--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1300.41 -1319.36
2 -1300.43 -1320.87
--------------------------------------
TOTAL -1300.42 -1320.38
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.076140 0.000149 0.053899 0.100009 0.075116 1285.71 1321.69 1.000
r(A<->C){all} 0.137483 0.002801 0.045178 0.238309 0.130978 508.98 551.43 1.001
r(A<->G){all} 0.167082 0.002936 0.068154 0.271167 0.163665 523.71 577.92 1.002
r(A<->T){all} 0.114804 0.001706 0.037762 0.194427 0.111247 831.19 837.75 1.000
r(C<->G){all} 0.106598 0.002084 0.026648 0.193759 0.100501 360.75 463.85 1.002
r(C<->T){all} 0.365612 0.004370 0.235394 0.492322 0.363366 608.89 612.39 1.000
r(G<->T){all} 0.108420 0.001594 0.039431 0.190899 0.103180 655.15 672.56 1.001
pi(A){all} 0.219769 0.000231 0.189476 0.248068 0.219464 954.97 977.78 1.000
pi(C){all} 0.220062 0.000246 0.188979 0.249649 0.219458 1230.66 1235.43 1.000
pi(G){all} 0.232471 0.000261 0.199546 0.262412 0.232373 1096.81 1119.79 1.000
pi(T){all} 0.327699 0.000295 0.295398 0.361517 0.327326 1007.37 1068.95 1.000
alpha{1,2} 0.779644 0.752872 0.000217 2.512613 0.489435 1089.93 1109.33 1.000
alpha{3} 1.444429 1.301131 0.002920 3.812072 1.135705 1104.57 1221.85 1.000
pinvar{all} 0.295641 0.033936 0.000494 0.610508 0.281960 852.94 860.35 1.004
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
-- Starting log on Thu Nov 17 16:36:16 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result--
-- Starting log on Thu Nov 17 16:38:10 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result--
-- Starting log on Thu Nov 17 16:36:16 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result--
-- Starting log on Thu Nov 17 22:48:57 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result/gapped_alignment/fubar,LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 90 taxa and 690 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C156
Taxon 2 -> C65
Taxon 3 -> C31
Taxon 4 -> C71
Taxon 5 -> C108
Taxon 6 -> C168
Taxon 7 -> C325
Taxon 8 -> C144
Taxon 9 -> C117
Taxon 10 -> C122
Taxon 11 -> C180
Taxon 12 -> C154
Taxon 13 -> C331
Taxon 14 -> C660
Taxon 15 -> C570
Taxon 16 -> C547
Taxon 17 -> C587
Taxon 18 -> C82
Taxon 19 -> C363
Taxon 20 -> C210
Taxon 21 -> C166
Taxon 22 -> C195
Taxon 23 -> C489
Taxon 24 -> C337
Taxon 25 -> C334
Taxon 26 -> C510
Taxon 27 -> C186
Taxon 28 -> C208
Taxon 29 -> C343
Taxon 30 -> C209
Taxon 31 -> C44
Taxon 32 -> C205
Taxon 33 -> C218
Taxon 34 -> C571
Taxon 35 -> C351
Taxon 36 -> C564
Taxon 37 -> C91
Taxon 38 -> C226
Taxon 39 -> C227
Taxon 40 -> C356
Taxon 41 -> C164
Taxon 42 -> C642
Taxon 43 -> C248
Taxon 44 -> C238
Taxon 45 -> C60
Taxon 46 -> C360
Taxon 47 -> C106
Taxon 48 -> C302
Taxon 49 -> C66
Taxon 50 -> C528
Taxon 51 -> C250
Taxon 52 -> C366
Taxon 53 -> C112
Taxon 54 -> C440
Taxon 55 -> C126
Taxon 56 -> C506
Taxon 57 -> C552
Taxon 58 -> C262
Taxon 59 -> C372
Taxon 60 -> C118
Taxon 61 -> C578
Taxon 62 -> C33
Taxon 63 -> C576
Taxon 64 -> C274
Taxon 65 -> C378
Taxon 66 -> C124
Taxon 67 -> C196
Taxon 68 -> C103
Taxon 69 -> C502
Taxon 70 -> C600
Taxon 71 -> C286
Taxon 72 -> C384
Taxon 73 -> C130
Taxon 74 -> C247
Taxon 75 -> C562
Taxon 76 -> C624
Taxon 77 -> C298
Taxon 78 -> C505
Taxon 79 -> C390
Taxon 80 -> C136
Taxon 81 -> C391
Taxon 82 -> C622
Taxon 83 -> C648
Taxon 84 -> C310
Taxon 85 -> C396
Taxon 86 -> C142
Taxon 87 -> C535
Taxon 88 -> C682
Taxon 89 -> C575
Taxon 90 -> C672
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668725339
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 224719235
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 0148841716
Seed = 2047149503
Swapseed = 1668725339
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 30 unique site patterns
Division 2 has 15 unique site patterns
Division 3 has 56 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -3449.994821 -- 149.597508
Chain 2 -- -3510.014928 -- 149.597508
Chain 3 -- -3461.570289 -- 149.597508
Chain 4 -- -3507.781003 -- 149.597508
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -3496.503786 -- 149.597508
Chain 2 -- -3469.436626 -- 149.597508
Chain 3 -- -3525.008910 -- 149.597508
Chain 4 -- -3482.887148 -- 149.597508
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-3449.995] (-3510.015) (-3461.570) (-3507.781) * [-3496.504] (-3469.437) (-3525.009) (-3482.887)
1000 -- (-2432.698) (-2508.190) (-2569.924) [-2387.575] * (-2474.570) (-2495.142) (-2469.075) [-2436.697] -- 0:49:57
2000 -- (-2163.051) (-2237.415) (-2346.991) [-2159.228] * [-2149.787] (-2340.930) (-2375.260) (-2309.426) -- 0:41:35
3000 -- [-2095.752] (-2145.443) (-2281.466) (-2075.317) * [-2042.566] (-2177.631) (-2356.761) (-2127.902) -- 0:38:46
4000 -- (-2061.003) (-2088.903) (-2220.364) [-2040.966] * [-2016.452] (-2098.790) (-2320.158) (-2040.667) -- 0:41:30
5000 -- [-2004.205] (-2024.099) (-2164.015) (-1996.556) * (-2020.564) [-1967.837] (-2226.340) (-2032.800) -- 0:39:48
Average standard deviation of split frequencies: 0.085192
6000 -- [-1980.339] (-2013.296) (-2147.614) (-1962.071) * (-2004.687) [-1942.043] (-2202.149) (-1978.792) -- 0:38:39
7000 -- (-1949.089) (-1996.387) (-2126.081) [-1944.796] * (-2011.009) [-1936.529] (-2175.572) (-1967.912) -- 0:37:49
8000 -- (-1945.360) (-1967.098) (-2123.019) [-1942.601] * (-1984.474) [-1933.601] (-2115.263) (-1951.056) -- 0:37:12
9000 -- [-1926.581] (-1965.786) (-2104.814) (-1939.606) * (-1979.905) [-1936.351] (-2102.819) (-1950.351) -- 0:38:32
10000 -- [-1924.005] (-1942.330) (-2101.217) (-1950.912) * (-1972.265) [-1945.545] (-2096.378) (-1955.875) -- 0:37:57
Average standard deviation of split frequencies: 0.107688
11000 -- [-1912.204] (-1951.914) (-2092.925) (-1936.632) * (-1957.050) [-1947.518] (-2091.010) (-1946.344) -- 0:37:27
12000 -- [-1911.985] (-1949.731) (-2058.090) (-1949.765) * (-1960.261) [-1939.634] (-2092.823) (-1957.918) -- 0:37:03
13000 -- [-1923.910] (-1937.089) (-2072.234) (-1956.061) * (-1945.035) [-1934.650] (-2087.230) (-1926.076) -- 0:37:57
14000 -- [-1928.765] (-1936.531) (-2063.514) (-1952.600) * (-1951.000) (-1932.360) (-2071.484) [-1926.748] -- 0:37:33
15000 -- [-1923.005] (-1962.173) (-2057.784) (-1935.833) * (-1947.573) (-1943.445) (-2072.585) [-1917.358] -- 0:38:18
Average standard deviation of split frequencies: 0.117851
16000 -- [-1915.992] (-1933.787) (-2067.102) (-1951.663) * [-1911.242] (-1943.036) (-2069.554) (-1928.352) -- 0:37:55
17000 -- (-1919.566) [-1925.380] (-2055.414) (-1949.954) * (-1918.737) [-1924.080] (-2068.713) (-1930.002) -- 0:38:32
18000 -- [-1920.354] (-1939.427) (-2041.267) (-1941.019) * [-1909.713] (-1937.735) (-2062.387) (-1917.370) -- 0:38:11
19000 -- (-1933.997) [-1939.301] (-2053.874) (-1937.028) * (-1929.674) (-1929.927) (-2079.352) [-1916.874] -- 0:37:51
20000 -- [-1933.033] (-1938.883) (-2059.535) (-1923.707) * [-1912.006] (-1937.527) (-2072.080) (-1932.970) -- 0:37:34
Average standard deviation of split frequencies: 0.114879
21000 -- [-1910.879] (-1937.960) (-2048.200) (-1926.487) * [-1907.629] (-1915.906) (-2056.658) (-1945.454) -- 0:38:04
22000 -- [-1920.277] (-1923.929) (-2046.953) (-1936.949) * [-1912.669] (-1927.395) (-2051.341) (-1955.571) -- 0:37:47
23000 -- (-1918.096) [-1917.228] (-2049.606) (-1932.617) * (-1920.867) [-1909.991] (-2057.245) (-1944.305) -- 0:38:13
24000 -- (-1908.621) [-1913.773] (-2061.487) (-1956.616) * (-1909.314) [-1911.414] (-2060.578) (-1941.395) -- 0:37:57
25000 -- (-1927.614) [-1902.840] (-2060.394) (-1956.391) * [-1896.685] (-1915.700) (-2068.787) (-1932.105) -- 0:37:42
Average standard deviation of split frequencies: 0.089791
26000 -- (-1951.674) [-1911.616] (-2058.381) (-1931.640) * [-1909.818] (-1912.592) (-2059.769) (-1932.852) -- 0:38:05
27000 -- (-1955.219) [-1899.409] (-2061.580) (-1938.521) * [-1904.075] (-1931.329) (-2054.556) (-1954.764) -- 0:37:50
28000 -- (-1932.949) [-1912.569] (-2057.080) (-1926.824) * [-1905.173] (-1932.353) (-2069.933) (-1943.467) -- 0:38:11
29000 -- (-1921.162) [-1914.819] (-2070.133) (-1941.308) * [-1913.066] (-1935.053) (-2090.404) (-1956.412) -- 0:37:56
30000 -- (-1932.902) [-1903.297] (-2066.368) (-1941.827) * [-1905.399] (-1931.763) (-2095.829) (-1951.371) -- 0:37:43
Average standard deviation of split frequencies: 0.071063
31000 -- (-1934.693) [-1893.849] (-2074.687) (-1959.696) * [-1923.339] (-1927.995) (-2088.908) (-1937.652) -- 0:37:30
32000 -- (-1924.430) [-1898.869] (-2066.612) (-1952.531) * [-1911.171] (-1917.227) (-2068.422) (-1954.392) -- 0:37:18
33000 -- (-1939.012) [-1912.104] (-2069.698) (-1973.196) * [-1899.021] (-1923.778) (-2079.188) (-1949.614) -- 0:37:36
34000 -- (-1950.878) [-1904.768] (-2057.548) (-1920.899) * [-1907.026] (-1910.161) (-2051.958) (-1933.216) -- 0:37:24
35000 -- (-1939.128) (-1904.470) (-2059.740) [-1914.173] * (-1903.230) [-1908.198] (-2053.394) (-1947.928) -- 0:37:13
Average standard deviation of split frequencies: 0.070799
36000 -- (-1952.404) [-1907.629] (-2058.549) (-1926.203) * [-1909.364] (-1915.931) (-2078.722) (-1938.012) -- 0:37:02
37000 -- [-1925.569] (-1931.046) (-2042.895) (-1950.402) * [-1903.662] (-1906.344) (-2069.574) (-1937.289) -- 0:37:18
38000 -- [-1925.614] (-1924.860) (-2029.075) (-1945.328) * (-1910.043) (-1926.979) (-2064.190) [-1921.051] -- 0:37:07
39000 -- [-1920.440] (-1918.819) (-2031.940) (-1958.930) * [-1910.163] (-1916.967) (-2056.587) (-1925.459) -- 0:36:57
40000 -- (-1921.267) [-1902.660] (-2055.176) (-1933.431) * (-1906.809) [-1912.506] (-2078.102) (-1954.431) -- 0:37:12
Average standard deviation of split frequencies: 0.074519
41000 -- (-1921.547) [-1915.240] (-2036.824) (-1936.537) * [-1923.361] (-1900.502) (-2064.524) (-1942.861) -- 0:37:02
42000 -- (-1927.206) [-1897.979] (-2039.896) (-1948.580) * (-1925.738) [-1903.436] (-2077.939) (-1931.558) -- 0:36:52
43000 -- (-1922.491) [-1885.155] (-2054.220) (-1927.911) * (-1915.460) [-1899.823] (-2083.821) (-1937.401) -- 0:36:43
44000 -- (-1917.846) [-1890.682] (-2058.949) (-1926.598) * (-1917.058) [-1907.991] (-2067.064) (-1945.942) -- 0:36:56
45000 -- (-1942.075) [-1886.228] (-2070.674) (-1918.758) * [-1903.816] (-1906.925) (-2060.953) (-1935.973) -- 0:36:47
Average standard deviation of split frequencies: 0.067393
46000 -- (-1941.756) [-1896.589] (-2070.948) (-1918.934) * [-1891.182] (-1912.028) (-2062.454) (-1935.393) -- 0:36:38
47000 -- (-1935.436) [-1902.637] (-2060.857) (-1936.664) * [-1906.347] (-1916.528) (-2048.563) (-1933.712) -- 0:36:50
48000 -- (-1949.950) [-1911.800] (-2051.069) (-1931.676) * [-1895.057] (-1942.338) (-2070.312) (-1913.693) -- 0:36:41
49000 -- (-1954.783) (-1920.478) (-2050.164) [-1914.812] * (-1913.128) [-1913.154] (-2092.239) (-1913.495) -- 0:36:33
50000 -- (-1948.065) [-1896.330] (-2039.877) (-1913.523) * (-1936.112) (-1913.533) (-2081.541) [-1910.241] -- 0:36:44
Average standard deviation of split frequencies: 0.062427
51000 -- (-1969.773) [-1887.070] (-2050.733) (-1915.457) * (-1898.923) (-1918.917) (-2077.355) [-1899.566] -- 0:36:35
52000 -- (-1963.583) [-1890.416] (-2055.383) (-1926.102) * (-1898.182) (-1923.193) (-2089.203) [-1901.669] -- 0:36:27
53000 -- (-1936.290) [-1892.664] (-2069.269) (-1923.631) * [-1891.970] (-1917.991) (-2102.872) (-1930.406) -- 0:36:37
54000 -- (-1925.364) [-1894.873] (-2055.896) (-1917.401) * [-1887.211] (-1908.335) (-2074.013) (-1917.778) -- 0:36:29
55000 -- (-1926.087) [-1902.087] (-2066.698) (-1937.565) * [-1885.592] (-1921.021) (-2069.821) (-1913.099) -- 0:36:22
Average standard deviation of split frequencies: 0.062652
56000 -- (-1923.511) [-1891.186] (-2060.124) (-1930.190) * [-1902.687] (-1915.680) (-2059.110) (-1929.419) -- 0:36:31
57000 -- (-1952.714) [-1884.715] (-2047.780) (-1926.901) * [-1890.699] (-1920.904) (-2074.351) (-1925.571) -- 0:36:23
58000 -- (-1927.869) [-1888.037] (-2063.146) (-1938.369) * [-1906.745] (-1921.569) (-2064.885) (-1941.758) -- 0:36:16
59000 -- (-1945.652) [-1883.730] (-2063.895) (-1911.457) * [-1889.953] (-1927.175) (-2077.332) (-1942.767) -- 0:36:25
60000 -- (-1933.894) [-1874.549] (-2077.134) (-1911.051) * [-1898.865] (-1910.835) (-2071.619) (-1954.093) -- 0:36:17
Average standard deviation of split frequencies: 0.059030
61000 -- (-1935.381) (-1903.594) (-2073.411) [-1913.008] * [-1908.389] (-1916.827) (-2047.871) (-1955.761) -- 0:36:10
62000 -- (-1927.968) (-1890.104) (-2086.758) [-1897.461] * [-1902.162] (-1913.215) (-2058.287) (-1959.986) -- 0:36:03
63000 -- (-1931.740) [-1893.331] (-2066.124) (-1895.879) * [-1900.762] (-1912.048) (-2065.982) (-1939.364) -- 0:36:11
64000 -- (-1934.980) (-1895.463) (-2054.804) [-1898.775] * (-1899.377) [-1907.511] (-2055.500) (-1951.426) -- 0:36:04
65000 -- (-1923.363) [-1895.438] (-2062.631) (-1903.198) * (-1904.535) [-1896.291] (-2065.766) (-1954.747) -- 0:35:57
Average standard deviation of split frequencies: 0.053569
66000 -- (-1908.307) [-1898.842] (-2069.865) (-1927.789) * (-1914.874) [-1897.288] (-2059.305) (-1934.749) -- 0:36:05
67000 -- (-1902.165) [-1886.384] (-2057.694) (-1919.519) * (-1916.779) [-1886.468] (-2050.962) (-1915.909) -- 0:35:58
68000 -- (-1904.456) [-1875.270] (-2047.763) (-1912.253) * (-1927.523) [-1898.875] (-2060.690) (-1909.146) -- 0:36:05
69000 -- [-1893.361] (-1880.240) (-2062.905) (-1925.767) * (-1916.072) [-1899.802] (-2065.007) (-1920.470) -- 0:35:58
70000 -- (-1897.584) [-1875.941] (-2045.832) (-1911.921) * (-1911.882) [-1912.114] (-2054.256) (-1922.815) -- 0:35:52
Average standard deviation of split frequencies: 0.054120
71000 -- [-1894.913] (-1882.674) (-2045.914) (-1921.730) * (-1912.269) [-1915.527] (-2050.483) (-1929.382) -- 0:35:58
72000 -- [-1903.094] (-1893.115) (-2058.217) (-1917.121) * (-1910.837) [-1905.750] (-2050.820) (-1934.357) -- 0:35:52
73000 -- (-1920.934) [-1900.230] (-2063.318) (-1925.474) * (-1918.851) [-1903.026] (-2070.981) (-1920.078) -- 0:35:46
74000 -- [-1913.416] (-1907.788) (-2059.071) (-1905.688) * (-1914.856) [-1904.305] (-2072.126) (-1930.906) -- 0:35:39
75000 -- (-1923.380) (-1912.304) (-2057.048) [-1895.437] * (-1931.425) [-1891.697] (-2054.401) (-1915.149) -- 0:35:46
Average standard deviation of split frequencies: 0.054584
76000 -- (-1913.956) (-1940.502) (-2056.633) [-1906.448] * (-1931.490) [-1882.029] (-2055.227) (-1898.507) -- 0:35:39
77000 -- (-1921.108) (-1914.353) (-2037.147) [-1903.176] * (-1917.215) [-1887.843] (-2053.754) (-1910.150) -- 0:35:33
78000 -- (-1921.820) (-1906.811) (-2045.644) [-1889.738] * (-1926.956) [-1889.492] (-2055.836) (-1917.258) -- 0:35:39
79000 -- (-1923.873) (-1922.385) (-2074.895) [-1901.171] * (-1925.347) [-1897.156] (-2074.249) (-1907.806) -- 0:35:33
80000 -- (-1936.532) (-1914.703) (-2059.306) [-1897.210] * (-1942.391) [-1889.330] (-2058.649) (-1913.487) -- 0:35:27
Average standard deviation of split frequencies: 0.050062
81000 -- (-1936.682) (-1906.874) (-2046.350) [-1894.636] * (-1931.122) [-1894.417] (-2061.387) (-1914.403) -- 0:35:32
82000 -- (-1934.635) (-1901.213) (-2051.472) [-1889.539] * (-1927.324) [-1888.340] (-2078.348) (-1906.993) -- 0:35:27
83000 -- (-1921.038) (-1904.212) (-2048.332) [-1893.978] * (-1921.901) [-1896.118] (-2076.943) (-1900.540) -- 0:35:32
84000 -- (-1923.149) [-1902.715] (-2058.723) (-1925.384) * (-1924.625) [-1895.745] (-2069.423) (-1906.180) -- 0:35:26
85000 -- (-1919.020) [-1892.149] (-2072.832) (-1907.961) * (-1915.962) [-1907.358] (-2069.420) (-1920.134) -- 0:35:20
Average standard deviation of split frequencies: 0.048968
86000 -- (-1916.077) (-1903.821) (-2051.203) [-1894.291] * (-1909.435) [-1916.062] (-2062.974) (-1911.205) -- 0:35:25
87000 -- (-1937.550) (-1903.135) (-2066.892) [-1881.404] * (-1927.505) [-1905.599] (-2053.046) (-1916.461) -- 0:35:19
88000 -- (-1923.189) (-1891.608) (-2066.810) [-1890.212] * (-1921.609) (-1922.103) (-2064.806) [-1895.876] -- 0:35:24
89000 -- (-1935.596) (-1909.263) (-2053.582) [-1886.880] * (-1935.403) (-1908.595) (-2066.843) [-1903.025] -- 0:35:18
90000 -- (-1971.988) [-1893.620] (-2050.300) (-1910.278) * (-1941.627) (-1915.464) (-2049.084) [-1890.721] -- 0:35:13
Average standard deviation of split frequencies: 0.044855
91000 -- (-1937.747) [-1895.421] (-2057.338) (-1903.702) * (-1926.893) (-1921.971) (-2057.025) [-1885.642] -- 0:35:17
92000 -- [-1891.973] (-1891.149) (-2042.248) (-1928.113) * (-1957.667) (-1910.862) (-2055.470) [-1902.232] -- 0:35:12
93000 -- [-1896.577] (-1930.820) (-2045.725) (-1913.098) * (-1941.754) [-1915.567] (-2064.585) (-1916.394) -- 0:35:16
94000 -- (-1934.607) [-1906.318] (-2046.802) (-1912.508) * (-1930.120) [-1910.213] (-2065.393) (-1918.965) -- 0:35:10
95000 -- (-1930.140) [-1899.458] (-2048.080) (-1897.399) * (-1934.445) [-1903.137] (-2053.089) (-1909.671) -- 0:35:05
Average standard deviation of split frequencies: 0.044694
96000 -- (-1920.741) (-1893.861) (-2053.379) [-1908.995] * (-1926.102) [-1903.513] (-2051.085) (-1902.728) -- 0:35:09
97000 -- (-1924.674) (-1896.291) (-2046.225) [-1889.489] * (-1914.059) [-1898.820] (-2050.844) (-1908.508) -- 0:35:03
98000 -- (-1930.191) (-1903.357) (-2057.407) [-1883.848] * (-1923.808) [-1888.950] (-2052.546) (-1898.294) -- 0:35:07
99000 -- (-1922.259) (-1930.493) (-2054.053) [-1889.640] * (-1921.035) (-1904.220) (-2054.656) [-1888.796] -- 0:35:02
100000 -- (-1925.862) (-1926.083) (-2048.368) [-1894.498] * (-1946.066) [-1899.713] (-2058.376) (-1919.309) -- 0:34:57
Average standard deviation of split frequencies: 0.045161
101000 -- (-1934.198) (-1915.218) (-2056.813) [-1893.463] * (-1926.949) [-1899.023] (-2055.562) (-1927.329) -- 0:34:51
102000 -- (-1927.985) (-1943.742) (-2056.531) [-1889.803] * [-1914.622] (-1908.419) (-2061.144) (-1924.720) -- 0:34:46
103000 -- (-1948.786) (-1926.747) (-2041.937) [-1893.022] * (-1905.242) [-1904.344] (-2060.078) (-1927.466) -- 0:34:50
104000 -- (-1916.422) (-1923.058) (-2053.581) [-1903.304] * (-1901.740) [-1902.783] (-2062.357) (-1929.069) -- 0:34:44
105000 -- (-1910.947) (-1923.766) (-2062.285) [-1896.360] * (-1902.165) [-1910.840] (-2080.950) (-1929.261) -- 0:34:39
Average standard deviation of split frequencies: 0.044397
106000 -- (-1921.432) (-1934.011) (-2049.074) [-1892.533] * [-1911.914] (-1903.202) (-2078.612) (-1901.367) -- 0:34:34
107000 -- (-1922.752) (-1907.280) (-2047.187) [-1887.897] * (-1915.018) [-1891.079] (-2082.227) (-1894.699) -- 0:34:29
108000 -- (-1909.373) (-1928.149) (-2064.075) [-1888.654] * (-1931.972) [-1908.868] (-2077.671) (-1911.262) -- 0:34:33
109000 -- (-1908.187) (-1940.041) (-2057.285) [-1888.394] * (-1929.557) [-1891.422] (-2096.192) (-1902.684) -- 0:34:28
110000 -- (-1904.461) (-1925.774) (-2051.051) [-1878.074] * (-1933.806) [-1899.376] (-2076.483) (-1895.402) -- 0:34:31
Average standard deviation of split frequencies: 0.040864
111000 -- (-1901.598) (-1958.474) (-2053.524) [-1886.974] * (-1934.101) [-1897.707] (-2073.193) (-1897.963) -- 0:34:26
112000 -- (-1913.948) (-1931.068) (-2053.138) [-1884.220] * (-1926.975) [-1898.046] (-2063.379) (-1941.856) -- 0:34:21
113000 -- (-1911.051) (-1915.800) (-2057.123) [-1879.562] * (-1933.940) [-1901.735] (-2071.924) (-1927.194) -- 0:34:16
114000 -- (-1917.019) (-1925.781) (-2046.246) [-1894.223] * (-1936.518) [-1895.511] (-2073.213) (-1919.116) -- 0:34:19
115000 -- (-1903.966) (-1935.020) (-2055.841) [-1885.371] * (-1949.364) [-1894.751] (-2072.191) (-1924.142) -- 0:34:14
Average standard deviation of split frequencies: 0.040363
116000 -- (-1914.752) (-1940.048) (-2052.662) [-1892.422] * (-1951.875) (-1893.864) (-2078.502) [-1895.946] -- 0:34:09
117000 -- (-1916.008) (-1947.512) (-2034.104) [-1884.397] * (-1937.333) (-1909.918) (-2056.962) [-1906.063] -- 0:34:12
118000 -- (-1907.848) (-1943.855) (-2049.643) [-1891.703] * (-1922.260) [-1896.000] (-2056.482) (-1915.382) -- 0:34:15
119000 -- (-1923.399) (-1936.157) (-2069.436) [-1888.138] * (-1937.973) [-1904.665] (-2042.660) (-1915.994) -- 0:34:25
120000 -- (-1915.330) (-1945.838) (-2070.061) [-1899.510] * (-1925.097) [-1888.066] (-2041.728) (-1916.829) -- 0:34:28
Average standard deviation of split frequencies: 0.040010
121000 -- [-1907.463] (-1953.381) (-2061.214) (-1921.924) * (-1913.543) [-1892.498] (-2064.513) (-1921.783) -- 0:34:37
122000 -- [-1906.518] (-1945.375) (-2080.008) (-1923.079) * (-1936.522) [-1897.672] (-2068.402) (-1917.914) -- 0:34:39
123000 -- (-1908.741) (-1939.429) (-2063.221) [-1909.326] * (-1929.992) [-1903.219] (-2050.220) (-1907.404) -- 0:34:49
124000 -- [-1911.575] (-1930.328) (-2065.399) (-1914.159) * (-1941.484) (-1917.037) (-2050.080) [-1909.260] -- 0:34:51
125000 -- [-1906.883] (-1943.704) (-2054.900) (-1921.924) * (-1948.729) [-1905.889] (-2059.850) (-1896.422) -- 0:34:53
Average standard deviation of split frequencies: 0.041535
126000 -- [-1909.858] (-1954.756) (-2053.879) (-1928.871) * (-1936.668) [-1901.946] (-2069.060) (-1924.712) -- 0:35:01
127000 -- [-1933.820] (-1930.371) (-2049.502) (-1931.475) * (-1927.016) [-1885.419] (-2067.259) (-1904.379) -- 0:35:03
128000 -- (-1923.198) (-1942.022) (-2052.492) [-1915.504] * (-1943.101) (-1889.392) (-2075.580) [-1906.588] -- 0:35:05
129000 -- [-1914.452] (-1929.886) (-2041.914) (-1916.299) * (-1953.902) [-1906.168] (-2073.425) (-1906.662) -- 0:35:13
130000 -- (-1932.250) (-1936.397) (-2061.908) [-1899.449] * (-1954.315) (-1899.219) (-2069.767) [-1907.328] -- 0:35:14
Average standard deviation of split frequencies: 0.043109
131000 -- (-1909.923) (-1936.392) (-2052.199) [-1897.676] * (-1952.771) (-1899.835) (-2070.925) [-1907.501] -- 0:35:16
132000 -- (-1908.600) (-1928.948) (-2063.540) [-1905.107] * (-1943.391) [-1895.236] (-2065.010) (-1908.709) -- 0:35:23
133000 -- (-1925.788) (-1927.249) (-2058.913) [-1903.254] * (-1926.976) [-1899.314] (-2060.800) (-1917.826) -- 0:35:25
134000 -- [-1898.100] (-1922.603) (-2062.037) (-1918.559) * (-1925.906) [-1896.860] (-2072.335) (-1909.538) -- 0:35:26
135000 -- [-1895.258] (-1944.139) (-2060.529) (-1910.354) * (-1932.871) (-1897.694) (-2066.450) [-1895.240] -- 0:35:27
Average standard deviation of split frequencies: 0.044884
136000 -- [-1891.188] (-1935.482) (-2051.898) (-1910.010) * (-1917.904) [-1895.384] (-2064.984) (-1904.427) -- 0:35:21
137000 -- [-1898.412] (-1943.533) (-2043.786) (-1911.142) * (-1926.803) (-1901.701) (-2060.826) [-1902.135] -- 0:35:22
138000 -- [-1887.288] (-1929.260) (-2060.287) (-1921.638) * (-1935.669) [-1890.041] (-2070.060) (-1890.301) -- 0:35:17
139000 -- [-1890.821] (-1927.144) (-2058.136) (-1911.514) * (-1899.394) [-1896.792] (-2058.679) (-1910.826) -- 0:35:18
140000 -- [-1875.195] (-1924.922) (-2052.959) (-1930.921) * (-1905.980) [-1897.801] (-2056.493) (-1924.743) -- 0:35:13
Average standard deviation of split frequencies: 0.044020
141000 -- (-1887.607) [-1903.155] (-2076.971) (-1945.822) * [-1902.521] (-1910.353) (-2057.047) (-1922.922) -- 0:35:07
142000 -- [-1887.024] (-1908.243) (-2067.689) (-1925.231) * (-1911.111) [-1920.534] (-2070.801) (-1934.181) -- 0:35:08
143000 -- [-1896.778] (-1904.367) (-2055.570) (-1926.119) * (-1917.327) (-1924.887) (-2069.204) [-1908.809] -- 0:35:03
144000 -- [-1895.545] (-1909.977) (-2060.293) (-1942.112) * [-1909.040] (-1927.317) (-2055.567) (-1915.770) -- 0:35:04
145000 -- [-1886.228] (-1933.141) (-2069.061) (-1913.395) * [-1895.798] (-1931.371) (-2073.973) (-1941.447) -- 0:34:59
Average standard deviation of split frequencies: 0.043589
146000 -- [-1889.024] (-1932.451) (-2068.506) (-1930.449) * [-1899.728] (-1940.681) (-2061.949) (-1929.463) -- 0:34:59
147000 -- [-1897.468] (-1912.589) (-2069.229) (-1919.406) * [-1891.950] (-1966.105) (-2076.213) (-1922.529) -- 0:34:54
148000 -- [-1887.007] (-1908.581) (-2061.726) (-1959.675) * [-1904.222] (-1939.902) (-2073.917) (-1933.025) -- 0:34:55
149000 -- [-1892.197] (-1900.868) (-2058.521) (-1947.410) * [-1901.166] (-1931.942) (-2079.516) (-1944.860) -- 0:34:50
150000 -- [-1893.836] (-1902.698) (-2057.059) (-1967.992) * [-1909.466] (-1928.309) (-2070.671) (-1944.407) -- 0:34:45
Average standard deviation of split frequencies: 0.044439
151000 -- [-1897.863] (-1914.764) (-2066.789) (-1955.231) * (-1908.927) [-1903.429] (-2063.059) (-1942.649) -- 0:34:45
152000 -- [-1872.318] (-1905.352) (-2078.164) (-1927.537) * [-1898.570] (-1911.661) (-2073.547) (-1932.264) -- 0:34:40
153000 -- [-1885.570] (-1919.730) (-2071.536) (-1918.415) * (-1920.299) [-1897.987] (-2087.367) (-1928.135) -- 0:34:35
154000 -- [-1885.087] (-1905.362) (-2069.670) (-1928.993) * (-1920.145) [-1901.481] (-2065.822) (-1944.069) -- 0:34:36
155000 -- [-1893.718] (-1911.693) (-2065.052) (-1938.252) * (-1925.624) [-1899.857] (-2062.039) (-1957.638) -- 0:34:31
Average standard deviation of split frequencies: 0.043098
156000 -- [-1883.551] (-1931.975) (-2052.172) (-1947.175) * (-1926.413) [-1896.886] (-2069.166) (-1942.150) -- 0:34:26
157000 -- [-1895.176] (-1916.980) (-2045.070) (-1942.136) * (-1913.012) [-1901.419] (-2078.792) (-1936.918) -- 0:34:27
158000 -- [-1890.031] (-1918.941) (-2040.244) (-1925.061) * [-1898.648] (-1894.783) (-2097.968) (-1934.669) -- 0:34:33
159000 -- [-1890.807] (-1914.473) (-2046.277) (-1927.390) * (-1914.836) [-1890.311] (-2078.157) (-1931.104) -- 0:34:33
160000 -- (-1903.792) [-1912.196] (-2040.625) (-1947.761) * (-1917.163) [-1886.095] (-2083.408) (-1922.150) -- 0:34:33
Average standard deviation of split frequencies: 0.041226
161000 -- [-1897.067] (-1902.794) (-2071.534) (-1945.010) * (-1939.741) (-1893.132) (-2089.571) [-1915.299] -- 0:34:34
162000 -- [-1887.274] (-1908.147) (-2043.644) (-1920.061) * (-1922.821) [-1889.514] (-2079.429) (-1909.158) -- 0:34:34
163000 -- [-1886.260] (-1901.014) (-2035.557) (-1928.613) * (-1919.870) [-1907.204] (-2067.918) (-1933.294) -- 0:34:29
164000 -- (-1895.170) [-1896.949] (-2052.737) (-1931.623) * [-1906.573] (-1911.342) (-2069.335) (-1932.964) -- 0:34:24
165000 -- [-1900.993] (-1897.739) (-2044.174) (-1928.194) * [-1908.533] (-1913.941) (-2067.177) (-1940.104) -- 0:34:24
Average standard deviation of split frequencies: 0.041153
166000 -- [-1900.467] (-1915.021) (-2030.922) (-1939.250) * (-1905.264) [-1889.119] (-2073.738) (-1939.062) -- 0:34:24
167000 -- [-1899.030] (-1938.945) (-2044.401) (-1908.549) * (-1915.501) [-1894.952] (-2066.697) (-1941.555) -- 0:34:30
168000 -- [-1902.960] (-1933.626) (-2040.892) (-1906.111) * (-1911.390) [-1893.997] (-2053.776) (-1945.194) -- 0:34:30
169000 -- [-1902.230] (-1912.643) (-2049.037) (-1927.614) * (-1902.650) [-1903.535] (-2069.805) (-1933.202) -- 0:34:35
170000 -- (-1896.061) [-1908.888] (-2067.342) (-1955.473) * [-1903.621] (-1900.902) (-2076.409) (-1938.719) -- 0:34:35
Average standard deviation of split frequencies: 0.041292
171000 -- (-1935.828) [-1894.223] (-2057.351) (-1934.467) * [-1925.103] (-1926.699) (-2076.956) (-1947.522) -- 0:34:39
172000 -- (-1904.952) [-1901.730] (-2054.722) (-1940.187) * (-1912.942) [-1903.029] (-2067.663) (-1944.379) -- 0:34:39
173000 -- (-1905.589) [-1898.862] (-2045.323) (-1931.214) * (-1921.089) [-1895.887] (-2074.627) (-1928.372) -- 0:34:44
174000 -- [-1899.891] (-1903.716) (-2043.632) (-1941.317) * (-1913.244) [-1905.513] (-2058.312) (-1935.567) -- 0:34:43
175000 -- [-1899.585] (-1902.330) (-2060.489) (-1935.502) * (-1919.194) [-1895.100] (-2062.825) (-1929.113) -- 0:34:43
Average standard deviation of split frequencies: 0.040086
176000 -- (-1895.265) [-1903.955] (-2076.355) (-1917.064) * (-1910.672) [-1903.321] (-2069.894) (-1931.851) -- 0:34:43
177000 -- [-1898.827] (-1913.016) (-2060.822) (-1910.361) * (-1918.642) [-1895.079] (-2063.286) (-1936.877) -- 0:34:47
178000 -- (-1890.721) (-1918.122) (-2061.308) [-1902.510] * (-1926.114) [-1893.884] (-2059.138) (-1953.502) -- 0:34:47
179000 -- (-1894.644) (-1923.370) (-2066.466) [-1902.575] * (-1909.359) [-1875.459] (-2062.777) (-1944.671) -- 0:34:51
180000 -- (-1900.984) (-1917.488) (-2065.151) [-1909.554] * (-1913.525) [-1879.641] (-2060.808) (-1955.936) -- 0:34:51
Average standard deviation of split frequencies: 0.037414
181000 -- (-1920.800) (-1929.231) (-2071.997) [-1891.587] * [-1904.459] (-1906.028) (-2061.172) (-1943.595) -- 0:34:55
182000 -- (-1901.568) (-1933.361) (-2067.617) [-1887.928] * (-1911.187) [-1904.024] (-2064.079) (-1954.376) -- 0:34:58
183000 -- [-1897.181] (-1945.991) (-2060.273) (-1896.448) * [-1893.197] (-1905.802) (-2049.673) (-1928.936) -- 0:34:58
184000 -- [-1892.274] (-1949.651) (-2054.141) (-1908.413) * [-1898.921] (-1918.500) (-2038.378) (-1933.981) -- 0:35:02
185000 -- (-1891.888) (-1942.554) (-2057.435) [-1915.741] * [-1903.344] (-1917.638) (-2060.082) (-1947.639) -- 0:35:01
Average standard deviation of split frequencies: 0.037931
186000 -- [-1883.742] (-1951.854) (-2076.057) (-1896.714) * [-1898.985] (-1914.138) (-2066.216) (-1926.791) -- 0:35:05
187000 -- (-1888.634) (-1940.051) (-2058.956) [-1890.665] * [-1909.544] (-1913.702) (-2065.119) (-1932.102) -- 0:35:08
188000 -- [-1883.555] (-1934.697) (-2050.812) (-1896.654) * [-1898.252] (-1898.279) (-2066.063) (-1926.809) -- 0:35:07
189000 -- [-1893.399] (-1923.512) (-2061.246) (-1908.539) * [-1909.291] (-1915.915) (-2071.250) (-1939.671) -- 0:35:11
190000 -- [-1897.480] (-1930.929) (-2062.945) (-1917.832) * [-1893.855] (-1905.086) (-2070.534) (-1932.119) -- 0:35:10
Average standard deviation of split frequencies: 0.039298
191000 -- [-1888.988] (-1914.461) (-2072.974) (-1917.743) * [-1891.500] (-1905.361) (-2074.704) (-1939.339) -- 0:35:13
192000 -- [-1890.565] (-1921.531) (-2060.945) (-1910.050) * [-1900.132] (-1900.270) (-2054.206) (-1936.190) -- 0:35:16
193000 -- (-1908.445) [-1890.094] (-2057.169) (-1904.868) * [-1890.393] (-1910.273) (-2051.281) (-1931.561) -- 0:35:15
194000 -- [-1879.496] (-1904.013) (-2049.416) (-1903.763) * (-1891.618) [-1913.888] (-2069.899) (-1949.083) -- 0:35:18
195000 -- [-1876.894] (-1907.004) (-2079.283) (-1913.723) * (-1896.707) [-1901.127] (-2061.810) (-1940.124) -- 0:35:17
Average standard deviation of split frequencies: 0.039917
196000 -- [-1889.720] (-1932.120) (-2072.438) (-1919.793) * (-1913.892) [-1893.814] (-2066.052) (-1932.674) -- 0:35:20
197000 -- [-1892.258] (-1916.298) (-2056.117) (-1922.909) * (-1905.744) [-1895.095] (-2076.218) (-1929.056) -- 0:35:19
198000 -- [-1893.838] (-1928.657) (-2071.445) (-1905.652) * (-1908.844) [-1888.309] (-2070.158) (-1935.595) -- 0:35:22
199000 -- [-1901.060] (-1921.419) (-2067.599) (-1906.253) * (-1911.340) [-1886.788] (-2072.496) (-1923.857) -- 0:35:25
200000 -- [-1891.365] (-1929.166) (-2078.056) (-1889.245) * (-1907.016) [-1892.210] (-2061.174) (-1916.244) -- 0:35:24
Average standard deviation of split frequencies: 0.040513
201000 -- (-1900.837) (-1946.967) (-2088.349) [-1877.134] * (-1919.601) [-1888.743] (-2070.705) (-1917.186) -- 0:35:26
202000 -- (-1911.181) (-1935.584) (-2073.123) [-1877.821] * (-1931.454) [-1886.066] (-2058.770) (-1923.184) -- 0:35:25
203000 -- (-1899.446) (-1935.348) (-2039.286) [-1883.319] * (-1914.046) [-1884.656] (-2067.720) (-1923.035) -- 0:35:27
204000 -- (-1903.930) (-1916.968) (-2047.298) [-1889.424] * (-1916.702) [-1884.032] (-2086.957) (-1925.360) -- 0:35:26
205000 -- (-1907.844) (-1921.143) (-2047.084) [-1900.341] * (-1911.720) [-1877.692] (-2080.124) (-1917.819) -- 0:35:21
Average standard deviation of split frequencies: 0.040402
206000 -- (-1925.583) (-1923.672) (-2041.892) [-1895.406] * (-1913.243) [-1878.001] (-2087.005) (-1921.463) -- 0:35:16
207000 -- (-1927.003) (-1925.625) (-2053.543) [-1904.366] * (-1919.324) [-1877.895] (-2074.197) (-1903.734) -- 0:35:14
208000 -- (-1910.113) (-1921.343) (-2068.702) [-1917.770] * (-1915.036) [-1874.377] (-2062.624) (-1908.165) -- 0:35:09
209000 -- (-1905.473) (-1915.242) (-2054.227) [-1906.674] * (-1907.749) [-1885.453] (-2059.875) (-1911.050) -- 0:35:08
210000 -- (-1920.149) (-1899.083) (-2057.673) [-1905.498] * (-1911.662) [-1886.485] (-2083.561) (-1904.324) -- 0:35:02
Average standard deviation of split frequencies: 0.038504
211000 -- [-1924.436] (-1913.241) (-2064.752) (-1919.075) * (-1914.850) [-1885.166] (-2078.287) (-1905.545) -- 0:34:57
212000 -- (-1911.536) (-1905.424) (-2066.057) [-1902.767] * (-1920.315) [-1894.108] (-2067.797) (-1916.279) -- 0:34:56
213000 -- (-1904.078) (-1913.735) (-2060.166) [-1908.461] * [-1913.248] (-1895.531) (-2062.175) (-1933.131) -- 0:34:51
214000 -- (-1916.135) (-1907.302) (-2056.742) [-1902.780] * (-1917.893) [-1890.491] (-2050.234) (-1927.285) -- 0:34:46
215000 -- [-1899.248] (-1918.308) (-2071.847) (-1899.540) * (-1917.962) [-1896.528] (-2067.538) (-1917.511) -- 0:34:44
Average standard deviation of split frequencies: 0.037139
216000 -- [-1888.563] (-1941.227) (-2065.669) (-1912.358) * (-1914.654) [-1894.639] (-2073.274) (-1940.348) -- 0:34:39
217000 -- [-1894.096] (-1943.588) (-2036.651) (-1918.339) * (-1928.189) [-1908.011] (-2054.978) (-1946.315) -- 0:34:38
218000 -- [-1898.109] (-1938.626) (-2043.059) (-1932.471) * (-1962.146) [-1905.286] (-2046.434) (-1936.228) -- 0:34:33
219000 -- [-1886.742] (-1934.546) (-2025.694) (-1939.355) * (-1942.858) (-1915.279) (-2045.988) [-1925.732] -- 0:34:28
220000 -- (-1904.238) [-1908.705] (-2030.589) (-1934.504) * (-1952.094) [-1903.981] (-2046.327) (-1921.764) -- 0:34:23
Average standard deviation of split frequencies: 0.035433
221000 -- [-1896.633] (-1900.765) (-2046.653) (-1922.896) * (-1957.088) [-1900.940] (-2052.724) (-1936.904) -- 0:34:22
222000 -- (-1904.842) [-1903.736] (-2056.041) (-1929.732) * (-1929.515) [-1895.934] (-2041.145) (-1914.541) -- 0:34:17
223000 -- [-1895.043] (-1907.101) (-2045.166) (-1943.031) * [-1920.378] (-1899.315) (-2043.919) (-1933.464) -- 0:34:15
224000 -- [-1905.914] (-1909.245) (-2049.884) (-1922.027) * (-1918.842) [-1897.275] (-2036.217) (-1942.008) -- 0:34:10
225000 -- (-1909.621) [-1900.992] (-2061.175) (-1906.590) * (-1921.865) [-1898.659] (-2053.652) (-1935.557) -- 0:34:06
Average standard deviation of split frequencies: 0.033554
226000 -- (-1916.756) (-1906.780) (-2052.620) [-1909.413] * (-1911.225) [-1900.985] (-2075.017) (-1935.291) -- 0:34:04
227000 -- (-1911.769) (-1908.462) (-2060.249) [-1902.789] * (-1914.207) [-1908.076] (-2066.694) (-1927.531) -- 0:33:59
228000 -- (-1921.190) (-1903.575) (-2062.820) [-1908.396] * (-1911.953) [-1898.662] (-2066.173) (-1928.451) -- 0:33:58
229000 -- (-1923.655) (-1919.131) (-2066.729) [-1899.127] * (-1928.705) [-1896.785] (-2074.482) (-1922.058) -- 0:33:53
230000 -- (-1913.673) (-1919.835) (-2062.098) [-1890.283] * (-1912.721) [-1906.945] (-2063.841) (-1952.351) -- 0:33:48
Average standard deviation of split frequencies: 0.032448
231000 -- (-1930.958) [-1907.300] (-2056.974) (-1890.727) * (-1914.583) (-1917.143) (-2066.320) [-1912.654] -- 0:33:47
232000 -- (-1938.338) [-1895.636] (-2056.427) (-1900.541) * [-1908.861] (-1928.184) (-2074.510) (-1905.024) -- 0:33:42
233000 -- (-1939.287) (-1903.640) (-2062.460) [-1906.850] * [-1911.933] (-1936.189) (-2075.325) (-1911.392) -- 0:33:41
234000 -- (-1942.305) [-1899.218] (-2057.782) (-1911.449) * [-1905.823] (-1915.895) (-2062.723) (-1910.516) -- 0:33:36
235000 -- (-1944.837) [-1907.389] (-2044.797) (-1919.048) * (-1909.697) (-1925.103) (-2077.232) [-1904.608] -- 0:33:31
Average standard deviation of split frequencies: 0.032345
236000 -- (-1924.013) [-1914.104] (-2051.195) (-1928.029) * (-1917.838) (-1922.047) (-2093.398) [-1908.834] -- 0:33:27
237000 -- (-1933.940) (-1915.787) (-2056.416) [-1904.124] * (-1924.963) (-1928.872) (-2075.157) [-1897.982] -- 0:33:22
238000 -- (-1945.209) [-1900.431] (-2048.293) (-1898.865) * (-1908.090) (-1923.953) (-2073.399) [-1887.138] -- 0:33:17
239000 -- (-1949.772) (-1922.339) (-2039.510) [-1893.356] * (-1920.006) (-1908.784) (-2058.945) [-1895.664] -- 0:33:16
240000 -- (-1960.522) (-1939.672) (-2042.573) [-1894.072] * (-1907.733) (-1915.103) (-2070.033) [-1900.186] -- 0:33:11
Average standard deviation of split frequencies: 0.032611
241000 -- (-1951.263) (-1924.700) (-2042.881) [-1892.927] * (-1929.308) (-1914.765) (-2078.667) [-1912.420] -- 0:33:07
242000 -- (-1947.138) (-1922.159) (-2052.744) [-1899.730] * (-1923.354) (-1914.423) (-2075.719) [-1921.557] -- 0:33:02
243000 -- (-1926.193) (-1932.741) (-2060.228) [-1896.688] * (-1946.998) (-1918.103) (-2069.309) [-1909.513] -- 0:32:58
244000 -- (-1928.962) (-1917.225) (-2055.546) [-1901.573] * (-1959.947) [-1915.047] (-2070.933) (-1906.501) -- 0:32:56
245000 -- (-1938.289) (-1926.448) (-2053.166) [-1904.431] * (-1939.249) (-1909.867) (-2068.323) [-1902.244] -- 0:32:52
Average standard deviation of split frequencies: 0.031803
246000 -- (-1930.432) (-1925.823) (-2031.125) [-1895.132] * (-1929.277) (-1910.575) (-2067.066) [-1901.534] -- 0:32:50
247000 -- (-1924.717) (-1920.878) (-2029.716) [-1887.653] * (-1935.923) (-1922.471) (-2066.785) [-1904.422] -- 0:32:46
248000 -- (-1908.019) (-1944.925) (-2049.724) [-1891.043] * (-1945.468) (-1932.624) (-2057.908) [-1906.227] -- 0:32:41
249000 -- (-1907.129) (-1948.695) (-2064.351) [-1880.790] * (-1938.695) (-1908.332) (-2068.649) [-1910.863] -- 0:32:40
250000 -- (-1902.905) (-1925.469) (-2034.986) [-1887.806] * (-1932.485) [-1898.763] (-2073.845) (-1920.142) -- 0:32:36
Average standard deviation of split frequencies: 0.030815
251000 -- (-1921.342) (-1936.861) (-2044.996) [-1899.978] * (-1935.976) [-1917.805] (-2080.666) (-1911.657) -- 0:32:31
252000 -- (-1925.062) (-1928.950) (-2040.636) [-1894.385] * (-1931.813) [-1903.831] (-2076.760) (-1922.174) -- 0:32:30
253000 -- (-1915.459) (-1920.189) (-2054.032) [-1885.655] * (-1932.605) [-1907.797] (-2080.306) (-1918.430) -- 0:32:25
254000 -- (-1917.316) (-1942.367) (-2047.420) [-1877.966] * (-1939.243) (-1909.524) (-2068.737) [-1906.008] -- 0:32:24
255000 -- (-1924.226) (-1936.079) (-2057.794) [-1894.879] * (-1962.450) (-1893.998) (-2062.832) [-1908.782] -- 0:32:22
Average standard deviation of split frequencies: 0.029818
256000 -- (-1925.273) (-1928.125) (-2061.990) [-1880.614] * (-1943.362) (-1909.895) (-2059.738) [-1916.151] -- 0:32:18
257000 -- (-1922.822) (-1945.179) (-2061.555) [-1887.173] * (-1936.451) (-1909.950) (-2084.965) [-1917.626] -- 0:32:17
258000 -- (-1920.433) (-1937.210) (-2052.571) [-1889.468] * (-1927.738) (-1917.801) (-2075.299) [-1919.401] -- 0:32:12
259000 -- (-1920.150) (-1938.351) (-2057.899) [-1898.581] * (-1929.008) [-1909.812] (-2076.846) (-1898.334) -- 0:32:08
260000 -- [-1922.693] (-1932.228) (-2050.412) (-1918.580) * (-1918.806) [-1898.932] (-2086.842) (-1903.223) -- 0:32:06
Average standard deviation of split frequencies: 0.029443
261000 -- [-1931.962] (-1940.334) (-2040.513) (-1919.043) * (-1917.254) [-1899.113] (-2085.797) (-1904.457) -- 0:32:08
262000 -- (-1925.456) [-1930.917] (-2043.427) (-1930.334) * (-1930.603) [-1910.466] (-2082.174) (-1907.427) -- 0:32:06
263000 -- (-1921.167) (-1941.317) (-2050.337) [-1902.227] * (-1941.282) [-1908.113] (-2081.545) (-1908.178) -- 0:32:07
264000 -- (-1921.082) (-1935.781) (-2047.779) [-1901.878] * (-1915.884) (-1887.369) (-2077.841) [-1909.517] -- 0:32:06
265000 -- (-1958.307) (-1935.416) (-2049.029) [-1892.201] * (-1926.385) [-1893.518] (-2085.338) (-1914.399) -- 0:32:07
Average standard deviation of split frequencies: 0.028790
266000 -- (-1925.891) (-1958.252) (-2052.630) [-1889.086] * (-1914.402) [-1886.649] (-2063.853) (-1911.046) -- 0:32:08
267000 -- (-1921.846) (-1919.153) (-2070.132) [-1894.797] * (-1921.500) [-1893.435] (-2059.731) (-1932.777) -- 0:32:07
268000 -- (-1917.819) (-1933.487) (-2039.820) [-1904.514] * (-1908.709) [-1895.164] (-2056.585) (-1919.235) -- 0:32:08
269000 -- (-1923.759) (-1936.537) (-2049.536) [-1892.361] * (-1952.273) [-1893.819] (-2070.681) (-1907.673) -- 0:32:03
270000 -- (-1941.518) (-1921.489) (-2051.800) [-1898.278] * (-1940.843) [-1903.532] (-2053.026) (-1914.712) -- 0:32:02
Average standard deviation of split frequencies: 0.028050
271000 -- (-1938.731) (-1913.707) (-2050.173) [-1899.302] * (-1938.222) [-1897.415] (-2069.751) (-1903.476) -- 0:31:57
272000 -- (-1932.686) (-1903.228) (-2039.544) [-1902.574] * (-1925.674) [-1905.382] (-2082.875) (-1900.182) -- 0:31:53
273000 -- (-1929.361) [-1901.809] (-2043.042) (-1902.526) * (-1926.124) (-1909.466) (-2079.059) [-1908.009] -- 0:31:49
274000 -- (-1927.019) (-1925.490) (-2054.270) [-1898.698] * (-1942.497) (-1916.670) (-2094.755) [-1903.420] -- 0:31:47
275000 -- (-1934.932) (-1909.090) (-2064.795) [-1900.531] * (-1961.239) (-1906.342) (-2098.520) [-1886.895] -- 0:31:48
Average standard deviation of split frequencies: 0.027538
276000 -- (-1950.544) (-1920.374) (-2051.733) [-1896.374] * (-1937.357) (-1906.900) (-2081.317) [-1886.819] -- 0:31:47
277000 -- (-1928.707) (-1937.176) (-2072.337) [-1903.193] * (-1948.669) [-1896.020] (-2078.071) (-1892.444) -- 0:31:47
278000 -- (-1924.111) (-1944.998) (-2063.780) [-1902.266] * (-1952.709) (-1909.331) (-2071.529) [-1893.195] -- 0:31:46
279000 -- (-1927.124) (-1947.220) (-2064.785) [-1894.858] * (-1953.832) (-1905.100) (-2065.222) [-1901.267] -- 0:31:47
280000 -- (-1920.967) (-1951.896) (-2050.309) [-1894.418] * (-1924.481) (-1903.556) (-2075.460) [-1893.843] -- 0:31:48
Average standard deviation of split frequencies: 0.025312
281000 -- (-1914.449) (-1937.370) (-2056.188) [-1907.171] * (-1921.304) (-1928.790) (-2071.451) [-1893.234] -- 0:31:46
282000 -- [-1913.710] (-1955.025) (-2063.301) (-1915.304) * (-1913.705) (-1906.346) (-2074.228) [-1891.051] -- 0:31:47
283000 -- [-1912.314] (-1937.474) (-2066.534) (-1918.319) * (-1903.053) (-1914.786) (-2078.977) [-1894.484] -- 0:31:45
284000 -- [-1901.583] (-1944.343) (-2071.694) (-1910.988) * [-1900.314] (-1902.936) (-2086.106) (-1900.378) -- 0:31:45
285000 -- [-1900.977] (-1945.476) (-2067.839) (-1923.041) * [-1896.183] (-1924.263) (-2070.953) (-1908.900) -- 0:31:46
Average standard deviation of split frequencies: 0.024127
286000 -- [-1902.332] (-1930.095) (-2057.514) (-1921.200) * (-1910.240) (-1919.344) (-2076.660) [-1885.296] -- 0:31:44
287000 -- [-1905.274] (-1943.775) (-2084.504) (-1907.868) * (-1926.765) (-1919.940) (-2081.880) [-1891.360] -- 0:31:45
288000 -- (-1917.660) [-1916.896] (-2070.075) (-1915.832) * (-1922.916) (-1893.331) (-2093.369) [-1893.580] -- 0:31:46
289000 -- (-1922.300) (-1923.636) (-2064.770) [-1899.971] * (-1910.330) (-1891.848) (-2081.907) [-1893.107] -- 0:31:44
290000 -- (-1911.249) (-1933.081) (-2060.948) [-1913.162] * [-1911.519] (-1913.979) (-2079.093) (-1898.951) -- 0:31:44
Average standard deviation of split frequencies: 0.022848
291000 -- [-1915.673] (-1925.041) (-2051.820) (-1925.382) * [-1901.900] (-1923.201) (-2086.137) (-1904.159) -- 0:31:42
292000 -- [-1902.391] (-1921.649) (-2061.770) (-1928.648) * (-1901.558) (-1930.239) (-2068.426) [-1903.638] -- 0:31:43
293000 -- (-1898.260) [-1919.541] (-2054.834) (-1939.027) * [-1903.272] (-1931.186) (-2070.022) (-1909.936) -- 0:31:43
294000 -- [-1898.662] (-1915.489) (-2067.859) (-1959.828) * [-1908.014] (-1912.521) (-2075.205) (-1937.536) -- 0:31:41
295000 -- [-1902.445] (-1939.454) (-2078.348) (-1915.844) * [-1907.173] (-1908.261) (-2080.085) (-1908.037) -- 0:31:39
Average standard deviation of split frequencies: 0.022604
296000 -- (-1907.511) [-1916.913] (-2066.232) (-1928.619) * [-1901.103] (-1932.615) (-2069.135) (-1914.094) -- 0:31:40
297000 -- [-1892.874] (-1919.490) (-2058.515) (-1928.775) * [-1894.576] (-1913.241) (-2062.521) (-1905.579) -- 0:31:40
298000 -- (-1917.821) [-1909.610] (-2061.343) (-1928.191) * [-1904.670] (-1897.364) (-2062.556) (-1921.540) -- 0:31:38
299000 -- [-1905.809] (-1924.948) (-2053.526) (-1915.912) * (-1908.998) [-1892.526] (-2075.443) (-1923.536) -- 0:31:39
300000 -- [-1901.378] (-1936.934) (-2054.922) (-1938.983) * (-1896.884) [-1895.059] (-2083.569) (-1922.859) -- 0:31:39
Average standard deviation of split frequencies: 0.021950
301000 -- [-1887.009] (-1937.165) (-2074.146) (-1931.902) * (-1914.949) [-1890.527] (-2101.386) (-1923.968) -- 0:31:37
302000 -- [-1893.939] (-1935.635) (-2054.936) (-1934.835) * (-1913.636) [-1898.808] (-2087.212) (-1935.497) -- 0:31:37
303000 -- [-1911.724] (-1933.640) (-2056.919) (-1921.060) * (-1900.665) [-1900.947] (-2075.557) (-1926.520) -- 0:31:35
304000 -- [-1912.531] (-1933.355) (-2050.718) (-1942.193) * (-1924.655) [-1905.871] (-2082.337) (-1904.358) -- 0:31:31
305000 -- [-1916.709] (-1937.187) (-2061.082) (-1957.242) * (-1917.244) [-1889.635] (-2076.852) (-1908.948) -- 0:31:26
Average standard deviation of split frequencies: 0.021017
306000 -- (-1911.880) [-1926.221] (-2057.766) (-1942.741) * (-1920.806) [-1892.475] (-2084.508) (-1906.586) -- 0:31:24
307000 -- (-1908.300) [-1918.940] (-2072.625) (-1943.452) * (-1946.730) [-1896.694] (-2105.382) (-1895.399) -- 0:31:20
308000 -- [-1917.964] (-1914.403) (-2067.832) (-1956.141) * (-1936.263) [-1921.691] (-2096.402) (-1894.706) -- 0:31:18
309000 -- (-1909.278) [-1913.767] (-2060.315) (-1943.553) * (-1942.699) (-1919.981) (-2101.479) [-1902.091] -- 0:31:13
310000 -- (-1935.148) [-1910.504] (-2053.922) (-1939.231) * (-1947.339) [-1929.613] (-2116.891) (-1905.881) -- 0:31:09
Average standard deviation of split frequencies: 0.021731
311000 -- [-1906.458] (-1913.906) (-2059.439) (-1928.769) * (-1947.600) (-1910.386) (-2092.192) [-1914.104] -- 0:31:07
312000 -- (-1909.694) [-1904.030] (-2040.261) (-1941.828) * (-1924.484) (-1915.358) (-2080.003) [-1905.809] -- 0:31:03
313000 -- (-1900.226) [-1909.891] (-2059.790) (-1920.942) * (-1920.681) (-1914.907) (-2093.000) [-1905.612] -- 0:31:01
314000 -- (-1922.788) [-1911.543] (-2073.827) (-1914.477) * (-1930.637) (-1937.951) (-2072.872) [-1909.531] -- 0:30:57
315000 -- (-1917.256) (-1945.508) (-2064.423) [-1907.761] * (-1913.372) (-1933.332) (-2078.810) [-1910.083] -- 0:30:52
Average standard deviation of split frequencies: 0.022350
316000 -- (-1909.452) (-1945.175) (-2072.182) [-1893.452] * [-1905.334] (-1937.864) (-2082.874) (-1917.089) -- 0:30:50
317000 -- (-1908.957) (-1940.495) (-2053.257) [-1887.190] * (-1900.428) (-1934.239) (-2081.255) [-1905.683] -- 0:30:46
318000 -- (-1914.132) (-1958.595) (-2054.255) [-1890.508] * (-1910.512) (-1923.855) (-2079.238) [-1907.026] -- 0:30:42
319000 -- (-1906.678) (-1955.553) (-2063.198) [-1876.716] * (-1914.593) (-1927.971) (-2083.376) [-1904.346] -- 0:30:40
320000 -- (-1909.717) (-1942.900) (-2058.312) [-1885.856] * [-1918.952] (-1970.155) (-2068.706) (-1922.923) -- 0:30:36
Average standard deviation of split frequencies: 0.022865
321000 -- [-1896.757] (-1935.243) (-2049.474) (-1889.960) * [-1898.899] (-1951.278) (-2062.251) (-1912.470) -- 0:30:31
322000 -- [-1898.695] (-1951.492) (-2056.360) (-1920.486) * [-1898.820] (-1930.411) (-2055.170) (-1915.439) -- 0:30:27
323000 -- [-1905.477] (-1941.063) (-2028.482) (-1920.173) * [-1895.003] (-1934.346) (-2070.271) (-1909.688) -- 0:30:25
324000 -- [-1894.159] (-1933.448) (-2045.512) (-1915.215) * [-1893.108] (-1942.650) (-2072.276) (-1932.338) -- 0:30:21
325000 -- [-1896.433] (-1938.912) (-2044.853) (-1911.766) * [-1897.338] (-1948.000) (-2070.248) (-1899.061) -- 0:30:17
Average standard deviation of split frequencies: 0.023618
326000 -- [-1894.975] (-1941.963) (-2063.868) (-1923.538) * [-1893.556] (-1950.215) (-2075.802) (-1897.076) -- 0:30:15
327000 -- [-1884.759] (-1946.056) (-2066.935) (-1918.007) * [-1898.481] (-1940.586) (-2071.920) (-1941.627) -- 0:30:11
328000 -- [-1884.757] (-1937.208) (-2066.068) (-1915.950) * [-1897.649] (-1932.188) (-2080.447) (-1932.939) -- 0:30:07
329000 -- [-1882.900] (-1915.765) (-2058.137) (-1929.369) * [-1913.228] (-1937.081) (-2092.374) (-1922.241) -- 0:30:04
330000 -- [-1888.568] (-1919.044) (-2048.301) (-1917.114) * [-1921.426] (-1943.921) (-2063.079) (-1908.949) -- 0:30:00
Average standard deviation of split frequencies: 0.024536
331000 -- [-1903.430] (-1914.813) (-2062.079) (-1932.531) * [-1903.558] (-1954.163) (-2072.378) (-1911.990) -- 0:29:58
332000 -- [-1891.053] (-1929.184) (-2058.222) (-1924.871) * (-1923.736) [-1916.583] (-2064.499) (-1914.827) -- 0:29:54
333000 -- [-1886.633] (-1931.796) (-2051.674) (-1900.347) * [-1916.048] (-1917.152) (-2050.760) (-1937.150) -- 0:29:50
334000 -- [-1892.855] (-1914.895) (-2058.031) (-1925.493) * [-1924.514] (-1921.231) (-2060.587) (-1919.888) -- 0:29:48
335000 -- [-1898.001] (-1917.690) (-2054.210) (-1903.529) * (-1925.748) [-1914.325] (-2059.219) (-1932.689) -- 0:29:44
Average standard deviation of split frequencies: 0.024352
336000 -- (-1895.920) (-1919.155) (-2059.686) [-1899.963] * (-1907.575) [-1909.446] (-2068.144) (-1933.086) -- 0:29:42
337000 -- [-1890.808] (-1949.885) (-2071.961) (-1906.155) * (-1921.083) [-1916.192] (-2060.752) (-1933.583) -- 0:29:38
338000 -- [-1889.254] (-1930.288) (-2051.402) (-1909.578) * [-1903.280] (-1924.741) (-2059.679) (-1940.263) -- 0:29:36
339000 -- [-1888.634] (-1926.609) (-2045.660) (-1922.645) * (-1921.588) [-1919.724] (-2068.056) (-1955.275) -- 0:29:32
340000 -- [-1885.089] (-1914.588) (-2056.176) (-1928.756) * (-1934.706) [-1923.833] (-2077.684) (-1942.069) -- 0:29:28
Average standard deviation of split frequencies: 0.024757
341000 -- (-1899.154) [-1904.878] (-2052.318) (-1908.028) * (-1920.248) [-1913.023] (-2062.879) (-1933.137) -- 0:29:26
342000 -- [-1899.217] (-1924.763) (-2061.609) (-1897.045) * (-1908.681) [-1896.595] (-2053.407) (-1913.434) -- 0:29:22
343000 -- [-1897.601] (-1926.870) (-2041.742) (-1902.570) * (-1907.360) [-1905.401] (-2062.343) (-1936.008) -- 0:29:20
344000 -- [-1897.039] (-1927.902) (-2037.049) (-1899.630) * (-1904.151) [-1905.077] (-2075.542) (-1932.314) -- 0:29:16
345000 -- [-1889.316] (-1928.404) (-2044.423) (-1897.710) * (-1916.703) [-1900.262] (-2098.481) (-1936.381) -- 0:29:12
Average standard deviation of split frequencies: 0.024208
346000 -- (-1902.122) (-1912.065) (-2043.693) [-1896.808] * (-1915.513) [-1903.088] (-2079.183) (-1932.975) -- 0:29:08
347000 -- [-1893.102] (-1924.727) (-2043.176) (-1909.263) * (-1907.738) [-1905.617] (-2075.461) (-1933.301) -- 0:29:06
348000 -- [-1889.872] (-1921.312) (-2074.273) (-1905.315) * [-1884.818] (-1906.415) (-2078.936) (-1919.788) -- 0:29:02
349000 -- [-1890.817] (-1934.535) (-2067.383) (-1916.286) * [-1893.984] (-1932.194) (-2069.539) (-1914.622) -- 0:28:58
350000 -- [-1886.032] (-1914.925) (-2073.038) (-1904.653) * (-1899.313) [-1914.054] (-2081.726) (-1910.009) -- 0:28:56
Average standard deviation of split frequencies: 0.023861
351000 -- [-1896.291] (-1921.127) (-2068.262) (-1899.656) * [-1901.608] (-1905.281) (-2082.272) (-1925.070) -- 0:28:52
352000 -- (-1898.525) (-1914.248) (-2071.864) [-1900.279] * [-1903.216] (-1898.439) (-2090.526) (-1930.200) -- 0:28:48
353000 -- [-1896.764] (-1936.387) (-2055.878) (-1905.047) * (-1891.808) [-1901.717] (-2092.320) (-1949.727) -- 0:28:46
354000 -- [-1898.048] (-1931.518) (-2076.740) (-1913.568) * [-1908.097] (-1900.892) (-2085.004) (-1934.720) -- 0:28:42
355000 -- [-1900.275] (-1910.856) (-2071.525) (-1896.253) * (-1905.271) [-1903.434] (-2085.569) (-1957.149) -- 0:28:38
Average standard deviation of split frequencies: 0.023347
356000 -- (-1894.172) [-1895.651] (-2053.905) (-1916.590) * [-1899.520] (-1918.350) (-2063.190) (-1944.497) -- 0:28:34
357000 -- (-1903.378) [-1903.521] (-2077.697) (-1914.109) * [-1904.706] (-1913.551) (-2064.648) (-1926.301) -- 0:28:32
358000 -- (-1909.285) (-1918.414) (-2062.144) [-1906.151] * [-1898.899] (-1929.296) (-2059.626) (-1921.959) -- 0:28:29
359000 -- (-1929.012) (-1911.929) (-2072.179) [-1903.058] * (-1903.626) (-1931.381) (-2079.674) [-1917.447] -- 0:28:25
360000 -- (-1941.142) [-1908.974] (-2072.522) (-1900.058) * [-1902.512] (-1921.701) (-2081.098) (-1927.097) -- 0:28:23
Average standard deviation of split frequencies: 0.023527
361000 -- [-1908.837] (-1915.035) (-2077.622) (-1924.185) * (-1895.805) [-1918.111] (-2084.552) (-1928.715) -- 0:28:19
362000 -- [-1897.315] (-1914.290) (-2062.968) (-1909.841) * [-1886.176] (-1916.887) (-2091.789) (-1915.996) -- 0:28:17
363000 -- [-1902.963] (-1902.823) (-2054.303) (-1910.642) * [-1878.731] (-1929.792) (-2090.862) (-1907.975) -- 0:28:13
364000 -- [-1896.241] (-1924.329) (-2043.033) (-1895.053) * (-1895.008) (-1917.386) (-2084.183) [-1905.071] -- 0:28:11
365000 -- [-1898.595] (-1923.079) (-2026.640) (-1889.179) * (-1901.358) (-1933.817) (-2072.121) [-1911.844] -- 0:28:07
Average standard deviation of split frequencies: 0.023478
366000 -- (-1920.095) (-1913.135) (-2033.811) [-1897.913] * [-1899.956] (-1922.301) (-2077.957) (-1916.637) -- 0:28:03
367000 -- (-1918.972) [-1912.279] (-2036.978) (-1932.921) * [-1888.938] (-1908.593) (-2082.954) (-1925.229) -- 0:28:01
368000 -- (-1920.563) (-1912.548) (-2036.273) [-1917.147] * [-1891.412] (-1905.710) (-2081.611) (-1938.883) -- 0:27:57
369000 -- (-1912.616) (-1905.892) (-2033.574) [-1901.582] * [-1904.210] (-1921.964) (-2068.096) (-1944.477) -- 0:27:54
370000 -- (-1937.472) (-1915.956) (-2047.570) [-1895.352] * [-1892.799] (-1900.268) (-2088.351) (-1931.674) -- 0:27:52
Average standard deviation of split frequencies: 0.023755
371000 -- (-1945.127) [-1911.264] (-2049.394) (-1907.344) * [-1902.448] (-1899.660) (-2083.676) (-1945.789) -- 0:27:48
372000 -- (-1938.754) [-1884.940] (-2058.947) (-1926.019) * (-1905.887) [-1894.529] (-2076.952) (-1943.242) -- 0:27:46
373000 -- (-1935.572) [-1900.615] (-2042.909) (-1925.655) * (-1912.208) [-1899.624] (-2085.295) (-1930.462) -- 0:27:44
374000 -- (-1941.855) (-1894.135) (-2039.057) [-1914.271] * (-1898.441) [-1898.657] (-2067.131) (-1930.580) -- 0:27:40
375000 -- (-1934.897) [-1898.572] (-2050.212) (-1912.849) * (-1911.857) [-1901.849] (-2069.622) (-1911.417) -- 0:27:36
Average standard deviation of split frequencies: 0.022567
376000 -- [-1903.119] (-1914.442) (-2049.076) (-1903.256) * (-1918.739) (-1908.137) (-2066.417) [-1922.369] -- 0:27:34
377000 -- [-1895.477] (-1914.137) (-2047.212) (-1933.562) * (-1932.318) [-1916.229] (-2063.988) (-1922.734) -- 0:27:30
378000 -- (-1899.960) [-1908.569] (-2076.017) (-1937.879) * (-1920.956) (-1916.760) (-2056.089) [-1918.631] -- 0:27:28
379000 -- (-1923.379) [-1900.038] (-2063.485) (-1941.861) * (-1903.494) [-1911.014] (-2067.403) (-1912.783) -- 0:27:25
380000 -- (-1913.260) [-1900.498] (-2067.680) (-1934.460) * (-1910.077) [-1904.596] (-2053.532) (-1908.242) -- 0:27:23
Average standard deviation of split frequencies: 0.022998
381000 -- (-1909.708) [-1894.333] (-2055.314) (-1930.182) * [-1889.824] (-1908.715) (-2057.606) (-1913.904) -- 0:27:19
382000 -- (-1915.558) [-1903.336] (-2049.483) (-1944.560) * [-1886.509] (-1907.914) (-2066.732) (-1923.939) -- 0:27:17
383000 -- (-1909.054) [-1889.792] (-2053.064) (-1932.313) * [-1894.887] (-1913.576) (-2067.445) (-1905.658) -- 0:27:13
384000 -- (-1907.833) [-1893.264] (-2056.699) (-1917.726) * [-1891.044] (-1888.801) (-2065.154) (-1916.688) -- 0:27:11
385000 -- (-1901.598) [-1902.124] (-2042.441) (-1912.007) * [-1896.551] (-1911.584) (-2064.341) (-1942.894) -- 0:27:07
Average standard deviation of split frequencies: 0.023418
386000 -- (-1916.025) [-1894.820] (-2068.066) (-1915.649) * (-1903.211) [-1885.690] (-2064.146) (-1933.860) -- 0:27:05
387000 -- (-1916.704) [-1892.769] (-2062.123) (-1916.537) * (-1906.236) [-1890.841] (-2058.351) (-1943.235) -- 0:27:01
388000 -- (-1940.118) (-1896.419) (-2080.254) [-1906.944] * (-1907.160) [-1916.744] (-2053.407) (-1912.374) -- 0:26:58
389000 -- (-1939.644) [-1905.209] (-2065.529) (-1914.617) * (-1900.156) [-1920.230] (-2082.052) (-1918.909) -- 0:26:56
390000 -- (-1914.453) [-1892.035] (-2056.835) (-1903.982) * (-1904.159) [-1907.012] (-2068.071) (-1934.894) -- 0:26:52
Average standard deviation of split frequencies: 0.023185
391000 -- (-1911.134) [-1893.506] (-2046.008) (-1904.136) * (-1906.123) [-1892.817] (-2065.590) (-1945.999) -- 0:26:48
392000 -- (-1923.574) [-1886.460] (-2052.716) (-1918.904) * (-1904.346) [-1896.796] (-2062.043) (-1937.531) -- 0:26:46
393000 -- (-1911.278) [-1883.032] (-2053.771) (-1919.747) * [-1885.735] (-1897.065) (-2057.490) (-1940.528) -- 0:26:43
394000 -- (-1912.445) [-1880.318] (-2058.293) (-1908.252) * [-1895.333] (-1909.878) (-2055.637) (-1948.666) -- 0:26:41
395000 -- [-1898.405] (-1890.764) (-2067.313) (-1901.351) * (-1898.050) [-1906.468] (-2069.969) (-1955.319) -- 0:26:37
Average standard deviation of split frequencies: 0.022618
396000 -- (-1909.925) [-1899.551] (-2055.831) (-1927.717) * (-1909.198) [-1901.085] (-2089.847) (-1924.663) -- 0:26:35
397000 -- (-1908.682) [-1895.381] (-2047.730) (-1950.701) * (-1908.557) [-1905.084] (-2075.739) (-1949.659) -- 0:26:31
398000 -- (-1895.116) [-1903.768] (-2047.707) (-1951.657) * (-1921.289) [-1914.462] (-2087.143) (-1958.166) -- 0:26:29
399000 -- (-1908.007) [-1903.624] (-2049.970) (-1929.567) * (-1924.333) [-1897.699] (-2077.441) (-1954.026) -- 0:26:26
400000 -- (-1926.640) [-1893.549] (-2056.183) (-1931.805) * (-1917.747) [-1911.318] (-2074.700) (-1959.268) -- 0:26:24
Average standard deviation of split frequencies: 0.023006
401000 -- (-1926.820) [-1886.764] (-2049.339) (-1951.391) * (-1912.848) [-1906.130] (-2072.118) (-1956.641) -- 0:26:20
402000 -- (-1931.354) [-1894.756] (-2064.540) (-1948.967) * [-1906.834] (-1902.133) (-2078.898) (-1966.459) -- 0:26:18
403000 -- (-1919.169) [-1905.774] (-2051.813) (-1936.210) * (-1908.722) [-1900.220] (-2061.527) (-1936.813) -- 0:26:14
404000 -- (-1921.436) [-1903.361] (-2056.218) (-1958.688) * (-1913.580) [-1895.016] (-2067.765) (-1925.075) -- 0:26:11
405000 -- (-1908.949) [-1891.304] (-2068.532) (-1945.579) * (-1923.622) [-1887.426] (-2060.699) (-1933.464) -- 0:26:09
Average standard deviation of split frequencies: 0.022977
406000 -- (-1898.717) [-1893.222] (-2050.810) (-1932.281) * (-1920.758) [-1878.520] (-2065.357) (-1936.730) -- 0:26:05
407000 -- (-1911.761) [-1889.904] (-2064.014) (-1915.581) * (-1914.839) [-1894.683] (-2067.501) (-1933.557) -- 0:26:01
408000 -- (-1910.274) [-1895.598] (-2055.253) (-1925.859) * [-1910.577] (-1915.157) (-2059.382) (-1921.694) -- 0:25:58
409000 -- (-1906.220) [-1896.017] (-2061.364) (-1924.520) * (-1922.179) [-1910.150] (-2058.345) (-1925.105) -- 0:25:56
410000 -- (-1907.103) [-1897.363] (-2065.163) (-1941.660) * (-1927.042) [-1910.557] (-2062.261) (-1923.017) -- 0:25:52
Average standard deviation of split frequencies: 0.022374
411000 -- (-1914.097) [-1895.998] (-2061.552) (-1926.788) * (-1925.732) [-1913.693] (-2075.495) (-1922.679) -- 0:25:50
412000 -- (-1912.349) [-1902.229] (-2067.040) (-1949.993) * (-1925.822) [-1898.030] (-2077.503) (-1913.462) -- 0:25:47
413000 -- (-1942.983) [-1897.124] (-2065.440) (-1905.919) * (-1946.447) [-1897.071] (-2079.187) (-1910.867) -- 0:25:43
414000 -- (-1925.724) [-1896.132] (-2054.752) (-1919.077) * (-1928.781) [-1888.441] (-2074.639) (-1918.107) -- 0:25:40
415000 -- (-1919.252) [-1901.389] (-2049.493) (-1921.012) * (-1928.597) [-1897.590] (-2081.559) (-1915.071) -- 0:25:37
Average standard deviation of split frequencies: 0.022266
416000 -- (-1929.035) [-1896.857] (-2053.870) (-1900.952) * (-1940.241) (-1898.431) (-2071.507) [-1906.989] -- 0:25:34
417000 -- (-1934.441) [-1896.238] (-2049.063) (-1923.536) * (-1933.356) [-1890.583] (-2058.206) (-1909.198) -- 0:25:30
418000 -- (-1938.693) [-1895.039] (-2044.676) (-1934.210) * (-1914.302) (-1902.216) (-2069.973) [-1899.375] -- 0:25:28
419000 -- (-1928.108) [-1895.707] (-2036.316) (-1924.870) * (-1918.005) [-1899.075] (-2082.492) (-1902.047) -- 0:25:25
420000 -- (-1933.350) [-1900.015] (-2048.367) (-1930.540) * (-1921.294) (-1893.973) (-2068.594) [-1911.524] -- 0:25:23
Average standard deviation of split frequencies: 0.022471
421000 -- (-1959.924) [-1894.093] (-2056.513) (-1918.780) * (-1944.368) [-1901.108] (-2068.301) (-1910.167) -- 0:25:19
422000 -- (-1933.033) [-1900.829] (-2056.351) (-1931.696) * (-1930.463) (-1903.260) (-2074.994) [-1911.263] -- 0:25:17
423000 -- (-1903.271) [-1899.592] (-2050.219) (-1921.321) * (-1936.345) (-1910.043) (-2073.938) [-1911.537] -- 0:25:14
424000 -- (-1922.151) [-1899.926] (-2045.970) (-1911.685) * (-1933.781) [-1896.111] (-2057.390) (-1917.784) -- 0:25:12
425000 -- (-1924.025) [-1881.597] (-2034.869) (-1902.586) * (-1937.398) [-1907.489] (-2070.574) (-1903.920) -- 0:25:09
Average standard deviation of split frequencies: 0.022462
426000 -- (-1925.855) [-1894.214] (-2034.222) (-1914.002) * (-1947.860) [-1904.158] (-2083.281) (-1897.027) -- 0:25:06
427000 -- (-1927.457) [-1901.333] (-2066.167) (-1894.472) * (-1955.110) (-1905.240) (-2081.175) [-1912.732] -- 0:25:02
428000 -- (-1931.178) [-1899.618] (-2051.303) (-1906.637) * (-1943.368) [-1907.324] (-2073.335) (-1907.913) -- 0:25:00
429000 -- (-1927.092) [-1883.220] (-2057.170) (-1902.645) * (-1948.555) [-1885.316] (-2066.362) (-1915.951) -- 0:24:57
430000 -- (-1916.249) [-1892.820] (-2078.283) (-1923.696) * (-1943.105) [-1876.925] (-2078.230) (-1931.258) -- 0:24:55
Average standard deviation of split frequencies: 0.022910
431000 -- (-1932.010) (-1904.506) (-2071.881) [-1895.068] * (-1948.846) [-1887.904] (-2084.951) (-1922.248) -- 0:24:51
432000 -- (-1939.788) [-1893.082] (-2048.769) (-1912.249) * (-1926.512) [-1895.641] (-2086.164) (-1927.596) -- 0:24:49
433000 -- (-1936.523) (-1908.598) (-2032.785) [-1892.283] * (-1932.312) [-1897.312] (-2091.890) (-1920.421) -- 0:24:47
434000 -- (-1943.827) (-1909.671) (-2047.024) [-1905.068] * (-1940.508) [-1881.855] (-2080.141) (-1931.503) -- 0:24:46
435000 -- (-1928.356) (-1908.256) (-2039.428) [-1903.865] * (-1944.794) [-1890.237] (-2064.865) (-1908.384) -- 0:24:44
Average standard deviation of split frequencies: 0.022288
436000 -- (-1919.220) (-1929.011) (-2051.927) [-1899.878] * (-1935.761) [-1887.512] (-2071.101) (-1922.732) -- 0:24:43
437000 -- (-1926.897) (-1916.972) (-2044.955) [-1892.191] * (-1929.502) [-1885.948] (-2078.574) (-1912.891) -- 0:24:41
438000 -- (-1937.590) (-1920.757) (-2040.931) [-1898.939] * (-1938.978) [-1882.213] (-2060.240) (-1909.553) -- 0:24:40
439000 -- (-1908.554) (-1936.109) (-2046.484) [-1911.831] * (-1925.535) [-1881.520] (-2061.007) (-1905.027) -- 0:24:38
440000 -- (-1917.298) (-1948.837) (-2053.836) [-1902.931] * (-1910.249) [-1888.853] (-2070.541) (-1925.688) -- 0:24:37
Average standard deviation of split frequencies: 0.022596
441000 -- (-1926.929) (-1951.380) (-2050.888) [-1909.748] * (-1901.939) [-1882.257] (-2078.849) (-1940.690) -- 0:24:35
442000 -- (-1917.273) (-1953.324) (-2052.044) [-1913.363] * (-1916.415) [-1879.929] (-2074.330) (-1942.973) -- 0:24:34
443000 -- [-1914.753] (-1929.080) (-2065.254) (-1931.355) * (-1911.812) [-1881.550] (-2078.961) (-1930.454) -- 0:24:32
444000 -- [-1916.619] (-1934.440) (-2067.912) (-1941.559) * (-1906.827) [-1894.483] (-2085.481) (-1920.838) -- 0:24:31
445000 -- [-1908.495] (-1918.232) (-2058.214) (-1975.685) * (-1912.435) [-1887.531] (-2090.834) (-1930.217) -- 0:24:30
Average standard deviation of split frequencies: 0.022752
446000 -- [-1906.736] (-1915.723) (-2069.063) (-1943.964) * (-1918.592) [-1895.580] (-2076.293) (-1937.147) -- 0:24:28
447000 -- [-1908.619] (-1907.501) (-2072.566) (-1953.668) * (-1924.438) [-1883.882] (-2069.955) (-1925.835) -- 0:24:26
448000 -- [-1892.535] (-1909.969) (-2076.697) (-1929.945) * (-1922.175) [-1883.446] (-2082.971) (-1902.288) -- 0:24:25
449000 -- [-1903.416] (-1919.925) (-2068.623) (-1920.646) * (-1928.505) [-1882.477] (-2060.145) (-1905.815) -- 0:24:22
450000 -- [-1889.610] (-1916.315) (-2063.606) (-1919.723) * (-1942.993) [-1890.935] (-2067.641) (-1904.811) -- 0:24:21
Average standard deviation of split frequencies: 0.023086
451000 -- [-1897.516] (-1910.386) (-2044.016) (-1906.104) * (-1928.207) [-1891.463] (-2068.275) (-1910.310) -- 0:24:20
452000 -- [-1894.556] (-1895.432) (-2044.469) (-1918.133) * (-1926.948) [-1890.982] (-2072.210) (-1908.201) -- 0:24:18
453000 -- [-1882.630] (-1920.907) (-2043.254) (-1898.870) * (-1935.231) [-1889.397] (-2062.209) (-1918.453) -- 0:24:17
454000 -- [-1888.544] (-1925.379) (-2050.156) (-1901.906) * (-1929.651) [-1895.535] (-2066.073) (-1900.547) -- 0:24:15
455000 -- (-1886.523) (-1917.348) (-2059.140) [-1888.366] * (-1935.851) (-1901.345) (-2050.704) [-1896.924] -- 0:24:14
Average standard deviation of split frequencies: 0.023795
456000 -- [-1900.165] (-1901.906) (-2057.878) (-1921.799) * (-1947.178) [-1901.567] (-2053.804) (-1891.849) -- 0:24:10
457000 -- [-1892.611] (-1908.462) (-2062.039) (-1918.285) * (-1928.794) (-1908.173) (-2072.116) [-1890.207] -- 0:24:08
458000 -- (-1898.021) [-1910.755] (-2069.290) (-1913.797) * (-1937.315) [-1900.598] (-2075.923) (-1898.554) -- 0:24:04
459000 -- (-1918.235) [-1911.907] (-2061.991) (-1915.214) * (-1943.203) [-1906.837] (-2080.295) (-1900.569) -- 0:24:02
460000 -- (-1914.070) (-1931.660) (-2038.187) [-1902.874] * (-1933.882) (-1917.678) (-2072.753) [-1905.809] -- 0:23:59
Average standard deviation of split frequencies: 0.024326
461000 -- (-1919.687) (-1923.634) (-2035.246) [-1897.917] * (-1946.710) (-1905.948) (-2072.078) [-1914.751] -- 0:23:55
462000 -- (-1922.238) (-1948.655) (-2048.384) [-1912.466] * (-1943.559) (-1899.972) (-2069.317) [-1902.914] -- 0:23:53
463000 -- [-1910.983] (-1915.538) (-2044.659) (-1906.834) * (-1955.800) [-1908.889] (-2069.913) (-1904.227) -- 0:23:50
464000 -- [-1905.747] (-1928.887) (-2041.484) (-1910.052) * (-1927.227) (-1901.474) (-2067.019) [-1888.133] -- 0:23:47
465000 -- [-1907.237] (-1935.273) (-2056.276) (-1899.154) * (-1918.345) (-1912.288) (-2068.776) [-1883.111] -- 0:23:44
Average standard deviation of split frequencies: 0.024261
466000 -- [-1897.651] (-1935.723) (-2058.477) (-1894.714) * (-1918.871) (-1907.473) (-2082.122) [-1895.182] -- 0:23:40
467000 -- [-1905.353] (-1946.898) (-2050.879) (-1897.878) * (-1921.972) (-1940.435) (-2075.823) [-1912.486] -- 0:23:38
468000 -- (-1906.926) (-1938.716) (-2056.270) [-1905.191] * (-1923.927) (-1948.932) (-2069.032) [-1911.656] -- 0:23:35
469000 -- (-1904.545) (-1947.226) (-2051.577) [-1902.376] * [-1923.178] (-1935.978) (-2066.009) (-1918.446) -- 0:23:31
470000 -- (-1921.087) (-1933.226) (-2062.524) [-1891.074] * (-1927.514) (-1917.938) (-2067.812) [-1919.988] -- 0:23:29
Average standard deviation of split frequencies: 0.024196
471000 -- (-1918.093) (-1942.873) (-2051.507) [-1893.449] * (-1921.929) (-1937.543) (-2048.702) [-1903.424] -- 0:23:27
472000 -- (-1923.596) (-1940.600) (-2040.459) [-1901.278] * [-1925.934] (-1943.943) (-2057.493) (-1903.720) -- 0:23:26
473000 -- (-1920.319) (-1959.321) (-2041.504) [-1906.081] * (-1918.525) (-1914.353) (-2060.587) [-1914.329] -- 0:23:23
474000 -- (-1919.731) (-1948.755) (-2026.600) [-1907.015] * (-1920.420) (-1927.518) (-2067.702) [-1907.412] -- 0:23:21
475000 -- [-1901.777] (-1956.451) (-2038.728) (-1920.917) * [-1904.988] (-1929.217) (-2056.594) (-1909.574) -- 0:23:20
Average standard deviation of split frequencies: 0.024255
476000 -- [-1909.752] (-1921.360) (-2031.210) (-1928.161) * (-1910.931) (-1943.108) (-2056.207) [-1910.243] -- 0:23:19
477000 -- [-1918.216] (-1926.922) (-2047.520) (-1888.957) * (-1909.488) (-1941.450) (-2056.914) [-1896.911] -- 0:23:16
478000 -- (-1903.815) (-1953.217) (-2058.792) [-1898.348] * (-1907.087) (-1937.762) (-2044.125) [-1901.716] -- 0:23:15
479000 -- [-1908.763] (-1926.614) (-2032.806) (-1910.376) * (-1928.065) (-1934.342) (-2057.340) [-1898.464] -- 0:23:13
480000 -- [-1906.533] (-1941.331) (-2026.862) (-1913.895) * (-1919.246) (-1937.609) (-2064.379) [-1890.563] -- 0:23:12
Average standard deviation of split frequencies: 0.024914
481000 -- [-1908.502] (-1920.240) (-2040.129) (-1911.331) * (-1899.682) (-1937.418) (-2069.014) [-1900.103] -- 0:23:09
482000 -- [-1904.381] (-1926.259) (-2042.869) (-1908.502) * [-1901.897] (-1932.705) (-2075.870) (-1907.418) -- 0:23:08
483000 -- [-1898.930] (-1930.724) (-2044.699) (-1909.395) * (-1918.290) (-1938.974) (-2072.230) [-1888.366] -- 0:23:06
484000 -- [-1914.191] (-1934.271) (-2036.396) (-1908.413) * (-1913.822) (-1939.816) (-2083.615) [-1891.244] -- 0:23:04
485000 -- [-1905.160] (-1923.052) (-2041.250) (-1891.281) * (-1911.793) (-1949.303) (-2082.175) [-1895.551] -- 0:23:02
Average standard deviation of split frequencies: 0.025560
486000 -- (-1918.884) (-1924.321) (-2069.277) [-1890.552] * (-1915.801) (-1934.057) (-2067.631) [-1907.597] -- 0:23:01
487000 -- (-1917.793) (-1915.581) (-2072.205) [-1895.295] * [-1895.535] (-1926.121) (-2064.810) (-1901.319) -- 0:22:59
488000 -- (-1913.213) (-1926.275) (-2062.465) [-1910.119] * [-1903.200] (-1940.424) (-2053.118) (-1912.955) -- 0:22:57
489000 -- [-1898.595] (-1930.025) (-2063.060) (-1904.186) * [-1904.795] (-1944.023) (-2047.942) (-1920.904) -- 0:22:56
490000 -- [-1917.728] (-1939.401) (-2046.357) (-1910.013) * [-1903.969] (-1938.978) (-2044.146) (-1903.278) -- 0:22:53
Average standard deviation of split frequencies: 0.025670
491000 -- (-1921.545) (-1935.541) (-2053.158) [-1911.309] * [-1901.179] (-1942.724) (-2082.637) (-1907.279) -- 0:22:51
492000 -- (-1930.893) (-1947.131) (-2061.476) [-1902.087] * [-1896.966] (-1934.371) (-2057.282) (-1917.491) -- 0:22:50
493000 -- [-1918.219] (-1940.085) (-2058.200) (-1912.593) * [-1902.183] (-1919.071) (-2058.155) (-1926.145) -- 0:22:47
494000 -- (-1944.970) [-1911.199] (-2059.456) (-1918.785) * [-1906.210] (-1924.210) (-2072.559) (-1924.964) -- 0:22:45
495000 -- (-1941.349) [-1901.461] (-2047.363) (-1924.652) * [-1905.618] (-1931.154) (-2062.524) (-1917.861) -- 0:22:44
Average standard deviation of split frequencies: 0.025945
496000 -- (-1950.769) [-1895.785] (-2056.192) (-1924.873) * (-1911.578) (-1922.696) (-2069.696) [-1911.968] -- 0:22:41
497000 -- (-1938.940) [-1885.766] (-2043.697) (-1914.985) * (-1926.272) [-1915.609] (-2071.902) (-1912.782) -- 0:22:39
498000 -- (-1914.333) [-1886.320] (-2051.517) (-1917.060) * (-1925.985) (-1917.322) (-2086.384) [-1916.646] -- 0:22:37
499000 -- (-1916.758) [-1887.248] (-2041.384) (-1928.548) * (-1927.773) [-1899.475] (-2074.528) (-1912.519) -- 0:22:35
500000 -- (-1934.987) [-1900.431] (-2065.647) (-1914.504) * (-1915.594) [-1905.527] (-2065.398) (-1921.868) -- 0:22:34
Average standard deviation of split frequencies: 0.026264
501000 -- (-1927.625) (-1913.457) (-2070.326) [-1918.071] * (-1911.583) [-1899.964] (-2058.309) (-1906.017) -- 0:22:31
502000 -- (-1928.640) (-1920.436) (-2058.739) [-1904.818] * (-1927.213) [-1894.257] (-2072.401) (-1923.161) -- 0:22:28
503000 -- (-1944.637) [-1910.112] (-2068.313) (-1912.317) * (-1917.193) [-1904.159] (-2070.387) (-1912.235) -- 0:22:25
504000 -- (-1937.154) [-1904.750] (-2068.865) (-1910.244) * (-1910.074) (-1903.083) (-2085.431) [-1906.890] -- 0:22:22
505000 -- (-1938.513) [-1895.317] (-2076.845) (-1911.625) * (-1927.159) (-1901.482) (-2099.095) [-1909.457] -- 0:22:19
Average standard deviation of split frequencies: 0.026282
506000 -- (-1925.965) [-1901.002] (-2077.773) (-1937.286) * (-1927.372) (-1900.757) (-2085.690) [-1885.976] -- 0:22:16
507000 -- (-1925.529) [-1900.567] (-2067.640) (-1913.010) * (-1924.079) (-1891.266) (-2085.987) [-1895.470] -- 0:22:14
508000 -- (-1919.987) [-1896.670] (-2071.391) (-1911.757) * (-1919.928) [-1896.627] (-2068.222) (-1906.259) -- 0:22:10
509000 -- (-1917.949) (-1908.933) (-2067.120) [-1901.714] * (-1947.575) [-1895.253] (-2075.758) (-1904.518) -- 0:22:07
510000 -- (-1940.610) (-1898.645) (-2061.139) [-1912.924] * (-1938.397) [-1884.142] (-2068.607) (-1911.972) -- 0:22:04
Average standard deviation of split frequencies: 0.026317
511000 -- (-1951.976) (-1914.845) (-2050.182) [-1895.571] * (-1924.503) [-1885.979] (-2068.805) (-1923.018) -- 0:22:01
512000 -- (-1947.690) (-1898.562) (-2064.501) [-1903.153] * (-1926.714) (-1881.152) (-2065.206) [-1914.598] -- 0:21:59
513000 -- (-1942.513) (-1909.360) (-2053.922) [-1906.132] * (-1917.888) [-1885.573] (-2066.871) (-1938.784) -- 0:21:55
514000 -- (-1942.099) (-1901.793) (-2057.228) [-1891.407] * (-1907.748) [-1887.020] (-2059.417) (-1931.197) -- 0:21:53
515000 -- (-1939.992) (-1902.751) (-2057.065) [-1888.458] * (-1915.839) [-1880.277] (-2059.391) (-1937.623) -- 0:21:49
Average standard deviation of split frequencies: 0.026189
516000 -- (-1941.962) (-1908.106) (-2053.426) [-1892.990] * (-1933.886) [-1883.378] (-2057.104) (-1926.103) -- 0:21:46
517000 -- (-1938.296) (-1899.007) (-2045.300) [-1883.457] * (-1921.054) [-1875.825] (-2054.387) (-1922.143) -- 0:21:43
518000 -- (-1922.451) (-1929.616) (-2057.197) [-1889.510] * (-1927.340) [-1873.819] (-2056.855) (-1927.234) -- 0:21:40
519000 -- (-1947.904) (-1907.848) (-2041.787) [-1877.506] * (-1938.661) [-1892.947] (-2075.164) (-1911.406) -- 0:21:37
520000 -- (-1935.844) (-1904.070) (-2043.936) [-1871.381] * (-1947.939) [-1900.296] (-2061.639) (-1913.753) -- 0:21:35
Average standard deviation of split frequencies: 0.026320
521000 -- (-1926.691) (-1904.877) (-2051.154) [-1879.431] * (-1940.213) [-1902.392] (-2060.541) (-1924.894) -- 0:21:31
522000 -- (-1918.953) (-1918.059) (-2058.919) [-1887.926] * (-1942.034) [-1894.977] (-2055.200) (-1909.741) -- 0:21:28
523000 -- (-1926.277) [-1895.120] (-2052.768) (-1884.017) * (-1963.723) (-1889.766) (-2064.660) [-1906.165] -- 0:21:25
524000 -- (-1920.979) [-1883.247] (-2061.442) (-1893.424) * (-1935.800) [-1905.166] (-2055.617) (-1911.849) -- 0:21:22
525000 -- (-1919.068) (-1897.188) (-2077.798) [-1894.114] * (-1912.562) [-1898.924] (-2075.942) (-1924.260) -- 0:21:20
Average standard deviation of split frequencies: 0.026084
526000 -- (-1927.631) [-1892.481] (-2076.766) (-1895.688) * (-1921.499) [-1893.983] (-2090.212) (-1928.096) -- 0:21:16
527000 -- (-1918.400) (-1905.130) (-2060.749) [-1894.508] * (-1937.601) [-1891.197] (-2072.277) (-1920.686) -- 0:21:13
528000 -- (-1923.661) [-1890.745] (-2066.767) (-1889.415) * (-1934.860) [-1883.543] (-2064.899) (-1922.125) -- 0:21:11
529000 -- (-1926.871) [-1892.765] (-2064.090) (-1896.754) * (-1900.338) [-1885.413] (-2072.379) (-1916.811) -- 0:21:08
530000 -- (-1911.421) [-1893.809] (-2061.331) (-1906.312) * (-1909.094) [-1898.302] (-2078.911) (-1929.959) -- 0:21:06
Average standard deviation of split frequencies: 0.025325
531000 -- (-1926.533) [-1879.996] (-2037.839) (-1889.328) * [-1902.498] (-1897.780) (-2074.856) (-1946.759) -- 0:21:04
532000 -- (-1927.265) (-1898.452) (-2043.395) [-1891.845] * (-1906.673) [-1892.622] (-2074.629) (-1939.945) -- 0:21:03
533000 -- (-1934.781) (-1896.584) (-2050.022) [-1892.869] * [-1892.142] (-1908.476) (-2076.130) (-1945.523) -- 0:21:00
534000 -- (-1913.609) [-1893.685] (-2061.698) (-1901.601) * [-1885.028] (-1905.844) (-2077.939) (-1935.526) -- 0:20:59
535000 -- (-1930.330) [-1903.252] (-2057.907) (-1902.856) * [-1886.462] (-1912.152) (-2085.325) (-1935.691) -- 0:20:56
Average standard deviation of split frequencies: 0.024626
536000 -- (-1932.205) (-1907.286) (-2061.422) [-1895.917] * [-1899.248] (-1906.834) (-2078.846) (-1927.343) -- 0:20:55
537000 -- (-1901.972) (-1920.547) (-2052.580) [-1898.283] * [-1896.181] (-1914.045) (-2081.293) (-1936.966) -- 0:20:52
538000 -- (-1908.441) (-1917.837) (-2037.746) [-1886.493] * [-1890.677] (-1905.601) (-2088.352) (-1952.007) -- 0:20:51
539000 -- (-1906.410) (-1924.195) (-2043.837) [-1895.480] * [-1915.278] (-1915.466) (-2084.810) (-1933.871) -- 0:20:48
540000 -- (-1908.043) (-1923.988) (-2070.962) [-1884.521] * (-1927.856) [-1897.244] (-2047.837) (-1942.853) -- 0:20:46
Average standard deviation of split frequencies: 0.023985
541000 -- (-1887.919) (-1931.047) (-2053.670) [-1892.006] * [-1918.102] (-1895.027) (-2055.069) (-1934.797) -- 0:20:44
542000 -- (-1896.000) (-1916.611) (-2064.452) [-1892.658] * (-1914.761) [-1898.485] (-2074.659) (-1927.754) -- 0:20:42
543000 -- (-1896.344) (-1918.309) (-2055.071) [-1896.621] * [-1912.814] (-1913.707) (-2067.129) (-1939.425) -- 0:20:40
544000 -- [-1897.359] (-1908.336) (-2034.527) (-1912.285) * [-1897.564] (-1910.002) (-2073.764) (-1936.282) -- 0:20:38
545000 -- (-1898.358) (-1928.243) (-2037.592) [-1899.500] * [-1904.298] (-1929.486) (-2085.701) (-1931.642) -- 0:20:35
Average standard deviation of split frequencies: 0.023978
546000 -- (-1905.067) (-1934.325) (-2029.112) [-1889.699] * [-1913.350] (-1918.490) (-2084.263) (-1920.513) -- 0:20:33
547000 -- [-1913.521] (-1940.561) (-2035.133) (-1912.705) * [-1901.961] (-1915.206) (-2071.088) (-1938.793) -- 0:20:29
548000 -- (-1914.119) (-1918.199) (-2066.518) [-1903.785] * (-1909.033) [-1903.191] (-2061.073) (-1959.550) -- 0:20:26
549000 -- (-1903.617) (-1923.489) (-2069.118) [-1889.420] * (-1903.591) [-1898.377] (-2056.191) (-1939.759) -- 0:20:23
550000 -- (-1910.734) (-1903.426) (-2045.882) [-1893.184] * (-1903.626) [-1894.208] (-2076.934) (-1943.008) -- 0:20:20
Average standard deviation of split frequencies: 0.023609
551000 -- (-1943.351) (-1901.107) (-2059.359) [-1877.718] * (-1902.960) [-1882.275] (-2066.620) (-1947.166) -- 0:20:17
552000 -- (-1911.874) (-1915.842) (-2051.723) [-1881.111] * [-1894.354] (-1902.936) (-2073.342) (-1939.748) -- 0:20:14
553000 -- (-1903.853) (-1919.599) (-2063.513) [-1893.927] * [-1897.704] (-1910.439) (-2068.189) (-1936.303) -- 0:20:11
554000 -- (-1899.246) (-1902.897) (-2048.391) [-1891.428] * (-1908.993) [-1898.109] (-2075.905) (-1961.296) -- 0:20:08
555000 -- [-1896.583] (-1928.508) (-2047.958) (-1916.422) * (-1917.571) [-1897.692] (-2089.554) (-1932.752) -- 0:20:05
Average standard deviation of split frequencies: 0.023323
556000 -- [-1888.514] (-1945.813) (-2047.963) (-1905.214) * (-1929.588) [-1888.176] (-2075.639) (-1917.506) -- 0:20:02
557000 -- [-1889.042] (-1927.932) (-2033.711) (-1935.443) * (-1924.237) [-1889.791] (-2066.386) (-1909.524) -- 0:20:00
558000 -- [-1892.256] (-1931.504) (-2060.553) (-1917.110) * (-1911.817) [-1892.421] (-2082.064) (-1923.402) -- 0:19:56
559000 -- [-1882.194] (-1909.225) (-2040.098) (-1940.732) * (-1921.347) [-1899.086] (-2087.865) (-1905.572) -- 0:19:54
560000 -- [-1883.849] (-1914.487) (-2039.261) (-1952.856) * (-1915.643) [-1894.949] (-2067.656) (-1913.233) -- 0:19:51
Average standard deviation of split frequencies: 0.023392
561000 -- [-1888.424] (-1923.172) (-2043.282) (-1917.499) * (-1898.116) [-1904.748] (-2061.878) (-1938.233) -- 0:19:47
562000 -- [-1895.720] (-1914.780) (-2051.991) (-1926.398) * (-1901.215) [-1887.421] (-2077.517) (-1940.645) -- 0:19:45
563000 -- [-1886.557] (-1911.146) (-2050.904) (-1903.452) * (-1910.919) [-1890.777] (-2087.935) (-1908.896) -- 0:19:42
564000 -- [-1896.942] (-1924.735) (-2055.624) (-1901.887) * (-1920.740) [-1875.138] (-2085.953) (-1925.975) -- 0:19:38
565000 -- (-1905.848) (-1931.637) (-2062.615) [-1914.993] * (-1933.599) [-1872.593] (-2079.172) (-1928.696) -- 0:19:36
Average standard deviation of split frequencies: 0.022911
566000 -- [-1889.224] (-1935.495) (-2061.002) (-1894.346) * (-1934.286) [-1882.326] (-2081.028) (-1912.551) -- 0:19:33
567000 -- (-1904.613) (-1929.015) (-2066.566) [-1898.465] * (-1928.920) [-1887.463] (-2075.632) (-1919.448) -- 0:19:30
568000 -- [-1889.929] (-1941.547) (-2067.839) (-1918.331) * (-1938.099) [-1896.894] (-2083.975) (-1928.329) -- 0:19:27
569000 -- [-1883.175] (-1920.762) (-2063.393) (-1909.533) * (-1933.469) [-1890.421] (-2074.683) (-1947.795) -- 0:19:24
570000 -- [-1887.984] (-1919.369) (-2042.669) (-1928.592) * (-1922.132) [-1895.151] (-2069.483) (-1937.512) -- 0:19:21
Average standard deviation of split frequencies: 0.022362
571000 -- [-1885.640] (-1907.894) (-2046.340) (-1905.508) * (-1934.692) [-1896.321] (-2088.888) (-1939.992) -- 0:19:18
572000 -- [-1896.459] (-1926.830) (-2041.046) (-1886.317) * (-1925.826) [-1912.757] (-2075.709) (-1920.445) -- 0:19:16
573000 -- [-1876.816] (-1933.692) (-2048.011) (-1895.962) * (-1922.590) [-1904.176] (-2077.414) (-1923.979) -- 0:19:12
574000 -- [-1896.310] (-1918.351) (-2050.892) (-1908.411) * (-1923.705) [-1913.518] (-2088.539) (-1932.996) -- 0:19:10
575000 -- [-1896.893] (-1905.317) (-2059.049) (-1893.960) * (-1934.957) (-1911.659) (-2077.480) [-1930.235] -- 0:19:07
Average standard deviation of split frequencies: 0.021925
576000 -- (-1911.289) (-1938.063) (-2058.742) [-1892.781] * (-1933.471) (-1901.193) (-2076.509) [-1903.504] -- 0:19:03
577000 -- (-1926.306) (-1934.210) (-2069.090) [-1894.524] * (-1937.447) [-1894.671] (-2086.660) (-1912.853) -- 0:19:01
578000 -- (-1927.358) (-1937.461) (-2070.449) [-1897.164] * (-1930.558) [-1897.433] (-2073.055) (-1917.202) -- 0:18:58
579000 -- (-1922.528) (-1934.280) (-2061.455) [-1911.243] * (-1920.960) [-1889.956] (-2087.473) (-1923.506) -- 0:18:55
580000 -- (-1916.964) (-1931.716) (-2050.165) [-1896.637] * [-1913.091] (-1896.197) (-2078.272) (-1920.459) -- 0:18:52
Average standard deviation of split frequencies: 0.022746
581000 -- (-1934.522) (-1919.059) (-2044.456) [-1911.510] * (-1908.867) [-1896.998] (-2071.441) (-1912.400) -- 0:18:49
582000 -- (-1916.705) (-1915.057) (-2042.033) [-1906.672] * (-1917.217) [-1878.568] (-2070.073) (-1910.025) -- 0:18:46
583000 -- (-1908.419) (-1915.378) (-2041.465) [-1900.628] * (-1918.305) [-1884.441] (-2056.085) (-1904.145) -- 0:18:43
584000 -- (-1937.187) (-1915.876) (-2039.998) [-1915.038] * (-1917.499) [-1889.831] (-2066.303) (-1914.292) -- 0:18:40
585000 -- (-1941.988) [-1913.779] (-2048.066) (-1926.785) * (-1905.804) [-1891.166] (-2067.462) (-1919.535) -- 0:18:38
Average standard deviation of split frequencies: 0.022510
586000 -- (-1948.421) [-1901.017] (-2058.808) (-1919.124) * (-1909.114) [-1888.332] (-2075.993) (-1943.504) -- 0:18:34
587000 -- (-1922.339) [-1909.012] (-2045.883) (-1898.326) * (-1923.636) [-1882.735] (-2053.072) (-1924.336) -- 0:18:32
588000 -- (-1923.527) (-1904.589) (-2042.575) [-1895.601] * (-1913.055) [-1886.699] (-2050.676) (-1929.628) -- 0:18:29
589000 -- (-1934.868) (-1903.977) (-2049.403) [-1887.055] * (-1906.408) [-1879.744] (-2056.769) (-1926.706) -- 0:18:26
590000 -- (-1929.050) [-1905.190] (-2052.710) (-1905.402) * (-1917.175) [-1878.802] (-2048.839) (-1918.726) -- 0:18:23
Average standard deviation of split frequencies: 0.022917
591000 -- (-1926.812) (-1903.250) (-2052.547) [-1910.584] * (-1916.657) [-1888.043] (-2059.328) (-1910.689) -- 0:18:20
592000 -- (-1898.672) [-1900.623] (-2051.066) (-1928.415) * (-1931.884) [-1884.421] (-2055.999) (-1894.198) -- 0:18:17
593000 -- [-1901.591] (-1933.780) (-2055.872) (-1920.845) * (-1914.815) [-1886.061] (-2061.336) (-1917.827) -- 0:18:14
594000 -- (-1905.618) (-1921.948) (-2046.737) [-1919.677] * (-1926.122) [-1893.467] (-2057.497) (-1911.150) -- 0:18:12
595000 -- [-1905.603] (-1918.571) (-2050.956) (-1926.971) * (-1920.007) (-1901.561) (-2089.602) [-1903.472] -- 0:18:09
Average standard deviation of split frequencies: 0.023347
596000 -- [-1910.160] (-1928.755) (-2053.519) (-1921.681) * (-1928.910) [-1886.976] (-2085.130) (-1901.882) -- 0:18:06
597000 -- [-1885.449] (-1907.114) (-2064.555) (-1958.582) * (-1927.974) [-1891.561] (-2076.430) (-1897.135) -- 0:18:03
598000 -- [-1897.692] (-1903.387) (-2052.421) (-1946.386) * (-1924.408) [-1892.015] (-2075.928) (-1911.080) -- 0:18:00
599000 -- [-1895.077] (-1911.180) (-2070.175) (-1951.834) * (-1935.608) [-1914.046] (-2073.251) (-1920.170) -- 0:17:57
600000 -- [-1880.503] (-1916.053) (-2065.936) (-1936.329) * (-1935.903) [-1894.567] (-2074.879) (-1911.047) -- 0:17:54
Average standard deviation of split frequencies: 0.023110
601000 -- [-1895.167] (-1931.100) (-2071.856) (-1925.634) * (-1924.592) [-1896.509] (-2060.130) (-1898.407) -- 0:17:52
602000 -- [-1889.553] (-1948.776) (-2065.603) (-1933.164) * (-1926.657) [-1895.949] (-2060.465) (-1906.810) -- 0:17:49
603000 -- [-1898.164] (-1937.462) (-2057.927) (-1927.348) * (-1924.590) (-1896.546) (-2065.289) [-1903.102] -- 0:17:46
604000 -- [-1899.407] (-1924.641) (-2061.033) (-1955.729) * (-1905.636) (-1894.138) (-2084.724) [-1886.591] -- 0:17:44
605000 -- [-1884.624] (-1936.892) (-2055.537) (-1947.391) * (-1926.316) (-1904.440) (-2060.770) [-1895.224] -- 0:17:40
Average standard deviation of split frequencies: 0.022948
606000 -- [-1886.181] (-1924.288) (-2077.244) (-1930.579) * (-1931.425) (-1900.089) (-2060.000) [-1896.695] -- 0:17:38
607000 -- [-1894.583] (-1909.182) (-2046.513) (-1944.510) * [-1897.832] (-1900.049) (-2060.551) (-1914.364) -- 0:17:35
608000 -- [-1885.892] (-1931.297) (-2043.843) (-1920.447) * (-1929.443) [-1892.908] (-2069.298) (-1917.356) -- 0:17:32
609000 -- [-1891.217] (-1904.011) (-2064.384) (-1918.147) * (-1920.822) [-1901.166] (-2063.968) (-1926.841) -- 0:17:29
610000 -- [-1879.468] (-1914.231) (-2063.020) (-1918.335) * (-1901.257) [-1899.216] (-2068.503) (-1924.719) -- 0:17:27
Average standard deviation of split frequencies: 0.022166
611000 -- [-1886.475] (-1943.975) (-2051.690) (-1894.288) * (-1924.153) [-1918.051] (-2061.468) (-1889.508) -- 0:17:24
612000 -- [-1899.241] (-1933.791) (-2043.036) (-1884.554) * (-1915.873) (-1929.827) (-2086.025) [-1893.223] -- 0:17:21
613000 -- [-1889.733] (-1935.246) (-2040.738) (-1895.356) * (-1911.108) (-1921.059) (-2065.943) [-1893.693] -- 0:17:18
614000 -- [-1896.266] (-1940.000) (-2059.598) (-1906.145) * (-1917.409) (-1941.649) (-2066.888) [-1897.475] -- 0:17:15
615000 -- [-1892.893] (-1930.610) (-2045.828) (-1907.078) * (-1927.688) [-1920.375] (-2068.127) (-1892.816) -- 0:17:12
Average standard deviation of split frequencies: 0.022471
616000 -- [-1879.265] (-1925.542) (-2049.911) (-1925.780) * (-1916.687) (-1920.182) (-2059.284) [-1883.735] -- 0:17:09
617000 -- [-1890.047] (-1915.949) (-2047.770) (-1940.239) * (-1907.943) (-1925.675) (-2077.291) [-1891.370] -- 0:17:06
618000 -- [-1898.132] (-1915.552) (-2052.178) (-1923.622) * (-1918.283) (-1943.263) (-2055.302) [-1892.584] -- 0:17:04
619000 -- [-1895.840] (-1935.161) (-2061.584) (-1924.264) * (-1914.840) (-1942.503) (-2060.682) [-1890.382] -- 0:17:01
620000 -- [-1893.055] (-1913.092) (-2055.662) (-1939.197) * (-1923.741) (-1952.590) (-2054.829) [-1897.814] -- 0:16:58
Average standard deviation of split frequencies: 0.022633
621000 -- [-1886.350] (-1917.836) (-2046.535) (-1926.253) * (-1921.793) (-1955.176) (-2062.637) [-1891.493] -- 0:16:55
622000 -- [-1894.167] (-1902.331) (-2054.275) (-1924.763) * (-1919.561) (-1927.880) (-2069.854) [-1883.501] -- 0:16:52
623000 -- [-1885.835] (-1903.328) (-2039.121) (-1917.075) * (-1920.951) (-1913.447) (-2067.291) [-1884.711] -- 0:16:49
624000 -- [-1894.362] (-1904.014) (-2036.326) (-1916.511) * (-1933.587) (-1902.385) (-2070.183) [-1888.220] -- 0:16:46
625000 -- [-1885.625] (-1927.058) (-2036.309) (-1921.826) * (-1918.696) (-1904.426) (-2070.067) [-1895.296] -- 0:16:43
Average standard deviation of split frequencies: 0.023048
626000 -- [-1879.481] (-1909.936) (-2056.521) (-1930.814) * (-1915.473) (-1924.731) (-2072.754) [-1893.282] -- 0:16:41
627000 -- [-1893.417] (-1910.713) (-2059.799) (-1909.246) * (-1915.731) (-1902.514) (-2060.892) [-1892.706] -- 0:16:38
628000 -- [-1906.008] (-1896.608) (-2054.567) (-1915.147) * (-1944.466) [-1907.330] (-2054.644) (-1898.107) -- 0:16:35
629000 -- (-1910.680) (-1899.317) (-2064.873) [-1890.096] * (-1907.658) (-1912.288) (-2063.256) [-1883.919] -- 0:16:32
630000 -- (-1911.704) (-1909.988) (-2060.016) [-1899.421] * (-1909.226) [-1889.938] (-2063.659) (-1890.756) -- 0:16:29
Average standard deviation of split frequencies: 0.023132
631000 -- (-1908.438) (-1921.071) (-2051.084) [-1900.437] * [-1894.731] (-1903.426) (-2068.803) (-1916.751) -- 0:16:27
632000 -- [-1893.627] (-1955.428) (-2044.136) (-1906.280) * [-1916.600] (-1888.449) (-2077.191) (-1933.974) -- 0:16:24
633000 -- (-1908.434) (-1922.850) (-2045.884) [-1895.476] * [-1910.436] (-1900.186) (-2069.252) (-1935.769) -- 0:16:21
634000 -- (-1903.003) (-1914.709) (-2042.265) [-1892.771] * (-1918.797) [-1890.914] (-2063.826) (-1939.065) -- 0:16:18
635000 -- (-1903.126) (-1924.583) (-2031.404) [-1900.231] * (-1912.272) [-1898.987] (-2070.553) (-1925.387) -- 0:16:16
Average standard deviation of split frequencies: 0.023705
636000 -- (-1914.099) (-1919.698) (-2031.959) [-1907.075] * (-1904.742) [-1905.265] (-2065.112) (-1935.770) -- 0:16:12
637000 -- (-1916.537) (-1916.900) (-2043.539) [-1908.136] * [-1887.472] (-1902.460) (-2070.991) (-1951.467) -- 0:16:10
638000 -- (-1912.135) (-1903.154) (-2044.873) [-1907.805] * (-1894.164) [-1898.738] (-2051.255) (-1937.906) -- 0:16:07
639000 -- (-1927.978) [-1900.503] (-2043.003) (-1918.351) * (-1903.028) [-1885.358] (-2046.396) (-1937.454) -- 0:16:04
640000 -- (-1920.671) [-1895.375] (-2051.638) (-1914.041) * (-1940.776) [-1893.953] (-2062.126) (-1915.731) -- 0:16:01
Average standard deviation of split frequencies: 0.023679
641000 -- (-1935.724) [-1900.876] (-2063.929) (-1904.938) * (-1908.509) [-1897.612] (-2071.842) (-1937.669) -- 0:15:58
642000 -- (-1908.995) [-1897.824] (-2053.296) (-1918.172) * (-1906.926) [-1893.973] (-2062.765) (-1942.975) -- 0:15:56
643000 -- (-1953.911) [-1898.323] (-2053.277) (-1934.395) * (-1919.247) [-1893.525] (-2056.653) (-1929.035) -- 0:15:53
644000 -- (-1919.940) [-1883.923] (-2072.021) (-1925.033) * (-1907.918) [-1886.728] (-2061.163) (-1920.049) -- 0:15:50
645000 -- (-1927.643) [-1887.583] (-2061.112) (-1917.931) * (-1919.866) [-1896.940] (-2070.513) (-1929.196) -- 0:15:47
Average standard deviation of split frequencies: 0.023298
646000 -- [-1908.986] (-1906.379) (-2063.608) (-1921.443) * (-1913.603) [-1908.411] (-2078.388) (-1922.690) -- 0:15:44
647000 -- (-1922.022) [-1900.635] (-2071.964) (-1926.119) * [-1904.144] (-1916.961) (-2072.105) (-1927.604) -- 0:15:41
648000 -- (-1917.235) [-1892.142] (-2070.950) (-1925.417) * [-1898.321] (-1923.663) (-2085.203) (-1924.322) -- 0:15:39
649000 -- (-1924.625) [-1905.676] (-2066.949) (-1918.626) * [-1891.762] (-1903.829) (-2071.591) (-1926.301) -- 0:15:36
650000 -- (-1933.306) [-1912.142] (-2082.044) (-1925.165) * [-1892.840] (-1886.460) (-2070.216) (-1924.564) -- 0:15:33
Average standard deviation of split frequencies: 0.023039
651000 -- (-1912.961) [-1895.755] (-2054.480) (-1933.891) * (-1902.176) [-1886.492] (-2066.275) (-1927.618) -- 0:15:30
652000 -- [-1911.413] (-1898.014) (-2045.942) (-1948.172) * [-1885.555] (-1885.073) (-2079.067) (-1931.727) -- 0:15:27
653000 -- [-1903.639] (-1897.408) (-2044.204) (-1937.345) * (-1893.394) [-1884.982] (-2074.085) (-1928.042) -- 0:15:25
654000 -- [-1901.778] (-1909.719) (-2051.317) (-1933.409) * [-1900.157] (-1901.960) (-2075.420) (-1929.319) -- 0:15:22
655000 -- [-1899.260] (-1927.123) (-2052.874) (-1923.871) * (-1907.486) [-1890.456] (-2050.032) (-1907.261) -- 0:15:19
Average standard deviation of split frequencies: 0.022777
656000 -- [-1892.486] (-1932.587) (-2050.786) (-1933.204) * (-1904.350) [-1889.405] (-2058.002) (-1910.169) -- 0:15:16
657000 -- [-1900.578] (-1937.617) (-2049.483) (-1939.542) * (-1909.177) [-1906.743] (-2062.673) (-1912.578) -- 0:15:14
658000 -- [-1907.640] (-1931.349) (-2057.563) (-1930.513) * (-1931.925) (-1913.909) (-2074.793) [-1891.963] -- 0:15:11
659000 -- [-1900.787] (-1929.255) (-2065.642) (-1933.952) * (-1917.081) (-1907.833) (-2077.208) [-1889.849] -- 0:15:08
660000 -- [-1894.971] (-1936.420) (-2051.293) (-1923.432) * (-1929.460) (-1892.565) (-2069.252) [-1894.856] -- 0:15:05
Average standard deviation of split frequencies: 0.022924
661000 -- (-1897.838) (-1940.626) (-2042.804) [-1914.607] * (-1933.012) [-1893.053] (-2065.783) (-1892.872) -- 0:15:03
662000 -- [-1898.756] (-1930.648) (-2051.592) (-1913.667) * (-1944.018) [-1897.232] (-2077.747) (-1902.892) -- 0:15:00
663000 -- (-1909.042) (-1916.091) (-2049.947) [-1902.163] * (-1929.998) (-1892.849) (-2070.100) [-1914.249] -- 0:14:57
664000 -- [-1896.118] (-1928.031) (-2038.547) (-1914.791) * (-1935.769) (-1893.464) (-2076.781) [-1902.519] -- 0:14:54
665000 -- [-1890.925] (-1918.012) (-2051.453) (-1919.836) * (-1935.605) (-1893.938) (-2054.001) [-1901.346] -- 0:14:51
Average standard deviation of split frequencies: 0.023075
666000 -- [-1910.077] (-1924.651) (-2061.178) (-1917.654) * (-1947.297) (-1912.947) (-2050.160) [-1892.519] -- 0:14:49
667000 -- [-1897.754] (-1905.328) (-2046.017) (-1930.374) * (-1948.328) (-1911.684) (-2053.582) [-1889.881] -- 0:14:46
668000 -- [-1895.058] (-1904.096) (-2049.675) (-1920.940) * (-1950.681) (-1898.743) (-2080.611) [-1878.108] -- 0:14:43
669000 -- (-1899.998) (-1930.221) (-2050.060) [-1909.877] * (-1956.613) (-1901.572) (-2070.202) [-1900.755] -- 0:14:40
670000 -- [-1903.262] (-1907.308) (-2046.589) (-1917.312) * (-1966.457) (-1908.454) (-2072.865) [-1901.668] -- 0:14:38
Average standard deviation of split frequencies: 0.023425
671000 -- [-1895.065] (-1913.702) (-2046.063) (-1925.957) * (-1950.426) [-1891.553] (-2068.451) (-1907.227) -- 0:14:35
672000 -- [-1896.709] (-1920.660) (-2046.126) (-1937.722) * (-1950.759) [-1888.721] (-2081.466) (-1907.222) -- 0:14:32
673000 -- [-1894.100] (-1915.085) (-2046.136) (-1939.586) * (-1930.830) [-1890.085] (-2084.837) (-1912.451) -- 0:14:29
674000 -- [-1885.154] (-1920.780) (-2061.599) (-1954.572) * (-1927.406) [-1892.564] (-2082.273) (-1921.559) -- 0:14:26
675000 -- [-1891.710] (-1927.217) (-2052.890) (-1947.089) * (-1913.193) [-1890.397] (-2078.441) (-1913.816) -- 0:14:23
Average standard deviation of split frequencies: 0.023355
676000 -- [-1883.964] (-1926.925) (-2040.029) (-1961.603) * (-1927.667) (-1894.397) (-2083.808) [-1911.053] -- 0:14:21
677000 -- [-1906.622] (-1921.022) (-2049.416) (-1945.022) * (-1927.792) [-1896.868] (-2086.402) (-1908.080) -- 0:14:18
678000 -- [-1898.061] (-1917.620) (-2060.515) (-1934.376) * (-1913.068) [-1904.270] (-2084.027) (-1919.898) -- 0:14:16
679000 -- [-1906.019] (-1915.643) (-2041.968) (-1937.605) * (-1909.089) [-1903.209] (-2092.747) (-1915.186) -- 0:14:14
680000 -- [-1910.210] (-1916.528) (-2049.943) (-1928.601) * (-1917.730) [-1896.392] (-2096.427) (-1940.973) -- 0:14:11
Average standard deviation of split frequencies: 0.023711
681000 -- [-1901.758] (-1913.159) (-2059.597) (-1946.599) * (-1920.351) [-1886.592] (-2086.482) (-1934.939) -- 0:14:08
682000 -- (-1924.044) [-1903.463] (-2050.265) (-1946.780) * (-1929.703) [-1890.662] (-2086.553) (-1932.540) -- 0:14:06
683000 -- (-1937.251) [-1905.489] (-2072.895) (-1921.335) * (-1928.696) [-1883.994] (-2080.946) (-1920.176) -- 0:14:04
684000 -- [-1901.272] (-1915.994) (-2058.436) (-1941.163) * (-1916.796) [-1892.041] (-2078.536) (-1924.962) -- 0:14:01
685000 -- (-1915.657) [-1916.322] (-2073.573) (-1924.238) * (-1907.884) [-1897.463] (-2086.251) (-1969.924) -- 0:13:59
Average standard deviation of split frequencies: 0.023889
686000 -- [-1896.753] (-1930.990) (-2058.368) (-1935.490) * (-1929.111) [-1896.011] (-2084.257) (-1943.216) -- 0:13:57
687000 -- [-1916.905] (-1937.226) (-2046.821) (-1938.586) * [-1915.206] (-1906.117) (-2091.315) (-1929.907) -- 0:13:55
688000 -- [-1911.593] (-1928.979) (-2049.516) (-1930.794) * (-1922.331) [-1896.326] (-2080.533) (-1931.185) -- 0:13:53
689000 -- [-1919.697] (-1948.820) (-2039.721) (-1925.649) * (-1905.299) [-1892.423] (-2071.138) (-1951.256) -- 0:13:50
690000 -- [-1915.103] (-1936.760) (-2047.281) (-1912.308) * (-1907.790) [-1893.901] (-2080.816) (-1941.066) -- 0:13:48
Average standard deviation of split frequencies: 0.024087
691000 -- [-1908.264] (-1937.222) (-2038.138) (-1922.143) * (-1922.141) [-1891.679] (-2074.903) (-1957.258) -- 0:13:45
692000 -- [-1893.468] (-1922.889) (-2039.569) (-1925.276) * (-1926.550) [-1889.608] (-2073.619) (-1926.584) -- 0:13:43
693000 -- [-1888.340] (-1921.333) (-2027.266) (-1921.103) * (-1924.082) [-1892.106] (-2080.279) (-1910.297) -- 0:13:41
694000 -- [-1894.115] (-1923.547) (-2033.647) (-1909.826) * (-1946.009) [-1908.868] (-2072.660) (-1913.913) -- 0:13:38
695000 -- [-1892.442] (-1946.596) (-2042.208) (-1919.684) * (-1944.999) (-1898.029) (-2087.345) [-1900.136] -- 0:13:36
Average standard deviation of split frequencies: 0.024408
696000 -- [-1900.116] (-1945.475) (-2051.823) (-1936.326) * (-1932.075) [-1898.247] (-2062.659) (-1906.819) -- 0:13:34
697000 -- [-1883.736] (-1944.960) (-2043.493) (-1912.072) * (-1923.819) [-1895.857] (-2054.817) (-1908.358) -- 0:13:32
698000 -- [-1884.906] (-1930.915) (-2038.642) (-1941.579) * (-1928.694) [-1898.831] (-2075.894) (-1917.033) -- 0:13:29
699000 -- [-1894.863] (-1947.700) (-2052.683) (-1918.861) * (-1918.193) (-1911.252) (-2053.577) [-1893.313] -- 0:13:27
700000 -- [-1894.482] (-1939.382) (-2048.654) (-1943.473) * (-1939.855) (-1905.787) (-2060.475) [-1910.351] -- 0:13:25
Average standard deviation of split frequencies: 0.024551
701000 -- (-1915.254) (-1937.923) (-2063.951) [-1928.404] * (-1934.913) (-1912.312) (-2076.394) [-1903.703] -- 0:13:22
702000 -- [-1910.861] (-1933.397) (-2052.273) (-1920.617) * (-1944.469) [-1910.697] (-2070.209) (-1904.232) -- 0:13:20
703000 -- [-1913.663] (-1908.965) (-2054.869) (-1937.018) * (-1944.392) [-1924.148] (-2048.804) (-1905.739) -- 0:13:17
704000 -- [-1906.096] (-1935.705) (-2054.883) (-1937.513) * (-1948.634) (-1917.224) (-2069.454) [-1886.270] -- 0:13:14
705000 -- [-1900.575] (-1953.614) (-2043.814) (-1926.204) * (-1948.190) (-1909.062) (-2078.289) [-1891.899] -- 0:13:11
Average standard deviation of split frequencies: 0.024378
706000 -- [-1875.449] (-1948.248) (-2051.558) (-1933.319) * (-1937.237) (-1905.331) (-2086.132) [-1884.055] -- 0:13:08
707000 -- [-1882.091] (-1933.745) (-2068.750) (-1938.402) * (-1937.132) (-1914.213) (-2080.180) [-1874.909] -- 0:13:06
708000 -- [-1887.261] (-1952.551) (-2056.030) (-1939.920) * (-1931.450) (-1919.943) (-2077.350) [-1885.053] -- 0:13:03
709000 -- [-1891.263] (-1935.382) (-2053.629) (-1946.841) * (-1950.592) (-1900.071) (-2075.978) [-1885.493] -- 0:13:00
710000 -- [-1896.174] (-1931.756) (-2080.437) (-1931.637) * (-1942.828) (-1899.582) (-2078.604) [-1885.483] -- 0:12:57
Average standard deviation of split frequencies: 0.024230
711000 -- [-1887.257] (-1928.485) (-2070.210) (-1926.144) * (-1936.065) [-1897.063] (-2087.563) (-1888.691) -- 0:12:55
712000 -- [-1890.171] (-1916.045) (-2055.354) (-1932.324) * (-1940.250) (-1912.406) (-2063.030) [-1877.392] -- 0:12:52
713000 -- [-1889.813] (-1926.314) (-2045.764) (-1926.654) * (-1941.663) (-1899.639) (-2072.304) [-1886.213] -- 0:12:49
714000 -- [-1888.457] (-1921.349) (-2068.880) (-1911.553) * (-1941.632) (-1913.132) (-2073.879) [-1882.738] -- 0:12:46
715000 -- [-1890.709] (-1944.113) (-2064.203) (-1915.192) * (-1939.655) (-1922.111) (-2055.952) [-1881.919] -- 0:12:43
Average standard deviation of split frequencies: 0.023439
716000 -- [-1899.049] (-1943.230) (-2066.041) (-1914.842) * (-1937.820) (-1914.491) (-2083.256) [-1880.512] -- 0:12:41
717000 -- [-1896.903] (-1937.630) (-2072.069) (-1926.176) * (-1928.626) (-1918.504) (-2090.091) [-1874.253] -- 0:12:38
718000 -- [-1904.353] (-1940.054) (-2077.344) (-1925.819) * (-1935.103) (-1918.034) (-2080.281) [-1886.206] -- 0:12:35
719000 -- (-1920.073) [-1917.284] (-2057.190) (-1909.946) * (-1911.984) (-1910.787) (-2066.760) [-1889.449] -- 0:12:32
720000 -- [-1891.097] (-1919.821) (-2067.155) (-1925.952) * (-1940.701) (-1897.613) (-2071.695) [-1894.659] -- 0:12:29
Average standard deviation of split frequencies: 0.023358
721000 -- [-1875.669] (-1936.507) (-2069.534) (-1917.528) * (-1937.144) (-1894.420) (-2067.666) [-1902.171] -- 0:12:27
722000 -- [-1876.221] (-1940.712) (-2058.143) (-1917.472) * (-1947.207) (-1898.821) (-2061.032) [-1892.515] -- 0:12:24
723000 -- [-1882.840] (-1958.991) (-2053.690) (-1913.168) * (-1923.826) (-1914.709) (-2082.072) [-1899.014] -- 0:12:21
724000 -- [-1892.682] (-1921.520) (-2065.450) (-1924.093) * (-1926.773) (-1914.336) (-2076.396) [-1903.669] -- 0:12:18
725000 -- [-1904.400] (-1902.929) (-2066.197) (-1938.252) * (-1921.329) [-1909.412] (-2067.320) (-1911.218) -- 0:12:16
Average standard deviation of split frequencies: 0.023033
726000 -- [-1881.594] (-1913.196) (-2071.155) (-1911.204) * (-1936.021) [-1904.225] (-2070.929) (-1900.627) -- 0:12:13
727000 -- [-1880.735] (-1919.175) (-2066.132) (-1909.404) * (-1926.137) [-1892.029] (-2093.007) (-1909.641) -- 0:12:10
728000 -- (-1891.123) (-1916.820) (-2068.190) [-1903.955] * (-1941.903) [-1885.434] (-2065.715) (-1911.229) -- 0:12:07
729000 -- (-1899.020) (-1922.220) (-2058.728) [-1911.195] * (-1928.412) (-1906.692) (-2089.214) [-1916.866] -- 0:12:04
730000 -- (-1910.115) (-1919.663) (-2048.083) [-1908.409] * (-1945.077) [-1908.441] (-2075.621) (-1914.958) -- 0:12:01
Average standard deviation of split frequencies: 0.023015
731000 -- [-1893.080] (-1930.162) (-2033.631) (-1910.293) * (-1943.932) (-1907.150) (-2076.904) [-1901.244] -- 0:11:59
732000 -- [-1902.879] (-1925.643) (-2050.265) (-1916.754) * (-1930.069) (-1911.759) (-2077.826) [-1902.415] -- 0:11:56
733000 -- [-1883.028] (-1933.150) (-2065.607) (-1899.777) * (-1942.079) (-1896.951) (-2062.130) [-1888.163] -- 0:11:53
734000 -- [-1888.763] (-1936.245) (-2061.618) (-1911.919) * (-1940.266) (-1899.267) (-2066.401) [-1889.043] -- 0:11:51
735000 -- [-1889.348] (-1940.947) (-2057.201) (-1918.546) * (-1923.678) (-1916.610) (-2078.944) [-1890.819] -- 0:11:48
Average standard deviation of split frequencies: 0.022487
736000 -- [-1885.060] (-1926.777) (-2051.931) (-1914.476) * (-1926.462) (-1896.849) (-2072.233) [-1889.431] -- 0:11:45
737000 -- [-1888.532] (-1940.203) (-2048.824) (-1925.600) * (-1943.579) (-1891.394) (-2066.020) [-1889.372] -- 0:11:42
738000 -- [-1892.462] (-1932.215) (-2059.813) (-1932.298) * (-1921.268) [-1892.459] (-2077.683) (-1901.468) -- 0:11:40
739000 -- [-1886.732] (-1924.619) (-2069.290) (-1908.710) * (-1922.436) (-1896.626) (-2072.257) [-1910.690] -- 0:11:37
740000 -- [-1899.996] (-1923.733) (-2059.195) (-1898.895) * (-1922.466) [-1884.573] (-2053.795) (-1923.537) -- 0:11:34
Average standard deviation of split frequencies: 0.022218
741000 -- [-1886.151] (-1914.029) (-2062.710) (-1908.743) * (-1922.074) [-1890.125] (-2054.108) (-1921.569) -- 0:11:32
742000 -- [-1895.214] (-1933.861) (-2048.621) (-1917.578) * (-1941.672) [-1894.021] (-2053.165) (-1922.000) -- 0:11:29
743000 -- [-1892.424] (-1926.276) (-2054.542) (-1923.532) * (-1945.626) (-1884.895) (-2057.776) [-1901.565] -- 0:11:26
744000 -- [-1897.818] (-1914.753) (-2056.870) (-1919.672) * (-1942.048) [-1889.901] (-2064.811) (-1904.241) -- 0:11:23
745000 -- [-1882.225] (-1912.672) (-2062.356) (-1905.770) * (-1938.517) [-1898.623] (-2058.267) (-1907.084) -- 0:11:20
Average standard deviation of split frequencies: 0.022243
746000 -- [-1892.690] (-1897.782) (-2055.733) (-1911.521) * (-1934.967) (-1904.083) (-2065.467) [-1899.457] -- 0:11:18
747000 -- [-1899.561] (-1910.853) (-2051.650) (-1901.531) * (-1940.778) [-1902.559] (-2069.766) (-1916.294) -- 0:11:15
748000 -- [-1892.761] (-1900.532) (-2064.275) (-1918.937) * (-1944.900) [-1903.347] (-2055.215) (-1903.790) -- 0:11:12
749000 -- [-1903.673] (-1939.746) (-2067.088) (-1897.274) * (-1944.427) (-1915.236) (-2045.148) [-1904.833] -- 0:11:09
750000 -- [-1911.344] (-1923.992) (-2051.425) (-1901.130) * (-1937.422) [-1915.237] (-2057.968) (-1904.030) -- 0:11:07
Average standard deviation of split frequencies: 0.022345
751000 -- (-1909.416) (-1913.814) (-2045.940) [-1910.244] * (-1955.857) (-1919.017) (-2075.831) [-1911.844] -- 0:11:04
752000 -- (-1911.310) (-1893.423) (-2059.102) [-1907.299] * (-1936.351) [-1902.886] (-2069.342) (-1935.315) -- 0:11:01
753000 -- [-1897.710] (-1903.379) (-2056.202) (-1921.715) * (-1943.064) [-1894.266] (-2051.174) (-1930.900) -- 0:10:58
754000 -- [-1904.853] (-1902.562) (-2056.597) (-1928.086) * (-1959.025) (-1903.136) (-2072.919) [-1921.677] -- 0:10:56
755000 -- [-1898.012] (-1906.098) (-2046.671) (-1923.341) * (-1949.834) (-1910.546) (-2095.664) [-1917.987] -- 0:10:53
Average standard deviation of split frequencies: 0.021960
756000 -- (-1925.622) [-1890.824] (-2033.733) (-1911.681) * (-1946.283) (-1913.713) (-2074.826) [-1917.858] -- 0:10:50
757000 -- (-1915.506) [-1893.113] (-2044.566) (-1920.217) * (-1945.480) [-1903.236] (-2071.107) (-1905.369) -- 0:10:48
758000 -- (-1907.476) (-1900.731) (-2039.853) [-1918.714] * (-1942.687) (-1908.449) (-2067.291) [-1896.612] -- 0:10:45
759000 -- (-1900.203) [-1894.661] (-2050.755) (-1924.374) * (-1932.897) [-1896.000] (-2069.266) (-1900.398) -- 0:10:42
760000 -- (-1917.905) [-1889.926] (-2065.312) (-1930.250) * (-1922.186) [-1892.171] (-2058.480) (-1912.095) -- 0:10:39
Average standard deviation of split frequencies: 0.021713
761000 -- (-1907.250) [-1894.510] (-2051.641) (-1920.752) * (-1914.525) [-1895.739] (-2050.326) (-1917.233) -- 0:10:36
762000 -- (-1891.196) [-1891.805] (-2061.193) (-1924.137) * (-1922.165) [-1885.066] (-2067.067) (-1908.476) -- 0:10:34
763000 -- (-1899.301) [-1903.257] (-2057.752) (-1928.178) * (-1934.927) (-1884.896) (-2077.171) [-1901.887] -- 0:10:31
764000 -- [-1895.005] (-1920.322) (-2052.054) (-1926.437) * (-1942.608) [-1891.851] (-2071.748) (-1914.685) -- 0:10:28
765000 -- [-1898.772] (-1915.231) (-2051.777) (-1928.069) * (-1913.244) [-1895.283] (-2072.597) (-1923.086) -- 0:10:25
Average standard deviation of split frequencies: 0.022298
766000 -- [-1908.116] (-1929.607) (-2047.234) (-1920.770) * (-1905.336) [-1883.382] (-2072.719) (-1917.039) -- 0:10:23
767000 -- [-1910.916] (-1935.973) (-2042.916) (-1904.408) * (-1890.354) (-1905.932) (-2067.383) [-1899.504] -- 0:10:20
768000 -- (-1907.954) (-1943.475) (-2030.989) [-1897.760] * [-1883.176] (-1930.694) (-2062.194) (-1900.463) -- 0:10:17
769000 -- [-1913.563] (-1950.386) (-2038.392) (-1910.213) * [-1884.080] (-1922.290) (-2059.907) (-1920.301) -- 0:10:15
770000 -- [-1901.448] (-1941.411) (-2050.801) (-1919.214) * [-1889.051] (-1939.032) (-2055.764) (-1905.403) -- 0:10:12
Average standard deviation of split frequencies: 0.021835
771000 -- (-1898.642) (-1948.846) (-2049.533) [-1902.569] * (-1910.243) (-1931.537) (-2055.259) [-1905.270] -- 0:10:09
772000 -- [-1897.263] (-1943.940) (-2061.272) (-1908.677) * [-1914.920] (-1938.603) (-2043.542) (-1914.275) -- 0:10:06
773000 -- [-1890.959] (-1953.740) (-2079.763) (-1912.667) * [-1911.050] (-1948.242) (-2064.958) (-1904.878) -- 0:10:04
774000 -- (-1891.702) (-1949.982) (-2058.709) [-1892.306] * [-1912.194] (-1936.379) (-2075.456) (-1899.358) -- 0:10:01
775000 -- [-1898.747] (-1923.282) (-2049.501) (-1893.165) * [-1900.177] (-1944.873) (-2078.186) (-1904.720) -- 0:09:58
Average standard deviation of split frequencies: 0.021425
776000 -- [-1891.720] (-1928.227) (-2048.983) (-1899.322) * [-1909.866] (-1934.489) (-2069.918) (-1911.995) -- 0:09:56
777000 -- [-1887.399] (-1913.992) (-2050.331) (-1923.301) * (-1923.411) (-1928.048) (-2059.373) [-1904.833] -- 0:09:53
778000 -- [-1892.146] (-1901.022) (-2053.207) (-1932.133) * (-1920.472) (-1941.156) (-2060.695) [-1903.770] -- 0:09:50
779000 -- [-1888.568] (-1898.026) (-2042.311) (-1924.311) * [-1887.854] (-1919.466) (-2053.706) (-1905.837) -- 0:09:47
780000 -- [-1887.656] (-1908.044) (-2050.138) (-1934.458) * (-1896.084) (-1925.078) (-2052.769) [-1892.686] -- 0:09:44
Average standard deviation of split frequencies: 0.021361
781000 -- (-1897.484) [-1906.418] (-2055.798) (-1923.659) * [-1895.630] (-1925.151) (-2036.603) (-1891.725) -- 0:09:42
782000 -- [-1897.485] (-1932.728) (-2047.502) (-1925.722) * (-1923.676) (-1904.596) (-2043.885) [-1888.225] -- 0:09:39
783000 -- [-1903.426] (-1935.296) (-2038.709) (-1930.092) * (-1940.215) [-1892.780] (-2062.926) (-1900.341) -- 0:09:37
784000 -- [-1882.362] (-1918.050) (-2048.942) (-1916.445) * (-1940.888) [-1889.986] (-2071.461) (-1899.184) -- 0:09:34
785000 -- [-1879.767] (-1936.211) (-2045.295) (-1922.236) * (-1900.589) (-1884.169) (-2068.636) [-1900.130] -- 0:09:31
Average standard deviation of split frequencies: 0.021184
786000 -- [-1884.006] (-1925.712) (-2057.732) (-1930.351) * (-1908.418) [-1885.967] (-2066.972) (-1919.717) -- 0:09:28
787000 -- [-1894.119] (-1911.604) (-2062.814) (-1928.047) * (-1894.835) [-1885.926] (-2087.238) (-1936.800) -- 0:09:26
788000 -- [-1891.150] (-1900.377) (-2066.190) (-1948.096) * (-1908.451) [-1894.858] (-2077.285) (-1944.232) -- 0:09:23
789000 -- [-1882.314] (-1913.920) (-2058.746) (-1950.035) * [-1908.695] (-1907.713) (-2086.770) (-1931.690) -- 0:09:20
790000 -- [-1905.601] (-1902.907) (-2049.333) (-1942.667) * (-1905.004) [-1907.358] (-2079.464) (-1928.776) -- 0:09:17
Average standard deviation of split frequencies: 0.020942
791000 -- (-1900.328) [-1909.961] (-2052.853) (-1950.304) * (-1923.176) [-1897.654] (-2078.465) (-1926.243) -- 0:09:15
792000 -- (-1893.076) [-1912.820] (-2051.418) (-1940.493) * (-1931.072) (-1899.626) (-2075.578) [-1905.329] -- 0:09:12
793000 -- (-1902.531) [-1918.134] (-2048.009) (-1917.616) * (-1953.296) [-1897.625] (-2079.173) (-1904.506) -- 0:09:09
794000 -- (-1895.354) [-1903.755] (-2050.627) (-1934.417) * [-1917.487] (-1914.653) (-2079.051) (-1903.022) -- 0:09:07
795000 -- [-1889.756] (-1901.374) (-2037.720) (-1940.867) * (-1911.530) [-1890.416] (-2075.471) (-1924.210) -- 0:09:04
Average standard deviation of split frequencies: 0.020558
796000 -- [-1912.933] (-1886.680) (-2035.827) (-1944.317) * (-1918.338) [-1895.712] (-2077.050) (-1939.296) -- 0:09:01
797000 -- [-1898.905] (-1904.544) (-2039.786) (-1929.070) * (-1935.699) [-1893.930] (-2076.888) (-1918.024) -- 0:08:58
798000 -- [-1897.487] (-1919.086) (-2029.693) (-1933.904) * (-1942.666) [-1900.420] (-2082.053) (-1898.182) -- 0:08:56
799000 -- (-1916.795) (-1931.884) (-2031.892) [-1905.590] * (-1940.783) (-1904.914) (-2079.119) [-1896.540] -- 0:08:53
800000 -- [-1908.809] (-1913.773) (-2042.443) (-1907.884) * (-1931.351) [-1907.698] (-2090.394) (-1916.876) -- 0:08:50
Average standard deviation of split frequencies: 0.019860
801000 -- [-1899.695] (-1907.839) (-2045.138) (-1909.635) * (-1930.134) [-1905.632] (-2084.288) (-1912.139) -- 0:08:48
802000 -- [-1909.753] (-1910.350) (-2045.711) (-1923.470) * (-1935.015) [-1904.626] (-2077.585) (-1908.963) -- 0:08:45
803000 -- [-1914.184] (-1907.770) (-2030.331) (-1915.576) * (-1945.569) (-1922.529) (-2089.067) [-1908.750] -- 0:08:42
804000 -- [-1917.585] (-1913.313) (-2034.567) (-1918.050) * [-1916.186] (-1915.835) (-2072.683) (-1909.265) -- 0:08:39
805000 -- (-1914.119) [-1905.983] (-2038.930) (-1933.894) * (-1922.131) [-1911.324] (-2071.362) (-1903.206) -- 0:08:37
Average standard deviation of split frequencies: 0.019959
806000 -- [-1895.791] (-1912.537) (-2059.737) (-1918.468) * (-1937.891) (-1917.052) (-2070.121) [-1891.326] -- 0:08:34
807000 -- [-1903.853] (-1924.478) (-2047.673) (-1925.862) * (-1947.015) (-1921.526) (-2081.986) [-1890.374] -- 0:08:32
808000 -- [-1906.925] (-1921.860) (-2042.233) (-1917.383) * (-1919.297) (-1932.461) (-2087.680) [-1909.345] -- 0:08:29
809000 -- [-1914.992] (-1898.738) (-2063.045) (-1927.966) * (-1934.363) (-1918.420) (-2090.690) [-1911.118] -- 0:08:26
810000 -- [-1917.963] (-1897.184) (-2054.638) (-1932.694) * (-1927.655) (-1923.335) (-2087.429) [-1902.171] -- 0:08:24
Average standard deviation of split frequencies: 0.020197
811000 -- [-1919.575] (-1917.073) (-2059.522) (-1908.487) * (-1929.299) (-1938.705) (-2064.115) [-1887.987] -- 0:08:21
812000 -- [-1918.888] (-1905.930) (-2058.262) (-1929.326) * (-1905.221) (-1951.698) (-2070.278) [-1895.837] -- 0:08:19
813000 -- [-1898.525] (-1897.208) (-2061.281) (-1918.024) * (-1912.702) (-1942.916) (-2086.601) [-1901.602] -- 0:08:17
814000 -- [-1903.533] (-1902.729) (-2058.821) (-1932.687) * (-1909.552) (-1954.741) (-2085.447) [-1898.939] -- 0:08:14
815000 -- [-1912.196] (-1909.544) (-2061.725) (-1927.077) * [-1915.872] (-1946.107) (-2073.903) (-1906.300) -- 0:08:12
Average standard deviation of split frequencies: 0.020261
816000 -- [-1904.649] (-1915.805) (-2059.395) (-1931.632) * (-1925.836) (-1935.564) (-2077.511) [-1885.871] -- 0:08:09
817000 -- (-1910.382) [-1908.515] (-2067.473) (-1935.483) * (-1934.108) (-1920.599) (-2095.154) [-1880.708] -- 0:08:07
818000 -- [-1897.736] (-1922.064) (-2071.688) (-1930.914) * (-1923.736) (-1914.742) (-2088.210) [-1882.796] -- 0:08:04
819000 -- [-1894.428] (-1907.400) (-2066.701) (-1931.808) * [-1907.947] (-1944.798) (-2098.821) (-1882.391) -- 0:08:02
820000 -- [-1899.272] (-1921.149) (-2084.470) (-1919.902) * [-1917.741] (-1938.973) (-2070.360) (-1896.164) -- 0:07:59
Average standard deviation of split frequencies: 0.020258
821000 -- (-1913.166) [-1909.826] (-2078.264) (-1922.316) * [-1889.383] (-1934.452) (-2086.592) (-1891.163) -- 0:07:57
822000 -- (-1902.358) [-1908.238] (-2072.941) (-1930.513) * (-1905.272) (-1940.549) (-2085.661) [-1893.185] -- 0:07:54
823000 -- (-1913.400) [-1903.364] (-2067.775) (-1925.755) * [-1892.617] (-1951.217) (-2061.427) (-1896.264) -- 0:07:51
824000 -- (-1925.005) [-1901.178] (-2052.143) (-1914.719) * (-1916.670) (-1946.858) (-2069.890) [-1894.522] -- 0:07:49
825000 -- (-1926.706) [-1900.468] (-2057.163) (-1899.415) * (-1909.531) (-1932.228) (-2078.769) [-1895.657] -- 0:07:46
Average standard deviation of split frequencies: 0.020433
826000 -- [-1903.119] (-1910.047) (-2050.356) (-1906.175) * [-1906.844] (-1942.558) (-2077.637) (-1892.152) -- 0:07:43
827000 -- (-1916.922) (-1923.948) (-2039.406) [-1892.542] * (-1902.494) (-1919.209) (-2056.049) [-1899.167] -- 0:07:41
828000 -- (-1919.953) (-1909.409) (-2055.237) [-1884.682] * (-1915.687) (-1924.865) (-2064.860) [-1898.106] -- 0:07:38
829000 -- (-1922.108) (-1915.198) (-2060.464) [-1887.678] * (-1902.879) (-1916.885) (-2070.867) [-1885.684] -- 0:07:35
830000 -- (-1940.371) [-1896.981] (-2033.079) (-1905.746) * (-1926.732) (-1909.508) (-2063.129) [-1904.159] -- 0:07:32
Average standard deviation of split frequencies: 0.020288
831000 -- (-1934.162) [-1903.261] (-2030.770) (-1923.543) * (-1914.024) (-1910.119) (-2069.244) [-1886.051] -- 0:07:30
832000 -- (-1916.952) [-1907.542] (-2044.826) (-1917.515) * (-1912.008) (-1910.618) (-2050.025) [-1889.427] -- 0:07:27
833000 -- (-1931.092) (-1908.126) (-2040.012) [-1903.113] * (-1908.059) (-1922.571) (-2063.156) [-1881.043] -- 0:07:24
834000 -- (-1916.252) [-1905.646] (-2041.595) (-1917.020) * [-1905.580] (-1943.759) (-2065.257) (-1898.261) -- 0:07:22
835000 -- (-1930.193) [-1893.570] (-2042.727) (-1916.541) * [-1886.827] (-1926.140) (-2080.799) (-1896.924) -- 0:07:19
Average standard deviation of split frequencies: 0.020008
836000 -- (-1946.048) [-1901.868] (-2054.246) (-1898.941) * [-1880.320] (-1922.752) (-2093.149) (-1898.573) -- 0:07:16
837000 -- (-1941.261) [-1902.939] (-2057.243) (-1914.313) * (-1890.077) (-1918.274) (-2071.814) [-1887.994] -- 0:07:14
838000 -- (-1949.923) [-1905.731] (-2054.671) (-1907.945) * [-1886.288] (-1927.536) (-2076.777) (-1883.767) -- 0:07:11
839000 -- (-1934.808) (-1913.027) (-2053.381) [-1904.970] * [-1887.976] (-1926.876) (-2082.463) (-1889.452) -- 0:07:08
840000 -- (-1948.063) [-1896.606] (-2038.034) (-1920.683) * [-1888.055] (-1925.472) (-2075.631) (-1901.658) -- 0:07:06
Average standard deviation of split frequencies: 0.019606
841000 -- (-1939.609) [-1897.653] (-2054.627) (-1903.933) * [-1894.409] (-1922.237) (-2062.247) (-1915.694) -- 0:07:03
842000 -- (-1932.908) (-1891.111) (-2058.075) [-1903.192] * [-1884.258] (-1920.649) (-2066.912) (-1913.016) -- 0:07:00
843000 -- (-1929.587) [-1908.292] (-2049.721) (-1892.666) * (-1896.913) (-1911.516) (-2063.174) [-1914.082] -- 0:06:58
844000 -- (-1940.322) (-1909.047) (-2046.686) [-1890.083] * [-1896.666] (-1930.200) (-2060.607) (-1918.317) -- 0:06:55
845000 -- (-1917.903) (-1921.124) (-2050.423) [-1884.151] * [-1890.674] (-1937.326) (-2063.164) (-1913.939) -- 0:06:52
Average standard deviation of split frequencies: 0.019592
846000 -- [-1921.983] (-1923.387) (-2037.820) (-1904.148) * (-1898.196) (-1930.288) (-2076.535) [-1902.446] -- 0:06:49
847000 -- (-1902.923) (-1928.913) (-2043.684) [-1900.962] * [-1892.513] (-1935.102) (-2072.279) (-1897.906) -- 0:06:47
848000 -- [-1906.382] (-1932.033) (-2050.375) (-1903.176) * [-1899.555] (-1934.753) (-2076.297) (-1903.463) -- 0:06:44
849000 -- [-1901.246] (-1943.147) (-2075.673) (-1901.431) * [-1887.801] (-1910.554) (-2085.497) (-1901.184) -- 0:06:41
850000 -- [-1895.498] (-1929.119) (-2042.152) (-1917.751) * [-1894.047] (-1940.286) (-2091.031) (-1894.461) -- 0:06:39
Average standard deviation of split frequencies: 0.019099
851000 -- (-1900.833) (-1916.742) (-2054.139) [-1896.044] * (-1904.190) (-1932.467) (-2079.980) [-1910.791] -- 0:06:36
852000 -- (-1907.548) (-1930.387) (-2051.009) [-1914.045] * (-1900.319) (-1924.554) (-2080.158) [-1904.002] -- 0:06:33
853000 -- [-1899.291] (-1916.941) (-2071.420) (-1913.049) * [-1881.321] (-1927.226) (-2080.418) (-1913.612) -- 0:06:31
854000 -- (-1905.697) (-1944.653) (-2046.572) [-1918.619] * [-1881.926] (-1927.031) (-2058.484) (-1897.637) -- 0:06:28
855000 -- (-1912.018) (-1949.574) (-2062.048) [-1915.732] * [-1883.632] (-1928.390) (-2063.836) (-1907.912) -- 0:06:25
Average standard deviation of split frequencies: 0.019039
856000 -- (-1911.346) (-1933.384) (-2049.124) [-1905.570] * [-1888.491] (-1933.487) (-2062.159) (-1912.417) -- 0:06:23
857000 -- [-1902.432] (-1927.141) (-2052.443) (-1908.217) * [-1897.966] (-1922.811) (-2058.062) (-1909.456) -- 0:06:20
858000 -- [-1906.849] (-1940.090) (-2071.241) (-1905.530) * [-1890.849] (-1928.490) (-2065.420) (-1896.607) -- 0:06:17
859000 -- [-1906.861] (-1925.003) (-2046.745) (-1927.713) * [-1889.647] (-1945.251) (-2068.219) (-1902.423) -- 0:06:14
860000 -- [-1907.134] (-1921.622) (-2035.876) (-1906.149) * [-1892.538] (-1919.872) (-2078.163) (-1922.263) -- 0:06:12
Average standard deviation of split frequencies: 0.018799
861000 -- (-1926.024) (-1938.380) (-2045.228) [-1895.531] * [-1889.626] (-1914.898) (-2085.728) (-1920.470) -- 0:06:09
862000 -- (-1895.382) (-1915.672) (-2053.457) [-1891.443] * [-1888.191] (-1908.171) (-2098.648) (-1935.776) -- 0:06:06
863000 -- [-1903.512] (-1930.294) (-2043.558) (-1889.378) * [-1889.440] (-1919.849) (-2090.577) (-1935.939) -- 0:06:04
864000 -- (-1902.661) (-1940.110) (-2045.088) [-1884.063] * [-1883.587] (-1916.299) (-2087.043) (-1946.841) -- 0:06:01
865000 -- (-1892.979) (-1918.713) (-2036.857) [-1897.694] * [-1891.322] (-1915.732) (-2080.921) (-1945.504) -- 0:05:59
Average standard deviation of split frequencies: 0.018761
866000 -- [-1895.821] (-1936.804) (-2036.306) (-1906.993) * [-1884.563] (-1910.128) (-2099.857) (-1947.822) -- 0:05:56
867000 -- [-1900.564] (-1942.687) (-2048.283) (-1903.144) * [-1897.793] (-1896.339) (-2095.154) (-1940.930) -- 0:05:54
868000 -- (-1903.057) (-1952.100) (-2046.606) [-1912.345] * [-1900.048] (-1904.134) (-2116.017) (-1949.430) -- 0:05:51
869000 -- [-1885.372] (-1936.171) (-2064.562) (-1910.791) * [-1881.639] (-1901.945) (-2093.524) (-1929.753) -- 0:05:48
870000 -- [-1895.692] (-1939.799) (-2058.555) (-1914.854) * [-1886.091] (-1912.812) (-2079.768) (-1921.168) -- 0:05:46
Average standard deviation of split frequencies: 0.018747
871000 -- [-1900.287] (-1939.760) (-2032.706) (-1908.170) * [-1899.043] (-1911.378) (-2079.561) (-1926.020) -- 0:05:43
872000 -- (-1898.386) (-1924.210) (-2053.441) [-1911.320] * [-1895.397] (-1923.906) (-2086.282) (-1912.414) -- 0:05:41
873000 -- [-1880.777] (-1938.812) (-2056.868) (-1900.090) * [-1903.413] (-1909.574) (-2097.188) (-1923.369) -- 0:05:38
874000 -- [-1881.239] (-1927.366) (-2054.290) (-1921.620) * [-1894.934] (-1895.828) (-2076.341) (-1939.652) -- 0:05:36
875000 -- [-1881.592] (-1934.188) (-2039.065) (-1914.267) * [-1892.858] (-1911.699) (-2076.158) (-1954.481) -- 0:05:33
Average standard deviation of split frequencies: 0.018969
876000 -- [-1888.174] (-1913.507) (-2046.914) (-1934.047) * [-1889.929] (-1906.162) (-2072.963) (-1927.352) -- 0:05:31
877000 -- [-1872.361] (-1922.405) (-2039.961) (-1917.743) * (-1901.235) [-1898.432] (-2090.818) (-1925.498) -- 0:05:28
878000 -- [-1878.937] (-1904.023) (-2042.356) (-1916.781) * (-1905.916) [-1905.846] (-2065.761) (-1920.964) -- 0:05:26
879000 -- [-1882.599] (-1910.501) (-2049.659) (-1943.832) * [-1904.291] (-1908.500) (-2055.291) (-1917.701) -- 0:05:23
880000 -- [-1890.301] (-1902.029) (-2027.316) (-1919.334) * (-1914.370) [-1899.532] (-2068.998) (-1932.471) -- 0:05:21
Average standard deviation of split frequencies: 0.018840
881000 -- (-1897.493) [-1897.838] (-2041.027) (-1923.061) * (-1925.315) [-1897.618] (-2063.895) (-1925.864) -- 0:05:18
882000 -- (-1900.296) [-1917.897] (-2043.289) (-1915.769) * (-1920.816) [-1899.209] (-2070.050) (-1936.223) -- 0:05:15
883000 -- [-1901.082] (-1916.757) (-2040.151) (-1917.413) * (-1941.887) [-1900.886] (-2088.241) (-1909.389) -- 0:05:13
884000 -- [-1906.784] (-1930.413) (-2060.259) (-1931.127) * (-1934.089) (-1906.197) (-2067.909) [-1911.535] -- 0:05:10
885000 -- [-1905.921] (-1920.479) (-2070.778) (-1944.289) * (-1923.136) (-1916.870) (-2078.703) [-1914.240] -- 0:05:08
Average standard deviation of split frequencies: 0.018480
886000 -- [-1904.568] (-1920.099) (-2058.776) (-1930.145) * [-1909.280] (-1896.451) (-2083.018) (-1947.434) -- 0:05:05
887000 -- [-1898.924] (-1903.921) (-2051.041) (-1918.175) * (-1918.731) [-1906.696] (-2080.273) (-1932.979) -- 0:05:02
888000 -- (-1888.862) [-1905.197] (-2055.875) (-1922.753) * [-1913.095] (-1917.593) (-2081.575) (-1923.999) -- 0:05:00
889000 -- [-1898.449] (-1900.669) (-2056.747) (-1933.189) * (-1914.950) [-1923.596] (-2066.601) (-1936.001) -- 0:04:57
890000 -- [-1897.377] (-1898.395) (-2052.426) (-1911.896) * (-1914.943) [-1912.368] (-2066.516) (-1939.742) -- 0:04:55
Average standard deviation of split frequencies: 0.018392
891000 -- (-1897.518) [-1895.611] (-2053.519) (-1924.578) * [-1897.747] (-1908.292) (-2061.891) (-1935.891) -- 0:04:52
892000 -- (-1893.342) [-1882.698] (-2049.860) (-1937.929) * (-1908.600) [-1911.380] (-2068.050) (-1924.619) -- 0:04:49
893000 -- (-1897.000) [-1894.355] (-2051.611) (-1932.484) * (-1908.943) [-1902.559] (-2066.675) (-1934.738) -- 0:04:47
894000 -- (-1896.223) [-1890.156] (-2041.845) (-1931.619) * (-1913.413) [-1895.724] (-2073.863) (-1926.148) -- 0:04:44
895000 -- (-1911.825) [-1887.813] (-2047.358) (-1915.437) * (-1911.395) [-1900.320] (-2077.773) (-1930.589) -- 0:04:42
Average standard deviation of split frequencies: 0.018273
896000 -- [-1897.046] (-1899.020) (-2047.387) (-1929.829) * (-1916.902) (-1911.599) (-2086.401) [-1927.605] -- 0:04:39
897000 -- [-1894.144] (-1890.616) (-2046.166) (-1922.123) * (-1917.937) [-1904.795] (-2072.111) (-1929.675) -- 0:04:36
898000 -- (-1899.646) [-1887.326] (-2055.425) (-1939.240) * [-1892.934] (-1906.672) (-2071.841) (-1935.373) -- 0:04:34
899000 -- (-1915.113) [-1884.996] (-2046.164) (-1924.276) * [-1906.621] (-1908.397) (-2072.216) (-1921.030) -- 0:04:31
900000 -- (-1914.749) [-1888.455] (-2058.254) (-1917.323) * [-1888.140] (-1930.197) (-2070.019) (-1920.936) -- 0:04:29
Average standard deviation of split frequencies: 0.018085
901000 -- (-1940.413) [-1884.514] (-2058.818) (-1912.717) * [-1889.954] (-1912.391) (-2062.854) (-1919.947) -- 0:04:26
902000 -- (-1927.320) [-1878.582] (-2056.435) (-1910.989) * [-1896.373] (-1913.115) (-2060.780) (-1931.204) -- 0:04:24
903000 -- (-1940.310) [-1882.160] (-2066.975) (-1933.627) * (-1907.181) [-1916.347] (-2063.567) (-1930.248) -- 0:04:21
904000 -- (-1935.184) (-1893.404) (-2063.423) [-1906.218] * [-1906.637] (-1931.304) (-2071.546) (-1906.150) -- 0:04:18
905000 -- (-1923.451) (-1913.114) (-2071.054) [-1894.303] * [-1901.659] (-1928.388) (-2068.752) (-1899.189) -- 0:04:16
Average standard deviation of split frequencies: 0.017691
906000 -- (-1932.666) (-1888.561) (-2049.578) [-1896.573] * [-1897.146] (-1909.742) (-2071.634) (-1922.884) -- 0:04:13
907000 -- (-1928.854) [-1901.989] (-2057.245) (-1896.492) * [-1904.313] (-1906.609) (-2051.795) (-1925.055) -- 0:04:10
908000 -- (-1932.288) (-1924.952) (-2052.172) [-1904.419] * (-1918.126) (-1928.799) (-2066.058) [-1899.790] -- 0:04:08
909000 -- (-1923.337) (-1913.509) (-2055.486) [-1899.688] * (-1900.983) (-1968.625) (-2090.810) [-1897.154] -- 0:04:05
910000 -- (-1937.221) (-1916.983) (-2061.575) [-1891.150] * [-1892.923] (-1936.804) (-2072.977) (-1902.161) -- 0:04:03
Average standard deviation of split frequencies: 0.017637
911000 -- (-1948.021) (-1922.604) (-2062.809) [-1891.048] * [-1890.408] (-1919.366) (-2076.119) (-1915.662) -- 0:04:00
912000 -- (-1964.698) (-1923.884) (-2045.577) [-1906.822] * [-1903.289] (-1925.629) (-2083.520) (-1911.486) -- 0:03:57
913000 -- (-1980.951) [-1909.361] (-2053.795) (-1898.219) * [-1897.266] (-1911.263) (-2078.435) (-1910.845) -- 0:03:54
914000 -- (-1953.574) [-1901.272] (-2038.167) (-1905.582) * [-1906.438] (-1914.464) (-2073.468) (-1927.101) -- 0:03:52
915000 -- (-1930.222) [-1899.134] (-2025.702) (-1897.816) * [-1906.673] (-1901.130) (-2061.751) (-1946.198) -- 0:03:49
Average standard deviation of split frequencies: 0.017240
916000 -- (-1923.148) [-1899.500] (-2034.644) (-1902.409) * [-1901.285] (-1915.323) (-2073.035) (-1927.376) -- 0:03:46
917000 -- (-1926.864) [-1905.117] (-2050.791) (-1909.662) * [-1902.228] (-1935.585) (-2077.570) (-1918.579) -- 0:03:44
918000 -- (-1942.133) (-1921.267) (-2047.311) [-1916.367] * [-1910.238] (-1916.048) (-2062.300) (-1936.695) -- 0:03:41
919000 -- (-1939.175) (-1915.724) (-2060.478) [-1901.978] * (-1926.152) [-1919.627] (-2061.481) (-1914.295) -- 0:03:38
920000 -- (-1921.447) (-1906.259) (-2065.332) [-1918.173] * [-1901.284] (-1921.565) (-2064.600) (-1910.080) -- 0:03:36
Average standard deviation of split frequencies: 0.017107
921000 -- (-1925.655) (-1888.379) (-2053.324) [-1908.776] * [-1888.556] (-1930.207) (-2061.820) (-1913.125) -- 0:03:33
922000 -- [-1919.854] (-1904.210) (-2060.637) (-1908.728) * [-1898.749] (-1930.504) (-2052.850) (-1902.053) -- 0:03:30
923000 -- (-1950.645) [-1901.398] (-2069.195) (-1916.190) * (-1894.825) (-1935.817) (-2069.458) [-1901.774] -- 0:03:27
924000 -- (-1925.200) [-1897.379] (-2054.882) (-1919.656) * (-1913.652) (-1920.699) (-2078.923) [-1905.576] -- 0:03:25
925000 -- (-1924.439) [-1897.020] (-2067.770) (-1913.869) * (-1916.704) (-1947.038) (-2064.576) [-1904.998] -- 0:03:22
Average standard deviation of split frequencies: 0.017318
926000 -- (-1932.032) [-1910.160] (-2071.637) (-1907.577) * (-1913.786) (-1945.354) (-2059.990) [-1904.088] -- 0:03:19
927000 -- (-1926.023) [-1906.252] (-2052.076) (-1914.447) * (-1912.761) (-1962.503) (-2056.296) [-1916.945] -- 0:03:17
928000 -- (-1911.161) [-1898.859] (-2063.581) (-1930.435) * [-1899.881] (-1940.164) (-2097.375) (-1900.533) -- 0:03:14
929000 -- (-1920.111) [-1898.222] (-2062.075) (-1920.536) * [-1900.462] (-1929.970) (-2080.134) (-1913.013) -- 0:03:11
930000 -- (-1929.141) [-1898.822] (-2072.487) (-1906.310) * [-1903.352] (-1913.314) (-2074.273) (-1919.767) -- 0:03:08
Average standard deviation of split frequencies: 0.016914
931000 -- (-1920.499) [-1909.508] (-2034.778) (-1910.501) * [-1884.428] (-1934.894) (-2068.831) (-1901.573) -- 0:03:06
932000 -- (-1929.712) [-1911.864] (-2037.279) (-1928.541) * (-1891.878) (-1917.302) (-2052.410) [-1899.349] -- 0:03:03
933000 -- [-1913.581] (-1902.690) (-2036.945) (-1943.921) * (-1892.883) (-1922.389) (-2059.544) [-1896.179] -- 0:03:00
934000 -- [-1909.723] (-1903.035) (-2049.992) (-1906.634) * (-1895.873) (-1918.870) (-2058.008) [-1894.961] -- 0:02:57
935000 -- (-1929.035) [-1895.201] (-2065.552) (-1931.463) * [-1897.328] (-1940.290) (-2051.640) (-1887.363) -- 0:02:55
Average standard deviation of split frequencies: 0.017106
936000 -- (-1920.293) [-1911.053] (-2044.835) (-1910.353) * [-1884.592] (-1956.362) (-2038.788) (-1902.911) -- 0:02:52
937000 -- (-1940.840) [-1882.482] (-2056.517) (-1911.697) * [-1887.380] (-1946.189) (-2054.438) (-1908.809) -- 0:02:49
938000 -- (-1947.652) [-1892.128] (-2061.944) (-1922.989) * [-1892.654] (-1932.764) (-2053.773) (-1907.118) -- 0:02:47
939000 -- (-1949.391) [-1900.952] (-2072.766) (-1922.420) * [-1885.127] (-1953.315) (-2053.916) (-1900.688) -- 0:02:44
940000 -- (-1922.217) [-1886.280] (-2066.383) (-1942.843) * [-1890.362] (-1955.766) (-2049.383) (-1894.403) -- 0:02:41
Average standard deviation of split frequencies: 0.017253
941000 -- (-1928.712) [-1878.813] (-2062.595) (-1937.043) * [-1890.284] (-1947.796) (-2066.921) (-1894.722) -- 0:02:38
942000 -- (-1933.936) [-1889.373] (-2071.399) (-1937.649) * [-1877.933] (-1958.347) (-2059.066) (-1903.983) -- 0:02:36
943000 -- (-1932.384) [-1889.925] (-2059.371) (-1962.015) * (-1893.306) (-1941.989) (-2063.147) [-1896.352] -- 0:02:33
944000 -- (-1931.191) [-1892.473] (-2048.074) (-1939.217) * [-1891.512] (-1961.234) (-2049.383) (-1904.707) -- 0:02:30
945000 -- (-1921.191) [-1887.378] (-2065.661) (-1936.441) * [-1888.739] (-1946.749) (-2066.466) (-1922.996) -- 0:02:28
Average standard deviation of split frequencies: 0.017511
946000 -- (-1923.863) [-1887.666] (-2056.501) (-1924.949) * [-1878.829] (-1947.008) (-2069.314) (-1897.420) -- 0:02:25
947000 -- (-1925.208) [-1894.146] (-2057.018) (-1926.373) * [-1878.493] (-1930.109) (-2079.893) (-1890.497) -- 0:02:22
948000 -- (-1938.754) [-1899.412] (-2052.492) (-1927.389) * [-1885.666] (-1942.892) (-2078.676) (-1902.330) -- 0:02:19
949000 -- (-1934.585) [-1896.790] (-2062.388) (-1925.471) * [-1901.274] (-1943.901) (-2078.591) (-1898.628) -- 0:02:17
950000 -- (-1940.048) [-1891.367] (-2045.621) (-1915.811) * [-1896.988] (-1934.570) (-2101.142) (-1891.931) -- 0:02:14
Average standard deviation of split frequencies: 0.017869
951000 -- (-1959.774) [-1894.001] (-2046.962) (-1922.178) * [-1896.824] (-1940.598) (-2078.964) (-1888.472) -- 0:02:11
952000 -- (-1953.611) [-1886.911] (-2037.827) (-1916.508) * [-1905.314] (-1956.222) (-2061.654) (-1899.482) -- 0:02:09
953000 -- (-1938.446) [-1880.158] (-2042.520) (-1915.018) * [-1909.457] (-1934.141) (-2057.871) (-1925.548) -- 0:02:06
954000 -- (-1932.029) [-1888.254] (-2045.512) (-1917.160) * [-1895.068] (-1962.579) (-2052.839) (-1891.119) -- 0:02:03
955000 -- (-1922.213) [-1882.924] (-2053.312) (-1950.084) * [-1878.495] (-1931.562) (-2061.648) (-1894.013) -- 0:02:00
Average standard deviation of split frequencies: 0.017639
956000 -- (-1915.785) [-1886.245] (-2066.170) (-1910.359) * [-1870.584] (-1935.594) (-2058.208) (-1891.526) -- 0:01:58
957000 -- (-1912.047) [-1896.228] (-2054.206) (-1911.208) * [-1878.773] (-1926.093) (-2081.935) (-1907.419) -- 0:01:55
958000 -- (-1906.934) [-1891.040] (-2056.039) (-1911.433) * [-1877.456] (-1940.708) (-2070.099) (-1924.811) -- 0:01:52
959000 -- (-1923.828) [-1889.310] (-2054.916) (-1915.781) * [-1893.795] (-1907.821) (-2067.068) (-1921.184) -- 0:01:50
960000 -- (-1916.012) [-1892.137] (-2059.266) (-1919.674) * [-1898.422] (-1916.038) (-2080.006) (-1932.389) -- 0:01:47
Average standard deviation of split frequencies: 0.017726
961000 -- (-1915.030) [-1888.589] (-2053.761) (-1903.738) * [-1894.630] (-1930.819) (-2068.711) (-1944.622) -- 0:01:44
962000 -- (-1920.635) [-1890.411] (-2056.663) (-1900.877) * [-1916.382] (-1914.685) (-2054.309) (-1933.894) -- 0:01:42
963000 -- (-1923.812) [-1882.981] (-2049.623) (-1908.730) * [-1911.487] (-1918.610) (-2073.858) (-1938.989) -- 0:01:39
964000 -- (-1920.855) [-1889.964] (-2051.042) (-1945.134) * (-1927.079) [-1907.668] (-2080.700) (-1940.203) -- 0:01:36
965000 -- (-1925.417) [-1905.760] (-2044.109) (-1957.570) * (-1898.762) [-1904.040] (-2075.332) (-1957.507) -- 0:01:33
Average standard deviation of split frequencies: 0.017594
966000 -- (-1928.840) [-1902.952] (-2062.054) (-1941.649) * (-1914.820) [-1903.806] (-2073.648) (-1937.594) -- 0:01:31
967000 -- (-1951.703) [-1910.203] (-2066.529) (-1937.921) * (-1920.316) [-1896.589] (-2083.993) (-1942.068) -- 0:01:28
968000 -- (-1930.217) [-1912.616] (-2076.201) (-1933.012) * (-1915.566) [-1910.656] (-2076.680) (-1934.656) -- 0:01:25
969000 -- (-1931.219) [-1908.282] (-2072.509) (-1921.412) * (-1935.051) [-1901.270] (-2067.872) (-1914.262) -- 0:01:23
970000 -- (-1926.819) (-1905.617) (-2061.867) [-1919.936] * (-1911.344) [-1904.911] (-2067.937) (-1927.231) -- 0:01:20
Average standard deviation of split frequencies: 0.017722
971000 -- (-1933.518) [-1897.344] (-2063.537) (-1924.395) * [-1902.115] (-1920.405) (-2089.476) (-1917.929) -- 0:01:17
972000 -- (-1925.877) [-1908.051] (-2059.639) (-1926.130) * [-1903.787] (-1908.421) (-2061.549) (-1912.115) -- 0:01:15
973000 -- (-1927.241) [-1907.672] (-2047.205) (-1929.675) * [-1906.454] (-1914.420) (-2061.351) (-1928.377) -- 0:01:12
974000 -- (-1931.654) [-1912.580] (-2074.590) (-1916.632) * [-1911.353] (-1921.567) (-2052.658) (-1935.574) -- 0:01:09
975000 -- (-1927.072) [-1904.275] (-2060.139) (-1914.240) * (-1909.295) [-1917.230] (-2055.276) (-1939.879) -- 0:01:07
Average standard deviation of split frequencies: 0.017490
976000 -- (-1912.642) [-1913.259] (-2045.010) (-1928.918) * [-1901.590] (-1908.371) (-2049.700) (-1920.290) -- 0:01:04
977000 -- (-1936.574) [-1908.800] (-2058.813) (-1926.932) * [-1887.838] (-1919.172) (-2071.844) (-1949.992) -- 0:01:01
978000 -- (-1923.416) [-1904.918] (-2059.414) (-1923.952) * [-1899.451] (-1947.525) (-2071.191) (-1928.698) -- 0:00:59
979000 -- [-1915.664] (-1921.180) (-2060.898) (-1913.419) * (-1910.310) [-1919.365] (-2074.406) (-1944.413) -- 0:00:56
980000 -- [-1920.299] (-1907.452) (-2047.659) (-1904.401) * (-1911.957) [-1914.173] (-2081.577) (-1934.925) -- 0:00:53
Average standard deviation of split frequencies: 0.017499
981000 -- (-1905.561) (-1910.492) (-2056.971) [-1904.682] * (-1915.427) [-1908.393] (-2070.157) (-1915.337) -- 0:00:51
982000 -- [-1898.851] (-1925.894) (-2074.775) (-1901.048) * (-1911.948) (-1908.040) (-2074.638) [-1908.774] -- 0:00:48
983000 -- (-1902.603) (-1932.325) (-2050.334) [-1897.764] * (-1928.572) (-1909.407) (-2080.236) [-1913.237] -- 0:00:45
984000 -- (-1922.934) (-1922.906) (-2056.406) [-1905.436] * (-1926.349) (-1909.660) (-2073.531) [-1909.140] -- 0:00:43
985000 -- (-1921.834) (-1926.311) (-2059.375) [-1904.830] * (-1903.934) (-1912.835) (-2081.471) [-1899.635] -- 0:00:40
Average standard deviation of split frequencies: 0.017262
986000 -- (-1923.489) (-1920.422) (-2056.030) [-1898.521] * (-1917.445) (-1942.052) (-2076.006) [-1897.633] -- 0:00:37
987000 -- (-1917.393) (-1928.842) (-2062.652) [-1906.043] * (-1906.897) (-1933.915) (-2075.598) [-1902.456] -- 0:00:35
988000 -- (-1920.727) (-1935.187) (-2057.684) [-1888.612] * (-1917.851) (-1944.402) (-2081.679) [-1901.957] -- 0:00:32
989000 -- (-1930.522) (-1928.517) (-2057.735) [-1905.353] * [-1921.186] (-1942.423) (-2083.216) (-1915.794) -- 0:00:29
990000 -- (-1911.845) (-1931.973) (-2053.648) [-1892.863] * (-1923.734) (-1929.095) (-2086.018) [-1916.778] -- 0:00:26
Average standard deviation of split frequencies: 0.017197
991000 -- (-1919.692) (-1951.909) (-2049.344) [-1909.336] * (-1922.344) (-1931.284) (-2094.371) [-1920.724] -- 0:00:24
992000 -- (-1911.356) (-1938.593) (-2052.398) [-1908.112] * [-1916.072] (-1925.398) (-2095.765) (-1923.552) -- 0:00:21
993000 -- (-1919.660) (-1939.833) (-2054.666) [-1904.689] * [-1910.211] (-1942.351) (-2082.761) (-1924.958) -- 0:00:18
994000 -- [-1907.124] (-1950.245) (-2055.404) (-1898.427) * [-1915.272] (-1945.441) (-2069.879) (-1915.595) -- 0:00:16
995000 -- [-1905.030] (-1939.617) (-2062.609) (-1890.596) * (-1901.104) (-1933.426) (-2092.186) [-1912.645] -- 0:00:13
Average standard deviation of split frequencies: 0.017271
996000 -- [-1903.252] (-1928.218) (-2060.991) (-1920.985) * (-1901.950) [-1907.200] (-2073.426) (-1920.436) -- 0:00:10
997000 -- [-1887.935] (-1934.596) (-2065.029) (-1936.008) * (-1905.863) [-1897.679] (-2075.844) (-1917.508) -- 0:00:08
998000 -- [-1896.452] (-1936.661) (-2061.795) (-1900.566) * (-1925.408) (-1913.269) (-2087.452) [-1901.637] -- 0:00:05
999000 -- (-1905.683) (-1927.453) (-2057.105) [-1895.504] * [-1909.288] (-1927.057) (-2079.523) (-1897.010) -- 0:00:02
1000000 -- (-1911.711) (-1929.388) (-2054.556) [-1887.873] * (-1931.788) (-1927.164) (-2083.956) [-1907.077] -- 0:00:00
Average standard deviation of split frequencies: 0.017331
Analysis completed in 44 mins 50 seconds
Analysis used 2686.69 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -1867.66
Likelihood of best state for "cold" chain of run 2 was -1872.30
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
52.3 % ( 42 %) Dirichlet(Revmat{all})
67.7 % ( 66 %) Slider(Revmat{all})
27.5 % ( 21 %) Dirichlet(Pi{all})
30.0 % ( 29 %) Slider(Pi{all})
53.6 % ( 31 %) Multiplier(Alpha{1,2})
59.0 % ( 29 %) Multiplier(Alpha{3})
64.7 % ( 46 %) Slider(Pinvar{all})
77.1 % ( 74 %) ExtSPR(Tau{all},V{all})
75.1 % ( 68 %) ExtTBR(Tau{all},V{all})
82.1 % ( 76 %) NNI(Tau{all},V{all})
69.7 % ( 63 %) ParsSPR(Tau{all},V{all})
27.4 % ( 25 %) Multiplier(V{all})
81.8 % ( 83 %) Nodeslider(V{all})
25.5 % ( 28 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
53.1 % ( 34 %) Dirichlet(Revmat{all})
67.8 % ( 61 %) Slider(Revmat{all})
27.2 % ( 25 %) Dirichlet(Pi{all})
29.2 % ( 21 %) Slider(Pi{all})
52.9 % ( 38 %) Multiplier(Alpha{1,2})
58.3 % ( 31 %) Multiplier(Alpha{3})
63.7 % ( 45 %) Slider(Pinvar{all})
77.1 % ( 73 %) ExtSPR(Tau{all},V{all})
75.1 % ( 84 %) ExtTBR(Tau{all},V{all})
82.1 % ( 80 %) NNI(Tau{all},V{all})
69.5 % ( 71 %) ParsSPR(Tau{all},V{all})
27.5 % ( 30 %) Multiplier(V{all})
81.9 % ( 77 %) Nodeslider(V{all})
25.6 % ( 25 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.08 0.00 0.00
2 | 166686 0.09 0.00
3 | 166353 166668 0.00
4 | 167071 166208 167014
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.09 0.00 0.00
2 | 166630 0.08 0.00
3 | 167003 166497 0.00
4 | 166884 166276 166710
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -1886.39
| 2 1 |
| 2 2 2 |
| 2 1 1 11 |
| 2 1 2 21 22 1 2 |
| 2 1 2 22 1 2 11 1 22 |
| 1 11 1 11 2 2 1 1 1 |
| 2 *2 22 2 2 2 1 |
|11 1 1 2 2 2 2 * 2 |
| 2 1 1 2 1 2 1 1 1 2 11 2 1|
| 22 12 2 1 1 1 1 |
| 2 1 2 1 121 2 1 1 |
| 1 2 1 1 2 1 2 2 2 |
| 2 1 1 2 |
| 11 2 2 2 1 |
|2 2 1 1 2|
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -1910.00
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1877.55 -1927.48
2 -1873.11 -1925.33
--------------------------------------
TOTAL -1873.79 -1926.90
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.236069 0.000954 0.184719 0.301985 0.233667 1270.31 1385.66 1.001
r(A<->C){all} 0.104661 0.000989 0.046215 0.165557 0.101557 340.72 419.26 1.000
r(A<->G){all} 0.166966 0.001515 0.095274 0.241704 0.164553 374.29 376.52 1.000
r(A<->T){all} 0.067401 0.000468 0.028047 0.108955 0.065633 559.01 564.06 1.001
r(C<->G){all} 0.055767 0.000484 0.017747 0.099500 0.053186 406.09 448.13 1.002
r(C<->T){all} 0.527624 0.002620 0.429216 0.622228 0.527871 342.60 383.97 1.000
r(G<->T){all} 0.077581 0.000475 0.039164 0.120387 0.075352 445.83 520.47 1.001
pi(A){all} 0.227062 0.000244 0.197420 0.258568 0.227014 850.25 882.73 1.000
pi(C){all} 0.218632 0.000226 0.190019 0.248977 0.218051 871.98 948.92 1.000
pi(G){all} 0.226425 0.000245 0.195433 0.256700 0.225947 842.80 868.51 1.000
pi(T){all} 0.327881 0.000292 0.294786 0.360498 0.327874 593.97 744.77 1.001
alpha{1,2} 0.275846 0.024197 0.005442 0.554970 0.246880 789.13 789.94 1.000
alpha{3} 2.304890 1.614647 0.311680 4.771338 2.039013 932.23 984.00 1.000
pinvar{all} 0.478707 0.013146 0.246878 0.674712 0.498547 447.95 498.54 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C156
2 -- C65
3 -- C31
4 -- C71
5 -- C108
6 -- C168
7 -- C325
8 -- C144
9 -- C117
10 -- C122
11 -- C180
12 -- C154
13 -- C331
14 -- C660
15 -- C570
16 -- C547
17 -- C587
18 -- C82
19 -- C363
20 -- C210
21 -- C166
22 -- C195
23 -- C489
24 -- C337
25 -- C334
26 -- C510
27 -- C186
28 -- C208
29 -- C343
30 -- C209
31 -- C44
32 -- C205
33 -- C218
34 -- C571
35 -- C351
36 -- C564
37 -- C91
38 -- C226
39 -- C227
40 -- C356
41 -- C164
42 -- C642
43 -- C248
44 -- C238
45 -- C60
46 -- C360
47 -- C106
48 -- C302
49 -- C66
50 -- C528
51 -- C250
52 -- C366
53 -- C112
54 -- C440
55 -- C126
56 -- C506
57 -- C552
58 -- C262
59 -- C372
60 -- C118
61 -- C578
62 -- C33
63 -- C576
64 -- C274
65 -- C378
66 -- C124
67 -- C196
68 -- C103
69 -- C502
70 -- C600
71 -- C286
72 -- C384
73 -- C130
74 -- C247
75 -- C562
76 -- C624
77 -- C298
78 -- C505
79 -- C390
80 -- C136
81 -- C391
82 -- C622
83 -- C648
84 -- C310
85 -- C396
86 -- C142
87 -- C535
88 -- C682
89 -- C575
90 -- C672
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
--------------------------------------------------------------------------------
1 -- .**********************************************************************
2 -- .*.....................................................................
3 -- ..*....................................................................
4 -- ...*...................................................................
5 -- ....*..................................................................
6 -- .....*.................................................................
7 -- ......*................................................................
8 -- .......*...............................................................
9 -- ........*..............................................................
10 -- .........*.............................................................
11 -- ..........*............................................................
12 -- ...........*...........................................................
13 -- ............*..........................................................
14 -- .............*.........................................................
15 -- ..............*........................................................
16 -- ...............*.......................................................
17 -- ................*......................................................
18 -- .................*.....................................................
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20 -- ...................*...................................................
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25 -- ........................*..............................................
26 -- .........................*.............................................
27 -- ..........................*............................................
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30 -- .............................*.........................................
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90 -- .......................................................................
91 -- ......................*...*.....*................................*.....
92 -- ....................................*.........*..*.....................
93 -- .....*..*..*.....*......................*...........*.*................
94 -- .....*..*..*.....*..*.*...*.....*.*.....*...........*.*......*.*.*.....
95 -- ..........................*......................................*.....
96 -- ..........................*.....*................................*.....
97 -- .....*..*..*..........................................*................
98 -- ......................*...*.....*.*..........................*.*.*.....
99 -- .....*..*..*.....*....*...*.....*.*.....*...........*.*......*.*.*.....
100 -- .......................................................................
101 -- ......................*...*.....*.*..........................*.*.*.....
102 -- ......................*...*.....*............................*.*.*.....
103 -- .............................................................*.*.......
104 -- .............*....................................................*....
105 -- .................*......................*..............................
106 -- ..........*............*...................................*.........*.
107 -- ...*.....*.............................................................
108 -- .***.******************************************************************
109 -- ..............................................*..*.....................
110 -- ....................................*.........*........................
111 -- .....*..*..*............................*...........*.*................
112 -- ....................................*............*.....................
113 -- ..........*............*.............................................*.
114 -- ..........*............*...............................................
115 -- .....*..*..*........................................*.*................
116 -- .....*..*..*........................................*.*................
117 -- .....*..*..............................................................
118 -- ....................................................*..................
119 -- ..........*..........................................................*.
120 -- .....*..*.............................................*................
121 -- .....*................................................*................
122 -- ........*..*...........................................................
123 -- ...........*..........................................*................
124 -- .....*..*..*...........................................................
125 -- ........*.............................................*................
126 -- .....*.....*...........................................................
127 -- .......................*.............................................*.
128 -- .....*.....*..........................................*................
129 -- ........*..*..........................................*................
130 -- .....*..*..*.....*....*...*.....*.*.....*...........*.*......*.*.*.....
131 -- .....*..*..*..........................................*................
132 -- .......................*...................................*...........
133 -- ..........*............*...................................*...........
134 -- ...........................................................*.........*.
135 -- ..........*................................................*...........
136 -- ..........*................................................*.........*.
137 -- ......................*...*.....*............................*...*.....
138 -- .......................*...................................*.........*.
139 -- .....*..*..*.....*..*...................*...........*.*................
140 -- .................*......................*...........*..................
141 -- .....*..*..*.....*......................*...........*.*................
142 -- .....*..*..*.....*......................*.............*................
143 -- .................*......................*..............................
144 -- .................*......................*...........*..................
145 -- .....*..*..*.....*......................*.............*................
146 -- ..................................*..........................*.*.......
147 -- ..................................*....................................
--------------------------------------------------------------------------------
ID -- Partition (continued)
--------------------------------------------------------------------------------
1 -- *******************
2 -- ...................
3 -- ...................
4 -- ...................
5 -- ...................
6 -- ...................
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8 -- ...................
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42 -- ...................
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44 -- ...................
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46 -- ...................
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48 -- ...................
49 -- ...................
50 -- ...................
51 -- ...................
52 -- ...................
53 -- ...................
54 -- ...................
55 -- ...................
56 -- ...................
57 -- ...................
58 -- ...................
59 -- ...................
60 -- ...................
61 -- ...................
62 -- ...................
63 -- ...................
64 -- ...................
65 -- ...................
66 -- ...................
67 -- ...................
68 -- ...................
69 -- ...................
70 -- ...................
71 -- ...................
72 -- *..................
73 -- .*.................
74 -- ..*................
75 -- ...*...............
76 -- ....*..............
77 -- .....*.............
78 -- ......*............
79 -- .......*...........
80 -- ........*..........
81 -- .........*.........
82 -- ..........*........
83 -- ...........*.......
84 -- ............*......
85 -- .............*.....
86 -- ..............*....
87 -- ...............*...
88 -- ................*..
89 -- .................*.
90 -- ..................*
91 -- ...................
92 -- ...................
93 -- .*.................
94 -- .*..............*..
95 -- ...................
96 -- ...................
97 -- ...................
98 -- ...................
99 -- .*..............*..
100 -- ...*.............*.
101 -- ................*..
102 -- ...................
103 -- ...................
104 -- ...................
105 -- ...................
106 -- ...................
107 -- ...................
108 -- *******************
109 -- ...................
110 -- ...................
111 -- .*.................
112 -- ...................
113 -- ...................
114 -- ...................
115 -- .*.................
116 -- ...................
117 -- ...................
118 -- .*.................
119 -- ...................
120 -- ...................
121 -- ...................
122 -- ...................
123 -- ...................
124 -- ...................
125 -- ...................
126 -- ...................
127 -- ...................
128 -- ...................
129 -- ...................
130 -- .*.................
131 -- .*.................
132 -- ...................
133 -- ...................
134 -- ...................
135 -- ...................
136 -- ...................
137 -- ...................
138 -- ...................
139 -- .*.................
140 -- .*.................
141 -- ...................
142 -- ...................
143 -- .*.................
144 -- ...................
145 -- .*.................
146 -- ...................
147 -- ................*..
--------------------------------------------------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
-----------------------------------------------------------------
91 3002 1.000000 0.000000 1.000000 1.000000 2
92 2999 0.999001 0.001413 0.998001 1.000000 2
93 2989 0.995670 0.006124 0.991339 1.000000 2
94 2979 0.992338 0.004240 0.989340 0.995336 2
95 2963 0.987009 0.002355 0.985343 0.988674 2
96 2862 0.953364 0.013191 0.944037 0.962692 2
97 2755 0.917722 0.012719 0.908728 0.926716 2
98 2737 0.911726 0.026852 0.892738 0.930713 2
99 2580 0.859427 0.011306 0.851432 0.867422 2
100 2526 0.841439 0.003769 0.838774 0.844104 2
101 2297 0.765157 0.034390 0.740839 0.789474 2
102 2293 0.763824 0.016488 0.752165 0.775483 2
103 2279 0.759161 0.008009 0.753498 0.764823 2
104 1832 0.610260 0.066895 0.562958 0.657562 2
105 1779 0.592605 0.023083 0.576282 0.608927 2
106 1555 0.517988 0.042869 0.487675 0.548301 2
107 1253 0.417388 0.026852 0.398401 0.436376 2
108 1236 0.411726 0.096102 0.343771 0.479680 2
109 1052 0.350433 0.039572 0.322452 0.378414 2
110 995 0.331446 0.024026 0.314457 0.348434 2
111 985 0.328115 0.019315 0.314457 0.341772 2
112 955 0.318121 0.015546 0.307129 0.329114 2
113 787 0.262159 0.092805 0.196536 0.327781 2
114 736 0.245170 0.029208 0.224517 0.265823 2
115 675 0.224850 0.002355 0.223185 0.226516 2
116 643 0.214191 0.000471 0.213857 0.214524 2
117 629 0.209527 0.012719 0.200533 0.218521 2
118 629 0.209527 0.015546 0.198534 0.220520 2
119 627 0.208861 0.003298 0.206529 0.211193 2
120 612 0.203864 0.005653 0.199867 0.207861 2
121 608 0.202532 0.024497 0.185210 0.219853 2
122 598 0.199201 0.019786 0.185210 0.213191 2
123 581 0.193538 0.001413 0.192538 0.194537 2
124 578 0.192538 0.011306 0.184544 0.200533 2
125 572 0.190540 0.016017 0.179214 0.201865 2
126 559 0.186209 0.010835 0.178548 0.193871 2
127 555 0.184877 0.000471 0.184544 0.185210 2
128 547 0.182212 0.001413 0.181213 0.183211 2
129 538 0.179214 0.000000 0.179214 0.179214 2
130 530 0.176549 0.031092 0.154564 0.198534 2
131 525 0.174883 0.000471 0.174550 0.175217 2
132 506 0.168554 0.002827 0.166556 0.170553 2
133 498 0.165889 0.042398 0.135909 0.195869 2
134 480 0.159893 0.000000 0.159893 0.159893 2
135 468 0.155896 0.024497 0.138574 0.173218 2
136 424 0.141239 0.020728 0.126582 0.155896 2
137 423 0.140906 0.015546 0.129913 0.151899 2
138 409 0.136243 0.010835 0.128581 0.143904 2
139 403 0.134244 0.007066 0.129247 0.139241 2
140 400 0.133245 0.000000 0.133245 0.133245 2
141 394 0.131246 0.012248 0.122585 0.139907 2
142 359 0.119587 0.004240 0.116589 0.122585 2
143 347 0.115590 0.000471 0.115256 0.115923 2
144 339 0.112925 0.015546 0.101932 0.123917 2
145 327 0.108927 0.014604 0.098601 0.119254 2
146 308 0.102598 0.015075 0.091939 0.113258 2
147 264 0.087941 0.027323 0.068621 0.107262 2
-----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
--------------------------------------------------------------------------------------------
length{all}[1] 0.002715 0.000003 0.000333 0.005803 0.002403 1.005 2
length{all}[2] 0.000769 0.000001 0.000000 0.002325 0.000539 1.000 2
length{all}[3] 0.001507 0.000001 0.000090 0.003619 0.001238 1.000 2
length{all}[4] 0.005014 0.000005 0.001329 0.009324 0.004661 1.003 2
length{all}[5] 0.001978 0.000002 0.000083 0.004468 0.001724 1.000 2
length{all}[6] 0.000776 0.000001 0.000000 0.002284 0.000534 1.000 2
length{all}[7] 0.003173 0.000003 0.000552 0.006240 0.002929 1.004 2
length{all}[8] 0.001456 0.000001 0.000041 0.003615 0.001198 1.000 2
length{all}[9] 0.000751 0.000001 0.000001 0.002283 0.000526 1.000 2
length{all}[10] 0.001128 0.000001 0.000002 0.003002 0.000888 1.002 2
length{all}[11] 0.000835 0.000001 0.000000 0.002552 0.000579 1.000 2
length{all}[12] 0.000759 0.000001 0.000001 0.002268 0.000524 1.002 2
length{all}[13] 0.002302 0.000002 0.000214 0.004868 0.002064 1.000 2
length{all}[14] 0.003279 0.000003 0.000421 0.006647 0.002958 1.006 2
length{all}[15] 0.000726 0.000001 0.000000 0.002271 0.000470 1.002 2
length{all}[16] 0.000741 0.000001 0.000000 0.002207 0.000526 1.000 2
length{all}[17] 0.000787 0.000001 0.000001 0.002316 0.000544 1.001 2
length{all}[18] 0.003070 0.000002 0.000409 0.005952 0.002795 1.000 2
length{all}[19] 0.000741 0.000001 0.000002 0.002215 0.000511 1.003 2
length{all}[20] 0.000747 0.000001 0.000001 0.002183 0.000499 1.001 2
length{all}[21] 0.005304 0.000005 0.001835 0.009915 0.005010 1.001 2
length{all}[22] 0.001470 0.000001 0.000030 0.003691 0.001190 1.000 2
length{all}[23] 0.000794 0.000001 0.000001 0.002375 0.000549 1.000 2
length{all}[24] 0.000828 0.000001 0.000000 0.002480 0.000563 1.000 2
length{all}[25] 0.002296 0.000002 0.000307 0.005033 0.002012 1.000 2
length{all}[26] 0.000777 0.000001 0.000001 0.002208 0.000542 1.002 2
length{all}[27] 0.001548 0.000001 0.000044 0.003832 0.001280 1.001 2
length{all}[28] 0.000775 0.000001 0.000000 0.002383 0.000516 1.000 2
length{all}[29] 0.000755 0.000001 0.000000 0.002383 0.000483 1.000 2
length{all}[30] 0.000757 0.000001 0.000001 0.002232 0.000521 1.001 2
length{all}[31] 0.001524 0.000001 0.000051 0.003814 0.001207 1.000 2
length{all}[32] 0.000803 0.000001 0.000002 0.002424 0.000544 1.000 2
length{all}[33] 0.001561 0.000001 0.000032 0.003782 0.001318 1.000 2
length{all}[34] 0.000747 0.000001 0.000000 0.002242 0.000515 1.001 2
length{all}[35] 0.013299 0.000013 0.007126 0.020789 0.012987 1.001 2
length{all}[36] 0.000777 0.000001 0.000000 0.002316 0.000540 1.005 2
length{all}[37] 0.001609 0.000001 0.000008 0.003878 0.001334 1.000 2
length{all}[38] 0.000739 0.000001 0.000000 0.002173 0.000506 1.000 2
length{all}[39] 0.000752 0.000001 0.000001 0.002178 0.000546 1.000 2
length{all}[40] 0.000748 0.000001 0.000001 0.002302 0.000508 1.000 2
length{all}[41] 0.001740 0.000001 0.000025 0.004065 0.001484 1.000 2
length{all}[42] 0.000794 0.000001 0.000001 0.002298 0.000540 1.000 2
length{all}[43] 0.006251 0.000005 0.002156 0.010615 0.005964 1.002 2
length{all}[44] 0.000775 0.000001 0.000000 0.002299 0.000520 1.000 2
length{all}[45] 0.001468 0.000001 0.000007 0.003500 0.001193 1.000 2
length{all}[46] 0.000733 0.000001 0.000001 0.002199 0.000488 1.000 2
length{all}[47] 0.000768 0.000001 0.000000 0.002284 0.000537 1.001 2
length{all}[48] 0.000749 0.000001 0.000001 0.002379 0.000492 1.000 2
length{all}[49] 0.000792 0.000001 0.000000 0.002319 0.000554 1.000 2
length{all}[50] 0.000800 0.000001 0.000000 0.002308 0.000557 1.000 2
length{all}[51] 0.000775 0.000001 0.000000 0.002251 0.000548 1.000 2
length{all}[52] 0.000750 0.000001 0.000000 0.002306 0.000494 1.000 2
length{all}[53] 0.003020 0.000002 0.000430 0.006019 0.002765 1.002 2
length{all}[54] 0.001525 0.000001 0.000071 0.003550 0.001285 1.002 2
length{all}[55] 0.000768 0.000001 0.000000 0.002286 0.000517 1.001 2
length{all}[56] 0.000766 0.000001 0.000001 0.002344 0.000531 1.000 2
length{all}[57] 0.000753 0.000001 0.000000 0.002293 0.000503 1.000 2
length{all}[58] 0.003799 0.000003 0.000847 0.007003 0.003557 1.002 2
length{all}[59] 0.000746 0.000001 0.000000 0.002169 0.000541 1.000 2
length{all}[60] 0.002438 0.000002 0.000289 0.005393 0.002119 1.002 2
length{all}[61] 0.000760 0.000001 0.000000 0.002251 0.000525 1.001 2
length{all}[62] 0.002489 0.000002 0.000205 0.005465 0.002185 1.000 2
length{all}[63] 0.000742 0.000001 0.000000 0.002268 0.000501 1.000 2
length{all}[64] 0.006956 0.000006 0.002613 0.012088 0.006692 1.007 2
length{all}[65] 0.000783 0.000001 0.000000 0.002365 0.000547 1.000 2
length{all}[66] 0.001562 0.000001 0.000035 0.003868 0.001283 1.000 2
length{all}[67] 0.001026 0.000001 0.000002 0.002893 0.000748 1.000 2
length{all}[68] 0.001502 0.000001 0.000037 0.003394 0.001300 1.000 2
length{all}[69] 0.000725 0.000001 0.000000 0.002142 0.000510 1.003 2
length{all}[70] 0.001565 0.000001 0.000032 0.003774 0.001305 1.000 2
length{all}[71] 0.000755 0.000001 0.000001 0.002238 0.000537 1.000 2
length{all}[72] 0.000745 0.000001 0.000001 0.002250 0.000498 1.000 2
length{all}[73] 0.000719 0.000001 0.000000 0.002223 0.000480 1.002 2
length{all}[74] 0.001585 0.000001 0.000005 0.003855 0.001277 1.000 2
length{all}[75] 0.000857 0.000001 0.000001 0.002539 0.000593 1.000 2
length{all}[76] 0.000764 0.000001 0.000000 0.002246 0.000505 1.000 2
length{all}[77] 0.000789 0.000001 0.000000 0.002369 0.000535 1.001 2
length{all}[78] 0.000743 0.000001 0.000001 0.002245 0.000502 1.000 2
length{all}[79] 0.001494 0.000001 0.000049 0.003525 0.001232 1.001 2
length{all}[80] 0.003064 0.000003 0.000559 0.006257 0.002781 1.003 2
length{all}[81] 0.000756 0.000001 0.000000 0.002238 0.000523 1.001 2
length{all}[82] 0.000776 0.000001 0.000000 0.002276 0.000548 1.003 2
length{all}[83] 0.000752 0.000001 0.000000 0.002281 0.000512 1.000 2
length{all}[84] 0.002258 0.000002 0.000280 0.004938 0.001931 1.000 2
length{all}[85] 0.003758 0.000003 0.000847 0.007299 0.003551 1.003 2
length{all}[86] 0.000734 0.000001 0.000000 0.002197 0.000500 1.000 2
length{all}[87] 0.000727 0.000001 0.000001 0.002065 0.000521 1.002 2
length{all}[88] 0.004359 0.000004 0.000957 0.008396 0.004075 1.000 2
length{all}[89] 0.000849 0.000001 0.000000 0.002457 0.000598 1.000 2
length{all}[90] 0.001455 0.000001 0.000083 0.003569 0.001181 1.003 2
length{all}[91] 0.003103 0.000003 0.000617 0.006362 0.002811 1.000 2
length{all}[92] 0.002226 0.000002 0.000306 0.004935 0.001920 1.001 2
length{all}[93] 0.003443 0.000003 0.000352 0.007217 0.003090 1.005 2
length{all}[94] 0.003110 0.000003 0.000291 0.006415 0.002808 1.001 2
length{all}[95] 0.001581 0.000001 0.000040 0.003938 0.001253 1.000 2
length{all}[96] 0.001545 0.000001 0.000031 0.003765 0.001291 1.000 2
length{all}[97] 0.001539 0.000001 0.000002 0.003654 0.001284 1.003 2
length{all}[98] 0.003305 0.000003 0.000302 0.006718 0.003009 1.002 2
length{all}[99] 0.002572 0.000002 0.000259 0.005399 0.002284 1.000 2
length{all}[100] 0.001539 0.000001 0.000055 0.003628 0.001328 1.001 2
length{all}[101] 0.002818 0.000004 0.000015 0.006453 0.002461 1.003 2
length{all}[102] 0.001835 0.000002 0.000007 0.004813 0.001453 1.001 2
length{all}[103] 0.001551 0.000001 0.000006 0.003848 0.001278 1.000 2
length{all}[104] 0.001551 0.000001 0.000090 0.003766 0.001285 1.000 2
length{all}[105] 0.001515 0.000001 0.000007 0.003587 0.001286 1.002 2
length{all}[106] 0.001431 0.000001 0.000051 0.003509 0.001161 1.000 2
length{all}[107] 0.001505 0.000001 0.000022 0.003431 0.001310 1.002 2
length{all}[108] 0.001596 0.000001 0.000033 0.004040 0.001304 1.000 2
length{all}[109] 0.000798 0.000001 0.000001 0.002401 0.000546 1.001 2
length{all}[110] 0.000790 0.000001 0.000001 0.002291 0.000564 1.005 2
length{all}[111] 0.001462 0.000001 0.000007 0.003612 0.001200 0.999 2
length{all}[112] 0.000756 0.000001 0.000004 0.002361 0.000514 1.002 2
length{all}[113] 0.001169 0.000001 0.000003 0.003227 0.000880 0.999 2
length{all}[114] 0.000941 0.000001 0.000003 0.002473 0.000712 1.005 2
length{all}[115] 0.000926 0.000001 0.000001 0.002681 0.000686 1.007 2
length{all}[116] 0.000836 0.000001 0.000000 0.002537 0.000567 0.999 2
length{all}[117] 0.000765 0.000001 0.000001 0.002281 0.000550 0.999 2
length{all}[118] 0.000786 0.000001 0.000002 0.002369 0.000538 0.998 2
length{all}[119] 0.001015 0.000001 0.000001 0.002947 0.000654 1.000 2
length{all}[120] 0.000801 0.000001 0.000001 0.002302 0.000568 0.999 2
length{all}[121] 0.000750 0.000001 0.000002 0.002266 0.000520 1.001 2
length{all}[122] 0.000766 0.000001 0.000001 0.002361 0.000517 0.998 2
length{all}[123] 0.000718 0.000001 0.000001 0.002157 0.000472 0.998 2
length{all}[124] 0.000768 0.000001 0.000001 0.002389 0.000511 0.998 2
length{all}[125] 0.000813 0.000001 0.000001 0.002471 0.000553 1.023 2
length{all}[126] 0.000745 0.000001 0.000001 0.002354 0.000508 1.000 2
length{all}[127] 0.000895 0.000001 0.000000 0.002676 0.000647 1.015 2
length{all}[128] 0.000756 0.000001 0.000000 0.002378 0.000506 0.999 2
length{all}[129] 0.000719 0.000000 0.000001 0.002142 0.000519 1.005 2
length{all}[130] 0.001809 0.000002 0.000020 0.004748 0.001474 0.999 2
length{all}[131] 0.000747 0.000001 0.000001 0.002195 0.000504 0.999 2
length{all}[132] 0.000893 0.000001 0.000002 0.002700 0.000634 1.005 2
length{all}[133] 0.000982 0.000001 0.000001 0.002720 0.000723 1.029 2
length{all}[134] 0.000944 0.000001 0.000001 0.002638 0.000670 0.998 2
length{all}[135] 0.000973 0.000001 0.000001 0.002801 0.000734 1.000 2
length{all}[136] 0.000928 0.000001 0.000004 0.002653 0.000660 0.998 2
length{all}[137] 0.001248 0.000001 0.000005 0.003439 0.000980 0.998 2
length{all}[138] 0.000937 0.000001 0.000000 0.003188 0.000649 1.011 2
length{all}[139] 0.002163 0.000002 0.000217 0.004660 0.001867 0.998 2
length{all}[140] 0.000885 0.000001 0.000003 0.002821 0.000579 1.004 2
length{all}[141] 0.000765 0.000001 0.000002 0.002327 0.000491 1.015 2
length{all}[142] 0.000791 0.000001 0.000003 0.002170 0.000570 1.004 2
length{all}[143] 0.000864 0.000001 0.000003 0.002398 0.000619 1.007 2
length{all}[144] 0.000717 0.000001 0.000005 0.002170 0.000484 1.009 2
length{all}[145] 0.000791 0.000001 0.000002 0.002392 0.000512 1.004 2
length{all}[146] 0.001045 0.000001 0.000011 0.003053 0.000717 0.997 2
length{all}[147] 0.002775 0.000003 0.000223 0.005791 0.002312 0.997 2
--------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.017331
Maximum standard deviation of split frequencies = 0.096102
Average PSRF for parameter values (excluding NA and >10.0) = 1.001
Maximum PSRF for parameter values = 1.029
Clade credibility values:
/--------------------------------------------------------------------- C156 (1)
|
|--------------------------------------------------------------------- C65 (2)
|
|--------------------------------------------------------------------- C31 (3)
|
|--------------------------------------------------------------------- C71 (4)
|
|--------------------------------------------------------------------- C108 (5)
|
|--------------------------------------------------------------------- C325 (7)
|
|--------------------------------------------------------------------- C144 (8)
|
|--------------------------------------------------------------------- C122 (10)
|
|--------------------------------------------------------------------- C331 (13)
|
|--------------------------------------------------------------------- C570 (15)
|
|--------------------------------------------------------------------- C547 (16)
|
|--------------------------------------------------------------------- C587 (17)
|
|--------------------------------------------------------------------- C363 (19)
|
|--------------------------------------------------------------------- C210 (20)
|
|--------------------------------------------------------------------- C195 (22)
|
|--------------------------------------------------------------------- C334 (25)
|
|--------------------------------------------------------------------- C510 (26)
|
|--------------------------------------------------------------------- C208 (28)
|
|--------------------------------------------------------------------- C343 (29)
|
|--------------------------------------------------------------------- C209 (30)
|
|--------------------------------------------------------------------- C44 (31)
|
|--------------------------------------------------------------------- C205 (32)
|
|--------------------------------------------------------------------- C571 (34)
|
|--------------------------------------------------------------------- C564 (36)
|
|--------------------------------------------------------------------- C226 (38)
|
|--------------------------------------------------------------------- C227 (39)
|
|--------------------------------------------------------------------- C356 (40)
|
|--------------------------------------------------------------------- C642 (42)
|
|--------------------------------------------------------------------- C248 (43)
|
|--------------------------------------------------------------------- C238 (44)
|
|--------------------------------------------------------------------- C60 (45)
|
|--------------------------------------------------------------------- C360 (46)
|
|--------------------------------------------------------------------- C302 (48)
|
|--------------------------------------------------------------------- C66 (49)
|
|--------------------------------------------------------------------- C250 (51)
|
|--------------------------------------------------------------------- C366 (52)
|
|--------------------------------------------------------------------- C440 (54)
|
|--------------------------------------------------------------------- C506 (56)
|
|--------------------------------------------------------------------- C552 (57)
|
|--------------------------------------------------------------------- C262 (58)
|
|--------------------------------------------------------------------- C372 (59)
|
|--------------------------------------------------------------------- C578 (61)
|
|--------------------------------------------------------------------- C576 (63)
|
|--------------------------------------------------------------------- C378 (65)
|
+--------------------------------------------------------------------- C103 (68)
|
|--------------------------------------------------------------------- C502 (69)
|
|--------------------------------------------------------------------- C286 (71)
|
|--------------------------------------------------------------------- C384 (72)
|
|--------------------------------------------------------------------- C247 (74)
|
|--------------------------------------------------------------------- C624 (76)
|
|--------------------------------------------------------------------- C298 (77)
|
|--------------------------------------------------------------------- C505 (78)
|
|--------------------------------------------------------------------- C390 (79)
|
|--------------------------------------------------------------------- C136 (80)
|
|--------------------------------------------------------------------- C391 (81)
|
|--------------------------------------------------------------------- C622 (82)
|
|--------------------------------------------------------------------- C648 (83)
|
|--------------------------------------------------------------------- C310 (84)
|
|--------------------------------------------------------------------- C396 (85)
|
|--------------------------------------------------------------------- C142 (86)
|
|--------------------------------------------------------------------- C535 (87)
|
|--------------------------------------------------------------------- C672 (90)
|
| /-------- C91 (37)
| |
|-----------------------------100----------------------------+-------- C106 (47)
| |
| \-------- C528 (50)
|
| /-------- C168 (6)
| |
| |-------- C117 (9)
| /--92--+
| | |-------- C154 (12)
| | |
| | \-------- C126 (55)
| |
| | /-------- C82 (18)
| /------------------100-----------------+--59--+
| | | \-------- C164 (41)
| | |
| | |--------------- C112 (53)
| | |
| | \--------------- C130 (73)
| |
| | /----------------------- C489 (23)
| | |
| | | /-------- C186 (27)
| /--86--+ /--100--+ /--99--+
| | | | | | \-------- C124 (66)
| | | | \---95--+
| | | /--76--+ \--------------- C218 (33)
| | | | |
| | | | | /-------- C33 (62)
| | | /---91--+ \----------76----------+
|---99--+ | | | \-------- C274 (64)
| | | | |
| | \---77--+ \-------------------------------------- C351 (35)
| | |
| | \---------------------------------------------- C682 (88)
| |
| \------------------------------------------------------------- C166 (21)
|
| /-------- C562 (75)
|-----------------------------84-----------------------------+
| \-------- C575 (89)
|
| /-------- C660 (14)
|-----------------------------61-----------------------------+
| \-------- C196 (67)
|
| /-------- C180 (11)
| |
| |-------- C337 (24)
\-----------------------------52-----------------------------+
|-------- C118 (60)
|
\-------- C600 (70)
Phylogram (based on average branch lengths):
/------- C156 (1)
|
|-- C65 (2)
|
|---- C31 (3)
|
|-------------- C71 (4)
|
|----- C108 (5)
|
|--------- C325 (7)
|
|---- C144 (8)
|
|--- C122 (10)
|
|------ C331 (13)
|
|- C570 (15)
|
|-- C547 (16)
|
|-- C587 (17)
|
|- C363 (19)
|
|- C210 (20)
|
|--- C195 (22)
|
|------ C334 (25)
|
|-- C510 (26)
|
|-- C208 (28)
|
|- C343 (29)
|
|-- C209 (30)
|
|---- C44 (31)
|
|-- C205 (32)
|
|-- C571 (34)
|
|-- C564 (36)
|
|- C226 (38)
|
|-- C227 (39)
|
|- C356 (40)
|
|-- C642 (42)
|
|----------------- C248 (43)
|
|-- C238 (44)
|
|--- C60 (45)
|
|- C360 (46)
|
|- C302 (48)
|
|-- C66 (49)
|
|-- C250 (51)
|
|- C366 (52)
|
|---- C440 (54)
|
|-- C506 (56)
|
|- C552 (57)
|
|---------- C262 (58)
|
|-- C372 (59)
|
|-- C578 (61)
|
|- C576 (63)
|
|-- C378 (65)
|
+---- C103 (68)
|
|- C502 (69)
|
|-- C286 (71)
|
|- C384 (72)
|
|---- C247 (74)
|
|- C624 (76)
|
|-- C298 (77)
|
|- C505 (78)
|
|---- C390 (79)
|
|-------- C136 (80)
|
|-- C391 (81)
|
|-- C622 (82)
|
|-- C648 (83)
|
|------ C310 (84)
|
|---------- C396 (85)
|
|- C142 (86)
|
|-- C535 (87)
|
|--- C672 (90)
|
| /---- C91 (37)
| |
|-----+- C106 (47)
| |
| \- C528 (50)
|
| /- C168 (6)
| |
| |- C117 (9)
| /---+
| | |- C154 (12)
| | |
| | \- C126 (55)
| |
| | /-------- C82 (18)
| /--------+---+
| | | \---- C164 (41)
| | |
| | |-------- C112 (53)
| | |
| | \- C130 (73)
| |
| | /-- C489 (23)
| | |
| | | /---- C186 (27)
| /------+ /-------+ /---+
| | | | | | \---- C124 (66)
| | | | \---+
| | | /---+ \---- C218 (33)
| | | | |
| | | | | /------ C33 (62)
| | | /--------+ \---+
|-------+ | | | \-------------------- C274 (64)
| | | | |
| | \------+ \-------------------------------------- C351 (35)
| | |
| | \------------ C682 (88)
| |
| \--------------- C166 (21)
|
| /-- C562 (75)
|---+
| \-- C575 (89)
|
| /-------- C660 (14)
|---+
| \-- C196 (67)
|
| /-- C180 (11)
| |
| |-- C337 (24)
\--+
|------- C118 (60)
|
\---- C600 (70)
|-------------| 0.005 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
Running FUBAR...
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\
***************** TYPES OF STANDARD ANALYSES *****************
(1) Selection Analyses
(2) Evolutionary Hypothesis Testing
(3) Relative evolutionary rate inference
(4) Coevolutionary analysis
(5) Basic Analyses
(6) Codon Selection Analyses
(7) Compartmentalization
(8) Data File Tools
(9) Miscellaneous
(10) Model Comparison
(11) Kernel Analysis Tools
(12) Molecular Clock
(13) Phylogeny Reconstruction
(14) Positive Selection
(15) Recombination
(16) Selection/Recombination
(17) Relative Rate
(18) Relative Ratio
(19) Substitution Rates
Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' *****************
(1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution).
(2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood).
(3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting).
(4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection).
(5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification).
(6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood).
(7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation).
Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types):
Analysis Description
--------------------
Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a
coding sequence alignment to determine whether some sites have been
subject to pervasive purifying or diversifying selection. v2.1
introduces two more methods for estimating the posterior distribution of
grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation
Bayes approximation (fastest). Please note that a FUBAR analysis
generates a cache and a results JSON file in the same directory as
directory as the original alignment. HyPhy needs to have write
privileges to this directory. For example if the original file is in
/home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there
will also exist FUBAR-generated files
/home/sergei/FUBAR/data/pol.nex.FUBAR.json,
/home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide
checkpointing so that a partially completed analysis can be restarted.
- __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree
(one per partition)
- __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring
selection (2013), Mol Biol Evol. 30(5):1196-205
- __Written by__: Sergei L Kosakovsky Pond
- __Contact Information__: spond@temple.edu
- __Analysis Version__: 2.1
####Choose Genetic Code
1. [**Universal**] Universal code. (Genebank transl_table=1).
2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2).
3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3).
4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4).
5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5).
6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6).
7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9).
8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10).
9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12).
10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13).
11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14).
12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15).
13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16).
14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21).
15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22).
16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23).
17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24).
18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25).
19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26).
>Please choose an option (or press q to cancel selection):
>Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`)
>A tree was found in the data file: `(C156,C65,C31,C71,C108,C325,C144,C122,C331,C570,C547,C587,C363,C210,C195,C334,C510,C208,C343,C209,C44,C205,C571,C564,C226,C227,C356,C642,C248,C238,C60,C360,C302,C66,C250,C366,C440,C506,C552,C262,C372,C578,C576,C378,C103,C502,C286,C384,C247,C624,C298,C505,C390,C136,C391,C622,C648,C310,C396,C142,C535,C672,(C91,C106,C528),((((C168,C117,C154,C126),(C82,C164),C112,C130),((((C489,((C186,C124),C218)),(C33,C274)),C351),C682)),C166),(C562,C575),(C660,C196),(C180,C337,C118,C600))`
>Would you like to use it (y/n)?
>Loaded a multiple sequence alignment with **90** sequences, **230** codons, and **1** partitions from `/data//pss_subsets/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result/original_alignment/fubar/results/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1.fna`
> FUBAR will write cache and result files to _/data//pss_subsets/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result/original_alignment/fubar/results/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result/original_alignment/fubar/results/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1.fna.FUBAR.json_, respectively
> Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer):
####Posterior estimation method
1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation)
2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed)
3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default)
>Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5):
### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model
Error:
Internal error, dumping the offending likelihood function to /tmp/hyphy.dumpInternal error in ComputeBranchCache (branch wHJDFCqC.tree_0.C672 ) reversible model cached likelihood = -4247.40748147251, directly computed likelihood = -4247.398774119658. This is most likely because a non-reversible model was incorrectly auto-detected (or specified by the model file in environment variables).
Function call stack
1 : Optimize storing into, mles, the following likelihood function:likelihoodFunction ;
-------
2 : A return statement with:1
-------
3 : A return statement with:1
-------
4 : gtr_results=estimators.FitGTR(filter_names,trees,gtr_results)
-------
5 : doGTR("fubar")
-------
6 : Call a nested list (via namespace):
Step 0.doGTR("fubar")
-------
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.47 sec, SCORE=1000, Nseq=90, Len=230
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV56 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV54 MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV89 MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV71 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV0 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV06 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV96 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV05 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV75 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV5 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV1 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_CH_FJZZ_9_2012_NA_AGK89917_1_2012_08_20_China_Swine_PEDV_M_AST13139_1_2015_09_China_Unknown_PEDV1 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV08 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV68 MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV25 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV44 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV17 MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV22 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV80 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV31 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV60 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV70 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV47 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV87 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_mutant2_M_AST13230_1_2015_09_China_Unknown_PEDV2 MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV63 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV10 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV66 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVLLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV95 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV37 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV34 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV10 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV86 MSNGFIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV08 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV43 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV09 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV4 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV05 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV18 MSNGFIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV51 MSNDSIPVEEVI----QHLRNWNFTWNIILTILLLVLQYGHYKYSVFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV64 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_mutant1_M_AST13224_1_2015_09_China_Unknown_PEDV1 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV26 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV27 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV56 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV64 MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV42 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV48 MSNGTIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV38 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV60 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV06 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV02 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV6 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV28 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV50 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV66 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV12 MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV40 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV26 MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV52 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV62 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV72 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV18 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV78 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV3 MSNGSIPVDEVIMLVLEHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV76 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV74 MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV78 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV24 MSNGFIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV03 MSNDSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV02 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV00 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV86 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV84 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV30 MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV47 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV62 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV24 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV98 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV90 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV36 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV91 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV22 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV48 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV10 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV96 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVVLYG
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV42 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_M_AST13219_1_2013_05_China_Swine_PEDV35 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV82 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVLLYG
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV72 MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG
***. ***:*** :*****************:**********..***
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV56 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV54 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV89 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV71 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV0 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV06 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV96 VKMAILWILWPLVLALSLFDAWASFQVNWVFFSFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV05 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV75 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV5 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV1 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_CH_FJZZ_9_2012_NA_AGK89917_1_2012_08_20_China_Swine_PEDV_M_AST13139_1_2015_09_China_Unknown_PEDV1 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV08 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV68 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV25 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV44 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV17 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV22 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV80 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV31 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV60 VKMAILWILWPLVLALSLFDAWASFQVNWVFFSFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV70 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV47 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV87 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_mutant2_M_AST13230_1_2015_09_China_Unknown_PEDV2 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV63 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV10 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV66 VKMAILWILWPLVLALSLFDAWASFQVNWVFFSFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV95 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV37 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV34 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV10 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV86 VKMAILWILWPLVLALSLFNAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV08 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV43 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV09 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV4 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV05 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV18 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV51 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV64 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_mutant1_M_AST13224_1_2015_09_China_Unknown_PEDV1 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV26 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV27 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV56 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV64 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV42 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV48 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFCILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV38 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV60 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV06 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV02 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV6 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV28 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV50 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV66 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV12 VKMAILWILWPLVLALSLFDAWASFQVNWVFFSFSILMACITLMLWIMYF
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV40 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV26 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV52 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV62 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV72 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV18 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV78 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV3 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV76 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV74 VKMAILWILWPLVLALSLFDASPSFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV78 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV24 VKMAILWILWPLVLALSLFNAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV03 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV02 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV00 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV86 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV84 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV30 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV47 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV62 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV24 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV98 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV90 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV36 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV91 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV22 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV48 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV10 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV96 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV42 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_M_AST13219_1_2013_05_China_Swine_PEDV35 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV82 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV72 VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF
*******************:* .*********:*.***************
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV56 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV54 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV89 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV71 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV0 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV06 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV96 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV05 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV75 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV5 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV1 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_CH_FJZZ_9_2012_NA_AGK89917_1_2012_08_20_China_Swine_PEDV_M_AST13139_1_2015_09_China_Unknown_PEDV1 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQICIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV08 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV68 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV25 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV44 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV17 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV22 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQICIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV80 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV31 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV60 VNSIRLWRRTHSWWSFNPETDALLTTSVMGLQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV70 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV47 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV87 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_mutant2_M_AST13230_1_2015_09_China_Unknown_PEDV2 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV63 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV10 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV66 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV95 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV37 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV34 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV10 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV86 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV08 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV43 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV09 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV4 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV05 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV18 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV51 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV64 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_mutant1_M_AST13224_1_2015_09_China_Unknown_PEDV1 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV26 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV27 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV56 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV64 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV42 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV48 VNSIRLWRRTHSWWSFNPETNTLLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV38 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV60 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV06 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV02 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV6 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV28 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV50 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV66 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV12 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV40 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV26 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV52 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV62 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV72 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV18 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV78 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV3 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVRIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV76 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV74 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV78 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV24 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV03 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV02 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV00 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV86 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV84 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV30 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV47 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV62 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV24 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV98 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV90 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV36 VNSIWLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV91 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV22 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV48 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV10 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV96 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV42 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_M_AST13219_1_2013_05_China_Swine_PEDV35 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV82 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV72 VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS
**** ***************::******** *: ****************
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV56 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV54 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV89 GTLLVEGYKVATGVQVSQLPDFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV71 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV0 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV06 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV96 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV05 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV75 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV5 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV1 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_CH_FJZZ_9_2012_NA_AGK89917_1_2012_08_20_China_Swine_PEDV_M_AST13139_1_2015_09_China_Unknown_PEDV1 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV08 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV68 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV25 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV44 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV17 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV22 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV80 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV31 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV60 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV70 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV47 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV87 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_mutant2_M_AST13230_1_2015_09_China_Unknown_PEDV2 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV63 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV10 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV66 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV95 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV37 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV34 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV10 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV86 GTLLVEGYKVATGVQVSQLPDFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV08 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV43 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV09 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV4 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV05 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV18 GTLFVEGYKVATGVQVSQLPDFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV51 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV64 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_mutant1_M_AST13224_1_2015_09_China_Unknown_PEDV1 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV26 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV27 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV56 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV64 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV42 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV48 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV38 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV60 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV06 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV02 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV6 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV28 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV50 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV66 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV12 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV40 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV26 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV52 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV62 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV72 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV18 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV78 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV3 GTLFVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV76 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV74 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVPASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV78 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV24 GTLLVEGYKVATGVQVSQLPDFVTVAKATTTLVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV03 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV02 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV00 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV86 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV84 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV30 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV47 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV62 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV24 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV98 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV90 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV36 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV91 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV22 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV48 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV10 GTLFVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV96 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV42 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_M_AST13219_1_2013_05_China_Swine_PEDV35 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV82 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV72 GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA
***:****************:**********:********* ***.****
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV56 FYVRSKHGDYLAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV54 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV89 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV71 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV0 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV06 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV96 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV05 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV75 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV5 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV1 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_CH_FJZZ_9_2012_NA_AGK89917_1_2012_08_20_China_Swine_PEDV_M_AST13139_1_2015_09_China_Unknown_PEDV1 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV08 FYVRSKHGDYSVVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV68 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV25 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV44 FYVRSKHGDYSAVSNPRSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV17 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV22 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV80 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV31 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV60 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV70 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV47 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV87 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_mutant2_M_AST13230_1_2015_09_China_Unknown_PEDV2 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV63 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV10 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV66 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV95 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV37 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV34 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV10 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV86 FYVRSKHGDYSAVSNPSAVLTNSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV08 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV43 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV09 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV4 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV05 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV18 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV51 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV64 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_mutant1_M_AST13224_1_2015_09_China_Unknown_PEDV1 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV26 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV27 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV56 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV64 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV42 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV48 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV38 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV60 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV06 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV02 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV6 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV28 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV50 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV66 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV12 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
17GXCZ_1ORF3d_NA_QNL15258_1_2017_01_China_Swine_PEDV40 FYVRSKHGDYSAVSNPSSVITDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV26 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV52 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV62 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV72 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV18 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV78 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV3 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV76 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV74 FYVRSKHGDYSAVSNPSAVLTDSEIVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV78 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV24 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV03 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV02 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV00 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV86 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV84 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV30 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV47 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV62 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV24 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
15V010_BEL_2015_M_AK17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV4875_1_2015_01_Belgium_Swine_PEDV98 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV90 FYVRFKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV36 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV91 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV22 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV48 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV10 FYVRSKHGDYSAVSNPSSVLTDSEKVLHIV
17GXCZ_1ORF3c_NA_QNL15264_1_2017_01_China_Swine_PEDV96 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
13_019349_NA_AGS12452_1_2013_05_29_USA_Swine_PEDV42 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_M_AST13219_1_2013_05_China_Swine_PEDV35 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV82 FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
85_7_A40_M_AST13132_1_2015_09_China_Unknown_PEDV72 FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
**** ***** .**** :*:*:** ***:*
>GDS43_M_QCQ19915_1_2015_05_06_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTTAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGTTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTTAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS40_M_QCQ19969_1_2011_02_10_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGCTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >UNKNOWN_MT843279_NA_QMU85410_1_2013_02_China_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTGTCACTTTTTGATGCATGGGCTAGCTTCCAGGTCAACTGGGTCTTTTTCGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTATTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACTGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTGCCTGATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Minnesota309_2014_NA_AKJ22124_1_2014_04_17_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >CH_JX_1_2013_NA_AHF20048_1_2013_03_China_Swine_PEDV ATGTCTAACGGTTCTATTCCTGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Illinois201_2014_NA_AKJ21920_1_2014_03_07_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >IBR_1_JPN_2013_M_BAT33176_1_2013_11_Japan_Pig_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTTCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Illinois194_2014_NA_AKJ22040_1_2014_03_03_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Minnesota372_2014_NA_AKJ22196_1_2014_05_23_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACCACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >CH_SCCD_2014_M_AMR60836_1_2014_11_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >CAN_Quebec334_2014_NA_AKJ22136_1_2014_05_14_Canada_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTACGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >CH_SCZY44_2017_M_AZL47207_1_2017_09_09_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCACTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAACAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGATCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCTTCTGGCACTGGTTGGGCTTTCTATGTCCGGTCGAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >CO_P14_IC_M_ANY27040_1_2013_05_29_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTTAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGTTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GD_1_M_AFW99001_1_2011_12_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGCTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_1456_Zaragoza_Egea_de_los_Caballeros_M_QKV43736_1_2014_04_29_Spain_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATC------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGTCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGCTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS29_M_QCQ19891_1_2014_07_11_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGGTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS01_M_AKE53208_1_2012_11_10_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGCTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS07_M_QCQ19849_1_2014_03_12_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGATCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GER_L03209_2019_NA_CAC9433378_1_NA_NA_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTTTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_1526_Zaragoza_Tauste_M_QKV43772_1_2014_10_09_Spain_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATATTGTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >WHZHC72223_NA_APG77339_1_2014_China_Nematode_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTTCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTTAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCTACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Minnesota290_2014_NA_AKJ22058_1_2014_04_03_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Kansas432_2014_NA_AKJ21752_1_2014_10_31_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Minnesota61_2013_NA_AID57090_1_2013_11_18_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >CH_hubei_2016_NA_ART84253_1_2016_03_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCCCTTGTGTTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTTTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTTTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_GER_L00926_K20_4_01_2014_M_SNQ27896_1_NA_NA_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >ISU13_22038_IA_passage3_M_AHA38149_1_NA_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS52_M_QCQ20071_1_2017_02_25_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGCTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCCCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTTCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTTCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >IA1_M_AGY31031_1_2013_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGATCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_1931_1_Valladolid_Molpeceres_M_QKV43802_1_2017_01_19_Spain_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTTTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_1842_2016_ITA_M_AQY61722_1_2016_01_28_Italy_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATCCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCAGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Illinois260_2014_NA_AKJ21962_1_2014_03_14_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >HLJBY_NA_AKJ85726_1_NA_China_Swine_PEDV ATGTCTAACGGTTTTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTGTCACTTTTTAATGCATGGGCTAGCTTCCAGGTCAACTGGGTCTTTTTCGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTATTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACTGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTGCCTGATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAAATAGTGAGAAAGTGCTTCATTTAGTC >ISU13_22038_IA_homogenate_M_AHA38142_1_2013_06_06_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_2118_1_Orense_Covelas_M_QKV43826_1_2018_02_02_Spain_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >ISU13_22038_IA_passage9_M_AHA38156_1_NA_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >CH_GDZH02_1401_NA_AMS37103_1_2014_01_01_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTTAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >ISU13_19338E_IN_passage3_M_AHA38128_1_NA_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >JS2008_NA_AGG55743_1_2008_China_Swine_PEDV ATGTCTAACGGTTTTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTGTCACTTTTTGATGCATGGGCTAGCTTCCAGGTCAACTGGGTCTTTTTCGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTATTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACTGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGTTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTGCCTGATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_Belgorod_dom_2008_M_ASV51730_1_NA_Russia_Unknown_PEDV ATGTCTAACGATTCTATTCCCGTTGAAGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTCTTAGTGCTTCAGTATGGCCATTACAAGTACTCCGTGTTCTTGTATGGTGTCAAAATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTGTCACTTTTTGACGCATGGGCCAGCTTCCAGGTCAACTGGGTCTTTTTCGCTTTCAGCATCCTTATGGCCTGCATCACTCTTATGCTGTGGATAATGTATTTTGTCAATAGCATTCGCTTGTGGCGCAGGACACATTCCTGGTGGTCTTTTAATCCTGAAACTGATGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTATGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCGTCTGGCACTGGTTGGGCTTTCTATGTACGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Minnesota250_2014_NA_AKJ21806_1_2014_02_03_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >COL_Antioquia09796_2015_NA_QGQ60315_1_2015_07_30_Colombia_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACAATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAACGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >KB2013_4_NA_AQK38171_1_2013_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >KCH_1_JPN_2014_M_BAT33320_1_2014_03_Japan_Pig_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_GER_L00799_K11_14_01_2014_M_SNT95668_1_NA_NA_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS51_M_QCQ20047_1_2017_02_24_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTATTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTTTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Oklahoma418_2014_NA_AKJ21902_1_2014_09_26_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >KNU_1705_M_AWM11477_1_2017_12_South_Korea_Swine_PEDV ATGTCTAACGGTACTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAATACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCTGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGAACCCATTCTTGGTGGTCTTTCAATCCTGAAACAAACACGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >KNU_141112_S_DEL2_M_ASA40094_1_2016_01_South_Korea_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_GER_L00906_K16_14_01_2014_M_SNQ27994_1_NA_NA_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >COL_ValledelCauca_2015_NA_QGQ60297_1_2017_07_01_Colombia_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACAATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAACGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >ON_018_M_AIP84470_1_2014_02_04_Canada_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >CH_SCGA_2017_M_AZL47195_1_2017_01_05_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Iowa106_2013_NA_AID57030_1_2013_12_29_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACAATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAACGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >KNU_1709_M_AWM11495_1_2017_05_South_Korea_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_GER_L00927_K20_14_02_2014_M_SNQ27988_1_NA_NA_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >FJzz1_M_QAR17952_1_2011_05_22_China_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTTCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAACAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGCGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_YZ_NA_QED40662_1_2016_09_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTATCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS12_M_QCQ19951_1_2011_02_10_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGCTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Michigan189_2014_NA_AKJ21992_1_2014_02_17_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >KNU_1818_M_QBO24672_1_2018_04_South_Korea_Swine_PEDV ATGTCTAATGGTTCTATTCCCGTTGACGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCCGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACACTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_GER_L01011_K01_15_01_2015_M_SNQ27970_1_NA_NA_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >G2_HE2017_NA_QFG01691_1_2017_06_01_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCCTTTTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Minnesota408_2014_NA_AKJ22184_1_2014_08_28_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >CHM2013_NA_AJH76959_1_2013_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATTATGCTAGTACTTGAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTGTCACTTTTTGATGCATGGGCTAGCTTCCAGGTCAACTGGGTCTTTTTCGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTATTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACTGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCCGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGTTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTATTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Minnesota379_2014_NA_AKJ22142_1_2014_06_10_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >LZC_M_ABM64779_1_NA_China_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTGTCACTTTTTGACGCATCGCCTAGCTTCCAGGTCAACTGGGTCTTTTTCGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTATTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACTGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCCCGGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTATTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGATTGTGCTTCATTTAGTC >PEDV_GER_L01017_K01_15_07_2015_M_SNQ27927_1_NA_NA_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS09_M_QCQ20077_1_2014_08_01_China_Swine_PEDV ATGTCTAACGGTTTTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTGTCACTTTTTAATGCATGGGCTAGCTTCCAGGTCAACTGGGTCTTTTTCGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTATTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACTGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTGCCTGATTTCGTCACAGTCGCCAAGGCCACTACAACACTTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >COL_ValledelCauca05761_2015_NA_QGQ60267_1_2015_05_08_Colombia_Swine_PEDV ATGTCTAACGATTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Illinois176_2014_NA_AKJ21728_1_2014_01_03_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Minnesota84_2013_NA_AID57102_1_2013_12_03_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGTTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTTTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >NIG_1_JPN_2014_M_BAT33236_1_2014_04_Japan_Pig_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_GER_L01060_K07_15_02_2015_M_SNQ27915_1_NA_NA_Unknown_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS16_M_QCQ19945_1_2011_05_25_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------GAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTTTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTATGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTAGCACTGGTTGGGCTTTCTATGTCCGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >KNU_1704_M_AWM11471_1_2017_11_South_Korea_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATAGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Minnesota212_2014_NA_AKJ21908_1_2014_02_13_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACCACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_NorthCarolina91_2013_NA_AID56958_1_2013_12_08_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >OH9097_14_M_ALM31947_1_2014_10_19_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PEDV_LNsy_M_ATG31103_1_2015_03_02_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTTCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS23_M_AWV57057_1_2012_11_05_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTATAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTTGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTACTTCATTTAGTC >PEDV_LS_M_AJP67447_1_2014_01_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_NorthCarolina66_2013_NA_AID56832_1_2013_11_23_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Tennesse56_2013_NA_AID56784_1_2013_11_04_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >PC22A_P160_NA_APX42140_1_2015_10_01_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGTTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATATAGTC >PEDV_MEX_JAL_01_2017_NA_AVU05371_1_2017_02_10_Mexico_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGGTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTTTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATCGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >GDS28_M_QCQ19861_1_2012_12_13_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >USA_Iowa_16465_2013_NA_AHC03505_1_2013_04_29_USA_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >virulent_DR13_NA_AFE85965_1_2009_South_Korea_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGTGCTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTGGCACTGTCACTCTTTGACGCATGGGCTAGCTTTCAGGTCAACTGGGTCTTTTTCGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTCAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGTATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTACGGTCAAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTGCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC >YN90_NA_ALM09385_1_2014_05_10_China_Swine_PEDV ATGTCTAACGGTTCTATTCCCGTTGATGAGGTGATT------------CAACACCTTAGAAACTGGAATTTCACATGGAATATCATACTGACGATACTACTTGTAGTGCTTCAGTATGGCCATTACAAGTACTCTGCGTTCTTGTATGGTGTCAAGATGGCTATTCTATGGATACTTTGGCCTCTTGTGTTAGCACTGTCACTTTTTGATGCATGGGCTAGCTTTCAGGTCAATTGGGTCTTTTTTGCTTTCAGCATCCTTATGGCTTGCATCACTCTTATGCTGTGGATAATGTACTTTGTCAATAGCATTCGGTTGTGGCGCAGGACACATTCTTGGTGGTCTTTTAATCCTGAAACAGACGCGCTTCTCACTACTTCTGTGATGGGCCGACAGGTCTGCATTCCAGTGCTTGGAGCACCAACTGGTGTAACGCTAACACTCCTTAGTGGTACATTGCTTGTAGAGGGCTATAAGGTTGCTACTGGCGTACAGGTAAGTCAATTACCTAATTTCGTCACAGTCGCCAAGGCCACTACAACAATTGTCTACGGACGTGTTGGTCGTTCAGTCAATGCTTCATCTGGCACTGGTTGGGCTTTCTATGTCCGGTCCAAACACGGCGACTACTCAGCTGTGAGTAATCCGAGTTCGGTTCTCACAGATAGTGAGAAAGTGCTTCATTTAGTC
>GDS43_M_QCQ19915_1_2015_05_06_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYLAVSNPSSVLTDSEKVLHLV >GDS40_M_QCQ19969_1_2011_02_10_China_Swine_PEDV MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >UNKNOWN_MT843279_NA_QMU85410_1_2013_02_China_Unknown_PEDV MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPDFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >USA_Minnesota309_2014_NA_AKJ22124_1_2014_04_17_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >CH_JX_1_2013_NA_AHF20048_1_2013_03_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Illinois201_2014_NA_AKJ21920_1_2014_03_07_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >IBR_1_JPN_2013_M_BAT33176_1_2013_11_Japan_Pig_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFSFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Illinois194_2014_NA_AKJ22040_1_2014_03_03_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Minnesota372_2014_NA_AKJ22196_1_2014_05_23_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >CH_SCCD_2014_M_AMR60836_1_2014_11_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >CAN_Quebec334_2014_NA_AKJ22136_1_2014_05_14_Canada_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >CH_SCZY44_2017_M_AZL47207_1_2017_09_09_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQICIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >CO_P14_IC_M_ANY27040_1_2013_05_29_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSVVSNPSSVLTDSEKVLHLV >GD_1_M_AFW99001_1_2011_12_China_Swine_PEDV MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >PEDV_1456_Zaragoza_Egea_de_los_Caballeros_M_QKV43736_1_2014_04_29_Spain_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >GDS29_M_QCQ19891_1_2014_07_11_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPRSVLTDSEKVLHLV >GDS01_M_AKE53208_1_2012_11_10_China_Swine_PEDV MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >GDS07_M_QCQ19849_1_2014_03_12_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQICIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >GER_L03209_2019_NA_CAC9433378_1_NA_NA_Unknown_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_1526_Zaragoza_Tauste_M_QKV43772_1_2014_10_09_Spain_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >WHZHC72223_NA_APG77339_1_2014_China_Nematode_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFSFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGLQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Minnesota290_2014_NA_AKJ22058_1_2014_04_03_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Kansas432_2014_NA_AKJ21752_1_2014_10_31_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Minnesota61_2013_NA_AID57090_1_2013_11_18_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >CH_hubei_2016_NA_ART84253_1_2016_03_China_Swine_PEDV MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >PEDV_GER_L00926_K20_4_01_2014_M_SNQ27896_1_NA_NA_Unknown_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >ISU13_22038_IA_passage3_M_AHA38149_1_NA_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >GDS52_M_QCQ20071_1_2017_02_25_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVLLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFSFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >IA1_M_AGY31031_1_2013_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_1931_1_Valladolid_Molpeceres_M_QKV43802_1_2017_01_19_Spain_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_1842_2016_ITA_M_AQY61722_1_2016_01_28_Italy_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Illinois260_2014_NA_AKJ21962_1_2014_03_14_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >HLJBY_NA_AKJ85726_1_NA_China_Swine_PEDV MSNGFIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG VKMAILWILWPLVLALSLFNAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPDFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSAVLTNSEKVLHLV >ISU13_22038_IA_homogenate_M_AHA38142_1_2013_06_06_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_2118_1_Orense_Covelas_M_QKV43826_1_2018_02_02_Spain_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >ISU13_22038_IA_passage9_M_AHA38156_1_NA_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >CH_GDZH02_1401_NA_AMS37103_1_2014_01_01_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >ISU13_19338E_IN_passage3_M_AHA38128_1_NA_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >JS2008_NA_AGG55743_1_2008_China_Swine_PEDV MSNGFIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLFVEGYKVATGVQVSQLPDFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >PEDV_Belgorod_dom_2008_M_ASV51730_1_NA_Russia_Unknown_PEDV MSNDSIPVEEVI----QHLRNWNFTWNIILTILLLVLQYGHYKYSVFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >USA_Minnesota250_2014_NA_AKJ21806_1_2014_02_03_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >COL_Antioquia09796_2015_NA_QGQ60315_1_2015_07_30_Colombia_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >KB2013_4_NA_AQK38171_1_2013_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >KCH_1_JPN_2014_M_BAT33320_1_2014_03_Japan_Pig_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_GER_L00799_K11_14_01_2014_M_SNT95668_1_NA_NA_Unknown_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >GDS51_M_QCQ20047_1_2017_02_24_China_Swine_PEDV MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >USA_Oklahoma418_2014_NA_AKJ21902_1_2014_09_26_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >KNU_1705_M_AWM11477_1_2017_12_South_Korea_Swine_PEDV MSNGTIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFCILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETNTLLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >KNU_141112_S_DEL2_M_ASA40094_1_2016_01_South_Korea_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_GER_L00906_K16_14_01_2014_M_SNQ27994_1_NA_NA_Unknown_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >COL_ValledelCauca_2015_NA_QGQ60297_1_2017_07_01_Colombia_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >ON_018_M_AIP84470_1_2014_02_04_Canada_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >CH_SCGA_2017_M_AZL47195_1_2017_01_05_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Iowa106_2013_NA_AID57030_1_2013_12_29_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >KNU_1709_M_AWM11495_1_2017_05_South_Korea_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_GER_L00927_K20_14_02_2014_M_SNQ27988_1_NA_NA_Unknown_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >FJzz1_M_QAR17952_1_2011_05_22_China_Unknown_PEDV MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFSFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >PEDV_YZ_NA_QED40662_1_2016_09_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVITDSEKVLHLV >GDS12_M_QCQ19951_1_2011_02_10_China_Swine_PEDV MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >USA_Michigan189_2014_NA_AKJ21992_1_2014_02_17_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >KNU_1818_M_QBO24672_1_2018_04_South_Korea_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_GER_L01011_K01_15_01_2015_M_SNQ27970_1_NA_NA_Unknown_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >G2_HE2017_NA_QFG01691_1_2017_06_01_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Minnesota408_2014_NA_AKJ22184_1_2014_08_28_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >CHM2013_NA_AJH76959_1_2013_China_Swine_PEDV MSNGSIPVDEVIMLVLEHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVRIPVLGAPTGVTLTLLS GTLFVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >USA_Minnesota379_2014_NA_AKJ22142_1_2014_06_10_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >LZC_M_ABM64779_1_NA_China_Unknown_PEDV MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG VKMAILWILWPLVLALSLFDASPSFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVPASSGTGWA FYVRSKHGDYSAVSNPSAVLTDSEIVLHLV >PEDV_GER_L01017_K01_15_07_2015_M_SNQ27927_1_NA_NA_Unknown_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >GDS09_M_QCQ20077_1_2014_08_01_China_Swine_PEDV MSNGFIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYG VKMAILWILWPLVLALSLFNAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPDFVTVAKATTTLVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >COL_ValledelCauca05761_2015_NA_QGQ60267_1_2015_05_08_Colombia_Swine_PEDV MSNDSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Illinois176_2014_NA_AKJ21728_1_2014_01_03_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Minnesota84_2013_NA_AID57102_1_2013_12_03_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >NIG_1_JPN_2014_M_BAT33236_1_2014_04_Japan_Pig_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_GER_L01060_K07_15_02_2015_M_SNQ27915_1_NA_NA_Unknown_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >GDS16_M_QCQ19945_1_2011_05_25_China_Swine_PEDV MSNGSIPVDEVI----EHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSSTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >KNU_1704_M_AWM11471_1_2017_11_South_Korea_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Minnesota212_2014_NA_AKJ21908_1_2014_02_13_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_NorthCarolina91_2013_NA_AID56958_1_2013_12_08_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >OH9097_14_M_ALM31947_1_2014_10_19_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_LNsy_M_ATG31103_1_2015_03_02_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRFKHGDYSAVSNPSSVLTDSEKVLHLV >GDS23_M_AWV57057_1_2012_11_05_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIWLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PEDV_LS_M_AJP67447_1_2014_01_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_NorthCarolina66_2013_NA_AID56832_1_2013_11_23_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Tennesse56_2013_NA_AID56784_1_2013_11_04_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >PC22A_P160_NA_APX42140_1_2015_10_01_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLFVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHIV >PEDV_MEX_JAL_01_2017_NA_AVU05371_1_2017_02_10_Mexico_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVVLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >GDS28_M_QCQ19861_1_2012_12_13_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >USA_Iowa_16465_2013_NA_AHC03505_1_2013_04_29_USA_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV >virulent_DR13_NA_AFE85965_1_2009_South_Korea_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSVLLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSAVLTDSEKVLHLV >YN90_NA_ALM09385_1_2014_05_10_China_Swine_PEDV MSNGSIPVDEVI----QHLRNWNFTWNIILTILLVVLQYGHYKYSAFLYG VKMAILWILWPLVLALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYF VNSIRLWRRTHSWWSFNPETDALLTTSVMGRQVCIPVLGAPTGVTLTLLS GTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVYGRVGRSVNASSGTGWA FYVRSKHGDYSAVSNPSSVLTDSEKVLHLV
Reading sequence file /data//pss_subsets/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result/original_alignment/fubar/fasta/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1
Found 90 sequences of length 690
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 0.9%
Found 36 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 4
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 61 polymorphic sites
**p-Value(s)**
----------
NSS: 6.12e-01 (1000 permutations)
Max Chi^2: 3.30e-02 (1000 permutations)
PHI (Permutation): 1.45e-01 (1000 permutations)
PHI (Normal): 1.18e-01
#NEXUS
[ID: 0148841716]
begin taxa;
dimensions ntax=90;
taxlabels
GDS43_M_QCQ19915_1_2015_05_06_China_Swine_PEDV
CH_SCCD_2014_M_AMR60836_1_2014_11_China_Swine_PEDV
CAN_Quebec334_2014_NA_AKJ22136_1_2014_05_14_Canada_Swine_PEDV
CH_SCZY44_2017_M_AZL47207_1_2017_09_09_China_Swine_PEDV
CO_P14_IC_M_ANY27040_1_2013_05_29_USA_Swine_PEDV
GD_1_M_AFW99001_1_2011_12_China_Swine_PEDV
PEDV_1456_Zaragoza_Egea_de_los_Caballeros_M_QKV43736_1_2014_04_29_Spain_Swine_PEDV
GDS29_M_QCQ19891_1_2014_07_11_China_Swine_PEDV
GDS01_M_AKE53208_1_2012_11_10_China_Swine_PEDV
GDS07_M_QCQ19849_1_2014_03_12_China_Swine_PEDV
GER_L03209_2019_NA_CAC9433378_1_NA_NA_Unknown_PEDV
GDS40_M_QCQ19969_1_2011_02_10_China_Swine_PEDV
PEDV_1526_Zaragoza_Tauste_M_QKV43772_1_2014_10_09_Spain_Swine_PEDV
WHZHC72223_NA_APG77339_1_2014_China_Nematode_PEDV
USA_Minnesota290_2014_NA_AKJ22058_1_2014_04_03_USA_Swine_PEDV
USA_Kansas432_2014_NA_AKJ21752_1_2014_10_31_USA_Swine_PEDV
USA_Minnesota61_2013_NA_AID57090_1_2013_11_18_USA_Swine_PEDV
CH_hubei_2016_NA_ART84253_1_2016_03_China_Swine_PEDV
PEDV_GER_L00926_K20_4_01_2014_M_SNQ27896_1_NA_NA_Unknown_PEDV
ISU13_22038_IA_passage3_M_AHA38149_1_NA_USA_Swine_PEDV
GDS52_M_QCQ20071_1_2017_02_25_China_Swine_PEDV
IA1_M_AGY31031_1_2013_USA_Swine_PEDV
UNKNOWN_MT843279_NA_QMU85410_1_2013_02_China_Unknown_PEDV
PEDV_1931_1_Valladolid_Molpeceres_M_QKV43802_1_2017_01_19_Spain_Swine_PEDV
PEDV_1842_2016_ITA_M_AQY61722_1_2016_01_28_Italy_Swine_PEDV
USA_Illinois260_2014_NA_AKJ21962_1_2014_03_14_USA_Swine_PEDV
HLJBY_NA_AKJ85726_1_NA_China_Swine_PEDV
ISU13_22038_IA_homogenate_M_AHA38142_1_2013_06_06_USA_Swine_PEDV
PEDV_2118_1_Orense_Covelas_M_QKV43826_1_2018_02_02_Spain_Swine_PEDV
ISU13_22038_IA_passage9_M_AHA38156_1_NA_USA_Swine_PEDV
CH_GDZH02_1401_NA_AMS37103_1_2014_01_01_China_Swine_PEDV
ISU13_19338E_IN_passage3_M_AHA38128_1_NA_USA_Swine_PEDV
JS2008_NA_AGG55743_1_2008_China_Swine_PEDV
USA_Minnesota309_2014_NA_AKJ22124_1_2014_04_17_USA_Swine_PEDV
PEDV_Belgorod_dom_2008_M_ASV51730_1_NA_Russia_Unknown_PEDV
USA_Minnesota250_2014_NA_AKJ21806_1_2014_02_03_USA_Swine_PEDV
COL_Antioquia09796_2015_NA_QGQ60315_1_2015_07_30_Colombia_Swine_PEDV
KB2013_4_NA_AQK38171_1_2013_China_Swine_PEDV
KCH_1_JPN_2014_M_BAT33320_1_2014_03_Japan_Pig_PEDV
PEDV_GER_L00799_K11_14_01_2014_M_SNT95668_1_NA_NA_Unknown_PEDV
GDS51_M_QCQ20047_1_2017_02_24_China_Swine_PEDV
USA_Oklahoma418_2014_NA_AKJ21902_1_2014_09_26_USA_Swine_PEDV
KNU_1705_M_AWM11477_1_2017_12_South_Korea_Swine_PEDV
KNU_141112_S_DEL2_M_ASA40094_1_2016_01_South_Korea_Swine_PEDV
CH_JX_1_2013_NA_AHF20048_1_2013_03_China_Swine_PEDV
PEDV_GER_L00906_K16_14_01_2014_M_SNQ27994_1_NA_NA_Unknown_PEDV
COL_ValledelCauca_2015_NA_QGQ60297_1_2017_07_01_Colombia_Swine_PEDV
ON_018_M_AIP84470_1_2014_02_04_Canada_Swine_PEDV
CH_SCGA_2017_M_AZL47195_1_2017_01_05_China_Swine_PEDV
USA_Iowa106_2013_NA_AID57030_1_2013_12_29_USA_Swine_PEDV
KNU_1709_M_AWM11495_1_2017_05_South_Korea_Swine_PEDV
PEDV_GER_L00927_K20_14_02_2014_M_SNQ27988_1_NA_NA_Unknown_PEDV
FJzz1_M_QAR17952_1_2011_05_22_China_Unknown_PEDV
PEDV_YZ_NA_QED40662_1_2016_09_China_Swine_PEDV
GDS12_M_QCQ19951_1_2011_02_10_China_Swine_PEDV
USA_Illinois201_2014_NA_AKJ21920_1_2014_03_07_USA_Swine_PEDV
USA_Michigan189_2014_NA_AKJ21992_1_2014_02_17_USA_Swine_PEDV
KNU_1818_M_QBO24672_1_2018_04_South_Korea_Swine_PEDV
PEDV_GER_L01011_K01_15_01_2015_M_SNQ27970_1_NA_NA_Unknown_PEDV
G2_HE2017_NA_QFG01691_1_2017_06_01_China_Swine_PEDV
USA_Minnesota408_2014_NA_AKJ22184_1_2014_08_28_USA_Swine_PEDV
CHM2013_NA_AJH76959_1_2013_China_Swine_PEDV
USA_Minnesota379_2014_NA_AKJ22142_1_2014_06_10_USA_Swine_PEDV
LZC_M_ABM64779_1_NA_China_Unknown_PEDV
PEDV_GER_L01017_K01_15_07_2015_M_SNQ27927_1_NA_NA_Unknown_PEDV
GDS09_M_QCQ20077_1_2014_08_01_China_Swine_PEDV
IBR_1_JPN_2013_M_BAT33176_1_2013_11_Japan_Pig_PEDV
COL_ValledelCauca05761_2015_NA_QGQ60267_1_2015_05_08_Colombia_Swine_PEDV
USA_Illinois176_2014_NA_AKJ21728_1_2014_01_03_USA_Swine_PEDV
USA_Minnesota84_2013_NA_AID57102_1_2013_12_03_USA_Swine_PEDV
NIG_1_JPN_2014_M_BAT33236_1_2014_04_Japan_Pig_PEDV
PEDV_GER_L01060_K07_15_02_2015_M_SNQ27915_1_NA_NA_Unknown_PEDV
GDS16_M_QCQ19945_1_2011_05_25_China_Swine_PEDV
KNU_1704_M_AWM11471_1_2017_11_South_Korea_Swine_PEDV
USA_Minnesota212_2014_NA_AKJ21908_1_2014_02_13_USA_Swine_PEDV
USA_NorthCarolina91_2013_NA_AID56958_1_2013_12_08_USA_Swine_PEDV
OH9097_14_M_ALM31947_1_2014_10_19_USA_Swine_PEDV
USA_Illinois194_2014_NA_AKJ22040_1_2014_03_03_USA_Swine_PEDV
PEDV_LNsy_M_ATG31103_1_2015_03_02_China_Swine_PEDV
GDS23_M_AWV57057_1_2012_11_05_China_Swine_PEDV
PEDV_LS_M_AJP67447_1_2014_01_China_Swine_PEDV
USA_NorthCarolina66_2013_NA_AID56832_1_2013_11_23_USA_Swine_PEDV
USA_Tennesse56_2013_NA_AID56784_1_2013_11_04_USA_Swine_PEDV
PC22A_P160_NA_APX42140_1_2015_10_01_USA_Swine_PEDV
PEDV_MEX_JAL_01_2017_NA_AVU05371_1_2017_02_10_Mexico_Swine_PEDV
GDS28_M_QCQ19861_1_2012_12_13_China_Swine_PEDV
USA_Iowa_16465_2013_NA_AHC03505_1_2013_04_29_USA_Swine_PEDV
virulent_DR13_NA_AFE85965_1_2009_South_Korea_Swine_PEDV
USA_Minnesota372_2014_NA_AKJ22196_1_2014_05_23_USA_Swine_PEDV
YN90_NA_ALM09385_1_2014_05_10_China_Swine_PEDV
;
end;
begin trees;
translate
1 GDS43_M_QCQ19915_1_2015_05_06_China_Swine_PEDV,
2 CH_SCCD_2014_M_AMR60836_1_2014_11_China_Swine_PEDV,
3 CAN_Quebec334_2014_NA_AKJ22136_1_2014_05_14_Canada_Swine_PEDV,
4 CH_SCZY44_2017_M_AZL47207_1_2017_09_09_China_Swine_PEDV,
5 CO_P14_IC_M_ANY27040_1_2013_05_29_USA_Swine_PEDV,
6 GD_1_M_AFW99001_1_2011_12_China_Swine_PEDV,
7 PEDV_1456_Zaragoza_Egea_de_los_Caballeros_M_QKV43736_1_2014_04_29_Spain_Swine_PEDV,
8 GDS29_M_QCQ19891_1_2014_07_11_China_Swine_PEDV,
9 GDS01_M_AKE53208_1_2012_11_10_China_Swine_PEDV,
10 GDS07_M_QCQ19849_1_2014_03_12_China_Swine_PEDV,
11 GER_L03209_2019_NA_CAC9433378_1_NA_NA_Unknown_PEDV,
12 GDS40_M_QCQ19969_1_2011_02_10_China_Swine_PEDV,
13 PEDV_1526_Zaragoza_Tauste_M_QKV43772_1_2014_10_09_Spain_Swine_PEDV,
14 WHZHC72223_NA_APG77339_1_2014_China_Nematode_PEDV,
15 USA_Minnesota290_2014_NA_AKJ22058_1_2014_04_03_USA_Swine_PEDV,
16 USA_Kansas432_2014_NA_AKJ21752_1_2014_10_31_USA_Swine_PEDV,
17 USA_Minnesota61_2013_NA_AID57090_1_2013_11_18_USA_Swine_PEDV,
18 CH_hubei_2016_NA_ART84253_1_2016_03_China_Swine_PEDV,
19 PEDV_GER_L00926_K20_4_01_2014_M_SNQ27896_1_NA_NA_Unknown_PEDV,
20 ISU13_22038_IA_passage3_M_AHA38149_1_NA_USA_Swine_PEDV,
21 GDS52_M_QCQ20071_1_2017_02_25_China_Swine_PEDV,
22 IA1_M_AGY31031_1_2013_USA_Swine_PEDV,
23 UNKNOWN_MT843279_NA_QMU85410_1_2013_02_China_Unknown_PEDV,
24 PEDV_1931_1_Valladolid_Molpeceres_M_QKV43802_1_2017_01_19_Spain_Swine_PEDV,
25 PEDV_1842_2016_ITA_M_AQY61722_1_2016_01_28_Italy_Swine_PEDV,
26 USA_Illinois260_2014_NA_AKJ21962_1_2014_03_14_USA_Swine_PEDV,
27 HLJBY_NA_AKJ85726_1_NA_China_Swine_PEDV,
28 ISU13_22038_IA_homogenate_M_AHA38142_1_2013_06_06_USA_Swine_PEDV,
29 PEDV_2118_1_Orense_Covelas_M_QKV43826_1_2018_02_02_Spain_Swine_PEDV,
30 ISU13_22038_IA_passage9_M_AHA38156_1_NA_USA_Swine_PEDV,
31 CH_GDZH02_1401_NA_AMS37103_1_2014_01_01_China_Swine_PEDV,
32 ISU13_19338E_IN_passage3_M_AHA38128_1_NA_USA_Swine_PEDV,
33 JS2008_NA_AGG55743_1_2008_China_Swine_PEDV,
34 USA_Minnesota309_2014_NA_AKJ22124_1_2014_04_17_USA_Swine_PEDV,
35 PEDV_Belgorod_dom_2008_M_ASV51730_1_NA_Russia_Unknown_PEDV,
36 USA_Minnesota250_2014_NA_AKJ21806_1_2014_02_03_USA_Swine_PEDV,
37 COL_Antioquia09796_2015_NA_QGQ60315_1_2015_07_30_Colombia_Swine_PEDV,
38 KB2013_4_NA_AQK38171_1_2013_China_Swine_PEDV,
39 KCH_1_JPN_2014_M_BAT33320_1_2014_03_Japan_Pig_PEDV,
40 PEDV_GER_L00799_K11_14_01_2014_M_SNT95668_1_NA_NA_Unknown_PEDV,
41 GDS51_M_QCQ20047_1_2017_02_24_China_Swine_PEDV,
42 USA_Oklahoma418_2014_NA_AKJ21902_1_2014_09_26_USA_Swine_PEDV,
43 KNU_1705_M_AWM11477_1_2017_12_South_Korea_Swine_PEDV,
44 KNU_141112_S_DEL2_M_ASA40094_1_2016_01_South_Korea_Swine_PEDV,
45 CH_JX_1_2013_NA_AHF20048_1_2013_03_China_Swine_PEDV,
46 PEDV_GER_L00906_K16_14_01_2014_M_SNQ27994_1_NA_NA_Unknown_PEDV,
47 COL_ValledelCauca_2015_NA_QGQ60297_1_2017_07_01_Colombia_Swine_PEDV,
48 ON_018_M_AIP84470_1_2014_02_04_Canada_Swine_PEDV,
49 CH_SCGA_2017_M_AZL47195_1_2017_01_05_China_Swine_PEDV,
50 USA_Iowa106_2013_NA_AID57030_1_2013_12_29_USA_Swine_PEDV,
51 KNU_1709_M_AWM11495_1_2017_05_South_Korea_Swine_PEDV,
52 PEDV_GER_L00927_K20_14_02_2014_M_SNQ27988_1_NA_NA_Unknown_PEDV,
53 FJzz1_M_QAR17952_1_2011_05_22_China_Unknown_PEDV,
54 PEDV_YZ_NA_QED40662_1_2016_09_China_Swine_PEDV,
55 GDS12_M_QCQ19951_1_2011_02_10_China_Swine_PEDV,
56 USA_Illinois201_2014_NA_AKJ21920_1_2014_03_07_USA_Swine_PEDV,
57 USA_Michigan189_2014_NA_AKJ21992_1_2014_02_17_USA_Swine_PEDV,
58 KNU_1818_M_QBO24672_1_2018_04_South_Korea_Swine_PEDV,
59 PEDV_GER_L01011_K01_15_01_2015_M_SNQ27970_1_NA_NA_Unknown_PEDV,
60 G2_HE2017_NA_QFG01691_1_2017_06_01_China_Swine_PEDV,
61 USA_Minnesota408_2014_NA_AKJ22184_1_2014_08_28_USA_Swine_PEDV,
62 CHM2013_NA_AJH76959_1_2013_China_Swine_PEDV,
63 USA_Minnesota379_2014_NA_AKJ22142_1_2014_06_10_USA_Swine_PEDV,
64 LZC_M_ABM64779_1_NA_China_Unknown_PEDV,
65 PEDV_GER_L01017_K01_15_07_2015_M_SNQ27927_1_NA_NA_Unknown_PEDV,
66 GDS09_M_QCQ20077_1_2014_08_01_China_Swine_PEDV,
67 IBR_1_JPN_2013_M_BAT33176_1_2013_11_Japan_Pig_PEDV,
68 COL_ValledelCauca05761_2015_NA_QGQ60267_1_2015_05_08_Colombia_Swine_PEDV,
69 USA_Illinois176_2014_NA_AKJ21728_1_2014_01_03_USA_Swine_PEDV,
70 USA_Minnesota84_2013_NA_AID57102_1_2013_12_03_USA_Swine_PEDV,
71 NIG_1_JPN_2014_M_BAT33236_1_2014_04_Japan_Pig_PEDV,
72 PEDV_GER_L01060_K07_15_02_2015_M_SNQ27915_1_NA_NA_Unknown_PEDV,
73 GDS16_M_QCQ19945_1_2011_05_25_China_Swine_PEDV,
74 KNU_1704_M_AWM11471_1_2017_11_South_Korea_Swine_PEDV,
75 USA_Minnesota212_2014_NA_AKJ21908_1_2014_02_13_USA_Swine_PEDV,
76 USA_NorthCarolina91_2013_NA_AID56958_1_2013_12_08_USA_Swine_PEDV,
77 OH9097_14_M_ALM31947_1_2014_10_19_USA_Swine_PEDV,
78 USA_Illinois194_2014_NA_AKJ22040_1_2014_03_03_USA_Swine_PEDV,
79 PEDV_LNsy_M_ATG31103_1_2015_03_02_China_Swine_PEDV,
80 GDS23_M_AWV57057_1_2012_11_05_China_Swine_PEDV,
81 PEDV_LS_M_AJP67447_1_2014_01_China_Swine_PEDV,
82 USA_NorthCarolina66_2013_NA_AID56832_1_2013_11_23_USA_Swine_PEDV,
83 USA_Tennesse56_2013_NA_AID56784_1_2013_11_04_USA_Swine_PEDV,
84 PC22A_P160_NA_APX42140_1_2015_10_01_USA_Swine_PEDV,
85 PEDV_MEX_JAL_01_2017_NA_AVU05371_1_2017_02_10_Mexico_Swine_PEDV,
86 GDS28_M_QCQ19861_1_2012_12_13_China_Swine_PEDV,
87 USA_Iowa_16465_2013_NA_AHC03505_1_2013_04_29_USA_Swine_PEDV,
88 virulent_DR13_NA_AFE85965_1_2009_South_Korea_Swine_PEDV,
89 USA_Minnesota372_2014_NA_AKJ22196_1_2014_05_23_USA_Swine_PEDV,
90 YN90_NA_ALM09385_1_2014_05_10_China_Swine_PEDV
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:2.402977e-03,2:5.390505e-04,3:1.238172e-03,4:4.660763e-03,5:1.723875e-03,7:2.928650e-03,8:1.197889e-03,10:8.877130e-04,13:2.063945e-03,15:4.700450e-04,16:5.255386e-04,17:5.435892e-04,19:5.113243e-04,20:4.987632e-04,22:1.189762e-03,25:2.012052e-03,26:5.422963e-04,28:5.160044e-04,29:4.828641e-04,30:5.207279e-04,31:1.206984e-03,32:5.444589e-04,34:5.153648e-04,36:5.404210e-04,38:5.062293e-04,39:5.464168e-04,40:5.079312e-04,42:5.399139e-04,43:5.964022e-03,44:5.198074e-04,45:1.193085e-03,46:4.878142e-04,48:4.920917e-04,49:5.539321e-04,51:5.481186e-04,52:4.941919e-04,54:1.285496e-03,56:5.314628e-04,57:5.029705e-04,58:3.556533e-03,59:5.407702e-04,61:5.249856e-04,63:5.010946e-04,65:5.467212e-04,68:1.299771e-03,69:5.104120e-04,71:5.369980e-04,72:4.980968e-04,74:1.276757e-03,76:5.052135e-04,77:5.347479e-04,78:5.020687e-04,79:1.232139e-03,80:2.780962e-03,81:5.225258e-04,82:5.483297e-04,83:5.121391e-04,84:1.931332e-03,85:3.551454e-03,86:4.995951e-04,87:5.212107e-04,90:1.180697e-03,(37:1.333874e-03,47:5.369701e-04,50:5.570135e-04)0.999:1.920044e-03,((((6:5.335359e-04,9:5.255079e-04,12:5.244658e-04,55:5.169822e-04)0.918:1.283944e-03,(18:2.794613e-03,41:1.484470e-03)0.593:1.285929e-03,53:2.765354e-03,73:4.804162e-04)0.996:3.089710e-03,((((23:5.488045e-04,((27:1.280346e-03,66:1.282726e-03)0.987:1.252699e-03,33:1.317843e-03)0.953:1.290571e-03)1.000:2.811323e-03,(62:2.184930e-03,64:6.692178e-03)0.759:1.278197e-03)0.764:1.452909e-03,35:1.298694e-02)0.912:3.009356e-03,88:4.074724e-03)0.765:2.460753e-03)0.859:2.283744e-03,21:5.010389e-03)0.992:2.808227e-03,(75:5.925092e-04,89:5.978218e-04)0.841:1.327788e-03,(14:2.958358e-03,67:7.483084e-04)0.610:1.285129e-03,(11:5.791072e-04,24:5.630154e-04,60:2.119061e-03,70:1.305089e-03)0.518:1.161488e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:2.402977e-03,2:5.390505e-04,3:1.238172e-03,4:4.660763e-03,5:1.723875e-03,7:2.928650e-03,8:1.197889e-03,10:8.877130e-04,13:2.063945e-03,15:4.700450e-04,16:5.255386e-04,17:5.435892e-04,19:5.113243e-04,20:4.987632e-04,22:1.189762e-03,25:2.012052e-03,26:5.422963e-04,28:5.160044e-04,29:4.828641e-04,30:5.207279e-04,31:1.206984e-03,32:5.444589e-04,34:5.153648e-04,36:5.404210e-04,38:5.062293e-04,39:5.464168e-04,40:5.079312e-04,42:5.399139e-04,43:5.964022e-03,44:5.198074e-04,45:1.193085e-03,46:4.878142e-04,48:4.920917e-04,49:5.539321e-04,51:5.481186e-04,52:4.941919e-04,54:1.285496e-03,56:5.314628e-04,57:5.029705e-04,58:3.556533e-03,59:5.407702e-04,61:5.249856e-04,63:5.010946e-04,65:5.467212e-04,68:1.299771e-03,69:5.104120e-04,71:5.369980e-04,72:4.980968e-04,74:1.276757e-03,76:5.052135e-04,77:5.347479e-04,78:5.020687e-04,79:1.232139e-03,80:2.780962e-03,81:5.225258e-04,82:5.483297e-04,83:5.121391e-04,84:1.931332e-03,85:3.551454e-03,86:4.995951e-04,87:5.212107e-04,90:1.180697e-03,(37:1.333874e-03,47:5.369701e-04,50:5.570135e-04):1.920044e-03,((((6:5.335359e-04,9:5.255079e-04,12:5.244658e-04,55:5.169822e-04):1.283944e-03,(18:2.794613e-03,41:1.484470e-03):1.285929e-03,53:2.765354e-03,73:4.804162e-04):3.089710e-03,((((23:5.488045e-04,((27:1.280346e-03,66:1.282726e-03):1.252699e-03,33:1.317843e-03):1.290571e-03):2.811323e-03,(62:2.184930e-03,64:6.692178e-03):1.278197e-03):1.452909e-03,35:1.298694e-02):3.009356e-03,88:4.074724e-03):2.460753e-03):2.283744e-03,21:5.010389e-03):2.808227e-03,(75:5.925092e-04,89:5.978218e-04):1.327788e-03,(14:2.958358e-03,67:7.483084e-04):1.285129e-03,(11:5.791072e-04,24:5.630154e-04,60:2.119061e-03,70:1.305089e-03):1.161488e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1300.41 -1319.36
2 -1300.43 -1320.87
--------------------------------------
TOTAL -1300.42 -1320.38
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.076140 0.000149 0.053899 0.100009 0.075116 1285.71 1321.69 1.000
r(A<->C){all} 0.137483 0.002801 0.045178 0.238309 0.130978 508.98 551.43 1.001
r(A<->G){all} 0.167082 0.002936 0.068154 0.271167 0.163665 523.71 577.92 1.002
r(A<->T){all} 0.114804 0.001706 0.037762 0.194427 0.111247 831.19 837.75 1.000
r(C<->G){all} 0.106598 0.002084 0.026648 0.193759 0.100501 360.75 463.85 1.002
r(C<->T){all} 0.365612 0.004370 0.235394 0.492322 0.363366 608.89 612.39 1.000
r(G<->T){all} 0.108420 0.001594 0.039431 0.190899 0.103180 655.15 672.56 1.001
pi(A){all} 0.219769 0.000231 0.189476 0.248068 0.219464 954.97 977.78 1.000
pi(C){all} 0.220062 0.000246 0.188979 0.249649 0.219458 1230.66 1235.43 1.000
pi(G){all} 0.232471 0.000261 0.199546 0.262412 0.232373 1096.81 1119.79 1.000
pi(T){all} 0.327699 0.000295 0.295398 0.361517 0.327326 1007.37 1068.95 1.000
alpha{1,2} 0.779644 0.752872 0.000217 2.512613 0.489435 1089.93 1109.33 1.000
alpha{3} 1.444429 1.301131 0.002920 3.812072 1.135705 1104.57 1221.85 1.000
pinvar{all} 0.295641 0.033936 0.000494 0.610508 0.281960 852.94 860.35 1.004
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\
***************** TYPES OF STANDARD ANALYSES *****************
(1) Selection Analyses
(2) Evolutionary Hypothesis Testing
(3) Relative evolutionary rate inference
(4) Coevolutionary analysis
(5) Basic Analyses
(6) Codon Selection Analyses
(7) Compartmentalization
(8) Data File Tools
(9) Miscellaneous
(10) Model Comparison
(11) Kernel Analysis Tools
(12) Molecular Clock
(13) Phylogeny Reconstruction
(14) Positive Selection
(15) Recombination
(16) Selection/Recombination
(17) Relative Rate
(18) Relative Ratio
(19) Substitution Rates
Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' *****************
(1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution).
(2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood).
(3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting).
(4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection).
(5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification).
(6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood).
(7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation).
Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types):
Analysis Description
--------------------
Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a
coding sequence alignment to determine whether some sites have been
subject to pervasive purifying or diversifying selection. v2.1
introduces two more methods for estimating the posterior distribution of
grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation
Bayes approximation (fastest). Please note that a FUBAR analysis
generates a cache and a results JSON file in the same directory as
directory as the original alignment. HyPhy needs to have write
privileges to this directory. For example if the original file is in
/home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there
will also exist FUBAR-generated files
/home/sergei/FUBAR/data/pol.nex.FUBAR.json,
/home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide
checkpointing so that a partially completed analysis can be restarted.
- __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree
(one per partition)
- __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring
selection (2013), Mol Biol Evol. 30(5):1196-205
- __Written by__: Sergei L Kosakovsky Pond
- __Contact Information__: spond@temple.edu
- __Analysis Version__: 2.1
####Choose Genetic Code
1. [**Universal**] Universal code. (Genebank transl_table=1).
2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2).
3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3).
4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4).
5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5).
6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6).
7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9).
8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10).
9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12).
10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13).
11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14).
12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15).
13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16).
14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21).
15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22).
16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23).
17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24).
18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25).
19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26).
>Please choose an option (or press q to cancel selection):
>Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`)
>A tree was found in the data file: `(C156,C65,C31,C71,C108,C325,C144,C122,C331,C570,C547,C587,C363,C210,C195,C334,C510,C208,C343,C209,C44,C205,C571,C564,C226,C227,C356,C642,C248,C238,C60,C360,C302,C66,C250,C366,C440,C506,C552,C262,C372,C578,C576,C378,C103,C502,C286,C384,C247,C624,C298,C505,C390,C136,C391,C622,C648,C310,C396,C142,C535,C672,(C91,C106,C528),((((C168,C117,C154,C126),(C82,C164),C112,C130),((((C489,((C186,C124),C218)),(C33,C274)),C351),C682)),C166),(C562,C575),(C660,C196),(C180,C337,C118,C600))`
>Would you like to use it (y/n)?
>Loaded a multiple sequence alignment with **90** sequences, **230** codons, and **1** partitions from `/data//pss_subsets/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result/original_alignment/fubar/results/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1.fna`
> FUBAR will write cache and result files to _/data//pss_subsets/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result/original_alignment/fubar/results/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result/original_alignment/fubar/results/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1/LZW_M_AIJ01338_1_2012_02_China_Swine_PEDV.result.1.fna.FUBAR.json_, respectively
> Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer):
####Posterior estimation method
1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation)
2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed)
3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default)
>Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5):
### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model
Error:
Internal error, dumping the offending likelihood function to /tmp/hyphy.dumpInternal error in ComputeBranchCache (branch wHJDFCqC.tree_0.C672 ) reversible model cached likelihood = -4247.40748147251, directly computed likelihood = -4247.398774119658. This is most likely because a non-reversible model was incorrectly auto-detected (or specified by the model file in environment variables).
Function call stack
1 : Optimize storing into, mles, the following likelihood function:likelihoodFunction ;
-------
2 : A return statement with:1
-------
3 : A return statement with:1
-------
4 : gtr_results=estimators.FitGTR(filter_names,trees,gtr_results)
-------
5 : doGTR("fubar")
-------
6 : Call a nested list (via namespace):
Step 0.doGTR("fubar")
-------
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
