--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -3869.65 -3904.55
2 -3868.58 -3899.09
--------------------------------------
TOTAL -3868.98 -3903.86
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.386375 0.001207 0.319355 0.454040 0.384673 1463.71 1477.01 1.000
r(A<->C){all} 0.109955 0.000379 0.071825 0.147197 0.109103 766.41 918.47 1.000
r(A<->G){all} 0.201559 0.000648 0.154314 0.253705 0.200145 733.66 822.17 1.000
r(A<->T){all} 0.104238 0.000332 0.069147 0.138403 0.102974 999.87 1003.10 1.000
r(C<->G){all} 0.077197 0.000305 0.045082 0.112202 0.076303 943.82 1031.00 1.000
r(C<->T){all} 0.416027 0.001219 0.347101 0.482212 0.415141 841.48 936.28 1.000
r(G<->T){all} 0.091026 0.000313 0.058024 0.125933 0.090258 991.54 1001.78 1.000
pi(A){all} 0.287452 0.000133 0.265887 0.310046 0.287191 962.91 999.62 1.000
pi(C){all} 0.225132 0.000118 0.204524 0.245924 0.224819 1078.99 1123.62 1.000
pi(G){all} 0.257576 0.000125 0.234792 0.279393 0.257527 961.90 1055.43 1.000
pi(T){all} 0.229840 0.000118 0.208852 0.250381 0.229962 971.64 1000.09 1.000
alpha{1,2} 0.272416 0.006495 0.128714 0.442231 0.262834 743.99 820.19 1.001
alpha{3} 2.765530 1.988988 0.547599 5.645226 2.468158 893.46 984.79 1.000
pinvar{all} 0.553128 0.004358 0.420921 0.664547 0.563265 630.76 632.10 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
-- Starting log on Wed Nov 02 20:11:17 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.09 sec, SCORE=1000, Nseq=28, Len=457
C1 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGQNNGNRGRRNQPK
C2 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C3 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C4 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C5 MSFVPGQENAGSRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C6 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK
C7 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C8 MSFVPGQENAGSRSSFGNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C9 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C10 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C11 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C12 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C13 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C14 MSFVPGQENAGSRSSSGSRSGNGILKKTTWADQTERAGNNGNRGRRNQPK
C15 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C16 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C17 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK
C18 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGQNNGNRGRRNQPK
C19 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK
C20 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C21 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C22 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C23 MSFVPGQENAGSRSSSGSRSGNGILKKTTWADQTERAGNNGNRGRRNQPK
C24 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C25 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRKNQPK
C26 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C27 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C28 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
***********.*** .*:****************. ****:*:**
C1 QTATTQPNTGSVVPHYSWFSGITQFQKGKEFQFAGGQGVPIANGIPSSEQ
C2 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C3 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C4 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C5 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASEQ
C6 QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ
C7 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C8 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFKFADGQGVPIANGIPASEQ
C9 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C10 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C11 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C12 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C13 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C14 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFVQGQGVPIANGIPASEQ
C15 QTATTQLNSGSVVPHYSWFSGITQFQKGKQFQFAEGQGVPIANGIPATEQ
C16 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C17 QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ
C18 QTATTQPNTGSVVPHYSWFSGITQFQKGKEFQFAGGQGVPIANGIPSSEQ
C19 QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ
C20 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C21 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C22 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C23 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFVQGQGVPIANGIPASEQ
C24 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C25 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C26 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C27 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C28 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
****** *:********************:*:*. *******.***:::*
C1 KGYWYRHNRRSFKTPGGQQKQLLPRWYFYYLGTGPHAGASFGDSIEGVFW
C2 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C3 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C4 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C5 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIDGVVW
C6 KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C7 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C8 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIDGVVW
C9 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C10 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C11 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C12 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C13 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C14 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C15 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDNIEGVVW
C16 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C17 KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C18 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASFGDSIEGVFW
C19 KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C20 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C21 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C22 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C23 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C24 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C25 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C26 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C27 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C28 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
***************.**:****************:***.:**.*:**.*
C1 VANSQADTNTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C2 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C3 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C4 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C5 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C6 VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C7 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C8 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C9 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C10 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C11 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C12 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C13 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C14 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C15 VASHQADTKTSADIVERDPSSHEAIPTRFAPGTVIPQGFYVEGSGRSAPA
C16 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C17 VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C18 VANSQADTNTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C19 VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C20 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C21 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C22 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C23 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C24 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C25 VASQQAETRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C26 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C27 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C28 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
**. **:*.* :*:********************:***************
C1 SRSGSRSQSRGPNNRARSSSNQRQAASTVKPDMAEEIAALVLAKLGKDAG
C2 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C3 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C4 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C5 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C6 SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG
C7 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C8 SRSGSRSQSRGPNNRSRSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C9 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C10 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C11 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C12 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C13 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C14 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C15 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C16 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C17 SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG
C18 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C19 SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG
C20 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C21 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C22 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C23 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C24 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C25 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C26 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C27 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C28 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
******.********:********.**:**********************
C1 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C2 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C3 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C4 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C5 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C6 QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C7 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C8 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C9 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C10 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C11 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C12 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C13 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C14 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C15 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C16 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C17 QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C18 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C19 QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C20 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C21 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C22 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C23 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C24 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C25 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C26 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C27 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C28 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
******************.*****************************.*
C1 MLKLGTSDPQFPILAELAPTPGAFFFGSKLELVKKNSGGVDEPTKDVYEL
C2 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C3 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C4 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C5 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADDPTKDVYEL
C6 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
C7 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C8 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
C9 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C10 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C11 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C12 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C13 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C14 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADEPTKDVYEL
C15 MLKLGTNDPQFPILAELVPTPGAFFFGSKLELVKKNSGGADEPTKDVYEL
C16 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C17 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
C18 MLKLGTSDPQFPILAELAPTPGAFFFGSKLELVKKNSGGVDEPTKDVYEL
C19 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
C20 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C21 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C22 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C23 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADEPTKDVYEL
C24 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C25 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C26 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C27 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C28 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
******.**********.** .*****************.* ********
C1 HYSGAVRFDSTLSGFETIMKVLNENLNAYQNQAGGVDVVSPKPQRKRGTK
C2 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C3 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C4 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C5 QYSGAIRFDSTLPGFETIMKVLNENLDAYQDQAGGADVVSPKPQRKRGTK
C6 QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR
C7 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C8 QYSGAVRFDSTLPGFETIMKVLNENLNAYQDQAGGADVVSPKPQRKRGQR
C9 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C10 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C11 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C12 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C13 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C14 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C15 QYSGAVRFDSTLPGFETIMKVLNENLNAYQKESGGVDVVSPKPQRK-GRR
C16 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C17 QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR
C18 HYSGAVRFDSTLSGFETIMKVLNENLNAYQNQAGGVDVVSPKPQRKRGTK
C19 QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR
C20 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C21 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C22 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C23 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C24 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C25 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C26 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C27 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C28 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
:****:******.*********.***:*** : *..*:***** *: * :
C1 QTAQK--EELDSISVAQPKSAVQRNVSRELTPEDRSLLAQILDDGVVPDG
C2 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C3 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C4 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C5 QKALK--GEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C6 QAQEKK-DEVDNVSVAKPKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG
C7 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C8 QVAQKKNDEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C9 QAKEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C10 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C11 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C12 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C13 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C14 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C15 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C16 QALEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C17 QAQEKK-DEVDNVSVAKLKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG
C18 QTAQK--EELDSISVAQPKSAVQRNVSRELTPEDRSLLAQILDDGVVPDG
C19 QAQEKK-DEVDNVSVAKPKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG
C20 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C21 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C22 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C23 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C24 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C25 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C26 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C27 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C28 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
* * *:*.:***: ** *****************************
C1 L-DDSNV
C2 LEDDSNV
C3 LEDDSNV
C4 VEDDSNV
C5 LEDDSNV
C6 LEDDSNV
C7 LEDDSNV
C8 LEDDSNV
C9 LEDDSNV
C10 LEDDSNV
C11 LEDDSNV
C12 LEDDSNV
C13 LEDDSNV
C14 LEDDSNV
C15 LEDDSKV
C16 LEDDSNV
C17 LEDDSNV
C18 L-DDSNV
C19 LEDDSNV
C20 LEDDSNV
C21 LEDDSNV
C22 LEDDSNV
C23 LEDDSNV
C24 LEDDSNV
C25 LEDDSNV
C26 LEDDSNV
C27 LEDDSNV
C28 LEDDSNV
: ***:*
-- Starting log on Wed Nov 02 20:14:14 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.65 sec, SCORE=992, Nseq=28, Len=457
C1 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGQNNGNRGRRNQPK
C2 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C3 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C4 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C5 MSFVPGQENAGSRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C6 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK
C7 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C8 MSFVPGQENAGSRSSFGNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C9 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C10 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C11 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C12 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C13 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C14 MSFVPGQENAGSRSSSGSRSGNGILKKTTWADQTERAGNNGNRGRRNQPK
C15 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C16 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C17 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK
C18 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGQNNGNRGRRNQPK
C19 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK
C20 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C21 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C22 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C23 MSFVPGQENAGSRSSSGSRSGNGILKKTTWADQTERAGNNGNRGRRNQPK
C24 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C25 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRKNQPK
C26 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C27 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C28 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
***********.*** .*:****************. ****:*:**
C1 QTATTQPNTGSVVPHYSWFSGITQFQKGKEFQFAGGQGVPIANGIPSSEQ
C2 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C3 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C4 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C5 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASEQ
C6 QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ
C7 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C8 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFKFADGQGVPIANGIPASEQ
C9 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C10 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C11 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C12 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C13 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C14 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFVQGQGVPIANGIPASEQ
C15 QTATTQLNSGSVVPHYSWFSGITQFQKGKQFQFAEGQGVPIANGIPATEQ
C16 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C17 QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ
C18 QTATTQPNTGSVVPHYSWFSGITQFQKGKEFQFAGGQGVPIANGIPSSEQ
C19 QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ
C20 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C21 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C22 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C23 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFVQGQGVPIANGIPASEQ
C24 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C25 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C26 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C27 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C28 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
****** *:********************:*:*. *******.***:::*
C1 KGYWYRHNRRSFKTPGGQQKQLLPRWYFYYLGTGPHAGASFGDSIEGVFW
C2 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C3 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C4 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C5 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIDGVVW
C6 KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C7 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C8 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIDGVVW
C9 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C10 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C11 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C12 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C13 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C14 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C15 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDNIEGVVW
C16 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C17 KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C18 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASFGDSIEGVFW
C19 KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C20 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C21 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C22 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C23 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C24 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C25 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C26 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C27 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C28 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
***************.**:****************:***.:**.*:**.*
C1 VANSQADTNTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C2 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C3 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C4 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C5 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C6 VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C7 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C8 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C9 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C10 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C11 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C12 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C13 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C14 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C15 VASHQADTKTSADIVERDPSSHEAIPTRFAPGTVIPQGFYVEGSGRSAPA
C16 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C17 VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C18 VANSQADTNTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C19 VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C20 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C21 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C22 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C23 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C24 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C25 VASQQAETRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C26 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C27 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C28 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
**. **:*.* :*:********************:***************
C1 SRSGSRSQSRGPNNRARSSSNQRQAASTVKPDMAEEIAALVLAKLGKDAG
C2 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C3 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C4 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C5 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C6 SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG
C7 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C8 SRSGSRSQSRGPNNRSRSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C9 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C10 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C11 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C12 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C13 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C14 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C15 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C16 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C17 SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG
C18 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C19 SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG
C20 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C21 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C22 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C23 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C24 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C25 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C26 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C27 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C28 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
******.********:********.**:**********************
C1 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C2 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C3 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C4 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C5 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C6 QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C7 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C8 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C9 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C10 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C11 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C12 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C13 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C14 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C15 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C16 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C17 QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C18 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C19 QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C20 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C21 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C22 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C23 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C24 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C25 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C26 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C27 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C28 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
******************.*****************************.*
C1 MLKLGTSDPQFPILAELAPTPGAFFFGSKLELVKKNSGGVDEPTKDVYEL
C2 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C3 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C4 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C5 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADDPTKDVYEL
C6 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
C7 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C8 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
C9 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C10 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C11 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C12 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C13 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C14 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADEPTKDVYEL
C15 MLKLGTNDPQFPILAELVPTPGAFFFGSKLELVKKNSGGADEPTKDVYEL
C16 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C17 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
C18 MLKLGTSDPQFPILAELAPTPGAFFFGSKLELVKKNSGGVDEPTKDVYEL
C19 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
C20 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C21 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C22 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C23 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADEPTKDVYEL
C24 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C25 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C26 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C27 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C28 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
******.**********.** .*****************.* ********
C1 HYSGAVRFDSTLSGFETIMKVLNENLNAYQNQAGGVDVVSPKPQRKRGTK
C2 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C3 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C4 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C5 QYSGAIRFDSTLPGFETIMKVLNENLDAYQDQAGGADVVSPKPQRKRGTK
C6 QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR
C7 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C8 QYSGAVRFDSTLPGFETIMKVLNENLNAYQDQAGGADVVSPKPQRKRGQR
C9 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C10 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C11 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C12 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C13 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C14 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C15 QYSGAVRFDSTLPGFETIMKVLNENLNAYQKESGGVDVVSPKPQRK-GRR
C16 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C17 QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR
C18 HYSGAVRFDSTLSGFETIMKVLNENLNAYQNQAGGVDVVSPKPQRKRGTK
C19 QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR
C20 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C21 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C22 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C23 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C24 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C25 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C26 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C27 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C28 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
:****:******.*********.***:*** : *..*:***** *: * :
C1 QTAQK--EELDSISVAQPKSAVQRNVSRELTPEDRSLLAQILDDGVVPDG
C2 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C3 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C4 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C5 QKALK--GEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C6 QAQEKK-DEVDNVSVAKPKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG
C7 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C8 QVAQKKNDEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C9 QAKEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C10 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C11 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C12 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C13 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C14 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C15 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C16 QALEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C17 QAQEKK-DEVDNVSVAKLKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG
C18 QTAQK--EELDSISVAQPKSAVQRNVSRELTPEDRSLLAQILDDGVVPDG
C19 QAQEKK-DEVDNVSVAKPKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG
C20 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C21 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C22 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C23 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C24 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C25 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C26 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C27 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C28 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
* * *:*.:***: ** *****************************
C1 L-DDSNV
C2 LEDDSNV
C3 LEDDSNV
C4 VEDDSNV
C5 LEDDSNV
C6 LEDDSNV
C7 LEDDSNV
C8 LEDDSNV
C9 LEDDSNV
C10 LEDDSNV
C11 LEDDSNV
C12 LEDDSNV
C13 LEDDSNV
C14 LEDDSNV
C15 LEDDSKV
C16 LEDDSNV
C17 LEDDSNV
C18 L-DDSNV
C19 LEDDSNV
C20 LEDDSNV
C21 LEDDSNV
C22 LEDDSNV
C23 LEDDSNV
C24 LEDDSNV
C25 LEDDSNV
C26 LEDDSNV
C27 LEDDSNV
C28 LEDDSNV
: ***:*
-- Starting log on Wed Nov 02 20:11:17 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.09 sec, SCORE=1000, Nseq=28, Len=457
C1 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGQNNGNRGRRNQPK
C2 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C3 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C4 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C5 MSFVPGQENAGSRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C6 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK
C7 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C8 MSFVPGQENAGSRSSFGNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C9 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C10 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C11 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C12 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C13 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C14 MSFVPGQENAGSRSSSGSRSGNGILKKTTWADQTERAGNNGNRGRRNQPK
C15 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C16 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C17 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK
C18 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGQNNGNRGRRNQPK
C19 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK
C20 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C21 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C22 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C23 MSFVPGQENAGSRSSSGSRSGNGILKKTTWADQTERAGNNGNRGRRNQPK
C24 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C25 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRKNQPK
C26 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
C27 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
C28 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
***********.*** .*:****************. ****:*:**
C1 QTATTQPNTGSVVPHYSWFSGITQFQKGKEFQFAGGQGVPIANGIPSSEQ
C2 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C3 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C4 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C5 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASEQ
C6 QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ
C7 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C8 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFKFADGQGVPIANGIPASEQ
C9 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C10 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C11 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C12 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C13 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C14 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFVQGQGVPIANGIPASEQ
C15 QTATTQLNSGSVVPHYSWFSGITQFQKGKQFQFAEGQGVPIANGIPATEQ
C16 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C17 QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ
C18 QTATTQPNTGSVVPHYSWFSGITQFQKGKEFQFAGGQGVPIANGIPSSEQ
C19 QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ
C20 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C21 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C22 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C23 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFVQGQGVPIANGIPASEQ
C24 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C25 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C26 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
C27 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
C28 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
****** *:********************:*:*. *******.***:::*
C1 KGYWYRHNRRSFKTPGGQQKQLLPRWYFYYLGTGPHAGASFGDSIEGVFW
C2 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C3 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C4 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C5 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIDGVVW
C6 KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C7 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C8 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIDGVVW
C9 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C10 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C11 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C12 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C13 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C14 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C15 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDNIEGVVW
C16 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C17 KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C18 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASFGDSIEGVFW
C19 KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C20 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C21 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C22 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C23 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
C24 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C25 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C26 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
C27 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
C28 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
***************.**:****************:***.:**.*:**.*
C1 VANSQADTNTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C2 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C3 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C4 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C5 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C6 VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C7 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C8 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C9 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C10 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C11 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C12 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C13 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C14 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C15 VASHQADTKTSADIVERDPSSHEAIPTRFAPGTVIPQGFYVEGSGRSAPA
C16 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C17 VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C18 VANSQADTNTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C19 VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C20 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C21 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C22 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C23 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C24 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C25 VASQQAETRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C26 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C27 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
C28 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
**. **:*.* :*:********************:***************
C1 SRSGSRSQSRGPNNRARSSSNQRQAASTVKPDMAEEIAALVLAKLGKDAG
C2 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C3 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C4 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C5 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C6 SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG
C7 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C8 SRSGSRSQSRGPNNRSRSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C9 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C10 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C11 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C12 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C13 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C14 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C15 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C16 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C17 SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG
C18 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C19 SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG
C20 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C21 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C22 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C23 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C24 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C25 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C26 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C27 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
C28 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
******.********:********.**:**********************
C1 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C2 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C3 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C4 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C5 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C6 QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C7 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C8 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C9 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C10 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C11 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C12 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C13 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C14 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C15 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C16 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C17 QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C18 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C19 QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C20 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C21 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C22 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C23 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C24 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C25 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C26 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
C27 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
C28 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
******************.*****************************.*
C1 MLKLGTSDPQFPILAELAPTPGAFFFGSKLELVKKNSGGVDEPTKDVYEL
C2 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C3 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C4 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C5 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADDPTKDVYEL
C6 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
C7 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C8 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
C9 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C10 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C11 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C12 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C13 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C14 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADEPTKDVYEL
C15 MLKLGTNDPQFPILAELVPTPGAFFFGSKLELVKKNSGGADEPTKDVYEL
C16 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C17 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
C18 MLKLGTSDPQFPILAELAPTPGAFFFGSKLELVKKNSGGVDEPTKDVYEL
C19 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
C20 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C21 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C22 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C23 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADEPTKDVYEL
C24 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C25 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C26 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
C27 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
C28 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
******.**********.** .*****************.* ********
C1 HYSGAVRFDSTLSGFETIMKVLNENLNAYQNQAGGVDVVSPKPQRKRGTK
C2 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C3 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C4 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C5 QYSGAIRFDSTLPGFETIMKVLNENLDAYQDQAGGADVVSPKPQRKRGTK
C6 QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR
C7 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C8 QYSGAVRFDSTLPGFETIMKVLNENLNAYQDQAGGADVVSPKPQRKRGQR
C9 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C10 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C11 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C12 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C13 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C14 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C15 QYSGAVRFDSTLPGFETIMKVLNENLNAYQKESGGVDVVSPKPQRK-GRR
C16 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C17 QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR
C18 HYSGAVRFDSTLSGFETIMKVLNENLNAYQNQAGGVDVVSPKPQRKRGTK
C19 QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR
C20 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C21 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C22 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C23 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C24 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C25 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C26 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
C27 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
C28 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
:****:******.*********.***:*** : *..*:***** *: * :
C1 QTAQK--EELDSISVAQPKSAVQRNVSRELTPEDRSLLAQILDDGVVPDG
C2 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C3 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C4 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C5 QKALK--GEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C6 QAQEKK-DEVDNVSVAKPKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG
C7 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C8 QVAQKKNDEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C9 QAKEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C10 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C11 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C12 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C13 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C14 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C15 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C16 QALEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C17 QAQEKK-DEVDNVSVAKLKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG
C18 QTAQK--EELDSISVAQPKSAVQRNVSRELTPEDRSLLAQILDDGVVPDG
C19 QAQEKK-DEVDNVSVAKPKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG
C20 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C21 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C22 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C23 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C24 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C25 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C26 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C27 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
C28 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
* * *:*.:***: ** *****************************
C1 L-DDSNV
C2 LEDDSNV
C3 LEDDSNV
C4 VEDDSNV
C5 LEDDSNV
C6 LEDDSNV
C7 LEDDSNV
C8 LEDDSNV
C9 LEDDSNV
C10 LEDDSNV
C11 LEDDSNV
C12 LEDDSNV
C13 LEDDSNV
C14 LEDDSNV
C15 LEDDSKV
C16 LEDDSNV
C17 LEDDSNV
C18 L-DDSNV
C19 LEDDSNV
C20 LEDDSNV
C21 LEDDSNV
C22 LEDDSNV
C23 LEDDSNV
C24 LEDDSNV
C25 LEDDSNV
C26 LEDDSNV
C27 LEDDSNV
C28 LEDDSNV
: ***:*
-- Starting log on Wed Nov 02 21:48:55 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result/gapped_alignment/fubar,A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 28 taxa and 1371 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C11
Taxon 4 -> C12
Taxon 5 -> C13
Taxon 6 -> C14
Taxon 7 -> C15
Taxon 8 -> C16
Taxon 9 -> C17
Taxon 10 -> C18
Taxon 11 -> C19
Taxon 12 -> C2
Taxon 13 -> C20
Taxon 14 -> C21
Taxon 15 -> C22
Taxon 16 -> C23
Taxon 17 -> C24
Taxon 18 -> C25
Taxon 19 -> C26
Taxon 20 -> C27
Taxon 21 -> C28
Taxon 22 -> C3
Taxon 23 -> C4
Taxon 24 -> C5
Taxon 25 -> C6
Taxon 26 -> C7
Taxon 27 -> C8
Taxon 28 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1667425738
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1948733920
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 8497089588
Seed = 1777579640
Swapseed = 1667425738
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 57 unique site patterns
Division 2 has 41 unique site patterns
Division 3 has 119 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -8458.328829 -- 78.424211
Chain 2 -- -7840.703186 -- 78.424211
Chain 3 -- -8688.846091 -- 78.424211
Chain 4 -- -8750.909449 -- 78.424211
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -8025.883433 -- 78.424211
Chain 2 -- -9108.169914 -- 78.424211
Chain 3 -- -8777.953307 -- 78.424211
Chain 4 -- -8231.561924 -- 78.424211
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-8458.329] (-7840.703) (-8688.846) (-8750.909) * [-8025.883] (-9108.170) (-8777.953) (-8231.562)
1000 -- [-4135.207] (-4298.989) (-4147.292) (-4449.035) * [-4072.334] (-4083.302) (-4163.107) (-4097.006) -- 0:16:39
2000 -- (-3952.697) (-3937.648) [-3944.668] (-3984.531) * (-3926.824) [-3933.451] (-3959.752) (-3965.865) -- 0:16:38
3000 -- (-3912.114) (-3889.821) (-3960.088) [-3920.059] * [-3895.757] (-3924.466) (-3906.481) (-3918.532) -- 0:16:37
4000 -- (-3927.001) [-3883.648] (-3925.802) (-3902.400) * (-3891.116) (-3922.897) (-3901.209) [-3891.200] -- 0:20:45
5000 -- (-3899.061) [-3879.705] (-3925.449) (-3892.809) * [-3875.453] (-3904.843) (-3898.557) (-3907.786) -- 0:19:54
Average standard deviation of split frequencies: 0.084889
6000 -- (-3904.009) (-3898.828) (-3919.250) [-3888.309] * [-3874.180] (-3895.753) (-3880.104) (-3894.262) -- 0:19:19
7000 -- (-3884.250) [-3882.751] (-3891.936) (-3886.720) * (-3882.353) (-3890.844) [-3888.762] (-3907.891) -- 0:21:16
8000 -- (-3881.172) [-3876.558] (-3895.668) (-3898.745) * (-3876.901) (-3879.393) (-3891.456) [-3892.924] -- 0:20:40
9000 -- [-3890.591] (-3896.830) (-3893.323) (-3892.278) * (-3901.889) (-3892.651) [-3881.658] (-3894.994) -- 0:20:11
10000 -- (-3891.663) (-3905.404) [-3891.750] (-3893.307) * (-3874.274) (-3918.435) [-3876.840] (-3880.811) -- 0:19:48
Average standard deviation of split frequencies: 0.070031
11000 -- [-3875.585] (-3907.823) (-3884.892) (-3898.650) * [-3885.096] (-3916.104) (-3875.384) (-3889.670) -- 0:20:58
12000 -- (-3892.420) [-3894.130] (-3902.140) (-3894.262) * (-3889.496) (-3894.864) [-3884.805] (-3898.413) -- 0:20:35
13000 -- (-3902.449) (-3895.219) (-3880.809) [-3896.500] * (-3892.410) (-3884.561) [-3880.345] (-3895.329) -- 0:20:14
14000 -- (-3889.362) (-3901.398) (-3877.287) [-3873.070] * (-3906.535) (-3887.122) [-3893.190] (-3894.001) -- 0:21:07
15000 -- (-3896.714) (-3888.059) (-3888.156) [-3873.892] * [-3892.760] (-3894.683) (-3892.517) (-3885.528) -- 0:20:47
Average standard deviation of split frequencies: 0.053826
16000 -- (-3905.988) [-3879.235] (-3881.592) (-3878.409) * (-3890.604) (-3880.220) [-3882.965] (-3884.616) -- 0:20:30
17000 -- (-3905.299) (-3886.037) [-3878.048] (-3880.971) * (-3905.244) (-3891.615) (-3893.438) [-3877.065] -- 0:20:14
18000 -- (-3876.620) (-3888.105) (-3901.062) [-3878.271] * (-3912.693) (-3897.019) [-3878.131] (-3888.629) -- 0:20:54
19000 -- (-3897.896) (-3879.988) (-3895.674) [-3884.347] * (-3898.472) (-3908.814) [-3881.217] (-3885.728) -- 0:20:39
20000 -- [-3885.849] (-3901.661) (-3893.896) (-3881.883) * (-3906.387) (-3892.032) (-3876.116) [-3880.880] -- 0:20:25
Average standard deviation of split frequencies: 0.043498
21000 -- [-3882.489] (-3886.152) (-3892.700) (-3904.304) * (-3896.367) (-3892.263) (-3890.832) [-3886.115] -- 0:20:58
22000 -- [-3870.983] (-3892.187) (-3886.709) (-3899.779) * (-3873.938) [-3891.276] (-3887.524) (-3882.577) -- 0:20:44
23000 -- (-3883.413) (-3890.110) [-3880.075] (-3893.014) * (-3891.455) (-3887.858) (-3890.697) [-3890.795] -- 0:20:31
24000 -- (-3891.214) (-3885.215) (-3886.525) [-3877.023] * [-3884.012] (-3899.499) (-3893.353) (-3885.862) -- 0:20:20
25000 -- [-3877.120] (-3885.550) (-3893.217) (-3895.432) * [-3885.376] (-3877.654) (-3898.652) (-3891.216) -- 0:20:48
Average standard deviation of split frequencies: 0.041154
26000 -- (-3898.744) (-3899.604) [-3894.598] (-3887.323) * (-3896.990) (-3888.822) [-3883.154] (-3897.317) -- 0:20:36
27000 -- (-3882.511) [-3891.460] (-3903.555) (-3876.213) * (-3897.856) (-3892.148) [-3884.700] (-3887.005) -- 0:20:25
28000 -- [-3882.320] (-3893.357) (-3884.084) (-3886.416) * (-3881.338) (-3895.660) [-3883.785] (-3894.108) -- 0:20:15
29000 -- (-3888.560) (-3887.696) [-3877.185] (-3890.212) * (-3886.779) (-3901.135) [-3873.249] (-3898.802) -- 0:20:38
30000 -- (-3884.394) (-3871.400) (-3917.135) [-3872.486] * (-3882.802) (-3888.128) [-3882.718] (-3890.440) -- 0:20:28
Average standard deviation of split frequencies: 0.036471
31000 -- [-3887.193] (-3884.306) (-3897.587) (-3895.232) * [-3886.774] (-3896.216) (-3892.207) (-3911.306) -- 0:20:19
32000 -- (-3900.343) (-3890.569) [-3886.360] (-3889.378) * (-3885.645) [-3879.349] (-3894.059) (-3893.173) -- 0:20:10
33000 -- (-3904.836) (-3882.909) [-3885.779] (-3883.684) * (-3886.808) [-3890.970] (-3893.509) (-3884.140) -- 0:20:30
34000 -- (-3891.538) (-3883.882) [-3864.543] (-3886.598) * [-3885.216] (-3882.935) (-3885.498) (-3883.903) -- 0:20:21
35000 -- [-3888.441] (-3889.115) (-3875.337) (-3877.054) * [-3876.657] (-3877.953) (-3906.560) (-3878.546) -- 0:20:13
Average standard deviation of split frequencies: 0.037486
36000 -- [-3877.882] (-3897.088) (-3883.123) (-3891.967) * (-3900.158) (-3890.231) [-3891.017] (-3888.313) -- 0:20:31
37000 -- (-3879.245) (-3903.407) (-3888.720) [-3884.481] * (-3909.923) (-3896.000) (-3875.103) [-3884.628] -- 0:20:23
38000 -- (-3883.915) (-3894.036) [-3894.382] (-3886.409) * [-3893.965] (-3885.858) (-3890.463) (-3893.577) -- 0:20:15
39000 -- (-3888.533) (-3887.992) [-3886.397] (-3890.489) * [-3874.319] (-3883.308) (-3906.401) (-3884.952) -- 0:20:07
40000 -- (-3890.864) (-3903.786) [-3879.954] (-3899.211) * (-3893.264) (-3901.183) (-3888.118) [-3876.219] -- 0:20:24
Average standard deviation of split frequencies: 0.045628
41000 -- [-3885.274] (-3887.076) (-3901.537) (-3885.102) * (-3889.385) [-3891.002] (-3886.279) (-3886.560) -- 0:20:16
42000 -- [-3882.113] (-3917.547) (-3884.878) (-3889.047) * (-3877.210) (-3890.634) [-3878.119] (-3899.203) -- 0:20:08
43000 -- (-3882.481) (-3901.238) (-3885.413) [-3883.264] * (-3883.463) (-3903.672) (-3911.556) [-3874.440] -- 0:20:01
44000 -- (-3884.444) [-3878.719] (-3893.444) (-3887.839) * [-3873.484] (-3884.834) (-3881.730) (-3888.229) -- 0:20:16
45000 -- (-3896.622) (-3907.871) (-3891.318) [-3887.316] * (-3894.042) (-3906.194) [-3875.938] (-3894.526) -- 0:20:09
Average standard deviation of split frequencies: 0.041197
46000 -- [-3887.308] (-3892.205) (-3881.020) (-3905.784) * [-3888.337] (-3888.515) (-3884.204) (-3896.485) -- 0:20:02
47000 -- (-3882.935) [-3879.363] (-3897.707) (-3900.534) * (-3892.106) (-3897.965) [-3881.718] (-3890.971) -- 0:19:56
48000 -- (-3890.222) (-3883.703) [-3894.310] (-3900.536) * (-3893.608) [-3890.731] (-3875.343) (-3893.637) -- 0:20:09
49000 -- (-3892.915) (-3882.989) (-3883.721) [-3883.619] * [-3886.104] (-3880.870) (-3908.879) (-3892.003) -- 0:20:03
50000 -- (-3896.257) (-3875.370) [-3880.065] (-3882.624) * (-3893.340) [-3895.559] (-3882.243) (-3893.380) -- 0:19:57
Average standard deviation of split frequencies: 0.043862
51000 -- (-3888.562) (-3873.752) [-3877.182] (-3899.484) * (-3901.872) (-3909.233) [-3877.880] (-3887.444) -- 0:20:09
52000 -- [-3887.128] (-3917.956) (-3881.761) (-3878.148) * (-3883.013) (-3896.376) [-3881.046] (-3891.680) -- 0:20:03
53000 -- (-3886.419) (-3897.720) (-3881.159) [-3886.095] * (-3889.936) [-3885.071] (-3884.754) (-3888.245) -- 0:19:57
54000 -- (-3893.708) [-3891.208] (-3889.271) (-3887.827) * (-3890.655) (-3879.935) (-3888.284) [-3882.512] -- 0:19:51
55000 -- (-3903.064) (-3872.773) (-3896.990) [-3880.736] * (-3906.090) [-3870.949] (-3893.993) (-3867.153) -- 0:20:02
Average standard deviation of split frequencies: 0.043025
56000 -- (-3884.188) [-3872.692] (-3883.413) (-3894.131) * (-3891.937) (-3895.648) (-3883.449) [-3879.765] -- 0:19:56
57000 -- [-3871.947] (-3890.213) (-3897.270) (-3907.458) * (-3891.996) [-3880.364] (-3876.055) (-3879.678) -- 0:19:51
58000 -- [-3879.186] (-3893.447) (-3879.392) (-3875.411) * (-3893.710) [-3883.082] (-3886.850) (-3895.110) -- 0:19:45
59000 -- (-3889.684) (-3895.635) (-3900.976) [-3878.089] * (-3897.537) (-3891.685) [-3878.149] (-3904.522) -- 0:19:56
60000 -- (-3893.844) [-3900.383] (-3905.341) (-3883.449) * (-3903.956) (-3888.045) [-3873.002] (-3898.016) -- 0:19:50
Average standard deviation of split frequencies: 0.046446
61000 -- [-3877.606] (-3899.931) (-3896.148) (-3878.341) * (-3906.188) (-3880.133) [-3876.570] (-3891.191) -- 0:19:45
62000 -- (-3891.993) (-3897.244) (-3902.656) [-3886.602] * (-3903.662) (-3915.415) (-3884.667) [-3879.720] -- 0:19:40
63000 -- (-3888.417) (-3892.952) (-3898.802) [-3883.534] * (-3879.696) (-3899.679) (-3874.225) [-3889.544] -- 0:19:49
64000 -- [-3879.994] (-3896.754) (-3900.191) (-3889.333) * [-3877.659] (-3894.011) (-3874.230) (-3905.609) -- 0:19:44
65000 -- (-3906.217) (-3895.032) (-3884.639) [-3887.412] * (-3896.066) (-3909.658) [-3890.180] (-3893.971) -- 0:19:39
Average standard deviation of split frequencies: 0.044283
66000 -- (-3884.155) (-3903.888) (-3883.498) [-3891.648] * [-3891.460] (-3895.642) (-3918.214) (-3895.690) -- 0:19:34
67000 -- (-3899.439) [-3890.271] (-3894.533) (-3885.871) * (-3891.284) (-3892.708) (-3914.229) [-3887.439] -- 0:19:43
68000 -- [-3873.218] (-3886.347) (-3888.697) (-3908.700) * (-3889.585) [-3882.182] (-3903.802) (-3889.556) -- 0:19:38
69000 -- [-3891.384] (-3900.394) (-3882.894) (-3899.248) * (-3892.535) (-3889.724) [-3887.745] (-3881.344) -- 0:19:33
70000 -- (-3889.735) [-3882.201] (-3888.309) (-3889.357) * (-3900.166) (-3908.225) [-3885.569] (-3883.062) -- 0:19:29
Average standard deviation of split frequencies: 0.044085
71000 -- (-3892.939) [-3873.254] (-3886.712) (-3899.475) * (-3912.351) (-3898.859) (-3899.769) [-3883.940] -- 0:19:37
72000 -- (-3884.616) (-3897.366) (-3902.031) [-3886.085] * [-3884.113] (-3886.297) (-3890.450) (-3908.517) -- 0:19:32
73000 -- (-3895.830) (-3905.819) (-3878.695) [-3873.590] * (-3895.439) (-3888.699) [-3882.944] (-3883.342) -- 0:19:28
74000 -- (-3883.010) [-3892.529] (-3890.957) (-3880.757) * [-3882.674] (-3892.007) (-3908.671) (-3888.024) -- 0:19:23
75000 -- (-3900.764) [-3877.489] (-3897.779) (-3913.815) * [-3886.617] (-3910.584) (-3887.190) (-3894.733) -- 0:19:31
Average standard deviation of split frequencies: 0.043689
76000 -- (-3908.145) [-3884.811] (-3894.004) (-3897.793) * (-3900.923) (-3904.072) (-3879.416) [-3876.156] -- 0:19:27
77000 -- (-3881.538) [-3886.005] (-3881.046) (-3889.259) * (-3915.786) (-3898.035) (-3871.373) [-3888.771] -- 0:19:22
78000 -- (-3887.923) (-3889.323) [-3883.452] (-3892.614) * [-3891.242] (-3895.597) (-3874.068) (-3886.530) -- 0:19:30
79000 -- (-3873.387) [-3879.311] (-3885.507) (-3900.454) * (-3899.750) (-3898.096) [-3901.037] (-3902.655) -- 0:19:25
80000 -- (-3882.983) [-3880.710] (-3889.022) (-3894.172) * [-3878.945] (-3895.564) (-3886.810) (-3885.366) -- 0:19:21
Average standard deviation of split frequencies: 0.045192
81000 -- (-3880.485) [-3876.829] (-3888.920) (-3876.045) * (-3887.018) (-3906.271) [-3884.569] (-3898.573) -- 0:19:17
82000 -- [-3880.670] (-3904.534) (-3883.603) (-3867.812) * [-3881.529] (-3892.751) (-3892.408) (-3899.135) -- 0:19:24
83000 -- [-3876.469] (-3882.946) (-3899.661) (-3894.677) * (-3879.495) [-3887.641] (-3904.202) (-3893.672) -- 0:19:20
84000 -- [-3878.934] (-3906.749) (-3892.481) (-3878.635) * (-3894.191) (-3904.574) (-3895.230) [-3878.574] -- 0:19:15
85000 -- (-3882.128) (-3896.930) (-3892.052) [-3881.490] * (-3899.458) (-3909.126) (-3888.727) [-3875.236] -- 0:19:11
Average standard deviation of split frequencies: 0.042938
86000 -- (-3881.999) (-3907.735) [-3877.917] (-3911.125) * (-3883.508) (-3895.212) (-3906.441) [-3871.225] -- 0:19:18
87000 -- (-3906.163) (-3893.311) [-3888.342] (-3905.234) * (-3892.053) [-3887.783] (-3898.538) (-3895.402) -- 0:19:14
88000 -- (-3896.819) [-3887.214] (-3895.145) (-3905.127) * [-3884.615] (-3898.122) (-3896.289) (-3886.816) -- 0:19:10
89000 -- (-3904.023) [-3885.887] (-3886.812) (-3878.374) * (-3892.367) (-3904.572) [-3882.969] (-3893.133) -- 0:19:16
90000 -- (-3902.250) (-3897.822) [-3888.006] (-3882.542) * [-3877.171] (-3888.427) (-3879.946) (-3893.944) -- 0:19:12
Average standard deviation of split frequencies: 0.043807
91000 -- [-3898.118] (-3890.537) (-3889.528) (-3890.746) * (-3881.446) (-3902.123) [-3898.899] (-3895.182) -- 0:19:08
92000 -- (-3901.547) [-3871.023] (-3905.416) (-3892.737) * (-3884.783) [-3878.886] (-3899.771) (-3900.671) -- 0:19:04
93000 -- [-3891.830] (-3890.356) (-3895.474) (-3897.347) * (-3895.556) [-3893.281] (-3895.187) (-3894.970) -- 0:19:10
94000 -- (-3884.131) [-3884.056] (-3879.546) (-3896.605) * (-3890.743) (-3891.679) [-3894.328] (-3885.994) -- 0:19:06
95000 -- (-3895.375) (-3881.936) (-3874.121) [-3882.846] * (-3882.678) (-3893.617) (-3887.662) [-3879.246] -- 0:19:03
Average standard deviation of split frequencies: 0.044621
96000 -- [-3883.619] (-3891.418) (-3890.410) (-3898.233) * [-3894.118] (-3891.893) (-3897.618) (-3886.649) -- 0:18:59
97000 -- (-3895.592) [-3887.540] (-3896.752) (-3886.382) * (-3881.945) (-3887.897) [-3888.660] (-3885.202) -- 0:19:05
98000 -- (-3893.731) (-3893.218) (-3890.456) [-3891.006] * (-3908.402) (-3893.482) [-3887.508] (-3877.833) -- 0:19:01
99000 -- (-3900.702) (-3884.799) (-3884.119) [-3876.295] * (-3896.605) (-3893.956) [-3880.322] (-3877.780) -- 0:18:57
100000 -- (-3898.300) (-3911.034) [-3886.267] (-3887.139) * (-3882.084) (-3903.854) [-3887.681] (-3893.966) -- 0:19:03
Average standard deviation of split frequencies: 0.044955
101000 -- (-3921.689) (-3892.059) (-3903.787) [-3877.192] * [-3883.206] (-3888.915) (-3896.830) (-3896.599) -- 0:18:59
102000 -- (-3879.820) [-3876.246] (-3900.083) (-3889.665) * (-3893.488) (-3879.390) [-3873.282] (-3897.123) -- 0:19:04
103000 -- [-3874.725] (-3877.483) (-3889.858) (-3894.244) * (-3917.068) (-3886.478) [-3870.789] (-3889.253) -- 0:19:00
104000 -- (-3896.135) [-3879.055] (-3890.890) (-3888.617) * (-3883.190) (-3908.111) [-3880.373] (-3893.105) -- 0:18:57
105000 -- (-3880.476) (-3901.892) (-3900.075) [-3875.332] * [-3878.414] (-3891.101) (-3891.577) (-3885.317) -- 0:18:53
Average standard deviation of split frequencies: 0.041507
106000 -- (-3889.886) (-3900.323) (-3907.574) [-3867.425] * [-3875.776] (-3896.841) (-3903.913) (-3882.917) -- 0:18:58
107000 -- (-3890.220) (-3884.560) (-3889.446) [-3874.329] * [-3893.196] (-3887.490) (-3876.909) (-3884.440) -- 0:18:55
108000 -- (-3899.928) (-3893.967) (-3899.062) [-3876.976] * (-3892.766) [-3888.605] (-3889.073) (-3887.403) -- 0:18:51
109000 -- (-3887.411) [-3881.395] (-3902.340) (-3898.641) * [-3878.950] (-3888.584) (-3886.157) (-3895.058) -- 0:18:56
110000 -- (-3876.534) [-3880.195] (-3901.447) (-3885.416) * (-3875.643) (-3900.167) (-3903.222) [-3883.312] -- 0:18:52
Average standard deviation of split frequencies: 0.042984
111000 -- (-3891.094) (-3884.033) (-3890.357) [-3891.468] * (-3907.345) (-3894.585) (-3896.433) [-3877.410] -- 0:18:49
112000 -- (-3899.617) (-3901.233) [-3875.436] (-3886.877) * (-3885.448) (-3897.093) [-3881.469] (-3894.960) -- 0:18:45
113000 -- (-3898.383) (-3886.330) [-3880.450] (-3914.285) * (-3889.538) (-3900.432) (-3884.505) [-3879.088] -- 0:18:50
114000 -- (-3896.159) [-3878.841] (-3889.358) (-3886.902) * (-3898.712) [-3889.857] (-3876.908) (-3886.380) -- 0:18:46
115000 -- (-3903.351) (-3895.920) (-3885.769) [-3881.699] * (-3895.289) (-3894.788) [-3883.672] (-3892.669) -- 0:18:43
Average standard deviation of split frequencies: 0.041606
116000 -- (-3900.510) (-3890.665) (-3890.230) [-3873.713] * (-3884.204) (-3914.359) [-3872.276] (-3880.862) -- 0:18:40
117000 -- (-3892.363) [-3883.468] (-3891.777) (-3877.843) * (-3886.927) (-3912.658) [-3882.048] (-3887.935) -- 0:18:36
118000 -- (-3888.800) [-3882.744] (-3891.069) (-3907.508) * (-3888.116) (-3915.650) [-3876.267] (-3891.652) -- 0:18:41
119000 -- (-3895.690) (-3876.608) [-3891.813] (-3894.068) * (-3884.257) (-3908.098) (-3889.268) [-3878.647] -- 0:18:37
120000 -- [-3891.836] (-3884.235) (-3904.002) (-3891.474) * (-3881.513) (-3895.506) [-3888.726] (-3899.038) -- 0:18:34
Average standard deviation of split frequencies: 0.040369
121000 -- [-3884.452] (-3891.361) (-3887.347) (-3892.897) * [-3867.564] (-3897.377) (-3880.433) (-3896.802) -- 0:18:31
122000 -- (-3894.967) (-3892.445) [-3879.576] (-3894.908) * [-3876.660] (-3896.982) (-3882.561) (-3895.566) -- 0:18:35
123000 -- [-3879.190] (-3887.602) (-3874.012) (-3887.049) * [-3875.321] (-3885.845) (-3890.021) (-3888.198) -- 0:18:32
124000 -- [-3871.330] (-3890.141) (-3878.147) (-3892.193) * (-3894.049) (-3898.414) (-3890.905) [-3883.082] -- 0:18:29
125000 -- (-3906.984) [-3875.118] (-3880.239) (-3889.099) * [-3879.431] (-3899.795) (-3900.579) (-3886.509) -- 0:18:26
Average standard deviation of split frequencies: 0.039462
126000 -- [-3889.734] (-3881.422) (-3885.990) (-3899.972) * (-3880.976) (-3899.214) (-3894.671) [-3880.829] -- 0:18:29
127000 -- [-3884.810] (-3884.267) (-3893.089) (-3889.391) * (-3889.987) (-3899.339) (-3888.398) [-3884.822] -- 0:18:26
128000 -- [-3895.016] (-3899.407) (-3887.783) (-3886.148) * (-3881.499) (-3900.873) [-3883.355] (-3884.672) -- 0:18:23
129000 -- (-3884.185) (-3904.260) (-3881.268) [-3883.085] * (-3891.020) (-3895.781) [-3894.441] (-3881.834) -- 0:18:20
130000 -- (-3902.838) (-3886.607) (-3887.320) [-3888.145] * [-3878.505] (-3893.561) (-3887.303) (-3880.995) -- 0:18:24
Average standard deviation of split frequencies: 0.037537
131000 -- (-3896.015) (-3888.892) [-3873.157] (-3905.151) * (-3896.049) (-3895.156) [-3903.247] (-3886.693) -- 0:18:21
132000 -- [-3882.546] (-3889.471) (-3886.264) (-3888.624) * (-3905.007) (-3897.084) [-3878.383] (-3888.379) -- 0:18:18
133000 -- (-3888.559) [-3888.232] (-3907.111) (-3885.952) * (-3896.003) (-3888.062) (-3891.807) [-3890.082] -- 0:18:21
134000 -- (-3899.609) (-3914.336) (-3875.102) [-3876.722] * (-3891.187) (-3900.235) (-3879.236) [-3882.117] -- 0:18:18
135000 -- (-3892.828) (-3879.080) [-3879.484] (-3872.853) * (-3893.343) (-3899.600) (-3881.707) [-3881.392] -- 0:18:15
Average standard deviation of split frequencies: 0.033732
136000 -- (-3881.886) (-3879.991) [-3877.679] (-3870.837) * (-3887.412) [-3885.190] (-3900.390) (-3881.721) -- 0:18:12
137000 -- [-3878.471] (-3913.875) (-3899.552) (-3877.852) * [-3878.331] (-3890.886) (-3900.751) (-3884.556) -- 0:18:16
138000 -- (-3890.005) (-3908.777) (-3879.283) [-3888.112] * [-3881.430] (-3904.508) (-3892.225) (-3884.558) -- 0:18:13
139000 -- [-3876.908] (-3897.798) (-3881.551) (-3906.877) * [-3881.624] (-3898.487) (-3893.079) (-3896.077) -- 0:18:10
140000 -- [-3891.376] (-3903.136) (-3897.148) (-3889.744) * (-3897.671) (-3899.041) (-3890.221) [-3891.299] -- 0:18:07
Average standard deviation of split frequencies: 0.033261
141000 -- (-3886.986) (-3900.566) (-3891.203) [-3885.258] * (-3899.933) (-3898.671) (-3897.278) [-3894.011] -- 0:18:10
142000 -- [-3888.370] (-3896.581) (-3882.004) (-3898.697) * (-3890.814) (-3888.958) [-3881.832] (-3905.026) -- 0:18:07
143000 -- [-3882.349] (-3884.054) (-3899.479) (-3880.793) * [-3893.097] (-3908.180) (-3890.392) (-3889.708) -- 0:18:04
144000 -- [-3873.770] (-3902.031) (-3887.473) (-3886.525) * (-3890.830) (-3898.121) (-3878.391) [-3888.729] -- 0:18:07
145000 -- (-3884.696) (-3894.155) (-3900.258) [-3880.417] * (-3880.129) (-3898.223) [-3874.737] (-3900.212) -- 0:18:04
Average standard deviation of split frequencies: 0.032209
146000 -- (-3883.501) [-3874.525] (-3891.339) (-3891.614) * [-3879.380] (-3890.683) (-3883.902) (-3891.420) -- 0:18:02
147000 -- [-3875.219] (-3904.949) (-3887.316) (-3896.301) * (-3901.255) (-3892.341) (-3880.661) [-3879.132] -- 0:18:05
148000 -- (-3891.422) (-3901.547) [-3888.064] (-3882.716) * (-3881.452) [-3884.274] (-3879.469) (-3890.095) -- 0:18:02
149000 -- [-3884.442] (-3899.120) (-3897.055) (-3887.003) * (-3882.531) (-3887.087) [-3888.389] (-3908.478) -- 0:17:59
150000 -- [-3886.322] (-3892.354) (-3903.678) (-3888.758) * (-3887.536) (-3876.424) (-3897.355) [-3872.858] -- 0:17:56
Average standard deviation of split frequencies: 0.032305
151000 -- (-3880.681) (-3908.326) (-3885.921) [-3878.462] * (-3887.255) (-3899.410) (-3890.469) [-3875.839] -- 0:17:59
152000 -- [-3879.949] (-3889.270) (-3886.944) (-3888.294) * (-3900.401) (-3902.494) [-3897.468] (-3881.935) -- 0:17:56
153000 -- (-3898.512) (-3892.899) [-3897.531] (-3900.741) * (-3883.371) (-3894.890) (-3897.671) [-3876.456] -- 0:17:53
154000 -- [-3882.533] (-3887.102) (-3884.521) (-3882.863) * (-3881.328) (-3899.849) (-3886.007) [-3877.036] -- 0:17:51
155000 -- (-3889.355) [-3879.764] (-3887.878) (-3881.167) * [-3885.335] (-3902.244) (-3885.425) (-3903.236) -- 0:17:53
Average standard deviation of split frequencies: 0.030955
156000 -- (-3903.374) (-3910.437) [-3879.435] (-3885.588) * (-3894.078) (-3876.751) [-3882.587] (-3886.016) -- 0:17:51
157000 -- (-3897.921) [-3887.685] (-3896.230) (-3877.746) * (-3901.471) (-3896.443) (-3883.902) [-3881.678] -- 0:17:48
158000 -- (-3885.257) (-3890.995) [-3884.825] (-3909.003) * (-3896.359) (-3889.070) [-3883.937] (-3897.762) -- 0:17:51
159000 -- (-3898.232) (-3877.186) [-3874.649] (-3888.970) * [-3883.204] (-3891.607) (-3882.129) (-3881.372) -- 0:17:48
160000 -- (-3912.241) [-3886.083] (-3890.635) (-3884.065) * [-3882.643] (-3906.528) (-3888.556) (-3892.052) -- 0:17:45
Average standard deviation of split frequencies: 0.029265
161000 -- (-3885.323) [-3893.976] (-3889.450) (-3894.467) * (-3884.480) (-3895.710) [-3890.188] (-3886.140) -- 0:17:48
162000 -- (-3877.208) [-3888.668] (-3882.961) (-3900.582) * (-3898.756) (-3897.446) (-3879.227) [-3873.790] -- 0:17:45
163000 -- (-3887.250) [-3888.878] (-3890.931) (-3904.246) * (-3892.013) [-3891.920] (-3885.954) (-3879.206) -- 0:17:42
164000 -- (-3886.772) (-3907.412) (-3883.783) [-3874.652] * (-3883.024) (-3884.852) [-3890.438] (-3911.206) -- 0:17:40
165000 -- [-3880.202] (-3899.284) (-3887.591) (-3907.313) * (-3891.285) (-3890.801) (-3904.124) [-3889.741] -- 0:17:42
Average standard deviation of split frequencies: 0.031170
166000 -- (-3894.047) (-3900.650) (-3893.597) [-3902.736] * (-3887.801) [-3883.541] (-3899.042) (-3896.955) -- 0:17:40
167000 -- (-3888.720) (-3898.014) [-3876.625] (-3904.693) * (-3890.723) (-3888.313) [-3884.889] (-3899.245) -- 0:17:37
168000 -- (-3895.573) (-3880.676) (-3894.411) [-3889.349] * [-3899.788] (-3897.513) (-3890.942) (-3904.190) -- 0:17:34
169000 -- (-3888.274) [-3892.056] (-3900.441) (-3888.158) * [-3886.023] (-3901.128) (-3891.574) (-3888.269) -- 0:17:37
170000 -- (-3900.089) [-3886.904] (-3910.199) (-3888.208) * [-3891.812] (-3906.939) (-3881.438) (-3891.124) -- 0:17:34
Average standard deviation of split frequencies: 0.031797
171000 -- (-3897.120) [-3886.045] (-3883.510) (-3906.778) * (-3883.833) (-3899.935) [-3885.217] (-3883.242) -- 0:17:32
172000 -- (-3927.789) (-3881.477) [-3892.324] (-3888.317) * (-3880.097) [-3886.671] (-3891.422) (-3912.873) -- 0:17:34
173000 -- [-3892.404] (-3890.857) (-3886.656) (-3870.664) * [-3881.949] (-3883.027) (-3889.999) (-3901.820) -- 0:17:31
174000 -- [-3871.140] (-3897.966) (-3911.627) (-3875.163) * (-3897.515) (-3897.160) [-3874.732] (-3883.815) -- 0:17:29
175000 -- (-3883.197) [-3874.536] (-3898.945) (-3883.374) * (-3887.912) (-3901.536) [-3880.617] (-3886.254) -- 0:17:26
Average standard deviation of split frequencies: 0.032889
176000 -- (-3874.579) [-3884.503] (-3898.120) (-3891.728) * [-3883.616] (-3890.914) (-3888.656) (-3909.006) -- 0:17:28
177000 -- [-3882.886] (-3891.314) (-3882.542) (-3877.673) * (-3887.176) (-3894.814) [-3885.815] (-3886.718) -- 0:17:26
178000 -- (-3881.626) [-3893.193] (-3891.711) (-3888.038) * (-3886.677) [-3882.282] (-3876.732) (-3905.611) -- 0:17:23
179000 -- (-3898.733) [-3886.090] (-3882.124) (-3891.003) * (-3880.692) [-3890.300] (-3887.394) (-3904.050) -- 0:17:25
180000 -- (-3896.096) (-3901.433) [-3880.315] (-3890.649) * [-3881.361] (-3900.578) (-3889.407) (-3897.216) -- 0:17:23
Average standard deviation of split frequencies: 0.035766
181000 -- (-3880.161) (-3901.129) [-3881.009] (-3892.348) * [-3873.114] (-3887.454) (-3888.151) (-3903.167) -- 0:17:20
182000 -- [-3872.081] (-3909.467) (-3887.890) (-3899.580) * (-3892.664) (-3885.567) [-3894.499] (-3901.839) -- 0:17:22
183000 -- (-3896.583) (-3886.206) [-3873.278] (-3895.539) * [-3873.665] (-3899.482) (-3885.073) (-3882.464) -- 0:17:20
184000 -- (-3884.649) (-3898.051) [-3875.922] (-3886.793) * [-3887.105] (-3886.017) (-3887.216) (-3891.062) -- 0:17:17
185000 -- (-3890.577) (-3895.890) [-3875.971] (-3889.624) * [-3872.485] (-3904.119) (-3895.054) (-3895.539) -- 0:17:15
Average standard deviation of split frequencies: 0.034480
186000 -- (-3884.767) [-3886.401] (-3888.278) (-3884.728) * (-3894.755) (-3909.017) [-3883.825] (-3904.987) -- 0:17:17
187000 -- [-3884.424] (-3896.849) (-3896.119) (-3877.475) * (-3884.350) (-3888.863) [-3870.231] (-3897.682) -- 0:17:14
188000 -- [-3881.886] (-3902.375) (-3887.363) (-3878.216) * (-3896.817) (-3892.389) (-3885.378) [-3874.737] -- 0:17:12
189000 -- (-3899.870) [-3882.428] (-3885.690) (-3887.971) * [-3878.747] (-3895.405) (-3908.933) (-3883.188) -- 0:17:09
190000 -- (-3899.850) [-3882.107] (-3901.504) (-3885.523) * [-3876.615] (-3895.963) (-3895.470) (-3902.282) -- 0:17:11
Average standard deviation of split frequencies: 0.033546
191000 -- (-3887.326) [-3888.602] (-3890.150) (-3891.719) * (-3876.836) (-3899.205) (-3877.802) [-3886.894] -- 0:17:09
192000 -- (-3885.086) (-3899.117) [-3876.053] (-3875.201) * (-3880.529) (-3896.144) (-3899.830) [-3874.692] -- 0:17:06
193000 -- (-3883.766) (-3884.508) [-3875.196] (-3892.524) * (-3896.950) (-3900.388) (-3881.199) [-3884.620] -- 0:17:04
194000 -- (-3889.652) (-3895.846) [-3881.288] (-3891.354) * (-3890.120) (-3905.992) (-3890.217) [-3866.366] -- 0:17:06
195000 -- (-3902.026) (-3887.304) [-3871.351] (-3887.873) * [-3880.798] (-3912.762) (-3878.283) (-3887.065) -- 0:17:03
Average standard deviation of split frequencies: 0.032499
196000 -- (-3900.334) (-3892.427) (-3882.009) [-3874.341] * [-3886.283] (-3921.740) (-3887.954) (-3886.049) -- 0:17:01
197000 -- [-3888.437] (-3893.483) (-3898.374) (-3876.999) * (-3880.005) (-3897.896) [-3875.252] (-3889.126) -- 0:16:59
198000 -- (-3900.521) [-3893.311] (-3889.385) (-3892.043) * (-3883.881) (-3898.769) [-3878.386] (-3873.996) -- 0:17:00
199000 -- [-3879.842] (-3916.785) (-3884.246) (-3893.740) * (-3892.081) (-3895.672) [-3884.213] (-3892.754) -- 0:16:58
200000 -- (-3889.572) [-3890.645] (-3894.233) (-3896.014) * [-3884.122] (-3882.659) (-3890.003) (-3888.724) -- 0:16:56
Average standard deviation of split frequencies: 0.030178
201000 -- [-3876.868] (-3910.386) (-3894.052) (-3896.773) * [-3876.443] (-3893.336) (-3912.450) (-3913.439) -- 0:16:53
202000 -- (-3892.614) [-3888.998] (-3895.698) (-3894.161) * (-3896.618) (-3889.460) (-3890.453) [-3883.128] -- 0:16:55
203000 -- (-3896.197) (-3892.003) [-3879.928] (-3883.876) * (-3896.824) (-3891.725) (-3904.927) [-3889.702] -- 0:16:52
204000 -- (-3891.470) (-3897.159) [-3879.126] (-3898.384) * (-3888.357) [-3898.170] (-3893.772) (-3917.903) -- 0:16:50
205000 -- (-3896.820) (-3899.974) (-3888.794) [-3886.889] * (-3897.418) [-3889.913] (-3886.842) (-3889.747) -- 0:16:52
Average standard deviation of split frequencies: 0.032746
206000 -- [-3871.609] (-3895.169) (-3887.817) (-3884.836) * [-3882.482] (-3904.899) (-3879.150) (-3904.662) -- 0:16:49
207000 -- [-3876.624] (-3889.458) (-3899.693) (-3877.309) * [-3881.848] (-3880.291) (-3897.480) (-3904.518) -- 0:16:47
208000 -- (-3909.352) (-3892.563) [-3880.702] (-3883.922) * (-3884.536) (-3901.291) [-3879.298] (-3904.312) -- 0:16:45
209000 -- (-3896.004) (-3890.493) [-3882.014] (-3891.883) * [-3884.282] (-3895.769) (-3870.592) (-3896.171) -- 0:16:46
210000 -- [-3881.177] (-3887.739) (-3892.070) (-3905.319) * [-3884.383] (-3907.958) (-3888.293) (-3899.235) -- 0:16:44
Average standard deviation of split frequencies: 0.029516
211000 -- (-3896.907) (-3878.635) [-3882.354] (-3903.755) * (-3887.517) (-3894.163) [-3886.565] (-3897.418) -- 0:16:42
212000 -- (-3900.204) (-3892.398) [-3888.686] (-3885.476) * (-3879.399) (-3884.705) [-3873.342] (-3898.829) -- 0:16:39
213000 -- [-3889.487] (-3879.957) (-3885.424) (-3892.239) * [-3876.632] (-3897.163) (-3889.743) (-3900.435) -- 0:16:41
214000 -- (-3891.460) (-3893.094) (-3878.285) [-3883.752] * [-3877.147] (-3898.544) (-3898.414) (-3887.125) -- 0:16:39
215000 -- (-3889.238) [-3882.560] (-3896.797) (-3892.625) * (-3885.164) [-3878.189] (-3886.971) (-3895.004) -- 0:16:36
Average standard deviation of split frequencies: 0.030075
216000 -- (-3919.455) [-3884.637] (-3888.278) (-3900.505) * (-3906.936) (-3892.349) [-3897.035] (-3891.010) -- 0:16:34
217000 -- [-3891.036] (-3888.990) (-3900.149) (-3894.364) * (-3898.146) (-3891.710) [-3895.565] (-3906.474) -- 0:16:35
218000 -- [-3886.046] (-3888.559) (-3893.667) (-3902.740) * (-3896.035) (-3896.255) [-3893.302] (-3885.458) -- 0:16:33
219000 -- (-3880.951) (-3901.937) [-3886.350] (-3890.758) * (-3901.920) (-3894.381) (-3897.165) [-3899.740] -- 0:16:31
220000 -- (-3884.665) (-3905.856) (-3883.767) [-3883.980] * (-3925.050) (-3909.474) (-3893.596) [-3892.318] -- 0:16:29
Average standard deviation of split frequencies: 0.030168
221000 -- [-3883.029] (-3908.906) (-3879.361) (-3892.079) * [-3878.324] (-3887.004) (-3896.748) (-3880.053) -- 0:16:30
222000 -- (-3886.864) (-3894.267) [-3885.191] (-3886.977) * (-3893.995) [-3880.898] (-3896.899) (-3877.334) -- 0:16:28
223000 -- (-3896.379) [-3874.249] (-3874.758) (-3891.710) * (-3894.259) (-3904.068) [-3875.973] (-3892.405) -- 0:16:26
224000 -- (-3887.146) [-3880.639] (-3897.856) (-3893.041) * (-3885.723) (-3920.700) [-3870.045] (-3895.109) -- 0:16:27
225000 -- (-3880.646) (-3896.664) [-3898.324] (-3894.114) * [-3874.366] (-3898.107) (-3875.819) (-3894.810) -- 0:16:25
Average standard deviation of split frequencies: 0.029202
226000 -- (-3894.232) [-3878.035] (-3910.918) (-3907.109) * [-3875.876] (-3919.209) (-3886.073) (-3874.337) -- 0:16:22
227000 -- (-3894.055) (-3894.096) [-3872.575] (-3905.695) * (-3881.433) (-3899.966) (-3879.165) [-3885.952] -- 0:16:20
228000 -- (-3897.845) [-3899.472] (-3888.711) (-3893.039) * (-3889.810) (-3898.113) (-3878.811) [-3893.396] -- 0:16:21
229000 -- [-3883.869] (-3893.202) (-3882.110) (-3895.231) * (-3883.220) [-3893.117] (-3884.370) (-3888.917) -- 0:16:19
230000 -- (-3890.189) (-3885.490) [-3879.214] (-3901.501) * (-3916.635) (-3882.439) [-3886.390] (-3882.793) -- 0:16:17
Average standard deviation of split frequencies: 0.028918
231000 -- (-3877.903) (-3905.234) [-3891.776] (-3891.677) * (-3899.816) (-3895.755) [-3883.670] (-3884.889) -- 0:16:18
232000 -- [-3874.236] (-3896.987) (-3871.502) (-3892.618) * (-3883.787) (-3897.078) [-3884.339] (-3892.647) -- 0:16:16
233000 -- (-3888.722) (-3889.623) [-3873.571] (-3906.049) * [-3894.598] (-3895.281) (-3891.336) (-3907.316) -- 0:16:14
234000 -- (-3892.070) (-3904.643) (-3883.840) [-3884.600] * (-3885.660) (-3892.273) (-3888.202) [-3877.001] -- 0:16:12
235000 -- (-3888.422) [-3879.321] (-3900.264) (-3880.267) * [-3891.083] (-3905.422) (-3892.365) (-3878.205) -- 0:16:13
Average standard deviation of split frequencies: 0.029063
236000 -- (-3911.632) [-3885.847] (-3872.327) (-3880.180) * (-3888.308) (-3919.058) [-3882.210] (-3883.490) -- 0:16:11
237000 -- (-3904.487) (-3882.683) [-3887.247] (-3891.182) * (-3884.716) (-3901.388) [-3900.728] (-3905.720) -- 0:16:09
238000 -- (-3890.712) (-3883.983) [-3877.181] (-3882.144) * (-3895.112) [-3873.461] (-3884.454) (-3895.012) -- 0:16:10
239000 -- [-3869.929] (-3906.037) (-3886.455) (-3890.110) * (-3877.314) (-3905.140) [-3887.767] (-3892.024) -- 0:16:07
240000 -- (-3878.929) [-3884.294] (-3898.929) (-3884.639) * [-3887.976] (-3900.677) (-3888.089) (-3895.872) -- 0:16:05
Average standard deviation of split frequencies: 0.028377
241000 -- (-3895.403) [-3881.539] (-3885.690) (-3883.588) * (-3897.239) (-3883.522) [-3881.629] (-3883.847) -- 0:16:06
242000 -- (-3886.240) (-3909.452) (-3889.400) [-3889.910] * (-3895.246) (-3899.114) (-3879.860) [-3883.510] -- 0:16:04
243000 -- [-3888.325] (-3903.945) (-3897.731) (-3890.458) * [-3885.212] (-3889.487) (-3891.726) (-3908.366) -- 0:16:02
244000 -- (-3901.122) [-3879.632] (-3884.845) (-3894.433) * (-3899.906) (-3895.794) [-3882.168] (-3896.502) -- 0:16:00
245000 -- (-3893.395) [-3877.680] (-3908.144) (-3887.719) * (-3893.123) (-3882.987) [-3887.110] (-3906.054) -- 0:16:01
Average standard deviation of split frequencies: 0.029186
246000 -- (-3881.944) (-3889.351) [-3886.495] (-3875.972) * (-3876.505) (-3884.876) (-3885.833) [-3894.181] -- 0:15:59
247000 -- (-3895.927) (-3883.231) (-3905.855) [-3884.995] * (-3883.988) [-3894.979] (-3894.403) (-3901.105) -- 0:15:57
248000 -- (-3882.318) [-3883.055] (-3895.798) (-3880.478) * [-3897.891] (-3897.905) (-3893.054) (-3890.414) -- 0:15:55
249000 -- (-3891.186) [-3873.545] (-3893.826) (-3890.105) * (-3891.361) (-3894.579) [-3885.761] (-3895.458) -- 0:15:56
250000 -- (-3894.000) [-3890.629] (-3888.525) (-3875.804) * [-3886.316] (-3903.027) (-3885.694) (-3885.164) -- 0:15:53
Average standard deviation of split frequencies: 0.028450
251000 -- (-3891.643) (-3878.744) (-3901.698) [-3873.008] * (-3897.419) (-3906.487) [-3892.193] (-3900.234) -- 0:15:51
252000 -- (-3880.594) (-3910.866) (-3887.425) [-3871.985] * (-3880.342) (-3913.022) [-3891.885] (-3892.117) -- 0:15:52
253000 -- [-3886.628] (-3888.386) (-3891.730) (-3878.058) * (-3885.311) (-3896.985) (-3887.338) [-3892.329] -- 0:15:50
254000 -- (-3903.476) (-3879.120) [-3884.855] (-3880.657) * (-3890.537) (-3894.546) [-3885.679] (-3893.012) -- 0:15:48
255000 -- (-3902.962) [-3879.871] (-3888.322) (-3876.662) * (-3883.847) (-3910.982) [-3884.943] (-3883.357) -- 0:15:49
Average standard deviation of split frequencies: 0.027810
256000 -- [-3883.872] (-3888.244) (-3874.058) (-3895.193) * (-3902.483) (-3902.075) [-3871.192] (-3910.096) -- 0:15:47
257000 -- (-3894.457) (-3898.535) (-3884.451) [-3878.324] * (-3887.107) (-3888.035) [-3872.071] (-3894.912) -- 0:15:45
258000 -- [-3876.763] (-3895.713) (-3903.715) (-3886.631) * [-3890.557] (-3902.295) (-3889.119) (-3880.703) -- 0:15:46
259000 -- (-3889.425) [-3891.540] (-3892.944) (-3890.412) * (-3874.501) (-3908.779) [-3888.085] (-3881.471) -- 0:15:44
260000 -- (-3888.265) (-3877.504) [-3893.597] (-3895.945) * (-3883.697) (-3895.684) (-3886.762) [-3882.019] -- 0:15:42
Average standard deviation of split frequencies: 0.026991
261000 -- (-3890.524) (-3886.897) [-3881.390] (-3887.201) * (-3891.418) (-3890.900) (-3910.573) [-3878.636] -- 0:15:40
262000 -- (-3895.733) [-3884.579] (-3878.710) (-3909.942) * [-3874.276] (-3898.084) (-3897.648) (-3880.271) -- 0:15:40
263000 -- (-3894.960) [-3881.891] (-3898.659) (-3891.720) * [-3882.688] (-3893.309) (-3895.376) (-3888.583) -- 0:15:38
264000 -- (-3899.031) (-3895.384) (-3898.528) [-3879.950] * (-3891.633) (-3885.453) (-3906.651) [-3872.628] -- 0:15:39
265000 -- [-3881.811] (-3885.751) (-3877.706) (-3893.100) * (-3901.745) [-3897.261] (-3889.003) (-3880.179) -- 0:15:37
Average standard deviation of split frequencies: 0.027292
266000 -- (-3893.000) (-3885.551) (-3897.516) [-3873.501] * (-3883.336) (-3906.906) [-3889.098] (-3886.631) -- 0:15:35
267000 -- (-3870.241) (-3898.113) (-3891.592) [-3874.155] * (-3883.414) (-3896.470) (-3897.910) [-3895.385] -- 0:15:33
268000 -- (-3885.152) (-3899.125) (-3896.729) [-3887.293] * (-3904.725) (-3888.566) [-3878.828] (-3887.493) -- 0:15:34
269000 -- (-3881.234) (-3907.053) [-3898.226] (-3889.501) * (-3899.882) (-3896.047) [-3881.736] (-3887.293) -- 0:15:32
270000 -- [-3879.551] (-3905.062) (-3886.164) (-3890.946) * [-3889.571] (-3897.094) (-3886.776) (-3880.789) -- 0:15:30
Average standard deviation of split frequencies: 0.027464
271000 -- [-3875.207] (-3896.794) (-3897.526) (-3881.652) * (-3897.413) (-3893.866) [-3880.011] (-3898.791) -- 0:15:28
272000 -- [-3876.416] (-3898.343) (-3896.547) (-3885.939) * [-3892.636] (-3902.853) (-3897.546) (-3896.655) -- 0:15:28
273000 -- (-3895.945) (-3884.465) (-3892.620) [-3888.810] * [-3884.804] (-3889.335) (-3878.906) (-3888.160) -- 0:15:26
274000 -- [-3884.795] (-3902.244) (-3907.014) (-3890.996) * (-3878.974) (-3886.772) [-3883.701] (-3901.032) -- 0:15:24
275000 -- (-3877.141) (-3902.662) (-3897.224) [-3873.190] * [-3877.968] (-3902.215) (-3885.472) (-3907.026) -- 0:15:22
Average standard deviation of split frequencies: 0.026627
276000 -- (-3894.828) (-3894.424) (-3878.297) [-3882.072] * (-3874.427) (-3900.539) (-3908.489) [-3900.237] -- 0:15:23
277000 -- (-3898.148) (-3901.058) [-3893.260] (-3876.366) * (-3901.587) (-3895.134) [-3894.389] (-3896.697) -- 0:15:21
278000 -- (-3899.790) (-3882.455) [-3873.180] (-3904.420) * [-3896.228] (-3878.932) (-3906.067) (-3896.773) -- 0:15:19
279000 -- (-3885.980) [-3872.321] (-3895.681) (-3900.268) * (-3891.559) (-3889.889) (-3894.931) [-3881.339] -- 0:15:19
280000 -- (-3892.051) (-3894.402) (-3889.085) [-3887.034] * [-3886.163] (-3898.074) (-3902.274) (-3890.272) -- 0:15:18
Average standard deviation of split frequencies: 0.025883
281000 -- (-3889.452) [-3886.525] (-3883.924) (-3894.220) * [-3888.645] (-3906.273) (-3902.767) (-3904.504) -- 0:15:16
282000 -- (-3895.531) [-3878.938] (-3891.315) (-3886.492) * (-3881.013) (-3891.111) [-3887.650] (-3898.423) -- 0:15:14
283000 -- [-3885.412] (-3880.958) (-3878.970) (-3876.354) * (-3887.717) (-3899.164) (-3889.983) [-3875.234] -- 0:15:14
284000 -- (-3886.049) (-3889.458) (-3898.234) [-3884.695] * (-3897.226) (-3886.036) (-3894.342) [-3898.078] -- 0:15:12
285000 -- (-3877.425) (-3897.117) (-3901.953) [-3877.152] * [-3877.819] (-3896.721) (-3895.789) (-3889.538) -- 0:15:10
Average standard deviation of split frequencies: 0.025442
286000 -- (-3905.385) (-3907.315) [-3888.133] (-3894.437) * [-3889.213] (-3895.725) (-3905.142) (-3894.494) -- 0:15:11
287000 -- (-3884.968) (-3904.290) [-3882.624] (-3888.740) * (-3899.870) (-3888.004) (-3904.196) [-3880.112] -- 0:15:09
288000 -- (-3881.569) (-3893.051) (-3908.378) [-3885.491] * (-3900.096) (-3896.241) [-3899.122] (-3891.113) -- 0:15:07
289000 -- (-3897.204) (-3888.521) [-3876.519] (-3895.017) * (-3914.610) [-3882.690] (-3904.086) (-3879.661) -- 0:15:07
290000 -- [-3880.251] (-3879.857) (-3897.866) (-3901.219) * (-3909.653) (-3907.934) (-3889.873) [-3880.095] -- 0:15:05
Average standard deviation of split frequencies: 0.026365
291000 -- (-3880.631) [-3877.933] (-3913.120) (-3900.306) * [-3887.670] (-3933.455) (-3886.864) (-3896.462) -- 0:15:03
292000 -- (-3885.283) (-3909.250) (-3900.005) [-3886.903] * (-3896.838) (-3896.855) (-3893.449) [-3881.220] -- 0:15:04
293000 -- [-3874.806] (-3900.926) (-3884.016) (-3903.453) * (-3888.551) (-3904.955) (-3888.847) [-3884.332] -- 0:15:02
294000 -- (-3895.457) [-3884.937] (-3892.043) (-3895.363) * (-3892.066) (-3901.513) [-3887.269] (-3874.148) -- 0:15:00
295000 -- (-3921.475) (-3878.747) (-3898.220) [-3883.864] * [-3880.979] (-3915.828) (-3886.995) (-3879.569) -- 0:15:00
Average standard deviation of split frequencies: 0.025440
296000 -- (-3908.373) [-3883.096] (-3897.007) (-3894.099) * [-3881.497] (-3906.842) (-3886.551) (-3886.226) -- 0:14:59
297000 -- [-3889.670] (-3881.993) (-3905.734) (-3900.069) * [-3878.696] (-3883.835) (-3883.570) (-3904.595) -- 0:14:57
298000 -- (-3901.683) (-3886.007) [-3888.137] (-3888.986) * (-3884.373) (-3888.043) [-3895.152] (-3894.801) -- 0:14:55
299000 -- (-3884.557) (-3888.364) [-3878.072] (-3895.320) * (-3877.027) (-3893.551) [-3878.122] (-3898.478) -- 0:14:55
300000 -- [-3881.823] (-3884.024) (-3885.616) (-3896.820) * (-3889.889) (-3920.893) (-3881.674) [-3888.523] -- 0:14:53
Average standard deviation of split frequencies: 0.024885
301000 -- (-3883.649) [-3883.368] (-3885.042) (-3892.510) * (-3889.315) (-3892.011) [-3879.240] (-3885.865) -- 0:14:51
302000 -- (-3901.762) (-3869.297) (-3885.292) [-3886.953] * (-3904.135) (-3903.178) (-3886.328) [-3880.799] -- 0:14:49
303000 -- (-3899.037) (-3893.008) [-3889.670] (-3877.026) * (-3887.158) (-3912.033) (-3875.582) [-3887.485] -- 0:14:50
304000 -- (-3895.752) (-3886.472) (-3903.618) [-3874.536] * (-3896.335) (-3893.538) (-3884.161) [-3874.515] -- 0:14:48
305000 -- (-3895.802) (-3877.886) (-3899.754) [-3882.579] * [-3886.264] (-3902.188) (-3907.496) (-3889.967) -- 0:14:46
Average standard deviation of split frequencies: 0.024412
306000 -- (-3892.911) [-3884.653] (-3899.473) (-3874.725) * (-3885.900) (-3898.283) (-3893.886) [-3893.599] -- 0:14:44
307000 -- (-3907.290) [-3883.243] (-3885.136) (-3883.334) * (-3885.134) [-3880.420] (-3889.210) (-3896.534) -- 0:14:44
308000 -- (-3892.101) (-3886.627) (-3899.644) [-3866.653] * (-3879.061) (-3915.738) [-3885.050] (-3908.885) -- 0:14:42
309000 -- (-3899.015) (-3897.642) (-3890.901) [-3879.560] * (-3886.939) (-3896.591) [-3875.379] (-3914.847) -- 0:14:41
310000 -- (-3896.050) (-3889.841) [-3897.751] (-3918.568) * [-3885.540] (-3887.389) (-3881.351) (-3894.936) -- 0:14:41
Average standard deviation of split frequencies: 0.024084
311000 -- (-3890.172) (-3885.242) [-3878.707] (-3891.184) * (-3887.695) (-3899.258) [-3885.412] (-3886.872) -- 0:14:39
312000 -- (-3907.402) (-3882.635) [-3882.210] (-3884.835) * (-3901.706) (-3898.889) (-3880.186) [-3895.419] -- 0:14:37
313000 -- (-3894.727) [-3894.917] (-3902.014) (-3896.766) * (-3905.654) [-3904.523] (-3903.910) (-3888.066) -- 0:14:35
314000 -- (-3905.017) (-3888.890) (-3888.683) [-3885.385] * (-3888.782) (-3893.896) [-3890.536] (-3890.885) -- 0:14:36
315000 -- (-3890.290) (-3896.020) [-3880.478] (-3879.084) * (-3896.007) (-3890.694) [-3887.450] (-3881.952) -- 0:14:34
Average standard deviation of split frequencies: 0.023792
316000 -- (-3896.809) [-3884.045] (-3902.216) (-3876.315) * (-3888.236) [-3883.767] (-3876.605) (-3914.751) -- 0:14:32
317000 -- [-3884.525] (-3890.364) (-3891.900) (-3891.912) * (-3888.969) (-3893.699) [-3864.874] (-3893.711) -- 0:14:30
318000 -- [-3875.665] (-3900.607) (-3887.662) (-3879.584) * (-3897.421) (-3888.970) [-3877.324] (-3906.694) -- 0:14:30
319000 -- [-3880.875] (-3904.337) (-3882.953) (-3880.398) * (-3882.957) (-3898.026) [-3878.758] (-3889.364) -- 0:14:28
320000 -- (-3893.981) (-3893.558) (-3888.898) [-3874.060] * (-3889.888) (-3888.459) (-3885.535) [-3873.519] -- 0:14:27
Average standard deviation of split frequencies: 0.024087
321000 -- (-3893.745) (-3896.809) (-3882.794) [-3877.151] * (-3888.298) (-3890.477) [-3885.293] (-3894.006) -- 0:14:27
322000 -- [-3894.068] (-3893.428) (-3890.585) (-3891.309) * (-3884.737) (-3903.468) (-3889.149) [-3888.834] -- 0:14:25
323000 -- (-3914.367) [-3892.311] (-3912.435) (-3884.570) * (-3882.098) (-3901.517) (-3889.640) [-3882.930] -- 0:14:23
324000 -- (-3911.308) (-3884.596) (-3905.731) [-3875.314] * [-3877.493] (-3881.307) (-3888.592) (-3880.175) -- 0:14:21
325000 -- (-3887.646) (-3886.178) [-3884.785] (-3880.705) * [-3884.960] (-3890.409) (-3902.016) (-3887.366) -- 0:14:21
Average standard deviation of split frequencies: 0.023841
326000 -- (-3892.323) (-3885.762) [-3891.874] (-3897.020) * (-3879.453) (-3910.402) (-3887.665) [-3889.997] -- 0:14:20
327000 -- (-3894.976) (-3893.650) [-3883.301] (-3878.532) * (-3873.415) (-3906.543) (-3894.039) [-3893.132] -- 0:14:18
328000 -- (-3900.388) (-3894.590) [-3888.410] (-3894.399) * (-3890.460) (-3898.277) [-3878.007] (-3895.218) -- 0:14:16
329000 -- (-3887.314) (-3879.956) [-3892.413] (-3901.600) * [-3884.069] (-3903.407) (-3892.864) (-3900.002) -- 0:14:16
330000 -- [-3875.995] (-3888.597) (-3883.489) (-3893.309) * (-3898.512) (-3883.178) (-3892.973) [-3871.626] -- 0:14:14
Average standard deviation of split frequencies: 0.023614
331000 -- (-3877.220) (-3903.435) [-3873.838] (-3892.521) * (-3893.928) (-3883.463) (-3892.311) [-3878.330] -- 0:14:12
332000 -- (-3900.317) (-3898.765) [-3880.011] (-3901.394) * (-3890.524) [-3883.816] (-3891.421) (-3896.712) -- 0:14:11
333000 -- (-3889.170) (-3888.554) (-3889.228) [-3884.178] * (-3890.378) (-3900.091) (-3908.196) [-3872.845] -- 0:14:11
334000 -- (-3894.874) [-3881.468] (-3876.016) (-3896.055) * [-3876.011] (-3898.174) (-3889.292) (-3881.074) -- 0:14:09
335000 -- (-3897.084) (-3879.819) [-3889.184] (-3890.757) * [-3881.091] (-3901.652) (-3899.505) (-3879.813) -- 0:14:07
Average standard deviation of split frequencies: 0.023095
336000 -- [-3892.385] (-3872.070) (-3906.514) (-3896.403) * (-3890.402) (-3905.787) (-3906.360) [-3877.633] -- 0:14:05
337000 -- (-3895.183) (-3892.558) [-3888.870] (-3878.226) * (-3903.728) [-3883.642] (-3894.933) (-3887.966) -- 0:14:05
338000 -- [-3889.213] (-3895.800) (-3892.163) (-3900.197) * [-3893.013] (-3897.655) (-3889.432) (-3889.876) -- 0:14:04
339000 -- (-3910.655) (-3883.974) (-3890.015) [-3878.470] * (-3888.653) (-3894.184) [-3887.856] (-3895.031) -- 0:14:02
340000 -- (-3901.480) (-3895.567) (-3912.240) [-3886.333] * [-3882.722] (-3888.556) (-3895.749) (-3903.269) -- 0:14:02
Average standard deviation of split frequencies: 0.023808
341000 -- (-3894.601) (-3890.610) (-3888.412) [-3890.086] * (-3887.732) (-3889.632) [-3875.018] (-3898.861) -- 0:14:00
342000 -- (-3891.479) [-3881.043] (-3882.596) (-3907.442) * (-3894.539) [-3896.908] (-3885.337) (-3908.930) -- 0:13:58
343000 -- [-3894.961] (-3898.607) (-3888.641) (-3898.786) * [-3874.213] (-3889.955) (-3878.473) (-3890.743) -- 0:13:58
344000 -- (-3890.839) (-3899.615) [-3880.249] (-3894.896) * [-3871.936] (-3905.622) (-3876.330) (-3899.576) -- 0:13:57
345000 -- (-3881.922) (-3887.239) [-3885.001] (-3890.598) * [-3871.236] (-3922.448) (-3880.878) (-3884.687) -- 0:13:55
Average standard deviation of split frequencies: 0.023266
346000 -- [-3879.887] (-3876.794) (-3881.216) (-3875.738) * [-3879.821] (-3896.615) (-3905.002) (-3891.612) -- 0:13:53
347000 -- [-3879.152] (-3881.224) (-3889.120) (-3897.528) * (-3887.745) (-3918.371) [-3876.014] (-3878.011) -- 0:13:53
348000 -- (-3888.615) [-3880.372] (-3886.088) (-3885.305) * [-3899.980] (-3902.960) (-3896.439) (-3895.260) -- 0:13:51
349000 -- [-3871.180] (-3879.785) (-3893.284) (-3902.188) * (-3886.555) (-3904.394) (-3895.428) [-3891.959] -- 0:13:50
350000 -- (-3880.979) (-3897.115) [-3891.312] (-3879.527) * (-3893.469) (-3890.423) (-3887.103) [-3884.712] -- 0:13:50
Average standard deviation of split frequencies: 0.022233
351000 -- (-3873.401) [-3873.287] (-3881.982) (-3890.287) * (-3892.733) (-3900.093) (-3886.784) [-3878.576] -- 0:13:48
352000 -- [-3871.507] (-3880.298) (-3880.760) (-3899.843) * (-3889.015) (-3874.411) (-3889.805) [-3879.213] -- 0:13:46
353000 -- [-3874.347] (-3895.404) (-3887.421) (-3902.908) * (-3896.058) (-3895.551) (-3893.423) [-3884.766] -- 0:13:44
354000 -- (-3887.135) (-3891.508) [-3894.787] (-3891.418) * (-3888.034) (-3891.557) (-3892.675) [-3870.628] -- 0:13:43
355000 -- (-3891.149) [-3883.773] (-3895.128) (-3892.218) * [-3879.932] (-3893.672) (-3882.076) (-3885.639) -- 0:13:43
Average standard deviation of split frequencies: 0.020594
356000 -- (-3887.459) (-3882.703) [-3886.673] (-3905.721) * (-3888.346) (-3891.132) (-3904.642) [-3875.007] -- 0:13:41
357000 -- (-3885.713) (-3887.304) [-3876.576] (-3879.086) * (-3880.310) (-3892.748) [-3882.847] (-3885.355) -- 0:13:39
358000 -- (-3901.237) (-3891.503) [-3873.062] (-3879.139) * [-3884.397] (-3902.800) (-3882.631) (-3881.820) -- 0:13:39
359000 -- (-3892.507) (-3882.339) (-3890.585) [-3875.838] * (-3888.354) (-3878.376) [-3877.843] (-3880.108) -- 0:13:37
360000 -- (-3895.705) (-3898.327) [-3889.836] (-3895.638) * (-3895.369) [-3885.580] (-3896.522) (-3884.467) -- 0:13:36
Average standard deviation of split frequencies: 0.020259
361000 -- (-3895.164) (-3904.653) [-3891.175] (-3903.958) * [-3890.129] (-3895.082) (-3887.624) (-3901.256) -- 0:13:34
362000 -- (-3904.146) [-3876.894] (-3876.436) (-3907.615) * (-3889.456) (-3887.142) [-3899.590] (-3906.115) -- 0:13:34
363000 -- (-3877.295) (-3891.221) [-3884.886] (-3909.966) * [-3878.218] (-3892.841) (-3907.661) (-3884.513) -- 0:13:32
364000 -- [-3890.660] (-3903.768) (-3901.753) (-3905.063) * (-3886.480) (-3887.682) (-3898.568) [-3882.053] -- 0:13:30
365000 -- (-3893.018) (-3895.423) [-3890.530] (-3888.128) * (-3891.392) (-3890.524) (-3896.475) [-3884.429] -- 0:13:28
Average standard deviation of split frequencies: 0.021334
366000 -- (-3907.023) (-3900.044) [-3876.454] (-3922.516) * [-3878.614] (-3902.028) (-3898.792) (-3871.324) -- 0:13:28
367000 -- (-3888.645) [-3877.108] (-3883.932) (-3888.265) * (-3885.010) (-3897.016) (-3915.431) [-3871.636] -- 0:13:27
368000 -- (-3914.289) (-3888.451) (-3882.049) [-3882.592] * (-3882.493) (-3902.226) (-3881.864) [-3876.831] -- 0:13:25
369000 -- [-3894.962] (-3889.824) (-3892.046) (-3878.339) * (-3892.820) (-3900.705) (-3880.127) [-3877.497] -- 0:13:25
370000 -- (-3892.900) (-3887.733) [-3879.251] (-3897.139) * [-3872.248] (-3911.787) (-3890.185) (-3877.422) -- 0:13:23
Average standard deviation of split frequencies: 0.020315
371000 -- [-3897.905] (-3879.084) (-3893.472) (-3897.529) * (-3886.662) (-3902.857) (-3878.080) [-3878.162] -- 0:13:21
372000 -- (-3885.782) [-3880.352] (-3884.529) (-3887.934) * [-3882.356] (-3905.757) (-3879.684) (-3887.565) -- 0:13:20
373000 -- (-3895.332) (-3885.678) [-3889.881] (-3887.099) * [-3884.259] (-3909.916) (-3880.789) (-3896.750) -- 0:13:20
374000 -- (-3886.646) (-3884.863) (-3900.704) [-3884.073] * (-3906.602) (-3890.943) [-3888.532] (-3889.018) -- 0:13:18
375000 -- (-3899.122) [-3879.549] (-3910.975) (-3883.241) * (-3888.986) (-3890.526) [-3893.020] (-3900.224) -- 0:13:16
Average standard deviation of split frequencies: 0.020093
376000 -- (-3893.035) [-3888.362] (-3914.731) (-3909.756) * [-3879.560] (-3900.885) (-3898.254) (-3894.397) -- 0:13:14
377000 -- (-3890.823) [-3880.859] (-3894.199) (-3895.080) * [-3879.836] (-3884.185) (-3906.165) (-3894.013) -- 0:13:14
378000 -- (-3899.472) (-3896.145) (-3900.606) [-3880.205] * (-3892.771) (-3925.065) (-3888.843) [-3876.395] -- 0:13:13
379000 -- (-3895.719) [-3879.136] (-3894.408) (-3892.966) * [-3876.766] (-3895.688) (-3886.187) (-3907.794) -- 0:13:11
380000 -- [-3878.136] (-3879.575) (-3895.533) (-3898.177) * [-3885.544] (-3888.630) (-3885.389) (-3886.124) -- 0:13:09
Average standard deviation of split frequencies: 0.016718
381000 -- [-3877.814] (-3875.963) (-3902.075) (-3889.861) * (-3886.214) (-3892.673) [-3878.907] (-3898.368) -- 0:13:09
382000 -- (-3880.583) [-3884.491] (-3896.107) (-3887.061) * (-3881.874) (-3897.764) [-3889.935] (-3908.443) -- 0:13:07
383000 -- [-3883.374] (-3914.506) (-3897.004) (-3895.497) * (-3908.132) (-3903.921) (-3871.841) [-3882.784] -- 0:13:06
384000 -- (-3882.339) (-3892.998) [-3889.076] (-3891.976) * [-3885.872] (-3904.283) (-3898.899) (-3896.134) -- 0:13:06
385000 -- (-3888.825) (-3899.384) (-3884.378) [-3882.377] * (-3891.936) (-3905.716) (-3882.316) [-3884.615] -- 0:13:04
Average standard deviation of split frequencies: 0.016690
386000 -- (-3895.437) (-3906.380) (-3873.940) [-3874.806] * (-3892.303) (-3907.856) [-3873.743] (-3887.654) -- 0:13:02
387000 -- (-3897.519) (-3899.663) (-3894.963) [-3878.689] * (-3892.875) (-3895.033) (-3880.416) [-3893.036] -- 0:13:00
388000 -- (-3903.410) (-3898.431) [-3879.826] (-3881.950) * (-3893.275) (-3892.833) (-3896.417) [-3887.629] -- 0:13:00
389000 -- (-3896.640) (-3902.512) [-3888.778] (-3892.503) * (-3882.436) (-3901.724) [-3883.627] (-3916.047) -- 0:12:59
390000 -- (-3887.003) (-3881.675) (-3895.150) [-3881.897] * [-3868.068] (-3894.635) (-3904.094) (-3892.154) -- 0:12:57
Average standard deviation of split frequencies: 0.016122
391000 -- (-3882.980) [-3881.620] (-3883.367) (-3896.192) * (-3888.920) (-3888.712) [-3900.031] (-3896.104) -- 0:12:57
392000 -- [-3880.895] (-3887.244) (-3904.107) (-3899.536) * (-3904.100) (-3889.093) [-3889.428] (-3905.285) -- 0:12:55
393000 -- (-3883.231) (-3889.646) [-3878.603] (-3911.182) * (-3883.953) [-3878.296] (-3890.011) (-3887.399) -- 0:12:53
394000 -- (-3895.776) [-3890.678] (-3889.030) (-3881.247) * (-3883.638) [-3898.244] (-3879.362) (-3877.235) -- 0:12:52
395000 -- (-3890.311) [-3889.945] (-3888.337) (-3901.566) * [-3881.899] (-3894.823) (-3884.365) (-3892.507) -- 0:12:51
Average standard deviation of split frequencies: 0.018596
396000 -- (-3891.280) [-3882.118] (-3896.358) (-3902.147) * (-3888.052) [-3881.350] (-3898.279) (-3892.861) -- 0:12:50
397000 -- [-3887.451] (-3876.251) (-3888.912) (-3891.270) * (-3908.774) [-3873.631] (-3883.722) (-3891.820) -- 0:12:48
398000 -- [-3876.292] (-3881.975) (-3888.696) (-3890.784) * (-3890.085) (-3883.688) (-3896.938) [-3887.326] -- 0:12:46
399000 -- [-3872.198] (-3905.218) (-3887.495) (-3892.972) * (-3887.710) (-3881.504) (-3892.081) [-3890.017] -- 0:12:46
400000 -- (-3899.605) (-3907.374) [-3888.633] (-3884.359) * [-3891.661] (-3891.147) (-3889.497) (-3897.387) -- 0:12:45
Average standard deviation of split frequencies: 0.020311
401000 -- (-3902.348) (-3926.455) [-3880.120] (-3889.696) * (-3894.406) (-3892.604) [-3882.888] (-3894.591) -- 0:12:43
402000 -- (-3907.022) (-3899.386) (-3881.176) [-3893.676] * (-3897.051) (-3899.504) [-3898.654] (-3907.599) -- 0:12:43
403000 -- [-3881.205] (-3894.752) (-3883.276) (-3892.664) * (-3874.633) (-3885.656) [-3886.309] (-3900.130) -- 0:12:41
404000 -- (-3886.664) (-3890.684) (-3887.166) [-3896.896] * (-3893.449) (-3898.551) (-3879.169) [-3884.024] -- 0:12:39
405000 -- [-3875.778] (-3887.689) (-3902.944) (-3891.308) * (-3887.090) (-3900.286) [-3878.290] (-3889.951) -- 0:12:38
Average standard deviation of split frequencies: 0.019828
406000 -- (-3887.646) (-3891.452) [-3896.669] (-3906.454) * (-3875.026) (-3889.536) (-3892.267) [-3890.724] -- 0:12:37
407000 -- (-3887.864) [-3874.597] (-3880.892) (-3887.990) * (-3893.973) (-3896.172) [-3896.300] (-3883.338) -- 0:12:36
408000 -- [-3882.912] (-3895.021) (-3880.641) (-3896.337) * [-3888.153] (-3900.042) (-3889.183) (-3896.952) -- 0:12:34
409000 -- (-3888.899) [-3877.871] (-3885.633) (-3893.479) * (-3901.287) (-3894.241) [-3878.814] (-3879.730) -- 0:12:32
410000 -- (-3885.654) (-3897.312) (-3880.693) [-3896.385] * (-3889.798) (-3900.860) (-3885.712) [-3887.336] -- 0:12:32
Average standard deviation of split frequencies: 0.019426
411000 -- [-3891.832] (-3899.559) (-3888.992) (-3905.778) * (-3881.494) (-3900.010) (-3879.593) [-3881.520] -- 0:12:30
412000 -- (-3888.543) [-3893.119] (-3882.489) (-3908.749) * [-3878.600] (-3907.805) (-3888.822) (-3875.392) -- 0:12:29
413000 -- (-3881.109) [-3882.366] (-3897.346) (-3902.733) * [-3885.291] (-3905.640) (-3888.961) (-3887.200) -- 0:12:29
414000 -- [-3879.375] (-3893.628) (-3880.005) (-3915.206) * [-3878.623] (-3892.110) (-3890.420) (-3891.095) -- 0:12:27
415000 -- [-3896.158] (-3884.153) (-3888.033) (-3910.800) * (-3905.121) (-3906.415) (-3879.194) [-3889.500] -- 0:12:25
Average standard deviation of split frequencies: 0.018280
416000 -- (-3908.728) (-3898.597) [-3875.079] (-3902.017) * (-3879.355) (-3892.286) (-3887.583) [-3876.135] -- 0:12:24
417000 -- (-3895.316) (-3883.122) [-3887.493] (-3905.992) * (-3885.734) (-3907.369) [-3895.012] (-3897.009) -- 0:12:23
418000 -- (-3887.774) (-3881.698) (-3888.452) [-3873.437] * (-3879.687) (-3890.937) [-3879.389] (-3877.914) -- 0:12:22
419000 -- (-3898.873) [-3877.712] (-3889.628) (-3884.646) * (-3900.335) (-3881.671) [-3881.852] (-3890.013) -- 0:12:20
420000 -- [-3868.521] (-3891.825) (-3893.870) (-3888.627) * (-3874.022) (-3895.165) [-3876.949] (-3899.569) -- 0:12:20
Average standard deviation of split frequencies: 0.016342
421000 -- [-3876.253] (-3894.485) (-3907.371) (-3894.876) * (-3875.002) (-3898.947) [-3887.756] (-3884.996) -- 0:12:18
422000 -- [-3877.096] (-3885.470) (-3916.317) (-3885.417) * (-3886.915) (-3898.125) (-3906.273) [-3887.522] -- 0:12:16
423000 -- (-3899.045) [-3877.144] (-3890.118) (-3903.742) * (-3879.493) [-3889.236] (-3892.022) (-3885.066) -- 0:12:15
424000 -- (-3894.082) (-3888.409) [-3880.297] (-3895.885) * (-3892.925) (-3894.113) (-3894.706) [-3885.903] -- 0:12:14
425000 -- (-3886.317) (-3910.726) [-3878.806] (-3887.358) * (-3879.669) (-3910.997) (-3888.010) [-3883.575] -- 0:12:13
Average standard deviation of split frequencies: 0.020628
426000 -- [-3883.565] (-3884.938) (-3899.136) (-3902.703) * [-3879.462] (-3920.161) (-3879.637) (-3890.711) -- 0:12:12
427000 -- [-3883.254] (-3880.203) (-3889.456) (-3905.316) * [-3895.698] (-3899.958) (-3881.300) (-3892.536) -- 0:12:11
428000 -- (-3890.647) (-3887.755) [-3884.371] (-3892.934) * (-3899.432) (-3899.736) [-3876.127] (-3892.278) -- 0:12:09
429000 -- (-3885.611) (-3895.319) [-3890.264] (-3879.709) * [-3881.200] (-3901.113) (-3892.434) (-3891.603) -- 0:12:09
430000 -- (-3897.011) [-3880.834] (-3879.168) (-3886.575) * (-3888.422) (-3906.568) [-3885.205] (-3889.243) -- 0:12:07
Average standard deviation of split frequencies: 0.019141
431000 -- [-3876.298] (-3905.577) (-3894.185) (-3885.709) * (-3905.707) (-3891.641) (-3887.272) [-3883.430] -- 0:12:06
432000 -- (-3902.031) (-3887.477) (-3916.021) [-3883.015] * [-3889.925] (-3898.234) (-3880.360) (-3893.856) -- 0:12:04
433000 -- [-3894.779] (-3902.939) (-3894.255) (-3884.555) * (-3889.560) (-3892.169) [-3885.441] (-3907.571) -- 0:12:04
434000 -- (-3894.724) (-3886.591) [-3876.082] (-3898.218) * [-3882.372] (-3900.048) (-3892.194) (-3890.747) -- 0:12:02
435000 -- [-3887.620] (-3893.762) (-3885.320) (-3888.507) * (-3890.253) (-3898.605) [-3890.580] (-3880.756) -- 0:12:00
Average standard deviation of split frequencies: 0.017726
436000 -- (-3895.548) (-3894.179) (-3881.492) [-3878.511] * (-3888.994) (-3889.401) (-3885.263) [-3884.512] -- 0:12:00
437000 -- (-3905.364) [-3877.909] (-3884.424) (-3882.582) * [-3875.890] (-3902.675) (-3896.471) (-3887.326) -- 0:11:58
438000 -- (-3906.321) [-3877.840] (-3887.484) (-3874.463) * (-3895.466) (-3909.442) [-3875.277] (-3893.347) -- 0:11:57
439000 -- (-3880.830) (-3898.219) (-3893.861) [-3874.331] * (-3884.039) (-3895.923) [-3874.852] (-3887.247) -- 0:11:56
440000 -- [-3893.473] (-3883.090) (-3878.660) (-3896.582) * (-3907.993) (-3897.171) [-3881.743] (-3891.734) -- 0:11:55
Average standard deviation of split frequencies: 0.017172
441000 -- (-3905.401) (-3913.407) (-3882.231) [-3877.810] * (-3890.583) (-3912.916) (-3882.977) [-3887.397] -- 0:11:53
442000 -- (-3890.558) (-3887.031) (-3882.513) [-3885.991] * (-3889.827) (-3892.739) [-3890.146] (-3881.553) -- 0:11:53
443000 -- (-3883.834) (-3881.715) [-3878.413] (-3892.319) * [-3893.369] (-3896.101) (-3886.328) (-3880.512) -- 0:11:51
444000 -- (-3869.557) [-3877.352] (-3899.004) (-3878.847) * (-3890.096) (-3899.790) [-3887.380] (-3887.891) -- 0:11:50
445000 -- (-3898.756) (-3895.302) (-3890.940) [-3883.056] * (-3876.493) (-3898.568) [-3877.306] (-3893.808) -- 0:11:48
Average standard deviation of split frequencies: 0.017384
446000 -- [-3892.185] (-3890.437) (-3875.336) (-3884.796) * [-3883.564] (-3906.681) (-3882.359) (-3883.556) -- 0:11:48
447000 -- [-3889.694] (-3899.901) (-3884.564) (-3874.348) * (-3901.755) [-3899.384] (-3906.654) (-3894.663) -- 0:11:46
448000 -- (-3906.992) [-3881.521] (-3898.765) (-3882.748) * [-3882.924] (-3889.286) (-3894.472) (-3912.185) -- 0:11:44
449000 -- [-3880.952] (-3893.136) (-3888.820) (-3888.929) * (-3871.862) (-3892.339) (-3884.750) [-3877.224] -- 0:11:44
450000 -- [-3878.052] (-3887.520) (-3884.439) (-3904.969) * [-3887.529] (-3903.543) (-3884.477) (-3897.077) -- 0:11:42
Average standard deviation of split frequencies: 0.017314
451000 -- (-3897.949) (-3888.821) [-3880.086] (-3888.462) * (-3897.559) (-3915.539) [-3879.160] (-3897.800) -- 0:11:41
452000 -- (-3896.296) [-3878.788] (-3884.893) (-3890.049) * (-3879.460) (-3906.924) (-3909.185) [-3878.539] -- 0:11:40
453000 -- (-3881.684) (-3898.884) (-3877.842) [-3881.329] * (-3888.227) [-3883.243] (-3885.881) (-3897.817) -- 0:11:39
454000 -- (-3885.813) (-3896.078) [-3880.988] (-3884.745) * (-3908.554) (-3896.851) [-3873.969] (-3889.487) -- 0:11:37
455000 -- (-3888.594) (-3901.506) [-3885.792] (-3888.133) * (-3891.196) (-3901.941) (-3886.377) [-3873.810] -- 0:11:37
Average standard deviation of split frequencies: 0.017043
456000 -- (-3901.344) (-3912.819) [-3886.791] (-3879.356) * (-3886.840) (-3890.622) [-3890.485] (-3882.325) -- 0:11:35
457000 -- (-3888.598) (-3886.767) [-3887.312] (-3890.236) * (-3901.446) [-3890.375] (-3885.182) (-3908.496) -- 0:11:33
458000 -- (-3906.327) (-3885.452) [-3882.741] (-3891.657) * [-3884.006] (-3920.544) (-3881.140) (-3882.111) -- 0:11:33
459000 -- [-3886.882] (-3889.757) (-3896.586) (-3899.447) * [-3875.531] (-3883.943) (-3894.267) (-3900.320) -- 0:11:31
460000 -- [-3886.502] (-3889.775) (-3884.940) (-3899.153) * [-3886.576] (-3898.073) (-3904.639) (-3907.887) -- 0:11:30
Average standard deviation of split frequencies: 0.016998
461000 -- (-3901.393) (-3896.867) [-3872.032] (-3899.857) * (-3884.335) (-3889.696) [-3882.243] (-3894.838) -- 0:11:28
462000 -- (-3883.541) [-3878.871] (-3885.190) (-3893.959) * [-3874.978] (-3894.688) (-3882.566) (-3884.560) -- 0:11:28
463000 -- [-3879.532] (-3892.054) (-3878.439) (-3905.293) * (-3879.008) (-3893.958) [-3878.499] (-3891.631) -- 0:11:26
464000 -- (-3891.380) (-3894.094) [-3881.250] (-3873.266) * (-3906.626) (-3885.831) [-3876.779] (-3879.304) -- 0:11:25
465000 -- (-3886.961) (-3887.188) (-3904.129) [-3866.828] * (-3887.768) (-3913.943) [-3877.459] (-3887.054) -- 0:11:24
Average standard deviation of split frequencies: 0.016732
466000 -- (-3891.841) (-3888.757) (-3888.470) [-3869.330] * (-3888.803) (-3904.543) [-3881.970] (-3885.883) -- 0:11:22
467000 -- (-3904.304) (-3899.963) (-3896.068) [-3872.792] * (-3899.170) (-3902.795) [-3884.643] (-3872.432) -- 0:11:21
468000 -- (-3889.929) (-3889.892) (-3896.112) [-3886.704] * (-3898.709) (-3900.900) (-3908.764) [-3878.291] -- 0:11:19
469000 -- [-3898.141] (-3891.261) (-3900.179) (-3888.395) * (-3905.431) (-3897.191) (-3891.619) [-3874.606] -- 0:11:19
470000 -- (-3887.555) (-3897.332) [-3908.604] (-3888.164) * (-3889.037) (-3892.747) (-3910.906) [-3883.103] -- 0:11:17
Average standard deviation of split frequencies: 0.016594
471000 -- [-3876.923] (-3911.931) (-3890.187) (-3880.008) * (-3889.404) (-3898.893) [-3882.278] (-3885.169) -- 0:11:16
472000 -- (-3899.410) (-3882.744) [-3878.303] (-3900.261) * (-3882.210) (-3892.234) [-3889.440] (-3883.783) -- 0:11:15
473000 -- [-3878.370] (-3893.668) (-3881.552) (-3889.295) * [-3880.685] (-3911.785) (-3892.190) (-3884.922) -- 0:11:14
474000 -- (-3886.783) [-3884.448] (-3886.940) (-3882.697) * [-3881.952] (-3891.064) (-3885.396) (-3891.441) -- 0:11:12
475000 -- (-3885.969) [-3872.859] (-3903.412) (-3893.584) * (-3874.094) (-3886.390) (-3907.532) [-3883.632] -- 0:11:12
Average standard deviation of split frequencies: 0.016506
476000 -- (-3888.909) (-3895.352) (-3891.799) [-3885.336] * (-3882.666) [-3892.291] (-3898.936) (-3885.586) -- 0:11:10
477000 -- (-3898.933) (-3885.619) [-3878.967] (-3906.717) * (-3898.856) (-3885.842) [-3882.319] (-3899.359) -- 0:11:08
478000 -- (-3898.134) (-3901.342) (-3889.676) [-3888.756] * [-3892.708] (-3894.474) (-3882.095) (-3905.287) -- 0:11:07
479000 -- (-3893.851) (-3905.447) (-3899.672) [-3884.652] * [-3889.374] (-3896.899) (-3910.671) (-3879.659) -- 0:11:06
480000 -- (-3888.705) (-3903.960) [-3875.419] (-3889.939) * (-3885.327) (-3895.303) (-3916.381) [-3886.267] -- 0:11:05
Average standard deviation of split frequencies: 0.017027
481000 -- (-3887.858) (-3887.204) [-3872.993] (-3911.486) * (-3882.054) [-3882.500] (-3909.924) (-3881.923) -- 0:11:03
482000 -- (-3887.968) [-3872.551] (-3899.847) (-3888.640) * (-3882.753) [-3890.475] (-3892.876) (-3877.855) -- 0:11:03
483000 -- (-3889.097) [-3872.751] (-3904.344) (-3905.564) * (-3884.299) (-3915.545) [-3878.813] (-3890.762) -- 0:11:01
484000 -- (-3874.024) (-3877.088) [-3876.428] (-3893.380) * (-3886.730) (-3900.999) (-3894.928) [-3887.631] -- 0:10:59
485000 -- [-3877.511] (-3885.316) (-3882.708) (-3901.052) * (-3881.332) (-3889.756) (-3901.160) [-3877.942] -- 0:10:58
Average standard deviation of split frequencies: 0.016974
486000 -- (-3894.090) [-3889.216] (-3887.578) (-3883.154) * (-3883.298) (-3896.013) [-3872.517] (-3887.298) -- 0:10:57
487000 -- (-3906.870) [-3878.687] (-3905.063) (-3899.762) * (-3901.783) (-3898.204) (-3895.760) [-3874.001] -- 0:10:56
488000 -- (-3894.376) (-3895.123) [-3884.259] (-3895.722) * (-3887.610) (-3896.584) (-3880.916) [-3901.389] -- 0:10:54
489000 -- (-3889.917) [-3885.241] (-3890.940) (-3895.084) * (-3896.949) [-3888.067] (-3889.727) (-3885.472) -- 0:10:53
490000 -- [-3873.654] (-3896.607) (-3894.139) (-3903.726) * (-3912.465) (-3891.230) (-3901.374) [-3878.457] -- 0:10:52
Average standard deviation of split frequencies: 0.017513
491000 -- (-3887.127) [-3880.907] (-3889.804) (-3895.387) * (-3895.966) (-3894.100) [-3904.268] (-3881.401) -- 0:10:51
492000 -- (-3893.810) (-3890.564) (-3876.280) [-3887.260] * [-3879.283] (-3888.236) (-3901.145) (-3879.341) -- 0:10:49
493000 -- (-3892.116) [-3879.065] (-3881.329) (-3895.954) * [-3882.107] (-3893.663) (-3889.949) (-3889.279) -- 0:10:47
494000 -- (-3898.835) (-3897.203) [-3883.306] (-3900.369) * [-3888.338] (-3906.678) (-3886.563) (-3877.323) -- 0:10:47
495000 -- (-3900.871) (-3888.923) [-3873.942] (-3892.671) * (-3888.973) (-3896.656) [-3897.412] (-3879.762) -- 0:10:45
Average standard deviation of split frequencies: 0.017387
496000 -- (-3893.647) (-3897.914) [-3881.899] (-3885.427) * (-3875.244) (-3898.444) (-3892.994) [-3896.203] -- 0:10:44
497000 -- (-3892.238) (-3879.414) [-3878.127] (-3903.596) * (-3877.069) (-3908.938) (-3894.685) [-3876.607] -- 0:10:42
498000 -- [-3883.435] (-3876.517) (-3884.718) (-3895.539) * (-3873.796) (-3885.903) (-3902.890) [-3878.678] -- 0:10:42
499000 -- (-3882.505) [-3886.038] (-3882.037) (-3884.041) * (-3901.726) [-3889.577] (-3900.775) (-3898.584) -- 0:10:40
500000 -- (-3897.209) [-3887.189] (-3886.454) (-3894.036) * (-3882.765) [-3883.029] (-3900.349) (-3890.683) -- 0:10:39
Average standard deviation of split frequencies: 0.018966
501000 -- (-3889.758) (-3906.250) [-3878.948] (-3899.168) * [-3887.837] (-3922.645) (-3888.241) (-3879.802) -- 0:10:38
502000 -- (-3896.109) (-3884.932) (-3877.508) [-3889.074] * [-3895.369] (-3914.420) (-3886.308) (-3887.528) -- 0:10:36
503000 -- (-3896.144) (-3878.368) (-3898.768) [-3885.887] * (-3888.917) (-3899.039) [-3874.760] (-3904.667) -- 0:10:35
504000 -- (-3893.526) [-3888.386] (-3903.462) (-3893.658) * [-3884.308] (-3891.283) (-3889.712) (-3886.387) -- 0:10:34
505000 -- [-3882.223] (-3889.797) (-3883.171) (-3891.387) * (-3878.437) (-3893.240) [-3876.310] (-3887.908) -- 0:10:33
Average standard deviation of split frequencies: 0.018553
506000 -- (-3886.422) (-3885.487) (-3887.714) [-3877.501] * [-3885.445] (-3916.448) (-3891.357) (-3882.551) -- 0:10:31
507000 -- [-3899.356] (-3897.855) (-3908.227) (-3887.915) * (-3886.616) (-3901.857) [-3885.186] (-3896.426) -- 0:10:31
508000 -- (-3892.065) (-3892.117) [-3886.768] (-3890.641) * [-3879.560] (-3895.018) (-3909.897) (-3865.678) -- 0:10:29
509000 -- [-3880.418] (-3889.441) (-3903.363) (-3889.907) * [-3873.957] (-3914.118) (-3914.001) (-3884.096) -- 0:10:27
510000 -- (-3890.741) [-3879.069] (-3885.210) (-3899.145) * (-3889.649) (-3911.033) (-3920.459) [-3893.951] -- 0:10:27
Average standard deviation of split frequencies: 0.016616
511000 -- (-3878.673) (-3906.543) (-3892.968) [-3888.118] * (-3894.552) (-3921.382) [-3890.514] (-3886.022) -- 0:10:25
512000 -- (-3886.141) (-3897.273) [-3896.808] (-3891.047) * (-3888.044) (-3891.938) (-3892.913) [-3879.197] -- 0:10:24
513000 -- (-3882.248) (-3896.509) (-3893.363) [-3870.384] * [-3890.167] (-3903.945) (-3887.525) (-3878.023) -- 0:10:22
514000 -- (-3900.614) (-3890.146) (-3888.450) [-3880.746] * [-3877.464] (-3906.638) (-3906.064) (-3886.312) -- 0:10:22
515000 -- (-3899.490) (-3879.493) [-3890.554] (-3883.825) * (-3884.033) (-3904.248) (-3892.392) [-3885.903] -- 0:10:20
Average standard deviation of split frequencies: 0.016982
516000 -- (-3896.150) (-3886.181) [-3881.660] (-3873.879) * [-3882.318] (-3907.032) (-3885.341) (-3887.850) -- 0:10:19
517000 -- (-3897.555) (-3893.255) [-3894.411] (-3885.144) * [-3881.166] (-3899.479) (-3895.600) (-3886.441) -- 0:10:18
518000 -- (-3890.544) (-3898.990) (-3881.330) [-3884.979] * (-3887.186) (-3900.500) (-3888.922) [-3877.792] -- 0:10:16
519000 -- (-3903.973) (-3888.190) [-3895.297] (-3890.343) * (-3878.971) [-3889.202] (-3885.511) (-3892.389) -- 0:10:15
520000 -- (-3902.667) (-3881.154) [-3888.005] (-3909.892) * (-3894.687) [-3884.382] (-3881.453) (-3886.236) -- 0:10:13
Average standard deviation of split frequencies: 0.017229
521000 -- [-3881.856] (-3896.816) (-3901.465) (-3897.460) * (-3895.067) (-3886.436) [-3879.073] (-3890.504) -- 0:10:13
522000 -- (-3891.532) (-3899.093) [-3900.015] (-3878.344) * [-3894.896] (-3887.301) (-3890.491) (-3928.535) -- 0:10:11
523000 -- (-3888.207) (-3881.987) (-3912.336) [-3882.048] * [-3876.221] (-3902.321) (-3883.660) (-3898.490) -- 0:10:10
524000 -- (-3893.783) [-3877.861] (-3883.935) (-3891.788) * [-3881.464] (-3893.489) (-3877.044) (-3893.625) -- 0:10:08
525000 -- [-3894.615] (-3877.736) (-3897.563) (-3889.585) * [-3885.659] (-3906.528) (-3877.983) (-3909.524) -- 0:10:08
Average standard deviation of split frequencies: 0.017318
526000 -- (-3890.156) [-3875.104] (-3900.369) (-3877.787) * (-3881.914) [-3899.438] (-3895.449) (-3910.828) -- 0:10:06
527000 -- (-3887.142) [-3883.290] (-3890.660) (-3893.156) * (-3889.799) (-3898.154) [-3885.966] (-3887.543) -- 0:10:04
528000 -- (-3880.785) [-3887.066] (-3905.049) (-3885.315) * (-3893.325) (-3892.788) (-3905.711) [-3886.050] -- 0:10:03
529000 -- (-3889.373) [-3886.558] (-3892.613) (-3894.408) * (-3892.352) [-3876.790] (-3901.744) (-3902.063) -- 0:10:02
530000 -- [-3892.629] (-3889.501) (-3888.409) (-3881.771) * (-3900.965) [-3894.169] (-3892.885) (-3895.904) -- 0:10:01
Average standard deviation of split frequencies: 0.020999
531000 -- (-3884.176) (-3885.115) [-3892.969] (-3898.928) * (-3892.843) (-3893.465) (-3886.760) [-3878.471] -- 0:09:59
532000 -- [-3888.071] (-3890.841) (-3889.088) (-3907.696) * [-3884.400] (-3894.014) (-3886.341) (-3883.943) -- 0:09:58
533000 -- (-3887.817) (-3901.320) (-3899.079) [-3888.933] * (-3875.566) [-3884.631] (-3889.942) (-3890.165) -- 0:09:57
534000 -- [-3883.950] (-3899.694) (-3878.939) (-3897.116) * (-3883.290) (-3895.732) [-3878.400] (-3889.115) -- 0:09:56
535000 -- (-3873.544) (-3903.501) [-3891.197] (-3894.361) * [-3888.732] (-3900.336) (-3897.192) (-3883.021) -- 0:09:54
Average standard deviation of split frequencies: 0.021010
536000 -- (-3882.203) [-3882.356] (-3881.409) (-3903.731) * (-3883.882) (-3893.784) (-3893.447) [-3879.240] -- 0:09:52
537000 -- (-3882.081) (-3897.558) [-3878.936] (-3895.444) * (-3900.605) (-3909.052) (-3898.449) [-3881.514] -- 0:09:52
538000 -- (-3898.498) [-3886.483] (-3885.053) (-3888.888) * (-3881.812) (-3894.675) [-3889.666] (-3879.333) -- 0:09:50
539000 -- [-3889.624] (-3891.612) (-3890.178) (-3889.380) * [-3880.410] (-3892.570) (-3895.950) (-3886.343) -- 0:09:49
540000 -- (-3892.278) (-3875.472) (-3888.606) [-3880.293] * (-3880.393) (-3885.811) [-3887.397] (-3915.001) -- 0:09:48
Average standard deviation of split frequencies: 0.019406
541000 -- (-3885.670) (-3894.754) [-3883.718] (-3901.089) * (-3882.972) (-3902.871) (-3900.523) [-3885.198] -- 0:09:47
542000 -- (-3891.326) (-3900.262) (-3874.070) [-3882.453] * (-3889.627) (-3884.211) [-3898.457] (-3891.688) -- 0:09:45
543000 -- (-3891.677) (-3886.391) (-3889.726) [-3893.685] * (-3897.009) [-3891.284] (-3882.762) (-3897.926) -- 0:09:44
544000 -- (-3898.475) [-3890.454] (-3883.138) (-3884.149) * (-3889.090) (-3916.201) [-3873.117] (-3892.278) -- 0:09:43
545000 -- (-3897.753) (-3900.515) (-3875.776) [-3877.956] * [-3878.359] (-3891.096) (-3891.605) (-3884.797) -- 0:09:41
Average standard deviation of split frequencies: 0.021081
546000 -- (-3887.267) [-3883.743] (-3892.124) (-3877.932) * (-3894.768) (-3893.648) (-3902.318) [-3883.402] -- 0:09:40
547000 -- (-3892.141) (-3883.807) (-3884.788) [-3879.827] * [-3887.093] (-3889.270) (-3882.559) (-3901.419) -- 0:09:39
548000 -- (-3887.624) (-3890.907) (-3892.712) [-3878.842] * (-3888.538) (-3894.353) (-3884.156) [-3900.605] -- 0:09:38
549000 -- (-3874.207) (-3883.170) (-3886.295) [-3876.307] * (-3895.686) [-3881.575] (-3874.970) (-3900.203) -- 0:09:36
550000 -- (-3892.566) (-3900.701) (-3900.074) [-3874.618] * (-3887.524) (-3881.027) [-3869.093] (-3908.056) -- 0:09:35
Average standard deviation of split frequencies: 0.020498
551000 -- (-3910.751) (-3887.628) (-3875.129) [-3873.698] * [-3883.998] (-3898.459) (-3881.608) (-3892.611) -- 0:09:34
552000 -- (-3910.880) (-3891.158) [-3890.066] (-3877.756) * (-3891.543) (-3899.130) (-3902.783) [-3885.197] -- 0:09:32
553000 -- (-3897.753) (-3904.431) (-3882.708) [-3889.709] * [-3890.417] (-3900.045) (-3903.857) (-3896.935) -- 0:09:31
554000 -- (-3902.173) (-3895.467) [-3877.962] (-3881.845) * (-3896.885) (-3897.636) [-3880.916] (-3908.074) -- 0:09:29
555000 -- [-3878.258] (-3891.546) (-3893.612) (-3881.405) * (-3904.755) (-3892.881) [-3895.103] (-3897.694) -- 0:09:29
Average standard deviation of split frequencies: 0.018464
556000 -- (-3887.198) (-3895.578) [-3882.148] (-3883.019) * [-3878.179] (-3891.737) (-3906.161) (-3891.761) -- 0:09:27
557000 -- (-3910.638) (-3888.308) (-3884.576) [-3877.565] * (-3879.405) (-3902.831) (-3892.791) [-3876.888] -- 0:09:26
558000 -- (-3899.356) (-3890.547) [-3870.243] (-3893.252) * (-3895.993) (-3892.819) [-3888.464] (-3890.184) -- 0:09:25
559000 -- (-3890.494) (-3898.631) (-3893.872) [-3871.149] * [-3885.605] (-3904.681) (-3876.015) (-3880.176) -- 0:09:24
560000 -- [-3879.105] (-3895.708) (-3921.419) (-3885.144) * [-3896.326] (-3904.752) (-3884.760) (-3909.889) -- 0:09:22
Average standard deviation of split frequencies: 0.017063
561000 -- [-3874.395] (-3877.036) (-3892.305) (-3900.115) * (-3891.525) (-3910.395) [-3888.539] (-3910.165) -- 0:09:21
562000 -- (-3879.788) (-3895.996) [-3897.309] (-3906.543) * (-3895.141) (-3899.958) [-3885.514] (-3897.434) -- 0:09:20
563000 -- (-3896.416) (-3888.913) (-3894.653) [-3882.901] * (-3897.424) (-3912.393) [-3893.726] (-3891.210) -- 0:09:18
564000 -- (-3889.783) (-3885.104) (-3899.758) [-3898.527] * (-3896.254) (-3895.205) (-3905.605) [-3892.341] -- 0:09:17
565000 -- [-3889.071] (-3889.621) (-3908.077) (-3893.789) * (-3897.629) (-3905.538) (-3881.654) [-3887.559] -- 0:09:15
Average standard deviation of split frequencies: 0.016467
566000 -- [-3877.037] (-3888.591) (-3918.205) (-3891.221) * (-3900.041) (-3905.400) [-3876.433] (-3879.142) -- 0:09:15
567000 -- [-3876.724] (-3905.329) (-3901.329) (-3892.364) * (-3887.967) (-3922.597) (-3885.353) [-3889.210] -- 0:09:13
568000 -- (-3892.943) [-3894.434] (-3899.411) (-3889.834) * (-3888.190) (-3895.259) [-3874.420] (-3889.244) -- 0:09:12
569000 -- (-3887.809) [-3887.635] (-3889.533) (-3894.337) * [-3878.963] (-3911.657) (-3888.573) (-3887.133) -- 0:09:11
570000 -- (-3870.711) [-3883.399] (-3888.094) (-3888.896) * (-3882.985) (-3888.831) (-3889.220) [-3879.546] -- 0:09:09
Average standard deviation of split frequencies: 0.016594
571000 -- [-3875.913] (-3902.154) (-3893.309) (-3879.681) * (-3891.879) (-3904.706) (-3898.971) [-3875.762] -- 0:09:08
572000 -- (-3882.174) (-3889.876) (-3890.906) [-3864.575] * (-3897.470) (-3898.466) [-3889.957] (-3875.016) -- 0:09:07
573000 -- [-3882.266] (-3890.496) (-3895.555) (-3893.088) * (-3897.780) (-3887.052) [-3875.141] (-3882.726) -- 0:09:06
574000 -- (-3893.155) (-3895.479) (-3887.077) [-3877.726] * (-3918.045) (-3897.889) (-3878.578) [-3880.698] -- 0:09:04
575000 -- (-3874.451) (-3901.176) [-3871.740] (-3883.503) * (-3899.038) (-3886.196) [-3871.968] (-3904.152) -- 0:09:03
Average standard deviation of split frequencies: 0.016657
576000 -- [-3885.519] (-3925.512) (-3885.765) (-3871.674) * (-3910.311) (-3890.870) [-3898.524] (-3898.702) -- 0:09:02
577000 -- (-3899.475) [-3892.371] (-3881.671) (-3908.419) * [-3882.922] (-3893.959) (-3874.443) (-3889.501) -- 0:09:01
578000 -- (-3895.828) (-3882.332) [-3881.158] (-3902.865) * (-3901.209) (-3901.428) [-3883.916] (-3888.928) -- 0:08:59
579000 -- (-3894.351) (-3891.938) [-3869.465] (-3891.340) * (-3885.856) (-3884.000) (-3907.157) [-3883.292] -- 0:08:58
580000 -- (-3897.565) (-3870.198) [-3876.963] (-3873.522) * (-3882.944) (-3898.610) (-3894.303) [-3881.654] -- 0:08:57
Average standard deviation of split frequencies: 0.016284
581000 -- (-3903.260) [-3883.470] (-3906.937) (-3900.649) * (-3890.676) (-3901.965) [-3887.450] (-3888.411) -- 0:08:55
582000 -- (-3900.020) (-3891.623) (-3896.418) [-3886.983] * (-3886.903) (-3905.284) (-3899.536) [-3889.395] -- 0:08:55
583000 -- (-3883.739) (-3897.121) [-3874.051] (-3880.761) * [-3887.118] (-3899.890) (-3890.522) (-3892.080) -- 0:08:53
584000 -- (-3893.792) (-3900.501) [-3885.160] (-3880.134) * (-3883.375) (-3907.710) (-3891.621) [-3889.877] -- 0:08:52
585000 -- (-3907.966) (-3883.618) [-3872.584] (-3884.494) * (-3879.481) (-3893.439) [-3875.031] (-3887.374) -- 0:08:51
Average standard deviation of split frequencies: 0.015767
586000 -- (-3890.101) [-3878.614] (-3879.965) (-3888.140) * (-3878.682) (-3887.926) [-3876.704] (-3898.427) -- 0:08:49
587000 -- (-3888.806) (-3903.457) (-3885.298) [-3879.256] * [-3875.986] (-3901.670) (-3894.322) (-3891.474) -- 0:08:48
588000 -- [-3878.516] (-3891.252) (-3879.073) (-3899.656) * (-3899.789) (-3902.928) [-3876.999] (-3886.390) -- 0:08:47
589000 -- [-3865.927] (-3880.115) (-3902.607) (-3906.975) * (-3885.777) (-3906.385) [-3870.149] (-3891.333) -- 0:08:46
590000 -- [-3881.955] (-3886.723) (-3906.811) (-3899.665) * (-3878.406) [-3883.527] (-3878.656) (-3897.345) -- 0:08:44
Average standard deviation of split frequencies: 0.015757
591000 -- (-3899.007) [-3880.637] (-3888.235) (-3885.984) * (-3916.368) (-3900.582) [-3881.485] (-3889.804) -- 0:08:43
592000 -- (-3888.145) (-3907.694) [-3884.287] (-3915.629) * (-3885.463) [-3889.211] (-3884.652) (-3898.297) -- 0:08:42
593000 -- (-3881.709) (-3892.014) [-3892.346] (-3889.259) * [-3878.730] (-3892.726) (-3893.694) (-3911.517) -- 0:08:40
594000 -- [-3886.762] (-3897.767) (-3890.110) (-3901.019) * (-3889.180) [-3877.561] (-3897.783) (-3884.885) -- 0:08:39
595000 -- (-3902.189) (-3896.248) (-3885.963) [-3888.488] * (-3895.689) (-3883.733) (-3903.513) [-3871.762] -- 0:08:37
Average standard deviation of split frequencies: 0.015909
596000 -- (-3898.559) (-3889.558) [-3885.367] (-3891.500) * (-3896.495) (-3884.179) (-3899.620) [-3873.058] -- 0:08:37
597000 -- (-3890.378) (-3905.806) (-3896.713) [-3890.960] * (-3884.196) (-3902.404) (-3893.597) [-3875.216] -- 0:08:35
598000 -- (-3883.529) (-3898.001) (-3877.879) [-3885.627] * [-3875.230] (-3894.582) (-3889.437) (-3874.142) -- 0:08:34
599000 -- [-3893.296] (-3894.101) (-3879.610) (-3889.895) * [-3883.636] (-3910.941) (-3883.580) (-3904.852) -- 0:08:33
600000 -- [-3886.030] (-3887.916) (-3902.861) (-3890.502) * (-3894.471) (-3901.993) (-3898.171) [-3888.225] -- 0:08:32
Average standard deviation of split frequencies: 0.015988
601000 -- [-3882.960] (-3891.681) (-3902.753) (-3888.386) * (-3888.448) (-3896.765) (-3883.764) [-3893.151] -- 0:08:30
602000 -- (-3889.325) (-3890.759) (-3908.703) [-3890.308] * (-3883.853) (-3904.757) (-3894.436) [-3871.460] -- 0:08:29
603000 -- (-3894.669) (-3896.419) (-3883.172) [-3873.630] * (-3889.910) (-3906.007) [-3882.536] (-3890.553) -- 0:08:28
604000 -- (-3891.662) (-3885.323) [-3889.184] (-3894.458) * [-3870.752] (-3894.236) (-3880.430) (-3882.814) -- 0:08:26
605000 -- (-3893.006) [-3889.029] (-3901.731) (-3893.878) * (-3884.118) (-3901.563) (-3889.658) [-3880.918] -- 0:08:25
Average standard deviation of split frequencies: 0.015980
606000 -- [-3869.819] (-3894.529) (-3882.512) (-3890.480) * (-3916.419) [-3890.169] (-3907.945) (-3879.081) -- 0:08:23
607000 -- [-3872.230] (-3894.237) (-3886.410) (-3879.696) * [-3885.693] (-3889.659) (-3898.724) (-3881.334) -- 0:08:23
608000 -- [-3883.182] (-3891.379) (-3893.630) (-3894.748) * [-3884.797] (-3884.809) (-3902.146) (-3893.389) -- 0:08:21
609000 -- (-3889.923) [-3883.695] (-3874.838) (-3891.541) * [-3886.314] (-3884.493) (-3884.538) (-3883.684) -- 0:08:20
610000 -- (-3885.109) (-3879.182) [-3886.219] (-3903.049) * (-3915.720) [-3896.401] (-3885.584) (-3879.981) -- 0:08:19
Average standard deviation of split frequencies: 0.016801
611000 -- [-3881.491] (-3893.127) (-3898.196) (-3895.265) * (-3886.928) (-3907.487) (-3886.153) [-3883.812] -- 0:08:17
612000 -- [-3894.769] (-3887.693) (-3893.667) (-3884.685) * (-3898.729) (-3877.611) (-3904.987) [-3892.093] -- 0:08:16
613000 -- (-3893.907) [-3886.931] (-3889.574) (-3889.272) * [-3877.136] (-3897.212) (-3881.423) (-3881.719) -- 0:08:15
614000 -- (-3884.534) [-3874.042] (-3887.158) (-3898.070) * (-3890.096) (-3903.297) (-3889.034) [-3883.482] -- 0:08:14
615000 -- (-3873.633) (-3894.571) (-3894.218) [-3886.028] * (-3882.701) (-3903.683) [-3890.771] (-3891.485) -- 0:08:12
Average standard deviation of split frequencies: 0.016588
616000 -- (-3899.074) [-3886.018] (-3892.954) (-3882.121) * [-3874.898] (-3901.423) (-3882.476) (-3892.338) -- 0:08:11
617000 -- (-3902.590) (-3896.340) [-3887.769] (-3870.451) * [-3888.192] (-3914.516) (-3886.924) (-3884.948) -- 0:08:10
618000 -- (-3906.489) (-3895.205) (-3882.925) [-3885.009] * [-3884.450] (-3902.173) (-3895.036) (-3884.390) -- 0:08:08
619000 -- [-3889.117] (-3912.474) (-3880.235) (-3875.924) * (-3884.393) (-3902.458) (-3891.910) [-3887.716] -- 0:08:07
620000 -- (-3888.669) (-3906.511) [-3883.102] (-3898.733) * [-3880.755] (-3892.939) (-3891.849) (-3890.740) -- 0:08:06
Average standard deviation of split frequencies: 0.016218
621000 -- (-3881.948) (-3887.270) (-3895.659) [-3881.192] * (-3880.181) [-3885.562] (-3905.541) (-3924.011) -- 0:08:05
622000 -- (-3889.928) (-3893.388) (-3889.965) [-3882.793] * (-3877.327) (-3896.994) (-3902.376) [-3890.557] -- 0:08:03
623000 -- (-3895.674) (-3894.208) (-3895.225) [-3869.497] * (-3903.189) (-3901.459) (-3876.200) [-3871.722] -- 0:08:02
624000 -- (-3915.068) (-3900.035) [-3875.174] (-3885.917) * (-3901.911) (-3902.678) (-3892.388) [-3879.856] -- 0:08:01
625000 -- [-3882.822] (-3891.029) (-3887.217) (-3886.800) * (-3894.588) (-3900.023) (-3905.261) [-3879.818] -- 0:08:00
Average standard deviation of split frequencies: 0.016235
626000 -- (-3890.590) (-3892.326) [-3884.811] (-3908.778) * (-3895.919) (-3870.189) (-3899.588) [-3867.001] -- 0:07:58
627000 -- (-3907.012) (-3892.093) [-3873.955] (-3886.810) * (-3901.414) (-3898.771) [-3893.946] (-3876.854) -- 0:07:57
628000 -- (-3903.271) (-3884.732) [-3882.360] (-3886.525) * (-3893.186) (-3901.830) (-3886.383) [-3880.454] -- 0:07:56
629000 -- (-3886.251) [-3889.900] (-3895.321) (-3911.534) * (-3891.916) (-3891.375) (-3902.772) [-3873.849] -- 0:07:54
630000 -- (-3875.526) [-3882.885] (-3900.038) (-3907.723) * [-3904.431] (-3921.990) (-3911.806) (-3890.673) -- 0:07:53
Average standard deviation of split frequencies: 0.016312
631000 -- [-3880.222] (-3888.218) (-3898.042) (-3890.245) * [-3882.670] (-3918.405) (-3887.520) (-3876.653) -- 0:07:51
632000 -- (-3907.707) [-3889.239] (-3887.220) (-3885.747) * (-3904.689) (-3904.294) (-3895.362) [-3881.215] -- 0:07:51
633000 -- (-3902.099) [-3888.156] (-3890.639) (-3888.095) * (-3888.801) (-3888.358) [-3869.364] (-3896.742) -- 0:07:49
634000 -- (-3890.290) (-3893.006) (-3901.830) [-3889.943] * (-3881.577) (-3895.646) (-3876.220) [-3889.178] -- 0:07:48
635000 -- (-3882.827) (-3902.505) (-3885.923) [-3891.920] * [-3890.164] (-3888.254) (-3885.779) (-3886.802) -- 0:07:46
Average standard deviation of split frequencies: 0.016263
636000 -- (-3881.088) (-3882.870) [-3881.813] (-3883.665) * [-3879.893] (-3896.138) (-3885.611) (-3885.494) -- 0:07:45
637000 -- (-3894.964) (-3884.618) (-3877.570) [-3887.190] * [-3876.565] (-3914.488) (-3885.620) (-3884.519) -- 0:07:44
638000 -- (-3890.453) [-3876.055] (-3895.841) (-3884.351) * (-3890.576) (-3890.612) (-3894.973) [-3885.145] -- 0:07:43
639000 -- (-3894.061) [-3883.490] (-3900.323) (-3898.807) * (-3889.089) (-3895.197) [-3883.937] (-3896.938) -- 0:07:42
640000 -- [-3875.239] (-3885.376) (-3881.473) (-3916.076) * (-3890.002) (-3913.866) (-3896.805) [-3878.991] -- 0:07:40
Average standard deviation of split frequencies: 0.016361
641000 -- [-3874.218] (-3890.662) (-3883.923) (-3896.156) * (-3890.904) (-3901.379) [-3878.675] (-3876.772) -- 0:07:39
642000 -- [-3882.782] (-3875.762) (-3894.475) (-3889.632) * (-3892.693) [-3873.863] (-3905.493) (-3901.438) -- 0:07:38
643000 -- (-3897.474) (-3881.997) (-3892.953) [-3881.088] * (-3897.929) (-3887.972) (-3896.055) [-3886.788] -- 0:07:36
644000 -- (-3881.076) [-3884.014] (-3879.058) (-3893.398) * [-3876.902] (-3904.511) (-3892.832) (-3868.858) -- 0:07:35
645000 -- (-3895.300) (-3885.490) (-3890.193) [-3874.134] * [-3877.746] (-3889.608) (-3896.304) (-3890.138) -- 0:07:34
Average standard deviation of split frequencies: 0.019541
646000 -- (-3896.041) (-3891.566) (-3884.346) [-3894.756] * [-3875.098] (-3890.413) (-3880.216) (-3883.036) -- 0:07:33
647000 -- (-3875.550) [-3874.540] (-3883.940) (-3917.076) * (-3890.452) (-3893.537) [-3882.474] (-3889.683) -- 0:07:31
648000 -- (-3892.137) [-3880.614] (-3892.954) (-3886.158) * (-3895.795) (-3880.282) (-3893.575) [-3872.803] -- 0:07:30
649000 -- (-3888.484) (-3900.350) (-3882.519) [-3881.420] * (-3903.832) (-3887.880) (-3896.243) [-3882.679] -- 0:07:29
650000 -- (-3897.375) (-3891.146) (-3886.412) [-3871.867] * (-3899.067) (-3892.684) (-3890.232) [-3889.666] -- 0:07:28
Average standard deviation of split frequencies: 0.017740
651000 -- (-3902.681) (-3903.724) (-3909.217) [-3874.335] * (-3896.120) (-3879.288) [-3884.272] (-3887.264) -- 0:07:26
652000 -- [-3878.594] (-3887.660) (-3887.998) (-3894.010) * [-3893.543] (-3897.277) (-3890.153) (-3886.337) -- 0:07:25
653000 -- (-3879.214) [-3871.662] (-3899.340) (-3902.441) * (-3888.216) (-3906.019) (-3877.943) [-3880.401] -- 0:07:24
654000 -- (-3903.662) (-3908.570) (-3894.009) [-3885.468] * (-3892.821) (-3887.470) (-3897.983) [-3877.831] -- 0:07:22
655000 -- (-3902.346) (-3893.895) [-3880.888] (-3887.672) * (-3901.114) (-3895.244) (-3875.812) [-3883.197] -- 0:07:21
Average standard deviation of split frequencies: 0.015501
656000 -- (-3886.874) (-3867.133) (-3882.127) [-3877.216] * (-3883.269) (-3899.781) (-3887.379) [-3881.269] -- 0:07:19
657000 -- (-3888.382) [-3879.954] (-3880.806) (-3886.428) * [-3880.005] (-3901.242) (-3894.536) (-3876.611) -- 0:07:19
658000 -- (-3879.305) [-3883.784] (-3905.456) (-3880.236) * (-3900.709) (-3892.166) (-3885.191) [-3888.039] -- 0:07:17
659000 -- (-3892.767) [-3893.335] (-3897.984) (-3880.797) * (-3890.927) [-3878.757] (-3910.821) (-3880.645) -- 0:07:16
660000 -- (-3918.745) (-3886.478) (-3886.463) [-3873.498] * (-3882.931) (-3884.019) (-3905.328) [-3887.973] -- 0:07:15
Average standard deviation of split frequencies: 0.015970
661000 -- (-3885.590) [-3885.046] (-3885.099) (-3877.477) * (-3888.732) (-3918.800) (-3896.927) [-3891.624] -- 0:07:13
662000 -- [-3874.675] (-3888.790) (-3887.141) (-3903.776) * (-3901.514) (-3888.415) [-3881.981] (-3889.580) -- 0:07:12
663000 -- (-3886.599) (-3889.977) [-3874.678] (-3902.805) * [-3900.401] (-3896.775) (-3890.616) (-3891.188) -- 0:07:11
664000 -- [-3887.997] (-3899.895) (-3876.136) (-3914.049) * (-3898.156) (-3899.161) [-3883.825] (-3892.549) -- 0:07:10
665000 -- (-3902.704) [-3882.146] (-3886.335) (-3879.541) * (-3909.972) (-3897.121) (-3883.130) [-3892.757] -- 0:07:08
Average standard deviation of split frequencies: 0.015801
666000 -- (-3878.406) (-3904.858) (-3897.715) [-3885.696] * (-3892.112) (-3889.812) (-3888.003) [-3894.774] -- 0:07:07
667000 -- [-3888.412] (-3892.205) (-3909.645) (-3890.992) * (-3903.963) (-3902.952) [-3896.786] (-3890.124) -- 0:07:06
668000 -- (-3900.474) (-3899.122) (-3903.494) [-3895.140] * (-3894.771) (-3886.643) [-3886.003] (-3895.797) -- 0:07:04
669000 -- (-3889.263) [-3882.188] (-3894.641) (-3894.472) * (-3893.621) (-3891.600) (-3881.082) [-3883.707] -- 0:07:03
670000 -- (-3892.587) (-3897.861) (-3891.205) [-3895.359] * (-3893.896) (-3890.901) [-3877.097] (-3893.563) -- 0:07:02
Average standard deviation of split frequencies: 0.015526
671000 -- (-3898.892) [-3882.309] (-3882.625) (-3912.389) * [-3876.971] (-3878.444) (-3896.515) (-3914.471) -- 0:07:01
672000 -- [-3893.486] (-3899.120) (-3893.752) (-3898.511) * [-3891.950] (-3895.712) (-3893.533) (-3898.084) -- 0:06:59
673000 -- (-3901.589) (-3893.733) (-3902.743) [-3882.803] * (-3896.217) (-3901.122) [-3880.893] (-3887.153) -- 0:06:58
674000 -- [-3883.077] (-3883.870) (-3900.486) (-3894.680) * [-3881.207] (-3882.285) (-3877.934) (-3906.012) -- 0:06:57
675000 -- (-3899.518) [-3889.615] (-3894.480) (-3891.610) * (-3886.146) (-3908.582) [-3864.615] (-3892.004) -- 0:06:56
Average standard deviation of split frequencies: 0.014972
676000 -- (-3910.743) (-3906.433) (-3902.964) [-3895.204] * (-3885.492) (-3925.745) [-3870.363] (-3890.304) -- 0:06:54
677000 -- (-3904.079) (-3904.714) (-3884.179) [-3877.519] * (-3889.279) (-3899.905) [-3882.188] (-3896.333) -- 0:06:53
678000 -- [-3879.492] (-3892.878) (-3914.464) (-3881.350) * [-3878.329] (-3908.768) (-3898.303) (-3881.031) -- 0:06:52
679000 -- (-3891.297) [-3897.842] (-3891.340) (-3899.660) * (-3873.535) (-3889.948) [-3892.642] (-3896.862) -- 0:06:50
680000 -- (-3886.591) (-3895.812) (-3895.347) [-3881.670] * [-3880.738] (-3898.312) (-3897.186) (-3898.827) -- 0:06:49
Average standard deviation of split frequencies: 0.015094
681000 -- (-3896.152) [-3890.381] (-3893.880) (-3877.133) * (-3885.423) (-3894.073) [-3882.223] (-3912.452) -- 0:06:48
682000 -- (-3878.633) (-3890.266) (-3882.440) [-3883.001] * [-3877.270] (-3898.069) (-3884.342) (-3884.682) -- 0:06:47
683000 -- (-3890.767) [-3879.905] (-3880.302) (-3882.606) * (-3900.287) (-3921.179) [-3888.249] (-3899.182) -- 0:06:45
684000 -- (-3898.070) (-3890.861) (-3886.903) [-3887.603] * [-3885.148] (-3916.531) (-3890.579) (-3900.364) -- 0:06:44
685000 -- (-3895.609) (-3909.872) [-3897.872] (-3875.841) * (-3886.378) (-3932.427) (-3882.137) [-3891.278] -- 0:06:43
Average standard deviation of split frequencies: 0.015057
686000 -- (-3899.435) (-3895.393) (-3891.429) [-3879.231] * (-3878.942) (-3914.897) (-3895.295) [-3889.665] -- 0:06:41
687000 -- (-3885.591) (-3886.858) (-3894.722) [-3880.963] * [-3879.831] (-3901.949) (-3887.010) (-3883.101) -- 0:06:40
688000 -- (-3884.343) (-3891.800) [-3898.367] (-3887.178) * (-3883.510) [-3901.169] (-3882.683) (-3894.982) -- 0:06:39
689000 -- (-3909.868) (-3889.137) (-3896.355) [-3875.300] * (-3889.179) (-3893.252) [-3881.135] (-3907.117) -- 0:06:38
690000 -- (-3900.108) (-3899.393) (-3894.206) [-3876.758] * (-3893.581) [-3888.340] (-3887.877) (-3902.698) -- 0:06:36
Average standard deviation of split frequencies: 0.015337
691000 -- (-3894.302) (-3887.191) [-3893.226] (-3886.538) * (-3884.948) [-3885.679] (-3903.280) (-3895.724) -- 0:06:35
692000 -- (-3909.338) (-3881.197) (-3892.149) [-3870.094] * [-3875.802] (-3897.847) (-3885.655) (-3889.832) -- 0:06:33
693000 -- (-3887.193) [-3877.569] (-3894.044) (-3879.100) * (-3907.030) [-3888.008] (-3897.203) (-3906.478) -- 0:06:32
694000 -- [-3882.894] (-3881.825) (-3887.696) (-3886.991) * (-3894.168) (-3900.466) (-3892.377) [-3879.442] -- 0:06:31
695000 -- [-3884.119] (-3894.496) (-3876.646) (-3901.773) * (-3889.086) [-3883.120] (-3900.517) (-3888.318) -- 0:06:30
Average standard deviation of split frequencies: 0.015299
696000 -- (-3891.830) (-3887.895) [-3878.473] (-3886.079) * (-3890.235) (-3882.067) [-3880.468] (-3889.015) -- 0:06:28
697000 -- (-3879.711) [-3882.335] (-3888.497) (-3888.308) * (-3883.854) (-3890.265) (-3888.846) [-3882.223] -- 0:06:27
698000 -- (-3886.785) [-3893.201] (-3898.403) (-3903.820) * (-3881.045) (-3898.142) [-3883.314] (-3900.836) -- 0:06:26
699000 -- (-3886.240) (-3894.697) (-3887.705) [-3887.259] * (-3880.074) (-3892.587) (-3884.941) [-3882.594] -- 0:06:24
700000 -- (-3899.448) (-3895.919) [-3889.959] (-3900.859) * [-3883.448] (-3903.347) (-3899.665) (-3885.123) -- 0:06:24
Average standard deviation of split frequencies: 0.014940
701000 -- (-3890.183) (-3896.949) [-3888.134] (-3882.719) * (-3884.680) (-3915.177) (-3890.507) [-3883.042] -- 0:06:22
702000 -- (-3906.840) (-3873.305) [-3873.623] (-3901.654) * [-3883.007] (-3890.707) (-3912.549) (-3895.921) -- 0:06:21
703000 -- [-3888.281] (-3882.555) (-3890.903) (-3891.061) * (-3895.392) (-3900.373) (-3900.131) [-3901.987] -- 0:06:19
704000 -- (-3891.093) (-3893.217) [-3892.577] (-3893.929) * [-3875.759] (-3899.169) (-3896.309) (-3900.438) -- 0:06:18
705000 -- (-3884.716) [-3878.271] (-3891.312) (-3893.987) * [-3875.421] (-3888.867) (-3899.641) (-3899.536) -- 0:06:17
Average standard deviation of split frequencies: 0.014709
706000 -- (-3895.797) [-3884.325] (-3884.973) (-3904.367) * [-3890.673] (-3917.568) (-3882.427) (-3896.915) -- 0:06:16
707000 -- (-3894.810) (-3899.359) [-3877.189] (-3881.866) * (-3889.157) (-3886.100) (-3895.805) [-3882.950] -- 0:06:15
708000 -- (-3880.021) (-3895.393) (-3885.370) [-3877.659] * (-3917.556) (-3887.648) [-3876.866] (-3880.066) -- 0:06:13
709000 -- [-3883.299] (-3888.905) (-3893.986) (-3875.441) * (-3904.771) (-3891.528) (-3873.485) [-3875.797] -- 0:06:12
710000 -- (-3889.279) (-3904.768) (-3890.036) [-3870.502] * (-3912.767) (-3893.631) [-3890.530] (-3875.005) -- 0:06:11
Average standard deviation of split frequencies: 0.014915
711000 -- [-3878.245] (-3897.583) (-3882.819) (-3881.930) * (-3890.088) (-3907.096) [-3874.909] (-3886.360) -- 0:06:09
712000 -- [-3870.170] (-3890.329) (-3901.376) (-3885.571) * (-3891.369) (-3900.948) [-3877.624] (-3892.888) -- 0:06:08
713000 -- (-3880.746) [-3897.858] (-3900.241) (-3900.751) * (-3908.401) (-3892.216) [-3877.927] (-3884.829) -- 0:06:07
714000 -- [-3886.098] (-3886.996) (-3887.793) (-3889.934) * (-3904.324) (-3897.276) [-3885.040] (-3896.020) -- 0:06:06
715000 -- (-3882.238) [-3883.495] (-3887.444) (-3884.389) * (-3893.331) (-3890.634) [-3878.791] (-3902.620) -- 0:06:04
Average standard deviation of split frequencies: 0.014736
716000 -- (-3876.511) (-3903.829) [-3881.264] (-3885.216) * (-3889.582) (-3885.652) (-3901.197) [-3882.738] -- 0:06:03
717000 -- (-3909.419) [-3882.234] (-3890.178) (-3890.103) * (-3900.157) (-3897.067) [-3885.846] (-3880.704) -- 0:06:02
718000 -- (-3894.514) (-3894.296) [-3879.724] (-3892.008) * (-3892.402) (-3902.603) (-3892.022) [-3897.585] -- 0:06:00
719000 -- [-3873.806] (-3884.102) (-3893.546) (-3899.196) * (-3888.869) [-3884.066] (-3884.321) (-3901.158) -- 0:05:59
720000 -- [-3878.531] (-3888.103) (-3883.847) (-3893.042) * (-3890.990) [-3888.886] (-3887.836) (-3908.744) -- 0:05:58
Average standard deviation of split frequencies: 0.014564
721000 -- [-3877.263] (-3886.685) (-3883.725) (-3893.457) * [-3875.171] (-3907.443) (-3894.989) (-3891.638) -- 0:05:57
722000 -- [-3879.226] (-3899.472) (-3890.035) (-3892.103) * [-3882.454] (-3901.853) (-3894.869) (-3888.164) -- 0:05:55
723000 -- [-3885.692] (-3893.277) (-3884.551) (-3901.305) * (-3917.968) (-3889.426) (-3896.947) [-3886.275] -- 0:05:54
724000 -- (-3890.783) [-3889.056] (-3900.259) (-3900.995) * (-3910.139) (-3896.972) (-3898.101) [-3883.983] -- 0:05:53
725000 -- [-3876.672] (-3881.484) (-3908.801) (-3877.258) * (-3894.678) (-3911.614) [-3884.590] (-3893.992) -- 0:05:52
Average standard deviation of split frequencies: 0.014304
726000 -- (-3899.367) [-3884.188] (-3883.019) (-3887.495) * [-3883.359] (-3913.035) (-3883.383) (-3896.473) -- 0:05:50
727000 -- (-3897.901) (-3884.544) [-3871.345] (-3886.587) * (-3888.561) (-3891.070) [-3888.874] (-3913.754) -- 0:05:49
728000 -- (-3909.596) (-3887.111) (-3874.453) [-3880.553] * (-3899.746) (-3891.818) [-3899.549] (-3882.994) -- 0:05:48
729000 -- (-3913.941) [-3876.213] (-3889.137) (-3888.286) * (-3896.468) (-3878.272) [-3880.679] (-3892.903) -- 0:05:46
730000 -- (-3893.743) (-3891.479) [-3898.383] (-3885.825) * (-3917.177) (-3885.231) (-3875.286) [-3871.882] -- 0:05:45
Average standard deviation of split frequencies: 0.014611
731000 -- (-3903.468) (-3880.513) (-3878.081) [-3887.406] * (-3899.590) (-3891.701) (-3885.544) [-3878.774] -- 0:05:44
732000 -- (-3903.149) [-3881.601] (-3886.097) (-3881.081) * (-3890.156) (-3893.168) (-3890.716) [-3882.037] -- 0:05:43
733000 -- (-3886.463) (-3882.463) (-3898.591) [-3876.083] * [-3886.446] (-3891.250) (-3894.403) (-3903.351) -- 0:05:41
734000 -- (-3899.087) (-3888.042) [-3885.505] (-3875.243) * (-3881.677) (-3911.710) [-3882.908] (-3879.053) -- 0:05:40
735000 -- (-3901.885) (-3881.512) (-3885.908) [-3886.516] * (-3891.767) (-3899.189) [-3877.562] (-3883.779) -- 0:05:38
Average standard deviation of split frequencies: 0.014411
736000 -- (-3885.939) [-3880.598] (-3888.395) (-3896.898) * [-3868.663] (-3892.789) (-3904.870) (-3880.881) -- 0:05:37
737000 -- (-3890.525) (-3882.690) [-3870.413] (-3890.159) * [-3890.571] (-3901.514) (-3893.689) (-3896.286) -- 0:05:36
738000 -- (-3881.637) (-3902.525) [-3887.311] (-3895.268) * (-3889.376) (-3905.482) (-3886.014) [-3883.158] -- 0:05:35
739000 -- [-3884.803] (-3889.629) (-3875.144) (-3891.168) * (-3894.569) (-3897.259) (-3878.267) [-3896.376] -- 0:05:34
740000 -- (-3895.208) (-3898.090) [-3886.967] (-3893.994) * [-3876.092] (-3910.431) (-3877.470) (-3881.195) -- 0:05:32
Average standard deviation of split frequencies: 0.014189
741000 -- (-3904.811) [-3877.946] (-3883.504) (-3892.362) * (-3880.773) (-3891.768) [-3880.167] (-3883.154) -- 0:05:31
742000 -- (-3907.718) (-3879.410) [-3881.943] (-3896.614) * (-3876.427) [-3893.614] (-3895.104) (-3886.477) -- 0:05:29
743000 -- (-3894.259) (-3888.237) (-3895.486) [-3883.485] * (-3894.376) (-3895.254) (-3907.206) [-3885.773] -- 0:05:28
744000 -- (-3886.520) (-3903.683) (-3899.509) [-3884.496] * (-3896.724) (-3900.149) (-3886.657) [-3886.290] -- 0:05:27
745000 -- (-3892.928) (-3888.400) (-3899.966) [-3890.015] * [-3884.864] (-3916.760) (-3884.723) (-3886.139) -- 0:05:26
Average standard deviation of split frequencies: 0.014199
746000 -- [-3888.740] (-3887.187) (-3882.135) (-3896.119) * (-3881.076) (-3887.350) (-3891.879) [-3887.092] -- 0:05:24
747000 -- [-3879.260] (-3887.364) (-3889.987) (-3890.838) * (-3890.528) (-3884.912) (-3872.208) [-3883.195] -- 0:05:23
748000 -- (-3898.037) (-3883.756) (-3873.671) [-3900.869] * (-3884.268) (-3904.868) [-3877.070] (-3895.011) -- 0:05:22
749000 -- (-3893.049) (-3893.817) (-3891.635) [-3892.735] * (-3888.638) (-3901.020) [-3877.268] (-3893.793) -- 0:05:21
750000 -- (-3899.773) [-3880.663] (-3889.040) (-3893.427) * (-3875.875) (-3897.112) (-3887.262) [-3881.267] -- 0:05:19
Average standard deviation of split frequencies: 0.013963
751000 -- (-3883.831) [-3881.446] (-3895.271) (-3891.055) * [-3890.778] (-3906.588) (-3884.315) (-3895.571) -- 0:05:18
752000 -- (-3892.566) [-3878.076] (-3890.560) (-3885.495) * [-3871.201] (-3894.119) (-3890.457) (-3894.278) -- 0:05:17
753000 -- (-3908.799) (-3887.002) [-3873.862] (-3899.305) * [-3878.875] (-3886.178) (-3883.232) (-3875.281) -- 0:05:15
754000 -- [-3880.538] (-3885.501) (-3891.534) (-3890.838) * [-3886.497] (-3893.894) (-3901.879) (-3876.721) -- 0:05:14
755000 -- (-3884.016) [-3877.360] (-3885.625) (-3891.109) * (-3875.320) (-3889.126) (-3891.135) [-3883.474] -- 0:05:13
Average standard deviation of split frequencies: 0.013755
756000 -- (-3892.561) (-3883.581) (-3889.174) [-3903.550] * [-3879.019] (-3888.965) (-3893.093) (-3894.447) -- 0:05:12
757000 -- (-3882.789) (-3881.246) [-3896.700] (-3915.974) * (-3872.557) [-3891.967] (-3889.887) (-3889.038) -- 0:05:10
758000 -- (-3887.178) [-3876.344] (-3880.862) (-3902.979) * (-3902.429) (-3909.480) [-3872.866] (-3898.370) -- 0:05:09
759000 -- (-3887.460) (-3888.880) (-3875.381) [-3891.733] * [-3881.004] (-3894.628) (-3886.571) (-3902.664) -- 0:05:08
760000 -- (-3904.254) [-3884.031] (-3877.507) (-3880.355) * [-3892.367] (-3909.663) (-3892.634) (-3917.438) -- 0:05:06
Average standard deviation of split frequencies: 0.013798
761000 -- (-3895.382) (-3890.672) [-3885.536] (-3891.574) * (-3895.422) (-3902.532) [-3882.729] (-3892.238) -- 0:05:05
762000 -- (-3885.685) [-3892.962] (-3885.262) (-3902.405) * (-3901.328) (-3893.291) [-3882.356] (-3890.299) -- 0:05:04
763000 -- (-3894.457) (-3894.735) (-3903.217) [-3889.545] * [-3880.840] (-3888.523) (-3870.923) (-3898.729) -- 0:05:03
764000 -- [-3873.309] (-3900.543) (-3897.915) (-3874.869) * (-3900.511) (-3897.965) (-3883.415) [-3884.135] -- 0:05:01
765000 -- (-3890.384) (-3887.102) [-3873.061] (-3897.050) * (-3896.113) (-3898.010) [-3891.204] (-3884.674) -- 0:05:00
Average standard deviation of split frequencies: 0.013738
766000 -- [-3893.946] (-3900.428) (-3884.654) (-3894.212) * (-3896.011) (-3908.605) (-3883.981) [-3878.852] -- 0:04:59
767000 -- (-3913.417) (-3880.230) [-3876.265] (-3911.570) * (-3887.167) (-3901.773) (-3898.136) [-3873.710] -- 0:04:58
768000 -- (-3887.521) (-3894.815) [-3886.849] (-3906.249) * [-3880.545] (-3908.306) (-3880.981) (-3883.940) -- 0:04:56
769000 -- (-3882.531) (-3897.484) [-3883.943] (-3884.195) * [-3874.577] (-3910.567) (-3902.734) (-3888.037) -- 0:04:55
770000 -- (-3895.045) [-3879.340] (-3914.296) (-3889.125) * [-3885.954] (-3896.498) (-3903.135) (-3899.973) -- 0:04:54
Average standard deviation of split frequencies: 0.013601
771000 -- (-3909.125) (-3897.567) (-3895.694) [-3882.233] * (-3888.838) [-3880.243] (-3892.717) (-3883.161) -- 0:04:52
772000 -- (-3907.482) (-3888.550) [-3889.492] (-3874.254) * (-3889.095) (-3894.810) (-3896.349) [-3869.856] -- 0:04:51
773000 -- [-3887.289] (-3896.820) (-3885.803) (-3892.339) * (-3888.072) (-3912.355) (-3908.539) [-3871.516] -- 0:04:50
774000 -- (-3887.609) (-3881.651) (-3880.952) [-3891.579] * [-3881.629] (-3912.660) (-3887.952) (-3875.751) -- 0:04:49
775000 -- (-3891.472) (-3893.069) (-3897.103) [-3890.269] * [-3882.358] (-3896.506) (-3869.480) (-3889.307) -- 0:04:47
Average standard deviation of split frequencies: 0.014097
776000 -- (-3893.413) (-3893.633) [-3880.178] (-3888.368) * [-3880.609] (-3901.336) (-3891.568) (-3901.200) -- 0:04:46
777000 -- (-3902.616) (-3887.228) [-3883.002] (-3898.489) * [-3875.251] (-3890.764) (-3912.860) (-3893.139) -- 0:04:44
778000 -- (-3902.704) [-3890.066] (-3888.173) (-3908.413) * [-3876.888] (-3894.423) (-3901.928) (-3901.447) -- 0:04:43
779000 -- [-3880.445] (-3888.283) (-3904.010) (-3893.475) * (-3887.681) (-3893.715) (-3891.950) [-3876.245] -- 0:04:42
780000 -- (-3893.335) [-3892.988] (-3897.811) (-3886.809) * [-3875.515] (-3904.605) (-3884.496) (-3876.167) -- 0:04:41
Average standard deviation of split frequencies: 0.014013
781000 -- (-3894.803) [-3890.123] (-3885.313) (-3897.958) * (-3888.567) [-3891.547] (-3895.509) (-3884.662) -- 0:04:40
782000 -- (-3880.772) [-3877.522] (-3916.740) (-3886.485) * [-3879.088] (-3900.198) (-3898.484) (-3885.443) -- 0:04:38
783000 -- (-3893.660) (-3888.449) (-3886.052) [-3894.293] * [-3886.709] (-3904.295) (-3895.792) (-3891.333) -- 0:04:37
784000 -- [-3887.864] (-3896.660) (-3895.806) (-3880.570) * [-3878.517] (-3906.877) (-3906.389) (-3889.125) -- 0:04:36
785000 -- (-3898.873) (-3888.646) (-3892.449) [-3887.070] * [-3873.125] (-3892.594) (-3903.141) (-3896.829) -- 0:04:34
Average standard deviation of split frequencies: 0.014218
786000 -- (-3897.795) [-3879.342] (-3885.703) (-3883.149) * [-3884.032] (-3903.122) (-3894.899) (-3878.802) -- 0:04:33
787000 -- [-3875.714] (-3887.623) (-3888.517) (-3888.878) * [-3879.390] (-3884.758) (-3889.921) (-3882.510) -- 0:04:32
788000 -- (-3886.697) (-3890.590) [-3880.766] (-3881.605) * [-3885.301] (-3912.550) (-3893.628) (-3891.676) -- 0:04:30
789000 -- [-3891.982] (-3889.571) (-3897.525) (-3893.526) * [-3889.223] (-3903.741) (-3884.107) (-3898.731) -- 0:04:29
790000 -- (-3894.948) [-3888.265] (-3895.538) (-3889.613) * [-3878.863] (-3895.232) (-3892.611) (-3880.080) -- 0:04:28
Average standard deviation of split frequencies: 0.013853
791000 -- [-3890.051] (-3889.573) (-3871.367) (-3896.793) * (-3882.897) (-3903.036) [-3883.022] (-3900.841) -- 0:04:27
792000 -- [-3885.385] (-3883.125) (-3886.599) (-3892.943) * (-3885.900) (-3908.172) [-3866.527] (-3890.165) -- 0:04:26
793000 -- [-3887.404] (-3887.794) (-3909.269) (-3904.078) * (-3908.454) (-3908.890) (-3886.917) [-3882.785] -- 0:04:24
794000 -- (-3893.072) (-3904.406) [-3870.224] (-3895.426) * (-3882.874) (-3916.704) [-3876.460] (-3888.219) -- 0:04:23
795000 -- (-3886.543) (-3896.939) (-3909.732) [-3883.787] * (-3873.045) (-3905.820) (-3907.365) [-3879.625] -- 0:04:21
Average standard deviation of split frequencies: 0.013830
796000 -- [-3887.124] (-3886.728) (-3901.868) (-3887.723) * (-3877.428) (-3888.442) [-3883.713] (-3886.889) -- 0:04:20
797000 -- [-3887.388] (-3898.147) (-3891.362) (-3885.087) * [-3876.715] (-3893.815) (-3879.902) (-3909.491) -- 0:04:19
798000 -- (-3880.178) [-3877.250] (-3905.538) (-3906.529) * (-3885.457) (-3913.456) [-3892.737] (-3889.993) -- 0:04:18
799000 -- [-3876.406] (-3886.373) (-3902.417) (-3906.918) * [-3881.997] (-3901.980) (-3884.898) (-3887.242) -- 0:04:17
800000 -- (-3875.848) [-3884.572] (-3899.799) (-3907.944) * (-3888.103) (-3914.784) [-3868.189] (-3891.764) -- 0:04:15
Average standard deviation of split frequencies: 0.013525
801000 -- (-3881.637) (-3915.672) [-3889.194] (-3894.748) * (-3886.712) (-3912.961) [-3879.400] (-3902.734) -- 0:04:14
802000 -- [-3874.149] (-3884.748) (-3902.363) (-3888.258) * (-3895.909) (-3902.905) (-3873.223) [-3877.331] -- 0:04:13
803000 -- (-3889.897) (-3881.262) (-3897.116) [-3892.609] * (-3895.588) (-3883.536) [-3866.755] (-3884.108) -- 0:04:11
804000 -- [-3886.116] (-3902.146) (-3903.542) (-3890.189) * (-3883.290) (-3899.005) (-3881.239) [-3877.401] -- 0:04:10
805000 -- [-3885.140] (-3904.097) (-3880.559) (-3898.254) * [-3892.638] (-3895.398) (-3896.681) (-3888.285) -- 0:04:09
Average standard deviation of split frequencies: 0.013201
806000 -- (-3888.176) (-3910.394) [-3892.339] (-3902.081) * [-3881.687] (-3894.403) (-3891.327) (-3892.128) -- 0:04:08
807000 -- [-3874.706] (-3885.540) (-3887.019) (-3898.632) * (-3907.173) (-3900.676) (-3888.527) [-3884.694] -- 0:04:06
808000 -- (-3894.459) (-3883.326) [-3880.511] (-3902.495) * (-3886.823) (-3896.566) (-3887.911) [-3882.926] -- 0:04:05
809000 -- (-3890.735) (-3906.301) (-3885.009) [-3884.065] * (-3875.065) (-3900.777) (-3891.662) [-3893.011] -- 0:04:04
810000 -- (-3906.299) (-3900.371) (-3887.801) [-3870.205] * [-3881.417] (-3899.561) (-3886.468) (-3908.564) -- 0:04:03
Average standard deviation of split frequencies: 0.013026
811000 -- (-3887.928) [-3885.220] (-3902.322) (-3878.221) * (-3905.819) (-3902.311) (-3877.133) [-3886.630] -- 0:04:01
812000 -- (-3900.796) [-3878.041] (-3908.692) (-3879.637) * (-3887.893) (-3898.384) [-3887.507] (-3896.505) -- 0:04:00
813000 -- (-3891.925) (-3895.238) (-3888.237) [-3881.554] * [-3885.344] (-3889.387) (-3893.927) (-3892.699) -- 0:03:59
814000 -- (-3870.334) (-3891.668) [-3889.318] (-3884.673) * [-3884.417] (-3905.672) (-3885.072) (-3901.396) -- 0:03:57
815000 -- [-3870.305] (-3895.900) (-3903.517) (-3902.898) * (-3895.823) (-3902.587) (-3889.242) [-3877.292] -- 0:03:56
Average standard deviation of split frequencies: 0.013221
816000 -- [-3885.214] (-3892.789) (-3900.826) (-3877.601) * (-3885.539) (-3891.716) (-3892.135) [-3877.939] -- 0:03:55
817000 -- (-3894.514) (-3899.533) [-3895.078] (-3883.528) * (-3892.024) (-3888.225) (-3899.934) [-3871.003] -- 0:03:54
818000 -- [-3877.888] (-3891.761) (-3890.885) (-3877.514) * [-3895.709] (-3895.805) (-3892.584) (-3882.226) -- 0:03:52
819000 -- (-3904.022) (-3889.607) (-3890.755) [-3884.819] * (-3901.479) (-3899.533) [-3883.527] (-3879.734) -- 0:03:51
820000 -- (-3897.035) [-3877.087] (-3874.422) (-3892.988) * (-3903.761) (-3892.025) [-3885.580] (-3892.769) -- 0:03:50
Average standard deviation of split frequencies: 0.013523
821000 -- (-3897.820) (-3901.989) [-3879.533] (-3882.794) * (-3893.691) (-3898.728) [-3885.629] (-3888.374) -- 0:03:48
822000 -- (-3892.582) (-3898.097) (-3887.296) [-3893.835] * [-3877.811] (-3911.049) (-3894.315) (-3889.468) -- 0:03:47
823000 -- [-3881.119] (-3887.152) (-3892.666) (-3904.158) * (-3876.837) (-3903.590) (-3893.590) [-3889.342] -- 0:03:46
824000 -- (-3890.094) (-3897.869) [-3877.179] (-3899.504) * [-3887.946] (-3899.124) (-3875.523) (-3909.012) -- 0:03:44
825000 -- [-3878.610] (-3887.244) (-3891.100) (-3891.833) * (-3876.289) (-3901.356) [-3876.007] (-3881.664) -- 0:03:43
Average standard deviation of split frequencies: 0.013224
826000 -- (-3889.613) (-3889.761) (-3891.373) [-3882.167] * [-3869.467] (-3904.370) (-3898.343) (-3882.061) -- 0:03:42
827000 -- [-3881.506] (-3889.037) (-3891.207) (-3889.593) * (-3875.916) [-3891.318] (-3894.151) (-3885.305) -- 0:03:41
828000 -- (-3882.728) (-3889.831) [-3887.054] (-3891.843) * (-3881.609) (-3904.128) [-3876.739] (-3891.690) -- 0:03:39
829000 -- (-3892.259) (-3888.288) (-3899.630) [-3894.955] * (-3906.343) (-3912.352) [-3889.568] (-3891.957) -- 0:03:38
830000 -- (-3882.082) (-3882.556) [-3883.532] (-3909.730) * (-3897.338) (-3908.753) (-3883.623) [-3882.318] -- 0:03:37
Average standard deviation of split frequencies: 0.013377
831000 -- (-3894.129) [-3873.135] (-3894.765) (-3892.026) * (-3885.989) (-3889.087) (-3898.116) [-3883.925] -- 0:03:35
832000 -- [-3880.986] (-3901.098) (-3898.520) (-3882.238) * [-3884.217] (-3893.101) (-3895.275) (-3886.119) -- 0:03:34
833000 -- [-3881.623] (-3904.699) (-3893.054) (-3878.243) * (-3891.920) (-3894.439) (-3900.204) [-3880.210] -- 0:03:33
834000 -- (-3892.089) (-3896.329) (-3887.923) [-3890.076] * [-3870.906] (-3893.756) (-3883.386) (-3901.720) -- 0:03:32
835000 -- (-3890.944) (-3893.869) [-3887.797] (-3888.747) * (-3891.937) (-3893.407) [-3872.874] (-3899.444) -- 0:03:30
Average standard deviation of split frequencies: 0.013372
836000 -- (-3891.240) (-3890.679) [-3888.236] (-3900.251) * [-3886.615] (-3894.404) (-3905.379) (-3898.493) -- 0:03:29
837000 -- [-3886.567] (-3900.152) (-3885.852) (-3885.608) * (-3905.129) [-3899.611] (-3878.576) (-3896.875) -- 0:03:28
838000 -- (-3874.309) [-3883.914] (-3886.670) (-3896.747) * (-3902.204) (-3899.632) [-3886.505] (-3913.610) -- 0:03:27
839000 -- (-3891.554) (-3897.338) [-3885.289] (-3887.130) * (-3895.639) [-3878.241] (-3905.964) (-3894.900) -- 0:03:25
840000 -- (-3890.340) [-3885.449] (-3891.592) (-3894.207) * (-3897.779) [-3875.582] (-3909.615) (-3881.964) -- 0:03:24
Average standard deviation of split frequencies: 0.013458
841000 -- (-3904.778) [-3882.216] (-3900.776) (-3880.694) * (-3907.218) (-3881.873) [-3876.271] (-3879.101) -- 0:03:23
842000 -- (-3906.325) [-3882.037] (-3883.413) (-3895.419) * (-3890.694) (-3898.277) [-3890.466] (-3905.539) -- 0:03:21
843000 -- (-3896.364) [-3883.974] (-3878.195) (-3877.689) * (-3904.333) (-3896.533) (-3889.657) [-3877.400] -- 0:03:20
844000 -- (-3905.685) (-3896.000) [-3879.400] (-3885.891) * (-3898.282) (-3896.641) (-3887.731) [-3882.950] -- 0:03:19
845000 -- (-3906.201) [-3886.158] (-3897.463) (-3884.516) * [-3887.984] (-3889.974) (-3894.061) (-3883.078) -- 0:03:18
Average standard deviation of split frequencies: 0.013755
846000 -- [-3885.483] (-3887.051) (-3883.100) (-3881.893) * (-3905.817) (-3914.723) (-3888.649) [-3886.430] -- 0:03:16
847000 -- (-3897.042) (-3883.120) (-3881.397) [-3877.132] * (-3918.877) (-3892.233) (-3893.934) [-3889.851] -- 0:03:15
848000 -- (-3904.335) (-3896.362) (-3880.006) [-3882.915] * (-3909.973) (-3896.344) (-3882.207) [-3882.319] -- 0:03:14
849000 -- (-3897.635) (-3886.234) [-3878.185] (-3886.563) * [-3894.705] (-3879.305) (-3886.966) (-3893.423) -- 0:03:12
850000 -- [-3886.987] (-3893.927) (-3883.841) (-3898.198) * (-3885.228) (-3902.394) [-3892.516] (-3884.642) -- 0:03:11
Average standard deviation of split frequencies: 0.014028
851000 -- (-3893.852) (-3877.359) (-3900.525) [-3881.192] * (-3890.696) [-3875.147] (-3915.850) (-3885.515) -- 0:03:10
852000 -- (-3895.244) [-3884.839] (-3894.767) (-3895.671) * (-3887.572) (-3885.801) (-3914.414) [-3894.210] -- 0:03:09
853000 -- [-3881.568] (-3894.041) (-3921.362) (-3888.812) * (-3888.122) (-3903.448) [-3896.691] (-3902.310) -- 0:03:07
854000 -- (-3881.283) (-3902.649) (-3906.776) [-3882.431] * (-3906.445) (-3898.632) (-3888.240) [-3882.608] -- 0:03:06
855000 -- (-3878.845) (-3894.215) (-3895.044) [-3898.504] * (-3899.749) (-3890.836) [-3871.392] (-3875.715) -- 0:03:05
Average standard deviation of split frequencies: 0.014098
856000 -- (-3877.660) (-3905.763) (-3888.228) [-3879.108] * [-3885.439] (-3900.237) (-3894.374) (-3872.098) -- 0:03:04
857000 -- (-3899.125) (-3875.191) (-3896.977) [-3886.842] * [-3872.353] (-3892.483) (-3900.060) (-3885.580) -- 0:03:02
858000 -- (-3899.061) (-3895.127) (-3892.984) [-3877.212] * [-3874.989] (-3907.909) (-3887.211) (-3892.791) -- 0:03:01
859000 -- (-3905.460) [-3892.750] (-3887.086) (-3887.670) * (-3881.772) (-3882.080) (-3887.986) [-3882.754] -- 0:03:00
860000 -- (-3898.528) (-3882.550) (-3901.262) [-3874.243] * (-3888.579) [-3878.006] (-3885.476) (-3890.763) -- 0:02:58
Average standard deviation of split frequencies: 0.014162
861000 -- (-3911.349) (-3896.290) (-3886.652) [-3876.669] * (-3883.838) [-3878.544] (-3889.278) (-3887.009) -- 0:02:57
862000 -- (-3898.228) (-3886.032) [-3869.538] (-3891.301) * (-3889.022) (-3897.999) [-3897.835] (-3895.898) -- 0:02:56
863000 -- (-3903.121) (-3911.020) [-3879.111] (-3883.743) * (-3900.029) (-3911.566) [-3894.811] (-3886.958) -- 0:02:55
864000 -- (-3877.971) (-3900.342) [-3866.328] (-3900.184) * (-3889.845) (-3901.023) (-3880.636) [-3869.259] -- 0:02:53
865000 -- (-3891.940) (-3918.036) [-3880.700] (-3878.329) * [-3873.596] (-3908.078) (-3894.052) (-3881.871) -- 0:02:52
Average standard deviation of split frequencies: 0.014277
866000 -- (-3896.471) (-3911.949) (-3894.634) [-3881.133] * [-3880.915] (-3908.797) (-3885.872) (-3889.459) -- 0:02:51
867000 -- (-3908.710) [-3889.651] (-3880.855) (-3908.911) * (-3890.447) (-3900.403) (-3904.841) [-3878.217] -- 0:02:49
868000 -- (-3884.596) (-3904.299) (-3909.723) [-3868.391] * [-3870.717] (-3936.078) (-3890.696) (-3897.158) -- 0:02:48
869000 -- (-3881.052) (-3910.663) [-3878.442] (-3877.456) * (-3892.635) (-3895.566) [-3892.995] (-3899.409) -- 0:02:47
870000 -- (-3883.659) [-3871.815] (-3884.742) (-3903.986) * (-3896.372) (-3894.412) (-3899.145) [-3886.448] -- 0:02:46
Average standard deviation of split frequencies: 0.014201
871000 -- (-3880.763) (-3902.299) (-3882.252) [-3892.039] * [-3885.682] (-3906.933) (-3891.383) (-3886.404) -- 0:02:44
872000 -- [-3890.372] (-3899.133) (-3887.833) (-3885.195) * [-3894.484] (-3908.269) (-3881.249) (-3894.919) -- 0:02:43
873000 -- (-3915.358) [-3876.827] (-3896.573) (-3905.109) * (-3889.874) (-3891.516) (-3896.942) [-3876.579] -- 0:02:42
874000 -- (-3892.092) (-3885.697) (-3904.847) [-3883.869] * (-3893.690) (-3891.242) [-3879.566] (-3892.551) -- 0:02:41
875000 -- (-3887.423) (-3890.766) [-3876.103] (-3883.103) * (-3889.880) (-3900.844) [-3888.321] (-3894.399) -- 0:02:39
Average standard deviation of split frequencies: 0.014268
876000 -- [-3891.040] (-3877.360) (-3886.800) (-3888.459) * (-3895.689) (-3892.781) (-3893.772) [-3872.057] -- 0:02:38
877000 -- (-3882.245) (-3882.780) [-3888.965] (-3891.224) * (-3889.143) (-3888.746) (-3916.397) [-3875.744] -- 0:02:37
878000 -- [-3889.550] (-3897.704) (-3901.179) (-3890.386) * (-3890.855) [-3888.257] (-3888.825) (-3892.179) -- 0:02:35
879000 -- [-3884.569] (-3901.509) (-3901.266) (-3893.203) * (-3912.420) (-3909.509) [-3886.906] (-3883.608) -- 0:02:34
880000 -- [-3883.135] (-3898.033) (-3884.446) (-3889.818) * (-3894.283) (-3891.808) [-3873.296] (-3881.690) -- 0:02:33
Average standard deviation of split frequencies: 0.014636
881000 -- (-3896.461) [-3879.156] (-3894.277) (-3881.944) * (-3884.202) (-3898.308) [-3885.804] (-3875.171) -- 0:02:32
882000 -- (-3894.298) [-3880.174] (-3891.655) (-3888.539) * (-3895.909) (-3903.206) (-3895.495) [-3893.909] -- 0:02:30
883000 -- [-3879.749] (-3876.880) (-3886.612) (-3904.763) * (-3887.299) (-3908.893) [-3885.216] (-3905.224) -- 0:02:29
884000 -- (-3894.180) [-3889.580] (-3874.772) (-3886.233) * (-3905.480) (-3899.569) (-3881.760) [-3890.865] -- 0:02:28
885000 -- [-3890.930] (-3878.803) (-3882.157) (-3902.544) * (-3904.016) (-3904.423) [-3874.347] (-3883.028) -- 0:02:26
Average standard deviation of split frequencies: 0.014487
886000 -- (-3884.612) (-3900.329) (-3889.004) [-3870.145] * (-3890.052) [-3896.769] (-3899.224) (-3888.149) -- 0:02:25
887000 -- (-3880.734) [-3891.698] (-3884.400) (-3891.890) * [-3877.589] (-3899.347) (-3894.895) (-3890.287) -- 0:02:24
888000 -- (-3881.024) [-3875.859] (-3893.864) (-3892.039) * (-3895.703) (-3914.261) [-3892.219] (-3897.033) -- 0:02:23
889000 -- (-3896.817) (-3892.999) [-3880.669] (-3891.319) * (-3899.548) (-3892.523) [-3876.613] (-3893.734) -- 0:02:21
890000 -- (-3886.554) [-3877.084] (-3887.418) (-3891.552) * (-3886.505) (-3884.040) [-3875.569] (-3908.348) -- 0:02:20
Average standard deviation of split frequencies: 0.014638
891000 -- (-3881.628) [-3881.696] (-3891.712) (-3883.604) * (-3892.517) (-3885.065) [-3881.164] (-3895.458) -- 0:02:19
892000 -- (-3901.752) [-3879.125] (-3902.015) (-3881.170) * (-3904.207) (-3896.331) (-3893.989) [-3876.645] -- 0:02:18
893000 -- (-3893.858) (-3880.534) (-3908.169) [-3881.685] * (-3892.949) (-3875.023) (-3889.205) [-3882.745] -- 0:02:16
894000 -- (-3904.976) [-3890.763] (-3896.630) (-3891.757) * (-3903.837) (-3874.856) (-3884.608) [-3883.102] -- 0:02:15
895000 -- [-3894.626] (-3889.280) (-3903.746) (-3896.967) * [-3873.602] (-3901.067) (-3877.994) (-3899.855) -- 0:02:14
Average standard deviation of split frequencies: 0.014761
896000 -- (-3902.148) [-3880.092] (-3892.459) (-3887.333) * (-3891.692) (-3911.364) (-3887.312) [-3891.127] -- 0:02:13
897000 -- [-3888.443] (-3879.313) (-3916.666) (-3907.376) * (-3894.792) (-3903.668) (-3878.179) [-3883.668] -- 0:02:11
898000 -- (-3881.267) [-3886.543] (-3899.388) (-3915.263) * (-3887.284) (-3913.161) (-3899.749) [-3879.868] -- 0:02:10
899000 -- (-3875.588) (-3889.616) (-3897.532) [-3890.174] * (-3896.082) [-3896.709] (-3876.593) (-3882.627) -- 0:02:09
900000 -- [-3881.840] (-3884.862) (-3896.484) (-3892.475) * (-3876.780) (-3914.198) [-3885.341] (-3903.634) -- 0:02:07
Average standard deviation of split frequencies: 0.014580
901000 -- (-3885.787) [-3882.385] (-3887.709) (-3869.209) * [-3884.008] (-3906.710) (-3892.101) (-3888.114) -- 0:02:06
902000 -- (-3906.610) (-3898.780) (-3899.997) [-3876.839] * [-3885.855] (-3898.372) (-3889.271) (-3886.975) -- 0:02:05
903000 -- (-3888.940) (-3901.732) (-3898.203) [-3885.005] * (-3894.293) [-3882.123] (-3886.615) (-3880.741) -- 0:02:03
904000 -- (-3896.675) [-3874.440] (-3893.637) (-3882.326) * [-3879.154] (-3895.663) (-3883.510) (-3878.130) -- 0:02:02
905000 -- [-3891.477] (-3896.603) (-3893.065) (-3897.330) * (-3900.463) (-3886.245) [-3876.743] (-3894.226) -- 0:02:01
Average standard deviation of split frequencies: 0.014405
906000 -- (-3889.201) (-3914.846) (-3894.628) [-3885.350] * (-3881.949) (-3900.250) [-3884.559] (-3905.143) -- 0:02:00
907000 -- (-3894.857) (-3893.453) (-3889.129) [-3880.341] * (-3887.552) (-3894.062) (-3895.230) [-3885.783] -- 0:01:58
908000 -- (-3905.606) (-3890.961) (-3899.005) [-3876.765] * [-3892.171] (-3885.391) (-3891.009) (-3896.908) -- 0:01:57
909000 -- (-3883.327) [-3882.219] (-3917.686) (-3895.414) * (-3885.875) (-3890.988) [-3878.684] (-3882.383) -- 0:01:56
910000 -- (-3887.421) [-3881.654] (-3903.605) (-3889.604) * (-3889.649) (-3933.258) [-3882.631] (-3889.926) -- 0:01:55
Average standard deviation of split frequencies: 0.014405
911000 -- [-3872.066] (-3885.551) (-3896.457) (-3917.352) * [-3884.575] (-3916.112) (-3877.068) (-3896.793) -- 0:01:53
912000 -- (-3890.443) (-3899.376) (-3890.190) [-3879.731] * [-3884.823] (-3910.651) (-3895.541) (-3896.531) -- 0:01:52
913000 -- [-3869.217] (-3882.371) (-3876.827) (-3889.387) * (-3891.525) (-3915.465) (-3887.636) [-3889.446] -- 0:01:51
914000 -- [-3881.831] (-3876.661) (-3900.360) (-3885.650) * [-3870.799] (-3903.152) (-3898.620) (-3877.927) -- 0:01:49
915000 -- (-3891.783) [-3873.005] (-3907.720) (-3887.334) * (-3886.300) (-3891.181) (-3886.071) [-3889.671] -- 0:01:48
Average standard deviation of split frequencies: 0.014557
916000 -- (-3892.361) [-3872.201] (-3902.289) (-3894.319) * [-3870.536] (-3893.287) (-3880.331) (-3903.326) -- 0:01:47
917000 -- (-3893.672) (-3886.690) [-3884.809] (-3880.651) * [-3882.640] (-3894.093) (-3885.282) (-3905.251) -- 0:01:46
918000 -- (-3884.572) (-3896.474) (-3909.317) [-3874.389] * [-3885.068] (-3891.182) (-3917.929) (-3906.573) -- 0:01:44
919000 -- (-3888.817) [-3882.609] (-3902.409) (-3877.390) * [-3892.341] (-3895.827) (-3892.781) (-3893.824) -- 0:01:43
920000 -- (-3912.209) (-3890.283) (-3894.502) [-3891.723] * (-3890.621) (-3894.414) [-3876.491] (-3873.682) -- 0:01:42
Average standard deviation of split frequencies: 0.014278
921000 -- (-3903.013) (-3883.068) (-3918.493) [-3888.712] * (-3894.286) [-3881.052] (-3876.842) (-3883.486) -- 0:01:40
922000 -- (-3902.003) [-3875.539] (-3919.731) (-3893.123) * (-3896.872) (-3887.683) (-3885.311) [-3886.927] -- 0:01:39
923000 -- [-3894.869] (-3901.727) (-3898.638) (-3883.971) * (-3904.411) [-3893.389] (-3888.627) (-3890.847) -- 0:01:38
924000 -- (-3884.828) (-3897.051) [-3878.921] (-3881.045) * (-3882.326) (-3890.691) (-3890.069) [-3889.223] -- 0:01:37
925000 -- (-3897.809) (-3901.161) [-3872.903] (-3888.216) * (-3892.566) [-3890.505] (-3899.573) (-3881.489) -- 0:01:35
Average standard deviation of split frequencies: 0.014632
926000 -- [-3866.495] (-3895.369) (-3882.714) (-3885.230) * (-3896.417) (-3903.877) (-3878.403) [-3880.965] -- 0:01:34
927000 -- (-3881.795) (-3884.428) [-3893.364] (-3891.964) * (-3883.253) (-3910.924) (-3889.209) [-3872.858] -- 0:01:33
928000 -- [-3882.790] (-3876.924) (-3898.726) (-3888.207) * (-3898.643) (-3908.633) (-3885.215) [-3882.757] -- 0:01:32
929000 -- (-3885.652) [-3881.994] (-3885.837) (-3881.755) * (-3901.938) (-3915.945) (-3891.199) [-3868.394] -- 0:01:30
930000 -- [-3886.485] (-3889.477) (-3894.053) (-3878.845) * (-3882.202) (-3896.408) [-3876.708] (-3896.449) -- 0:01:29
Average standard deviation of split frequencies: 0.014675
931000 -- (-3878.545) (-3894.622) [-3891.858] (-3903.617) * (-3896.269) (-3892.970) [-3887.128] (-3894.755) -- 0:01:28
932000 -- (-3883.813) (-3890.471) [-3883.482] (-3913.885) * (-3898.560) (-3883.003) (-3894.859) [-3899.278] -- 0:01:26
933000 -- (-3892.317) [-3882.837] (-3880.661) (-3915.784) * (-3888.043) (-3892.045) [-3873.904] (-3884.618) -- 0:01:25
934000 -- [-3887.164] (-3891.705) (-3901.816) (-3900.356) * [-3868.207] (-3896.676) (-3883.578) (-3895.256) -- 0:01:24
935000 -- (-3892.863) [-3874.650] (-3894.023) (-3889.560) * [-3875.223] (-3901.383) (-3886.725) (-3882.561) -- 0:01:23
Average standard deviation of split frequencies: 0.015080
936000 -- (-3894.666) (-3898.739) (-3883.866) [-3881.047] * (-3888.117) (-3905.481) [-3880.902] (-3906.288) -- 0:01:21
937000 -- (-3904.704) [-3872.275] (-3893.955) (-3895.318) * [-3894.467] (-3894.142) (-3889.025) (-3899.188) -- 0:01:20
938000 -- (-3907.514) (-3865.971) [-3872.915] (-3892.268) * [-3876.653] (-3902.467) (-3892.308) (-3880.419) -- 0:01:19
939000 -- (-3903.299) (-3873.820) (-3894.770) [-3876.217] * (-3890.444) (-3904.309) [-3892.136] (-3883.767) -- 0:01:18
940000 -- (-3924.037) [-3891.210] (-3908.710) (-3891.163) * (-3884.326) (-3883.359) (-3888.161) [-3878.419] -- 0:01:16
Average standard deviation of split frequencies: 0.014948
941000 -- (-3907.340) (-3883.222) (-3886.488) [-3886.482] * (-3892.847) (-3903.625) (-3898.781) [-3876.685] -- 0:01:15
942000 -- (-3889.663) [-3893.142] (-3894.009) (-3901.483) * [-3883.984] (-3904.813) (-3886.330) (-3892.601) -- 0:01:14
943000 -- [-3873.599] (-3885.483) (-3877.801) (-3898.604) * [-3886.835] (-3879.275) (-3883.788) (-3893.640) -- 0:01:12
944000 -- [-3880.263] (-3904.735) (-3879.618) (-3895.508) * [-3869.814] (-3883.288) (-3914.630) (-3889.663) -- 0:01:11
945000 -- (-3894.090) [-3888.368] (-3903.117) (-3901.521) * (-3912.690) (-3888.011) [-3896.495] (-3903.539) -- 0:01:10
Average standard deviation of split frequencies: 0.015006
946000 -- (-3884.141) (-3884.974) (-3879.320) [-3885.207] * (-3882.885) (-3890.464) (-3894.930) [-3873.294] -- 0:01:09
947000 -- (-3886.572) (-3904.556) [-3889.762] (-3895.611) * [-3892.315] (-3898.860) (-3896.433) (-3887.462) -- 0:01:07
948000 -- (-3891.253) (-3900.028) [-3876.705] (-3884.182) * [-3882.541] (-3897.934) (-3882.620) (-3884.767) -- 0:01:06
949000 -- (-3881.521) (-3882.597) (-3887.290) [-3877.265] * (-3895.327) (-3900.211) (-3890.636) [-3881.323] -- 0:01:05
950000 -- (-3881.599) (-3883.063) (-3890.413) [-3887.444] * (-3891.028) (-3892.536) [-3887.707] (-3894.620) -- 0:01:03
Average standard deviation of split frequencies: 0.015145
951000 -- [-3880.133] (-3895.100) (-3909.892) (-3893.605) * (-3896.860) (-3881.651) [-3878.674] (-3899.540) -- 0:01:02
952000 -- (-3894.708) (-3885.542) (-3887.895) [-3873.012] * (-3886.447) (-3897.769) [-3876.568] (-3886.132) -- 0:01:01
953000 -- (-3903.987) (-3875.867) [-3887.862] (-3888.403) * (-3878.257) (-3887.726) (-3902.163) [-3874.863] -- 0:01:00
954000 -- (-3891.665) (-3897.539) (-3888.794) [-3880.667] * [-3878.797] (-3898.992) (-3909.781) (-3875.427) -- 0:00:58
955000 -- (-3892.774) (-3894.067) (-3894.305) [-3888.701] * (-3906.983) (-3911.898) (-3890.539) [-3891.204] -- 0:00:57
Average standard deviation of split frequencies: 0.014990
956000 -- (-3882.561) [-3896.156] (-3894.560) (-3889.964) * [-3892.085] (-3907.534) (-3912.014) (-3884.131) -- 0:00:56
957000 -- (-3903.204) (-3900.745) [-3887.915] (-3889.140) * [-3887.243] (-3894.447) (-3897.037) (-3888.047) -- 0:00:54
958000 -- [-3885.846] (-3911.910) (-3885.724) (-3891.953) * [-3881.916] (-3909.931) (-3904.452) (-3880.430) -- 0:00:53
959000 -- (-3878.797) [-3870.375] (-3897.110) (-3885.756) * [-3889.145] (-3900.577) (-3893.992) (-3902.380) -- 0:00:52
960000 -- (-3899.165) [-3883.964] (-3890.198) (-3874.236) * [-3884.677] (-3897.898) (-3890.660) (-3904.764) -- 0:00:51
Average standard deviation of split frequencies: 0.014637
961000 -- (-3901.338) (-3896.602) (-3878.565) [-3883.319] * [-3875.331] (-3884.679) (-3887.650) (-3902.051) -- 0:00:49
962000 -- (-3883.547) (-3893.289) [-3881.779] (-3877.514) * [-3887.784] (-3889.009) (-3895.187) (-3905.271) -- 0:00:48
963000 -- (-3889.987) (-3883.801) [-3880.444] (-3890.120) * [-3879.979] (-3897.673) (-3893.462) (-3896.436) -- 0:00:47
964000 -- [-3874.917] (-3882.122) (-3898.122) (-3888.447) * [-3892.660] (-3906.500) (-3890.987) (-3890.970) -- 0:00:46
965000 -- (-3886.927) (-3898.199) [-3893.701] (-3898.292) * (-3898.499) (-3907.432) [-3879.708] (-3903.059) -- 0:00:44
Average standard deviation of split frequencies: 0.014487
966000 -- [-3880.053] (-3900.973) (-3897.984) (-3902.869) * (-3899.900) (-3887.397) [-3880.896] (-3885.283) -- 0:00:43
967000 -- (-3894.839) [-3898.750] (-3897.209) (-3910.198) * (-3884.648) (-3897.531) (-3887.632) [-3879.615] -- 0:00:42
968000 -- (-3897.292) (-3894.126) (-3904.659) [-3886.699] * (-3901.333) (-3887.873) (-3896.205) [-3880.370] -- 0:00:40
969000 -- (-3897.984) [-3888.470] (-3897.983) (-3885.701) * (-3881.933) (-3925.832) [-3885.561] (-3879.648) -- 0:00:39
970000 -- (-3886.485) (-3892.272) (-3897.875) [-3878.670] * (-3878.988) (-3901.736) [-3891.588] (-3906.441) -- 0:00:38
Average standard deviation of split frequencies: 0.014459
971000 -- [-3887.817] (-3916.042) (-3882.986) (-3901.394) * [-3875.025] (-3893.631) (-3900.607) (-3894.198) -- 0:00:37
972000 -- [-3886.007] (-3904.371) (-3902.545) (-3899.745) * (-3893.297) (-3885.068) [-3889.986] (-3904.222) -- 0:00:35
973000 -- [-3882.030] (-3898.436) (-3884.848) (-3910.243) * (-3910.892) (-3896.852) [-3880.173] (-3890.915) -- 0:00:34
974000 -- (-3892.409) (-3909.661) [-3874.759] (-3893.842) * (-3891.334) (-3907.498) (-3901.718) [-3883.278] -- 0:00:33
975000 -- (-3900.608) (-3902.664) [-3880.632] (-3888.846) * [-3890.565] (-3907.720) (-3885.771) (-3897.588) -- 0:00:31
Average standard deviation of split frequencies: 0.014669
976000 -- (-3891.532) (-3905.334) [-3885.347] (-3884.896) * (-3892.963) (-3886.599) [-3883.551] (-3889.617) -- 0:00:30
977000 -- (-3889.117) [-3881.516] (-3896.572) (-3900.565) * (-3884.320) [-3872.171] (-3908.024) (-3906.222) -- 0:00:29
978000 -- (-3889.889) (-3897.435) (-3888.985) [-3884.502] * (-3896.256) (-3901.965) (-3910.294) [-3892.837] -- 0:00:28
979000 -- (-3876.552) [-3870.773] (-3884.583) (-3898.503) * (-3893.728) (-3900.784) (-3896.956) [-3883.968] -- 0:00:26
980000 -- [-3890.261] (-3882.249) (-3888.664) (-3915.249) * (-3890.175) (-3909.624) [-3884.053] (-3888.486) -- 0:00:25
Average standard deviation of split frequencies: 0.014723
981000 -- (-3890.134) [-3874.958] (-3894.016) (-3891.617) * (-3885.843) (-3903.518) (-3888.901) [-3877.875] -- 0:00:24
982000 -- (-3890.215) [-3880.188] (-3903.593) (-3885.823) * (-3882.876) (-3894.658) (-3892.915) [-3867.479] -- 0:00:23
983000 -- [-3882.642] (-3902.592) (-3877.264) (-3902.839) * [-3877.224] (-3904.319) (-3906.279) (-3883.504) -- 0:00:21
984000 -- (-3887.138) (-3880.223) [-3879.354] (-3882.594) * (-3876.857) (-3891.161) (-3899.388) [-3874.731] -- 0:00:20
985000 -- (-3873.119) (-3893.877) [-3885.177] (-3889.972) * (-3877.324) (-3889.503) (-3897.374) [-3877.391] -- 0:00:19
Average standard deviation of split frequencies: 0.014561
986000 -- (-3898.604) (-3890.563) (-3882.471) [-3872.166] * (-3877.262) (-3893.103) (-3894.562) [-3879.512] -- 0:00:17
987000 -- (-3890.162) [-3881.849] (-3877.214) (-3891.241) * (-3894.586) (-3919.023) [-3875.866] (-3890.621) -- 0:00:16
988000 -- [-3880.196] (-3882.268) (-3889.094) (-3903.779) * (-3898.959) (-3906.606) (-3898.411) [-3873.905] -- 0:00:15
989000 -- (-3896.364) (-3887.611) [-3876.892] (-3887.086) * (-3885.201) (-3896.635) (-3896.770) [-3885.092] -- 0:00:14
990000 -- (-3908.651) (-3884.663) (-3884.488) [-3880.235] * (-3880.121) (-3891.350) (-3883.626) [-3880.013] -- 0:00:12
Average standard deviation of split frequencies: 0.014411
991000 -- [-3884.161] (-3888.343) (-3904.641) (-3880.896) * (-3897.947) (-3888.985) (-3882.472) [-3885.147] -- 0:00:11
992000 -- (-3880.812) [-3877.372] (-3885.692) (-3907.690) * (-3904.836) (-3889.721) (-3881.062) [-3874.502] -- 0:00:10
993000 -- [-3883.701] (-3878.129) (-3901.280) (-3891.245) * (-3884.911) (-3899.371) [-3876.950] (-3901.004) -- 0:00:08
994000 -- (-3898.994) [-3878.006] (-3889.030) (-3890.327) * [-3880.196] (-3888.932) (-3879.029) (-3873.810) -- 0:00:07
995000 -- (-3896.371) (-3883.474) (-3878.631) [-3886.009] * (-3896.419) (-3897.578) [-3880.951] (-3888.020) -- 0:00:06
Average standard deviation of split frequencies: 0.014158
996000 -- (-3906.904) (-3894.968) (-3904.521) [-3884.471] * (-3889.753) (-3898.149) [-3898.856] (-3888.106) -- 0:00:05
997000 -- (-3899.394) [-3878.776] (-3893.219) (-3898.340) * [-3881.137] (-3891.819) (-3882.729) (-3897.766) -- 0:00:03
998000 -- (-3898.845) [-3882.715] (-3878.602) (-3876.240) * (-3887.320) (-3879.451) [-3868.219] (-3912.874) -- 0:00:02
999000 -- (-3894.978) [-3882.206] (-3897.207) (-3898.770) * (-3886.258) (-3901.142) [-3882.106] (-3892.646) -- 0:00:01
1000000 -- (-3899.216) (-3884.213) [-3894.082] (-3887.434) * (-3893.518) (-3898.278) (-3898.766) [-3894.846] -- 0:00:00
Average standard deviation of split frequencies: 0.014106
Analysis completed in 21 mins 19 seconds
Analysis used 1278.12 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -3861.64
Likelihood of best state for "cold" chain of run 2 was -3862.66
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
37.4 % ( 39 %) Dirichlet(Revmat{all})
56.1 % ( 33 %) Slider(Revmat{all})
22.8 % ( 25 %) Dirichlet(Pi{all})
25.7 % ( 21 %) Slider(Pi{all})
36.0 % ( 23 %) Multiplier(Alpha{1,2})
51.4 % ( 32 %) Multiplier(Alpha{3})
42.5 % ( 31 %) Slider(Pinvar{all})
52.2 % ( 57 %) ExtSPR(Tau{all},V{all})
39.6 % ( 45 %) ExtTBR(Tau{all},V{all})
53.6 % ( 53 %) NNI(Tau{all},V{all})
50.0 % ( 55 %) ParsSPR(Tau{all},V{all})
27.2 % ( 18 %) Multiplier(V{all})
58.6 % ( 58 %) Nodeslider(V{all})
25.2 % ( 30 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
36.6 % ( 29 %) Dirichlet(Revmat{all})
56.4 % ( 48 %) Slider(Revmat{all})
21.9 % ( 20 %) Dirichlet(Pi{all})
25.9 % ( 22 %) Slider(Pi{all})
36.0 % ( 30 %) Multiplier(Alpha{1,2})
51.2 % ( 28 %) Multiplier(Alpha{3})
43.3 % ( 24 %) Slider(Pinvar{all})
52.4 % ( 59 %) ExtSPR(Tau{all},V{all})
39.9 % ( 39 %) ExtTBR(Tau{all},V{all})
53.7 % ( 54 %) NNI(Tau{all},V{all})
50.5 % ( 40 %) ParsSPR(Tau{all},V{all})
27.0 % ( 13 %) Multiplier(V{all})
58.5 % ( 56 %) Nodeslider(V{all})
25.4 % ( 26 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.59 0.30 0.13
2 | 166608 0.61 0.33
3 | 165677 166571 0.64
4 | 167068 166324 167752
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.57 0.27 0.11
2 | 166297 0.60 0.30
3 | 166532 166815 0.62
4 | 166992 166363 167001
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -3878.36
| 2 |
| |
| 2 1 1 |
| 1 1 1 1 1 2 |
| 1 2 1 2 1 |
| 1 1 2 |
| 1 1 111 2 2 2 22 1 2 *|
|1 11 1 1 2 1 1 1 112 1* 1 |
| 1 2* 2*2 2 2 1 22 1 1 1 1 2 2 12 |
| * 1 2 2 2 * 1 11 2 2 2* 2 2 |
|2 2 2 221 1 2 2 21 1 1 |
| 2 2 2 2 *1 |
| 2 1 2 1 2 2 2 |
| 2 1 2 |
| 2 1 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -3886.47
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -3870.78 -3901.36
2 -3869.76 -3902.93
--------------------------------------
TOTAL -3870.14 -3902.43
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.386379 0.001121 0.323369 0.452179 0.384067 1299.20 1371.60 1.000
r(A<->C){all} 0.110402 0.000365 0.075333 0.149691 0.109626 947.91 1015.97 1.000
r(A<->G){all} 0.202462 0.000657 0.154835 0.255233 0.201863 805.38 808.50 1.000
r(A<->T){all} 0.103791 0.000326 0.068042 0.138162 0.102809 1028.96 1030.32 1.001
r(C<->G){all} 0.077018 0.000288 0.043497 0.109340 0.076013 538.01 722.95 1.000
r(C<->T){all} 0.415361 0.001259 0.345082 0.481057 0.415222 696.16 707.55 1.000
r(G<->T){all} 0.090966 0.000310 0.059116 0.127219 0.089964 775.01 856.81 1.002
pi(A){all} 0.287446 0.000132 0.265639 0.310414 0.287243 995.21 1100.21 1.000
pi(C){all} 0.225170 0.000113 0.205139 0.245962 0.224785 1011.07 1086.31 1.000
pi(G){all} 0.257797 0.000124 0.237675 0.281027 0.257894 980.25 992.99 1.003
pi(T){all} 0.229587 0.000112 0.209770 0.251015 0.229735 938.14 1075.57 1.000
alpha{1,2} 0.274753 0.006835 0.134172 0.447226 0.265075 721.14 784.27 1.000
alpha{3} 2.822970 2.062702 0.575984 5.630092 2.552589 887.77 1041.56 1.000
pinvar{all} 0.554729 0.004398 0.426515 0.667807 0.563524 398.30 639.33 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C11
4 -- C12
5 -- C13
6 -- C14
7 -- C15
8 -- C16
9 -- C17
10 -- C18
11 -- C19
12 -- C2
13 -- C20
14 -- C21
15 -- C22
16 -- C23
17 -- C24
18 -- C25
19 -- C26
20 -- C27
21 -- C28
22 -- C3
23 -- C4
24 -- C5
25 -- C6
26 -- C7
27 -- C8
28 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
----------------------------------
1 -- .***************************
2 -- .*..........................
3 -- ..*.........................
4 -- ...*........................
5 -- ....*.......................
6 -- .....*......................
7 -- ......*.....................
8 -- .......*....................
9 -- ........*...................
10 -- .........*..................
11 -- ..........*.................
12 -- ...........*................
13 -- ............*...............
14 -- .............*..............
15 -- ..............*.............
16 -- ...............*............
17 -- ................*...........
18 -- .................*..........
19 -- ..................*.........
20 -- ...................*........
21 -- ....................*.......
22 -- .....................*......
23 -- ......................*.....
24 -- .......................*....
25 -- ........................*...
26 -- .........................*..
27 -- ..........................*.
28 -- ...........................*
29 -- .....*.........*............
30 -- ........*.*.............*...
31 -- ....*......*..*.**.*..*.....
32 -- .********.******************
33 -- .***...*....**....*.**...*.*
34 -- ....*......*..*.**.*..**..*.
35 -- ....***.*.**..****.*..***.*.
36 -- ....*......*..*.**.*..**....
37 -- ..............*.*..*........
38 -- .***........**....*.**...*.*
39 -- ....**.....*..****.*..**..*.
40 -- ....**..*.**..****.*..***.*.
41 -- ..........*.............*...
42 -- ................*..*........
43 -- ........*.*.................
44 -- ..............*.*...........
45 -- ..............*....*........
46 -- ........*...............*...
47 -- ....*......*.....*....*.....
48 -- ....*......*................
49 -- .................*....*.....
50 -- ....*............*..........
51 -- ....*.................*.....
52 -- ...........*..........*.....
53 -- ..............*.**.*........
54 -- ....*......*..*.*..*..*.....
55 -- ....*.........*.*..*........
56 -- ..............*.*..*..*.....
57 -- ...........*..*.**.*..*.....
58 -- ...........*..*.*..*........
59 -- ...........*.....*..........
60 -- ....*......*..*.**.*........
61 -- ....*.........*.**.*..*.....
62 -- ......*.*.*.............*...
63 -- ....*......*..........*.....
----------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
29 3002 1.000000 0.000000 1.000000 1.000000 2
30 3002 1.000000 0.000000 1.000000 1.000000 2
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 3002 1.000000 0.000000 1.000000 1.000000 2
33 3002 1.000000 0.000000 1.000000 1.000000 2
34 2870 0.956029 0.062184 0.912059 1.000000 2
35 2870 0.956029 0.062184 0.912059 1.000000 2
36 2842 0.946702 0.060300 0.904064 0.989340 2
37 2808 0.935376 0.008480 0.929380 0.941372 2
38 2626 0.874750 0.003769 0.872085 0.877415 2
39 2588 0.862092 0.068779 0.813458 0.910726 2
40 2474 0.824117 0.044283 0.792805 0.855430 2
41 1125 0.374750 0.025910 0.356429 0.393071 2
42 1011 0.336775 0.011777 0.328448 0.345103 2
43 973 0.324117 0.031563 0.301799 0.346436 2
44 970 0.323118 0.013191 0.313791 0.332445 2
45 948 0.315789 0.003769 0.313125 0.318454 2
46 904 0.301133 0.005653 0.297135 0.305130 2
47 556 0.185210 0.009422 0.178548 0.191872 2
48 463 0.154231 0.012719 0.145237 0.163225 2
49 457 0.152232 0.011777 0.143904 0.160560 2
50 434 0.144570 0.000942 0.143904 0.145237 2
51 431 0.143571 0.004240 0.140573 0.146569 2
52 426 0.141905 0.005653 0.137908 0.145903 2
53 414 0.137908 0.001884 0.136576 0.139241 2
54 412 0.137242 0.000000 0.137242 0.137242 2
55 409 0.136243 0.000471 0.135909 0.136576 2
56 408 0.135909 0.000000 0.135909 0.135909 2
57 405 0.134910 0.009893 0.127915 0.141905 2
58 403 0.134244 0.013662 0.124584 0.143904 2
59 400 0.133245 0.004711 0.129913 0.136576 2
60 388 0.129247 0.002827 0.127249 0.131246 2
61 387 0.128914 0.004240 0.125916 0.131912 2
62 324 0.107928 0.005653 0.103931 0.111925 2
63 294 0.097935 0.003769 0.095270 0.100600 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.003038 0.000002 0.000426 0.006048 0.002771 1.001 2
length{all}[2] 0.000805 0.000001 0.000000 0.002453 0.000559 1.000 2
length{all}[3] 0.000761 0.000001 0.000001 0.002318 0.000528 1.000 2
length{all}[4] 0.000795 0.000001 0.000000 0.002425 0.000556 1.001 2
length{all}[5] 0.000790 0.000001 0.000000 0.002367 0.000543 1.000 2
length{all}[6] 0.000843 0.000001 0.000001 0.002498 0.000554 1.001 2
length{all}[7] 0.034371 0.000048 0.021647 0.048352 0.034099 1.000 2
length{all}[8] 0.002863 0.000003 0.000068 0.006468 0.002541 1.000 2
length{all}[9] 0.001521 0.000001 0.000052 0.003741 0.001254 1.001 2
length{all}[10] 0.000903 0.000001 0.000001 0.002750 0.000620 1.000 2
length{all}[11] 0.000803 0.000001 0.000001 0.002417 0.000545 1.000 2
length{all}[12] 0.000756 0.000001 0.000000 0.002304 0.000528 1.003 2
length{all}[13] 0.000761 0.000001 0.000000 0.002250 0.000526 1.001 2
length{all}[14] 0.000766 0.000001 0.000000 0.002246 0.000528 1.000 2
length{all}[15] 0.000776 0.000001 0.000000 0.002312 0.000523 1.000 2
length{all}[16] 0.001585 0.000001 0.000080 0.003866 0.001316 1.001 2
length{all}[17] 0.000773 0.000001 0.000000 0.002333 0.000533 1.000 2
length{all}[18] 0.003055 0.000002 0.000550 0.006056 0.002806 1.000 2
length{all}[19] 0.000781 0.000001 0.000002 0.002315 0.000522 1.000 2
length{all}[20] 0.000824 0.000001 0.000000 0.002437 0.000561 1.000 2
length{all}[21] 0.000793 0.000001 0.000000 0.002345 0.000537 1.000 2
length{all}[22] 0.000769 0.000001 0.000000 0.002239 0.000544 1.000 2
length{all}[23] 0.001549 0.000001 0.000077 0.003643 0.001277 1.000 2
length{all}[24] 0.018541 0.000022 0.010441 0.028599 0.018170 1.001 2
length{all}[25] 0.000756 0.000001 0.000000 0.002285 0.000508 1.000 2
length{all}[26] 0.000807 0.000001 0.000000 0.002416 0.000563 1.000 2
length{all}[27] 0.015502 0.000019 0.007309 0.024170 0.015109 1.000 2
length{all}[28] 0.001554 0.000001 0.000007 0.003775 0.001275 1.000 2
length{all}[29] 0.020989 0.000025 0.012095 0.030867 0.020375 1.000 2
length{all}[30] 0.056383 0.000079 0.040668 0.074598 0.055807 1.000 2
length{all}[31] 0.026849 0.000031 0.016294 0.038087 0.026456 1.001 2
length{all}[32] 0.084579 0.000161 0.060799 0.109058 0.083830 1.001 2
length{all}[33] 0.025938 0.000065 0.011674 0.041475 0.024709 1.024 2
length{all}[34] 0.012473 0.000017 0.005156 0.020853 0.012037 1.000 2
length{all}[35] 0.025955 0.000041 0.013402 0.037406 0.025435 1.001 2
length{all}[36] 0.010472 0.000013 0.003919 0.017774 0.010000 1.000 2
length{all}[37] 0.001578 0.000001 0.000026 0.003700 0.001333 1.000 2
length{all}[38] 0.002987 0.000003 0.000118 0.006108 0.002759 1.000 2
length{all}[39] 0.005810 0.000010 0.000282 0.011679 0.005467 1.000 2
length{all}[40] 0.006242 0.000013 0.000002 0.012755 0.005715 1.000 2
length{all}[41] 0.000888 0.000001 0.000000 0.002808 0.000589 0.999 2
length{all}[42] 0.000786 0.000001 0.000002 0.002354 0.000547 0.999 2
length{all}[43] 0.000760 0.000001 0.000001 0.002308 0.000509 0.999 2
length{all}[44] 0.000772 0.000001 0.000000 0.002467 0.000531 1.000 2
length{all}[45] 0.000836 0.000001 0.000000 0.002475 0.000562 0.999 2
length{all}[46] 0.000760 0.000001 0.000000 0.002359 0.000542 1.000 2
length{all}[47] 0.000974 0.000001 0.000000 0.002737 0.000758 0.998 2
length{all}[48] 0.000722 0.000000 0.000003 0.002147 0.000558 0.998 2
length{all}[49] 0.000763 0.000001 0.000004 0.002030 0.000528 0.998 2
length{all}[50] 0.000812 0.000001 0.000001 0.002206 0.000616 0.998 2
length{all}[51] 0.000825 0.000001 0.000001 0.002377 0.000529 0.998 2
length{all}[52] 0.000794 0.000001 0.000003 0.002611 0.000551 0.998 2
length{all}[53] 0.000872 0.000001 0.000003 0.002632 0.000559 0.999 2
length{all}[54] 0.000852 0.000001 0.000002 0.002564 0.000617 1.009 2
length{all}[55] 0.000745 0.000000 0.000002 0.002149 0.000565 1.006 2
length{all}[56] 0.000789 0.000001 0.000000 0.002478 0.000537 1.004 2
length{all}[57] 0.000801 0.000001 0.000001 0.002335 0.000550 1.003 2
length{all}[58] 0.000771 0.000001 0.000000 0.002517 0.000548 1.000 2
length{all}[59] 0.000812 0.000001 0.000005 0.002325 0.000597 0.998 2
length{all}[60] 0.000798 0.000001 0.000003 0.002566 0.000536 0.998 2
length{all}[61] 0.000871 0.000001 0.000002 0.002560 0.000589 0.998 2
length{all}[62] 0.003688 0.000008 0.000012 0.009176 0.003122 0.998 2
length{all}[63] 0.000796 0.000001 0.000003 0.002415 0.000590 1.000 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.014106
Maximum standard deviation of split frequencies = 0.068779
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.024
Clade credibility values:
/---------------------------------------------------------------------- C1 (1)
|
|---------------------------------------------------------------------- C18 (10)
|
| /-------- C10 (2)
| |
| |-------- C11 (3)
| |
| |-------- C12 (4)
| |
| |-------- C20 (13)
| |
| |-------- C21 (14)
| /---87--+
| | |-------- C26 (19)
| | |
| | |-------- C28 (21)
| | |
+ | |-------- C3 (22)
| /---------------------100---------------------+ |
| | | |-------- C7 (26)
| | | |
| | | \-------- C9 (28)
| | |
| | \---------------- C16 (8)
| |
| | /---------------- C13 (5)
| | |
| | |---------------- C2 (12)
| | |
| | | /-------- C22 (15)
| | | |
| | /--100-+---94--+-------- C24 (17)
| | | | |
| | | | \-------- C27 (20)
\--100--+ | |
| /---95--+ |---------------- C25 (18)
| | | |
| | | \---------------- C4 (23)
| /---96--+ |
| | | \----------------------- C5 (24)
| | |
| /---86--+ \------------------------------- C8 (27)
| | |
| | | /-------- C14 (6)
| | \--------------100-------------+
| /--82--+ \-------- C23 (16)
| | |
| | | /-------- C17 (9)
| | | |
\---96--+ \------------------100-----------------+-------- C19 (11)
| |
| \-------- C6 (25)
|
\------------------------------------------------------ C15 (7)
Phylogram (based on average branch lengths):
/- C1 (1)
|
| C18 (10)
|
| /- C10 (2)
| |
| |- C11 (3)
| |
| |- C12 (4)
| |
| |- C20 (13)
| |
| |- C21 (14)
| /+
| ||- C26 (19)
| ||
| ||- C28 (21)
| ||
+ ||- C3 (22)
| /---------+|
| | ||- C7 (26)
| | ||
| | |\- C9 (28)
| | |
| | \- C16 (8)
| |
| | / C13 (5)
| | |
| | | C2 (12)
| | |
| | |- C22 (15)
| | |
| | /----------+- C24 (17)
| | | |
| | | |- C27 (20)
\---------------------------------+ | |
| /---+ |- C25 (18)
| | | |
| | | \ C4 (23)
| /----+ |
| | | \------- C5 (24)
| | |
| /-+ \------ C8 (27)
| | |
| | | /- C14 (6)
| | \-------+
| /-+ \- C23 (16)
| | |
| | | / C17 (9)
| | | |
\----------+ \----------------------+ C19 (11)
| |
| \ C6 (25)
|
\------------- C15 (7)
|-------------------| 0.050 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
Running FUBAR...
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\
***************** TYPES OF STANDARD ANALYSES *****************
(1) Selection Analyses
(2) Evolutionary Hypothesis Testing
(3) Relative evolutionary rate inference
(4) Coevolutionary analysis
(5) Basic Analyses
(6) Codon Selection Analyses
(7) Compartmentalization
(8) Data File Tools
(9) Miscellaneous
(10) Model Comparison
(11) Kernel Analysis Tools
(12) Molecular Clock
(13) Phylogeny Reconstruction
(14) Positive Selection
(15) Recombination
(16) Selection/Recombination
(17) Relative Rate
(18) Relative Ratio
(19) Substitution Rates
Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' *****************
(1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution).
(2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood).
(3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting).
(4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection).
(5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification).
(6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood).
(7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation).
Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types):
Analysis Description
--------------------
Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a
coding sequence alignment to determine whether some sites have been
subject to pervasive purifying or diversifying selection. v2.1
introduces two more methods for estimating the posterior distribution of
grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation
Bayes approximation (fastest). Please note that a FUBAR analysis
generates a cache and a results JSON file in the same directory as
directory as the original alignment. HyPhy needs to have write
privileges to this directory. For example if the original file is in
/home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there
will also exist FUBAR-generated files
/home/sergei/FUBAR/data/pol.nex.FUBAR.json,
/home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide
checkpointing so that a partially completed analysis can be restarted.
- __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree
(one per partition)
- __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring
selection (2013), Mol Biol Evol. 30(5):1196-205
- __Written by__: Sergei L Kosakovsky Pond
- __Contact Information__: spond@temple.edu
- __Analysis Version__: 2.1
####Choose Genetic Code
1. [**Universal**] Universal code. (Genebank transl_table=1).
2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2).
3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3).
4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4).
5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5).
6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6).
7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9).
8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10).
9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12).
10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13).
11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14).
12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15).
13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16).
14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21).
15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22).
16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23).
17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24).
18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25).
19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26).
>Please choose an option (or press q to cancel selection):
>Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`)
>A tree was found in the data file: `(C1,C18,(((C10,C11,C12,C20,C21,C26,C28,C3,C7,C9),C16),((((((C13,C2,(C22,C24,C27),C25,C4),C5),C8),(C14,C23)),(C17,C19,C6)),C15)))`
>Would you like to use it (y/n)?
>Loaded a multiple sequence alignment with **28** sequences, **457** codons, and **1** partitions from `/data//pss_subsets/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/results/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1.fna`
> FUBAR will write cache and result files to _/data//pss_subsets/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/results/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/results/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1.fna.FUBAR.json_, respectively
> Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer):
####Posterior estimation method
1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation)
2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed)
3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default)
>Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5):
### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model
* Log(L) = -3977.29, AIC-c = 8050.70 (48 estimated parameters)
* Tree length (expected substitutions/site) for partition 1 : 0.276
### Computing the phylogenetic likelihood function on the grid
* Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid
* Best scaling achieved for
* synonymous rate = 2.815
* non-synonymous rate = 0.500
* Computing conditional site likelihoods on a 20 x 20 rate grid
### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights
* Using the following settings
* Dirichlet alpha : 0.5
### Tabulating site-level results
| Codon | Partition | alpha | beta |Posterior prob for positive selection|
|:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:|
| 38 | 1 | 1.016 | 15.444 | Pos. posterior = 0.9691 |
| 299 | 1 | 0.699 | 5.883 | Pos. posterior = 0.9541 |
| 321 | 1 | 0.697 | 8.014 | Pos. posterior = 0.9700 |
| 383 | 1 | 0.729 | 9.286 | Pos. posterior = 0.9732 |
----
## FUBAR inferred 4 sites subject to diversifying positive selection at posterior probability >= 0.9
Of these, 0.13 are expected to be false positives (95% confidence interval of 0-1 )
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.10 sec, SCORE=1000, Nseq=28, Len=457
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGQNNGNRGRRNQPK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus MSFVPGQENAGSRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK
MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus MSFVPGQENAGSRSSFGNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus0 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus1 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus2 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus3 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus4 MSFVPGQENAGSRSSSGSRSGNGILKKTTWADQTERAGNNGNRGRRNQPK
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus5 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus6 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus7 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus8 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGQNNGNRGRRNQPK
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus9 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus0 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus1 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus2 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus3 MSFVPGQENAGSRSSSGSRSGNGILKKTTWADQTERAGNNGNRGRRNQPK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus4 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus5 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRKNQPK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus6 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus7 MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus8 MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK
***********.*** .*:****************. ****:*:**
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus QTATTQPNTGSVVPHYSWFSGITQFQKGKEFQFAGGQGVPIANGIPSSEQ
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASEQ
MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ
MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus QTATTQPNSGSVVPHYSWFSGITQFQKGKEFKFADGQGVPIANGIPASEQ
MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus0 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus1 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus2 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus3 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus4 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFVQGQGVPIANGIPASEQ
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus5 QTATTQLNSGSVVPHYSWFSGITQFQKGKQFQFAEGQGVPIANGIPATEQ
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus6 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus7 QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus8 QTATTQPNTGSVVPHYSWFSGITQFQKGKEFQFAGGQGVPIANGIPSSEQ
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus9 QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus0 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus1 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus2 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus3 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFVQGQGVPIANGIPASEQ
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus4 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus5 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus6 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus7 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus8 QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ
****** *:********************:*:*. *******.***:::*
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus KGYWYRHNRRSFKTPGGQQKQLLPRWYFYYLGTGPHAGASFGDSIEGVFW
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIDGVVW
MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIDGVVW
MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus0 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus1 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus2 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus3 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus4 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus5 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDNIEGVVW
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus6 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus7 KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus8 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASFGDSIEGVFW
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus9 KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus0 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus1 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus2 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus3 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus4 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus5 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus6 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus7 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus8 KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW
***************.**:****************:***.:**.*:**.*
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus VANSQADTNTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus0 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus1 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus2 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus3 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus4 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus5 VASHQADTKTSADIVERDPSSHEAIPTRFAPGTVIPQGFYVEGSGRSAPA
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus6 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus7 VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus8 VANSQADTNTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus9 VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus0 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus1 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus2 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus3 VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus4 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus5 VASQQAETRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus6 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus7 VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus8 VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA
**. **:*.* :*:********************:***************
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus SRSGSRSQSRGPNNRARSSSNQRQAASTVKPDMAEEIAALVLAKLGKDAG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG
MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus SRSGSRSQSRGPNNRSRSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus0 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus1 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus2 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus3 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus4 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus5 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus6 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus7 SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus8 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus9 SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus0 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus1 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus2 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus3 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus4 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus5 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus6 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus7 SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus8 SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG
******.********:********.**:**********************
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus0 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus1 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus2 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus3 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus4 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus5 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus6 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus7 QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus8 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus9 QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus0 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus1 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus2 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus3 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus4 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus5 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus6 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus7 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus8 QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE
******************.*****************************.*
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus MLKLGTSDPQFPILAELAPTPGAFFFGSKLELVKKNSGGVDEPTKDVYEL
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADDPTKDVYEL
MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus0 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus1 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus2 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus3 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus4 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADEPTKDVYEL
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus5 MLKLGTNDPQFPILAELVPTPGAFFFGSKLELVKKNSGGADEPTKDVYEL
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus6 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus7 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus8 MLKLGTSDPQFPILAELAPTPGAFFFGSKLELVKKNSGGVDEPTKDVYEL
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus9 MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus0 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus1 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus2 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus3 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADEPTKDVYEL
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus4 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus5 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus6 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus7 MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus8 MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL
******.**********.** .*****************.* ********
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus HYSGAVRFDSTLSGFETIMKVLNENLNAYQNQAGGVDVVSPKPQRKRGTK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus QYSGAIRFDSTLPGFETIMKVLNENLDAYQDQAGGADVVSPKPQRKRGTK
MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR
MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus QYSGAVRFDSTLPGFETIMKVLNENLNAYQDQAGGADVVSPKPQRKRGQR
MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus0 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus1 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus2 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus3 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus4 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus5 QYSGAVRFDSTLPGFETIMKVLNENLNAYQKESGGVDVVSPKPQRK-GRR
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus6 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus7 QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus8 HYSGAVRFDSTLSGFETIMKVLNENLNAYQNQAGGVDVVSPKPQRKRGTK
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus9 QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus0 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus1 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus2 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus3 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus4 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus5 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus6 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus7 QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus8 QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR
:****:******.*********.***:*** : *..*:***** *: * :
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus QTAQK--EELDSISVAQPKSAVQRNVSRELTPEDRSLLAQILDDGVVPDG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus QKALK--GEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus QAQEKK-DEVDNVSVAKPKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG
MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus QVAQKKNDEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus QAKEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus0 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus1 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus2 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus3 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus4 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus5 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus6 QALEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus7 QAQEKK-DEVDNVSVAKLKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus8 QTAQK--EELDSISVAQPKSAVQRNVSRELTPEDRSLLAQILDDGVVPDG
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus9 QAQEKK-DEVDNVSVAKPKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus0 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus1 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus2 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus3 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus4 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus5 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus6 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus7 QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus8 QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG
* * *:*.:***: ** *****************************
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus L-DDSNV
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus LEDDSNV
A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus LEDDSNV
JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus VEDDSNV
MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus LEDDSNV
MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus LEDDSNV
MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus LEDDSNV
MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus LEDDSNV
MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus LEDDSNV
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus0 LEDDSNV
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus1 LEDDSNV
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus2 LEDDSNV
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus3 LEDDSNV
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus4 LEDDSNV
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus5 LEDDSKV
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus6 LEDDSNV
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus7 LEDDSNV
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus8 L-DDSNV
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus9 LEDDSNV
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus0 LEDDSNV
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus1 LEDDSNV
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus2 LEDDSNV
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus3 LEDDSNV
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus4 LEDDSNV
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus5 LEDDSNV
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus6 LEDDSNV
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus7 LEDDSNV
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus8 LEDDSNV
: ***:*
>8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus ATGTCTTTTGTTCCCGGGCAAGAAAACGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACAAAATAATGGCAATAGAGGCAGAAGGAATCAGCCCAAGCAGACTGCAACTACTCAGCCCAATACCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTCCAGAAGGGAAAAGAGTTCCAGTTTGCAGGTGGACAAGGAGTGCCTATTGCCAATGGAATCCCATCTTCTGAGCAAAAGGGATATTGGTATAGACACAACCGTCGTTCTTTTAAAACACCTGGCGGGCAGCAGAAGCAATTACTCCCCAGATGGTATTTTTACTATCTTGGGACGGGCCCCCATGCTGGAGCCAGTTTCGGAGACAGCATTGAGGGAGTCTTCTGGGTTGCAAATAGTCAGGCGGATACCAATACCTCTGCTGACATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTATTGCCTCAGGGTTTCTATGTTGAAGGCTCGGGAAGGTCTGCACCTGCTAGTCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAAGCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTAGGCAAAGATGCCGGACAGCCTAAGCAAGTAACTAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAATAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTCGGAGGTCCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCCCCAACACCTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGCGTTGATGAACCCACCAAAGATGTGTATGAGCTGCACTATTCAGGTGCAGTCAGATTTGATAGTACTCTATCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAACGCCTACCAGAATCAAGCTGGTGGTGTAGATGTAGTGAGCCCAAAGCCCCAAAGAAAGAGAGGGACGAAACAAACGGCTCAGAAA------GAAGAATTAGATAGTATAAGCGTTGCACAGCCCAAAAGTGCCGTGCAGCGAAATGTAAGCAGAGAACTAACCCCAGAGGATAGAAGCCTGTTGGCGCAGATCCTAGACGATGGCGTTGTGCCTGATGGGTTG---GATGACTCTAATGTG >JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGCGGGTTAAATAATCAAAATAGAGGCAGAAGGAATCAGCCCAAGCAGACTGCAACTACTCAACCCAATTCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTCCAGAAGGGAAAAGAGTTTCAGTTTGCACAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCAGCTTCACAGCAAAAGGGATATTGGTACAGACACAACCGACGTTCCTTTAAAACACCTGATGGCCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCTATGCTGGCGCAGAGTATGGCGACGATATCGAAGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAGGACCTCTGCCGATATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTATTGCCTCAAGGTTTTTATGTTGAAGGCTCAGGAAGGTCTGCACCTGCTAGTCGATCTGGTTCGCGGCCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCTAAGCAAGTAACAAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCCCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCCCCAACAGCTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGGACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAGAATCAAGATGGTGGTGCAGATGTAGTGAGCCCTAAGCCTCAGAGAAAGAGAGGGACAAAGCAAAAGGCTCAGAAA------GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCTGAGGATCGCAGCCTTCTGGCTCAGATCCTAGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTGGCAGAAGCTCCTCTGTAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAACTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAGTTCCAAAAGGGAAAGGAGTTTCAGTTTGCAGAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGCCGTTCTTTTAAAACACCTGATGGGCAGCAGAAGCAATTACTGCCCAGATGGTATTTTTACTATCTTGGCACAGGGCCCCATGCTGGAGCCAGTTATGGAGACAGCATTGAAGGTGTCTTCTGGGTTGCAAACAGCCAAGCGGACACCAATACCCGCTCTGATATTGTCGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTTGAAGGCTCTGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACGAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCTCCAACAGTTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTGGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTCAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGCGGGTTAAATAATCAAAATAGAGGCAGAAGGAATCAGCCCAAGCAGACTGCAACTACTCAACCCAATTCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTCCAGAAGGGAAAAGAGTTTCAGTTTGCACAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCAGCTTCACAGCAAAAGGGATATTGGTACAGACACAACCGACGTTCCTTTAAAACACCTGATGGCCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCTATGCTGGCGCAGAGTATGGCGACGATATCGAAGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAGGACCTCTGCCGATATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTATTGCCTCAAGGTTTTTATGTTGAAGGCTCAGGAAGGTCTGCACCTGCTAGTCGATCTGGTTCGCGGCCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCTAAGCAAGTAACAAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCCCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCCCCAACAGCTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGGACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAGAATCAAGATGGTGGTGCAGATGTAGTGAGCCCTAAGCCTCAGAGAAAGAGAGGGACAAAGCAAAAGGCTCAGAAA------GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCTGAGGATCGCAGCCTTCTGGCTCAGATCCTAGATGATGGCGTAGTGCCAGATGGGGTAGAAGATGACTCTAATGTG >MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGTAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAATTCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTTCAGAAGGGAAAAGAGTTTCAGTTTGCACAAGGACAGGGAGTGCCTATTGCCAACGGAATCCCAGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGACGGTCTTTTAAAACACCTGATGGCCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCCATGCTGGCGCAGAGTATGGCGACGATATCGACGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAAGACCACTGCCGATATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTATTGCCTCAAGGTTTTTATGTTGAAGGCTCAGGAAGGTCTGCACCTGCTAGTCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGCTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACAAAGCAAAGCGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCTGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCCCCAACACCTAGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGACCCCACCAAAGATGTGTATGAATTGCAGTATTCAGGTGCAATTAGATTTGATAGTACTCTCCCAGGATTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGGATGCCTACCAGGATCAAGCTGGTGGTGCAGATGTAGTGAGCCCAAAGCCCCAAAGAAAGAGAGGGACAAAACAAAAGGCTCTGAAA------GGTGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCTGAGGATCGTAGTCTGTTGGCTCAGATCCTTGATGATGGCGTTGTGCCTGATGGGTTAGAAGATGACTCTAATGTG >MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGCATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGA------------AATAGAGGCAGAAGGAACCATCCCAAGCAGACTGCAACTACTCAGCCCAATGCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATCACCCAGTTTCAAAAGGGAAAGGAGTTCCAGTTTGCACAAGGACAGGGAGTGCCTATTGCCAGTGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGACGTTCTTTTAAAACACCTGATGGCCAGCACAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCCATGCTGGCGCAGAGTATGGCGACGATATCGAAGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAAGACCACTGCCGATGTTGTTGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTAGAAGGCTCGGGAAGGTCTGCACCTGCTAGTCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTGCTGTAAAACCTGACATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTTGGTAAAGATGCCGGCCAGCCCAAGCAGGTAACTAAGCAAAGCGCCAAAGAAGTCAGGCAGAAAATTTTAACTAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGGAAGAGAGGCCCTAATCAGAACTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCGCAGTTCCCCATTCTTGCAGAGTTGGCTCCAACACCTAGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGAACCCACCAAAGATGTTTATGAATTGCAGTATTCAGGTGCAATTAGATTTGATAGTACTCTACCCGGTTTTGAGACTATCATGAAAGTGTTGACTGAGAATTTGAATGCCTACCAGGACCAAGCTGGTAGTGTAGATCTAGTGAGCCCAAAGCCTCCAAGAAGA---GGTCGTAGACAGGCTCAAGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTTGGTGCAGCGAAATGTAAGTAGAGAATTAACCCCCGAGGATCGTAGCCTGCTGGCTCAGATCCTAGACGATGGCGTTGTGCCAGATGGGTTGGAAGATGACTCTAATGTG >MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTGGCAGAAGCTCCTCTGTAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAACTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAGTTCCAAAAGGGAAAGGAGTTTCAGTTTGCAGAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGCCGTTCTTTTAAAACACCTGATGGGCAGCAGAAGCAATTACTGCCCAGATGGTATTTTTACTATCTTGGCACAGGGCCCCATGCTGGAGCCAGTTATGGAGACAGCATTGAAGGTGTCTTCTGGGTTGCAAACAGCCAAGCGGACACCAATACCCGCTCTGATATTGTCGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTTGAAGGCTCTGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACGAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCTCCAACAGTTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTGGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTCAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTTTGGAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGCGGACCAAATAATCAAAATAGAGGCAGGAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAATTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAATTCCAGAAGGGAAAGGAGTTTAAGTTTGCAGATGGACAGGGAGTGCCTATTGCCAATGGAATCCCAGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGACGGTCTTTTAAAACACCTGATGGCCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCCATGCTGGCGCAGAGTATGGCGACGATATCGACGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAAGACCACTGCCGATATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTATTGCCTCAAGGTTTTTATGTTGAAGGCTCAGGAAGGTCTGCACCTGCTAGTCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCTCTAGAAGCAGCTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACAAAGCAAAGCGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCTGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAAAATTTTGGAGGCCCTGAAATGTTAAAACTTGGAACTAGTGATCCGCAGTTCCCCATTCTTGCAGAGTTGGCCCCAACCCCTAGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAACGCCTACCAGGATCAAGCTGGTGGTGCAGATGTAGTGAGCCCCAAGCCCCAAAGAAAGAGAGGGCAAAGACAGGTGGCTCAAAAGAAGAATGATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTGGCAGAAGCTCCTCTGTAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAACTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAGTTCCAAAAGGGAAAGGAGTTTCAGTTTGCAGAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGCCGTTCTTTTAAAACACCTGATGGGCAGCAGAAGCAATTACTGCCCAGATGGTATTTTTACTATCTTGGCACAGGGCCCCATGCTGGAGCCAGTTATGGAGACAGCATTGAAGGTGTCTTCTGGGTTGCAAACAGCCAAGCGGACACCAATACCCGCTCTGATATTGTCGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTTGAAGGCTCTGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACGAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCTCCAACAGTTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTGGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTAAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >MHV_BHKR_lab_USA_infA59_H126A_2012_N_AGT17721_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTGGCAGAAGCTCCTCTGTAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAACTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAGTTCCAAAAGGGAAAGGAGTTTCAGTTTGCAGAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGCCGTTCTTTTAAAACACCTGATGGGCAGCAGAAGCAATTACTGCCCAGATGGTATTTTTACTATCTTGGCACAGGGCCCCATGCTGGAGCCAGTTATGGAGACAGCATTGAAGGTGTCTTCTGGGTTGCAAACAGCCAAGCGGACACCAATACCCGCTCTGATATTGTCGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTTGAAGGCTCTGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACGAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCTCCAACAGTTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTGGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTCAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >MHV_BHKR_lab_USA_icA59_L94P_2012_N_AGT17743_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTGGCAGAAGCTCCTCTGTAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAACTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAGTTCCAAAAGGGAAAGGAGTTTCAGTTTGCAGAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGCCGTTCTTTTAAAACACCTGATGGGCAGCAGAAGCAATTACTGCCCAGATGGTATTTTTACTATCTTGGCACAGGGCCCCATGCTGGAGCCAGTTATGGAGACAGCATTGAAGGTGTCTTCTGGGTTGCAAACAGCCAAGCGGACACCAATACCCGCTCTGATATTGTCGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTTGAAGGCTCTGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACGAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCTCCAACAGTTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTGGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTCAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >MHV_BHKR_lab_USA_icA59_ns2M_2012_N_AGT17754_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTGGCAGAAGCTCCTCTGTAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAACTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAGTTCCAAAAGGGAAAGGAGTTTCAGTTTGCAGAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGCCGTTCTTTTAAAACACCTGATGGGCAGCAGAAGCAATTACTGCCCAGATGGTATTTTTACTATCTTGGCACAGGGCCCCATGCTGGAGCCAGTTATGGAGACAGCATTGAAGGTGTCTTCTGGGTTGCAAACAGCCAAGCGGACACCAATACCCGCTCTGATATTGTCGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTTGAAGGCTCTGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACGAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCTCCAACAGTTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTGGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTCAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >MHV_JHM_IA_NA_ACN89761_1_NA_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGCGGGTTAAATAATCAAAATAGAGGCAGAAGGAATCAGCCCAAGCAGACTGCAACTACTCAACCCAATTCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTCCAGAAGGGAAAAGAGTTTCAGTTTGCACAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCAGCTTCACAGCAAAAGGGATATTGGTACAGACACAACCGACGTTCCTTTAAAACACCTGATGGCCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCTATGCTGGCGCAGAGTATGGCGACGATATCGAAGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAGGACCTCTGCCGATATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTATTGCCTCAAGGTTTTTATGTTGAAGGCTCAGGAAGGTCTGCACCTGCTAGTCGATCTGGTTCGCGGCCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCTAAGCAAGTAACAAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCCCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCCCCAACAGCTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGGACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAGAATCAAGATGGTGGTGCAGATGTAGTGAGCCCTAAGCCTCAGAGAAAGAGAGGGACAAAGCAAAAGGCTCAGAAA------GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCTGAGGATCGCAGCCTTCTGGCTCAGATCCTAGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >MHV_S_3239_17_NA_AFD97608_1_NA_NA_Unknown_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAGCCGCTCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGCGCTGGAAATAATGGAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAATTCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTCCAGAAGGGAAAAGAGTTTCAGTTTGTACAAGGACAGGGAGTGCCTATTGCCAATGGAATCCCAGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGACGTTCTTTTAAAACACCTGATGGCCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTCGGAACAGGGCCCCATGCTGGCGCAGAGTATGGCGACGATATCGAAGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAAGACCACTGCCGATATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTTTTGCCTCAGGGTTTTTATGTTGAAGGCTCAGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGCTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGTCAGCCCAAGCAAGTAACAAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAATGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGCTTAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCCCCAACAGCTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTAGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTCAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTAGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >MHV_MI_NC_BAJ04701_1_1994_Australia_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGACAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACTCAATTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAATTCCAGAAGGGAAAGCAGTTCCAGTTTGCAGAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCAGCTACTGAGCAAAAGGGATATTGGTATAGACACAACCGACGTTCTTTTAAAACACCTGATGGCCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCCATGCTGGCGCAGAGTATGGCGACAATATCGAAGGAGTTGTCTGGGTCGCAAGCCATCAGGCCGACACTAAGACCTCTGCCGATATTGTTGAAAGGGACCCAAGTAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTTATTCCTCAAGGCTTCTATGTTGAAGGCTCTGGAAGGTCTGCACCTGCTAGTCGATCTGGCTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGACAGCCTGCCTCTACTGTAAAACCTGACATGGCCGAAGAAATTGCTGCTCTTGTTCTTGCTAAGCTCGGTAAAGATGCCGGACAGCCGAAGCAAGTAACTAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAATGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAAAATTTTGGAGGCCCTGAGATGTTAAAACTTGGAACTAATGATCCGCAGTTCCCCATTCTTGCAGAGTTGGTCCCAACACCTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAGAAGGAATCTGGTGGTGTAGATGTAGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGCAGACAGGCTCAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCAGTGTGCAGCGAAATGTAAGTAGAGAACTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTTGTGCCAGATGGGTTAGAAGATGACTCTAAAGTG >ML_10_ORF7_AAF69349_1_NA_NA_Unknown_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTGGCAGAAGCTCCTCTGTAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAACTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAGTTCCAAAAGGGAAAGGAGTTTCAGTTTGCAGAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGCCGTTCTTTTAAAACACCTGATGGGCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGCACAGGGCCACATGCTGGAGCCAGTTATGGAGACAGCATTGAAGGAGTCTTCTGGGTTGCAAACAGCCAAGCGGACACCAATACCCGCTCTGATATTGTCGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTTGAAGGCTCTGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACGAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCTCCAACAGTTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTGGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTCTGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >ML_11_orf7_AAF68926_1_NA_NA_Unknown_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGCATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGA------------AATAGAGGCAGAAGGAACCATCCCAAGCAGACTGCAACTACTCAGCCCAATGCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATCACCCAGTTTCAAAAGGGAAAGGAGTTCCAGTTTGCACAAGGACAGGGAGTGCCTATTGCCAGTGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGACGTTCTTTTAAAACACCTGATGGCCAGCACAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCCATGCTGGCGCAGAGTATGGCGACGATATCGAAGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAAGACCACTGCCGATGTTGTTGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTAGAAGGCTCGGGAAGGTCTGCACCTGCTAGTCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTGCTGTAAAACCTGACATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTTGGTAAAGATGCCGGCCAGCCCAAGCAGGTAACTAAGCAAAGCGCCAAAGAAGTCAGGCAGAAAATTTTAACTAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGGAAGAGAGGCCCTAATCAGAACTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCGCAGTTCCCCATTCTTGCAGAGTTGGCTCCAACACCTAGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGAACCCACCAAAGATGTTTATGAATTGCAGTATTCAGGTGCAATTAGATTTGATAGTACTCTACCCGGTTTTGAGACTATCATGAAAGTGTTGACTGAGAATTTGAATGCCTACCAGGACCAAGCTGGTAGTGTAGATCTAGTGAGCCCAAAGCCTCCAAGAAGA---GGTCGTAGACAGGCTCAAGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCTCAAAAGCTTGGTGCAGCGAAATGTAAGTAGAGAATTAACCCCCGAGGATCGTAGCCTGCTGGCTCAGATCCTAGACGATGGCGTTGTGCCAGATGGGTTGGAAGATGACTCTAATGTG >Parker_N_YP_003029852_1_NA_NA_Rat_Murine_coronavirus ATGTCTTTTGTTCCCGGGCAAGAAAACGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACAAAATAATGGCAATAGAGGCAGAAGGAATCAGCCCAAGCAGACTGCAACTACTCAGCCCAATACCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTCCAGAAGGGAAAAGAGTTCCAGTTTGCAGGTGGACAAGGAGTGCCTATTGCCAATGGAATCCCATCTTCTGAGCAAAAGGGATATTGGTATAGACACAACCGTCGTTCTTTTAAAACACCTGACGGGCAGCAGAAGCAATTACTCCCCAGATGGTATTTTTACTATCTTGGGACGGGCCCCCATGCTGGAGCCAGTTTCGGAGACAGCATTGAGGGAGTCTTCTGGGTTGCAAATAGTCAGGCGGATACCAATACCTCTGCTGACATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTATTGCCTCAGGGTTTCTATGTTGAAGGCTCGGGAAGGTCTGCACCTGCTAGTCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTAGGCAAAGATGCCGGACAGCCTAAGCAAGTAACTAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAATAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTCGGAGGTCCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCCCCAACACCTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGCGTTGATGAACCCACCAAAGATGTGTATGAGCTGCACTATTCAGGTGCAGTCAGATTTGATAGTACTCTATCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAACGCCTACCAGAATCAAGCTGGTGGTGTAGATGTAGTGAGCCCAAAGCCCCAAAGAAAGAGAGGGACGAAACAAACGGCTCAGAAA------GAAGAATTAGATAGTATAAGCGTTGCACAGCCCAAAAGTGCCGTGCAGCGAAATGTAAGCAGAGAACTAACCCCAGAGGATAGAAGCCTGTTGGCGCAGATCCTAGACGATGGCGTTGTGCCTGATGGGTTG---GATGACTCTAATGTG >Penn_97_1_ORF7_AAF69338_1_NA_NA_Unknown_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGCATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGA------------AATAGAGGCAGAAGGAACCATCCCAAGCAGACTGCAACTACTCAGCCCAATGCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATCACCCAGTTTCAAAAGGGAAAGGAGTTCCAGTTTGCACAAGGACAGGGAGTGCCTATTGCCAGTGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGACGTTCTTTTAAAACACCTGATGGCCAGCACAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCCATGCTGGCGCAGAGTATGGCGACGATATCGAAGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAAGACCACTGCCGATGTTGTTGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTAGAAGGCTCGGGAAGGTCTGCACCTGCTAGTCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTGCTGTAAAACCTGACATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTTGGTAAAGATGCCGGCCAGCCCAAGCAGGTAACTAAGCAAAGCGCCAAAGAAGTCAGGCAGAAAATTTTAACTAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGGAAGAGAGGCCCTAATCAGAACTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCGCAGTTCCCCATTCTTGCAGAGTTGGCTCCAACACCTAGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGAACCCACCAAAGATGTTTATGAATTGCAGTATTCAGGTGCAATTAGATTTGATAGTACTCTACCCGGTTTTGAGACTATCATGAAAGTGTTGACTGAGAATTTGAATGCCTACCAGGACCAAGCTGGTAGTGTAGATCTAGTGAGCCCAAAGCCTCCAAGAAGA---GGTCGTAGACAGGCTCAAGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTTGGTGCAGCGAAATGTAAGTAGAGAATTAACCCCCGAGGATCGTAGCCTGCTGGCTCAGATCCTAGACGATGGCGTTGTGCCAGATGGGTTGGAAGATGACTCTAATGTG >RA59_R13_NA_ACN89686_1_2006_01_01_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTGGCAGAAGCTCCTCTGTAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAACTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAGTTCCAAAAGGGAAAGGAGTTTCAGTTTGCAGAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGCCGTTCTTTTAAAACACCTGATGGGCAGCAGAAGCAATTACTGCCCAGATGGTATTTTTACTATCTTGGCACAGGGCCCCATGCTGGAGCCAGTTATGGAGACAGCATTGAAGGTGTCTTCTGGGTTGCAAACAGCCAAGCGGACACCAATACCCGCTCTGATATTGTCGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTTGAAGGCTCTGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACGAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCTCCAACAGTTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTGGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTCAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >RA59_SJHM_NA_ACN89710_1_NA_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTGGCAGAAGCTCCTCTGTAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAACTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAGTTCCAAAAGGGAAAGGAGTTTCAGTTTGCAGAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGCCGTTCTTTTAAAACACCTGATGGGCAGCAGAAGCAATTACTGCCCAGATGGTATTTTTACTATCTTGGCACAGGGCCCCATGCTGGAGCCAGTTATGGAGACAGCATTGAAGGTGTCTTCTGGGTTGCAAACAGCCAAGCGGACACCAATACCCGCTCTGATATTGTCGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTTGAAGGCTCTGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACGAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCTCCAACAGTTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTGGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTCAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >RJHM_A_NA_ACN89697_1_NA_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGCGGGTTAAATAATCAAAATAGAGGCAGAAGGAATCAGCCCAAGCAGACTGCAACTACTCAACCCAATTCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTCCAGAAGGGAAAAGAGTTTCAGTTTGCACAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCAGCTTCACAGCAAAAGGGATATTGGTACAGACACAACCGACGTTCCTTTAAAACACCTGATGGCCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCTATGCTGGCGCAGAGTATGGCGACGATATCGAAGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAGGACCTCTGCCGATATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTATTGCCTCAAGGTTTTTATGTTGAAGGCTCAGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGCCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCTAAGCAAGTAACAAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCCCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCCCCAACAGCTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGGACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAGAATCAAGATGGTGGTGCAGATGTAGTGAGCCCTAAGCCTCAGAGAAAGAGAGGGACAAAGCAAAAGGCTCAGAAA------GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCTGAGGATCGCAGCCTTCTGGCTCAGATCCTAGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >S_N_ADI59793_1_NA_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAGCCGCTCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGCGCTGGAAATAATGGAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAATTCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTCCAGAAGGGAAAAGAGTTTCAGTTTGTACAAGGACAGGGAGTGCCTATTGCCAATGGAATCCCAGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGACGTTCTTTTAAAACACCTGATGGCCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTCGGAACAGGGCCCCATGCTGGCGCAGAGTATGGCGACGATATCGAAGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAAGACCACTGCCGATATTGTTGAAAGGGACCCTAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTTTTGCCTCAGGGTTTTTATGTTGAAGGCTCAGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGCTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGTCAGCCCAAGCAAGTAACAAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAATGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGCTTAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCCCCAACAGCTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTAGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTCAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTAGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >SA59_RJHM_NA_ACN89733_1_NA_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGCGGGTTAAATAATCAAAATAGAGGCAGAAGGAATCAGCCCAAGCAGACTGCAACTACTCAACCCAATTCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTCCAGAAGGGAAAAGAGTTTCAGTTTGCACAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCAGCTTCACAGCAAAAGGGATATTGGTACAGACACAACCGACGTTCCTTTAAAACACCTGATGGCCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCTATGCTGGCGCAGAGTATGGCGACGATATCGAAGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAGGACCTCTGCCGATATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTATTGCCTCAAGGTTTTTATGTTGAAGGCTCAGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGCCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCTAAGCAAGTAACAAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCCCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCCCCAACAGCTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGGACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAGAATCAAGATGGTGGTGCAGATGTAGTGAGCCCTAAGCCTCAGAGAAAGAGAGGGACAAAGCAAAAGGCTCAGAAA------GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCTGAGGATCGCAGCCTTCTGGCTCAGATCCTAGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >UNKNOWN_AC_000192_N_YP_209238_1_NA_NA_Unknown_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGCGGGTTAAATAATCAAAATAGAGGCAGAAAGAATCAGCCCAAGCAGACTGCAACTACTCAACCCAATTCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTCCAGAAGGGAAAAGAGTTTCAGTTTGCACAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCAGCTTCACAGCAAAAGGGATATTGGTACAGACACAACCGACGTTCCTTTAAAACACCTGATGGCCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCTATGCTGGCGCAGAGTATGGCGACGATATCGAAGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGAGACTAGGACCTCTGCCGATATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTATTGCCTCAAGGTTTTTATGTTGAAGGCTCAGGAAGGTCTGCACCTGCTAGTCGATCTGGTTCGCGGCCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCTAAGCAAGTAACAAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCCCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCCCCAACAGCTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGGACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAGAATCAAGATGGTGGTGCAGATGTAGTGAGCCCTAAGCCTCAGAGAAAGAGAGGGACAAAGCAAAAGGCTCAGAAA------GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAGTTAACCCCTGAGGATCGCAGCCTTCTGGCTCAGATCCTAGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >inf_MHV_A59_NA_ACN89754_1_NA_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTGGCAGAAGCTCCTCTGTAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAACTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAGTTCCAAAAGGGAAAGGAGTTTCAGTTTGCAGAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGCCGTTCTTTTAAAACACCTGATGGGCAGCAGAAGCAATTACTGCCCAGATGGTATTTTTACTATCTTGGCACAGGGCCCCATGCTGGAGCCAGTTATGGAGACAGCATTGAAGGTGTCTTCTGGGTTGCAAACAGCCAAGCGGACACCAATACCCGCTCTGATATTGTCGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTTGAAGGCTCTGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACGAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCTCCAACAGTTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTGGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTCAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >repA59_RJHM_NA_ACN89716_1_NA_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTAGCAGAAGCTCCTCTGGAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGCGGGTTAAATAATCAAAATAGAGGCAGAAGGAATCAGCCCAAGCAGACTGCAACTACTCAACCCAATTCCGGGAGTGTGGTTCCCCATTACTCTTGGTTTTCGGGCATTACCCAATTCCAGAAGGGAAAAGAGTTTCAGTTTGCACAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCAGCTTCACAGCAAAAGGGATATTGGTACAGACACAACCGACGTTCCTTTAAAACACCTGATGGCCAGCAGAAGCAGCTACTGCCCAGATGGTATTTTTACTATCTTGGAACAGGGCCCTATGCTGGCGCAGAGTATGGCGACGATATCGAAGGAGTTGTCTGGGTCGCAAGCCAACAGGCCGACACTAGGACCTCTGCCGATATTGTTGAAAGGGACCCAAGTAGCCATGAGGCTATTCCTACTAGGTTTGCGCCCGGTACGGTATTGCCTCAAGGTTTTTATGTTGAAGGCTCAGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGCCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCTAAGCAAGTAACAAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGTCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCCCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCCCCAACAGCTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAACTCTGGTGGTGCTGATGGACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAGAATCAAGATGGTGGTGCAGATGTAGTGAGCCCTAAGCCTCAGAGAAAGAGAGGGACAAAGCAAAAGGCTCAGAAA------GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCTGAGGATCGCAGCCTTCTGGCTCAGATCCTAGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG >repJHM_RA59_NA_ACN89774_1_NA_USA_Mouse_Murine_coronavirus ATGTCTTTTGTTCCTGGGCAAGAAAATGCCGGTGGCAGAAGCTCCTCTGTAAACCGCGCTGGTAATGGAATCCTCAAGAAGACCACTTGGGCTGACCAAACCGAGCGTGGACCAAATAATCAAAATAGAGGCAGAAGGAATCAGCCAAAGCAGACTGCAACTACTCAACCCAACTCCGGGAGTGTGGTTCCCCATTACTCCTGGTTTTCTGGCATTACCCAGTTCCAAAAGGGAAAGGAGTTTCAGTTTGCAGAAGGACAAGGAGTGCCTATTGCCAATGGAATCCCCGCTTCAGAGCAAAAGGGATATTGGTATAGACACAACCGCCGTTCTTTTAAAACACCTGATGGGCAGCAGAAGCAATTACTGCCCAGATGGTATTTTTACTATCTTGGCACAGGGCCCCATGCTGGAGCCAGTTATGGAGACAGCATTGAAGGTGTCTTCTGGGTTGCAAACAGCCAAGCGGACACCAATACCCGCTCTGATATTGTCGAAAGGGACCCAAGCAGTCATGAGGCTATTCCTACTAGGTTTGCGCCCGGCACGGTATTGCCTCAGGGCTTTTATGTTGAAGGCTCTGGAAGGTCTGCACCTGCTAGCCGATCTGGTTCGCGGTCACAATCCCGTGGGCCAAATAATCGCGCTAGAAGCAGTTCCAACCAGCGCCAGCCTGCCTCTACTGTAAAACCTGATATGGCCGAAGAAATTGCTGCTCTTGTTTTGGCTAAGCTCGGTAAAGATGCCGGCCAGCCCAAGCAAGTAACGAAGCAAAGTGCCAAAGAAGTCAGGCAGAAAATTTTAAACAAGCCTCGCCAAAAGAGGACTCCAAACAAGCAGTGCCCAGTGCAGCAGTGTTTTGGAAAGAGAGGCCCCAATCAGAATTTTGGAGGCTCTGAAATGTTAAAACTTGGAACTAGTGATCCACAGTTCCCCATTCTTGCAGAGTTGGCTCCAACAGTTGGTGCCTTCTTCTTTGGATCTAAATTAGAATTGGTCAAAAAGAATTCTGGTGGTGCTGATGAACCCACCAAAGATGTGTATGAGCTGCAATATTCAGGTGCAGTTAGATTTGATAGTACTCTACCTGGTTTTGAGACTATCATGAAAGTGTTGAATGAGAATTTGAATGCCTACCAG---AAGGATGGTGGTGCAGATGTGGTGAGCCCAAAGCCCCAAAGAAAA---GGGCGTAGACAGGCTCAGGAAAAGAAA---GATGAAGTAGATAATGTAAGCGTTGCAAAGCCCAAAAGCTCTGTGCAGCGAAATGTAAGTAGAGAATTAACCCCAGAGGATAGAAGTCTGTTGGCTCAGATCCTTGATGATGGCGTAGTGCCAGATGGGTTAGAAGATGACTCTAATGTG
>8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGQNNGNRGRRNQPK QTATTQPNTGSVVPHYSWFSGITQFQKGKEFQFAGGQGVPIANGIPSSEQ KGYWYRHNRRSFKTPGGQQKQLLPRWYFYYLGTGPHAGASFGDSIEGVFW VANSQADTNTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQAASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE MLKLGTSDPQFPILAELAPTPGAFFFGSKLELVKKNSGGVDEPTKDVYEL HYSGAVRFDSTLSGFETIMKVLNENLNAYQNQAGGVDVVSPKPQRKRGTK QTAQK--EELDSISVAQPKSAVQRNVSRELTPEDRSLLAQILDDGVVPDG L-DDSNV >JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG VEDDSNV >MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus MSFVPGQENAGSRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIDGVVW VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADDPTKDVYEL QYSGAIRFDSTLPGFETIMKVLNENLDAYQDQAGGADVVSPKPQRKRGTK QKALK--GEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR QAQEKK-DEVDNVSVAKPKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus MSFVPGQENAGSRSSFGNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFKFADGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIDGVVW VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRSRSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQDQAGGADVVSPKPQRKRGQR QVAQKKNDEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QAKEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >MHV_BHKR_lab_USA_infA59_H126A_2012_N_AGT17721_1_2012_10_25_USA_Mouse_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >MHV_BHKR_lab_USA_icA59_L94P_2012_N_AGT17743_1_2012_10_25_USA_Mouse_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >MHV_BHKR_lab_USA_icA59_ns2M_2012_N_AGT17754_1_2012_10_25_USA_Mouse_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >MHV_JHM_IA_NA_ACN89761_1_NA_USA_Mouse_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >MHV_S_3239_17_NA_AFD97608_1_NA_NA_Unknown_Murine_coronavirus MSFVPGQENAGSRSSSGSRSGNGILKKTTWADQTERAGNNGNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFVQGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >MHV_MI_NC_BAJ04701_1_1994_Australia_Mouse_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQLNSGSVVPHYSWFSGITQFQKGKQFQFAEGQGVPIANGIPATEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDNIEGVVW VASHQADTKTSADIVERDPSSHEAIPTRFAPGTVIPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE MLKLGTNDPQFPILAELVPTPGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQKESGGVDVVSPKPQRK-GRR QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSKV >ML_10_ORF7_AAF69349_1_NA_NA_Unknown_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QALEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >ML_11_orf7_AAF68926_1_NA_NA_Unknown_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR QAQEKK-DEVDNVSVAKLKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >Parker_N_YP_003029852_1_NA_NA_Rat_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGQNNGNRGRRNQPK QTATTQPNTGSVVPHYSWFSGITQFQKGKEFQFAGGQGVPIANGIPSSEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASFGDSIEGVFW VANSQADTNTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE MLKLGTSDPQFPILAELAPTPGAFFFGSKLELVKKNSGGVDEPTKDVYEL HYSGAVRFDSTLSGFETIMKVLNENLNAYQNQAGGVDVVSPKPQRKRGTK QTAQK--EELDSISVAQPKSAVQRNVSRELTPEDRSLLAQILDDGVVPDG L-DDSNV >Penn_97_1_ORF7_AAF69338_1_NA_NA_Unknown_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERG----NRGRRNHPK QTATTQPNAGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIASGIPASEQ KGYWYRHNRRSFKTPDGQHKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW VASQQADTKTTADVVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASAVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILTKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTPSAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAIRFDSTLPGFETIMKVLTENLNAYQDQAGSVDLVSPKPPRR-GRR QAQEKK-DEVDNVSVAKPKSLVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >RA59_R13_NA_ACN89686_1_2006_01_01_USA_Mouse_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >RA59_SJHM_NA_ACN89710_1_NA_USA_Mouse_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >RJHM_A_NA_ACN89697_1_NA_USA_Mouse_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >S_N_ADI59793_1_NA_USA_Mouse_Murine_coronavirus MSFVPGQENAGSRSSSGSRSGNGILKKTTWADQTERAGNNGNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFVQGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGAEYGDDIEGVVW VASQQADTKTTADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >SA59_RJHM_NA_ACN89733_1_NA_USA_Mouse_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >UNKNOWN_AC_000192_N_YP_209238_1_NA_NA_Unknown_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRKNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW VASQQAETRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >inf_MHV_A59_NA_ACN89754_1_NA_USA_Mouse_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >repA59_RJHM_NA_ACN89716_1_NA_USA_Mouse_Murine_coronavirus MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAQGQGVPIANGIPASQQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPYAGAEYGDDIEGVVW VASQQADTRTSADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPE MLKLGTSDPQFPILAELAPTAGAFFFGSKLELVKKNSGGADGPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK QKAQK--DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV >repJHM_RA59_NA_ACN89774_1_NA_USA_Mouse_Murine_coronavirus MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPK QTATTQPNSGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQ KGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFW VANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPA SRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAALVLAKLGKDAG QPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSE MLKLGTSDPQFPILAELAPTVGAFFFGSKLELVKKNSGGADEPTKDVYEL QYSGAVRFDSTLPGFETIMKVLNENLNAYQ-KDGGADVVSPKPQRK-GRR QAQEKK-DEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDG LEDDSNV
Reading sequence file /data//pss_subsets/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/fasta/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1
Found 28 sequences of length 1371
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 5.3%
Found 198 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0% 75.6%100.0%
Using a window size of 80 with k as 12
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 152 polymorphic sites
**p-Value(s)**
----------
NSS: 0.00e+00 (1000 permutations)
Max Chi^2: 0.00e+00 (1000 permutations)
PHI (Permutation): 0.00e+00 (1000 permutations)
PHI (Normal): 1.46e-32
#NEXUS
[ID: 8497089588]
begin taxa;
dimensions ntax=28;
taxlabels
8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus
MHV_BHKR_lab_USA_infA59_H126A_2012_N_AGT17721_1_2012_10_25_USA_Mouse_Murine_coronavirus
MHV_BHKR_lab_USA_icA59_L94P_2012_N_AGT17743_1_2012_10_25_USA_Mouse_Murine_coronavirus
MHV_BHKR_lab_USA_icA59_ns2M_2012_N_AGT17754_1_2012_10_25_USA_Mouse_Murine_coronavirus
MHV_JHM_IA_NA_ACN89761_1_NA_USA_Mouse_Murine_coronavirus
MHV_S_3239_17_NA_AFD97608_1_NA_NA_Unknown_Murine_coronavirus
MHV_MI_NC_BAJ04701_1_1994_Australia_Mouse_Murine_coronavirus
ML_10_ORF7_AAF69349_1_NA_NA_Unknown_Murine_coronavirus
ML_11_orf7_AAF68926_1_NA_NA_Unknown_Murine_coronavirus
Parker_N_YP_003029852_1_NA_NA_Rat_Murine_coronavirus
Penn_97_1_ORF7_AAF69338_1_NA_NA_Unknown_Murine_coronavirus
JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus
RA59_R13_NA_ACN89686_1_2006_01_01_USA_Mouse_Murine_coronavirus
RA59_SJHM_NA_ACN89710_1_NA_USA_Mouse_Murine_coronavirus
RJHM_A_NA_ACN89697_1_NA_USA_Mouse_Murine_coronavirus
S_N_ADI59793_1_NA_USA_Mouse_Murine_coronavirus
SA59_RJHM_NA_ACN89733_1_NA_USA_Mouse_Murine_coronavirus
UNKNOWN_AC_000192_N_YP_209238_1_NA_NA_Unknown_Murine_coronavirus
inf_MHV_A59_NA_ACN89754_1_NA_USA_Mouse_Murine_coronavirus
repA59_RJHM_NA_ACN89716_1_NA_USA_Mouse_Murine_coronavirus
repJHM_RA59_NA_ACN89774_1_NA_USA_Mouse_Murine_coronavirus
A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus
JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus
MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus
MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus
MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus
MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus
MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus
;
end;
begin trees;
translate
1 8190_NA_AFG25761_1_NA_NA_Rat_Murine_coronavirus,
2 MHV_BHKR_lab_USA_infA59_H126A_2012_N_AGT17721_1_2012_10_25_USA_Mouse_Murine_coronavirus,
3 MHV_BHKR_lab_USA_icA59_L94P_2012_N_AGT17743_1_2012_10_25_USA_Mouse_Murine_coronavirus,
4 MHV_BHKR_lab_USA_icA59_ns2M_2012_N_AGT17754_1_2012_10_25_USA_Mouse_Murine_coronavirus,
5 MHV_JHM_IA_NA_ACN89761_1_NA_USA_Mouse_Murine_coronavirus,
6 MHV_S_3239_17_NA_AFD97608_1_NA_NA_Unknown_Murine_coronavirus,
7 MHV_MI_NC_BAJ04701_1_1994_Australia_Mouse_Murine_coronavirus,
8 ML_10_ORF7_AAF69349_1_NA_NA_Unknown_Murine_coronavirus,
9 ML_11_orf7_AAF68926_1_NA_NA_Unknown_Murine_coronavirus,
10 Parker_N_YP_003029852_1_NA_NA_Rat_Murine_coronavirus,
11 Penn_97_1_ORF7_AAF69338_1_NA_NA_Unknown_Murine_coronavirus,
12 JHM_WU_N_AFO11522_1_1947_08_14_USA_Unknown_Murine_coronavirus,
13 RA59_R13_NA_ACN89686_1_2006_01_01_USA_Mouse_Murine_coronavirus,
14 RA59_SJHM_NA_ACN89710_1_NA_USA_Mouse_Murine_coronavirus,
15 RJHM_A_NA_ACN89697_1_NA_USA_Mouse_Murine_coronavirus,
16 S_N_ADI59793_1_NA_USA_Mouse_Murine_coronavirus,
17 SA59_RJHM_NA_ACN89733_1_NA_USA_Mouse_Murine_coronavirus,
18 UNKNOWN_AC_000192_N_YP_209238_1_NA_NA_Unknown_Murine_coronavirus,
19 inf_MHV_A59_NA_ACN89754_1_NA_USA_Mouse_Murine_coronavirus,
20 repA59_RJHM_NA_ACN89716_1_NA_USA_Mouse_Murine_coronavirus,
21 repJHM_RA59_NA_ACN89774_1_NA_USA_Mouse_Murine_coronavirus,
22 A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus,
23 JHM_WU_Dns2_N_AFO11512_1_1947_08_14_USA_Unknown_Murine_coronavirus,
24 MHV_1_NA_ACN89735_1_NA_USA_Mouse_Murine_coronavirus,
25 MHV_2_NA_AAF19389_1_NA_NA_Unknown_Murine_coronavirus,
26 MHV_A59_N_NP_045302_1_NA_NA_Unknown_Murine_coronavirus,
27 MHV_3_NA_ACN89747_1_NA_USA_Mouse_Murine_coronavirus,
28 MHV_BHKR_lab_USA_icA59_17Cl1_2012_N_AGT17732_1_2012_10_25_USA_Mouse_Murine_coronavirus
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:2.770984e-03,10:6.202043e-04,(((2:5.585955e-04,3:5.277139e-04,4:5.558853e-04,13:5.258229e-04,14:5.277806e-04,19:5.218973e-04,21:5.366493e-04,22:5.438274e-04,26:5.631968e-04,28:1.275280e-03)0.875:2.759301e-03,8:2.540695e-03)1.000:2.470896e-02,((((((5:5.427483e-04,12:5.280870e-04,(15:5.234705e-04,17:5.334712e-04,20:5.605207e-04)0.935:1.333378e-03,18:2.805779e-03,23:1.277118e-03)1.000:2.645611e-02,24:1.817040e-02)0.947:1.000043e-02,27:1.510891e-02)0.956:1.203725e-02,(6:5.536140e-04,16:1.316481e-03)1.000:2.037481e-02)0.862:5.467337e-03,(9:1.254089e-03,11:5.454173e-04,25:5.078398e-04)1.000:5.580742e-02)0.824:5.715154e-03,7:3.409871e-02)0.956:2.543535e-02)1.000:8.383028e-02);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:2.770984e-03,10:6.202043e-04,(((2:5.585955e-04,3:5.277139e-04,4:5.558853e-04,13:5.258229e-04,14:5.277806e-04,19:5.218973e-04,21:5.366493e-04,22:5.438274e-04,26:5.631968e-04,28:1.275280e-03):2.759301e-03,8:2.540695e-03):2.470896e-02,((((((5:5.427483e-04,12:5.280870e-04,(15:5.234705e-04,17:5.334712e-04,20:5.605207e-04):1.333378e-03,18:2.805779e-03,23:1.277118e-03):2.645611e-02,24:1.817040e-02):1.000043e-02,27:1.510891e-02):1.203725e-02,(6:5.536140e-04,16:1.316481e-03):2.037481e-02):5.467337e-03,(9:1.254089e-03,11:5.454173e-04,25:5.078398e-04):5.580742e-02):5.715154e-03,7:3.409871e-02):2.543535e-02):8.383028e-02);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -3869.65 -3904.55
2 -3868.58 -3899.09
--------------------------------------
TOTAL -3868.98 -3903.86
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.386375 0.001207 0.319355 0.454040 0.384673 1463.71 1477.01 1.000
r(A<->C){all} 0.109955 0.000379 0.071825 0.147197 0.109103 766.41 918.47 1.000
r(A<->G){all} 0.201559 0.000648 0.154314 0.253705 0.200145 733.66 822.17 1.000
r(A<->T){all} 0.104238 0.000332 0.069147 0.138403 0.102974 999.87 1003.10 1.000
r(C<->G){all} 0.077197 0.000305 0.045082 0.112202 0.076303 943.82 1031.00 1.000
r(C<->T){all} 0.416027 0.001219 0.347101 0.482212 0.415141 841.48 936.28 1.000
r(G<->T){all} 0.091026 0.000313 0.058024 0.125933 0.090258 991.54 1001.78 1.000
pi(A){all} 0.287452 0.000133 0.265887 0.310046 0.287191 962.91 999.62 1.000
pi(C){all} 0.225132 0.000118 0.204524 0.245924 0.224819 1078.99 1123.62 1.000
pi(G){all} 0.257576 0.000125 0.234792 0.279393 0.257527 961.90 1055.43 1.000
pi(T){all} 0.229840 0.000118 0.208852 0.250381 0.229962 971.64 1000.09 1.000
alpha{1,2} 0.272416 0.006495 0.128714 0.442231 0.262834 743.99 820.19 1.001
alpha{3} 2.765530 1.988988 0.547599 5.645226 2.468158 893.46 984.79 1.000
pinvar{all} 0.553128 0.004358 0.420921 0.664547 0.563265 630.76 632.10 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\ ***************** TYPES OF STANDARD ANALYSES ***************** (1) Selection Analyses (2) Evolutionary Hypothesis Testing (3) Relative evolutionary rate inference (4) Coevolutionary analysis (5) Basic Analyses (6) Codon Selection Analyses (7) Compartmentalization (8) Data File Tools (9) Miscellaneous (10) Model Comparison (11) Kernel Analysis Tools (12) Molecular Clock (13) Phylogeny Reconstruction (14) Positive Selection (15) Recombination (16) Selection/Recombination (17) Relative Rate (18) Relative Ratio (19) Substitution Rates Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' ***************** (1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution). (2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood). (3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting). (4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection). (5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification). (6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood). (7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation). Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types): Analysis Description -------------------- Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a coding sequence alignment to determine whether some sites have been subject to pervasive purifying or diversifying selection. v2.1 introduces two more methods for estimating the posterior distribution of grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation Bayes approximation (fastest). Please note that a FUBAR analysis generates a cache and a results JSON file in the same directory as directory as the original alignment. HyPhy needs to have write privileges to this directory. For example if the original file is in /home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there will also exist FUBAR-generated files /home/sergei/FUBAR/data/pol.nex.FUBAR.json, /home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide checkpointing so that a partially completed analysis can be restarted. - __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree (one per partition) - __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring selection (2013), Mol Biol Evol. 30(5):1196-205 - __Written by__: Sergei L Kosakovsky Pond - __Contact Information__: spond@temple.edu - __Analysis Version__: 2.1 ####Choose Genetic Code 1. [**Universal**] Universal code. (Genebank transl_table=1). 2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2). 3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3). 4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4). 5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5). 6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6). 7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9). 8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10). 9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12). 10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13). 11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14). 12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15). 13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16). 14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21). 15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22). 16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23). 17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24). 18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25). 19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26). >Please choose an option (or press q to cancel selection): >Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`) >A tree was found in the data file: `(C1,C18,(((C10,C11,C12,C20,C21,C26,C28,C3,C7,C9),C16),((((((C13,C2,(C22,C24,C27),C25,C4),C5),C8),(C14,C23)),(C17,C19,C6)),C15)))` >Would you like to use it (y/n)? >Loaded a multiple sequence alignment with **28** sequences, **457** codons, and **1** partitions from `/data//pss_subsets/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/results/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1.fna` > FUBAR will write cache and result files to _/data//pss_subsets/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/results/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/fubar/results/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1/A59_N_YP_009824987_1_NA_USA_Unknown_Murine_coronavirus.result.1.fna.FUBAR.json_, respectively > Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer): ####Posterior estimation method 1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation) 2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed) 3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default) >Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5): ### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model * Log(L) = -3977.29, AIC-c = 8050.70 (48 estimated parameters) * Tree length (expected substitutions/site) for partition 1 : 0.276 ### Computing the phylogenetic likelihood function on the grid * Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid * Best scaling achieved for * synonymous rate = 2.815 * non-synonymous rate = 0.500 * Computing conditional site likelihoods on a 20 x 20 rate grid ### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights * Using the following settings * Dirichlet alpha : 0.5 ### Tabulating site-level results | Codon | Partition | alpha | beta |Posterior prob for positive selection| |:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:| | 38 | 1 | 1.016 | 15.444 | Pos. posterior = 0.9691 | | 299 | 1 | 0.699 | 5.883 | Pos. posterior = 0.9541 | | 321 | 1 | 0.697 | 8.014 | Pos. posterior = 0.9700 | | 383 | 1 | 0.729 | 9.286 | Pos. posterior = 0.9732 | ---- ## FUBAR inferred 4 sites subject to diversifying positive selection at posterior probability >= 0.9 Of these, 0.13 are expected to be false positives (95% confidence interval of 0-1 )
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
