-2198.062) [-2136.286] * (-2135.323) [-2126.558] (-2174.721) (-2306.996) -- 0:46:42
55000 -- (-2194.389) (-2174.206) (-2185.071) [-2130.625] * (-2144.774) [-2121.785] (-2170.675) (-2294.787) -- 0:46:23
Average standard deviation of split frequencies: 0.084179
56000 -- (-2184.582) (-2184.318) (-2180.414) [-2130.307] * (-2153.957) [-2117.277] (-2160.883) (-2318.662) -- 0:46:21
57000 -- (-2154.690) (-2153.832) (-2189.741) [-2137.558] * (-2175.169) [-2108.376] (-2170.021) (-2318.975) -- 0:46:02
58000 -- (-2161.981) (-2154.131) (-2220.941) [-2143.948] * (-2173.370) [-2117.435] (-2177.003) (-2312.791) -- 0:46:01
59000 -- (-2161.325) (-2153.516) (-2230.501) [-2136.927] * (-2172.328) [-2129.873] (-2177.508) (-2307.609) -- 0:45:43
60000 -- (-2150.060) [-2129.634] (-2203.745) (-2156.096) * (-2166.551) [-2128.595] (-2189.843) (-2307.069) -- 0:45:41
Average standard deviation of split frequencies: 0.089889
61000 -- (-2182.415) [-2135.077] (-2191.517) (-2132.375) * (-2158.356) [-2116.779] (-2183.163) (-2292.685) -- 0:45:24
62000 -- (-2199.612) [-2139.406] (-2188.668) (-2152.187) * (-2161.653) [-2123.401] (-2175.057) (-2317.135) -- 0:45:23
63000 -- (-2189.314) [-2136.353] (-2192.300) (-2148.334) * (-2178.417) [-2127.963] (-2186.046) (-2312.733) -- 0:45:06
64000 -- (-2190.698) [-2129.138] (-2184.048) (-2162.132) * (-2171.687) [-2133.341] (-2165.849) (-2322.377) -- 0:45:05
65000 -- (-2207.444) (-2145.238) (-2181.534) [-2149.457] * (-2160.079) [-2135.869] (-2177.516) (-2316.693) -- 0:45:04
Average standard deviation of split frequencies: 0.084981
66000 -- (-2187.930) (-2146.479) (-2201.554) [-2140.652] * (-2152.323) [-2130.414] (-2152.129) (-2307.833) -- 0:44:48
67000 -- (-2216.714) (-2163.359) (-2186.903) [-2143.808] * (-2170.463) [-2123.681] (-2146.477) (-2299.653) -- 0:44:47
68000 -- (-2204.735) (-2185.099) (-2167.204) [-2136.317] * (-2181.278) [-2122.863] (-2164.785) (-2311.724) -- 0:44:46
69000 -- (-2213.667) (-2178.202) (-2155.825) [-2143.605] * (-2181.370) [-2113.147] (-2156.997) (-2313.304) -- 0:44:31
70000 -- (-2223.399) (-2183.478) [-2144.524] (-2147.069) * (-2182.028) [-2126.578] (-2165.431) (-2300.421) -- 0:44:30
Average standard deviation of split frequencies: 0.090260
71000 -- (-2207.835) (-2148.279) (-2153.326) [-2136.504] * (-2197.199) [-2125.807] (-2147.886) (-2296.279) -- 0:44:16
72000 -- (-2180.072) (-2154.031) [-2140.924] (-2151.360) * (-2171.106) (-2129.148) [-2135.157] (-2299.300) -- 0:44:15
73000 -- (-2212.038) (-2148.044) [-2135.907] (-2162.546) * (-2163.074) [-2139.255] (-2148.563) (-2288.659) -- 0:44:01
74000 -- (-2201.140) (-2153.020) [-2139.725] (-2160.336) * (-2157.940) [-2142.018] (-2146.281) (-2287.970) -- 0:44:00
75000 -- (-2209.088) [-2142.558] (-2144.626) (-2163.754) * (-2163.165) (-2133.912) [-2128.595] (-2298.019) -- 0:43:47
Average standard deviation of split frequencies: 0.083670
76000 -- (-2219.426) (-2144.756) [-2148.914] (-2171.408) * (-2134.598) (-2159.287) [-2126.485] (-2280.824) -- 0:43:46
77000 -- (-2192.166) (-2150.853) [-2147.604] (-2191.089) * (-2154.295) [-2140.826] (-2149.735) (-2292.196) -- 0:43:33
78000 -- (-2168.626) [-2142.923] (-2169.837) (-2179.662) * (-2159.262) [-2130.340] (-2142.171) (-2304.230) -- 0:43:32
79000 -- (-2211.054) [-2143.883] (-2143.688) (-2162.072) * (-2155.183) [-2135.030] (-2159.530) (-2294.912) -- 0:43:31
80000 -- (-2196.327) (-2161.062) [-2145.924] (-2176.478) * (-2148.476) [-2131.167] (-2151.170) (-2293.540) -- 0:43:19
Average standard deviation of split frequencies: 0.078095
81000 -- (-2194.757) (-2196.218) [-2156.889] (-2148.191) * (-2152.513) [-2142.736] (-2146.423) (-2311.158) -- 0:43:18
82000 -- (-2199.769) (-2187.900) [-2149.245] (-2154.505) * (-2148.820) [-2141.132] (-2151.048) (-2313.160) -- 0:43:06
83000 -- (-2170.028) (-2187.580) [-2154.392] (-2162.545) * (-2155.946) [-2130.583] (-2153.110) (-2316.774) -- 0:43:05
84000 -- (-2185.887) (-2176.763) [-2146.998] (-2159.544) * (-2160.103) [-2131.024] (-2154.039) (-2322.477) -- 0:42:53
85000 -- (-2170.133) (-2173.427) [-2134.026] (-2143.558) * (-2150.713) [-2129.251] (-2152.300) (-2309.776) -- 0:42:52
Average standard deviation of split frequencies: 0.075245
86000 -- (-2175.865) (-2166.226) [-2136.280] (-2166.750) * (-2146.281) [-2135.571] (-2172.774) (-2321.392) -- 0:42:51
87000 -- (-2186.476) (-2201.099) [-2140.413] (-2150.042) * (-2137.548) [-2130.506] (-2154.895) (-2325.616) -- 0:42:40
88000 -- (-2201.637) (-2165.358) [-2130.358] (-2154.400) * (-2139.094) [-2123.290] (-2144.048) (-2331.749) -- 0:42:39
89000 -- (-2214.879) (-2160.126) (-2134.954) [-2124.629] * (-2155.270) [-2121.472] (-2153.197) (-2329.236) -- 0:42:28
90000 -- (-2188.397) (-2150.116) (-2153.077) [-2124.446] * (-2137.379) [-2124.509] (-2171.560) (-2309.508) -- 0:42:17
Average standard deviation of split frequencies: 0.075142
91000 -- (-2198.199) (-2179.955) (-2133.526) [-2127.530] * [-2139.030] (-2134.137) (-2180.514) (-2298.519) -- 0:42:17
92000 -- (-2192.977) (-2184.786) (-2138.222) [-2135.141] * (-2159.996) [-2130.348] (-2193.002) (-2315.105) -- 0:42:16
93000 -- (-2195.708) (-2201.408) (-2139.015) [-2124.843] * [-2127.389] (-2139.399) (-2173.208) (-2317.053) -- 0:42:05
94000 -- (-2174.133) (-2226.130) [-2133.892] (-2127.109) * (-2145.286) [-2127.630] (-2187.121) (-2326.624) -- 0:42:05
95000 -- (-2186.268) (-2222.992) [-2142.042] (-2150.278) * [-2151.184] (-2150.537) (-2184.711) (-2333.863) -- 0:41:54
Average standard deviation of split frequencies: 0.075331
96000 -- (-2179.039) (-2182.722) [-2131.295] (-2142.965) * [-2129.585] (-2163.369) (-2191.720) (-2317.010) -- 0:41:54
97000 -- (-2189.088) (-2172.706) (-2137.921) [-2130.984] * [-2129.848] (-2171.766) (-2174.593) (-2301.407) -- 0:41:44
98000 -- (-2205.194) (-2184.929) (-2146.258) [-2124.073] * [-2138.714] (-2159.033) (-2192.652) (-2301.542) -- 0:41:43
99000 -- (-2189.108) (-2176.708) (-2134.434) [-2129.210] * (-2142.592) [-2135.368] (-2182.560) (-2302.223) -- 0:41:42
100000 -- (-2177.807) (-2203.707) [-2118.018] (-2121.437) * (-2157.949) (-2149.311) [-2152.998] (-2318.071) -- 0:41:33
Average standard deviation of split frequencies: 0.082463
101000 -- (-2158.414) (-2204.354) (-2135.025) [-2118.390] * [-2138.390] (-2149.486) (-2155.486) (-2306.926) -- 0:41:32
102000 -- (-2162.362) (-2200.028) (-2124.478) [-2119.195] * (-2179.095) (-2156.826) [-2143.308] (-2298.718) -- 0:41:31
103000 -- (-2159.833) (-2199.161) (-2132.706) [-2140.607] * (-2181.556) [-2136.203] (-2161.281) (-2304.327) -- 0:41:39
104000 -- (-2165.167) (-2166.008) [-2124.392] (-2141.506) * (-2179.779) [-2145.770] (-2155.740) (-2311.443) -- 0:41:47
105000 -- (-2208.576) (-2161.430) (-2129.839) [-2135.435] * (-2168.510) (-2147.387) [-2137.572] (-2326.977) -- 0:41:46
Average standard deviation of split frequencies: 0.084389
106000 -- (-2211.617) (-2146.251) (-2154.155) [-2133.329] * (-2150.859) (-2157.363) [-2136.024] (-2319.725) -- 0:41:53
107000 -- (-2202.217) [-2135.966] (-2147.414) (-2156.825) * (-2161.682) (-2181.868) [-2127.443] (-2313.808) -- 0:42:00
108000 -- (-2215.099) [-2134.092] (-2182.928) (-2162.203) * (-2154.655) (-2162.346) [-2117.627] (-2309.667) -- 0:42:07
109000 -- (-2209.627) (-2156.363) (-2158.181) [-2143.057] * (-2148.133) (-2160.695) [-2110.989] (-2296.306) -- 0:42:14
110000 -- (-2190.830) (-2146.083) (-2161.234) [-2126.631] * (-2149.993) (-2172.593) [-2126.129] (-2302.458) -- 0:42:20
Average standard deviation of split frequencies: 0.082717
111000 -- (-2184.333) (-2141.973) (-2161.744) [-2130.673] * (-2161.817) (-2158.729) [-2116.903] (-2315.134) -- 0:42:26
112000 -- (-2194.207) (-2168.869) (-2137.869) [-2135.097] * (-2172.632) (-2160.855) [-2122.278] (-2319.261) -- 0:42:25
113000 -- (-2206.364) (-2151.634) [-2135.937] (-2158.071) * (-2166.169) (-2166.124) [-2113.989] (-2312.529) -- 0:42:31
114000 -- (-2199.758) (-2155.217) [-2121.370] (-2149.567) * (-2172.629) (-2150.090) [-2125.790] (-2304.650) -- 0:42:36
115000 -- (-2194.402) [-2126.045] (-2128.996) (-2141.234) * (-2164.765) (-2147.814) [-2130.156] (-2298.596) -- 0:42:42
Average standard deviation of split frequencies: 0.078413
116000 -- (-2190.402) [-2128.499] (-2145.682) (-2158.977) * (-2174.186) (-2152.295) [-2124.645] (-2304.148) -- 0:42:40
117000 -- (-2201.013) (-2133.542) [-2131.224] (-2149.577) * (-2162.606) (-2156.483) [-2126.466] (-2282.417) -- 0:42:45
118000 -- (-2191.027) [-2133.655] (-2142.361) (-2146.422) * (-2194.892) (-2151.700) [-2131.072] (-2284.652) -- 0:42:51
119000 -- (-2168.841) (-2151.910) [-2120.732] (-2149.647) * (-2171.014) (-2167.524) [-2133.077] (-2306.393) -- 0:42:48
120000 -- (-2181.700) (-2137.769) [-2132.646] (-2194.930) * (-2174.887) (-2162.208) [-2129.207] (-2313.300) -- 0:42:54
Average standard deviation of split frequencies: 0.078042
121000 -- (-2170.948) (-2143.284) [-2146.172] (-2159.181) * (-2182.093) (-2174.728) [-2133.766] (-2300.006) -- 0:42:51
122000 -- (-2185.013) [-2132.038] (-2146.360) (-2148.471) * (-2170.767) [-2138.780] (-2144.805) (-2300.074) -- 0:42:49
123000 -- (-2166.432) [-2135.827] (-2153.130) (-2130.217) * (-2153.907) (-2154.773) [-2130.712] (-2317.262) -- 0:42:46
124000 -- (-2169.108) (-2163.592) (-2162.207) [-2145.478] * (-2153.976) (-2148.433) [-2124.274] (-2330.046) -- 0:42:37
125000 -- (-2163.820) (-2151.061) (-2156.428) [-2146.109] * (-2158.574) (-2169.915) [-2131.813] (-2322.411) -- 0:42:35
Average standard deviation of split frequencies: 0.074660
126000 -- (-2180.531) [-2147.620] (-2156.603) (-2149.478) * (-2150.095) (-2156.053) [-2126.649] (-2319.943) -- 0:42:25
127000 -- (-2196.972) (-2158.174) (-2143.256) [-2144.490] * (-2150.584) (-2167.795) [-2118.606] (-2306.424) -- 0:42:23
128000 -- (-2158.963) (-2170.432) (-2137.140) [-2132.584] * (-2145.348) (-2195.441) [-2133.211] (-2310.374) -- 0:42:14
129000 -- (-2143.596) (-2189.164) [-2140.299] (-2151.302) * (-2134.913) (-2177.155) [-2124.198] (-2290.628) -- 0:42:11
130000 -- (-2175.070) (-2189.356) (-2147.367) [-2133.879] * [-2140.835] (-2174.921) (-2127.297) (-2302.886) -- 0:42:03
Average standard deviation of split frequencies: 0.071593
131000 -- (-2154.262) (-2169.093) (-2140.020) [-2130.629] * (-2154.746) (-2153.807) [-2119.925] (-2294.559) -- 0:42:00
132000 -- (-2157.202) (-2182.214) (-2163.403) [-2126.665] * (-2159.120) (-2160.498) [-2123.389] (-2290.766) -- 0:41:58
133000 -- (-2153.204) (-2182.658) (-2146.453) [-2133.583] * (-2160.342) (-2149.180) [-2118.644] (-2307.096) -- 0:41:49
134000 -- (-2145.418) (-2193.859) (-2162.653) [-2141.057] * (-2141.267) (-2161.705) [-2132.228] (-2302.373) -- 0:41:47
135000 -- [-2134.592] (-2182.772) (-2158.705) (-2136.703) * (-2140.583) (-2159.752) [-2119.594] (-2313.290) -- 0:41:38
Average standard deviation of split frequencies: 0.068862
136000 -- [-2129.047] (-2177.331) (-2151.785) (-2141.958) * (-2163.796) (-2161.319) [-2130.751] (-2325.018) -- 0:41:36
137000 -- [-2130.386] (-2163.961) (-2162.101) (-2146.048) * (-2163.367) (-2154.105) [-2136.894] (-2328.024) -- 0:41:34
138000 -- [-2133.923] (-2209.123) (-2165.948) (-2147.105) * (-2162.503) [-2147.331] (-2146.056) (-2312.684) -- 0:41:26
139000 -- [-2137.773] (-2190.113) (-2171.343) (-2145.673) * (-2182.900) (-2140.620) [-2127.070] (-2322.384) -- 0:41:23
140000 -- [-2144.388] (-2189.313) (-2174.869) (-2156.215) * (-2168.769) (-2148.239) [-2119.613] (-2338.096) -- 0:41:15
Average standard deviation of split frequencies: 0.066791
141000 -- (-2147.248) (-2198.518) (-2174.578) [-2142.064] * (-2153.421) (-2151.965) [-2113.480] (-2344.319) -- 0:41:13
142000 -- [-2145.390] (-2186.582) (-2194.859) (-2142.412) * (-2162.816) (-2168.678) [-2133.696] (-2323.616) -- 0:41:11
143000 -- [-2131.150] (-2174.703) (-2203.106) (-2144.258) * (-2148.436) (-2157.232) [-2136.158] (-2317.499) -- 0:41:03
144000 -- (-2142.358) (-2169.883) (-2183.300) [-2138.334] * (-2152.538) (-2160.932) [-2122.144] (-2313.307) -- 0:41:01
145000 -- [-2144.551] (-2169.422) (-2179.065) (-2137.413) * (-2143.566) (-2162.927) [-2130.929] (-2303.764) -- 0:40:52
Average standard deviation of split frequencies: 0.064276
146000 -- [-2119.231] (-2160.340) (-2189.761) (-2154.765) * (-2137.826) (-2163.893) [-2130.045] (-2291.586) -- 0:40:50
147000 -- (-2138.131) (-2189.991) (-2167.420) [-2141.344] * (-2146.896) (-2169.014) [-2133.061] (-2309.688) -- 0:40:48
148000 -- [-2132.510] (-2159.892) (-2169.428) (-2153.790) * (-2150.681) (-2172.125) [-2126.787] (-2304.850) -- 0:40:40
149000 -- (-2141.907) (-2168.147) [-2150.358] (-2180.963) * (-2154.537) (-2164.606) [-2130.045] (-2318.410) -- 0:40:38
150000 -- [-2131.301] (-2188.176) (-2166.743) (-2165.808) * (-2138.715) (-2171.816) [-2125.613] (-2303.103) -- 0:40:31
Average standard deviation of split frequencies: 0.061965
151000 -- [-2126.426] (-2161.820) (-2163.369) (-2176.827) * (-2136.808) (-2160.198) [-2138.037] (-2319.561) -- 0:40:28
152000 -- [-2122.440] (-2172.619) (-2151.816) (-2185.777) * (-2136.368) [-2159.235] (-2161.547) (-2324.305) -- 0:40:26
153000 -- [-2133.325] (-2195.641) (-2149.491) (-2181.003) * (-2149.474) [-2151.922] (-2158.425) (-2321.035) -- 0:40:19
154000 -- [-2131.694] (-2196.868) (-2139.743) (-2181.337) * [-2159.049] (-2156.640) (-2157.019) (-2315.370) -- 0:40:17
155000 -- (-2136.239) (-2176.335) [-2136.075] (-2193.041) * (-2174.612) [-2140.214] (-2144.915) (-2319.658) -- 0:40:09
Average standard deviation of split frequencies: 0.059331
156000 -- (-2141.521) (-2169.749) [-2126.142] (-2175.910) * (-2154.119) [-2149.992] (-2150.364) (-2315.578) -- 0:40:07
157000 -- [-2136.832] (-2161.823) (-2142.370) (-2176.148) * (-2154.669) [-2145.239] (-2150.144) (-2312.493) -- 0:40:05
158000 -- (-2137.939) (-2178.399) [-2138.457] (-2175.943) * (-2175.005) [-2137.009] (-2152.403) (-2312.838) -- 0:39:58
159000 -- [-2140.014] (-2209.600) (-2141.469) (-2142.230) * (-2176.156) [-2153.517] (-2153.889) (-2307.473) -- 0:39:56
160000 -- (-2147.902) (-2188.715) [-2134.865] (-2145.568) * (-2179.818) [-2143.752] (-2144.953) (-2303.161) -- 0:39:48
Average standard deviation of split frequencies: 0.057654
161000 -- (-2148.775) (-2188.988) (-2137.494) [-2149.355] * (-2161.674) [-2126.918] (-2152.051) (-2298.326) -- 0:39:46
162000 -- [-2128.593] (-2200.020) (-2150.924) (-2154.527) * (-2166.831) [-2122.471] (-2138.690) (-2315.654) -- 0:39:39
163000 -- (-2163.187) (-2237.022) (-2142.913) [-2143.934] * (-2175.294) [-2119.166] (-2146.003) (-2303.895) -- 0:39:37
164000 -- (-2140.969) (-2194.380) [-2137.992] (-2141.345) * (-2162.562) [-2124.030] (-2126.254) (-2317.004) -- 0:39:30
165000 -- (-2150.564) (-2195.724) [-2144.144] (-2143.056) * (-2185.240) (-2140.614) [-2126.715] (-2306.529) -- 0:39:28
Average standard deviation of split frequencies: 0.057222
166000 -- (-2138.805) (-2191.940) [-2144.739] (-2148.789) * (-2182.874) (-2135.921) [-2133.267] (-2312.089) -- 0:39:26
167000 -- [-2144.285] (-2184.663) (-2151.675) (-2153.020) * (-2172.277) (-2129.073) [-2129.471] (-2300.956) -- 0:39:24
168000 -- [-2146.388] (-2159.083) (-2163.677) (-2144.560) * (-2168.172) (-2125.197) [-2126.493] (-2316.620) -- 0:39:22
169000 -- (-2151.036) (-2190.874) (-2163.069) [-2136.906] * (-2199.034) [-2126.490] (-2130.373) (-2325.674) -- 0:39:20
170000 -- (-2151.618) (-2170.434) (-2165.433) [-2145.760] * (-2170.658) (-2129.740) [-2126.468] (-2325.906) -- 0:39:13
Average standard deviation of split frequencies: 0.054298
171000 -- (-2157.914) (-2195.489) (-2176.200) [-2129.617] * (-2187.120) (-2146.949) [-2130.038] (-2322.158) -- 0:39:11
172000 -- (-2178.520) (-2190.379) (-2157.794) [-2131.390] * (-2207.257) (-2147.344) [-2123.475] (-2322.974) -- 0:39:09
173000 -- (-2162.665) (-2185.174) (-2145.279) [-2146.290] * (-2196.951) [-2135.831] (-2136.915) (-2318.267) -- 0:39:02
174000 -- (-2168.344) (-2165.603) [-2158.530] (-2141.537) * (-2190.158) [-2135.415] (-2146.141) (-2317.671) -- 0:39:00
175000 -- (-2174.483) (-2172.868) [-2145.969] (-2126.255) * (-2190.569) [-2138.604] (-2136.658) (-2330.966) -- 0:38:53
Average standard deviation of split frequencies: 0.054133
176000 -- (-2190.606) (-2168.978) [-2145.303] (-2131.794) * (-2190.322) [-2141.149] (-2149.298) (-2321.992) -- 0:38:51
177000 -- (-2189.597) (-2192.329) [-2134.755] (-2130.026) * [-2156.794] (-2147.722) (-2133.471) (-2308.016) -- 0:38:49
178000 -- (-2181.742) (-2202.512) [-2124.016] (-2145.522) * (-2165.597) (-2151.895) [-2134.435] (-2303.913) -- 0:38:42
179000 -- (-2181.467) (-2190.144) [-2128.238] (-2164.667) * (-2165.277) (-2150.890) [-2145.334] (-2305.530) -- 0:38:40
180000 -- (-2184.407) (-2203.909) [-2112.493] (-2155.322) * (-2155.943) (-2156.296) [-2133.857] (-2312.322) -- 0:38:38
Average standard deviation of split frequencies: 0.051361
181000 -- (-2217.696) (-2172.866) [-2129.580] (-2157.354) * [-2133.875] (-2174.649) (-2146.065) (-2300.328) -- 0:38:32
182000 -- (-2191.273) (-2158.800) [-2127.298] (-2160.274) * [-2132.614] (-2167.049) (-2146.910) (-2327.962) -- 0:38:30
183000 -- (-2197.510) (-2146.763) [-2131.403] (-2192.562) * [-2143.341] (-2165.079) (-2153.038) (-2324.466) -- 0:38:28
184000 -- (-2192.464) (-2154.595) [-2133.221] (-2156.140) * (-2150.410) [-2159.673] (-2146.332) (-2317.944) -- 0:38:21
185000 -- (-2192.251) (-2146.656) [-2125.370] (-2186.887) * (-2160.935) [-2152.163] (-2139.042) (-2327.725) -- 0:38:19
Average standard deviation of split frequencies: 0.052023
186000 -- (-2219.920) [-2141.940] (-2131.231) (-2167.015) * (-2162.886) [-2133.917] (-2137.412) (-2339.810) -- 0:38:17
187000 -- (-2212.964) (-2134.418) [-2126.397] (-2174.918) * (-2154.859) [-2131.462] (-2141.438) (-2328.648) -- 0:38:11
188000 -- (-2218.818) (-2166.454) (-2121.379) [-2151.532] * (-2150.068) [-2120.748] (-2151.345) (-2343.234) -- 0:38:09
189000 -- (-2184.420) (-2156.460) [-2120.101] (-2139.296) * (-2145.283) [-2128.312] (-2171.704) (-2343.330) -- 0:38:07
190000 -- (-2215.052) (-2156.286) [-2113.579] (-2161.451) * [-2128.432] (-2128.505) (-2172.563) (-2315.511) -- 0:38:00
Average standard deviation of split frequencies: 0.051985
191000 -- (-2211.883) (-2141.939) [-2124.486] (-2135.015) * (-2141.369) [-2131.946] (-2163.107) (-2303.277) -- 0:37:58
192000 -- (-2210.093) (-2141.791) (-2143.208) [-2133.190] * [-2135.869] (-2139.741) (-2169.398) (-2307.440) -- 0:37:52
193000 -- (-2201.747) (-2154.239) [-2128.858] (-2136.427) * [-2126.681] (-2139.957) (-2168.408) (-2307.133) -- 0:37:50
194000 -- (-2178.938) (-2141.402) [-2125.814] (-2159.637) * (-2136.677) [-2150.259] (-2162.532) (-2317.450) -- 0:37:44
195000 -- (-2179.564) (-2138.750) [-2122.554] (-2171.248) * [-2133.015] (-2160.972) (-2154.910) (-2323.818) -- 0:37:42
Average standard deviation of split frequencies: 0.050887
196000 -- (-2188.476) (-2146.555) [-2128.417] (-2175.651) * [-2138.726] (-2137.983) (-2163.559) (-2325.128) -- 0:37:36
197000 -- (-2175.567) (-2135.224) [-2126.619] (-2173.195) * [-2138.790] (-2145.938) (-2170.514) (-2337.886) -- 0:37:34
198000 -- (-2141.183) (-2134.606) [-2135.967] (-2159.699) * [-2144.410] (-2154.356) (-2162.565) (-2331.963) -- 0:37:32
199000 -- (-2146.042) (-2143.526) [-2142.333] (-2178.117) * [-2135.355] (-2146.332) (-2160.331) (-2316.434) -- 0:37:26
200000 -- (-2148.287) (-2141.395) [-2131.426] (-2174.342) * (-2152.674) [-2147.469] (-2160.202) (-2320.391) -- 0:37:24
Average standard deviation of split frequencies: 0.048282
201000 -- [-2143.945] (-2150.297) (-2118.712) (-2196.747) * (-2167.650) [-2143.729] (-2163.068) (-2310.966) -- 0:37:17
202000 -- (-2158.388) (-2158.007) [-2123.203] (-2186.108) * (-2169.112) [-2133.884] (-2146.621) (-2316.846) -- 0:37:15
203000 -- (-2171.328) (-2159.233) [-2126.076] (-2190.157) * (-2157.267) [-2126.399] (-2174.464) (-2318.696) -- 0:37:10
204000 -- (-2164.154) (-2162.631) [-2132.713] (-2192.245) * (-2162.159) [-2131.780] (-2146.183) (-2311.958) -- 0:37:08
205000 -- (-2155.675) (-2162.056) [-2133.649] (-2194.920) * (-2146.567) [-2131.225] (-2156.520) (-2299.661) -- 0:37:02
Average standard deviation of split frequencies: 0.045286
206000 -- (-2170.466) [-2153.940] (-2139.798) (-2194.482) * (-2146.063) [-2134.162] (-2162.250) (-2326.121) -- 0:37:00
207000 -- (-2188.177) (-2151.026) [-2135.687] (-2179.968) * (-2151.107) [-2138.161] (-2175.582) (-2302.737) -- 0:36:54
208000 -- (-2195.415) (-2158.725) [-2139.689] (-2156.986) * (-2156.884) [-2139.831] (-2204.668) (-2305.654) -- 0:36:52
209000 -- (-2207.455) (-2149.604) [-2139.153] (-2177.102) * (-2154.048) [-2129.281] (-2182.737) (-2291.336) -- 0:36:50
210000 -- (-2201.984) [-2149.432] (-2144.807) (-2145.241) * (-2169.675) [-2141.369] (-2174.755) (-2297.344) -- 0:36:44
Average standard deviation of split frequencies: 0.044467
211000 -- (-2198.678) (-2141.269) (-2154.788) [-2139.548] * (-2154.627) [-2142.737] (-2159.679) (-2299.107) -- 0:36:42
212000 -- (-2213.560) (-2145.628) [-2127.121] (-2180.697) * (-2161.070) [-2131.768] (-2164.548) (-2317.118) -- 0:36:36
213000 -- (-2209.293) (-2163.603) [-2132.903] (-2162.136) * (-2167.505) [-2128.100] (-2161.140) (-2329.315) -- 0:36:34
214000 -- (-2224.555) (-2176.163) [-2129.967] (-2156.001) * (-2129.419) [-2124.865] (-2155.508) (-2288.006) -- 0:36:29
215000 -- (-2202.852) (-2161.910) [-2128.735] (-2160.775) * [-2132.052] (-2156.185) (-2149.059) (-2284.527) -- 0:36:27
Average standard deviation of split frequencies: 0.044682
216000 -- (-2197.212) (-2154.276) [-2123.988] (-2151.511) * (-2137.832) [-2166.544] (-2179.809) (-2297.267) -- 0:36:21
217000 -- (-2228.979) (-2164.992) [-2136.990] (-2152.226) * [-2156.144] (-2180.887) (-2166.494) (-2294.074) -- 0:36:19
218000 -- (-2214.751) (-2169.146) [-2129.878] (-2151.743) * [-2149.554] (-2161.268) (-2178.180) (-2287.211) -- 0:36:13
219000 -- (-2252.026) (-2163.830) [-2123.766] (-2157.499) * [-2137.109] (-2148.859) (-2163.320) (-2301.645) -- 0:36:11
220000 -- (-2205.415) (-2176.766) [-2126.344] (-2145.263) * [-2134.087] (-2165.169) (-2171.873) (-2296.584) -- 0:36:09
Average standard deviation of split frequencies: 0.042321
221000 -- (-2215.737) (-2145.588) [-2123.746] (-2153.431) * [-2132.371] (-2149.883) (-2163.709) (-2300.908) -- 0:36:04
222000 -- (-2218.076) (-2130.819) [-2129.619] (-2162.033) * (-2138.246) [-2154.942] (-2165.836) (-2303.652) -- 0:36:02
223000 -- (-2249.556) [-2130.780] (-2130.635) (-2183.017) * [-2130.128] (-2157.162) (-2169.319) (-2324.941) -- 0:35:56
224000 -- (-2254.054) (-2136.119) [-2130.750] (-2161.774) * [-2135.412] (-2150.462) (-2162.534) (-2324.793) -- 0:35:54
225000 -- (-2213.172) (-2145.033) [-2123.797] (-2191.954) * [-2140.916] (-2134.536) (-2163.296) (-2315.486) -- 0:35:52
Average standard deviation of split frequencies: 0.040646
226000 -- (-2205.691) [-2129.255] (-2127.887) (-2175.674) * [-2137.967] (-2145.260) (-2157.571) (-2315.823) -- 0:35:47
227000 -- (-2213.162) [-2142.223] (-2131.440) (-2164.510) * (-2138.159) [-2137.214] (-2162.518) (-2309.795) -- 0:35:45
228000 -- (-2179.030) (-2174.562) [-2141.088] (-2176.162) * [-2142.210] (-2172.926) (-2167.161) (-2309.149) -- 0:35:39
229000 -- (-2191.513) (-2178.290) [-2147.498] (-2174.686) * [-2134.635] (-2157.328) (-2179.049) (-2338.858) -- 0:35:37
230000 -- (-2177.527) (-2180.378) [-2137.765] (-2184.784) * [-2147.866] (-2155.793) (-2163.441) (-2340.943) -- 0:35:32
Average standard deviation of split frequencies: 0.040930
231000 -- (-2188.077) (-2170.243) [-2132.081] (-2158.420) * [-2149.705] (-2188.652) (-2149.753) (-2310.680) -- 0:35:30
232000 -- (-2191.523) (-2159.139) (-2150.883) [-2153.948] * [-2123.716] (-2172.133) (-2159.548) (-2306.701) -- 0:35:25
233000 -- (-2185.991) (-2189.976) [-2135.373] (-2157.037) * [-2124.610] (-2169.159) (-2157.438) (-2295.398) -- 0:35:23
234000 -- (-2187.605) (-2167.885) [-2125.562] (-2154.360) * [-2123.681] (-2166.790) (-2150.478) (-2315.132) -- 0:35:17
235000 -- (-2202.806) (-2170.038) [-2131.225] (-2161.045) * [-2138.179] (-2180.064) (-2135.438) (-2316.942) -- 0:35:15
Average standard deviation of split frequencies: 0.040489
236000 -- (-2228.859) (-2161.575) [-2134.609] (-2156.572) * [-2138.799] (-2156.075) (-2153.425) (-2317.788) -- 0:35:10
237000 -- (-2206.309) (-2140.876) [-2132.158] (-2156.301) * [-2134.552] (-2150.091) (-2143.829) (-2320.310) -- 0:35:08
238000 -- (-2202.301) (-2145.297) [-2121.814] (-2136.973) * (-2152.771) (-2144.890) [-2129.530] (-2308.950) -- 0:35:06
239000 -- (-2206.083) (-2165.127) [-2115.746] (-2147.786) * (-2143.207) (-2151.165) [-2136.179] (-2311.661) -- 0:35:01
240000 -- (-2204.862) (-2146.851) [-2129.254] (-2178.748) * (-2158.397) (-2155.422) [-2124.335] (-2318.775) -- 0:34:59
Average standard deviation of split frequencies: 0.040618
241000 -- (-2202.388) (-2153.605) [-2113.984] (-2155.154) * (-2172.624) (-2150.000) [-2120.141] (-2321.640) -- 0:34:54
242000 -- (-2210.998) (-2149.292) [-2107.234] (-2163.185) * (-2159.557) (-2159.398) [-2121.516] (-2316.582) -- 0:34:52
243000 -- (-2203.108) (-2152.770) [-2117.761] (-2154.516) * (-2172.421) (-2168.551) [-2125.369] (-2299.134) -- 0:34:47
244000 -- (-2188.504) (-2156.902) [-2133.319] (-2149.160) * (-2177.765) [-2152.628] (-2138.183) (-2314.407) -- 0:34:45
245000 -- (-2194.256) (-2147.378) [-2130.527] (-2161.808) * (-2177.540) (-2166.593) [-2123.609] (-2316.992) -- 0:34:40
Average standard deviation of split frequencies: 0.040948
246000 -- (-2196.694) (-2146.720) [-2132.024] (-2163.952) * (-2182.017) (-2158.286) [-2122.768] (-2319.665) -- 0:34:38
247000 -- (-2177.633) [-2148.462] (-2135.151) (-2185.805) * (-2149.033) (-2161.355) [-2139.688] (-2305.804) -- 0:34:33
248000 -- (-2179.769) (-2156.817) [-2136.547] (-2173.694) * (-2138.154) (-2161.516) [-2139.712] (-2298.957) -- 0:34:31
249000 -- (-2204.142) (-2153.702) [-2142.587] (-2166.062) * (-2132.304) (-2148.853) [-2136.008] (-2294.984) -- 0:34:29
250000 -- (-2194.185) [-2157.503] (-2153.411) (-2161.130) * [-2132.138] (-2160.970) (-2144.863) (-2312.007) -- 0:34:24
Average standard deviation of split frequencies: 0.040087
251000 -- (-2218.940) (-2163.491) [-2140.277] (-2166.274) * [-2135.653] (-2160.802) (-2148.956) (-2308.115) -- 0:34:21
252000 -- (-2210.493) (-2157.081) [-2129.689] (-2159.496) * (-2146.431) (-2160.815) [-2139.770] (-2290.857) -- 0:34:17
253000 -- (-2180.420) (-2168.746) [-2136.522] (-2148.633) * (-2143.356) (-2162.200) [-2133.425] (-2305.144) -- 0:34:14
254000 -- (-2206.680) (-2185.893) [-2127.951] (-2161.927) * (-2155.625) (-2164.041) [-2155.811] (-2298.266) -- 0:34:12
255000 -- (-2180.985) (-2186.940) [-2123.732] (-2155.371) * [-2146.863] (-2157.366) (-2157.591) (-2297.476) -- 0:34:08
Average standard deviation of split frequencies: 0.039009
256000 -- (-2164.734) (-2218.340) [-2132.336] (-2167.470) * [-2140.607] (-2146.159) (-2160.667) (-2300.267) -- 0:34:05
257000 -- (-2177.997) (-2173.053) [-2137.676] (-2144.338) * [-2142.895] (-2158.719) (-2153.824) (-2296.585) -- 0:34:01
258000 -- (-2159.741) (-2190.142) [-2136.172] (-2134.979) * [-2136.425] (-2172.554) (-2150.891) (-2306.433) -- 0:33:59
259000 -- (-2158.142) (-2196.793) (-2145.296) [-2135.741] * [-2127.878] (-2174.797) (-2146.373) (-2313.931) -- 0:33:57
260000 -- (-2169.719) (-2200.918) [-2141.453] (-2149.082) * [-2127.823] (-2161.633) (-2144.119) (-2312.236) -- 0:33:52
Average standard deviation of split frequencies: 0.038613
261000 -- (-2157.635) (-2195.309) [-2120.977] (-2141.687) * [-2127.638] (-2177.150) (-2145.099) (-2307.273) -- 0:33:50
262000 -- (-2148.787) (-2212.180) [-2132.645] (-2155.719) * [-2136.138] (-2173.925) (-2149.952) (-2300.719) -- 0:33:45
263000 -- (-2141.655) (-2202.715) [-2133.030] (-2161.995) * [-2140.847] (-2174.053) (-2145.208) (-2315.973) -- 0:33:43
264000 -- (-2130.886) (-2177.549) [-2114.176] (-2151.874) * [-2125.881] (-2166.317) (-2141.114) (-2319.135) -- 0:33:41
265000 -- [-2127.897] (-2196.029) (-2122.637) (-2160.358) * [-2124.962] (-2158.644) (-2150.875) (-2318.733) -- 0:33:36
Average standard deviation of split frequencies: 0.039419
266000 -- (-2135.474) (-2167.814) [-2133.498] (-2141.732) * [-2138.608] (-2165.282) (-2149.399) (-2307.581) -- 0:33:34
267000 -- (-2128.819) (-2147.501) (-2146.308) [-2133.551] * [-2137.610] (-2151.527) (-2145.327) (-2318.480) -- 0:33:32
268000 -- (-2150.824) (-2175.040) (-2143.666) [-2142.255] * [-2136.012] (-2149.827) (-2156.157) (-2305.189) -- 0:33:27
269000 -- (-2141.749) (-2186.610) (-2152.793) [-2136.955] * [-2133.353] (-2149.710) (-2148.041) (-2305.345) -- 0:33:25
270000 -- [-2142.258] (-2169.839) (-2150.473) (-2147.849) * [-2132.582] (-2163.354) (-2150.301) (-2315.196) -- 0:33:20
Average standard deviation of split frequencies: 0.039258
271000 -- (-2138.141) (-2188.220) (-2147.703) [-2139.827] * (-2158.316) [-2174.015] (-2144.102) (-2315.877) -- 0:33:18
272000 -- (-2135.844) (-2181.788) [-2145.359] (-2130.468) * (-2152.950) (-2178.048) [-2131.981] (-2307.778) -- 0:33:16
273000 -- (-2130.012) (-2179.638) (-2177.701) [-2128.574] * (-2155.477) (-2186.945) [-2142.062] (-2300.533) -- 0:33:11
274000 -- (-2128.418) (-2204.090) (-2158.325) [-2136.487] * (-2140.041) (-2178.530) [-2141.229] (-2304.222) -- 0:33:09
275000 -- [-2126.988] (-2178.394) (-2174.339) (-2128.780) * (-2143.438) (-2168.993) [-2135.764] (-2312.584) -- 0:33:05
Average standard deviation of split frequencies: 0.040022
276000 -- (-2141.347) (-2203.185) (-2162.255) [-2139.676] * (-2128.080) (-2192.742) [-2135.557] (-2312.278) -- 0:33:03
277000 -- (-2130.025) (-2200.863) (-2145.331) [-2132.945] * [-2132.937] (-2201.745) (-2141.108) (-2318.642) -- 0:33:01
278000 -- [-2112.796] (-2192.875) (-2133.097) (-2141.674) * [-2142.543] (-2158.019) (-2160.001) (-2329.212) -- 0:32:56
279000 -- (-2124.790) (-2201.585) (-2153.181) [-2144.916] * [-2139.524] (-2150.973) (-2165.115) (-2313.004) -- 0:32:54
280000 -- (-2127.101) (-2186.818) (-2152.488) [-2138.932] * [-2140.441] (-2159.429) (-2152.799) (-2320.429) -- 0:32:49
Average standard deviation of split frequencies: 0.041717
281000 -- [-2114.096] (-2207.581) (-2138.475) (-2160.881) * [-2137.492] (-2178.125) (-2154.785) (-2318.072) -- 0:32:47
282000 -- [-2128.766] (-2240.444) (-2154.285) (-2156.706) * [-2130.312] (-2152.750) (-2175.442) (-2330.952) -- 0:32:45
283000 -- [-2133.248] (-2223.454) (-2157.873) (-2159.460) * [-2134.716] (-2150.781) (-2179.550) (-2327.444) -- 0:32:40
284000 -- [-2139.031] (-2196.180) (-2165.406) (-2133.231) * [-2130.670] (-2156.537) (-2160.068) (-2329.338) -- 0:32:38
285000 -- [-2119.822] (-2184.023) (-2177.044) (-2136.716) * [-2136.916] (-2173.915) (-2150.122) (-2310.810) -- 0:32:36
Average standard deviation of split frequencies: 0.042052
286000 -- [-2117.787] (-2171.460) (-2143.168) (-2158.551) * (-2165.628) [-2143.878] (-2135.601) (-2302.954) -- 0:32:32
287000 -- (-2151.350) (-2204.771) [-2131.163] (-2138.276) * (-2147.499) (-2162.117) [-2125.236] (-2310.255) -- 0:32:30
288000 -- (-2150.036) (-2183.592) (-2145.936) [-2132.076] * (-2157.191) (-2148.791) [-2129.950] (-2328.988) -- 0:32:28
289000 -- (-2168.309) (-2164.375) (-2137.937) [-2129.868] * (-2152.360) (-2159.050) [-2135.426] (-2342.210) -- 0:32:23
290000 -- (-2182.914) (-2152.855) [-2117.983] (-2141.280) * (-2136.133) (-2152.911) [-2142.557] (-2341.966) -- 0:32:21
Average standard deviation of split frequencies: 0.042001
291000 -- (-2165.353) (-2191.294) [-2123.129] (-2136.157) * [-2144.091] (-2146.803) (-2159.733) (-2332.134) -- 0:32:19
292000 -- (-2162.591) (-2194.583) (-2133.058) [-2129.866] * [-2146.469] (-2148.995) (-2170.586) (-2318.610) -- 0:32:14
293000 -- (-2161.875) (-2192.652) (-2150.311) [-2125.370] * (-2144.923) [-2149.089] (-2191.878) (-2315.982) -- 0:32:12
294000 -- (-2163.869) (-2190.793) (-2151.328) [-2130.745] * (-2163.068) (-2147.894) [-2155.765] (-2323.647) -- 0:32:10
295000 -- (-2170.307) (-2208.216) (-2132.674) [-2130.111] * (-2158.870) [-2129.019] (-2141.039) (-2307.818) -- 0:32:08
Average standard deviation of split frequencies: 0.043670
296000 -- (-2166.015) (-2224.584) [-2133.448] (-2133.443) * (-2144.800) (-2143.226) [-2140.748] (-2319.746) -- 0:32:06
297000 -- (-2164.605) (-2191.548) [-2127.941] (-2133.426) * [-2147.039] (-2173.471) (-2150.801) (-2309.538) -- 0:32:02
298000 -- (-2175.979) (-2236.780) (-2131.724) [-2128.797] * (-2151.015) (-2179.052) [-2147.034] (-2309.173) -- 0:31:59
299000 -- (-2163.130) (-2210.612) [-2138.385] (-2138.149) * (-2136.774) (-2153.432) [-2138.234] (-2307.015) -- 0:31:55
300000 -- (-2190.738) (-2210.683) [-2146.490] (-2138.639) * [-2139.125] (-2145.778) (-2141.471) (-2291.490) -- 0:31:53
Average standard deviation of split frequencies: 0.046697
301000 -- (-2196.077) (-2216.918) (-2153.491) [-2140.067] * (-2147.655) [-2129.878] (-2135.001) (-2283.098) -- 0:31:51
302000 -- (-2201.196) (-2183.245) (-2154.387) [-2145.221] * (-2159.653) (-2136.291) [-2132.919] (-2288.984) -- 0:31:46
303000 -- (-2184.771) (-2194.014) (-2143.458) [-2149.692] * (-2172.207) [-2142.647] (-2136.935) (-2287.007) -- 0:31:44
304000 -- (-2191.006) (-2164.662) (-2152.680) [-2138.959] * (-2170.462) (-2141.103) [-2143.053] (-2297.158) -- 0:31:40
305000 -- (-2193.763) (-2180.069) (-2165.559) [-2132.181] * (-2172.671) [-2144.567] (-2143.436) (-2282.167) -- 0:31:38
Average standard deviation of split frequencies: 0.049630
306000 -- (-2179.729) (-2188.731) (-2182.255) [-2124.382] * (-2167.556) [-2132.425] (-2135.889) (-2293.559) -- 0:31:36
307000 -- (-2186.286) (-2176.970) (-2167.478) [-2115.073] * (-2173.827) [-2130.196] (-2141.366) (-2300.857) -- 0:31:31
308000 -- (-2178.416) (-2186.743) (-2171.650) [-2124.081] * (-2180.596) [-2125.980] (-2154.006) (-2308.261) -- 0:31:29
309000 -- (-2177.191) (-2190.016) (-2180.792) [-2136.526] * (-2165.764) [-2137.478] (-2163.122) (-2301.328) -- 0:31:25
310000 -- (-2179.396) (-2196.469) (-2159.493) [-2149.740] * (-2152.464) [-2143.101] (-2170.715) (-2285.138) -- 0:31:23
Average standard deviation of split frequencies: 0.053109
311000 -- (-2174.509) (-2180.341) (-2152.501) [-2132.705] * (-2160.147) [-2133.908] (-2169.737) (-2280.155) -- 0:31:20
312000 -- (-2165.749) (-2199.358) (-2157.869) [-2126.799] * (-2163.892) [-2133.983] (-2163.506) (-2296.825) -- 0:31:16
313000 -- (-2153.161) (-2215.400) (-2148.765) [-2117.383] * (-2158.258) [-2126.400] (-2170.023) (-2296.868) -- 0:31:14
314000 -- (-2150.661) (-2230.411) (-2163.321) [-2126.595] * (-2169.078) [-2134.283] (-2159.640) (-2295.815) -- 0:31:10
315000 -- (-2149.209) (-2213.165) (-2171.010) [-2129.487] * (-2145.535) (-2144.366) [-2146.603] (-2302.575) -- 0:31:07
Average standard deviation of split frequencies: 0.054511
316000 -- (-2155.577) (-2200.616) (-2150.904) [-2123.672] * (-2144.093) [-2132.932] (-2155.857) (-2301.607) -- 0:31:03
317000 -- (-2147.726) (-2218.410) (-2153.998) [-2128.997] * [-2147.793] (-2144.506) (-2154.063) (-2303.172) -- 0:31:01
318000 -- (-2139.761) (-2190.902) (-2158.665) [-2126.066] * (-2158.379) [-2127.865] (-2155.086) (-2303.571) -- 0:30:59
319000 -- (-2138.368) (-2209.550) (-2150.535) [-2130.830] * (-2154.605) [-2129.797] (-2140.605) (-2302.167) -- 0:30:55
320000 -- [-2130.099] (-2202.609) (-2158.007) (-2128.712) * (-2169.298) [-2129.480] (-2136.951) (-2299.243) -- 0:30:53
Average standard deviation of split frequencies: 0.055426
321000 -- [-2134.348] (-2192.975) (-2156.476) (-2126.493) * (-2177.294) (-2137.713) [-2126.675] (-2299.651) -- 0:30:50
322000 -- [-2134.078] (-2181.274) (-2156.683) (-2138.159) * (-2155.818) (-2151.776) [-2138.382] (-2308.234) -- 0:30:46
323000 -- (-2134.682) (-2194.664) (-2155.255) [-2131.619] * [-2162.126] (-2169.355) (-2153.469) (-2328.703) -- 0:30:44
324000 -- [-2120.575] (-2178.848) (-2148.889) (-2144.414) * (-2152.338) (-2161.753) [-2146.760] (-2309.948) -- 0:30:42
325000 -- (-2150.539) (-2191.591) (-2158.214) [-2147.628] * (-2144.172) (-2161.263) [-2138.942] (-2308.033) -- 0:30:38
Average standard deviation of split frequencies: 0.055613
326000 -- (-2146.286) (-2173.667) (-2154.071) [-2125.450] * (-2148.581) (-2162.210) [-2140.307] (-2312.301) -- 0:30:35
327000 -- (-2149.793) (-2162.700) (-2166.018) [-2125.907] * [-2153.815] (-2189.612) (-2139.199) (-2305.537) -- 0:30:31
328000 -- [-2134.362] (-2179.659) (-2174.821) (-2135.544) * (-2149.725) (-2171.521) [-2146.015] (-2309.218) -- 0:30:29
329000 -- (-2130.885) (-2176.232) (-2178.963) [-2127.299] * [-2135.702] (-2173.901) (-2143.505) (-2312.584) -- 0:30:27
330000 -- (-2136.922) (-2155.586) (-2157.373) [-2123.302] * [-2139.912] (-2177.330) (-2136.335) (-2310.506) -- 0:30:23
Average standard deviation of split frequencies: 0.057025
331000 -- (-2146.375) (-2164.348) (-2181.831) [-2114.606] * [-2145.915] (-2179.799) (-2142.769) (-2319.290) -- 0:30:21
332000 -- (-2142.814) (-2169.019) (-2194.409) [-2112.257] * (-2142.765) (-2168.992) [-2129.750] (-2307.502) -- 0:30:16
333000 -- (-2151.811) (-2180.376) (-2183.805) [-2117.547] * (-2156.753) (-2181.145) [-2143.618] (-2323.120) -- 0:30:14
334000 -- (-2135.739) (-2202.501) (-2192.212) [-2127.406] * (-2144.546) (-2167.447) [-2140.202] (-2317.201) -- 0:30:10
335000 -- (-2156.755) (-2196.732) (-2185.775) [-2129.594] * [-2145.457] (-2167.628) (-2145.734) (-2317.941) -- 0:30:08
Average standard deviation of split frequencies: 0.056082
336000 -- [-2147.540] (-2211.230) (-2166.670) (-2133.991) * (-2173.082) (-2170.788) [-2127.458] (-2317.193) -- 0:30:04
337000 -- [-2141.030] (-2214.082) (-2160.710) (-2130.335) * (-2165.801) (-2161.835) [-2140.618] (-2325.187) -- 0:30:02
338000 -- (-2140.494) (-2165.759) (-2159.974) [-2122.755] * (-2180.244) (-2170.122) [-2135.510] (-2327.533) -- 0:29:57
339000 -- (-2153.582) (-2151.739) (-2168.686) [-2123.264] * (-2168.545) (-2148.507) [-2134.325] (-2297.240) -- 0:29:55
340000 -- (-2152.076) (-2146.338) (-2164.875) [-2126.247] * (-2145.679) (-2170.354) [-2139.611] (-2289.517) -- 0:29:51
Average standard deviation of split frequencies: 0.056361
341000 -- (-2184.223) (-2149.405) (-2174.481) [-2132.035] * [-2148.182] (-2182.369) (-2141.902) (-2297.434) -- 0:29:49
342000 -- (-2185.933) (-2147.403) (-2175.699) [-2121.322] * [-2147.797] (-2181.322) (-2141.101) (-2293.367) -- 0:29:47
343000 -- (-2194.438) (-2139.693) (-2178.270) [-2117.524] * (-2160.620) (-2160.560) [-2140.338] (-2295.582) -- 0:29:43
344000 -- (-2203.479) (-2129.127) (-2178.832) [-2113.219] * (-2157.795) (-2184.391) [-2137.174] (-2296.005) -- 0:29:41
345000 -- (-2183.995) [-2125.102] (-2176.781) (-2127.956) * (-2147.277) (-2175.960) [-2137.369] (-2316.715) -- 0:29:37
Average standard deviation of split frequencies: 0.056649
346000 -- (-2197.855) [-2129.172] (-2158.986) (-2151.451) * (-2149.702) (-2164.160) [-2130.573] (-2310.183) -- 0:29:34
347000 -- (-2174.974) [-2123.498] (-2196.966) (-2147.121) * (-2153.970) (-2166.982) [-2135.431] (-2316.633) -- 0:29:30
348000 -- (-2161.962) [-2123.621] (-2179.073) (-2150.916) * (-2145.393) (-2154.591) [-2123.007] (-2319.587) -- 0:29:28
349000 -- (-2201.485) [-2126.963] (-2158.360) (-2143.072) * (-2151.771) (-2144.476) [-2132.210] (-2325.137) -- 0:29:24
350000 -- (-2181.273) (-2128.361) (-2179.693) [-2131.843] * (-2161.764) (-2147.530) [-2140.308] (-2337.393) -- 0:29:22
Average standard deviation of split frequencies: 0.056815
351000 -- (-2186.436) [-2130.847] (-2174.452) (-2147.035) * (-2167.336) (-2140.585) [-2122.463] (-2321.042) -- 0:29:20
352000 -- (-2179.623) [-2129.688] (-2179.969) (-2128.040) * (-2181.090) (-2146.413) [-2142.257] (-2308.785) -- 0:29:18
353000 -- (-2170.048) (-2131.685) (-2192.712) [-2130.913] * (-2175.523) (-2149.465) [-2141.784] (-2306.969) -- 0:29:14
354000 -- (-2170.568) [-2121.767] (-2207.988) (-2137.474) * (-2169.359) (-2163.958) [-2141.939] (-2303.033) -- 0:29:11
355000 -- (-2148.488) [-2120.180] (-2179.138) (-2137.245) * (-2168.317) (-2161.555) [-2134.464] (-2314.154) -- 0:29:07
Average standard deviation of split frequencies: 0.056730
356000 -- (-2167.261) [-2112.745] (-2170.467) (-2138.381) * (-2175.050) [-2158.482] (-2139.768) (-2315.432) -- 0:29:05
357000 -- (-2178.646) [-2115.152] (-2155.375) (-2138.773) * (-2174.091) (-2162.681) [-2139.225] (-2310.527) -- 0:29:03
358000 -- (-2196.423) [-2119.781] (-2152.078) (-2122.885) * (-2160.726) (-2144.767) [-2136.224] (-2316.462) -- 0:28:59
359000 -- (-2209.706) [-2111.236] (-2157.317) (-2141.914) * (-2168.187) (-2141.115) [-2134.322] (-2305.876) -- 0:28:57
360000 -- (-2157.151) [-2118.178] (-2137.455) (-2168.146) * (-2187.778) (-2145.019) [-2136.577] (-2301.723) -- 0:28:53
Average standard deviation of split frequencies: 0.057050
361000 -- (-2175.404) (-2128.515) (-2157.912) [-2148.453] * (-2179.536) (-2140.303) [-2135.217] (-2303.038) -- 0:28:51
362000 -- (-2170.552) [-2119.613] (-2176.265) (-2139.645) * (-2188.006) (-2151.441) [-2124.584] (-2293.953) -- 0:28:48
363000 -- (-2136.301) [-2127.288] (-2193.964) (-2138.959) * (-2178.570) [-2120.831] (-2138.029) (-2310.093) -- 0:28:44
364000 -- (-2145.602) [-2136.750] (-2208.276) (-2149.061) * (-2186.577) (-2124.365) [-2125.556] (-2310.658) -- 0:28:42
365000 -- [-2128.277] (-2158.237) (-2178.781) (-2148.087) * (-2175.947) [-2130.202] (-2138.457) (-2311.809) -- 0:28:40
Average standard deviation of split frequencies: 0.056289
366000 -- [-2135.562] (-2150.217) (-2181.761) (-2168.908) * (-2163.506) [-2134.421] (-2138.142) (-2318.011) -- 0:28:36
367000 -- [-2133.699] (-2155.238) (-2156.803) (-2164.031) * (-2167.326) (-2129.829) [-2141.624] (-2333.981) -- 0:28:34
368000 -- [-2142.331] (-2149.516) (-2138.179) (-2166.216) * (-2173.279) (-2133.764) [-2137.173] (-2342.943) -- 0:28:32
369000 -- [-2153.948] (-2152.438) (-2134.657) (-2169.052) * (-2165.907) [-2138.937] (-2156.747) (-2348.786) -- 0:28:28
370000 -- (-2159.734) [-2141.708] (-2141.236) (-2171.097) * (-2154.714) [-2133.667] (-2173.319) (-2340.621) -- 0:28:26
Average standard deviation of split frequencies: 0.053803
371000 -- (-2188.913) (-2149.409) [-2138.384] (-2179.603) * (-2167.673) [-2130.697] (-2171.226) (-2333.809) -- 0:28:23
372000 -- (-2179.140) (-2155.983) [-2128.871] (-2179.559) * (-2167.865) [-2152.178] (-2189.574) (-2317.142) -- 0:28:19
373000 -- (-2197.811) (-2151.385) [-2130.423] (-2181.043) * (-2154.172) [-2154.366] (-2194.144) (-2301.394) -- 0:28:17
374000 -- (-2161.192) (-2174.840) [-2130.022] (-2161.347) * (-2160.207) [-2134.444] (-2188.048) (-2302.162) -- 0:28:15
375000 -- (-2152.605) (-2204.398) [-2124.855] (-2154.410) * (-2163.085) [-2125.290] (-2185.904) (-2299.050) -- 0:28:15
Average standard deviation of split frequencies: 0.053110
376000 -- (-2167.971) (-2218.553) [-2124.287] (-2146.784) * (-2165.426) [-2133.315] (-2167.113) (-2344.208) -- 0:28:14
377000 -- (-2164.937) (-2188.479) [-2133.058] (-2154.353) * (-2178.047) [-2133.564] (-2155.115) (-2327.602) -- 0:28:13
378000 -- (-2160.288) (-2163.605) [-2133.849] (-2146.867) * (-2154.719) [-2144.644] (-2164.885) (-2313.815) -- 0:28:11
379000 -- (-2192.417) [-2130.354] (-2138.332) (-2158.094) * (-2162.726) [-2135.560] (-2156.899) (-2327.738) -- 0:28:10
380000 -- (-2194.574) (-2144.933) [-2137.797] (-2175.367) * (-2163.370) [-2136.863] (-2169.407) (-2331.887) -- 0:28:07
Average standard deviation of split frequencies: 0.052665
381000 -- (-2195.495) [-2144.006] (-2150.267) (-2172.573) * (-2163.619) [-2136.537] (-2147.847) (-2333.495) -- 0:28:04
382000 -- (-2194.012) [-2139.428] (-2139.768) (-2166.148) * (-2145.527) [-2133.532] (-2161.789) (-2316.900) -- 0:28:00
383000 -- (-2216.363) [-2126.157] (-2139.892) (-2152.460) * [-2142.635] (-2142.153) (-2166.831) (-2314.610) -- 0:27:58
384000 -- (-2201.252) [-2127.869] (-2154.214) (-2140.407) * (-2149.940) (-2144.811) [-2141.297] (-2327.065) -- 0:27:54
385000 -- (-2181.112) (-2123.287) (-2179.274) [-2136.442] * (-2153.779) [-2135.954] (-2178.259) (-2315.964) -- 0:27:52
Average standard deviation of split frequencies: 0.051598
386000 -- (-2192.832) (-2133.803) (-2170.512) [-2134.709] * (-2150.194) [-2126.176] (-2185.139) (-2312.527) -- 0:27:48
387000 -- (-2163.114) [-2124.916] (-2177.699) (-2147.545) * [-2145.417] (-2132.185) (-2176.740) (-2320.138) -- 0:27:46
388000 -- (-2160.222) [-2130.911] (-2192.660) (-2148.130) * (-2159.610) [-2130.511] (-2182.982) (-2304.428) -- 0:27:42
389000 -- (-2150.585) [-2138.259] (-2189.122) (-2158.768) * (-2167.430) [-2118.340] (-2155.572) (-2311.645) -- 0:27:40
390000 -- [-2131.840] (-2147.567) (-2183.607) (-2148.753) * (-2183.417) [-2131.186] (-2182.755) (-2317.638) -- 0:27:36
Average standard deviation of split frequencies: 0.050445
391000 -- (-2139.366) (-2156.457) (-2179.461) [-2120.727] * (-2180.859) [-2132.637] (-2167.040) (-2303.988) -- 0:27:34
392000 -- (-2149.138) (-2158.452) (-2187.904) [-2118.593] * (-2192.317) [-2123.893] (-2152.574) (-2296.993) -- 0:27:31
393000 -- (-2161.682) (-2151.731) (-2192.177) [-2132.762] * (-2187.206) [-2130.162] (-2146.897) (-2312.903) -- 0:27:28
394000 -- (-2160.257) (-2145.861) (-2184.819) [-2126.548] * (-2181.398) [-2133.403] (-2147.011) (-2298.681) -- 0:27:25
395000 -- (-2156.785) (-2146.255) (-2198.642) [-2128.292] * (-2181.232) [-2128.720] (-2143.415) (-2307.092) -- 0:27:21
Average standard deviation of split frequencies: 0.050758
396000 -- (-2161.076) (-2147.640) (-2201.427) [-2136.568] * (-2167.083) [-2124.604] (-2142.059) (-2304.054) -- 0:27:19
397000 -- [-2148.850] (-2145.122) (-2181.438) (-2139.028) * (-2175.818) (-2123.168) [-2136.782] (-2285.212) -- 0:27:17
398000 -- (-2151.032) (-2170.539) (-2172.718) [-2137.357] * (-2159.301) (-2137.747) [-2131.663] (-2295.831) -- 0:27:13
399000 -- (-2156.594) (-2159.574) (-2176.452) [-2130.740] * (-2176.434) [-2133.648] (-2137.682) (-2303.104) -- 0:27:11
400000 -- (-2155.191) (-2157.037) (-2197.132) [-2145.358] * (-2176.975) (-2141.979) [-2123.119] (-2316.113) -- 0:27:07
Average standard deviation of split frequencies: 0.051100
401000 -- [-2138.353] (-2165.902) (-2185.633) (-2147.968) * (-2186.149) (-2138.611) [-2130.147] (-2321.845) -- 0:27:05
402000 -- (-2143.733) (-2178.950) (-2167.392) [-2132.056] * (-2167.350) [-2149.156] (-2146.320) (-2323.139) -- 0:27:02
403000 -- [-2134.040] (-2157.605) (-2179.893) (-2137.509) * (-2178.684) (-2155.045) [-2161.348] (-2320.365) -- 0:26:59
404000 -- (-2137.519) (-2186.599) (-2163.561) [-2140.946] * (-2155.073) [-2146.526] (-2167.694) (-2328.610) -- 0:26:56
405000 -- [-2140.429] (-2201.841) (-2180.923) (-2150.202) * (-2176.037) [-2145.630] (-2157.428) (-2332.384) -- 0:26:53
Average standard deviation of split frequencies: 0.051516
406000 -- [-2134.137] (-2214.069) (-2169.913) (-2140.489) * (-2179.760) [-2131.940] (-2147.610) (-2320.537) -- 0:26:50
407000 -- (-2151.415) (-2198.738) (-2181.326) [-2129.491] * (-2166.720) [-2144.200] (-2159.472) (-2316.234) -- 0:26:47
408000 -- [-2134.237] (-2213.692) (-2165.209) (-2134.522) * (-2175.744) (-2146.607) [-2148.654] (-2325.792) -- 0:26:44
409000 -- [-2127.048] (-2211.420) (-2163.671) (-2132.272) * (-2160.514) [-2144.683] (-2160.232) (-2321.809) -- 0:26:41
410000 -- (-2126.724) (-2235.194) (-2172.804) [-2142.938] * (-2182.088) [-2138.851] (-2155.773) (-2322.467) -- 0:26:38
Average standard deviation of split frequencies: 0.052260
411000 -- [-2132.349] (-2218.109) (-2159.985) (-2143.711) * (-2175.594) (-2152.083) [-2148.353] (-2313.316) -- 0:26:35
412000 -- [-2133.007] (-2223.331) (-2147.281) (-2155.674) * (-2181.905) [-2141.155] (-2155.901) (-2318.842) -- 0:26:32
413000 -- (-2140.130) (-2210.466) (-2151.798) [-2141.354] * (-2164.201) [-2140.027] (-2171.419) (-2336.846) -- 0:26:30
414000 -- [-2138.103] (-2196.811) (-2156.085) (-2135.165) * (-2165.739) [-2135.092] (-2176.320) (-2318.839) -- 0:26:26
415000 -- [-2141.634] (-2206.035) (-2167.379) (-2151.357) * (-2152.208) [-2121.740] (-2165.964) (-2300.751) -- 0:26:23
Average standard deviation of split frequencies: 0.051858
416000 -- [-2128.885] (-2175.853) (-2167.010) (-2140.775) * (-2157.854) [-2122.234] (-2152.382) (-2297.527) -- 0:26:20
417000 -- (-2151.016) (-2187.157) [-2152.344] (-2148.005) * (-2171.220) [-2135.809] (-2151.340) (-2315.507) -- 0:26:17
418000 -- (-2135.719) (-2188.877) [-2146.758] (-2154.499) * (-2174.882) [-2133.947] (-2146.637) (-2310.481) -- 0:26:14
419000 -- [-2131.482] (-2193.387) (-2146.097) (-2139.811) * (-2175.490) [-2129.532] (-2140.261) (-2312.623) -- 0:26:11
420000 -- [-2126.349] (-2209.838) (-2132.881) (-2150.921) * (-2181.484) [-2126.716] (-2152.138) (-2319.371) -- 0:26:08
Average standard deviation of split frequencies: 0.051873
421000 -- (-2130.922) (-2184.955) [-2121.652] (-2160.027) * (-2164.410) [-2132.680] (-2159.582) (-2341.348) -- 0:26:05
422000 -- (-2130.809) (-2182.625) (-2159.445) [-2134.271] * (-2182.389) [-2136.391] (-2162.557) (-2316.084) -- 0:26:02
423000 -- [-2129.468] (-2172.955) (-2161.149) (-2135.068) * (-2173.596) [-2139.728] (-2164.500) (-2322.600) -- 0:25:59
424000 -- [-2138.821] (-2196.083) (-2188.084) (-2132.664) * (-2183.956) (-2144.083) [-2149.535] (-2341.141) -- 0:25:56
425000 -- [-2150.395] (-2179.658) (-2168.827) (-2153.453) * (-2188.620) [-2136.234] (-2150.478) (-2344.347) -- 0:25:53
Average standard deviation of split frequencies: 0.050932
426000 -- [-2133.918] (-2208.509) (-2167.308) (-2140.878) * (-2173.092) [-2125.417] (-2166.579) (-2306.666) -- 0:25:50
427000 -- (-2130.263) (-2196.506) (-2175.392) [-2136.781] * (-2174.449) [-2129.916] (-2163.768) (-2296.444) -- 0:25:47
428000 -- (-2136.494) (-2195.508) (-2146.173) [-2139.283] * [-2156.913] (-2127.411) (-2199.825) (-2308.484) -- 0:25:44
429000 -- [-2138.319] (-2195.508) (-2158.169) (-2154.964) * (-2161.185) [-2128.019] (-2180.967) (-2322.674) -- 0:25:42
430000 -- [-2120.515] (-2164.164) (-2140.474) (-2158.600) * (-2173.141) [-2140.225] (-2170.914) (-2314.937) -- 0:25:39
Average standard deviation of split frequencies: 0.051014
431000 -- [-2131.833] (-2165.164) (-2153.006) (-2154.749) * (-2169.782) [-2137.737] (-2184.730) (-2325.610) -- 0:25:35
432000 -- [-2143.001] (-2170.969) (-2143.432) (-2133.261) * (-2172.475) [-2135.059] (-2169.960) (-2304.822) -- 0:25:33
433000 -- (-2142.427) (-2181.836) (-2153.421) [-2134.904] * (-2158.749) [-2125.318] (-2158.180) (-2314.853) -- 0:25:29
434000 -- (-2134.249) (-2185.700) (-2158.151) [-2134.224] * (-2155.523) [-2136.303] (-2144.442) (-2295.530) -- 0:25:27
435000 -- (-2142.873) (-2154.105) (-2163.416) [-2127.740] * (-2149.145) [-2132.624] (-2153.107) (-2304.925) -- 0:25:24
Average standard deviation of split frequencies: 0.050760
436000 -- (-2143.397) (-2148.143) (-2176.917) [-2126.933] * (-2147.237) (-2139.885) [-2143.138] (-2301.509) -- 0:25:21
437000 -- (-2171.179) (-2160.591) (-2145.873) [-2125.750] * (-2154.989) [-2140.463] (-2144.820) (-2322.531) -- 0:25:18
438000 -- (-2190.417) (-2165.477) (-2149.445) [-2135.417] * (-2165.292) [-2137.077] (-2144.054) (-2318.467) -- 0:25:15
439000 -- (-2190.304) (-2153.001) (-2153.720) [-2132.589] * (-2157.774) (-2142.125) [-2141.890] (-2305.214) -- 0:25:13
440000 -- (-2211.387) (-2147.929) (-2163.552) [-2136.249] * (-2161.647) [-2148.818] (-2131.593) (-2335.543) -- 0:25:10
Average standard deviation of split frequencies: 0.050982
441000 -- (-2192.900) (-2154.840) (-2140.281) [-2134.106] * (-2151.745) [-2134.785] (-2128.384) (-2326.119) -- 0:25:07
442000 -- (-2202.002) (-2170.975) [-2122.196] (-2131.605) * (-2168.337) (-2135.646) [-2116.548] (-2331.738) -- 0:25:04
443000 -- (-2196.612) (-2189.437) (-2140.445) [-2137.805] * (-2155.010) (-2153.841) [-2120.669] (-2322.086) -- 0:25:03
444000 -- (-2199.376) (-2174.164) [-2136.017] (-2127.762) * (-2140.827) (-2151.091) [-2123.561] (-2314.570) -- 0:25:01
445000 -- (-2174.979) (-2228.145) (-2128.463) [-2129.334] * (-2136.410) (-2142.524) [-2142.267] (-2325.870) -- 0:24:59
Average standard deviation of split frequencies: 0.051040
446000 -- (-2161.510) (-2204.481) (-2136.779) [-2127.961] * (-2150.403) (-2142.524) [-2130.880] (-2310.428) -- 0:24:55
447000 -- (-2171.521) (-2197.116) [-2149.212] (-2134.546) * [-2160.571] (-2152.810) (-2122.866) (-2328.171) -- 0:24:53
448000 -- (-2177.674) (-2201.126) [-2132.410] (-2148.690) * (-2178.665) (-2156.434) [-2133.963] (-2337.137) -- 0:24:49
449000 -- (-2195.154) (-2176.763) [-2133.320] (-2139.280) * (-2170.553) (-2160.143) [-2126.084] (-2341.065) -- 0:24:47
450000 -- (-2165.522) (-2165.772) (-2132.044) [-2142.062] * (-2162.512) (-2142.979) [-2122.528] (-2346.852) -- 0:24:43
Average standard deviation of split frequencies: 0.051255
451000 -- (-2173.231) (-2152.924) [-2132.879] (-2132.875) * (-2164.748) (-2140.751) [-2128.884] (-2331.713) -- 0:24:41
452000 -- (-2167.721) (-2172.708) (-2128.544) [-2140.948] * (-2164.173) (-2145.785) [-2132.490] (-2331.561) -- 0:24:39
453000 -- (-2161.977) (-2185.064) (-2133.795) [-2126.347] * (-2169.323) (-2152.559) [-2132.571] (-2364.259) -- 0:24:36
454000 -- (-2183.931) (-2195.236) [-2129.468] (-2146.340) * (-2170.840) [-2150.468] (-2120.769) (-2330.122) -- 0:24:35
455000 -- (-2200.203) (-2179.862) [-2143.987] (-2155.496) * (-2160.204) [-2129.930] (-2137.767) (-2341.988) -- 0:24:34
Average standard deviation of split frequencies: 0.052152
456000 -- (-2203.813) (-2184.656) [-2136.251] (-2151.665) * (-2178.727) (-2129.727) [-2145.071] (-2333.837) -- 0:24:33
457000 -- (-2181.796) (-2177.546) (-2141.677) [-2161.010] * (-2172.662) (-2127.797) [-2136.378] (-2333.211) -- 0:24:30
458000 -- (-2168.572) (-2179.803) [-2138.902] (-2147.923) * (-2179.062) (-2142.868) [-2133.948] (-2333.356) -- 0:24:29
459000 -- (-2153.655) (-2183.251) [-2129.993] (-2170.966) * (-2170.631) (-2145.875) [-2137.398] (-2343.634) -- 0:24:28
460000 -- [-2145.685] (-2201.806) (-2134.258) (-2180.944) * (-2178.415) (-2142.644) [-2130.962] (-2347.654) -- 0:24:26
Average standard deviation of split frequencies: 0.053212
461000 -- (-2152.124) (-2179.378) [-2133.867] (-2182.114) * (-2180.047) (-2162.091) [-2128.124] (-2344.225) -- 0:24:25
462000 -- (-2159.198) (-2197.720) [-2134.377] (-2162.466) * (-2178.481) (-2146.464) [-2136.226] (-2329.871) -- 0:24:23
463000 -- (-2146.635) (-2186.705) [-2133.203] (-2168.899) * (-2181.431) (-2146.586) [-2138.170] (-2351.483) -- 0:24:22
464000 -- (-2162.269) (-2191.404) [-2126.035] (-2146.613) * (-2174.969) (-2128.277) [-2117.456] (-2322.787) -- 0:24:21
465000 -- (-2138.294) (-2212.526) [-2134.776] (-2148.706) * (-2172.035) (-2139.088) [-2124.224] (-2309.723) -- 0:24:18
Average standard deviation of split frequencies: 0.052763
466000 -- [-2113.004] (-2222.510) (-2135.440) (-2140.729) * (-2173.148) (-2143.299) [-2115.339] (-2311.794) -- 0:24:17
467000 -- [-2126.973] (-2202.503) (-2134.208) (-2179.513) * (-2155.750) (-2144.716) [-2121.587] (-2306.653) -- 0:24:16
468000 -- (-2127.472) (-2193.891) [-2133.325] (-2169.706) * (-2158.348) (-2146.897) [-2135.623] (-2308.610) -- 0:24:15
469000 -- [-2132.807] (-2198.234) (-2139.657) (-2158.578) * (-2161.559) (-2148.867) [-2132.498] (-2311.352) -- 0:24:12
470000 -- [-2126.981] (-2167.077) (-2151.601) (-2167.157) * (-2188.044) (-2148.704) [-2145.303] (-2312.401) -- 0:24:11
Average standard deviation of split frequencies: 0.052635
471000 -- [-2131.588] (-2171.968) (-2132.316) (-2162.931) * (-2183.664) (-2175.213) [-2145.429] (-2301.527) -- 0:24:09
472000 -- (-2145.017) (-2179.242) [-2127.181] (-2154.692) * (-2181.576) (-2160.943) [-2129.987] (-2308.622) -- 0:24:08
473000 -- [-2146.857] (-2174.076) (-2150.439) (-2176.591) * (-2182.588) (-2173.807) [-2130.765] (-2311.028) -- 0:24:07
474000 -- [-2137.049] (-2183.164) (-2173.829) (-2170.076) * (-2158.361) (-2175.196) [-2141.487] (-2317.345) -- 0:24:04
475000 -- (-2140.978) (-2174.115) [-2168.261] (-2179.374) * (-2163.608) (-2170.885) [-2134.122] (-2304.039) -- 0:24:03
Average standard deviation of split frequencies: 0.052254
476000 -- [-2125.603] (-2162.830) (-2141.406) (-2179.174) * [-2148.235] (-2169.810) (-2143.711) (-2302.805) -- 0:24:02
477000 -- [-2131.269] (-2175.778) (-2141.471) (-2175.208) * [-2141.678] (-2178.850) (-2141.282) (-2308.102) -- 0:23:58
478000 -- (-2149.083) (-2187.890) [-2136.355] (-2171.636) * [-2151.276] (-2174.602) (-2141.372) (-2311.070) -- 0:23:56
479000 -- [-2129.082] (-2173.892) (-2151.217) (-2184.023) * [-2146.226] (-2147.305) (-2173.059) (-2324.648) -- 0:23:53
480000 -- (-2137.162) (-2169.907) [-2151.345] (-2190.856) * (-2132.050) (-2155.485) [-2140.582] (-2319.186) -- 0:23:50
Average standard deviation of split frequencies: 0.051375
481000 -- [-2138.671] (-2159.154) (-2153.820) (-2202.971) * (-2137.156) [-2150.437] (-2151.561) (-2312.288) -- 0:23:47
482000 -- [-2148.856] (-2150.125) (-2166.599) (-2186.648) * (-2144.928) (-2169.486) [-2143.071] (-2313.168) -- 0:23:43
483000 -- [-2150.961] (-2155.012) (-2176.755) (-2170.158) * (-2151.121) (-2168.473) [-2142.857] (-2324.056) -- 0:23:41
484000 -- [-2150.038] (-2169.201) (-2169.616) (-2189.650) * [-2129.336] (-2179.834) (-2146.187) (-2321.349) -- 0:23:39
485000 -- [-2140.535] (-2170.252) (-2161.842) (-2162.008) * [-2126.632] (-2166.616) (-2149.398) (-2308.356) -- 0:23:35
Average standard deviation of split frequencies: 0.051434
486000 -- [-2130.964] (-2187.229) (-2169.918) (-2157.170) * [-2136.132] (-2173.838) (-2157.569) (-2319.673) -- 0:23:32
487000 -- [-2132.573] (-2183.688) (-2170.879) (-2148.129) * [-2146.616] (-2152.244) (-2166.565) (-2302.518) -- 0:23:29
488000 -- [-2130.599] (-2182.175) (-2170.657) (-2147.766) * (-2155.391) [-2155.043] (-2158.545) (-2313.726) -- 0:23:26
489000 -- [-2146.258] (-2196.057) (-2171.317) (-2134.008) * (-2177.704) (-2155.883) [-2134.825] (-2325.086) -- 0:23:24
490000 -- [-2122.469] (-2185.269) (-2142.749) (-2140.120) * (-2166.658) (-2160.318) [-2128.387] (-2327.983) -- 0:23:20
Average standard deviation of split frequencies: 0.050060
491000 -- (-2130.736) (-2202.193) (-2146.691) [-2145.738] * (-2154.677) (-2159.412) [-2131.672] (-2332.607) -- 0:23:18
492000 -- (-2139.816) (-2195.362) (-2153.572) [-2139.579] * (-2145.376) (-2146.608) [-2127.593] (-2332.214) -- 0:23:15
493000 -- (-2145.354) (-2202.417) (-2170.712) [-2140.186] * [-2143.344] (-2151.284) (-2133.421) (-2303.466) -- 0:23:14
494000 -- (-2141.845) (-2190.063) (-2181.549) [-2128.360] * (-2143.955) (-2138.432) [-2126.929] (-2316.818) -- 0:23:13
495000 -- (-2140.624) (-2197.320) (-2150.265) [-2136.211] * (-2147.273) (-2150.061) [-2139.505] (-2310.173) -- 0:23:11
Average standard deviation of split frequencies: 0.049647
496000 -- (-2134.019) (-2201.603) (-2154.629) [-2138.727] * (-2150.721) (-2152.975) [-2136.606] (-2312.209) -- 0:23:10
497000 -- [-2131.592] (-2192.770) (-2171.178) (-2149.775) * (-2153.551) (-2174.679) [-2129.409] (-2307.556) -- 0:23:07
498000 -- (-2149.396) (-2168.352) (-2168.445) [-2130.673] * (-2155.287) (-2150.373) [-2128.144] (-2335.439) -- 0:23:06
499000 -- [-2134.098] (-2181.027) (-2170.591) (-2135.505) * (-2150.513) (-2149.332) [-2128.920] (-2322.099) -- 0:23:04
500000 -- [-2141.344] (-2176.526) (-2162.404) (-2153.254) * (-2132.882) (-2143.879) [-2118.840] (-2318.314) -- 0:23:02
Average standard deviation of split frequencies: 0.049233
501000 -- [-2147.325] (-2163.846) (-2169.286) (-2193.225) * (-2134.709) (-2148.133) [-2119.049] (-2331.544) -- 0:23:00
502000 -- [-2151.577] (-2150.961) (-2177.920) (-2170.499) * (-2141.885) (-2139.547) [-2118.731] (-2320.587) -- 0:22:57
503000 -- [-2151.500] (-2159.042) (-2153.861) (-2197.196) * [-2143.362] (-2162.359) (-2123.149) (-2301.068) -- 0:22:55
504000 -- (-2153.605) (-2151.200) [-2156.128] (-2191.981) * (-2148.944) (-2152.907) [-2118.238] (-2315.581) -- 0:22:51
505000 -- [-2145.709] (-2165.869) (-2155.145) (-2193.151) * (-2172.923) [-2141.218] (-2131.683) (-2299.808) -- 0:22:49
Average standard deviation of split frequencies: 0.048420
506000 -- (-2144.401) [-2140.986] (-2193.674) (-2217.252) * (-2172.970) (-2150.638) [-2127.558] (-2315.986) -- 0:22:46
507000 -- [-2143.770] (-2142.378) (-2192.159) (-2190.148) * (-2140.089) (-2177.484) [-2133.107] (-2307.452) -- 0:22:44
508000 -- [-2138.736] (-2139.519) (-2202.733) (-2182.209) * (-2141.427) (-2160.520) [-2122.534] (-2309.529) -- 0:22:40
509000 -- (-2165.838) [-2138.977] (-2183.200) (-2187.905) * (-2149.698) (-2151.151) [-2123.308] (-2308.484) -- 0:22:38
510000 -- (-2180.644) [-2147.464] (-2199.738) (-2150.794) * (-2149.748) (-2150.224) [-2120.471] (-2288.561) -- 0:22:34
Average standard deviation of split frequencies: 0.048488
511000 -- (-2210.914) (-2142.948) (-2176.236) [-2148.492] * [-2150.457] (-2154.518) (-2143.208) (-2310.317) -- 0:22:32
512000 -- (-2188.101) [-2133.851] (-2161.809) (-2156.196) * [-2141.632] (-2160.399) (-2137.076) (-2315.960) -- 0:22:29
513000 -- (-2181.762) (-2151.864) (-2184.849) [-2154.499] * (-2130.384) (-2162.624) [-2133.325] (-2321.314) -- 0:22:26
514000 -- (-2166.664) (-2166.593) (-2168.954) [-2156.280] * (-2137.412) (-2158.436) [-2131.120] (-2317.013) -- 0:22:23
515000 -- [-2143.185] (-2166.315) (-2182.212) (-2155.475) * (-2136.127) (-2178.783) [-2133.317] (-2302.747) -- 0:22:20
Average standard deviation of split frequencies: 0.049309
516000 -- [-2142.114] (-2169.115) (-2148.104) (-2167.753) * (-2145.109) (-2174.509) [-2122.518] (-2299.045) -- 0:22:17
517000 -- [-2142.053] (-2186.109) (-2163.197) (-2159.385) * (-2173.203) (-2168.781) [-2132.265] (-2298.678) -- 0:22:15
518000 -- [-2125.468] (-2169.979) (-2152.500) (-2179.431) * (-2162.435) (-2169.938) [-2141.197] (-2307.666) -- 0:22:11
519000 -- (-2145.037) (-2173.738) [-2151.180] (-2178.676) * (-2179.693) (-2162.755) [-2144.750] (-2297.873) -- 0:22:09
520000 -- [-2139.059] (-2177.522) (-2158.313) (-2178.911) * (-2170.103) (-2153.332) [-2128.636] (-2313.908) -- 0:22:06
Average standard deviation of split frequencies: 0.048367
521000 -- (-2150.718) (-2186.463) [-2139.668] (-2167.212) * (-2179.562) (-2143.114) [-2149.388] (-2323.283) -- 0:22:04
522000 -- (-2144.247) (-2158.333) [-2131.398] (-2172.091) * (-2170.729) (-2141.877) [-2149.129] (-2315.465) -- 0:22:02
523000 -- [-2141.368] (-2168.517) (-2136.707) (-2176.703) * (-2185.820) [-2128.991] (-2153.467) (-2310.042) -- 0:22:00
524000 -- (-2155.970) (-2160.449) [-2140.848] (-2179.562) * (-2180.833) [-2128.619] (-2149.890) (-2307.262) -- 0:21:58
525000 -- [-2143.658] (-2182.418) (-2163.707) (-2214.209) * (-2170.204) [-2127.262] (-2139.573) (-2312.531) -- 0:21:57
Average standard deviation of split frequencies: 0.047688
526000 -- [-2150.137] (-2192.608) (-2168.856) (-2183.899) * (-2165.819) (-2143.469) [-2141.822] (-2322.563) -- 0:21:54
527000 -- (-2144.855) (-2157.763) [-2133.246] (-2195.891) * (-2164.109) (-2123.735) [-2130.221] (-2325.871) -- 0:21:53
528000 -- (-2149.255) (-2151.961) [-2142.728] (-2212.019) * (-2171.989) (-2135.547) [-2132.967] (-2327.342) -- 0:21:51
529000 -- [-2138.249] (-2169.608) (-2143.579) (-2220.983) * (-2178.610) (-2133.444) [-2147.146] (-2316.651) -- 0:21:48
530000 -- [-2137.101] (-2154.808) (-2163.162) (-2233.201) * (-2177.019) (-2134.852) [-2146.614] (-2308.461) -- 0:21:47
Average standard deviation of split frequencies: 0.047596
531000 -- (-2140.655) [-2136.102] (-2163.164) (-2219.726) * (-2183.600) [-2129.026] (-2172.610) (-2307.909) -- 0:21:45
532000 -- [-2131.065] (-2141.873) (-2158.928) (-2221.958) * (-2182.016) [-2129.999] (-2160.327) (-2290.232) -- 0:21:42
533000 -- [-2149.112] (-2142.620) (-2173.347) (-2201.171) * (-2197.124) (-2136.533) [-2142.997] (-2300.934) -- 0:21:41
534000 -- (-2141.063) [-2136.966] (-2175.119) (-2198.137) * (-2184.018) [-2134.715] (-2149.522) (-2302.767) -- 0:21:38
535000 -- [-2140.886] (-2141.392) (-2172.506) (-2180.009) * (-2178.471) [-2127.058] (-2139.771) (-2311.413) -- 0:21:35
Average standard deviation of split frequencies: 0.046793
536000 -- [-2129.974] (-2168.940) (-2168.037) (-2201.861) * (-2184.296) (-2127.801) [-2136.132] (-2301.264) -- 0:21:32
537000 -- [-2131.533] (-2202.918) (-2179.492) (-2169.745) * (-2194.305) (-2138.067) [-2140.543] (-2313.574) -- 0:21:29
538000 -- (-2135.967) (-2193.642) (-2182.026) [-2162.856] * (-2185.051) [-2123.562] (-2148.168) (-2310.039) -- 0:21:27
539000 -- (-2138.484) (-2180.312) (-2198.000) [-2166.105] * (-2193.218) [-2122.175] (-2135.504) (-2296.625) -- 0:21:23
540000 -- [-2133.544] (-2174.645) (-2184.873) (-2164.050) * (-2178.497) (-2132.379) [-2144.637] (-2302.529) -- 0:21:21
Average standard deviation of split frequencies: 0.047197
541000 -- [-2139.503] (-2195.193) (-2172.634) (-2152.417) * (-2167.386) [-2135.557] (-2142.504) (-2292.245) -- 0:21:17
542000 -- [-2147.145] (-2207.338) (-2156.573) (-2156.131) * (-2185.838) (-2134.006) [-2132.310] (-2318.588) -- 0:21:15
543000 -- [-2151.505] (-2220.243) (-2172.733) (-2156.349) * (-2189.544) [-2130.664] (-2129.155) (-2303.812) -- 0:21:11
544000 -- [-2138.278] (-2217.505) (-2167.486) (-2153.243) * (-2202.301) [-2144.900] (-2141.215) (-2296.608) -- 0:21:09
545000 -- (-2148.593) (-2209.071) [-2161.693] (-2167.315) * (-2183.320) [-2143.383] (-2128.628) (-2308.780) -- 0:21:06
Average standard deviation of split frequencies: 0.046463
546000 -- [-2144.251] (-2206.446) (-2180.361) (-2164.228) * (-2186.736) (-2159.015) [-2135.718] (-2300.687) -- 0:21:03
547000 -- [-2138.421] (-2202.533) (-2160.868) (-2173.448) * (-2175.316) (-2155.623) [-2157.524] (-2289.243) -- 0:21:00
548000 -- [-2131.869] (-2216.631) (-2163.980) (-2182.049) * (-2165.768) [-2147.187] (-2145.964) (-2298.524) -- 0:20:58
549000 -- [-2136.853] (-2214.564) (-2145.556) (-2188.115) * (-2156.545) (-2154.077) [-2148.389] (-2316.129) -- 0:20:56
550000 -- (-2144.096) (-2228.350) [-2149.871] (-2187.986) * (-2166.529) [-2136.505] (-2142.935) (-2298.138) -- 0:20:54
Average standard deviation of split frequencies: 0.046070
551000 -- [-2147.599] (-2215.549) (-2140.226) (-2199.840) * (-2198.035) (-2148.583) [-2137.249] (-2299.127) -- 0:20:52
552000 -- [-2134.961] (-2208.832) (-2139.755) (-2176.652) * (-2186.814) (-2156.696) [-2140.497] (-2299.405) -- 0:20:50
553000 -- [-2130.438] (-2214.102) (-2156.609) (-2178.946) * (-2190.194) (-2158.072) [-2134.494] (-2292.760) -- 0:20:48
554000 -- (-2151.549) (-2215.949) [-2150.678] (-2184.700) * (-2151.074) [-2152.343] (-2139.043) (-2305.382) -- 0:20:46
555000 -- (-2153.740) (-2200.070) [-2142.695] (-2182.993) * (-2151.668) (-2152.179) [-2138.413] (-2324.307) -- 0:20:44
Average standard deviation of split frequencies: 0.045583
556000 -- (-2168.179) (-2187.992) [-2144.859] (-2161.216) * (-2150.290) (-2164.206) [-2135.716] (-2328.062) -- 0:20:41
557000 -- (-2175.365) (-2222.285) (-2143.630) [-2149.323] * [-2139.461] (-2148.508) (-2145.727) (-2309.232) -- 0:20:39
558000 -- (-2159.601) (-2207.352) [-2156.308] (-2168.863) * [-2145.465] (-2161.965) (-2141.636) (-2318.059) -- 0:20:37
559000 -- (-2171.776) (-2203.319) [-2147.207] (-2153.244) * [-2153.341] (-2150.133) (-2137.591) (-2316.298) -- 0:20:35
560000 -- (-2171.125) (-2227.923) [-2149.828] (-2148.604) * [-2130.195] (-2164.013) (-2128.976) (-2320.925) -- 0:20:33
Average standard deviation of split frequencies: 0.044628
561000 -- (-2182.652) (-2203.027) [-2156.131] (-2158.851) * [-2128.641] (-2171.007) (-2119.015) (-2329.939) -- 0:20:30
562000 -- (-2190.149) (-2193.447) (-2157.309) [-2144.183] * (-2139.445) (-2171.579) [-2122.588] (-2340.525) -- 0:20:28
563000 -- (-2165.627) (-2197.216) (-2157.048) [-2136.907] * (-2138.231) (-2156.844) [-2119.588] (-2349.893) -- 0:20:25
564000 -- (-2163.552) (-2192.505) (-2142.034) [-2132.626] * [-2127.336] (-2180.892) (-2135.366) (-2358.501) -- 0:20:22
565000 -- (-2171.872) (-2180.613) (-2156.125) [-2127.656] * (-2134.881) (-2168.310) [-2122.828] (-2354.384) -- 0:20:20
Average standard deviation of split frequencies: 0.043616
566000 -- (-2207.293) (-2174.740) (-2154.084) [-2126.223] * (-2136.126) (-2162.379) [-2131.013] (-2334.300) -- 0:20:16
567000 -- (-2192.522) (-2182.275) (-2139.664) [-2130.684] * [-2142.114] (-2167.041) (-2138.061) (-2326.777) -- 0:20:14
568000 -- (-2195.949) (-2180.691) (-2145.078) [-2123.599] * (-2159.942) (-2169.741) [-2148.629] (-2332.975) -- 0:20:10
569000 -- (-2192.982) (-2178.564) (-2147.116) [-2125.493] * (-2145.655) (-2167.440) [-2137.796] (-2326.320) -- 0:20:08
570000 -- (-2189.389) (-2166.000) (-2155.276) [-2127.637] * (-2151.399) (-2166.715) [-2144.623] (-2324.814) -- 0:20:04
Average standard deviation of split frequencies: 0.042890
571000 -- (-2174.040) (-2163.432) (-2177.248) [-2128.692] * (-2138.155) (-2147.515) [-2132.829] (-2331.201) -- 0:20:01
572000 -- (-2182.703) (-2182.481) (-2182.344) [-2124.361] * [-2131.905] (-2156.045) (-2141.410) (-2340.244) -- 0:19:58
573000 -- (-2174.899) (-2183.624) (-2158.965) [-2124.231] * [-2130.845] (-2167.890) (-2150.796) (-2336.688) -- 0:19:56
574000 -- (-2172.873) [-2157.818] (-2185.814) (-2138.173) * (-2133.045) (-2167.586) [-2144.773] (-2323.560) -- 0:19:54
575000 -- (-2169.719) (-2185.476) (-2156.433) [-2126.667] * (-2140.780) (-2156.747) [-2125.090] (-2317.246) -- 0:19:52
Average standard deviation of split frequencies: 0.043010
576000 -- (-2152.753) (-2176.854) (-2170.286) [-2142.931] * (-2137.366) (-2174.227) [-2129.362] (-2317.948) -- 0:19:49
577000 -- (-2172.546) (-2192.030) (-2152.883) [-2139.575] * (-2133.586) (-2183.781) [-2133.647] (-2300.998) -- 0:19:47
578000 -- (-2181.000) (-2192.757) (-2155.197) [-2149.779] * (-2136.058) (-2188.286) [-2152.301] (-2313.668) -- 0:19:45
579000 -- (-2174.632) [-2152.833] (-2152.035) (-2158.688) * (-2133.695) (-2169.410) [-2139.624] (-2321.790) -- 0:19:43
580000 -- (-2178.339) (-2154.315) [-2134.291] (-2161.672) * [-2133.237] (-2157.015) (-2146.197) (-2319.125) -- 0:19:41
Average standard deviation of split frequencies: 0.042579
581000 -- (-2187.655) [-2151.135] (-2135.040) (-2160.256) * (-2143.168) [-2134.112] (-2157.632) (-2315.085) -- 0:19:39
582000 -- (-2175.594) (-2161.138) [-2137.772] (-2146.418) * (-2133.096) [-2133.536] (-2160.670) (-2305.299) -- 0:19:37
583000 -- (-2171.975) (-2220.781) [-2135.190] (-2153.024) * (-2132.188) [-2132.112] (-2158.943) (-2306.061) -- 0:19:34
584000 -- (-2179.553) (-2233.095) (-2150.443) [-2150.606] * (-2132.080) [-2148.627] (-2156.114) (-2303.191) -- 0:19:32
585000 -- (-2164.475) (-2211.504) (-2150.994) [-2145.459] * [-2135.261] (-2139.976) (-2169.698) (-2321.711) -- 0:19:30
Average standard deviation of split frequencies: 0.042784
586000 -- (-2154.494) (-2196.061) (-2160.874) [-2129.191] * [-2128.254] (-2147.272) (-2149.836) (-2318.756) -- 0:19:28
587000 -- (-2166.890) (-2180.785) [-2140.848] (-2136.792) * [-2118.326] (-2151.389) (-2156.641) (-2314.904) -- 0:19:26
588000 -- (-2179.364) (-2195.813) [-2131.174] (-2140.785) * [-2127.163] (-2159.606) (-2141.352) (-2318.553) -- 0:19:23
589000 -- (-2156.475) (-2201.989) [-2119.411] (-2149.771) * [-2131.041] (-2139.129) (-2152.217) (-2328.244) -- 0:19:21
590000 -- (-2154.007) (-2201.852) [-2125.145] (-2134.267) * (-2142.732) [-2131.496] (-2167.947) (-2341.358) -- 0:19:19
Average standard deviation of split frequencies: 0.043181
591000 -- (-2126.597) (-2224.348) [-2122.330] (-2161.288) * (-2151.146) [-2126.942] (-2161.615) (-2328.636) -- 0:19:17
592000 -- (-2144.348) (-2219.607) [-2126.928] (-2163.067) * (-2145.265) [-2125.916] (-2150.018) (-2340.557) -- 0:19:15
593000 -- (-2143.412) (-2188.825) [-2140.140] (-2204.337) * (-2140.812) [-2141.622] (-2146.285) (-2331.811) -- 0:19:13
594000 -- (-2159.960) (-2187.697) [-2133.249] (-2166.421) * [-2128.127] (-2142.924) (-2144.491) (-2340.651) -- 0:19:10
595000 -- (-2167.535) (-2177.738) [-2130.537] (-2173.252) * (-2158.708) (-2147.703) [-2142.853] (-2339.576) -- 0:19:08
Average standard deviation of split frequencies: 0.043107
596000 -- (-2170.275) (-2179.344) [-2143.885] (-2165.250) * (-2138.554) (-2146.283) [-2138.448] (-2335.194) -- 0:19:05
597000 -- (-2160.786) (-2174.118) [-2145.348] (-2174.713) * [-2138.602] (-2137.569) (-2148.665) (-2314.303) -- 0:19:03
598000 -- (-2140.976) (-2156.192) [-2141.720] (-2167.408) * (-2151.923) [-2133.647] (-2131.375) (-2327.880) -- 0:19:01
599000 -- (-2140.506) (-2160.853) [-2146.785] (-2196.109) * (-2149.210) [-2133.840] (-2142.877) (-2326.029) -- 0:18:58
600000 -- [-2134.157] (-2180.563) (-2138.528) (-2191.036) * [-2136.250] (-2160.357) (-2140.766) (-2335.157) -- 0:18:55
Average standard deviation of split frequencies: 0.043598
601000 -- [-2131.363] (-2198.313) (-2137.122) (-2204.170) * (-2144.076) [-2155.131] (-2150.866) (-2327.688) -- 0:18:53
602000 -- [-2124.325] (-2175.573) (-2130.875) (-2171.983) * [-2146.532] (-2148.776) (-2133.974) (-2312.746) -- 0:18:51
603000 -- [-2127.020] (-2162.001) (-2173.230) (-2165.719) * (-2149.152) (-2141.855) [-2143.348] (-2311.077) -- 0:18:48
604000 -- [-2128.257] (-2167.763) (-2186.745) (-2160.500) * (-2140.604) (-2151.567) [-2144.280] (-2311.910) -- 0:18:46
605000 -- [-2118.392] (-2151.931) (-2188.928) (-2155.459) * (-2160.441) [-2141.674] (-2149.615) (-2317.182) -- 0:18:44
Average standard deviation of split frequencies: 0.043787
606000 -- [-2125.056] (-2197.916) (-2187.972) (-2157.444) * [-2148.023] (-2177.416) (-2146.611) (-2318.292) -- 0:18:41
607000 -- (-2140.217) (-2188.527) (-2162.652) [-2152.181] * (-2148.169) (-2150.800) [-2145.309] (-2323.189) -- 0:18:39
608000 -- (-2154.752) (-2155.290) (-2199.930) [-2159.096] * (-2179.325) (-2144.345) [-2139.977] (-2326.891) -- 0:18:37
609000 -- [-2149.570] (-2154.876) (-2187.880) (-2154.318) * (-2162.009) (-2145.571) [-2132.693] (-2314.911) -- 0:18:34
610000 -- [-2137.690] (-2168.733) (-2208.844) (-2167.359) * [-2145.886] (-2159.014) (-2143.601) (-2308.315) -- 0:18:32
Average standard deviation of split frequencies: 0.043626
611000 -- [-2130.421] (-2165.191) (-2208.749) (-2167.584) * (-2168.154) [-2145.741] (-2155.620) (-2315.704) -- 0:18:30
612000 -- [-2140.816] (-2155.746) (-2213.463) (-2153.104) * (-2166.244) [-2125.007] (-2141.256) (-2328.438) -- 0:18:27
613000 -- [-2128.567] (-2155.659) (-2184.528) (-2185.332) * (-2159.084) [-2126.990] (-2170.118) (-2316.116) -- 0:18:25
614000 -- (-2147.029) [-2162.375] (-2159.884) (-2182.683) * [-2146.862] (-2135.149) (-2161.569) (-2307.390) -- 0:18:23
615000 -- [-2140.633] (-2195.994) (-2175.742) (-2150.106) * (-2162.088) (-2157.384) [-2147.409] (-2304.336) -- 0:18:20
Average standard deviation of split frequencies: 0.043227
616000 -- (-2140.870) (-2188.568) (-2167.327) [-2144.209] * (-2181.796) [-2166.158] (-2152.856) (-2308.872) -- 0:18:18
617000 -- [-2144.312] (-2170.070) (-2179.209) (-2145.417) * [-2166.625] (-2166.735) (-2173.573) (-2312.295) -- 0:18:15
618000 -- (-2146.588) (-2176.695) (-2210.331) [-2136.091] * [-2153.828] (-2163.741) (-2175.389) (-2312.747) -- 0:18:13
619000 -- (-2140.526) (-2176.953) (-2176.514) [-2125.890] * [-2137.834] (-2162.707) (-2176.302) (-2314.491) -- 0:18:11
620000 -- (-2154.220) (-2196.638) (-2188.413) [-2129.869] * (-2137.868) [-2149.327] (-2163.825) (-2303.693) -- 0:18:08
Average standard deviation of split frequencies: 0.042779
621000 -- (-2170.191) (-2181.467) (-2200.838) [-2132.109] * [-2135.973] (-2157.127) (-2162.258) (-2307.783) -- 0:18:06
622000 -- (-2152.315) (-2177.046) (-2204.199) [-2130.844] * [-2139.168] (-2155.190) (-2163.613) (-2316.908) -- 0:18:04
623000 -- (-2163.166) (-2177.923) (-2237.805) [-2118.866] * (-2145.851) [-2151.794] (-2161.825) (-2316.255) -- 0:18:01
624000 -- (-2146.617) (-2161.563) (-2187.529) [-2119.805] * (-2166.653) [-2148.152] (-2183.429) (-2320.544) -- 0:17:59
625000 -- (-2148.468) (-2168.859) (-2201.875) [-2126.709] * (-2137.756) [-2128.025] (-2167.402) (-2304.482) -- 0:17:57
Average standard deviation of split frequencies: 0.042435
626000 -- (-2153.982) (-2189.566) (-2193.651) [-2122.498] * [-2156.216] (-2120.510) (-2163.967) (-2321.996) -- 0:17:54
627000 -- [-2141.624] (-2182.345) (-2185.403) (-2111.567) * (-2152.495) [-2123.792] (-2153.483) (-2301.735) -- 0:17:52
628000 -- (-2151.552) (-2176.238) (-2195.504) [-2125.955] * [-2139.695] (-2119.965) (-2162.783) (-2288.894) -- 0:17:49
629000 -- (-2166.586) (-2181.246) (-2194.747) [-2131.677] * [-2133.121] (-2139.914) (-2161.087) (-2296.571) -- 0:17:47
630000 -- [-2147.045] (-2174.545) (-2225.711) (-2135.464) * [-2140.579] (-2146.551) (-2158.936) (-2296.045) -- 0:17:44
Average standard deviation of split frequencies: 0.041111
631000 -- (-2154.983) (-2189.172) (-2231.196) [-2130.018] * [-2144.535] (-2140.471) (-2155.411) (-2313.160) -- 0:17:42
632000 -- (-2148.366) (-2175.635) (-2234.627) [-2119.364] * [-2138.409] (-2134.207) (-2163.348) (-2314.567) -- 0:17:39
633000 -- [-2139.489] (-2199.183) (-2222.246) (-2137.007) * [-2125.579] (-2144.940) (-2176.348) (-2312.842) -- 0:17:37
634000 -- (-2142.479) (-2188.771) (-2205.629) [-2128.237] * [-2143.471] (-2151.756) (-2178.575) (-2342.439) -- 0:17:35
635000 -- (-2143.671) (-2206.270) (-2190.481) [-2133.618] * [-2145.843] (-2157.265) (-2181.405) (-2319.075) -- 0:17:33
Average standard deviation of split frequencies: 0.040526
636000 -- (-2139.609) (-2197.871) (-2153.476) [-2136.373] * (-2146.002) [-2135.380] (-2186.437) (-2334.648) -- 0:17:30
637000 -- (-2145.754) (-2182.189) (-2143.103) [-2125.908] * (-2139.932) [-2133.546] (-2171.775) (-2330.837) -- 0:17:27
638000 -- (-2145.380) (-2205.012) [-2141.028] (-2142.692) * (-2140.448) [-2120.253] (-2167.864) (-2323.718) -- 0:17:25
639000 -- (-2183.455) (-2181.944) (-2143.946) [-2138.651] * (-2140.957) [-2125.891] (-2178.980) (-2310.450) -- 0:17:22
640000 -- [-2135.126] (-2200.164) (-2138.087) (-2149.695) * [-2149.810] (-2126.024) (-2184.813) (-2324.984) -- 0:17:20
Average standard deviation of split frequencies: 0.039634
641000 -- [-2148.414] (-2197.296) (-2142.758) (-2146.916) * (-2146.072) [-2130.079] (-2171.549) (-2313.485) -- 0:17:17
642000 -- (-2143.874) (-2192.531) (-2158.126) [-2153.872] * [-2133.374] (-2145.476) (-2166.414) (-2330.372) -- 0:17:15
643000 -- [-2144.128] (-2187.780) (-2145.814) (-2160.865) * (-2133.519) [-2139.569] (-2189.571) (-2322.695) -- 0:17:13
644000 -- [-2143.753] (-2150.195) (-2151.439) (-2192.415) * (-2149.405) [-2142.699] (-2169.978) (-2310.326) -- 0:17:10
645000 -- [-2140.709] (-2143.380) (-2150.745) (-2185.087) * (-2141.873) [-2134.954] (-2167.771) (-2308.410) -- 0:17:08
Average standard deviation of split frequencies: 0.039050
646000 -- [-2119.078] (-2145.346) (-2159.383) (-2174.004) * [-2132.395] (-2128.597) (-2166.328) (-2313.901) -- 0:17:05
647000 -- (-2127.324) [-2141.107] (-2149.669) (-2195.949) * (-2150.820) [-2139.672] (-2157.107) (-2338.629) -- 0:17:02
648000 -- (-2130.906) [-2126.033] (-2160.125) (-2196.498) * [-2159.085] (-2136.736) (-2157.767) (-2307.426) -- 0:17:00
649000 -- (-2128.097) [-2137.567] (-2156.657) (-2196.522) * (-2172.532) [-2145.857] (-2150.344) (-2305.988) -- 0:16:57
650000 -- [-2117.597] (-2145.735) (-2164.630) (-2195.117) * (-2144.763) [-2139.881] (-2159.806) (-2301.947) -- 0:16:55
Average standard deviation of split frequencies: 0.038457
651000 -- [-2126.084] (-2171.882) (-2162.142) (-2177.271) * (-2141.993) [-2135.895] (-2169.232) (-2316.803) -- 0:16:53
652000 -- [-2121.034] (-2179.199) (-2150.936) (-2163.823) * (-2132.476) [-2127.523] (-2157.890) (-2312.513) -- 0:16:50
653000 -- [-2142.535] (-2183.079) (-2159.424) (-2166.459) * (-2142.309) [-2134.675] (-2172.683) (-2325.906) -- 0:16:48
654000 -- (-2154.502) (-2193.093) (-2174.024) [-2153.862] * (-2145.915) [-2137.891] (-2164.409) (-2312.925) -- 0:16:45
655000 -- (-2163.904) (-2187.206) [-2139.688] (-2146.350) * (-2135.430) [-2139.763] (-2175.705) (-2306.711) -- 0:16:42
Average standard deviation of split frequencies: 0.038046
656000 -- (-2165.419) (-2168.110) (-2138.545) [-2124.309] * (-2125.366) [-2140.185] (-2164.717) (-2307.702) -- 0:16:40
657000 -- (-2149.597) (-2168.116) [-2139.585] (-2130.510) * [-2139.512] (-2152.491) (-2164.518) (-2317.558) -- 0:16:38
658000 -- (-2140.925) (-2164.141) (-2156.107) [-2142.219] * [-2146.345] (-2155.619) (-2154.967) (-2296.030) -- 0:16:35
659000 -- (-2159.036) (-2151.426) (-2174.757) [-2133.005] * (-2135.058) [-2150.546] (-2165.265) (-2289.404) -- 0:16:32
660000 -- (-2152.035) (-2141.946) (-2158.473) [-2132.091] * (-2140.582) (-2172.945) [-2140.825] (-2311.455) -- 0:16:29
Average standard deviation of split frequencies: 0.037183
661000 -- [-2137.737] (-2148.912) (-2185.780) (-2139.871) * [-2134.364] (-2177.073) (-2140.999) (-2305.571) -- 0:16:25
662000 -- (-2147.744) [-2135.636] (-2141.703) (-2144.071) * [-2134.942] (-2165.846) (-2174.706) (-2299.457) -- 0:16:22
663000 -- (-2164.665) (-2142.725) [-2133.510] (-2150.431) * [-2148.400] (-2154.824) (-2159.494) (-2304.412) -- 0:16:19
664000 -- (-2165.517) (-2158.824) (-2141.465) [-2142.333] * [-2145.506] (-2153.427) (-2166.924) (-2318.967) -- 0:16:16
665000 -- (-2150.377) (-2168.623) [-2133.010] (-2155.027) * [-2149.355] (-2147.236) (-2182.789) (-2332.283) -- 0:16:13
Average standard deviation of split frequencies: 0.036551
666000 -- (-2165.964) (-2178.286) [-2132.819] (-2137.846) * [-2132.372] (-2155.629) (-2176.975) (-2304.475) -- 0:16:10
667000 -- (-2163.455) (-2167.378) [-2135.945] (-2162.621) * [-2131.921] (-2144.092) (-2175.727) (-2303.637) -- 0:16:07
668000 -- (-2154.070) [-2159.679] (-2135.807) (-2183.037) * (-2133.796) [-2141.540] (-2169.398) (-2314.995) -- 0:16:04
669000 -- (-2142.518) (-2183.485) (-2137.164) [-2124.942] * [-2119.163] (-2148.997) (-2171.849) (-2310.656) -- 0:16:00
670000 -- (-2152.355) (-2178.777) (-2144.548) [-2132.571] * [-2118.759] (-2138.558) (-2158.934) (-2307.218) -- 0:15:57
Average standard deviation of split frequencies: 0.036043
671000 -- (-2152.704) (-2184.324) (-2167.055) [-2129.604] * [-2130.283] (-2142.614) (-2162.052) (-2313.758) -- 0:15:54
672000 -- (-2141.579) (-2185.312) (-2143.174) [-2122.737] * (-2145.654) [-2133.259] (-2161.632) (-2310.990) -- 0:15:52
673000 -- (-2141.692) (-2190.104) (-2150.968) [-2132.172] * [-2133.158] (-2139.111) (-2156.546) (-2312.044) -- 0:15:49
674000 -- (-2172.004) (-2145.909) (-2143.974) [-2136.882] * (-2147.846) [-2130.818] (-2149.441) (-2307.043) -- 0:15:47
675000 -- [-2144.301] (-2153.542) (-2147.537) (-2169.401) * (-2150.566) [-2125.121] (-2153.059) (-2310.657) -- 0:15:44
Average standard deviation of split frequencies: 0.035836
676000 -- (-2151.686) [-2147.667] (-2145.641) (-2159.594) * (-2163.480) [-2119.129] (-2155.838) (-2310.728) -- 0:15:41
677000 -- (-2145.865) (-2125.108) (-2174.159) [-2138.533] * (-2171.477) (-2124.646) [-2143.873] (-2299.440) -- 0:15:38
678000 -- (-2206.789) [-2127.948] (-2162.372) (-2143.034) * (-2162.244) (-2136.455) [-2126.035] (-2302.504) -- 0:15:35
679000 -- (-2157.772) [-2119.913] (-2163.442) (-2129.338) * (-2154.930) [-2133.787] (-2138.388) (-2326.630) -- 0:15:32
680000 -- (-2173.217) (-2138.473) (-2160.550) [-2129.306] * (-2147.306) [-2136.520] (-2133.641) (-2329.734) -- 0:15:29
Average standard deviation of split frequencies: 0.036494
681000 -- (-2182.440) (-2146.220) (-2162.558) [-2132.493] * (-2150.425) (-2139.150) [-2139.909] (-2307.847) -- 0:15:26
682000 -- (-2166.737) [-2143.008] (-2187.393) (-2145.371) * [-2132.329] (-2139.998) (-2160.787) (-2309.811) -- 0:15:23
683000 -- (-2158.291) [-2144.976] (-2149.554) (-2155.280) * (-2142.336) [-2140.227] (-2151.096) (-2310.811) -- 0:15:20
684000 -- (-2166.374) (-2148.082) [-2147.397] (-2166.221) * [-2130.217] (-2153.029) (-2144.239) (-2297.826) -- 0:15:17
685000 -- (-2170.088) (-2157.818) (-2164.656) [-2151.505] * [-2121.696] (-2130.946) (-2149.875) (-2314.701) -- 0:15:14
Average standard deviation of split frequencies: 0.036420
686000 -- (-2164.381) (-2140.223) (-2180.628) [-2152.104] * [-2128.089] (-2122.182) (-2173.685) (-2303.333) -- 0:15:11
687000 -- (-2173.971) (-2156.508) (-2181.323) [-2146.617] * [-2140.034] (-2149.999) (-2167.107) (-2317.143) -- 0:15:08
688000 -- (-2197.213) (-2158.576) (-2167.105) [-2140.310] * (-2144.614) [-2137.431] (-2168.923) (-2322.659) -- 0:15:05
689000 -- (-2181.652) (-2157.353) (-2190.452) [-2143.460] * (-2143.532) [-2137.266] (-2181.000) (-2317.326) -- 0:15:01
690000 -- (-2160.314) (-2141.431) (-2197.639) [-2147.297] * (-2151.711) [-2145.530] (-2180.288) (-2309.579) -- 0:14:58
Average standard deviation of split frequencies: 0.035947
691000 -- (-2162.110) (-2153.388) (-2178.553) [-2157.997] * (-2154.095) [-2138.095] (-2198.909) (-2315.569) -- 0:14:55
692000 -- (-2152.166) [-2137.794] (-2169.578) (-2153.501) * (-2148.612) [-2149.078] (-2168.480) (-2306.503) -- 0:14:52
693000 -- (-2137.713) (-2151.107) (-2167.569) [-2147.998] * (-2146.278) [-2137.100] (-2149.835) (-2326.748) -- 0:14:49
694000 -- (-2133.468) (-2158.651) (-2191.571) [-2142.749] * (-2138.172) [-2140.824] (-2167.485) (-2326.764) -- 0:14:46
695000 -- (-2141.930) (-2140.892) (-2185.786) [-2144.093] * [-2139.115] (-2128.749) (-2182.232) (-2334.132) -- 0:14:43
Average standard deviation of split frequencies: 0.035276
696000 -- [-2129.737] (-2142.305) (-2177.194) (-2171.133) * [-2132.815] (-2134.361) (-2178.418) (-2335.384) -- 0:14:40
697000 -- (-2140.813) [-2135.378] (-2206.957) (-2176.068) * (-2170.780) [-2148.993] (-2169.831) (-2324.691) -- 0:14:37
698000 -- [-2121.083] (-2160.670) (-2215.732) (-2177.328) * (-2174.014) [-2146.850] (-2166.218) (-2320.905) -- 0:14:34
699000 -- [-2128.951] (-2144.541) (-2239.559) (-2179.242) * (-2194.890) [-2154.841] (-2175.265) (-2296.923) -- 0:14:31
700000 -- (-2139.351) [-2142.887] (-2189.168) (-2191.896) * (-2170.235) [-2158.620] (-2184.658) (-2305.158) -- 0:14:28
Average standard deviation of split frequencies: 0.034443
701000 -- (-2136.434) [-2139.233] (-2181.504) (-2198.607) * (-2172.752) [-2157.030] (-2170.529) (-2304.632) -- 0:14:25
702000 -- (-2144.006) (-2156.675) [-2170.278] (-2211.727) * (-2171.669) [-2151.884] (-2162.199) (-2300.602) -- 0:14:22
703000 -- [-2135.088] (-2149.203) (-2163.834) (-2201.894) * (-2181.767) [-2152.739] (-2183.357) (-2322.161) -- 0:14:19
704000 -- (-2140.111) [-2143.996] (-2161.641) (-2185.887) * (-2207.308) [-2143.012] (-2148.963) (-2316.855) -- 0:14:16
705000 -- [-2141.584] (-2141.996) (-2173.801) (-2186.431) * (-2180.645) [-2148.316] (-2150.670) (-2328.104) -- 0:14:13
Average standard deviation of split frequencies: 0.034498
706000 -- (-2157.923) [-2147.864] (-2168.211) (-2188.998) * (-2169.965) (-2133.004) [-2148.650] (-2321.216) -- 0:14:09
707000 -- (-2146.968) [-2149.880] (-2159.977) (-2194.307) * (-2176.046) (-2141.077) [-2154.469] (-2325.007) -- 0:14:07
708000 -- [-2137.180] (-2160.220) (-2151.708) (-2172.349) * (-2181.669) [-2135.435] (-2157.078) (-2321.958) -- 0:14:03
709000 -- [-2135.175] (-2151.624) (-2177.878) (-2181.942) * (-2200.414) [-2144.859] (-2177.016) (-2304.498) -- 0:14:00
710000 -- [-2127.987] (-2167.880) (-2160.775) (-2180.325) * (-2170.579) (-2153.367) [-2162.941] (-2302.599) -- 0:13:57
Average standard deviation of split frequencies: 0.035248
711000 -- [-2140.489] (-2171.936) (-2153.426) (-2189.916) * [-2147.400] (-2176.763) (-2157.513) (-2300.738) -- 0:13:54
712000 -- (-2143.997) [-2165.709] (-2147.741) (-2192.158) * [-2144.305] (-2182.039) (-2165.829) (-2309.999) -- 0:13:51
713000 -- [-2151.157] (-2164.068) (-2150.699) (-2210.939) * [-2141.065] (-2164.411) (-2165.391) (-2329.102) -- 0:13:48
714000 -- [-2147.852] (-2185.738) (-2154.548) (-2174.555) * (-2146.330) [-2142.514] (-2165.062) (-2305.987) -- 0:13:45
715000 -- [-2138.467] (-2171.017) (-2162.326) (-2188.382) * (-2149.251) [-2130.984] (-2171.260) (-2308.095) -- 0:13:42
Average standard deviation of split frequencies: 0.036138
716000 -- [-2136.978] (-2175.718) (-2155.643) (-2203.149) * (-2154.839) [-2133.165] (-2168.061) (-2310.424) -- 0:13:39
717000 -- [-2129.520] (-2163.634) (-2156.494) (-2203.653) * [-2146.219] (-2147.139) (-2164.873) (-2299.095) -- 0:13:36
718000 -- [-2134.153] (-2157.512) (-2169.509) (-2213.677) * [-2144.373] (-2158.559) (-2169.447) (-2319.569) -- 0:13:33
719000 -- [-2116.435] (-2172.826) (-2166.073) (-2210.139) * [-2137.714] (-2156.268) (-2166.090) (-2325.148) -- 0:13:30
720000 -- [-2133.320] (-2184.771) (-2162.361) (-2211.876) * [-2149.851] (-2161.251) (-2173.750) (-2294.463) -- 0:13:27
Average standard deviation of split frequencies: 0.036776
721000 -- [-2139.542] (-2164.603) (-2148.628) (-2206.832) * (-2140.055) [-2159.938] (-2170.953) (-2306.304) -- 0:13:24
722000 -- [-2136.962] (-2156.500) (-2163.961) (-2210.889) * (-2147.163) (-2159.839) [-2159.561] (-2298.256) -- 0:13:21
723000 -- (-2133.269) [-2150.295] (-2151.074) (-2200.817) * [-2139.180] (-2149.831) (-2159.463) (-2297.827) -- 0:13:18
724000 -- [-2144.265] (-2155.125) (-2155.119) (-2206.734) * (-2147.844) [-2145.893] (-2164.304) (-2300.747) -- 0:13:15
725000 -- [-2142.584] (-2181.958) (-2137.386) (-2179.381) * (-2139.610) [-2154.747] (-2151.418) (-2301.254) -- 0:13:12
Average standard deviation of split frequencies: 0.036885
726000 -- (-2139.704) (-2177.951) [-2135.024] (-2192.494) * [-2138.198] (-2153.901) (-2148.308) (-2306.097) -- 0:13:09
727000 -- (-2167.040) (-2207.913) [-2128.783] (-2169.914) * (-2136.711) (-2175.868) [-2139.066] (-2291.140) -- 0:13:06
728000 -- (-2161.523) (-2173.873) [-2115.638] (-2167.698) * [-2131.598] (-2167.105) (-2159.131) (-2293.230) -- 0:13:03
729000 -- [-2150.690] (-2158.843) (-2157.181) (-2185.632) * [-2133.838] (-2147.383) (-2157.614) (-2291.377) -- 0:13:00
730000 -- [-2144.093] (-2171.167) (-2135.057) (-2176.973) * [-2138.853] (-2145.746) (-2181.728) (-2285.343) -- 0:12:57
Average standard deviation of split frequencies: 0.036542
731000 -- (-2152.606) (-2162.040) [-2142.318] (-2196.962) * [-2120.927] (-2155.158) (-2188.128) (-2309.466) -- 0:12:54
732000 -- (-2151.738) (-2169.046) [-2138.170] (-2188.788) * [-2123.131] (-2158.290) (-2179.014) (-2320.797) -- 0:12:51
733000 -- (-2146.222) [-2142.733] (-2163.028) (-2191.987) * [-2127.099] (-2157.818) (-2155.763) (-2342.230) -- 0:12:48
734000 -- [-2132.321] (-2165.890) (-2154.320) (-2200.163) * [-2133.257] (-2161.657) (-2176.632) (-2329.108) -- 0:12:45
735000 -- [-2138.827] (-2169.917) (-2164.563) (-2203.404) * [-2139.448] (-2160.465) (-2159.996) (-2317.931) -- 0:12:42
Average standard deviation of split frequencies: 0.036401
736000 -- [-2133.761] (-2166.985) (-2156.837) (-2183.176) * [-2142.869] (-2157.842) (-2152.366) (-2341.671) -- 0:12:39
737000 -- [-2127.635] (-2175.607) (-2139.543) (-2190.424) * [-2144.868] (-2167.816) (-2142.111) (-2334.119) -- 0:12:36
738000 -- [-2133.322] (-2182.370) (-2148.909) (-2184.919) * [-2139.953] (-2156.103) (-2142.736) (-2335.083) -- 0:12:33
739000 -- [-2142.001] (-2193.242) (-2156.779) (-2173.966) * (-2154.578) (-2156.817) [-2141.528] (-2343.638) -- 0:12:30
740000 -- [-2140.599] (-2193.650) (-2163.075) (-2159.315) * (-2156.145) [-2140.204] (-2146.505) (-2330.695) -- 0:12:27
Average standard deviation of split frequencies: 0.036490
741000 -- (-2135.769) (-2178.664) [-2134.476] (-2164.412) * (-2171.885) (-2161.187) [-2150.487] (-2330.637) -- 0:12:24
742000 -- [-2131.045] (-2180.026) (-2143.897) (-2158.073) * (-2169.844) (-2164.724) [-2139.777] (-2320.751) -- 0:12:21
743000 -- (-2155.458) (-2189.860) [-2131.924] (-2162.245) * [-2160.825] (-2172.556) (-2147.014) (-2316.762) -- 0:12:18
744000 -- (-2152.409) (-2204.312) [-2130.144] (-2172.954) * [-2139.184] (-2177.905) (-2143.140) (-2306.801) -- 0:12:15
745000 -- [-2144.700] (-2201.403) (-2136.167) (-2162.441) * [-2127.714] (-2173.872) (-2163.718) (-2322.580) -- 0:12:12
Average standard deviation of split frequencies: 0.036914
746000 -- (-2150.722) (-2168.275) [-2131.189] (-2150.912) * [-2147.196] (-2147.678) (-2167.613) (-2315.978) -- 0:12:09
747000 -- (-2139.518) (-2212.143) [-2143.478] (-2165.727) * [-2132.375] (-2146.946) (-2169.576) (-2328.524) -- 0:12:06
748000 -- (-2126.361) (-2223.640) [-2127.931] (-2149.817) * [-2128.384] (-2156.170) (-2160.230) (-2313.936) -- 0:12:03
749000 -- (-2132.438) (-2202.130) [-2130.494] (-2171.334) * (-2158.943) (-2150.068) [-2149.495] (-2326.669) -- 0:12:00
750000 -- (-2145.174) (-2212.218) [-2133.291] (-2171.854) * (-2147.280) [-2134.224] (-2151.536) (-2305.164) -- 0:11:57
Average standard deviation of split frequencies: 0.036318
751000 -- (-2167.261) (-2192.567) [-2126.689] (-2137.244) * (-2143.085) [-2155.012] (-2166.209) (-2312.160) -- 0:11:54
752000 -- (-2172.665) (-2180.083) [-2126.820] (-2139.855) * [-2130.623] (-2163.844) (-2158.557) (-2305.694) -- 0:11:52
753000 -- (-2155.532) (-2231.063) [-2129.934] (-2143.413) * (-2148.793) [-2147.050] (-2160.204) (-2308.686) -- 0:11:49
754000 -- [-2145.877] (-2219.014) (-2154.324) (-2154.940) * [-2138.545] (-2166.583) (-2146.570) (-2303.761) -- 0:11:47
755000 -- [-2129.425] (-2182.592) (-2161.027) (-2162.654) * (-2137.931) (-2160.460) [-2141.744] (-2299.844) -- 0:11:44
Average standard deviation of split frequencies: 0.036114
756000 -- [-2137.120] (-2211.735) (-2159.431) (-2174.129) * [-2129.125] (-2164.735) (-2140.804) (-2310.319) -- 0:11:41
757000 -- [-2143.261] (-2176.368) (-2169.338) (-2181.802) * [-2129.082] (-2159.306) (-2149.875) (-2327.703) -- 0:11:39
758000 -- [-2130.217] (-2180.323) (-2168.251) (-2164.827) * [-2132.855] (-2171.526) (-2139.896) (-2318.268) -- 0:11:36
759000 -- [-2138.827] (-2183.003) (-2148.312) (-2169.617) * [-2133.070] (-2166.063) (-2151.417) (-2316.104) -- 0:11:33
760000 -- [-2132.395] (-2191.104) (-2145.630) (-2157.725) * [-2124.219] (-2166.596) (-2149.943) (-2331.312) -- 0:11:31
Average standard deviation of split frequencies: 0.036185
761000 -- (-2135.006) (-2171.815) [-2146.190] (-2160.973) * (-2155.444) [-2150.198] (-2156.455) (-2314.233) -- 0:11:28
762000 -- (-2153.038) (-2185.806) [-2133.301] (-2162.523) * (-2154.291) [-2147.904] (-2191.643) (-2327.618) -- 0:11:25
763000 -- (-2149.107) (-2192.118) [-2126.313] (-2176.335) * (-2161.666) [-2138.859] (-2174.982) (-2328.339) -- 0:11:23
764000 -- (-2148.928) (-2197.772) [-2123.407] (-2173.249) * (-2152.237) [-2142.643] (-2175.818) (-2336.957) -- 0:11:20
765000 -- (-2159.173) (-2181.416) [-2130.133] (-2180.031) * (-2149.777) [-2126.385] (-2163.519) (-2335.771) -- 0:11:17
Average standard deviation of split frequencies: 0.035677
766000 -- (-2169.487) (-2197.651) [-2129.196] (-2161.441) * (-2167.919) [-2133.174] (-2160.514) (-2319.832) -- 0:11:15
767000 -- [-2149.931] (-2198.541) (-2141.933) (-2183.852) * (-2167.524) [-2132.894] (-2164.657) (-2322.122) -- 0:11:12
768000 -- [-2134.819] (-2209.125) (-2139.701) (-2149.702) * (-2163.359) [-2128.406] (-2165.451) (-2319.200) -- 0:11:10
769000 -- (-2154.661) (-2215.408) [-2137.568] (-2154.685) * (-2167.929) [-2125.102] (-2165.403) (-2315.404) -- 0:11:07
770000 -- (-2165.968) (-2192.433) [-2122.161] (-2151.612) * (-2168.577) [-2128.871] (-2194.111) (-2308.253) -- 0:11:04
Average standard deviation of split frequencies: 0.035104
771000 -- (-2164.832) (-2225.449) (-2137.039) [-2136.472] * (-2164.928) [-2142.285] (-2175.501) (-2321.748) -- 0:11:01
772000 -- (-2145.639) (-2197.137) [-2128.463] (-2139.581) * (-2169.006) [-2139.747] (-2209.457) (-2326.227) -- 0:10:58
773000 -- (-2169.441) (-2206.195) [-2132.445] (-2137.919) * (-2175.017) [-2145.240] (-2195.788) (-2311.588) -- 0:10:55
774000 -- (-2150.655) (-2212.415) (-2149.610) [-2120.498] * (-2173.709) [-2131.163] (-2181.457) (-2315.793) -- 0:10:52
775000 -- (-2172.565) (-2192.017) [-2133.926] (-2141.139) * (-2188.512) [-2139.202] (-2161.297) (-2324.469) -- 0:10:50
Average standard deviation of split frequencies: 0.034474
776000 -- (-2169.736) (-2193.811) [-2137.063] (-2127.750) * (-2165.863) [-2136.425] (-2173.151) (-2325.320) -- 0:10:47
777000 -- (-2169.540) (-2192.324) [-2131.539] (-2155.362) * (-2148.986) [-2139.880] (-2172.252) (-2322.196) -- 0:10:44
778000 -- (-2177.390) (-2193.422) [-2145.334] (-2144.607) * (-2168.787) (-2140.445) [-2144.388] (-2329.397) -- 0:10:42
779000 -- (-2172.677) (-2189.804) [-2140.934] (-2154.644) * (-2152.358) (-2169.693) [-2142.465] (-2307.734) -- 0:10:39
780000 -- (-2171.029) (-2202.851) [-2147.759] (-2153.635) * (-2139.150) (-2169.920) [-2138.583] (-2311.966) -- 0:10:36
Average standard deviation of split frequencies: 0.034302
781000 -- (-2177.731) (-2189.278) (-2158.873) [-2144.329] * (-2133.627) (-2212.978) [-2135.509] (-2306.518) -- 0:10:34
782000 -- (-2221.064) (-2156.693) (-2156.973) [-2139.844] * (-2140.281) (-2196.221) [-2132.132] (-2308.798) -- 0:10:31
783000 -- (-2206.218) (-2152.256) (-2170.581) [-2128.439] * (-2128.474) (-2184.986) [-2129.617] (-2311.599) -- 0:10:28
784000 -- (-2167.495) (-2202.448) (-2151.138) [-2134.937] * [-2133.139] (-2195.508) (-2151.099) (-2296.445) -- 0:10:25
785000 -- (-2181.548) (-2175.991) [-2141.265] (-2136.367) * [-2133.041] (-2191.159) (-2151.025) (-2297.954) -- 0:10:23
Average standard deviation of split frequencies: 0.033262
786000 -- (-2169.398) (-2186.162) (-2149.330) [-2129.384] * [-2135.863] (-2184.772) (-2158.059) (-2290.573) -- 0:10:20
787000 -- (-2173.796) (-2171.805) (-2165.545) [-2130.961] * [-2127.832] (-2197.710) (-2153.141) (-2298.984) -- 0:10:17
788000 -- (-2183.163) (-2137.832) (-2146.528) [-2122.975] * (-2141.790) (-2187.927) [-2139.607] (-2297.358) -- 0:10:15
789000 -- (-2174.111) (-2150.261) (-2150.862) [-2124.560] * (-2150.279) (-2193.454) [-2143.750] (-2313.082) -- 0:10:12
790000 -- (-2171.672) (-2169.159) (-2142.680) [-2120.751] * [-2156.244] (-2189.794) (-2147.614) (-2308.621) -- 0:10:09
Average standard deviation of split frequencies: 0.033222
791000 -- (-2143.451) (-2170.000) (-2159.848) [-2118.508] * (-2157.055) (-2175.734) [-2134.567] (-2290.869) -- 0:10:06
792000 -- (-2156.277) (-2148.834) (-2169.586) [-2123.580] * (-2155.665) (-2170.615) [-2141.261] (-2304.869) -- 0:10:04
793000 -- (-2161.888) (-2152.189) (-2141.922) [-2138.344] * (-2158.875) [-2141.093] (-2160.757) (-2303.711) -- 0:10:01
794000 -- (-2134.201) (-2163.141) (-2159.624) [-2142.362] * [-2148.572] (-2146.589) (-2160.347) (-2306.284) -- 0:09:58
795000 -- (-2141.171) (-2173.560) (-2159.393) [-2132.458] * (-2156.357) [-2128.650] (-2148.411) (-2324.514) -- 0:09:55
Average standard deviation of split frequencies: 0.032588
796000 -- [-2139.475] (-2156.160) (-2155.287) (-2144.266) * (-2159.175) [-2131.430] (-2152.939) (-2314.196) -- 0:09:52
797000 -- [-2137.802] (-2168.326) (-2138.785) (-2151.327) * (-2136.779) [-2152.156] (-2188.907) (-2329.258) -- 0:09:49
798000 -- (-2134.320) (-2144.755) [-2129.875] (-2164.935) * [-2127.543] (-2155.145) (-2153.285) (-2323.456) -- 0:09:46
799000 -- (-2166.395) (-2174.133) (-2137.071) [-2133.168] * [-2137.708] (-2176.165) (-2154.040) (-2321.246) -- 0:09:43
800000 -- (-2164.280) (-2176.133) [-2134.757] (-2164.782) * [-2129.234] (-2172.162) (-2161.475) (-2320.505) -- 0:09:40
Average standard deviation of split frequencies: 0.032088
801000 -- (-2143.507) (-2159.223) [-2146.438] (-2188.160) * [-2131.856] (-2193.900) (-2166.621) (-2324.759) -- 0:09:37
802000 -- (-2147.912) (-2176.197) [-2139.466] (-2170.400) * [-2126.589] (-2182.860) (-2147.294) (-2338.148) -- 0:09:34
803000 -- (-2147.955) (-2183.293) (-2141.541) [-2152.489] * [-2140.012] (-2170.196) (-2149.677) (-2345.803) -- 0:09:31
804000 -- [-2135.686] (-2198.147) (-2160.682) (-2146.617) * [-2135.207] (-2165.994) (-2136.880) (-2335.263) -- 0:09:28
805000 -- [-2139.144] (-2197.478) (-2159.135) (-2138.053) * [-2123.915] (-2155.884) (-2141.232) (-2346.807) -- 0:09:25
Average standard deviation of split frequencies: 0.030771
806000 -- [-2147.913] (-2179.727) (-2181.566) (-2152.255) * [-2129.942] (-2161.531) (-2142.786) (-2339.161) -- 0:09:22
807000 -- [-2152.189] (-2153.786) (-2180.390) (-2183.873) * [-2133.028] (-2172.951) (-2157.648) (-2326.655) -- 0:09:19
808000 -- (-2179.788) [-2136.374] (-2167.099) (-2139.162) * [-2128.315] (-2160.498) (-2165.764) (-2310.039) -- 0:09:16
809000 -- [-2148.123] (-2138.840) (-2163.553) (-2166.213) * [-2121.812] (-2162.392) (-2178.634) (-2322.418) -- 0:09:13
810000 -- (-2144.215) (-2144.852) (-2158.940) [-2158.354] * [-2113.132] (-2155.109) (-2168.766) (-2330.323) -- 0:09:10
Average standard deviation of split frequencies: 0.029511
811000 -- (-2135.612) (-2128.679) (-2185.848) [-2143.206] * [-2116.704] (-2160.175) (-2154.567) (-2315.711) -- 0:09:07
812000 -- [-2125.191] (-2141.990) (-2175.925) (-2133.358) * [-2128.712] (-2170.014) (-2161.939) (-2313.014) -- 0:09:04
813000 -- (-2137.762) (-2175.781) (-2154.869) [-2139.574] * [-2132.208] (-2149.105) (-2169.695) (-2328.261) -- 0:09:01
814000 -- (-2152.211) (-2168.645) (-2164.126) [-2139.820] * [-2130.180] (-2146.586) (-2185.392) (-2322.894) -- 0:08:58
815000 -- (-2140.471) (-2184.884) (-2177.265) [-2147.179] * [-2133.971] (-2156.518) (-2179.097) (-2327.032) -- 0:08:55
Average standard deviation of split frequencies: 0.027906
816000 -- [-2144.294] (-2190.271) (-2156.852) (-2157.347) * (-2124.580) (-2167.584) [-2151.074] (-2312.815) -- 0:08:52
817000 -- [-2134.219] (-2220.871) (-2177.314) (-2159.095) * [-2131.635] (-2143.451) (-2151.819) (-2328.124) -- 0:08:49
818000 -- (-2137.543) (-2221.788) (-2164.754) [-2148.231] * [-2134.826] (-2151.084) (-2153.008) (-2326.047) -- 0:08:47
819000 -- [-2140.555] (-2232.426) (-2164.143) (-2142.427) * [-2129.816] (-2138.788) (-2185.236) (-2319.301) -- 0:08:44
820000 -- [-2132.576] (-2222.119) (-2169.187) (-2153.289) * (-2135.515) [-2130.177] (-2178.440) (-2303.757) -- 0:08:41
Average standard deviation of split frequencies: 0.026742
821000 -- [-2130.660] (-2206.654) (-2169.114) (-2138.105) * [-2125.571] (-2146.170) (-2169.628) (-2319.521) -- 0:08:38
822000 -- [-2124.749] (-2208.890) (-2182.045) (-2151.896) * [-2132.102] (-2143.530) (-2163.793) (-2319.304) -- 0:08:36
823000 -- [-2129.515] (-2211.353) (-2177.151) (-2145.766) * [-2135.289] (-2143.076) (-2191.022) (-2309.109) -- 0:08:32
824000 -- [-2118.424] (-2181.541) (-2164.507) (-2145.487) * [-2133.834] (-2147.982) (-2202.520) (-2310.565) -- 0:08:30
825000 -- (-2119.387) (-2199.674) (-2161.918) [-2139.422] * [-2129.067] (-2151.295) (-2199.546) (-2324.804) -- 0:08:26
Average standard deviation of split frequencies: 0.026126
826000 -- [-2126.427] (-2196.039) (-2167.092) (-2141.820) * [-2121.341] (-2151.630) (-2196.079) (-2332.469) -- 0:08:24
827000 -- [-2130.824] (-2191.229) (-2159.260) (-2135.453) * [-2122.681] (-2161.832) (-2202.906) (-2352.523) -- 0:08:21
828000 -- (-2136.722) (-2202.276) (-2153.487) [-2120.436] * (-2132.601) [-2140.962] (-2161.438) (-2333.993) -- 0:08:18
829000 -- (-2142.228) (-2192.123) (-2150.101) [-2140.337] * [-2134.576] (-2139.590) (-2159.583) (-2323.755) -- 0:08:16
830000 -- (-2143.755) (-2202.637) [-2140.657] (-2166.353) * [-2120.562] (-2135.677) (-2163.802) (-2322.619) -- 0:08:13
Average standard deviation of split frequencies: 0.024970
831000 -- (-2135.194) (-2210.453) [-2125.318] (-2165.482) * [-2129.975] (-2156.111) (-2145.141) (-2307.248) -- 0:08:10
832000 -- [-2126.717] (-2211.783) (-2133.567) (-2164.848) * [-2133.297] (-2140.887) (-2173.912) (-2307.306) -- 0:08:07
833000 -- (-2123.699) (-2197.662) [-2132.602] (-2148.799) * [-2125.760] (-2145.525) (-2150.644) (-2325.805) -- 0:08:05
834000 -- [-2131.155] (-2214.582) (-2156.063) (-2161.980) * [-2123.713] (-2139.004) (-2148.003) (-2295.625) -- 0:08:02
835000 -- [-2121.532] (-2209.878) (-2165.723) (-2155.659) * (-2118.633) [-2137.122] (-2163.378) (-2318.216) -- 0:07:59
Average standard deviation of split frequencies: 0.023652
836000 -- [-2136.237] (-2197.663) (-2137.639) (-2154.881) * [-2135.312] (-2145.884) (-2160.113) (-2307.482) -- 0:07:56
837000 -- [-2139.470] (-2206.466) (-2139.531) (-2164.143) * (-2141.030) [-2146.412] (-2171.411) (-2315.413) -- 0:07:53
838000 -- (-2139.857) (-2192.232) [-2137.561] (-2165.732) * [-2134.502] (-2134.887) (-2169.731) (-2298.345) -- 0:07:50
839000 -- (-2137.752) (-2178.419) [-2135.249] (-2179.885) * (-2136.673) [-2133.394] (-2159.651) (-2320.680) -- 0:07:47
840000 -- [-2136.439] (-2152.982) (-2144.343) (-2173.733) * (-2135.992) [-2125.508] (-2163.022) (-2312.819) -- 0:07:44
Average standard deviation of split frequencies: 0.022866
841000 -- [-2136.694] (-2156.400) (-2143.081) (-2179.625) * (-2137.227) [-2139.902] (-2142.240) (-2320.706) -- 0:07:41
842000 -- (-2161.974) (-2181.876) [-2133.590] (-2166.102) * [-2143.037] (-2143.746) (-2137.258) (-2311.738) -- 0:07:38
843000 -- (-2152.647) (-2155.194) [-2139.661] (-2160.409) * [-2137.420] (-2147.612) (-2131.933) (-2319.662) -- 0:07:36
844000 -- (-2148.835) [-2131.897] (-2152.315) (-2145.907) * [-2132.468] (-2155.788) (-2139.370) (-2303.340) -- 0:07:33
845000 -- (-2169.076) [-2131.043] (-2173.322) (-2149.102) * [-2132.840] (-2147.833) (-2147.290) (-2298.980) -- 0:07:30
Average standard deviation of split frequencies: 0.022304
846000 -- (-2157.331) [-2115.248] (-2187.321) (-2166.410) * [-2123.811] (-2157.423) (-2148.978) (-2317.514) -- 0:07:27
847000 -- (-2148.034) [-2122.414] (-2175.291) (-2149.533) * [-2125.214] (-2146.321) (-2151.377) (-2324.106) -- 0:07:24
848000 -- [-2134.361] (-2141.079) (-2165.017) (-2173.842) * [-2137.591] (-2137.225) (-2158.008) (-2318.580) -- 0:07:21
849000 -- [-2126.986] (-2128.514) (-2176.381) (-2173.972) * [-2133.561] (-2145.389) (-2164.185) (-2329.830) -- 0:07:18
850000 -- (-2143.020) [-2130.622] (-2185.970) (-2148.543) * (-2142.161) [-2122.867] (-2138.871) (-2323.867) -- 0:07:15
Average standard deviation of split frequencies: 0.021997
851000 -- [-2137.674] (-2142.655) (-2178.827) (-2127.996) * (-2165.616) [-2122.790] (-2138.459) (-2316.842) -- 0:07:12
852000 -- (-2150.817) [-2140.635] (-2210.550) (-2139.144) * (-2172.192) [-2129.065] (-2140.974) (-2310.626) -- 0:07:09
853000 -- (-2142.246) [-2130.190] (-2216.785) (-2153.356) * (-2167.472) (-2145.871) [-2142.215] (-2302.971) -- 0:07:06
854000 -- [-2145.984] (-2142.124) (-2199.613) (-2149.067) * (-2169.367) [-2146.870] (-2142.884) (-2314.174) -- 0:07:03
855000 -- [-2131.834] (-2125.723) (-2198.665) (-2154.837) * [-2137.436] (-2142.626) (-2179.154) (-2319.494) -- 0:07:00
Average standard deviation of split frequencies: 0.021814
856000 -- (-2150.203) [-2122.247] (-2189.421) (-2156.669) * (-2152.225) [-2118.706] (-2175.262) (-2307.968) -- 0:06:57
857000 -- (-2148.431) (-2132.928) (-2171.477) [-2152.679] * (-2163.966) [-2125.966] (-2153.642) (-2318.345) -- 0:06:54
858000 -- [-2128.182] (-2140.573) (-2171.990) (-2160.939) * (-2158.802) [-2131.464] (-2170.810) (-2301.065) -- 0:06:51
859000 -- [-2131.592] (-2145.424) (-2162.566) (-2198.501) * [-2149.326] (-2125.416) (-2171.672) (-2303.426) -- 0:06:48
860000 -- [-2131.240] (-2133.923) (-2192.121) (-2176.158) * (-2151.205) [-2131.545] (-2167.217) (-2308.819) -- 0:06:45
Average standard deviation of split frequencies: 0.021658
861000 -- (-2155.690) [-2133.688] (-2163.305) (-2186.209) * (-2173.127) [-2127.413] (-2150.383) (-2325.565) -- 0:06:42
862000 -- (-2140.415) [-2131.904] (-2167.168) (-2168.103) * (-2188.582) [-2120.487] (-2146.349) (-2317.108) -- 0:06:39
863000 -- (-2133.435) [-2117.179] (-2171.634) (-2155.334) * (-2189.585) [-2129.304] (-2161.442) (-2303.071) -- 0:06:36
864000 -- [-2142.671] (-2123.601) (-2173.913) (-2158.243) * (-2167.560) [-2134.285] (-2152.138) (-2298.161) -- 0:06:33
865000 -- (-2158.520) [-2128.332] (-2144.273) (-2146.048) * (-2168.200) [-2130.419] (-2157.982) (-2302.597) -- 0:06:30
Average standard deviation of split frequencies: 0.021618
866000 -- (-2180.259) [-2130.433] (-2156.514) (-2147.301) * (-2138.940) [-2136.572] (-2160.048) (-2307.731) -- 0:06:27
867000 -- (-2179.342) [-2141.867] (-2167.356) (-2134.166) * (-2139.074) [-2131.537] (-2178.432) (-2301.341) -- 0:06:24
868000 -- (-2187.558) [-2153.433] (-2176.445) (-2146.450) * (-2161.035) [-2135.867] (-2154.463) (-2303.019) -- 0:06:21
869000 -- (-2175.248) [-2156.330] (-2188.813) (-2153.895) * (-2155.494) [-2145.444] (-2154.526) (-2310.782) -- 0:06:18
870000 -- (-2159.181) [-2143.576] (-2192.024) (-2185.216) * [-2129.064] (-2151.271) (-2151.487) (-2318.213) -- 0:06:15
Average standard deviation of split frequencies: 0.021657
871000 -- [-2142.599] (-2149.000) (-2156.915) (-2213.649) * [-2128.848] (-2142.121) (-2154.196) (-2323.423) -- 0:06:12
872000 -- [-2147.127] (-2146.676) (-2161.668) (-2192.100) * [-2131.590] (-2152.382) (-2152.122) (-2334.779) -- 0:06:10
873000 -- [-2148.430] (-2150.475) (-2162.180) (-2191.894) * (-2153.510) [-2158.211] (-2170.229) (-2339.091) -- 0:06:07
874000 -- [-2170.549] (-2164.936) (-2156.929) (-2162.619) * [-2134.578] (-2146.261) (-2175.970) (-2335.058) -- 0:06:04
875000 -- (-2179.741) (-2187.324) [-2141.273] (-2156.229) * (-2155.367) [-2129.196] (-2188.901) (-2347.952) -- 0:06:01
Average standard deviation of split frequencies: 0.021156
876000 -- (-2160.334) (-2180.231) [-2142.721] (-2161.602) * (-2149.851) [-2128.359] (-2191.750) (-2342.397) -- 0:05:58
877000 -- (-2172.064) (-2174.595) [-2131.062] (-2170.437) * (-2154.083) [-2137.566] (-2173.400) (-2355.716) -- 0:05:55
878000 -- (-2175.978) (-2189.246) [-2131.510] (-2167.788) * (-2144.109) [-2135.545] (-2182.046) (-2352.441) -- 0:05:52
879000 -- [-2162.694] (-2165.411) (-2140.575) (-2175.889) * (-2157.267) [-2141.073] (-2149.691) (-2338.830) -- 0:05:49
880000 -- (-2163.442) (-2156.700) [-2147.771] (-2188.331) * (-2164.222) (-2149.949) [-2146.188] (-2337.567) -- 0:05:46
Average standard deviation of split frequencies: 0.021167
881000 -- (-2161.532) [-2142.261] (-2148.281) (-2185.439) * [-2148.324] (-2170.394) (-2142.035) (-2362.992) -- 0:05:43
882000 -- (-2157.792) [-2143.772] (-2169.320) (-2183.864) * (-2146.410) (-2161.862) [-2137.460] (-2351.819) -- 0:05:40
883000 -- (-2155.690) [-2130.536] (-2169.042) (-2191.203) * (-2168.349) (-2149.355) [-2149.000] (-2362.322) -- 0:05:37
884000 -- (-2154.223) [-2147.245] (-2170.750) (-2192.053) * (-2172.753) (-2158.992) [-2126.644] (-2346.502) -- 0:05:34
885000 -- (-2177.254) (-2149.172) [-2156.190] (-2181.660) * (-2175.396) [-2152.676] (-2137.583) (-2346.933) -- 0:05:31
Average standard deviation of split frequencies: 0.021526
886000 -- (-2158.099) (-2161.206) [-2143.126] (-2171.110) * [-2136.886] (-2156.408) (-2141.921) (-2341.778) -- 0:05:29
887000 -- (-2155.023) (-2166.270) [-2138.532] (-2175.936) * [-2143.522] (-2164.902) (-2144.933) (-2346.280) -- 0:05:26
888000 -- (-2160.876) (-2148.036) [-2134.958] (-2173.648) * (-2132.621) [-2152.486] (-2153.598) (-2329.290) -- 0:05:23
889000 -- (-2146.934) (-2152.839) [-2132.480] (-2178.284) * [-2133.787] (-2157.946) (-2187.306) (-2338.563) -- 0:05:20
890000 -- (-2135.244) (-2166.434) [-2137.281] (-2165.371) * [-2133.699] (-2151.475) (-2166.633) (-2339.153) -- 0:05:17
Average standard deviation of split frequencies: 0.020899
891000 -- (-2137.655) (-2157.290) [-2136.043] (-2166.804) * (-2156.274) [-2142.685] (-2148.675) (-2340.763) -- 0:05:14
892000 -- (-2141.548) (-2177.676) [-2137.820] (-2172.359) * (-2152.934) [-2139.034] (-2174.856) (-2323.537) -- 0:05:11
893000 -- [-2137.729] (-2181.932) (-2158.063) (-2187.507) * (-2167.504) [-2135.561] (-2157.126) (-2319.929) -- 0:05:08
894000 -- [-2134.720] (-2147.750) (-2169.008) (-2188.195) * (-2174.487) [-2131.261] (-2170.015) (-2306.627) -- 0:05:05
895000 -- [-2142.126] (-2150.837) (-2177.194) (-2187.723) * (-2158.203) [-2138.069] (-2185.219) (-2318.989) -- 0:05:02
Average standard deviation of split frequencies: 0.021015
896000 -- [-2137.526] (-2163.045) (-2193.946) (-2178.855) * (-2146.280) [-2141.147] (-2158.604) (-2324.909) -- 0:04:59
897000 -- (-2146.981) (-2171.660) [-2151.396] (-2167.166) * (-2152.255) [-2142.289] (-2153.047) (-2341.051) -- 0:04:56
898000 -- (-2163.846) (-2184.352) [-2143.257] (-2164.898) * (-2144.409) [-2127.447] (-2154.614) (-2344.178) -- 0:04:53
899000 -- (-2184.399) (-2158.101) [-2125.326] (-2163.435) * [-2139.876] (-2131.865) (-2162.986) (-2333.440) -- 0:04:50
900000 -- (-2196.859) (-2152.859) [-2118.700] (-2166.679) * (-2140.225) [-2135.628] (-2149.787) (-2326.083) -- 0:04:48
Average standard deviation of split frequencies: 0.021399
901000 -- (-2182.362) (-2166.977) [-2125.758] (-2155.343) * (-2142.284) [-2129.719] (-2138.561) (-2324.848) -- 0:04:45
902000 -- (-2222.147) (-2163.449) [-2111.776] (-2172.873) * (-2136.854) [-2134.482] (-2162.626) (-2307.707) -- 0:04:42
903000 -- (-2185.106) (-2166.894) [-2118.840] (-2157.266) * (-2132.574) [-2132.163] (-2156.103) (-2301.889) -- 0:04:39
904000 -- (-2198.333) (-2154.114) [-2127.092] (-2167.644) * [-2137.228] (-2146.258) (-2157.468) (-2302.919) -- 0:04:36
905000 -- (-2217.032) [-2139.799] (-2129.048) (-2169.686) * (-2154.691) (-2157.174) [-2141.718] (-2288.419) -- 0:04:33
Average standard deviation of split frequencies: 0.021600
906000 -- (-2209.693) (-2145.543) [-2138.769] (-2172.842) * (-2157.064) (-2148.727) [-2132.045] (-2299.982) -- 0:04:30
907000 -- (-2204.717) (-2152.060) [-2143.293] (-2179.564) * (-2154.900) [-2141.703] (-2129.298) (-2302.464) -- 0:04:27
908000 -- (-2200.296) [-2143.668] (-2139.880) (-2180.326) * (-2154.672) (-2150.402) [-2122.025] (-2309.586) -- 0:04:24
909000 -- (-2193.641) (-2158.131) [-2121.285] (-2158.611) * [-2142.686] (-2152.025) (-2129.687) (-2313.833) -- 0:04:21
910000 -- (-2177.611) (-2180.421) [-2113.102] (-2157.088) * (-2157.702) (-2158.159) [-2136.893] (-2330.718) -- 0:04:18
Average standard deviation of split frequencies: 0.022170
911000 -- (-2161.417) (-2167.992) [-2133.337] (-2158.039) * [-2147.420] (-2146.273) (-2141.932) (-2306.915) -- 0:04:15
912000 -- (-2166.751) (-2193.566) [-2132.986] (-2149.282) * (-2142.952) (-2155.403) [-2130.960] (-2304.027) -- 0:04:13
913000 -- (-2146.266) (-2197.017) [-2125.871] (-2159.202) * (-2147.226) (-2161.547) [-2143.626] (-2306.081) -- 0:04:10
914000 -- (-2172.404) (-2205.051) [-2135.670] (-2171.414) * (-2139.918) (-2151.026) [-2139.238] (-2311.861) -- 0:04:07
915000 -- (-2159.273) (-2183.662) [-2129.942] (-2178.683) * (-2132.061) (-2151.940) [-2129.276] (-2323.443) -- 0:04:04
Average standard deviation of split frequencies: 0.023544
916000 -- (-2155.373) (-2191.095) [-2121.479] (-2174.501) * (-2146.553) [-2143.378] (-2143.830) (-2321.442) -- 0:04:01
917000 -- (-2158.132) (-2196.200) [-2132.073] (-2196.135) * (-2158.632) [-2133.240] (-2144.956) (-2320.340) -- 0:03:58
918000 -- (-2156.635) (-2180.371) [-2134.352] (-2187.220) * (-2171.801) [-2124.424] (-2151.217) (-2316.454) -- 0:03:55
919000 -- (-2142.498) (-2207.815) [-2135.093] (-2184.504) * (-2165.399) [-2121.672] (-2152.735) (-2328.836) -- 0:03:52
920000 -- (-2149.186) (-2200.730) [-2129.232] (-2186.023) * (-2165.679) (-2134.653) [-2143.874] (-2323.698) -- 0:03:49
Average standard deviation of split frequencies: 0.024762
921000 -- [-2135.130] (-2217.894) (-2132.045) (-2186.634) * (-2178.181) [-2130.894] (-2130.215) (-2327.263) -- 0:03:46
922000 -- [-2121.581] (-2220.288) (-2137.930) (-2180.116) * (-2169.494) [-2121.185] (-2132.868) (-2320.281) -- 0:03:44
923000 -- [-2129.254] (-2203.125) (-2134.963) (-2195.446) * (-2155.126) [-2133.936] (-2144.708) (-2322.718) -- 0:03:41
924000 -- [-2131.774] (-2201.558) (-2134.718) (-2178.857) * (-2156.534) (-2135.480) [-2146.986] (-2324.900) -- 0:03:38
925000 -- (-2118.017) (-2199.861) [-2127.878] (-2159.666) * (-2174.459) [-2124.760] (-2145.203) (-2346.010) -- 0:03:35
Average standard deviation of split frequencies: 0.024436
926000 -- (-2134.861) (-2176.198) [-2115.280] (-2162.189) * (-2177.206) [-2130.946] (-2139.868) (-2347.720) -- 0:03:32
927000 -- (-2135.707) (-2188.244) [-2127.262] (-2153.223) * (-2181.651) [-2139.543] (-2142.527) (-2339.876) -- 0:03:29
928000 -- (-2131.315) (-2165.669) [-2123.462] (-2164.320) * (-2179.318) (-2142.917) [-2132.360] (-2324.315) -- 0:03:27
929000 -- [-2134.196] (-2174.683) (-2141.104) (-2171.473) * (-2185.230) (-2159.248) [-2155.051] (-2332.635) -- 0:03:24
930000 -- (-2150.639) (-2185.298) [-2135.825] (-2168.808) * (-2180.765) (-2142.302) [-2150.091] (-2327.424) -- 0:03:21
Average standard deviation of split frequencies: 0.025256
931000 -- [-2137.297] (-2166.297) (-2151.382) (-2186.942) * (-2169.728) [-2143.306] (-2148.381) (-2331.079) -- 0:03:18
932000 -- (-2143.719) (-2180.122) [-2139.058] (-2184.312) * (-2186.851) [-2149.465] (-2155.784) (-2322.133) -- 0:03:15
933000 -- (-2145.766) (-2196.333) [-2134.160] (-2169.675) * (-2180.485) [-2141.130] (-2155.081) (-2334.005) -- 0:03:12
934000 -- (-2177.307) (-2222.770) [-2115.548] (-2160.611) * (-2175.512) [-2135.811] (-2152.093) (-2355.456) -- 0:03:09
935000 -- (-2179.931) (-2199.047) [-2116.680] (-2168.003) * (-2181.260) [-2150.537] (-2143.189) (-2323.922) -- 0:03:06
Average standard deviation of split frequencies: 0.025617
936000 -- (-2181.254) (-2189.596) [-2123.896] (-2154.449) * (-2174.230) [-2125.168] (-2138.346) (-2296.633) -- 0:03:03
937000 -- (-2182.041) (-2191.487) (-2144.464) [-2155.408] * (-2178.236) [-2122.930] (-2144.068) (-2302.729) -- 0:03:00
938000 -- (-2167.914) (-2184.901) [-2140.804] (-2149.948) * (-2184.603) [-2122.015] (-2138.096) (-2317.505) -- 0:02:58
939000 -- (-2171.756) (-2168.545) (-2142.485) [-2134.146] * (-2187.121) (-2130.943) [-2135.112] (-2320.115) -- 0:02:55
940000 -- (-2168.136) (-2177.560) (-2158.797) [-2138.100] * (-2172.417) [-2137.102] (-2147.929) (-2322.524) -- 0:02:52
Average standard deviation of split frequencies: 0.025802
941000 -- (-2144.295) (-2198.366) (-2156.363) [-2131.955] * (-2170.782) [-2127.769] (-2150.928) (-2304.085) -- 0:02:49
942000 -- (-2162.003) (-2189.128) (-2146.077) [-2127.996] * (-2177.928) [-2141.179] (-2148.866) (-2315.237) -- 0:02:46
943000 -- (-2150.102) (-2177.690) (-2135.402) [-2124.273] * (-2179.258) (-2158.008) [-2146.591] (-2320.579) -- 0:02:43
944000 -- (-2153.761) (-2159.870) [-2143.772] (-2140.906) * (-2171.201) [-2157.294] (-2155.736) (-2332.927) -- 0:02:40
945000 -- (-2160.962) (-2181.122) (-2159.900) [-2129.115] * (-2171.493) (-2164.344) [-2145.188] (-2331.377) -- 0:02:37
Average standard deviation of split frequencies: 0.025320
946000 -- (-2152.615) (-2183.156) (-2139.383) [-2129.083] * (-2157.229) (-2168.559) [-2135.437] (-2307.589) -- 0:02:34
947000 -- (-2147.627) (-2173.393) (-2158.373) [-2128.168] * (-2195.704) [-2151.015] (-2130.427) (-2321.280) -- 0:02:32
948000 -- (-2137.663) (-2183.772) (-2181.859) [-2135.465] * (-2178.751) (-2168.293) [-2136.453] (-2319.436) -- 0:02:29
949000 -- (-2138.133) (-2189.696) (-2175.119) [-2138.697] * (-2180.093) (-2159.886) [-2117.489] (-2314.868) -- 0:02:26
950000 -- (-2131.601) (-2179.829) (-2175.507) [-2134.557] * (-2188.797) (-2171.897) [-2114.861] (-2312.639) -- 0:02:23
Average standard deviation of split frequencies: 0.025110
951000 -- (-2166.977) (-2178.346) (-2161.108) [-2133.244] * (-2202.853) (-2140.946) [-2123.191] (-2321.836) -- 0:02:20
952000 -- (-2156.037) (-2192.015) [-2154.803] (-2135.237) * (-2186.905) (-2150.615) [-2118.477] (-2337.269) -- 0:02:17
953000 -- (-2163.692) (-2154.054) (-2165.695) [-2136.810] * (-2175.062) (-2163.409) [-2119.237] (-2321.607) -- 0:02:14
954000 -- (-2137.382) (-2174.620) (-2186.811) [-2145.226] * (-2158.159) (-2154.766) [-2124.384] (-2326.353) -- 0:02:11
955000 -- [-2130.648] (-2168.997) (-2169.038) (-2133.515) * (-2165.221) (-2146.578) [-2123.852] (-2333.080) -- 0:02:08
Average standard deviation of split frequencies: 0.024545
956000 -- (-2124.286) [-2133.128] (-2179.391) (-2130.274) * (-2164.658) (-2145.514) [-2136.892] (-2301.188) -- 0:02:06
957000 -- (-2149.984) (-2154.009) (-2173.458) [-2123.901] * (-2144.253) [-2138.605] (-2134.951) (-2305.787) -- 0:02:03
958000 -- (-2145.397) (-2162.826) (-2180.069) [-2133.711] * (-2177.714) [-2132.731] (-2130.839) (-2297.641) -- 0:02:00
959000 -- (-2158.257) (-2160.937) (-2207.927) [-2143.958] * (-2169.928) (-2144.439) [-2140.862] (-2307.206) -- 0:01:57
960000 -- (-2158.823) (-2164.351) (-2193.840) [-2135.254] * (-2160.061) [-2137.269] (-2162.302) (-2327.474) -- 0:01:54
Average standard deviation of split frequencies: 0.023922
961000 -- (-2143.069) (-2157.944) (-2171.341) [-2135.820] * (-2145.136) [-2127.957] (-2170.830) (-2318.827) -- 0:01:51
962000 -- (-2153.343) (-2145.898) (-2188.799) [-2140.265] * (-2150.231) [-2130.226] (-2170.678) (-2315.348) -- 0:01:48
963000 -- (-2172.134) [-2150.293] (-2180.672) (-2131.340) * (-2137.850) [-2134.277] (-2158.305) (-2320.407) -- 0:01:45
964000 -- (-2167.584) [-2141.564] (-2212.596) (-2135.567) * (-2130.256) [-2127.144] (-2170.444) (-2313.820) -- 0:01:43
965000 -- (-2164.052) [-2145.000] (-2192.018) (-2141.922) * (-2143.664) [-2133.444] (-2182.286) (-2300.835) -- 0:01:40
Average standard deviation of split frequencies: 0.024074
966000 -- (-2164.770) (-2144.592) (-2168.981) [-2141.101] * [-2131.434] (-2137.388) (-2151.307) (-2289.367) -- 0:01:37
967000 -- (-2180.813) [-2141.973] (-2179.699) (-2163.210) * (-2152.715) [-2144.247] (-2153.465) (-2294.454) -- 0:01:34
968000 -- (-2156.836) [-2134.616] (-2214.348) (-2165.239) * (-2143.436) [-2142.432] (-2154.790) (-2307.161) -- 0:01:31
969000 -- (-2172.458) [-2132.587] (-2206.894) (-2167.202) * (-2171.731) [-2133.117] (-2157.056) (-2316.717) -- 0:01:28
970000 -- (-2152.720) [-2129.224] (-2210.278) (-2157.655) * (-2159.200) (-2127.944) [-2154.217] (-2315.614) -- 0:01:25
Average standard deviation of split frequencies: 0.024417
971000 -- (-2142.874) [-2130.143] (-2185.545) (-2155.699) * (-2172.566) [-2138.945] (-2152.131) (-2309.246) -- 0:01:22
972000 -- (-2151.893) (-2142.732) (-2214.401) [-2145.101] * (-2156.878) [-2155.692] (-2153.348) (-2327.534) -- 0:01:20
973000 -- [-2136.173] (-2155.567) (-2218.133) (-2149.054) * (-2177.048) [-2136.783] (-2141.920) (-2308.746) -- 0:01:17
974000 -- [-2132.350] (-2168.904) (-2193.882) (-2159.432) * (-2192.911) [-2127.866] (-2157.241) (-2298.366) -- 0:01:14
975000 -- [-2139.559] (-2160.326) (-2183.072) (-2142.809) * (-2191.010) [-2126.197] (-2163.338) (-2305.535) -- 0:01:11
Average standard deviation of split frequencies: 0.024150
976000 -- [-2138.288] (-2156.151) (-2199.800) (-2144.524) * (-2171.751) [-2124.756] (-2164.350) (-2299.921) -- 0:01:08
977000 -- (-2138.586) [-2148.221] (-2185.765) (-2134.307) * (-2166.819) [-2124.278] (-2156.843) (-2292.040) -- 0:01:05
978000 -- (-2129.629) (-2141.926) (-2183.921) [-2145.934] * (-2158.637) (-2131.929) [-2143.050] (-2304.967) -- 0:01:02
979000 -- (-2141.394) (-2138.255) (-2157.846) [-2137.652] * (-2173.605) [-2145.850] (-2156.286) (-2296.551) -- 0:00:59
980000 -- (-2166.790) (-2134.114) (-2151.738) [-2135.568] * (-2184.142) [-2128.188] (-2162.802) (-2321.827) -- 0:00:57
Average standard deviation of split frequencies: 0.023835
981000 -- (-2140.480) (-2178.282) [-2142.893] (-2134.848) * (-2169.823) [-2124.911] (-2157.899) (-2290.522) -- 0:00:54
982000 -- (-2156.870) (-2147.003) (-2129.996) [-2133.758] * (-2213.652) [-2119.116] (-2149.458) (-2306.629) -- 0:00:51
983000 -- (-2166.937) (-2137.216) [-2140.172] (-2143.397) * (-2190.256) [-2137.985] (-2148.262) (-2304.662) -- 0:00:48
984000 -- (-2205.575) [-2139.978] (-2133.428) (-2164.695) * (-2186.961) [-2137.461] (-2159.815) (-2319.593) -- 0:00:45
985000 -- (-2216.998) (-2136.657) [-2144.477] (-2135.962) * (-2184.362) [-2137.261] (-2170.985) (-2324.567) -- 0:00:42
Average standard deviation of split frequencies: 0.024184
986000 -- (-2210.259) [-2134.942] (-2163.305) (-2141.117) * (-2190.337) [-2134.350] (-2147.424) (-2321.797) -- 0:00:39
987000 -- (-2202.614) (-2143.499) (-2149.719) [-2134.053] * (-2176.450) [-2140.057] (-2133.378) (-2306.978) -- 0:00:37
988000 -- (-2187.563) (-2147.821) (-2164.134) [-2125.398] * (-2174.630) (-2133.342) [-2148.181] (-2308.798) -- 0:00:34
989000 -- (-2187.264) (-2144.527) (-2158.875) [-2130.710] * (-2194.429) (-2152.724) [-2136.506] (-2324.501) -- 0:00:31
990000 -- (-2180.188) (-2145.513) (-2179.031) [-2127.412] * (-2187.691) (-2132.102) [-2140.527] (-2321.203) -- 0:00:28
Average standard deviation of split frequencies: 0.023924
991000 -- (-2183.694) [-2141.347] (-2154.682) (-2133.677) * (-2177.151) [-2125.499] (-2130.753) (-2305.041) -- 0:00:25
992000 -- (-2160.563) (-2151.143) (-2158.202) [-2130.170] * (-2179.178) [-2133.851] (-2142.144) (-2303.932) -- 0:00:22
993000 -- (-2142.807) (-2167.024) (-2170.794) [-2130.231] * (-2165.813) [-2129.861] (-2138.031) (-2314.399) -- 0:00:19
994000 -- (-2149.107) (-2177.754) (-2186.105) [-2139.208] * (-2152.546) [-2119.355] (-2146.284) (-2300.028) -- 0:00:17
995000 -- (-2146.211) (-2188.760) (-2180.174) [-2139.749] * [-2149.281] (-2135.377) (-2176.640) (-2307.596) -- 0:00:14
Average standard deviation of split frequencies: 0.023915
996000 -- (-2158.737) (-2191.449) (-2156.152) [-2133.570] * (-2162.772) [-2136.560] (-2161.650) (-2325.311) -- 0:00:11
997000 -- (-2163.258) (-2192.233) (-2150.375) [-2136.238] * (-2160.518) [-2151.005] (-2144.966) (-2333.694) -- 0:00:08
998000 -- (-2178.817) (-2205.228) [-2137.487] (-2141.485) * (-2162.381) [-2130.669] (-2138.600) (-2320.370) -- 0:00:05
999000 -- (-2186.536) (-2176.393) (-2146.237) [-2144.214] * (-2157.683) (-2139.705) [-2125.927] (-2321.186) -- 0:00:02
1000000 -- (-2208.822) (-2165.444) (-2153.050) [-2138.938] * (-2181.296) (-2151.034) [-2128.486] (-2315.699) -- 0:00:00
Average standard deviation of split frequencies: 0.023620
Analysis completed in 47 mins 29 seconds
Analysis used 2846.09 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -2103.78
Likelihood of best state for "cold" chain of run 2 was -2107.84
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
50.3 % ( 46 %) Dirichlet(Revmat{all})
65.6 % ( 47 %) Slider(Revmat{all})
26.3 % ( 37 %) Dirichlet(Pi{all})
28.0 % ( 33 %) Slider(Pi{all})
60.5 % ( 20 %) Multiplier(Alpha{1,2})
59.6 % ( 28 %) Multiplier(Alpha{3})
75.3 % ( 45 %) Slider(Pinvar{all})
73.1 % ( 75 %) ExtSPR(Tau{all},V{all})
72.1 % ( 82 %) ExtTBR(Tau{all},V{all})
80.5 % ( 86 %) NNI(Tau{all},V{all})
44.3 % ( 57 %) ParsSPR(Tau{all},V{all})
27.6 % ( 24 %) Multiplier(V{all})
80.0 % ( 77 %) Nodeslider(V{all})
25.6 % ( 21 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
50.1 % ( 43 %) Dirichlet(Revmat{all})
66.0 % ( 59 %) Slider(Revmat{all})
26.2 % ( 28 %) Dirichlet(Pi{all})
28.0 % ( 26 %) Slider(Pi{all})
61.3 % ( 34 %) Multiplier(Alpha{1,2})
59.2 % ( 34 %) Multiplier(Alpha{3})
74.8 % ( 54 %) Slider(Pinvar{all})
73.3 % ( 80 %) ExtSPR(Tau{all},V{all})
72.4 % ( 80 %) ExtTBR(Tau{all},V{all})
80.6 % ( 86 %) NNI(Tau{all},V{all})
44.6 % ( 42 %) ParsSPR(Tau{all},V{all})
27.5 % ( 22 %) Multiplier(V{all})
79.8 % ( 77 %) Nodeslider(V{all})
25.6 % ( 20 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.13 0.00 0.00
2 | 166445 0.15 0.00
3 | 166354 166692 0.13
4 | 166223 166999 167287
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.13 0.00 0.00
2 | 166543 0.14 0.00
3 | 166766 166601 0.00
4 | 166463 166490 167137
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -2123.98
| 1 |
| 1 1 |
| 11 2 |
| 1 2 2 * 11 2 |
| 1 1 * 1 1 |
| *2 2 22 1 2 1 2 * 2 2 1 22|
| 1 2 1 1 1 2 11 1 2 1 * 2 |
|1 2 1 2 2 1* 2 2 211 * 122 1 212 |
|22 212 2 2 12 2 2 1 21 2 111|
| 22 1 1 1 2 2 2 |
| 2 2 1 1 2 11 2 1 1 |
| 2 1 1 2 |
| 1 12 1 |
| 2 |
| 1 2 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -2147.91
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2116.67 -2163.95
2 -2118.90 -2174.03
--------------------------------------
TOTAL -2117.26 -2173.33
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.183462 0.000389 0.143833 0.220748 0.182206 1163.06 1267.08 1.001
r(A<->C){all} 0.110204 0.001109 0.043392 0.171005 0.108183 354.89 388.38 1.001
r(A<->G){all} 0.246605 0.001989 0.166582 0.337070 0.243894 253.86 301.22 1.000
r(A<->T){all} 0.045626 0.000233 0.017113 0.075440 0.043929 595.60 617.03 1.000
r(C<->G){all} 0.020197 0.000210 0.000284 0.048081 0.016831 523.87 556.08 1.001
r(C<->T){all} 0.523927 0.002404 0.428251 0.617296 0.524715 245.51 322.60 1.000
r(G<->T){all} 0.053440 0.000269 0.022645 0.085520 0.052112 768.15 788.42 1.001
pi(A){all} 0.199937 0.000177 0.175628 0.227185 0.199565 832.31 840.31 1.000
pi(C){all} 0.169536 0.000142 0.146677 0.193069 0.169417 717.97 724.16 1.000
pi(G){all} 0.214993 0.000185 0.190674 0.242989 0.214665 828.76 939.27 1.000
pi(T){all} 0.415534 0.000269 0.380532 0.445067 0.415751 943.66 978.91 1.000
alpha{1,2} 0.407268 0.100294 0.000272 0.986731 0.324815 845.50 898.09 1.003
alpha{3} 1.731100 1.065861 0.301086 3.797862 1.471244 775.01 838.33 1.001
pinvar{all} 0.304164 0.019745 0.014211 0.534851 0.309141 652.17 671.70 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C14
2 -- C65
3 -- C598
4 -- C287
5 -- C189
6 -- C195
7 -- C325
8 -- C71
9 -- C589
10 -- C203
11 -- C207
12 -- C599
13 -- C331
14 -- C565
15 -- C381
16 -- C224
17 -- C211
18 -- C338
19 -- C81
20 -- C68
21 -- C63
22 -- C504
23 -- C543
24 -- C223
25 -- C344
26 -- C87
27 -- C206
28 -- C123
29 -- C528
30 -- C235
31 -- C350
32 -- C93
33 -- C31
34 -- C571
35 -- C183
36 -- C552
37 -- C247
38 -- C356
39 -- C99
40 -- C482
41 -- C243
42 -- C576
43 -- C259
44 -- C362
45 -- C60
46 -- C105
47 -- C620
48 -- C303
49 -- C600
50 -- C271
51 -- C368
52 -- C111
53 -- C159
54 -- C619
55 -- C624
56 -- C369
57 -- C283
58 -- C374
59 -- C117
60 -- C52
61 -- C32
62 -- C313
63 -- C551
64 -- C380
65 -- C34
66 -- C27
67 -- C641
68 -- C141
69 -- C417
70 -- C347
71 -- C4
72 -- C385
73 -- C129
74 -- C291
75 -- C483
76 -- C377
77 -- C583
78 -- C559
79 -- C391
80 -- C135
81 -- C441
82 -- C549
83 -- C407
84 -- C595
85 -- C397
86 -- C70
87 -- C591
88 -- C615
89 -- C575
90 -- C437
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
--------------------------------------------------------------------------------
1 -- .**********************************************************************
2 -- .*.....................................................................
3 -- ..*....................................................................
4 -- ...*...................................................................
5 -- ....*..................................................................
6 -- .....*.................................................................
7 -- ......*................................................................
8 -- .......*...............................................................
9 -- ........*..............................................................
10 -- .........*.............................................................
11 -- ..........*............................................................
12 -- ...........*...........................................................
13 -- ............*..........................................................
14 -- .............*.........................................................
15 -- ..............*........................................................
16 -- ...............*.......................................................
17 -- ................*......................................................
18 -- .................*.....................................................
19 -- ..................*....................................................
20 -- ...................*...................................................
21 -- ....................*..................................................
22 -- .....................*.................................................
23 -- ......................*................................................
24 -- .......................*...............................................
25 -- ........................*..............................................
26 -- .........................*.............................................
27 -- ..........................*............................................
28 -- ...........................*...........................................
29 -- ............................*..........................................
30 -- .............................*.........................................
31 -- ..............................*........................................
32 -- ...............................*.......................................
33 -- ................................*......................................
34 -- .................................*.....................................
35 -- ..................................*....................................
36 -- ...................................*...................................
37 -- ....................................*..................................
38 -- .....................................*.................................
39 -- ......................................*................................
40 -- .......................................*...............................
41 -- ........................................*..............................
42 -- .........................................*.............................
43 -- ..........................................*............................
44 -- ...........................................*...........................
45 -- ............................................*..........................
46 -- .............................................*.........................
47 -- ..............................................*........................
48 -- ...............................................*.......................
49 -- ................................................*......................
50 -- .................................................*.....................
51 -- ..................................................*....................
52 -- ...................................................*...................
53 -- ....................................................*..................
54 -- .....................................................*.................
55 -- ......................................................*................
56 -- .......................................................*...............
57 -- ........................................................*..............
58 -- .........................................................*.............
59 -- ..........................................................*............
60 -- ...........................................................*...........
61 -- ............................................................*..........
62 -- .............................................................*.........
63 -- ..............................................................*........
64 -- ...............................................................*.......
65 -- ................................................................*......
66 -- .................................................................*.....
67 -- ..................................................................*....
68 -- ...................................................................*...
69 -- ....................................................................*..
70 -- .....................................................................*.
71 -- ......................................................................*
72 -- .......................................................................
73 -- .......................................................................
74 -- .......................................................................
75 -- .......................................................................
76 -- .......................................................................
77 -- .......................................................................
78 -- .......................................................................
79 -- .......................................................................
80 -- .......................................................................
81 -- .......................................................................
82 -- .......................................................................
83 -- .......................................................................
84 -- .......................................................................
85 -- .......................................................................
86 -- .......................................................................
87 -- .......................................................................
88 -- .......................................................................
89 -- .......................................................................
90 -- .......................................................................
91 -- ..........*...................*..................................*....*
92 -- ...................................*...........*.......................
93 -- .**************************.************************.*****.************
94 -- .**************************.******************************.************
95 -- ..............................*..................................*....*
96 -- .......*...............................................................
97 -- .*********.***************..**.*********************.*****.******.****.
98 -- .*********************************************************.************
99 -- ..............................*..................................*.....
100 -- ......*.....*..........................................................
101 -- ...........*....................................*......................
102 -- ................................*..................................*...
103 -- ..*....................................................................
104 -- ......*.....*....*......*.........**.*.....*...*..*....*.*...*..*....*.
105 -- ...................................................*..............*....
106 -- ......*.....*....*......*.........**.*.....*...*..*....*.*...*.......*.
107 -- .*********.***************..**.********************..*****.******..***.
108 -- .*********.***************..**.********************..*****.******.****.
109 -- ..........*...............*...*..................................*....*
110 -- .*************************..************************.*****.************
111 -- .*********.****************.**.*********************.*****.******.****.
112 -- ......*.....*..........................................................
113 -- .*****.***.*.****.******.*..**.***..*.*****.***.**...**.*..**.**...**..
114 -- ............*..........................................................
115 -- ......*................................................................
116 -- .*********.***************..**.********************..*****.******..***.
117 -- ..*****.**.***.****..*****..**.*.***********.******..*****...**.*...**.
118 -- ..****..**.*.*.**.*..***.*..**.*.*..*.*****..**.**...**.*.....*.....*..
119 -- .............................*......*..................................
120 -- ...................................................*..............*....
121 -- ..*****.**.***.****..*****..**.*.***********.******..*****...**.....**.
122 -- .*****.***.*.****.******.*..**.***..*.*****.***.**.*.**.*..**.**..***..
123 -- .*****.***.*.*************..**.*********************.*****.******.****.
124 -- .*********.***************..**.********************..*****.*****...***.
125 -- .*********.***************..**.*********************.*****.******.****.
126 -- .*****.***.*.****.******.*..**.***..*.*****.***.**.*.**.*..**.***.***..
--------------------------------------------------------------------------------
ID -- Partition (continued)
--------------------------------------------------------------------------------
1 -- *******************
2 -- ...................
3 -- ...................
4 -- ...................
5 -- ...................
6 -- ...................
7 -- ...................
8 -- ...................
9 -- ...................
10 -- ...................
11 -- ...................
12 -- ...................
13 -- ...................
14 -- ...................
15 -- ...................
16 -- ...................
17 -- ...................
18 -- ...................
19 -- ...................
20 -- ...................
21 -- ...................
22 -- ...................
23 -- ...................
24 -- ...................
25 -- ...................
26 -- ...................
27 -- ...................
28 -- ...................
29 -- ...................
30 -- ...................
31 -- ...................
32 -- ...................
33 -- ...................
34 -- ...................
35 -- ...................
36 -- ...................
37 -- ...................
38 -- ...................
39 -- ...................
40 -- ...................
41 -- ...................
42 -- ...................
43 -- ...................
44 -- ...................
45 -- ...................
46 -- ...................
47 -- ...................
48 -- ...................
49 -- ...................
50 -- ...................
51 -- ...................
52 -- ...................
53 -- ...................
54 -- ...................
55 -- ...................
56 -- ...................
57 -- ...................
58 -- ...................
59 -- ...................
60 -- ...................
61 -- ...................
62 -- ...................
63 -- ...................
64 -- ...................
65 -- ...................
66 -- ...................
67 -- ...................
68 -- ...................
69 -- ...................
70 -- ...................
71 -- ...................
72 -- *..................
73 -- .*.................
74 -- ..*................
75 -- ...*...............
76 -- ....*..............
77 -- .....*.............
78 -- ......*............
79 -- .......*...........
80 -- ........*..........
81 -- .........*.........
82 -- ..........*........
83 -- ...........*.......
84 -- ............*......
85 -- .............*.....
86 -- ..............*....
87 -- ...............*...
88 -- ................*..
89 -- .................*.
90 -- ..................*
91 -- ...................
92 -- ...................
93 -- *******************
94 -- *******************
95 -- ...................
96 -- ..............*....
97 -- *******************
98 -- *******************
99 -- ...................
100 -- ....*..............
101 -- ...................
102 -- ...................
103 -- ...............*...
104 -- ....*..............
105 -- ...................
106 -- ....*..............
107 -- ********.**********
108 -- *******************
109 -- ...................
110 -- *******************
111 -- *******************
112 -- ...................
113 -- ****.***.**********
114 -- ....*..............
115 -- ....*..............
116 -- *******************
117 -- *.******.*****.***.
118 -- *.**.***.*****.***.
119 -- ...................
120 -- ........*..........
121 -- *.******.*****.***.
122 -- ****.**************
123 -- ****.**************
124 -- ********.**********
125 -- ********.**********
126 -- ****.**************
--------------------------------------------------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
-----------------------------------------------------------------
91 3002 1.000000 0.000000 1.000000 1.000000 2
92 3002 1.000000 0.000000 1.000000 1.000000 2
93 3002 1.000000 0.000000 1.000000 1.000000 2
94 3002 1.000000 0.000000 1.000000 1.000000 2
95 3002 1.000000 0.000000 1.000000 1.000000 2
96 3001 0.999667 0.000471 0.999334 1.000000 2
97 2994 0.997335 0.000942 0.996669 0.998001 2
98 2826 0.941372 0.010364 0.934044 0.948701 2
99 2718 0.905396 0.005653 0.901399 0.909394 2
100 2688 0.895403 0.074432 0.842771 0.948035 2
101 2466 0.821452 0.023555 0.804797 0.838108 2
102 2449 0.815789 0.011777 0.807462 0.824117 2
103 2421 0.806462 0.000471 0.806129 0.806795 2
104 1924 0.640906 0.046167 0.608261 0.673551 2
105 1713 0.570620 0.045696 0.538308 0.602931 2
106 1322 0.440373 0.037687 0.413724 0.467022 2
107 1276 0.425050 0.061242 0.381746 0.468354 2
108 1117 0.372085 0.030621 0.350433 0.393738 2
109 1021 0.340107 0.016488 0.328448 0.351765 2
110 1009 0.336109 0.018373 0.323118 0.349101 2
111 969 0.322785 0.033447 0.299134 0.346436 2
112 968 0.322452 0.006595 0.317788 0.327115 2
113 960 0.319787 0.019786 0.305796 0.333777 2
114 946 0.315123 0.023555 0.298468 0.331779 2
115 939 0.312791 0.001413 0.311792 0.313791 2
116 841 0.280147 0.025910 0.261825 0.298468 2
117 819 0.272818 0.011777 0.264490 0.281146 2
118 793 0.264157 0.030621 0.242505 0.285809 2
119 582 0.193871 0.020728 0.179214 0.208528 2
120 510 0.169887 0.018844 0.156562 0.183211 2
121 428 0.142572 0.016017 0.131246 0.153897 2
122 416 0.138574 0.071606 0.087941 0.189207 2
123 413 0.137575 0.098458 0.067955 0.207195 2
124 381 0.126915 0.034390 0.102598 0.151233 2
125 302 0.100600 0.009422 0.093937 0.107262 2
126 247 0.082278 0.043811 0.051299 0.113258 2
-----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
--------------------------------------------------------------------------------------------
length{all}[1] 0.000584 0.000000 0.000000 0.001750 0.000395 1.003 2
length{all}[2] 0.000592 0.000000 0.000000 0.001822 0.000407 1.000 2
length{all}[3] 0.000696 0.000000 0.000000 0.001991 0.000500 1.000 2
length{all}[4] 0.001116 0.000001 0.000035 0.002664 0.000932 1.000 2
length{all}[5] 0.000576 0.000000 0.000001 0.001790 0.000396 1.000 2
length{all}[6] 0.001137 0.000001 0.000054 0.002753 0.000946 1.000 2
length{all}[7] 0.001697 0.000001 0.000188 0.003717 0.001478 1.000 2
length{all}[8] 0.000560 0.000000 0.000000 0.001670 0.000385 1.000 2
length{all}[9] 0.000566 0.000000 0.000000 0.001690 0.000393 1.003 2
length{all}[10] 0.000578 0.000000 0.000001 0.001690 0.000385 1.001 2
length{all}[11] 0.005573 0.000003 0.002307 0.009093 0.005426 1.002 2
length{all}[12] 0.000665 0.000000 0.000000 0.001933 0.000481 1.000 2
length{all}[13] 0.000586 0.000000 0.000000 0.001765 0.000411 1.000 2
length{all}[14] 0.000552 0.000000 0.000000 0.001714 0.000378 1.000 2
length{all}[15] 0.005673 0.000004 0.002603 0.009608 0.005430 1.002 2
length{all}[16] 0.000572 0.000000 0.000000 0.001674 0.000394 1.000 2
length{all}[17] 0.001148 0.000001 0.000030 0.002764 0.000928 1.001 2
length{all}[18] 0.000555 0.000000 0.000000 0.001612 0.000388 1.000 2
length{all}[19] 0.000556 0.000000 0.000000 0.001739 0.000357 1.000 2
length{all}[20] 0.001157 0.000001 0.000012 0.002722 0.000968 1.001 2
length{all}[21] 0.000568 0.000000 0.000000 0.001798 0.000394 1.005 2
length{all}[22] 0.000565 0.000000 0.000000 0.001761 0.000378 1.001 2
length{all}[23] 0.000538 0.000000 0.000001 0.001651 0.000366 1.000 2
length{all}[24] 0.000589 0.000000 0.000000 0.001736 0.000414 1.000 2
length{all}[25] 0.000565 0.000000 0.000000 0.001647 0.000408 1.001 2
length{all}[26] 0.000561 0.000000 0.000000 0.001723 0.000377 1.000 2
length{all}[27] 0.006394 0.000004 0.002945 0.010695 0.006087 1.003 2
length{all}[28] 0.000770 0.000001 0.000001 0.002330 0.000532 1.000 2
length{all}[29] 0.000560 0.000000 0.000000 0.001624 0.000409 1.000 2
length{all}[30] 0.002759 0.000002 0.000656 0.005430 0.002551 1.000 2
length{all}[31] 0.000588 0.000000 0.000001 0.001705 0.000401 1.000 2
length{all}[32] 0.000572 0.000000 0.000001 0.001665 0.000412 1.000 2
length{all}[33] 0.000678 0.000000 0.000000 0.001975 0.000470 1.001 2
length{all}[34] 0.000569 0.000000 0.000000 0.001674 0.000402 1.001 2
length{all}[35] 0.001149 0.000001 0.000035 0.002659 0.000965 1.001 2
length{all}[36] 0.000546 0.000000 0.000000 0.001677 0.000392 1.000 2
length{all}[37] 0.004432 0.000003 0.001490 0.007776 0.004174 1.002 2
length{all}[38] 0.000572 0.000000 0.000000 0.001780 0.000392 1.000 2
length{all}[39] 0.000551 0.000000 0.000000 0.001694 0.000370 1.002 2
length{all}[40] 0.000564 0.000000 0.000000 0.001625 0.000384 1.000 2
length{all}[41] 0.002305 0.000001 0.000322 0.004467 0.002124 1.000 2
length{all}[42] 0.000575 0.000000 0.000000 0.001710 0.000380 1.002 2
length{all}[43] 0.000569 0.000000 0.000000 0.001733 0.000401 1.000 2
length{all}[44] 0.000586 0.000000 0.000000 0.001718 0.000411 1.000 2
length{all}[45] 0.000571 0.000000 0.000000 0.001796 0.000375 1.000 2
length{all}[46] 0.000576 0.000000 0.000000 0.001775 0.000401 1.000 2
length{all}[47] 0.000563 0.000000 0.000000 0.001685 0.000393 1.000 2
length{all}[48] 0.000562 0.000000 0.000000 0.001713 0.000387 1.002 2
length{all}[49] 0.000690 0.000000 0.000001 0.002098 0.000460 1.000 2
length{all}[50] 0.000552 0.000000 0.000001 0.001647 0.000373 1.001 2
length{all}[51] 0.000548 0.000000 0.000000 0.001705 0.000357 1.000 2
length{all}[52] 0.002796 0.000002 0.000653 0.005472 0.002558 1.000 2
length{all}[53] 0.010377 0.000007 0.005471 0.015704 0.010145 1.000 2
length{all}[54] 0.001152 0.000001 0.000009 0.002842 0.000956 1.000 2
length{all}[55] 0.000587 0.000000 0.000000 0.001771 0.000395 1.001 2
length{all}[56] 0.000580 0.000000 0.000000 0.001659 0.000407 1.000 2
length{all}[57] 0.000548 0.000000 0.000000 0.001714 0.000352 1.004 2
length{all}[58] 0.000590 0.000000 0.000000 0.001763 0.000425 1.002 2
length{all}[59] 0.001094 0.000001 0.000010 0.002561 0.000938 1.001 2
length{all}[60] 0.002818 0.000002 0.000523 0.005298 0.002579 1.003 2
length{all}[61] 0.001203 0.000001 0.000038 0.003008 0.000999 1.000 2
length{all}[62] 0.000545 0.000000 0.000001 0.001594 0.000383 1.001 2
length{all}[63] 0.000573 0.000000 0.000000 0.001624 0.000413 1.001 2
length{all}[64] 0.000569 0.000000 0.000000 0.001774 0.000389 1.000 2
length{all}[65] 0.003205 0.000002 0.000945 0.006004 0.002943 1.001 2
length{all}[66] 0.000558 0.000000 0.000000 0.001710 0.000365 1.001 2
length{all}[67] 0.000810 0.000001 0.000001 0.002291 0.000597 1.003 2
length{all}[68] 0.001242 0.000001 0.000038 0.003023 0.001023 1.001 2
length{all}[69] 0.000554 0.000000 0.000000 0.001681 0.000390 1.000 2
length{all}[70] 0.000572 0.000000 0.000000 0.001727 0.000386 1.000 2
length{all}[71] 0.001191 0.000001 0.000025 0.002649 0.001024 1.002 2
length{all}[72] 0.002317 0.000001 0.000371 0.004663 0.002123 1.004 2
length{all}[73] 0.000551 0.000000 0.000000 0.001635 0.000400 1.000 2
length{all}[74] 0.000575 0.000000 0.000000 0.001762 0.000394 1.000 2
length{all}[75] 0.000557 0.000000 0.000000 0.001758 0.000362 1.006 2
length{all}[76] 0.000600 0.000000 0.000000 0.001715 0.000403 1.000 2
length{all}[77] 0.001106 0.000001 0.000039 0.002627 0.000922 1.000 2
length{all}[78] 0.000568 0.000000 0.000000 0.001647 0.000389 1.000 2
length{all}[79] 0.001672 0.000001 0.000229 0.003594 0.001507 1.000 2
length{all}[80] 0.001677 0.000001 0.000198 0.003591 0.001492 1.002 2
length{all}[81] 0.000566 0.000000 0.000000 0.001642 0.000391 1.000 2
length{all}[82] 0.000570 0.000000 0.000000 0.001704 0.000387 1.000 2
length{all}[83] 0.001140 0.000001 0.000019 0.002731 0.000951 1.000 2
length{all}[84] 0.001108 0.000001 0.000021 0.002658 0.000925 1.001 2
length{all}[85] 0.000605 0.000000 0.000000 0.001839 0.000409 1.002 2
length{all}[86] 0.000584 0.000000 0.000000 0.001753 0.000401 1.000 2
length{all}[87] 0.000690 0.000000 0.000000 0.002090 0.000478 1.003 2
length{all}[88] 0.000587 0.000000 0.000001 0.001793 0.000419 1.000 2
length{all}[89] 0.000565 0.000000 0.000001 0.001633 0.000400 1.001 2
length{all}[90] 0.001692 0.000001 0.000200 0.003700 0.001517 1.000 2
length{all}[91] 0.002822 0.000002 0.000514 0.005400 0.002591 1.007 2
length{all}[92] 0.002334 0.000002 0.000448 0.004844 0.002095 1.003 2
length{all}[93] 0.002494 0.000002 0.000532 0.005076 0.002272 1.000 2
length{all}[94] 0.003453 0.000002 0.000864 0.006124 0.003289 1.000 2
length{all}[95] 0.008370 0.000005 0.004282 0.012890 0.008149 1.000 2
length{all}[96] 0.001716 0.000001 0.000125 0.003635 0.001505 1.002 2
length{all}[97] 0.002681 0.000002 0.000527 0.005311 0.002487 1.000 2
length{all}[98] 0.001616 0.000001 0.000067 0.003749 0.001392 1.000 2
length{all}[99] 0.001121 0.000001 0.000020 0.002705 0.000940 1.000 2
length{all}[100] 0.001739 0.000001 0.000170 0.003735 0.001573 1.000 2
length{all}[101] 0.001120 0.000001 0.000028 0.002781 0.000941 1.001 2
length{all}[102] 0.001150 0.000001 0.000008 0.002746 0.000970 1.002 2
length{all}[103] 0.001154 0.000001 0.000040 0.002677 0.000967 1.000 2
length{all}[104] 0.001508 0.000001 0.000021 0.003431 0.001300 1.000 2
length{all}[105] 0.001136 0.000001 0.000035 0.002799 0.000924 0.999 2
length{all}[106] 0.001436 0.000001 0.000004 0.003266 0.001223 1.007 2
length{all}[107] 0.001059 0.000001 0.000003 0.002654 0.000861 1.013 2
length{all}[108] 0.001197 0.000001 0.000081 0.002874 0.000973 0.999 2
length{all}[109] 0.000649 0.000000 0.000002 0.001922 0.000470 0.999 2
length{all}[110] 0.000640 0.000000 0.000001 0.001833 0.000462 1.002 2
length{all}[111] 0.000585 0.000000 0.000001 0.001714 0.000405 0.999 2
length{all}[112] 0.000579 0.000000 0.000000 0.001623 0.000430 1.001 2
length{all}[113] 0.001159 0.000001 0.000083 0.002746 0.001032 1.001 2
length{all}[114] 0.000551 0.000000 0.000001 0.001655 0.000391 0.999 2
length{all}[115] 0.000587 0.000000 0.000001 0.001660 0.000429 1.001 2
length{all}[116] 0.000744 0.000001 0.000001 0.002253 0.000513 0.999 2
length{all}[117] 0.001114 0.000001 0.000015 0.002558 0.000975 1.008 2
length{all}[118] 0.001145 0.000001 0.000007 0.002721 0.000956 0.999 2
length{all}[119] 0.001134 0.000001 0.000010 0.002868 0.000906 0.999 2
length{all}[120] 0.000764 0.000001 0.000002 0.002111 0.000537 1.026 2
length{all}[121] 0.001090 0.000001 0.000051 0.002727 0.000867 1.006 2
length{all}[122] 0.001172 0.000001 0.000002 0.002868 0.000956 1.041 2
length{all}[123] 0.001734 0.000001 0.000159 0.003761 0.001591 0.998 2
length{all}[124] 0.001156 0.000001 0.000028 0.003038 0.000994 1.012 2
length{all}[125] 0.000604 0.000000 0.000002 0.001704 0.000402 0.997 2
length{all}[126] 0.001270 0.000001 0.000029 0.003003 0.000957 0.997 2
--------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.023620
Maximum standard deviation of split frequencies = 0.098458
Average PSRF for parameter values (excluding NA and >10.0) = 1.001
Maximum PSRF for parameter values = 1.041
Clade credibility values:
/--------------------------------------------------------------------- C14 (1)
|
|--------------------------------------------------------------------- C117 (59)
|
| /------------------------------ C65 (2)
| |
| | /---------- C598 (3)
| |---------81--------+
| | \---------- C591 (87)
| |
| |------------------------------ C287 (4)
| |
| |------------------------------ C189 (5)
| |
| |------------------------------ C195 (6)
| |
| | /---------- C325 (7)
| | |
| | /----90---+---------- C331 (13)
| | | |
| | | \---------- C377 (76)
| | |
| | |-------------------- C338 (18)
| | |
| | |-------------------- C344 (25)
| | |
| | |-------------------- C183 (35)
| | |
| | | /---------- C552 (36)
| | |---100---+
| | | \---------- C303 (48)
| | |
| |----64---+-------------------- C356 (38)
| | |
| | |-------------------- C362 (44)
| | |
| | |-------------------- C368 (51)
| | |
| | |-------------------- C369 (56)
| | |
| | |-------------------- C374 (58)
| | |
| | |-------------------- C313 (62)
| | |
| | |-------------------- C34 (65)
| | |
| | \-------------------- C347 (70)
| |
| | /---------- C71 (8)
| |--------100--------+
| | \---------- C70 (86)
| |
| |------------------------------ C589 (9)
| |
| |------------------------------ C203 (10)
| |
| | /---------- C599 (12)
| |---------82--------+
| | \---------- C600 (49)
| |
| |------------------------------ C565 (14)
| |
| |------------------------------ C381 (15)
| |
| |------------------------------ C224 (16)
| |
| |------------------------------ C211 (17)
| |
| |------------------------------ C81 (19)
| |
| |------------------------------ C68 (20)
| |
| |------------------------------ C63 (21)
| |
| |------------------------------ C504 (22)
| |
| |------------------------------ C543 (23)
| |
| |------------------------------ C223 (24)
| |
| |------------------------------ C87 (26)
| |
| |------------------------------ C528 (29)
+ |
| /---100--+------------------------------ C235 (30)
| | |
| | |------------------------------ C93 (32)
| | |
| | | /---------- C31 (33)
| | |---------82--------+
| | | \---------- C141 (68)
| | |
| | |------------------------------ C571 (34)
| | |
| | |------------------------------ C247 (37)
| | |
| | |------------------------------ C99 (39)
| | |
| | |------------------------------ C482 (40)
| | |
| | |------------------------------ C243 (41)
| | |
| | |------------------------------ C576 (42)
| | |
| | |------------------------------ C259 (43)
| | |
| | |------------------------------ C60 (45)
| | |
| | |------------------------------ C105 (46)
| | |
| | |------------------------------ C620 (47)
| | |
| | |------------------------------ C271 (50)
| | |
| | | /---------- C111 (52)
| | |---------57--------+
| | | \---------- C641 (67)
| | |
| | |------------------------------ C619 (54)
| | |
| | |------------------------------ C624 (55)
| | |
| | |------------------------------ C283 (57)
| | |
| | |------------------------------ C52 (60)
| | |
| | |------------------------------ C32 (61)
| | |
| | |------------------------------ C551 (63)
| /---100---+ |
| | | |------------------------------ C380 (64)
| | | |
| | | |------------------------------ C417 (69)
| | | |
| | | |------------------------------ C385 (72)
| | | |
| | | |------------------------------ C129 (73)
| | | |
| | | |------------------------------ C291 (74)
| | | |
| | | |------------------------------ C483 (75)
| | | |
| | | |------------------------------ C583 (77)
| | | |
| | | |------------------------------ C559 (78)
| | | |
| | | |------------------------------ C391 (79)
| | | |
| | | |------------------------------ C135 (80)
| | | |
| | | |------------------------------ C441 (81)
| | | |
| | | |------------------------------ C549 (82)
| /---100---+ | |
| | | | |------------------------------ C407 (83)
| | | | |
| | | | |------------------------------ C595 (84)
| | | | |
| | | | |------------------------------ C397 (85)
| | | | |
| | | | |------------------------------ C615 (88)
| | | | |
| | | | |------------------------------ C575 (89)
| | | | |
| | | | \------------------------------ C437 (90)
| | | |
\----94---+ | | /------------------------------ C207 (11)
| | | |
| | | | /---------- C350 (31)
| | |---100--+ /----91---+
| | | | | \---------- C27 (66)
| | | \---100---+
| | | \-------------------- C4 (71)
| | |
| | \--------------------------------------- C206 (27)
| |
| \------------------------------------------------- C159 (53)
|
\----------------------------------------------------------- C123 (28)
Phylogram (based on average branch lengths):
/- C14 (1)
|
|--- C117 (59)
|
| /-- C65 (2)
| |
| | /-- C598 (3)
| |---+
| | \- C591 (87)
| |
| |---- C287 (4)
| |
| |-- C189 (5)
| |
| |---- C195 (6)
| |
| | /----- C325 (7)
| | |
| | /-----+- C331 (13)
| | | |
| | | \- C377 (76)
| | |
| | |- C338 (18)
| | |
| | |- C344 (25)
| | |
| | |--- C183 (35)
| | |
| | | /- C552 (36)
| | |-------+
| | | \- C303 (48)
| | |
| |----+- C356 (38)
| | |
| | |- C362 (44)
| | |
| | |- C368 (51)
| | |
| | |- C369 (56)
| | |
| | |- C374 (58)
| | |
| | |- C313 (62)
| | |
| | |----------- C34 (65)
| | |
| | \- C347 (70)
| |
| | /- C71 (8)
| |-----+
| | \- C70 (86)
| |
| |-- C589 (9)
| |
| |-- C203 (10)
| |
| | /- C599 (12)
| |---+
| | \- C600 (49)
| |
| |-- C565 (14)
| |
| |-------------------- C381 (15)
| |
| |-- C224 (16)
| |
| |---- C211 (17)
| |
| |-- C81 (19)
| |
| |---- C68 (20)
| |
| |-- C63 (21)
| |
| |-- C504 (22)
| |
| |-- C543 (23)
| |
| |-- C223 (24)
| |
| |-- C87 (26)
| |
| |-- C528 (29)
+ |
| /--------+--------- C235 (30)
| | |
| | |-- C93 (32)
| | |
| | | /- C31 (33)
| | |---+
| | | \--- C141 (68)
| | |
| | |-- C571 (34)
| | |
| | |--------------- C247 (37)
| | |
| | |-- C99 (39)
| | |
| | |-- C482 (40)
| | |
| | |-------- C243 (41)
| | |
| | |-- C576 (42)
| | |
| | |-- C259 (43)
| | |
| | |-- C60 (45)
| | |
| | |-- C105 (46)
| | |
| | |-- C620 (47)
| | |
| | |-- C271 (50)
| | |
| | | /--------- C111 (52)
| | |---+
| | | \-- C641 (67)
| | |
| | |---- C619 (54)
| | |
| | |-- C624 (55)
| | |
| | |- C283 (57)
| | |
| | |---------- C52 (60)
| | |
| | |---- C32 (61)
| | |
| | |-- C551 (63)
| /-------+ |
| | | |-- C380 (64)
| | | |
| | | |-- C417 (69)
| | | |
| | | |-------- C385 (72)
| | | |
| | | |-- C129 (73)
| | | |
| | | |-- C291 (74)
| | | |
| | | |-- C483 (75)
| | | |
| | | |---- C583 (77)
| | | |
| | | |-- C559 (78)
| | | |
| | | |------ C391 (79)
| | | |
| | | |------ C135 (80)
| | | |
| | | |-- C441 (81)
| | | |
| | | |-- C549 (82)
| /-----------+ | |
| | | | |---- C407 (83)
| | | | |
| | | | |---- C595 (84)
| | | | |
| | | | |-- C397 (85)
| | | | |
| | | | |-- C615 (88)
| | | | |
| | | | |-- C575 (89)
| | | | |
| | | | \------ C437 (90)
| | | |
\----+ | | /------------------- C207 (11)
| | | |
| | | | /- C350 (31)
| | |---------+ /---+
| | | | | \- C27 (66)
| | | \----------------------------+
| | | \---- C4 (71)
| | |
| | \---------------------- C206 (27)
| |
| \------------------------------------- C159 (53)
|
\-- C123 (28)
|-----------------| 0.005 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
Running FUBAR...
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\
***************** TYPES OF STANDARD ANALYSES *****************
(1) Selection Analyses
(2) Evolutionary Hypothesis Testing
(3) Relative evolutionary rate inference
(4) Coevolutionary analysis
(5) Basic Analyses
(6) Codon Selection Analyses
(7) Compartmentalization
(8) Data File Tools
(9) Miscellaneous
(10) Model Comparison
(11) Kernel Analysis Tools
(12) Molecular Clock
(13) Phylogeny Reconstruction
(14) Positive Selection
(15) Recombination
(16) Selection/Recombination
(17) Relative Rate
(18) Relative Ratio
(19) Substitution Rates
Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' *****************
(1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution).
(2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood).
(3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting).
(4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection).
(5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification).
(6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood).
(7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation).
Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types):
Analysis Description
--------------------
Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a
coding sequence alignment to determine whether some sites have been
subject to pervasive purifying or diversifying selection. v2.1
introduces two more methods for estimating the posterior distribution of
grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation
Bayes approximation (fastest). Please note that a FUBAR analysis
generates a cache and a results JSON file in the same directory as
directory as the original alignment. HyPhy needs to have write
privileges to this directory. For example if the original file is in
/home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there
will also exist FUBAR-generated files
/home/sergei/FUBAR/data/pol.nex.FUBAR.json,
/home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide
checkpointing so that a partially completed analysis can be restarted.
- __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree
(one per partition)
- __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring
selection (2013), Mol Biol Evol. 30(5):1196-205
- __Written by__: Sergei L Kosakovsky Pond
- __Contact Information__: spond@temple.edu
- __Analysis Version__: 2.1
####Choose Genetic Code
1. [**Universal**] Universal code. (Genebank transl_table=1).
2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2).
3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3).
4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4).
5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5).
6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6).
7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9).
8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10).
9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12).
10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13).
11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14).
12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15).
13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16).
14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21).
15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22).
16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23).
17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24).
18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25).
19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26).
>Please choose an option (or press q to cancel selection):
>Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`)
>A tree was found in the data file: `(C14,C117,((((C65,(C598,C591),C287,C189,C195,((C325,C331,C377),C338,C344,C183,(C552,C303),C356,C362,C368,C369,C374,C313,C34,C347),(C71,C70),C589,C203,(C599,C600),C565,C381,C224,C211,C81,C68,C63,C504,C543,C223,C87,C528,C235,C93,(C31,C141),C571,C247,C99,C482,C243,C576,C259,C60,C105,C620,C271,(C111,C641),C619,C624,C283,C52,C32,C551,C380,C417,C385,C129,C291,C483,C583,C559,C391,C135,C441,C549,C407,C595,C397,C615,C575,C437),(C207,((C350,C27),C4)),C206),C159),C123))`
>Would you like to use it (y/n)?
>Loaded a multiple sequence alignment with **90** sequences, **280** codons, and **1** partitions from `/data//pss_subsets/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1.fna`
> FUBAR will write cache and result files to _/data//pss_subsets/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1.fna.FUBAR.json_, respectively
> Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer):
####Posterior estimation method
1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation)
2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed)
3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default)
>Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5):
### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model
* Log(L) = -2151.92, AIC-c = 4530.17 (113 estimated parameters)
* Tree length (expected substitutions/site) for partition 1 : 0.191
### Computing the phylogenetic likelihood function on the grid
* Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid
* Best scaling achieved for
* synonymous rate = 2.815
* non-synonymous rate = 0.357
* Computing conditional site likelihoods on a 20 x 20 rate grid
### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights
* Using the following settings
* Dirichlet alpha : 0.5
### Tabulating site-level results
| Codon | Partition | alpha | beta |Posterior prob for positive selection|
|:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:|
| 135 | 1 | 0.739 | 6.485 | Pos. posterior = 0.9564 |
----
## FUBAR inferred 1 sites subject to diversifying positive selection at posterior probability >= 0.9
Of these, 0.04 are expected to be false positives (95% confidence interval of 0-1 )
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.50 sec, SCORE=1000, Nseq=90, Len=280
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV4 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV99 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV43 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV71 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV0 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV69 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV41 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV59 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV75 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV5 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV98 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV87 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV89 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV95 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV25 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_CH_GDZHDM_1401_nsp3_VIPR_ALG4_1021395879_10165_11004_1_2014_01_04_China_Swine_PEDV_nsp3_VIPR_ALG4_AST13135_1_10177_11016_1_2015_09_China_Unknown_PEDV1 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV89 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV03 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV07 GGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV31 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV65 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV81 SGYVSRACKNVLLVGSFLTFFWSKLFSYTKFFWVIPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV24 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV11 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV38 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_mutant1_nsp3_VIPR_ALG4_AST13220_1_10177_11016_1_2015_09_China_Unknown_PEDV1 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV8 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWLNPGYVTPMFACLSLLS
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV3 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV04 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV23 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV44 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_mutant1_nsp3_VIPR_ALG4_AST13220_1_10177_11016_1_2015_09_China_Unknown_PEDV7 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV06 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV23 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV28 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV35 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV50 GGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_mutant2_nsp3_VIPR_ALG4_AST13226_1_9853_10692_1_2015_09_China_Unknown_PEDV3 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV1 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV83 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV52 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV47 SGYVSRACRNVLLVGFFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV56 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_mutant2_nsp3_VIPR_ALG4_AST13226_1_9853_10692_1_2015_09_China_Unknown_PEDV9 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV82 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV43 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV76 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV59 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV62 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV05 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV20 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV03 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV00 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV71 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV68 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV11 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV59 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV19 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV24 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV83 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV74 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV17 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV2 SGYVTRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV2 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV13 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV51 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV80 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV4 SGYVLRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV7 GGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV41 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV17 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV47 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV GGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV85 SGCVSRACRNVLLVGSFLTFFWSELVSYTKFFWVSPGYVTPMFACLSLLS
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV29 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV91 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV83 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV77 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV83 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV91 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPIFACLSLLS
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV35 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV41 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV49 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV07 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV95 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV97 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_CH_GDZHDM_1401_nsp3_VIPR_ALG4_1021395879_10165_11004_1_2014_01_04_China_Swine_PEDV_nsp3_VIPR_ALG4_AST13135_1_10177_11016_1_2015_09_China_Unknown_PEDV0 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV91 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV15 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV37 SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS
.* * ***:****** *******:*.*******: ******:********
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV4 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAGHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV99 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV43 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV71 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV0 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV69 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV41 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV59 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV75 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV5 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV98 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV87 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV89 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV95 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV25 SLLMFTLKHKTLFFQVFLIPALVVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_CH_GDZHDM_1401_nsp3_VIPR_ALG4_1021395879_10165_11004_1_2014_01_04_China_Swine_PEDV_nsp3_VIPR_ALG4_AST13135_1_10177_11016_1_2015_09_China_Unknown_PEDV1 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV89 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV03 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV07 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV31 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV65 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV81 PLLMFTLKHKTLFFQVFLIPAMIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV24 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV11 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV38 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_mutant1_nsp3_VIPR_ALG4_AST13220_1_10177_11016_1_2015_09_China_Unknown_PEDV1 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV8 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV3 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV04 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV23 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV44 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_mutant1_nsp3_VIPR_ALG4_AST13220_1_10177_11016_1_2015_09_China_Unknown_PEDV7 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV06 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV23 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAGHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV28 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV35 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV50 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_mutant2_nsp3_VIPR_ALG4_AST13226_1_9853_10692_1_2015_09_China_Unknown_PEDV3 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV1 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV83 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVHNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV52 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV47 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV56 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_mutant2_nsp3_VIPR_ALG4_AST13226_1_9853_10692_1_2015_09_China_Unknown_PEDV9 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV82 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV43 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV76 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV59 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV62 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV05 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV20 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV03 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV00 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV71 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV68 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV11 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV59 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAGHFDYHVSL
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV19 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV24 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV83 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV74 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV17 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAGHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV2 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV2 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV13 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV51 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV80 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV4 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV7 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV41 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV17 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV47 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV85 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV29 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV91 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV83 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV77 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV83 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV91 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV35 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV41 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV49 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV07 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV95 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV97 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_CH_GDZHDM_1401_nsp3_VIPR_ALG4_1021395879_10165_11004_1_2014_01_04_China_Swine_PEDV_nsp3_VIPR_ALG4_AST13135_1_10177_11016_1_2015_09_China_Unknown_PEDV0 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV91 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV15 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV37 SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL
.********************::*************:**** ********
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV4 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV99 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV43 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV71 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV0 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV69 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV41 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV59 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV75 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV5 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV98 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV87 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV89 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV95 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV25 MGFNAQGLVNIFVCFVVTILHGTYTWRFSNTPVSSVTYVVALLTAAYNYF
85_7_CH_GDZHDM_1401_nsp3_VIPR_ALG4_1021395879_10165_11004_1_2014_01_04_China_Swine_PEDV_nsp3_VIPR_ALG4_AST13135_1_10177_11016_1_2015_09_China_Unknown_PEDV1 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV89 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV03 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV07 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTTVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV31 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV65 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV81 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV24 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV11 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV38 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_mutant1_nsp3_VIPR_ALG4_AST13220_1_10177_11016_1_2015_09_China_Unknown_PEDV1 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV8 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV3 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV04 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV23 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV44 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_mutant1_nsp3_VIPR_ALG4_AST13220_1_10177_11016_1_2015_09_China_Unknown_PEDV7 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV06 MGFNAQGLVNIFVCFVVTILHGTYTWRFFTTPVSSVTYVVALLTAAYNYF
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV23 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV28 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV35 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV50 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPASSVTYVVALLTAAYNYF
85_7_mutant2_nsp3_VIPR_ALG4_AST13226_1_9853_10692_1_2015_09_China_Unknown_PEDV3 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV1 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV83 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV52 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALMTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV47 MGFNAQGLVNIFVCFVVTTLHGTYTWRFFNTPVSSVTYVVALLIAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV56 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_mutant2_nsp3_VIPR_ALG4_AST13226_1_9853_10692_1_2015_09_China_Unknown_PEDV9 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV82 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV43 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV76 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV59 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV62 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV05 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV20 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV03 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALMTAAYNYF
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV00 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV71 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV68 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV11 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV59 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV19 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV24 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV83 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV74 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV17 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV2 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV2 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV13 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV51 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV80 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV4 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV7 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPASSVTYVVALLTAAYNYF
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV41 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV17 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV47 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPASSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV85 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV29 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV91 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV83 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV77 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV83 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV91 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV35 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV41 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV49 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV07 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV95 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV97 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_CH_GDZHDM_1401_nsp3_VIPR_ALG4_1021395879_10165_11004_1_2014_01_04_China_Swine_PEDV_nsp3_VIPR_ALG4_AST13135_1_10177_11016_1_2015_09_China_Unknown_PEDV0 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV91 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV15 MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV37 MGFNAQGLVNIFVCFVVTILHGTYTRRFFNTPVSSVTYVVALLTAAYNYF
****************** ****** ** .*..* *******: ******
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV4 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV99 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV43 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV71 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV0 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV69 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV41 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV59 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV75 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV5 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV98 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV87 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV89 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV95 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV25 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_CH_GDZHDM_1401_nsp3_VIPR_ALG4_1021395879_10165_11004_1_2014_01_04_China_Swine_PEDV_nsp3_VIPR_ALG4_AST13135_1_10177_11016_1_2015_09_China_Unknown_PEDV1 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV89 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV03 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV07 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV31 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV65 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV81 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV24 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV11 YASDILSCAMTLFASVTGNWFVGVVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV38 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_mutant1_nsp3_VIPR_ALG4_AST13220_1_10177_11016_1_2015_09_China_Unknown_PEDV1 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV8 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV3 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV04 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV23 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV44 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_mutant1_nsp3_VIPR_ALG4_AST13220_1_10177_11016_1_2015_09_China_Unknown_PEDV7 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV06 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV23 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV28 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV35 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV50 YASDILSCAMTLFASVTGNWFVGAVCYKVAVYMALRFPTFVAIFGDIKSV
85_7_mutant2_nsp3_VIPR_ALG4_AST13226_1_9853_10692_1_2015_09_China_Unknown_PEDV3 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV1 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV83 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV52 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYIALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV47 YASDVLSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV56 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_mutant2_nsp3_VIPR_ALG4_AST13226_1_9853_10692_1_2015_09_China_Unknown_PEDV9 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV82 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV43 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV76 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV59 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV62 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV05 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV20 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV03 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYIALRFPTFVAIFGDIKSV
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV00 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV71 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV68 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV11 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV59 YASDTLSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV19 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV24 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV83 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV74 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV17 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV2 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV2 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV13 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV51 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV80 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV4 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV7 YASDILSCAMTLFASVTGNWFVGAVCYKVAVYMALRFPTFVAIFGDIKSV
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV41 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV17 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV47 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV YASDILSCAMTLFASVTGNWFVGAVCYKVAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV85 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV29 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV91 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV83 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV77 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV83 YAGDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV91 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV35 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV41 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV49 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV07 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV95 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV97 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_CH_GDZHDM_1401_nsp3_VIPR_ALG4_1021395879_10165_11004_1_2014_01_04_China_Swine_PEDV_nsp3_VIPR_ALG4_AST13135_1_10177_11016_1_2015_09_China_Unknown_PEDV0 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV91 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV15 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV37 YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV
**.* ******************.****.***:*****************
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV4 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV99 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV43 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV71 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV0 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV69 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV41 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV59 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV75 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV5 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV98 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV87 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV89 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV95 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV25 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_CH_GDZHDM_1401_nsp3_VIPR_ALG4_1021395879_10165_11004_1_2014_01_04_China_Swine_PEDV_nsp3_VIPR_ALG4_AST13135_1_10177_11016_1_2015_09_China_Unknown_PEDV1 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV89 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV03 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV07 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV31 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV65 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV81 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV24 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV11 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV38 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_mutant1_nsp3_VIPR_ALG4_AST13220_1_10177_11016_1_2015_09_China_Unknown_PEDV1 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV8 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV3 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV04 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV23 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV44 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_mutant1_nsp3_VIPR_ALG4_AST13220_1_10177_11016_1_2015_09_China_Unknown_PEDV7 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV06 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYSVSAAEFKYMVANGLR
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV23 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV28 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV35 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV50 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_mutant2_nsp3_VIPR_ALG4_AST13226_1_9853_10692_1_2015_09_China_Unknown_PEDV3 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV1 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV83 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV52 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV47 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV56 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_mutant2_nsp3_VIPR_ALG4_AST13226_1_9853_10692_1_2015_09_China_Unknown_PEDV9 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV82 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV43 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV76 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV59 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV62 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV05 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV20 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV03 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV00 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV71 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV68 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV11 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV59 MFCYLVLGYFTCCYYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV19 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV24 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV83 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV74 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV17 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV2 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV2 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV13 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV51 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV80 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV4 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV7 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV41 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV17 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV47 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLP
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV85 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV29 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV91 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV83 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV77 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV83 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV91 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV35 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV41 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV49 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV07 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV95 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV97 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_CH_GDZHDM_1401_nsp3_VIPR_ALG4_1021395879_10165_11004_1_2014_01_04_China_Swine_PEDV_nsp3_VIPR_ALG4_AST13135_1_10177_11016_1_2015_09_China_Unknown_PEDV0 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV91 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV15 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV37 MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR
*************:********************:**************
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV4 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV99 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV43 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV71 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV0 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV69 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV41 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV59 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV75 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV5 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV98 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV87 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV89 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV95 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV25 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_CH_GDZHDM_1401_nsp3_VIPR_ALG4_1021395879_10165_11004_1_2014_01_04_China_Swine_PEDV_nsp3_VIPR_ALG4_AST13135_1_10177_11016_1_2015_09_China_Unknown_PEDV1 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV89 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV03 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV07 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV31 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV65 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV81 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV24 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV11 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV38 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_mutant1_nsp3_VIPR_ALG4_AST13220_1_10177_11016_1_2015_09_China_Unknown_PEDV1 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV8 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV3 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV04 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV23 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV44 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_mutant1_nsp3_VIPR_ALG4_AST13220_1_10177_11016_1_2015_09_China_Unknown_PEDV7 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV06 APTGTFDSLLLSAKLIGIGGERNIKISSVQ
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV23 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV28 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV35 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV50 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_mutant2_nsp3_VIPR_ALG4_AST13226_1_9853_10692_1_2015_09_China_Unknown_PEDV3 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV1 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV83 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV52 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV47 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV56 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_mutant2_nsp3_VIPR_ALG4_AST13226_1_9853_10692_1_2015_09_China_Unknown_PEDV9 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV82 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV43 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV76 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV59 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV62 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV05 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV20 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV03 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV00 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV71 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV68 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV11 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV59 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV19 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV24 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV83 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV74 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV17 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV2 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV2 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV13 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV51 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV80 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV4 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV7 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV41 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV17 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV47 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV85 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV29 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
15V010_BEL_2015_nsp3_VIPR_ALG4_807013855_10190_11029_1_2015_01_Belgium_Swine_PEDV91 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV83 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV77 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV83 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV91 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
13_019349_nsp3_VIPR_ALG4_527290414_10189_11028_1_2013_05_29_USA_Swine_PEDV35 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV41 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV49 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV07 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV95 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3c_nsp3_VIPR_ALG4_QNL15260_1_10190_11029_1_2017_01_China_Swine_PEDV97 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_CH_GDZHDM_1401_nsp3_VIPR_ALG4_1021395879_10165_11004_1_2014_01_04_China_Swine_PEDV_nsp3_VIPR_ALG4_AST13135_1_10177_11016_1_2015_09_China_Unknown_PEDV0 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
17GXCZ_1ORF3d_nsp3_VIPR_ALG4_QNL15254_1_10190_11029_1_2017_01_China_Swine_PEDV91 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_A40_nsp3_VIPR_ALG4_AST13129_1_10177_11016_1_2015_09_China_Unknown_PEDV15 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV37 APTGTLDSLLLSAKLIGIGGERNIKISSVQ
*****:************************
>AH2012_12_nsp3_VIPR_ALG4_1020263108_10190_11029_1_2012_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGTTGTCCTCACTTTTGATGTTCACACTCAAGCATAAAACGTTGTTTTTCCAGGTCTTCTTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTAGAAGTCTACAATTATTTGGCAGGGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATATTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTCTTTAATACACCTGTGAGTTTTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTCTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTGGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_OK10240_6_2017_nsp3_VIPR_ALG4_AVI57395_1_10190_11029_1_2017_02_07_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGATTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Minnesota289_2014_nsp3_VIPR_ALG4_825144643_10145_10984_1_2014_04_02_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Minnesota79_2013_nsp3_VIPR_ALG4_658130512_10155_10994_1_2013_11_30_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >CH_SCGA_2017_nsp3_VIPR_ALG4_AZL47191_1_10190_11029_1_2017_01_05_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_GER_L01018_K01_15_08_2015_nsp3_VIPR_ALG4_SNQ27907_1_10190_11029_1_NA_NA_Unknown_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >YN15_nsp3_VIPR_ALG4_946526331_10190_11029_1_2013_10_05_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGTTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Minnesota61_2013_nsp3_VIPR_ALG4_658130729_10155_10994_1_2013_11_18_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Minnesota85_2013_nsp3_VIPR_ALG4_658130540_10155_10994_1_2013_12_04_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >CH_SCZY44_2017_nsp3_VIPR_ALG4_AZL47203_1_10190_11029_1_2017_09_09_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_NorthCarolina91_2013_nsp3_VIPR_ALG4_658130575_10155_10994_1_2013_12_08_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAATTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >OH8593_14_nsp3_VIPR_ALG4_946969666_10163_11002_1_2014_10_14_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTTTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >IBR_3_JPN_2014_nsp3_VIPR_ALG4_948549340_10132_10971_1_2014_04_Japan_Pig_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >IBR_8_JPN_2014_nsp3_VIPR_ALG4_948549354_10132_10971_1_2014_05_Japan_Pig_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTTACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_1873_2_Segovia_nsp3_VIPR_ALG4_QKV43786_1_10194_11033_1_2016_09_23_Spain_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTCTTAATACCTGCTCTGGTTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTCTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >CH_TP_3_1_2018_nsp3_VIPR_ALG4_QCC26586_1_10190_11029_1_2018_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGCTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCCGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Missouri93_2013_nsp3_VIPR_ALG4_658130589_10155_10994_1_2013_12_11_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >IWT_2_JPN_2014_nsp3_VIPR_ALG4_948549326_10132_10971_1_2014_04_Japan_Pig_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >JS2008_nsp3_VIPR_ALG4_459357910_10166_11005_1_2008_China_Swine_PEDV GGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAACTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTTACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTCTTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAATACAACTGTGAGTTCTGTCACCTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTATGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTCGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTAGGTTATTTTACCTGTTGCTTCTATGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAATGGCCTACGTGCACCAACTGGAACACTTGATTCGCTACTGCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_2098_1_Malaga_Casares_nsp3_VIPR_ALG4_QKV43816_1_10194_11033_1_2018_01_11_Spain_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTCTTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Minnesota71_2013_nsp3_VIPR_ALG4_658130736_10155_10994_1_2013_11_25_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_LS_nsp3_VIPR_ALG4_761662564_10190_11029_1_2014_01_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAAAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAAAATTATTTTCTTACACTAAGTTCTTTTGGGTAATTCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCCCACTTTTGATGTTCACACTCAAGCATAAAACATTGTTTTTCCAGGTCTTTCTAATACCTGCTATGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGTTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >KNU_1305_nsp3_VIPR_ALG4_659495322_10190_11029_1_2013_12_South_Korea_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >JSX2014_nsp3_VIPR_ALG4_AZN28592_1_10190_11029_1_2014_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGTTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_AUSTRIA_L01062_M10_15_01_2015_nsp3_VIPR_ALG4_SNT95670_1_10168_11007_1_NA_NA_Unknown_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >COL_Antioquia06285_2015_nsp3_VIPR_ALG4_QGQ60275_1_10182_11021_1_2015_05_20_Colombia_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >CH_SXYL_2016_nsp3_VIPR_ALG4_ASY04642_1_10189_11028_1_2016_09_10_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGTTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >CH_SCZG_2017_nsp3_VIPR_ALG4_AZL47197_1_10190_11029_1_2017_01_05_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Iowa23_57_2013_nsp3_VIPR_ALG4_658130337_10155_10994_1_2013_10_20_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >KGW_1_JPN_2014_nsp3_VIPR_ALG4_948549221_10132_10971_1_2014_04_Japan_Pig_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_GER_L00855_K14_14_02_2014_nsp3_VIPR_ALG4_SNQ28081_1_10185_11024_1_NA_NA_Unknown_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >COL_Antioquia_2014_nsp3_VIPR_ALG4_QGQ60251_1_10173_11012_1_2015_04_27_Colombia_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >Italy_7239_2009_nsp3_VIPR_ALG4_960380158_10161_11000_1_2009_01_14_Italy_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTTTGACTTTCTTTTGGTCAGAATTAGTTTCTTACACCAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTCTTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTATACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATATACATGGCGCTTCTTTACTACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGTTGACTGCGGCATATAACTATTTTTACGCTAGTGATATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATTCTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACATTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >GDS16_nsp3_VIPR_ALG4_QCQ19941_1_10190_11029_1_2011_05_25_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAAACATTGTTTTTCCAGGTCTTCTTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTAGAAGTCTACAATTATTTGGCAGGGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATATTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTCTTTAATACACCTGTGAGTTTTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTCTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTGGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Minnesota100_2013_nsp3_VIPR_ALG4_658130631_10155_10994_1_2013_12_14_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >KNU_1601_nsp3_VIPR_ALG4_ASA69723_1_10190_11029_1_2016_03_South_Korea_Swine_PEDV AGTGGTTATGTTTCACGTGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTATTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACTATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTTTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_GER_L00901_V215_1978_nsp3_VIPR_ALG4_SNC44844_1_10183_11022_1_NA_NA_Unknown_PEDV GGTGGCTATGTGTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTCTGGGTAAATCCTGGTTATGTTACACCTATGTTTGCGTGCTTGTCATTGCTATCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTCTTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTTATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTCTTTAATACACCTGCGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCCTATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGTTGCTGTGTATATGGCCTTGAGATTTCCTACGTTCGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAATGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTGTTGTCCGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >COL_Cundinamarca_2014_nsp3_VIPR_ALG4_984943312_10168_11007_1_2014_05_02_Colombia_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >CHN_SH_2016_4_2016_nsp3_VIPR_ALG4_AVK78146_1_9898_10737_1_2016_01_20_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTTTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >HUN_5031_2016_nsp3_VIPR_ALG4_ASB30080_1_10178_11017_1_2016_03_01_Hungary_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCCACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Minnesota408_2014_nsp3_VIPR_ALG4_825144930_10142_10981_1_2014_08_28_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTCTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGATGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATTGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >KNU_1807_nsp3_VIPR_ALG4_QBA57557_1_10169_11008_1_2018_03_South_Korea_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTTTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACTACCTTACACGGCACATACACATGGCGTTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGATTGCGGCATATAACTATTTTTACGCTAGTGACGTTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_GER_L00927_K20_14_02_2014_nsp3_VIPR_ALG4_SNQ27984_1_10190_11029_1_NA_NA_Unknown_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >COL_ValledelCauca_2015_nsp3_VIPR_ALG4_QGQ60293_1_10168_11007_1_2017_07_01_Colombia_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Illinois259_2014_nsp3_VIPR_ALG4_825144552_10145_10984_1_2014_03_13_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >KNU_1710_nsp3_VIPR_ALG4_AWM11497_1_10190_11029_1_2017_04_South_Korea_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGTTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTCACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCAAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Minnesota86_2013_nsp3_VIPR_ALG4_658130547_10155_10994_1_2013_12_07_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >KUIDL_PED_2014_007_nsp3_VIPR_ALG4_614790571_9969_10808_1_2014_02_South_Korea_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_GER_L00999_K06_15_07_2015_nsp3_VIPR_ALG4_SNQ27940_1_10166_11005_1_NA_NA_Unknown_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >FKO_1_JPN_2014_nsp3_VIPR_ALG4_948549130_10132_10971_1_2014_03_Japan_Pig_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_SouthDakota285_2014_nsp3_VIPR_ALG4_825144566_10145_10984_1_2014_04_02_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PC22A_P20_nsp3_VIPR_ALG4_APX55516_1_10181_11020_1_2013_10_01_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTCTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGATGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATTGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_OK10240_8_2017_nsp3_VIPR_ALG4_AVI57402_1_10190_11029_1_2017_02_07_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGATTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >MN_nsp3_VIPR_ALG4_551485549_10190_11029_1_2013_06_19_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_GER_L01015_K01_15_05_2015_nsp3_VIPR_ALG4_SNQ28056_1_10190_11029_1_NA_NA_Unknown_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >GDS01_nsp3_VIPR_ALG4_815939790_10190_11029_1_2012_11_10_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGTTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAAACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTCTTTAACACACCTGTGAGTTTTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTGGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >GDS52_nsp3_VIPR_ALG4_QCQ20067_1_10190_11029_1_2017_02_25_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGTTGTCCTCACTTTTGATGTTCACACTCAAGCATAAAACGTTGTTTTTCCAGGTCTTCTTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTAGAAGTCTATAACTATTTGGCAGGGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAATATCTTTGTATGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTCTTTAATACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGTTGACTGCGGCATATAACTATTTCTACGCTAGTGACACTCTTAGTTGTGCTATGACACTATTCGCTAGTGTGACTGGCAACTGGTTTGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGGTTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTTTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTACTATGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCTTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATCTCTTCCGTTCAG >USA_Oklahoma477_2014_nsp3_VIPR_ALG4_825144888_10145_10984_1_2014_12_12_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACGGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Texas128_2013_nsp3_VIPR_ALG4_658130673_10155_10994_1_2013_11_12_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >OH10123_14_nsp3_VIPR_ALG4_946969657_10190_11029_1_2014_04_22_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_GER_L01061_K07_15_03_2015_nsp3_VIPR_ALG4_SNT95658_1_10190_11029_1_NA_NA_Unknown_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >GDS08_nsp3_VIPR_ALG4_QCQ19935_1_10190_11029_1_2011_02_10_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGTTGTCCTCACTTTTGATGTTCACACTCAAGCATAAAACGTTGTTTTTCCAGGTCTTCTTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTAGAAGTCTACAATTATTTGGCAGGGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATATTTGTCTGCTTTGTTGTTACCATCTTACACGGCACATACACATGGCGCTTCTTTAATACACCTGTGAGTTTTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTCTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTGGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >CH_HNZZ47_2016_nsp3_VIPR_ALG4_1111331903_10181_11020_1_2016_05_China_Swine_PEDV AGTGGTTATGTTACACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGTTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTATGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAGTTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >CHN_SH_2012_5_2012_nsp3_VIPR_ALG4_AVK78140_1_10190_11029_1_2012_02_21_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAATTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_1453_Zaragoza_Tauste_nsp3_VIPR_ALG4_QKV43720_1_10155_10994_1_2014_04_24_Spain_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Minnesota402_2014_nsp3_VIPR_ALG4_825144454_10145_10984_1_2014_08_18_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_LNsy_nsp3_VIPR_ALG4_ATG31099_1_10190_11029_1_2015_03_02_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >CH_BJ11_2016_nsp3_VIPR_ALG4_AYP73644_1_10190_11029_1_2016_11_China_Unknown_PEDV AGTGGTTATGTTTTACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAAGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTTTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAGTTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >Br1_87_nsp3_VIPR_ALG4_SNW64183_1_10190_11029_1_NA_NA_Unknown_PEDV GGTGGCTATGTGTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTCTGGGTAAATCCTGGTTATGTTACACCTATGTTTGCGTGCTTGTCATTGCTATCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTCTTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTTATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTCTTTAATACACCTGCGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCCTATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGTTGCTGTGTATATGGCCTTGAGATTTCCTACGTTCGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAATGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTGTTGTCCGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >GDS33_nsp3_VIPR_ALG4_QCQ19899_1_10190_11029_1_2014_07_28_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTTTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTTTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_USA_Texas132_2015_nsp3_VIPR_ALG4_1034700865_10161_11000_1_2015_11_05_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_GER_L00857_K14_14_04_2014_nsp3_VIPR_ALG4_SNQ28009_1_10171_11010_1_NA_NA_Unknown_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV GGTGGCTATGTGTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTCTGGGTAAATCCTGGTTATGTTACACCTATGTTTGCGTGTTTGTCATTGCTATCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTCTTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTTATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTCTTTAATACACCTGCGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCCTATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGTTGCTGTGTATATGGCCTTGAGATTTCCTACGTTCGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAATGGCCTACCTGCACCAACTGGAACACTTGATTCACTACTGTTGTCCGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_MEX_GTO_02_2016_nsp3_VIPR_ALG4_AVU05338_1_9996_10835_1_2016_07_19_Mexico_Swine_PEDV AGTGGTTGTGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAGTCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTTATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >GDS22_nsp3_VIPR_ALG4_QCQ19833_1_10190_11029_1_2012_09_23_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >OKY_1_JPN_2014_nsp3_VIPR_ALG4_948549382_10132_10971_1_2014_03_Japan_Pig_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Illinois260_2014_nsp3_VIPR_ALG4_825144671_10145_10984_1_2014_03_14_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_H3_Barcelona_Vic_nsp3_VIPR_ALG4_QKV43846_1_10194_11033_1_2019_01_07_Spain_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTCTTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGTTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Missouri164_2014_nsp3_VIPR_ALG4_825144804_10145_10984_1_2014_02_26_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTGGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_MEX_JAL_03_2017_nsp3_VIPR_ALG4_AVU05380_1_10020_10859_1_2017_02_10_Mexico_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATATTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCGAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >GDS28_nsp3_VIPR_ALG4_QCQ19857_1_10190_11029_1_2012_12_13_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGCAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCTTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTATGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >TC_Iowa106_PV39_P1_nsp3_VIPR_ALG4_684183346_10178_11017_1_2013_12_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Minnesota379_2014_nsp3_VIPR_ALG4_825144881_10145_10984_1_2014_06_10_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_MEX_VER_02_2015_nsp3_VIPR_ALG4_AVU05485_1_10020_10859_1_2015_10_21_Mexico_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGCGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_NorthCarolina40_2013_nsp3_VIPR_ALG4_658130316_10155_10994_1_2013_10_05_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTCGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >PEDV_MEX_MICH_02_2015_nsp3_VIPR_ALG4_AVU05443_1_10020_10859_1_2015_03_20_Mexico_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >CH_TP_4_3_2018_nsp3_VIPR_ALG4_QCC26593_1_10192_11031_1_2018_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGCTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCCGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_NC_2013_49469_nsp3_VIPR_ALG4_874010829_10190_11029_1_2013_12_10_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAATTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >USA_Oklahoma38_2013_nsp3_VIPR_ALG4_658130302_10155_10994_1_2013_09_07_USA_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCAGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACATGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTTTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG >SHXX1902_nsp3_VIPR_ALG4_QOC68599_1_10191_11030_1_2019_02_China_Swine_PEDV AGTGGTTATGTTTCACGCGCCTGTAGAAATGTCTTGCTGGTTGGTTCTTTTCTGACTTTCTTTTGGTCTGAATTAGTTTCCTACACTAAGTTCTTTTGGGTAAATCCTGGTTATGTCACACCTATGTTTGCGTGTTTGTCATTGCTGTCCTCACTTTTGATGTTCACACTCAAGCATAAGACATTGTTTTTCCAGGTCTTTCTAATACCTGCTCTGATTGTTACATCTTGCATTAATTTGGCATTTGATGTTGAAGTCTACAACTATTTGGCAGAGCATTTTGATTACCATGTTTCTCTCATGGGTTTTAATGCACAAGGTCTTGTTAACATCTTTGTCTGCTTTGTTGTTACCATTTTACACGGCACATACACAAGGCGCTTTTTTAACACACCTGTGAGTTCTGTCACTTATGTGGTAGCTTTGCTGACTGCGGCATATAACTATTTTTACGCTAGTGACATTCTTAGTTGTGCTATGACACTATTTGCTAGTGTGACTGGCAACTGGTTCGTTGGTGCTGTTTGTTATAAAGCTGCTGTTTATATGGCCTTGAGATTTCCTACTTTTGTGGCTATTTTTGGTGATATTAAGAGTGTTATGTTCTGTTACCTTGTGTTGGGTTATTTTACCTGTTGCTTCTACGGTATTCTCTACTGGTTCAACAGGTTCTTTAAGGTTAGTGTAGGTGTCTATGACTATACTGTTAGTGCTGCTGAGTTTAAGTATATGGTTGCTAACGGCCTACGTGCACCAACTGGAACACTTGATTCACTACTTCTGTCTGCCAAATTGATTGGTATTGGTGGTGAGCGGAATATTAAGATTTCTTCCGTTCAG
>AH2012_12_nsp3_VIPR_ALG4_1020263108_10190_11029_1_2012_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAGHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_OK10240_6_2017_nsp3_VIPR_ALG4_AVI57395_1_10190_11029_1_2017_02_07_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Minnesota289_2014_nsp3_VIPR_ALG4_825144643_10145_10984_1_2014_04_02_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Minnesota79_2013_nsp3_VIPR_ALG4_658130512_10155_10994_1_2013_11_30_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >CH_SCGA_2017_nsp3_VIPR_ALG4_AZL47191_1_10190_11029_1_2017_01_05_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_GER_L01018_K01_15_08_2015_nsp3_VIPR_ALG4_SNQ27907_1_10190_11029_1_NA_NA_Unknown_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >YN15_nsp3_VIPR_ALG4_946526331_10190_11029_1_2013_10_05_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Minnesota61_2013_nsp3_VIPR_ALG4_658130729_10155_10994_1_2013_11_18_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Minnesota85_2013_nsp3_VIPR_ALG4_658130540_10155_10994_1_2013_12_04_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >CH_SCZY44_2017_nsp3_VIPR_ALG4_AZL47203_1_10190_11029_1_2017_09_09_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_NorthCarolina91_2013_nsp3_VIPR_ALG4_658130575_10155_10994_1_2013_12_08_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >OH8593_14_nsp3_VIPR_ALG4_946969666_10163_11002_1_2014_10_14_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >IBR_3_JPN_2014_nsp3_VIPR_ALG4_948549340_10132_10971_1_2014_04_Japan_Pig_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >IBR_8_JPN_2014_nsp3_VIPR_ALG4_948549354_10132_10971_1_2014_05_Japan_Pig_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_1873_2_Segovia_nsp3_VIPR_ALG4_QKV43786_1_10194_11033_1_2016_09_23_Spain_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALVVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFSNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >CH_TP_3_1_2018_nsp3_VIPR_ALG4_QCC26586_1_10190_11029_1_2018_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Missouri93_2013_nsp3_VIPR_ALG4_658130589_10155_10994_1_2013_12_11_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >IWT_2_JPN_2014_nsp3_VIPR_ALG4_948549326_10132_10971_1_2014_04_Japan_Pig_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >JS2008_nsp3_VIPR_ALG4_459357910_10166_11005_1_2008_China_Swine_PEDV GGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTTVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_2098_1_Malaga_Casares_nsp3_VIPR_ALG4_QKV43816_1_10194_11033_1_2018_01_11_Spain_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Minnesota71_2013_nsp3_VIPR_ALG4_658130736_10155_10994_1_2013_11_25_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_LS_nsp3_VIPR_ALG4_761662564_10190_11029_1_2014_01_China_Swine_PEDV SGYVSRACKNVLLVGSFLTFFWSKLFSYTKFFWVIPGYVTPMFACLSLLS PLLMFTLKHKTLFFQVFLIPAMIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >KNU_1305_nsp3_VIPR_ALG4_659495322_10190_11029_1_2013_12_South_Korea_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >JSX2014_nsp3_VIPR_ALG4_AZN28592_1_10190_11029_1_2014_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGVVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_AUSTRIA_L01062_M10_15_01_2015_nsp3_VIPR_ALG4_SNT95670_1_10168_11007_1_NA_NA_Unknown_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >COL_Antioquia06285_2015_nsp3_VIPR_ALG4_QGQ60275_1_10182_11021_1_2015_05_20_Colombia_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >CH_SXYL_2016_nsp3_VIPR_ALG4_ASY04642_1_10189_11028_1_2016_09_10_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWLNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >CH_SCZG_2017_nsp3_VIPR_ALG4_AZL47197_1_10190_11029_1_2017_01_05_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Iowa23_57_2013_nsp3_VIPR_ALG4_658130337_10155_10994_1_2013_10_20_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >KGW_1_JPN_2014_nsp3_VIPR_ALG4_948549221_10132_10971_1_2014_04_Japan_Pig_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_GER_L00855_K14_14_02_2014_nsp3_VIPR_ALG4_SNQ28081_1_10185_11024_1_NA_NA_Unknown_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >COL_Antioquia_2014_nsp3_VIPR_ALG4_QGQ60251_1_10173_11012_1_2015_04_27_Colombia_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >Italy_7239_2009_nsp3_VIPR_ALG4_960380158_10161_11000_1_2009_01_14_Italy_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFTTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYSVSAAEFKYMVANGLR APTGTFDSLLLSAKLIGIGGERNIKISSVQ >GDS16_nsp3_VIPR_ALG4_QCQ19941_1_10190_11029_1_2011_05_25_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAGHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Minnesota100_2013_nsp3_VIPR_ALG4_658130631_10155_10994_1_2013_12_14_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >KNU_1601_nsp3_VIPR_ALG4_ASA69723_1_10190_11029_1_2016_03_South_Korea_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_GER_L00901_V215_1978_nsp3_VIPR_ALG4_SNC44844_1_10183_11022_1_NA_NA_Unknown_PEDV GGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPASSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKVAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >COL_Cundinamarca_2014_nsp3_VIPR_ALG4_984943312_10168_11007_1_2014_05_02_Colombia_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >CHN_SH_2016_4_2016_nsp3_VIPR_ALG4_AVK78146_1_9898_10737_1_2016_01_20_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >HUN_5031_2016_nsp3_VIPR_ALG4_ASB30080_1_10178_11017_1_2016_03_01_Hungary_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVHNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Minnesota408_2014_nsp3_VIPR_ALG4_825144930_10142_10981_1_2014_08_28_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALMTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYIALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >KNU_1807_nsp3_VIPR_ALG4_QBA57557_1_10169_11008_1_2018_03_South_Korea_Swine_PEDV SGYVSRACRNVLLVGFFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTTLHGTYTWRFFNTPVSSVTYVVALLIAAYNYF YASDVLSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_GER_L00927_K20_14_02_2014_nsp3_VIPR_ALG4_SNQ27984_1_10190_11029_1_NA_NA_Unknown_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >COL_ValledelCauca_2015_nsp3_VIPR_ALG4_QGQ60293_1_10168_11007_1_2017_07_01_Colombia_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Illinois259_2014_nsp3_VIPR_ALG4_825144552_10145_10984_1_2014_03_13_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >KNU_1710_nsp3_VIPR_ALG4_AWM11497_1_10190_11029_1_2017_04_South_Korea_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Minnesota86_2013_nsp3_VIPR_ALG4_658130547_10155_10994_1_2013_12_07_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >KUIDL_PED_2014_007_nsp3_VIPR_ALG4_614790571_9969_10808_1_2014_02_South_Korea_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_GER_L00999_K06_15_07_2015_nsp3_VIPR_ALG4_SNQ27940_1_10166_11005_1_NA_NA_Unknown_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >FKO_1_JPN_2014_nsp3_VIPR_ALG4_948549130_10132_10971_1_2014_03_Japan_Pig_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_SouthDakota285_2014_nsp3_VIPR_ALG4_825144566_10145_10984_1_2014_04_02_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PC22A_P20_nsp3_VIPR_ALG4_APX55516_1_10181_11020_1_2013_10_01_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALMTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYIALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_OK10240_8_2017_nsp3_VIPR_ALG4_AVI57402_1_10190_11029_1_2017_02_07_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >MN_nsp3_VIPR_ALG4_551485549_10190_11029_1_2013_06_19_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_GER_L01015_K01_15_05_2015_nsp3_VIPR_ALG4_SNQ28056_1_10190_11029_1_NA_NA_Unknown_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >GDS01_nsp3_VIPR_ALG4_815939790_10190_11029_1_2012_11_10_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >GDS52_nsp3_VIPR_ALG4_QCQ20067_1_10190_11029_1_2017_02_25_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAGHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDTLSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCYYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Oklahoma477_2014_nsp3_VIPR_ALG4_825144888_10145_10984_1_2014_12_12_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Texas128_2013_nsp3_VIPR_ALG4_658130673_10155_10994_1_2013_11_12_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >OH10123_14_nsp3_VIPR_ALG4_946969657_10190_11029_1_2014_04_22_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_GER_L01061_K07_15_03_2015_nsp3_VIPR_ALG4_SNT95658_1_10190_11029_1_NA_NA_Unknown_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >GDS08_nsp3_VIPR_ALG4_QCQ19935_1_10190_11029_1_2011_02_10_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAGHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >CH_HNZZ47_2016_nsp3_VIPR_ALG4_1111331903_10181_11020_1_2016_05_China_Swine_PEDV SGYVTRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >CHN_SH_2012_5_2012_nsp3_VIPR_ALG4_AVK78140_1_10190_11029_1_2012_02_21_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_1453_Zaragoza_Tauste_nsp3_VIPR_ALG4_QKV43720_1_10155_10994_1_2014_04_24_Spain_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Minnesota402_2014_nsp3_VIPR_ALG4_825144454_10145_10984_1_2014_08_18_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_LNsy_nsp3_VIPR_ALG4_ATG31099_1_10190_11029_1_2015_03_02_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >CH_BJ11_2016_nsp3_VIPR_ALG4_AYP73644_1_10190_11029_1_2016_11_China_Unknown_PEDV SGYVLRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >Br1_87_nsp3_VIPR_ALG4_SNW64183_1_10190_11029_1_NA_NA_Unknown_PEDV GGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPASSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKVAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >GDS33_nsp3_VIPR_ALG4_QCQ19899_1_10190_11029_1_2014_07_28_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSFVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_USA_Texas132_2015_nsp3_VIPR_ALG4_1034700865_10161_11000_1_2015_11_05_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_GER_L00857_K14_14_04_2014_nsp3_VIPR_ALG4_SNQ28009_1_10171_11010_1_NA_NA_Unknown_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV GGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPASSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKVAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLP APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_MEX_GTO_02_2016_nsp3_VIPR_ALG4_AVU05338_1_9996_10835_1_2016_07_19_Mexico_Swine_PEDV SGCVSRACRNVLLVGSFLTFFWSELVSYTKFFWVSPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >GDS22_nsp3_VIPR_ALG4_QCQ19833_1_10190_11029_1_2012_09_23_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >OKY_1_JPN_2014_nsp3_VIPR_ALG4_948549382_10132_10971_1_2014_03_Japan_Pig_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Illinois260_2014_nsp3_VIPR_ALG4_825144671_10145_10984_1_2014_03_14_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_H3_Barcelona_Vic_nsp3_VIPR_ALG4_QKV43846_1_10194_11033_1_2019_01_07_Spain_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Missouri164_2014_nsp3_VIPR_ALG4_825144804_10145_10984_1_2014_02_26_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YAGDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_MEX_JAL_03_2017_nsp3_VIPR_ALG4_AVU05380_1_10020_10859_1_2017_02_10_Mexico_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPIFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >GDS28_nsp3_VIPR_ALG4_QCQ19857_1_10190_11029_1_2012_12_13_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >TC_Iowa106_PV39_P1_nsp3_VIPR_ALG4_684183346_10178_11017_1_2013_12_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Minnesota379_2014_nsp3_VIPR_ALG4_825144881_10145_10984_1_2014_06_10_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_MEX_VER_02_2015_nsp3_VIPR_ALG4_AVU05485_1_10020_10859_1_2015_10_21_Mexico_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_NorthCarolina40_2013_nsp3_VIPR_ALG4_658130316_10155_10994_1_2013_10_05_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >PEDV_MEX_MICH_02_2015_nsp3_VIPR_ALG4_AVU05443_1_10020_10859_1_2015_03_20_Mexico_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >CH_TP_4_3_2018_nsp3_VIPR_ALG4_QCC26593_1_10192_11031_1_2018_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_NC_2013_49469_nsp3_VIPR_ALG4_874010829_10190_11029_1_2013_12_10_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >USA_Oklahoma38_2013_nsp3_VIPR_ALG4_658130302_10155_10994_1_2013_09_07_USA_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTWRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ >SHXX1902_nsp3_VIPR_ALG4_QOC68599_1_10191_11030_1_2019_02_China_Swine_PEDV SGYVSRACRNVLLVGSFLTFFWSELVSYTKFFWVNPGYVTPMFACLSLLS SLLMFTLKHKTLFFQVFLIPALIVTSCINLAFDVEVYNYLAEHFDYHVSL MGFNAQGLVNIFVCFVVTILHGTYTRRFFNTPVSSVTYVVALLTAAYNYF YASDILSCAMTLFASVTGNWFVGAVCYKAAVYMALRFPTFVAIFGDIKSV MFCYLVLGYFTCCFYGILYWFNRFFKVSVGVYDYTVSAAEFKYMVANGLR APTGTLDSLLLSAKLIGIGGERNIKISSVQ
Reading sequence file /data//pss_subsets/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/fasta/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1
Found 90 sequences of length 840
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 0.7%
Found 47 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 4
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 72 polymorphic sites
**p-Value(s)**
----------
NSS: 8.00e-03 (1000 permutations)
Max Chi^2: 5.40e-02 (1000 permutations)
PHI (Permutation): 6.85e-01 (1000 permutations)
PHI (Normal): 6.24e-01
#NEXUS
[ID: 1971224789]
begin taxa;
dimensions ntax=90;
taxlabels
AH2012_12_nsp3_VIPR_ALG4_1020263108_10190_11029_1_2012_China_Swine_PEDV
CH_SCZY44_2017_nsp3_VIPR_ALG4_AZL47203_1_10190_11029_1_2017_09_09_China_Swine_PEDV
USA_NorthCarolina91_2013_nsp3_VIPR_ALG4_658130575_10155_10994_1_2013_12_08_USA_Swine_PEDV
OH8593_14_nsp3_VIPR_ALG4_946969666_10163_11002_1_2014_10_14_USA_Swine_PEDV
IBR_3_JPN_2014_nsp3_VIPR_ALG4_948549340_10132_10971_1_2014_04_Japan_Pig_PEDV
IBR_8_JPN_2014_nsp3_VIPR_ALG4_948549354_10132_10971_1_2014_05_Japan_Pig_PEDV
PEDV_1873_2_Segovia_nsp3_VIPR_ALG4_QKV43786_1_10194_11033_1_2016_09_23_Spain_Swine_PEDV
CH_TP_3_1_2018_nsp3_VIPR_ALG4_QCC26586_1_10190_11029_1_2018_China_Swine_PEDV
USA_Missouri93_2013_nsp3_VIPR_ALG4_658130589_10155_10994_1_2013_12_11_USA_Swine_PEDV
IWT_2_JPN_2014_nsp3_VIPR_ALG4_948549326_10132_10971_1_2014_04_Japan_Pig_PEDV
JS2008_nsp3_VIPR_ALG4_459357910_10166_11005_1_2008_China_Swine_PEDV
USA_OK10240_6_2017_nsp3_VIPR_ALG4_AVI57395_1_10190_11029_1_2017_02_07_USA_Swine_PEDV
PEDV_2098_1_Malaga_Casares_nsp3_VIPR_ALG4_QKV43816_1_10194_11033_1_2018_01_11_Spain_Swine_PEDV
USA_Minnesota71_2013_nsp3_VIPR_ALG4_658130736_10155_10994_1_2013_11_25_USA_Swine_PEDV
PEDV_LS_nsp3_VIPR_ALG4_761662564_10190_11029_1_2014_01_China_Swine_PEDV
KNU_1305_nsp3_VIPR_ALG4_659495322_10190_11029_1_2013_12_South_Korea_Swine_PEDV
JSX2014_nsp3_VIPR_ALG4_AZN28592_1_10190_11029_1_2014_China_Swine_PEDV
PEDV_AUSTRIA_L01062_M10_15_01_2015_nsp3_VIPR_ALG4_SNT95670_1_10168_11007_1_NA_NA_Unknown_PEDV
COL_Antioquia06285_2015_nsp3_VIPR_ALG4_QGQ60275_1_10182_11021_1_2015_05_20_Colombia_Swine_PEDV
CH_SXYL_2016_nsp3_VIPR_ALG4_ASY04642_1_10189_11028_1_2016_09_10_China_Swine_PEDV
CH_SCZG_2017_nsp3_VIPR_ALG4_AZL47197_1_10190_11029_1_2017_01_05_China_Swine_PEDV
USA_Iowa23_57_2013_nsp3_VIPR_ALG4_658130337_10155_10994_1_2013_10_20_USA_Swine_PEDV
USA_Minnesota289_2014_nsp3_VIPR_ALG4_825144643_10145_10984_1_2014_04_02_USA_Swine_PEDV
KGW_1_JPN_2014_nsp3_VIPR_ALG4_948549221_10132_10971_1_2014_04_Japan_Pig_PEDV
PEDV_GER_L00855_K14_14_02_2014_nsp3_VIPR_ALG4_SNQ28081_1_10185_11024_1_NA_NA_Unknown_PEDV
COL_Antioquia_2014_nsp3_VIPR_ALG4_QGQ60251_1_10173_11012_1_2015_04_27_Colombia_Swine_PEDV
Italy_7239_2009_nsp3_VIPR_ALG4_960380158_10161_11000_1_2009_01_14_Italy_Swine_PEDV
GDS16_nsp3_VIPR_ALG4_QCQ19941_1_10190_11029_1_2011_05_25_China_Swine_PEDV
USA_Minnesota100_2013_nsp3_VIPR_ALG4_658130631_10155_10994_1_2013_12_14_USA_Swine_PEDV
KNU_1601_nsp3_VIPR_ALG4_ASA69723_1_10190_11029_1_2016_03_South_Korea_Swine_PEDV
PEDV_GER_L00901_V215_1978_nsp3_VIPR_ALG4_SNC44844_1_10183_11022_1_NA_NA_Unknown_PEDV
COL_Cundinamarca_2014_nsp3_VIPR_ALG4_984943312_10168_11007_1_2014_05_02_Colombia_Swine_PEDV
CHN_SH_2016_4_2016_nsp3_VIPR_ALG4_AVK78146_1_9898_10737_1_2016_01_20_China_Swine_PEDV
USA_Minnesota79_2013_nsp3_VIPR_ALG4_658130512_10155_10994_1_2013_11_30_USA_Swine_PEDV
HUN_5031_2016_nsp3_VIPR_ALG4_ASB30080_1_10178_11017_1_2016_03_01_Hungary_Swine_PEDV
USA_Minnesota408_2014_nsp3_VIPR_ALG4_825144930_10142_10981_1_2014_08_28_USA_Swine_PEDV
KNU_1807_nsp3_VIPR_ALG4_QBA57557_1_10169_11008_1_2018_03_South_Korea_Swine_PEDV
PEDV_GER_L00927_K20_14_02_2014_nsp3_VIPR_ALG4_SNQ27984_1_10190_11029_1_NA_NA_Unknown_PEDV
COL_ValledelCauca_2015_nsp3_VIPR_ALG4_QGQ60293_1_10168_11007_1_2017_07_01_Colombia_Swine_PEDV
USA_Illinois259_2014_nsp3_VIPR_ALG4_825144552_10145_10984_1_2014_03_13_USA_Swine_PEDV
KNU_1710_nsp3_VIPR_ALG4_AWM11497_1_10190_11029_1_2017_04_South_Korea_Swine_PEDV
USA_Minnesota86_2013_nsp3_VIPR_ALG4_658130547_10155_10994_1_2013_12_07_USA_Swine_PEDV
KUIDL_PED_2014_007_nsp3_VIPR_ALG4_614790571_9969_10808_1_2014_02_South_Korea_Swine_PEDV
PEDV_GER_L00999_K06_15_07_2015_nsp3_VIPR_ALG4_SNQ27940_1_10166_11005_1_NA_NA_Unknown_PEDV
CH_SCGA_2017_nsp3_VIPR_ALG4_AZL47191_1_10190_11029_1_2017_01_05_China_Swine_PEDV
FKO_1_JPN_2014_nsp3_VIPR_ALG4_948549130_10132_10971_1_2014_03_Japan_Pig_PEDV
USA_SouthDakota285_2014_nsp3_VIPR_ALG4_825144566_10145_10984_1_2014_04_02_USA_Swine_PEDV
PC22A_P20_nsp3_VIPR_ALG4_APX55516_1_10181_11020_1_2013_10_01_USA_Swine_PEDV
USA_OK10240_8_2017_nsp3_VIPR_ALG4_AVI57402_1_10190_11029_1_2017_02_07_USA_Swine_PEDV
MN_nsp3_VIPR_ALG4_551485549_10190_11029_1_2013_06_19_USA_Swine_PEDV
PEDV_GER_L01015_K01_15_05_2015_nsp3_VIPR_ALG4_SNQ28056_1_10190_11029_1_NA_NA_Unknown_PEDV
GDS01_nsp3_VIPR_ALG4_815939790_10190_11029_1_2012_11_10_China_Swine_PEDV
GDS52_nsp3_VIPR_ALG4_QCQ20067_1_10190_11029_1_2017_02_25_China_Swine_PEDV
USA_Oklahoma477_2014_nsp3_VIPR_ALG4_825144888_10145_10984_1_2014_12_12_USA_Swine_PEDV
USA_Texas128_2013_nsp3_VIPR_ALG4_658130673_10155_10994_1_2013_11_12_USA_Swine_PEDV
PEDV_GER_L01018_K01_15_08_2015_nsp3_VIPR_ALG4_SNQ27907_1_10190_11029_1_NA_NA_Unknown_PEDV
OH10123_14_nsp3_VIPR_ALG4_946969657_10190_11029_1_2014_04_22_USA_Swine_PEDV
PEDV_GER_L01061_K07_15_03_2015_nsp3_VIPR_ALG4_SNT95658_1_10190_11029_1_NA_NA_Unknown_PEDV
GDS08_nsp3_VIPR_ALG4_QCQ19935_1_10190_11029_1_2011_02_10_China_Swine_PEDV
CH_HNZZ47_2016_nsp3_VIPR_ALG4_1111331903_10181_11020_1_2016_05_China_Swine_PEDV
CHN_SH_2012_5_2012_nsp3_VIPR_ALG4_AVK78140_1_10190_11029_1_2012_02_21_China_Swine_PEDV
PEDV_1453_Zaragoza_Tauste_nsp3_VIPR_ALG4_QKV43720_1_10155_10994_1_2014_04_24_Spain_Swine_PEDV
USA_Minnesota402_2014_nsp3_VIPR_ALG4_825144454_10145_10984_1_2014_08_18_USA_Swine_PEDV
PEDV_LNsy_nsp3_VIPR_ALG4_ATG31099_1_10190_11029_1_2015_03_02_China_Swine_PEDV
CH_BJ11_2016_nsp3_VIPR_ALG4_AYP73644_1_10190_11029_1_2016_11_China_Unknown_PEDV
Br1_87_nsp3_VIPR_ALG4_SNW64183_1_10190_11029_1_NA_NA_Unknown_PEDV
YN15_nsp3_VIPR_ALG4_946526331_10190_11029_1_2013_10_05_China_Swine_PEDV
GDS33_nsp3_VIPR_ALG4_QCQ19899_1_10190_11029_1_2014_07_28_China_Swine_PEDV
PEDV_USA_Texas132_2015_nsp3_VIPR_ALG4_1034700865_10161_11000_1_2015_11_05_USA_Swine_PEDV
PEDV_GER_L00857_K14_14_04_2014_nsp3_VIPR_ALG4_SNQ28009_1_10171_11010_1_NA_NA_Unknown_PEDV
85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV
PEDV_MEX_GTO_02_2016_nsp3_VIPR_ALG4_AVU05338_1_9996_10835_1_2016_07_19_Mexico_Swine_PEDV
GDS22_nsp3_VIPR_ALG4_QCQ19833_1_10190_11029_1_2012_09_23_China_Swine_PEDV
OKY_1_JPN_2014_nsp3_VIPR_ALG4_948549382_10132_10971_1_2014_03_Japan_Pig_PEDV
USA_Illinois260_2014_nsp3_VIPR_ALG4_825144671_10145_10984_1_2014_03_14_USA_Swine_PEDV
PEDV_H3_Barcelona_Vic_nsp3_VIPR_ALG4_QKV43846_1_10194_11033_1_2019_01_07_Spain_Swine_PEDV
USA_Missouri164_2014_nsp3_VIPR_ALG4_825144804_10145_10984_1_2014_02_26_USA_Swine_PEDV
USA_Minnesota61_2013_nsp3_VIPR_ALG4_658130729_10155_10994_1_2013_11_18_USA_Swine_PEDV
PEDV_MEX_JAL_03_2017_nsp3_VIPR_ALG4_AVU05380_1_10020_10859_1_2017_02_10_Mexico_Swine_PEDV
GDS28_nsp3_VIPR_ALG4_QCQ19857_1_10190_11029_1_2012_12_13_China_Swine_PEDV
TC_Iowa106_PV39_P1_nsp3_VIPR_ALG4_684183346_10178_11017_1_2013_12_USA_Swine_PEDV
USA_Minnesota379_2014_nsp3_VIPR_ALG4_825144881_10145_10984_1_2014_06_10_USA_Swine_PEDV
PEDV_MEX_VER_02_2015_nsp3_VIPR_ALG4_AVU05485_1_10020_10859_1_2015_10_21_Mexico_Swine_PEDV
USA_NorthCarolina40_2013_nsp3_VIPR_ALG4_658130316_10155_10994_1_2013_10_05_USA_Swine_PEDV
PEDV_MEX_MICH_02_2015_nsp3_VIPR_ALG4_AVU05443_1_10020_10859_1_2015_03_20_Mexico_Swine_PEDV
CH_TP_4_3_2018_nsp3_VIPR_ALG4_QCC26593_1_10192_11031_1_2018_China_Swine_PEDV
USA_NC_2013_49469_nsp3_VIPR_ALG4_874010829_10190_11029_1_2013_12_10_USA_Swine_PEDV
USA_Oklahoma38_2013_nsp3_VIPR_ALG4_658130302_10155_10994_1_2013_09_07_USA_Swine_PEDV
USA_Minnesota85_2013_nsp3_VIPR_ALG4_658130540_10155_10994_1_2013_12_04_USA_Swine_PEDV
SHXX1902_nsp3_VIPR_ALG4_QOC68599_1_10191_11030_1_2019_02_China_Swine_PEDV
;
end;
begin trees;
translate
1 AH2012_12_nsp3_VIPR_ALG4_1020263108_10190_11029_1_2012_China_Swine_PEDV,
2 CH_SCZY44_2017_nsp3_VIPR_ALG4_AZL47203_1_10190_11029_1_2017_09_09_China_Swine_PEDV,
3 USA_NorthCarolina91_2013_nsp3_VIPR_ALG4_658130575_10155_10994_1_2013_12_08_USA_Swine_PEDV,
4 OH8593_14_nsp3_VIPR_ALG4_946969666_10163_11002_1_2014_10_14_USA_Swine_PEDV,
5 IBR_3_JPN_2014_nsp3_VIPR_ALG4_948549340_10132_10971_1_2014_04_Japan_Pig_PEDV,
6 IBR_8_JPN_2014_nsp3_VIPR_ALG4_948549354_10132_10971_1_2014_05_Japan_Pig_PEDV,
7 PEDV_1873_2_Segovia_nsp3_VIPR_ALG4_QKV43786_1_10194_11033_1_2016_09_23_Spain_Swine_PEDV,
8 CH_TP_3_1_2018_nsp3_VIPR_ALG4_QCC26586_1_10190_11029_1_2018_China_Swine_PEDV,
9 USA_Missouri93_2013_nsp3_VIPR_ALG4_658130589_10155_10994_1_2013_12_11_USA_Swine_PEDV,
10 IWT_2_JPN_2014_nsp3_VIPR_ALG4_948549326_10132_10971_1_2014_04_Japan_Pig_PEDV,
11 JS2008_nsp3_VIPR_ALG4_459357910_10166_11005_1_2008_China_Swine_PEDV,
12 USA_OK10240_6_2017_nsp3_VIPR_ALG4_AVI57395_1_10190_11029_1_2017_02_07_USA_Swine_PEDV,
13 PEDV_2098_1_Malaga_Casares_nsp3_VIPR_ALG4_QKV43816_1_10194_11033_1_2018_01_11_Spain_Swine_PEDV,
14 USA_Minnesota71_2013_nsp3_VIPR_ALG4_658130736_10155_10994_1_2013_11_25_USA_Swine_PEDV,
15 PEDV_LS_nsp3_VIPR_ALG4_761662564_10190_11029_1_2014_01_China_Swine_PEDV,
16 KNU_1305_nsp3_VIPR_ALG4_659495322_10190_11029_1_2013_12_South_Korea_Swine_PEDV,
17 JSX2014_nsp3_VIPR_ALG4_AZN28592_1_10190_11029_1_2014_China_Swine_PEDV,
18 PEDV_AUSTRIA_L01062_M10_15_01_2015_nsp3_VIPR_ALG4_SNT95670_1_10168_11007_1_NA_NA_Unknown_PEDV,
19 COL_Antioquia06285_2015_nsp3_VIPR_ALG4_QGQ60275_1_10182_11021_1_2015_05_20_Colombia_Swine_PEDV,
20 CH_SXYL_2016_nsp3_VIPR_ALG4_ASY04642_1_10189_11028_1_2016_09_10_China_Swine_PEDV,
21 CH_SCZG_2017_nsp3_VIPR_ALG4_AZL47197_1_10190_11029_1_2017_01_05_China_Swine_PEDV,
22 USA_Iowa23_57_2013_nsp3_VIPR_ALG4_658130337_10155_10994_1_2013_10_20_USA_Swine_PEDV,
23 USA_Minnesota289_2014_nsp3_VIPR_ALG4_825144643_10145_10984_1_2014_04_02_USA_Swine_PEDV,
24 KGW_1_JPN_2014_nsp3_VIPR_ALG4_948549221_10132_10971_1_2014_04_Japan_Pig_PEDV,
25 PEDV_GER_L00855_K14_14_02_2014_nsp3_VIPR_ALG4_SNQ28081_1_10185_11024_1_NA_NA_Unknown_PEDV,
26 COL_Antioquia_2014_nsp3_VIPR_ALG4_QGQ60251_1_10173_11012_1_2015_04_27_Colombia_Swine_PEDV,
27 Italy_7239_2009_nsp3_VIPR_ALG4_960380158_10161_11000_1_2009_01_14_Italy_Swine_PEDV,
28 GDS16_nsp3_VIPR_ALG4_QCQ19941_1_10190_11029_1_2011_05_25_China_Swine_PEDV,
29 USA_Minnesota100_2013_nsp3_VIPR_ALG4_658130631_10155_10994_1_2013_12_14_USA_Swine_PEDV,
30 KNU_1601_nsp3_VIPR_ALG4_ASA69723_1_10190_11029_1_2016_03_South_Korea_Swine_PEDV,
31 PEDV_GER_L00901_V215_1978_nsp3_VIPR_ALG4_SNC44844_1_10183_11022_1_NA_NA_Unknown_PEDV,
32 COL_Cundinamarca_2014_nsp3_VIPR_ALG4_984943312_10168_11007_1_2014_05_02_Colombia_Swine_PEDV,
33 CHN_SH_2016_4_2016_nsp3_VIPR_ALG4_AVK78146_1_9898_10737_1_2016_01_20_China_Swine_PEDV,
34 USA_Minnesota79_2013_nsp3_VIPR_ALG4_658130512_10155_10994_1_2013_11_30_USA_Swine_PEDV,
35 HUN_5031_2016_nsp3_VIPR_ALG4_ASB30080_1_10178_11017_1_2016_03_01_Hungary_Swine_PEDV,
36 USA_Minnesota408_2014_nsp3_VIPR_ALG4_825144930_10142_10981_1_2014_08_28_USA_Swine_PEDV,
37 KNU_1807_nsp3_VIPR_ALG4_QBA57557_1_10169_11008_1_2018_03_South_Korea_Swine_PEDV,
38 PEDV_GER_L00927_K20_14_02_2014_nsp3_VIPR_ALG4_SNQ27984_1_10190_11029_1_NA_NA_Unknown_PEDV,
39 COL_ValledelCauca_2015_nsp3_VIPR_ALG4_QGQ60293_1_10168_11007_1_2017_07_01_Colombia_Swine_PEDV,
40 USA_Illinois259_2014_nsp3_VIPR_ALG4_825144552_10145_10984_1_2014_03_13_USA_Swine_PEDV,
41 KNU_1710_nsp3_VIPR_ALG4_AWM11497_1_10190_11029_1_2017_04_South_Korea_Swine_PEDV,
42 USA_Minnesota86_2013_nsp3_VIPR_ALG4_658130547_10155_10994_1_2013_12_07_USA_Swine_PEDV,
43 KUIDL_PED_2014_007_nsp3_VIPR_ALG4_614790571_9969_10808_1_2014_02_South_Korea_Swine_PEDV,
44 PEDV_GER_L00999_K06_15_07_2015_nsp3_VIPR_ALG4_SNQ27940_1_10166_11005_1_NA_NA_Unknown_PEDV,
45 CH_SCGA_2017_nsp3_VIPR_ALG4_AZL47191_1_10190_11029_1_2017_01_05_China_Swine_PEDV,
46 FKO_1_JPN_2014_nsp3_VIPR_ALG4_948549130_10132_10971_1_2014_03_Japan_Pig_PEDV,
47 USA_SouthDakota285_2014_nsp3_VIPR_ALG4_825144566_10145_10984_1_2014_04_02_USA_Swine_PEDV,
48 PC22A_P20_nsp3_VIPR_ALG4_APX55516_1_10181_11020_1_2013_10_01_USA_Swine_PEDV,
49 USA_OK10240_8_2017_nsp3_VIPR_ALG4_AVI57402_1_10190_11029_1_2017_02_07_USA_Swine_PEDV,
50 MN_nsp3_VIPR_ALG4_551485549_10190_11029_1_2013_06_19_USA_Swine_PEDV,
51 PEDV_GER_L01015_K01_15_05_2015_nsp3_VIPR_ALG4_SNQ28056_1_10190_11029_1_NA_NA_Unknown_PEDV,
52 GDS01_nsp3_VIPR_ALG4_815939790_10190_11029_1_2012_11_10_China_Swine_PEDV,
53 GDS52_nsp3_VIPR_ALG4_QCQ20067_1_10190_11029_1_2017_02_25_China_Swine_PEDV,
54 USA_Oklahoma477_2014_nsp3_VIPR_ALG4_825144888_10145_10984_1_2014_12_12_USA_Swine_PEDV,
55 USA_Texas128_2013_nsp3_VIPR_ALG4_658130673_10155_10994_1_2013_11_12_USA_Swine_PEDV,
56 PEDV_GER_L01018_K01_15_08_2015_nsp3_VIPR_ALG4_SNQ27907_1_10190_11029_1_NA_NA_Unknown_PEDV,
57 OH10123_14_nsp3_VIPR_ALG4_946969657_10190_11029_1_2014_04_22_USA_Swine_PEDV,
58 PEDV_GER_L01061_K07_15_03_2015_nsp3_VIPR_ALG4_SNT95658_1_10190_11029_1_NA_NA_Unknown_PEDV,
59 GDS08_nsp3_VIPR_ALG4_QCQ19935_1_10190_11029_1_2011_02_10_China_Swine_PEDV,
60 CH_HNZZ47_2016_nsp3_VIPR_ALG4_1111331903_10181_11020_1_2016_05_China_Swine_PEDV,
61 CHN_SH_2012_5_2012_nsp3_VIPR_ALG4_AVK78140_1_10190_11029_1_2012_02_21_China_Swine_PEDV,
62 PEDV_1453_Zaragoza_Tauste_nsp3_VIPR_ALG4_QKV43720_1_10155_10994_1_2014_04_24_Spain_Swine_PEDV,
63 USA_Minnesota402_2014_nsp3_VIPR_ALG4_825144454_10145_10984_1_2014_08_18_USA_Swine_PEDV,
64 PEDV_LNsy_nsp3_VIPR_ALG4_ATG31099_1_10190_11029_1_2015_03_02_China_Swine_PEDV,
65 CH_BJ11_2016_nsp3_VIPR_ALG4_AYP73644_1_10190_11029_1_2016_11_China_Unknown_PEDV,
66 Br1_87_nsp3_VIPR_ALG4_SNW64183_1_10190_11029_1_NA_NA_Unknown_PEDV,
67 YN15_nsp3_VIPR_ALG4_946526331_10190_11029_1_2013_10_05_China_Swine_PEDV,
68 GDS33_nsp3_VIPR_ALG4_QCQ19899_1_10190_11029_1_2014_07_28_China_Swine_PEDV,
69 PEDV_USA_Texas132_2015_nsp3_VIPR_ALG4_1034700865_10161_11000_1_2015_11_05_USA_Swine_PEDV,
70 PEDV_GER_L00857_K14_14_04_2014_nsp3_VIPR_ALG4_SNQ28009_1_10171_11010_1_NA_NA_Unknown_PEDV,
71 85_7_nsp3_VIPR_ALG4_AST13214_1_10177_11016_1_2013_05_China_Swine_PEDV,
72 PEDV_MEX_GTO_02_2016_nsp3_VIPR_ALG4_AVU05338_1_9996_10835_1_2016_07_19_Mexico_Swine_PEDV,
73 GDS22_nsp3_VIPR_ALG4_QCQ19833_1_10190_11029_1_2012_09_23_China_Swine_PEDV,
74 OKY_1_JPN_2014_nsp3_VIPR_ALG4_948549382_10132_10971_1_2014_03_Japan_Pig_PEDV,
75 USA_Illinois260_2014_nsp3_VIPR_ALG4_825144671_10145_10984_1_2014_03_14_USA_Swine_PEDV,
76 PEDV_H3_Barcelona_Vic_nsp3_VIPR_ALG4_QKV43846_1_10194_11033_1_2019_01_07_Spain_Swine_PEDV,
77 USA_Missouri164_2014_nsp3_VIPR_ALG4_825144804_10145_10984_1_2014_02_26_USA_Swine_PEDV,
78 USA_Minnesota61_2013_nsp3_VIPR_ALG4_658130729_10155_10994_1_2013_11_18_USA_Swine_PEDV,
79 PEDV_MEX_JAL_03_2017_nsp3_VIPR_ALG4_AVU05380_1_10020_10859_1_2017_02_10_Mexico_Swine_PEDV,
80 GDS28_nsp3_VIPR_ALG4_QCQ19857_1_10190_11029_1_2012_12_13_China_Swine_PEDV,
81 TC_Iowa106_PV39_P1_nsp3_VIPR_ALG4_684183346_10178_11017_1_2013_12_USA_Swine_PEDV,
82 USA_Minnesota379_2014_nsp3_VIPR_ALG4_825144881_10145_10984_1_2014_06_10_USA_Swine_PEDV,
83 PEDV_MEX_VER_02_2015_nsp3_VIPR_ALG4_AVU05485_1_10020_10859_1_2015_10_21_Mexico_Swine_PEDV,
84 USA_NorthCarolina40_2013_nsp3_VIPR_ALG4_658130316_10155_10994_1_2013_10_05_USA_Swine_PEDV,
85 PEDV_MEX_MICH_02_2015_nsp3_VIPR_ALG4_AVU05443_1_10020_10859_1_2015_03_20_Mexico_Swine_PEDV,
86 CH_TP_4_3_2018_nsp3_VIPR_ALG4_QCC26593_1_10192_11031_1_2018_China_Swine_PEDV,
87 USA_NC_2013_49469_nsp3_VIPR_ALG4_874010829_10190_11029_1_2013_12_10_USA_Swine_PEDV,
88 USA_Oklahoma38_2013_nsp3_VIPR_ALG4_658130302_10155_10994_1_2013_09_07_USA_Swine_PEDV,
89 USA_Minnesota85_2013_nsp3_VIPR_ALG4_658130540_10155_10994_1_2013_12_04_USA_Swine_PEDV,
90 SHXX1902_nsp3_VIPR_ALG4_QOC68599_1_10191_11030_1_2019_02_China_Swine_PEDV
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:3.948962e-04,59:9.376269e-04,((((2:4.071735e-04,(3:4.995657e-04,87:4.779731e-04)0.806:9.665337e-04,4:9.324954e-04,5:3.963600e-04,6:9.456058e-04,((7:1.477583e-03,13:4.111358e-04,76:4.033344e-04)0.895:1.572911e-03,18:3.884986e-04,25:4.083604e-04,35:9.651958e-04,(36:3.916035e-04,48:3.866347e-04)1.000:2.094824e-03,38:3.915562e-04,44:4.114955e-04,51:3.569894e-04,56:4.066940e-04,58:4.252413e-04,62:3.834179e-04,65:2.942984e-03,70:3.860754e-04)0.641:1.300204e-03,(8:3.854016e-04,86:4.011896e-04)1.000:1.504745e-03,9:3.933034e-04,10:3.849953e-04,(12:4.807025e-04,49:4.597118e-04)0.821:9.413578e-04,14:3.779335e-04,15:5.429557e-03,16:3.936581e-04,17:9.278254e-04,19:3.572715e-04,20:9.681522e-04,21:3.943536e-04,22:3.781737e-04,23:3.662437e-04,24:4.137244e-04,26:3.773250e-04,29:4.091833e-04,30:2.551111e-03,32:4.121677e-04,(33:4.701727e-04,68:1.023135e-03)0.816:9.703472e-04,34:4.021788e-04,37:4.173519e-03,39:3.700102e-04,40:3.838888e-04,41:2.124005e-03,42:3.797560e-04,43:4.006853e-04,45:3.747153e-04,46:4.006270e-04,47:3.930011e-04,50:3.726686e-04,(52:2.558332e-03,67:5.968388e-04)0.571:9.244342e-04,54:9.559454e-04,55:3.949928e-04,57:3.522206e-04,60:2.579187e-03,61:9.992470e-04,63:4.127285e-04,64:3.892728e-04,69:3.900521e-04,72:2.122859e-03,73:3.998513e-04,74:3.940075e-04,75:3.624468e-04,77:9.216368e-04,78:3.888031e-04,79:1.506571e-03,80:1.491512e-03,81:3.913063e-04,82:3.869816e-04,83:9.509172e-04,84:9.254773e-04,85:4.086675e-04,88:4.188917e-04,89:3.999735e-04,90:1.516563e-03)0.997:2.486664e-03,(11:5.425506e-03,((31:4.013955e-04,66:3.651726e-04)0.905:9.403654e-04,71:1.023916e-03)1.000:8.148724e-03)1.000:2.590801e-03,27:6.087324e-03)1.000:2.272133e-03,53:1.014532e-02)1.000:3.288559e-03,28:5.322361e-04)0.941:1.392454e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:3.948962e-04,59:9.376269e-04,((((2:4.071735e-04,(3:4.995657e-04,87:4.779731e-04):9.665337e-04,4:9.324954e-04,5:3.963600e-04,6:9.456058e-04,((7:1.477583e-03,13:4.111358e-04,76:4.033344e-04):1.572911e-03,18:3.884986e-04,25:4.083604e-04,35:9.651958e-04,(36:3.916035e-04,48:3.866347e-04):2.094824e-03,38:3.915562e-04,44:4.114955e-04,51:3.569894e-04,56:4.066940e-04,58:4.252413e-04,62:3.834179e-04,65:2.942984e-03,70:3.860754e-04):1.300204e-03,(8:3.854016e-04,86:4.011896e-04):1.504745e-03,9:3.933034e-04,10:3.849953e-04,(12:4.807025e-04,49:4.597118e-04):9.413578e-04,14:3.779335e-04,15:5.429557e-03,16:3.936581e-04,17:9.278254e-04,19:3.572715e-04,20:9.681522e-04,21:3.943536e-04,22:3.781737e-04,23:3.662437e-04,24:4.137244e-04,26:3.773250e-04,29:4.091833e-04,30:2.551111e-03,32:4.121677e-04,(33:4.701727e-04,68:1.023135e-03):9.703472e-04,34:4.021788e-04,37:4.173519e-03,39:3.700102e-04,40:3.838888e-04,41:2.124005e-03,42:3.797560e-04,43:4.006853e-04,45:3.747153e-04,46:4.006270e-04,47:3.930011e-04,50:3.726686e-04,(52:2.558332e-03,67:5.968388e-04):9.244342e-04,54:9.559454e-04,55:3.949928e-04,57:3.522206e-04,60:2.579187e-03,61:9.992470e-04,63:4.127285e-04,64:3.892728e-04,69:3.900521e-04,72:2.122859e-03,73:3.998513e-04,74:3.940075e-04,75:3.624468e-04,77:9.216368e-04,78:3.888031e-04,79:1.506571e-03,80:1.491512e-03,81:3.913063e-04,82:3.869816e-04,83:9.509172e-04,84:9.254773e-04,85:4.086675e-04,88:4.188917e-04,89:3.999735e-04,90:1.516563e-03):2.486664e-03,(11:5.425506e-03,((31:4.013955e-04,66:3.651726e-04):9.403654e-04,71:1.023916e-03):8.148724e-03):2.590801e-03,27:6.087324e-03):2.272133e-03,53:1.014532e-02):3.288559e-03,28:5.322361e-04):1.392454e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1532.72 -1558.23
2 -1532.53 -1563.14
--------------------------------------
TOTAL -1532.62 -1562.45
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.082739 0.000170 0.058873 0.108173 0.081693 1366.45 1430.87 1.001
r(A<->C){all} 0.138947 0.002694 0.049481 0.244073 0.133626 467.40 499.87 1.000
r(A<->G){all} 0.206684 0.003643 0.100408 0.328648 0.203263 412.69 440.44 1.001
r(A<->T){all} 0.021244 0.000259 0.000112 0.052659 0.017624 736.04 764.58 1.000
r(C<->G){all} 0.022645 0.000482 0.000028 0.066081 0.016052 588.27 622.46 1.001
r(C<->T){all} 0.522248 0.004724 0.388374 0.658400 0.523663 566.60 630.99 1.000
r(G<->T){all} 0.088232 0.000960 0.033792 0.150853 0.084717 507.55 643.64 1.000
pi(A){all} 0.199486 0.000191 0.171021 0.224560 0.199188 847.72 1037.71 1.001
pi(C){all} 0.181248 0.000167 0.156598 0.205652 0.181102 1171.41 1249.97 1.000
pi(G){all} 0.214315 0.000188 0.187417 0.241479 0.214298 968.45 1047.88 1.000
pi(T){all} 0.404951 0.000270 0.373708 0.437977 0.405219 1027.49 1097.17 1.001
alpha{1,2} 0.389585 0.365892 0.000105 1.494356 0.185571 624.66 800.82 1.000
alpha{3} 1.839187 1.473654 0.181159 4.345382 1.560764 1070.84 1219.18 1.000
pinvar{all} 0.325976 0.030697 0.000069 0.602949 0.331244 793.16 803.23 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\ ***************** TYPES OF STANDARD ANALYSES ***************** (1) Selection Analyses (2) Evolutionary Hypothesis Testing (3) Relative evolutionary rate inference (4) Coevolutionary analysis (5) Basic Analyses (6) Codon Selection Analyses (7) Compartmentalization (8) Data File Tools (9) Miscellaneous (10) Model Comparison (11) Kernel Analysis Tools (12) Molecular Clock (13) Phylogeny Reconstruction (14) Positive Selection (15) Recombination (16) Selection/Recombination (17) Relative Rate (18) Relative Ratio (19) Substitution Rates Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' ***************** (1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution). (2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood). (3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting). (4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection). (5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification). (6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood). (7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation). Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types): Analysis Description -------------------- Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a coding sequence alignment to determine whether some sites have been subject to pervasive purifying or diversifying selection. v2.1 introduces two more methods for estimating the posterior distribution of grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation Bayes approximation (fastest). Please note that a FUBAR analysis generates a cache and a results JSON file in the same directory as directory as the original alignment. HyPhy needs to have write privileges to this directory. For example if the original file is in /home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there will also exist FUBAR-generated files /home/sergei/FUBAR/data/pol.nex.FUBAR.json, /home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide checkpointing so that a partially completed analysis can be restarted. - __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree (one per partition) - __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring selection (2013), Mol Biol Evol. 30(5):1196-205 - __Written by__: Sergei L Kosakovsky Pond - __Contact Information__: spond@temple.edu - __Analysis Version__: 2.1 ####Choose Genetic Code 1. [**Universal**] Universal code. (Genebank transl_table=1). 2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2). 3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3). 4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4). 5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5). 6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6). 7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9). 8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10). 9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12). 10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13). 11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14). 12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15). 13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16). 14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21). 15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22). 16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23). 17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24). 18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25). 19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26). >Please choose an option (or press q to cancel selection): >Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`) >A tree was found in the data file: `(C14,C117,((((C65,(C598,C591),C287,C189,C195,((C325,C331,C377),C338,C344,C183,(C552,C303),C356,C362,C368,C369,C374,C313,C34,C347),(C71,C70),C589,C203,(C599,C600),C565,C381,C224,C211,C81,C68,C63,C504,C543,C223,C87,C528,C235,C93,(C31,C141),C571,C247,C99,C482,C243,C576,C259,C60,C105,C620,C271,(C111,C641),C619,C624,C283,C52,C32,C551,C380,C417,C385,C129,C291,C483,C583,C559,C391,C135,C441,C549,C407,C595,C397,C615,C575,C437),(C207,((C350,C27),C4)),C206),C159),C123))` >Would you like to use it (y/n)? >Loaded a multiple sequence alignment with **90** sequences, **280** codons, and **1** partitions from `/data//pss_subsets/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1.fna` > FUBAR will write cache and result files to _/data//pss_subsets/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1/LZW_nsp3_VIPR_ALG4_672096717_10190_11029_1_2012_02_China_Unknown_PEDV.result.1.fna.FUBAR.json_, respectively > Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer): ####Posterior estimation method 1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation) 2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed) 3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default) >Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5): ### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model * Log(L) = -2151.92, AIC-c = 4530.17 (113 estimated parameters) * Tree length (expected substitutions/site) for partition 1 : 0.191 ### Computing the phylogenetic likelihood function on the grid * Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid * Best scaling achieved for * synonymous rate = 2.815 * non-synonymous rate = 0.357 * Computing conditional site likelihoods on a 20 x 20 rate grid ### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights * Using the following settings * Dirichlet alpha : 0.5 ### Tabulating site-level results | Codon | Partition | alpha | beta |Posterior prob for positive selection| |:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:| | 135 | 1 | 0.739 | 6.485 | Pos. posterior = 0.9564 | ---- ## FUBAR inferred 1 sites subject to diversifying positive selection at posterior probability >= 0.9 Of these, 0.04 are expected to be false positives (95% confidence interval of 0-1 )
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
