--- EXPERIMENT NOTES Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500 --- EXPERIMENT PROPERTIES --- PSRF SUMMARY Estimated marginal likelihoods for runs sampled in files "/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p": (Use the harmonic mean for Bayes factor comparisons of models) (Values are saved to the file /data/mrbayes_input.nex.lstat) Run Arithmetic mean Harmonic mean -------------------------------------- 1 -1900.35 -1926.59 2 -1897.86 -1925.36 -------------------------------------- TOTAL -1898.47 -1926.15 -------------------------------------- Model parameter summaries over the runs sampled in files "/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p": Summaries are based on a total of 3002 samples from 2 runs. Each run produced 2001 samples of which 1501 samples were included. Parameter summaries saved to file "/data/mrbayes_input.nex.pstat". 95% HPD Interval -------------------- Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+ ------------------------------------------------------------------------------------------------------ TL{all} 0.084306 0.000256 0.055029 0.115905 0.082714 1056.45 1151.05 1.000 r(A<->C){all} 0.049620 0.000514 0.010752 0.091629 0.045951 597.33 729.85 1.002 r(A<->G){all} 0.135237 0.001969 0.061439 0.231267 0.129683 480.54 542.63 1.000 r(A<->T){all} 0.025012 0.000382 0.000006 0.063761 0.020645 465.78 595.44 1.002 r(C<->G){all} 0.046947 0.000596 0.006201 0.094274 0.043176 741.65 746.82 1.000 r(C<->T){all} 0.645530 0.004078 0.523578 0.774151 0.647242 531.82 572.09 1.000 r(G<->T){all} 0.097654 0.001605 0.029480 0.176098 0.091904 390.31 442.48 1.000 pi(A){all} 0.280728 0.000190 0.254682 0.307842 0.280668 1135.16 1140.70 1.000 pi(C){all} 0.276865 0.000186 0.250129 0.302900 0.276790 1065.50 1152.47 1.000 pi(G){all} 0.222465 0.000170 0.199146 0.250210 0.222550 1155.44 1176.51 1.000 pi(T){all} 0.219941 0.000152 0.196327 0.244465 0.219729 1105.34 1120.18 1.000 alpha{1,2} 0.384920 0.232241 0.000233 1.208362 0.240684 991.54 1030.43 1.000 alpha{3} 1.473955 1.118861 0.001804 3.488639 1.201474 948.77 968.71 1.002 pinvar{all} 0.730174 0.008879 0.548103 0.877043 0.748539 586.59 663.84 1.002 ------------------------------------------------------------------------------------------------------ * Convergence diagnostic (ESS = Estimated Sample Size); min and avg values correspond to minimal and average ESS among runs. ESS value below 100 may indicate that the parameter is undersampled. + Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman and Rubin, 1992) should approach 1.0 as runs converge. --- CODEML SUMMARY
-- Starting log on Tue Nov 08 20:15:01 GMT 2022 -- -- Iteration: /working_dir/input/2_modified/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result-- -- Starting log on Tue Nov 08 20:15:13 GMT 2022 -- -- Iteration: /working_dir/input/2_modified/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result-- -- Starting log on Tue Nov 08 20:15:01 GMT 2022 -- -- Iteration: /working_dir/input/2_modified/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result-- -- Starting log on Tue Nov 08 20:41:19 GMT 2022 -- -- Iteration: /working_dir/pss_subsets/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result/gapped_alignment/fubar,NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1-- MrBayes v3.2.6 x64 (Bayesian Analysis of Phylogeny) Distributed under the GNU General Public License Type "help" or "help <command>" for information on the commands that are available. Type "about" for authorship and general information about the program. Executing file "/data/mrbayes_input.nex" UNIX line termination Longest line length = 63 Parsing file Expecting NEXUS formatted file Reading data block Allocated taxon set Allocated matrix Defining new matrix with 58 taxa and 1026 characters Missing data coded as ? Data matrix is interleaved Data is Dna Gaps coded as - Matching characters coded as . Taxon 1 -> C1 Taxon 2 -> C10 Taxon 3 -> C11 Taxon 4 -> C12 Taxon 5 -> C13 Taxon 6 -> C14 Taxon 7 -> C15 Taxon 8 -> C16 Taxon 9 -> C17 Taxon 10 -> C18 Taxon 11 -> C19 Taxon 12 -> C2 Taxon 13 -> C20 Taxon 14 -> C21 Taxon 15 -> C22 Taxon 16 -> C23 Taxon 17 -> C24 Taxon 18 -> C25 Taxon 19 -> C26 Taxon 20 -> C27 Taxon 21 -> C28 Taxon 22 -> C29 Taxon 23 -> C3 Taxon 24 -> C30 Taxon 25 -> C31 Taxon 26 -> C32 Taxon 27 -> C33 Taxon 28 -> C34 Taxon 29 -> C35 Taxon 30 -> C36 Taxon 31 -> C37 Taxon 32 -> C38 Taxon 33 -> C39 Taxon 34 -> C4 Taxon 35 -> C40 Taxon 36 -> C41 Taxon 37 -> C42 Taxon 38 -> C43 Taxon 39 -> C44 Taxon 40 -> C45 Taxon 41 -> C46 Taxon 42 -> C47 Taxon 43 -> C48 Taxon 44 -> C49 Taxon 45 -> C5 Taxon 46 -> C50 Taxon 47 -> C51 Taxon 48 -> C52 Taxon 49 -> C53 Taxon 50 -> C54 Taxon 51 -> C55 Taxon 52 -> C56 Taxon 53 -> C57 Taxon 54 -> C58 Taxon 55 -> C6 Taxon 56 -> C7 Taxon 57 -> C8 Taxon 58 -> C9 Successfully read matrix Setting default partition (does not divide up characters) Setting model defaults Seed (for generating default start values) = 1667940082 Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>" Exiting data block Reading mrbayes block Setting autoclose to yes Setting nowarnings to yes Defining charset called 'first_pos' Defining charset called 'second_pos' Defining charset called 'third_pos' Defining partition called 'by_codon' Setting by_codon as the partition, dividing characters into 3 parts. Setting model defaults Seed (for generating default start values) = 1539300503 Setting Nst to 6 for partition 1 Setting Nst to 6 for partition 2 Setting Nst to 6 for partition 3 Setting Rates to Invgamma for partition 1 Setting Rates to Invgamma for partition 2 Setting Rates to Invgamma for partition 3 Successfully set likelihood model parameters to all applicable data partitions Unlinking Setting number of generations to 1000000 Running Markov chain MCMC stamp = 9106610585 Seed = 1964617225 Swapseed = 1667940082 Model settings: Settings for partition 1 -- Datatype = DNA Nucmodel = 4by4 Nst = 6 Substitution rates, expressed as proportions of the rate sum, have a Dirichlet prior (1.00,1.00,1.00,1.00,1.00,1.00) Covarion = No # States = 4 State frequencies have a Dirichlet prior (1.00,1.00,1.00,1.00) Rates = Invgamma The distribution is approximated using 4 categories. Likelihood summarized over all rate categories in each generation. Shape parameter is exponentially distributed with parameter (1.00). Proportion of invariable sites is uniformly dist- ributed on the interval (0.00,1.00). Settings for partition 2 -- Datatype = DNA Nucmodel = 4by4 Nst = 6 Substitution rates, expressed as proportions of the rate sum, have a Dirichlet prior (1.00,1.00,1.00,1.00,1.00,1.00) Covarion = No # States = 4 State frequencies have a Dirichlet prior (1.00,1.00,1.00,1.00) Rates = Invgamma The distribution is approximated using 4 categories. Likelihood summarized over all rate categories in each generation. Shape parameter is exponentially distributed with parameter (1.00). Proportion of invariable sites is uniformly dist- ributed on the interval (0.00,1.00). Settings for partition 3 -- Datatype = DNA Nucmodel = 4by4 Nst = 6 Substitution rates, expressed as proportions of the rate sum, have a Dirichlet prior (1.00,1.00,1.00,1.00,1.00,1.00) Covarion = No # States = 4 State frequencies have a Dirichlet prior (1.00,1.00,1.00,1.00) Rates = Invgamma The distribution is approximated using 4 categories. Likelihood summarized over all rate categories in each generation. Shape parameter is exponentially distributed with parameter (1.00). Proportion of invariable sites is uniformly dist- ributed on the interval (0.00,1.00). Active parameters: Partition(s) Parameters 1 2 3 --------------------------- Revmat 1 1 1 Statefreq 2 2 2 Shape 3 3 4 Pinvar 5 5 5 Ratemultiplier 6 6 6 Topology 7 7 7 Brlens 8 8 8 --------------------------- Parameters can be linked or unlinked across partitions using 'link' and 'unlink' 1 -- Parameter = Revmat{all} Type = Rates of reversible rate matrix Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00) Partitions = All 2 -- Parameter = Pi{all} Type = Stationary state frequencies Prior = Dirichlet Partitions = All 3 -- Parameter = Alpha{1,2} Type = Shape of scaled gamma distribution of site rates Prior = Exponential(1.00) Partitions = 1 and 2 4 -- Parameter = Alpha{3} Type = Shape of scaled gamma distribution of site rates Prior = Exponential(1.00) Partition = 3 5 -- Parameter = Pinvar{all} Type = Proportion of invariable sites Prior = Uniform(0.00,1.00) Partitions = All 6 -- Parameter = Ratemultiplier{all} Type = Partition-specific rate multiplier Prior = Fixed(1.0) Partitions = All 7 -- Parameter = Tau{all} Type = Topology Prior = All topologies equally probable a priori Partitions = All Subparam. = V{all} 8 -- Parameter = V{all} Type = Branch lengths Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0) Partitions = All The MCMC sampler will use the following moves: With prob. Chain will use move 0.91 % Dirichlet(Revmat{all}) 0.91 % Slider(Revmat{all}) 0.91 % Dirichlet(Pi{all}) 0.91 % Slider(Pi{all}) 1.82 % Multiplier(Alpha{1,2}) 1.82 % Multiplier(Alpha{3}) 1.82 % Slider(Pinvar{all}) 9.09 % ExtSPR(Tau{all},V{all}) 9.09 % ExtTBR(Tau{all},V{all}) 9.09 % NNI(Tau{all},V{all}) 9.09 % ParsSPR(Tau{all},V{all}) 36.36 % Multiplier(V{all}) 12.73 % Nodeslider(V{all}) 5.45 % TLMultiplier(V{all}) Division 1 has 12 unique site patterns Division 2 has 11 unique site patterns Division 3 has 48 unique site patterns Initializing conditional likelihoods Using standard SSE likelihood calculator for division 1 (single-precision) Using standard SSE likelihood calculator for division 2 (single-precision) Using standard SSE likelihood calculator for division 3 (single-precision) Initializing invariable-site conditional likelihoods Initial log likelihoods and log prior probs for run 1: Chain 1 -- -4055.838630 -- 121.898846 Chain 2 -- -3920.154726 -- 121.898846 Chain 3 -- -4048.160593 -- 121.898846 Chain 4 -- -4089.907557 -- 121.898846 Initial log likelihoods and log prior probs for run 2: Chain 1 -- -4075.511802 -- 121.898846 Chain 2 -- -4067.435549 -- 121.898846 Chain 3 -- -4035.458980 -- 121.898846 Chain 4 -- -4090.584238 -- 121.898846 Using a relative burnin of 25.0 % for diagnostics Chain results (1000000 generations requested): 0 -- [-4055.839] (-3920.155) (-4048.161) (-4089.908) * [-4075.512] (-4067.436) (-4035.459) (-4090.584) 1000 -- (-2703.292) [-2457.304] (-2528.324) (-2818.464) * (-2779.315) (-2766.401) [-2632.713] (-2619.200) -- 0:16:39 2000 -- (-2467.543) [-2259.471] (-2357.732) (-2504.529) * (-2445.704) (-2462.028) [-2336.871] (-2363.603) -- 0:16:38 3000 -- (-2312.422) (-2234.936) [-2220.513] (-2369.460) * (-2315.827) (-2257.743) [-2248.033] (-2255.872) -- 0:22:09 4000 -- (-2185.397) (-2220.026) [-2154.654] (-2214.380) * (-2245.587) [-2155.212] (-2271.586) (-2182.278) -- 0:20:45 5000 -- (-2174.913) (-2205.941) [-2150.293] (-2149.790) * (-2217.908) [-2137.072] (-2238.158) (-2155.574) -- 0:19:54 Average standard deviation of split frequencies: 0.092105 6000 -- (-2151.710) (-2176.302) (-2155.129) [-2135.044] * (-2173.623) (-2137.752) (-2236.561) [-2134.280] -- 0:19:19 7000 -- (-2164.566) (-2140.602) [-2129.590] (-2141.194) * (-2131.389) (-2143.577) (-2236.941) [-2118.493] -- 0:18:54 8000 -- (-2210.953) (-2114.124) [-2126.312] (-2136.120) * (-2143.329) (-2133.254) (-2229.222) [-2126.956] -- 0:18:36 9000 -- (-2238.034) [-2140.013] (-2122.795) (-2137.920) * (-2137.633) (-2123.876) (-2234.397) [-2115.854] -- 0:18:21 10000 -- (-2234.848) (-2148.065) (-2121.880) [-2122.630] * [-2112.949] (-2123.130) (-2242.002) (-2138.895) -- 0:18:09 Average standard deviation of split frequencies: 0.087849 11000 -- (-2241.526) (-2152.292) [-2111.353] (-2120.265) * (-2134.626) [-2120.139] (-2230.019) (-2134.012) -- 0:17:58 12000 -- (-2240.436) (-2165.910) [-2114.999] (-2123.645) * (-2130.384) [-2112.627] (-2207.439) (-2125.030) -- 0:19:12 13000 -- (-2218.453) (-2149.534) [-2112.749] (-2132.514) * (-2146.657) (-2119.726) (-2209.122) [-2112.237] -- 0:18:58 14000 -- (-2231.755) (-2159.398) (-2125.359) [-2120.250] * (-2138.190) [-2111.020] (-2214.872) (-2131.388) -- 0:18:46 15000 -- (-2226.864) (-2149.071) (-2126.344) [-2114.789] * (-2123.764) [-2120.520] (-2215.067) (-2134.799) -- 0:18:36 Average standard deviation of split frequencies: 0.078717 16000 -- (-2238.441) (-2133.799) (-2129.859) [-2118.068] * (-2153.042) [-2111.171] (-2205.948) (-2134.992) -- 0:18:27 17000 -- (-2240.878) (-2133.212) (-2114.513) [-2104.421] * (-2123.974) [-2114.417] (-2195.361) (-2132.166) -- 0:18:18 18000 -- (-2248.930) (-2148.154) (-2116.142) [-2104.393] * (-2120.499) [-2105.059] (-2211.017) (-2126.622) -- 0:18:11 19000 -- (-2212.619) (-2129.795) [-2116.311] (-2108.088) * (-2134.950) (-2118.216) (-2211.695) [-2118.883] -- 0:18:55 20000 -- (-2236.435) (-2143.721) [-2104.302] (-2118.387) * (-2126.794) (-2127.364) (-2205.112) [-2121.467] -- 0:18:47 Average standard deviation of split frequencies: 0.063909 21000 -- (-2232.249) (-2127.709) (-2109.986) [-2111.471] * (-2149.933) [-2112.337] (-2203.520) (-2114.497) -- 0:18:38 22000 -- (-2211.758) (-2137.743) (-2116.662) [-2113.648] * (-2140.049) [-2115.753] (-2205.066) (-2113.874) -- 0:18:31 23000 -- (-2222.461) (-2129.822) (-2122.985) [-2117.625] * (-2139.767) (-2129.111) (-2203.592) [-2124.051] -- 0:18:24 24000 -- (-2224.242) (-2122.670) [-2121.630] (-2121.476) * [-2114.100] (-2123.169) (-2221.593) (-2135.677) -- 0:18:18 25000 -- (-2215.029) (-2126.115) [-2129.012] (-2131.063) * (-2118.099) [-2117.008] (-2217.056) (-2139.420) -- 0:18:12 Average standard deviation of split frequencies: 0.053439 26000 -- (-2214.949) (-2134.460) [-2114.793] (-2140.521) * [-2107.904] (-2102.926) (-2223.649) (-2129.135) -- 0:18:06 27000 -- (-2214.612) (-2134.348) [-2123.272] (-2151.596) * (-2106.796) [-2117.496] (-2212.368) (-2159.252) -- 0:18:01 28000 -- (-2235.618) (-2133.567) [-2112.791] (-2132.907) * [-2109.212] (-2128.702) (-2215.275) (-2146.662) -- 0:17:56 29000 -- (-2217.456) [-2106.280] (-2126.464) (-2131.683) * (-2129.489) [-2135.640] (-2205.306) (-2159.004) -- 0:18:24 30000 -- (-2226.655) (-2120.087) (-2125.566) [-2120.409] * [-2116.708] (-2127.010) (-2211.196) (-2160.804) -- 0:18:19 Average standard deviation of split frequencies: 0.046500 31000 -- (-2227.445) [-2126.836] (-2141.290) (-2112.287) * [-2116.855] (-2118.072) (-2209.930) (-2172.784) -- 0:18:14 32000 -- (-2222.026) [-2115.059] (-2122.836) (-2125.620) * (-2132.329) [-2110.722] (-2197.841) (-2135.541) -- 0:18:09 33000 -- (-2230.165) [-2117.223] (-2116.888) (-2151.387) * (-2121.240) [-2122.307] (-2207.970) (-2140.305) -- 0:18:04 34000 -- (-2219.610) (-2127.112) [-2113.052] (-2137.550) * (-2121.140) [-2110.382] (-2195.171) (-2134.164) -- 0:17:59 35000 -- (-2245.218) (-2123.533) (-2127.200) [-2129.043] * (-2121.585) [-2131.417] (-2216.027) (-2139.375) -- 0:17:55 Average standard deviation of split frequencies: 0.041466 36000 -- (-2236.311) (-2141.483) [-2119.751] (-2108.087) * (-2132.933) [-2115.661] (-2180.990) (-2136.775) -- 0:17:51 37000 -- (-2232.625) (-2136.902) (-2123.782) [-2123.740] * [-2125.626] (-2125.016) (-2194.931) (-2138.000) -- 0:17:47 38000 -- (-2234.187) (-2133.566) (-2133.368) [-2114.751] * (-2141.789) (-2151.382) (-2201.483) [-2129.511] -- 0:17:43 39000 -- (-2233.710) (-2137.328) (-2134.859) [-2122.902] * (-2131.838) (-2149.194) (-2202.126) [-2126.186] -- 0:18:04 40000 -- (-2223.487) (-2126.625) [-2139.083] (-2116.715) * (-2143.136) (-2150.475) (-2194.649) [-2114.652] -- 0:18:00 Average standard deviation of split frequencies: 0.040799 41000 -- (-2222.059) (-2122.955) (-2149.456) [-2112.065] * (-2141.645) (-2137.260) (-2204.281) [-2124.795] -- 0:17:55 42000 -- (-2208.086) [-2130.372] (-2142.499) (-2113.964) * (-2147.902) (-2132.904) (-2208.791) [-2124.892] -- 0:17:52 43000 -- (-2218.870) [-2114.174] (-2139.909) (-2119.633) * (-2137.589) (-2132.326) (-2198.717) [-2125.212] -- 0:17:48 44000 -- (-2234.040) [-2123.190] (-2135.043) (-2134.615) * (-2148.081) [-2118.181] (-2197.676) (-2128.202) -- 0:17:44 45000 -- (-2226.173) [-2120.091] (-2120.256) (-2141.862) * (-2134.547) (-2117.180) (-2202.963) [-2122.208] -- 0:17:41 Average standard deviation of split frequencies: 0.040052 46000 -- (-2225.798) (-2120.929) (-2127.160) [-2114.823] * (-2120.967) (-2134.810) (-2217.837) [-2109.941] -- 0:17:37 47000 -- (-2216.929) (-2122.763) (-2135.045) [-2096.494] * (-2132.821) (-2125.046) (-2215.062) [-2120.108] -- 0:17:34 48000 -- (-2212.687) [-2112.218] (-2118.793) (-2123.023) * (-2142.164) (-2119.314) (-2222.105) [-2114.210] -- 0:17:51 49000 -- (-2209.397) [-2099.954] (-2133.604) (-2132.189) * (-2164.519) (-2115.160) (-2217.659) [-2130.641] -- 0:17:47 50000 -- (-2218.774) [-2115.603] (-2154.381) (-2125.637) * (-2138.024) [-2111.362] (-2227.210) (-2131.306) -- 0:17:44 Average standard deviation of split frequencies: 0.037778 51000 -- (-2222.412) (-2111.380) (-2122.866) [-2113.187] * (-2139.275) (-2120.335) (-2217.404) [-2127.393] -- 0:17:40 52000 -- (-2219.762) [-2114.983] (-2144.659) (-2126.360) * (-2149.515) (-2114.113) (-2216.319) [-2110.995] -- 0:17:37 53000 -- (-2213.104) [-2122.569] (-2140.921) (-2126.075) * (-2135.441) [-2113.044] (-2209.307) (-2125.303) -- 0:17:34 54000 -- (-2206.686) [-2122.173] (-2157.675) (-2120.340) * (-2138.751) [-2111.210] (-2224.564) (-2135.681) -- 0:17:31 55000 -- (-2220.456) (-2126.942) (-2143.281) [-2116.108] * (-2132.873) (-2115.085) (-2212.265) [-2128.248] -- 0:17:28 Average standard deviation of split frequencies: 0.039128 56000 -- (-2216.780) (-2132.810) (-2127.350) [-2111.554] * (-2123.973) (-2119.246) (-2233.325) [-2107.940] -- 0:17:25 57000 -- (-2214.015) (-2131.543) (-2144.224) [-2115.582] * (-2129.545) (-2120.588) (-2224.203) [-2116.059] -- 0:17:22 58000 -- (-2223.452) (-2106.625) (-2164.312) [-2121.563] * (-2137.302) [-2113.755] (-2218.282) (-2124.010) -- 0:17:19 59000 -- (-2217.655) [-2098.971] (-2143.871) (-2114.961) * (-2145.841) (-2113.547) (-2217.141) [-2117.353] -- 0:17:32 60000 -- (-2216.214) (-2133.418) (-2119.140) [-2117.720] * (-2147.416) (-2128.071) (-2209.951) [-2117.540] -- 0:17:29 Average standard deviation of split frequencies: 0.038067 61000 -- (-2203.298) (-2112.796) (-2139.374) [-2119.560] * (-2149.105) (-2120.890) (-2216.952) [-2111.325] -- 0:17:26 62000 -- (-2211.900) (-2128.890) [-2125.724] (-2151.702) * (-2146.744) [-2127.073] (-2217.236) (-2123.951) -- 0:17:23 63000 -- (-2213.923) [-2122.751] (-2125.257) (-2153.581) * (-2166.302) (-2121.980) (-2220.662) [-2113.943] -- 0:17:21 64000 -- (-2195.983) [-2112.317] (-2137.154) (-2151.252) * (-2154.744) (-2114.614) (-2209.478) [-2122.100] -- 0:17:18 65000 -- (-2208.397) [-2130.069] (-2158.257) (-2121.675) * (-2138.168) (-2109.580) (-2204.485) [-2125.467] -- 0:17:15 Average standard deviation of split frequencies: 0.036686 66000 -- (-2213.134) [-2127.141] (-2121.829) (-2123.981) * (-2149.984) [-2104.094] (-2206.928) (-2130.354) -- 0:17:13 67000 -- (-2215.856) [-2130.201] (-2131.575) (-2136.744) * (-2149.996) (-2123.280) (-2214.873) [-2116.458] -- 0:17:10 68000 -- (-2211.542) [-2119.672] (-2133.367) (-2157.568) * (-2151.222) (-2121.182) (-2231.471) [-2117.888] -- 0:17:07 69000 -- (-2227.770) (-2127.003) (-2116.641) [-2121.911] * (-2147.634) [-2124.656] (-2216.984) (-2127.752) -- 0:17:05 70000 -- (-2209.848) [-2117.775] (-2123.811) (-2129.982) * (-2143.422) [-2112.989] (-2211.196) (-2131.273) -- 0:17:03 Average standard deviation of split frequencies: 0.038293 71000 -- (-2209.474) (-2127.981) (-2129.649) [-2107.579] * (-2138.467) [-2113.224] (-2203.754) (-2117.714) -- 0:17:00 72000 -- (-2225.460) (-2145.422) (-2129.876) [-2118.639] * (-2138.013) [-2111.794] (-2214.594) (-2148.632) -- 0:16:58 73000 -- (-2224.133) [-2121.772] (-2128.479) (-2125.240) * (-2151.079) [-2120.442] (-2224.991) (-2130.087) -- 0:17:08 74000 -- (-2199.302) (-2147.836) (-2122.238) [-2125.397] * (-2157.825) [-2105.046] (-2208.770) (-2147.006) -- 0:17:06 75000 -- (-2204.073) (-2146.969) [-2124.452] (-2129.061) * (-2140.745) [-2101.616] (-2208.898) (-2129.289) -- 0:17:03 Average standard deviation of split frequencies: 0.036602 76000 -- (-2202.550) (-2165.031) (-2134.917) [-2131.778] * (-2121.430) [-2118.942] (-2219.020) (-2126.820) -- 0:17:01 77000 -- (-2212.458) (-2156.746) [-2117.557] (-2109.781) * (-2118.434) [-2126.065] (-2214.585) (-2146.790) -- 0:16:58 78000 -- (-2218.655) (-2126.351) (-2128.400) [-2110.297] * (-2140.299) [-2126.211] (-2202.459) (-2126.857) -- 0:16:56 79000 -- (-2203.075) (-2126.852) (-2127.703) [-2105.961] * (-2145.191) (-2119.482) (-2208.487) [-2126.916] -- 0:16:54 80000 -- (-2211.121) (-2136.796) (-2126.624) [-2098.335] * (-2146.504) [-2130.426] (-2216.863) (-2139.397) -- 0:16:52 Average standard deviation of split frequencies: 0.035180 81000 -- (-2198.409) (-2150.411) (-2124.949) [-2114.433] * (-2135.267) (-2124.110) (-2228.070) [-2115.220] -- 0:16:49 82000 -- (-2215.738) (-2156.762) (-2139.611) [-2118.393] * (-2110.785) (-2133.088) (-2215.984) [-2121.385] -- 0:16:47 83000 -- (-2205.402) (-2144.049) [-2116.688] (-2133.837) * (-2118.606) [-2110.282] (-2230.596) (-2147.097) -- 0:16:45 84000 -- (-2213.280) (-2153.582) [-2111.309] (-2128.451) * (-2130.930) [-2115.396] (-2249.197) (-2131.991) -- 0:16:54 85000 -- (-2211.034) (-2145.144) (-2124.630) [-2119.003] * (-2134.990) [-2115.222] (-2234.233) (-2128.043) -- 0:16:51 Average standard deviation of split frequencies: 0.032178 86000 -- (-2203.922) (-2137.849) [-2111.762] (-2119.573) * (-2132.308) [-2115.457] (-2223.324) (-2120.486) -- 0:16:49 87000 -- (-2204.424) (-2127.919) [-2105.474] (-2123.824) * (-2121.691) [-2113.843] (-2225.594) (-2115.929) -- 0:16:47 88000 -- (-2214.266) (-2133.328) [-2112.071] (-2133.908) * [-2119.246] (-2130.924) (-2220.314) (-2122.519) -- 0:16:45 89000 -- (-2223.769) (-2134.495) [-2120.237] (-2138.486) * (-2134.794) [-2112.635] (-2217.343) (-2118.719) -- 0:16:43 90000 -- (-2211.841) (-2152.508) [-2121.380] (-2127.004) * (-2120.756) (-2119.581) (-2234.098) [-2111.917] -- 0:16:41 Average standard deviation of split frequencies: 0.028749 91000 -- (-2212.186) (-2154.359) [-2122.101] (-2112.376) * (-2125.699) [-2106.392] (-2228.440) (-2135.306) -- 0:16:38 92000 -- (-2217.648) (-2172.168) (-2125.140) [-2115.363] * (-2142.471) [-2097.136] (-2216.099) (-2132.760) -- 0:16:36 93000 -- (-2223.859) (-2160.562) (-2139.689) [-2112.733] * (-2112.091) [-2127.254] (-2218.429) (-2144.069) -- 0:16:44 94000 -- (-2214.704) (-2135.935) [-2131.052] (-2133.516) * [-2115.241] (-2134.680) (-2206.770) (-2142.953) -- 0:16:42 95000 -- (-2220.599) (-2121.320) (-2154.395) [-2118.669] * [-2120.533] (-2143.937) (-2196.613) (-2125.994) -- 0:16:40 Average standard deviation of split frequencies: 0.028223 96000 -- (-2226.075) (-2135.160) (-2131.777) [-2104.788] * (-2151.395) (-2125.601) (-2215.776) [-2117.895] -- 0:16:38 97000 -- (-2226.610) [-2131.570] (-2152.092) (-2115.540) * (-2147.087) [-2123.645] (-2224.756) (-2120.637) -- 0:16:36 98000 -- (-2217.675) (-2134.300) (-2125.939) [-2113.608] * (-2154.347) [-2106.282] (-2213.108) (-2132.510) -- 0:16:34 99000 -- (-2208.119) [-2121.207] (-2151.188) (-2125.488) * (-2125.413) [-2120.315] (-2210.599) (-2117.278) -- 0:16:32 100000 -- (-2221.790) (-2122.865) (-2115.562) [-2129.433] * (-2137.000) [-2122.325] (-2211.436) (-2113.335) -- 0:16:30 Average standard deviation of split frequencies: 0.027340 101000 -- (-2234.335) (-2142.850) (-2122.062) [-2133.915] * (-2144.039) [-2119.704] (-2230.080) (-2131.913) -- 0:16:36 102000 -- (-2210.978) (-2122.411) (-2134.466) [-2130.206] * (-2134.655) [-2112.105] (-2218.765) (-2131.100) -- 0:16:34 103000 -- (-2199.776) [-2123.595] (-2150.012) (-2132.986) * (-2153.964) (-2112.600) (-2216.396) [-2112.987] -- 0:16:32 104000 -- (-2196.912) (-2145.887) (-2137.248) [-2103.805] * (-2133.764) (-2116.765) (-2219.420) [-2124.387] -- 0:16:30 105000 -- (-2202.714) [-2130.273] (-2144.050) (-2124.600) * (-2134.484) (-2114.394) (-2222.502) [-2101.071] -- 0:16:28 Average standard deviation of split frequencies: 0.027488 106000 -- (-2225.753) (-2128.910) (-2160.868) [-2118.192] * (-2143.357) [-2118.148] (-2217.704) (-2138.875) -- 0:16:26 107000 -- (-2229.011) (-2136.893) (-2130.647) [-2119.803] * (-2151.337) [-2116.996] (-2223.892) (-2119.656) -- 0:16:24 108000 -- (-2212.223) (-2134.516) (-2141.071) [-2116.471] * [-2134.908] (-2123.146) (-2239.723) (-2135.725) -- 0:16:22 109000 -- (-2218.559) (-2122.129) (-2137.610) [-2120.753] * [-2112.833] (-2133.316) (-2221.159) (-2114.679) -- 0:16:29 110000 -- (-2224.873) (-2123.483) (-2155.888) [-2119.200] * [-2105.164] (-2127.721) (-2224.919) (-2117.563) -- 0:16:27 Average standard deviation of split frequencies: 0.028553 111000 -- (-2205.761) [-2113.895] (-2159.487) (-2126.412) * (-2122.718) (-2128.967) (-2236.397) [-2120.380] -- 0:16:25 112000 -- (-2221.279) [-2107.687] (-2148.030) (-2123.091) * (-2118.831) [-2125.163] (-2227.082) (-2136.583) -- 0:16:23 113000 -- (-2219.964) [-2108.475] (-2130.280) (-2131.057) * (-2133.307) [-2117.335] (-2219.094) (-2139.401) -- 0:16:21 114000 -- (-2206.749) [-2122.992] (-2144.557) (-2136.235) * (-2126.578) [-2112.792] (-2215.136) (-2151.528) -- 0:16:19 115000 -- (-2216.533) [-2113.674] (-2131.507) (-2126.270) * [-2117.114] (-2111.219) (-2222.473) (-2133.634) -- 0:16:17 Average standard deviation of split frequencies: 0.028157 116000 -- (-2204.817) [-2110.019] (-2131.447) (-2152.371) * (-2143.431) [-2098.831] (-2202.346) (-2135.130) -- 0:16:15 117000 -- (-2190.832) [-2108.449] (-2119.710) (-2138.406) * (-2138.391) [-2104.430] (-2208.643) (-2158.788) -- 0:16:13 118000 -- (-2207.319) (-2110.646) [-2124.611] (-2144.395) * (-2121.155) [-2113.830] (-2210.164) (-2143.320) -- 0:16:19 119000 -- (-2199.976) (-2125.335) [-2120.998] (-2180.483) * (-2110.203) [-2119.591] (-2205.004) (-2177.573) -- 0:16:17 120000 -- (-2197.849) [-2133.433] (-2141.333) (-2166.559) * (-2110.199) [-2132.098] (-2209.782) (-2156.548) -- 0:16:15 Average standard deviation of split frequencies: 0.027467 121000 -- (-2197.628) (-2128.473) (-2155.383) [-2140.047] * [-2118.930] (-2128.427) (-2211.625) (-2128.616) -- 0:16:13 122000 -- (-2202.060) (-2129.258) (-2156.074) [-2135.239] * [-2106.939] (-2121.684) (-2217.412) (-2151.958) -- 0:16:11 123000 -- (-2213.463) [-2112.419] (-2142.193) (-2143.599) * [-2106.348] (-2116.908) (-2210.887) (-2160.545) -- 0:16:09 124000 -- (-2214.339) (-2133.563) (-2117.877) [-2125.339] * [-2109.960] (-2126.745) (-2215.991) (-2169.456) -- 0:16:07 125000 -- (-2212.384) (-2135.519) (-2119.937) [-2127.817] * (-2122.717) [-2137.152] (-2206.887) (-2171.069) -- 0:16:06 Average standard deviation of split frequencies: 0.027050 126000 -- (-2210.439) (-2140.157) (-2125.232) [-2111.534] * (-2125.368) [-2126.052] (-2220.016) (-2140.215) -- 0:16:04 127000 -- (-2208.171) (-2149.533) (-2123.516) [-2112.957] * [-2124.993] (-2132.158) (-2217.105) (-2152.740) -- 0:16:02 128000 -- (-2213.165) (-2133.755) (-2126.413) [-2105.681] * (-2121.564) (-2126.146) (-2223.571) [-2112.474] -- 0:16:00 129000 -- (-2213.463) (-2135.804) (-2147.365) [-2103.457] * (-2133.371) (-2130.754) (-2218.584) [-2113.341] -- 0:15:58 130000 -- (-2200.888) (-2131.879) [-2111.339] (-2124.130) * (-2144.585) (-2128.245) (-2220.884) [-2104.301] -- 0:15:57 Average standard deviation of split frequencies: 0.026598 131000 -- (-2202.656) (-2116.106) [-2114.613] (-2119.459) * (-2136.035) (-2129.736) (-2235.805) [-2113.424] -- 0:16:01 132000 -- (-2220.287) (-2133.395) [-2105.555] (-2129.996) * (-2133.864) [-2123.439] (-2212.975) (-2124.168) -- 0:16:00 133000 -- (-2226.620) (-2111.247) [-2114.078] (-2131.163) * (-2144.223) [-2107.885] (-2225.630) (-2137.227) -- 0:15:58 134000 -- (-2212.404) (-2125.063) (-2132.764) [-2126.158] * (-2124.951) [-2120.685] (-2235.663) (-2135.735) -- 0:15:56 135000 -- (-2203.393) [-2126.243] (-2143.021) (-2109.976) * [-2112.912] (-2112.150) (-2210.000) (-2140.970) -- 0:15:54 Average standard deviation of split frequencies: 0.025533 136000 -- (-2203.694) (-2145.310) (-2129.083) [-2116.063] * [-2112.939] (-2120.138) (-2214.104) (-2141.742) -- 0:15:52 137000 -- (-2215.158) [-2117.919] (-2145.377) (-2112.433) * [-2115.601] (-2125.006) (-2210.980) (-2120.447) -- 0:15:51 138000 -- (-2203.729) [-2109.382] (-2149.793) (-2133.280) * [-2111.251] (-2129.493) (-2218.264) (-2111.887) -- 0:15:49 139000 -- (-2208.325) [-2106.563] (-2165.958) (-2130.244) * [-2114.938] (-2133.799) (-2219.635) (-2113.653) -- 0:15:47 140000 -- (-2221.667) [-2118.533] (-2164.566) (-2132.605) * (-2136.099) [-2114.096] (-2224.403) (-2136.737) -- 0:15:46 Average standard deviation of split frequencies: 0.024840 141000 -- (-2221.723) [-2112.777] (-2151.449) (-2131.044) * (-2146.189) [-2118.162] (-2216.947) (-2119.274) -- 0:15:44 142000 -- (-2216.205) [-2110.552] (-2154.036) (-2111.696) * [-2119.835] (-2132.324) (-2213.912) (-2143.820) -- 0:15:42 143000 -- (-2236.296) (-2131.039) (-2156.091) [-2108.741] * (-2107.103) [-2115.141] (-2219.428) (-2145.001) -- 0:15:46 144000 -- (-2203.074) [-2113.974] (-2147.258) (-2125.406) * (-2141.302) [-2108.718] (-2207.980) (-2136.509) -- 0:15:45 145000 -- (-2222.701) [-2115.275] (-2154.535) (-2135.606) * [-2119.914] (-2121.592) (-2228.706) (-2151.574) -- 0:15:43 Average standard deviation of split frequencies: 0.024797 146000 -- (-2223.175) [-2118.119] (-2156.032) (-2120.215) * [-2117.451] (-2113.010) (-2208.729) (-2142.713) -- 0:15:41 147000 -- (-2204.518) (-2127.041) (-2139.289) [-2108.741] * (-2134.156) [-2115.375] (-2216.521) (-2148.168) -- 0:15:40 148000 -- (-2207.953) [-2135.022] (-2156.056) (-2118.865) * (-2114.659) [-2107.930] (-2211.359) (-2144.610) -- 0:15:38 149000 -- (-2213.645) (-2139.887) (-2163.481) [-2120.118] * (-2142.217) [-2108.824] (-2213.822) (-2136.444) -- 0:15:36 150000 -- (-2224.035) (-2129.357) (-2134.630) [-2125.484] * (-2129.630) [-2110.375] (-2205.894) (-2116.966) -- 0:15:40 Average standard deviation of split frequencies: 0.024398 151000 -- (-2220.937) (-2121.217) (-2140.873) [-2126.756] * (-2131.222) [-2107.218] (-2198.474) (-2129.352) -- 0:15:38 152000 -- (-2217.402) [-2111.916] (-2133.265) (-2125.300) * [-2110.766] (-2125.644) (-2194.192) (-2141.036) -- 0:15:37 153000 -- (-2228.695) [-2118.184] (-2129.719) (-2142.056) * (-2113.038) [-2113.449] (-2187.837) (-2146.251) -- 0:15:35 154000 -- (-2219.497) [-2118.630] (-2117.079) (-2155.173) * (-2105.547) [-2107.734] (-2194.297) (-2145.013) -- 0:15:33 155000 -- (-2218.565) (-2130.318) (-2151.869) [-2149.683] * [-2111.762] (-2127.780) (-2198.466) (-2144.644) -- 0:15:32 Average standard deviation of split frequencies: 0.023990 156000 -- (-2226.284) (-2119.570) [-2140.055] (-2131.201) * (-2121.959) [-2114.269] (-2213.931) (-2137.071) -- 0:15:30 157000 -- (-2220.438) (-2120.105) [-2125.905] (-2136.345) * (-2110.853) [-2117.128] (-2221.228) (-2122.494) -- 0:15:28 158000 -- (-2214.928) [-2116.089] (-2132.463) (-2134.660) * [-2109.593] (-2113.106) (-2223.844) (-2118.884) -- 0:15:27 159000 -- (-2216.673) [-2106.022] (-2127.137) (-2126.563) * [-2101.892] (-2143.491) (-2211.104) (-2106.055) -- 0:15:30 160000 -- (-2216.625) (-2115.511) (-2172.081) [-2117.623] * [-2106.870] (-2131.897) (-2209.810) (-2119.590) -- 0:15:29 Average standard deviation of split frequencies: 0.023411 161000 -- (-2227.002) (-2116.730) (-2173.537) [-2117.485] * [-2102.519] (-2140.996) (-2214.132) (-2135.633) -- 0:15:27 162000 -- (-2233.116) [-2102.817] (-2155.337) (-2123.471) * [-2098.414] (-2130.647) (-2223.447) (-2130.702) -- 0:15:25 163000 -- (-2257.395) (-2124.835) (-2153.319) [-2111.485] * [-2123.471] (-2161.391) (-2227.856) (-2134.135) -- 0:15:24 164000 -- (-2223.069) (-2131.120) (-2161.063) [-2122.130] * [-2121.068] (-2154.470) (-2210.767) (-2136.994) -- 0:15:22 165000 -- (-2225.408) (-2121.364) (-2159.556) [-2114.741] * [-2120.111] (-2121.558) (-2219.303) (-2148.045) -- 0:15:21 Average standard deviation of split frequencies: 0.022486 166000 -- (-2219.428) [-2115.367] (-2138.218) (-2111.649) * [-2124.253] (-2132.955) (-2209.207) (-2147.829) -- 0:15:19 167000 -- (-2210.257) [-2101.538] (-2148.303) (-2115.571) * (-2136.312) [-2112.797] (-2220.427) (-2138.020) -- 0:15:22 168000 -- (-2214.939) [-2112.394] (-2136.921) (-2116.446) * (-2138.018) [-2119.692] (-2226.590) (-2139.894) -- 0:15:21 169000 -- (-2209.817) [-2114.429] (-2120.573) (-2124.913) * (-2133.537) [-2118.011] (-2234.739) (-2140.038) -- 0:15:19 170000 -- (-2201.973) (-2107.116) (-2119.906) [-2115.868] * [-2100.362] (-2138.018) (-2215.362) (-2129.582) -- 0:15:17 Average standard deviation of split frequencies: 0.023619 171000 -- (-2209.238) (-2115.094) (-2120.234) [-2114.745] * [-2113.478] (-2146.993) (-2217.438) (-2131.448) -- 0:15:16 172000 -- (-2221.045) (-2112.621) (-2131.859) [-2112.761] * [-2118.410] (-2139.125) (-2208.663) (-2117.623) -- 0:15:14 173000 -- (-2213.665) (-2121.464) (-2137.523) [-2104.574] * (-2149.948) [-2118.414] (-2218.955) (-2108.654) -- 0:15:13 174000 -- (-2204.859) (-2121.934) (-2124.913) [-2108.677] * (-2136.648) (-2107.144) (-2200.864) [-2117.132] -- 0:15:11 175000 -- (-2203.921) (-2128.668) (-2122.237) [-2108.487] * (-2132.839) (-2120.673) (-2206.916) [-2119.778] -- 0:15:09 Average standard deviation of split frequencies: 0.023429 176000 -- (-2203.660) (-2146.959) (-2117.353) [-2115.549] * [-2116.051] (-2125.899) (-2207.991) (-2110.690) -- 0:15:12 177000 -- (-2210.110) (-2138.752) [-2126.785] (-2114.069) * (-2116.529) (-2131.999) (-2225.362) [-2116.189] -- 0:15:11 178000 -- (-2207.354) [-2122.882] (-2114.379) (-2116.025) * [-2118.451] (-2125.321) (-2209.510) (-2131.403) -- 0:15:09 179000 -- (-2204.172) [-2122.012] (-2129.933) (-2133.087) * (-2120.934) [-2118.600] (-2209.898) (-2145.513) -- 0:15:08 180000 -- (-2219.253) [-2117.630] (-2136.628) (-2130.290) * (-2124.800) [-2124.006] (-2208.014) (-2123.508) -- 0:15:06 Average standard deviation of split frequencies: 0.023099 181000 -- (-2212.675) [-2115.989] (-2137.509) (-2114.195) * (-2135.415) [-2113.014] (-2221.332) (-2125.544) -- 0:15:04 182000 -- (-2217.158) [-2116.027] (-2127.265) (-2139.524) * (-2146.267) [-2123.006] (-2227.829) (-2132.837) -- 0:15:03 183000 -- (-2201.099) [-2117.252] (-2140.932) (-2153.522) * (-2152.341) [-2114.829] (-2212.727) (-2132.081) -- 0:15:01 184000 -- (-2215.519) [-2105.618] (-2119.767) (-2157.817) * [-2116.666] (-2120.249) (-2211.853) (-2138.396) -- 0:15:00 185000 -- (-2211.696) [-2119.226] (-2123.148) (-2149.962) * [-2108.421] (-2123.024) (-2198.605) (-2154.695) -- 0:14:58 Average standard deviation of split frequencies: 0.022026 186000 -- (-2205.541) [-2126.736] (-2130.513) (-2131.531) * [-2115.755] (-2138.112) (-2214.243) (-2162.659) -- 0:15:01 187000 -- (-2224.119) (-2117.661) [-2114.277] (-2142.610) * [-2110.702] (-2126.693) (-2206.837) (-2152.802) -- 0:14:59 188000 -- (-2216.628) (-2149.737) [-2133.657] (-2134.261) * (-2123.559) [-2099.535] (-2214.014) (-2158.421) -- 0:14:58 189000 -- (-2210.481) (-2139.350) (-2137.351) [-2109.561] * (-2123.658) [-2103.085] (-2200.780) (-2153.094) -- 0:14:56 190000 -- (-2219.151) (-2166.400) [-2124.492] (-2128.010) * (-2129.134) [-2113.471] (-2210.961) (-2153.810) -- 0:14:55 Average standard deviation of split frequencies: 0.021568 191000 -- (-2221.926) (-2146.557) [-2120.830] (-2122.830) * (-2125.594) [-2115.564] (-2213.696) (-2133.313) -- 0:14:53 192000 -- (-2216.636) (-2174.986) [-2129.971] (-2143.410) * [-2115.312] (-2106.328) (-2215.654) (-2154.073) -- 0:14:52 193000 -- (-2226.628) (-2166.968) [-2123.662] (-2127.725) * (-2128.630) [-2111.894] (-2231.659) (-2173.021) -- 0:14:50 194000 -- (-2206.627) (-2166.315) [-2115.882] (-2142.665) * (-2126.841) [-2112.937] (-2218.873) (-2148.421) -- 0:14:49 195000 -- (-2210.410) (-2163.553) [-2113.765] (-2127.036) * (-2121.133) [-2114.702] (-2231.790) (-2161.404) -- 0:14:47 Average standard deviation of split frequencies: 0.021190 196000 -- (-2216.334) (-2142.681) [-2108.724] (-2131.562) * (-2132.331) [-2110.713] (-2230.030) (-2151.059) -- 0:14:46 197000 -- (-2211.605) (-2127.541) [-2121.532] (-2139.516) * [-2123.738] (-2126.089) (-2218.742) (-2161.458) -- 0:14:44 198000 -- (-2203.475) (-2152.882) [-2109.437] (-2127.365) * [-2128.290] (-2134.512) (-2218.097) (-2125.629) -- 0:14:43 199000 -- (-2189.776) (-2134.684) [-2089.099] (-2134.702) * [-2126.206] (-2145.269) (-2214.193) (-2140.600) -- 0:14:45 200000 -- (-2211.849) (-2134.411) [-2097.292] (-2144.071) * (-2132.771) (-2139.748) (-2221.406) [-2137.160] -- 0:14:44 Average standard deviation of split frequencies: 0.020991 201000 -- (-2198.514) (-2127.204) [-2104.843] (-2130.269) * (-2125.639) [-2131.423] (-2244.251) (-2136.445) -- 0:14:42 202000 -- (-2214.003) (-2110.401) [-2123.235] (-2179.982) * [-2114.694] (-2127.071) (-2230.489) (-2137.606) -- 0:14:40 203000 -- (-2219.259) (-2114.454) [-2112.874] (-2148.690) * (-2117.972) (-2132.602) (-2225.986) [-2116.045] -- 0:14:39 204000 -- (-2199.981) (-2121.089) [-2107.368] (-2124.868) * (-2113.590) (-2139.290) (-2238.167) [-2125.713] -- 0:14:37 205000 -- (-2202.713) (-2147.830) [-2108.567] (-2110.384) * [-2119.600] (-2118.554) (-2215.864) (-2142.758) -- 0:14:36 Average standard deviation of split frequencies: 0.020262 206000 -- (-2220.932) (-2132.100) (-2101.938) [-2114.781] * (-2128.663) [-2127.285] (-2220.030) (-2154.881) -- 0:14:34 207000 -- (-2235.192) (-2125.000) [-2104.431] (-2132.647) * [-2116.336] (-2131.243) (-2223.983) (-2138.085) -- 0:14:33 208000 -- (-2214.399) (-2144.139) [-2104.040] (-2138.391) * (-2131.384) [-2123.228] (-2192.459) (-2169.222) -- 0:14:31 209000 -- (-2221.509) (-2140.483) [-2111.767] (-2121.829) * (-2129.715) [-2107.873] (-2209.259) (-2143.235) -- 0:14:30 210000 -- (-2197.954) (-2141.102) [-2103.958] (-2125.255) * (-2142.945) [-2114.477] (-2218.314) (-2156.220) -- 0:14:32 Average standard deviation of split frequencies: 0.018975 211000 -- (-2196.825) (-2163.792) [-2104.898] (-2130.034) * (-2147.189) [-2120.951] (-2219.346) (-2123.845) -- 0:14:31 212000 -- (-2199.890) (-2151.834) [-2105.778] (-2130.916) * (-2173.747) [-2121.556] (-2205.256) (-2123.570) -- 0:14:29 213000 -- (-2198.649) (-2130.641) [-2117.707] (-2128.256) * (-2170.588) (-2132.235) (-2195.593) [-2122.576] -- 0:14:28 214000 -- (-2213.246) (-2141.184) (-2133.462) [-2118.174] * (-2148.476) (-2133.968) (-2207.733) [-2122.114] -- 0:14:26 215000 -- (-2214.091) (-2159.659) (-2111.190) [-2110.660] * (-2147.506) (-2127.710) (-2206.780) [-2116.181] -- 0:14:25 Average standard deviation of split frequencies: 0.017504 216000 -- (-2220.046) (-2147.360) (-2105.377) [-2110.092] * (-2141.814) (-2133.587) (-2225.957) [-2110.591] -- 0:14:23 217000 -- (-2210.983) (-2140.040) [-2113.119] (-2134.666) * (-2119.617) (-2120.883) (-2200.706) [-2132.882] -- 0:14:22 218000 -- (-2211.980) (-2159.761) (-2128.940) [-2133.130] * (-2129.762) [-2110.179] (-2203.166) (-2144.672) -- 0:14:20 219000 -- (-2218.981) (-2170.168) [-2126.536] (-2120.876) * (-2145.252) [-2104.017] (-2227.090) (-2115.211) -- 0:14:19 220000 -- (-2221.428) (-2130.710) [-2118.711] (-2135.442) * (-2160.296) [-2129.006] (-2220.204) (-2115.144) -- 0:14:21 Average standard deviation of split frequencies: 0.017886 221000 -- (-2220.609) (-2155.895) [-2117.967] (-2122.075) * (-2149.962) [-2127.522] (-2217.522) (-2127.457) -- 0:14:20 222000 -- (-2206.203) (-2153.334) (-2134.157) [-2135.394] * [-2124.741] (-2132.694) (-2203.419) (-2137.981) -- 0:14:18 223000 -- (-2214.953) (-2155.293) (-2121.761) [-2122.216] * (-2121.631) [-2119.109] (-2217.806) (-2123.818) -- 0:14:17 224000 -- (-2238.633) (-2161.838) (-2143.205) [-2121.346] * (-2140.510) [-2113.566] (-2213.922) (-2121.708) -- 0:14:15 225000 -- (-2230.784) (-2137.261) (-2130.391) [-2130.661] * (-2143.922) [-2108.845] (-2223.923) (-2120.874) -- 0:14:14 Average standard deviation of split frequencies: 0.016600 226000 -- (-2245.099) (-2155.739) (-2137.403) [-2127.588] * (-2142.093) [-2108.548] (-2213.097) (-2137.852) -- 0:14:12 227000 -- (-2239.633) (-2128.294) [-2117.296] (-2129.975) * (-2151.656) [-2119.022] (-2196.614) (-2136.400) -- 0:14:14 228000 -- (-2232.618) (-2130.137) (-2120.746) [-2133.442] * (-2135.895) [-2118.356] (-2201.513) (-2122.158) -- 0:14:13 229000 -- (-2215.096) (-2126.917) (-2122.402) [-2119.779] * (-2126.290) [-2112.177] (-2203.168) (-2139.494) -- 0:14:11 230000 -- (-2198.805) (-2135.899) (-2126.251) [-2108.397] * (-2124.373) [-2120.310] (-2211.649) (-2143.293) -- 0:14:10 Average standard deviation of split frequencies: 0.016435 231000 -- (-2208.295) (-2138.684) [-2111.074] (-2126.430) * (-2129.026) [-2115.557] (-2218.355) (-2125.909) -- 0:14:08 232000 -- (-2218.490) (-2137.892) [-2129.394] (-2134.000) * (-2126.131) [-2111.224] (-2228.913) (-2141.260) -- 0:14:07 233000 -- (-2223.696) (-2154.501) (-2116.499) [-2128.720] * [-2124.463] (-2118.366) (-2220.444) (-2133.371) -- 0:14:06 234000 -- (-2221.231) (-2160.086) (-2117.817) [-2130.488] * [-2109.707] (-2116.304) (-2222.122) (-2132.908) -- 0:14:04 235000 -- (-2243.500) (-2131.577) (-2131.158) [-2131.793] * [-2111.731] (-2127.209) (-2227.180) (-2125.405) -- 0:14:03 Average standard deviation of split frequencies: 0.016169 236000 -- (-2221.555) [-2123.281] (-2130.128) (-2130.143) * [-2119.850] (-2148.885) (-2217.643) (-2115.968) -- 0:14:04 237000 -- (-2220.193) [-2127.600] (-2122.874) (-2132.305) * [-2128.490] (-2147.905) (-2222.383) (-2130.479) -- 0:14:03 238000 -- (-2228.985) [-2119.563] (-2118.293) (-2152.590) * (-2125.475) (-2149.672) (-2210.772) [-2112.297] -- 0:14:02 239000 -- (-2233.389) (-2120.611) [-2111.083] (-2132.263) * (-2130.122) (-2138.413) (-2215.039) [-2115.384] -- 0:14:00 240000 -- (-2227.500) [-2116.079] (-2111.203) (-2132.941) * (-2123.667) (-2126.903) (-2214.302) [-2117.460] -- 0:13:59 Average standard deviation of split frequencies: 0.015941 241000 -- (-2212.580) [-2108.944] (-2126.907) (-2125.330) * (-2147.069) (-2132.673) (-2194.382) [-2104.651] -- 0:13:57 242000 -- (-2222.454) (-2103.345) [-2115.264] (-2120.828) * (-2115.990) (-2126.855) (-2220.885) [-2117.060] -- 0:13:56 243000 -- (-2209.032) [-2104.506] (-2112.244) (-2140.617) * [-2106.334] (-2109.197) (-2220.325) (-2112.393) -- 0:13:54 244000 -- (-2205.102) (-2104.254) [-2109.456] (-2142.413) * [-2106.616] (-2132.359) (-2204.111) (-2139.774) -- 0:13:53 245000 -- (-2207.507) (-2109.079) [-2108.125] (-2127.113) * [-2106.597] (-2123.850) (-2207.408) (-2132.924) -- 0:13:52 Average standard deviation of split frequencies: 0.015814 246000 -- (-2201.843) (-2128.523) (-2132.706) [-2112.498] * [-2103.803] (-2114.110) (-2202.759) (-2134.253) -- 0:13:53 247000 -- (-2199.980) (-2115.819) (-2123.025) [-2125.647] * [-2113.167] (-2143.808) (-2197.608) (-2107.403) -- 0:13:52 248000 -- (-2223.136) (-2122.240) [-2125.300] (-2120.571) * (-2128.726) (-2129.867) (-2192.897) [-2118.243] -- 0:13:50 249000 -- (-2217.434) [-2127.155] (-2120.790) (-2125.601) * (-2128.281) [-2121.268] (-2212.486) (-2139.562) -- 0:13:49 250000 -- (-2221.677) [-2109.910] (-2155.623) (-2133.576) * (-2123.453) (-2135.688) (-2227.494) [-2113.653] -- 0:13:48 Average standard deviation of split frequencies: 0.015777 251000 -- (-2225.301) [-2108.321] (-2149.749) (-2122.516) * (-2124.356) (-2138.854) (-2238.848) [-2113.936] -- 0:13:46 252000 -- (-2224.403) [-2119.920] (-2150.442) (-2117.138) * (-2167.733) [-2117.520] (-2237.499) (-2124.552) -- 0:13:45 253000 -- (-2230.917) [-2110.223] (-2139.175) (-2131.435) * (-2134.781) [-2123.823] (-2234.753) (-2149.919) -- 0:13:43 254000 -- (-2218.236) [-2113.548] (-2137.754) (-2127.766) * (-2143.844) [-2116.888] (-2226.849) (-2143.711) -- 0:13:42 255000 -- (-2206.069) [-2117.099] (-2125.925) (-2141.376) * (-2149.739) [-2120.518] (-2221.341) (-2136.602) -- 0:13:40 Average standard deviation of split frequencies: 0.015691 256000 -- (-2199.857) (-2117.155) [-2135.843] (-2149.218) * (-2140.746) [-2114.603] (-2225.551) (-2148.792) -- 0:13:39 257000 -- (-2210.762) [-2113.081] (-2134.152) (-2137.105) * (-2124.372) [-2116.702] (-2211.468) (-2144.383) -- 0:13:41 258000 -- (-2204.464) (-2116.721) [-2124.275] (-2135.642) * (-2124.720) [-2115.004] (-2206.859) (-2146.512) -- 0:13:39 259000 -- (-2215.219) (-2112.861) [-2130.001] (-2141.283) * (-2123.675) [-2111.480] (-2217.244) (-2143.556) -- 0:13:38 260000 -- (-2223.504) [-2121.128] (-2129.754) (-2128.686) * (-2121.016) [-2110.527] (-2235.766) (-2125.913) -- 0:13:36 Average standard deviation of split frequencies: 0.015693 261000 -- (-2233.618) (-2116.941) (-2124.894) [-2106.785] * (-2119.213) [-2107.237] (-2236.445) (-2133.144) -- 0:13:35 262000 -- (-2236.947) (-2141.915) (-2111.149) [-2110.288] * (-2124.516) [-2113.965] (-2224.975) (-2136.027) -- 0:13:34 263000 -- (-2212.042) (-2141.610) [-2110.915] (-2131.307) * (-2114.601) [-2105.078] (-2238.260) (-2131.735) -- 0:13:32 264000 -- (-2231.230) (-2123.433) [-2110.550] (-2137.988) * (-2115.953) [-2115.946] (-2235.886) (-2161.900) -- 0:13:31 265000 -- (-2211.948) (-2117.829) [-2120.978] (-2138.193) * (-2118.706) [-2105.426] (-2221.547) (-2141.569) -- 0:13:29 Average standard deviation of split frequencies: 0.015316 266000 -- (-2222.281) (-2132.233) [-2115.934] (-2145.381) * (-2134.833) (-2123.453) (-2209.728) [-2130.995] -- 0:13:28 267000 -- (-2221.523) (-2131.902) [-2109.598] (-2142.257) * (-2138.425) [-2110.783] (-2216.772) (-2139.501) -- 0:13:27 268000 -- (-2230.906) (-2131.368) [-2111.882] (-2135.502) * (-2158.277) [-2114.010] (-2220.147) (-2144.010) -- 0:13:25 269000 -- (-2219.651) (-2136.852) [-2111.796] (-2158.308) * (-2170.669) [-2110.459] (-2205.428) (-2139.583) -- 0:13:24 270000 -- (-2216.593) (-2117.981) [-2113.144] (-2161.138) * (-2131.451) [-2129.945] (-2218.310) (-2141.535) -- 0:13:23 Average standard deviation of split frequencies: 0.014593 271000 -- (-2216.073) (-2125.325) [-2110.692] (-2148.660) * (-2133.754) (-2131.147) (-2242.946) [-2107.549] -- 0:13:24 272000 -- (-2219.960) (-2119.431) [-2103.197] (-2138.227) * (-2139.251) [-2127.881] (-2219.143) (-2114.298) -- 0:13:22 273000 -- (-2228.848) (-2136.965) [-2102.263] (-2110.804) * (-2155.242) (-2142.258) (-2215.010) [-2099.367] -- 0:13:21 274000 -- (-2238.765) (-2121.182) [-2104.992] (-2124.136) * [-2136.101] (-2146.692) (-2202.169) (-2112.409) -- 0:13:20 275000 -- (-2234.191) (-2117.394) [-2096.616] (-2131.993) * (-2123.799) (-2152.400) (-2208.037) [-2102.693] -- 0:13:18 Average standard deviation of split frequencies: 0.014100 276000 -- (-2210.886) (-2122.017) [-2111.690] (-2136.888) * (-2121.869) (-2161.080) (-2209.316) [-2104.349] -- 0:13:17 277000 -- (-2224.166) [-2116.373] (-2114.056) (-2138.102) * [-2122.934] (-2155.620) (-2201.499) (-2116.079) -- 0:13:16 278000 -- (-2226.897) [-2112.701] (-2117.551) (-2131.053) * [-2122.969] (-2130.482) (-2200.363) (-2118.311) -- 0:13:14 279000 -- (-2210.673) [-2108.571] (-2120.960) (-2138.521) * (-2122.781) [-2129.469] (-2214.259) (-2140.399) -- 0:13:13 280000 -- (-2212.945) [-2134.819] (-2127.195) (-2132.467) * (-2124.598) [-2122.598] (-2214.872) (-2121.390) -- 0:13:12 Average standard deviation of split frequencies: 0.014259 281000 -- (-2208.896) (-2128.003) [-2106.379] (-2122.774) * (-2143.428) [-2114.471] (-2217.506) (-2110.880) -- 0:13:13 282000 -- (-2200.506) (-2132.753) [-2109.086] (-2135.309) * (-2126.670) (-2133.011) (-2205.918) [-2110.916] -- 0:13:11 283000 -- (-2198.575) [-2138.140] (-2127.947) (-2138.611) * (-2128.629) [-2133.278] (-2194.472) (-2126.965) -- 0:13:10 284000 -- (-2220.374) (-2134.254) [-2110.306] (-2164.700) * (-2113.036) [-2122.401] (-2224.655) (-2155.195) -- 0:13:09 285000 -- (-2215.170) (-2129.058) [-2117.822] (-2143.607) * [-2114.259] (-2137.546) (-2191.959) (-2156.996) -- 0:13:07 Average standard deviation of split frequencies: 0.014256 286000 -- (-2210.551) [-2112.868] (-2115.647) (-2141.066) * [-2109.650] (-2131.028) (-2197.341) (-2126.296) -- 0:13:06 287000 -- (-2210.433) (-2111.812) (-2134.318) [-2122.878] * (-2115.698) [-2109.911] (-2214.107) (-2141.980) -- 0:13:05 288000 -- (-2221.236) (-2138.494) [-2121.872] (-2140.633) * (-2139.380) [-2110.597] (-2214.467) (-2145.191) -- 0:13:03 289000 -- (-2201.971) (-2130.450) [-2116.114] (-2128.436) * (-2128.866) [-2110.213] (-2211.453) (-2133.913) -- 0:13:04 290000 -- (-2237.990) (-2156.107) (-2114.302) [-2111.473] * (-2147.765) [-2112.548] (-2183.560) (-2127.823) -- 0:13:03 Average standard deviation of split frequencies: 0.014544 291000 -- (-2203.264) (-2142.089) (-2104.952) [-2118.477] * (-2141.974) (-2122.306) (-2200.758) [-2128.743] -- 0:13:02 292000 -- (-2206.862) (-2127.421) [-2114.037] (-2139.990) * (-2124.695) [-2112.906] (-2193.826) (-2126.184) -- 0:13:00 293000 -- (-2223.032) (-2152.290) [-2127.142] (-2133.970) * (-2126.754) [-2110.754] (-2191.744) (-2123.103) -- 0:12:59 294000 -- (-2213.478) (-2133.481) (-2128.223) [-2115.156] * (-2146.145) (-2123.997) (-2212.336) [-2106.622] -- 0:12:58 295000 -- (-2202.430) (-2139.733) [-2114.482] (-2122.972) * (-2122.796) (-2133.338) (-2195.282) [-2115.045] -- 0:12:56 Average standard deviation of split frequencies: 0.014436 296000 -- (-2227.463) (-2151.590) [-2114.322] (-2128.989) * [-2107.950] (-2131.490) (-2205.717) (-2111.150) -- 0:12:55 297000 -- (-2213.682) (-2131.901) [-2107.959] (-2128.234) * [-2112.216] (-2133.693) (-2210.099) (-2124.655) -- 0:12:56 298000 -- (-2206.759) (-2129.760) [-2107.950] (-2140.741) * (-2122.176) (-2133.855) (-2205.376) [-2107.790] -- 0:12:55 299000 -- (-2190.430) (-2142.775) [-2106.388] (-2138.625) * [-2118.473] (-2141.817) (-2211.143) (-2106.763) -- 0:12:53 300000 -- (-2216.774) (-2115.513) [-2114.853] (-2145.901) * [-2118.422] (-2135.581) (-2195.613) (-2120.234) -- 0:12:52 Average standard deviation of split frequencies: 0.014145 301000 -- (-2213.535) [-2116.801] (-2136.226) (-2137.420) * (-2127.552) [-2110.418] (-2215.385) (-2137.273) -- 0:12:50 302000 -- (-2205.013) (-2120.436) (-2135.431) [-2127.295] * (-2130.597) [-2114.314] (-2221.898) (-2148.824) -- 0:12:49 303000 -- (-2206.902) [-2115.640] (-2144.970) (-2140.302) * (-2116.614) [-2127.576] (-2227.546) (-2150.910) -- 0:12:48 304000 -- (-2186.566) [-2114.470] (-2138.313) (-2132.177) * (-2114.032) [-2103.621] (-2220.584) (-2142.936) -- 0:12:46 305000 -- (-2198.570) (-2126.786) [-2119.732] (-2148.920) * (-2116.627) [-2117.533] (-2228.086) (-2125.978) -- 0:12:47 Average standard deviation of split frequencies: 0.013764 306000 -- (-2203.081) [-2128.643] (-2129.394) (-2139.794) * (-2128.550) (-2114.664) (-2225.925) [-2121.634] -- 0:12:46 307000 -- (-2210.428) [-2136.496] (-2133.076) (-2127.729) * (-2126.854) [-2116.404] (-2216.037) (-2119.847) -- 0:12:45 308000 -- (-2209.898) [-2127.650] (-2116.734) (-2149.286) * (-2128.776) (-2120.481) (-2242.058) [-2110.085] -- 0:12:43 309000 -- (-2214.128) (-2143.127) [-2104.040] (-2127.716) * (-2149.382) [-2126.580] (-2239.172) (-2117.333) -- 0:12:42 310000 -- (-2213.610) (-2167.612) [-2107.829] (-2132.499) * (-2136.615) (-2129.610) (-2226.425) [-2107.451] -- 0:12:41 Average standard deviation of split frequencies: 0.013591 311000 -- (-2204.861) (-2144.032) [-2122.511] (-2126.776) * (-2135.244) (-2136.217) (-2233.252) [-2106.841] -- 0:12:39 312000 -- (-2213.114) (-2155.441) [-2106.662] (-2128.426) * [-2129.443] (-2152.526) (-2232.336) (-2123.831) -- 0:12:38 313000 -- (-2197.830) (-2138.798) [-2110.863] (-2136.512) * (-2152.257) [-2132.631] (-2234.654) (-2106.070) -- 0:12:37 314000 -- (-2193.525) (-2152.994) [-2114.066] (-2129.642) * (-2139.425) [-2122.835] (-2218.107) (-2113.779) -- 0:12:35 315000 -- (-2215.277) (-2159.442) (-2139.543) [-2139.479] * (-2148.212) (-2133.128) (-2220.034) [-2134.774] -- 0:12:36 Average standard deviation of split frequencies: 0.012983 316000 -- (-2212.016) (-2143.140) [-2131.669] (-2132.933) * (-2143.100) (-2131.859) (-2210.972) [-2115.807] -- 0:12:35 317000 -- (-2206.203) [-2143.779] (-2140.974) (-2133.883) * [-2125.886] (-2130.840) (-2206.266) (-2116.632) -- 0:12:34 318000 -- (-2195.044) [-2116.829] (-2152.085) (-2126.620) * (-2114.137) (-2116.325) (-2213.692) [-2112.947] -- 0:12:32 319000 -- (-2224.756) [-2122.345] (-2138.325) (-2116.456) * (-2127.934) (-2142.246) (-2215.530) [-2129.260] -- 0:12:31 320000 -- (-2235.528) (-2123.457) (-2153.656) [-2104.754] * (-2144.234) (-2177.145) (-2205.828) [-2133.424] -- 0:12:30 Average standard deviation of split frequencies: 0.013644 321000 -- (-2208.533) [-2113.817] (-2159.074) (-2115.799) * [-2134.929] (-2176.928) (-2226.551) (-2128.610) -- 0:12:28 322000 -- (-2204.168) [-2132.049] (-2155.334) (-2130.274) * [-2129.921] (-2157.820) (-2201.621) (-2150.460) -- 0:12:27 323000 -- (-2215.211) (-2122.505) (-2185.003) [-2117.193] * [-2109.961] (-2141.006) (-2216.959) (-2133.663) -- 0:12:26 324000 -- (-2214.899) [-2115.888] (-2158.367) (-2119.571) * [-2099.905] (-2128.293) (-2207.020) (-2125.009) -- 0:12:24 325000 -- (-2234.283) [-2124.541] (-2134.220) (-2119.703) * [-2118.988] (-2139.020) (-2202.677) (-2134.588) -- 0:12:23 Average standard deviation of split frequencies: 0.013512 326000 -- (-2227.588) (-2135.106) (-2138.464) [-2113.713] * [-2122.839] (-2139.908) (-2197.132) (-2123.677) -- 0:12:22 327000 -- (-2206.394) (-2134.942) (-2124.920) [-2118.648] * (-2122.350) (-2154.715) (-2191.728) [-2121.554] -- 0:12:20 328000 -- (-2189.687) [-2135.051] (-2136.905) (-2118.711) * [-2128.160] (-2140.610) (-2215.246) (-2113.415) -- 0:12:21 329000 -- (-2191.191) (-2128.961) (-2146.097) [-2113.259] * (-2133.786) (-2159.859) (-2213.146) [-2110.095] -- 0:12:20 330000 -- (-2200.387) (-2129.027) (-2136.489) [-2116.984] * (-2132.274) (-2118.348) (-2219.222) [-2126.107] -- 0:12:19 Average standard deviation of split frequencies: 0.014042 331000 -- (-2213.883) (-2131.290) (-2150.039) [-2116.850] * (-2152.596) [-2112.529] (-2213.342) (-2123.120) -- 0:12:17 332000 -- (-2209.034) (-2129.684) (-2134.518) [-2122.791] * (-2152.546) (-2122.265) (-2203.690) [-2114.677] -- 0:12:16 333000 -- (-2187.410) [-2129.782] (-2137.826) (-2131.937) * (-2155.653) (-2111.395) (-2223.498) [-2106.879] -- 0:12:15 334000 -- (-2212.321) [-2118.508] (-2110.720) (-2149.541) * (-2132.121) (-2109.417) (-2204.928) [-2103.162] -- 0:12:13 335000 -- (-2208.683) (-2128.173) [-2122.773] (-2153.724) * (-2127.083) (-2116.220) (-2213.680) [-2125.873] -- 0:12:12 Average standard deviation of split frequencies: 0.014289 336000 -- (-2227.069) (-2126.254) [-2119.460] (-2159.969) * (-2110.043) (-2130.211) (-2226.573) [-2121.323] -- 0:12:11 337000 -- (-2218.505) [-2114.962] (-2129.319) (-2153.924) * (-2133.051) (-2109.306) (-2236.450) [-2110.988] -- 0:12:09 338000 -- (-2191.259) [-2115.341] (-2134.568) (-2156.799) * (-2140.594) [-2115.320] (-2211.796) (-2145.261) -- 0:12:10 339000 -- (-2225.122) [-2115.462] (-2135.434) (-2145.113) * (-2122.199) [-2111.491] (-2223.923) (-2140.467) -- 0:12:09 340000 -- (-2226.553) [-2109.287] (-2132.236) (-2135.512) * [-2128.346] (-2114.346) (-2220.025) (-2145.409) -- 0:12:07 Average standard deviation of split frequencies: 0.014269 341000 -- (-2215.652) [-2118.989] (-2151.269) (-2128.142) * [-2111.272] (-2142.043) (-2212.785) (-2153.501) -- 0:12:06 342000 -- (-2218.971) [-2122.924] (-2128.787) (-2127.773) * (-2111.070) [-2116.416] (-2205.567) (-2155.767) -- 0:12:05 343000 -- (-2212.047) [-2119.641] (-2122.783) (-2129.573) * [-2109.715] (-2129.031) (-2216.559) (-2148.890) -- 0:12:04 344000 -- (-2199.976) [-2124.101] (-2126.797) (-2131.902) * [-2108.741] (-2123.389) (-2215.614) (-2149.257) -- 0:12:02 345000 -- (-2204.585) [-2125.393] (-2120.058) (-2121.391) * [-2116.634] (-2111.204) (-2203.026) (-2143.472) -- 0:12:01 Average standard deviation of split frequencies: 0.013393 346000 -- (-2205.575) [-2125.180] (-2136.649) (-2113.349) * (-2125.701) [-2106.957] (-2220.289) (-2151.549) -- 0:12:02 347000 -- (-2205.480) [-2112.655] (-2129.415) (-2110.171) * (-2145.350) [-2114.202] (-2219.668) (-2148.022) -- 0:12:00 348000 -- (-2206.271) [-2102.230] (-2131.572) (-2140.593) * (-2153.289) [-2130.811] (-2221.970) (-2161.334) -- 0:11:59 349000 -- (-2195.222) [-2108.799] (-2137.915) (-2134.924) * [-2127.085] (-2126.089) (-2213.446) (-2153.381) -- 0:11:58 350000 -- (-2192.024) [-2112.189] (-2123.797) (-2147.594) * (-2129.595) [-2120.972] (-2204.076) (-2154.780) -- 0:11:56 Average standard deviation of split frequencies: 0.012995 351000 -- (-2197.527) [-2117.092] (-2133.253) (-2141.911) * (-2137.526) [-2109.329] (-2218.196) (-2148.185) -- 0:11:55 352000 -- (-2235.319) [-2114.577] (-2115.666) (-2139.057) * (-2128.754) [-2108.725] (-2225.282) (-2175.374) -- 0:11:54 353000 -- (-2218.632) (-2113.619) [-2117.316] (-2153.359) * (-2117.971) [-2111.445] (-2227.015) (-2142.074) -- 0:11:52 354000 -- (-2206.604) [-2112.719] (-2112.870) (-2135.947) * (-2133.964) [-2113.378] (-2215.548) (-2124.366) -- 0:11:53 355000 -- (-2231.820) [-2122.543] (-2134.750) (-2129.246) * (-2123.355) [-2114.697] (-2224.981) (-2128.468) -- 0:11:52 Average standard deviation of split frequencies: 0.012686 356000 -- (-2228.585) (-2127.459) [-2136.620] (-2146.011) * (-2121.376) [-2107.789] (-2216.089) (-2131.680) -- 0:11:50 357000 -- (-2219.783) (-2132.865) [-2123.346] (-2152.432) * (-2146.433) (-2123.825) (-2217.242) [-2123.035] -- 0:11:49 358000 -- (-2209.087) (-2153.003) (-2113.504) [-2121.564] * (-2134.107) (-2117.411) (-2210.296) [-2128.269] -- 0:11:48 359000 -- (-2206.145) (-2147.934) (-2127.500) [-2111.242] * (-2121.095) (-2122.337) (-2206.438) [-2119.430] -- 0:11:47 360000 -- (-2216.128) (-2137.058) (-2123.855) [-2118.891] * (-2142.157) (-2128.135) (-2196.834) [-2109.613] -- 0:11:45 Average standard deviation of split frequencies: 0.013184 361000 -- (-2209.812) (-2117.747) (-2127.504) [-2111.098] * (-2132.222) (-2116.445) (-2206.218) [-2107.995] -- 0:11:46 362000 -- (-2218.640) (-2119.265) (-2140.462) [-2119.635] * (-2140.430) (-2118.789) (-2230.652) [-2115.217] -- 0:11:44 363000 -- (-2239.025) (-2122.222) (-2143.115) [-2106.148] * (-2161.205) (-2141.514) (-2231.552) [-2120.619] -- 0:11:43 364000 -- (-2227.738) (-2119.768) (-2106.451) [-2111.504] * (-2154.035) [-2121.013] (-2229.389) (-2119.745) -- 0:11:42 365000 -- (-2228.684) (-2143.056) [-2123.730] (-2125.397) * (-2153.266) [-2110.019] (-2208.382) (-2115.555) -- 0:11:41 Average standard deviation of split frequencies: 0.013264 366000 -- (-2209.534) (-2149.507) [-2115.776] (-2123.578) * (-2144.964) (-2127.642) (-2217.284) [-2125.471] -- 0:11:39 367000 -- (-2207.176) (-2163.972) [-2104.159] (-2129.538) * (-2137.585) [-2120.402] (-2214.268) (-2140.054) -- 0:11:38 368000 -- (-2199.942) (-2127.379) [-2105.065] (-2124.067) * (-2132.959) [-2127.295] (-2229.831) (-2158.734) -- 0:11:37 369000 -- (-2215.702) (-2144.982) [-2116.402] (-2123.723) * (-2131.639) [-2110.698] (-2216.741) (-2147.609) -- 0:11:35 370000 -- (-2190.982) (-2154.578) [-2112.447] (-2125.288) * (-2127.822) [-2109.218] (-2211.753) (-2143.068) -- 0:11:36 Average standard deviation of split frequencies: 0.013259 371000 -- (-2207.931) (-2144.646) [-2103.933] (-2143.383) * [-2116.773] (-2123.310) (-2208.904) (-2144.302) -- 0:11:35 372000 -- (-2216.943) (-2144.361) [-2107.024] (-2134.462) * (-2114.696) [-2127.525] (-2204.385) (-2156.677) -- 0:11:33 373000 -- (-2211.433) (-2148.118) [-2126.099] (-2139.591) * [-2110.533] (-2108.451) (-2215.000) (-2142.598) -- 0:11:32 374000 -- (-2199.128) (-2143.687) [-2121.964] (-2147.422) * [-2106.928] (-2115.135) (-2207.861) (-2150.114) -- 0:11:31 375000 -- (-2206.698) (-2130.884) [-2120.392] (-2163.942) * [-2106.165] (-2124.979) (-2202.072) (-2126.507) -- 0:11:30 Average standard deviation of split frequencies: 0.013519 376000 -- (-2203.628) (-2165.017) [-2129.620] (-2156.727) * (-2113.409) [-2119.348] (-2214.440) (-2130.945) -- 0:11:28 377000 -- (-2206.148) (-2146.635) [-2120.894] (-2144.870) * (-2122.212) [-2110.658] (-2195.932) (-2134.929) -- 0:11:27 378000 -- (-2212.689) (-2140.923) [-2117.914] (-2155.767) * [-2120.485] (-2123.222) (-2191.577) (-2134.693) -- 0:11:26 379000 -- (-2218.381) [-2133.463] (-2114.833) (-2154.482) * (-2131.310) [-2113.820] (-2209.018) (-2139.962) -- 0:11:24 380000 -- (-2233.698) (-2143.649) [-2104.251] (-2159.571) * (-2123.652) [-2113.518] (-2228.144) (-2139.887) -- 0:11:23 Average standard deviation of split frequencies: 0.013129 381000 -- (-2213.980) (-2150.323) [-2112.194] (-2137.681) * [-2114.393] (-2122.865) (-2230.190) (-2130.862) -- 0:11:23 382000 -- (-2220.670) (-2156.832) (-2111.668) [-2124.012] * (-2110.822) (-2122.417) (-2223.222) [-2110.716] -- 0:11:22 383000 -- (-2206.874) (-2158.607) [-2117.036] (-2133.384) * (-2135.349) (-2128.215) (-2228.902) [-2112.455] -- 0:11:21 384000 -- (-2220.611) (-2127.281) [-2140.852] (-2151.271) * (-2135.697) (-2131.703) (-2216.473) [-2124.236] -- 0:11:20 385000 -- (-2230.387) [-2133.005] (-2126.272) (-2140.380) * (-2152.503) [-2123.443] (-2238.354) (-2127.603) -- 0:11:18 Average standard deviation of split frequencies: 0.013022 386000 -- (-2251.714) (-2127.924) [-2130.156] (-2165.496) * (-2125.980) [-2120.662] (-2229.290) (-2115.594) -- 0:11:17 387000 -- (-2239.220) (-2113.922) [-2119.697] (-2135.830) * (-2139.073) [-2105.607] (-2221.677) (-2109.624) -- 0:11:16 388000 -- (-2234.247) (-2149.085) [-2121.390] (-2134.732) * (-2141.024) (-2113.679) (-2213.421) [-2111.520] -- 0:11:15 389000 -- (-2227.530) (-2121.952) [-2118.718] (-2137.358) * (-2145.463) (-2127.630) (-2208.847) [-2109.614] -- 0:11:13 390000 -- (-2224.393) [-2120.766] (-2117.042) (-2150.215) * (-2144.545) (-2140.372) (-2227.239) [-2118.645] -- 0:11:12 Average standard deviation of split frequencies: 0.013427 391000 -- (-2226.052) [-2117.023] (-2119.640) (-2145.551) * (-2140.925) (-2136.219) (-2247.998) [-2116.528] -- 0:11:11 392000 -- (-2220.986) (-2119.149) [-2131.472] (-2128.702) * (-2151.529) (-2127.115) (-2232.399) [-2126.090] -- 0:11:10 393000 -- (-2221.484) [-2114.028] (-2136.554) (-2145.504) * (-2164.951) [-2109.916] (-2217.125) (-2115.361) -- 0:11:10 394000 -- (-2217.401) [-2111.985] (-2135.640) (-2133.615) * (-2158.760) (-2114.849) (-2228.999) [-2120.206] -- 0:11:09 395000 -- (-2212.817) (-2129.438) (-2137.773) [-2113.980] * (-2123.147) (-2131.885) (-2233.916) [-2127.852] -- 0:11:07 Average standard deviation of split frequencies: 0.013386 396000 -- (-2191.746) (-2141.232) (-2147.027) [-2109.652] * (-2131.488) [-2116.371] (-2233.652) (-2145.157) -- 0:11:06 397000 -- (-2220.022) (-2132.644) [-2112.009] (-2128.958) * (-2145.426) (-2134.167) (-2221.026) [-2113.765] -- 0:11:05 398000 -- (-2227.298) (-2140.300) [-2119.436] (-2136.024) * [-2103.336] (-2130.199) (-2233.282) (-2131.170) -- 0:11:04 399000 -- (-2217.701) (-2162.203) [-2136.020] (-2147.396) * [-2106.127] (-2140.315) (-2221.152) (-2131.295) -- 0:11:02 400000 -- (-2210.915) (-2142.739) [-2118.169] (-2146.635) * [-2116.977] (-2131.627) (-2214.081) (-2145.979) -- 0:11:01 Average standard deviation of split frequencies: 0.013674 401000 -- (-2225.175) (-2154.557) [-2129.277] (-2137.689) * [-2123.985] (-2116.064) (-2195.954) (-2135.154) -- 0:11:00 402000 -- (-2229.164) (-2138.506) [-2133.414] (-2139.471) * [-2125.214] (-2123.091) (-2216.763) (-2135.992) -- 0:10:58 403000 -- (-2228.516) (-2137.011) [-2131.589] (-2127.080) * (-2134.794) [-2122.159] (-2225.368) (-2154.178) -- 0:10:57 404000 -- (-2224.251) (-2144.846) [-2121.237] (-2140.517) * [-2119.857] (-2118.134) (-2226.802) (-2146.570) -- 0:10:57 405000 -- (-2211.303) [-2124.613] (-2128.825) (-2137.618) * (-2137.784) [-2112.007] (-2207.317) (-2139.930) -- 0:10:56 Average standard deviation of split frequencies: 0.013252 406000 -- (-2219.704) (-2149.755) [-2119.422] (-2127.241) * [-2127.357] (-2123.872) (-2227.168) (-2144.944) -- 0:10:55 407000 -- (-2216.069) (-2129.097) (-2111.772) [-2120.972] * [-2124.071] (-2126.474) (-2222.489) (-2147.274) -- 0:10:54 408000 -- (-2221.933) (-2116.142) (-2152.070) [-2102.569] * [-2104.208] (-2138.667) (-2213.250) (-2151.401) -- 0:10:52 409000 -- (-2232.169) [-2116.776] (-2139.106) (-2106.624) * [-2104.258] (-2148.024) (-2208.329) (-2138.799) -- 0:10:51 410000 -- (-2237.440) [-2119.904] (-2130.681) (-2116.436) * [-2105.627] (-2136.912) (-2210.564) (-2133.815) -- 0:10:50 Average standard deviation of split frequencies: 0.012889 411000 -- (-2217.205) (-2130.805) [-2126.727] (-2117.894) * [-2110.731] (-2162.549) (-2222.286) (-2124.457) -- 0:10:50 412000 -- (-2228.670) (-2153.759) (-2125.713) [-2111.718] * [-2118.998] (-2130.522) (-2232.291) (-2133.708) -- 0:10:49 413000 -- (-2235.444) (-2129.807) [-2111.941] (-2142.877) * [-2120.145] (-2142.544) (-2225.507) (-2127.246) -- 0:10:48 414000 -- (-2227.016) (-2171.500) [-2110.000] (-2139.523) * [-2103.991] (-2131.918) (-2233.579) (-2130.476) -- 0:10:46 415000 -- (-2221.128) (-2140.062) [-2120.984] (-2133.343) * (-2110.628) (-2146.085) (-2233.156) [-2120.383] -- 0:10:45 Average standard deviation of split frequencies: 0.012938 416000 -- (-2248.753) (-2120.552) [-2117.233] (-2162.245) * (-2126.697) (-2146.799) (-2226.671) [-2124.219] -- 0:10:44 417000 -- (-2240.326) (-2116.269) [-2113.905] (-2137.751) * (-2122.630) (-2153.677) (-2211.095) [-2112.578] -- 0:10:43 418000 -- (-2231.205) (-2136.806) [-2133.945] (-2131.274) * [-2098.697] (-2141.634) (-2225.204) (-2108.100) -- 0:10:43 419000 -- (-2234.694) (-2131.488) [-2117.923] (-2142.150) * [-2118.626] (-2141.767) (-2218.794) (-2132.214) -- 0:10:42 420000 -- (-2226.304) (-2125.968) [-2109.554] (-2137.911) * [-2124.377] (-2125.606) (-2212.233) (-2133.264) -- 0:10:40 Average standard deviation of split frequencies: 0.013435 421000 -- (-2218.034) (-2119.550) [-2112.769] (-2138.878) * [-2117.946] (-2138.431) (-2214.518) (-2129.432) -- 0:10:39 422000 -- (-2220.709) [-2113.033] (-2127.649) (-2145.152) * (-2114.740) (-2143.480) (-2224.890) [-2138.696] -- 0:10:38 423000 -- (-2208.675) [-2115.815] (-2121.066) (-2175.723) * (-2122.931) [-2129.814] (-2222.902) (-2133.196) -- 0:10:37 424000 -- (-2217.465) (-2126.054) [-2108.939] (-2153.176) * (-2135.607) (-2130.365) (-2216.749) [-2116.739] -- 0:10:35 425000 -- (-2218.837) (-2123.591) [-2107.634] (-2132.009) * (-2123.420) [-2117.051] (-2196.234) (-2137.446) -- 0:10:34 Average standard deviation of split frequencies: 0.013353 426000 -- (-2206.433) (-2118.038) [-2112.580] (-2146.461) * (-2119.001) [-2107.341] (-2198.801) (-2147.411) -- 0:10:33 427000 -- (-2209.075) (-2122.156) [-2125.018] (-2125.478) * (-2136.734) [-2121.800] (-2185.756) (-2149.070) -- 0:10:33 428000 -- (-2222.045) [-2116.624] (-2124.093) (-2142.415) * [-2130.395] (-2117.923) (-2190.720) (-2157.062) -- 0:10:32 429000 -- (-2207.084) [-2099.201] (-2157.479) (-2113.128) * (-2111.681) [-2126.678] (-2200.766) (-2155.966) -- 0:10:30 430000 -- (-2236.952) (-2110.631) (-2142.523) [-2113.704] * [-2119.405] (-2147.946) (-2206.921) (-2154.811) -- 0:10:29 Average standard deviation of split frequencies: 0.013340 431000 -- (-2225.674) [-2115.998] (-2143.709) (-2133.679) * [-2112.462] (-2116.838) (-2217.912) (-2134.071) -- 0:10:28 432000 -- (-2222.118) (-2117.786) (-2134.032) [-2125.404] * [-2116.023] (-2154.788) (-2213.275) (-2127.713) -- 0:10:27 433000 -- (-2227.977) (-2114.067) (-2150.147) [-2134.078] * [-2102.559] (-2145.264) (-2200.809) (-2153.980) -- 0:10:25 434000 -- (-2243.842) (-2120.649) [-2118.948] (-2137.959) * [-2103.489] (-2126.853) (-2228.837) (-2151.481) -- 0:10:25 435000 -- (-2211.103) [-2122.801] (-2130.777) (-2141.620) * [-2105.522] (-2124.690) (-2224.225) (-2143.893) -- 0:10:24 Average standard deviation of split frequencies: 0.013375 436000 -- (-2216.806) [-2112.029] (-2123.674) (-2136.646) * [-2119.982] (-2138.449) (-2244.646) (-2137.397) -- 0:10:23 437000 -- (-2240.560) (-2135.712) (-2136.252) [-2110.221] * (-2126.989) [-2125.767] (-2240.664) (-2151.781) -- 0:10:22 438000 -- (-2230.972) (-2118.906) (-2153.234) [-2109.990] * [-2128.969] (-2128.377) (-2218.071) (-2141.470) -- 0:10:21 439000 -- (-2216.127) (-2134.447) (-2163.907) [-2105.098] * (-2124.518) [-2140.023] (-2218.354) (-2141.067) -- 0:10:19 440000 -- (-2211.178) (-2129.393) (-2144.833) [-2110.536] * [-2127.758] (-2131.277) (-2216.970) (-2141.156) -- 0:10:18 Average standard deviation of split frequencies: 0.013270 441000 -- (-2205.318) (-2126.152) (-2154.728) [-2112.348] * [-2132.273] (-2119.779) (-2206.283) (-2117.962) -- 0:10:17 442000 -- (-2207.338) (-2133.514) (-2141.240) [-2106.673] * [-2125.699] (-2136.744) (-2210.535) (-2142.018) -- 0:10:16 443000 -- (-2212.486) (-2148.474) (-2121.708) [-2110.456] * [-2135.838] (-2136.617) (-2202.628) (-2129.318) -- 0:10:14 444000 -- (-2222.298) (-2140.192) [-2107.289] (-2126.448) * [-2116.600] (-2150.936) (-2220.553) (-2153.454) -- 0:10:14 445000 -- (-2212.248) (-2146.791) [-2114.710] (-2137.501) * [-2115.662] (-2144.183) (-2217.345) (-2142.734) -- 0:10:13 Average standard deviation of split frequencies: 0.013369 446000 -- (-2230.544) (-2148.472) [-2115.640] (-2121.029) * [-2117.341] (-2140.983) (-2217.104) (-2133.633) -- 0:10:12 447000 -- (-2218.905) (-2138.606) [-2113.084] (-2112.420) * [-2109.215] (-2143.123) (-2208.149) (-2126.777) -- 0:10:11 448000 -- (-2216.654) (-2119.759) [-2121.349] (-2125.405) * (-2136.261) [-2123.182] (-2215.836) (-2127.967) -- 0:10:09 449000 -- (-2210.133) (-2132.889) [-2117.468] (-2119.066) * (-2139.713) [-2151.849] (-2212.297) (-2128.684) -- 0:10:08 450000 -- (-2202.946) (-2126.956) (-2141.467) [-2120.669] * (-2128.364) (-2122.596) (-2216.839) [-2127.264] -- 0:10:07 Average standard deviation of split frequencies: 0.013644 451000 -- (-2215.699) (-2137.381) (-2156.401) [-2109.512] * (-2119.139) (-2143.972) (-2207.894) [-2120.643] -- 0:10:06 452000 -- (-2217.519) (-2119.253) (-2131.677) [-2104.285] * (-2117.768) (-2150.248) (-2219.645) [-2131.833] -- 0:10:04 453000 -- (-2223.093) (-2131.679) (-2137.544) [-2109.369] * [-2115.872] (-2142.861) (-2219.954) (-2121.653) -- 0:10:03 454000 -- (-2230.105) [-2128.438] (-2150.752) (-2127.299) * [-2125.334] (-2147.730) (-2205.898) (-2130.177) -- 0:10:03 455000 -- (-2228.129) [-2109.276] (-2157.789) (-2127.840) * [-2138.847] (-2146.421) (-2206.112) (-2125.900) -- 0:10:02 Average standard deviation of split frequencies: 0.013563 456000 -- (-2220.366) [-2109.396] (-2149.806) (-2116.203) * (-2137.071) (-2143.285) (-2208.293) [-2110.109] -- 0:10:01 457000 -- (-2224.446) [-2120.583] (-2125.289) (-2127.984) * (-2151.129) [-2129.413] (-2221.504) (-2109.295) -- 0:10:00 458000 -- (-2209.424) (-2124.281) [-2122.461] (-2136.192) * (-2125.873) [-2125.344] (-2210.020) (-2110.234) -- 0:09:58 459000 -- (-2210.155) (-2147.713) [-2121.118] (-2139.125) * (-2135.933) [-2124.959] (-2223.592) (-2111.902) -- 0:09:57 460000 -- (-2206.655) (-2110.706) [-2114.241] (-2139.976) * (-2141.847) (-2138.636) (-2234.644) [-2114.881] -- 0:09:56 Average standard deviation of split frequencies: 0.013652 461000 -- (-2220.143) [-2117.658] (-2128.937) (-2134.937) * (-2114.030) (-2158.038) (-2241.425) [-2114.732] -- 0:09:55 462000 -- (-2216.433) [-2132.079] (-2140.245) (-2155.040) * [-2106.203] (-2138.035) (-2223.763) (-2141.062) -- 0:09:53 463000 -- (-2216.046) (-2128.930) (-2139.531) [-2124.868] * [-2099.629] (-2148.319) (-2210.839) (-2132.306) -- 0:09:52 464000 -- (-2214.067) (-2126.322) (-2140.215) [-2110.170] * [-2114.843] (-2150.381) (-2233.348) (-2127.691) -- 0:09:51 465000 -- (-2211.710) (-2117.198) (-2141.084) [-2104.277] * (-2137.912) (-2140.662) (-2235.015) [-2108.801] -- 0:09:50 Average standard deviation of split frequencies: 0.013712 466000 -- (-2221.097) (-2128.501) (-2159.218) [-2112.573] * (-2130.258) (-2137.935) (-2232.662) [-2112.437] -- 0:09:49 467000 -- (-2208.189) (-2123.381) (-2183.513) [-2113.665] * [-2122.309] (-2139.649) (-2217.183) (-2129.653) -- 0:09:47 468000 -- (-2218.620) (-2149.969) (-2142.219) [-2112.781] * [-2106.819] (-2139.072) (-2206.951) (-2130.129) -- 0:09:47 469000 -- (-2198.965) (-2134.960) (-2142.016) [-2110.995] * [-2119.896] (-2133.304) (-2207.188) (-2110.739) -- 0:09:46 470000 -- (-2208.611) (-2111.812) (-2146.401) [-2118.394] * [-2115.944] (-2130.753) (-2214.151) (-2138.105) -- 0:09:45 Average standard deviation of split frequencies: 0.014098 471000 -- (-2210.984) [-2116.694] (-2141.619) (-2127.140) * [-2118.562] (-2135.773) (-2205.699) (-2129.570) -- 0:09:44 472000 -- (-2203.141) [-2120.330] (-2197.085) (-2128.000) * (-2122.326) (-2136.268) (-2217.047) [-2110.583] -- 0:09:42 473000 -- (-2191.378) [-2114.241] (-2208.452) (-2114.776) * [-2124.138] (-2148.925) (-2225.590) (-2133.833) -- 0:09:41 474000 -- (-2195.772) (-2130.330) (-2205.969) [-2109.523] * (-2128.571) (-2149.132) (-2214.193) [-2124.809] -- 0:09:40 475000 -- (-2218.849) [-2129.411] (-2194.367) (-2122.225) * [-2116.058] (-2136.322) (-2223.627) (-2134.929) -- 0:09:39 Average standard deviation of split frequencies: 0.014188 476000 -- (-2212.530) [-2122.330] (-2212.359) (-2107.134) * [-2110.589] (-2141.311) (-2231.386) (-2138.563) -- 0:09:37 477000 -- (-2208.098) [-2121.390] (-2215.249) (-2116.241) * [-2116.886] (-2146.240) (-2199.254) (-2138.238) -- 0:09:37 478000 -- (-2212.349) [-2127.775] (-2210.393) (-2123.856) * (-2114.365) (-2155.964) (-2211.674) [-2131.609] -- 0:09:36 479000 -- (-2238.171) [-2126.913] (-2208.679) (-2120.093) * [-2124.969] (-2134.245) (-2203.647) (-2154.558) -- 0:09:35 480000 -- (-2219.003) (-2132.195) (-2204.027) [-2117.053] * [-2111.342] (-2153.533) (-2192.952) (-2171.807) -- 0:09:34 Average standard deviation of split frequencies: 0.013957 481000 -- (-2210.395) (-2134.387) (-2192.964) [-2111.076] * [-2105.287] (-2142.169) (-2198.986) (-2146.790) -- 0:09:32 482000 -- (-2233.150) (-2149.943) (-2197.650) [-2097.626] * [-2103.053] (-2153.898) (-2203.775) (-2128.031) -- 0:09:31 483000 -- (-2217.699) (-2129.701) (-2185.240) [-2101.457] * [-2103.753] (-2141.526) (-2207.003) (-2129.776) -- 0:09:30 484000 -- (-2234.199) (-2127.555) (-2183.444) [-2112.408] * [-2100.983] (-2118.556) (-2221.469) (-2140.870) -- 0:09:29 485000 -- (-2220.056) (-2117.632) (-2181.365) [-2108.117] * (-2113.771) (-2130.849) (-2212.369) [-2118.101] -- 0:09:29 Average standard deviation of split frequencies: 0.013558 486000 -- (-2239.832) [-2120.938] (-2178.526) (-2111.495) * [-2115.484] (-2135.574) (-2206.182) (-2115.092) -- 0:09:27 487000 -- (-2236.174) (-2113.394) (-2198.146) [-2128.635] * (-2134.402) (-2128.522) (-2214.219) [-2110.206] -- 0:09:26 488000 -- (-2226.409) [-2120.429] (-2184.943) (-2133.217) * [-2120.255] (-2139.636) (-2215.738) (-2126.933) -- 0:09:25 489000 -- (-2226.030) [-2115.351] (-2184.109) (-2120.295) * [-2131.066] (-2152.403) (-2210.982) (-2128.337) -- 0:09:24 490000 -- (-2214.822) (-2115.291) (-2191.442) [-2114.266] * (-2119.374) (-2136.315) (-2217.977) [-2125.925] -- 0:09:23 Average standard deviation of split frequencies: 0.013292 491000 -- (-2234.125) (-2127.692) (-2191.813) [-2118.438] * [-2114.921] (-2129.926) (-2198.584) (-2126.383) -- 0:09:21 492000 -- (-2242.139) [-2126.149] (-2197.763) (-2122.966) * [-2109.910] (-2123.361) (-2215.871) (-2130.189) -- 0:09:20 493000 -- (-2238.020) [-2135.145] (-2196.395) (-2121.953) * (-2120.777) (-2138.799) (-2216.338) [-2106.206] -- 0:09:20 494000 -- (-2229.141) (-2135.316) (-2204.259) [-2113.933] * (-2146.202) [-2106.438] (-2207.253) (-2102.894) -- 0:09:19 495000 -- (-2217.181) [-2136.094] (-2205.770) (-2139.489) * (-2151.906) (-2123.211) (-2228.998) [-2114.871] -- 0:09:18 Average standard deviation of split frequencies: 0.013151 496000 -- (-2212.000) (-2121.444) (-2199.562) [-2143.715] * (-2150.041) (-2131.091) (-2221.336) [-2113.262] -- 0:09:16 497000 -- (-2215.176) [-2120.784] (-2191.277) (-2132.425) * (-2144.700) [-2111.244] (-2221.258) (-2134.096) -- 0:09:15 498000 -- (-2220.348) [-2127.408] (-2199.280) (-2131.679) * (-2128.606) [-2102.578] (-2224.250) (-2139.815) -- 0:09:14 499000 -- (-2222.525) [-2137.551] (-2196.807) (-2129.229) * (-2131.689) [-2100.300] (-2216.874) (-2154.947) -- 0:09:13 500000 -- (-2229.954) [-2118.630] (-2188.527) (-2130.473) * (-2138.850) [-2123.243] (-2222.317) (-2123.662) -- 0:09:12 Average standard deviation of split frequencies: 0.013683 501000 -- (-2231.521) [-2118.011] (-2194.501) (-2121.255) * (-2160.876) [-2117.988] (-2202.510) (-2141.761) -- 0:09:11 502000 -- (-2221.767) [-2118.461] (-2196.471) (-2148.505) * (-2152.190) [-2120.272] (-2209.791) (-2139.327) -- 0:09:10 503000 -- (-2225.443) [-2117.668] (-2186.845) (-2151.863) * (-2125.419) [-2115.277] (-2213.358) (-2147.070) -- 0:09:09 504000 -- (-2234.786) [-2120.624] (-2190.311) (-2156.020) * (-2132.093) [-2125.993] (-2213.001) (-2138.755) -- 0:09:08 505000 -- (-2241.607) [-2124.481] (-2207.950) (-2138.859) * (-2129.376) [-2107.104] (-2226.407) (-2141.938) -- 0:09:06 Average standard deviation of split frequencies: 0.013904 506000 -- (-2221.633) (-2122.335) (-2221.331) [-2124.977] * (-2132.825) (-2105.985) (-2216.938) [-2128.375] -- 0:09:05 507000 -- (-2199.165) (-2126.009) (-2196.152) [-2125.500] * (-2162.377) [-2116.493] (-2229.014) (-2126.767) -- 0:09:04 508000 -- (-2212.521) (-2133.226) (-2175.296) [-2123.880] * (-2165.095) [-2111.460] (-2215.974) (-2138.283) -- 0:09:03 509000 -- (-2203.790) [-2120.617] (-2184.510) (-2121.593) * (-2156.293) [-2112.579] (-2240.178) (-2127.497) -- 0:09:02 510000 -- (-2214.553) [-2109.058] (-2188.726) (-2128.560) * (-2142.982) [-2109.804] (-2205.843) (-2150.761) -- 0:09:01 Average standard deviation of split frequencies: 0.014174 511000 -- (-2211.346) [-2105.184] (-2203.675) (-2123.760) * (-2150.466) [-2112.848] (-2217.359) (-2126.438) -- 0:09:00 512000 -- (-2219.988) [-2106.437] (-2187.922) (-2136.157) * (-2142.548) [-2112.237] (-2220.206) (-2126.535) -- 0:08:59 513000 -- (-2203.590) [-2115.366] (-2195.195) (-2125.159) * (-2129.150) (-2123.567) (-2236.354) [-2119.921] -- 0:08:58 514000 -- (-2204.249) (-2127.373) (-2168.851) [-2123.773] * (-2143.199) [-2109.272] (-2229.300) (-2121.153) -- 0:08:57 515000 -- (-2207.763) (-2124.243) (-2190.743) [-2117.652] * (-2156.210) [-2121.750] (-2228.582) (-2146.326) -- 0:08:55 Average standard deviation of split frequencies: 0.013813 516000 -- (-2199.142) (-2112.621) (-2199.720) [-2120.425] * (-2137.854) [-2130.286] (-2227.953) (-2129.208) -- 0:08:54 517000 -- (-2202.945) [-2118.998] (-2204.052) (-2126.248) * (-2138.980) [-2123.669] (-2212.123) (-2136.907) -- 0:08:53 518000 -- (-2189.032) [-2117.406] (-2200.890) (-2110.833) * (-2117.499) [-2117.815] (-2218.462) (-2157.706) -- 0:08:52 519000 -- (-2198.743) (-2117.362) (-2226.487) [-2123.802] * [-2122.072] (-2135.552) (-2218.728) (-2144.249) -- 0:08:51 520000 -- (-2201.873) (-2115.560) (-2205.951) [-2131.472] * [-2103.823] (-2126.168) (-2233.168) (-2145.000) -- 0:08:49 Average standard deviation of split frequencies: 0.013758 521000 -- (-2213.778) (-2112.293) (-2203.867) [-2110.143] * [-2110.089] (-2120.489) (-2225.717) (-2172.177) -- 0:08:48 522000 -- (-2185.384) (-2128.091) (-2206.182) [-2112.082] * [-2117.031] (-2149.865) (-2236.007) (-2146.853) -- 0:08:47 523000 -- (-2215.056) [-2116.978] (-2185.975) (-2105.305) * [-2107.029] (-2140.900) (-2230.959) (-2156.407) -- 0:08:46 524000 -- (-2237.793) [-2122.545] (-2197.896) (-2117.938) * [-2112.626] (-2127.302) (-2226.111) (-2152.410) -- 0:08:45 525000 -- (-2220.498) (-2117.470) (-2196.169) [-2117.975] * [-2104.518] (-2136.002) (-2241.141) (-2128.615) -- 0:08:43 Average standard deviation of split frequencies: 0.013472 526000 -- (-2221.569) (-2114.631) (-2184.257) [-2120.465] * (-2125.643) (-2129.734) (-2224.880) [-2110.471] -- 0:08:43 527000 -- (-2212.079) [-2110.285] (-2214.484) (-2110.607) * (-2136.721) [-2133.171] (-2206.713) (-2126.750) -- 0:08:42 528000 -- (-2196.244) (-2124.026) (-2200.438) [-2122.228] * (-2129.980) [-2111.420] (-2209.696) (-2133.559) -- 0:08:41 529000 -- (-2225.316) (-2112.679) (-2207.144) [-2105.036] * [-2117.310] (-2121.200) (-2216.985) (-2117.408) -- 0:08:39 530000 -- (-2204.088) (-2123.140) (-2210.489) [-2100.230] * (-2126.962) [-2113.384] (-2209.761) (-2118.288) -- 0:08:38 Average standard deviation of split frequencies: 0.013268 531000 -- (-2189.547) [-2120.596] (-2174.771) (-2110.784) * (-2146.751) [-2107.273] (-2223.319) (-2122.213) -- 0:08:37 532000 -- (-2204.174) [-2113.107] (-2199.341) (-2116.306) * (-2138.132) [-2108.130] (-2201.601) (-2150.468) -- 0:08:36 533000 -- (-2204.715) [-2125.365] (-2209.252) (-2117.215) * (-2133.306) [-2113.448] (-2216.500) (-2135.247) -- 0:08:35 534000 -- (-2203.484) (-2126.275) (-2199.325) [-2110.531] * (-2144.037) [-2106.976] (-2209.133) (-2131.607) -- 0:08:33 535000 -- (-2202.527) (-2124.103) (-2197.021) [-2109.192] * (-2156.945) (-2136.295) (-2205.747) [-2125.463] -- 0:08:32 Average standard deviation of split frequencies: 0.013277 536000 -- (-2208.075) [-2129.574] (-2198.755) (-2123.512) * (-2125.563) [-2132.199] (-2221.344) (-2159.696) -- 0:08:32 537000 -- (-2195.113) (-2139.427) (-2199.581) [-2124.043] * [-2129.749] (-2136.130) (-2214.698) (-2157.263) -- 0:08:31 538000 -- (-2216.757) [-2124.385] (-2193.534) (-2133.938) * [-2123.258] (-2142.832) (-2219.059) (-2170.834) -- 0:08:30 539000 -- (-2199.509) (-2128.821) (-2176.102) [-2130.867] * [-2124.688] (-2133.366) (-2219.317) (-2142.599) -- 0:08:28 540000 -- (-2197.978) (-2114.537) (-2182.419) [-2107.481] * [-2112.321] (-2130.113) (-2240.187) (-2147.537) -- 0:08:27 Average standard deviation of split frequencies: 0.012919 541000 -- (-2195.851) (-2116.883) (-2212.511) [-2115.110] * [-2123.761] (-2128.127) (-2228.213) (-2136.717) -- 0:08:26 542000 -- (-2222.492) [-2110.513] (-2204.339) (-2119.940) * [-2115.099] (-2115.474) (-2216.956) (-2133.989) -- 0:08:25 543000 -- (-2214.091) [-2113.937] (-2182.876) (-2110.310) * (-2122.647) [-2114.856] (-2230.392) (-2151.778) -- 0:08:24 544000 -- (-2218.036) [-2123.667] (-2173.583) (-2129.423) * (-2127.789) [-2104.647] (-2205.151) (-2126.089) -- 0:08:23 545000 -- (-2201.293) [-2111.180] (-2173.707) (-2114.290) * (-2138.594) [-2111.080] (-2214.899) (-2135.060) -- 0:08:22 Average standard deviation of split frequencies: 0.012886 546000 -- (-2191.000) (-2115.815) (-2198.118) [-2116.167] * (-2165.062) [-2107.633] (-2221.112) (-2122.352) -- 0:08:21 547000 -- (-2194.259) (-2138.897) (-2182.740) [-2126.681] * (-2134.330) [-2117.114] (-2241.809) (-2129.778) -- 0:08:20 548000 -- (-2204.333) [-2115.249] (-2192.411) (-2119.962) * (-2131.164) (-2128.721) (-2210.441) [-2124.269] -- 0:08:19 549000 -- (-2196.010) [-2118.602] (-2189.134) (-2124.831) * (-2121.034) [-2115.430] (-2225.439) (-2147.830) -- 0:08:17 550000 -- (-2197.617) [-2114.935] (-2192.502) (-2122.619) * (-2132.123) [-2113.254] (-2235.269) (-2156.347) -- 0:08:16 Average standard deviation of split frequencies: 0.012915 551000 -- (-2209.065) [-2105.695] (-2200.095) (-2124.093) * (-2139.395) [-2107.410] (-2233.352) (-2160.342) -- 0:08:15 552000 -- (-2197.612) [-2109.983] (-2188.584) (-2144.042) * (-2137.307) [-2121.919] (-2227.204) (-2161.783) -- 0:08:14 553000 -- (-2202.064) [-2123.613] (-2188.846) (-2145.568) * (-2130.815) [-2118.487] (-2218.358) (-2144.575) -- 0:08:13 554000 -- (-2193.924) [-2115.747] (-2191.356) (-2155.502) * [-2117.713] (-2120.580) (-2204.331) (-2134.629) -- 0:08:12 555000 -- (-2196.461) [-2112.318] (-2203.316) (-2156.669) * [-2122.180] (-2111.247) (-2220.899) (-2136.570) -- 0:08:11 Average standard deviation of split frequencies: 0.013064 556000 -- (-2201.695) [-2111.066] (-2188.178) (-2136.105) * (-2120.281) [-2116.188] (-2211.368) (-2145.247) -- 0:08:10 557000 -- (-2201.301) [-2117.214] (-2190.326) (-2126.189) * (-2124.984) [-2111.351] (-2224.072) (-2143.166) -- 0:08:09 558000 -- (-2216.027) (-2116.855) (-2193.061) [-2117.746] * (-2120.474) [-2106.297] (-2217.315) (-2141.174) -- 0:08:07 559000 -- (-2201.971) [-2101.693] (-2209.066) (-2129.214) * (-2102.419) [-2109.884] (-2208.824) (-2142.894) -- 0:08:06 560000 -- (-2214.834) [-2121.512] (-2189.172) (-2125.218) * (-2113.634) (-2128.715) (-2210.415) [-2121.557] -- 0:08:05 Average standard deviation of split frequencies: 0.012919 561000 -- (-2219.123) (-2135.731) (-2185.460) [-2120.560] * [-2116.176] (-2138.887) (-2202.680) (-2119.019) -- 0:08:05 562000 -- (-2195.360) [-2111.333] (-2197.562) (-2119.547) * (-2119.857) [-2113.218] (-2214.061) (-2137.482) -- 0:08:03 563000 -- (-2185.224) [-2118.901] (-2188.679) (-2117.826) * [-2126.329] (-2123.343) (-2217.147) (-2148.456) -- 0:08:02 564000 -- (-2186.344) [-2113.288] (-2192.613) (-2115.597) * (-2122.147) [-2123.872] (-2211.611) (-2151.644) -- 0:08:01 565000 -- (-2190.822) [-2110.246] (-2187.718) (-2124.650) * (-2115.773) [-2108.300] (-2208.160) (-2140.050) -- 0:08:00 Average standard deviation of split frequencies: 0.012708 566000 -- (-2209.439) (-2108.837) (-2194.898) [-2116.616] * (-2129.439) [-2105.065] (-2211.041) (-2166.117) -- 0:07:59 567000 -- (-2209.164) [-2123.804] (-2195.518) (-2123.564) * [-2123.009] (-2108.489) (-2224.996) (-2158.846) -- 0:07:58 568000 -- (-2199.249) (-2127.166) (-2197.601) [-2112.350] * (-2143.590) [-2107.747] (-2206.872) (-2161.580) -- 0:07:56 569000 -- (-2201.200) (-2126.391) (-2187.263) [-2111.854] * (-2135.940) [-2104.836] (-2200.380) (-2141.272) -- 0:07:56 570000 -- (-2189.115) [-2121.930] (-2181.231) (-2116.760) * (-2139.753) [-2109.941] (-2208.416) (-2123.248) -- 0:07:55 Average standard deviation of split frequencies: 0.012613 571000 -- (-2210.850) [-2121.843] (-2187.006) (-2122.046) * (-2134.534) [-2116.120] (-2197.320) (-2130.448) -- 0:07:54 572000 -- (-2213.248) (-2125.086) (-2184.743) [-2126.440] * (-2138.008) [-2115.236] (-2220.389) (-2142.987) -- 0:07:52 573000 -- (-2204.858) (-2156.172) (-2190.322) [-2127.196] * (-2138.431) [-2116.565] (-2211.311) (-2150.962) -- 0:07:51 574000 -- (-2211.226) (-2137.800) (-2204.734) [-2111.841] * (-2133.520) [-2127.922] (-2204.701) (-2139.467) -- 0:07:50 575000 -- (-2203.908) (-2142.109) (-2192.670) [-2129.618] * (-2133.037) [-2123.752] (-2210.751) (-2156.765) -- 0:07:49 Average standard deviation of split frequencies: 0.012399 576000 -- (-2201.603) (-2146.216) (-2190.914) [-2132.939] * [-2117.554] (-2134.001) (-2205.152) (-2155.181) -- 0:07:48 577000 -- (-2207.068) (-2131.362) (-2186.999) [-2134.168] * [-2105.723] (-2134.118) (-2221.070) (-2142.834) -- 0:07:47 578000 -- (-2189.972) (-2130.793) (-2211.268) [-2135.588] * [-2126.381] (-2141.380) (-2192.864) (-2130.559) -- 0:07:46 579000 -- (-2195.886) [-2120.498] (-2206.627) (-2122.797) * (-2125.073) (-2134.320) (-2216.076) [-2119.934] -- 0:07:45 580000 -- (-2185.019) (-2107.592) (-2189.838) [-2119.188] * (-2139.009) (-2138.048) (-2201.025) [-2116.295] -- 0:07:44 Average standard deviation of split frequencies: 0.012099 581000 -- (-2208.219) [-2117.678] (-2182.651) (-2136.953) * (-2144.308) [-2122.038] (-2212.288) (-2156.241) -- 0:07:42 582000 -- (-2195.665) (-2120.358) (-2196.473) [-2112.641] * (-2139.695) [-2108.388] (-2224.281) (-2129.712) -- 0:07:41 583000 -- (-2187.632) (-2133.624) (-2192.322) [-2109.777] * (-2131.829) [-2114.608] (-2226.508) (-2163.899) -- 0:07:40 584000 -- (-2191.829) (-2141.695) (-2196.566) [-2104.160] * (-2129.307) [-2117.214] (-2235.027) (-2147.316) -- 0:07:39 585000 -- (-2199.029) (-2122.578) (-2184.374) [-2104.198] * [-2121.947] (-2115.715) (-2239.772) (-2172.982) -- 0:07:38 Average standard deviation of split frequencies: 0.011885 586000 -- (-2194.170) (-2124.849) (-2189.494) [-2098.198] * (-2133.719) [-2119.347] (-2225.198) (-2151.916) -- 0:07:37 587000 -- (-2183.025) [-2117.477] (-2197.108) (-2116.113) * (-2131.865) [-2121.151] (-2231.870) (-2146.227) -- 0:07:35 588000 -- (-2180.829) [-2126.429] (-2209.194) (-2123.208) * (-2135.044) [-2115.752] (-2230.262) (-2145.058) -- 0:07:34 589000 -- (-2175.421) (-2136.940) (-2202.838) [-2101.167] * (-2131.624) [-2118.195] (-2204.646) (-2139.284) -- 0:07:33 590000 -- (-2176.910) (-2116.486) (-2196.508) [-2095.613] * [-2120.842] (-2147.083) (-2226.280) (-2120.379) -- 0:07:33 Average standard deviation of split frequencies: 0.011746 591000 -- (-2189.004) (-2133.013) (-2199.756) [-2111.150] * [-2113.788] (-2133.886) (-2229.862) (-2123.489) -- 0:07:31 592000 -- (-2191.672) (-2113.731) (-2191.547) [-2118.963] * (-2117.079) (-2143.350) (-2206.593) [-2126.606] -- 0:07:30 593000 -- (-2194.781) (-2134.130) (-2189.077) [-2118.394] * (-2136.087) (-2146.961) (-2215.049) [-2111.622] -- 0:07:29 594000 -- (-2197.866) (-2125.745) (-2176.040) [-2120.361] * (-2110.424) (-2156.551) (-2216.629) [-2106.592] -- 0:07:28 595000 -- (-2213.441) (-2133.248) (-2194.237) [-2105.919] * (-2126.082) (-2157.796) (-2210.880) [-2120.865] -- 0:07:27 Average standard deviation of split frequencies: 0.011993 596000 -- (-2204.830) (-2140.456) (-2187.994) [-2119.100] * (-2124.682) (-2182.645) (-2194.453) [-2121.248] -- 0:07:26 597000 -- (-2197.825) (-2116.127) (-2187.769) [-2112.082] * (-2121.753) (-2169.285) (-2204.338) [-2116.496] -- 0:07:24 598000 -- (-2192.008) (-2125.925) (-2183.680) [-2107.712] * (-2124.671) (-2186.150) (-2196.848) [-2113.507] -- 0:07:23 599000 -- (-2222.622) (-2121.219) (-2215.561) [-2121.036] * (-2125.470) (-2158.088) (-2213.231) [-2118.519] -- 0:07:22 600000 -- (-2202.435) (-2135.144) (-2194.333) [-2104.327] * (-2145.342) (-2135.412) (-2212.932) [-2121.732] -- 0:07:21 Average standard deviation of split frequencies: 0.011772 601000 -- (-2184.285) [-2135.885] (-2207.493) (-2116.546) * [-2124.194] (-2137.965) (-2210.432) (-2119.836) -- 0:07:20 602000 -- (-2172.188) (-2123.924) (-2190.606) [-2100.129] * (-2146.034) (-2135.314) (-2223.260) [-2112.943] -- 0:07:19 603000 -- (-2198.283) (-2127.830) (-2188.015) [-2105.852] * (-2146.873) (-2128.904) (-2222.147) [-2112.138] -- 0:07:18 604000 -- (-2202.250) [-2107.224] (-2192.216) (-2114.561) * (-2129.806) [-2129.257] (-2227.459) (-2112.068) -- 0:07:17 605000 -- (-2178.065) (-2135.717) (-2199.310) [-2107.512] * (-2128.792) [-2124.909] (-2229.659) (-2143.421) -- 0:07:16 Average standard deviation of split frequencies: 0.011559 606000 -- (-2186.563) (-2108.996) (-2198.191) [-2123.959] * [-2122.816] (-2120.758) (-2216.356) (-2161.721) -- 0:07:14 607000 -- (-2177.050) [-2104.686] (-2205.255) (-2129.662) * [-2115.824] (-2121.687) (-2212.661) (-2158.406) -- 0:07:13 608000 -- (-2194.563) [-2112.778] (-2198.651) (-2116.308) * (-2124.104) [-2109.114] (-2188.504) (-2164.521) -- 0:07:13 609000 -- (-2185.727) (-2102.996) (-2207.860) [-2105.015] * [-2117.707] (-2124.555) (-2200.835) (-2157.983) -- 0:07:12 610000 -- (-2196.251) [-2112.550] (-2200.871) (-2127.119) * (-2126.961) [-2119.897] (-2206.917) (-2122.191) -- 0:07:10 Average standard deviation of split frequencies: 0.011470 611000 -- (-2198.346) (-2117.571) (-2198.717) [-2110.276] * (-2132.973) [-2116.366] (-2195.982) (-2120.527) -- 0:07:09 612000 -- (-2189.767) (-2115.361) (-2200.388) [-2105.379] * (-2140.876) (-2131.513) (-2248.920) [-2110.622] -- 0:07:08 613000 -- (-2190.011) (-2110.903) (-2215.534) [-2111.653] * (-2148.445) [-2132.420] (-2218.543) (-2105.007) -- 0:07:07 614000 -- (-2205.126) (-2112.827) (-2229.758) [-2115.930] * (-2153.438) (-2113.065) (-2209.743) [-2113.015] -- 0:07:06 615000 -- (-2203.557) (-2129.700) (-2207.666) [-2115.194] * [-2115.579] (-2133.440) (-2219.926) (-2113.963) -- 0:07:05 Average standard deviation of split frequencies: 0.011188 616000 -- (-2207.198) [-2110.652] (-2202.332) (-2121.711) * (-2104.635) (-2138.087) (-2202.086) [-2117.069] -- 0:07:03 617000 -- (-2200.506) [-2105.329] (-2207.473) (-2120.183) * (-2109.917) (-2151.592) (-2220.720) [-2122.585] -- 0:07:02 618000 -- (-2208.970) [-2112.391] (-2197.225) (-2114.291) * [-2115.131] (-2130.273) (-2256.961) (-2124.386) -- 0:07:02 619000 -- (-2208.380) (-2127.569) (-2196.539) [-2119.712] * [-2117.082] (-2135.130) (-2232.143) (-2123.420) -- 0:07:01 620000 -- (-2201.599) (-2129.733) (-2198.053) [-2104.111] * [-2111.545] (-2126.167) (-2229.999) (-2142.562) -- 0:06:59 Average standard deviation of split frequencies: 0.011475 621000 -- (-2205.774) (-2122.048) (-2190.668) [-2098.780] * [-2109.014] (-2154.383) (-2221.656) (-2135.890) -- 0:06:58 622000 -- (-2213.722) (-2119.086) (-2197.882) [-2124.693] * (-2111.801) (-2146.873) (-2214.620) [-2122.247] -- 0:06:57 623000 -- (-2213.217) (-2118.069) (-2212.778) [-2128.477] * [-2108.703] (-2143.342) (-2237.985) (-2123.346) -- 0:06:56 624000 -- (-2207.533) [-2110.518] (-2217.100) (-2109.870) * (-2122.597) (-2148.145) (-2212.761) [-2110.553] -- 0:06:55 625000 -- (-2196.029) (-2122.340) (-2195.265) [-2110.423] * (-2138.526) (-2127.104) (-2220.092) [-2112.800] -- 0:06:54 Average standard deviation of split frequencies: 0.011814 626000 -- (-2198.021) [-2116.094] (-2179.047) (-2109.407) * (-2127.206) [-2127.134] (-2219.364) (-2131.000) -- 0:06:53 627000 -- (-2187.481) (-2113.751) (-2193.590) [-2111.776] * (-2120.098) [-2112.231] (-2212.081) (-2138.094) -- 0:06:52 628000 -- (-2196.780) (-2114.542) (-2180.655) [-2102.410] * (-2121.557) [-2102.683] (-2237.773) (-2142.438) -- 0:06:51 629000 -- (-2201.231) (-2116.073) (-2172.236) [-2109.578] * (-2127.864) [-2110.581] (-2221.340) (-2148.177) -- 0:06:49 630000 -- (-2194.315) [-2110.893] (-2192.330) (-2109.358) * [-2119.107] (-2099.520) (-2225.866) (-2167.921) -- 0:06:48 Average standard deviation of split frequencies: 0.011734 631000 -- (-2170.004) [-2117.467] (-2179.562) (-2130.032) * (-2128.225) [-2125.494] (-2222.294) (-2164.173) -- 0:06:47 632000 -- (-2182.579) [-2108.154] (-2187.537) (-2120.373) * (-2124.209) [-2126.053] (-2213.062) (-2159.205) -- 0:06:46 633000 -- (-2192.829) [-2107.837] (-2181.069) (-2136.127) * (-2134.108) [-2120.515] (-2212.859) (-2145.631) -- 0:06:45 634000 -- (-2196.116) [-2107.272] (-2202.696) (-2125.678) * (-2130.618) [-2112.892] (-2214.531) (-2143.715) -- 0:06:44 635000 -- (-2185.550) [-2110.223] (-2197.361) (-2130.785) * (-2131.449) [-2104.499] (-2187.427) (-2154.619) -- 0:06:43 Average standard deviation of split frequencies: 0.011843 636000 -- (-2198.995) [-2142.312] (-2185.612) (-2142.331) * (-2133.919) [-2109.648] (-2204.788) (-2142.635) -- 0:06:42 637000 -- (-2173.545) (-2135.541) (-2190.977) [-2124.231] * (-2122.637) [-2115.613] (-2209.835) (-2158.165) -- 0:06:41 638000 -- (-2178.679) (-2126.423) (-2208.657) [-2131.406] * [-2106.412] (-2119.764) (-2206.502) (-2138.224) -- 0:06:40 639000 -- (-2187.754) (-2128.974) (-2201.355) [-2122.497] * [-2110.720] (-2124.878) (-2218.614) (-2140.477) -- 0:06:38 640000 -- (-2198.038) (-2127.354) (-2190.340) [-2122.310] * [-2111.687] (-2125.380) (-2209.125) (-2150.012) -- 0:06:37 Average standard deviation of split frequencies: 0.011701 641000 -- (-2206.491) (-2127.308) (-2212.778) [-2129.617] * [-2113.038] (-2119.529) (-2224.559) (-2150.287) -- 0:06:37 642000 -- (-2193.908) (-2135.095) (-2205.471) [-2119.831] * [-2110.975] (-2121.466) (-2217.388) (-2137.218) -- 0:06:35 643000 -- (-2185.241) (-2131.223) (-2195.321) [-2113.756] * (-2130.275) [-2114.020] (-2223.106) (-2139.895) -- 0:06:34 644000 -- (-2196.787) (-2113.102) (-2209.074) [-2106.545] * (-2132.605) [-2123.404] (-2213.748) (-2139.443) -- 0:06:33 645000 -- (-2203.582) (-2116.966) (-2211.710) [-2101.503] * (-2118.912) [-2117.224] (-2215.500) (-2149.970) -- 0:06:32 Average standard deviation of split frequencies: 0.011390 646000 -- (-2201.690) (-2125.324) (-2198.421) [-2104.835] * (-2130.128) [-2132.595] (-2238.739) (-2146.456) -- 0:06:31 647000 -- (-2200.940) (-2125.828) (-2191.635) [-2108.571] * [-2119.005] (-2114.533) (-2225.828) (-2152.981) -- 0:06:30 648000 -- (-2209.807) [-2124.544] (-2205.422) (-2110.686) * (-2127.637) [-2122.051] (-2210.169) (-2133.891) -- 0:06:28 649000 -- (-2215.888) [-2120.188] (-2189.175) (-2129.063) * (-2151.142) (-2138.053) (-2222.846) [-2134.832] -- 0:06:28 650000 -- (-2218.383) (-2122.204) (-2181.534) [-2120.190] * (-2142.887) [-2129.695] (-2238.608) (-2125.676) -- 0:06:27 Average standard deviation of split frequencies: 0.011143 651000 -- (-2201.116) (-2136.885) (-2181.230) [-2121.353] * (-2134.486) [-2115.898] (-2228.353) (-2137.434) -- 0:06:25 652000 -- (-2222.348) (-2133.505) (-2186.357) [-2112.715] * (-2138.075) (-2119.415) (-2219.178) [-2118.301] -- 0:06:24 653000 -- (-2196.879) (-2126.045) (-2174.519) [-2118.265] * (-2149.902) [-2115.276] (-2224.356) (-2129.712) -- 0:06:23 654000 -- (-2181.149) [-2112.409] (-2178.464) (-2125.560) * (-2128.917) [-2130.612] (-2202.092) (-2121.117) -- 0:06:22 655000 -- (-2189.565) [-2114.824] (-2171.341) (-2117.102) * (-2130.647) (-2129.833) (-2220.296) [-2120.039] -- 0:06:21 Average standard deviation of split frequencies: 0.011068 656000 -- (-2210.737) (-2110.320) (-2199.640) [-2098.143] * (-2146.730) [-2120.933] (-2221.027) (-2126.186) -- 0:06:20 657000 -- (-2197.106) (-2120.628) (-2193.554) [-2120.435] * (-2167.313) [-2114.175] (-2218.291) (-2138.000) -- 0:06:19 658000 -- (-2206.089) (-2141.352) (-2192.704) [-2112.188] * (-2137.018) (-2115.439) (-2197.047) [-2119.612] -- 0:06:17 659000 -- (-2206.407) (-2134.692) (-2193.498) [-2116.017] * (-2161.382) [-2110.024] (-2196.843) (-2139.149) -- 0:06:16 660000 -- (-2208.427) [-2117.548] (-2198.225) (-2124.431) * (-2158.531) [-2110.219] (-2199.477) (-2127.936) -- 0:06:15 Average standard deviation of split frequencies: 0.011137 661000 -- (-2204.263) [-2104.395] (-2198.619) (-2133.164) * (-2139.558) (-2118.232) (-2211.966) [-2116.702] -- 0:06:14 662000 -- (-2189.120) (-2108.934) (-2204.843) [-2128.294] * (-2144.207) [-2107.143] (-2219.979) (-2122.957) -- 0:06:13 663000 -- (-2203.241) [-2108.076] (-2206.473) (-2137.259) * (-2140.894) [-2118.176] (-2212.275) (-2130.548) -- 0:06:12 664000 -- (-2201.291) [-2105.568] (-2191.507) (-2128.690) * (-2121.892) [-2109.565] (-2217.198) (-2131.513) -- 0:06:11 665000 -- (-2186.468) [-2100.727] (-2191.070) (-2136.009) * [-2134.812] (-2125.728) (-2198.960) (-2130.312) -- 0:06:10 Average standard deviation of split frequencies: 0.010959 666000 -- (-2175.890) [-2107.235] (-2200.236) (-2119.972) * (-2118.710) [-2118.068] (-2204.275) (-2130.542) -- 0:06:09 667000 -- (-2184.938) [-2100.278] (-2195.968) (-2121.035) * (-2120.493) [-2117.501] (-2230.097) (-2132.015) -- 0:06:07 668000 -- (-2199.942) [-2106.109] (-2191.649) (-2123.158) * (-2133.242) [-2109.981] (-2231.827) (-2140.785) -- 0:06:06 669000 -- (-2189.539) [-2114.101] (-2185.879) (-2123.993) * (-2133.768) [-2113.486] (-2231.664) (-2124.934) -- 0:06:05 670000 -- (-2205.921) (-2126.386) (-2202.113) [-2126.585] * (-2131.615) [-2102.421] (-2226.357) (-2126.657) -- 0:06:04 Average standard deviation of split frequencies: 0.010945 671000 -- (-2189.816) (-2131.673) (-2184.820) [-2125.792] * (-2132.453) [-2112.984] (-2226.471) (-2132.542) -- 0:06:03 672000 -- (-2199.763) (-2135.457) (-2173.514) [-2121.413] * [-2114.409] (-2137.308) (-2250.590) (-2141.885) -- 0:06:02 673000 -- (-2207.577) (-2131.848) (-2195.560) [-2110.954] * [-2112.781] (-2140.274) (-2245.609) (-2133.056) -- 0:06:01 674000 -- (-2191.120) (-2121.236) (-2187.581) [-2128.090] * (-2112.045) (-2141.356) (-2240.686) [-2135.216] -- 0:06:00 675000 -- (-2184.954) (-2118.433) (-2191.478) [-2126.947] * [-2110.778] (-2111.666) (-2225.367) (-2132.472) -- 0:05:59 Average standard deviation of split frequencies: 0.010923 676000 -- (-2188.032) [-2111.841] (-2190.938) (-2119.478) * (-2120.647) [-2118.591] (-2218.650) (-2147.866) -- 0:05:58 677000 -- (-2190.600) [-2102.773] (-2195.260) (-2125.222) * (-2133.232) [-2111.181] (-2198.161) (-2146.601) -- 0:05:56 678000 -- (-2182.877) [-2114.355] (-2209.938) (-2116.371) * [-2112.246] (-2119.514) (-2197.179) (-2143.221) -- 0:05:56 679000 -- (-2198.612) [-2127.156] (-2196.357) (-2123.981) * [-2119.199] (-2119.968) (-2205.505) (-2134.885) -- 0:05:55 680000 -- (-2193.137) [-2120.494] (-2196.839) (-2136.824) * [-2117.073] (-2132.411) (-2203.646) (-2123.833) -- 0:05:53 Average standard deviation of split frequencies: 0.011073 681000 -- (-2205.269) [-2109.951] (-2189.671) (-2129.237) * (-2120.075) (-2137.260) (-2218.369) [-2132.701] -- 0:05:52 682000 -- (-2200.820) [-2114.567] (-2192.661) (-2124.979) * (-2122.176) (-2130.929) (-2216.050) [-2135.281] -- 0:05:51 683000 -- (-2195.253) [-2129.036] (-2189.735) (-2130.341) * (-2119.356) [-2114.161] (-2207.124) (-2133.045) -- 0:05:50 684000 -- (-2200.871) [-2121.800] (-2191.223) (-2133.221) * [-2119.312] (-2130.746) (-2198.449) (-2123.338) -- 0:05:49 685000 -- (-2185.421) [-2121.352] (-2213.246) (-2148.068) * [-2106.852] (-2119.407) (-2196.331) (-2135.692) -- 0:05:48 Average standard deviation of split frequencies: 0.011078 686000 -- (-2202.233) [-2110.769] (-2200.226) (-2131.490) * [-2118.125] (-2112.345) (-2199.900) (-2164.122) -- 0:05:47 687000 -- (-2199.817) [-2114.784] (-2209.705) (-2134.516) * (-2130.189) [-2109.591] (-2237.232) (-2160.679) -- 0:05:46 688000 -- (-2192.401) [-2102.423] (-2186.120) (-2130.685) * [-2122.351] (-2131.111) (-2232.330) (-2149.164) -- 0:05:45 689000 -- (-2198.763) (-2119.034) (-2186.425) [-2131.476] * (-2120.008) [-2123.369] (-2209.969) (-2142.763) -- 0:05:43 690000 -- (-2193.830) [-2114.969] (-2185.849) (-2130.175) * (-2123.378) [-2121.619] (-2213.341) (-2168.641) -- 0:05:42 Average standard deviation of split frequencies: 0.010823 691000 -- (-2215.747) [-2113.552] (-2186.797) (-2135.055) * [-2127.426] (-2125.364) (-2226.767) (-2137.660) -- 0:05:41 692000 -- (-2201.182) [-2111.676] (-2184.078) (-2127.063) * [-2107.587] (-2147.751) (-2219.132) (-2142.834) -- 0:05:40 693000 -- (-2190.595) [-2113.889] (-2205.940) (-2135.360) * (-2120.976) (-2147.081) (-2227.593) [-2126.261] -- 0:05:39 694000 -- (-2186.852) [-2112.670] (-2206.399) (-2127.789) * (-2130.943) (-2143.947) (-2242.827) [-2123.461] -- 0:05:38 695000 -- (-2185.351) [-2124.317] (-2206.917) (-2121.095) * (-2124.853) [-2133.067] (-2221.136) (-2138.661) -- 0:05:37 Average standard deviation of split frequencies: 0.010338 696000 -- (-2183.858) [-2109.762] (-2191.961) (-2117.672) * (-2129.360) [-2124.210] (-2207.307) (-2121.744) -- 0:05:36 697000 -- (-2193.364) (-2115.824) (-2208.811) [-2122.792] * (-2138.553) (-2114.143) (-2220.406) [-2112.629] -- 0:05:35 698000 -- (-2193.620) [-2128.147] (-2216.693) (-2140.329) * (-2122.219) (-2108.237) (-2221.604) [-2104.524] -- 0:05:34 699000 -- (-2194.447) (-2131.932) (-2196.203) [-2112.824] * [-2125.916] (-2123.959) (-2233.306) (-2137.178) -- 0:05:32 700000 -- (-2204.102) (-2128.264) (-2200.987) [-2109.926] * (-2104.498) [-2117.888] (-2247.182) (-2138.315) -- 0:05:31 Average standard deviation of split frequencies: 0.010047 701000 -- (-2201.864) (-2120.951) (-2201.529) [-2108.486] * (-2123.280) [-2118.865] (-2239.354) (-2128.821) -- 0:05:30 702000 -- (-2188.053) (-2131.954) (-2192.522) [-2114.419] * (-2125.933) [-2108.186] (-2220.436) (-2130.526) -- 0:05:29 703000 -- (-2183.562) (-2131.934) (-2200.412) [-2109.806] * (-2108.198) [-2115.012] (-2226.056) (-2121.597) -- 0:05:28 704000 -- (-2188.133) (-2159.363) (-2204.632) [-2114.923] * (-2130.629) [-2113.545] (-2225.919) (-2121.866) -- 0:05:27 705000 -- (-2188.143) (-2149.982) (-2182.552) [-2121.064] * (-2129.075) [-2108.460] (-2211.992) (-2120.214) -- 0:05:26 Average standard deviation of split frequencies: 0.010175 706000 -- (-2196.037) (-2133.113) (-2188.878) [-2112.536] * (-2137.020) (-2117.713) (-2204.688) [-2121.486] -- 0:05:25 707000 -- (-2201.230) (-2138.409) (-2194.142) [-2121.309] * (-2160.860) (-2132.382) (-2204.060) [-2112.859] -- 0:05:24 708000 -- (-2202.357) (-2117.059) (-2198.295) [-2119.341] * (-2140.147) (-2129.192) (-2198.578) [-2124.182] -- 0:05:22 709000 -- (-2198.600) (-2125.516) (-2211.644) [-2119.294] * (-2143.344) (-2136.579) (-2196.152) [-2138.483] -- 0:05:21 710000 -- (-2188.804) (-2147.729) (-2209.751) [-2108.499] * (-2160.318) [-2115.619] (-2203.894) (-2132.090) -- 0:05:20 Average standard deviation of split frequencies: 0.010183 711000 -- (-2194.141) (-2141.950) (-2209.327) [-2098.853] * (-2134.581) (-2129.133) (-2196.998) [-2136.276] -- 0:05:19 712000 -- (-2205.476) (-2130.049) (-2203.500) [-2116.036] * (-2141.057) (-2137.216) (-2207.110) [-2122.539] -- 0:05:18 713000 -- (-2205.271) (-2127.835) (-2199.957) [-2106.352] * [-2124.434] (-2116.134) (-2205.545) (-2147.965) -- 0:05:17 714000 -- (-2198.262) [-2122.602] (-2199.651) (-2109.513) * (-2141.945) [-2119.904] (-2218.154) (-2138.566) -- 0:05:16 715000 -- (-2204.632) (-2123.073) (-2199.057) [-2114.500] * (-2115.357) [-2110.076] (-2201.929) (-2145.384) -- 0:05:15 Average standard deviation of split frequencies: 0.010234 716000 -- (-2201.223) [-2122.642] (-2180.988) (-2123.818) * (-2120.581) [-2110.611] (-2200.289) (-2136.950) -- 0:05:14 717000 -- (-2209.242) [-2115.397] (-2198.622) (-2129.771) * (-2131.682) [-2109.935] (-2204.955) (-2131.199) -- 0:05:12 718000 -- (-2200.848) (-2132.241) (-2200.294) [-2116.398] * (-2155.304) [-2112.523] (-2218.704) (-2118.027) -- 0:05:11 719000 -- (-2207.273) [-2124.439] (-2195.979) (-2119.036) * (-2136.460) (-2154.693) (-2217.466) [-2127.088] -- 0:05:10 720000 -- (-2192.116) (-2131.760) (-2195.014) [-2114.766] * [-2120.768] (-2124.650) (-2222.480) (-2132.708) -- 0:05:09 Average standard deviation of split frequencies: 0.010277 721000 -- (-2204.988) (-2136.701) (-2180.621) [-2106.358] * [-2116.482] (-2131.915) (-2219.366) (-2115.231) -- 0:05:08 722000 -- (-2209.852) [-2143.233] (-2196.663) (-2118.115) * (-2133.392) (-2132.252) (-2203.540) [-2109.222] -- 0:05:07 723000 -- (-2225.558) (-2129.458) (-2207.895) [-2114.438] * (-2146.240) (-2139.906) (-2215.559) [-2118.620] -- 0:05:06 724000 -- (-2205.625) [-2115.939] (-2207.464) (-2126.741) * (-2143.599) (-2129.706) (-2212.723) [-2114.470] -- 0:05:05 725000 -- (-2205.990) [-2124.657] (-2198.721) (-2135.982) * (-2162.602) (-2140.126) (-2210.406) [-2116.532] -- 0:05:04 Average standard deviation of split frequencies: 0.009861 726000 -- (-2193.005) [-2119.350] (-2192.077) (-2127.003) * (-2146.550) (-2136.553) (-2224.347) [-2113.471] -- 0:05:03 727000 -- (-2189.724) [-2117.606] (-2194.028) (-2140.839) * (-2141.571) [-2114.003] (-2229.974) (-2121.322) -- 0:05:01 728000 -- (-2195.255) [-2121.627] (-2194.544) (-2125.752) * (-2146.243) [-2117.937] (-2222.959) (-2121.700) -- 0:05:00 729000 -- (-2187.677) [-2104.888] (-2195.371) (-2122.701) * (-2133.418) [-2124.752] (-2226.516) (-2120.097) -- 0:04:59 730000 -- (-2191.246) [-2099.091] (-2196.153) (-2116.972) * (-2151.513) [-2133.109] (-2217.754) (-2129.968) -- 0:04:58 Average standard deviation of split frequencies: 0.009620 731000 -- (-2202.844) [-2101.364] (-2193.353) (-2112.117) * (-2142.193) (-2130.590) (-2221.777) [-2114.543] -- 0:04:57 732000 -- (-2200.873) (-2127.064) (-2197.222) [-2109.319] * (-2139.252) (-2137.090) (-2212.728) [-2111.513] -- 0:04:56 733000 -- (-2185.090) (-2126.432) (-2194.159) [-2109.091] * [-2118.726] (-2123.353) (-2231.378) (-2136.313) -- 0:04:55 734000 -- (-2192.299) (-2121.437) (-2198.057) [-2119.796] * [-2109.183] (-2128.204) (-2222.457) (-2122.345) -- 0:04:54 735000 -- (-2209.926) (-2151.754) (-2176.003) [-2116.850] * [-2095.998] (-2138.113) (-2216.305) (-2137.335) -- 0:04:53 Average standard deviation of split frequencies: 0.009778 736000 -- (-2190.498) [-2131.995] (-2179.694) (-2123.116) * [-2098.104] (-2136.529) (-2222.847) (-2133.725) -- 0:04:51 737000 -- (-2201.386) [-2130.428] (-2189.949) (-2119.537) * [-2108.004] (-2168.358) (-2207.109) (-2119.315) -- 0:04:50 738000 -- (-2189.641) (-2117.631) (-2199.746) [-2117.877] * [-2105.744] (-2155.999) (-2199.615) (-2124.871) -- 0:04:49 739000 -- (-2191.020) [-2114.106] (-2201.492) (-2127.297) * [-2113.033] (-2132.562) (-2227.217) (-2149.538) -- 0:04:48 740000 -- (-2177.560) [-2116.164] (-2180.888) (-2111.555) * (-2120.722) (-2166.925) (-2224.200) [-2133.657] -- 0:04:47 Average standard deviation of split frequencies: 0.009582 741000 -- (-2204.301) (-2117.327) (-2191.330) [-2107.143] * (-2125.770) [-2138.256] (-2225.624) (-2127.883) -- 0:04:46 742000 -- (-2214.597) (-2119.855) (-2201.558) [-2109.382] * [-2117.914] (-2136.255) (-2238.211) (-2150.824) -- 0:04:45 743000 -- (-2202.197) (-2123.387) (-2190.734) [-2115.192] * (-2116.335) [-2138.683] (-2230.264) (-2135.217) -- 0:04:44 744000 -- (-2204.053) (-2131.227) (-2200.023) [-2109.264] * [-2105.198] (-2124.851) (-2205.459) (-2138.173) -- 0:04:43 745000 -- (-2195.547) (-2117.055) (-2199.947) [-2107.614] * [-2111.401] (-2130.991) (-2215.949) (-2140.628) -- 0:04:42 Average standard deviation of split frequencies: 0.009542 746000 -- (-2192.463) (-2119.242) (-2186.141) [-2100.189] * [-2110.783] (-2122.149) (-2214.008) (-2149.499) -- 0:04:40 747000 -- (-2198.798) (-2122.439) (-2193.446) [-2092.727] * [-2129.842] (-2120.164) (-2209.370) (-2144.808) -- 0:04:39 748000 -- (-2183.158) (-2135.796) (-2206.881) [-2103.516] * (-2144.224) [-2126.875] (-2205.659) (-2135.699) -- 0:04:38 749000 -- (-2199.757) (-2116.509) (-2214.652) [-2119.618] * (-2117.778) [-2115.476] (-2220.122) (-2143.488) -- 0:04:37 750000 -- (-2200.857) [-2118.011] (-2199.442) (-2115.777) * [-2120.684] (-2102.604) (-2230.778) (-2147.327) -- 0:04:36 Average standard deviation of split frequencies: 0.009580 751000 -- (-2195.270) (-2142.577) (-2193.791) [-2114.012] * (-2123.692) [-2096.254] (-2236.525) (-2166.238) -- 0:04:35 752000 -- (-2181.750) (-2130.704) (-2204.641) [-2108.434] * (-2124.640) [-2104.632] (-2216.915) (-2147.482) -- 0:04:34 753000 -- (-2206.261) (-2133.465) (-2192.180) [-2104.576] * (-2127.147) [-2117.702] (-2237.681) (-2130.281) -- 0:04:33 754000 -- (-2196.050) (-2140.436) (-2198.786) [-2116.194] * [-2103.590] (-2125.499) (-2212.324) (-2147.923) -- 0:04:32 755000 -- (-2203.490) (-2152.031) (-2222.978) [-2110.518] * [-2093.991] (-2108.280) (-2211.003) (-2144.371) -- 0:04:30 Average standard deviation of split frequencies: 0.009450 756000 -- (-2199.606) (-2134.121) (-2216.460) [-2129.923] * [-2106.379] (-2119.590) (-2217.321) (-2134.384) -- 0:04:29 757000 -- (-2191.632) (-2132.837) (-2212.180) [-2115.882] * (-2117.833) [-2118.547] (-2211.176) (-2134.709) -- 0:04:29 758000 -- (-2206.554) [-2122.944] (-2201.306) (-2114.009) * [-2116.181] (-2118.686) (-2230.677) (-2134.490) -- 0:04:27 759000 -- (-2208.222) [-2121.685] (-2196.112) (-2126.870) * (-2128.904) [-2108.150] (-2228.085) (-2150.749) -- 0:04:26 760000 -- (-2221.461) [-2127.557] (-2182.653) (-2130.272) * (-2124.339) [-2127.378] (-2218.324) (-2134.575) -- 0:04:25 Average standard deviation of split frequencies: 0.009289 761000 -- (-2219.405) [-2127.419] (-2184.427) (-2133.075) * (-2125.521) [-2112.367] (-2222.831) (-2144.388) -- 0:04:24 762000 -- (-2200.294) [-2109.575] (-2193.366) (-2145.404) * (-2127.201) [-2122.797] (-2207.971) (-2148.349) -- 0:04:23 763000 -- (-2193.675) [-2112.447] (-2182.340) (-2117.976) * [-2132.423] (-2127.278) (-2208.176) (-2151.875) -- 0:04:22 764000 -- (-2183.377) [-2111.062] (-2185.193) (-2124.812) * (-2138.042) [-2114.777] (-2223.299) (-2154.441) -- 0:04:21 765000 -- (-2187.537) [-2108.473] (-2184.110) (-2131.431) * (-2121.220) [-2112.499] (-2220.334) (-2157.613) -- 0:04:20 Average standard deviation of split frequencies: 0.009341 766000 -- (-2189.515) [-2101.769] (-2184.273) (-2130.759) * (-2132.740) [-2111.293] (-2218.533) (-2147.041) -- 0:04:19 767000 -- (-2193.962) [-2108.541] (-2188.794) (-2120.781) * (-2159.447) [-2109.038] (-2206.047) (-2145.410) -- 0:04:17 768000 -- (-2199.291) [-2121.582] (-2194.798) (-2135.262) * (-2135.448) [-2118.199] (-2207.414) (-2159.513) -- 0:04:16 769000 -- (-2200.788) [-2110.008] (-2179.764) (-2134.729) * (-2122.560) [-2114.251] (-2203.829) (-2143.230) -- 0:04:15 770000 -- (-2210.093) (-2118.545) (-2180.708) [-2130.073] * (-2149.951) [-2125.810] (-2214.955) (-2128.471) -- 0:04:14 Average standard deviation of split frequencies: 0.009168 771000 -- (-2199.989) [-2106.109] (-2188.958) (-2126.524) * (-2129.240) (-2126.530) (-2206.479) [-2123.449] -- 0:04:13 772000 -- (-2217.848) (-2123.731) (-2187.606) [-2129.489] * (-2143.388) [-2123.923] (-2211.100) (-2141.044) -- 0:04:12 773000 -- (-2199.352) (-2128.259) (-2180.161) [-2130.223] * (-2143.113) [-2122.635] (-2212.142) (-2128.738) -- 0:04:11 774000 -- (-2207.626) [-2129.432] (-2185.062) (-2132.037) * (-2142.649) [-2133.381] (-2218.555) (-2116.121) -- 0:04:10 775000 -- (-2199.489) [-2130.194] (-2178.636) (-2124.385) * (-2147.683) [-2116.656] (-2205.993) (-2121.076) -- 0:04:09 Average standard deviation of split frequencies: 0.009126 776000 -- (-2209.848) (-2129.113) (-2194.211) [-2122.555] * (-2160.863) (-2121.744) (-2205.744) [-2116.003] -- 0:04:07 777000 -- (-2199.182) [-2114.680] (-2198.455) (-2121.867) * (-2160.297) [-2116.686] (-2219.152) (-2128.806) -- 0:04:06 778000 -- (-2199.200) [-2122.462] (-2188.342) (-2119.919) * (-2146.063) [-2122.816] (-2214.420) (-2131.725) -- 0:04:05 779000 -- (-2199.445) (-2114.796) (-2204.619) [-2130.975] * (-2152.252) (-2120.970) (-2200.450) [-2119.958] -- 0:04:04 780000 -- (-2186.715) [-2102.701] (-2193.109) (-2142.590) * (-2136.360) (-2133.323) (-2221.405) [-2125.192] -- 0:04:03 Average standard deviation of split frequencies: 0.008870 781000 -- (-2199.434) (-2121.626) (-2213.314) [-2130.117] * (-2121.689) (-2138.879) (-2222.037) [-2121.468] -- 0:04:02 782000 -- (-2186.221) [-2106.566] (-2202.022) (-2131.790) * (-2137.969) (-2138.738) (-2202.055) [-2104.837] -- 0:04:01 783000 -- (-2175.107) [-2103.126] (-2194.160) (-2128.106) * (-2105.071) [-2117.479] (-2199.776) (-2135.109) -- 0:04:00 784000 -- (-2179.447) [-2117.395] (-2178.291) (-2131.089) * (-2122.061) (-2135.051) (-2209.918) [-2106.816] -- 0:03:59 785000 -- (-2185.862) [-2115.675] (-2169.970) (-2132.052) * (-2139.849) [-2108.051] (-2204.566) (-2112.434) -- 0:03:58 Average standard deviation of split frequencies: 0.008863 786000 -- (-2205.826) [-2109.251] (-2194.307) (-2127.143) * (-2130.505) [-2117.565] (-2203.586) (-2126.952) -- 0:03:56 787000 -- (-2229.724) (-2119.567) (-2205.667) [-2110.344] * (-2141.447) (-2114.854) (-2209.917) [-2112.371] -- 0:03:55 788000 -- (-2218.583) (-2135.343) (-2205.853) [-2115.751] * (-2152.090) (-2112.160) (-2213.847) [-2111.239] -- 0:03:54 789000 -- (-2219.610) [-2126.996] (-2214.899) (-2110.263) * (-2153.820) (-2116.106) (-2215.236) [-2120.830] -- 0:03:53 790000 -- (-2212.476) (-2110.630) (-2215.721) [-2119.006] * (-2149.115) [-2109.113] (-2229.092) (-2115.013) -- 0:03:52 Average standard deviation of split frequencies: 0.008592 791000 -- (-2211.727) [-2117.199] (-2220.338) (-2130.515) * (-2133.750) [-2104.234] (-2242.153) (-2131.182) -- 0:03:51 792000 -- (-2234.783) (-2130.698) (-2193.828) [-2115.982] * (-2143.441) [-2103.568] (-2227.464) (-2140.949) -- 0:03:50 793000 -- (-2236.685) (-2129.660) (-2191.590) [-2117.966] * (-2157.872) [-2109.180] (-2243.012) (-2122.383) -- 0:03:49 794000 -- (-2223.595) (-2144.632) (-2189.935) [-2118.727] * (-2156.618) [-2116.993] (-2225.085) (-2129.304) -- 0:03:48 795000 -- (-2225.359) [-2118.495] (-2198.923) (-2128.114) * (-2163.138) (-2120.629) (-2221.476) [-2127.657] -- 0:03:46 Average standard deviation of split frequencies: 0.008462 796000 -- (-2194.661) (-2129.176) (-2196.006) [-2119.703] * (-2158.780) (-2116.444) (-2206.841) [-2132.466] -- 0:03:45 797000 -- (-2204.585) [-2120.940] (-2209.945) (-2127.945) * (-2144.564) [-2133.410] (-2231.703) (-2148.853) -- 0:03:44 798000 -- (-2196.815) (-2129.543) (-2190.193) [-2115.633] * [-2123.785] (-2128.490) (-2209.124) (-2159.916) -- 0:03:43 799000 -- (-2214.995) (-2134.404) (-2205.972) [-2114.804] * (-2134.975) [-2125.484] (-2215.791) (-2151.344) -- 0:03:42 800000 -- (-2213.723) (-2124.148) (-2188.597) [-2126.072] * (-2130.028) [-2111.460] (-2212.605) (-2126.176) -- 0:03:41 Average standard deviation of split frequencies: 0.008563 801000 -- (-2220.373) (-2137.435) (-2191.629) [-2126.267] * (-2115.501) [-2114.262] (-2216.802) (-2136.319) -- 0:03:40 802000 -- (-2216.734) (-2125.528) (-2192.304) [-2123.745] * (-2131.844) [-2124.848] (-2238.153) (-2140.003) -- 0:03:38 803000 -- (-2211.381) (-2131.220) (-2188.141) [-2118.389] * (-2129.039) [-2118.899] (-2219.426) (-2123.006) -- 0:03:38 804000 -- (-2220.748) (-2121.288) (-2204.400) [-2118.484] * (-2127.343) [-2116.352] (-2231.220) (-2128.977) -- 0:03:36 805000 -- (-2192.864) (-2130.501) (-2209.073) [-2110.509] * (-2141.676) (-2116.591) (-2245.728) [-2124.676] -- 0:03:35 Average standard deviation of split frequencies: 0.008669 806000 -- (-2193.820) (-2130.889) (-2181.966) [-2117.208] * (-2136.343) [-2101.742] (-2239.997) (-2128.578) -- 0:03:34 807000 -- (-2183.516) (-2134.911) (-2211.085) [-2117.955] * (-2147.503) (-2119.344) (-2238.240) [-2106.556] -- 0:03:33 808000 -- (-2171.441) (-2129.719) (-2190.745) [-2114.998] * (-2123.982) (-2130.314) (-2233.125) [-2109.093] -- 0:03:32 809000 -- (-2185.959) (-2138.158) (-2191.741) [-2112.876] * (-2118.005) (-2135.989) (-2225.662) [-2112.519] -- 0:03:31 810000 -- (-2202.858) [-2122.371] (-2179.696) (-2119.932) * [-2131.856] (-2140.724) (-2221.276) (-2117.585) -- 0:03:30 Average standard deviation of split frequencies: 0.008812 811000 -- (-2194.355) [-2120.988] (-2197.737) (-2132.506) * (-2120.523) (-2151.616) (-2213.189) [-2122.768] -- 0:03:29 812000 -- (-2191.629) [-2118.203] (-2205.909) (-2143.277) * [-2121.885] (-2135.510) (-2221.916) (-2126.405) -- 0:03:28 813000 -- (-2191.108) [-2123.228] (-2192.207) (-2134.597) * (-2138.614) (-2131.107) (-2199.432) [-2116.445] -- 0:03:27 814000 -- (-2198.665) (-2122.924) (-2199.543) [-2104.104] * (-2152.979) (-2133.544) (-2211.026) [-2108.174] -- 0:03:25 815000 -- (-2203.613) (-2108.293) (-2204.062) [-2104.642] * (-2125.241) (-2140.524) (-2212.293) [-2105.777] -- 0:03:24 Average standard deviation of split frequencies: 0.008824 816000 -- (-2179.648) (-2121.316) (-2202.068) [-2111.180] * (-2116.130) (-2135.218) (-2211.406) [-2104.239] -- 0:03:23 817000 -- (-2201.735) (-2122.047) (-2189.287) [-2114.640] * (-2126.090) (-2142.004) (-2219.016) [-2111.939] -- 0:03:22 818000 -- (-2200.515) [-2115.931] (-2187.253) (-2116.480) * [-2121.995] (-2142.276) (-2207.156) (-2123.358) -- 0:03:21 819000 -- (-2200.986) (-2129.141) (-2192.367) [-2096.635] * [-2122.992] (-2140.151) (-2216.279) (-2128.583) -- 0:03:20 820000 -- (-2195.604) [-2116.656] (-2195.074) (-2107.682) * (-2128.516) (-2122.421) (-2216.690) [-2124.816] -- 0:03:19 Average standard deviation of split frequencies: 0.008932 821000 -- (-2198.450) (-2118.129) (-2200.753) [-2112.563] * (-2129.316) (-2127.456) (-2200.021) [-2121.129] -- 0:03:18 822000 -- (-2188.293) (-2134.281) (-2208.304) [-2122.997] * [-2121.481] (-2136.392) (-2209.735) (-2132.108) -- 0:03:17 823000 -- (-2206.666) (-2145.272) (-2190.339) [-2112.103] * [-2114.933] (-2125.799) (-2207.936) (-2142.487) -- 0:03:15 824000 -- (-2200.796) (-2150.749) (-2191.038) [-2116.187] * (-2113.514) [-2125.081] (-2206.078) (-2161.276) -- 0:03:14 825000 -- (-2206.212) (-2137.414) (-2193.102) [-2123.739] * [-2132.435] (-2128.089) (-2214.222) (-2153.453) -- 0:03:13 Average standard deviation of split frequencies: 0.009081 826000 -- (-2203.844) (-2143.651) (-2195.211) [-2114.719] * [-2134.474] (-2149.551) (-2214.260) (-2140.427) -- 0:03:12 827000 -- (-2216.827) (-2126.609) (-2196.881) [-2112.164] * [-2119.233] (-2158.469) (-2219.221) (-2128.402) -- 0:03:11 828000 -- (-2201.325) (-2134.113) (-2207.435) [-2102.823] * (-2127.325) (-2156.910) (-2205.558) [-2134.474] -- 0:03:10 829000 -- (-2190.569) (-2135.286) (-2196.168) [-2108.002] * (-2111.102) (-2142.572) (-2218.472) [-2133.337] -- 0:03:09 830000 -- (-2197.158) (-2145.756) (-2199.136) [-2111.077] * [-2114.588] (-2131.601) (-2206.955) (-2133.389) -- 0:03:08 Average standard deviation of split frequencies: 0.009043 831000 -- (-2207.048) (-2121.046) (-2200.557) [-2106.782] * [-2116.266] (-2133.793) (-2196.348) (-2150.811) -- 0:03:07 832000 -- (-2205.667) (-2111.475) (-2191.847) [-2109.989] * [-2106.712] (-2134.319) (-2202.264) (-2167.977) -- 0:03:06 833000 -- (-2205.750) [-2115.517] (-2200.296) (-2110.034) * (-2124.319) [-2119.718] (-2211.951) (-2181.582) -- 0:03:05 834000 -- (-2206.432) (-2128.667) (-2181.697) [-2113.890] * [-2107.722] (-2131.905) (-2213.214) (-2165.199) -- 0:03:03 835000 -- (-2202.387) (-2120.078) (-2182.462) [-2126.965] * [-2108.333] (-2117.830) (-2196.306) (-2153.653) -- 0:03:02 Average standard deviation of split frequencies: 0.009090 836000 -- (-2198.727) (-2123.125) (-2189.927) [-2112.685] * [-2118.638] (-2148.545) (-2224.446) (-2165.095) -- 0:03:01 837000 -- (-2212.888) (-2110.232) (-2200.253) [-2117.963] * [-2114.205] (-2124.208) (-2235.207) (-2152.908) -- 0:03:00 838000 -- (-2190.603) [-2112.291] (-2218.181) (-2124.473) * [-2106.539] (-2111.456) (-2224.481) (-2141.676) -- 0:02:59 839000 -- (-2177.589) [-2112.237] (-2208.953) (-2110.000) * (-2109.004) [-2112.469] (-2214.499) (-2157.568) -- 0:02:58 840000 -- (-2178.558) (-2114.166) (-2209.138) [-2109.795] * (-2116.861) [-2116.688] (-2217.011) (-2137.230) -- 0:02:57 Average standard deviation of split frequencies: 0.009268 841000 -- (-2173.714) (-2127.636) (-2198.867) [-2107.231] * (-2132.933) [-2112.296] (-2220.724) (-2143.458) -- 0:02:56 842000 -- (-2195.040) (-2108.000) (-2196.194) [-2100.527] * [-2115.519] (-2129.415) (-2217.628) (-2150.085) -- 0:02:55 843000 -- (-2195.976) [-2120.473] (-2198.972) (-2119.570) * [-2102.744] (-2123.448) (-2214.669) (-2144.534) -- 0:02:53 844000 -- (-2194.618) [-2116.075] (-2200.035) (-2124.401) * [-2106.479] (-2115.697) (-2208.220) (-2138.666) -- 0:02:52 845000 -- (-2206.348) (-2125.313) (-2208.146) [-2123.393] * (-2115.318) [-2121.950] (-2234.053) (-2128.714) -- 0:02:51 Average standard deviation of split frequencies: 0.009026 846000 -- (-2213.632) [-2120.925] (-2189.500) (-2109.796) * [-2124.469] (-2124.165) (-2226.197) (-2130.086) -- 0:02:50 847000 -- (-2206.172) (-2122.898) (-2171.934) [-2113.534] * (-2124.576) [-2118.295] (-2224.615) (-2130.683) -- 0:02:49 848000 -- (-2214.294) [-2116.095] (-2184.662) (-2121.829) * [-2120.143] (-2126.904) (-2242.193) (-2138.863) -- 0:02:48 849000 -- (-2202.021) [-2124.341] (-2181.401) (-2118.211) * [-2129.066] (-2116.292) (-2253.948) (-2148.123) -- 0:02:47 850000 -- (-2193.492) (-2140.864) (-2186.515) [-2116.983] * (-2145.264) [-2109.103] (-2235.826) (-2126.594) -- 0:02:46 Average standard deviation of split frequencies: 0.008854 851000 -- (-2190.223) [-2114.259] (-2188.321) (-2130.689) * (-2122.397) [-2110.851] (-2207.858) (-2139.683) -- 0:02:45 852000 -- (-2197.188) [-2110.196] (-2205.237) (-2119.527) * [-2128.019] (-2118.164) (-2201.609) (-2154.629) -- 0:02:43 853000 -- (-2191.926) [-2128.003] (-2208.110) (-2134.598) * (-2159.008) [-2130.145] (-2211.081) (-2117.566) -- 0:02:42 854000 -- (-2183.736) [-2119.759] (-2199.161) (-2136.527) * (-2158.831) [-2122.207] (-2200.712) (-2126.943) -- 0:02:41 855000 -- (-2185.950) (-2130.562) (-2193.986) [-2121.936] * (-2139.432) (-2129.902) (-2195.074) [-2122.521] -- 0:02:40 Average standard deviation of split frequencies: 0.008830 856000 -- (-2192.082) (-2128.287) (-2214.576) [-2120.945] * (-2140.861) (-2115.767) (-2207.711) [-2112.109] -- 0:02:39 857000 -- (-2209.952) (-2122.808) (-2203.089) [-2105.261] * (-2143.921) (-2119.154) (-2192.839) [-2105.467] -- 0:02:38 858000 -- (-2201.594) (-2126.527) (-2195.542) [-2098.044] * (-2154.195) (-2123.944) (-2200.946) [-2111.588] -- 0:02:37 859000 -- (-2190.481) [-2126.388] (-2201.419) (-2098.621) * (-2136.145) (-2117.807) (-2219.903) [-2115.936] -- 0:02:36 860000 -- (-2188.466) (-2126.142) (-2201.886) [-2106.884] * (-2133.876) (-2140.123) (-2203.591) [-2125.286] -- 0:02:35 Average standard deviation of split frequencies: 0.008709 861000 -- (-2194.816) [-2134.359] (-2200.770) (-2110.891) * (-2131.200) (-2137.582) (-2206.845) [-2114.263] -- 0:02:34 862000 -- (-2206.518) (-2150.196) (-2203.071) [-2111.545] * (-2141.250) (-2125.657) (-2214.423) [-2107.347] -- 0:02:32 863000 -- (-2192.315) [-2122.592] (-2207.296) (-2113.406) * (-2130.924) (-2151.035) (-2210.392) [-2110.610] -- 0:02:31 864000 -- (-2208.977) (-2132.945) (-2219.967) [-2118.714] * (-2128.664) (-2157.117) (-2222.250) [-2110.586] -- 0:02:30 865000 -- (-2174.044) [-2112.442] (-2201.530) (-2117.688) * (-2118.358) (-2143.177) (-2214.939) [-2110.735] -- 0:02:29 Average standard deviation of split frequencies: 0.008722 866000 -- (-2195.869) (-2121.850) (-2203.603) [-2115.659] * [-2104.963] (-2142.042) (-2224.735) (-2117.928) -- 0:02:28 867000 -- (-2173.694) (-2122.162) (-2191.949) [-2108.455] * (-2108.053) (-2146.701) (-2232.881) [-2110.504] -- 0:02:27 868000 -- (-2197.513) (-2108.837) (-2196.161) [-2112.586] * [-2105.815] (-2130.527) (-2238.162) (-2129.340) -- 0:02:26 869000 -- (-2201.363) [-2111.606] (-2211.990) (-2130.641) * (-2121.476) (-2143.396) (-2228.611) [-2132.963] -- 0:02:25 870000 -- (-2210.088) [-2111.134] (-2195.673) (-2118.296) * (-2128.640) [-2131.582] (-2213.403) (-2126.768) -- 0:02:24 Average standard deviation of split frequencies: 0.008741 871000 -- (-2193.787) [-2116.070] (-2204.850) (-2123.651) * (-2114.839) [-2112.527] (-2224.194) (-2138.370) -- 0:02:22 872000 -- (-2182.872) [-2118.785] (-2207.465) (-2127.114) * [-2107.328] (-2124.175) (-2221.607) (-2144.874) -- 0:02:21 873000 -- (-2208.823) [-2119.944] (-2205.990) (-2137.307) * [-2114.626] (-2122.711) (-2221.021) (-2148.486) -- 0:02:20 874000 -- (-2202.817) [-2103.954] (-2214.919) (-2142.008) * (-2117.697) [-2133.334] (-2212.504) (-2159.338) -- 0:02:19 875000 -- (-2183.412) [-2107.964] (-2216.617) (-2137.871) * (-2124.545) [-2130.967] (-2238.107) (-2147.618) -- 0:02:18 Average standard deviation of split frequencies: 0.008909 876000 -- (-2181.287) [-2118.212] (-2196.505) (-2148.151) * [-2126.353] (-2125.743) (-2233.267) (-2133.571) -- 0:02:17 877000 -- (-2196.720) [-2110.823] (-2186.106) (-2139.787) * (-2127.904) [-2125.471] (-2229.222) (-2143.251) -- 0:02:16 878000 -- (-2206.175) (-2126.126) (-2188.723) [-2118.767] * (-2127.374) [-2130.001] (-2210.537) (-2143.635) -- 0:02:15 879000 -- (-2188.011) (-2119.538) (-2187.878) [-2115.954] * (-2140.208) (-2125.515) (-2225.538) [-2117.088] -- 0:02:14 880000 -- (-2199.223) [-2096.578] (-2188.490) (-2133.164) * (-2119.335) (-2141.468) (-2215.948) [-2109.078] -- 0:02:13 Average standard deviation of split frequencies: 0.008945 881000 -- (-2201.127) [-2108.999] (-2205.842) (-2131.699) * (-2122.466) (-2137.712) (-2223.522) [-2105.447] -- 0:02:11 882000 -- (-2181.972) [-2108.237] (-2207.390) (-2139.652) * (-2129.937) (-2129.200) (-2219.339) [-2104.859] -- 0:02:10 883000 -- (-2180.452) [-2103.638] (-2198.750) (-2125.159) * (-2128.202) (-2117.603) (-2247.840) [-2114.627] -- 0:02:09 884000 -- (-2185.911) [-2100.906] (-2201.616) (-2133.958) * (-2137.396) [-2129.727] (-2232.700) (-2127.697) -- 0:02:08 885000 -- (-2192.104) [-2103.701] (-2202.238) (-2120.889) * (-2135.569) (-2154.689) (-2230.534) [-2110.651] -- 0:02:07 Average standard deviation of split frequencies: 0.008744 886000 -- (-2195.453) [-2114.484] (-2220.462) (-2136.894) * (-2149.212) (-2139.018) (-2245.176) [-2115.689] -- 0:02:06 887000 -- (-2183.882) (-2125.608) (-2213.699) [-2113.221] * (-2148.182) [-2139.187] (-2234.841) (-2110.706) -- 0:02:05 888000 -- (-2185.679) [-2113.899] (-2199.478) (-2125.299) * (-2152.984) (-2129.442) (-2212.000) [-2111.689] -- 0:02:04 889000 -- (-2182.979) (-2107.574) (-2209.527) [-2121.720] * (-2137.620) (-2135.198) (-2225.545) [-2116.375] -- 0:02:03 890000 -- (-2188.610) [-2114.837] (-2201.316) (-2121.377) * (-2145.442) (-2125.405) (-2207.341) [-2127.682] -- 0:02:01 Average standard deviation of split frequencies: 0.008704 891000 -- (-2180.158) [-2114.452] (-2189.012) (-2124.891) * (-2150.579) (-2141.002) (-2210.884) [-2140.922] -- 0:02:00 892000 -- (-2192.126) (-2134.316) (-2194.789) [-2119.316] * [-2130.017] (-2139.570) (-2208.000) (-2124.800) -- 0:01:59 893000 -- (-2196.780) [-2115.340] (-2170.003) (-2137.187) * [-2115.676] (-2132.274) (-2208.035) (-2136.544) -- 0:01:58 894000 -- (-2201.867) (-2122.660) (-2183.874) [-2141.947] * (-2118.240) [-2113.802] (-2201.021) (-2122.278) -- 0:01:57 895000 -- (-2190.264) [-2115.246] (-2193.252) (-2151.211) * (-2127.462) [-2129.154] (-2215.377) (-2134.812) -- 0:01:56 Average standard deviation of split frequencies: 0.008382 896000 -- (-2177.024) [-2118.524] (-2186.650) (-2134.797) * [-2120.931] (-2142.046) (-2205.596) (-2126.102) -- 0:01:55 897000 -- (-2201.098) [-2120.977] (-2182.296) (-2119.014) * [-2117.729] (-2128.857) (-2207.628) (-2152.574) -- 0:01:54 898000 -- (-2186.389) (-2124.770) (-2195.317) [-2137.340] * (-2132.385) [-2119.372] (-2208.259) (-2135.443) -- 0:01:53 899000 -- (-2193.206) [-2117.548] (-2208.259) (-2139.210) * (-2128.059) [-2103.648] (-2228.071) (-2134.268) -- 0:01:52 900000 -- (-2193.291) [-2116.606] (-2182.471) (-2137.899) * (-2110.589) [-2117.664] (-2218.803) (-2128.350) -- 0:01:50 Average standard deviation of split frequencies: 0.008328 901000 -- (-2181.634) [-2106.994] (-2178.532) (-2137.850) * (-2128.622) (-2131.902) (-2213.689) [-2118.615] -- 0:01:49 902000 -- (-2184.407) [-2110.120] (-2194.721) (-2131.873) * (-2139.883) (-2123.469) (-2210.535) [-2113.940] -- 0:01:48 903000 -- (-2192.571) (-2108.256) (-2193.215) [-2131.921] * (-2162.711) (-2112.714) (-2205.226) [-2121.632] -- 0:01:47 904000 -- (-2188.370) [-2113.557] (-2207.642) (-2128.136) * (-2142.726) (-2107.138) (-2215.406) [-2109.514] -- 0:01:46 905000 -- (-2202.308) (-2116.439) (-2199.380) [-2121.730] * (-2143.610) (-2127.525) (-2234.362) [-2112.888] -- 0:01:45 Average standard deviation of split frequencies: 0.008296 906000 -- (-2228.162) (-2143.096) (-2182.923) [-2115.468] * (-2149.430) (-2140.881) (-2223.106) [-2106.371] -- 0:01:44 907000 -- (-2212.086) [-2117.505] (-2195.390) (-2125.933) * (-2130.158) (-2141.018) (-2213.759) [-2112.555] -- 0:01:43 908000 -- (-2196.768) [-2116.744] (-2200.649) (-2126.933) * [-2130.083] (-2144.630) (-2214.203) (-2126.973) -- 0:01:42 909000 -- (-2221.916) [-2122.137] (-2190.372) (-2144.547) * (-2119.265) (-2148.827) (-2202.556) [-2119.887] -- 0:01:40 910000 -- (-2207.362) [-2107.872] (-2191.514) (-2146.581) * [-2137.644] (-2116.019) (-2213.480) (-2122.990) -- 0:01:39 Average standard deviation of split frequencies: 0.008340 911000 -- (-2202.297) [-2117.159] (-2192.930) (-2155.597) * (-2144.088) (-2134.322) (-2224.892) [-2107.158] -- 0:01:38 912000 -- (-2224.001) [-2127.331] (-2186.587) (-2158.755) * (-2115.801) [-2125.645] (-2223.554) (-2128.708) -- 0:01:37 913000 -- (-2199.624) (-2127.864) (-2203.112) [-2141.652] * [-2103.929] (-2131.903) (-2220.583) (-2124.168) -- 0:01:36 914000 -- (-2202.121) [-2118.323] (-2195.591) (-2144.400) * [-2118.990] (-2138.379) (-2227.054) (-2125.747) -- 0:01:35 915000 -- (-2219.267) [-2115.380] (-2197.324) (-2143.257) * (-2126.874) (-2148.919) (-2219.348) [-2116.946] -- 0:01:34 Average standard deviation of split frequencies: 0.008486 916000 -- (-2197.338) [-2126.732] (-2185.795) (-2136.742) * [-2132.372] (-2159.227) (-2204.768) (-2122.540) -- 0:01:33 917000 -- (-2195.904) [-2137.287] (-2180.857) (-2149.407) * (-2122.196) (-2166.565) (-2234.754) [-2117.539] -- 0:01:32 918000 -- (-2196.601) [-2138.526] (-2188.549) (-2138.442) * (-2114.308) (-2148.824) (-2228.180) [-2105.686] -- 0:01:30 919000 -- (-2185.820) (-2138.602) (-2185.474) [-2129.175] * (-2122.831) (-2141.728) (-2216.256) [-2106.023] -- 0:01:29 920000 -- (-2206.133) (-2114.840) (-2203.640) [-2130.533] * [-2118.522] (-2140.669) (-2198.903) (-2124.288) -- 0:01:28 Average standard deviation of split frequencies: 0.008164 921000 -- (-2219.195) [-2110.386] (-2200.868) (-2136.417) * (-2140.039) (-2143.161) (-2210.387) [-2109.821] -- 0:01:27 922000 -- (-2208.885) [-2120.550] (-2221.241) (-2112.587) * (-2130.515) (-2139.170) (-2216.544) [-2106.354] -- 0:01:26 923000 -- (-2188.345) [-2115.019] (-2215.972) (-2130.500) * (-2119.666) (-2150.206) (-2198.165) [-2115.315] -- 0:01:25 924000 -- (-2183.083) [-2117.067] (-2217.844) (-2133.119) * (-2114.375) (-2164.445) (-2197.740) [-2119.646] -- 0:01:24 925000 -- (-2176.130) [-2115.055] (-2208.870) (-2128.363) * [-2105.188] (-2166.291) (-2217.438) (-2123.400) -- 0:01:23 Average standard deviation of split frequencies: 0.008059 926000 -- (-2181.818) [-2124.785] (-2197.574) (-2127.220) * (-2115.406) (-2148.835) (-2212.928) [-2122.250] -- 0:01:22 927000 -- (-2173.614) [-2108.365] (-2199.320) (-2116.237) * (-2117.485) (-2123.442) (-2223.698) [-2123.900] -- 0:01:20 928000 -- (-2187.452) [-2112.261] (-2199.957) (-2127.646) * (-2119.089) (-2142.297) (-2236.180) [-2113.461] -- 0:01:19 929000 -- (-2189.317) [-2116.168] (-2218.318) (-2120.672) * [-2110.817] (-2148.772) (-2202.417) (-2111.667) -- 0:01:18 930000 -- (-2185.733) [-2117.495] (-2219.295) (-2126.703) * (-2115.750) (-2128.030) (-2215.131) [-2133.281] -- 0:01:17 Average standard deviation of split frequencies: 0.008341 931000 -- (-2203.501) [-2101.571] (-2197.027) (-2118.616) * (-2125.935) [-2126.779] (-2215.235) (-2123.042) -- 0:01:16 932000 -- (-2206.151) (-2123.149) (-2193.865) [-2110.322] * (-2133.086) [-2118.654] (-2208.760) (-2130.714) -- 0:01:15 933000 -- (-2199.577) (-2120.912) (-2185.752) [-2101.967] * [-2113.680] (-2128.203) (-2222.581) (-2126.991) -- 0:01:14 934000 -- (-2209.052) [-2100.246] (-2211.858) (-2110.211) * [-2108.786] (-2140.278) (-2244.293) (-2123.161) -- 0:01:13 935000 -- (-2195.175) [-2112.707] (-2208.732) (-2125.332) * [-2115.701] (-2124.622) (-2226.296) (-2141.750) -- 0:01:12 Average standard deviation of split frequencies: 0.008237 936000 -- (-2211.621) [-2109.263] (-2202.189) (-2115.810) * [-2106.642] (-2142.521) (-2220.681) (-2134.774) -- 0:01:10 937000 -- (-2201.923) [-2113.023] (-2194.193) (-2120.583) * [-2112.691] (-2150.594) (-2216.599) (-2123.158) -- 0:01:09 938000 -- (-2194.043) [-2116.660] (-2188.300) (-2116.180) * (-2139.082) (-2146.015) (-2225.717) [-2119.009] -- 0:01:08 939000 -- (-2190.971) [-2117.470] (-2194.918) (-2109.545) * (-2149.544) (-2120.545) (-2222.315) [-2113.351] -- 0:01:07 940000 -- (-2194.082) (-2127.383) (-2199.041) [-2112.987] * (-2136.722) [-2121.873] (-2217.888) (-2110.980) -- 0:01:06 Average standard deviation of split frequencies: 0.008085 941000 -- (-2203.625) [-2131.199] (-2201.337) (-2123.406) * (-2128.725) [-2101.554] (-2223.872) (-2113.929) -- 0:01:05 942000 -- (-2187.151) (-2131.956) (-2204.509) [-2126.056] * (-2139.353) [-2099.395] (-2214.837) (-2138.500) -- 0:01:04 943000 -- (-2203.364) [-2115.376] (-2190.757) (-2136.760) * (-2134.304) [-2103.067] (-2216.749) (-2132.404) -- 0:01:03 944000 -- (-2191.896) [-2126.917] (-2204.358) (-2119.980) * (-2120.865) [-2110.982] (-2209.071) (-2137.455) -- 0:01:02 945000 -- (-2207.595) (-2138.091) (-2207.886) [-2117.758] * (-2108.181) [-2113.604] (-2205.028) (-2124.221) -- 0:01:00 Average standard deviation of split frequencies: 0.007895 946000 -- (-2189.135) (-2140.783) (-2197.185) [-2119.296] * (-2111.117) [-2123.246] (-2223.117) (-2151.604) -- 0:00:59 947000 -- (-2193.603) [-2124.696] (-2204.943) (-2120.837) * (-2115.959) [-2139.093] (-2245.495) (-2130.903) -- 0:00:58 948000 -- (-2215.207) [-2109.767] (-2189.075) (-2118.008) * [-2117.260] (-2145.774) (-2239.282) (-2141.840) -- 0:00:57 949000 -- (-2207.653) [-2126.982] (-2207.254) (-2135.834) * [-2110.486] (-2166.043) (-2234.274) (-2137.421) -- 0:00:56 950000 -- (-2215.683) [-2124.705] (-2215.569) (-2116.081) * (-2111.546) (-2159.133) (-2210.775) [-2123.297] -- 0:00:55 Average standard deviation of split frequencies: 0.007622 951000 -- (-2192.309) [-2121.548] (-2201.053) (-2118.183) * [-2126.062] (-2167.355) (-2211.690) (-2140.829) -- 0:00:54 952000 -- (-2188.000) [-2111.505] (-2201.356) (-2108.973) * (-2119.869) (-2127.522) (-2204.396) [-2132.505] -- 0:00:53 953000 -- (-2185.505) (-2130.401) (-2200.869) [-2120.365] * (-2125.021) [-2125.785] (-2221.896) (-2136.167) -- 0:00:52 954000 -- (-2200.788) (-2134.335) (-2202.641) [-2110.564] * (-2156.381) [-2108.372] (-2218.265) (-2144.585) -- 0:00:51 955000 -- (-2208.903) (-2120.265) (-2195.325) [-2110.317] * (-2171.005) (-2117.049) (-2224.093) [-2121.879] -- 0:00:49 Average standard deviation of split frequencies: 0.007829 956000 -- (-2186.956) (-2130.215) (-2202.002) [-2113.899] * (-2172.480) [-2130.832] (-2208.239) (-2125.173) -- 0:00:48 957000 -- (-2205.405) [-2115.356] (-2217.878) (-2112.922) * (-2157.667) [-2110.098] (-2211.719) (-2146.864) -- 0:00:47 958000 -- (-2191.630) (-2116.085) (-2215.418) [-2112.556] * (-2152.160) [-2110.861] (-2216.571) (-2162.429) -- 0:00:46 959000 -- (-2204.889) [-2114.137] (-2215.129) (-2112.685) * (-2174.021) [-2118.448] (-2218.224) (-2135.973) -- 0:00:45 960000 -- (-2174.918) (-2127.833) (-2186.317) [-2110.969] * (-2149.378) (-2107.838) (-2222.013) [-2117.918] -- 0:00:44 Average standard deviation of split frequencies: 0.007829 961000 -- (-2174.136) [-2118.124] (-2188.151) (-2126.480) * (-2145.373) [-2108.969] (-2231.206) (-2120.982) -- 0:00:43 962000 -- (-2187.459) [-2119.899] (-2203.210) (-2128.298) * (-2150.419) [-2105.685] (-2223.973) (-2113.824) -- 0:00:42 963000 -- (-2179.743) [-2130.928] (-2213.755) (-2121.167) * (-2142.800) [-2105.354] (-2226.830) (-2119.988) -- 0:00:41 964000 -- (-2188.053) [-2122.040] (-2202.416) (-2122.999) * (-2139.714) (-2112.078) (-2224.329) [-2118.941] -- 0:00:39 965000 -- (-2201.577) [-2116.551] (-2187.632) (-2117.760) * (-2146.248) [-2110.827] (-2228.425) (-2116.141) -- 0:00:38 Average standard deviation of split frequencies: 0.007726 966000 -- (-2227.052) [-2131.303] (-2202.509) (-2129.429) * (-2146.623) (-2126.620) (-2211.066) [-2121.132] -- 0:00:37 967000 -- (-2214.123) [-2123.962] (-2190.771) (-2128.282) * (-2141.874) [-2115.134] (-2212.376) (-2113.802) -- 0:00:36 968000 -- (-2221.875) [-2118.127] (-2192.111) (-2117.456) * (-2138.294) [-2113.557] (-2227.617) (-2117.580) -- 0:00:35 969000 -- (-2229.771) [-2117.346] (-2191.957) (-2131.318) * (-2155.459) (-2120.123) (-2223.586) [-2120.400] -- 0:00:34 970000 -- (-2225.306) (-2133.775) (-2199.432) [-2124.447] * (-2139.576) [-2093.767] (-2238.634) (-2121.400) -- 0:00:33 Average standard deviation of split frequencies: 0.007727 971000 -- (-2232.143) [-2124.242] (-2201.698) (-2118.163) * (-2128.495) [-2105.161] (-2218.583) (-2122.193) -- 0:00:32 972000 -- (-2226.690) [-2120.536] (-2190.351) (-2137.955) * (-2125.567) (-2110.215) (-2208.999) [-2111.670] -- 0:00:31 973000 -- (-2211.816) [-2117.455] (-2182.184) (-2126.963) * (-2136.832) (-2110.579) (-2205.394) [-2111.387] -- 0:00:29 974000 -- (-2195.614) [-2122.339] (-2188.916) (-2133.080) * (-2157.924) (-2126.624) (-2203.125) [-2110.778] -- 0:00:28 975000 -- (-2200.009) [-2121.367] (-2193.844) (-2128.842) * (-2146.689) (-2127.396) (-2221.076) [-2108.132] -- 0:00:27 Average standard deviation of split frequencies: 0.007827 976000 -- (-2191.663) (-2129.859) (-2202.048) [-2110.898] * (-2146.018) (-2139.134) (-2222.117) [-2121.681] -- 0:00:26 977000 -- (-2185.137) (-2134.821) (-2183.828) [-2107.203] * (-2134.798) (-2128.747) (-2209.012) [-2114.108] -- 0:00:25 978000 -- (-2197.054) [-2126.302] (-2196.049) (-2125.012) * (-2132.644) (-2118.494) (-2218.083) [-2112.945] -- 0:00:24 979000 -- (-2192.971) (-2123.415) (-2191.388) [-2126.207] * (-2134.364) (-2153.959) (-2210.324) [-2104.839] -- 0:00:23 980000 -- (-2195.988) [-2119.750] (-2188.626) (-2123.357) * (-2137.150) (-2164.322) (-2202.050) [-2114.998] -- 0:00:22 Average standard deviation of split frequencies: 0.007899 981000 -- (-2177.072) (-2132.712) (-2185.311) [-2114.837] * (-2128.526) (-2143.521) (-2201.465) [-2123.465] -- 0:00:21 982000 -- (-2178.804) (-2121.027) (-2197.248) [-2118.917] * [-2108.036] (-2136.880) (-2218.861) (-2122.310) -- 0:00:19 983000 -- (-2181.162) (-2127.042) (-2214.413) [-2114.943] * [-2113.311] (-2122.773) (-2207.187) (-2120.526) -- 0:00:18 984000 -- (-2186.272) (-2129.091) (-2228.398) [-2119.191] * (-2123.138) (-2151.715) (-2192.935) [-2111.845] -- 0:00:17 985000 -- (-2178.367) [-2113.198] (-2192.276) (-2125.499) * [-2130.100] (-2158.957) (-2183.137) (-2120.344) -- 0:00:16 Average standard deviation of split frequencies: 0.007698 986000 -- (-2181.332) [-2105.831] (-2187.820) (-2122.535) * [-2115.677] (-2144.457) (-2193.077) (-2127.696) -- 0:00:15 987000 -- (-2187.931) (-2107.409) (-2197.612) [-2111.868] * [-2118.660] (-2175.424) (-2219.775) (-2130.811) -- 0:00:14 988000 -- (-2193.729) (-2108.216) (-2210.436) [-2106.005] * [-2109.641] (-2151.691) (-2213.662) (-2130.627) -- 0:00:13 989000 -- (-2189.094) (-2105.873) (-2197.299) [-2102.897] * [-2107.030] (-2163.645) (-2196.942) (-2126.088) -- 0:00:12 990000 -- (-2193.360) (-2128.358) (-2187.819) [-2109.663] * [-2123.440] (-2132.410) (-2207.792) (-2147.973) -- 0:00:11 Average standard deviation of split frequencies: 0.007966 991000 -- (-2195.485) [-2114.127] (-2189.032) (-2111.009) * [-2097.235] (-2128.955) (-2219.451) (-2172.147) -- 0:00:09 992000 -- (-2187.542) (-2126.690) (-2222.509) [-2120.747] * [-2109.490] (-2126.631) (-2230.275) (-2148.550) -- 0:00:08 993000 -- (-2189.014) [-2125.522] (-2214.888) (-2118.997) * (-2132.452) [-2107.082] (-2221.130) (-2161.891) -- 0:00:07 994000 -- (-2188.341) (-2118.747) (-2197.022) [-2126.601] * (-2128.591) [-2119.759] (-2215.252) (-2159.385) -- 0:00:06 995000 -- (-2196.674) [-2129.685] (-2202.478) (-2123.823) * (-2124.818) [-2109.396] (-2219.407) (-2161.498) -- 0:00:05 Average standard deviation of split frequencies: 0.008025 996000 -- (-2195.201) [-2127.861] (-2209.984) (-2138.630) * (-2134.821) [-2119.158] (-2227.653) (-2167.436) -- 0:00:04 997000 -- (-2181.188) (-2129.205) (-2204.927) [-2129.631] * (-2113.185) [-2115.844] (-2212.961) (-2145.491) -- 0:00:03 998000 -- (-2188.397) (-2137.968) (-2206.049) [-2113.750] * [-2128.302] (-2143.735) (-2216.397) (-2145.308) -- 0:00:02 999000 -- (-2184.238) (-2125.293) (-2209.925) [-2112.824] * [-2113.215] (-2133.825) (-2210.644) (-2136.489) -- 0:00:01 1000000 -- (-2192.652) (-2119.665) (-2191.019) [-2097.602] * [-2121.460] (-2147.620) (-2207.307) (-2133.586) -- 0:00:00 Average standard deviation of split frequencies: 0.007862 Analysis completed in 18 mins 31 seconds Analysis used 1110.56 seconds of CPU time Likelihood of best state for "cold" chain of run 1 was -2088.50 Likelihood of best state for "cold" chain of run 2 was -2091.37 Acceptance rates for the moves in the "cold" chain of run 1: With prob. (last 100) chain accepted proposals by move 53.3 % ( 60 %) Dirichlet(Revmat{all}) 70.1 % ( 60 %) Slider(Revmat{all}) 25.6 % ( 26 %) Dirichlet(Pi{all}) 28.1 % ( 33 %) Slider(Pi{all}) 61.1 % ( 34 %) Multiplier(Alpha{1,2}) 56.2 % ( 22 %) Multiplier(Alpha{3}) 45.5 % ( 23 %) Slider(Pinvar{all}) 43.4 % ( 45 %) ExtSPR(Tau{all},V{all}) 39.4 % ( 43 %) ExtTBR(Tau{all},V{all}) 53.8 % ( 59 %) NNI(Tau{all},V{all}) 18.1 % ( 21 %) ParsSPR(Tau{all},V{all}) 27.6 % ( 31 %) Multiplier(V{all}) 73.0 % ( 78 %) Nodeslider(V{all}) 25.9 % ( 21 %) TLMultiplier(V{all}) Acceptance rates for the moves in the "cold" chain of run 2: With prob. (last 100) chain accepted proposals by move 52.9 % ( 49 %) Dirichlet(Revmat{all}) 70.8 % ( 63 %) Slider(Revmat{all}) 24.9 % ( 24 %) Dirichlet(Pi{all}) 27.7 % ( 26 %) Slider(Pi{all}) 60.6 % ( 33 %) Multiplier(Alpha{1,2}) 56.6 % ( 17 %) Multiplier(Alpha{3}) 44.6 % ( 18 %) Slider(Pinvar{all}) 43.7 % ( 51 %) ExtSPR(Tau{all},V{all}) 39.8 % ( 40 %) ExtTBR(Tau{all},V{all}) 54.2 % ( 54 %) NNI(Tau{all},V{all}) 18.6 % ( 17 %) ParsSPR(Tau{all},V{all}) 27.4 % ( 25 %) Multiplier(V{all}) 72.8 % ( 80 %) Nodeslider(V{all}) 26.1 % ( 19 %) TLMultiplier(V{all}) Chain swap information for run 1: 1 2 3 4 ---------------------------------- 1 | 0.12 0.00 0.00 2 | 166829 0.06 0.00 3 | 166371 167018 0.09 4 | 166612 166843 166327 Chain swap information for run 2: 1 2 3 4 ---------------------------------- 1 | 0.14 0.00 0.00 2 | 167340 0.11 0.00 3 | 166113 166766 0.00 4 | 166927 166690 166164 Upper diagonal: Proportion of successful state exchanges between chains Lower diagonal: Number of attempted state exchanges between chains Chain information: ID -- Heat ----------- 1 -- 1.00 (cold chain) 2 -- 0.91 3 -- 0.83 4 -- 0.77 Heat = 1 / (1 + T * (ID - 1)) (where T = 0.10 is the temperature and ID is the chain number) Setting burn-in to 2500 Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p Writing summary statistics to file /data/mrbayes_input.nex.pstat Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples Below are rough plots of the generation (x-axis) versus the log probability of observing the data (y-axis). You can use these graphs to determine what the burn in for your analysis should be. When the log probability starts to plateau you may be at station- arity. Sample trees and parameters after the log probability plateaus. Of course, this is not a guarantee that you are at sta- tionarity. Also examine the convergence diagnostics provided by the 'sump' and 'sumt' commands for all the parameters in your model. Remember that the burn in is the number of samples to dis- card. There are a total of ngen / samplefreq samples taken during a MCMC analysis. Overlay plot for both runs: (1 = Run number 1; 2 = Run number 2; * = Both runs) +------------------------------------------------------------+ -2109.69 | 1 1 | | 1 2 | | 1 1 1 1 12 2 | | 2 1 1 2 1 1 | | 2 12 122 1 * 1 1 1 12 1 2 11 2 12| |2 2 2 22211 2 2 2 1 1 1 2* 1 2 1 2 | | 1 1 22 12 222 2 21 22 2 2 1| |1 1 2 22 1 *1 1 1 * 1 22 1 | | 2 12 2 2 22 2 2 | | 1 1 2 2 1 1 | | 11 1 * 1 | | 2 2 | | 1 | | 1 1 | | 2 | +------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -2126.03 ^ ^ 250000 1000000 Estimated marginal likelihoods for runs sampled in files "/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p": (Use the harmonic mean for Bayes factor comparisons of models) (Values are saved to the file /data/mrbayes_input.nex.lstat) Run Arithmetic mean Harmonic mean -------------------------------------- 1 -2097.22 -2139.03 2 -2099.94 -2145.49 -------------------------------------- TOTAL -2097.85 -2144.79 -------------------------------------- Model parameter summaries over the runs sampled in files "/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p": Summaries are based on a total of 3002 samples from 2 runs. Each run produced 2001 samples of which 1501 samples were included. Parameter summaries saved to file "/data/mrbayes_input.nex.pstat". 95% HPD Interval -------------------- Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+ ------------------------------------------------------------------------------------------------------ TL{all} 0.121762 0.000452 0.082417 0.163924 0.119395 1224.63 1295.17 1.000 r(A<->C){all} 0.036930 0.000290 0.007778 0.070578 0.034212 548.47 628.30 1.005 r(A<->G){all} 0.143694 0.001842 0.058376 0.221296 0.139887 368.13 385.55 1.002 r(A<->T){all} 0.017861 0.000186 0.000015 0.044216 0.014616 534.02 582.81 1.000 r(C<->G){all} 0.051341 0.000480 0.012952 0.094670 0.047920 438.95 477.01 1.004 r(C<->T){all} 0.631295 0.003540 0.516674 0.747977 0.634019 268.50 330.69 1.002 r(G<->T){all} 0.118878 0.001465 0.053980 0.197599 0.115282 378.78 403.24 1.000 pi(A){all} 0.280643 0.000191 0.255478 0.308041 0.280310 957.53 990.51 1.000 pi(C){all} 0.280058 0.000197 0.252006 0.305980 0.280046 801.86 883.78 1.000 pi(G){all} 0.221857 0.000165 0.196801 0.246189 0.221988 975.87 998.97 1.000 pi(T){all} 0.217442 0.000149 0.193967 0.241652 0.217605 950.57 971.26 1.000 alpha{1,2} 0.341303 0.118259 0.001403 0.892384 0.257964 760.21 789.09 1.001 alpha{3} 1.562205 0.942564 0.215596 3.538191 1.339592 854.23 868.24 1.001 pinvar{all} 0.771215 0.004087 0.644307 0.871751 0.783929 502.94 553.43 1.000 ------------------------------------------------------------------------------------------------------ * Convergence diagnostic (ESS = Estimated Sample Size); min and avg values correspond to minimal and average ESS among runs. ESS value below 100 may indicate that the parameter is undersampled. + Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman and Rubin, 1992) should approach 1.0 as runs converge. Setting sumt conformat to Simple Setting urn-in to 2500 Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t" Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con> Examining first file ... Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block Expecting the same number of trees in the last tree block of all files Tree reading status: 0 10 20 30 40 50 60 70 80 90 100 v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v ********************************************************************************* Read a total of 4002 trees in 2 files (sampling 3002 of them) (Each file contained 2001 trees of which 1501 were sampled) General explanation: In an unrooted tree, a taxon bipartition (split) is specified by removing a branch, thereby dividing the species into those to the left and those to the right of the branch. Here, taxa to one side of the removed branch are denoted '.' and those to the other side are denoted '*'. Specifically, the '.' symbol is used for the taxa on the same side as the outgroup. In a rooted or clock tree, the tree is rooted using the model and not by reference to an outgroup. Each bipartition therefore corresponds to a clade, that is, a group that includes all the descendants of a particular branch in the tree. Taxa that are included in each clade are denoted using '*', and taxa that are not included are denoted using the '.' symbol. The output first includes a key to all the bipartitions with frequency larger or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to sumt command and currently it is set to 0.10. This is followed by a table with statistics for the informative bipartitions (those including at least two taxa), sorted from highest to lowest probability. For each bipartition, the table gives the number of times the partition or split was observed in all runs (#obs) and the posterior probability of the bipartition (Probab.), which is the same as the split frequency. If several runs are summarized, this is followed by the minimum split frequency (Min(s)), the maximum frequency (Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs. The latter value should approach 0 for all bipartitions as MCMC runs converge. This is followed by a table summarizing branch lengths, node heights (if a clock model was used) and relaxed clock parameters (if a relaxed clock model was used). The mean, variance, and 95 % credible interval are given for each of these parameters. If several runs are summarized, the potential scale reduction factor (PSRF) is also given; it should approach 1 as runs converge. Node heights will take calibration points into account, if such points were used in the analysis. Note that Stddev may be unreliable if the partition is not present in all runs (the last column indicates the number of runs that sampled the partition if more than one run is summarized). The PSRF is not calculated at all if the partition is not present in all runs.The PSRF is also sensitive to small sample sizes and it should only be considered a rough guide to convergence since some of the assumptions allowing one to interpret it as a true potential scale reduction factor are violated in MrBayes. List of taxa in bipartitions: 1 -- C1 2 -- C10 3 -- C11 4 -- C12 5 -- C13 6 -- C14 7 -- C15 8 -- C16 9 -- C17 10 -- C18 11 -- C19 12 -- C2 13 -- C20 14 -- C21 15 -- C22 16 -- C23 17 -- C24 18 -- C25 19 -- C26 20 -- C27 21 -- C28 22 -- C29 23 -- C3 24 -- C30 25 -- C31 26 -- C32 27 -- C33 28 -- C34 29 -- C35 30 -- C36 31 -- C37 32 -- C38 33 -- C39 34 -- C4 35 -- C40 36 -- C41 37 -- C42 38 -- C43 39 -- C44 40 -- C45 41 -- C46 42 -- C47 43 -- C48 44 -- C49 45 -- C5 46 -- C50 47 -- C51 48 -- C52 49 -- C53 50 -- C54 51 -- C55 52 -- C56 53 -- C57 54 -- C58 55 -- C6 56 -- C7 57 -- C8 58 -- C9 Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"): ID -- Partition ----------------------------------------------------------------- 1 -- .********************************************************* 2 -- .*........................................................ 3 -- ..*....................................................... 4 -- ...*...................................................... 5 -- ....*..................................................... 6 -- .....*.................................................... 7 -- ......*................................................... 8 -- .......*.................................................. 9 -- ........*................................................. 10 -- .........*................................................ 11 -- ..........*............................................... 12 -- ...........*.............................................. 13 -- ............*............................................. 14 -- .............*............................................ 15 -- ..............*........................................... 16 -- ...............*.......................................... 17 -- ................*......................................... 18 -- .................*........................................ 19 -- ..................*....................................... 20 -- ...................*...................................... 21 -- ....................*..................................... 22 -- .....................*.................................... 23 -- ......................*................................... 24 -- .......................*.................................. 25 -- ........................*................................. 26 -- .........................*................................ 27 -- ..........................*............................... 28 -- ...........................*.............................. 29 -- ............................*............................. 30 -- .............................*............................ 31 -- ..............................*........................... 32 -- ...............................*.......................... 33 -- ................................*......................... 34 -- .................................*........................ 35 -- ..................................*....................... 36 -- ...................................*...................... 37 -- ....................................*..................... 38 -- .....................................*.................... 39 -- ......................................*................... 40 -- .......................................*.................. 41 -- ........................................*................. 42 -- .........................................*................ 43 -- ..........................................*............... 44 -- ...........................................*.............. 45 -- ............................................*............. 46 -- .............................................*............ 47 -- ..............................................*........... 48 -- ...............................................*.......... 49 -- ................................................*......... 50 -- .................................................*........ 51 -- ..................................................*....... 52 -- ...................................................*...... 53 -- ....................................................*..... 54 -- .....................................................*.... 55 -- ......................................................*... 56 -- .......................................................*.. 57 -- ........................................................*. 58 -- .........................................................* 59 -- ..........*....**..............*.......................... 60 -- ...............**......................................... 61 -- .................*.*...................................... 62 -- ..................*....*.................................. 63 -- .*.*****.*..*.*...*.**.********.*.**********.*********...* 64 -- .*.*****.*..***...*.**.********.************.*********..** 65 -- ............................*..............*.*............ 66 -- ..................*....*......*....*.*..........*.*....... 67 -- ....*.**....*.*.....**..******..*.*.*.*..*.*.*.*.*.***...* 68 -- .............*...................*........................ 69 -- ..........*....................*.......................... 70 -- ......*..........................................*........ 71 -- ...........................................*.*............ 72 -- ..................................*................*.*.... 73 -- .*.***************************************************.*** 74 -- .......*............................*..................... 75 -- ...*....................................*................. 76 -- ....................*...*................................. 77 -- ........*.**...**.....*........*.......................*.. 78 -- .....................*...*.*.*............................ 79 -- ..........*....**.....*........*.......................*.. 80 -- ............*.............*.*.....*......*.*.*.....*.*.... 81 -- ..........**...**.....*........*.......................*.. 82 -- .............*...................*......................*. 83 -- .*.*.*...*........*....*......*....*.*.**.*...*.*.*....... 84 -- ......................*................................*.. 85 -- .*.******************************************************* 86 -- .*****************************************************.*** 87 -- .*.**************.*.**********************************.*** 88 -- ...................................................*.*.... 89 -- ..................................*................*...... 90 -- ..................................*..................*.... 91 -- ..........*....**.....*........*.......................... 92 -- .*.*****.*..***...*.**.********.**********************..** 93 -- ........*.**...***.*..*........*.......................*.. 94 -- .....................*...*...*............................ 95 -- .....................*...*................................ 96 -- .....................*...*.*.............................. 97 -- .....................*.......*............................ 98 -- .....................*.....*.............................. 99 -- .........................*.*.............................. 100 -- .........................*.*.*............................ 101 -- .....................*.....*.*............................ 102 -- ...........................*.*............................ 103 -- .........................*...*............................ 104 -- ........*.**...***.*..*........*............*..........*.. 105 -- .*.**************.*.************************.*********.*** 106 -- ........*.**...**.....*........*............*..........*.. 107 -- .*.*****************************************.*********.*** 108 -- ............*.............*.......*......*.........*.*.... 109 -- ............................*............*.*.*............ 110 -- ............*...............*.....*......*.*.*.....*.*.... 111 -- ............*...............*..............*.*............ 112 -- ............*.....................*................*.*.... 113 -- .*.*****.*..*.*...*.**.********.*.**********.*********..** 114 -- ............*.............*............................... 115 -- ..........................*..............*................ 116 -- ............*.............*.*............*.*.*............ 117 -- ..........................*.......*................*.*.... 118 -- ............*............................*................ 119 -- .*.*****.*..***..*****.********.**********************..** 120 -- ..................................*......*.........*.*.... 121 -- ..........................*.*..............*.*............ 122 -- ..................*....*...........*...................... 123 -- ............................*.....*........*.*.....*.*.... 124 -- ..................*....*..........................*....... 125 -- ............*.............*.*.....*........*.*.....*.*.... 126 -- ..............................*...................*....... 127 -- ..........................*.*.....*......*.*.*.....*.*.... 128 -- ..................*....*........................*......... 129 -- ...................................*.*.................... 130 -- ..............................*....*...................... 131 -- ..................*....*......*....*............*.*....... 132 -- ..................*....*......*....*.*..........*......... 133 -- ................................................*.*....... 134 -- ..................*....*.............*.................... 135 -- .*.*****.*..***...*.**.********.************.*********...* 136 -- ..................*....*......*......*..........*.*....... 137 -- ..............................*......*.................... 138 -- ...................................*..............*....... 139 -- ..................*....*...........*.*..........*.*....... 140 -- ..............................*.................*......... 141 -- .....................................*..........*......... 142 -- ..................*....*......*....*.*............*....... 143 -- ..............................*....*.*..........*.*....... 144 -- ..................*....*......*........................... 145 -- .....................................*............*....... 146 -- .*.*****.*..***..*****.********.************.*********..** 147 -- ...................................*............*......... 148 -- ........*..*.............................................. ----------------------------------------------------------------- Summary statistics for informative taxon bipartitions (saved to file "/data/mrbayes_input.nex.tstat"): ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns ----------------------------------------------------------------- 59 3002 1.000000 0.000000 1.000000 1.000000 2 60 3002 1.000000 0.000000 1.000000 1.000000 2 61 3002 1.000000 0.000000 1.000000 1.000000 2 62 3002 1.000000 0.000000 1.000000 1.000000 2 63 2992 0.996669 0.003769 0.994004 0.999334 2 64 2982 0.993338 0.000942 0.992672 0.994004 2 65 2962 0.986676 0.008480 0.980680 0.992672 2 66 2945 0.981013 0.011777 0.972685 0.989340 2 67 2922 0.973351 0.002827 0.971352 0.975350 2 68 2915 0.971019 0.002355 0.969354 0.972685 2 69 2902 0.966689 0.001884 0.965356 0.968021 2 70 2857 0.951699 0.009893 0.944704 0.958694 2 71 2852 0.950033 0.002827 0.948035 0.952032 2 72 2852 0.950033 0.003769 0.947368 0.952698 2 73 2773 0.923718 0.012719 0.914724 0.932712 2 74 2715 0.904397 0.006124 0.900067 0.908728 2 75 2651 0.883078 0.026852 0.864091 0.902065 2 76 2624 0.874084 0.031092 0.852099 0.896069 2 77 2468 0.822119 0.000942 0.821452 0.822785 2 78 2453 0.817122 0.016488 0.805463 0.828781 2 79 2448 0.815456 0.031092 0.793471 0.837442 2 80 2430 0.809460 0.011306 0.801466 0.817455 2 81 2255 0.751166 0.041927 0.721519 0.780813 2 82 2238 0.745503 0.009422 0.738841 0.752165 2 83 2015 0.671219 0.014604 0.660893 0.681546 2 84 1828 0.608927 0.004711 0.605596 0.612258 2 85 1659 0.552632 0.013662 0.542971 0.562292 2 86 1187 0.395403 0.013662 0.385743 0.405063 2 87 1091 0.363424 0.032505 0.340440 0.386409 2 88 1053 0.350766 0.024026 0.333777 0.367755 2 89 976 0.325117 0.009422 0.318454 0.331779 2 90 954 0.317788 0.010364 0.310460 0.325117 2 91 855 0.284810 0.008009 0.279147 0.290473 2 92 726 0.241839 0.005653 0.237841 0.245836 2 93 677 0.225516 0.024968 0.207861 0.243171 2 94 632 0.210526 0.003769 0.207861 0.213191 2 95 607 0.202199 0.003298 0.199867 0.204530 2 96 600 0.199867 0.001884 0.198534 0.201199 2 97 590 0.196536 0.010364 0.189207 0.203864 2 98 589 0.196203 0.005182 0.192538 0.199867 2 99 572 0.190540 0.001884 0.189207 0.191872 2 100 560 0.186542 0.005653 0.182545 0.190540 2 101 559 0.186209 0.006124 0.181879 0.190540 2 102 548 0.182545 0.003769 0.179880 0.185210 2 103 543 0.180879 0.003298 0.178548 0.183211 2 104 536 0.178548 0.012248 0.169887 0.187209 2 105 510 0.169887 0.005653 0.165889 0.173884 2 106 502 0.167222 0.009422 0.160560 0.173884 2 107 474 0.157895 0.016017 0.146569 0.169221 2 108 453 0.150899 0.015546 0.139907 0.161892 2 109 436 0.145237 0.000942 0.144570 0.145903 2 110 424 0.141239 0.001884 0.139907 0.142572 2 111 423 0.140906 0.004240 0.137908 0.143904 2 112 423 0.140906 0.012719 0.131912 0.149900 2 113 420 0.139907 0.013191 0.130580 0.149234 2 114 417 0.138907 0.002355 0.137242 0.140573 2 115 415 0.138241 0.007066 0.133245 0.143238 2 116 411 0.136909 0.001413 0.135909 0.137908 2 117 411 0.136909 0.002355 0.135243 0.138574 2 118 409 0.136243 0.000471 0.135909 0.136576 2 119 404 0.134577 0.013191 0.125250 0.143904 2 120 396 0.131912 0.000942 0.131246 0.132578 2 121 390 0.129913 0.002827 0.127915 0.131912 2 122 376 0.125250 0.006595 0.120586 0.129913 2 123 371 0.123584 0.004240 0.120586 0.126582 2 124 366 0.121919 0.009422 0.115256 0.128581 2 125 365 0.121586 0.021199 0.106596 0.136576 2 126 354 0.117921 0.005653 0.113924 0.121919 2 127 353 0.117588 0.000471 0.117255 0.117921 2 128 352 0.117255 0.002827 0.115256 0.119254 2 129 351 0.116922 0.000471 0.116589 0.117255 2 130 344 0.114590 0.000942 0.113924 0.115256 2 131 339 0.112925 0.005182 0.109260 0.116589 2 132 336 0.111925 0.000000 0.111925 0.111925 2 133 332 0.110593 0.002827 0.108594 0.112592 2 134 332 0.110593 0.008480 0.104597 0.116589 2 135 323 0.107595 0.002355 0.105929 0.109260 2 136 323 0.107595 0.001413 0.106596 0.108594 2 137 323 0.107595 0.008951 0.101266 0.113924 2 138 322 0.107262 0.000000 0.107262 0.107262 2 139 322 0.107262 0.000942 0.106596 0.107928 2 140 321 0.106929 0.003298 0.104597 0.109260 2 141 319 0.106262 0.000471 0.105929 0.106596 2 142 316 0.105263 0.005653 0.101266 0.109260 2 143 314 0.104597 0.002827 0.102598 0.106596 2 144 312 0.103931 0.002827 0.101932 0.105929 2 145 304 0.101266 0.011306 0.093271 0.109260 2 146 292 0.097268 0.004711 0.093937 0.100600 2 147 291 0.096935 0.005182 0.093271 0.100600 2 148 252 0.083944 0.023555 0.067288 0.100600 2 ----------------------------------------------------------------- + Convergence diagnostic (standard deviation of split frequencies) should approach 0.0 as runs converge. Summary statistics for branch and node parameters (saved to file "/data/mrbayes_input.nex.vstat"): 95% HPD Interval -------------------- Parameter Mean Variance Lower Upper Median PSRF+ Nruns -------------------------------------------------------------------------------------------- length{all}[1] 0.000725 0.000000 0.000000 0.002106 0.000518 1.005 2 length{all}[2] 0.000576 0.000000 0.000001 0.001718 0.000402 1.000 2 length{all}[3] 0.000833 0.000001 0.000002 0.002379 0.000635 1.000 2 length{all}[4] 0.001188 0.000001 0.000020 0.002789 0.000978 1.001 2 length{all}[5] 0.000604 0.000000 0.000000 0.001800 0.000426 1.000 2 length{all}[6] 0.000582 0.000000 0.000000 0.001722 0.000407 1.001 2 length{all}[7] 0.000589 0.000000 0.000000 0.001858 0.000397 1.000 2 length{all}[8] 0.000623 0.000000 0.000000 0.001861 0.000425 1.000 2 length{all}[9] 0.002946 0.000002 0.000571 0.005619 0.002734 1.000 2 length{all}[10] 0.000581 0.000000 0.000000 0.001774 0.000398 1.000 2 length{all}[11] 0.000700 0.000000 0.000000 0.002051 0.000517 1.000 2 length{all}[12] 0.001230 0.000001 0.000002 0.003098 0.001018 1.000 2 length{all}[13] 0.000561 0.000000 0.000001 0.001696 0.000377 1.000 2 length{all}[14] 0.002085 0.000002 0.000175 0.004495 0.001805 1.000 2 length{all}[15] 0.000563 0.000000 0.000001 0.001724 0.000378 1.000 2 length{all}[16] 0.000564 0.000000 0.000001 0.001788 0.000366 1.000 2 length{all}[17] 0.000581 0.000000 0.000000 0.001793 0.000412 1.000 2 length{all}[18] 0.000575 0.000000 0.000001 0.001646 0.000411 1.001 2 length{all}[19] 0.000574 0.000000 0.000000 0.001806 0.000380 1.004 2 length{all}[20] 0.000554 0.000000 0.000000 0.001704 0.000364 1.000 2 length{all}[21] 0.000617 0.000000 0.000000 0.001823 0.000410 1.000 2 length{all}[22] 0.000586 0.000000 0.000000 0.001858 0.000390 1.000 2 length{all}[23] 0.005203 0.000004 0.001704 0.009051 0.004967 1.000 2 length{all}[24] 0.000580 0.000000 0.000000 0.001764 0.000391 1.000 2 length{all}[25] 0.000598 0.000000 0.000001 0.001874 0.000395 1.000 2 length{all}[26] 0.000585 0.000000 0.000000 0.001815 0.000401 1.000 2 length{all}[27] 0.000560 0.000000 0.000000 0.001680 0.000384 1.000 2 length{all}[28] 0.001182 0.000001 0.000021 0.002843 0.000994 1.000 2 length{all}[29] 0.001154 0.000001 0.000009 0.002671 0.000975 1.000 2 length{all}[30] 0.000588 0.000000 0.000000 0.001799 0.000386 1.000 2 length{all}[31] 0.000612 0.000000 0.000000 0.001845 0.000412 1.000 2 length{all}[32] 0.001507 0.000001 0.000009 0.003445 0.001302 1.000 2 length{all}[33] 0.001138 0.000001 0.000001 0.002756 0.000943 1.004 2 length{all}[34] 0.001498 0.000001 0.000018 0.003374 0.001282 1.001 2 length{all}[35] 0.002241 0.000001 0.000442 0.004655 0.002006 1.000 2 length{all}[36] 0.000565 0.000000 0.000000 0.001675 0.000399 1.000 2 length{all}[37] 0.000590 0.000000 0.000000 0.001810 0.000393 1.000 2 length{all}[38] 0.000550 0.000000 0.000000 0.001673 0.000359 1.001 2 length{all}[39] 0.000572 0.000000 0.000000 0.001706 0.000387 1.000 2 length{all}[40] 0.000567 0.000000 0.000000 0.001749 0.000390 1.000 2 length{all}[41] 0.000637 0.000000 0.000000 0.001893 0.000434 1.000 2 length{all}[42] 0.000585 0.000000 0.000000 0.001786 0.000393 1.000 2 length{all}[43] 0.000556 0.000000 0.000000 0.001699 0.000381 1.002 2 length{all}[44] 0.000592 0.000000 0.000000 0.001824 0.000410 1.001 2 length{all}[45] 0.002088 0.000002 0.000185 0.004378 0.001838 1.001 2 length{all}[46] 0.000592 0.000000 0.000001 0.001861 0.000405 1.000 2 length{all}[47] 0.000605 0.000000 0.000000 0.001850 0.000419 1.000 2 length{all}[48] 0.000572 0.000000 0.000001 0.001751 0.000394 1.000 2 length{all}[49] 0.000547 0.000000 0.000000 0.001661 0.000379 1.001 2 length{all}[50] 0.000581 0.000000 0.000000 0.001765 0.000422 1.000 2 length{all}[51] 0.000570 0.000000 0.000000 0.001784 0.000373 1.002 2 length{all}[52] 0.001140 0.000001 0.000010 0.002794 0.000918 1.000 2 length{all}[53] 0.000551 0.000000 0.000000 0.001638 0.000381 1.000 2 length{all}[54] 0.000572 0.000000 0.000000 0.001751 0.000390 1.000 2 length{all}[55] 0.002657 0.000002 0.000421 0.005322 0.002433 1.001 2 length{all}[56] 0.000701 0.000000 0.000000 0.002086 0.000480 1.000 2 length{all}[57] 0.001571 0.000001 0.000028 0.003675 0.001345 1.003 2 length{all}[58] 0.000564 0.000000 0.000000 0.001728 0.000400 1.001 2 length{all}[59] 0.006496 0.000006 0.002387 0.011526 0.006152 1.003 2 length{all}[60] 0.007710 0.000007 0.003071 0.012696 0.007368 1.000 2 length{all}[61] 0.003851 0.000003 0.000969 0.007149 0.003543 1.001 2 length{all}[62] 0.001718 0.000001 0.000193 0.003929 0.001506 1.000 2 length{all}[63] 0.002290 0.000002 0.000217 0.005079 0.001981 1.000 2 length{all}[64] 0.001840 0.000001 0.000207 0.004118 0.001563 1.000 2 length{all}[65] 0.001202 0.000001 0.000037 0.002902 0.000973 1.000 2 length{all}[66] 0.001152 0.000001 0.000028 0.002768 0.000971 1.001 2 length{all}[67] 0.001357 0.000001 0.000014 0.003166 0.001154 1.000 2 length{all}[68] 0.001787 0.000001 0.000066 0.003905 0.001555 1.000 2 length{all}[69] 0.002254 0.000002 0.000195 0.004703 0.002040 1.000 2 length{all}[70] 0.001140 0.000001 0.000020 0.002816 0.000940 1.000 2 length{all}[71] 0.001141 0.000001 0.000012 0.002765 0.000944 1.000 2 length{all}[72] 0.001143 0.000001 0.000023 0.002739 0.000931 1.000 2 length{all}[73] 0.002189 0.000001 0.000300 0.004621 0.001973 1.000 2 length{all}[74] 0.001114 0.000001 0.000027 0.002770 0.000912 1.000 2 length{all}[75] 0.001100 0.000001 0.000001 0.002720 0.000904 1.000 2 length{all}[76] 0.001150 0.000001 0.000004 0.002710 0.000950 1.000 2 length{all}[77] 0.001239 0.000001 0.000021 0.003027 0.001012 1.000 2 length{all}[78] 0.001089 0.000001 0.000005 0.002700 0.000893 1.000 2 length{all}[79] 0.001376 0.000001 0.000001 0.003429 0.001144 1.000 2 length{all}[80] 0.001147 0.000001 0.000015 0.002790 0.000947 1.001 2 length{all}[81] 0.001178 0.000001 0.000002 0.002945 0.000963 1.000 2 length{all}[82] 0.001249 0.000001 0.000001 0.003107 0.001028 1.001 2 length{all}[83] 0.001177 0.000001 0.000028 0.002973 0.000945 1.001 2 length{all}[84] 0.001217 0.000001 0.000000 0.003096 0.000990 1.000 2 length{all}[85] 0.001392 0.000001 0.000000 0.003540 0.001125 1.000 2 length{all}[86] 0.001174 0.000001 0.000000 0.002895 0.000955 1.000 2 length{all}[87] 0.001224 0.000001 0.000000 0.002872 0.001004 0.999 2 length{all}[88] 0.000605 0.000000 0.000000 0.001778 0.000417 0.999 2 length{all}[89] 0.000563 0.000000 0.000000 0.001756 0.000380 1.001 2 length{all}[90] 0.000595 0.000000 0.000000 0.001865 0.000389 0.999 2 length{all}[91] 0.001132 0.000001 0.000005 0.003220 0.000872 0.999 2 length{all}[92] 0.000792 0.000001 0.000000 0.002483 0.000541 1.001 2 length{all}[93] 0.001029 0.000001 0.000003 0.002744 0.000766 0.999 2 length{all}[94] 0.000705 0.000001 0.000001 0.002142 0.000495 0.998 2 length{all}[95] 0.000568 0.000000 0.000000 0.001753 0.000386 0.999 2 length{all}[96] 0.000610 0.000000 0.000001 0.001773 0.000427 1.000 2 length{all}[97] 0.000570 0.000000 0.000000 0.001801 0.000404 0.998 2 length{all}[98] 0.000649 0.000000 0.000001 0.002069 0.000448 0.998 2 length{all}[99] 0.000567 0.000000 0.000001 0.001709 0.000386 1.002 2 length{all}[100] 0.000587 0.000000 0.000002 0.001646 0.000402 0.998 2 length{all}[101] 0.000661 0.000000 0.000002 0.001947 0.000464 0.998 2 length{all}[102] 0.000593 0.000000 0.000002 0.001760 0.000448 1.001 2 length{all}[103] 0.000632 0.000000 0.000000 0.001917 0.000433 0.998 2 length{all}[104] 0.000956 0.000001 0.000006 0.002249 0.000772 1.001 2 length{all}[105] 0.000732 0.000001 0.000000 0.002074 0.000549 0.999 2 length{all}[106] 0.000707 0.000000 0.000002 0.002028 0.000487 0.998 2 length{all}[107] 0.001122 0.000001 0.000002 0.002873 0.000931 0.998 2 length{all}[108] 0.000654 0.000001 0.000000 0.002062 0.000390 0.998 2 length{all}[109] 0.000612 0.000000 0.000000 0.001818 0.000390 0.999 2 length{all}[110] 0.000605 0.000000 0.000002 0.001852 0.000417 0.998 2 length{all}[111] 0.000627 0.000000 0.000003 0.001767 0.000454 0.998 2 length{all}[112] 0.000584 0.000000 0.000000 0.001813 0.000416 0.998 2 length{all}[113] 0.000706 0.000000 0.000000 0.002056 0.000477 0.998 2 length{all}[114] 0.000605 0.000000 0.000003 0.001896 0.000385 0.999 2 length{all}[115] 0.000515 0.000000 0.000002 0.001505 0.000355 1.007 2 length{all}[116] 0.000629 0.000000 0.000002 0.001993 0.000443 1.001 2 length{all}[117] 0.000540 0.000000 0.000001 0.001599 0.000352 1.004 2 length{all}[118] 0.000557 0.000000 0.000000 0.001647 0.000377 1.010 2 length{all}[119] 0.001005 0.000001 0.000008 0.002408 0.000770 0.998 2 length{all}[120] 0.000554 0.000000 0.000003 0.001819 0.000365 0.998 2 length{all}[121] 0.000524 0.000000 0.000005 0.001613 0.000323 1.003 2 length{all}[122] 0.000560 0.000000 0.000000 0.001617 0.000378 0.997 2 length{all}[123] 0.000644 0.000000 0.000000 0.001850 0.000496 1.001 2 length{all}[124] 0.000655 0.000000 0.000002 0.001903 0.000442 0.998 2 length{all}[125] 0.000622 0.000000 0.000001 0.002063 0.000454 0.997 2 length{all}[126] 0.000547 0.000000 0.000001 0.001596 0.000370 0.999 2 length{all}[127] 0.000609 0.000000 0.000002 0.001756 0.000417 0.997 2 length{all}[128] 0.000565 0.000000 0.000001 0.001707 0.000377 1.009 2 length{all}[129] 0.000552 0.000000 0.000001 0.001556 0.000406 0.997 2 length{all}[130] 0.000554 0.000000 0.000000 0.001716 0.000356 0.998 2 length{all}[131] 0.000590 0.000000 0.000002 0.001695 0.000402 0.997 2 length{all}[132] 0.000616 0.000000 0.000004 0.001892 0.000458 1.002 2 length{all}[133] 0.000552 0.000000 0.000000 0.001858 0.000365 1.044 2 length{all}[134] 0.000624 0.000000 0.000001 0.002001 0.000423 1.002 2 length{all}[135] 0.000736 0.000001 0.000001 0.002288 0.000481 0.998 2 length{all}[136] 0.000584 0.000000 0.000000 0.001911 0.000376 1.006 2 length{all}[137] 0.000534 0.000000 0.000000 0.001592 0.000347 1.018 2 length{all}[138] 0.000616 0.000000 0.000000 0.001656 0.000461 0.999 2 length{all}[139] 0.000563 0.000000 0.000001 0.001773 0.000422 1.001 2 length{all}[140] 0.000532 0.000000 0.000000 0.001710 0.000308 1.006 2 length{all}[141] 0.000586 0.000000 0.000000 0.001912 0.000366 1.016 2 length{all}[142] 0.000547 0.000000 0.000001 0.001539 0.000394 1.007 2 length{all}[143] 0.000601 0.000000 0.000002 0.001916 0.000377 1.000 2 length{all}[144] 0.000541 0.000000 0.000001 0.001552 0.000408 1.004 2 length{all}[145] 0.000692 0.000000 0.000001 0.001960 0.000493 1.002 2 length{all}[146] 0.000615 0.000000 0.000006 0.001869 0.000417 0.998 2 length{all}[147] 0.000571 0.000000 0.000000 0.001632 0.000395 1.001 2 length{all}[148] 0.000616 0.000000 0.000003 0.001780 0.000408 0.998 2 -------------------------------------------------------------------------------------------- + Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when deviation of parameter values within all runs is 0 or when a parameter value (a branch length, for instance) is not sampled in all runs. Summary statistics for partitions with frequency >= 0.10 in at least one run: Average standard deviation of split frequencies = 0.007862 Maximum standard deviation of split frequencies = 0.041927 Average PSRF for parameter values (excluding NA and >10.0) = 1.001 Maximum PSRF for parameter values = 1.044 Clade credibility values: /---------------------------------------------------------------------- C1 (1) | |---------------------------------------------------------------------- C11 (3) | | /----------------------- C10 (2) | | | | /-------- C12 (4) | |------88------+ | | \-------- C46 (41) | | | |----------------------- C14 (6) | | | |----------------------- C18 (10) | | | | /-------- C26 (19) | | /--100--+ | | | \-------- C30 (24) | | | | /-------67------+ |---------------- C37 (31) | | | | | | | |---------------- C41 (36) | | |--98--+ | | | |---------------- C43 (38) | | | | | | | |---------------- C53 (49) | | | | | | | \---------------- C55 (51) | | | | | |----------------------- C45 (40) | | | | | |----------------------- C48 (43) | | | | | \----------------------- C51 (47) | | | | /------------------------------- C13 (5) | | | | | | /-------- C15 (7) | | |----------95----------+ | | | \-------- C54 (50) | /--100--+ | | | | | /-------- C16 (8) | | | |----------90----------+ | | | | \-------- C42 (37) | | | | | | | | /----------------------- C20 (13) | | | | | | | | | |----------------------- C33 (27) | | | | | | | | | | /---------------- C35 (29) | | | | | | | | | | |--99--+ /-------- C49 (44) + | | | | \---95--+ | | | |---81--+ \-------- C50 (46) | | | | | | | | | | /-------- C40 (35) | | | | | | | | | | |------95------+-------- C56 (52) | | | | | | | | | | | \-------- C58 (54) | | \---97--+ | | | | \----------------------- C47 (42) | | | | | |------------------------------- C22 (15) | | | | /--99--+ | /-------- C28 (21) | | | |----------87----------+ | | | | \-------- C31 (25) | | | | | | | | /-------- C29 (22) | | | | | | | | | |-------- C32 (26) | | | |----------82----------+ | | | | |-------- C34 (28) | | | | | | | | | \-------- C36 (30) | | | | | | | |------------------------------- C39 (33) | | | | | | | |------------------------------- C44 (39) | | | | | | | |------------------------------- C52 (48) | | | | | | | |------------------------------- C57 (53) | | | | | | | \------------------------------- C9 (58) | | | | | | /-------- C21 (14) | | | /---97--+ | /---92--+ | | \-------- C4 (34) | | | \--------------75--------------+ | | | \---------------- C8 (57) | | | | | | /--------------------------------------- C17 (9) | | | | | | | | /-------- C19 (11) | | | | /---97--+ | | | | | \-------- C38 (32) | | | | /--100-+ | | |------82------+ | | /-------- C23 (16) | | | | | \--100--+ | | | | /---82--+ \-------- C24 (17) \---55--+ | | | | | | | | | /-------- C3 (23) | | \---75--+ \------61------+ | | | \-------- C7 (56) | | | | | \------------------------------- C2 (12) | | | | /-------- C25 (18) | |---------------------100---------------------+ | | \-------- C27 (20) | | | \------------------------------------------------------ C5 (45) | \-------------------------------------------------------------- C6 (55) Phylogram (based on average branch lengths): /-- C1 (1) | |-- C11 (3) | | /-- C10 (2) | | | | /---- C12 (4) | |--+ | | \-- C46 (41) | | | |-- C14 (6) | | | |-- C18 (10) | | | | /- C26 (19) | | /----+ | | | \- C30 (24) | | | | /--+ |- C37 (31) | | | | | | | |- C41 (36) | | |---+ | | | |- C43 (38) | | | | | | | |- C53 (49) | | | | | | | \- C55 (51) | | | | | |-- C45 (40) | | | | | |-- C48 (43) | | | | | \-- C51 (47) | | | | /-- C13 (5) | | | | | | /-- C15 (7) | | |--+ | | | \-- C54 (50) | /------+ | | | | | /-- C16 (8) | | | |--+ | | | | \-- C42 (37) | | | | | | | | /-- C20 (13) | | | | | | | | | |-- C33 (27) | | | | | | | | | | /--- C35 (29) | | | | | | | | | | |---+ /- C49 (44) + | | | | \--+ | | | |--+ \- C50 (46) | | | | | | | | | | /------- C40 (35) | | | | | | | | | | |---+--- C56 (52) | | | | | | | | | | | \- C58 (54) | | \---+ | | | | \-- C47 (42) | | | | | |- C22 (15) | | | | /----+ | /-- C28 (21) | | | |--+ | | | | \-- C31 (25) | | | | | | | | /-- C29 (22) | | | | | | | | | |-- C32 (26) | | | |--+ | | | | |---- C34 (28) | | | | | | | | | \-- C36 (30) | | | | | | | |--- C39 (33) | | | | | | | |- C44 (39) | | | | | | | |- C52 (48) | | | | | | | |- C57 (53) | | | | | | | \- C9 (58) | | | | | | /------ C21 (14) | | | /----+ | /------+ | | \----- C4 (34) | | | \---+ | | | \---- C8 (57) | | | | | | /---------- C17 (9) | | | | | | | | /-- C19 (11) | | | | /------+ | | | | | \----- C38 (32) | | | | /--------------------+ | | |--+ | | /- C23 (16) | | | | | \-------------------------+ | | | | /---+ \- C24 (17) \---+ | | | | | | | | | /----------------- C3 (23) | | \---+ \--+ | | | \-- C7 (56) | | | | | \--- C2 (12) | | | | /-- C25 (18) | |-----------+ | | \- C27 (20) | | | \------ C5 (45) | \-------- C6 (55) |----------------| 0.005 expected changes per site Calculating tree probabilities... Credible sets of trees (3002 trees sampled): 50 % credible set contains 1501 trees 90 % credible set contains 2702 trees 95 % credible set contains 2852 trees 99 % credible set contains 2972 trees Exiting mrbayes block Reached end of file Tasks completed, exiting program because mode is noninteractive To return control to the command line after completion of file processing, set mode to interactive with 'mb -i <filename>' (i is for interactive) or use 'set mode=interactive' Running FUBAR... [2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\ ***************** TYPES OF STANDARD ANALYSES ***************** (1) Selection Analyses (2) Evolutionary Hypothesis Testing (3) Relative evolutionary rate inference (4) Coevolutionary analysis (5) Basic Analyses (6) Codon Selection Analyses (7) Compartmentalization (8) Data File Tools (9) Miscellaneous (10) Model Comparison (11) Kernel Analysis Tools (12) Molecular Clock (13) Phylogeny Reconstruction (14) Positive Selection (15) Recombination (16) Selection/Recombination (17) Relative Rate (18) Relative Ratio (19) Substitution Rates Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' ***************** (1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution). (2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood). (3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting). (4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection). (5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification). (6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood). (7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation). Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types): Analysis Description -------------------- Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a coding sequence alignment to determine whether some sites have been subject to pervasive purifying or diversifying selection. v2.1 introduces two more methods for estimating the posterior distribution of grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation Bayes approximation (fastest). Please note that a FUBAR analysis generates a cache and a results JSON file in the same directory as directory as the original alignment. HyPhy needs to have write privileges to this directory. For example if the original file is in /home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there will also exist FUBAR-generated files /home/sergei/FUBAR/data/pol.nex.FUBAR.json, /home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide checkpointing so that a partially completed analysis can be restarted. - __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree (one per partition) - __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring selection (2013), Mol Biol Evol. 30(5):1196-205 - __Written by__: Sergei L Kosakovsky Pond - __Contact Information__: spond@temple.edu - __Analysis Version__: 2.1 ####Choose Genetic Code 1. [**Universal**] Universal code. (Genebank transl_table=1). 2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2). 3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3). 4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4). 5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5). 6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6). 7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9). 8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10). 9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12). 10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13). 11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14). 12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15). 13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16). 14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21). 15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22). 16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23). 17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24). 18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25). 19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26). >Please choose an option (or press q to cancel selection): >Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`) >A tree was found in the data file: `(C1,C11,(((((C10,(C12,C46),C14,C18,((C26,C30),C37,C41,C43,C53,C55),C45,C48,C51),(C13,(C15,C54),(C16,C42),(C20,C33,(C35,(C49,C50)),(C40,C56,C58),C47),C22,(C28,C31),(C29,C32,C34,C36),C39,C44,C52,C57,C9)),((C21,C4),C8)),(C17,((((C19,C38),(C23,C24)),(C3,C7)),C2)),(C25,C27),C5),C6))` >Would you like to use it (y/n)? >Loaded a multiple sequence alignment with **58** sequences, **342** codons, and **1** partitions from `/data//pss_subsets/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result/original_alignment/fubar/results/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1.fna` > FUBAR will write cache and result files to _/data//pss_subsets/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result/original_alignment/fubar/results/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result/original_alignment/fubar/results/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1.fna.FUBAR.json_, respectively > Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer): ####Posterior estimation method 1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation) 2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed) 3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default) >Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5): ### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model * Log(L) = -2100.91, AIC-c = 4388.12 (93 estimated parameters) * Tree length (expected substitutions/site) for partition 1 : 0.094 ### Computing the phylogenetic likelihood function on the grid * Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid * Best scaling achieved for * synonymous rate = 2.815 * non-synonymous rate = 0.286 * Computing conditional site likelihoods on a 20 x 20 rate grid ### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights * Using the following settings * Dirichlet alpha : 0.5 ### Tabulating site-level results | Codon | Partition | alpha | beta |Posterior prob for positive selection| |:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:| | 24 | 1 | 0.790 | 7.970 | Pos. posterior = 0.9002 | ---- ## FUBAR inferred 1 sites subject to diversifying positive selection at posterior probability >= 0.9 Of these, 0.10 are expected to be false positives (95% confidence interval of 0-1 )
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.13 sec, SCORE=1000, Nseq=58, Len=342 CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPAENHGYWL CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CH_SXD1_2015_N_ALD83760_1_2015_03_20_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL HKU15_155_N_AFD29198_1_2010_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPAENHGYWL CH_Sichuan_S27_2012_N_AKQ63087_1_2012_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFHVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL IL2768_N_AIA60977_1_2014_02_12_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU150 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU151 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU152 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU153 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU154 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU155 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU156 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU157 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU158 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU159 MAAPVVPTTDASWFQVLKAQNKKSTHPQFRGNGVPLNSAIKPAENHGYWL CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU150 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU151 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU152 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU153 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPAENHGYWL CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU154 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPAENHGYWL CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU155 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU156 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKTVENHGYWL CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU157 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU158 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU159 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL 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CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU150 RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU151 RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU152 RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU153 RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154 RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRITWVKG CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU155 RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU156 RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU157 RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU158 RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG ********** ************************ ********:***** CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU15 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU15 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU15 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU15 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU15 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CH_SXD1_2015_N_ALD83760_1_2015_03_20_China_Swine_Porcine_coronavirus_HKU15 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ HKU15_155_N_AFD29198_1_2010_China_Swine_Porcine_coronavirus_HKU15 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CH_Sichuan_S27_2012_N_AKQ63087_1_2012_China_Swine_Porcine_coronavirus_HKU15 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ IL2768_N_AIA60977_1_2014_02_12_USA_Swine_Porcine_coronavirus_HKU15 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU150 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU151 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ 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CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU153 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU154 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU155 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU156 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU157 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU158 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU159 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ 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CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU155 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU156 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU157 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU158 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU159 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU150 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU151 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU152 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU153 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU154 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU155 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU156 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU157 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU158 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU159 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU150 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU151 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU152 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU153 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU155 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU156 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU157 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU158 SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ************************************************** CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU15 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU15 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU15 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU15 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU15 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CH_SXD1_2015_N_ALD83760_1_2015_03_20_China_Swine_Porcine_coronavirus_HKU15 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI HKU15_155_N_AFD29198_1_2010_China_Swine_Porcine_coronavirus_HKU15 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CH_Sichuan_S27_2012_N_AKQ63087_1_2012_China_Swine_Porcine_coronavirus_HKU15 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI IL2768_N_AIA60977_1_2014_02_12_USA_Swine_Porcine_coronavirus_HKU15 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU150 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU151 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU152 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU153 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU154 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU155 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU156 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU157 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU158 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU159 ERGSGPRSQSVNPRGTCNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU150 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU151 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU152 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU153 ERGSGPRSQSVNPRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU154 ERGSGPRSQSVNPRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU155 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU156 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU157 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU158 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU159 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI 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CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU155 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU156 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU157 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU158 ERGSGPRSQSVNPRGTCNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU159 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI 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CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU155 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU156 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU157 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU158 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU159 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU150 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU151 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU152 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU153 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU155 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU156 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU157 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU158 ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI ************.*** ********************************* CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU15 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU15 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU15 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU15 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU15 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CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU155 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU156 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU157 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU158 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU159 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU150 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU151 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU152 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU153 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU154 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU155 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU156 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU157 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU158 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU159 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU150 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU151 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU152 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU153 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU155 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU156 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU157 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU158 SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES ******* ****************************************** CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU15 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU15 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU15 NFQAGAITLTFSYSMTVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU15 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU15 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYETPTKPTKDKK CH_SXD1_2015_N_ALD83760_1_2015_03_20_China_Swine_Porcine_coronavirus_HKU15 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK HKU15_155_N_AFD29198_1_2010_China_Swine_Porcine_coronavirus_HKU15 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CH_Sichuan_S27_2012_N_AKQ63087_1_2012_China_Swine_Porcine_coronavirus_HKU15 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK IL2768_N_AIA60977_1_2014_02_12_USA_Swine_Porcine_coronavirus_HKU15 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU150 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU151 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU152 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU153 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU154 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU155 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU156 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU157 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU158 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU159 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU150 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU151 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU152 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU153 NFQAGAITLTFSYSMTVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU154 NFQAGAITLTFSYSMTVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU155 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKLTKDKK CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU156 NFQVGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU157 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKLTKDKK CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU158 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU159 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU150 NFQVGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU151 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU152 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU153 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU154 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU155 NFQAGAITLTFSYSITVKEGSPDYDRLKDALNTVVNQTYEPPTKPTKDKK CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU156 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU157 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU158 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU159 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU150 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU151 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU152 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU153 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU154 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU155 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU156 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU157 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU158 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU159 NFQAGAITLTFSYSITVKEGSPDYDRLKDALNTVVNQTYEPPTKPTKDKK CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU150 NFQAGAITLTFSYSITVKEGSPDYDRLKDALNTVVNQTYEPPTKPTKDKK CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU151 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU152 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU153 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU155 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU156 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU157 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU158 NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK ***.**********:*********:***************.*** ***** CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU15 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU15 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU15 PGKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU15 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU15 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CH_SXD1_2015_N_ALD83760_1_2015_03_20_China_Swine_Porcine_coronavirus_HKU15 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA HKU15_155_N_AFD29198_1_2010_China_Swine_Porcine_coronavirus_HKU15 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CH_Sichuan_S27_2012_N_AKQ63087_1_2012_China_Swine_Porcine_coronavirus_HKU15 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA IL2768_N_AIA60977_1_2014_02_12_USA_Swine_Porcine_coronavirus_HKU15 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU150 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU151 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU152 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU153 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU154 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU155 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU156 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU157 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU158 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HB_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU159 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU150 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU151 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU152 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU153 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU154 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU155 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU156 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU157 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU158 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU159 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU150 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU151 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU152 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU153 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU154 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU155 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU156 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU157 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU158 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_AH_2004_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU159 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU150 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU151 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU152 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU153 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU154 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU155 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU156 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU157 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU158 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_JS_2014_N_AKCHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU159 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU150 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU151 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU152 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU153 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU154 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU155 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU156 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU157 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU158 PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA *.****************************************
>CHN_HB_2014_N_AKC54439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU15 ATGGCCGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGCACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTTCCAACCGGAGATGGCCCAGCCCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCCGCTGCGGTACGTCGTAAGACCCAACATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAACACGGTCGTTAACCAGACCTATGAGCCACCCACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAGCCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCCGCTGCGGTACGTCGTAAGACCCAACATCAAGCTCCCAAGCGGACTTTACCTAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAACACGGTCGTTAACCAGACCTATGAGCCACCCACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >CHN_AH_2004_N_AKC54432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU15 ATGGCCGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGCTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGGCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAGCCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCTGCTGCGGTACGTCGTAAGACCCAACATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGTTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATCACCCTGACCTTCTCTTACTCAATGACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAACACGGTCGTTAATCAGACCTATGAGCCACCCACCAAACCAACTAAGGACAAGAAGCCTGGCAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >CHN_JS_2014_N_AKC54446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU15 ATGGCCGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAAACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGCACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCAGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCCACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGCACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCCGCTGCGGTACGTCGTAAGACCCAACATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCAGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGACACCCACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >CH_SXD1_2015_N_ALD83760_1_2015_03_20_China_Swine_Porcine_coronavirus_HKU15 ATGGCCGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGCACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTTCCAACCGGAGATGGCCCAGCCCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCCGCTGCGGTACGTCGTAAGACCCAACATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTTTCGCACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCAGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCCACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >HKU15_155_N_AFD29198_1_2010_China_Swine_Porcine_coronavirus_HKU15 ATGGCCGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGCTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAGCCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCCGCTGCGGTACGTCGTAAGACCCAACATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAACACGGTCGTTAACCAGACCTATGAGCCACCCACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >CH_Sichuan_S27_2012_N_AKQ63087_1_2012_China_Swine_Porcine_coronavirus_HKU15 ATGGCCGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCACGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGCACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCCACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >IL2768_N_AIA60977_1_2014_02_12_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >IN2847_N_AHN16231_1_2014_02_13_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >HKU15_44_N_YP_005352835_1_2009_China_Swine_Porcine_coronavirus_HKU15 ATGGCCGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTTCCAACCGGAGATGGCCCAGCCCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCCGCTGCGGTACGTCGTAAGACCCAACATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAACACGGTCGTTAACCAGACCTATGAGCCACCCACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >KNU14_04_N_AIT11904_1_2014_04_South_Korea_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGCACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAATCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >KY4813_N_AIA60991_1_2014_03_07_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >MI6148_N_AIA99522_1_2014_03_18_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >NE3579_N_AIA61005_1_2014_02_21_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTATTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >Michigan_8977_2014_N_AIP90490_1_2014_03_17_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTTGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAATAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGACACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAGCCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCCGCTGCGGTACGTCGTAAGACCCAACATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGCACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAGATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCCACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >OH11846_NA_ALJ32189_1_2014_05_07_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >P1_16_BTL_0115_PDCoV_2016_Lao_NA_AOM53031_1_2016_01_20_Laos_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGTCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGCTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCTGCAACCACTCGTGTTACTTGGGTTAAAGGTTCGGGAGCTGACACTTCTATTAAGCCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACTGGAGATGGTCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACCCCAGAGGCACATGCAATCAGCCCAGGAAACGCGACCAATCTGCACCTGCTGCGGTACGTCGTAAAACCCAACATCAAGCTCCTAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGCACTGGCGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAACACGGTCGTTAACCAGACCTATGAGCCACCCACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >OH1987_N_AHN16224_1_2014_01_31_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGTTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_CHJXNI2_2015_N_ALA13749_1_2015_03_China_Swine_Porcine_coronavirus_HKU15 ATGGCCGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGCACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGTAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGCACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCAGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCCACTAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PA3148_N_AIA60998_1_2014_02_18_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_Swine_Thailand_S5015L_2015_N_AMN91674_1_2015_06_30_Thailand_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTTCCTACTACTGACGCGTCGTGGTTTCAGGTGCTCAAAGCTCAAAATAAAAAGGCTACTCACCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGCTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGCACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCTGCAACCACTCGTGTTACTTGGGTTAAAGGTTCGGGAGCTGACACTTCTATTAAGCCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACTGGAGATGGTCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACCCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCTGCTGCGGTACGTCGTAAAACCCAACATCAAGCTCCTAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGCGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTCTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTGACCTTCTCTTACTCAATGACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAACACGGTCGTTAACCAGACCTATGAGCCACCCACTAAACCAACTAAGGACAAGAAGCCTGATAAACAAGACCAGTCTGCTAAACCTAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGACTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_Swine_Thailand_S5011_2015_N_AMN91625_1_2015_06_10_Thailand_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTTCCTACTACTGACGCGTCGTGGTTTCAGGTGCTCAAAGCTCAAAATAAAAAGGCTACTCACCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGCTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGCACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCTGCAACCACTCGTGTTACTTGGGTTAAAGGTTCGGGAGCTGACACTTCTATTAAGCCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACTGGAGATGGTCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACCCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCTGCTGCGGTACGTCGTAAAACCCAACATCAAGCTCCTAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGCGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTCTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTGACCTTCTCTTACTCAATGACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAACACGGTCGTTAACCAGACCTATGAGCCACCCACTAAACCAACTAAGGACAAGAAGCCTGATAAACAAGACCAGTCTGCTAAACCTAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGACTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_Swine_Vietnam_Binh21_2015_N_APZ76702_1_2015_12_08_Viet_Nam_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTTCGTTACACCAGACAAAAGCCGGGCGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCCCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCCGCTGCGGTACGTCGTAAGACCCAACATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGCACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCCACCAAACTAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_USA_Illinois121_2014_N_AHL45011_1_2014_01_04_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCTCTTAACTCCGCCATCAAAACCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGTGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_Swine_Vietnam_HaNoi6_2015_N_APZ76694_1_2015_10_10_Viet_Nam_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTTCGTTACACCAGACAAAAGCCGGGCGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCCCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCCGCTGCGGTACGTCGTAAGACCCAACATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGCACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCCACCAAACTAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_USA_Illinois133_2014_N_AIB07789_1_2014_01_08_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCTCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_USA_Minnesota140_2015_N_ANI85836_1_2015_12_18_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCTTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_USA_Illinois136_2014_N_AIB07804_1_2014_01_11_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCTCTTAACTCCGCCATCAAAACCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGTGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_USA_Illinois134_2014_N_AIB07797_1_2014_01_08_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCTCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_USA_Iowa136_2015_N_ANI85829_1_2015_10_15_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCTTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_USA_Ohio137_2014_N_AIB07811_1_2014_01_26_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGTTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_USA_Nebraska137_2015_N_ANI85843_1_2015_11_27_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTTCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCTTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >SD3424_N_AIA60984_1_2014_02_20_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGTTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTCTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGACAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >PDCoV_USA_Nebraska145_2015_N_ANI85850_1_2015_12_21_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCTTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Arkansas61_2015_NA_AML40608_1_2015_03_24_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCTCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >TT_1115_NA_AMW88201_1_2015_11_Thailand_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGTCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGCTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGCACTCCGATTCCTCCATCCTATGCCTTTTATTACACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCTGCAACCACTCGTGTTACTTGGGTTAAAGGTTCGGGAGCTGACACTTCTATTAAGCCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACTGGAGATGGTCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACCCCAGAGGCACATGCAATCAGCCCAGGAAACGCGACCAATCTGCACCTGCTGCGGTACGTCGTAAAACCCAACATCAAGCTCCTAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGCACTGGCGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCTTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAACACGGTCGTTAACCAGACCTATGAGCCACCCACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_IA_2014_8734_N_AHM88404_1_2014_02_20_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAGGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >SdCV_USA_OhioCVM1_2014_N_AIH06861_1_2014_03_01_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGTCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGTTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCCCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCCGCTGCGGTACGTCGTAAGACCCAACATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Illinois272_2014_NA_AML40843_1_2014_02_23_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCTCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_IL_2014_026PDV_P11_N_AKA97942_1_NA_USA_Unknown_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTTGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Illinois273_2014_NA_AML40850_1_2014_02_23_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCTCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Illinois449_2014_NA_AML40815_1_2014_04_21_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Michigan447_2014_NA_AML40794_1_2014_04_02_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Iowa459_2014_NA_AML40906_1_2014_06_05_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAATCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Indiana453_2014_NA_AML40808_1_2014_05_13_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGTTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Michigan448_2014_NA_AML40801_1_2014_04_02_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Minnesota442_2014_NA_AML40780_1_2014_03_06_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGTTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGTAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGACAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Minnesota214_2014_NA_AML40787_1_2014_03_14_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGTTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGTAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGACAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Minnesota159_2014_NA_AML40864_1_2014_02_11_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Minnesota_2013_NA_AML40822_1_2013_10_14_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Minnesota455_2014_NA_AML40836_1_2014_05_21_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCTCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Nebraska209_2014_NA_AML40871_1_2014_02_05_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTATTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Minnesota454_2014_NA_AML40829_1_2014_05_21_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCTCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTATTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCGATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Ohio445_2014_NA_AML40892_1_2014_03_27_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGTCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGTTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTCTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_NorthCarolina452_2014_NA_AML40857_1_2014_05_06_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGGCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGCTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG >USA_Ohio444_2014_NA_AML40885_1_2014_03_26_USA_Swine_Porcine_coronavirus_HKU15 ATGGCTGCACCAGTAGTCCCTACTACTGACGCGTCTTGGTTTCAGGTGCTCAAAGCTCAAAACAAAAAGTCTACTCATCCTCAGTTTCGTGGCAATGGAGTTCCGCTTAACTCCGCCATCAAACCCGTTGAAAACCATGGCTACTGGCTGCGTTACACCAGACAAAAGCCAGGTGGTACTCCCATTCCTCCATCCTATGCCTTTTATTATACTGGCACAGGTCCCAGAGGAAATCTTAAGTATGGTGAACTCCCTCCTAATGATACCCCAGCAACCACTCGTGTTACTTGGGTTAAGGGTTCGGGAGCTGACACTTCTATTAAACCTCATGTTGCCAAACGCAACCCCAACAATCCTAAACATCAGCTGTTACCTCTCCGATTCCCAACCGGAGATGGCCCAGCTCAAGGTTTCAGAGTTGACCCCTTCAACGCTAGAGGAAGACCTCAGGAGCGTGGAAGTGGCCCAAGATCTCAATCTGTTAACTCCAGAGGCACAGGCAATCAGCCCAGGAAACGCGACCAATCTGCACCAGCTGCGGTACGTCGTAAGACCCAGCATCAAGCTCCCAAGCGGACTTTACCCAAGGGTAAAACCATTTCTCAGGTATTTGGCAACCGGTCTCGTACTGGTGCCAATGTCGGCTCTGCAGACACTGAGAAGACGGGTATGGCTGATCCTCGCATCATGGCTCTAGCCAGACATGTGCCTGGTGTTCAGGAAATGCTTTTCGCTGGCCACCTTGAGAGCAACTTTCAGGCGGGGGCAATTACCCTTACCTTCTCCTACTCAATCACAGTCAAGGAGGGTTCTCCTGACTATGAGAGACTTAAGGATGCGCTCAATACGGTCGTTAACCAGACCTATGAGCCACCTACCAAACCAACTAAGGACAAGAAGCCTGACAAACAAGACCAGTCTGCTAAACCCAAACAGCAGAAGAAACCTAAAAAGGTAACTCTGCCAGCAGACAAACAGGATTGGGAGTGGGATGATGCTTTTGAGATAAAGCAGGAATCAGCAGCG
>CHN_HB_2014_N_AKC54439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >CHN_AH_2004_N_AKC54432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPAENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSMTVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PGKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >CHN_JS_2014_N_AKC54446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYETPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >CH_SXD1_2015_N_ALD83760_1_2015_03_20_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRFRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >HKU15_155_N_AFD29198_1_2010_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPAENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >CH_Sichuan_S27_2012_N_AKQ63087_1_2012_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFHVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >IL2768_N_AIA60977_1_2014_02_12_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >IN2847_N_AHN16231_1_2014_02_13_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >HKU15_44_N_YP_005352835_1_2009_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >KNU14_04_N_AIT11904_1_2014_04_South_Korea_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >KY4813_N_AIA60991_1_2014_03_07_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >MI6148_N_AIA99522_1_2014_03_18_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >NE3579_N_AIA61005_1_2014_02_21_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRITWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >Michigan_8977_2014_N_AIP90490_1_2014_03_17_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >OH11846_NA_ALJ32189_1_2014_05_07_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >P1_16_BTL_0115_PDCoV_2016_Lao_NA_AOM53031_1_2016_01_20_Laos_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKSTHPQFRGNGVPLNSAIKPAENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNPRGTCNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >OH1987_N_AHN16224_1_2014_01_31_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_CHJXNI2_2015_N_ALA13749_1_2015_03_China_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PA3148_N_AIA60998_1_2014_02_18_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_Swine_Thailand_S5015L_2015_N_AMN91674_1_2015_06_30_Thailand_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPAENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNPRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSMTVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_Swine_Thailand_S5011_2015_N_AMN91625_1_2015_06_10_Thailand_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPAENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNPRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSMTVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_Swine_Vietnam_Binh21_2015_N_APZ76702_1_2015_12_08_Viet_Nam_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKLTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_USA_Illinois121_2014_N_AHL45011_1_2014_01_04_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKTVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQVGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_Swine_Vietnam_HaNoi6_2015_N_APZ76694_1_2015_10_10_Viet_Nam_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKLTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_USA_Illinois133_2014_N_AIB07789_1_2014_01_08_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTLIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_USA_Minnesota140_2015_N_ANI85836_1_2015_12_18_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPLNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_USA_Illinois136_2014_N_AIB07804_1_2014_01_11_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKTVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQVGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_USA_Illinois134_2014_N_AIB07797_1_2014_01_08_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTLIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_USA_Iowa136_2015_N_ANI85829_1_2015_10_15_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPLNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_USA_Ohio137_2014_N_AIB07811_1_2014_01_26_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_USA_Nebraska137_2015_N_ANI85843_1_2015_11_27_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPLNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >SD3424_N_AIA60984_1_2014_02_20_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYDRLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >PDCoV_USA_Nebraska145_2015_N_ANI85850_1_2015_12_21_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPLNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Arkansas61_2015_NA_AML40608_1_2015_03_24_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >TT_1115_NA_AMW88201_1_2015_11_Thailand_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKSTHPQFRGNGVPLNSAIKPAENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNPRGTCNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_IA_2014_8734_N_AHM88404_1_2014_02_20_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >SdCV_USA_OhioCVM1_2014_N_AIH06861_1_2014_03_01_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKSTHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Illinois272_2014_NA_AML40843_1_2014_02_23_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_IL_2014_026PDV_P11_N_AKA97942_1_NA_USA_Unknown_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Illinois273_2014_NA_AML40850_1_2014_02_23_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Illinois449_2014_NA_AML40815_1_2014_04_21_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Michigan447_2014_NA_AML40794_1_2014_04_02_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Iowa459_2014_NA_AML40906_1_2014_06_05_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Indiana453_2014_NA_AML40808_1_2014_05_13_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Michigan448_2014_NA_AML40801_1_2014_04_02_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Minnesota442_2014_NA_AML40780_1_2014_03_06_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYDRLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Minnesota214_2014_NA_AML40787_1_2014_03_14_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYDRLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Minnesota159_2014_NA_AML40864_1_2014_02_11_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Minnesota_2013_NA_AML40822_1_2013_10_14_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Minnesota455_2014_NA_AML40836_1_2014_05_21_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Nebraska209_2014_NA_AML40871_1_2014_02_05_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRITWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Minnesota454_2014_NA_AML40829_1_2014_05_21_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Ohio445_2014_NA_AML40892_1_2014_03_27_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKSTHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_NorthCarolina452_2014_NA_AML40857_1_2014_05_06_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKATHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA >USA_Ohio444_2014_NA_AML40885_1_2014_03_26_USA_Swine_Porcine_coronavirus_HKU15 MAAPVVPTTDASWFQVLKAQNKKSTHPQFRGNGVPLNSAIKPVENHGYWL RYTRQKPGGTPIPPSYAFYYTGTGPRGNLKYGELPPNDTPATTRVTWVKG SGADTSIKPHVAKRNPNNPKHQLLPLRFPTGDGPAQGFRVDPFNARGRPQ ERGSGPRSQSVNSRGTGNQPRKRDQSAPAAVRRKTQHQAPKRTLPKGKTI SQVFGNRSRTGANVGSADTEKTGMADPRIMALARHVPGVQEMLFAGHLES NFQAGAITLTFSYSITVKEGSPDYERLKDALNTVVNQTYEPPTKPTKDKK PDKQDQSAKPKQQKKPKKVTLPADKQDWEWDDAFEIKQESAA
Reading sequence file /data//pss_subsets/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result/original_alignment/fubar/fasta/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1 Found 58 sequences of length 1026 Alignment looks like a valid DNA alignment. Estimated diversity is (pairwise deletion - ignoring missing/ambig): 0.8% Found 52 informative sites. Writing alignment of informative sites to: Phi.inf.sites Writing list of informative sites to: Phi.inf.list Calculating all pairwise incompatibilities... Done: 0.0%100.0% Using a window size of 80 with k as 4 Calculating analytical mean and variance Doing permutation test for PHI Doing permutation test for NSS Doing Permutation test for MAXCHI Writing alignment of polymorphic unambig sites to: Phi.poly.sites Window size is 42 polymorphic sites **p-Value(s)** ---------- NSS: 3.52e-01 (1000 permutations) Max Chi^2: 7.00e-03 (1000 permutations) PHI (Permutation): 0.00e+00 (1000 permutations) PHI (Normal): 2.22e-04
#NEXUS [ID: 9106610585] begin taxa; dimensions ntax=58; taxlabels CHN_HB_2014_N_AKC54439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU15 IN2847_N_AHN16231_1_2014_02_13_USA_Swine_Porcine_coronavirus_HKU15 HKU15_44_N_YP_005352835_1_2009_China_Swine_Porcine_coronavirus_HKU15 KNU14_04_N_AIT11904_1_2014_04_South_Korea_Swine_Porcine_coronavirus_HKU15 KY4813_N_AIA60991_1_2014_03_07_USA_Swine_Porcine_coronavirus_HKU15 MI6148_N_AIA99522_1_2014_03_18_USA_Swine_Porcine_coronavirus_HKU15 NE3579_N_AIA61005_1_2014_02_21_USA_Swine_Porcine_coronavirus_HKU15 Michigan_8977_2014_N_AIP90490_1_2014_03_17_USA_Swine_Porcine_coronavirus_HKU15 NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15 OH11846_NA_ALJ32189_1_2014_05_07_USA_Swine_Porcine_coronavirus_HKU15 P1_16_BTL_0115_PDCoV_2016_Lao_NA_AOM53031_1_2016_01_20_Laos_Swine_Porcine_coronavirus_HKU15 CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU15 OH1987_N_AHN16224_1_2014_01_31_USA_Swine_Porcine_coronavirus_HKU15 PDCoV_CHJXNI2_2015_N_ALA13749_1_2015_03_China_Swine_Porcine_coronavirus_HKU15 PA3148_N_AIA60998_1_2014_02_18_USA_Swine_Porcine_coronavirus_HKU15 PDCoV_Swine_Thailand_S5015L_2015_N_AMN91674_1_2015_06_30_Thailand_Swine_Porcine_coronavirus_HKU15 PDCoV_Swine_Thailand_S5011_2015_N_AMN91625_1_2015_06_10_Thailand_Swine_Porcine_coronavirus_HKU15 PDCoV_Swine_Vietnam_Binh21_2015_N_APZ76702_1_2015_12_08_Viet_Nam_Swine_Porcine_coronavirus_HKU15 PDCoV_USA_Illinois121_2014_N_AHL45011_1_2014_01_04_USA_Swine_Porcine_coronavirus_HKU15 PDCoV_Swine_Vietnam_HaNoi6_2015_N_APZ76694_1_2015_10_10_Viet_Nam_Swine_Porcine_coronavirus_HKU15 PDCoV_USA_Illinois133_2014_N_AIB07789_1_2014_01_08_USA_Swine_Porcine_coronavirus_HKU15 PDCoV_USA_Minnesota140_2015_N_ANI85836_1_2015_12_18_USA_Swine_Porcine_coronavirus_HKU15 CHN_AH_2004_N_AKC54432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU15 PDCoV_USA_Illinois136_2014_N_AIB07804_1_2014_01_11_USA_Swine_Porcine_coronavirus_HKU15 PDCoV_USA_Illinois134_2014_N_AIB07797_1_2014_01_08_USA_Swine_Porcine_coronavirus_HKU15 PDCoV_USA_Iowa136_2015_N_ANI85829_1_2015_10_15_USA_Swine_Porcine_coronavirus_HKU15 PDCoV_USA_Ohio137_2014_N_AIB07811_1_2014_01_26_USA_Swine_Porcine_coronavirus_HKU15 PDCoV_USA_Nebraska137_2015_N_ANI85843_1_2015_11_27_USA_Swine_Porcine_coronavirus_HKU15 SD3424_N_AIA60984_1_2014_02_20_USA_Swine_Porcine_coronavirus_HKU15 PDCoV_USA_Nebraska145_2015_N_ANI85850_1_2015_12_21_USA_Swine_Porcine_coronavirus_HKU15 USA_Arkansas61_2015_NA_AML40608_1_2015_03_24_USA_Swine_Porcine_coronavirus_HKU15 TT_1115_NA_AMW88201_1_2015_11_Thailand_Swine_Porcine_coronavirus_HKU15 USA_IA_2014_8734_N_AHM88404_1_2014_02_20_USA_Swine_Porcine_coronavirus_HKU15 CHN_JS_2014_N_AKC54446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU15 SdCV_USA_OhioCVM1_2014_N_AIH06861_1_2014_03_01_USA_Swine_Porcine_coronavirus_HKU15 USA_Illinois272_2014_NA_AML40843_1_2014_02_23_USA_Swine_Porcine_coronavirus_HKU15 USA_IL_2014_026PDV_P11_N_AKA97942_1_NA_USA_Unknown_Porcine_coronavirus_HKU15 USA_Illinois273_2014_NA_AML40850_1_2014_02_23_USA_Swine_Porcine_coronavirus_HKU15 USA_Illinois449_2014_NA_AML40815_1_2014_04_21_USA_Swine_Porcine_coronavirus_HKU15 USA_Michigan447_2014_NA_AML40794_1_2014_04_02_USA_Swine_Porcine_coronavirus_HKU15 USA_Iowa459_2014_NA_AML40906_1_2014_06_05_USA_Swine_Porcine_coronavirus_HKU15 USA_Indiana453_2014_NA_AML40808_1_2014_05_13_USA_Swine_Porcine_coronavirus_HKU15 USA_Michigan448_2014_NA_AML40801_1_2014_04_02_USA_Swine_Porcine_coronavirus_HKU15 USA_Minnesota442_2014_NA_AML40780_1_2014_03_06_USA_Swine_Porcine_coronavirus_HKU15 CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU15 USA_Minnesota214_2014_NA_AML40787_1_2014_03_14_USA_Swine_Porcine_coronavirus_HKU15 USA_Minnesota159_2014_NA_AML40864_1_2014_02_11_USA_Swine_Porcine_coronavirus_HKU15 USA_Minnesota_2013_NA_AML40822_1_2013_10_14_USA_Swine_Porcine_coronavirus_HKU15 USA_Minnesota455_2014_NA_AML40836_1_2014_05_21_USA_Swine_Porcine_coronavirus_HKU15 USA_Nebraska209_2014_NA_AML40871_1_2014_02_05_USA_Swine_Porcine_coronavirus_HKU15 USA_Minnesota454_2014_NA_AML40829_1_2014_05_21_USA_Swine_Porcine_coronavirus_HKU15 USA_Ohio445_2014_NA_AML40892_1_2014_03_27_USA_Swine_Porcine_coronavirus_HKU15 USA_NorthCarolina452_2014_NA_AML40857_1_2014_05_06_USA_Swine_Porcine_coronavirus_HKU15 USA_Ohio444_2014_NA_AML40885_1_2014_03_26_USA_Swine_Porcine_coronavirus_HKU15 CH_SXD1_2015_N_ALD83760_1_2015_03_20_China_Swine_Porcine_coronavirus_HKU15 HKU15_155_N_AFD29198_1_2010_China_Swine_Porcine_coronavirus_HKU15 CH_Sichuan_S27_2012_N_AKQ63087_1_2012_China_Swine_Porcine_coronavirus_HKU15 IL2768_N_AIA60977_1_2014_02_12_USA_Swine_Porcine_coronavirus_HKU15 ; end; begin trees; translate 1 CHN_HB_2014_N_AKC54439_1_2014_12_26_China_Swine_Porcine_coronavirus_HKU15, 2 IN2847_N_AHN16231_1_2014_02_13_USA_Swine_Porcine_coronavirus_HKU15, 3 HKU15_44_N_YP_005352835_1_2009_China_Swine_Porcine_coronavirus_HKU15, 4 KNU14_04_N_AIT11904_1_2014_04_South_Korea_Swine_Porcine_coronavirus_HKU15, 5 KY4813_N_AIA60991_1_2014_03_07_USA_Swine_Porcine_coronavirus_HKU15, 6 MI6148_N_AIA99522_1_2014_03_18_USA_Swine_Porcine_coronavirus_HKU15, 7 NE3579_N_AIA61005_1_2014_02_21_USA_Swine_Porcine_coronavirus_HKU15, 8 Michigan_8977_2014_N_AIP90490_1_2014_03_17_USA_Swine_Porcine_coronavirus_HKU15, 9 NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15, 10 OH11846_NA_ALJ32189_1_2014_05_07_USA_Swine_Porcine_coronavirus_HKU15, 11 P1_16_BTL_0115_PDCoV_2016_Lao_NA_AOM53031_1_2016_01_20_Laos_Swine_Porcine_coronavirus_HKU15, 12 CHN_HN_2014_N_ALS54090_1_2014_11_24_China_Swine_Porcine_coronavirus_HKU15, 13 OH1987_N_AHN16224_1_2014_01_31_USA_Swine_Porcine_coronavirus_HKU15, 14 PDCoV_CHJXNI2_2015_N_ALA13749_1_2015_03_China_Swine_Porcine_coronavirus_HKU15, 15 PA3148_N_AIA60998_1_2014_02_18_USA_Swine_Porcine_coronavirus_HKU15, 16 PDCoV_Swine_Thailand_S5015L_2015_N_AMN91674_1_2015_06_30_Thailand_Swine_Porcine_coronavirus_HKU15, 17 PDCoV_Swine_Thailand_S5011_2015_N_AMN91625_1_2015_06_10_Thailand_Swine_Porcine_coronavirus_HKU15, 18 PDCoV_Swine_Vietnam_Binh21_2015_N_APZ76702_1_2015_12_08_Viet_Nam_Swine_Porcine_coronavirus_HKU15, 19 PDCoV_USA_Illinois121_2014_N_AHL45011_1_2014_01_04_USA_Swine_Porcine_coronavirus_HKU15, 20 PDCoV_Swine_Vietnam_HaNoi6_2015_N_APZ76694_1_2015_10_10_Viet_Nam_Swine_Porcine_coronavirus_HKU15, 21 PDCoV_USA_Illinois133_2014_N_AIB07789_1_2014_01_08_USA_Swine_Porcine_coronavirus_HKU15, 22 PDCoV_USA_Minnesota140_2015_N_ANI85836_1_2015_12_18_USA_Swine_Porcine_coronavirus_HKU15, 23 CHN_AH_2004_N_AKC54432_1_2004_05_24_China_Swine_Porcine_coronavirus_HKU15, 24 PDCoV_USA_Illinois136_2014_N_AIB07804_1_2014_01_11_USA_Swine_Porcine_coronavirus_HKU15, 25 PDCoV_USA_Illinois134_2014_N_AIB07797_1_2014_01_08_USA_Swine_Porcine_coronavirus_HKU15, 26 PDCoV_USA_Iowa136_2015_N_ANI85829_1_2015_10_15_USA_Swine_Porcine_coronavirus_HKU15, 27 PDCoV_USA_Ohio137_2014_N_AIB07811_1_2014_01_26_USA_Swine_Porcine_coronavirus_HKU15, 28 PDCoV_USA_Nebraska137_2015_N_ANI85843_1_2015_11_27_USA_Swine_Porcine_coronavirus_HKU15, 29 SD3424_N_AIA60984_1_2014_02_20_USA_Swine_Porcine_coronavirus_HKU15, 30 PDCoV_USA_Nebraska145_2015_N_ANI85850_1_2015_12_21_USA_Swine_Porcine_coronavirus_HKU15, 31 USA_Arkansas61_2015_NA_AML40608_1_2015_03_24_USA_Swine_Porcine_coronavirus_HKU15, 32 TT_1115_NA_AMW88201_1_2015_11_Thailand_Swine_Porcine_coronavirus_HKU15, 33 USA_IA_2014_8734_N_AHM88404_1_2014_02_20_USA_Swine_Porcine_coronavirus_HKU15, 34 CHN_JS_2014_N_AKC54446_1_2014_12_20_China_Swine_Porcine_coronavirus_HKU15, 35 SdCV_USA_OhioCVM1_2014_N_AIH06861_1_2014_03_01_USA_Swine_Porcine_coronavirus_HKU15, 36 USA_Illinois272_2014_NA_AML40843_1_2014_02_23_USA_Swine_Porcine_coronavirus_HKU15, 37 USA_IL_2014_026PDV_P11_N_AKA97942_1_NA_USA_Unknown_Porcine_coronavirus_HKU15, 38 USA_Illinois273_2014_NA_AML40850_1_2014_02_23_USA_Swine_Porcine_coronavirus_HKU15, 39 USA_Illinois449_2014_NA_AML40815_1_2014_04_21_USA_Swine_Porcine_coronavirus_HKU15, 40 USA_Michigan447_2014_NA_AML40794_1_2014_04_02_USA_Swine_Porcine_coronavirus_HKU15, 41 USA_Iowa459_2014_NA_AML40906_1_2014_06_05_USA_Swine_Porcine_coronavirus_HKU15, 42 USA_Indiana453_2014_NA_AML40808_1_2014_05_13_USA_Swine_Porcine_coronavirus_HKU15, 43 USA_Michigan448_2014_NA_AML40801_1_2014_04_02_USA_Swine_Porcine_coronavirus_HKU15, 44 USA_Minnesota442_2014_NA_AML40780_1_2014_03_06_USA_Swine_Porcine_coronavirus_HKU15, 45 CHN_Tianjin_2016_N_APG38202_1_2016_China_Swine_Porcine_coronavirus_HKU15, 46 USA_Minnesota214_2014_NA_AML40787_1_2014_03_14_USA_Swine_Porcine_coronavirus_HKU15, 47 USA_Minnesota159_2014_NA_AML40864_1_2014_02_11_USA_Swine_Porcine_coronavirus_HKU15, 48 USA_Minnesota_2013_NA_AML40822_1_2013_10_14_USA_Swine_Porcine_coronavirus_HKU15, 49 USA_Minnesota455_2014_NA_AML40836_1_2014_05_21_USA_Swine_Porcine_coronavirus_HKU15, 50 USA_Nebraska209_2014_NA_AML40871_1_2014_02_05_USA_Swine_Porcine_coronavirus_HKU15, 51 USA_Minnesota454_2014_NA_AML40829_1_2014_05_21_USA_Swine_Porcine_coronavirus_HKU15, 52 USA_Ohio445_2014_NA_AML40892_1_2014_03_27_USA_Swine_Porcine_coronavirus_HKU15, 53 USA_NorthCarolina452_2014_NA_AML40857_1_2014_05_06_USA_Swine_Porcine_coronavirus_HKU15, 54 USA_Ohio444_2014_NA_AML40885_1_2014_03_26_USA_Swine_Porcine_coronavirus_HKU15, 55 CH_SXD1_2015_N_ALD83760_1_2015_03_20_China_Swine_Porcine_coronavirus_HKU15, 56 HKU15_155_N_AFD29198_1_2010_China_Swine_Porcine_coronavirus_HKU15, 57 CH_Sichuan_S27_2012_N_AKQ63087_1_2012_China_Swine_Porcine_coronavirus_HKU15, 58 IL2768_N_AIA60977_1_2014_02_12_USA_Swine_Porcine_coronavirus_HKU15 ; [Note: This tree contains information on the topology, branch lengths (if present), and the probability of the partition indicated by the branch.] tree con_50_majrule = (1:5.182726e-04,3:6.353098e-04,(((((2:4.017639e-04,(4:9.775347e-04,41:4.341561e-04)0.883:9.037614e-04,6:4.072087e-04,10:3.983040e-04,((19:3.798474e-04,24:3.907112e-04)1.000:1.505911e-03,31:4.124040e-04,36:3.986496e-04,38:3.591619e-04,49:3.792492e-04,51:3.734525e-04)0.981:9.710588e-04,40:3.897496e-04,43:3.813004e-04,47:4.189984e-04)0.671:9.451053e-04,(5:4.260037e-04,(7:3.965746e-04,50:4.221499e-04)0.952:9.404441e-04,(8:4.245468e-04,37:3.928882e-04)0.904:9.117937e-04,(13:3.770911e-04,27:3.843365e-04,(29:9.747831e-04,(44:4.100655e-04,46:4.052717e-04)0.950:9.441466e-04)0.987:9.725861e-04,(35:2.005822e-03,52:9.178011e-04,54:3.896705e-04)0.950:9.311356e-04,42:3.928297e-04)0.809:9.471465e-04,15:3.776720e-04,(21:4.101042e-04,25:3.946178e-04)0.874:9.498246e-04,(22:3.904105e-04,26:4.007447e-04,28:9.937599e-04,30:3.855674e-04)0.817:8.932043e-04,33:9.429470e-04,39:3.873692e-04,48:3.944388e-04,53:3.809349e-04,58:4.002593e-04)0.973:1.154126e-03)0.997:1.980718e-03,((14:1.804907e-03,34:1.281980e-03)0.971:1.555281e-03,57:1.345125e-03)0.746:1.028491e-03)0.993:1.563177e-03,(9:2.733606e-03,((((11:5.169414e-04,32:1.301933e-03)0.967:2.040065e-03,(16:3.658577e-04,17:4.116386e-04)1.000:7.367520e-03)1.000:6.152429e-03,(23:4.966961e-03,56:4.797890e-04)0.609:9.896135e-04)0.815:1.144420e-03,12:1.017944e-03)0.751:9.625977e-04)0.822:1.012052e-03,(18:4.111321e-04,20:3.639531e-04)1.000:3.542996e-03,45:1.838215e-03)0.924:1.973109e-03,55:2.433091e-03)0.553:1.125120e-03); [Note: This tree contains information only on the topology and branch lengths (median of the posterior probability density).] tree con_50_majrule = (1:5.182726e-04,3:6.353098e-04,(((((2:4.017639e-04,(4:9.775347e-04,41:4.341561e-04):9.037614e-04,6:4.072087e-04,10:3.983040e-04,((19:3.798474e-04,24:3.907112e-04):1.505911e-03,31:4.124040e-04,36:3.986496e-04,38:3.591619e-04,49:3.792492e-04,51:3.734525e-04):9.710588e-04,40:3.897496e-04,43:3.813004e-04,47:4.189984e-04):9.451053e-04,(5:4.260037e-04,(7:3.965746e-04,50:4.221499e-04):9.404441e-04,(8:4.245468e-04,37:3.928882e-04):9.117937e-04,(13:3.770911e-04,27:3.843365e-04,(29:9.747831e-04,(44:4.100655e-04,46:4.052717e-04):9.441466e-04):9.725861e-04,(35:2.005822e-03,52:9.178011e-04,54:3.896705e-04):9.311356e-04,42:3.928297e-04):9.471465e-04,15:3.776720e-04,(21:4.101042e-04,25:3.946178e-04):9.498246e-04,(22:3.904105e-04,26:4.007447e-04,28:9.937599e-04,30:3.855674e-04):8.932043e-04,33:9.429470e-04,39:3.873692e-04,48:3.944388e-04,53:3.809349e-04,58:4.002593e-04):1.154126e-03):1.980718e-03,((14:1.804907e-03,34:1.281980e-03):1.555281e-03,57:1.345125e-03):1.028491e-03):1.563177e-03,(9:2.733606e-03,((((11:5.169414e-04,32:1.301933e-03):2.040065e-03,(16:3.658577e-04,17:4.116386e-04):7.367520e-03):6.152429e-03,(23:4.966961e-03,56:4.797890e-04):9.896135e-04):1.144420e-03,12:1.017944e-03):9.625977e-04):1.012052e-03,(18:4.111321e-04,20:3.639531e-04):3.542996e-03,45:1.838215e-03):1.973109e-03,55:2.433091e-03):1.125120e-03); end;
Estimated marginal likelihoods for runs sampled in files "/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p": (Use the harmonic mean for Bayes factor comparisons of models) (Values are saved to the file /data/mrbayes_input.nex.lstat) Run Arithmetic mean Harmonic mean -------------------------------------- 1 -1900.35 -1926.59 2 -1897.86 -1925.36 -------------------------------------- TOTAL -1898.47 -1926.15 -------------------------------------- Model parameter summaries over the runs sampled in files "/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p": Summaries are based on a total of 3002 samples from 2 runs. Each run produced 2001 samples of which 1501 samples were included. Parameter summaries saved to file "/data/mrbayes_input.nex.pstat". 95% HPD Interval -------------------- Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+ ------------------------------------------------------------------------------------------------------ TL{all} 0.084306 0.000256 0.055029 0.115905 0.082714 1056.45 1151.05 1.000 r(A<->C){all} 0.049620 0.000514 0.010752 0.091629 0.045951 597.33 729.85 1.002 r(A<->G){all} 0.135237 0.001969 0.061439 0.231267 0.129683 480.54 542.63 1.000 r(A<->T){all} 0.025012 0.000382 0.000006 0.063761 0.020645 465.78 595.44 1.002 r(C<->G){all} 0.046947 0.000596 0.006201 0.094274 0.043176 741.65 746.82 1.000 r(C<->T){all} 0.645530 0.004078 0.523578 0.774151 0.647242 531.82 572.09 1.000 r(G<->T){all} 0.097654 0.001605 0.029480 0.176098 0.091904 390.31 442.48 1.000 pi(A){all} 0.280728 0.000190 0.254682 0.307842 0.280668 1135.16 1140.70 1.000 pi(C){all} 0.276865 0.000186 0.250129 0.302900 0.276790 1065.50 1152.47 1.000 pi(G){all} 0.222465 0.000170 0.199146 0.250210 0.222550 1155.44 1176.51 1.000 pi(T){all} 0.219941 0.000152 0.196327 0.244465 0.219729 1105.34 1120.18 1.000 alpha{1,2} 0.384920 0.232241 0.000233 1.208362 0.240684 991.54 1030.43 1.000 alpha{3} 1.473955 1.118861 0.001804 3.488639 1.201474 948.77 968.71 1.002 pinvar{all} 0.730174 0.008879 0.548103 0.877043 0.748539 586.59 663.84 1.002 ------------------------------------------------------------------------------------------------------ * Convergence diagnostic (ESS = Estimated Sample Size); min and avg values correspond to minimal and average ESS among runs. ESS value below 100 may indicate that the parameter is undersampled. + Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman and Rubin, 1992) should approach 1.0 as runs converge.
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\ ***************** TYPES OF STANDARD ANALYSES ***************** (1) Selection Analyses (2) Evolutionary Hypothesis Testing (3) Relative evolutionary rate inference (4) Coevolutionary analysis (5) Basic Analyses (6) Codon Selection Analyses (7) Compartmentalization (8) Data File Tools (9) Miscellaneous (10) Model Comparison (11) Kernel Analysis Tools (12) Molecular Clock (13) Phylogeny Reconstruction (14) Positive Selection (15) Recombination (16) Selection/Recombination (17) Relative Rate (18) Relative Ratio (19) Substitution Rates Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' ***************** (1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution). (2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood). (3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting). (4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection). (5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification). (6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood). (7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation). Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types): Analysis Description -------------------- Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a coding sequence alignment to determine whether some sites have been subject to pervasive purifying or diversifying selection. v2.1 introduces two more methods for estimating the posterior distribution of grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation Bayes approximation (fastest). Please note that a FUBAR analysis generates a cache and a results JSON file in the same directory as directory as the original alignment. HyPhy needs to have write privileges to this directory. For example if the original file is in /home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there will also exist FUBAR-generated files /home/sergei/FUBAR/data/pol.nex.FUBAR.json, /home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide checkpointing so that a partially completed analysis can be restarted. - __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree (one per partition) - __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring selection (2013), Mol Biol Evol. 30(5):1196-205 - __Written by__: Sergei L Kosakovsky Pond - __Contact Information__: spond@temple.edu - __Analysis Version__: 2.1 ####Choose Genetic Code 1. [**Universal**] Universal code. (Genebank transl_table=1). 2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2). 3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3). 4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4). 5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5). 6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6). 7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9). 8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10). 9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12). 10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13). 11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14). 12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15). 13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16). 14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21). 15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22). 16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23). 17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24). 18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25). 19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26). >Please choose an option (or press q to cancel selection): >Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`) >A tree was found in the data file: `(C1,C11,(((((C10,(C12,C46),C14,C18,((C26,C30),C37,C41,C43,C53,C55),C45,C48,C51),(C13,(C15,C54),(C16,C42),(C20,C33,(C35,(C49,C50)),(C40,C56,C58),C47),C22,(C28,C31),(C29,C32,C34,C36),C39,C44,C52,C57,C9)),((C21,C4),C8)),(C17,((((C19,C38),(C23,C24)),(C3,C7)),C2)),(C25,C27),C5),C6))` >Would you like to use it (y/n)? >Loaded a multiple sequence alignment with **58** sequences, **342** codons, and **1** partitions from `/data//pss_subsets/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result/original_alignment/fubar/results/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1.fna` > FUBAR will write cache and result files to _/data//pss_subsets/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result/original_alignment/fubar/results/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result/original_alignment/fubar/results/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1/NH_N_ANA78468_1_2015_12_30_China_Unknown_Porcine_coronavirus_HKU15.result.1.fna.FUBAR.json_, respectively > Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer): ####Posterior estimation method 1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation) 2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed) 3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default) >Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5): ### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model * Log(L) = -2100.91, AIC-c = 4388.12 (93 estimated parameters) * Tree length (expected substitutions/site) for partition 1 : 0.094 ### Computing the phylogenetic likelihood function on the grid * Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid * Best scaling achieved for * synonymous rate = 2.815 * non-synonymous rate = 0.286 * Computing conditional site likelihoods on a 20 x 20 rate grid ### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights * Using the following settings * Dirichlet alpha : 0.5 ### Tabulating site-level results | Codon | Partition | alpha | beta |Posterior prob for positive selection| |:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:| | 24 | 1 | 0.790 | 7.970 | Pos. posterior = 0.9002 | ---- ## FUBAR inferred 1 sites subject to diversifying positive selection at posterior probability >= 0.9 Of these, 0.10 are expected to be false positives (95% confidence interval of 0-1 )
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500