--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1859.01 -1884.63
2 -1857.15 -1882.63
--------------------------------------
TOTAL -1857.70 -1884.06
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.107596 0.000191 0.082229 0.135381 0.106466 1440.40 1470.70 1.000
r(A<->C){all} 0.072685 0.000978 0.020225 0.134386 0.069066 736.64 802.47 1.004
r(A<->G){all} 0.241763 0.002233 0.153562 0.335791 0.240157 656.15 708.68 1.000
r(A<->T){all} 0.031404 0.000264 0.004043 0.063136 0.029129 1014.05 1051.64 1.000
r(C<->G){all} 0.078784 0.001032 0.021943 0.141653 0.075751 477.46 520.40 1.001
r(C<->T){all} 0.381100 0.002832 0.275694 0.480473 0.380228 635.47 743.90 1.002
r(G<->T){all} 0.194265 0.001429 0.122526 0.266972 0.191604 606.32 651.95 1.000
pi(A){all} 0.235871 0.000186 0.210441 0.264507 0.235887 1027.67 1128.84 1.000
pi(C){all} 0.184749 0.000153 0.161905 0.210168 0.184510 919.20 996.61 1.000
pi(G){all} 0.237047 0.000196 0.211339 0.266437 0.236911 1017.46 1041.09 1.001
pi(T){all} 0.342333 0.000236 0.312316 0.372519 0.342701 928.33 1009.91 1.002
alpha{1,2} 0.942695 0.913947 0.000496 2.893835 0.648502 1250.55 1256.61 1.000
alpha{3} 1.376686 1.046723 0.109621 3.503814 1.113900 1189.02 1239.85 1.000
pinvar{all} 0.271966 0.025781 0.000109 0.545554 0.264760 840.70 966.38 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
-- Starting log on Thu Nov 17 16:36:45 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result--
-- Starting log on Thu Nov 17 16:40:24 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result--
-- Starting log on Thu Nov 17 16:36:45 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result--
-- Starting log on Fri Nov 18 02:10:51 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result/gapped_alignment/fubar,LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 90 taxa and 906 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C34
Taxon 2 -> C65
Taxon 3 -> C619
Taxon 4 -> C295
Taxon 5 -> C192
Taxon 6 -> C196
Taxon 7 -> C325
Taxon 8 -> C93
Taxon 9 -> C597
Taxon 10 -> C206
Taxon 11 -> C208
Taxon 12 -> C606
Taxon 13 -> C331
Taxon 14 -> C75
Taxon 15 -> C231
Taxon 16 -> C651
Taxon 17 -> C230
Taxon 18 -> C220
Taxon 19 -> C337
Taxon 20 -> C90
Taxon 21 -> C72
Taxon 22 -> C507
Taxon 23 -> C545
Taxon 24 -> C224
Taxon 25 -> C344
Taxon 26 -> C87
Taxon 27 -> C228
Taxon 28 -> C132
Taxon 29 -> C531
Taxon 30 -> C236
Taxon 31 -> C350
Taxon 32 -> C16
Taxon 33 -> C366
Taxon 34 -> C571
Taxon 35 -> C13
Taxon 36 -> C555
Taxon 37 -> C248
Taxon 38 -> C356
Taxon 39 -> C99
Taxon 40 -> C504
Taxon 41 -> C252
Taxon 42 -> C579
Taxon 43 -> C260
Taxon 44 -> C362
Taxon 45 -> C60
Taxon 46 -> C105
Taxon 47 -> C642
Taxon 48 -> C312
Taxon 49 -> C603
Taxon 50 -> C272
Taxon 51 -> C368
Taxon 52 -> C111
Taxon 53 -> C182
Taxon 54 -> C628
Taxon 55 -> C627
Taxon 56 -> C389
Taxon 57 -> C284
Taxon 58 -> C374
Taxon 59 -> C117
Taxon 60 -> C326
Taxon 61 -> C97
Taxon 62 -> C317
Taxon 63 -> C552
Taxon 64 -> C380
Taxon 65 -> C123
Taxon 66 -> C68
Taxon 67 -> C648
Taxon 68 -> C165
Taxon 69 -> C427
Taxon 70 -> C351
Taxon 71 -> C572
Taxon 72 -> C385
Taxon 73 -> C129
Taxon 74 -> C315
Taxon 75 -> C493
Taxon 76 -> C381
Taxon 77 -> C584
Taxon 78 -> C561
Taxon 79 -> C391
Taxon 80 -> C135
Taxon 81 -> C465
Taxon 82 -> C559
Taxon 83 -> C411
Taxon 84 -> C596
Taxon 85 -> C397
Taxon 86 -> C141
Taxon 87 -> C615
Taxon 88 -> C625
Taxon 89 -> C575
Taxon 90 -> C441
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668737453
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1749990174
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 1589890515
Seed = 1763789362
Swapseed = 1668737453
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 27 unique site patterns
Division 2 has 24 unique site patterns
Division 3 has 68 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -4869.208902 -- 149.597508
Chain 2 -- -4860.473863 -- 149.597508
Chain 3 -- -4812.597608 -- 149.597508
Chain 4 -- -4881.722240 -- 149.597508
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -4908.448883 -- 149.597508
Chain 2 -- -4904.458990 -- 149.597508
Chain 3 -- -4821.420576 -- 149.597508
Chain 4 -- -4884.933278 -- 149.597508
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-4869.209] (-4860.474) (-4812.598) (-4881.722) * [-4908.449] (-4904.459) (-4821.421) (-4884.933)
1000 -- (-3384.272) (-3444.134) [-3173.580] (-3280.793) * (-3382.449) (-3449.810) (-3288.917) [-3244.111] -- 0:49:57
2000 -- (-3153.842) (-2952.041) [-2857.030] (-2915.311) * (-3063.999) (-3183.513) [-2909.138] (-2947.768) -- 0:41:35
3000 -- (-2957.856) (-2762.995) [-2729.845] (-2740.537) * (-2838.822) (-3047.502) (-2804.865) [-2694.093] -- 0:44:18
4000 -- (-2908.946) [-2651.544] (-2687.381) (-2662.249) * (-2749.844) (-2934.253) (-2713.648) [-2604.888] -- 0:41:30
5000 -- (-2870.485) [-2563.230] (-2673.778) (-2626.677) * (-2660.833) (-2851.344) (-2667.843) [-2564.661] -- 0:43:07
Average standard deviation of split frequencies: 0.087065
6000 -- (-2833.405) [-2523.209] (-2637.036) (-2583.100) * (-2636.136) (-2797.513) (-2645.384) [-2511.380] -- 0:41:25
7000 -- (-2834.144) [-2528.459] (-2586.532) (-2583.455) * (-2646.715) (-2769.328) (-2591.696) [-2498.721] -- 0:42:33
8000 -- (-2807.158) [-2507.518] (-2570.347) (-2598.590) * (-2596.173) (-2764.211) (-2575.779) [-2493.140] -- 0:41:20
9000 -- (-2769.642) [-2500.653] (-2543.298) (-2578.526) * (-2576.323) (-2733.396) (-2554.221) [-2495.196] -- 0:42:12
10000 -- (-2760.836) [-2494.404] (-2535.017) (-2553.989) * (-2576.971) (-2744.906) (-2550.639) [-2503.424] -- 0:41:15
Average standard deviation of split frequencies: 0.129243
11000 -- (-2751.949) [-2497.425] (-2548.936) (-2546.389) * (-2562.624) (-2719.607) [-2521.935] (-2522.350) -- 0:41:57
12000 -- (-2743.861) [-2497.558] (-2546.568) (-2543.375) * (-2565.094) (-2706.988) (-2532.158) [-2484.856] -- 0:41:10
13000 -- (-2731.932) [-2487.787] (-2537.107) (-2513.446) * (-2545.256) (-2683.573) (-2534.544) [-2502.101] -- 0:41:45
14000 -- (-2735.082) [-2490.065] (-2534.461) (-2512.542) * (-2554.789) (-2707.236) [-2514.091] (-2494.753) -- 0:41:05
15000 -- (-2707.585) [-2488.416] (-2532.410) (-2500.526) * (-2540.246) (-2701.290) (-2534.026) [-2483.191] -- 0:41:35
Average standard deviation of split frequencies: 0.129933
16000 -- (-2694.063) [-2472.451] (-2531.897) (-2511.477) * (-2516.534) (-2691.729) (-2514.100) [-2479.512] -- 0:41:00
17000 -- (-2683.504) [-2477.450] (-2518.511) (-2504.198) * (-2530.423) (-2711.559) (-2506.260) [-2483.919] -- 0:40:28
18000 -- (-2702.461) [-2482.929] (-2528.268) (-2492.473) * (-2501.293) (-2710.043) (-2517.308) [-2469.528] -- 0:40:00
19000 -- (-2684.702) [-2465.981] (-2522.576) (-2491.855) * (-2485.895) (-2714.139) (-2507.182) [-2472.966] -- 0:39:35
20000 -- (-2687.147) [-2480.984] (-2526.235) (-2490.361) * (-2494.337) (-2700.078) (-2514.305) [-2488.358] -- 0:40:01
Average standard deviation of split frequencies: 0.124187
21000 -- (-2688.469) [-2475.790] (-2514.309) (-2479.508) * [-2489.093] (-2679.806) (-2520.975) (-2492.270) -- 0:39:37
22000 -- (-2670.393) [-2464.241] (-2524.899) (-2481.464) * (-2487.537) (-2719.247) [-2499.962] (-2496.264) -- 0:39:16
23000 -- (-2671.072) [-2467.255] (-2537.718) (-2493.359) * [-2492.820] (-2686.075) (-2502.068) (-2489.802) -- 0:38:56
24000 -- (-2669.874) [-2468.388] (-2519.808) (-2505.267) * (-2495.425) (-2669.541) (-2487.587) [-2478.537] -- 0:39:18
25000 -- (-2688.418) [-2474.186] (-2510.710) (-2504.057) * (-2502.573) (-2700.090) [-2474.018] (-2474.653) -- 0:39:00
Average standard deviation of split frequencies: 0.090272
26000 -- (-2665.222) [-2484.926] (-2527.814) (-2504.544) * (-2499.838) (-2674.025) [-2468.111] (-2484.319) -- 0:39:20
27000 -- (-2669.028) (-2494.371) (-2530.963) [-2505.406] * (-2510.654) (-2652.808) [-2472.182] (-2476.283) -- 0:39:02
28000 -- (-2664.445) (-2506.835) [-2493.302] (-2493.695) * (-2520.021) (-2643.492) [-2466.072] (-2476.793) -- 0:38:45
29000 -- (-2675.233) (-2492.500) [-2490.050] (-2481.335) * (-2517.579) (-2660.207) (-2475.833) [-2471.898] -- 0:39:03
30000 -- (-2672.303) (-2490.659) (-2524.495) [-2472.294] * (-2498.820) (-2677.383) (-2499.391) [-2456.925] -- 0:38:48
Average standard deviation of split frequencies: 0.078317
31000 -- (-2657.372) (-2493.597) (-2507.837) [-2491.741] * (-2496.624) (-2669.218) (-2494.891) [-2479.998] -- 0:39:04
32000 -- (-2667.559) [-2480.781] (-2504.274) (-2488.046) * (-2506.196) (-2668.855) (-2492.707) [-2468.854] -- 0:38:49
33000 -- (-2658.224) [-2493.239] (-2485.727) (-2491.721) * (-2510.728) (-2688.163) (-2487.155) [-2451.175] -- 0:38:34
34000 -- (-2660.841) (-2493.622) (-2483.836) [-2485.205] * (-2534.323) (-2677.428) [-2472.746] (-2462.381) -- 0:38:49
35000 -- (-2655.494) (-2497.137) (-2485.325) [-2469.253] * (-2523.609) (-2675.164) (-2477.311) [-2478.096] -- 0:38:36
Average standard deviation of split frequencies: 0.075786
36000 -- (-2673.556) (-2493.891) (-2491.693) [-2465.026] * (-2512.106) (-2702.777) [-2472.499] (-2482.089) -- 0:38:49
37000 -- (-2671.125) (-2494.565) (-2480.437) [-2459.073] * (-2515.679) (-2688.659) (-2478.197) [-2464.809] -- 0:38:36
38000 -- (-2656.445) (-2491.227) (-2482.473) [-2462.781] * (-2523.159) (-2686.187) (-2488.951) [-2462.555] -- 0:38:49
39000 -- (-2663.949) (-2485.241) (-2508.068) [-2460.396] * (-2513.795) (-2699.394) (-2468.294) [-2472.422] -- 0:38:36
40000 -- (-2653.930) (-2477.815) (-2503.029) [-2461.750] * (-2514.701) (-2705.892) (-2472.267) [-2453.488] -- 0:38:48
Average standard deviation of split frequencies: 0.076093
41000 -- (-2657.246) (-2483.265) (-2493.796) [-2466.913] * (-2503.717) (-2684.299) (-2478.517) [-2470.317] -- 0:38:35
42000 -- (-2665.521) [-2471.916] (-2499.296) (-2490.689) * (-2502.207) (-2675.291) (-2475.880) [-2468.880] -- 0:38:46
43000 -- (-2665.513) (-2486.344) (-2501.244) [-2465.655] * (-2515.818) (-2681.048) (-2461.800) [-2466.767] -- 0:38:34
44000 -- (-2665.259) (-2500.355) (-2478.522) [-2461.280] * (-2507.040) (-2683.284) [-2453.075] (-2473.055) -- 0:38:44
45000 -- (-2661.609) (-2482.328) (-2486.392) [-2468.036] * (-2497.477) (-2691.778) [-2474.298] (-2478.422) -- 0:38:33
Average standard deviation of split frequencies: 0.072495
46000 -- (-2661.023) (-2462.959) (-2492.657) [-2464.482] * (-2497.289) (-2682.801) [-2475.053] (-2487.272) -- 0:38:42
47000 -- (-2657.762) [-2467.675] (-2486.400) (-2464.660) * (-2489.033) (-2685.108) [-2471.069] (-2470.642) -- 0:38:31
48000 -- (-2661.351) [-2460.205] (-2481.151) (-2483.681) * (-2504.086) (-2668.325) [-2466.323] (-2469.217) -- 0:38:40
49000 -- (-2662.941) [-2460.780] (-2489.030) (-2483.234) * (-2475.780) (-2667.649) (-2462.627) [-2468.545] -- 0:38:29
50000 -- (-2692.551) [-2463.390] (-2474.574) (-2480.128) * (-2494.166) (-2678.241) [-2453.348] (-2482.847) -- 0:38:19
Average standard deviation of split frequencies: 0.069078
51000 -- (-2683.738) [-2465.313] (-2496.323) (-2505.982) * (-2485.911) (-2680.221) [-2466.239] (-2487.160) -- 0:38:27
52000 -- (-2695.482) [-2454.730] (-2486.113) (-2514.832) * (-2482.087) (-2685.530) [-2457.935] (-2507.454) -- 0:38:17
53000 -- (-2676.904) [-2450.139] (-2490.891) (-2493.620) * (-2471.921) (-2664.032) [-2454.685] (-2503.083) -- 0:38:24
54000 -- (-2655.781) [-2442.226] (-2480.641) (-2487.229) * (-2459.475) (-2661.523) [-2454.273] (-2492.913) -- 0:38:32
55000 -- (-2657.314) [-2445.762] (-2497.531) (-2478.684) * [-2471.815] (-2670.850) (-2455.804) (-2505.872) -- 0:38:22
Average standard deviation of split frequencies: 0.068645
56000 -- (-2655.279) [-2453.416] (-2505.393) (-2461.236) * [-2464.553] (-2655.268) (-2458.421) (-2495.369) -- 0:38:29
57000 -- (-2668.964) (-2460.072) (-2507.575) [-2456.550] * [-2459.613] (-2653.339) (-2463.034) (-2498.829) -- 0:38:19
58000 -- (-2663.778) [-2451.320] (-2491.946) (-2472.548) * [-2469.130] (-2638.643) (-2461.268) (-2523.469) -- 0:38:26
59000 -- (-2665.888) (-2462.912) (-2486.686) [-2458.280] * [-2451.240] (-2642.348) (-2456.974) (-2502.047) -- 0:38:16
60000 -- (-2671.841) (-2471.714) (-2493.676) [-2474.124] * [-2460.419] (-2652.393) (-2451.950) (-2495.667) -- 0:38:23
Average standard deviation of split frequencies: 0.066347
61000 -- (-2674.168) (-2479.407) (-2481.458) [-2468.560] * (-2462.204) (-2655.886) [-2454.297] (-2491.622) -- 0:38:13
62000 -- (-2667.225) (-2471.954) [-2479.228] (-2469.793) * (-2471.052) (-2678.169) [-2451.296] (-2471.101) -- 0:38:04
63000 -- (-2667.178) [-2468.876] (-2486.826) (-2498.406) * (-2480.475) (-2675.772) [-2469.810] (-2480.582) -- 0:38:10
64000 -- (-2645.012) [-2468.871] (-2483.480) (-2471.760) * (-2483.009) (-2657.777) [-2467.394] (-2477.362) -- 0:38:01
65000 -- (-2652.472) [-2463.782] (-2476.225) (-2476.710) * (-2477.405) (-2653.564) [-2471.735] (-2485.969) -- 0:38:07
Average standard deviation of split frequencies: 0.058280
66000 -- (-2659.334) [-2455.606] (-2476.801) (-2477.701) * [-2460.995] (-2668.905) (-2472.338) (-2500.183) -- 0:37:58
67000 -- (-2664.035) [-2458.191] (-2495.699) (-2472.188) * (-2479.734) (-2690.396) [-2459.310] (-2489.411) -- 0:38:03
68000 -- (-2671.205) [-2453.554] (-2496.909) (-2465.569) * (-2489.761) (-2678.600) [-2453.636] (-2475.575) -- 0:38:08
69000 -- (-2662.038) (-2452.402) [-2476.292] (-2484.972) * (-2494.325) (-2682.199) (-2463.022) [-2460.019] -- 0:38:00
70000 -- (-2676.206) [-2481.388] (-2489.203) (-2477.561) * [-2484.228] (-2682.272) (-2465.257) (-2486.591) -- 0:38:05
Average standard deviation of split frequencies: 0.056105
71000 -- (-2663.408) [-2471.458] (-2483.345) (-2480.566) * (-2479.385) (-2681.656) (-2480.703) [-2471.628] -- 0:38:09
72000 -- (-2650.003) (-2487.118) [-2467.505] (-2488.058) * (-2494.485) (-2676.543) [-2462.357] (-2477.733) -- 0:38:01
73000 -- (-2650.022) [-2482.215] (-2462.557) (-2479.233) * (-2471.985) (-2679.107) [-2475.244] (-2475.928) -- 0:38:05
74000 -- (-2651.408) (-2491.239) [-2457.510] (-2483.785) * (-2481.790) (-2662.010) [-2469.181] (-2470.826) -- 0:37:57
75000 -- (-2666.884) (-2473.958) [-2465.433] (-2487.361) * (-2475.094) (-2666.044) (-2499.225) [-2464.352] -- 0:38:01
Average standard deviation of split frequencies: 0.053996
76000 -- (-2671.571) [-2484.419] (-2477.244) (-2507.809) * (-2484.216) (-2678.221) (-2521.168) [-2469.386] -- 0:37:53
77000 -- (-2650.688) (-2475.858) [-2466.779] (-2513.585) * (-2485.461) (-2669.761) (-2488.265) [-2467.660] -- 0:37:57
78000 -- (-2667.450) (-2484.520) [-2484.478] (-2506.949) * (-2495.849) (-2682.489) (-2496.953) [-2468.406] -- 0:37:49
79000 -- (-2663.296) [-2486.415] (-2485.272) (-2501.103) * (-2496.820) (-2673.112) [-2481.772] (-2471.364) -- 0:37:53
80000 -- (-2660.665) (-2481.247) (-2477.783) [-2477.351] * (-2485.982) (-2668.238) (-2479.149) [-2463.392] -- 0:37:45
Average standard deviation of split frequencies: 0.054274
81000 -- (-2664.362) (-2499.753) [-2478.397] (-2485.421) * (-2524.627) (-2663.954) [-2478.123] (-2472.205) -- 0:37:37
82000 -- (-2690.940) (-2494.940) [-2485.653] (-2503.439) * (-2491.913) (-2661.465) (-2476.753) [-2465.656] -- 0:37:41
83000 -- (-2667.659) (-2504.701) [-2472.402] (-2496.661) * (-2501.571) (-2654.799) (-2477.879) [-2457.286] -- 0:37:33
84000 -- (-2667.348) (-2504.816) [-2469.254] (-2490.551) * (-2488.660) (-2658.569) [-2472.966] (-2464.041) -- 0:37:37
85000 -- (-2678.305) (-2498.028) [-2479.644] (-2491.228) * (-2493.083) (-2634.186) [-2476.841] (-2473.694) -- 0:37:29
Average standard deviation of split frequencies: 0.048331
86000 -- (-2669.974) (-2503.816) (-2487.705) [-2478.980] * (-2511.367) (-2653.720) (-2474.231) [-2464.496] -- 0:37:22
87000 -- (-2667.049) (-2499.935) [-2466.088] (-2474.346) * (-2500.733) (-2657.225) (-2460.687) [-2457.994] -- 0:37:15
88000 -- (-2643.259) (-2495.312) (-2476.125) [-2469.953] * (-2513.100) (-2663.415) (-2464.611) [-2460.854] -- 0:37:18
89000 -- (-2646.942) (-2496.317) (-2474.058) [-2465.792] * (-2489.925) (-2668.488) (-2480.639) [-2453.264] -- 0:37:11
90000 -- (-2643.997) (-2484.926) [-2468.299] (-2474.634) * (-2498.457) (-2669.238) (-2474.874) [-2472.148] -- 0:37:14
Average standard deviation of split frequencies: 0.046794
91000 -- (-2644.723) (-2494.295) [-2463.180] (-2467.374) * (-2496.084) (-2672.491) [-2459.921] (-2469.117) -- 0:37:07
92000 -- (-2662.342) (-2499.535) [-2458.417] (-2486.211) * (-2525.090) (-2679.721) [-2465.090] (-2477.323) -- 0:37:00
93000 -- (-2644.852) (-2485.501) [-2474.121] (-2501.769) * (-2506.448) (-2658.356) (-2466.009) [-2471.706] -- 0:37:03
94000 -- (-2658.940) (-2479.671) [-2471.896] (-2491.629) * (-2506.239) (-2681.921) [-2462.723] (-2479.109) -- 0:36:56
95000 -- (-2656.922) (-2492.951) [-2473.065] (-2480.026) * (-2490.899) (-2674.161) [-2458.190] (-2489.779) -- 0:36:59
Average standard deviation of split frequencies: 0.046236
96000 -- (-2653.588) (-2481.367) (-2482.280) [-2468.115] * (-2481.907) (-2669.901) [-2463.503] (-2479.790) -- 0:37:02
97000 -- (-2666.627) (-2485.521) (-2473.310) [-2482.320] * (-2469.928) (-2647.421) [-2483.642] (-2500.557) -- 0:36:55
98000 -- (-2681.739) (-2471.313) [-2475.909] (-2490.239) * [-2466.496] (-2646.830) (-2471.870) (-2505.028) -- 0:36:58
99000 -- (-2670.387) (-2469.456) [-2459.491] (-2493.541) * [-2463.013] (-2656.176) (-2472.037) (-2506.707) -- 0:36:51
100000 -- (-2670.440) [-2472.794] (-2474.920) (-2502.532) * [-2464.048] (-2663.713) (-2480.509) (-2495.141) -- 0:36:45
Average standard deviation of split frequencies: 0.044966
101000 -- (-2651.817) [-2463.934] (-2478.065) (-2487.194) * [-2479.434] (-2647.548) (-2471.687) (-2493.722) -- 0:36:47
102000 -- (-2669.241) (-2475.457) [-2477.426] (-2521.062) * (-2486.401) (-2675.448) [-2467.543] (-2485.536) -- 0:36:49
103000 -- (-2655.492) (-2476.362) [-2445.923] (-2483.085) * (-2490.634) (-2663.008) [-2468.303] (-2504.499) -- 0:36:43
104000 -- (-2666.351) (-2499.493) [-2460.880] (-2474.139) * (-2473.212) (-2655.558) [-2459.171] (-2504.197) -- 0:36:45
105000 -- (-2663.179) (-2495.029) (-2464.911) [-2469.731] * (-2476.063) (-2653.076) [-2461.484] (-2520.217) -- 0:36:47
Average standard deviation of split frequencies: 0.042594
106000 -- (-2659.778) (-2490.331) [-2463.213] (-2491.875) * [-2461.590] (-2669.070) (-2475.845) (-2529.960) -- 0:36:41
107000 -- (-2666.304) (-2499.308) [-2459.794] (-2507.314) * [-2458.813] (-2666.119) (-2478.930) (-2513.092) -- 0:36:43
108000 -- (-2647.505) (-2502.400) [-2459.208] (-2491.475) * [-2463.300] (-2650.973) (-2503.985) (-2517.520) -- 0:36:36
109000 -- (-2650.623) (-2511.847) [-2473.291] (-2493.525) * [-2468.772] (-2661.849) (-2511.996) (-2524.046) -- 0:36:38
110000 -- (-2646.943) (-2518.460) [-2464.475] (-2499.662) * [-2472.329] (-2678.115) (-2486.521) (-2516.719) -- 0:36:48
Average standard deviation of split frequencies: 0.042401
111000 -- (-2645.441) (-2517.028) [-2467.201] (-2478.020) * [-2472.222] (-2664.305) (-2468.769) (-2514.802) -- 0:36:58
112000 -- (-2642.900) (-2513.558) [-2471.133] (-2496.540) * (-2478.986) (-2662.792) [-2462.268] (-2513.621) -- 0:37:00
113000 -- (-2659.640) [-2495.504] (-2487.894) (-2500.003) * (-2496.458) (-2673.096) [-2462.456] (-2497.881) -- 0:37:09
114000 -- (-2666.690) (-2503.641) [-2499.739] (-2505.623) * (-2498.548) (-2661.126) [-2454.096] (-2491.342) -- 0:37:18
115000 -- (-2652.848) (-2509.747) (-2489.628) [-2477.254] * (-2492.450) (-2657.825) [-2459.359] (-2493.867) -- 0:37:27
Average standard deviation of split frequencies: 0.042180
116000 -- (-2642.109) (-2528.898) [-2488.519] (-2482.630) * (-2480.211) (-2646.084) [-2450.061] (-2513.381) -- 0:37:28
117000 -- (-2657.983) (-2530.937) (-2497.719) [-2491.800] * (-2499.584) (-2652.626) [-2459.399] (-2501.734) -- 0:37:36
118000 -- (-2652.263) (-2520.713) [-2487.110] (-2470.340) * (-2474.632) (-2649.585) [-2454.332] (-2480.482) -- 0:37:44
119000 -- (-2645.010) (-2520.269) (-2486.980) [-2450.927] * (-2496.808) (-2650.351) [-2468.304] (-2473.526) -- 0:37:52
120000 -- (-2668.283) (-2514.698) (-2509.473) [-2454.986] * (-2484.200) (-2664.746) [-2463.323] (-2471.476) -- 0:37:53
Average standard deviation of split frequencies: 0.041595
121000 -- (-2661.387) (-2499.488) (-2503.424) [-2454.907] * (-2474.230) (-2660.082) [-2459.415] (-2481.748) -- 0:38:01
122000 -- (-2669.672) (-2496.903) (-2498.514) [-2452.779] * (-2481.183) (-2647.424) [-2463.003] (-2471.266) -- 0:38:01
123000 -- (-2678.685) (-2495.578) (-2502.029) [-2456.053] * [-2469.737] (-2662.862) (-2472.492) (-2475.510) -- 0:38:08
124000 -- (-2655.946) (-2495.718) (-2489.270) [-2463.937] * (-2480.264) (-2663.487) [-2475.664] (-2468.264) -- 0:38:15
125000 -- (-2653.771) (-2484.397) [-2487.903] (-2462.526) * (-2483.640) (-2668.521) (-2468.527) [-2462.469] -- 0:38:16
Average standard deviation of split frequencies: 0.038286
126000 -- (-2660.485) (-2489.821) (-2485.370) [-2458.122] * (-2476.979) (-2667.061) [-2466.854] (-2471.402) -- 0:38:15
127000 -- (-2662.763) (-2498.260) (-2492.024) [-2454.681] * (-2467.131) (-2677.127) [-2461.024] (-2504.223) -- 0:38:15
128000 -- (-2650.653) (-2510.153) (-2489.363) [-2461.265] * [-2462.893] (-2670.483) (-2461.551) (-2502.534) -- 0:38:09
129000 -- (-2662.754) (-2498.399) (-2498.151) [-2470.391] * [-2469.523] (-2658.190) (-2462.304) (-2491.294) -- 0:38:02
130000 -- (-2670.243) (-2500.581) [-2474.620] (-2465.902) * [-2461.803] (-2664.319) (-2478.333) (-2495.238) -- 0:38:02
Average standard deviation of split frequencies: 0.037440
131000 -- (-2654.471) (-2502.178) [-2474.156] (-2475.865) * [-2445.152] (-2657.591) (-2477.368) (-2518.339) -- 0:37:55
132000 -- (-2665.050) (-2508.327) (-2465.714) [-2476.349] * [-2453.450] (-2665.796) (-2481.038) (-2505.571) -- 0:38:01
133000 -- (-2661.315) (-2491.159) [-2471.143] (-2484.015) * [-2461.210] (-2665.780) (-2492.122) (-2511.798) -- 0:38:08
134000 -- (-2680.974) (-2470.268) [-2479.475] (-2487.468) * [-2461.636] (-2673.499) (-2487.448) (-2511.310) -- 0:38:07
135000 -- (-2671.378) (-2486.377) [-2468.223] (-2473.268) * [-2463.722] (-2681.477) (-2470.971) (-2514.776) -- 0:38:13
Average standard deviation of split frequencies: 0.036415
136000 -- (-2663.165) (-2492.666) [-2467.821] (-2453.034) * [-2461.010] (-2676.374) (-2464.337) (-2499.425) -- 0:38:19
137000 -- (-2669.193) (-2490.643) (-2460.887) [-2465.670] * [-2465.913] (-2683.470) (-2481.830) (-2505.959) -- 0:38:25
138000 -- (-2673.702) (-2490.677) [-2479.951] (-2463.108) * [-2459.570] (-2686.741) (-2476.846) (-2490.927) -- 0:38:24
139000 -- (-2674.956) (-2495.829) (-2475.412) [-2469.784] * [-2462.538] (-2696.376) (-2494.512) (-2494.249) -- 0:38:30
140000 -- (-2672.218) (-2488.907) [-2476.831] (-2467.323) * [-2469.944] (-2703.387) (-2482.043) (-2505.389) -- 0:38:35
Average standard deviation of split frequencies: 0.035916
141000 -- (-2700.496) (-2482.149) (-2463.932) [-2451.191] * (-2498.995) (-2687.878) (-2482.177) [-2481.099] -- 0:38:41
142000 -- (-2669.327) (-2500.216) [-2472.494] (-2458.094) * (-2506.771) (-2681.465) [-2495.710] (-2488.997) -- 0:38:40
143000 -- (-2663.940) (-2511.624) (-2477.733) [-2469.652] * [-2478.020] (-2664.488) (-2491.701) (-2499.682) -- 0:38:45
144000 -- (-2681.547) (-2513.484) [-2476.533] (-2489.983) * [-2476.877] (-2670.451) (-2503.383) (-2496.649) -- 0:38:50
145000 -- (-2676.838) (-2492.990) [-2474.166] (-2484.549) * (-2482.371) (-2675.082) (-2506.097) [-2474.032] -- 0:38:49
Average standard deviation of split frequencies: 0.035341
146000 -- (-2660.379) (-2462.160) [-2457.066] (-2480.482) * (-2479.515) (-2666.300) (-2527.852) [-2475.022] -- 0:38:53
147000 -- (-2665.365) (-2466.948) [-2458.546] (-2457.736) * [-2470.584] (-2687.070) (-2516.283) (-2482.168) -- 0:38:58
148000 -- (-2670.906) [-2463.111] (-2456.359) (-2492.836) * (-2488.709) (-2668.770) (-2499.928) [-2486.871] -- 0:38:57
149000 -- (-2684.466) (-2468.024) [-2455.161] (-2497.902) * (-2503.319) (-2661.214) [-2489.800] (-2484.532) -- 0:39:01
150000 -- (-2673.091) [-2468.500] (-2475.403) (-2498.044) * (-2511.841) (-2655.598) [-2471.796] (-2471.724) -- 0:39:00
Average standard deviation of split frequencies: 0.033041
151000 -- (-2674.801) [-2470.276] (-2482.217) (-2515.339) * (-2509.159) (-2655.218) (-2486.164) [-2464.141] -- 0:39:04
152000 -- (-2688.837) [-2459.791] (-2484.768) (-2506.426) * (-2509.186) (-2635.373) [-2476.159] (-2466.526) -- 0:39:03
153000 -- (-2685.120) [-2463.027] (-2472.651) (-2500.722) * (-2524.669) (-2640.233) [-2457.002] (-2477.150) -- 0:39:07
154000 -- (-2666.136) (-2466.510) (-2489.529) [-2479.742] * (-2524.182) (-2645.098) [-2457.549] (-2493.890) -- 0:39:00
155000 -- (-2670.972) [-2473.731] (-2489.256) (-2488.711) * (-2520.737) (-2667.521) [-2463.645] (-2494.804) -- 0:38:58
Average standard deviation of split frequencies: 0.031763
156000 -- (-2663.287) [-2476.765] (-2475.510) (-2490.163) * (-2512.030) (-2652.397) [-2464.667] (-2488.711) -- 0:38:57
157000 -- (-2672.008) (-2486.118) (-2474.871) [-2468.491] * (-2508.064) (-2683.802) [-2492.360] (-2495.322) -- 0:38:55
158000 -- (-2667.645) (-2477.459) (-2473.624) [-2468.574] * (-2528.787) (-2658.903) (-2488.429) [-2475.398] -- 0:38:59
159000 -- (-2665.774) (-2482.987) (-2465.132) [-2460.805] * (-2523.602) (-2657.461) (-2497.552) [-2483.533] -- 0:38:57
160000 -- (-2666.455) (-2473.430) [-2471.254] (-2470.253) * (-2517.497) (-2658.524) (-2501.414) [-2495.248] -- 0:39:01
Average standard deviation of split frequencies: 0.029792
161000 -- (-2665.835) (-2490.406) (-2465.858) [-2458.825] * (-2520.554) (-2667.971) [-2483.980] (-2482.249) -- 0:38:59
162000 -- (-2682.771) (-2479.146) (-2469.324) [-2460.895] * (-2507.986) (-2650.256) (-2488.238) [-2473.355] -- 0:38:58
163000 -- (-2672.403) (-2491.471) (-2468.967) [-2446.947] * (-2534.073) (-2672.982) (-2493.611) [-2461.290] -- 0:38:56
164000 -- (-2685.612) (-2503.593) (-2466.315) [-2455.375] * (-2489.302) (-2657.979) [-2475.237] (-2471.922) -- 0:38:49
165000 -- (-2669.497) (-2507.730) (-2490.213) [-2455.911] * (-2499.625) (-2650.908) (-2479.026) [-2460.527] -- 0:38:42
Average standard deviation of split frequencies: 0.028206
166000 -- (-2661.468) (-2475.608) (-2477.094) [-2467.149] * (-2485.590) (-2652.952) (-2496.729) [-2460.463] -- 0:38:36
167000 -- (-2644.413) (-2492.632) [-2470.126] (-2464.588) * (-2475.047) (-2654.793) (-2477.297) [-2459.488] -- 0:38:34
168000 -- (-2659.625) (-2498.975) (-2487.857) [-2467.580] * [-2444.383] (-2679.214) (-2463.520) (-2469.212) -- 0:38:27
169000 -- (-2667.622) (-2489.182) (-2488.593) [-2462.129] * (-2455.664) (-2672.228) (-2481.122) [-2457.385] -- 0:38:26
170000 -- (-2669.635) (-2499.916) (-2483.021) [-2460.166] * (-2469.256) (-2651.868) (-2486.505) [-2448.798] -- 0:38:19
Average standard deviation of split frequencies: 0.027525
171000 -- (-2658.798) (-2496.244) (-2480.173) [-2467.868] * (-2470.136) (-2660.809) (-2495.701) [-2442.800] -- 0:38:17
172000 -- (-2664.011) (-2490.568) (-2492.926) [-2467.609] * (-2479.468) (-2658.302) (-2497.554) [-2457.017] -- 0:38:11
173000 -- (-2683.208) (-2508.200) (-2496.264) [-2460.313] * (-2482.687) (-2669.065) (-2480.301) [-2453.845] -- 0:38:09
174000 -- (-2657.139) (-2497.895) (-2482.290) [-2474.772] * (-2465.517) (-2654.763) (-2463.471) [-2458.127] -- 0:38:03
175000 -- (-2658.506) (-2496.474) [-2468.802] (-2472.747) * (-2462.885) (-2661.516) (-2468.590) [-2459.024] -- 0:37:57
Average standard deviation of split frequencies: 0.028155
176000 -- (-2650.746) (-2517.958) (-2467.661) [-2456.425] * [-2468.479] (-2664.515) (-2473.227) (-2453.473) -- 0:37:55
177000 -- (-2658.794) (-2510.586) (-2469.238) [-2463.509] * (-2482.579) (-2678.070) (-2474.225) [-2463.689] -- 0:37:49
178000 -- (-2663.569) (-2508.598) [-2470.731] (-2477.537) * (-2495.016) (-2678.753) [-2456.981] (-2468.688) -- 0:37:47
179000 -- (-2672.264) (-2511.970) [-2474.896] (-2470.265) * (-2480.885) (-2668.629) (-2473.892) [-2477.952] -- 0:37:50
180000 -- (-2677.689) (-2510.530) (-2472.079) [-2453.396] * (-2488.134) (-2667.833) (-2471.958) [-2475.233] -- 0:37:53
Average standard deviation of split frequencies: 0.028447
181000 -- (-2691.080) (-2472.563) (-2461.540) [-2461.391] * (-2503.415) (-2691.325) [-2484.877] (-2485.068) -- 0:37:51
182000 -- (-2689.399) (-2474.327) [-2455.923] (-2483.809) * [-2469.647] (-2692.505) (-2502.971) (-2486.206) -- 0:37:54
183000 -- (-2679.814) (-2482.344) [-2467.449] (-2486.112) * [-2473.938] (-2684.170) (-2498.709) (-2470.492) -- 0:37:52
184000 -- (-2702.550) (-2490.131) [-2461.479] (-2495.647) * (-2468.556) (-2692.427) (-2505.271) [-2468.847] -- 0:37:55
185000 -- (-2674.522) (-2491.167) [-2449.322] (-2494.567) * (-2479.553) (-2683.663) (-2505.803) [-2456.779] -- 0:37:53
Average standard deviation of split frequencies: 0.027704
186000 -- (-2653.673) (-2491.798) [-2463.587] (-2488.778) * (-2462.902) (-2679.486) (-2490.837) [-2459.476] -- 0:37:55
187000 -- (-2654.214) [-2467.073] (-2476.896) (-2489.957) * [-2463.566] (-2681.950) (-2509.376) (-2462.466) -- 0:37:58
188000 -- (-2667.151) [-2468.707] (-2475.363) (-2505.554) * (-2475.498) (-2681.942) (-2509.706) [-2462.938] -- 0:37:56
189000 -- (-2653.597) [-2466.023] (-2469.877) (-2507.195) * [-2471.165] (-2664.228) (-2514.976) (-2475.796) -- 0:37:58
190000 -- (-2676.024) (-2479.942) [-2459.543] (-2494.605) * (-2471.140) (-2663.271) (-2505.278) [-2476.372] -- 0:37:56
Average standard deviation of split frequencies: 0.030129
191000 -- (-2683.973) (-2494.636) [-2459.219] (-2494.120) * (-2472.286) (-2672.030) (-2505.156) [-2476.226] -- 0:37:58
192000 -- (-2683.428) (-2504.954) [-2461.208] (-2492.543) * [-2475.843] (-2662.307) (-2517.189) (-2466.816) -- 0:38:00
193000 -- (-2670.681) (-2502.868) [-2465.249] (-2495.191) * (-2475.161) (-2674.231) (-2500.553) [-2469.324] -- 0:37:58
194000 -- (-2663.292) (-2498.568) [-2469.244] (-2485.265) * [-2471.166] (-2678.382) (-2492.183) (-2487.490) -- 0:38:00
195000 -- (-2659.301) (-2512.132) [-2455.711] (-2482.769) * [-2470.908] (-2690.188) (-2492.285) (-2474.953) -- 0:37:58
Average standard deviation of split frequencies: 0.028971
196000 -- (-2670.228) (-2493.092) [-2448.014] (-2482.117) * (-2490.385) (-2693.108) [-2486.850] (-2472.695) -- 0:38:00
197000 -- (-2663.209) (-2496.189) [-2453.163] (-2478.568) * (-2466.267) (-2692.918) [-2477.398] (-2483.377) -- 0:38:02
198000 -- (-2662.633) (-2515.400) [-2452.143] (-2487.513) * [-2464.757] (-2692.987) (-2483.521) (-2480.215) -- 0:38:00
199000 -- (-2658.024) (-2530.405) [-2467.719] (-2495.329) * (-2477.609) (-2698.545) (-2507.090) [-2455.691] -- 0:38:02
200000 -- (-2663.896) (-2528.610) (-2482.290) [-2476.857] * (-2471.962) (-2682.255) (-2499.240) [-2451.912] -- 0:38:04
Average standard deviation of split frequencies: 0.027644
201000 -- (-2664.568) (-2506.778) (-2469.155) [-2471.905] * (-2471.004) (-2676.579) (-2494.378) [-2443.024] -- 0:38:01
202000 -- (-2675.168) (-2507.606) (-2475.371) [-2472.540] * [-2473.653] (-2659.047) (-2488.369) (-2460.513) -- 0:38:03
203000 -- (-2658.866) (-2514.082) (-2470.330) [-2475.079] * (-2464.633) (-2658.227) (-2502.646) [-2460.940] -- 0:38:04
204000 -- (-2666.778) (-2516.576) (-2461.968) [-2474.673] * (-2454.946) (-2652.411) (-2507.871) [-2493.520] -- 0:38:02
205000 -- (-2677.220) (-2504.307) [-2464.698] (-2463.061) * (-2461.639) (-2658.418) (-2519.497) [-2464.834] -- 0:38:04
Average standard deviation of split frequencies: 0.028007
206000 -- (-2683.535) (-2497.687) [-2461.848] (-2466.307) * [-2464.836] (-2661.868) (-2512.280) (-2464.982) -- 0:38:01
207000 -- (-2677.214) (-2504.606) [-2468.380] (-2479.363) * (-2465.544) (-2663.226) (-2486.344) [-2459.367] -- 0:38:03
208000 -- (-2650.271) (-2493.715) [-2467.109] (-2480.425) * (-2466.796) (-2658.679) (-2498.495) [-2475.360] -- 0:38:04
209000 -- (-2664.285) (-2484.250) [-2469.237] (-2483.811) * (-2453.323) (-2671.627) (-2509.324) [-2465.207] -- 0:38:02
210000 -- (-2662.960) (-2497.554) (-2463.862) [-2479.378] * (-2464.628) (-2656.579) (-2508.379) [-2457.080] -- 0:38:03
Average standard deviation of split frequencies: 0.026358
211000 -- (-2680.612) (-2494.537) [-2454.983] (-2479.805) * (-2476.455) (-2648.423) (-2503.031) [-2463.527] -- 0:38:04
212000 -- (-2665.852) (-2508.752) [-2472.801] (-2473.865) * (-2467.251) (-2657.665) (-2503.648) [-2443.434] -- 0:38:05
213000 -- (-2659.057) (-2481.430) [-2476.907] (-2477.950) * (-2482.435) (-2668.747) (-2503.088) [-2449.615] -- 0:38:03
214000 -- (-2651.741) (-2496.720) [-2461.583] (-2466.633) * (-2491.582) (-2677.447) (-2490.682) [-2465.864] -- 0:38:00
215000 -- (-2652.288) (-2477.678) (-2473.617) [-2462.708] * (-2503.801) (-2678.508) (-2473.775) [-2466.060] -- 0:37:54
Average standard deviation of split frequencies: 0.025161
216000 -- (-2665.309) (-2507.967) [-2477.002] (-2466.014) * (-2488.945) (-2670.978) (-2476.002) [-2470.260] -- 0:37:52
217000 -- (-2672.807) (-2490.567) (-2471.683) [-2467.824] * (-2505.736) (-2656.193) [-2475.060] (-2463.166) -- 0:37:49
218000 -- (-2656.363) (-2493.217) (-2472.612) [-2464.165] * (-2484.868) (-2655.620) (-2468.882) [-2469.794] -- 0:37:43
219000 -- (-2653.346) (-2492.382) (-2477.427) [-2470.510] * (-2491.547) (-2651.638) [-2458.511] (-2469.931) -- 0:37:40
220000 -- (-2668.906) (-2493.720) (-2472.173) [-2458.706] * (-2495.827) (-2653.270) [-2469.611] (-2488.080) -- 0:37:34
Average standard deviation of split frequencies: 0.023650
221000 -- (-2658.039) (-2495.967) (-2478.505) [-2457.580] * (-2492.423) (-2652.707) [-2458.398] (-2470.631) -- 0:37:32
222000 -- (-2665.110) (-2480.094) (-2508.528) [-2465.213] * (-2494.725) (-2643.381) [-2453.324] (-2461.484) -- 0:37:26
223000 -- (-2662.903) (-2475.553) (-2481.124) [-2467.760] * (-2480.358) (-2649.967) [-2457.062] (-2483.181) -- 0:37:23
224000 -- (-2678.154) (-2464.322) (-2492.851) [-2462.470] * (-2488.734) (-2660.778) [-2452.109] (-2484.809) -- 0:37:21
225000 -- (-2662.686) (-2485.934) (-2482.005) [-2455.120] * (-2475.945) (-2679.037) [-2460.091] (-2484.074) -- 0:37:15
Average standard deviation of split frequencies: 0.024035
226000 -- (-2667.546) (-2475.385) (-2483.925) [-2459.789] * [-2465.421] (-2662.987) (-2467.563) (-2489.302) -- 0:37:12
227000 -- (-2653.487) (-2476.053) (-2498.623) [-2459.203] * [-2466.885] (-2673.343) (-2460.725) (-2500.502) -- 0:37:10
228000 -- (-2665.853) (-2489.721) (-2505.912) [-2459.879] * (-2469.676) (-2673.967) (-2474.639) [-2479.494] -- 0:37:04
229000 -- (-2655.255) (-2482.574) (-2520.217) [-2458.761] * (-2465.839) (-2647.145) [-2467.423] (-2492.404) -- 0:37:02
230000 -- (-2658.456) (-2469.882) (-2516.611) [-2462.980] * [-2479.108] (-2652.967) (-2469.506) (-2500.191) -- 0:36:56
Average standard deviation of split frequencies: 0.024524
231000 -- (-2667.612) (-2478.535) (-2517.482) [-2480.332] * (-2478.555) (-2684.237) [-2466.795] (-2507.650) -- 0:36:57
232000 -- (-2674.922) (-2484.088) (-2512.484) [-2489.811] * (-2484.054) (-2691.651) [-2462.666] (-2491.232) -- 0:36:57
233000 -- (-2660.823) (-2494.969) (-2513.704) [-2475.041] * (-2499.985) (-2695.799) [-2461.522] (-2482.721) -- 0:36:55
234000 -- (-2659.080) (-2493.214) (-2509.692) [-2475.721] * (-2484.924) (-2682.495) [-2456.590] (-2473.083) -- 0:36:56
235000 -- (-2656.887) (-2492.083) (-2489.332) [-2470.701] * (-2498.030) (-2679.626) [-2456.945] (-2472.490) -- 0:36:56
Average standard deviation of split frequencies: 0.024063
236000 -- (-2669.363) (-2494.439) (-2486.210) [-2468.273] * (-2471.737) (-2662.745) [-2462.031] (-2481.962) -- 0:36:57
237000 -- (-2673.511) (-2480.039) [-2461.922] (-2475.988) * (-2475.868) (-2653.341) [-2456.968] (-2471.482) -- 0:36:58
238000 -- (-2648.817) [-2474.756] (-2479.128) (-2480.223) * (-2488.636) (-2674.844) (-2449.930) [-2457.497] -- 0:36:58
239000 -- (-2663.905) (-2475.395) [-2475.024] (-2467.821) * (-2494.337) (-2666.213) [-2477.208] (-2464.222) -- 0:36:56
240000 -- (-2677.360) (-2466.607) (-2469.769) [-2474.076] * (-2498.328) (-2663.471) [-2459.138] (-2462.136) -- 0:36:53
Average standard deviation of split frequencies: 0.023212
241000 -- (-2666.116) (-2462.553) (-2462.693) [-2470.508] * (-2492.458) (-2663.713) [-2448.975] (-2485.219) -- 0:36:47
242000 -- (-2676.478) [-2455.921] (-2460.302) (-2461.746) * (-2492.277) (-2661.634) [-2464.239] (-2478.580) -- 0:36:45
243000 -- (-2666.109) [-2464.671] (-2463.772) (-2461.707) * (-2484.472) (-2678.136) [-2456.451] (-2498.120) -- 0:36:42
244000 -- (-2649.545) (-2469.518) [-2467.036] (-2469.295) * (-2493.376) (-2669.288) [-2456.642] (-2504.269) -- 0:36:36
245000 -- (-2668.328) [-2468.111] (-2480.647) (-2475.225) * (-2473.782) (-2660.896) [-2459.909] (-2504.228) -- 0:36:34
Average standard deviation of split frequencies: 0.025614
246000 -- (-2696.938) [-2466.857] (-2479.723) (-2496.991) * [-2472.497] (-2663.436) (-2466.264) (-2514.729) -- 0:36:31
247000 -- (-2663.862) [-2472.765] (-2469.446) (-2505.616) * (-2488.135) (-2648.581) [-2468.333] (-2509.862) -- 0:36:25
248000 -- (-2655.133) [-2461.622] (-2482.193) (-2492.851) * (-2478.876) (-2659.315) [-2473.621] (-2519.774) -- 0:36:23
249000 -- (-2658.978) [-2464.021] (-2483.864) (-2493.590) * [-2459.930] (-2651.519) (-2467.723) (-2508.234) -- 0:36:20
250000 -- (-2667.419) [-2450.711] (-2474.488) (-2506.966) * (-2473.920) (-2658.489) [-2459.645] (-2503.948) -- 0:36:18
Average standard deviation of split frequencies: 0.025695
251000 -- (-2669.169) [-2450.310] (-2470.234) (-2505.931) * (-2459.763) (-2640.966) [-2448.410] (-2487.031) -- 0:36:15
252000 -- (-2682.567) (-2465.486) [-2461.237] (-2506.424) * [-2465.819] (-2659.795) (-2454.401) (-2488.442) -- 0:36:09
253000 -- (-2674.987) [-2466.569] (-2453.747) (-2492.530) * (-2490.594) (-2655.263) [-2449.281] (-2474.181) -- 0:36:07
254000 -- (-2689.556) [-2455.209] (-2465.063) (-2501.789) * (-2490.636) (-2671.333) [-2456.429] (-2475.661) -- 0:36:01
255000 -- (-2680.863) [-2459.743] (-2459.630) (-2485.021) * (-2481.337) (-2689.242) [-2454.335] (-2470.676) -- 0:35:59
Average standard deviation of split frequencies: 0.027860
256000 -- (-2669.115) [-2474.318] (-2473.494) (-2493.736) * (-2483.686) (-2668.319) [-2462.163] (-2467.550) -- 0:35:56
257000 -- (-2677.460) (-2490.783) [-2454.812] (-2482.496) * (-2483.837) (-2645.659) [-2467.314] (-2472.112) -- 0:35:50
258000 -- (-2694.554) (-2477.861) [-2466.511] (-2505.501) * (-2492.777) (-2655.041) (-2481.826) [-2474.895] -- 0:35:48
259000 -- (-2693.941) (-2470.851) [-2473.171] (-2495.261) * (-2480.905) (-2652.642) (-2491.490) [-2453.614] -- 0:35:42
260000 -- (-2686.362) [-2463.618] (-2472.631) (-2514.917) * (-2488.967) (-2653.140) (-2478.424) [-2467.955] -- 0:35:40
Average standard deviation of split frequencies: 0.027510
261000 -- (-2653.927) [-2480.880] (-2482.601) (-2509.699) * (-2494.439) (-2642.443) [-2468.109] (-2478.555) -- 0:35:37
262000 -- (-2666.083) [-2476.843] (-2478.841) (-2515.733) * (-2495.940) (-2651.445) (-2466.505) [-2483.048] -- 0:35:32
263000 -- (-2649.654) (-2465.707) [-2487.764] (-2502.140) * (-2484.827) (-2643.039) [-2462.793] (-2477.608) -- 0:35:29
264000 -- (-2677.206) [-2456.044] (-2477.203) (-2499.643) * [-2480.552] (-2651.487) (-2466.542) (-2475.584) -- 0:35:24
265000 -- (-2660.688) (-2467.131) [-2476.909] (-2515.115) * (-2487.246) (-2643.636) [-2467.696] (-2489.331) -- 0:35:21
Average standard deviation of split frequencies: 0.026933
266000 -- (-2665.330) [-2466.593] (-2475.099) (-2507.545) * [-2496.357] (-2641.586) (-2479.375) (-2502.841) -- 0:35:16
267000 -- (-2672.610) [-2462.282] (-2476.524) (-2509.114) * (-2497.336) (-2657.364) [-2456.897] (-2486.371) -- 0:35:13
268000 -- (-2671.406) (-2485.218) [-2478.579] (-2506.973) * (-2479.691) (-2660.013) [-2446.115] (-2494.661) -- 0:35:08
269000 -- (-2660.509) [-2467.128] (-2490.470) (-2500.753) * (-2478.033) (-2657.107) [-2452.064] (-2493.208) -- 0:35:06
270000 -- (-2650.712) [-2470.909] (-2484.992) (-2502.274) * (-2490.028) (-2690.564) [-2443.713] (-2488.313) -- 0:35:00
Average standard deviation of split frequencies: 0.027826
271000 -- (-2655.938) (-2479.239) [-2472.194] (-2516.465) * [-2473.788] (-2665.440) (-2448.078) (-2510.039) -- 0:34:58
272000 -- (-2641.430) [-2484.627] (-2494.187) (-2521.791) * (-2469.542) (-2666.386) [-2452.356] (-2521.075) -- 0:34:55
273000 -- (-2648.178) (-2489.440) [-2472.871] (-2510.566) * (-2476.875) (-2679.304) [-2453.539] (-2518.205) -- 0:34:50
274000 -- (-2658.108) (-2487.619) [-2464.302] (-2500.591) * (-2473.453) (-2674.310) [-2450.370] (-2507.602) -- 0:34:47
275000 -- (-2670.492) (-2498.617) [-2473.692] (-2504.614) * [-2458.824] (-2688.874) (-2463.731) (-2487.079) -- 0:34:42
Average standard deviation of split frequencies: 0.026876
276000 -- (-2683.772) (-2476.406) [-2459.925] (-2493.492) * (-2470.076) (-2669.191) [-2454.573] (-2498.144) -- 0:34:40
277000 -- (-2681.078) (-2489.054) [-2462.747] (-2500.132) * (-2487.726) (-2665.141) [-2448.812] (-2489.515) -- 0:34:37
278000 -- (-2677.809) (-2478.183) [-2468.542] (-2491.499) * (-2482.708) (-2660.851) [-2452.134] (-2497.581) -- 0:34:32
279000 -- (-2669.176) (-2505.522) [-2469.216] (-2479.691) * (-2482.285) (-2663.691) (-2452.283) [-2482.078] -- 0:34:29
280000 -- (-2663.944) (-2486.968) [-2460.804] (-2489.194) * [-2462.736] (-2669.262) (-2457.053) (-2476.758) -- 0:34:24
Average standard deviation of split frequencies: 0.026530
281000 -- (-2663.169) (-2497.660) [-2463.885] (-2486.892) * (-2468.138) (-2656.047) [-2457.883] (-2487.733) -- 0:34:22
282000 -- (-2667.458) (-2497.386) (-2472.917) [-2465.464] * (-2474.185) (-2660.996) [-2465.140] (-2480.971) -- 0:34:17
283000 -- (-2660.090) (-2481.066) [-2452.958] (-2456.585) * (-2475.746) (-2654.646) [-2450.433] (-2488.690) -- 0:34:14
284000 -- (-2661.352) (-2494.569) [-2469.379] (-2476.241) * (-2480.094) (-2673.319) [-2449.816] (-2486.447) -- 0:34:09
285000 -- (-2674.723) (-2484.491) (-2479.747) [-2482.290] * (-2470.218) (-2688.876) [-2460.433] (-2492.522) -- 0:34:07
Average standard deviation of split frequencies: 0.026635
286000 -- (-2678.873) (-2488.339) [-2460.892] (-2484.084) * (-2468.888) (-2689.207) [-2464.864] (-2507.610) -- 0:34:07
287000 -- (-2667.478) (-2492.795) (-2491.670) [-2472.504] * (-2479.758) (-2673.434) [-2468.637] (-2509.354) -- 0:34:04
288000 -- (-2682.743) (-2484.427) (-2501.441) [-2476.596] * (-2471.511) (-2666.561) [-2468.665] (-2488.348) -- 0:34:04
289000 -- (-2677.839) (-2504.232) (-2499.107) [-2468.099] * [-2477.524] (-2664.407) (-2478.349) (-2474.246) -- 0:33:59
290000 -- (-2672.122) (-2486.361) [-2482.889] (-2498.588) * [-2466.535] (-2667.061) (-2463.391) (-2482.272) -- 0:33:54
Average standard deviation of split frequencies: 0.026911
291000 -- (-2666.930) (-2491.003) [-2482.762] (-2495.689) * [-2458.182] (-2677.138) (-2468.094) (-2507.303) -- 0:33:51
292000 -- (-2667.263) (-2489.657) [-2471.606] (-2487.288) * [-2454.458] (-2674.532) (-2479.739) (-2511.539) -- 0:33:47
293000 -- (-2674.552) (-2470.188) (-2477.667) [-2467.871] * [-2466.112] (-2676.487) (-2469.419) (-2522.002) -- 0:33:42
294000 -- (-2671.245) [-2462.208] (-2466.674) (-2466.376) * [-2459.291] (-2688.845) (-2472.119) (-2514.624) -- 0:33:39
295000 -- (-2663.100) [-2467.408] (-2479.145) (-2459.207) * (-2467.953) (-2669.521) [-2464.457] (-2494.960) -- 0:33:34
Average standard deviation of split frequencies: 0.025861
296000 -- (-2655.081) (-2467.471) (-2481.991) [-2449.771] * (-2471.812) (-2679.589) [-2453.346] (-2486.959) -- 0:33:32
297000 -- (-2654.613) [-2460.972] (-2485.390) (-2463.637) * (-2472.991) (-2662.602) [-2465.441] (-2476.844) -- 0:33:27
298000 -- (-2650.998) (-2478.513) (-2467.437) [-2461.916] * (-2482.564) (-2668.279) (-2483.101) [-2457.938] -- 0:33:24
299000 -- (-2661.774) (-2500.644) (-2470.696) [-2458.864] * (-2466.974) (-2681.290) (-2478.641) [-2465.985] -- 0:33:19
300000 -- (-2669.390) (-2506.114) (-2482.230) [-2472.729] * (-2476.623) (-2664.076) (-2485.940) [-2459.101] -- 0:33:17
Average standard deviation of split frequencies: 0.025049
301000 -- (-2674.800) (-2492.070) (-2491.967) [-2459.220] * (-2456.477) (-2672.277) (-2494.258) [-2466.972] -- 0:33:12
302000 -- (-2666.568) (-2504.963) (-2476.498) [-2470.425] * [-2472.783] (-2675.746) (-2491.454) (-2473.967) -- 0:33:09
303000 -- (-2675.372) (-2476.515) (-2481.445) [-2460.009] * [-2460.127] (-2684.694) (-2497.668) (-2471.586) -- 0:33:05
304000 -- (-2659.498) (-2511.402) (-2482.534) [-2455.834] * (-2466.742) (-2697.652) [-2479.946] (-2494.079) -- 0:33:02
305000 -- (-2687.345) (-2486.975) (-2482.443) [-2465.300] * [-2470.630] (-2681.422) (-2492.229) (-2501.636) -- 0:33:00
Average standard deviation of split frequencies: 0.024790
306000 -- (-2654.935) (-2480.702) [-2473.571] (-2478.022) * [-2472.390] (-2678.908) (-2468.493) (-2497.665) -- 0:32:55
307000 -- (-2654.681) [-2467.316] (-2476.374) (-2477.694) * [-2465.907] (-2676.674) (-2463.037) (-2485.871) -- 0:32:52
308000 -- (-2657.593) (-2471.715) [-2468.117] (-2470.109) * [-2460.386] (-2675.534) (-2462.088) (-2485.841) -- 0:32:48
309000 -- (-2662.570) (-2474.614) (-2469.803) [-2467.248] * (-2463.687) (-2676.239) [-2456.479] (-2500.146) -- 0:32:45
310000 -- (-2653.266) (-2481.079) (-2487.307) [-2471.610] * [-2478.367] (-2677.835) (-2482.679) (-2513.574) -- 0:32:40
Average standard deviation of split frequencies: 0.024069
311000 -- (-2650.737) [-2467.202] (-2474.578) (-2475.008) * (-2466.633) (-2681.699) [-2478.523] (-2495.040) -- 0:32:38
312000 -- (-2649.804) (-2485.082) [-2466.829] (-2485.857) * [-2478.678] (-2674.833) (-2474.462) (-2502.534) -- 0:32:33
313000 -- (-2658.968) (-2490.761) [-2461.426] (-2477.708) * [-2458.536] (-2667.283) (-2476.532) (-2502.430) -- 0:32:31
314000 -- (-2667.231) (-2483.078) [-2454.465] (-2484.776) * [-2477.049] (-2672.599) (-2472.563) (-2503.009) -- 0:32:26
315000 -- (-2653.994) (-2480.991) [-2467.564] (-2482.929) * (-2490.549) (-2656.802) [-2470.214] (-2488.626) -- 0:32:24
Average standard deviation of split frequencies: 0.024417
316000 -- (-2654.314) (-2463.730) [-2454.384] (-2496.194) * (-2492.306) (-2670.467) [-2468.142] (-2486.555) -- 0:32:19
317000 -- (-2668.546) (-2464.878) [-2447.563] (-2497.057) * (-2487.301) (-2680.479) [-2461.731] (-2488.287) -- 0:32:16
318000 -- (-2656.647) (-2468.837) [-2452.433] (-2476.477) * (-2491.466) (-2694.487) [-2464.044] (-2510.385) -- 0:32:12
319000 -- (-2660.223) (-2467.625) [-2460.162] (-2487.112) * (-2494.368) (-2700.342) [-2476.209] (-2501.738) -- 0:32:09
320000 -- (-2652.031) (-2473.494) [-2452.567] (-2495.493) * (-2505.258) (-2685.665) [-2460.313] (-2500.757) -- 0:32:07
Average standard deviation of split frequencies: 0.024581
321000 -- (-2653.663) (-2491.293) [-2471.956] (-2493.332) * (-2501.388) (-2686.588) [-2460.435] (-2495.779) -- 0:32:02
322000 -- (-2652.320) (-2492.204) [-2472.294] (-2495.458) * (-2512.610) (-2690.892) [-2461.218] (-2501.286) -- 0:32:00
323000 -- (-2651.390) (-2473.524) [-2463.463] (-2488.443) * (-2511.311) (-2686.600) [-2462.884] (-2513.512) -- 0:31:57
324000 -- (-2662.300) [-2473.402] (-2476.072) (-2488.297) * (-2494.390) (-2678.747) [-2459.605] (-2479.788) -- 0:31:53
325000 -- (-2653.662) (-2475.337) (-2481.145) [-2475.486] * [-2473.753] (-2685.013) (-2450.343) (-2494.128) -- 0:31:50
Average standard deviation of split frequencies: 0.024001
326000 -- (-2659.403) [-2489.767] (-2488.285) (-2486.292) * (-2486.496) (-2684.637) [-2458.788] (-2501.439) -- 0:31:48
327000 -- (-2657.598) (-2495.502) [-2472.514] (-2481.284) * (-2483.781) (-2685.291) [-2465.828] (-2495.993) -- 0:31:43
328000 -- (-2678.704) (-2527.291) [-2469.392] (-2479.847) * (-2489.336) (-2677.828) [-2465.666] (-2482.682) -- 0:31:41
329000 -- (-2668.497) (-2494.544) [-2461.999] (-2493.367) * (-2512.137) (-2685.177) [-2473.417] (-2470.030) -- 0:31:36
330000 -- (-2664.040) (-2481.342) [-2445.773] (-2486.225) * (-2497.908) (-2678.295) [-2472.060] (-2478.833) -- 0:31:34
Average standard deviation of split frequencies: 0.023138
331000 -- (-2677.247) (-2489.158) [-2447.421] (-2507.765) * (-2495.975) (-2677.032) [-2462.883] (-2484.228) -- 0:31:29
332000 -- (-2656.292) (-2487.325) [-2464.663] (-2510.404) * (-2506.476) (-2683.331) [-2471.107] (-2467.787) -- 0:31:27
333000 -- (-2661.494) (-2508.290) [-2448.676] (-2479.291) * (-2522.251) (-2662.655) [-2453.789] (-2474.477) -- 0:31:22
334000 -- (-2668.727) (-2498.142) [-2450.187] (-2484.286) * (-2505.627) (-2664.330) [-2457.434] (-2485.350) -- 0:31:20
335000 -- (-2649.188) (-2498.398) [-2445.380] (-2503.465) * (-2500.142) (-2660.288) [-2463.564] (-2488.572) -- 0:31:15
Average standard deviation of split frequencies: 0.022910
336000 -- (-2657.746) (-2497.041) [-2441.686] (-2484.073) * (-2487.475) (-2671.457) [-2458.803] (-2465.300) -- 0:31:13
337000 -- (-2648.049) (-2515.479) [-2439.046] (-2477.899) * (-2475.448) (-2658.386) [-2463.519] (-2481.949) -- 0:31:08
338000 -- (-2661.163) (-2514.508) [-2446.415] (-2478.950) * (-2490.190) (-2670.976) [-2463.499] (-2487.334) -- 0:31:06
339000 -- (-2641.221) (-2512.531) [-2463.471] (-2493.613) * (-2499.545) (-2666.806) [-2458.392] (-2483.966) -- 0:31:04
340000 -- (-2658.949) (-2507.050) [-2466.377] (-2484.611) * (-2497.893) (-2660.433) (-2460.706) [-2469.150] -- 0:30:59
Average standard deviation of split frequencies: 0.022531
341000 -- (-2656.660) (-2513.269) (-2487.088) [-2470.016] * (-2495.069) (-2668.721) [-2479.028] (-2485.480) -- 0:30:57
342000 -- (-2671.870) (-2499.447) (-2487.715) [-2469.620] * (-2498.258) (-2658.290) [-2459.097] (-2471.834) -- 0:30:52
343000 -- (-2655.850) (-2502.099) (-2475.357) [-2473.151] * (-2494.472) (-2658.503) [-2469.465] (-2476.020) -- 0:30:48
344000 -- (-2664.400) (-2507.444) (-2487.535) [-2470.959] * (-2488.159) (-2663.825) [-2457.739] (-2488.086) -- 0:30:45
345000 -- (-2659.220) (-2489.366) (-2492.395) [-2481.172] * (-2481.316) (-2668.617) (-2453.630) [-2467.983] -- 0:30:41
Average standard deviation of split frequencies: 0.022132
346000 -- (-2648.980) (-2523.413) (-2481.585) [-2477.676] * (-2494.232) (-2669.307) [-2460.751] (-2472.303) -- 0:30:39
347000 -- (-2655.907) (-2503.226) [-2483.663] (-2480.936) * (-2484.455) (-2658.327) (-2473.243) [-2474.416] -- 0:30:34
348000 -- (-2660.974) (-2469.252) (-2465.655) [-2467.437] * (-2471.283) (-2661.901) (-2466.111) [-2476.917] -- 0:30:32
349000 -- (-2661.328) (-2474.832) (-2495.304) [-2466.651] * (-2483.365) (-2674.466) [-2448.398] (-2480.383) -- 0:30:28
350000 -- (-2663.533) (-2473.137) [-2470.310] (-2471.873) * (-2478.298) (-2651.243) [-2469.568] (-2481.846) -- 0:30:25
Average standard deviation of split frequencies: 0.020901
351000 -- (-2681.608) [-2483.200] (-2489.344) (-2484.130) * (-2477.773) (-2676.007) [-2468.084] (-2488.140) -- 0:30:23
352000 -- (-2679.930) (-2483.099) (-2496.652) [-2482.298] * (-2472.791) (-2685.894) [-2456.757] (-2479.338) -- 0:30:18
353000 -- (-2668.869) (-2490.473) [-2472.227] (-2473.170) * (-2488.610) (-2689.354) (-2477.680) [-2461.776] -- 0:30:16
354000 -- (-2673.934) (-2508.011) (-2469.874) [-2487.251] * (-2485.577) (-2693.449) [-2474.776] (-2482.277) -- 0:30:12
355000 -- (-2673.515) (-2495.196) [-2467.718] (-2488.629) * (-2488.408) (-2699.186) [-2472.444] (-2483.736) -- 0:30:07
Average standard deviation of split frequencies: 0.021105
356000 -- (-2659.410) [-2468.974] (-2470.119) (-2476.254) * (-2496.309) (-2693.989) (-2469.061) [-2466.677] -- 0:30:05
357000 -- (-2646.453) (-2466.846) [-2448.440] (-2482.214) * (-2494.887) (-2672.997) [-2465.017] (-2485.992) -- 0:30:01
358000 -- (-2645.306) (-2470.035) [-2462.922] (-2474.286) * (-2489.204) (-2677.641) [-2461.913] (-2497.639) -- 0:29:56
359000 -- (-2629.968) [-2464.078] (-2464.829) (-2491.254) * (-2484.256) (-2670.177) [-2456.277] (-2485.234) -- 0:29:54
360000 -- (-2646.675) [-2453.843] (-2495.600) (-2496.722) * (-2481.809) (-2684.653) [-2458.438] (-2488.273) -- 0:29:50
Average standard deviation of split frequencies: 0.021606
361000 -- (-2636.609) [-2467.659] (-2490.828) (-2524.783) * (-2507.383) (-2677.107) [-2460.123] (-2482.281) -- 0:29:46
362000 -- (-2652.281) [-2463.899] (-2501.107) (-2523.398) * (-2499.544) (-2667.100) [-2464.939] (-2484.204) -- 0:29:43
363000 -- (-2661.465) [-2447.519] (-2491.520) (-2510.776) * (-2499.902) (-2675.236) (-2457.741) [-2482.164] -- 0:29:39
364000 -- (-2666.617) [-2451.229] (-2472.547) (-2504.123) * (-2492.178) (-2670.357) [-2461.876] (-2487.207) -- 0:29:35
365000 -- (-2655.596) [-2446.253] (-2470.320) (-2518.551) * (-2490.609) (-2671.208) [-2454.086] (-2498.180) -- 0:29:32
Average standard deviation of split frequencies: 0.021221
366000 -- (-2631.987) [-2450.638] (-2485.485) (-2512.244) * (-2495.845) (-2678.868) [-2466.124] (-2501.452) -- 0:29:28
367000 -- (-2641.389) [-2459.302] (-2478.580) (-2503.433) * (-2473.429) (-2681.559) [-2470.916] (-2505.386) -- 0:29:26
368000 -- (-2631.013) (-2466.425) [-2466.700] (-2504.203) * (-2475.410) (-2685.281) [-2461.060] (-2501.637) -- 0:29:22
369000 -- (-2662.683) (-2461.873) [-2466.860] (-2495.695) * [-2479.774] (-2685.203) (-2457.425) (-2500.104) -- 0:29:19
370000 -- (-2669.377) (-2476.272) [-2471.933] (-2498.273) * (-2472.418) (-2673.977) [-2470.991] (-2500.753) -- 0:29:15
Average standard deviation of split frequencies: 0.021605
371000 -- (-2665.277) [-2462.968] (-2477.326) (-2495.957) * [-2459.618] (-2667.184) (-2474.521) (-2509.765) -- 0:29:13
372000 -- (-2669.009) [-2477.423] (-2465.796) (-2495.722) * [-2452.984] (-2680.058) (-2493.361) (-2505.489) -- 0:29:08
373000 -- (-2671.769) [-2457.900] (-2480.406) (-2487.009) * (-2466.221) (-2686.003) [-2479.690] (-2505.784) -- 0:29:06
374000 -- (-2663.694) [-2462.006] (-2488.269) (-2493.924) * [-2459.965] (-2683.193) (-2491.193) (-2494.153) -- 0:29:02
375000 -- (-2666.253) (-2465.000) [-2483.675] (-2498.565) * [-2462.550] (-2679.854) (-2499.106) (-2491.047) -- 0:29:00
Average standard deviation of split frequencies: 0.022207
376000 -- (-2653.390) [-2462.858] (-2485.555) (-2503.046) * [-2461.690] (-2673.895) (-2509.383) (-2500.443) -- 0:28:55
377000 -- (-2654.942) [-2469.635] (-2473.139) (-2493.169) * [-2462.103] (-2690.208) (-2497.018) (-2493.034) -- 0:28:53
378000 -- (-2643.704) [-2476.165] (-2488.453) (-2488.969) * (-2477.824) (-2668.552) [-2487.672] (-2511.909) -- 0:28:49
379000 -- (-2648.497) (-2486.123) [-2469.215] (-2501.623) * [-2469.216] (-2672.372) (-2491.339) (-2505.480) -- 0:28:47
380000 -- (-2636.198) (-2508.419) [-2467.865] (-2486.696) * (-2470.194) (-2666.380) [-2479.128] (-2494.469) -- 0:28:44
Average standard deviation of split frequencies: 0.022037
381000 -- (-2651.322) (-2520.127) [-2461.733] (-2485.468) * [-2479.770] (-2684.030) (-2490.343) (-2486.128) -- 0:28:40
382000 -- (-2655.111) (-2498.385) (-2476.561) [-2476.001] * [-2476.414] (-2677.366) (-2510.100) (-2494.647) -- 0:28:38
383000 -- (-2648.181) (-2489.244) (-2466.197) [-2470.679] * (-2473.941) (-2675.579) [-2487.506] (-2530.161) -- 0:28:34
384000 -- (-2650.280) (-2537.087) [-2478.289] (-2474.753) * [-2462.851] (-2663.092) (-2475.342) (-2510.122) -- 0:28:31
385000 -- (-2675.472) (-2510.076) [-2472.038] (-2491.648) * [-2467.091] (-2674.292) (-2476.157) (-2498.977) -- 0:28:29
Average standard deviation of split frequencies: 0.023005
386000 -- (-2667.489) (-2506.949) [-2454.388] (-2474.145) * [-2455.284] (-2674.882) (-2469.867) (-2517.492) -- 0:28:25
387000 -- (-2676.672) (-2508.122) (-2456.645) [-2466.826] * [-2460.439] (-2672.508) (-2497.708) (-2479.024) -- 0:28:22
388000 -- (-2663.429) (-2502.943) [-2447.979] (-2480.258) * [-2465.003] (-2656.223) (-2497.232) (-2490.687) -- 0:28:18
389000 -- (-2656.466) (-2491.708) [-2444.589] (-2469.019) * [-2471.057] (-2660.798) (-2487.725) (-2466.127) -- 0:28:16
390000 -- (-2668.070) (-2497.982) [-2454.694] (-2466.819) * (-2473.213) (-2668.162) (-2488.792) [-2469.186] -- 0:28:12
Average standard deviation of split frequencies: 0.024299
391000 -- (-2679.766) (-2500.503) [-2456.747] (-2472.925) * (-2473.710) (-2668.750) (-2499.288) [-2473.951] -- 0:28:09
392000 -- (-2659.793) (-2519.854) (-2451.591) [-2450.977] * [-2473.894] (-2664.160) (-2489.902) (-2483.768) -- 0:28:07
393000 -- (-2664.516) (-2510.222) (-2459.346) [-2458.867] * (-2481.674) (-2677.426) (-2488.589) [-2478.740] -- 0:28:03
394000 -- (-2670.585) (-2506.424) [-2439.983] (-2465.592) * (-2480.080) (-2663.951) (-2472.853) [-2461.399] -- 0:28:01
395000 -- (-2665.468) (-2483.273) [-2467.753] (-2465.680) * [-2471.184] (-2665.489) (-2496.299) (-2453.681) -- 0:27:58
Average standard deviation of split frequencies: 0.025014
396000 -- (-2669.371) (-2476.271) [-2461.227] (-2470.221) * (-2484.354) (-2666.311) (-2489.493) [-2456.510] -- 0:27:54
397000 -- (-2685.128) (-2485.904) [-2457.775] (-2463.327) * [-2477.423] (-2656.748) (-2499.488) (-2471.374) -- 0:27:50
398000 -- (-2666.480) (-2499.951) [-2451.907] (-2473.107) * (-2479.629) (-2642.994) (-2513.577) [-2461.010] -- 0:27:48
399000 -- (-2690.133) (-2497.607) [-2449.453] (-2474.209) * (-2489.434) (-2668.838) (-2494.373) [-2459.449] -- 0:27:45
400000 -- (-2674.253) (-2481.651) [-2465.856] (-2471.816) * (-2483.514) (-2652.631) [-2487.086] (-2462.101) -- 0:27:42
Average standard deviation of split frequencies: 0.024380
401000 -- (-2653.719) (-2471.554) [-2452.624] (-2479.877) * (-2499.921) (-2653.965) (-2501.084) [-2465.617] -- 0:27:39
402000 -- (-2664.691) (-2474.018) [-2455.095] (-2491.697) * (-2496.027) (-2656.052) (-2498.711) [-2453.804] -- 0:27:35
403000 -- (-2675.299) [-2460.784] (-2457.007) (-2487.648) * (-2492.389) (-2654.959) (-2519.177) [-2452.889] -- 0:27:33
404000 -- (-2649.252) (-2451.443) [-2451.208] (-2490.140) * (-2496.886) (-2644.748) (-2492.457) [-2444.285] -- 0:27:30
405000 -- (-2645.819) [-2480.281] (-2461.138) (-2497.348) * (-2521.480) (-2651.810) (-2472.489) [-2458.914] -- 0:27:28
Average standard deviation of split frequencies: 0.024154
406000 -- (-2654.599) (-2494.827) [-2465.730] (-2483.597) * (-2511.104) (-2648.496) (-2472.937) [-2457.444] -- 0:27:27
407000 -- (-2647.951) (-2500.201) (-2502.358) [-2453.504] * (-2506.672) (-2641.412) (-2478.336) [-2456.249] -- 0:27:24
408000 -- (-2693.416) (-2496.702) (-2484.746) [-2457.867] * (-2489.725) (-2639.959) [-2470.863] (-2454.752) -- 0:27:23
409000 -- (-2685.243) (-2485.480) (-2484.353) [-2463.102] * (-2495.085) (-2662.410) [-2465.028] (-2456.522) -- 0:27:22
410000 -- (-2680.712) (-2487.581) (-2482.603) [-2466.898] * (-2494.890) (-2660.546) [-2464.267] (-2470.446) -- 0:27:19
Average standard deviation of split frequencies: 0.023489
411000 -- (-2668.160) (-2484.088) (-2465.856) [-2463.854] * (-2486.963) (-2661.784) (-2469.161) [-2452.536] -- 0:27:16
412000 -- (-2678.855) (-2506.799) (-2474.711) [-2474.011] * (-2492.382) (-2665.059) [-2467.146] (-2479.390) -- 0:27:14
413000 -- (-2679.608) (-2493.613) (-2493.942) [-2479.966] * (-2506.897) (-2670.567) [-2469.784] (-2485.613) -- 0:27:10
414000 -- (-2682.853) [-2471.869] (-2465.797) (-2486.286) * (-2515.975) (-2656.082) [-2468.144] (-2483.992) -- 0:27:07
415000 -- (-2658.822) (-2472.449) [-2471.556] (-2488.335) * (-2513.806) (-2664.650) [-2478.459] (-2467.977) -- 0:27:05
Average standard deviation of split frequencies: 0.022119
416000 -- (-2647.513) [-2463.355] (-2478.955) (-2479.179) * (-2505.498) (-2647.749) (-2476.852) [-2468.348] -- 0:27:04
417000 -- (-2660.587) [-2473.170] (-2490.796) (-2483.735) * (-2491.060) (-2662.565) (-2489.733) [-2464.960] -- 0:27:03
418000 -- (-2661.342) [-2463.762] (-2488.727) (-2496.227) * (-2504.057) (-2653.499) (-2482.179) [-2453.840] -- 0:27:02
419000 -- (-2663.205) [-2463.811] (-2489.114) (-2491.210) * (-2505.725) (-2630.894) (-2491.916) [-2453.062] -- 0:27:00
420000 -- (-2640.257) [-2469.311] (-2475.866) (-2486.200) * (-2495.035) (-2630.081) (-2483.142) [-2463.995] -- 0:26:58
Average standard deviation of split frequencies: 0.021845
421000 -- (-2650.674) [-2472.667] (-2475.385) (-2495.638) * (-2483.451) (-2667.886) (-2476.613) [-2465.970] -- 0:26:57
422000 -- (-2663.153) [-2460.643] (-2454.713) (-2490.341) * (-2477.587) (-2658.604) (-2492.451) [-2472.746] -- 0:26:56
423000 -- (-2663.964) [-2459.417] (-2459.698) (-2491.514) * [-2476.947] (-2654.033) (-2489.357) (-2470.984) -- 0:26:55
424000 -- (-2660.858) [-2459.661] (-2476.814) (-2489.871) * [-2475.133] (-2661.001) (-2501.026) (-2478.233) -- 0:26:53
425000 -- (-2662.165) [-2459.448] (-2483.505) (-2512.839) * [-2473.999] (-2664.301) (-2505.165) (-2466.007) -- 0:26:52
Average standard deviation of split frequencies: 0.021389
426000 -- (-2672.230) [-2471.789] (-2483.474) (-2501.211) * [-2471.939] (-2645.848) (-2482.228) (-2487.610) -- 0:26:50
427000 -- (-2690.931) (-2459.044) [-2465.625] (-2488.122) * (-2476.767) (-2645.347) (-2471.463) [-2457.683] -- 0:26:48
428000 -- (-2676.961) [-2457.388] (-2469.425) (-2502.438) * (-2477.372) (-2657.147) (-2484.929) [-2459.241] -- 0:26:47
429000 -- (-2657.888) [-2448.332] (-2474.307) (-2507.475) * [-2462.368] (-2645.071) (-2484.453) (-2478.057) -- 0:26:46
430000 -- (-2670.014) [-2459.734] (-2468.216) (-2514.399) * [-2460.191] (-2670.535) (-2498.904) (-2481.880) -- 0:26:45
Average standard deviation of split frequencies: 0.021057
431000 -- (-2666.241) (-2471.767) [-2466.671] (-2520.390) * [-2466.413] (-2677.268) (-2480.782) (-2470.503) -- 0:26:44
432000 -- (-2676.332) (-2474.379) [-2470.565] (-2496.663) * [-2461.004] (-2669.669) (-2496.922) (-2474.831) -- 0:26:41
433000 -- (-2668.177) (-2459.248) (-2489.752) [-2461.570] * [-2469.410] (-2657.015) (-2504.624) (-2469.046) -- 0:26:40
434000 -- (-2663.118) [-2467.309] (-2483.841) (-2491.012) * (-2479.598) (-2658.518) (-2504.634) [-2472.913] -- 0:26:38
435000 -- (-2646.065) [-2445.620] (-2491.765) (-2488.817) * [-2474.152] (-2666.912) (-2508.102) (-2474.989) -- 0:26:36
Average standard deviation of split frequencies: 0.020970
436000 -- (-2653.014) [-2444.988] (-2494.387) (-2489.155) * [-2464.132] (-2668.669) (-2497.456) (-2478.752) -- 0:26:33
437000 -- (-2682.575) [-2445.609] (-2513.192) (-2473.071) * [-2457.331] (-2668.209) (-2521.315) (-2480.653) -- 0:26:31
438000 -- (-2695.671) [-2453.247] (-2506.802) (-2481.302) * [-2468.635] (-2676.736) (-2479.606) (-2479.120) -- 0:26:27
439000 -- (-2710.530) [-2460.256] (-2481.064) (-2467.198) * [-2458.390] (-2661.195) (-2498.703) (-2485.395) -- 0:26:24
440000 -- (-2692.422) [-2459.922] (-2488.581) (-2482.366) * [-2460.445] (-2654.060) (-2486.152) (-2491.252) -- 0:26:20
Average standard deviation of split frequencies: 0.021356
441000 -- (-2696.358) [-2472.571] (-2488.548) (-2488.645) * [-2457.689] (-2652.156) (-2488.101) (-2479.552) -- 0:26:18
442000 -- (-2699.533) [-2480.407] (-2492.280) (-2476.108) * [-2468.518] (-2637.160) (-2519.534) (-2485.284) -- 0:26:15
443000 -- (-2688.800) (-2491.175) [-2466.212] (-2481.517) * [-2471.635] (-2644.595) (-2503.091) (-2501.221) -- 0:26:11
444000 -- (-2685.596) (-2479.970) (-2482.350) [-2476.375] * [-2468.656] (-2663.426) (-2503.462) (-2484.324) -- 0:26:09
445000 -- (-2672.835) (-2482.345) [-2460.117] (-2486.153) * (-2466.379) (-2661.129) (-2503.246) [-2486.136] -- 0:26:05
Average standard deviation of split frequencies: 0.022031
446000 -- (-2664.185) (-2486.744) [-2455.311] (-2478.667) * [-2474.882] (-2665.028) (-2495.352) (-2482.386) -- 0:26:02
447000 -- (-2664.418) (-2479.255) [-2460.936] (-2477.850) * [-2472.152] (-2668.880) (-2479.050) (-2500.284) -- 0:26:00
448000 -- (-2663.690) (-2467.823) (-2469.840) [-2470.228] * [-2474.886] (-2674.698) (-2480.491) (-2478.209) -- 0:25:56
449000 -- (-2667.425) (-2480.372) (-2499.984) [-2469.198] * [-2451.838] (-2663.949) (-2473.993) (-2489.326) -- 0:25:52
450000 -- (-2670.896) (-2500.675) [-2480.082] (-2485.215) * [-2452.064] (-2676.717) (-2468.035) (-2491.919) -- 0:25:49
Average standard deviation of split frequencies: 0.022278
451000 -- (-2665.513) (-2512.346) (-2466.698) [-2471.767] * [-2451.435] (-2663.939) (-2466.417) (-2492.262) -- 0:25:45
452000 -- (-2675.238) (-2530.956) (-2449.348) [-2476.303] * (-2464.074) (-2665.385) [-2471.618] (-2493.709) -- 0:25:43
453000 -- (-2663.858) (-2539.035) (-2467.017) [-2470.377] * (-2470.071) (-2686.465) [-2464.497] (-2484.618) -- 0:25:39
454000 -- (-2678.195) (-2528.049) [-2471.283] (-2472.150) * [-2486.794] (-2655.049) (-2473.900) (-2476.157) -- 0:25:36
455000 -- (-2666.944) (-2508.762) (-2471.243) [-2472.223] * (-2487.688) (-2653.614) (-2467.822) [-2469.187] -- 0:25:33
Average standard deviation of split frequencies: 0.021798
456000 -- (-2675.817) (-2499.911) [-2477.149] (-2469.980) * (-2488.700) (-2640.847) [-2471.036] (-2467.631) -- 0:25:30
457000 -- (-2683.260) (-2513.323) [-2475.931] (-2471.948) * [-2490.349] (-2636.763) (-2468.862) (-2469.716) -- 0:25:28
458000 -- (-2679.390) (-2495.571) (-2487.615) [-2463.627] * (-2476.465) (-2665.058) (-2473.825) [-2468.596] -- 0:25:24
459000 -- (-2673.451) (-2495.820) (-2475.920) [-2450.548] * [-2467.871] (-2662.394) (-2481.150) (-2471.136) -- 0:25:21
460000 -- (-2706.316) (-2484.311) (-2465.897) [-2452.196] * [-2478.247] (-2663.177) (-2466.726) (-2488.047) -- 0:25:17
Average standard deviation of split frequencies: 0.021440
461000 -- (-2695.580) [-2474.341] (-2491.387) (-2450.274) * (-2475.734) (-2656.833) [-2465.952] (-2487.721) -- 0:25:15
462000 -- (-2682.163) (-2474.588) (-2481.139) [-2457.105] * (-2487.855) (-2670.248) [-2459.870] (-2473.514) -- 0:25:11
463000 -- (-2699.732) (-2473.082) (-2492.270) [-2455.538] * (-2490.957) (-2668.186) (-2466.615) [-2470.394] -- 0:25:08
464000 -- (-2695.815) (-2482.400) (-2495.724) [-2459.326] * (-2494.693) (-2670.784) (-2463.238) [-2459.796] -- 0:25:06
465000 -- (-2702.537) (-2492.147) (-2498.958) [-2451.769] * (-2482.703) (-2676.239) [-2456.077] (-2459.198) -- 0:25:02
Average standard deviation of split frequencies: 0.021877
466000 -- (-2714.937) (-2478.123) (-2509.290) [-2452.844] * (-2464.185) (-2680.770) [-2472.241] (-2480.430) -- 0:24:58
467000 -- (-2710.874) (-2476.223) (-2504.004) [-2465.571] * [-2471.218] (-2657.292) (-2484.128) (-2461.070) -- 0:24:56
468000 -- (-2680.490) (-2470.911) (-2513.489) [-2468.775] * (-2467.414) (-2663.398) (-2504.671) [-2449.650] -- 0:24:53
469000 -- (-2700.105) (-2478.672) (-2516.092) [-2465.199] * (-2477.369) (-2666.348) (-2468.448) [-2460.941] -- 0:24:49
470000 -- (-2695.627) (-2476.295) (-2520.311) [-2469.506] * (-2469.540) (-2654.076) (-2489.865) [-2466.027] -- 0:24:47
Average standard deviation of split frequencies: 0.022734
471000 -- (-2682.246) (-2464.568) (-2498.098) [-2468.008] * (-2478.739) (-2649.037) (-2475.559) [-2452.590] -- 0:24:43
472000 -- (-2666.791) (-2479.254) (-2504.085) [-2475.361] * (-2482.928) (-2671.198) [-2464.767] (-2474.828) -- 0:24:41
473000 -- (-2650.855) (-2486.172) (-2494.109) [-2467.749] * (-2481.125) (-2660.428) [-2466.792] (-2491.735) -- 0:24:38
474000 -- (-2653.209) (-2477.011) (-2496.791) [-2459.589] * (-2489.275) (-2664.041) [-2481.350] (-2479.823) -- 0:24:34
475000 -- (-2675.456) (-2461.505) (-2510.658) [-2468.119] * [-2481.065] (-2661.597) (-2503.451) (-2478.235) -- 0:24:32
Average standard deviation of split frequencies: 0.022933
476000 -- (-2671.641) (-2479.787) (-2495.676) [-2471.338] * (-2480.366) (-2668.072) (-2508.988) [-2467.368] -- 0:24:29
477000 -- (-2679.156) (-2493.359) (-2490.438) [-2453.370] * [-2472.256] (-2660.179) (-2512.360) (-2472.453) -- 0:24:25
478000 -- (-2676.430) (-2464.549) (-2491.077) [-2461.246] * [-2467.160] (-2643.450) (-2498.036) (-2467.852) -- 0:24:23
479000 -- (-2688.961) (-2467.530) (-2497.799) [-2463.647] * (-2474.017) (-2649.893) [-2473.145] (-2506.612) -- 0:24:20
480000 -- (-2684.315) (-2469.462) (-2514.707) [-2455.803] * [-2462.719] (-2667.333) (-2492.358) (-2484.481) -- 0:24:17
Average standard deviation of split frequencies: 0.023012
481000 -- (-2668.812) [-2478.448] (-2501.191) (-2468.079) * [-2458.870] (-2661.644) (-2495.725) (-2464.135) -- 0:24:14
482000 -- (-2657.659) (-2482.464) (-2489.952) [-2467.383] * [-2456.875] (-2669.627) (-2473.413) (-2473.747) -- 0:24:11
483000 -- (-2659.200) (-2476.704) (-2495.094) [-2465.324] * [-2462.245] (-2649.522) (-2472.427) (-2482.874) -- 0:24:08
484000 -- (-2652.243) [-2473.259] (-2490.467) (-2472.736) * (-2467.280) (-2665.452) (-2480.964) [-2478.760] -- 0:24:05
485000 -- (-2684.518) (-2480.993) (-2502.131) [-2469.883] * (-2480.413) (-2673.087) (-2480.418) [-2470.522] -- 0:24:02
Average standard deviation of split frequencies: 0.023144
486000 -- (-2670.218) (-2472.384) (-2485.293) [-2458.170] * (-2471.875) (-2642.984) [-2454.096] (-2460.244) -- 0:23:59
487000 -- (-2675.540) [-2481.731] (-2493.531) (-2472.326) * (-2498.765) (-2641.919) [-2456.265] (-2467.375) -- 0:23:55
488000 -- (-2672.043) [-2463.467] (-2514.629) (-2471.205) * (-2499.482) (-2659.169) (-2466.372) [-2468.467] -- 0:23:53
489000 -- (-2678.005) [-2463.938] (-2507.270) (-2471.361) * (-2488.904) (-2665.768) [-2458.591] (-2460.419) -- 0:23:49
490000 -- (-2668.556) [-2467.898] (-2507.432) (-2485.886) * (-2495.549) (-2670.640) [-2459.031] (-2474.319) -- 0:23:45
Average standard deviation of split frequencies: 0.023804
491000 -- (-2679.088) [-2461.538] (-2508.978) (-2479.333) * (-2492.229) (-2664.442) [-2463.462] (-2489.157) -- 0:23:43
492000 -- (-2681.365) (-2465.386) (-2520.484) [-2482.699] * (-2497.764) (-2665.317) [-2461.329] (-2488.315) -- 0:23:39
493000 -- (-2679.392) [-2458.395] (-2503.088) (-2471.990) * (-2487.112) (-2672.024) [-2473.285] (-2481.347) -- 0:23:36
494000 -- (-2674.876) [-2455.871] (-2507.615) (-2475.527) * (-2491.710) (-2668.510) [-2466.972] (-2473.145) -- 0:23:33
495000 -- (-2670.626) [-2471.987] (-2494.387) (-2489.949) * (-2499.073) (-2659.212) [-2463.743] (-2467.576) -- 0:23:29
Average standard deviation of split frequencies: 0.023816
496000 -- (-2663.809) [-2456.988] (-2488.282) (-2502.619) * (-2537.531) (-2665.436) [-2460.745] (-2470.674) -- 0:23:26
497000 -- (-2665.462) [-2461.611] (-2493.681) (-2515.079) * (-2504.231) (-2665.635) (-2469.535) [-2459.898] -- 0:23:23
498000 -- (-2682.118) [-2449.051] (-2504.543) (-2487.593) * (-2506.031) (-2666.136) [-2455.663] (-2463.447) -- 0:23:20
499000 -- (-2665.045) [-2443.529] (-2498.199) (-2479.688) * (-2502.023) (-2651.701) (-2469.607) [-2459.388] -- 0:23:17
500000 -- (-2657.097) [-2458.548] (-2483.238) (-2484.901) * (-2490.748) (-2677.462) (-2477.224) [-2460.466] -- 0:23:14
Average standard deviation of split frequencies: 0.023752
501000 -- (-2660.958) (-2459.743) [-2462.873] (-2481.433) * (-2482.174) (-2688.731) (-2474.264) [-2477.223] -- 0:23:10
502000 -- (-2662.973) [-2467.654] (-2466.469) (-2496.122) * [-2481.454] (-2687.171) (-2482.219) (-2473.033) -- 0:23:07
503000 -- (-2675.158) (-2477.068) [-2472.073] (-2490.315) * (-2498.857) (-2663.311) (-2472.777) [-2464.328] -- 0:23:04
504000 -- (-2675.999) (-2461.947) [-2469.656] (-2480.686) * (-2493.645) (-2641.704) [-2470.119] (-2484.138) -- 0:23:02
505000 -- (-2682.125) [-2476.380] (-2469.322) (-2483.054) * (-2503.430) (-2647.934) [-2467.020] (-2470.371) -- 0:23:01
Average standard deviation of split frequencies: 0.023235
506000 -- (-2673.041) (-2494.391) [-2461.731] (-2484.967) * (-2515.792) (-2651.160) [-2472.633] (-2469.742) -- 0:22:58
507000 -- (-2660.552) (-2490.310) [-2462.692] (-2493.802) * (-2497.455) (-2658.649) [-2478.240] (-2477.695) -- 0:22:56
508000 -- (-2662.404) (-2481.118) [-2450.397] (-2493.500) * (-2490.063) (-2646.467) [-2488.443] (-2478.521) -- 0:22:55
509000 -- (-2661.621) (-2469.589) [-2464.156] (-2513.806) * (-2493.060) (-2652.673) [-2488.092] (-2493.161) -- 0:22:53
510000 -- (-2659.480) [-2478.124] (-2444.183) (-2502.514) * [-2498.682] (-2664.626) (-2481.603) (-2488.309) -- 0:22:52
Average standard deviation of split frequencies: 0.023023
511000 -- (-2648.812) (-2500.577) [-2454.024] (-2478.821) * (-2487.583) (-2659.649) (-2482.300) [-2468.401] -- 0:22:50
512000 -- (-2657.232) (-2511.491) (-2458.202) [-2478.684] * (-2487.147) (-2661.765) (-2502.236) [-2475.556] -- 0:22:47
513000 -- (-2648.258) (-2518.869) [-2457.476] (-2471.451) * (-2467.676) (-2668.667) (-2487.414) [-2446.015] -- 0:22:46
514000 -- (-2643.657) (-2525.220) [-2452.285] (-2472.952) * (-2477.587) (-2659.871) (-2479.188) [-2458.520] -- 0:22:44
515000 -- (-2670.032) (-2510.356) [-2460.830] (-2472.029) * (-2481.426) (-2647.344) (-2486.777) [-2459.332] -- 0:22:42
Average standard deviation of split frequencies: 0.023140
516000 -- (-2677.187) (-2500.343) (-2461.805) [-2468.573] * (-2491.635) (-2639.542) (-2494.750) [-2445.081] -- 0:22:41
517000 -- (-2670.806) (-2492.012) (-2462.487) [-2471.286] * (-2491.599) (-2644.354) (-2489.905) [-2448.068] -- 0:22:39
518000 -- (-2663.183) (-2494.617) (-2461.654) [-2470.978] * (-2492.546) (-2635.001) (-2480.111) [-2464.774] -- 0:22:36
519000 -- (-2662.038) [-2487.210] (-2495.946) (-2471.408) * (-2502.877) (-2652.576) (-2484.022) [-2457.311] -- 0:22:34
520000 -- (-2664.753) [-2466.354] (-2488.219) (-2487.506) * (-2506.390) (-2658.625) (-2482.108) [-2467.566] -- 0:22:32
Average standard deviation of split frequencies: 0.023584
521000 -- (-2671.339) [-2447.952] (-2470.721) (-2486.105) * (-2508.126) (-2648.323) [-2476.483] (-2476.483) -- 0:22:30
522000 -- (-2666.780) (-2454.947) (-2479.819) [-2466.381] * (-2523.974) (-2654.523) [-2481.041] (-2460.335) -- 0:22:28
523000 -- (-2682.986) [-2463.976] (-2470.479) (-2468.262) * (-2509.444) (-2646.023) (-2475.564) [-2455.856] -- 0:22:26
524000 -- (-2685.997) [-2458.059] (-2481.268) (-2474.225) * (-2509.628) (-2656.919) (-2472.576) [-2457.613] -- 0:22:24
525000 -- (-2668.652) (-2483.443) (-2483.081) [-2460.678] * (-2500.614) (-2666.236) (-2491.579) [-2460.110] -- 0:22:21
Average standard deviation of split frequencies: 0.023133
526000 -- (-2666.165) (-2473.734) [-2478.713] (-2473.893) * (-2501.785) (-2666.200) (-2486.531) [-2460.602] -- 0:22:19
527000 -- (-2678.576) (-2482.240) (-2477.532) [-2477.720] * (-2478.489) (-2678.179) (-2477.666) [-2464.850] -- 0:22:17
528000 -- (-2655.550) (-2473.607) [-2467.698] (-2478.221) * (-2477.320) (-2669.139) (-2501.825) [-2454.354] -- 0:22:15
529000 -- (-2639.394) (-2490.039) [-2466.246] (-2477.517) * (-2492.375) (-2662.386) (-2502.904) [-2454.008] -- 0:22:12
530000 -- (-2654.220) (-2491.657) [-2447.995] (-2474.332) * (-2506.764) (-2671.946) (-2478.169) [-2459.837] -- 0:22:10
Average standard deviation of split frequencies: 0.023678
531000 -- (-2664.961) (-2487.247) [-2461.153] (-2485.592) * (-2510.719) (-2662.981) [-2471.770] (-2471.030) -- 0:22:08
532000 -- (-2678.372) (-2487.324) [-2462.670] (-2476.304) * (-2485.296) (-2662.541) [-2468.264] (-2484.509) -- 0:22:06
533000 -- (-2677.375) (-2497.767) (-2467.173) [-2463.850] * (-2488.447) (-2672.422) [-2476.680] (-2495.091) -- 0:22:04
534000 -- (-2678.653) (-2503.065) (-2457.296) [-2469.850] * [-2493.710] (-2671.822) (-2490.538) (-2493.708) -- 0:22:02
535000 -- (-2683.652) (-2520.816) [-2462.692] (-2466.490) * [-2467.160] (-2678.336) (-2489.018) (-2493.298) -- 0:22:00
Average standard deviation of split frequencies: 0.023343
536000 -- (-2674.157) (-2514.604) (-2460.642) [-2465.790] * [-2456.282] (-2667.280) (-2478.465) (-2508.059) -- 0:21:58
537000 -- (-2664.452) (-2496.207) (-2461.703) [-2462.927] * [-2457.520] (-2662.109) (-2493.078) (-2514.896) -- 0:21:56
538000 -- (-2667.488) (-2494.833) (-2470.103) [-2472.615] * (-2465.877) (-2654.598) [-2475.217] (-2521.616) -- 0:21:53
539000 -- (-2671.996) (-2501.575) (-2486.086) [-2463.140] * [-2475.930] (-2659.874) (-2477.263) (-2511.200) -- 0:21:52
540000 -- (-2647.890) (-2513.177) (-2485.209) [-2467.111] * [-2475.158] (-2666.659) (-2491.602) (-2504.308) -- 0:21:50
Average standard deviation of split frequencies: 0.023020
541000 -- (-2659.664) (-2502.281) (-2486.464) [-2459.669] * [-2455.643] (-2669.115) (-2503.514) (-2493.156) -- 0:21:47
542000 -- (-2643.468) (-2488.290) (-2490.676) [-2459.241] * [-2461.059] (-2667.038) (-2505.493) (-2502.011) -- 0:21:45
543000 -- (-2647.176) (-2478.653) (-2479.392) [-2454.104] * [-2463.111] (-2675.706) (-2509.593) (-2499.039) -- 0:21:43
544000 -- (-2675.576) (-2485.411) (-2481.758) [-2458.978] * [-2462.272] (-2660.939) (-2512.644) (-2474.482) -- 0:21:41
545000 -- (-2661.958) (-2470.139) (-2500.113) [-2462.688] * [-2455.883] (-2690.347) (-2507.559) (-2484.585) -- 0:21:39
Average standard deviation of split frequencies: 0.022889
546000 -- (-2656.126) [-2470.431] (-2491.822) (-2472.679) * [-2458.031] (-2656.940) (-2484.167) (-2481.266) -- 0:21:37
547000 -- (-2671.416) [-2460.076] (-2489.522) (-2468.854) * [-2463.009] (-2684.869) (-2478.354) (-2493.246) -- 0:21:35
548000 -- (-2670.916) (-2485.738) (-2467.327) [-2485.389] * [-2463.870] (-2656.750) (-2490.171) (-2489.445) -- 0:21:33
549000 -- (-2668.958) (-2494.442) [-2467.870] (-2490.253) * [-2460.102] (-2655.301) (-2492.162) (-2486.573) -- 0:21:30
550000 -- (-2677.427) (-2503.241) [-2474.663] (-2479.966) * [-2464.661] (-2646.534) (-2494.569) (-2468.574) -- 0:21:28
Average standard deviation of split frequencies: 0.022730
551000 -- (-2666.248) (-2519.303) (-2462.772) [-2471.452] * (-2475.318) (-2669.192) [-2476.983] (-2474.194) -- 0:21:26
552000 -- (-2654.712) (-2510.985) [-2457.035] (-2476.032) * [-2466.088] (-2654.323) (-2479.612) (-2471.760) -- 0:21:23
553000 -- (-2657.503) (-2485.015) (-2456.805) [-2474.747] * [-2463.431] (-2649.728) (-2478.217) (-2479.087) -- 0:21:21
554000 -- (-2651.532) (-2492.682) [-2448.182] (-2476.535) * [-2464.683] (-2663.429) (-2481.740) (-2490.821) -- 0:21:19
555000 -- (-2670.187) (-2483.585) (-2466.402) [-2463.962] * [-2464.652] (-2651.758) (-2483.450) (-2482.670) -- 0:21:17
Average standard deviation of split frequencies: 0.023670
556000 -- (-2676.468) (-2503.420) (-2470.541) [-2473.008] * (-2464.748) (-2658.317) (-2492.168) [-2478.922] -- 0:21:15
557000 -- (-2662.719) (-2484.309) [-2460.670] (-2473.735) * [-2463.271] (-2646.137) (-2499.533) (-2461.462) -- 0:21:12
558000 -- (-2659.392) (-2510.676) (-2467.396) [-2472.656] * [-2473.293] (-2643.615) (-2504.781) (-2475.621) -- 0:21:10
559000 -- (-2665.577) (-2485.358) [-2458.676] (-2478.025) * (-2467.007) (-2656.359) (-2509.035) [-2463.540] -- 0:21:07
560000 -- (-2633.614) (-2488.840) [-2474.732] (-2485.324) * (-2479.372) (-2659.377) (-2480.035) [-2470.449] -- 0:21:05
Average standard deviation of split frequencies: 0.022921
561000 -- (-2633.676) (-2505.358) (-2474.774) [-2470.255] * (-2474.906) (-2652.800) (-2481.197) [-2482.696] -- 0:21:01
562000 -- (-2648.059) (-2491.903) (-2474.110) [-2482.004] * [-2467.944] (-2639.554) (-2465.100) (-2488.283) -- 0:20:58
563000 -- (-2645.535) [-2492.970] (-2479.296) (-2490.876) * [-2465.350] (-2649.361) (-2481.466) (-2484.435) -- 0:20:55
564000 -- (-2641.424) (-2495.450) [-2471.662] (-2484.162) * (-2475.989) (-2649.297) (-2480.694) [-2460.949] -- 0:20:52
565000 -- (-2660.230) (-2495.654) [-2462.142] (-2473.060) * [-2451.938] (-2658.530) (-2488.414) (-2465.468) -- 0:20:48
Average standard deviation of split frequencies: 0.023122
566000 -- (-2668.872) (-2497.367) [-2460.258] (-2474.412) * (-2462.601) (-2650.797) (-2493.258) [-2461.298] -- 0:20:46
567000 -- (-2677.328) (-2492.384) (-2473.431) [-2471.274] * (-2469.440) (-2646.298) (-2490.625) [-2468.321] -- 0:20:43
568000 -- (-2675.422) (-2502.343) [-2455.008] (-2492.696) * (-2479.724) (-2652.387) (-2481.628) [-2463.891] -- 0:20:40
569000 -- (-2659.652) (-2486.587) [-2464.204] (-2488.360) * (-2489.695) (-2672.733) (-2488.168) [-2455.832] -- 0:20:36
570000 -- (-2650.518) (-2483.768) [-2462.575] (-2485.526) * (-2479.972) (-2660.956) (-2486.893) [-2453.311] -- 0:20:34
Average standard deviation of split frequencies: 0.022902
571000 -- (-2672.564) [-2475.915] (-2474.249) (-2494.032) * (-2500.853) (-2674.575) (-2488.484) [-2449.621] -- 0:20:31
572000 -- (-2671.965) (-2470.844) [-2460.228] (-2475.481) * (-2479.246) (-2668.946) (-2506.860) [-2459.090] -- 0:20:27
573000 -- (-2662.055) [-2466.642] (-2471.812) (-2488.113) * (-2480.063) (-2678.376) [-2470.001] (-2470.442) -- 0:20:25
574000 -- (-2653.929) (-2476.041) [-2464.846] (-2491.861) * (-2473.537) (-2678.291) [-2464.065] (-2480.039) -- 0:20:21
575000 -- (-2651.863) (-2483.373) (-2452.098) [-2474.985] * [-2481.856] (-2657.589) (-2472.101) (-2496.583) -- 0:20:18
Average standard deviation of split frequencies: 0.022819
576000 -- (-2655.367) (-2485.986) [-2452.724] (-2489.927) * (-2487.370) (-2655.451) (-2498.021) [-2467.147] -- 0:20:15
577000 -- (-2655.744) (-2479.487) [-2455.144] (-2493.688) * (-2492.593) (-2683.686) (-2482.938) [-2461.787] -- 0:20:12
578000 -- (-2662.994) [-2473.305] (-2466.686) (-2509.326) * (-2487.620) (-2676.693) (-2473.314) [-2472.803] -- 0:20:09
579000 -- (-2666.784) (-2472.903) [-2473.280] (-2488.909) * (-2495.643) (-2671.716) [-2466.899] (-2473.038) -- 0:20:06
580000 -- (-2678.172) (-2500.496) [-2460.817] (-2489.983) * (-2484.960) (-2652.983) (-2476.292) [-2472.248] -- 0:20:03
Average standard deviation of split frequencies: 0.022675
581000 -- (-2669.686) (-2482.312) [-2462.977] (-2474.475) * (-2483.721) (-2654.973) (-2491.992) [-2461.822] -- 0:20:00
582000 -- (-2653.912) (-2486.277) (-2465.593) [-2484.903] * (-2497.302) (-2663.721) (-2506.229) [-2454.347] -- 0:19:57
583000 -- (-2642.642) (-2511.974) [-2458.088] (-2483.717) * (-2500.902) (-2667.163) (-2492.206) [-2466.483] -- 0:19:53
584000 -- (-2647.865) (-2487.655) [-2465.464] (-2494.038) * (-2491.868) (-2675.998) (-2503.091) [-2469.714] -- 0:19:51
585000 -- (-2664.274) (-2485.134) [-2474.905] (-2481.628) * (-2495.422) (-2654.718) (-2476.950) [-2476.319] -- 0:19:48
Average standard deviation of split frequencies: 0.022616
586000 -- (-2684.563) (-2494.276) (-2470.471) [-2471.431] * (-2488.323) (-2657.102) [-2479.405] (-2486.498) -- 0:19:44
587000 -- (-2697.203) [-2479.191] (-2470.337) (-2492.613) * (-2475.326) (-2655.051) [-2480.359] (-2476.306) -- 0:19:42
588000 -- (-2688.842) (-2474.332) [-2465.867] (-2494.547) * (-2473.329) (-2643.028) [-2477.249] (-2472.799) -- 0:19:38
589000 -- (-2667.916) (-2479.525) [-2476.616] (-2529.677) * (-2482.195) (-2667.132) [-2484.444] (-2481.478) -- 0:19:35
590000 -- (-2645.805) (-2475.635) [-2475.156] (-2484.529) * (-2462.379) (-2634.833) (-2501.339) [-2475.372] -- 0:19:32
Average standard deviation of split frequencies: 0.022147
591000 -- (-2668.896) (-2463.332) [-2480.368] (-2508.829) * [-2469.002] (-2645.728) (-2497.151) (-2482.618) -- 0:19:29
592000 -- (-2677.866) [-2463.655] (-2487.298) (-2508.631) * [-2474.500] (-2640.797) (-2500.412) (-2482.022) -- 0:19:26
593000 -- (-2659.175) [-2467.361] (-2478.689) (-2503.708) * [-2452.772] (-2630.770) (-2494.082) (-2480.019) -- 0:19:23
594000 -- (-2650.112) [-2466.215] (-2472.559) (-2506.562) * [-2454.645] (-2635.740) (-2501.510) (-2477.503) -- 0:19:19
595000 -- (-2652.174) [-2448.902] (-2481.378) (-2489.818) * [-2462.534] (-2634.361) (-2481.833) (-2477.825) -- 0:19:16
Average standard deviation of split frequencies: 0.022801
596000 -- (-2655.066) [-2454.115] (-2476.044) (-2493.055) * (-2481.851) (-2645.741) (-2486.310) [-2447.855] -- 0:19:13
597000 -- (-2653.677) [-2460.890] (-2480.695) (-2472.924) * (-2481.365) (-2638.652) (-2494.357) [-2463.725] -- 0:19:10
598000 -- (-2657.013) [-2448.148] (-2494.433) (-2476.505) * (-2486.544) (-2651.363) (-2485.648) [-2455.731] -- 0:19:07
599000 -- (-2656.882) [-2452.260] (-2497.109) (-2454.596) * (-2499.678) (-2655.357) (-2478.074) [-2461.202] -- 0:19:04
600000 -- (-2635.136) (-2456.041) (-2505.937) [-2449.470] * (-2504.207) (-2647.767) (-2502.515) [-2461.377] -- 0:19:01
Average standard deviation of split frequencies: 0.022759
601000 -- (-2656.491) [-2438.808] (-2497.073) (-2466.870) * (-2490.847) (-2663.516) (-2515.811) [-2457.147] -- 0:18:58
602000 -- (-2677.606) [-2452.862] (-2484.448) (-2460.023) * (-2488.164) (-2656.319) (-2491.373) [-2471.320] -- 0:18:56
603000 -- (-2659.571) [-2459.494] (-2490.644) (-2465.296) * (-2496.813) (-2660.230) (-2502.125) [-2470.594] -- 0:18:54
604000 -- (-2656.344) (-2475.824) (-2495.853) [-2457.281] * (-2494.167) (-2667.275) (-2487.290) [-2475.046] -- 0:18:52
605000 -- (-2640.329) (-2462.331) (-2484.407) [-2457.067] * [-2474.622] (-2675.247) (-2509.149) (-2468.081) -- 0:18:49
Average standard deviation of split frequencies: 0.022489
606000 -- (-2660.728) (-2471.594) (-2482.444) [-2454.387] * [-2471.581] (-2665.092) (-2485.137) (-2474.354) -- 0:18:46
607000 -- (-2666.094) (-2488.031) (-2482.996) [-2467.061] * (-2459.546) (-2654.756) (-2504.021) [-2465.103] -- 0:18:43
608000 -- (-2658.359) (-2476.264) (-2479.137) [-2462.037] * [-2465.054] (-2662.257) (-2496.123) (-2476.191) -- 0:18:40
609000 -- (-2664.362) (-2482.760) (-2486.464) [-2467.745] * [-2469.439] (-2651.994) (-2502.678) (-2469.208) -- 0:18:37
610000 -- (-2671.773) (-2481.143) (-2482.051) [-2472.829] * [-2468.790] (-2670.144) (-2495.300) (-2482.004) -- 0:18:34
Average standard deviation of split frequencies: 0.022742
611000 -- (-2653.929) [-2474.745] (-2472.659) (-2485.387) * (-2461.813) (-2665.162) [-2475.692] (-2464.998) -- 0:18:30
612000 -- (-2653.887) (-2486.245) [-2475.383] (-2479.610) * (-2479.847) (-2672.333) [-2471.770] (-2470.563) -- 0:18:28
613000 -- (-2664.246) (-2508.076) (-2480.891) [-2483.117] * (-2482.390) (-2660.201) (-2485.603) [-2457.871] -- 0:18:26
614000 -- (-2663.960) (-2500.987) (-2483.803) [-2485.376] * [-2480.818] (-2666.072) (-2477.223) (-2453.051) -- 0:18:23
615000 -- (-2669.123) (-2486.798) (-2500.213) [-2472.147] * (-2486.040) (-2668.375) [-2452.290] (-2459.691) -- 0:18:21
Average standard deviation of split frequencies: 0.022666
616000 -- (-2665.609) [-2477.641] (-2498.888) (-2464.656) * (-2495.425) (-2660.885) (-2468.116) [-2456.389] -- 0:18:19
617000 -- (-2674.255) (-2467.122) (-2504.429) [-2447.135] * (-2503.823) (-2667.493) (-2463.197) [-2463.127] -- 0:18:16
618000 -- (-2673.990) (-2487.608) (-2495.552) [-2453.194] * (-2503.365) (-2688.955) (-2469.024) [-2470.888] -- 0:18:14
619000 -- (-2675.449) (-2496.928) (-2481.173) [-2462.137] * (-2492.238) (-2679.962) [-2457.001] (-2467.937) -- 0:18:11
620000 -- (-2661.651) (-2480.152) (-2492.461) [-2458.405] * (-2476.236) (-2667.982) (-2486.029) [-2469.276] -- 0:18:09
Average standard deviation of split frequencies: 0.022483
621000 -- (-2644.664) (-2473.825) [-2485.480] (-2456.405) * (-2487.689) (-2676.765) [-2461.852] (-2478.441) -- 0:18:06
622000 -- (-2671.373) (-2489.026) (-2488.298) [-2463.083] * (-2497.069) (-2677.552) [-2460.903] (-2476.286) -- 0:18:04
623000 -- (-2658.222) (-2495.644) [-2477.149] (-2465.289) * (-2521.766) (-2688.589) [-2465.671] (-2477.836) -- 0:18:02
624000 -- (-2677.027) (-2507.390) (-2488.370) [-2452.030] * (-2485.621) (-2688.117) [-2462.223] (-2487.095) -- 0:17:59
625000 -- (-2661.366) (-2501.434) (-2484.621) [-2451.739] * (-2496.995) (-2663.071) [-2457.945] (-2480.897) -- 0:17:57
Average standard deviation of split frequencies: 0.022155
626000 -- (-2665.457) (-2497.515) (-2485.990) [-2454.691] * (-2481.713) (-2656.603) [-2461.376] (-2508.259) -- 0:17:53
627000 -- (-2662.203) (-2500.082) (-2504.507) [-2450.890] * (-2494.904) (-2644.372) [-2463.193] (-2479.947) -- 0:17:50
628000 -- (-2653.809) (-2509.916) (-2483.420) [-2456.465] * (-2496.228) (-2647.226) (-2476.948) [-2482.040] -- 0:17:47
629000 -- (-2666.284) (-2509.438) (-2492.959) [-2450.133] * (-2485.516) (-2650.249) (-2476.268) [-2482.936] -- 0:17:44
630000 -- (-2662.624) (-2480.002) (-2476.604) [-2454.063] * (-2492.510) (-2652.876) (-2496.283) [-2483.037] -- 0:17:41
Average standard deviation of split frequencies: 0.022059
631000 -- (-2655.951) (-2463.095) (-2507.043) [-2456.570] * (-2495.988) (-2661.045) [-2476.326] (-2490.270) -- 0:17:38
632000 -- (-2663.788) [-2455.861] (-2495.616) (-2462.881) * (-2480.149) (-2669.446) (-2477.277) [-2480.151] -- 0:17:35
633000 -- (-2686.985) (-2457.500) (-2510.693) [-2460.693] * (-2482.114) (-2665.949) (-2487.346) [-2468.542] -- 0:17:32
634000 -- (-2662.548) [-2467.877] (-2494.311) (-2468.014) * (-2487.200) (-2679.692) (-2490.279) [-2471.171] -- 0:17:29
635000 -- (-2651.428) (-2476.384) (-2485.839) [-2456.839] * (-2491.240) (-2692.898) [-2489.664] (-2484.858) -- 0:17:26
Average standard deviation of split frequencies: 0.022449
636000 -- (-2674.972) [-2465.111] (-2514.395) (-2462.803) * (-2499.514) (-2685.992) [-2483.095] (-2496.098) -- 0:17:23
637000 -- (-2670.672) (-2470.920) (-2491.570) [-2462.317] * (-2495.755) (-2698.502) [-2482.518] (-2494.991) -- 0:17:20
638000 -- (-2681.361) (-2470.642) (-2482.184) [-2463.317] * (-2518.807) (-2705.036) (-2488.452) [-2473.944] -- 0:17:17
639000 -- (-2667.080) [-2458.998] (-2473.028) (-2484.909) * (-2498.312) (-2696.997) (-2498.114) [-2473.453] -- 0:17:14
640000 -- (-2666.390) [-2456.017] (-2479.079) (-2468.478) * (-2498.076) (-2691.505) (-2485.171) [-2477.291] -- 0:17:11
Average standard deviation of split frequencies: 0.022336
641000 -- (-2660.333) [-2461.074] (-2493.318) (-2472.426) * (-2491.041) (-2693.617) [-2483.400] (-2477.953) -- 0:17:08
642000 -- (-2651.696) [-2465.646] (-2480.419) (-2483.365) * (-2485.181) (-2676.350) [-2480.220] (-2494.290) -- 0:17:05
643000 -- (-2683.914) [-2469.163] (-2502.870) (-2466.644) * [-2477.560] (-2673.883) (-2467.905) (-2492.225) -- 0:17:03
644000 -- (-2673.366) (-2480.089) (-2504.969) [-2457.405] * (-2492.086) (-2665.407) (-2459.220) [-2470.383] -- 0:17:00
645000 -- (-2678.273) (-2480.661) (-2490.954) [-2450.369] * (-2488.851) (-2657.802) [-2464.230] (-2476.310) -- 0:16:58
Average standard deviation of split frequencies: 0.021842
646000 -- (-2672.726) [-2475.259] (-2499.080) (-2473.977) * (-2501.243) (-2662.512) (-2478.320) [-2459.131] -- 0:16:55
647000 -- (-2678.163) [-2469.352] (-2503.436) (-2487.969) * (-2502.481) (-2665.153) [-2479.529] (-2469.676) -- 0:16:53
648000 -- (-2675.324) [-2469.489] (-2496.892) (-2487.981) * (-2491.160) (-2667.793) [-2468.811] (-2479.191) -- 0:16:51
649000 -- (-2678.167) [-2469.502] (-2477.435) (-2511.234) * (-2481.801) (-2669.369) [-2456.810] (-2494.831) -- 0:16:49
650000 -- (-2667.762) [-2480.143] (-2488.954) (-2488.111) * (-2490.367) (-2660.392) [-2457.200] (-2490.579) -- 0:16:46
Average standard deviation of split frequencies: 0.020952
651000 -- (-2680.844) [-2476.283] (-2493.879) (-2485.081) * (-2495.721) (-2662.604) [-2462.065] (-2484.863) -- 0:16:44
652000 -- (-2672.727) [-2472.149] (-2501.175) (-2474.601) * (-2487.445) (-2664.807) [-2449.230] (-2499.306) -- 0:16:42
653000 -- (-2667.632) [-2465.546] (-2496.483) (-2483.720) * (-2494.217) (-2650.376) [-2449.319] (-2465.390) -- 0:16:40
654000 -- (-2668.700) [-2480.713] (-2491.284) (-2471.949) * (-2508.336) (-2648.745) [-2466.829] (-2471.240) -- 0:16:37
655000 -- (-2673.798) (-2504.056) (-2491.563) [-2476.958] * (-2502.014) (-2658.036) [-2459.243] (-2474.478) -- 0:16:34
Average standard deviation of split frequencies: 0.020280
656000 -- (-2679.515) (-2497.772) (-2490.805) [-2486.771] * (-2484.320) (-2656.359) [-2457.620] (-2477.452) -- 0:16:32
657000 -- (-2683.105) (-2489.498) (-2492.953) [-2475.247] * (-2479.516) (-2656.821) [-2456.361] (-2479.137) -- 0:16:30
658000 -- (-2667.212) (-2487.125) (-2489.354) [-2478.717] * (-2490.849) (-2667.410) [-2465.768] (-2485.086) -- 0:16:28
659000 -- (-2668.277) (-2486.312) [-2465.136] (-2493.605) * (-2517.241) (-2660.247) [-2466.339] (-2478.821) -- 0:16:25
660000 -- (-2677.190) (-2501.497) [-2478.151] (-2479.866) * (-2507.234) (-2657.881) (-2460.899) [-2469.068] -- 0:16:22
Average standard deviation of split frequencies: 0.019788
661000 -- (-2663.026) [-2488.510] (-2482.592) (-2478.365) * (-2493.320) (-2655.431) [-2476.188] (-2476.869) -- 0:16:19
662000 -- (-2671.483) (-2482.507) [-2467.159] (-2513.864) * (-2517.138) (-2654.981) (-2491.755) [-2462.205] -- 0:16:17
663000 -- (-2674.305) [-2476.008] (-2474.454) (-2492.221) * (-2506.830) (-2645.886) (-2499.092) [-2461.057] -- 0:16:14
664000 -- (-2677.279) [-2474.292] (-2482.538) (-2487.699) * (-2520.969) (-2664.644) (-2509.038) [-2469.860] -- 0:16:12
665000 -- (-2674.236) [-2457.581] (-2481.992) (-2485.061) * (-2505.589) (-2697.776) (-2495.900) [-2468.394] -- 0:16:10
Average standard deviation of split frequencies: 0.019070
666000 -- (-2683.480) [-2466.796] (-2497.057) (-2496.358) * (-2503.996) (-2676.613) [-2480.292] (-2477.115) -- 0:16:07
667000 -- (-2679.341) (-2474.300) [-2489.117] (-2503.565) * (-2482.369) (-2657.134) (-2473.248) [-2469.745] -- 0:16:04
668000 -- (-2671.565) [-2468.352] (-2515.467) (-2514.894) * [-2493.379] (-2653.222) (-2475.876) (-2468.063) -- 0:16:01
669000 -- (-2686.838) (-2461.997) (-2512.439) [-2481.448] * (-2501.188) (-2661.965) (-2481.066) [-2463.390] -- 0:15:59
670000 -- (-2678.239) [-2465.397] (-2501.087) (-2488.971) * (-2507.690) (-2667.905) (-2465.010) [-2455.487] -- 0:15:56
Average standard deviation of split frequencies: 0.018242
671000 -- (-2684.738) [-2448.829] (-2511.082) (-2488.899) * (-2495.760) (-2685.425) (-2468.693) [-2455.671] -- 0:15:54
672000 -- (-2686.192) [-2459.341] (-2504.636) (-2507.403) * (-2482.566) (-2700.424) (-2463.584) [-2471.435] -- 0:15:52
673000 -- (-2676.186) [-2480.844] (-2502.077) (-2480.793) * (-2472.078) (-2682.524) [-2452.614] (-2481.999) -- 0:15:49
674000 -- (-2672.589) (-2474.604) [-2487.255] (-2492.818) * (-2502.220) (-2683.678) [-2465.632] (-2482.413) -- 0:15:47
675000 -- (-2679.384) [-2478.008] (-2484.671) (-2499.521) * (-2495.678) (-2681.929) (-2463.934) [-2464.141] -- 0:15:44
Average standard deviation of split frequencies: 0.017887
676000 -- (-2686.089) (-2459.971) [-2469.324] (-2503.779) * [-2471.940] (-2654.532) (-2480.453) (-2469.124) -- 0:15:42
677000 -- (-2685.704) [-2478.056] (-2483.133) (-2491.108) * (-2494.565) (-2675.421) (-2460.292) [-2464.785] -- 0:15:39
678000 -- (-2684.391) (-2486.310) [-2487.104] (-2503.530) * (-2503.316) (-2675.409) [-2462.372] (-2465.087) -- 0:15:37
679000 -- (-2700.575) [-2477.420] (-2472.720) (-2497.573) * (-2495.419) (-2679.153) [-2468.459] (-2470.690) -- 0:15:35
680000 -- (-2695.799) (-2478.644) [-2467.352] (-2494.742) * (-2495.296) (-2657.237) [-2476.403] (-2482.961) -- 0:15:32
Average standard deviation of split frequencies: 0.017464
681000 -- (-2706.587) (-2481.810) [-2459.215] (-2495.739) * (-2499.084) (-2661.079) (-2475.892) [-2474.026] -- 0:15:29
682000 -- (-2710.853) [-2469.610] (-2472.050) (-2521.248) * (-2490.303) (-2665.872) [-2454.547] (-2466.357) -- 0:15:26
683000 -- (-2693.329) [-2471.016] (-2482.664) (-2518.469) * (-2483.028) (-2672.380) (-2465.252) [-2461.939] -- 0:15:24
684000 -- (-2679.469) (-2478.215) [-2482.874] (-2493.595) * (-2488.584) (-2661.658) (-2477.825) [-2463.981] -- 0:15:21
685000 -- (-2693.811) [-2473.691] (-2483.367) (-2506.896) * (-2503.640) (-2660.961) (-2483.298) [-2474.381] -- 0:15:17
Average standard deviation of split frequencies: 0.016815
686000 -- (-2680.639) [-2469.641] (-2485.932) (-2484.948) * (-2502.363) (-2664.385) (-2479.986) [-2463.803] -- 0:15:14
687000 -- (-2668.119) (-2490.380) (-2472.363) [-2492.538] * (-2502.805) (-2657.998) (-2500.480) [-2464.677] -- 0:15:12
688000 -- (-2673.352) (-2478.597) [-2484.314] (-2481.647) * (-2489.034) (-2667.143) (-2496.991) [-2471.924] -- 0:15:09
689000 -- (-2680.273) (-2467.881) (-2485.158) [-2479.207] * [-2475.911] (-2659.852) (-2485.917) (-2468.142) -- 0:15:06
690000 -- (-2683.574) (-2465.271) [-2467.691] (-2509.799) * (-2498.057) (-2645.053) (-2494.575) [-2468.897] -- 0:15:04
Average standard deviation of split frequencies: 0.016480
691000 -- (-2674.602) [-2474.533] (-2461.146) (-2509.135) * (-2489.476) (-2656.936) (-2494.345) [-2474.026] -- 0:15:01
692000 -- (-2661.908) [-2468.281] (-2487.269) (-2508.883) * (-2524.296) (-2650.641) (-2483.227) [-2461.041] -- 0:14:59
693000 -- (-2659.593) [-2478.484] (-2490.753) (-2513.203) * (-2520.000) (-2659.271) (-2470.101) [-2450.119] -- 0:14:56
694000 -- (-2679.784) [-2472.809] (-2493.945) (-2525.759) * (-2530.704) (-2653.501) [-2472.388] (-2474.003) -- 0:14:53
695000 -- (-2698.590) [-2489.207] (-2493.250) (-2504.110) * (-2508.213) (-2647.236) (-2484.538) [-2467.497] -- 0:14:51
Average standard deviation of split frequencies: 0.016296
696000 -- (-2674.420) (-2500.142) [-2468.746] (-2496.179) * (-2480.410) (-2673.989) (-2498.544) [-2456.951] -- 0:14:48
697000 -- (-2663.105) (-2477.717) [-2465.886] (-2488.364) * (-2477.576) (-2679.282) (-2508.762) [-2452.235] -- 0:14:45
698000 -- (-2650.947) (-2470.319) [-2465.860] (-2509.201) * [-2467.099] (-2678.448) (-2500.058) (-2458.324) -- 0:14:43
699000 -- (-2668.554) (-2472.129) [-2477.257] (-2493.940) * [-2470.427] (-2665.093) (-2504.058) (-2480.421) -- 0:14:40
700000 -- (-2678.631) (-2475.045) [-2476.921] (-2501.582) * (-2481.870) (-2650.955) (-2494.326) [-2473.243] -- 0:14:38
Average standard deviation of split frequencies: 0.016027
701000 -- (-2681.504) [-2485.215] (-2477.034) (-2510.346) * (-2486.039) (-2654.147) (-2497.645) [-2473.226] -- 0:14:35
702000 -- (-2667.247) (-2488.429) [-2468.625] (-2515.198) * (-2486.844) (-2668.439) [-2491.307] (-2465.913) -- 0:14:32
703000 -- (-2672.259) [-2473.460] (-2487.304) (-2518.415) * (-2466.687) (-2638.893) (-2510.123) [-2455.956] -- 0:14:30
704000 -- (-2643.098) (-2482.139) [-2465.457] (-2505.218) * (-2490.995) (-2671.844) (-2497.365) [-2460.739] -- 0:14:27
705000 -- (-2634.703) (-2477.951) [-2465.177] (-2511.043) * (-2480.188) (-2667.947) (-2522.933) [-2462.296] -- 0:14:24
Average standard deviation of split frequencies: 0.015795
706000 -- (-2642.528) [-2487.267] (-2465.202) (-2520.844) * (-2481.528) (-2678.271) (-2484.408) [-2470.051] -- 0:14:22
707000 -- (-2646.997) [-2475.938] (-2483.274) (-2513.758) * (-2463.400) (-2657.742) (-2493.154) [-2477.798] -- 0:14:19
708000 -- (-2659.351) [-2484.126] (-2482.648) (-2520.606) * [-2452.215] (-2662.401) (-2501.758) (-2474.935) -- 0:14:17
709000 -- (-2657.135) [-2483.917] (-2484.302) (-2523.619) * [-2456.101] (-2663.055) (-2493.976) (-2488.586) -- 0:14:14
710000 -- (-2669.629) (-2488.772) [-2482.316] (-2512.835) * [-2451.552] (-2679.166) (-2488.310) (-2473.957) -- 0:14:11
Average standard deviation of split frequencies: 0.016065
711000 -- (-2668.294) (-2503.064) [-2472.956] (-2518.009) * [-2467.648] (-2682.730) (-2488.516) (-2465.864) -- 0:14:08
712000 -- (-2664.294) (-2500.799) [-2476.311] (-2500.201) * (-2483.577) (-2669.939) [-2464.143] (-2469.182) -- 0:14:06
713000 -- (-2669.975) [-2489.725] (-2489.576) (-2523.908) * (-2485.209) (-2681.067) (-2464.691) [-2467.411] -- 0:14:03
714000 -- (-2665.708) (-2500.728) [-2482.848] (-2507.782) * (-2493.990) (-2693.595) (-2492.448) [-2477.486] -- 0:14:00
715000 -- (-2665.636) (-2491.060) [-2477.927] (-2509.866) * (-2484.668) (-2687.467) (-2489.439) [-2499.171] -- 0:13:57
Average standard deviation of split frequencies: 0.016081
716000 -- (-2681.066) (-2483.977) [-2477.691] (-2525.091) * (-2486.751) (-2683.669) (-2493.667) [-2479.108] -- 0:13:55
717000 -- (-2676.317) [-2483.011] (-2495.025) (-2524.616) * (-2494.820) (-2666.380) [-2470.936] (-2477.037) -- 0:13:52
718000 -- (-2669.762) [-2492.133] (-2499.063) (-2517.070) * (-2490.756) (-2673.148) [-2472.224] (-2486.754) -- 0:13:49
719000 -- (-2659.654) [-2473.666] (-2510.499) (-2494.400) * (-2507.060) (-2658.440) (-2463.359) [-2477.916] -- 0:13:47
720000 -- (-2671.541) [-2471.960] (-2498.737) (-2485.993) * (-2489.401) (-2676.468) [-2457.371] (-2474.206) -- 0:13:44
Average standard deviation of split frequencies: 0.015977
721000 -- (-2659.400) (-2482.523) (-2526.345) [-2497.437] * (-2497.537) (-2665.697) [-2455.128] (-2487.825) -- 0:13:41
722000 -- (-2651.721) [-2457.098] (-2518.058) (-2506.386) * (-2482.659) (-2648.121) [-2465.229] (-2473.645) -- 0:13:39
723000 -- (-2656.596) [-2467.414] (-2522.844) (-2484.281) * (-2480.476) (-2653.951) [-2466.374] (-2485.359) -- 0:13:36
724000 -- (-2650.640) [-2478.093] (-2505.720) (-2516.509) * (-2478.101) (-2673.588) [-2447.384] (-2472.974) -- 0:13:33
725000 -- (-2662.982) [-2483.294] (-2501.407) (-2503.695) * (-2474.557) (-2665.968) [-2452.638] (-2490.753) -- 0:13:30
Average standard deviation of split frequencies: 0.016103
726000 -- (-2683.810) [-2462.224] (-2503.235) (-2495.973) * (-2478.861) (-2663.847) [-2464.080] (-2499.987) -- 0:13:27
727000 -- (-2696.317) (-2477.364) [-2500.165] (-2498.267) * (-2474.614) (-2657.306) [-2455.266] (-2505.566) -- 0:13:24
728000 -- (-2672.169) [-2467.920] (-2497.170) (-2489.139) * (-2467.228) (-2648.706) [-2454.393] (-2501.173) -- 0:13:21
729000 -- (-2659.013) [-2483.377] (-2500.857) (-2494.498) * [-2463.435] (-2643.975) (-2457.460) (-2492.361) -- 0:13:18
730000 -- (-2672.626) (-2493.445) (-2497.281) [-2484.136] * [-2476.763] (-2643.294) (-2485.515) (-2486.133) -- 0:13:14
Average standard deviation of split frequencies: 0.016129
731000 -- (-2688.697) [-2479.242] (-2499.131) (-2494.379) * [-2460.960] (-2647.597) (-2471.940) (-2498.001) -- 0:13:11
732000 -- (-2681.016) (-2481.263) [-2484.256] (-2476.975) * [-2473.332] (-2656.227) (-2485.873) (-2497.031) -- 0:13:08
733000 -- (-2677.562) [-2473.283] (-2492.501) (-2490.265) * (-2460.441) (-2646.048) (-2494.628) [-2471.559] -- 0:13:05
734000 -- (-2700.562) [-2470.882] (-2489.342) (-2500.353) * (-2479.159) (-2645.145) (-2462.546) [-2459.504] -- 0:13:02
735000 -- (-2675.598) [-2473.254] (-2491.764) (-2491.503) * (-2479.438) (-2652.432) [-2474.966] (-2457.891) -- 0:12:59
Average standard deviation of split frequencies: 0.015973
736000 -- (-2701.380) [-2463.345] (-2499.162) (-2491.780) * (-2497.987) (-2662.511) (-2476.318) [-2458.816] -- 0:12:56
737000 -- (-2688.479) (-2474.905) [-2485.612] (-2495.028) * (-2492.293) (-2651.250) (-2466.643) [-2465.016] -- 0:12:53
738000 -- (-2684.747) (-2473.655) (-2505.914) [-2487.611] * (-2497.217) (-2649.385) (-2476.299) [-2465.828] -- 0:12:50
739000 -- (-2682.199) [-2468.287] (-2499.633) (-2477.900) * (-2471.447) (-2676.082) (-2470.329) [-2451.444] -- 0:12:47
740000 -- (-2689.517) [-2457.135] (-2504.446) (-2482.482) * (-2489.691) (-2680.036) (-2489.592) [-2461.174] -- 0:12:45
Average standard deviation of split frequencies: 0.015904
741000 -- (-2688.594) (-2459.859) (-2501.344) [-2482.827] * [-2476.046] (-2674.611) (-2495.290) (-2482.959) -- 0:12:42
742000 -- (-2699.572) [-2451.214] (-2490.196) (-2489.796) * (-2473.096) (-2641.080) (-2502.057) [-2468.602] -- 0:12:39
743000 -- (-2695.561) [-2467.076] (-2490.188) (-2505.267) * (-2488.542) (-2645.761) (-2489.840) [-2461.548] -- 0:12:37
744000 -- (-2694.594) [-2473.068] (-2488.154) (-2500.126) * (-2488.837) (-2656.611) (-2517.181) [-2471.694] -- 0:12:34
745000 -- (-2675.050) [-2472.529] (-2484.091) (-2506.881) * (-2475.490) (-2657.753) (-2503.982) [-2456.725] -- 0:12:31
Average standard deviation of split frequencies: 0.016151
746000 -- (-2679.128) (-2465.744) [-2471.007] (-2518.139) * (-2486.830) (-2658.968) (-2500.083) [-2464.650] -- 0:12:29
747000 -- (-2673.133) [-2456.113] (-2473.372) (-2512.107) * (-2471.581) (-2657.470) (-2505.134) [-2465.070] -- 0:12:26
748000 -- (-2683.550) [-2468.743] (-2471.889) (-2514.282) * (-2474.944) (-2675.159) (-2515.151) [-2466.516] -- 0:12:23
749000 -- (-2665.262) (-2466.192) [-2465.833] (-2514.111) * (-2475.093) (-2668.796) (-2504.327) [-2469.642] -- 0:12:20
750000 -- (-2673.281) [-2463.076] (-2468.484) (-2501.186) * (-2482.864) (-2662.368) (-2497.654) [-2462.655] -- 0:12:17
Average standard deviation of split frequencies: 0.016464
751000 -- (-2666.404) (-2467.112) [-2467.110] (-2511.228) * (-2499.733) (-2657.666) [-2480.707] (-2462.664) -- 0:12:14
752000 -- (-2660.288) [-2472.895] (-2465.601) (-2504.577) * (-2474.807) (-2650.496) (-2496.053) [-2466.222] -- 0:12:10
753000 -- (-2647.603) (-2477.279) [-2462.919] (-2506.228) * (-2474.632) (-2672.204) (-2489.504) [-2444.278] -- 0:12:07
754000 -- (-2647.887) (-2470.174) [-2464.258] (-2525.139) * (-2479.337) (-2653.450) (-2490.819) [-2448.707] -- 0:12:04
755000 -- (-2656.216) [-2462.577] (-2467.563) (-2496.142) * (-2463.685) (-2658.883) (-2480.226) [-2455.007] -- 0:12:01
Average standard deviation of split frequencies: 0.016483
756000 -- (-2661.017) (-2470.093) [-2464.303] (-2498.539) * [-2458.304] (-2659.013) (-2495.429) (-2469.944) -- 0:11:58
757000 -- (-2654.001) (-2472.191) [-2463.746] (-2518.388) * (-2464.497) (-2675.586) (-2507.682) [-2471.817] -- 0:11:55
758000 -- (-2648.698) (-2464.157) [-2460.026] (-2496.127) * [-2456.344] (-2675.568) (-2489.538) (-2474.862) -- 0:11:52
759000 -- (-2645.091) (-2455.969) [-2459.701] (-2490.533) * [-2449.103] (-2666.994) (-2500.328) (-2465.541) -- 0:11:49
760000 -- (-2656.628) (-2458.131) [-2462.602] (-2476.644) * [-2449.074] (-2671.396) (-2504.353) (-2480.047) -- 0:11:46
Average standard deviation of split frequencies: 0.016419
761000 -- (-2660.898) [-2461.488] (-2474.749) (-2449.835) * [-2452.724] (-2656.073) (-2514.244) (-2476.560) -- 0:11:43
762000 -- (-2659.837) (-2475.135) (-2474.724) [-2455.325] * [-2448.571] (-2678.303) (-2513.741) (-2469.239) -- 0:11:40
763000 -- (-2661.276) [-2476.533] (-2482.500) (-2463.782) * (-2466.283) (-2691.463) (-2497.794) [-2467.079] -- 0:11:37
764000 -- (-2657.021) (-2482.066) (-2470.475) [-2453.482] * (-2480.097) (-2681.728) (-2480.239) [-2456.035] -- 0:11:34
765000 -- (-2650.883) (-2478.169) [-2458.538] (-2467.459) * (-2474.381) (-2684.590) [-2475.659] (-2486.318) -- 0:11:31
Average standard deviation of split frequencies: 0.016223
766000 -- (-2647.863) (-2473.535) (-2471.023) [-2452.893] * (-2496.930) (-2670.035) (-2480.877) [-2474.733] -- 0:11:27
767000 -- (-2637.937) (-2489.469) (-2462.941) [-2455.076] * (-2491.541) (-2683.947) (-2484.354) [-2476.111] -- 0:11:25
768000 -- (-2657.946) (-2474.926) (-2477.037) [-2459.681] * (-2480.807) (-2686.759) [-2470.237] (-2471.253) -- 0:11:21
769000 -- (-2645.473) (-2466.829) (-2485.856) [-2472.229] * (-2480.829) (-2663.072) [-2467.207] (-2499.801) -- 0:11:18
770000 -- (-2651.237) (-2488.156) (-2494.507) [-2465.885] * (-2502.009) (-2658.988) [-2457.836] (-2499.033) -- 0:11:15
Average standard deviation of split frequencies: 0.015991
771000 -- (-2654.754) [-2477.717] (-2475.291) (-2476.523) * (-2500.059) (-2650.438) [-2456.560] (-2501.846) -- 0:11:12
772000 -- (-2646.694) (-2482.167) [-2464.491] (-2480.401) * (-2490.258) (-2682.863) [-2474.343] (-2490.863) -- 0:11:09
773000 -- (-2645.594) (-2473.682) (-2465.867) [-2481.337] * (-2493.695) (-2688.338) [-2466.485] (-2498.450) -- 0:11:06
774000 -- (-2657.775) (-2497.955) [-2456.129] (-2468.213) * (-2494.657) (-2677.765) [-2457.667] (-2489.110) -- 0:11:03
775000 -- (-2650.334) (-2514.863) [-2448.771] (-2477.722) * (-2491.889) (-2662.366) [-2469.067] (-2512.008) -- 0:11:00
Average standard deviation of split frequencies: 0.016004
776000 -- (-2633.147) (-2498.853) [-2447.669] (-2466.772) * (-2493.905) (-2657.663) [-2471.898] (-2510.173) -- 0:10:57
777000 -- (-2637.109) (-2505.681) (-2458.841) [-2472.220] * (-2488.294) (-2666.427) (-2486.124) [-2493.592] -- 0:10:54
778000 -- (-2637.013) (-2519.190) [-2459.807] (-2466.389) * (-2495.882) (-2664.215) [-2471.487] (-2492.242) -- 0:10:51
779000 -- (-2663.819) (-2491.662) (-2472.655) [-2462.961] * (-2498.693) (-2668.532) (-2462.127) [-2469.990] -- 0:10:48
780000 -- (-2652.850) (-2484.766) (-2473.976) [-2477.588] * (-2485.366) (-2677.055) [-2457.546] (-2457.325) -- 0:10:45
Average standard deviation of split frequencies: 0.016232
781000 -- (-2662.556) (-2473.241) [-2465.751] (-2485.298) * (-2492.661) (-2663.527) [-2454.328] (-2456.302) -- 0:10:42
782000 -- (-2647.004) (-2469.962) [-2468.058] (-2491.121) * (-2491.334) (-2671.366) [-2446.596] (-2470.460) -- 0:10:39
783000 -- (-2642.454) [-2467.950] (-2463.940) (-2492.867) * (-2481.786) (-2675.249) (-2447.917) [-2461.259] -- 0:10:36
784000 -- (-2655.069) (-2474.149) (-2479.830) [-2479.583] * (-2486.886) (-2677.526) [-2455.359] (-2475.462) -- 0:10:33
785000 -- (-2642.665) (-2485.147) (-2480.534) [-2473.402] * (-2505.102) (-2685.689) (-2470.215) [-2463.980] -- 0:10:30
Average standard deviation of split frequencies: 0.016565
786000 -- (-2656.159) [-2483.835] (-2483.122) (-2478.807) * (-2495.085) (-2671.849) (-2465.852) [-2477.957] -- 0:10:27
787000 -- (-2665.503) (-2481.892) (-2476.748) [-2462.516] * (-2511.113) (-2689.666) [-2467.494] (-2470.693) -- 0:10:24
788000 -- (-2672.764) (-2486.312) [-2482.501] (-2474.997) * (-2508.880) (-2677.299) (-2469.103) [-2471.769] -- 0:10:21
789000 -- (-2663.926) (-2491.207) (-2487.896) [-2471.048] * (-2523.225) (-2667.904) (-2475.174) [-2468.462] -- 0:10:18
790000 -- (-2653.709) (-2477.044) (-2482.443) [-2469.412] * (-2522.388) (-2689.555) (-2469.377) [-2471.686] -- 0:10:15
Average standard deviation of split frequencies: 0.017642
791000 -- (-2649.584) [-2481.409] (-2467.405) (-2482.927) * (-2514.447) (-2659.539) [-2458.324] (-2474.016) -- 0:10:12
792000 -- (-2678.976) (-2484.995) [-2459.250] (-2487.550) * (-2505.260) (-2666.138) [-2468.890] (-2472.419) -- 0:10:09
793000 -- (-2661.178) (-2475.452) [-2451.552] (-2507.097) * (-2503.683) (-2667.131) [-2458.509] (-2479.515) -- 0:10:06
794000 -- (-2653.361) (-2475.963) [-2461.522] (-2504.332) * (-2494.844) (-2675.044) [-2467.509] (-2480.865) -- 0:10:03
795000 -- (-2676.412) (-2467.918) [-2456.206] (-2522.491) * (-2497.477) (-2671.685) [-2472.285] (-2484.910) -- 0:10:00
Average standard deviation of split frequencies: 0.018145
796000 -- (-2666.297) [-2474.661] (-2463.139) (-2510.087) * (-2511.523) (-2659.757) [-2454.043] (-2483.358) -- 0:09:57
797000 -- (-2662.476) (-2493.937) [-2465.595] (-2494.702) * (-2514.342) (-2662.060) [-2464.535] (-2475.265) -- 0:09:54
798000 -- (-2657.127) (-2497.729) [-2474.513] (-2520.547) * (-2505.447) (-2675.274) [-2446.258] (-2482.019) -- 0:09:51
799000 -- (-2652.753) (-2520.301) [-2473.710] (-2500.345) * (-2488.390) (-2675.142) (-2462.937) [-2472.975] -- 0:09:48
800000 -- (-2660.598) (-2538.674) [-2463.969] (-2506.535) * (-2501.186) (-2688.744) [-2466.467] (-2484.953) -- 0:09:45
Average standard deviation of split frequencies: 0.018379
801000 -- (-2655.169) (-2531.363) [-2455.739] (-2482.922) * (-2512.436) (-2681.043) [-2462.122] (-2468.491) -- 0:09:42
802000 -- (-2661.677) (-2505.346) [-2454.988] (-2485.372) * (-2497.341) (-2664.933) [-2476.061] (-2489.859) -- 0:09:38
803000 -- (-2672.554) (-2511.122) [-2462.380] (-2480.042) * (-2508.716) (-2660.623) [-2466.675] (-2491.191) -- 0:09:36
804000 -- (-2674.173) (-2508.943) [-2452.953] (-2467.795) * (-2496.583) (-2669.671) (-2473.966) [-2491.485] -- 0:09:32
805000 -- (-2671.452) (-2531.099) [-2458.319] (-2473.810) * (-2497.897) (-2661.494) [-2468.175] (-2503.875) -- 0:09:29
Average standard deviation of split frequencies: 0.018075
806000 -- (-2687.518) (-2525.131) (-2466.755) [-2470.136] * (-2501.213) (-2635.938) [-2472.704] (-2517.262) -- 0:09:26
807000 -- (-2689.304) (-2506.888) [-2464.760] (-2462.678) * (-2504.535) (-2633.939) [-2475.704] (-2498.437) -- 0:09:23
808000 -- (-2695.118) (-2491.927) [-2464.535] (-2488.635) * [-2485.439] (-2649.361) (-2477.391) (-2496.645) -- 0:09:20
809000 -- (-2676.920) (-2487.941) [-2475.701] (-2496.127) * (-2482.411) (-2668.896) [-2484.106] (-2509.649) -- 0:09:17
810000 -- (-2667.999) (-2492.999) (-2478.961) [-2478.834] * (-2477.719) (-2671.120) [-2490.781] (-2513.984) -- 0:09:14
Average standard deviation of split frequencies: 0.017837
811000 -- (-2672.232) (-2513.688) [-2479.603] (-2476.222) * (-2490.990) (-2652.949) [-2482.252] (-2500.711) -- 0:09:12
812000 -- (-2679.439) (-2516.684) (-2475.241) [-2477.893] * (-2497.630) (-2637.593) (-2490.717) [-2477.500] -- 0:09:09
813000 -- (-2688.470) (-2510.192) [-2473.867] (-2488.907) * (-2499.540) (-2668.857) [-2482.767] (-2468.085) -- 0:09:06
814000 -- (-2699.260) (-2493.796) [-2469.126] (-2503.255) * [-2474.250] (-2681.094) (-2500.212) (-2488.481) -- 0:09:03
815000 -- (-2685.429) (-2488.130) (-2476.220) [-2483.996] * [-2473.529] (-2673.539) (-2474.796) (-2509.713) -- 0:09:00
Average standard deviation of split frequencies: 0.017771
816000 -- (-2698.299) (-2506.393) (-2478.252) [-2476.253] * [-2467.942] (-2667.851) (-2477.787) (-2500.008) -- 0:08:57
817000 -- (-2685.693) (-2487.604) (-2476.547) [-2479.742] * [-2467.243] (-2651.878) (-2475.786) (-2489.462) -- 0:08:54
818000 -- (-2690.599) (-2485.811) (-2459.593) [-2471.629] * [-2461.234] (-2666.800) (-2489.188) (-2474.904) -- 0:08:51
819000 -- (-2663.914) (-2487.245) [-2460.902] (-2492.343) * [-2465.331] (-2683.806) (-2492.152) (-2484.021) -- 0:08:48
820000 -- (-2661.538) (-2476.143) [-2473.615] (-2486.550) * [-2456.170] (-2681.322) (-2483.702) (-2502.277) -- 0:08:45
Average standard deviation of split frequencies: 0.017923
821000 -- (-2666.084) [-2479.771] (-2488.989) (-2487.961) * [-2463.345] (-2672.763) (-2496.141) (-2506.151) -- 0:08:42
822000 -- (-2657.785) (-2482.871) (-2481.803) [-2490.617] * [-2456.395] (-2677.649) (-2500.959) (-2491.759) -- 0:08:39
823000 -- (-2663.694) (-2472.974) (-2509.785) [-2486.666] * [-2453.273] (-2696.614) (-2479.874) (-2494.790) -- 0:08:36
824000 -- (-2676.142) (-2490.446) (-2486.216) [-2478.640] * (-2462.696) (-2681.781) (-2475.480) [-2480.693] -- 0:08:33
825000 -- (-2669.953) (-2494.272) [-2471.094] (-2497.048) * [-2458.106] (-2685.519) (-2479.685) (-2484.998) -- 0:08:30
Average standard deviation of split frequencies: 0.017820
826000 -- (-2674.549) (-2508.268) [-2483.073] (-2490.529) * [-2464.367] (-2680.520) (-2489.039) (-2489.252) -- 0:08:27
827000 -- (-2671.145) (-2512.429) [-2470.471] (-2476.718) * (-2448.417) (-2667.036) (-2487.719) [-2477.518] -- 0:08:24
828000 -- (-2666.732) (-2510.227) [-2472.684] (-2476.466) * [-2458.301] (-2669.443) (-2487.109) (-2494.138) -- 0:08:21
829000 -- (-2667.075) (-2507.616) [-2480.969] (-2496.056) * [-2461.075] (-2681.248) (-2478.104) (-2516.073) -- 0:08:18
830000 -- (-2660.721) (-2506.661) [-2467.263] (-2478.308) * [-2464.569] (-2679.848) (-2488.704) (-2500.104) -- 0:08:15
Average standard deviation of split frequencies: 0.018444
831000 -- (-2669.419) (-2505.780) (-2468.527) [-2464.724] * (-2473.188) (-2678.776) [-2469.404] (-2505.424) -- 0:08:12
832000 -- (-2674.702) (-2504.656) (-2474.219) [-2493.288] * (-2477.541) (-2691.456) [-2465.024] (-2497.006) -- 0:08:09
833000 -- (-2669.672) (-2499.726) (-2487.546) [-2473.937] * [-2474.625] (-2675.976) (-2469.471) (-2493.371) -- 0:08:06
834000 -- (-2657.968) (-2487.894) (-2479.501) [-2470.199] * (-2487.602) (-2687.783) [-2483.564] (-2492.690) -- 0:08:03
835000 -- (-2675.664) (-2501.286) (-2492.858) [-2467.598] * (-2494.065) (-2692.125) (-2470.734) [-2476.094] -- 0:08:00
Average standard deviation of split frequencies: 0.018133
836000 -- (-2690.684) (-2502.114) (-2487.463) [-2466.246] * [-2478.463] (-2679.807) (-2482.005) (-2484.365) -- 0:07:57
837000 -- (-2690.309) (-2498.598) [-2478.939] (-2480.303) * [-2483.237] (-2690.784) (-2505.956) (-2486.740) -- 0:07:54
838000 -- (-2693.073) (-2503.440) [-2478.795] (-2480.854) * [-2466.518] (-2657.006) (-2491.099) (-2471.252) -- 0:07:51
839000 -- (-2665.321) (-2502.318) (-2485.995) [-2481.762] * (-2484.166) (-2663.703) [-2480.977] (-2476.654) -- 0:07:48
840000 -- (-2680.581) (-2506.260) [-2469.434] (-2473.202) * [-2466.399] (-2655.526) (-2479.725) (-2479.851) -- 0:07:45
Average standard deviation of split frequencies: 0.018383
841000 -- (-2680.726) (-2515.547) [-2459.280] (-2471.350) * [-2460.527] (-2659.029) (-2470.784) (-2495.722) -- 0:07:42
842000 -- (-2670.266) (-2515.574) [-2467.611] (-2463.833) * (-2467.453) (-2641.435) [-2466.293] (-2497.123) -- 0:07:39
843000 -- (-2680.623) (-2508.113) (-2478.886) [-2456.448] * (-2471.560) (-2655.127) [-2464.887] (-2503.573) -- 0:07:36
844000 -- (-2678.474) (-2490.404) (-2476.179) [-2469.524] * (-2467.248) (-2639.916) [-2469.934] (-2497.246) -- 0:07:33
845000 -- (-2669.981) (-2484.312) [-2473.897] (-2483.734) * [-2448.262] (-2643.075) (-2488.673) (-2491.330) -- 0:07:30
Average standard deviation of split frequencies: 0.018435
846000 -- (-2666.579) (-2488.632) [-2470.962] (-2490.416) * [-2453.990] (-2656.833) (-2507.270) (-2485.449) -- 0:07:27
847000 -- (-2653.844) (-2486.462) [-2472.043] (-2493.145) * [-2450.689] (-2672.353) (-2503.476) (-2483.220) -- 0:07:24
848000 -- (-2661.867) (-2491.696) [-2474.207] (-2494.157) * [-2444.068] (-2674.086) (-2511.115) (-2473.000) -- 0:07:21
849000 -- (-2671.569) (-2501.505) [-2472.720] (-2485.917) * [-2446.775] (-2682.771) (-2498.453) (-2489.958) -- 0:07:18
850000 -- (-2669.451) (-2499.712) [-2481.144] (-2481.303) * [-2450.153] (-2695.541) (-2500.064) (-2489.426) -- 0:07:15
Average standard deviation of split frequencies: 0.018574
851000 -- (-2664.959) (-2499.699) (-2483.537) [-2477.239] * [-2450.674] (-2689.331) (-2500.437) (-2492.237) -- 0:07:12
852000 -- (-2662.813) [-2472.533] (-2506.102) (-2472.040) * [-2455.849] (-2688.462) (-2500.644) (-2492.524) -- 0:07:09
853000 -- (-2683.715) (-2480.082) (-2510.542) [-2470.448] * [-2449.664] (-2681.326) (-2467.390) (-2484.106) -- 0:07:07
854000 -- (-2660.862) [-2454.045] (-2487.408) (-2487.389) * (-2459.576) (-2688.161) [-2471.095] (-2510.040) -- 0:07:04
855000 -- (-2650.026) [-2454.626] (-2488.460) (-2470.854) * (-2449.154) (-2666.193) [-2461.762] (-2501.464) -- 0:07:01
Average standard deviation of split frequencies: 0.018697
856000 -- (-2666.627) [-2456.513] (-2498.374) (-2480.359) * [-2467.155] (-2678.894) (-2481.901) (-2485.594) -- 0:06:58
857000 -- (-2657.973) [-2457.965] (-2491.648) (-2481.177) * [-2460.919] (-2686.452) (-2474.692) (-2502.615) -- 0:06:55
858000 -- (-2645.116) [-2459.854] (-2488.090) (-2471.839) * (-2475.188) (-2684.730) [-2468.928] (-2499.791) -- 0:06:52
859000 -- (-2660.587) [-2460.241] (-2483.602) (-2477.480) * (-2469.587) (-2685.983) [-2460.997] (-2482.611) -- 0:06:49
860000 -- (-2655.131) [-2464.775] (-2476.194) (-2474.442) * (-2465.502) (-2673.143) [-2459.542] (-2486.512) -- 0:06:46
Average standard deviation of split frequencies: 0.019190
861000 -- (-2642.780) [-2457.091] (-2491.495) (-2472.054) * [-2454.481] (-2674.860) (-2483.255) (-2491.303) -- 0:06:43
862000 -- (-2666.974) [-2468.763] (-2509.144) (-2476.026) * [-2455.854] (-2673.170) (-2463.307) (-2511.433) -- 0:06:40
863000 -- (-2649.929) (-2483.386) (-2478.572) [-2474.187] * [-2457.328] (-2663.221) (-2465.742) (-2496.614) -- 0:06:37
864000 -- (-2649.512) (-2487.517) (-2500.801) [-2468.384] * [-2461.583] (-2671.527) (-2470.704) (-2498.603) -- 0:06:34
865000 -- (-2680.175) (-2491.427) [-2484.424] (-2478.013) * (-2465.137) (-2677.619) [-2461.704] (-2475.967) -- 0:06:31
Average standard deviation of split frequencies: 0.019151
866000 -- (-2658.266) (-2493.421) (-2469.295) [-2475.779] * [-2466.434] (-2670.755) (-2457.687) (-2470.454) -- 0:06:28
867000 -- (-2672.442) [-2470.546] (-2470.086) (-2481.377) * [-2453.257] (-2672.950) (-2461.322) (-2474.707) -- 0:06:25
868000 -- (-2675.436) (-2462.416) [-2459.191] (-2496.869) * (-2465.544) (-2670.272) [-2462.898] (-2495.028) -- 0:06:22
869000 -- (-2681.082) (-2469.189) [-2459.412] (-2497.406) * [-2455.859] (-2665.049) (-2474.492) (-2497.827) -- 0:06:20
870000 -- (-2677.240) (-2486.038) [-2464.653] (-2500.248) * [-2467.032] (-2667.268) (-2476.832) (-2507.988) -- 0:06:17
Average standard deviation of split frequencies: 0.019341
871000 -- (-2675.708) (-2479.300) [-2464.601] (-2499.645) * (-2495.627) (-2663.599) (-2475.894) [-2493.819] -- 0:06:14
872000 -- (-2659.065) [-2466.436] (-2463.833) (-2485.062) * (-2494.500) (-2657.765) [-2479.092] (-2480.141) -- 0:06:11
873000 -- (-2670.134) [-2460.438] (-2498.134) (-2490.337) * (-2489.704) (-2658.780) (-2489.620) [-2473.361] -- 0:06:08
874000 -- (-2675.911) [-2468.615] (-2494.950) (-2482.001) * [-2469.529] (-2671.186) (-2492.001) (-2474.299) -- 0:06:05
875000 -- (-2691.093) (-2479.366) [-2461.660] (-2479.148) * [-2470.253] (-2657.241) (-2478.747) (-2465.845) -- 0:06:03
Average standard deviation of split frequencies: 0.019264
876000 -- (-2681.329) (-2477.442) [-2453.305] (-2479.510) * (-2480.508) (-2666.474) [-2474.770] (-2486.950) -- 0:06:00
877000 -- (-2668.418) [-2469.870] (-2456.135) (-2488.977) * (-2473.232) (-2670.108) [-2469.804] (-2475.349) -- 0:05:57
878000 -- (-2681.287) (-2481.750) [-2457.979] (-2499.694) * (-2472.722) (-2673.472) (-2502.768) [-2469.059] -- 0:05:54
879000 -- (-2674.464) (-2495.253) [-2458.933] (-2477.740) * (-2467.254) (-2675.783) (-2514.115) [-2474.771] -- 0:05:51
880000 -- (-2673.829) [-2480.533] (-2455.832) (-2485.646) * [-2452.574] (-2668.043) (-2502.844) (-2459.199) -- 0:05:49
Average standard deviation of split frequencies: 0.019399
881000 -- (-2659.924) (-2479.051) [-2453.234] (-2496.557) * [-2461.778] (-2672.105) (-2507.434) (-2481.870) -- 0:05:46
882000 -- (-2666.861) (-2486.654) [-2473.645] (-2489.829) * (-2457.484) (-2666.561) (-2489.241) [-2472.608] -- 0:05:43
883000 -- (-2668.380) (-2488.025) [-2488.104] (-2494.940) * [-2458.268] (-2679.524) (-2485.986) (-2476.757) -- 0:05:40
884000 -- (-2668.741) [-2473.714] (-2469.771) (-2499.360) * (-2471.739) (-2677.201) (-2474.977) [-2454.531] -- 0:05:37
885000 -- (-2678.514) [-2473.606] (-2478.121) (-2497.327) * [-2467.466] (-2693.381) (-2477.585) (-2469.219) -- 0:05:34
Average standard deviation of split frequencies: 0.019385
886000 -- (-2680.095) [-2464.292] (-2486.368) (-2498.231) * [-2463.038] (-2669.593) (-2494.910) (-2469.661) -- 0:05:31
887000 -- (-2674.725) [-2465.826] (-2475.697) (-2510.336) * [-2470.469] (-2658.577) (-2486.868) (-2470.618) -- 0:05:28
888000 -- (-2678.018) [-2458.549] (-2471.624) (-2498.499) * (-2486.129) (-2685.492) [-2479.014] (-2478.151) -- 0:05:25
889000 -- (-2673.373) [-2447.592] (-2482.977) (-2503.734) * (-2488.697) (-2664.246) [-2497.862] (-2485.010) -- 0:05:22
890000 -- (-2670.512) [-2455.098] (-2484.768) (-2491.446) * (-2492.995) (-2680.929) [-2471.376] (-2475.361) -- 0:05:19
Average standard deviation of split frequencies: 0.019551
891000 -- (-2681.674) [-2451.392] (-2490.616) (-2485.825) * (-2489.829) (-2653.016) (-2465.700) [-2469.526] -- 0:05:16
892000 -- (-2661.918) (-2454.418) (-2472.449) [-2464.316] * (-2510.018) (-2653.515) [-2462.342] (-2480.729) -- 0:05:13
893000 -- (-2685.587) (-2460.785) (-2483.609) [-2464.997] * (-2495.692) (-2673.586) [-2462.459] (-2480.869) -- 0:05:10
894000 -- (-2659.118) (-2459.736) [-2472.556] (-2482.063) * (-2484.489) (-2673.176) [-2474.406] (-2500.870) -- 0:05:07
895000 -- (-2674.734) [-2473.032] (-2476.791) (-2487.792) * (-2479.384) (-2655.198) [-2473.231] (-2489.778) -- 0:05:05
Average standard deviation of split frequencies: 0.019422
896000 -- (-2664.889) [-2459.313] (-2498.027) (-2485.085) * (-2498.283) (-2655.232) [-2464.336] (-2491.678) -- 0:05:02
897000 -- (-2667.221) [-2463.307] (-2490.859) (-2501.607) * (-2502.980) (-2652.055) [-2465.909] (-2487.862) -- 0:04:59
898000 -- (-2658.261) [-2485.707] (-2497.592) (-2485.232) * [-2475.903] (-2658.273) (-2467.667) (-2482.333) -- 0:04:56
899000 -- (-2667.123) (-2482.185) [-2487.987] (-2482.659) * (-2461.067) (-2650.556) [-2470.125] (-2482.962) -- 0:04:53
900000 -- (-2661.819) [-2480.898] (-2480.156) (-2503.561) * (-2492.251) (-2656.198) (-2484.019) [-2469.874] -- 0:04:50
Average standard deviation of split frequencies: 0.019244
901000 -- (-2658.420) [-2477.683] (-2493.487) (-2478.713) * (-2473.724) (-2657.132) [-2473.736] (-2488.295) -- 0:04:47
902000 -- (-2683.241) (-2484.988) (-2485.769) [-2482.415] * (-2488.691) (-2664.568) [-2472.790] (-2490.481) -- 0:04:44
903000 -- (-2658.493) [-2484.149] (-2467.354) (-2485.927) * [-2470.040] (-2666.923) (-2486.141) (-2484.883) -- 0:04:41
904000 -- (-2642.564) (-2503.544) [-2464.090] (-2494.404) * (-2463.931) (-2653.655) [-2472.320] (-2476.305) -- 0:04:38
905000 -- (-2643.767) (-2519.934) (-2455.107) [-2486.554] * [-2461.880] (-2673.432) (-2458.235) (-2484.614) -- 0:04:35
Average standard deviation of split frequencies: 0.019144
906000 -- (-2642.835) (-2517.181) [-2466.891] (-2497.122) * [-2473.120] (-2671.358) (-2471.596) (-2511.536) -- 0:04:32
907000 -- (-2657.561) (-2505.201) [-2473.273] (-2491.653) * [-2462.891] (-2666.100) (-2478.487) (-2474.877) -- 0:04:29
908000 -- (-2647.424) (-2491.260) [-2473.318] (-2507.396) * [-2466.682] (-2655.051) (-2495.072) (-2488.778) -- 0:04:26
909000 -- (-2647.969) (-2481.457) [-2466.978] (-2500.746) * [-2468.230] (-2662.566) (-2485.314) (-2480.270) -- 0:04:24
910000 -- (-2651.078) (-2484.662) [-2459.531] (-2502.714) * [-2467.172] (-2658.759) (-2477.143) (-2478.165) -- 0:04:21
Average standard deviation of split frequencies: 0.018723
911000 -- (-2671.838) [-2476.936] (-2469.316) (-2503.835) * (-2485.502) (-2661.836) [-2463.554] (-2498.386) -- 0:04:18
912000 -- (-2658.118) (-2477.778) [-2462.967] (-2514.537) * (-2478.056) (-2672.145) [-2470.507] (-2503.932) -- 0:04:15
913000 -- (-2667.916) (-2488.601) [-2452.867] (-2490.666) * [-2469.923] (-2681.884) (-2478.729) (-2496.843) -- 0:04:12
914000 -- (-2650.559) (-2491.757) [-2462.797] (-2471.409) * [-2463.474] (-2685.069) (-2467.303) (-2494.573) -- 0:04:09
915000 -- (-2650.483) (-2492.052) (-2470.842) [-2469.822] * (-2475.528) (-2655.887) [-2469.047] (-2493.631) -- 0:04:07
Average standard deviation of split frequencies: 0.018903
916000 -- (-2666.417) (-2522.375) [-2463.632] (-2468.737) * (-2479.072) (-2659.936) [-2464.343] (-2488.928) -- 0:04:04
917000 -- (-2649.254) (-2532.884) [-2464.049] (-2474.548) * (-2480.985) (-2663.015) [-2467.821] (-2486.325) -- 0:04:01
918000 -- (-2648.056) (-2524.047) [-2453.020] (-2485.858) * (-2458.247) (-2662.876) (-2475.845) [-2482.513] -- 0:03:58
919000 -- (-2663.299) (-2510.873) (-2456.014) [-2480.343] * (-2464.459) (-2640.855) [-2461.966] (-2465.231) -- 0:03:55
920000 -- (-2656.002) (-2525.453) [-2455.578] (-2488.431) * (-2467.849) (-2644.238) (-2479.652) [-2459.588] -- 0:03:52
Average standard deviation of split frequencies: 0.018604
921000 -- (-2647.803) (-2499.322) [-2452.832] (-2491.311) * (-2472.654) (-2656.824) (-2477.892) [-2460.588] -- 0:03:49
922000 -- (-2663.454) (-2504.787) [-2454.775] (-2508.053) * [-2464.516] (-2653.298) (-2488.889) (-2468.434) -- 0:03:46
923000 -- (-2676.047) (-2495.763) [-2455.809] (-2497.493) * [-2454.897] (-2643.798) (-2485.215) (-2481.017) -- 0:03:43
924000 -- (-2674.436) (-2496.663) [-2447.183] (-2487.079) * [-2453.345] (-2652.030) (-2490.953) (-2479.513) -- 0:03:40
925000 -- (-2644.127) (-2506.942) [-2447.485] (-2494.130) * [-2461.453] (-2660.461) (-2475.099) (-2486.876) -- 0:03:37
Average standard deviation of split frequencies: 0.018710
926000 -- (-2654.492) (-2503.321) [-2438.148] (-2500.980) * (-2462.837) (-2664.243) [-2478.539] (-2487.517) -- 0:03:34
927000 -- (-2661.532) (-2504.727) [-2449.516] (-2497.490) * [-2465.975] (-2661.520) (-2467.807) (-2502.036) -- 0:03:31
928000 -- (-2648.988) (-2501.577) (-2450.118) [-2469.506] * [-2453.411] (-2663.715) (-2480.092) (-2501.347) -- 0:03:28
929000 -- (-2639.561) (-2513.988) (-2458.976) [-2479.561] * [-2469.274] (-2659.467) (-2482.018) (-2487.047) -- 0:03:26
930000 -- (-2663.200) (-2497.282) (-2471.920) [-2460.552] * [-2479.687] (-2657.122) (-2476.625) (-2491.541) -- 0:03:23
Average standard deviation of split frequencies: 0.018573
931000 -- (-2660.922) (-2503.978) (-2467.919) [-2478.728] * (-2472.182) (-2639.248) [-2472.402] (-2486.588) -- 0:03:20
932000 -- (-2664.030) (-2509.429) [-2468.322] (-2480.531) * (-2479.487) (-2647.025) [-2474.516] (-2494.147) -- 0:03:17
933000 -- (-2668.114) (-2496.356) [-2464.121] (-2481.010) * (-2477.166) (-2652.077) (-2482.150) [-2468.374] -- 0:03:14
934000 -- (-2671.736) (-2474.587) (-2458.494) [-2472.982] * [-2466.209] (-2642.923) (-2476.994) (-2472.017) -- 0:03:11
935000 -- (-2661.969) (-2489.813) [-2465.296] (-2482.371) * (-2472.486) (-2641.671) [-2465.118] (-2471.721) -- 0:03:08
Average standard deviation of split frequencies: 0.018335
936000 -- (-2673.585) (-2481.371) [-2465.797] (-2483.031) * (-2468.066) (-2650.508) (-2486.160) [-2473.896] -- 0:03:05
937000 -- (-2667.734) (-2483.117) [-2465.544] (-2471.129) * (-2478.708) (-2665.345) (-2484.668) [-2458.839] -- 0:03:02
938000 -- (-2669.501) (-2477.813) [-2471.057] (-2467.151) * [-2461.978] (-2665.612) (-2499.005) (-2471.633) -- 0:02:59
939000 -- (-2667.091) (-2480.676) (-2480.499) [-2479.277] * [-2461.551] (-2658.728) (-2505.320) (-2477.122) -- 0:02:56
940000 -- (-2668.990) (-2492.817) [-2487.532] (-2475.225) * (-2462.439) (-2650.006) (-2530.906) [-2486.275] -- 0:02:54
Average standard deviation of split frequencies: 0.017874
941000 -- (-2673.909) (-2498.453) (-2487.123) [-2472.289] * [-2455.888] (-2650.313) (-2507.346) (-2492.649) -- 0:02:51
942000 -- (-2676.139) [-2484.731] (-2493.845) (-2479.213) * (-2477.100) (-2661.011) (-2505.159) [-2486.428] -- 0:02:48
943000 -- (-2661.388) (-2481.594) (-2495.255) [-2474.942] * [-2471.782] (-2660.647) (-2523.888) (-2477.174) -- 0:02:45
944000 -- (-2669.101) [-2475.298] (-2490.702) (-2477.945) * [-2470.330] (-2669.439) (-2522.887) (-2483.458) -- 0:02:42
945000 -- (-2668.376) [-2478.331] (-2507.584) (-2476.975) * [-2475.425] (-2675.288) (-2508.446) (-2477.783) -- 0:02:39
Average standard deviation of split frequencies: 0.017643
946000 -- (-2665.996) (-2481.675) (-2518.310) [-2477.995] * [-2468.770] (-2663.809) (-2522.587) (-2482.939) -- 0:02:36
947000 -- (-2681.830) [-2487.241] (-2517.275) (-2472.022) * [-2465.532] (-2660.001) (-2532.007) (-2482.366) -- 0:02:33
948000 -- (-2668.236) [-2478.226] (-2498.288) (-2474.917) * (-2475.292) (-2647.506) (-2512.020) [-2463.815] -- 0:02:30
949000 -- (-2696.756) [-2463.316] (-2502.643) (-2485.146) * [-2457.842] (-2648.330) (-2502.082) (-2481.247) -- 0:02:27
950000 -- (-2689.648) [-2482.363] (-2510.838) (-2483.740) * [-2472.588] (-2650.844) (-2517.614) (-2479.025) -- 0:02:24
Average standard deviation of split frequencies: 0.017279
951000 -- (-2671.016) (-2493.054) (-2521.050) [-2482.482] * [-2479.597] (-2656.840) (-2519.187) (-2463.557) -- 0:02:21
952000 -- (-2684.061) (-2501.325) (-2494.295) [-2469.442] * (-2473.826) (-2669.910) (-2523.699) [-2472.531] -- 0:02:19
953000 -- (-2671.188) [-2496.437] (-2491.293) (-2472.856) * (-2458.488) (-2663.652) (-2520.202) [-2468.366] -- 0:02:16
954000 -- (-2648.002) (-2496.656) (-2519.685) [-2474.794] * [-2466.139] (-2646.125) (-2499.442) (-2489.145) -- 0:02:13
955000 -- (-2651.094) (-2485.595) (-2507.721) [-2483.341] * (-2477.444) (-2643.478) (-2524.495) [-2476.293] -- 0:02:10
Average standard deviation of split frequencies: 0.016982
956000 -- (-2666.751) (-2479.358) (-2518.063) [-2474.740] * [-2481.609] (-2649.452) (-2503.176) (-2466.384) -- 0:02:07
957000 -- (-2668.818) (-2465.227) (-2510.477) [-2463.188] * (-2481.240) (-2655.964) (-2511.307) [-2452.812] -- 0:02:04
958000 -- (-2663.850) [-2478.399] (-2521.066) (-2463.496) * (-2461.230) (-2672.065) (-2506.590) [-2449.371] -- 0:02:01
959000 -- (-2659.860) (-2464.380) (-2510.717) [-2468.932] * [-2449.342] (-2666.007) (-2492.122) (-2457.631) -- 0:01:58
960000 -- (-2650.605) (-2465.632) (-2510.245) [-2483.705] * [-2461.702] (-2664.953) (-2493.285) (-2470.313) -- 0:01:55
Average standard deviation of split frequencies: 0.016768
961000 -- (-2653.081) [-2476.880] (-2488.902) (-2476.187) * [-2459.950] (-2663.301) (-2499.752) (-2481.603) -- 0:01:52
962000 -- (-2668.274) [-2464.770] (-2498.405) (-2482.745) * [-2464.519] (-2664.426) (-2482.705) (-2493.585) -- 0:01:49
963000 -- (-2656.734) (-2469.081) (-2514.456) [-2472.089] * [-2465.581] (-2652.240) (-2483.811) (-2480.955) -- 0:01:47
964000 -- (-2667.538) [-2458.289] (-2529.709) (-2484.473) * [-2454.597] (-2642.637) (-2480.985) (-2487.909) -- 0:01:44
965000 -- (-2655.587) [-2457.323] (-2501.230) (-2474.177) * [-2460.063] (-2661.918) (-2471.393) (-2495.618) -- 0:01:41
Average standard deviation of split frequencies: 0.016878
966000 -- (-2663.595) [-2472.680] (-2530.946) (-2479.488) * [-2465.764] (-2656.384) (-2488.954) (-2479.365) -- 0:01:38
967000 -- (-2695.739) (-2484.700) (-2524.480) [-2483.000] * [-2467.562] (-2675.618) (-2501.647) (-2477.812) -- 0:01:35
968000 -- (-2678.850) [-2476.020] (-2519.916) (-2465.958) * [-2457.246] (-2638.628) (-2487.442) (-2482.415) -- 0:01:32
969000 -- (-2658.974) (-2480.552) (-2511.668) [-2469.285] * [-2454.453] (-2676.239) (-2505.347) (-2476.041) -- 0:01:29
970000 -- (-2659.376) [-2471.381] (-2511.146) (-2496.235) * [-2453.992] (-2663.330) (-2500.971) (-2475.253) -- 0:01:26
Average standard deviation of split frequencies: 0.016708
971000 -- (-2668.538) (-2483.359) (-2516.367) [-2488.118] * (-2472.669) (-2670.146) (-2489.604) [-2486.156] -- 0:01:23
972000 -- (-2664.306) (-2485.683) (-2514.180) [-2463.094] * (-2476.997) (-2667.842) [-2474.083] (-2493.068) -- 0:01:20
973000 -- (-2665.837) [-2461.701] (-2499.138) (-2473.842) * (-2472.829) (-2657.694) [-2465.290] (-2514.298) -- 0:01:18
974000 -- (-2682.338) [-2461.681] (-2483.216) (-2470.721) * (-2473.622) (-2656.094) [-2471.853] (-2510.156) -- 0:01:15
975000 -- (-2661.914) [-2461.652] (-2496.968) (-2496.103) * (-2463.329) (-2671.279) [-2467.621] (-2496.827) -- 0:01:12
Average standard deviation of split frequencies: 0.016216
976000 -- (-2666.383) [-2460.607] (-2473.217) (-2486.024) * [-2456.590] (-2655.828) (-2465.240) (-2486.321) -- 0:01:09
977000 -- (-2674.609) (-2470.841) [-2465.852] (-2484.097) * [-2456.094] (-2661.129) (-2459.888) (-2489.551) -- 0:01:06
978000 -- (-2678.405) (-2476.331) [-2471.364] (-2493.246) * (-2459.702) (-2654.768) [-2452.792] (-2470.800) -- 0:01:03
979000 -- (-2671.843) (-2484.675) [-2474.496] (-2489.178) * (-2461.375) (-2677.941) (-2463.756) [-2466.575] -- 0:01:00
980000 -- (-2662.953) (-2482.264) [-2472.472] (-2492.594) * [-2459.408] (-2673.641) (-2480.515) (-2479.669) -- 0:00:57
Average standard deviation of split frequencies: 0.016133
981000 -- (-2661.529) (-2478.458) [-2461.000] (-2483.691) * (-2487.908) (-2676.269) [-2472.761] (-2490.620) -- 0:00:55
982000 -- (-2676.969) [-2478.841] (-2486.278) (-2495.388) * [-2463.089] (-2670.805) (-2490.864) (-2468.674) -- 0:00:52
983000 -- (-2672.523) (-2479.649) [-2462.686] (-2486.317) * [-2475.993] (-2686.028) (-2471.798) (-2486.688) -- 0:00:49
984000 -- (-2675.385) (-2501.191) [-2458.306] (-2483.280) * [-2486.391] (-2689.360) (-2477.156) (-2495.874) -- 0:00:46
985000 -- (-2665.207) (-2503.670) [-2469.203] (-2472.864) * (-2464.123) (-2683.409) [-2474.016] (-2483.625) -- 0:00:43
Average standard deviation of split frequencies: 0.015882
986000 -- (-2665.448) [-2465.897] (-2466.148) (-2503.990) * (-2467.263) (-2677.252) [-2475.075] (-2470.803) -- 0:00:40
987000 -- (-2672.168) (-2482.315) [-2454.928] (-2503.229) * (-2474.309) (-2662.565) (-2476.717) [-2459.513] -- 0:00:37
988000 -- (-2673.312) [-2469.837] (-2464.065) (-2508.004) * (-2476.244) (-2663.577) (-2471.951) [-2456.575] -- 0:00:34
989000 -- (-2649.289) [-2472.119] (-2464.237) (-2504.388) * (-2466.397) (-2674.866) (-2498.243) [-2457.232] -- 0:00:31
990000 -- (-2669.459) (-2483.570) [-2460.255] (-2504.052) * [-2459.855] (-2662.522) (-2501.861) (-2475.031) -- 0:00:28
Average standard deviation of split frequencies: 0.015738
991000 -- (-2676.699) (-2492.021) [-2476.727] (-2501.321) * [-2457.218] (-2665.446) (-2473.177) (-2476.625) -- 0:00:26
992000 -- (-2687.182) (-2480.349) [-2473.552] (-2493.854) * [-2452.053] (-2662.076) (-2472.371) (-2480.001) -- 0:00:23
993000 -- (-2673.731) (-2503.698) [-2479.481] (-2514.898) * [-2464.586] (-2671.232) (-2466.615) (-2475.820) -- 0:00:20
994000 -- (-2678.777) (-2503.416) [-2472.773] (-2499.813) * (-2463.522) (-2661.894) (-2477.957) [-2465.641] -- 0:00:17
995000 -- (-2667.470) (-2510.809) (-2472.772) [-2483.967] * [-2464.839] (-2673.267) (-2491.578) (-2483.577) -- 0:00:14
Average standard deviation of split frequencies: 0.015736
996000 -- (-2659.326) (-2520.950) [-2460.031] (-2487.963) * [-2462.781] (-2684.164) (-2510.903) (-2479.133) -- 0:00:11
997000 -- (-2664.636) (-2510.734) [-2455.252] (-2486.226) * (-2466.557) (-2674.533) (-2506.859) [-2476.668] -- 0:00:08
998000 -- (-2657.207) (-2524.872) [-2457.811] (-2472.533) * [-2452.908] (-2650.681) (-2513.818) (-2472.650) -- 0:00:05
999000 -- (-2657.232) (-2511.387) [-2454.896] (-2480.687) * (-2474.689) (-2678.044) (-2523.618) [-2466.642] -- 0:00:02
1000000 -- (-2655.010) (-2510.322) [-2450.959] (-2476.635) * [-2469.897] (-2677.660) (-2536.052) (-2470.447) -- 0:00:00
Average standard deviation of split frequencies: 0.015499
Analysis completed in 48 mins 12 seconds
Analysis used 2888.27 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -2430.88
Likelihood of best state for "cold" chain of run 2 was -2432.71
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
48.5 % ( 43 %) Dirichlet(Revmat{all})
63.3 % ( 58 %) Slider(Revmat{all})
25.7 % ( 22 %) Dirichlet(Pi{all})
27.5 % ( 27 %) Slider(Pi{all})
63.3 % ( 39 %) Multiplier(Alpha{1,2})
57.7 % ( 26 %) Multiplier(Alpha{3})
74.0 % ( 57 %) Slider(Pinvar{all})
71.5 % ( 77 %) ExtSPR(Tau{all},V{all})
65.8 % ( 62 %) ExtTBR(Tau{all},V{all})
77.9 % ( 75 %) NNI(Tau{all},V{all})
49.8 % ( 39 %) ParsSPR(Tau{all},V{all})
27.5 % ( 26 %) Multiplier(V{all})
78.0 % ( 77 %) Nodeslider(V{all})
25.4 % ( 26 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
48.1 % ( 37 %) Dirichlet(Revmat{all})
63.6 % ( 48 %) Slider(Revmat{all})
25.2 % ( 22 %) Dirichlet(Pi{all})
27.5 % ( 24 %) Slider(Pi{all})
63.6 % ( 35 %) Multiplier(Alpha{1,2})
57.5 % ( 43 %) Multiplier(Alpha{3})
74.8 % ( 50 %) Slider(Pinvar{all})
71.0 % ( 69 %) ExtSPR(Tau{all},V{all})
65.5 % ( 61 %) ExtTBR(Tau{all},V{all})
78.0 % ( 69 %) NNI(Tau{all},V{all})
49.9 % ( 57 %) ParsSPR(Tau{all},V{all})
27.5 % ( 23 %) Multiplier(V{all})
78.1 % ( 70 %) Nodeslider(V{all})
25.2 % ( 30 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.16 0.00 0.00
2 | 166264 0.17 0.00
3 | 166437 167158 0.00
4 | 166711 166655 166775
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.16 0.01 0.00
2 | 166953 0.17 0.00
3 | 166878 166302 0.00
4 | 166389 166445 167033
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -2454.91
| 1 2 |
| 1 |
| 1 2 1 1 |
|222 * 1 1 1 22 1 |
| 1 2 1 2 2 2 1 2|
|1 2 2 2 * 1 11 * 12 2 2 122 1 2 2 |
| 12 2 22* * 22 1 2 2 1 12 *21 221|
| 1 2 1 1 * 1 1 22 1 2 1 1 2 1 |
| 1 22 21 2 1 2 2 |
| 1 1 2 2 2 1 * 1 |
| 1 1 2 |
| 2 1 1 1 211 11 |
| 2 1 |
| |
| 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -2480.74
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2441.68 -2497.81
2 -2447.72 -2493.32
--------------------------------------
TOTAL -2442.37 -2497.13
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.200444 0.000402 0.161944 0.240371 0.199442 1252.02 1252.55 1.000
r(A<->C){all} 0.101836 0.000767 0.049926 0.155487 0.100234 602.62 609.91 1.001
r(A<->G){all} 0.175133 0.001169 0.109705 0.241111 0.172726 593.78 612.61 1.004
r(A<->T){all} 0.034125 0.000175 0.011477 0.059801 0.032159 430.78 508.66 1.002
r(C<->G){all} 0.047030 0.000418 0.012344 0.088585 0.044115 244.97 363.61 1.000
r(C<->T){all} 0.488563 0.002035 0.400294 0.576514 0.489883 364.15 402.36 1.001
r(G<->T){all} 0.153314 0.000678 0.104726 0.203477 0.152218 648.01 651.19 1.000
pi(A){all} 0.238652 0.000181 0.212862 0.265168 0.238472 914.85 977.12 1.001
pi(C){all} 0.178626 0.000138 0.156252 0.200949 0.178714 966.16 971.65 1.001
pi(G){all} 0.235820 0.000188 0.210070 0.264051 0.235396 866.87 869.25 1.002
pi(T){all} 0.346901 0.000223 0.318465 0.377501 0.346695 837.63 870.04 1.002
alpha{1,2} 0.490063 0.217054 0.001517 1.406086 0.359743 665.96 753.23 1.003
alpha{3} 1.529536 0.932239 0.267205 3.415733 1.288047 801.88 810.50 1.000
pinvar{all} 0.282558 0.021271 0.005540 0.520293 0.286966 423.47 533.76 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C34
2 -- C65
3 -- C619
4 -- C295
5 -- C192
6 -- C196
7 -- C325
8 -- C93
9 -- C597
10 -- C206
11 -- C208
12 -- C606
13 -- C331
14 -- C75
15 -- C231
16 -- C651
17 -- C230
18 -- C220
19 -- C337
20 -- C90
21 -- C72
22 -- C507
23 -- C545
24 -- C224
25 -- C344
26 -- C87
27 -- C228
28 -- C132
29 -- C531
30 -- C236
31 -- C350
32 -- C16
33 -- C366
34 -- C571
35 -- C13
36 -- C555
37 -- C248
38 -- C356
39 -- C99
40 -- C504
41 -- C252
42 -- C579
43 -- C260
44 -- C362
45 -- C60
46 -- C105
47 -- C642
48 -- C312
49 -- C603
50 -- C272
51 -- C368
52 -- C111
53 -- C182
54 -- C628
55 -- C627
56 -- C389
57 -- C284
58 -- C374
59 -- C117
60 -- C326
61 -- C97
62 -- C317
63 -- C552
64 -- C380
65 -- C123
66 -- C68
67 -- C648
68 -- C165
69 -- C427
70 -- C351
71 -- C572
72 -- C385
73 -- C129
74 -- C315
75 -- C493
76 -- C381
77 -- C584
78 -- C561
79 -- C391
80 -- C135
81 -- C465
82 -- C559
83 -- C411
84 -- C596
85 -- C397
86 -- C141
87 -- C615
88 -- C625
89 -- C575
90 -- C441
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
--------------------------------------------------------------------------------
1 -- .**********************************************************************
2 -- .*.....................................................................
3 -- ..*....................................................................
4 -- ...*...................................................................
5 -- ....*..................................................................
6 -- .....*.................................................................
7 -- ......*................................................................
8 -- .......*...............................................................
9 -- ........*..............................................................
10 -- .........*.............................................................
11 -- ..........*............................................................
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14 -- .............*.........................................................
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16 -- ...............*.......................................................
17 -- ................*......................................................
18 -- .................*.....................................................
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20 -- ...................*...................................................
21 -- ....................*..................................................
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25 -- ........................*..............................................
26 -- .........................*.............................................
27 -- ..........................*............................................
28 -- ...........................*...........................................
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30 -- .............................*.........................................
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32 -- ...............................*.......................................
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35 -- ..................................*....................................
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44 -- ...........................................*...........................
45 -- ............................................*..........................
46 -- .............................................*.........................
47 -- ..............................................*........................
48 -- ...............................................*.......................
49 -- ................................................*......................
50 -- .................................................*.....................
51 -- ..................................................*....................
52 -- ...................................................*...................
53 -- ....................................................*..................
54 -- .....................................................*.................
55 -- ......................................................*................
56 -- .......................................................*...............
57 -- ........................................................*..............
58 -- .........................................................*.............
59 -- ..........................................................*............
60 -- ...........................................................*...........
61 -- ............................................................*..........
62 -- .............................................................*.........
63 -- ..............................................................*........
64 -- ...............................................................*.......
65 -- ................................................................*......
66 -- .................................................................*.....
67 -- ..................................................................*....
68 -- ...................................................................*...
69 -- ....................................................................*..
70 -- .....................................................................*.
71 -- ......................................................................*
72 -- .......................................................................
73 -- .......................................................................
74 -- .......................................................................
75 -- .......................................................................
76 -- .......................................................................
77 -- .......................................................................
78 -- .......................................................................
79 -- .......................................................................
80 -- .......................................................................
81 -- .......................................................................
82 -- .......................................................................
83 -- .......................................................................
84 -- .......................................................................
85 -- .......................................................................
86 -- .......................................................................
87 -- .......................................................................
88 -- .......................................................................
89 -- .......................................................................
90 -- .......................................................................
91 -- .....*.............................................*...................
92 -- .............*................................*........................
93 -- ...............................*..................................*....
94 -- ..........*.......................*.......................*............
95 -- .....*....*.............*......*..*................*......*.....*.*....
96 -- ...................*.....*............*................................
97 -- ...............................*................................*.*....
98 -- ........................................................*..............
99 -- ...*...................*...........*........................*..........
100 -- ......*....................................................*...*.......
101 -- .....*....*.............*.........*................*......*............
102 -- .......................................................*...............
103 -- ......**....*.....*.......*...*.*....*.....*......*......*.*.*.*.....*.
104 -- .....***..*.*.....*.....*.*...***.*..*.....*......**.....***.*.**.*..*.
105 -- ......*.....*.....*...........*.*....*.....*......*......*.*.*.*.....*.
106 -- ......**....*.....*.......*...*.*....*.....*......*......*.*.*.*.....*.
107 -- .*...***..*.**....*.....*.*...***.*..*.....*.**...***....***.*.**.*..*.
108 -- .*...***..*.**....*.....*.*...***.*..*.....*.**...***....***.*.**.*..*.
109 -- ........................................*...*..........................
110 -- .................*.....................*................*..............
111 -- ......*........................................................*.......
112 -- .......................................................................
113 -- .......................................*................*..............
114 -- ...............................*.......................................
115 -- ..................................*.......................*............
116 -- ...............................*..................................*....
117 -- ..........*.............*.........*.......................*............
118 -- ...................*.....*.............................................
119 -- .......*..................*............................................
120 -- .........................*............*................................
121 -- ...................*..................*................................
122 -- ..........*...............................................*............
123 -- ..........*.......................*....................................
124 -- ..................................................................*....
125 -- ...........................................................*...*.......
126 -- ......*....................................................*...........
127 -- .....*....*.......................*................*......*............
128 -- .....*..................*..........................*...................
129 -- ......*.....*.....*.......*...*.*....*.....*......*......*.*.*.*.....*.
130 -- .*...***..*.**....*.....*.*...***.*..*.....*.**...***....***.*.**.*..*.
131 -- .*...***..*.**....*.....*.*...***.*..*.....*.**...***....***.*.**.*..*.
132 -- ......**....*.....*...........*.*....*.....*......*......*.*.*.*.....*.
133 -- .................*.....................*....*...........*..............
134 -- .................*.....................*...............................
135 -- .................*......................................*..............
136 -- .............*...............................**........................
137 -- .*...........*...............................**.....*..................
138 -- ...*...............................*........................*..........
139 -- ...*........................................................*..........
140 -- ............................................................*..........
141 -- ...*...................*...............................................
142 -- .*...........................................*.........................
143 -- .*.....................................................................
144 -- .*...........*................................*........................
145 -- .......................................................................
146 -- .......................*...........*...................................
147 -- .......................*...........*........................*..........
148 -- ............................................................*..........
149 -- ...*...................*...........*...................................
150 -- ...................................*...................................
151 -- ...*...................*...........*........................*..........
152 -- .......................*...............................................
153 -- ....................................................*..................
154 -- .............*................................*........................
155 -- ...*...................*....................................*..........
156 -- ...................................*...................................
157 -- ...................................*........................*..........
158 -- .....***..*.*....**.....*.*...***.*..*.....*......**.....***.*.**.*..*.
159 -- ...*...................................................................
160 -- ...*...................*...........*........................*..........
161 -- ...*...............................*...................................
162 -- .......................*....................................*..........
163 -- ...*...................................................................
164 -- .............................................*......*..................
165 -- .......................*...............................................
166 -- .............................................*.........................
167 -- .*...***..*.**....*.....*.*...***.*..*.....*.**...**.....***.*.**.*..*.
168 -- .*..................................................*..................
169 -- .............*................................*.....*..................
170 -- .....***..*.*.....*.....*.*...***.*..*.....*......**.....***.*.**.*..*.
171 -- .......................................*....*...........*..............
--------------------------------------------------------------------------------
ID -- Partition (continued)
--------------------------------------------------------------------------------
1 -- *******************
2 -- ...................
3 -- ...................
4 -- ...................
5 -- ...................
6 -- ...................
7 -- ...................
8 -- ...................
9 -- ...................
10 -- ...................
11 -- ...................
12 -- ...................
13 -- ...................
14 -- ...................
15 -- ...................
16 -- ...................
17 -- ...................
18 -- ...................
19 -- ...................
20 -- ...................
21 -- ...................
22 -- ...................
23 -- ...................
24 -- ...................
25 -- ...................
26 -- ...................
27 -- ...................
28 -- ...................
29 -- ...................
30 -- ...................
31 -- ...................
32 -- ...................
33 -- ...................
34 -- ...................
35 -- ...................
36 -- ...................
37 -- ...................
38 -- ...................
39 -- ...................
40 -- ...................
41 -- ...................
42 -- ...................
43 -- ...................
44 -- ...................
45 -- ...................
46 -- ...................
47 -- ...................
48 -- ...................
49 -- ...................
50 -- ...................
51 -- ...................
52 -- ...................
53 -- ...................
54 -- ...................
55 -- ...................
56 -- ...................
57 -- ...................
58 -- ...................
59 -- ...................
60 -- ...................
61 -- ...................
62 -- ...................
63 -- ...................
64 -- ...................
65 -- ...................
66 -- ...................
67 -- ...................
68 -- ...................
69 -- ...................
70 -- ...................
71 -- ...................
72 -- *..................
73 -- .*.................
74 -- ..*................
75 -- ...*...............
76 -- ....*..............
77 -- .....*.............
78 -- ......*............
79 -- .......*...........
80 -- ........*..........
81 -- .........*.........
82 -- ..........*........
83 -- ...........*.......
84 -- ............*......
85 -- .............*.....
86 -- ..............*....
87 -- ...............*...
88 -- ................*..
89 -- .................*.
90 -- ..................*
91 -- ...................
92 -- ...................
93 -- ....*..............
94 -- ...................
95 -- ....*..............
96 -- ...................
97 -- ....*..............
98 -- ..............*....
99 -- ...*..*............
100 -- ...................
101 -- ...................
102 -- .......*...........
103 -- ..*.....*..*.......
104 -- ..*.*...*..*.......
105 -- ..*........*.......
106 -- ..*........*.......
107 -- ***.*...*..**......
108 -- .**.*...*..*.......
109 -- ...................
110 -- ..............*....
111 -- ...................
112 -- *...........*......
113 -- ..............*....
114 -- ....*..............
115 -- ...................
116 -- ...................
117 -- ...................
118 -- ...................
119 -- ...................
120 -- ...................
121 -- ...................
122 -- ...................
123 -- ...................
124 -- ....*..............
125 -- ...................
126 -- ...................
127 -- ...................
128 -- ...................
129 -- ..*........*.......
130 -- .**.*...*..**......
131 -- ***.*...*..*.......
132 -- ..*........*.......
133 -- ..............*....
134 -- ...................
135 -- ..............*....
136 -- ...................
137 -- .*.................
138 -- ...*..*............
139 -- ...................
140 -- ...*...............
141 -- ...................
142 -- ...................
143 -- .*.................
144 -- ...................
145 -- ...*..*............
146 -- ...................
147 -- ...*..*............
148 -- ......*............
149 -- ...*..*............
150 -- ...*...............
151 -- ...*...............
152 -- ......*............
153 -- .*.................
154 -- .*.................
155 -- ...*..*............
156 -- ......*............
157 -- ...................
158 -- ..*.*...*..*.......
159 -- ......*............
160 -- ......*............
161 -- ...................
162 -- ...................
163 -- ...*...............
164 -- ...................
165 -- ...*...............
166 -- .*.................
167 -- .**.*...*..*.......
168 -- ...................
169 -- ...................
170 -- ..*.*......*.......
171 -- ..............*....
--------------------------------------------------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
-----------------------------------------------------------------
91 3002 1.000000 0.000000 1.000000 1.000000 2
92 3002 1.000000 0.000000 1.000000 1.000000 2
93 3002 1.000000 0.000000 1.000000 1.000000 2
94 3002 1.000000 0.000000 1.000000 1.000000 2
95 3002 1.000000 0.000000 1.000000 1.000000 2
96 3001 0.999667 0.000471 0.999334 1.000000 2
97 2998 0.998668 0.000942 0.998001 0.999334 2
98 2969 0.989007 0.005182 0.985343 0.992672 2
99 2895 0.964357 0.000471 0.964024 0.964690 2
100 2794 0.930713 0.031092 0.908728 0.952698 2
101 2518 0.838774 0.009422 0.832112 0.845436 2
102 2509 0.835776 0.067366 0.788141 0.883411 2
103 2503 0.833777 0.031563 0.811459 0.856096 2
104 2501 0.833111 0.000471 0.832778 0.833444 2
105 2466 0.821452 0.048993 0.786809 0.856096 2
106 2438 0.812125 0.026381 0.793471 0.830779 2
107 2359 0.785809 0.005182 0.782145 0.789474 2
108 2353 0.783811 0.014604 0.773484 0.794137 2
109 1731 0.576616 0.156873 0.465690 0.687542 2
110 1340 0.446369 0.053704 0.408394 0.484344 2
111 1112 0.370420 0.015075 0.359760 0.381079 2
112 1053 0.350766 0.028737 0.330446 0.371086 2
113 1053 0.350766 0.010835 0.343105 0.358428 2
114 1041 0.346769 0.024026 0.329780 0.363757 2
115 1032 0.343771 0.007537 0.338441 0.349101 2
116 1022 0.340440 0.013191 0.331113 0.349767 2
117 1012 0.337109 0.000942 0.336442 0.337775 2
118 1005 0.334777 0.007066 0.329780 0.339773 2
119 1001 0.333444 0.024968 0.315789 0.351099 2
120 1000 0.333111 0.004711 0.329780 0.336442 2
121 997 0.332112 0.002355 0.330446 0.333777 2
122 990 0.329780 0.014133 0.319787 0.339773 2
123 980 0.326449 0.006595 0.321785 0.331113 2
124 939 0.312791 0.010835 0.305130 0.320453 2
125 937 0.312125 0.015546 0.301133 0.323118 2
126 936 0.311792 0.001884 0.310460 0.313125 2
127 891 0.296802 0.025910 0.278481 0.315123 2
128 884 0.294470 0.012248 0.285809 0.303131 2
129 856 0.285143 0.021670 0.269820 0.300466 2
130 818 0.272485 0.027323 0.253165 0.291805 2
131 804 0.267821 0.003769 0.265157 0.270486 2
132 784 0.261159 0.013191 0.251832 0.270486 2
133 728 0.242505 0.120599 0.157229 0.327781 2
134 701 0.233511 0.001413 0.232512 0.234510 2
135 617 0.205530 0.018373 0.192538 0.218521 2
136 374 0.124584 0.011306 0.116589 0.132578 2
137 369 0.122918 0.008951 0.116589 0.129247 2
138 369 0.122918 0.015546 0.111925 0.133911 2
139 354 0.117921 0.009422 0.111259 0.124584 2
140 353 0.117588 0.017430 0.105263 0.129913 2
141 351 0.116922 0.004240 0.113924 0.119920 2
142 350 0.116589 0.016017 0.105263 0.127915 2
143 348 0.115923 0.022612 0.099933 0.131912 2
144 344 0.114590 0.013191 0.105263 0.123917 2
145 344 0.114590 0.009422 0.107928 0.121252 2
146 337 0.112258 0.022141 0.096602 0.127915 2
147 336 0.111925 0.000942 0.111259 0.112592 2
148 336 0.111925 0.008480 0.105929 0.117921 2
149 334 0.111259 0.015075 0.100600 0.121919 2
150 334 0.111259 0.000000 0.111259 0.111259 2
151 334 0.111259 0.013191 0.101932 0.120586 2
152 332 0.110593 0.006595 0.105929 0.115256 2
153 326 0.108594 0.012248 0.099933 0.117255 2
154 325 0.108261 0.000471 0.107928 0.108594 2
155 325 0.108261 0.003298 0.105929 0.110593 2
156 323 0.107595 0.008009 0.101932 0.113258 2
157 320 0.106596 0.010364 0.099267 0.113924 2
158 318 0.105929 0.000942 0.105263 0.106596 2
159 317 0.105596 0.000471 0.105263 0.105929 2
160 314 0.104597 0.001884 0.103264 0.105929 2
161 313 0.104264 0.000471 0.103931 0.104597 2
162 312 0.103931 0.010364 0.096602 0.111259 2
163 308 0.102598 0.001884 0.101266 0.103931 2
164 308 0.102598 0.001884 0.101266 0.103931 2
165 305 0.101599 0.016488 0.089940 0.113258 2
166 304 0.101266 0.004711 0.097935 0.104597 2
167 301 0.100266 0.016488 0.088608 0.111925 2
168 297 0.098934 0.002355 0.097268 0.100600 2
169 296 0.098601 0.003769 0.095936 0.101266 2
170 296 0.098601 0.037687 0.071952 0.125250 2
171 276 0.091939 0.041456 0.062625 0.121252 2
-----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
--------------------------------------------------------------------------------------------
length{all}[1] 0.001087 0.000001 0.000000 0.002612 0.000916 1.001 2
length{all}[2] 0.001129 0.000001 0.000065 0.002675 0.000964 1.001 2
length{all}[3] 0.000597 0.000000 0.000000 0.001840 0.000412 1.001 2
length{all}[4] 0.000596 0.000000 0.000000 0.001881 0.000402 1.000 2
length{all}[5] 0.000569 0.000000 0.000000 0.001633 0.000391 1.000 2
length{all}[6] 0.003594 0.000002 0.001081 0.006529 0.003399 1.004 2
length{all}[7] 0.000597 0.000000 0.000000 0.001842 0.000383 1.000 2
length{all}[8] 0.000556 0.000000 0.000000 0.001615 0.000393 1.000 2
length{all}[9] 0.000560 0.000000 0.000000 0.001633 0.000399 1.000 2
length{all}[10] 0.000574 0.000000 0.000000 0.001600 0.000425 1.000 2
length{all}[11] 0.000608 0.000000 0.000000 0.001777 0.000427 1.000 2
length{all}[12] 0.000567 0.000000 0.000000 0.001723 0.000375 1.000 2
length{all}[13] 0.000551 0.000000 0.000001 0.001623 0.000393 1.001 2
length{all}[14] 0.000595 0.000000 0.000000 0.001791 0.000405 1.002 2
length{all}[15] 0.001173 0.000001 0.000024 0.002758 0.000995 1.004 2
length{all}[16] 0.001099 0.000001 0.000047 0.002639 0.000917 1.001 2
length{all}[17] 0.000571 0.000000 0.000000 0.001753 0.000394 1.001 2
length{all}[18] 0.002215 0.000001 0.000024 0.004515 0.002034 1.003 2
length{all}[19] 0.002293 0.000001 0.000304 0.004551 0.002063 1.000 2
length{all}[20] 0.001156 0.000001 0.000013 0.002736 0.000950 1.003 2
length{all}[21] 0.002317 0.000001 0.000480 0.004744 0.002089 1.000 2
length{all}[22] 0.000574 0.000000 0.000001 0.001647 0.000411 1.001 2
length{all}[23] 0.000568 0.000000 0.000000 0.001653 0.000403 1.001 2
length{all}[24] 0.000551 0.000000 0.000000 0.001673 0.000380 1.000 2
length{all}[25] 0.008327 0.000005 0.003982 0.012813 0.008145 1.001 2
length{all}[26] 0.000584 0.000000 0.000000 0.001818 0.000375 1.001 2
length{all}[27] 0.000565 0.000000 0.000000 0.001742 0.000385 1.004 2
length{all}[28] 0.001723 0.000001 0.000281 0.003530 0.001551 1.003 2
length{all}[29] 0.000582 0.000000 0.000000 0.001735 0.000408 1.001 2
length{all}[30] 0.001734 0.000001 0.000235 0.003694 0.001535 1.000 2
length{all}[31] 0.000611 0.000000 0.000001 0.001812 0.000438 1.000 2
length{all}[32] 0.000581 0.000000 0.000000 0.001758 0.000397 1.000 2
length{all}[33] 0.001170 0.000001 0.000039 0.002828 0.000962 1.000 2
length{all}[34] 0.000582 0.000000 0.000000 0.001698 0.000395 1.000 2
length{all}[35] 0.001131 0.000001 0.000053 0.002536 0.000988 1.000 2
length{all}[36] 0.000585 0.000000 0.000000 0.001781 0.000412 1.000 2
length{all}[37] 0.002829 0.000002 0.000641 0.005119 0.002643 1.000 2
length{all}[38] 0.000593 0.000000 0.000000 0.001834 0.000407 1.000 2
length{all}[39] 0.000589 0.000000 0.000000 0.001802 0.000389 1.001 2
length{all}[40] 0.000583 0.000000 0.000000 0.001740 0.000410 1.001 2
length{all}[41] 0.002596 0.000002 0.000520 0.005549 0.002329 1.001 2
length{all}[42] 0.000591 0.000000 0.000000 0.001729 0.000402 1.002 2
length{all}[43] 0.000578 0.000000 0.000000 0.001701 0.000412 1.000 2
length{all}[44] 0.000563 0.000000 0.000000 0.001698 0.000392 1.000 2
length{all}[45] 0.003506 0.000002 0.001166 0.006492 0.003284 1.000 2
length{all}[46] 0.000579 0.000000 0.000002 0.001734 0.000391 1.000 2
length{all}[47] 0.000601 0.000000 0.000000 0.001805 0.000420 1.000 2
length{all}[48] 0.015608 0.000012 0.009346 0.022570 0.015282 1.014 2
length{all}[49] 0.000605 0.000000 0.000001 0.001793 0.000410 1.000 2
length{all}[50] 0.000575 0.000000 0.000000 0.001789 0.000372 1.000 2
length{all}[51] 0.000565 0.000000 0.000000 0.001654 0.000395 1.000 2
length{all}[52] 0.006361 0.000004 0.002718 0.010247 0.006175 1.000 2
length{all}[53] 0.001170 0.000001 0.000061 0.002845 0.000955 1.003 2
length{all}[54] 0.000570 0.000000 0.000000 0.001717 0.000384 1.001 2
length{all}[55] 0.000585 0.000000 0.000001 0.001781 0.000396 1.000 2
length{all}[56] 0.000663 0.000000 0.000000 0.001978 0.000456 1.000 2
length{all}[57] 0.001171 0.000001 0.000033 0.002826 0.000975 1.000 2
length{all}[58] 0.000575 0.000000 0.000000 0.001747 0.000392 1.000 2
length{all}[59] 0.000581 0.000000 0.000000 0.001808 0.000380 1.001 2
length{all}[60] 0.001733 0.000001 0.000169 0.003733 0.001513 1.001 2
length{all}[61] 0.000571 0.000000 0.000001 0.001665 0.000416 1.001 2
length{all}[62] 0.000578 0.000000 0.000000 0.001702 0.000400 1.007 2
length{all}[63] 0.000574 0.000000 0.000000 0.001639 0.000399 1.000 2
length{all}[64] 0.000574 0.000000 0.000001 0.001718 0.000392 1.000 2
length{all}[65] 0.001211 0.000001 0.000049 0.002810 0.001035 1.000 2
length{all}[66] 0.000585 0.000000 0.000000 0.001746 0.000414 1.002 2
length{all}[67] 0.001724 0.000001 0.000239 0.003728 0.001497 1.000 2
length{all}[68] 0.001146 0.000001 0.000029 0.002723 0.000949 1.004 2
length{all}[69] 0.003477 0.000002 0.000930 0.006283 0.003303 1.001 2
length{all}[70] 0.000601 0.000000 0.000001 0.001907 0.000387 1.000 2
length{all}[71] 0.000568 0.000000 0.000000 0.001653 0.000412 1.000 2
length{all}[72] 0.001731 0.000001 0.000218 0.003855 0.001544 1.001 2
length{all}[73] 0.001121 0.000001 0.000038 0.002784 0.000944 1.005 2
length{all}[74] 0.000558 0.000000 0.000001 0.001737 0.000381 1.001 2
length{all}[75] 0.000577 0.000000 0.000000 0.001752 0.000396 1.000 2
length{all}[76] 0.001164 0.000001 0.000021 0.002683 0.001012 1.001 2
length{all}[77] 0.000587 0.000000 0.000000 0.001792 0.000404 1.001 2
length{all}[78] 0.000576 0.000000 0.000000 0.001700 0.000406 1.000 2
length{all}[79] 0.001272 0.000001 0.000024 0.003003 0.001077 1.003 2
length{all}[80] 0.001996 0.000001 0.000220 0.004224 0.001729 1.000 2
length{all}[81] 0.001750 0.000001 0.000187 0.003696 0.001563 1.000 2
length{all}[82] 0.000564 0.000000 0.000000 0.001696 0.000386 1.000 2
length{all}[83] 0.000552 0.000000 0.000001 0.001582 0.000411 1.000 2
length{all}[84] 0.001116 0.000001 0.000044 0.002481 0.000954 1.002 2
length{all}[85] 0.002358 0.000001 0.000513 0.004566 0.002187 1.002 2
length{all}[86] 0.000584 0.000000 0.000000 0.001758 0.000385 1.001 2
length{all}[87] 0.001155 0.000001 0.000055 0.002696 0.001003 1.001 2
length{all}[88] 0.001176 0.000001 0.000018 0.002841 0.000973 1.001 2
length{all}[89] 0.000560 0.000000 0.000000 0.001655 0.000410 1.000 2
length{all}[90] 0.002346 0.000001 0.000372 0.004687 0.002125 1.002 2
length{all}[91] 0.004053 0.000003 0.001176 0.007139 0.003869 1.000 2
length{all}[92] 0.001767 0.000001 0.000198 0.003851 0.001578 1.001 2
length{all}[93] 0.002773 0.000002 0.000801 0.005469 0.002583 1.000 2
length{all}[94] 0.009333 0.000006 0.004847 0.013843 0.009152 1.000 2
length{all}[95] 0.003464 0.000002 0.000732 0.006518 0.003234 1.001 2
length{all}[96] 0.001765 0.000001 0.000232 0.003744 0.001606 1.001 2
length{all}[97] 0.001865 0.000001 0.000156 0.003885 0.001659 1.000 2
length{all}[98] 0.001222 0.000001 0.000035 0.003008 0.000998 1.001 2
length{all}[99] 0.001126 0.000001 0.000040 0.002664 0.000971 1.000 2
length{all}[100] 0.001147 0.000001 0.000026 0.002723 0.000965 1.000 2
length{all}[101] 0.001207 0.000001 0.000019 0.002966 0.000996 1.000 2
length{all}[102] 0.001165 0.000001 0.000037 0.002754 0.001003 1.001 2
length{all}[103] 0.001779 0.000001 0.000122 0.004032 0.001551 1.000 2
length{all}[104] 0.001448 0.000001 0.000014 0.003586 0.001197 1.001 2
length{all}[105] 0.001163 0.000001 0.000020 0.002763 0.000962 1.000 2
length{all}[106] 0.001591 0.000001 0.000022 0.003699 0.001327 1.000 2
length{all}[107] 0.001148 0.000001 0.000021 0.002787 0.000944 1.004 2
length{all}[108] 0.001153 0.000001 0.000008 0.002763 0.000972 1.000 2
length{all}[109] 0.001238 0.000001 0.000014 0.003029 0.001034 1.001 2
length{all}[110] 0.001043 0.000001 0.000003 0.002513 0.000862 1.000 2
length{all}[111] 0.000620 0.000000 0.000001 0.001852 0.000428 1.004 2
length{all}[112] 0.000723 0.000001 0.000001 0.002159 0.000489 1.002 2
length{all}[113] 0.000737 0.000000 0.000000 0.002129 0.000556 1.001 2
length{all}[114] 0.000585 0.000000 0.000001 0.001851 0.000402 0.999 2
length{all}[115] 0.000594 0.000000 0.000002 0.001692 0.000403 1.000 2
length{all}[116] 0.000572 0.000000 0.000000 0.001662 0.000400 1.003 2
length{all}[117] 0.000652 0.000000 0.000002 0.001951 0.000454 1.000 2
length{all}[118] 0.000558 0.000000 0.000000 0.001608 0.000384 0.999 2
length{all}[119] 0.000659 0.000000 0.000001 0.002028 0.000452 1.002 2
length{all}[120] 0.000593 0.000000 0.000001 0.001761 0.000400 0.999 2
length{all}[121] 0.000595 0.000000 0.000000 0.001795 0.000401 1.001 2
length{all}[122] 0.000586 0.000000 0.000001 0.001815 0.000396 1.001 2
length{all}[123] 0.000589 0.000000 0.000001 0.001809 0.000421 0.999 2
length{all}[124] 0.000600 0.000000 0.000001 0.001739 0.000402 1.000 2
length{all}[125] 0.000634 0.000000 0.000001 0.002001 0.000434 1.003 2
length{all}[126] 0.000631 0.000000 0.000000 0.001975 0.000424 0.999 2
length{all}[127] 0.000610 0.000000 0.000002 0.001802 0.000409 0.999 2
length{all}[128] 0.000593 0.000000 0.000001 0.001744 0.000410 0.999 2
length{all}[129] 0.000616 0.000000 0.000000 0.001927 0.000404 0.999 2
length{all}[130] 0.000672 0.000001 0.000001 0.002033 0.000430 1.008 2
length{all}[131] 0.000666 0.000000 0.000000 0.001939 0.000453 1.003 2
length{all}[132] 0.000613 0.000000 0.000001 0.001788 0.000413 1.001 2
length{all}[133] 0.001073 0.000001 0.000043 0.002507 0.000867 1.004 2
length{all}[134] 0.000749 0.000001 0.000002 0.002236 0.000520 0.999 2
length{all}[135] 0.000651 0.000000 0.000001 0.001898 0.000447 1.002 2
length{all}[136] 0.000529 0.000000 0.000005 0.001557 0.000372 1.001 2
length{all}[137] 0.000795 0.000001 0.000003 0.002617 0.000524 0.999 2
length{all}[138] 0.000607 0.000000 0.000000 0.001907 0.000411 0.997 2
length{all}[139] 0.000594 0.000000 0.000001 0.001617 0.000408 0.997 2
length{all}[140] 0.000575 0.000000 0.000003 0.001569 0.000423 0.998 2
length{all}[141] 0.000588 0.000000 0.000003 0.001715 0.000445 0.998 2
length{all}[142] 0.000575 0.000000 0.000008 0.001748 0.000374 0.997 2
length{all}[143] 0.000599 0.000000 0.000002 0.001680 0.000397 1.012 2
length{all}[144] 0.000570 0.000000 0.000003 0.001634 0.000401 1.000 2
length{all}[145] 0.000614 0.000000 0.000002 0.002055 0.000408 0.997 2
length{all}[146] 0.000534 0.000000 0.000000 0.001707 0.000329 0.997 2
length{all}[147] 0.000588 0.000000 0.000002 0.001755 0.000452 0.998 2
length{all}[148] 0.000629 0.000000 0.000000 0.001780 0.000443 1.001 2
length{all}[149] 0.000566 0.000000 0.000001 0.001644 0.000407 1.007 2
length{all}[150] 0.000598 0.000000 0.000001 0.001777 0.000395 1.000 2
length{all}[151] 0.000563 0.000000 0.000003 0.001665 0.000381 1.005 2
length{all}[152] 0.000556 0.000000 0.000002 0.001648 0.000423 1.007 2
length{all}[153] 0.000643 0.000000 0.000001 0.002010 0.000407 0.998 2
length{all}[154] 0.000604 0.000000 0.000001 0.001944 0.000425 0.998 2
length{all}[155] 0.000583 0.000000 0.000000 0.001831 0.000366 1.008 2
length{all}[156] 0.000555 0.000000 0.000001 0.001549 0.000406 0.997 2
length{all}[157] 0.000602 0.000000 0.000004 0.001663 0.000420 0.997 2
length{all}[158] 0.001915 0.000001 0.000256 0.004279 0.001670 1.014 2
length{all}[159] 0.000603 0.000000 0.000000 0.001758 0.000405 0.997 2
length{all}[160] 0.000577 0.000000 0.000001 0.001806 0.000371 1.005 2
length{all}[161] 0.000582 0.000000 0.000001 0.001638 0.000445 0.997 2
length{all}[162] 0.000597 0.000000 0.000004 0.001645 0.000420 0.999 2
length{all}[163] 0.000527 0.000000 0.000001 0.001651 0.000368 0.997 2
length{all}[164] 0.000562 0.000000 0.000000 0.001428 0.000447 1.003 2
length{all}[165] 0.000595 0.000000 0.000010 0.001756 0.000371 1.002 2
length{all}[166] 0.000570 0.000000 0.000005 0.001640 0.000388 1.023 2
length{all}[167] 0.000599 0.000000 0.000001 0.001619 0.000413 0.999 2
length{all}[168] 0.000610 0.000000 0.000001 0.001927 0.000420 0.997 2
length{all}[169] 0.000603 0.000000 0.000002 0.001718 0.000450 0.997 2
length{all}[170] 0.001753 0.000001 0.000031 0.003779 0.001533 1.005 2
length{all}[171] 0.000837 0.000001 0.000003 0.002414 0.000639 1.007 2
--------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.015499
Maximum standard deviation of split frequencies = 0.156873
Average PSRF for parameter values (excluding NA and >10.0) = 1.001
Maximum PSRF for parameter values = 1.023
Clade credibility values:
/--------------------------------------------------------------------- C34 (1)
|
|--------------------------------------------------------------------- C619 (3)
|
|--------------------------------------------------------------------- C192 (5)
|
|--------------------------------------------------------------------- C597 (9)
|
|--------------------------------------------------------------------- C206 (10)
|
|--------------------------------------------------------------------- C606 (12)
|
|--------------------------------------------------------------------- C231 (15)
|
|--------------------------------------------------------------------- C651 (16)
|
|--------------------------------------------------------------------- C230 (17)
|
|--------------------------------------------------------------------- C220 (18)
|
|--------------------------------------------------------------------- C72 (21)
|
|--------------------------------------------------------------------- C507 (22)
|
|--------------------------------------------------------------------- C545 (23)
|
|--------------------------------------------------------------------- C132 (28)
|
|--------------------------------------------------------------------- C531 (29)
|
|--------------------------------------------------------------------- C236 (30)
|
|--------------------------------------------------------------------- C571 (34)
|
|--------------------------------------------------------------------- C248 (37)
|
|--------------------------------------------------------------------- C504 (40)
|
|--------------------------------------------------------------------- C579 (42)
|
|--------------------------------------------------------------------- C260 (43)
|
|--------------------------------------------------------------------- C312 (48)
|
|--------------------------------------------------------------------- C603 (49)
|
|--------------------------------------------------------------------- C272 (50)
|
|--------------------------------------------------------------------- C628 (54)
|
|--------------------------------------------------------------------- C627 (55)
|
|--------------------------------------------------------------------- C552 (63)
|
|--------------------------------------------------------------------- C68 (66)
|
|--------------------------------------------------------------------- C165 (68)
|
|--------------------------------------------------------------------- C427 (69)
|
|--------------------------------------------------------------------- C572 (71)
|
|--------------------------------------------------------------------- C584 (77)
|
|--------------------------------------------------------------------- C465 (81)
|
|--------------------------------------------------------------------- C559 (82)
|
|--------------------------------------------------------------------- C397 (85)
|
|--------------------------------------------------------------------- C615 (87)
|
|--------------------------------------------------------------------- C625 (88)
|
|--------------------------------------------------------------------- C575 (89)
|
|--------------------------------------------------------------------- C441 (90)
|
| /--------- C90 (20)
| |
|----------------------------100----------------------------+--------- C87 (26)
| |
| \--------- C99 (39)
|
| /--------- C284 (57)
|-----------------------------99----------------------------+
| \--------- C141 (86)
|
| /--------- C295 (4)
+ |
| |--------- C224 (24)
| |
| |--------- C555 (36)
|-----------------------------96----------------------------+
| |--------- C97 (61)
| |
| |--------- C493 (75)
| |
| \--------- C561 (78)
|
| /--------- C389 (56)
|-----------------------------84----------------------------+
| \--------- C391 (79)
|
| /---------------------------------------------------- C65 (2)
| |
| | /--------- C196 (6)
| | /--100--+
| | | \--------- C111 (52)
| | |
| | | /--------- C208 (11)
| | | |
| | /---84---+--100--+--------- C13 (35)
| | | | |
| | | | \--------- C117 (59)
| | | |
| | | \----------------- C344 (25)
| | /-------100------+
| | | | /--------- C16 (32)
| | | | |
| | | | /--100--+--------- C648 (67)
| | | | | |
| | | \---100--+ \--------- C381 (76)
| | | |
| | | \----------------- C123 (65)
| | |
| | | /--------- C325 (7)
| | | |
| | | /---93--+--------- C326 (60)
| | | | |
| | | | \--------- C380 (64)
| | | |
| | | |----------------- C331 (13)
| | | |
| | | |----------------- C337 (19)
| | | |
| |---83---+ |----------------- C350 (31)
| /---78--+ | |
| | | | |----------------- C366 (33)
| | | | |
| | | | |----------------- C356 (38)
| | | | /---82---+
| | | | | |----------------- C362 (44)
| | | | | |
| | | | | |----------------- C368 (51)
| | | | | |
| | | | | |----------------- C374 (58)
| | | | | |
| | | | | |----------------- C317 (62)
| | | | | |
| | | | /---81--+ |----------------- C351 (70)
| | | | | | |
| | | | | | |----------------- C315 (74)
| | | | | | |
| | | | | | \----------------- C411 (83)
| | | \---83---+ |
|---79---+ | | |-------------------------- C93 (8)
| | | | |
| | | | \-------------------------- C228 (27)
| | | |
| | | \---------------------------------- C135 (80)
| | |
| | | /--------- C75 (14)
| | |--------------------100-------------------+
| | | \--------- C642 (47)
| | |
| | |---------------------------------------------------- C105 (46)
| | |
| | |---------------------------------------------------- C182 (53)
| | |
| | \---------------------------------------------------- C129 (73)
| |
| |------------------------------------------------------------ C385 (72)
| |
| \------------------------------------------------------------ C596 (84)
|
| /--------- C252 (41)
\-----------------------------58----------------------------+
\--------- C60 (45)
Phylogram (based on average branch lengths):
/---- C34 (1)
|
|-- C619 (3)
|
|-- C192 (5)
|
|-- C597 (9)
|
|-- C206 (10)
|
|- C606 (12)
|
|---- C231 (15)
|
|---- C651 (16)
|
|-- C230 (17)
|
|-------- C220 (18)
|
|-------- C72 (21)
|
|-- C507 (22)
|
|-- C545 (23)
|
|------ C132 (28)
|
|-- C531 (29)
|
|------ C236 (30)
|
|-- C571 (34)
|
|---------- C248 (37)
|
|-- C504 (40)
|
|-- C579 (42)
|
|-- C260 (43)
|
|------------------------------------------------------------- C312 (48)
|
|-- C603 (49)
|
|- C272 (50)
|
|-- C628 (54)
|
|-- C627 (55)
|
|-- C552 (63)
|
|-- C68 (66)
|
|---- C165 (68)
|
|------------- C427 (69)
|
|-- C572 (71)
|
|-- C584 (77)
|
|------ C465 (81)
|
|-- C559 (82)
|
|--------- C397 (85)
|
|---- C615 (87)
|
|---- C625 (88)
|
|-- C575 (89)
|
|-------- C441 (90)
|
| /---- C90 (20)
| |
|-----+-- C87 (26)
| |
| \-- C99 (39)
|
| /---- C284 (57)
|---+
| \- C141 (86)
|
| /- C295 (4)
+ |
| |- C224 (24)
| |
| |- C555 (36)
|---+
| |-- C97 (61)
| |
| |- C493 (75)
| |
| \- C561 (78)
|
| /-- C389 (56)
|---+
| \---- C391 (79)
|
| /--- C65 (2)
| |
| | /-------------- C196 (6)
| | /--------------+
| | | \------------------------- C111 (52)
| | |
| | | /-- C208 (11)
| | | |
| | /---+-----------------------------------+---- C13 (35)
| | | | |
| | | | \-- C117 (59)
| | | |
| | | \-------------------------------- C344 (25)
| | /------------+
| | | | /-- C16 (32)
| | | | |
| | | | /---------+------ C648 (67)
| | | | | |
| | | \------+ \---- C381 (76)
| | | |
| | | \---- C123 (65)
| | |
| | | /-- C325 (7)
| | | |
| | | /--+------ C326 (60)
| | | | |
| | | | \-- C380 (64)
| | | |
| | | |- C331 (13)
| | | |
| | | |-------- C337 (19)
| | | |
| |---+ |- C350 (31)
| /---+ | |
| | | | |--- C366 (33)
| | | | |
| | | | |- C356 (38)
| | | | /---+
| | | | | |- C362 (44)
| | | | | |
| | | | | |- C368 (51)
| | | | | |
| | | | | |- C374 (58)
| | | | | |
| | | | | |- C317 (62)
| | | | | |
| | | | /----+ |- C351 (70)
| | | | | | |
| | | | | | |- C315 (74)
| | | | | | |
| | | | | | \- C411 (83)
| | | \------+ |
|---+ | | |- C93 (8)
| | | | |
| | | | \- C228 (27)
| | | |
| | | \------ C135 (80)
| | |
| | | /- C75 (14)
| | |-----+
| | | \-- C642 (47)
| | |
| | |- C105 (46)
| | |
| | |--- C182 (53)
| | |
| | \--- C129 (73)
| |
| |------ C385 (72)
| |
| \---- C596 (84)
|
| /--------- C252 (41)
\---+
\------------- C60 (45)
|------------------| 0.005 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
Running FUBAR...
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\
***************** TYPES OF STANDARD ANALYSES *****************
(1) Selection Analyses
(2) Evolutionary Hypothesis Testing
(3) Relative evolutionary rate inference
(4) Coevolutionary analysis
(5) Basic Analyses
(6) Codon Selection Analyses
(7) Compartmentalization
(8) Data File Tools
(9) Miscellaneous
(10) Model Comparison
(11) Kernel Analysis Tools
(12) Molecular Clock
(13) Phylogeny Reconstruction
(14) Positive Selection
(15) Recombination
(16) Selection/Recombination
(17) Relative Rate
(18) Relative Ratio
(19) Substitution Rates
Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' *****************
(1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution).
(2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood).
(3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting).
(4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection).
(5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification).
(6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood).
(7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation).
Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types):
Analysis Description
--------------------
Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a
coding sequence alignment to determine whether some sites have been
subject to pervasive purifying or diversifying selection. v2.1
introduces two more methods for estimating the posterior distribution of
grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation
Bayes approximation (fastest). Please note that a FUBAR analysis
generates a cache and a results JSON file in the same directory as
directory as the original alignment. HyPhy needs to have write
privileges to this directory. For example if the original file is in
/home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there
will also exist FUBAR-generated files
/home/sergei/FUBAR/data/pol.nex.FUBAR.json,
/home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide
checkpointing so that a partially completed analysis can be restarted.
- __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree
(one per partition)
- __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring
selection (2013), Mol Biol Evol. 30(5):1196-205
- __Written by__: Sergei L Kosakovsky Pond
- __Contact Information__: spond@temple.edu
- __Analysis Version__: 2.1
####Choose Genetic Code
1. [**Universal**] Universal code. (Genebank transl_table=1).
2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2).
3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3).
4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4).
5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5).
6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6).
7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9).
8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10).
9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12).
10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13).
11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14).
12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15).
13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16).
14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21).
15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22).
16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23).
17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24).
18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25).
19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26).
>Please choose an option (or press q to cancel selection):
>Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`)
>A tree was found in the data file: `(C34,C619,C192,C597,C206,C606,C231,C651,C230,C220,C72,C507,C545,C132,C531,C236,C571,C248,C504,C579,C260,C312,C603,C272,C628,C627,C552,C68,C165,C427,C572,C584,C465,C559,C397,C615,C625,C575,C441,(C90,C87,C99),(C284,C141),(C295,C224,C555,C97,C493,C561),(C389,C391),((C65,((((C196,C111),(C208,C13,C117),C344),((C16,C648,C381),C123)),((((C325,C326,C380),C331,C337,C350,C366,C356,C362,C368,C374,C317,C351,C315,C411),C93,C228),C135)),(C75,C642),C105,C182,C129),C385,C596),(C252,C60))`
>Would you like to use it (y/n)?
>Loaded a multiple sequence alignment with **90** sequences, **302** codons, and **1** partitions from `/data//pss_subsets/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1.fna`
> FUBAR will write cache and result files to _/data//pss_subsets/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1.fna.FUBAR.json_, respectively
> Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer):
####Posterior estimation method
1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation)
2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed)
3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default)
>Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5):
### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model
* Log(L) = -2388.92, AIC-c = 5012.18 (117 estimated parameters)
* Tree length (expected substitutions/site) for partition 1 : 0.188
### Computing the phylogenetic likelihood function on the grid
* Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid
* Best scaling achieved for
* synonymous rate = 1.227
* non-synonymous rate = 0.571
* Computing conditional site likelihoods on a 20 x 20 rate grid
### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights
* Using the following settings
* Dirichlet alpha : 0.5
### Tabulating site-level results
| Codon | Partition | alpha | beta |Posterior prob for positive selection|
|:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:|
| 120 | 1 | 1.063 | 14.478 | Pos. posterior = 0.9749 |
----
## FUBAR inferred 1 sites subject to diversifying positive selection at posterior probability >= 0.9
Of these, 0.03 are expected to be false positives (95% confidence interval of 0-1 )
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.54 sec, SCORE=1000, Nseq=90, Len=302
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV4 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV06 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV45 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV71 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV0 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV89 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV48 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV61 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV75 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV5 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV19 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV95 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV92 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV96 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV25 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV3 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV97 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV06 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV08 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV31 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV5 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV31 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV51 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV30 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV20 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV37 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV0 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV2 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV07 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV24 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV44 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_mutant2_nsp2_VIPR_ALG4_AST13226_1_8947_9852_1_2015_09_China_Unknown_PEDV7 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV28 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV32 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV31 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV36 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV50 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV6 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV66 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV3 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV55 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV48 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV56 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV9 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV04 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV52 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVMASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV79 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV60 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV62 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV05 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV42 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV12 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV03 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV72 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV68 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV11 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV82 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV28 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV27 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV84 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV74 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV17 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV26 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV7 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV17 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV52 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV80 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV23 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV8 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV65 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV27 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV51 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV72 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV85 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV29 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV15 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV93 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV81 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV84 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV91 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV35 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV65 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV59 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV11 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV96 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTSI
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV97 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTNST
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV41 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV15 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV25 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV41 AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST
************************************:*****:****.*
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV4 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV06 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV45 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV71 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV0 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV89 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV48 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV61 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV75 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV5 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV19 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV95 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV92 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV96 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV25 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV3 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV97 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV06 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV08 IDYDYALSVLRLHNFSISSGNVFLGVVSATMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV31 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV5 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV31 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV51 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV30 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV20 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV37 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV0 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV2 IDYEYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV07 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV24 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV44 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant2_nsp2_VIPR_ALG4_AST13226_1_8947_9852_1_2015_09_China_Unknown_PEDV7 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV28 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV32 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV31 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV36 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPNY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV50 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV6 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV66 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV3 IDYDYALSVLRLHNFSISSGNVFLGVVSATMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV55 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV48 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV56 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV9 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV04 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV52 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVNTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV79 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV60 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV62 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV05 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV42 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV12 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV03 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV72 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV68 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV11 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGSLLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV82 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV28 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV27 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV84 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV74 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV17 IDYDYALSVLRLHNFSISSGNVFLGVVSATMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV26 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV7 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV17 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV52 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV80 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV23 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV8 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV65 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV27 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV51 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV72 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV85 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV29 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV15 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV93 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV81 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV84 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV91 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVKQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV35 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV65 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV59 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV11 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV96 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV97 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV41 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV15 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV25 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV41 IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY
***:***********************..****:******:****:**:*
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV4 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV06 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV45 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV71 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV0 TYRTVKPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV89 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV48 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV61 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV75 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV5 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV19 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV95 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV92 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV96 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV25 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV3 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV97 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV06 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV08 THRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV31 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV5 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV31 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV51 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV30 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV20 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV37 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV0 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV2 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV07 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV24 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV44 TYRTVRPGESFNILVCYDGVAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant2_nsp2_VIPR_ALG4_AST13226_1_8947_9852_1_2015_09_China_Unknown_PEDV7 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV28 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV32 TYRTVRPGESFNILACYDGSAAGVYGVNLRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV31 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV36 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV50 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV6 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV66 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV3 THRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV55 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV48 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV56 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV9 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV04 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV52 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV79 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV60 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV62 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV05 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV42 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV12 TYRTVRPGESFNILACYEGFAAGVYGVNMRSNYTIKGSFIKGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV03 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV72 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV68 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV11 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV82 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV28 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV27 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV84 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINCACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV74 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV17 THRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV26 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV7 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV17 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV52 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV80 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV23 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV8 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV65 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV27 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV51 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV72 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV85 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV29 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV15 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV93 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV81 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV84 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV91 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV35 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV65 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV59 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV11 TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV96 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV97 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV41 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV15 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV25 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV41 TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN
*:***:********.**:* ********:******:****: ********
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV4 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV06 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV45 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV71 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV0 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV89 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV48 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV61 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV75 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV5 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV19 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV95 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV92 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV96 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV25 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV3 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV97 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV06 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV08 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPILQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV31 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV5 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV31 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPILQVEGASSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV51 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV30 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV20 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV37 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV0 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV2 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV07 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV24 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV44 INNGTVEFCYLHQLELGSGCHVGCDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant2_nsp2_VIPR_ALG4_AST13226_1_8947_9852_1_2015_09_China_Unknown_PEDV7 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV28 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV32 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV31 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV36 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV50 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV6 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV66 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV3 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPILQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV55 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV48 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV56 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV9 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV04 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV52 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGAISLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV79 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV60 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV62 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV05 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV42 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV12 INKGTVDFCYLPHLELGSGCHVGSDLNGVMYGGYEDQPTLQVEGPSSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV03 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV72 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV68 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV11 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV82 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV28 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV27 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV84 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV74 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV17 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPILQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV26 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV7 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV17 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV52 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV80 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV23 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV8 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV65 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV27 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV51 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV72 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV85 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV29 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV15 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV93 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV81 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV84 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV91 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV35 INNGTVEFCYLHQLELGSGCHVGSDLDGIMYGGYEDQPTLQVEGASSLFT
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV65 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASILFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV59 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV11 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV96 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV97 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV41 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV15 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV25 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV41 INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT
**:***:**** :**********.**:*:********* *****. ***
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV4 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV06 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV45 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV71 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV0 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV89 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV48 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTIVGNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV61 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV75 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV5 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV19 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV95 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV92 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV96 ENVLAFLYAALINGSTWWLSSARTAVDRFNEWAVHNGMTTVGNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV25 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV3 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV97 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV06 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV08 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV31 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV5 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIF
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV31 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV51 ENVLAFLYAALINGSTWWLSSSRLAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV30 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV20 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV37 ENVWAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGKTDCFSIL
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV0 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV2 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV07 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV24 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV44 ENVLAFLYAALINGSTWWLSSSKIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_mutant2_nsp2_VIPR_ALG4_AST13226_1_8947_9852_1_2015_09_China_Unknown_PEDV7 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV28 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV32 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV31 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV36 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV50 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV6 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV66 ENVLAFLYAALINGSNWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV3 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV55 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV48 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV56 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV9 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV04 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV52 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV79 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV60 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV62 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV05 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV42 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIF
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV12 KNVLAFLYAPLIKGSTGGLISSRIAVNRFNEWAVHKGMTTVFNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV03 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV72 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV68 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV11 ENVLAFLYAALINGSTWWLSSSRTAVDRFNEWAVHNGMTIVGNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV82 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV28 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV27 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV84 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV74 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV17 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV26 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV7 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV17 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV52 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV80 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV23 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV8 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV65 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV27 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV51 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV72 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV85 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV29 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV15 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV93 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV81 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV84 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV91 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV35 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIF
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV65 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV59 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV11 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV96 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV97 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV41 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV15 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV25 ENVLAFLYAALINGSTWWLNSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV41 ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL
:** *****.**:**. * *:: **:********:*** * :******:
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV4 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV06 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV45 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV71 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV0 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV89 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVVRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV48 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV61 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV75 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV5 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV19 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV95 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV92 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV96 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV25 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV3 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV97 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV06 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV08 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV31 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV5 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV31 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV51 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV30 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV20 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV37 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV0 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV2 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV07 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV24 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV44 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant2_nsp2_VIPR_ALG4_AST13226_1_8947_9852_1_2015_09_China_Unknown_PEDV7 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV28 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV32 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV31 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV36 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV50 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV6 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV66 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV3 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV55 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV48 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTIGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV56 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV9 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV04 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV52 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV79 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV60 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV62 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV05 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV42 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV12 AAKTGVDVQRLLASIQSLHKNFGEKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV03 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV72 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV68 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV11 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV82 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSVTDEFTTGEVIRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV28 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV27 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV84 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV74 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV17 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV26 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV7 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV17 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV52 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV80 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV23 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV8 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV65 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV27 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV51 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV72 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV85 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTVEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV29 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV15 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV93 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV81 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV84 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV91 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVVRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV35 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV65 AAKTGVDVQSLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV59 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV11 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV96 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV97 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV41 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV15 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV25 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV41 AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN
********* ************* ********:***** **:*******
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV4 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV06 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV45 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV71 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV0 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV89 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV48 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV61 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV75 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV5 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV19 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV95 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV92 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV96 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV25 LQ
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV3 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV97 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV06 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV08 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV31 LQ
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV5 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV31 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV51 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV30 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV20 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV37 LQ
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV0 LQ
85_7_CH_GDZH02_1401_nsp2_VIPR_ALG4_1012631532_9260_10165_1_2014_01_01_China_Swine_PEDV_nsp2_VIPR_ALG4_AST13135_1_9271_10176_1_2015_09_China_Unknown_PEDV2 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV07 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV24 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV44 LQ
85_7_mutant2_nsp2_VIPR_ALG4_AST13226_1_8947_9852_1_2015_09_China_Unknown_PEDV7 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV28 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV32 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV31 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV36 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV50 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV6 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV66 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV3 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV55 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV48 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV56 LQ
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV9 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV04 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV52 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV79 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV60 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV62 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV05 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV42 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV12 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV03 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV72 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV68 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV11 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV82 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV28 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV27 LQ
13_019349_nsp2_VIPR_ALG4_527290414_9283_10188_1_2013_05_29_USA_Swine_PEDV84 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV74 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV17 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV26 LQ
85_7_mutant3_nsp2_VIPR_ALG4_AST13232_1_9271_10176_1_2015_09_China_Unknown_PEDV7 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV17 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV52 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV80 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV23 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV8 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV65 LQ
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV27 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV51 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV72 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV85 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV29 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV15 LQ
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV93 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV81 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV84 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV91 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV35 LQ
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV65 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV59 LQ
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV11 LQ
85_7_mutant1_nsp2_VIPR_ALG4_AST13220_1_9271_10176_1_2015_09_China_Unknown_PEDV96 LQ
17GXCZ_1ORF3d_nsp2_VIPR_ALG4_QNL15254_1_9284_10189_1_2017_01_China_Swine_PEDV97 LQ
17GXCZ_1ORF3c_nsp2_VIPR_ALG4_QNL15260_1_9284_10189_1_2017_01_China_Swine_PEDV41 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV15 LQ
85_7_A40_nsp2_VIPR_ALG4_AST13129_1_9271_10176_1_2015_09_China_Unknown_PEDV25 LQ
85_7_nsp2_VIPR_ALG4_AST13214_1_9271_10176_1_2013_05_China_Swine_PEDV41 LQ
**
>CHSD2014_nsp2_VIPR_ALG4_AQX36341_1_9284_10189_1_2014_05_12_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Ohio60_2013_nsp2_VIPR_ALG4_658130393_9249_10154_1_2013_11_12_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Minnesota306_2014_nsp2_VIPR_ALG4_825144573_9239_10144_1_2014_04_08_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Minnesota79_2013_nsp2_VIPR_ALG4_658130512_9249_10154_1_2013_11_30_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >CH_SCLS_2018_nsp2_VIPR_ALG4_AZL47221_1_9284_10189_1_2018_01_12_China_Swine_PEDV GCAGGTTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGTCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAAACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAACTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_MEX_JAL_01_2017_nsp2_VIPR_ALG4_AVU05366_1_9114_10019_1_2017_02_10_Mexico_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTGTACGTCAAATGTATGGCGTTAATCTTCAG >ZJCZ4_nsp2_VIPR_ALG4_409898553_9284_10189_1_2011_04_10_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATTTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCATAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACACCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATTCTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGCACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACGGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACTTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAATAGTGGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGCGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Minnesota64_2013_nsp2_VIPR_ALG4_658130414_9249_10154_1_2013_11_19_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACGACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Minnesota84_2013_nsp2_VIPR_ALG4_658130743_9249_10154_1_2013_12_03_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >CH_SCZY103_2017_nsp2_VIPR_ALG4_AZL47215_1_9284_10189_1_2017_12_01_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTCAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_SouthDakota285_2014_nsp2_VIPR_ALG4_825144566_9239_10144_1_2014_04_02_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PC177_nsp2_VIPR_ALG4_893707341_9273_10178_1_2013_12_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACGACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >IBR_6_JPN_2014_nsp2_VIPR_ALG4_948549270_9226_10131_1_2014_05_Japan_Pig_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >IBT_VN_nsp2_VIPR_ALG4_QPX15727_1_9284_10189_1_2018_02_02_Viet_Nam_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCATAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTATACTATTAGAGGCTCATTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTCGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACGTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTGCTAGGACCGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTGGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGCGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTACATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCTTTGACAGATGAGTTTACTACAGGTGAGGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_1776_Badajoz_Alburquerque_nsp2_VIPR_ALG4_QKV43780_1_9288_10193_1_2016_02_12_Spain_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAATAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >COL_Cundinamarca03962_2014_nsp2_VIPR_ALG4_QGQ60245_1_9272_10177_1_2014_03_21_Colombia_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_NorthCarolina66_2013_nsp2_VIPR_ALG4_658130428_9249_10154_1_2013_11_23_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >IWT_4_JPN_2014_nsp2_VIPR_ALG4_948549144_9226_10131_1_2014_04_Japan_Pig_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >JS2008_nsp2_VIPR_ALG4_459357910_9260_10165_1_2008_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCCTCTGGTGTTGTTGAGAAGTGCATAGTCCGTGTTTGCTATGGTAATATGGCTCTCAATGGTCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGATTATGCCCTTTCTGTTTTACGCCTCCATAACTTCTCCATTTCATCTGGGAATGTTTTCCTAGGTGTTGTGAGTGCAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCCATCGCACAGTTAGACCGGGTGAATCTTTTAATATTTTGGCTTGTTATGATGGTGCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTATTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATCGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTGGGCAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACAGGCGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCCCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_1931_3_Burgos_Aranda_de_Duero_nsp2_VIPR_ALG4_QKV43810_1_9288_10193_1_2017_01_19_Spain_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >CH_YNKM_8_2013_nsp2_VIPR_ALG4_575502657_9284_10189_1_2013_09_20_China_Unknown_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTATACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTTTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >KNU_141112_S_DEL2_nsp2_VIPR_ALG4_ASA40090_1_9284_10189_1_2016_01_South_Korea_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTATTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >ZJU_G2_2013_nsp2_VIPR_ALG4_ANY27030_1_9284_10189_1_2013_11_14_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGCTTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >KNU_141112_P10_nsp2_VIPR_ALG4_906851979_9284_10189_1_2014_11_South_Korea_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >KCH_2_JPN_2014_nsp2_VIPR_ALG4_948549368_9226_10131_1_2014_03_Japan_Pig_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_2330_Orense_nsp2_VIPR_ALG4_QKV43840_1_9288_10193_1_2019_01_30_Spain_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGATCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTGGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAAGACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >COL_Cauca_2015_nsp2_VIPR_ALG4_QGQ60335_1_9269_10174_1_2015_05_05_Colombia_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCTATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACTATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAACGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >CH_TP_2_2_2018_nsp2_VIPR_ALG4_QCC26579_1_9284_10189_1_2018_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATTTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGAATATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGTGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Iowa303_2014_nsp2_VIPR_ALG4_825144846_9239_10144_1_2014_04_07_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >KGW_1_JPN_2014_nsp2_VIPR_ALG4_948549221_9226_10131_1_2014_04_Japan_Pig_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACGACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_Belgorod_dom_2008_nsp2_VIPR_ALG4_ASV51727_1_9283_10188_1_NA_Russia_Unknown_PEDV GCTGGTTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGCAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGTCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTCTCTGTTTTACGCCTCCATAACTTTTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACTCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATTTTGGTGTGCTATGATGGTGTTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTTGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCCACCTGGTGGCTTAGTTCCTCTAAGATCGCTGTAGATAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTGGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGCGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >COL_Antioquia10641_2015_nsp2_VIPR_ALG4_QGQ60323_1_9271_10176_1_2015_08_11_Colombia_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACTATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAACGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >KNU_1406_1_nsp2_VIPR_ALG4_692148234_9284_10189_1_2014_03_South_Korea_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >GDS24_nsp2_VIPR_ALG4_QCQ19821_1_9284_10189_1_2012_06_04_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAACGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACCTGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Minnesota200_2014_nsp2_VIPR_ALG4_825144832_9239_10144_1_2014_03_05_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >KNU_1601_nsp2_VIPR_ALG4_ASA69723_1_9284_10189_1_2016_03_South_Korea_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAATTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAAAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_GER_L00857_K14_14_04_2014_nsp2_VIPR_ALG4_SNQ28009_1_9265_10170_1_NA_NA_Unknown_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >AJ1102_F12_nsp2_VIPR_ALG4_QGZ28403_1_9284_10189_1_2011_05_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATTTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCATAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACACCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGCACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACGGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACTTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTGGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGCGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_GER_L01013_K01_15_03_2015_nsp2_VIPR_ALG4_SNQ27886_1_9284_10189_1_NA_NA_Unknown_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTAACTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >AH_M_nsp2_VIPR_ALG4_575502852_9260_10165_1_2011_10_20_China_Unknown_PEDV GCTGGCTTGCGTAAGATGGCACAACCCTCTGGTGTTGTTGAGAAGTGCATAGTCCGTGTTTGCTATGGTAATATGGCTCTCAATGGTCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGATTATGCCCTTTCTGTTTTACGCCTCCATAACTTCTCCATTTCATCTGGGAATGTTTTCCTAGGTGTTGTGAGTGCAACTATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCCATCGCACAGTTAGACCGGGTGAATCTTTTAATATTTTGGCTTGTTATGATGGTGCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTATTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATCGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTGGGCAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACAGGCGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCCCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Minnesota42_2013_nsp2_VIPR_ALG4_658130330_9249_10154_1_2013_10_20_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACGACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >KNU_1807_nsp2_VIPR_ALG4_QBA57557_1_9263_10168_1_2018_03_South_Korea_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTCATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAATAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTACACCTCGTTGACAGATGAGTTTACTATAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_GER_L00926_K20_4_01_2014_nsp2_VIPR_ALG4_SNQ27892_1_9284_10189_1_NA_NA_Unknown_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >COL_ValledelCauca08565_2015_nsp2_VIPR_ALG4_QGQ60305_1_9272_10177_1_2015_07_03_Colombia_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACTATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAACGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Iowa23_57_2013_nsp2_VIPR_ALG4_658130337_9249_10154_1_2013_10_20_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >KNU_1829_nsp2_VIPR_ALG4_QDZ36667_1_9275_10180_1_2018_11_South_Korea_Swine_PEDV GCAGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATGGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCAACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTATTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Minnesota94_2013_nsp2_VIPR_ALG4_658130596_9249_10154_1_2013_12_10_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >KUIDL_PED_2014_007_nsp2_VIPR_ALG4_614790571_9063_9968_1_2014_02_South_Korea_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_GER_L00933_K22_14_05_2014_nsp2_VIPR_ALG4_SNQ28063_1_9284_10189_1_NA_NA_Unknown_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >FJzz1_nsp2_VIPR_ALG4_QAR17955_1_9284_10189_1_2011_05_22_China_Unknown_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >YN60_nsp2_VIPR_ALG4_946526347_9284_10189_1_2014_02_05_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTATACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTTTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_10F_nsp2_VIPR_ALG4_761662529_9284_10189_1_2012_01_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGAGGGTTTTGCAGCTGGGGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAAAGGCTCGTTCATTAAGGGCGCTTGTGGTTCACCGGGTTATAACATTAACAAGGGTACCGTTGATTTTTGCTATTTACCCCACCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAAATGGTGTTATGTATGGGGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCCCTAGTAGTCTGTTTACAAAAAATGTGTTGGCATTTCTTTATGCACCACTCATTAAGGGTTCTACCGGGGGGCTTATTTCTTCTAGGATTGCTGTAAACAGGTTTAATGAGTGGGCTGTTCATAAGGGTATGACAACAGTATTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAAACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGAAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Ohio126_2014_nsp2_VIPR_ALG4_658130708_9249_10154_1_2014_01_29_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >MIE_1_JPN_2014_nsp2_VIPR_ALG4_948549242_9226_10131_1_2014_03_Japan_Pig_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_GER_L01014_K01_15_04_2015_nsp2_VIPR_ALG4_SNQ27948_1_9284_10189_1_NA_NA_Unknown_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >G2_nsp2_VIPR_ALG4_QCT24236_1_9284_10189_1_2016_China_Swine_PEDV GCTGGCCTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTTCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTACTTACACCAGCTCGAACTTGGTTCGGGCTGTCATGTTGGTAGCGACCTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACGTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGACCGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAATAGTGGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGCGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTACATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCTTTGACAGATGAGTTTACTACAGGTGAGGTTATACGTCAAATGTATGGCGTTAATCTTCAG >HUA_14PED96_nsp2_VIPR_ALG4_959945338_9212_10117_1_2014_10_15_Viet_Nam_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGGTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Wisconsin55_2013_nsp2_VIPR_ALG4_658130365_9249_10154_1_2013_11_03_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Texas435_2014_nsp2_VIPR_ALG4_825144895_9239_10144_1_2014_11_18_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >NW8_nsp2_VIPR_ALG4_ATY72311_1_9284_10189_1_2015_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTCTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATTGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_GER_L01059_K07_15_01_2015_nsp2_VIPR_ALG4_SNQ28037_1_9284_10189_1_NA_NA_Unknown_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >GDS09_nsp2_VIPR_ALG4_QCQ20073_1_9284_10189_1_2014_08_01_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCCTCTGGTGTTGTTGAGAAGTGCATAGTCCGTGTTTGCTATGGTAATATGGCTCTCAATGGTCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGATTATGCCCTTTCTGTTTTACGCCTCCATAACTTCTCCATTTCATCTGGGAATGTTTTCCTAGGTGTTGTGAGTGCAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCCATCGCACAGTTAGACCGGGTGAATCTTTTAATATTTTGGCTTGTTATGATGGTGCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTATTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATCGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTGGGCAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACAGGCGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCCCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_1842_2016_ITA_nsp2_VIPR_ALG4_AQY61718_1_9284_10189_1_2016_01_28_Italy_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTAGAGAAGTGCATAGTTCGTGTTTGCTATGGCAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAATAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >COL_ValledelCauca05762_2015_nsp2_VIPR_ALG4_QGQ60269_1_9272_10177_1_2015_05_20_Colombia_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACGACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_1481_Pamplona_Tudela_nsp2_VIPR_ALG4_QKV43738_1_9249_10154_1_2014_06_03_Spain_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Minnesota41_2013_nsp2_VIPR_ALG4_658130323_9249_10154_1_2013_10_14_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_H3_Barcelona_Vic_nsp2_VIPR_ALG4_QKV43846_1_9288_10193_1_2019_01_07_Spain_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAATAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >GDS15_nsp2_VIPR_ALG4_QCQ19971_1_9284_10189_1_2012_07_15_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATTTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCATAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACACCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTGGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGAGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >CH_SXYL_2016_nsp2_VIPR_ALG4_ASY04642_1_9283_10188_1_2016_09_10_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >GD_B_nsp2_VIPR_ALG4_399227062_9284_10189_1_2012_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACGGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >S100_nsp2_VIPR_ALG4_QCO95409_1_9284_10189_1_2018_04_19_South_Korea_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGTCTCCACAATTTCTCCATTTCATCTGGTAATGTTTTCTTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCCAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACTTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_GER_L00862_2014_nsp2_VIPR_ALG4_SNQ28087_1_9249_10154_1_NA_NA_Unknown_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Minnesota82_2013_nsp2_VIPR_ALG4_658130526_9249_10154_1_2013_12_02_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_LYG_nsp2_VIPR_ALG4_761662571_9284_10189_1_2014_03_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGAACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGTTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >GDS21_nsp2_VIPR_ALG4_QCQ19851_1_9284_10189_1_2014_01_09_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGAGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_1453_Zaragoza_Tauste_nsp2_VIPR_ALG4_QKV43720_1_9249_10154_1_2014_04_24_Spain_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Illinois97_2013_nsp2_VIPR_ALG4_658130617_9249_10154_1_2013_12_11_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACGACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_JS_A_nsp2_VIPR_ALG4_AZS18877_1_9284_10189_1_2017_11_10_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATTTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCATAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACACCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGCACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACGGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACTTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTGGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGCGTCGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Missouri177_2014_nsp2_VIPR_ALG4_825144510_9239_10144_1_2014_01_14_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_MEX_JAL_02_2014_nsp2_VIPR_ALG4_AVU05457_1_9114_10019_1_2014_07_19_Mexico_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAAGCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTGTACGTCAAATGTATGGCGTTAATCTTCAG >GDS27_nsp2_VIPR_ALG4_QCQ19905_1_9284_10189_1_2014_06_06_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTATTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTTTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >UNKNOWN_MT843278_nsp2_VIPR_ALG4_QMU85400_1_9285_10190_1_2019_12_China_Unknown_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTATTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAAAGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Minnesota62_2013_nsp2_VIPR_ALG4_658130400_9249_10154_1_2013_11_18_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_ROMANIA_L01329_K25_15_01_2015_nsp2_VIPR_ALG4_SNQ28013_1_9272_10177_1_NA_NA_Unknown_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCAGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTGCTGCAGCTGGTGTTTATGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACATCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGGTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Nebraska348_2014_nsp2_VIPR_ALG4_825144545_9239_10144_1_2014_02_25_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATGTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCATTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >PEDV_MEX_JAL_19_2017_nsp2_VIPR_ALG4_AVU05352_1_9114_10019_1_2017_05_10_Mexico_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTAATAGCACTATAGATTATGATTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATTTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >GDS33_nsp2_VIPR_ALG4_QCQ19899_1_9284_10189_1_2014_07_28_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTCTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAATATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Oklahoma38_2013_nsp2_VIPR_ALG4_658130302_9249_10154_1_2013_09_07_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCCTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >USA_Texas39_2013_nsp2_VIPR_ALG4_658130309_9249_10154_1_2013_09_28_USA_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGTGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAATTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTCTGCATAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG >SNJ_P_nsp2_VIPR_ALG4_QGJ02388_1_9253_10158_1_2018_10_China_Swine_PEDV GCTGGCTTGCGTAAGATGGCACAACCATCTGGTGTTGTTGAGAAGTGCATAGTTCGTGTTTGCTATGGTAATATGGCTCTTAATGGCCTATGGCTTGGTGATACTGTTATCTGCCCACGCCATGTTATAGCGTCTAGTACTACTAGCACTATAGATTATGACTATGCCCTTTCTGTTTTACGCCTCCACAACTTCTCCATTTCATCTGGTAATGTTTTCCTAGGCGTTGTGGGTGTAACCATGCGAGGTGCTTTGTTGCAGATAAAGGTTAATCAAAACAATGTCCACACGCCTAAGTACACCTATCGCACAGTTAGACCGGGTGAATCTTTTAATATCTTGGCGTGCTATGATGGTTCTGCAGCTGGTGTTTACGGCGTTAACATGCGCTCTAATTACACTATTAGAGGCTCGTTCATTAATGGCGCTTGTGGTTCACCTGGTTATAACATTAACAATGGTACCGTTGAGTTTTGCTATTTACACCAGCTTGAACTTGGTTCAGGCTGTCATGTTGGTAGCGACTTAGATGGTGTTATGTATGGTGGTTATGAGGACCAACCTACTTTGCAAGTTGAAGGCGCTAGTAGTCTGTTTACAGAGAATGTGTTGGCATTTCTTTATGCAGCACTCATTAATGGTTCTACCTGGTGGCTTAGTTCTTCTAGGATTGCTGTAGACAGGTTTAATGAGTGGGCTGTTCATAATGGTATGACAACAGTAGTTAATACTGATTGCTTTTCTATTCTTGCTGCTAAGACTGGTGTTGATGTACAACGTTTGTTGGCCTCAATCCAGTCTTTGCACAAGAATTTTGGTGGAAAGCAAATTCTTGGCTATACCTCGTTGACAGATGAGTTTACTACAGGTGAAGTTATACGTCAAATGTATGGCGTTAATCTTCAG
>CHSD2014_nsp2_VIPR_ALG4_AQX36341_1_9284_10189_1_2014_05_12_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Ohio60_2013_nsp2_VIPR_ALG4_658130393_9249_10154_1_2013_11_12_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Minnesota306_2014_nsp2_VIPR_ALG4_825144573_9239_10144_1_2014_04_08_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Minnesota79_2013_nsp2_VIPR_ALG4_658130512_9249_10154_1_2013_11_30_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >CH_SCLS_2018_nsp2_VIPR_ALG4_AZL47221_1_9284_10189_1_2018_01_12_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVKPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_MEX_JAL_01_2017_nsp2_VIPR_ALG4_AVU05366_1_9114_10019_1_2017_02_10_Mexico_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVVRQMYGVN LQ >ZJCZ4_nsp2_VIPR_ALG4_409898553_9284_10189_1_2011_04_10_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTIVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Minnesota64_2013_nsp2_VIPR_ALG4_658130414_9249_10154_1_2013_11_19_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Minnesota84_2013_nsp2_VIPR_ALG4_658130743_9249_10154_1_2013_12_03_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >CH_SCZY103_2017_nsp2_VIPR_ALG4_AZL47215_1_9284_10189_1_2017_12_01_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_SouthDakota285_2014_nsp2_VIPR_ALG4_825144566_9239_10144_1_2014_04_02_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PC177_nsp2_VIPR_ALG4_893707341_9273_10178_1_2013_12_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >IBR_6_JPN_2014_nsp2_VIPR_ALG4_948549270_9226_10131_1_2014_05_Japan_Pig_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >IBT_VN_nsp2_VIPR_ALG4_QPX15727_1_9284_10189_1_2018_02_02_Viet_Nam_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSARTAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_1776_Badajoz_Alburquerque_nsp2_VIPR_ALG4_QKV43780_1_9288_10193_1_2016_02_12_Spain_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >COL_Cundinamarca03962_2014_nsp2_VIPR_ALG4_QGQ60245_1_9272_10177_1_2014_03_21_Colombia_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_NorthCarolina66_2013_nsp2_VIPR_ALG4_658130428_9249_10154_1_2013_11_23_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >IWT_4_JPN_2014_nsp2_VIPR_ALG4_948549144_9226_10131_1_2014_04_Japan_Pig_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >JS2008_nsp2_VIPR_ALG4_459357910_9260_10165_1_2008_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVSATMRGALLQIKVNQNNVHTPKY THRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPILQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_1931_3_Burgos_Aranda_de_Duero_nsp2_VIPR_ALG4_QKV43810_1_9288_10193_1_2017_01_19_Spain_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >CH_YNKM_8_2013_nsp2_VIPR_ALG4_575502657_9284_10189_1_2013_09_20_China_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIF AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >KNU_141112_S_DEL2_nsp2_VIPR_ALG4_ASA40090_1_9284_10189_1_2016_01_South_Korea_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPILQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >ZJU_G2_2013_nsp2_VIPR_ALG4_ANY27030_1_9284_10189_1_2013_11_14_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRLAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >KNU_141112_P10_nsp2_VIPR_ALG4_906851979_9284_10189_1_2014_11_South_Korea_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >KCH_2_JPN_2014_nsp2_VIPR_ALG4_948549368_9226_10131_1_2014_03_Japan_Pig_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_2330_Orense_nsp2_VIPR_ALG4_QKV43840_1_9288_10193_1_2019_01_30_Spain_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVWAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGKTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >COL_Cauca_2015_nsp2_VIPR_ALG4_QGQ60335_1_9269_10174_1_2015_05_05_Colombia_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >CH_TP_2_2_2018_nsp2_VIPR_ALG4_QCC26579_1_9284_10189_1_2018_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYEYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Iowa303_2014_nsp2_VIPR_ALG4_825144846_9239_10144_1_2014_04_07_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >KGW_1_JPN_2014_nsp2_VIPR_ALG4_948549221_9226_10131_1_2014_04_Japan_Pig_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_Belgorod_dom_2008_nsp2_VIPR_ALG4_ASV51727_1_9283_10188_1_NA_Russia_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILVCYDGVAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGCDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSKIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >COL_Antioquia10641_2015_nsp2_VIPR_ALG4_QGQ60323_1_9271_10176_1_2015_08_11_Colombia_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >KNU_1406_1_nsp2_VIPR_ALG4_692148234_9284_10189_1_2014_03_South_Korea_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >GDS24_nsp2_VIPR_ALG4_QCQ19821_1_9284_10189_1_2012_06_04_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNLRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Minnesota200_2014_nsp2_VIPR_ALG4_825144832_9239_10144_1_2014_03_05_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >KNU_1601_nsp2_VIPR_ALG4_ASA69723_1_9284_10189_1_2016_03_South_Korea_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPNY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_GER_L00857_K14_14_04_2014_nsp2_VIPR_ALG4_SNQ28009_1_9265_10170_1_NA_NA_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >AJ1102_F12_nsp2_VIPR_ALG4_QGZ28403_1_9284_10189_1_2011_05_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_GER_L01013_K01_15_03_2015_nsp2_VIPR_ALG4_SNQ27886_1_9284_10189_1_NA_NA_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSNWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >AH_M_nsp2_VIPR_ALG4_575502852_9260_10165_1_2011_10_20_China_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVSATMRGALLQIKVNQNNVHTPKY THRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPILQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Minnesota42_2013_nsp2_VIPR_ALG4_658130330_9249_10154_1_2013_10_20_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >KNU_1807_nsp2_VIPR_ALG4_QBA57557_1_9263_10168_1_2018_03_South_Korea_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTIGEVIRQMYGVN LQ >PEDV_GER_L00926_K20_4_01_2014_nsp2_VIPR_ALG4_SNQ27892_1_9284_10189_1_NA_NA_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >COL_ValledelCauca08565_2015_nsp2_VIPR_ALG4_QGQ60305_1_9272_10177_1_2015_07_03_Colombia_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Iowa23_57_2013_nsp2_VIPR_ALG4_658130337_9249_10154_1_2013_10_20_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >KNU_1829_nsp2_VIPR_ALG4_QDZ36667_1_9275_10180_1_2018_11_South_Korea_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVMASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVNTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGAISLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Minnesota94_2013_nsp2_VIPR_ALG4_658130596_9249_10154_1_2013_12_10_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >KUIDL_PED_2014_007_nsp2_VIPR_ALG4_614790571_9063_9968_1_2014_02_South_Korea_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_GER_L00933_K22_14_05_2014_nsp2_VIPR_ALG4_SNQ28063_1_9284_10189_1_NA_NA_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >FJzz1_nsp2_VIPR_ALG4_QAR17955_1_9284_10189_1_2011_05_22_China_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >YN60_nsp2_VIPR_ALG4_946526347_9284_10189_1_2014_02_05_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIF AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_10F_nsp2_VIPR_ALG4_761662529_9284_10189_1_2012_01_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYEGFAAGVYGVNMRSNYTIKGSFIKGACGSPGYN INKGTVDFCYLPHLELGSGCHVGSDLNGVMYGGYEDQPTLQVEGPSSLFT KNVLAFLYAPLIKGSTGGLISSRIAVNRFNEWAVHKGMTTVFNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGEKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Ohio126_2014_nsp2_VIPR_ALG4_658130708_9249_10154_1_2014_01_29_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >MIE_1_JPN_2014_nsp2_VIPR_ALG4_948549242_9226_10131_1_2014_03_Japan_Pig_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_GER_L01014_K01_15_04_2015_nsp2_VIPR_ALG4_SNQ27948_1_9284_10189_1_NA_NA_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >G2_nsp2_VIPR_ALG4_QCT24236_1_9284_10189_1_2016_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGSLLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRTAVDRFNEWAVHNGMTIVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >HUA_14PED96_nsp2_VIPR_ALG4_959945338_9212_10117_1_2014_10_15_Viet_Nam_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSVTDEFTTGEVIRQMYGVN LQ >USA_Wisconsin55_2013_nsp2_VIPR_ALG4_658130365_9249_10154_1_2013_11_03_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Texas435_2014_nsp2_VIPR_ALG4_825144895_9239_10144_1_2014_11_18_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >NW8_nsp2_VIPR_ALG4_ATY72311_1_9284_10189_1_2015_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINCACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_GER_L01059_K07_15_01_2015_nsp2_VIPR_ALG4_SNQ28037_1_9284_10189_1_NA_NA_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >GDS09_nsp2_VIPR_ALG4_QCQ20073_1_9284_10189_1_2014_08_01_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVSATMRGALLQIKVNQNNVHTPKY THRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPILQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_1842_2016_ITA_nsp2_VIPR_ALG4_AQY61718_1_9284_10189_1_2016_01_28_Italy_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >COL_ValledelCauca05762_2015_nsp2_VIPR_ALG4_QGQ60269_1_9272_10177_1_2015_05_20_Colombia_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_1481_Pamplona_Tudela_nsp2_VIPR_ALG4_QKV43738_1_9249_10154_1_2014_06_03_Spain_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Minnesota41_2013_nsp2_VIPR_ALG4_658130323_9249_10154_1_2013_10_14_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_H3_Barcelona_Vic_nsp2_VIPR_ALG4_QKV43846_1_9288_10193_1_2019_01_07_Spain_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >GDS15_nsp2_VIPR_ALG4_QCQ19971_1_9284_10189_1_2012_07_15_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >CH_SXYL_2016_nsp2_VIPR_ALG4_ASY04642_1_9283_10188_1_2016_09_10_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >GD_B_nsp2_VIPR_ALG4_399227062_9284_10189_1_2012_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >S100_nsp2_VIPR_ALG4_QCO95409_1_9284_10189_1_2018_04_19_South_Korea_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_GER_L00862_2014_nsp2_VIPR_ALG4_SNQ28087_1_9249_10154_1_NA_NA_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Minnesota82_2013_nsp2_VIPR_ALG4_658130526_9249_10154_1_2013_12_02_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_LYG_nsp2_VIPR_ALG4_761662571_9284_10189_1_2014_03_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTVEVIRQMYGVN LQ >GDS21_nsp2_VIPR_ALG4_QCQ19851_1_9284_10189_1_2014_01_09_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_1453_Zaragoza_Tauste_nsp2_VIPR_ALG4_QKV43720_1_9249_10154_1_2014_04_24_Spain_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Illinois97_2013_nsp2_VIPR_ALG4_658130617_9249_10154_1_2013_12_11_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_JS_A_nsp2_VIPR_ALG4_AZS18877_1_9284_10189_1_2017_11_10_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Missouri177_2014_nsp2_VIPR_ALG4_825144510_9239_10144_1_2014_01_14_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_MEX_JAL_02_2014_nsp2_VIPR_ALG4_AVU05457_1_9114_10019_1_2014_07_19_Mexico_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVKQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVVRQMYGVN LQ >GDS27_nsp2_VIPR_ALG4_QCQ19905_1_9284_10189_1_2014_06_06_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGIMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIF AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >UNKNOWN_MT843278_nsp2_VIPR_ALG4_QMU85400_1_9285_10190_1_2019_12_China_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASILFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQSLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Minnesota62_2013_nsp2_VIPR_ALG4_658130400_9249_10154_1_2013_11_18_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_ROMANIA_L01329_K25_15_01_2015_nsp2_VIPR_ALG4_SNQ28013_1_9272_10177_1_NA_NA_Unknown_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGAAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVGNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Nebraska348_2014_nsp2_VIPR_ALG4_825144545_9239_10144_1_2014_02_25_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVMCPRHVIASSTTSI IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >PEDV_MEX_JAL_19_2017_nsp2_VIPR_ALG4_AVU05352_1_9114_10019_1_2017_05_10_Mexico_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTNST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >GDS33_nsp2_VIPR_ALG4_QCQ19899_1_9284_10189_1_2014_07_28_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Oklahoma38_2013_nsp2_VIPR_ALG4_658130302_9249_10154_1_2013_09_07_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >USA_Texas39_2013_nsp2_VIPR_ALG4_658130309_9249_10154_1_2013_09_28_USA_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLNSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ >SNJ_P_nsp2_VIPR_ALG4_QGJ02388_1_9253_10158_1_2018_10_China_Swine_PEDV AGLRKMAQPSGVVEKCIVRVCYGNMALNGLWLGDTVICPRHVIASSTTST IDYDYALSVLRLHNFSISSGNVFLGVVGVTMRGALLQIKVNQNNVHTPKY TYRTVRPGESFNILACYDGSAAGVYGVNMRSNYTIRGSFINGACGSPGYN INNGTVEFCYLHQLELGSGCHVGSDLDGVMYGGYEDQPTLQVEGASSLFT ENVLAFLYAALINGSTWWLSSSRIAVDRFNEWAVHNGMTTVVNTDCFSIL AAKTGVDVQRLLASIQSLHKNFGGKQILGYTSLTDEFTTGEVIRQMYGVN LQ
Reading sequence file /data//pss_subsets/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/fasta/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1
Found 90 sequences of length 906
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 0.9%
Found 50 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 4
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 86 polymorphic sites
**p-Value(s)**
----------
NSS: 5.07e-01 (1000 permutations)
Max Chi^2: 0.00e+00 (1000 permutations)
PHI (Permutation): 1.73e-01 (1000 permutations)
PHI (Normal): 1.31e-01
#NEXUS
[ID: 1589890515]
begin taxa;
dimensions ntax=90;
taxlabels
CHSD2014_nsp2_VIPR_ALG4_AQX36341_1_9284_10189_1_2014_05_12_China_Swine_PEDV
CH_SCZY103_2017_nsp2_VIPR_ALG4_AZL47215_1_9284_10189_1_2017_12_01_China_Swine_PEDV
USA_SouthDakota285_2014_nsp2_VIPR_ALG4_825144566_9239_10144_1_2014_04_02_USA_Swine_PEDV
PC177_nsp2_VIPR_ALG4_893707341_9273_10178_1_2013_12_USA_Swine_PEDV
IBR_6_JPN_2014_nsp2_VIPR_ALG4_948549270_9226_10131_1_2014_05_Japan_Pig_PEDV
IBT_VN_nsp2_VIPR_ALG4_QPX15727_1_9284_10189_1_2018_02_02_Viet_Nam_Swine_PEDV
PEDV_1776_Badajoz_Alburquerque_nsp2_VIPR_ALG4_QKV43780_1_9288_10193_1_2016_02_12_Spain_Swine_PEDV
COL_Cundinamarca03962_2014_nsp2_VIPR_ALG4_QGQ60245_1_9272_10177_1_2014_03_21_Colombia_Swine_PEDV
USA_NorthCarolina66_2013_nsp2_VIPR_ALG4_658130428_9249_10154_1_2013_11_23_USA_Swine_PEDV
IWT_4_JPN_2014_nsp2_VIPR_ALG4_948549144_9226_10131_1_2014_04_Japan_Pig_PEDV
JS2008_nsp2_VIPR_ALG4_459357910_9260_10165_1_2008_China_Swine_PEDV
USA_Ohio60_2013_nsp2_VIPR_ALG4_658130393_9249_10154_1_2013_11_12_USA_Swine_PEDV
PEDV_1931_3_Burgos_Aranda_de_Duero_nsp2_VIPR_ALG4_QKV43810_1_9288_10193_1_2017_01_19_Spain_Swine_PEDV
CH_YNKM_8_2013_nsp2_VIPR_ALG4_575502657_9284_10189_1_2013_09_20_China_Unknown_PEDV
KNU_141112_S_DEL2_nsp2_VIPR_ALG4_ASA40090_1_9284_10189_1_2016_01_South_Korea_Swine_PEDV
ZJU_G2_2013_nsp2_VIPR_ALG4_ANY27030_1_9284_10189_1_2013_11_14_China_Swine_PEDV
KNU_141112_P10_nsp2_VIPR_ALG4_906851979_9284_10189_1_2014_11_South_Korea_Swine_PEDV
KCH_2_JPN_2014_nsp2_VIPR_ALG4_948549368_9226_10131_1_2014_03_Japan_Pig_PEDV
PEDV_2330_Orense_nsp2_VIPR_ALG4_QKV43840_1_9288_10193_1_2019_01_30_Spain_Swine_PEDV
COL_Cauca_2015_nsp2_VIPR_ALG4_QGQ60335_1_9269_10174_1_2015_05_05_Colombia_Swine_PEDV
CH_TP_2_2_2018_nsp2_VIPR_ALG4_QCC26579_1_9284_10189_1_2018_China_Swine_PEDV
USA_Iowa303_2014_nsp2_VIPR_ALG4_825144846_9239_10144_1_2014_04_07_USA_Swine_PEDV
USA_Minnesota306_2014_nsp2_VIPR_ALG4_825144573_9239_10144_1_2014_04_08_USA_Swine_PEDV
KGW_1_JPN_2014_nsp2_VIPR_ALG4_948549221_9226_10131_1_2014_04_Japan_Pig_PEDV
PEDV_Belgorod_dom_2008_nsp2_VIPR_ALG4_ASV51727_1_9283_10188_1_NA_Russia_Unknown_PEDV
COL_Antioquia10641_2015_nsp2_VIPR_ALG4_QGQ60323_1_9271_10176_1_2015_08_11_Colombia_Swine_PEDV
KNU_1406_1_nsp2_VIPR_ALG4_692148234_9284_10189_1_2014_03_South_Korea_Swine_PEDV
GDS24_nsp2_VIPR_ALG4_QCQ19821_1_9284_10189_1_2012_06_04_China_Swine_PEDV
USA_Minnesota200_2014_nsp2_VIPR_ALG4_825144832_9239_10144_1_2014_03_05_USA_Swine_PEDV
KNU_1601_nsp2_VIPR_ALG4_ASA69723_1_9284_10189_1_2016_03_South_Korea_Swine_PEDV
PEDV_GER_L00857_K14_14_04_2014_nsp2_VIPR_ALG4_SNQ28009_1_9265_10170_1_NA_NA_Unknown_PEDV
AJ1102_F12_nsp2_VIPR_ALG4_QGZ28403_1_9284_10189_1_2011_05_China_Swine_PEDV
PEDV_GER_L01013_K01_15_03_2015_nsp2_VIPR_ALG4_SNQ27886_1_9284_10189_1_NA_NA_Unknown_PEDV
USA_Minnesota79_2013_nsp2_VIPR_ALG4_658130512_9249_10154_1_2013_11_30_USA_Swine_PEDV
AH_M_nsp2_VIPR_ALG4_575502852_9260_10165_1_2011_10_20_China_Unknown_PEDV
USA_Minnesota42_2013_nsp2_VIPR_ALG4_658130330_9249_10154_1_2013_10_20_USA_Swine_PEDV
KNU_1807_nsp2_VIPR_ALG4_QBA57557_1_9263_10168_1_2018_03_South_Korea_Swine_PEDV
PEDV_GER_L00926_K20_4_01_2014_nsp2_VIPR_ALG4_SNQ27892_1_9284_10189_1_NA_NA_Unknown_PEDV
COL_ValledelCauca08565_2015_nsp2_VIPR_ALG4_QGQ60305_1_9272_10177_1_2015_07_03_Colombia_Swine_PEDV
USA_Iowa23_57_2013_nsp2_VIPR_ALG4_658130337_9249_10154_1_2013_10_20_USA_Swine_PEDV
KNU_1829_nsp2_VIPR_ALG4_QDZ36667_1_9275_10180_1_2018_11_South_Korea_Swine_PEDV
USA_Minnesota94_2013_nsp2_VIPR_ALG4_658130596_9249_10154_1_2013_12_10_USA_Swine_PEDV
KUIDL_PED_2014_007_nsp2_VIPR_ALG4_614790571_9063_9968_1_2014_02_South_Korea_Swine_PEDV
PEDV_GER_L00933_K22_14_05_2014_nsp2_VIPR_ALG4_SNQ28063_1_9284_10189_1_NA_NA_Unknown_PEDV
CH_SCLS_2018_nsp2_VIPR_ALG4_AZL47221_1_9284_10189_1_2018_01_12_China_Swine_PEDV
FJzz1_nsp2_VIPR_ALG4_QAR17955_1_9284_10189_1_2011_05_22_China_Unknown_PEDV
YN60_nsp2_VIPR_ALG4_946526347_9284_10189_1_2014_02_05_China_Swine_PEDV
PEDV_10F_nsp2_VIPR_ALG4_761662529_9284_10189_1_2012_01_China_Swine_PEDV
USA_Ohio126_2014_nsp2_VIPR_ALG4_658130708_9249_10154_1_2014_01_29_USA_Swine_PEDV
MIE_1_JPN_2014_nsp2_VIPR_ALG4_948549242_9226_10131_1_2014_03_Japan_Pig_PEDV
PEDV_GER_L01014_K01_15_04_2015_nsp2_VIPR_ALG4_SNQ27948_1_9284_10189_1_NA_NA_Unknown_PEDV
G2_nsp2_VIPR_ALG4_QCT24236_1_9284_10189_1_2016_China_Swine_PEDV
HUA_14PED96_nsp2_VIPR_ALG4_959945338_9212_10117_1_2014_10_15_Viet_Nam_Swine_PEDV
USA_Wisconsin55_2013_nsp2_VIPR_ALG4_658130365_9249_10154_1_2013_11_03_USA_Swine_PEDV
USA_Texas435_2014_nsp2_VIPR_ALG4_825144895_9239_10144_1_2014_11_18_USA_Swine_PEDV
PEDV_MEX_JAL_01_2017_nsp2_VIPR_ALG4_AVU05366_1_9114_10019_1_2017_02_10_Mexico_Swine_PEDV
NW8_nsp2_VIPR_ALG4_ATY72311_1_9284_10189_1_2015_China_Swine_PEDV
PEDV_GER_L01059_K07_15_01_2015_nsp2_VIPR_ALG4_SNQ28037_1_9284_10189_1_NA_NA_Unknown_PEDV
GDS09_nsp2_VIPR_ALG4_QCQ20073_1_9284_10189_1_2014_08_01_China_Swine_PEDV
PEDV_1842_2016_ITA_nsp2_VIPR_ALG4_AQY61718_1_9284_10189_1_2016_01_28_Italy_Swine_PEDV
COL_ValledelCauca05762_2015_nsp2_VIPR_ALG4_QGQ60269_1_9272_10177_1_2015_05_20_Colombia_Swine_PEDV
PEDV_1481_Pamplona_Tudela_nsp2_VIPR_ALG4_QKV43738_1_9249_10154_1_2014_06_03_Spain_Swine_PEDV
USA_Minnesota41_2013_nsp2_VIPR_ALG4_658130323_9249_10154_1_2013_10_14_USA_Swine_PEDV
PEDV_H3_Barcelona_Vic_nsp2_VIPR_ALG4_QKV43846_1_9288_10193_1_2019_01_07_Spain_Swine_PEDV
GDS15_nsp2_VIPR_ALG4_QCQ19971_1_9284_10189_1_2012_07_15_China_Swine_PEDV
CH_SXYL_2016_nsp2_VIPR_ALG4_ASY04642_1_9283_10188_1_2016_09_10_China_Swine_PEDV
ZJCZ4_nsp2_VIPR_ALG4_409898553_9284_10189_1_2011_04_10_China_Swine_PEDV
GD_B_nsp2_VIPR_ALG4_399227062_9284_10189_1_2012_China_Swine_PEDV
S100_nsp2_VIPR_ALG4_QCO95409_1_9284_10189_1_2018_04_19_South_Korea_Swine_PEDV
PEDV_GER_L00862_2014_nsp2_VIPR_ALG4_SNQ28087_1_9249_10154_1_NA_NA_Unknown_PEDV
USA_Minnesota82_2013_nsp2_VIPR_ALG4_658130526_9249_10154_1_2013_12_02_USA_Swine_PEDV
PEDV_LYG_nsp2_VIPR_ALG4_761662571_9284_10189_1_2014_03_China_Swine_PEDV
GDS21_nsp2_VIPR_ALG4_QCQ19851_1_9284_10189_1_2014_01_09_China_Swine_PEDV
PEDV_1453_Zaragoza_Tauste_nsp2_VIPR_ALG4_QKV43720_1_9249_10154_1_2014_04_24_Spain_Swine_PEDV
USA_Illinois97_2013_nsp2_VIPR_ALG4_658130617_9249_10154_1_2013_12_11_USA_Swine_PEDV
PEDV_JS_A_nsp2_VIPR_ALG4_AZS18877_1_9284_10189_1_2017_11_10_China_Swine_PEDV
USA_Missouri177_2014_nsp2_VIPR_ALG4_825144510_9239_10144_1_2014_01_14_USA_Swine_PEDV
USA_Minnesota64_2013_nsp2_VIPR_ALG4_658130414_9249_10154_1_2013_11_19_USA_Swine_PEDV
PEDV_MEX_JAL_02_2014_nsp2_VIPR_ALG4_AVU05457_1_9114_10019_1_2014_07_19_Mexico_Swine_PEDV
GDS27_nsp2_VIPR_ALG4_QCQ19905_1_9284_10189_1_2014_06_06_China_Swine_PEDV
UNKNOWN_MT843278_nsp2_VIPR_ALG4_QMU85400_1_9285_10190_1_2019_12_China_Unknown_PEDV
USA_Minnesota62_2013_nsp2_VIPR_ALG4_658130400_9249_10154_1_2013_11_18_USA_Swine_PEDV
PEDV_ROMANIA_L01329_K25_15_01_2015_nsp2_VIPR_ALG4_SNQ28013_1_9272_10177_1_NA_NA_Unknown_PEDV
USA_Nebraska348_2014_nsp2_VIPR_ALG4_825144545_9239_10144_1_2014_02_25_USA_Swine_PEDV
PEDV_MEX_JAL_19_2017_nsp2_VIPR_ALG4_AVU05352_1_9114_10019_1_2017_05_10_Mexico_Swine_PEDV
GDS33_nsp2_VIPR_ALG4_QCQ19899_1_9284_10189_1_2014_07_28_China_Swine_PEDV
USA_Oklahoma38_2013_nsp2_VIPR_ALG4_658130302_9249_10154_1_2013_09_07_USA_Swine_PEDV
USA_Texas39_2013_nsp2_VIPR_ALG4_658130309_9249_10154_1_2013_09_28_USA_Swine_PEDV
USA_Minnesota84_2013_nsp2_VIPR_ALG4_658130743_9249_10154_1_2013_12_03_USA_Swine_PEDV
SNJ_P_nsp2_VIPR_ALG4_QGJ02388_1_9253_10158_1_2018_10_China_Swine_PEDV
;
end;
begin trees;
translate
1 CHSD2014_nsp2_VIPR_ALG4_AQX36341_1_9284_10189_1_2014_05_12_China_Swine_PEDV,
2 CH_SCZY103_2017_nsp2_VIPR_ALG4_AZL47215_1_9284_10189_1_2017_12_01_China_Swine_PEDV,
3 USA_SouthDakota285_2014_nsp2_VIPR_ALG4_825144566_9239_10144_1_2014_04_02_USA_Swine_PEDV,
4 PC177_nsp2_VIPR_ALG4_893707341_9273_10178_1_2013_12_USA_Swine_PEDV,
5 IBR_6_JPN_2014_nsp2_VIPR_ALG4_948549270_9226_10131_1_2014_05_Japan_Pig_PEDV,
6 IBT_VN_nsp2_VIPR_ALG4_QPX15727_1_9284_10189_1_2018_02_02_Viet_Nam_Swine_PEDV,
7 PEDV_1776_Badajoz_Alburquerque_nsp2_VIPR_ALG4_QKV43780_1_9288_10193_1_2016_02_12_Spain_Swine_PEDV,
8 COL_Cundinamarca03962_2014_nsp2_VIPR_ALG4_QGQ60245_1_9272_10177_1_2014_03_21_Colombia_Swine_PEDV,
9 USA_NorthCarolina66_2013_nsp2_VIPR_ALG4_658130428_9249_10154_1_2013_11_23_USA_Swine_PEDV,
10 IWT_4_JPN_2014_nsp2_VIPR_ALG4_948549144_9226_10131_1_2014_04_Japan_Pig_PEDV,
11 JS2008_nsp2_VIPR_ALG4_459357910_9260_10165_1_2008_China_Swine_PEDV,
12 USA_Ohio60_2013_nsp2_VIPR_ALG4_658130393_9249_10154_1_2013_11_12_USA_Swine_PEDV,
13 PEDV_1931_3_Burgos_Aranda_de_Duero_nsp2_VIPR_ALG4_QKV43810_1_9288_10193_1_2017_01_19_Spain_Swine_PEDV,
14 CH_YNKM_8_2013_nsp2_VIPR_ALG4_575502657_9284_10189_1_2013_09_20_China_Unknown_PEDV,
15 KNU_141112_S_DEL2_nsp2_VIPR_ALG4_ASA40090_1_9284_10189_1_2016_01_South_Korea_Swine_PEDV,
16 ZJU_G2_2013_nsp2_VIPR_ALG4_ANY27030_1_9284_10189_1_2013_11_14_China_Swine_PEDV,
17 KNU_141112_P10_nsp2_VIPR_ALG4_906851979_9284_10189_1_2014_11_South_Korea_Swine_PEDV,
18 KCH_2_JPN_2014_nsp2_VIPR_ALG4_948549368_9226_10131_1_2014_03_Japan_Pig_PEDV,
19 PEDV_2330_Orense_nsp2_VIPR_ALG4_QKV43840_1_9288_10193_1_2019_01_30_Spain_Swine_PEDV,
20 COL_Cauca_2015_nsp2_VIPR_ALG4_QGQ60335_1_9269_10174_1_2015_05_05_Colombia_Swine_PEDV,
21 CH_TP_2_2_2018_nsp2_VIPR_ALG4_QCC26579_1_9284_10189_1_2018_China_Swine_PEDV,
22 USA_Iowa303_2014_nsp2_VIPR_ALG4_825144846_9239_10144_1_2014_04_07_USA_Swine_PEDV,
23 USA_Minnesota306_2014_nsp2_VIPR_ALG4_825144573_9239_10144_1_2014_04_08_USA_Swine_PEDV,
24 KGW_1_JPN_2014_nsp2_VIPR_ALG4_948549221_9226_10131_1_2014_04_Japan_Pig_PEDV,
25 PEDV_Belgorod_dom_2008_nsp2_VIPR_ALG4_ASV51727_1_9283_10188_1_NA_Russia_Unknown_PEDV,
26 COL_Antioquia10641_2015_nsp2_VIPR_ALG4_QGQ60323_1_9271_10176_1_2015_08_11_Colombia_Swine_PEDV,
27 KNU_1406_1_nsp2_VIPR_ALG4_692148234_9284_10189_1_2014_03_South_Korea_Swine_PEDV,
28 GDS24_nsp2_VIPR_ALG4_QCQ19821_1_9284_10189_1_2012_06_04_China_Swine_PEDV,
29 USA_Minnesota200_2014_nsp2_VIPR_ALG4_825144832_9239_10144_1_2014_03_05_USA_Swine_PEDV,
30 KNU_1601_nsp2_VIPR_ALG4_ASA69723_1_9284_10189_1_2016_03_South_Korea_Swine_PEDV,
31 PEDV_GER_L00857_K14_14_04_2014_nsp2_VIPR_ALG4_SNQ28009_1_9265_10170_1_NA_NA_Unknown_PEDV,
32 AJ1102_F12_nsp2_VIPR_ALG4_QGZ28403_1_9284_10189_1_2011_05_China_Swine_PEDV,
33 PEDV_GER_L01013_K01_15_03_2015_nsp2_VIPR_ALG4_SNQ27886_1_9284_10189_1_NA_NA_Unknown_PEDV,
34 USA_Minnesota79_2013_nsp2_VIPR_ALG4_658130512_9249_10154_1_2013_11_30_USA_Swine_PEDV,
35 AH_M_nsp2_VIPR_ALG4_575502852_9260_10165_1_2011_10_20_China_Unknown_PEDV,
36 USA_Minnesota42_2013_nsp2_VIPR_ALG4_658130330_9249_10154_1_2013_10_20_USA_Swine_PEDV,
37 KNU_1807_nsp2_VIPR_ALG4_QBA57557_1_9263_10168_1_2018_03_South_Korea_Swine_PEDV,
38 PEDV_GER_L00926_K20_4_01_2014_nsp2_VIPR_ALG4_SNQ27892_1_9284_10189_1_NA_NA_Unknown_PEDV,
39 COL_ValledelCauca08565_2015_nsp2_VIPR_ALG4_QGQ60305_1_9272_10177_1_2015_07_03_Colombia_Swine_PEDV,
40 USA_Iowa23_57_2013_nsp2_VIPR_ALG4_658130337_9249_10154_1_2013_10_20_USA_Swine_PEDV,
41 KNU_1829_nsp2_VIPR_ALG4_QDZ36667_1_9275_10180_1_2018_11_South_Korea_Swine_PEDV,
42 USA_Minnesota94_2013_nsp2_VIPR_ALG4_658130596_9249_10154_1_2013_12_10_USA_Swine_PEDV,
43 KUIDL_PED_2014_007_nsp2_VIPR_ALG4_614790571_9063_9968_1_2014_02_South_Korea_Swine_PEDV,
44 PEDV_GER_L00933_K22_14_05_2014_nsp2_VIPR_ALG4_SNQ28063_1_9284_10189_1_NA_NA_Unknown_PEDV,
45 CH_SCLS_2018_nsp2_VIPR_ALG4_AZL47221_1_9284_10189_1_2018_01_12_China_Swine_PEDV,
46 FJzz1_nsp2_VIPR_ALG4_QAR17955_1_9284_10189_1_2011_05_22_China_Unknown_PEDV,
47 YN60_nsp2_VIPR_ALG4_946526347_9284_10189_1_2014_02_05_China_Swine_PEDV,
48 PEDV_10F_nsp2_VIPR_ALG4_761662529_9284_10189_1_2012_01_China_Swine_PEDV,
49 USA_Ohio126_2014_nsp2_VIPR_ALG4_658130708_9249_10154_1_2014_01_29_USA_Swine_PEDV,
50 MIE_1_JPN_2014_nsp2_VIPR_ALG4_948549242_9226_10131_1_2014_03_Japan_Pig_PEDV,
51 PEDV_GER_L01014_K01_15_04_2015_nsp2_VIPR_ALG4_SNQ27948_1_9284_10189_1_NA_NA_Unknown_PEDV,
52 G2_nsp2_VIPR_ALG4_QCT24236_1_9284_10189_1_2016_China_Swine_PEDV,
53 HUA_14PED96_nsp2_VIPR_ALG4_959945338_9212_10117_1_2014_10_15_Viet_Nam_Swine_PEDV,
54 USA_Wisconsin55_2013_nsp2_VIPR_ALG4_658130365_9249_10154_1_2013_11_03_USA_Swine_PEDV,
55 USA_Texas435_2014_nsp2_VIPR_ALG4_825144895_9239_10144_1_2014_11_18_USA_Swine_PEDV,
56 PEDV_MEX_JAL_01_2017_nsp2_VIPR_ALG4_AVU05366_1_9114_10019_1_2017_02_10_Mexico_Swine_PEDV,
57 NW8_nsp2_VIPR_ALG4_ATY72311_1_9284_10189_1_2015_China_Swine_PEDV,
58 PEDV_GER_L01059_K07_15_01_2015_nsp2_VIPR_ALG4_SNQ28037_1_9284_10189_1_NA_NA_Unknown_PEDV,
59 GDS09_nsp2_VIPR_ALG4_QCQ20073_1_9284_10189_1_2014_08_01_China_Swine_PEDV,
60 PEDV_1842_2016_ITA_nsp2_VIPR_ALG4_AQY61718_1_9284_10189_1_2016_01_28_Italy_Swine_PEDV,
61 COL_ValledelCauca05762_2015_nsp2_VIPR_ALG4_QGQ60269_1_9272_10177_1_2015_05_20_Colombia_Swine_PEDV,
62 PEDV_1481_Pamplona_Tudela_nsp2_VIPR_ALG4_QKV43738_1_9249_10154_1_2014_06_03_Spain_Swine_PEDV,
63 USA_Minnesota41_2013_nsp2_VIPR_ALG4_658130323_9249_10154_1_2013_10_14_USA_Swine_PEDV,
64 PEDV_H3_Barcelona_Vic_nsp2_VIPR_ALG4_QKV43846_1_9288_10193_1_2019_01_07_Spain_Swine_PEDV,
65 GDS15_nsp2_VIPR_ALG4_QCQ19971_1_9284_10189_1_2012_07_15_China_Swine_PEDV,
66 CH_SXYL_2016_nsp2_VIPR_ALG4_ASY04642_1_9283_10188_1_2016_09_10_China_Swine_PEDV,
67 ZJCZ4_nsp2_VIPR_ALG4_409898553_9284_10189_1_2011_04_10_China_Swine_PEDV,
68 GD_B_nsp2_VIPR_ALG4_399227062_9284_10189_1_2012_China_Swine_PEDV,
69 S100_nsp2_VIPR_ALG4_QCO95409_1_9284_10189_1_2018_04_19_South_Korea_Swine_PEDV,
70 PEDV_GER_L00862_2014_nsp2_VIPR_ALG4_SNQ28087_1_9249_10154_1_NA_NA_Unknown_PEDV,
71 USA_Minnesota82_2013_nsp2_VIPR_ALG4_658130526_9249_10154_1_2013_12_02_USA_Swine_PEDV,
72 PEDV_LYG_nsp2_VIPR_ALG4_761662571_9284_10189_1_2014_03_China_Swine_PEDV,
73 GDS21_nsp2_VIPR_ALG4_QCQ19851_1_9284_10189_1_2014_01_09_China_Swine_PEDV,
74 PEDV_1453_Zaragoza_Tauste_nsp2_VIPR_ALG4_QKV43720_1_9249_10154_1_2014_04_24_Spain_Swine_PEDV,
75 USA_Illinois97_2013_nsp2_VIPR_ALG4_658130617_9249_10154_1_2013_12_11_USA_Swine_PEDV,
76 PEDV_JS_A_nsp2_VIPR_ALG4_AZS18877_1_9284_10189_1_2017_11_10_China_Swine_PEDV,
77 USA_Missouri177_2014_nsp2_VIPR_ALG4_825144510_9239_10144_1_2014_01_14_USA_Swine_PEDV,
78 USA_Minnesota64_2013_nsp2_VIPR_ALG4_658130414_9249_10154_1_2013_11_19_USA_Swine_PEDV,
79 PEDV_MEX_JAL_02_2014_nsp2_VIPR_ALG4_AVU05457_1_9114_10019_1_2014_07_19_Mexico_Swine_PEDV,
80 GDS27_nsp2_VIPR_ALG4_QCQ19905_1_9284_10189_1_2014_06_06_China_Swine_PEDV,
81 UNKNOWN_MT843278_nsp2_VIPR_ALG4_QMU85400_1_9285_10190_1_2019_12_China_Unknown_PEDV,
82 USA_Minnesota62_2013_nsp2_VIPR_ALG4_658130400_9249_10154_1_2013_11_18_USA_Swine_PEDV,
83 PEDV_ROMANIA_L01329_K25_15_01_2015_nsp2_VIPR_ALG4_SNQ28013_1_9272_10177_1_NA_NA_Unknown_PEDV,
84 USA_Nebraska348_2014_nsp2_VIPR_ALG4_825144545_9239_10144_1_2014_02_25_USA_Swine_PEDV,
85 PEDV_MEX_JAL_19_2017_nsp2_VIPR_ALG4_AVU05352_1_9114_10019_1_2017_05_10_Mexico_Swine_PEDV,
86 GDS33_nsp2_VIPR_ALG4_QCQ19899_1_9284_10189_1_2014_07_28_China_Swine_PEDV,
87 USA_Oklahoma38_2013_nsp2_VIPR_ALG4_658130302_9249_10154_1_2013_09_07_USA_Swine_PEDV,
88 USA_Texas39_2013_nsp2_VIPR_ALG4_658130309_9249_10154_1_2013_09_28_USA_Swine_PEDV,
89 USA_Minnesota84_2013_nsp2_VIPR_ALG4_658130743_9249_10154_1_2013_12_03_USA_Swine_PEDV,
90 SNJ_P_nsp2_VIPR_ALG4_QGJ02388_1_9253_10158_1_2018_10_China_Swine_PEDV
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:9.157596e-04,3:4.123635e-04,5:3.908432e-04,9:3.987758e-04,10:4.253198e-04,12:3.750114e-04,15:9.945612e-04,16:9.173062e-04,17:3.944522e-04,18:2.033903e-03,21:2.089259e-03,22:4.105121e-04,23:4.025386e-04,28:1.550641e-03,29:4.077522e-04,30:1.535455e-03,34:3.949195e-04,37:2.643125e-03,40:4.104930e-04,42:4.016445e-04,43:4.123234e-04,48:1.528165e-02,49:4.099737e-04,50:3.724155e-04,54:3.844928e-04,55:3.955087e-04,63:3.986857e-04,66:4.137921e-04,68:9.489037e-04,69:3.302861e-03,71:4.116582e-04,77:4.039313e-04,81:1.563400e-03,82:3.856545e-04,85:2.186504e-03,87:1.002601e-03,88:9.726865e-04,89:4.096601e-04,90:2.125174e-03,(20:9.500813e-04,26:3.751229e-04,39:3.885858e-04)1.000:1.606066e-03,(57:9.754864e-04,86:3.845077e-04)0.989:9.983822e-04,(4:4.018631e-04,24:3.799249e-04,36:4.121387e-04,61:4.158015e-04,75:3.964753e-04,78:4.057716e-04)0.964:9.713139e-04,(56:4.562562e-04,79:1.077122e-03)0.836:1.003071e-03,((2:9.642709e-04,((((6:3.398896e-03,52:6.175228e-03)1.000:3.869316e-03,(11:4.274012e-04,35:9.880939e-04,59:3.796627e-04)1.000:9.152246e-03,25:8.145160e-03)0.839:9.955505e-04,((32:3.970938e-04,67:1.497274e-03,76:1.011941e-03)1.000:2.583300e-03,65:1.035143e-03)0.999:1.658830e-03)1.000:3.233710e-03,((((7:3.833470e-04,60:1.513327e-03,64:3.916582e-04)0.931:9.646958e-04,13:3.930751e-04,19:2.063193e-03,31:4.384469e-04,33:9.622268e-04,38:4.067873e-04,44:3.919340e-04,51:3.949961e-04,58:3.921542e-04,62:4.004332e-04,70:3.872582e-04,74:3.805509e-04,83:4.114175e-04)0.821:9.619040e-04,8:3.933576e-04,27:3.845617e-04)0.812:1.326931e-03,80:1.728518e-03)0.834:1.551044e-03)0.833:1.196663e-03,(14:4.053809e-04,47:4.197935e-04)1.000:1.577663e-03,46:3.912943e-04,53:9.549007e-04,73:9.443095e-04)0.784:9.715896e-04,72:1.544026e-03,84:9.544578e-04)0.786:9.440453e-04,(41:2.328890e-03,45:3.284366e-03)0.577:1.033736e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:9.157596e-04,3:4.123635e-04,5:3.908432e-04,9:3.987758e-04,10:4.253198e-04,12:3.750114e-04,15:9.945612e-04,16:9.173062e-04,17:3.944522e-04,18:2.033903e-03,21:2.089259e-03,22:4.105121e-04,23:4.025386e-04,28:1.550641e-03,29:4.077522e-04,30:1.535455e-03,34:3.949195e-04,37:2.643125e-03,40:4.104930e-04,42:4.016445e-04,43:4.123234e-04,48:1.528165e-02,49:4.099737e-04,50:3.724155e-04,54:3.844928e-04,55:3.955087e-04,63:3.986857e-04,66:4.137921e-04,68:9.489037e-04,69:3.302861e-03,71:4.116582e-04,77:4.039313e-04,81:1.563400e-03,82:3.856545e-04,85:2.186504e-03,87:1.002601e-03,88:9.726865e-04,89:4.096601e-04,90:2.125174e-03,(20:9.500813e-04,26:3.751229e-04,39:3.885858e-04):1.606066e-03,(57:9.754864e-04,86:3.845077e-04):9.983822e-04,(4:4.018631e-04,24:3.799249e-04,36:4.121387e-04,61:4.158015e-04,75:3.964753e-04,78:4.057716e-04):9.713139e-04,(56:4.562562e-04,79:1.077122e-03):1.003071e-03,((2:9.642709e-04,((((6:3.398896e-03,52:6.175228e-03):3.869316e-03,(11:4.274012e-04,35:9.880939e-04,59:3.796627e-04):9.152246e-03,25:8.145160e-03):9.955505e-04,((32:3.970938e-04,67:1.497274e-03,76:1.011941e-03):2.583300e-03,65:1.035143e-03):1.658830e-03):3.233710e-03,((((7:3.833470e-04,60:1.513327e-03,64:3.916582e-04):9.646958e-04,13:3.930751e-04,19:2.063193e-03,31:4.384469e-04,33:9.622268e-04,38:4.067873e-04,44:3.919340e-04,51:3.949961e-04,58:3.921542e-04,62:4.004332e-04,70:3.872582e-04,74:3.805509e-04,83:4.114175e-04):9.619040e-04,8:3.933576e-04,27:3.845617e-04):1.326931e-03,80:1.728518e-03):1.551044e-03):1.196663e-03,(14:4.053809e-04,47:4.197935e-04):1.577663e-03,46:3.912943e-04,53:9.549007e-04,73:9.443095e-04):9.715896e-04,72:1.544026e-03,84:9.544578e-04):9.440453e-04,(41:2.328890e-03,45:3.284366e-03):1.033736e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1859.01 -1884.63
2 -1857.15 -1882.63
--------------------------------------
TOTAL -1857.70 -1884.06
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.107596 0.000191 0.082229 0.135381 0.106466 1440.40 1470.70 1.000
r(A<->C){all} 0.072685 0.000978 0.020225 0.134386 0.069066 736.64 802.47 1.004
r(A<->G){all} 0.241763 0.002233 0.153562 0.335791 0.240157 656.15 708.68 1.000
r(A<->T){all} 0.031404 0.000264 0.004043 0.063136 0.029129 1014.05 1051.64 1.000
r(C<->G){all} 0.078784 0.001032 0.021943 0.141653 0.075751 477.46 520.40 1.001
r(C<->T){all} 0.381100 0.002832 0.275694 0.480473 0.380228 635.47 743.90 1.002
r(G<->T){all} 0.194265 0.001429 0.122526 0.266972 0.191604 606.32 651.95 1.000
pi(A){all} 0.235871 0.000186 0.210441 0.264507 0.235887 1027.67 1128.84 1.000
pi(C){all} 0.184749 0.000153 0.161905 0.210168 0.184510 919.20 996.61 1.000
pi(G){all} 0.237047 0.000196 0.211339 0.266437 0.236911 1017.46 1041.09 1.001
pi(T){all} 0.342333 0.000236 0.312316 0.372519 0.342701 928.33 1009.91 1.002
alpha{1,2} 0.942695 0.913947 0.000496 2.893835 0.648502 1250.55 1256.61 1.000
alpha{3} 1.376686 1.046723 0.109621 3.503814 1.113900 1189.02 1239.85 1.000
pinvar{all} 0.271966 0.025781 0.000109 0.545554 0.264760 840.70 966.38 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\ ***************** TYPES OF STANDARD ANALYSES ***************** (1) Selection Analyses (2) Evolutionary Hypothesis Testing (3) Relative evolutionary rate inference (4) Coevolutionary analysis (5) Basic Analyses (6) Codon Selection Analyses (7) Compartmentalization (8) Data File Tools (9) Miscellaneous (10) Model Comparison (11) Kernel Analysis Tools (12) Molecular Clock (13) Phylogeny Reconstruction (14) Positive Selection (15) Recombination (16) Selection/Recombination (17) Relative Rate (18) Relative Ratio (19) Substitution Rates Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' ***************** (1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution). (2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood). (3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting). (4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection). (5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification). (6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood). (7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation). Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types): Analysis Description -------------------- Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a coding sequence alignment to determine whether some sites have been subject to pervasive purifying or diversifying selection. v2.1 introduces two more methods for estimating the posterior distribution of grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation Bayes approximation (fastest). Please note that a FUBAR analysis generates a cache and a results JSON file in the same directory as directory as the original alignment. HyPhy needs to have write privileges to this directory. For example if the original file is in /home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there will also exist FUBAR-generated files /home/sergei/FUBAR/data/pol.nex.FUBAR.json, /home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide checkpointing so that a partially completed analysis can be restarted. - __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree (one per partition) - __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring selection (2013), Mol Biol Evol. 30(5):1196-205 - __Written by__: Sergei L Kosakovsky Pond - __Contact Information__: spond@temple.edu - __Analysis Version__: 2.1 ####Choose Genetic Code 1. [**Universal**] Universal code. (Genebank transl_table=1). 2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2). 3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3). 4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4). 5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5). 6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6). 7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9). 8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10). 9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12). 10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13). 11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14). 12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15). 13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16). 14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21). 15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22). 16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23). 17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24). 18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25). 19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26). >Please choose an option (or press q to cancel selection): >Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`) >A tree was found in the data file: `(C34,C619,C192,C597,C206,C606,C231,C651,C230,C220,C72,C507,C545,C132,C531,C236,C571,C248,C504,C579,C260,C312,C603,C272,C628,C627,C552,C68,C165,C427,C572,C584,C465,C559,C397,C615,C625,C575,C441,(C90,C87,C99),(C284,C141),(C295,C224,C555,C97,C493,C561),(C389,C391),((C65,((((C196,C111),(C208,C13,C117),C344),((C16,C648,C381),C123)),((((C325,C326,C380),C331,C337,C350,C366,C356,C362,C368,C374,C317,C351,C315,C411),C93,C228),C135)),(C75,C642),C105,C182,C129),C385,C596),(C252,C60))` >Would you like to use it (y/n)? >Loaded a multiple sequence alignment with **90** sequences, **302** codons, and **1** partitions from `/data//pss_subsets/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1.fna` > FUBAR will write cache and result files to _/data//pss_subsets/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result/original_alignment/fubar/results/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1/LZW_nsp2_VIPR_ALG4_672096717_9284_10189_1_2012_02_China_Unknown_PEDV.result.1.fna.FUBAR.json_, respectively > Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer): ####Posterior estimation method 1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation) 2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed) 3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default) >Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5): ### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model * Log(L) = -2388.92, AIC-c = 5012.18 (117 estimated parameters) * Tree length (expected substitutions/site) for partition 1 : 0.188 ### Computing the phylogenetic likelihood function on the grid * Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid * Best scaling achieved for * synonymous rate = 1.227 * non-synonymous rate = 0.571 * Computing conditional site likelihoods on a 20 x 20 rate grid ### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights * Using the following settings * Dirichlet alpha : 0.5 ### Tabulating site-level results | Codon | Partition | alpha | beta |Posterior prob for positive selection| |:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:| | 120 | 1 | 1.063 | 14.478 | Pos. posterior = 0.9749 | ---- ## FUBAR inferred 1 sites subject to diversifying positive selection at posterior probability >= 0.9 Of these, 0.03 are expected to be false positives (95% confidence interval of 0-1 )
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
