--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1723.41 -1751.44
2 -1725.09 -1762.03
--------------------------------------
TOTAL -1723.93 -1761.34
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.278454 0.002150 0.197059 0.370077 0.273399 1140.57 1147.04 1.000
r(A<->C){all} 0.092996 0.000925 0.036376 0.152773 0.090474 703.65 758.17 1.000
r(A<->G){all} 0.174909 0.001606 0.100721 0.253460 0.172737 511.71 559.53 1.001
r(A<->T){all} 0.115196 0.000792 0.063508 0.169976 0.112912 583.77 660.81 1.000
r(C<->G){all} 0.049873 0.000589 0.009831 0.097470 0.046484 756.34 811.66 1.000
r(C<->T){all} 0.491558 0.003065 0.388644 0.601727 0.491349 576.73 661.67 1.000
r(G<->T){all} 0.075469 0.000570 0.031498 0.121974 0.073378 1003.61 1009.11 1.001
pi(A){all} 0.251780 0.000252 0.219644 0.282200 0.251250 1074.50 1088.92 1.000
pi(C){all} 0.197140 0.000200 0.170667 0.224480 0.196575 1054.29 1073.91 1.000
pi(G){all} 0.220141 0.000225 0.190812 0.249680 0.219958 1022.58 1072.94 1.001
pi(T){all} 0.330939 0.000293 0.296875 0.363192 0.330799 1040.25 1082.97 1.000
alpha{1,2} 0.423856 0.100276 0.092590 1.024055 0.337611 894.25 1041.18 1.000
alpha{3} 1.641628 0.996135 0.253113 3.712646 1.417858 859.44 901.26 1.000
pinvar{all} 0.621447 0.008037 0.446644 0.763536 0.636635 332.39 531.73 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
-- Starting log on Wed Nov 02 20:10:57 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.08 sec, SCORE=1000, Nseq=26, Len=228
C1 MSSTTPAPQTVYQWTADVAVRFLKEWNFLLGIILLFITIILQFGYTSRSM
C2 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C3 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C4 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C5 MTSTTQAPQPVYQWTADEAIRFLKEWNFSLGIILLFVTIILQFGYTSRSM
C6 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C7 MSSTTQAPEPVYLWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C8 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C9 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C10 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C11 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C12 MSSTTPAPQPVYQWTADEAVRFLKEWNFSLGIILLFVTIILQFGYTSRSM
C13 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C14 MSSTTPAPQPIYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C15 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C16 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C17 MSSTTSAPQTVYQWTADVAVRFLKEWNFLLGIILLFITIILQFGYTSRSM
C18 MNSTTQAPQPVYQWTADEAIRFLKEWNFSLGIILLFVTIILQFGYTSRSM
C19 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C20 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C21 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C22 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C23 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C24 MSSTTPAPQPIYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C25 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C26 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
*.*** ** .:* **** *::******* *******:*************
C1 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C2 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C3 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C4 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C5 FVYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
C6 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C7 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C8 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C9 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C10 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C11 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C12 FIYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C13 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C14 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
C15 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C16 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C17 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C18 FVYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
C19 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C20 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C21 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C22 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C23 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C24 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
C25 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C26 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
*:******:******* ****:**********************:::***
C1 YFVNSIRLFIRTGSWWSFNPETNNLMCIDVKGTVYVRPIIEDYHTLTATN
C2 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIDDYHTLTATI
C3 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C4 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C5 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C6 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C7 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C8 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C9 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C10 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C11 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C12 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C13 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C14 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C15 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C16 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C17 YFVNSIRLFIRTGSWWSFNPETNNLMCIDVKGTVYVRPIIEDYHTLTATN
C18 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C19 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C20 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C21 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C22 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C23 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C24 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C25 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C26 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
*****************************:**********:********
C1 VRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C2 IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C3 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C4 IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C5 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C6 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C7 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C8 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C9 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C10 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C11 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C12 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C13 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C14 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C15 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C16 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C17 VRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C18 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C19 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C20 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C21 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C22 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C23 IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C24 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C25 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C26 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
:***:*********************************************
C1 AVYVKSKVGNYRLPSNKPSGADTALLRI
C2 AVYVKSKVGNYRLPSNKPSGADTVLLRI
C3 AVYVKSKVGNYRLPSNKPSGADTALLRI
C4 AVYVKSKVGNYRLPSNKPSGADTVLLRI
C5 AVYVKSKVGNYRLPSNKPSGMDTALLRI
C6 AVYVKSKVGNYRLPSNKPSGADTALLRI
C7 AVYVKSKVGNYRLPSNKPSGADTALLRI
C8 AVYVKSKVGNYRLPSNKPSGADTALLRT
C9 AVYVKSKVGNYRLPSNKPSGADTALLRI
C10 AVYVKSKVGNYRLPSNKPSGADTALLRT
C11 AVYVKSKVGNYRLPSNKPSGADTALLRI
C12 AIYVKSKVGNYRLPSNKPSGSDTALLRI
C13 AVYVKSKVGNYRLPSNKPSGADTALLRT
C14 AVYVKSKVGNYRLPSNKPSGADTALLRI
C15 AVYVKSKVGNYRLPSNKPSGADTALLRT
C16 AVYVKSKVGNYRLPSNKPSGADTALLRI
C17 AVYVKSKVGNYRLPSNKPSGADTALLRI
C18 AVYVKSKVGNYRLPSNKPSGMDTALLRI
C19 AVYVKSKVGNYRLPSNKPSGADTALLRT
C20 AVYVKSKVGNYRLPSNKPSGADTALLRI
C21 AVYVKSKVGNYRLPSNKPSGADTALLRT
C22 AVYVKSKVGNYRLPSNKPSGADTALLRI
C23 AVYVKSKVGNYRLPSNKPSGADTVLLRI
C24 AVYVKSKVGNYRLPSNKPSGADTALLRI
C25 AVYVKSKVGNYRLPSNKPSGADTALLRT
C26 AVYVKSKVGNYRLPSNKPSGADTALLRI
*:****************** **.***
-- Starting log on Wed Nov 02 20:13:15 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.20 sec, SCORE=1000, Nseq=26, Len=228
C1 MSSTTPAPQTVYQWTADVAVRFLKEWNFLLGIILLFITIILQFGYTSRSM
C2 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C3 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C4 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C5 MTSTTQAPQPVYQWTADEAIRFLKEWNFSLGIILLFVTIILQFGYTSRSM
C6 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C7 MSSTTQAPEPVYLWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C8 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C9 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C10 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C11 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C12 MSSTTPAPQPVYQWTADEAVRFLKEWNFSLGIILLFVTIILQFGYTSRSM
C13 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C14 MSSTTPAPQPIYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C15 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C16 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C17 MSSTTSAPQTVYQWTADVAVRFLKEWNFLLGIILLFITIILQFGYTSRSM
C18 MNSTTQAPQPVYQWTADEAIRFLKEWNFSLGIILLFVTIILQFGYTSRSM
C19 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C20 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C21 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C22 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C23 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C24 MSSTTPAPQPIYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C25 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C26 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
*.*** ** .:* **** *::******* *******:*************
C1 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C2 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C3 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C4 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C5 FVYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
C6 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C7 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C8 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C9 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C10 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C11 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C12 FIYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C13 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C14 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
C15 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C16 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C17 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C18 FVYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
C19 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C20 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C21 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C22 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C23 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C24 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
C25 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C26 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
*:******:******* ****:**********************:::***
C1 YFVNSIRLFIRTGSWWSFNPETNNLMCIDVKGTVYVRPIIEDYHTLTATN
C2 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIDDYHTLTATI
C3 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C4 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C5 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C6 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C7 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C8 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C9 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C10 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C11 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C12 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C13 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C14 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C15 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C16 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C17 YFVNSIRLFIRTGSWWSFNPETNNLMCIDVKGTVYVRPIIEDYHTLTATN
C18 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C19 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C20 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C21 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C22 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C23 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C24 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C25 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C26 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
*****************************:**********:********
C1 VRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C2 IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C3 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C4 IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C5 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C6 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C7 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C8 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C9 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C10 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C11 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C12 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C13 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C14 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C15 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C16 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C17 VRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C18 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C19 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C20 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C21 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C22 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C23 IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C24 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C25 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C26 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
:***:*********************************************
C1 AVYVKSKVGNYRLPSNKPSGADTALLRI
C2 AVYVKSKVGNYRLPSNKPSGADTVLLRI
C3 AVYVKSKVGNYRLPSNKPSGADTALLRI
C4 AVYVKSKVGNYRLPSNKPSGADTVLLRI
C5 AVYVKSKVGNYRLPSNKPSGMDTALLRI
C6 AVYVKSKVGNYRLPSNKPSGADTALLRI
C7 AVYVKSKVGNYRLPSNKPSGADTALLRI
C8 AVYVKSKVGNYRLPSNKPSGADTALLRT
C9 AVYVKSKVGNYRLPSNKPSGADTALLRI
C10 AVYVKSKVGNYRLPSNKPSGADTALLRT
C11 AVYVKSKVGNYRLPSNKPSGADTALLRI
C12 AIYVKSKVGNYRLPSNKPSGSDTALLRI
C13 AVYVKSKVGNYRLPSNKPSGADTALLRT
C14 AVYVKSKVGNYRLPSNKPSGADTALLRI
C15 AVYVKSKVGNYRLPSNKPSGADTALLRT
C16 AVYVKSKVGNYRLPSNKPSGADTALLRI
C17 AVYVKSKVGNYRLPSNKPSGADTALLRI
C18 AVYVKSKVGNYRLPSNKPSGMDTALLRI
C19 AVYVKSKVGNYRLPSNKPSGADTALLRT
C20 AVYVKSKVGNYRLPSNKPSGADTALLRI
C21 AVYVKSKVGNYRLPSNKPSGADTALLRT
C22 AVYVKSKVGNYRLPSNKPSGADTALLRI
C23 AVYVKSKVGNYRLPSNKPSGADTVLLRI
C24 AVYVKSKVGNYRLPSNKPSGADTALLRI
C25 AVYVKSKVGNYRLPSNKPSGADTALLRT
C26 AVYVKSKVGNYRLPSNKPSGADTALLRI
*:****************** **.***
-- Starting log on Wed Nov 02 20:10:57 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.08 sec, SCORE=1000, Nseq=26, Len=228
C1 MSSTTPAPQTVYQWTADVAVRFLKEWNFLLGIILLFITIILQFGYTSRSM
C2 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C3 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C4 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C5 MTSTTQAPQPVYQWTADEAIRFLKEWNFSLGIILLFVTIILQFGYTSRSM
C6 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C7 MSSTTQAPEPVYLWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C8 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C9 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C10 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C11 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C12 MSSTTPAPQPVYQWTADEAVRFLKEWNFSLGIILLFVTIILQFGYTSRSM
C13 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C14 MSSTTPAPQPIYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C15 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C16 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C17 MSSTTSAPQTVYQWTADVAVRFLKEWNFLLGIILLFITIILQFGYTSRSM
C18 MNSTTQAPQPVYQWTADEAIRFLKEWNFSLGIILLFVTIILQFGYTSRSM
C19 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C20 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C21 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C22 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C23 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C24 MSSTTPAPQPIYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C25 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
C26 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
*.*** ** .:* **** *::******* *******:*************
C1 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C2 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C3 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C4 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C5 FVYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
C6 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C7 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C8 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C9 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C10 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C11 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C12 FIYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C13 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C14 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
C15 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C16 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C17 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
C18 FVYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
C19 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C20 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C21 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C22 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C23 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
C24 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
C25 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
C26 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
*:******:******* ****:**********************:::***
C1 YFVNSIRLFIRTGSWWSFNPETNNLMCIDVKGTVYVRPIIEDYHTLTATN
C2 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIDDYHTLTATI
C3 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C4 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C5 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C6 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C7 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C8 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C9 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C10 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C11 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C12 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C13 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C14 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C15 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C16 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C17 YFVNSIRLFIRTGSWWSFNPETNNLMCIDVKGTVYVRPIIEDYHTLTATN
C18 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C19 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C20 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C21 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C22 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C23 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C24 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C25 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
C26 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
*****************************:**********:********
C1 VRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C2 IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C3 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C4 IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C5 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C6 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C7 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C8 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C9 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C10 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C11 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C12 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C13 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C14 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C15 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C16 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C17 VRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C18 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C19 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C20 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C21 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C22 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C23 IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C24 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C25 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
C26 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
:***:*********************************************
C1 AVYVKSKVGNYRLPSNKPSGADTALLRI
C2 AVYVKSKVGNYRLPSNKPSGADTVLLRI
C3 AVYVKSKVGNYRLPSNKPSGADTALLRI
C4 AVYVKSKVGNYRLPSNKPSGADTVLLRI
C5 AVYVKSKVGNYRLPSNKPSGMDTALLRI
C6 AVYVKSKVGNYRLPSNKPSGADTALLRI
C7 AVYVKSKVGNYRLPSNKPSGADTALLRI
C8 AVYVKSKVGNYRLPSNKPSGADTALLRT
C9 AVYVKSKVGNYRLPSNKPSGADTALLRI
C10 AVYVKSKVGNYRLPSNKPSGADTALLRT
C11 AVYVKSKVGNYRLPSNKPSGADTALLRI
C12 AIYVKSKVGNYRLPSNKPSGSDTALLRI
C13 AVYVKSKVGNYRLPSNKPSGADTALLRT
C14 AVYVKSKVGNYRLPSNKPSGADTALLRI
C15 AVYVKSKVGNYRLPSNKPSGADTALLRT
C16 AVYVKSKVGNYRLPSNKPSGADTALLRI
C17 AVYVKSKVGNYRLPSNKPSGADTALLRI
C18 AVYVKSKVGNYRLPSNKPSGMDTALLRI
C19 AVYVKSKVGNYRLPSNKPSGADTALLRT
C20 AVYVKSKVGNYRLPSNKPSGADTALLRI
C21 AVYVKSKVGNYRLPSNKPSGADTALLRT
C22 AVYVKSKVGNYRLPSNKPSGADTALLRI
C23 AVYVKSKVGNYRLPSNKPSGADTVLLRI
C24 AVYVKSKVGNYRLPSNKPSGADTALLRI
C25 AVYVKSKVGNYRLPSNKPSGADTALLRT
C26 AVYVKSKVGNYRLPSNKPSGADTALLRI
*:****************** **.***
-- Starting log on Wed Nov 02 21:23:51 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/gapped_alignment/fubar,A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 26 taxa and 684 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C11
Taxon 4 -> C12
Taxon 5 -> C13
Taxon 6 -> C14
Taxon 7 -> C15
Taxon 8 -> C16
Taxon 9 -> C17
Taxon 10 -> C18
Taxon 11 -> C19
Taxon 12 -> C2
Taxon 13 -> C20
Taxon 14 -> C21
Taxon 15 -> C22
Taxon 16 -> C23
Taxon 17 -> C24
Taxon 18 -> C25
Taxon 19 -> C26
Taxon 20 -> C3
Taxon 21 -> C4
Taxon 22 -> C5
Taxon 23 -> C6
Taxon 24 -> C7
Taxon 25 -> C8
Taxon 26 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1667424233
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 745383203
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 8584231841
Seed = 934078796
Swapseed = 1667424233
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 21 unique site patterns
Division 2 has 16 unique site patterns
Division 3 has 54 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -3198.275999 -- 74.568658
Chain 2 -- -3202.780190 -- 74.568658
Chain 3 -- -3206.514991 -- 74.568658
Chain 4 -- -3111.994036 -- 74.568658
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -3013.238566 -- 74.568658
Chain 2 -- -2996.137426 -- 74.568658
Chain 3 -- -3154.770212 -- 74.568658
Chain 4 -- -3176.243641 -- 74.568658
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-3198.276] (-3202.780) (-3206.515) (-3111.994) * [-3013.239] (-2996.137) (-3154.770) (-3176.244)
1000 -- [-1788.933] (-1795.830) (-1829.071) (-1793.193) * (-1822.747) (-1793.280) (-1833.755) [-1793.993] -- 0:16:39
2000 -- (-1760.889) (-1775.258) (-1765.175) [-1746.787] * (-1751.682) [-1753.255] (-1766.478) (-1762.324) -- 0:16:38
3000 -- [-1761.764] (-1749.406) (-1768.307) (-1752.713) * (-1743.102) [-1746.403] (-1766.509) (-1754.965) -- 0:11:04
4000 -- [-1737.540] (-1740.378) (-1746.027) (-1777.390) * (-1743.189) [-1730.645] (-1744.437) (-1749.014) -- 0:12:27
5000 -- (-1743.258) (-1735.925) (-1746.018) [-1744.747] * [-1738.238] (-1746.169) (-1746.904) (-1754.335) -- 0:13:16
Average standard deviation of split frequencies: 0.087462
6000 -- (-1738.513) (-1739.584) [-1728.462] (-1753.134) * (-1749.354) (-1758.699) (-1758.215) [-1742.489] -- 0:11:02
7000 -- [-1739.295] (-1742.458) (-1740.125) (-1746.964) * (-1758.615) (-1750.736) (-1738.027) [-1733.508] -- 0:11:49
8000 -- (-1745.765) (-1729.481) (-1737.644) [-1751.144] * [-1745.891] (-1754.320) (-1743.980) (-1744.520) -- 0:12:24
9000 -- (-1741.163) (-1752.193) (-1736.328) [-1740.369] * [-1740.186] (-1741.298) (-1761.707) (-1739.045) -- 0:12:50
10000 -- (-1744.609) (-1738.040) (-1746.037) [-1726.639] * (-1732.475) [-1729.135] (-1752.010) (-1739.055) -- 0:11:33
Average standard deviation of split frequencies: 0.068241
11000 -- (-1723.145) (-1744.316) (-1763.100) [-1731.915] * [-1732.040] (-1744.681) (-1749.987) (-1741.431) -- 0:11:59
12000 -- (-1732.579) (-1745.509) (-1749.698) [-1726.504] * [-1734.914] (-1741.088) (-1737.205) (-1725.315) -- 0:12:21
13000 -- (-1739.802) (-1736.703) [-1737.708] (-1737.780) * [-1747.238] (-1748.660) (-1745.490) (-1737.629) -- 0:11:23
14000 -- (-1741.878) [-1734.969] (-1741.957) (-1737.203) * (-1737.773) (-1742.680) (-1752.058) [-1739.874] -- 0:11:44
15000 -- (-1741.642) (-1738.240) (-1733.076) [-1731.652] * [-1735.862] (-1741.016) (-1746.030) (-1732.758) -- 0:12:02
Average standard deviation of split frequencies: 0.060533
16000 -- (-1740.834) (-1754.833) [-1722.795] (-1742.584) * (-1741.226) (-1747.822) (-1745.624) [-1737.289] -- 0:11:16
17000 -- (-1744.331) (-1743.994) [-1726.963] (-1740.514) * [-1726.036] (-1758.853) (-1750.644) (-1742.681) -- 0:11:33
18000 -- (-1751.820) [-1742.675] (-1742.022) (-1744.840) * [-1729.334] (-1763.776) (-1740.695) (-1734.887) -- 0:11:49
19000 -- (-1736.321) [-1735.864] (-1743.821) (-1756.250) * [-1730.548] (-1732.201) (-1740.875) (-1742.166) -- 0:11:11
20000 -- (-1731.384) [-1741.886] (-1746.429) (-1740.949) * [-1751.965] (-1753.922) (-1770.791) (-1737.083) -- 0:11:26
Average standard deviation of split frequencies: 0.050083
21000 -- (-1739.746) [-1733.930] (-1742.667) (-1743.984) * (-1744.408) [-1737.298] (-1746.752) (-1744.087) -- 0:11:39
22000 -- (-1751.929) [-1734.214] (-1745.345) (-1743.116) * (-1743.752) [-1744.247] (-1746.876) (-1738.082) -- 0:11:51
23000 -- (-1743.551) [-1731.545] (-1746.633) (-1736.360) * [-1749.248] (-1755.275) (-1747.200) (-1747.815) -- 0:11:19
24000 -- (-1738.963) [-1734.675] (-1748.163) (-1749.780) * (-1759.653) (-1754.112) [-1741.541] (-1757.898) -- 0:11:31
25000 -- (-1757.072) (-1739.095) (-1723.861) [-1732.676] * (-1744.577) (-1745.950) [-1739.598] (-1750.647) -- 0:11:42
Average standard deviation of split frequencies: 0.049391
26000 -- (-1749.660) (-1746.364) [-1734.278] (-1738.443) * (-1749.965) (-1733.549) [-1730.281] (-1739.952) -- 0:11:14
27000 -- (-1744.527) (-1730.419) (-1744.787) [-1743.615] * [-1735.757] (-1729.385) (-1755.910) (-1736.014) -- 0:11:24
28000 -- (-1733.242) [-1736.367] (-1737.949) (-1743.576) * (-1742.123) (-1737.452) [-1740.671] (-1749.537) -- 0:11:34
29000 -- (-1748.199) [-1744.117] (-1736.361) (-1736.778) * (-1740.369) [-1740.903] (-1733.599) (-1742.816) -- 0:11:09
30000 -- [-1734.853] (-1741.663) (-1737.085) (-1746.987) * (-1737.701) (-1738.320) (-1750.323) [-1733.657] -- 0:11:19
Average standard deviation of split frequencies: 0.048776
31000 -- (-1744.603) [-1745.494] (-1735.932) (-1725.932) * [-1747.868] (-1736.954) (-1751.633) (-1742.349) -- 0:11:27
32000 -- [-1737.028] (-1747.013) (-1744.864) (-1743.923) * (-1744.012) [-1729.197] (-1749.058) (-1755.984) -- 0:11:35
33000 -- (-1752.082) (-1756.245) [-1725.891] (-1742.932) * [-1730.591] (-1735.538) (-1744.394) (-1773.210) -- 0:11:13
34000 -- [-1738.440] (-1760.127) (-1744.521) (-1735.686) * (-1722.334) (-1736.260) (-1743.611) [-1748.595] -- 0:11:21
35000 -- [-1741.379] (-1738.878) (-1756.674) (-1738.319) * [-1728.681] (-1737.109) (-1753.730) (-1743.510) -- 0:11:29
Average standard deviation of split frequencies: 0.042365
36000 -- (-1738.878) [-1747.353] (-1745.559) (-1750.833) * [-1726.390] (-1738.050) (-1733.977) (-1752.643) -- 0:11:09
37000 -- (-1762.111) [-1729.650] (-1726.330) (-1733.716) * (-1732.657) [-1741.662] (-1750.969) (-1750.724) -- 0:11:16
38000 -- (-1741.223) [-1735.984] (-1743.363) (-1747.552) * (-1742.173) (-1737.333) (-1757.905) [-1732.352] -- 0:11:23
39000 -- (-1737.539) [-1722.948] (-1746.320) (-1729.384) * (-1730.643) [-1732.497] (-1749.471) (-1745.789) -- 0:11:05
40000 -- (-1740.313) (-1741.845) [-1724.959] (-1742.152) * [-1735.595] (-1740.413) (-1732.927) (-1750.901) -- 0:11:12
Average standard deviation of split frequencies: 0.036995
41000 -- (-1731.222) (-1750.793) (-1737.243) [-1736.834] * (-1757.222) (-1740.807) (-1748.005) [-1736.237] -- 0:11:18
42000 -- (-1734.202) (-1752.327) (-1754.592) [-1734.004] * (-1732.787) (-1749.606) (-1755.388) [-1736.368] -- 0:11:01
43000 -- (-1737.993) (-1767.555) (-1745.430) [-1738.530] * (-1741.934) (-1747.935) (-1759.337) [-1726.175] -- 0:11:07
44000 -- (-1731.673) (-1741.056) [-1737.611] (-1738.418) * (-1766.057) [-1737.007] (-1739.612) (-1752.702) -- 0:11:13
45000 -- (-1738.998) (-1743.854) (-1756.924) [-1741.946] * (-1740.450) [-1736.908] (-1741.818) (-1749.355) -- 0:11:19
Average standard deviation of split frequencies: 0.032871
46000 -- (-1732.494) [-1723.306] (-1751.659) (-1724.918) * (-1745.761) (-1734.971) [-1735.818] (-1748.726) -- 0:11:03
47000 -- (-1737.292) (-1741.708) (-1749.603) [-1751.628] * (-1751.122) [-1728.612] (-1742.499) (-1747.476) -- 0:11:09
48000 -- (-1735.503) (-1725.700) (-1745.347) [-1739.502] * (-1744.414) (-1754.845) (-1736.961) [-1744.115] -- 0:11:14
49000 -- (-1752.819) (-1730.374) (-1755.227) [-1747.164] * (-1749.272) (-1737.607) (-1743.686) [-1748.875] -- 0:10:59
50000 -- [-1734.178] (-1732.175) (-1727.035) (-1740.437) * (-1747.567) (-1755.742) (-1747.435) [-1729.859] -- 0:11:05
Average standard deviation of split frequencies: 0.029344
51000 -- [-1738.197] (-1742.241) (-1744.655) (-1736.006) * [-1740.165] (-1735.954) (-1748.783) (-1736.267) -- 0:11:09
52000 -- (-1739.738) (-1737.110) (-1745.932) [-1729.957] * [-1741.304] (-1733.939) (-1741.981) (-1739.370) -- 0:10:56
53000 -- (-1742.354) [-1735.067] (-1753.231) (-1757.153) * (-1736.298) [-1737.078] (-1746.175) (-1737.256) -- 0:11:01
54000 -- (-1733.284) (-1747.959) (-1746.619) [-1738.412] * (-1752.560) [-1735.636] (-1741.218) (-1732.369) -- 0:11:05
55000 -- [-1740.935] (-1748.855) (-1732.146) (-1740.663) * (-1752.020) [-1742.305] (-1734.966) (-1748.981) -- 0:10:52
Average standard deviation of split frequencies: 0.027895
56000 -- (-1753.161) (-1742.079) [-1736.074] (-1740.629) * (-1764.655) [-1731.966] (-1740.431) (-1737.543) -- 0:10:57
57000 -- (-1737.203) (-1755.134) (-1746.296) [-1725.556] * (-1742.742) (-1749.362) (-1761.753) [-1726.480] -- 0:11:01
58000 -- (-1737.182) (-1751.762) (-1745.251) [-1734.642] * (-1746.444) (-1738.712) (-1736.596) [-1731.328] -- 0:10:49
59000 -- (-1746.630) (-1740.905) [-1730.720] (-1755.197) * (-1741.885) (-1724.674) (-1737.717) [-1736.791] -- 0:10:53
60000 -- [-1741.422] (-1757.409) (-1745.021) (-1729.370) * (-1742.807) (-1746.726) [-1740.498] (-1739.997) -- 0:10:58
Average standard deviation of split frequencies: 0.025056
61000 -- (-1761.543) (-1760.265) (-1735.715) [-1745.776] * (-1746.793) (-1739.349) (-1752.887) [-1734.522] -- 0:11:01
62000 -- [-1735.491] (-1751.620) (-1738.207) (-1745.800) * (-1748.501) (-1749.503) [-1736.067] (-1750.976) -- 0:10:50
63000 -- [-1734.835] (-1763.772) (-1751.130) (-1744.568) * (-1737.317) [-1740.235] (-1740.719) (-1746.322) -- 0:10:54
64000 -- [-1720.036] (-1758.895) (-1741.067) (-1751.390) * (-1748.930) [-1737.398] (-1737.198) (-1752.706) -- 0:10:58
65000 -- [-1722.562] (-1738.700) (-1731.239) (-1728.348) * (-1735.419) (-1744.379) [-1724.761] (-1751.805) -- 0:10:47
Average standard deviation of split frequencies: 0.025064
66000 -- (-1740.280) (-1750.492) (-1735.385) [-1728.721] * (-1750.852) (-1747.358) (-1741.531) [-1740.447] -- 0:10:50
67000 -- (-1757.824) (-1759.082) [-1738.310] (-1739.235) * [-1736.251] (-1740.444) (-1742.392) (-1752.664) -- 0:10:54
68000 -- (-1738.889) (-1758.463) (-1739.307) [-1729.260] * (-1742.271) [-1736.815] (-1731.257) (-1738.061) -- 0:10:44
69000 -- (-1736.729) (-1736.394) [-1737.362] (-1743.615) * (-1750.661) (-1741.533) [-1737.024] (-1748.721) -- 0:10:47
70000 -- [-1723.508] (-1742.195) (-1733.693) (-1743.699) * (-1751.488) [-1731.733] (-1733.746) (-1735.223) -- 0:10:51
Average standard deviation of split frequencies: 0.027290
71000 -- (-1735.290) [-1729.194] (-1735.509) (-1757.472) * (-1760.771) (-1738.316) [-1727.415] (-1736.718) -- 0:10:41
72000 -- [-1740.256] (-1740.439) (-1725.532) (-1742.514) * (-1747.554) (-1729.593) [-1735.716] (-1748.723) -- 0:10:44
73000 -- (-1747.590) (-1743.086) [-1724.335] (-1748.022) * (-1748.085) (-1738.638) [-1733.846] (-1735.072) -- 0:10:47
74000 -- (-1746.612) (-1742.144) [-1740.426] (-1732.818) * (-1764.133) (-1733.114) [-1743.530] (-1740.328) -- 0:10:38
75000 -- (-1743.484) (-1741.649) [-1730.467] (-1727.250) * [-1738.283] (-1738.692) (-1744.698) (-1746.061) -- 0:10:41
Average standard deviation of split frequencies: 0.027971
76000 -- (-1747.303) (-1747.456) [-1728.957] (-1739.747) * (-1738.808) [-1741.373] (-1736.584) (-1757.954) -- 0:10:44
77000 -- [-1739.915] (-1750.603) (-1741.135) (-1742.662) * [-1730.936] (-1741.077) (-1737.931) (-1752.930) -- 0:10:35
78000 -- (-1740.905) [-1732.599] (-1750.502) (-1751.050) * (-1748.371) (-1731.855) [-1729.752] (-1748.527) -- 0:10:38
79000 -- (-1736.560) [-1736.161] (-1748.427) (-1739.203) * (-1743.834) (-1739.199) [-1734.649] (-1730.210) -- 0:10:41
80000 -- (-1738.533) (-1739.348) [-1741.075] (-1751.097) * [-1736.134] (-1742.318) (-1740.435) (-1749.348) -- 0:10:32
Average standard deviation of split frequencies: 0.028862
81000 -- (-1749.247) (-1739.452) [-1738.808] (-1738.685) * (-1747.731) (-1732.462) (-1733.568) [-1739.428] -- 0:10:35
82000 -- (-1756.102) (-1746.995) (-1740.938) [-1733.097] * (-1753.121) (-1742.080) (-1740.620) [-1733.055] -- 0:10:38
83000 -- (-1734.772) [-1725.617] (-1742.429) (-1756.465) * (-1749.065) (-1735.005) (-1746.025) [-1738.661] -- 0:10:29
84000 -- (-1745.609) [-1731.546] (-1739.184) (-1758.304) * (-1755.350) (-1742.619) (-1753.130) [-1728.660] -- 0:10:32
85000 -- (-1743.362) (-1736.809) (-1742.350) [-1735.823] * (-1741.384) (-1728.305) (-1738.796) [-1730.286] -- 0:10:35
Average standard deviation of split frequencies: 0.029199
86000 -- (-1742.693) [-1730.684] (-1766.109) (-1729.480) * (-1738.317) [-1740.538] (-1757.105) (-1744.789) -- 0:10:27
87000 -- (-1748.953) [-1733.465] (-1751.978) (-1744.743) * (-1753.343) [-1744.373] (-1744.077) (-1735.087) -- 0:10:29
88000 -- (-1736.151) [-1739.417] (-1751.219) (-1744.713) * [-1736.399] (-1742.312) (-1753.223) (-1732.514) -- 0:10:32
89000 -- [-1738.610] (-1736.539) (-1743.153) (-1760.529) * (-1732.269) (-1738.564) [-1731.043] (-1760.921) -- 0:10:24
90000 -- [-1733.924] (-1744.993) (-1748.877) (-1745.938) * [-1742.180] (-1752.776) (-1735.049) (-1744.685) -- 0:10:26
Average standard deviation of split frequencies: 0.030260
91000 -- (-1737.633) [-1740.564] (-1744.727) (-1743.177) * (-1744.641) (-1759.777) (-1733.470) [-1720.305] -- 0:10:29
92000 -- [-1739.730] (-1733.077) (-1756.370) (-1757.010) * (-1748.569) (-1747.350) (-1743.454) [-1726.878] -- 0:10:21
93000 -- (-1745.527) (-1738.208) [-1732.530] (-1752.039) * (-1749.820) [-1746.245] (-1745.999) (-1732.640) -- 0:10:24
94000 -- [-1755.395] (-1752.922) (-1752.095) (-1731.778) * (-1742.720) [-1727.071] (-1733.946) (-1747.668) -- 0:10:26
95000 -- (-1740.552) [-1734.970] (-1764.985) (-1745.120) * [-1725.254] (-1749.342) (-1733.338) (-1738.915) -- 0:10:19
Average standard deviation of split frequencies: 0.028031
96000 -- (-1739.552) [-1736.145] (-1763.818) (-1749.833) * [-1737.686] (-1755.011) (-1743.980) (-1746.424) -- 0:10:21
97000 -- [-1728.091] (-1758.330) (-1737.847) (-1746.796) * (-1742.035) (-1750.190) [-1739.609] (-1751.752) -- 0:10:23
98000 -- (-1734.832) (-1748.872) [-1738.075] (-1755.829) * (-1759.536) (-1743.309) [-1731.054] (-1752.643) -- 0:10:25
99000 -- (-1734.649) (-1751.450) (-1746.894) [-1729.974] * (-1743.919) [-1733.116] (-1733.412) (-1739.849) -- 0:10:18
100000 -- (-1736.147) (-1745.854) (-1731.644) [-1736.999] * (-1752.628) [-1742.064] (-1749.074) (-1733.406) -- 0:10:21
Average standard deviation of split frequencies: 0.026048
101000 -- [-1737.257] (-1747.420) (-1734.250) (-1747.206) * (-1748.779) (-1736.857) (-1741.875) [-1723.224] -- 0:10:23
102000 -- [-1741.823] (-1754.842) (-1731.946) (-1739.867) * [-1736.182] (-1746.722) (-1743.999) (-1726.789) -- 0:10:16
103000 -- (-1725.601) [-1743.367] (-1737.399) (-1750.200) * (-1739.337) (-1734.627) (-1738.004) [-1733.058] -- 0:10:18
104000 -- (-1731.893) (-1740.123) [-1733.104] (-1760.761) * (-1754.470) (-1757.778) [-1741.592] (-1736.207) -- 0:10:20
105000 -- (-1734.734) (-1751.737) [-1740.861] (-1743.306) * (-1743.677) (-1747.112) (-1743.167) [-1726.412] -- 0:10:13
Average standard deviation of split frequencies: 0.022792
106000 -- (-1751.040) [-1743.571] (-1739.076) (-1753.356) * (-1754.167) (-1742.862) (-1746.200) [-1734.256] -- 0:10:15
107000 -- (-1744.782) (-1746.275) (-1748.108) [-1742.565] * (-1742.946) (-1742.597) [-1736.562] (-1729.321) -- 0:10:17
108000 -- (-1742.485) (-1756.007) (-1752.696) [-1742.208] * (-1744.746) [-1729.474] (-1739.679) (-1738.178) -- 0:10:11
109000 -- (-1750.258) (-1737.173) (-1736.207) [-1735.175] * [-1725.720] (-1746.268) (-1746.990) (-1758.894) -- 0:10:13
110000 -- (-1746.600) (-1740.892) (-1724.429) [-1730.644] * [-1737.140] (-1758.338) (-1729.953) (-1759.790) -- 0:10:14
Average standard deviation of split frequencies: 0.022429
111000 -- [-1732.594] (-1752.949) (-1744.855) (-1733.433) * [-1733.097] (-1762.166) (-1751.026) (-1729.486) -- 0:10:08
112000 -- (-1751.180) (-1750.436) (-1736.663) [-1726.115] * [-1733.681] (-1765.597) (-1752.754) (-1734.042) -- 0:10:10
113000 -- (-1729.166) (-1748.319) (-1735.249) [-1725.826] * (-1744.189) (-1743.116) (-1752.011) [-1735.557] -- 0:10:12
114000 -- (-1732.947) [-1737.788] (-1743.329) (-1748.969) * (-1745.670) (-1742.120) (-1769.876) [-1739.207] -- 0:10:06
115000 -- (-1752.516) [-1728.138] (-1742.060) (-1763.493) * (-1761.888) [-1728.411] (-1734.582) (-1732.653) -- 0:10:07
Average standard deviation of split frequencies: 0.023305
116000 -- (-1741.496) (-1746.640) (-1745.443) [-1740.170] * [-1726.261] (-1741.947) (-1749.327) (-1745.266) -- 0:10:09
117000 -- (-1743.977) (-1733.212) (-1744.011) [-1741.718] * [-1736.604] (-1741.293) (-1745.815) (-1735.789) -- 0:10:03
118000 -- (-1739.828) (-1737.931) [-1738.754] (-1744.647) * (-1752.629) (-1735.486) (-1745.646) [-1741.080] -- 0:10:05
119000 -- (-1736.675) [-1735.282] (-1730.774) (-1744.704) * [-1742.110] (-1754.036) (-1739.533) (-1743.861) -- 0:10:07
120000 -- [-1743.664] (-1735.431) (-1751.790) (-1737.569) * (-1734.641) (-1734.081) [-1741.041] (-1752.296) -- 0:10:01
Average standard deviation of split frequencies: 0.023191
121000 -- [-1741.351] (-1727.985) (-1733.599) (-1734.440) * [-1744.900] (-1741.773) (-1744.552) (-1737.257) -- 0:10:02
122000 -- (-1746.089) (-1732.543) (-1763.671) [-1738.014] * [-1731.839] (-1746.202) (-1746.433) (-1726.312) -- 0:10:04
123000 -- (-1752.933) [-1735.044] (-1739.123) (-1735.652) * (-1756.411) (-1756.577) (-1742.776) [-1737.857] -- 0:09:58
124000 -- (-1744.220) [-1726.114] (-1747.278) (-1733.236) * (-1748.623) (-1731.222) (-1746.890) [-1752.575] -- 0:10:00
125000 -- (-1736.110) [-1732.634] (-1746.703) (-1743.104) * (-1747.980) (-1745.535) [-1735.327] (-1745.955) -- 0:10:02
Average standard deviation of split frequencies: 0.021550
126000 -- (-1766.891) (-1755.415) [-1754.076] (-1770.645) * (-1743.185) (-1744.013) [-1738.749] (-1754.116) -- 0:10:03
127000 -- (-1737.537) (-1735.317) [-1738.410] (-1753.019) * (-1757.265) (-1746.532) (-1770.938) [-1742.587] -- 0:09:58
128000 -- (-1762.024) [-1732.823] (-1729.337) (-1743.145) * [-1745.903] (-1738.097) (-1758.843) (-1738.706) -- 0:09:59
129000 -- (-1741.036) (-1745.644) [-1724.511] (-1755.656) * (-1747.403) (-1738.205) (-1735.610) [-1724.515] -- 0:10:00
130000 -- [-1738.075] (-1749.005) (-1740.247) (-1739.254) * (-1753.087) [-1738.265] (-1732.413) (-1735.433) -- 0:09:55
Average standard deviation of split frequencies: 0.021867
131000 -- (-1735.739) (-1741.920) [-1730.384] (-1733.226) * (-1745.634) (-1744.038) (-1745.374) [-1736.035] -- 0:09:57
132000 -- [-1743.967] (-1759.331) (-1746.879) (-1730.678) * (-1751.882) (-1735.407) (-1732.241) [-1729.477] -- 0:09:58
133000 -- (-1750.585) (-1755.673) [-1747.112] (-1747.825) * (-1734.067) (-1737.543) (-1746.002) [-1732.161] -- 0:09:53
134000 -- (-1744.748) [-1732.874] (-1742.880) (-1731.114) * (-1750.564) [-1733.787] (-1760.043) (-1732.629) -- 0:09:54
135000 -- (-1768.877) [-1727.728] (-1749.810) (-1736.005) * (-1742.531) (-1740.156) [-1730.966] (-1751.747) -- 0:09:55
Average standard deviation of split frequencies: 0.021447
136000 -- (-1743.865) (-1730.433) [-1729.246] (-1751.716) * (-1748.234) (-1739.648) [-1729.197] (-1737.971) -- 0:09:50
137000 -- (-1748.573) (-1754.595) [-1737.818] (-1732.295) * (-1737.940) (-1739.535) [-1736.891] (-1757.274) -- 0:09:52
138000 -- (-1752.301) (-1743.499) [-1738.711] (-1732.042) * (-1735.036) (-1739.921) [-1737.444] (-1742.818) -- 0:09:53
139000 -- (-1735.824) (-1733.893) [-1740.678] (-1740.098) * (-1751.630) (-1720.407) [-1737.321] (-1742.793) -- 0:09:48
140000 -- (-1747.488) (-1732.737) [-1747.242] (-1739.089) * (-1731.025) (-1753.016) [-1744.364] (-1752.708) -- 0:09:49
Average standard deviation of split frequencies: 0.021890
141000 -- (-1735.891) [-1723.699] (-1759.407) (-1744.443) * [-1735.194] (-1735.859) (-1753.243) (-1749.485) -- 0:09:50
142000 -- (-1739.695) [-1743.712] (-1750.423) (-1748.621) * (-1736.924) (-1745.501) (-1746.822) [-1735.238] -- 0:09:46
143000 -- (-1742.011) (-1747.095) (-1738.873) [-1755.138] * (-1741.048) (-1726.997) (-1764.834) [-1729.864] -- 0:09:47
144000 -- (-1745.619) (-1761.706) (-1732.746) [-1743.494] * (-1747.038) (-1746.758) (-1745.044) [-1738.283] -- 0:09:48
145000 -- (-1752.291) (-1737.481) [-1735.859] (-1753.728) * (-1741.743) [-1730.442] (-1746.584) (-1747.817) -- 0:09:43
Average standard deviation of split frequencies: 0.020382
146000 -- (-1738.774) [-1743.950] (-1734.009) (-1738.572) * (-1734.326) (-1745.789) (-1739.519) [-1734.574] -- 0:09:44
147000 -- (-1758.606) (-1738.835) [-1744.974] (-1748.508) * (-1732.876) (-1729.607) (-1741.488) [-1738.884] -- 0:09:46
148000 -- (-1746.143) (-1735.221) [-1740.549] (-1740.519) * (-1731.792) (-1748.524) [-1737.148] (-1739.422) -- 0:09:47
149000 -- [-1737.932] (-1742.877) (-1740.586) (-1761.141) * (-1741.442) (-1729.889) [-1727.064] (-1739.431) -- 0:09:42
150000 -- (-1749.199) (-1743.330) [-1731.964] (-1748.489) * (-1736.495) (-1747.031) (-1748.371) [-1731.795] -- 0:09:43
Average standard deviation of split frequencies: 0.021835
151000 -- (-1755.892) (-1756.325) (-1749.251) [-1734.028] * [-1735.869] (-1739.715) (-1739.023) (-1743.444) -- 0:09:44
152000 -- (-1750.679) (-1743.908) (-1739.610) [-1740.442] * (-1743.950) (-1731.852) (-1738.628) [-1730.028] -- 0:09:40
153000 -- (-1738.482) (-1751.327) [-1735.444] (-1741.570) * (-1749.888) [-1744.245] (-1752.034) (-1737.713) -- 0:09:41
154000 -- (-1749.366) (-1740.847) (-1738.949) [-1731.443] * (-1754.879) (-1739.071) [-1739.148] (-1744.009) -- 0:09:42
155000 -- [-1735.733] (-1752.702) (-1756.812) (-1740.554) * (-1738.247) [-1733.926] (-1742.263) (-1741.033) -- 0:09:37
Average standard deviation of split frequencies: 0.020233
156000 -- (-1742.039) [-1730.631] (-1738.271) (-1731.850) * (-1737.419) [-1734.486] (-1753.850) (-1734.382) -- 0:09:38
157000 -- (-1737.527) (-1740.093) [-1741.383] (-1759.969) * [-1730.179] (-1751.986) (-1755.320) (-1750.159) -- 0:09:39
158000 -- [-1740.948] (-1739.119) (-1740.072) (-1754.919) * (-1736.933) [-1736.036] (-1740.111) (-1743.727) -- 0:09:35
159000 -- (-1746.547) [-1747.935] (-1734.972) (-1738.175) * (-1741.891) [-1735.841] (-1742.976) (-1741.091) -- 0:09:36
160000 -- (-1745.655) (-1742.507) (-1733.102) [-1736.201] * (-1732.009) (-1748.953) (-1733.885) [-1740.365] -- 0:09:37
Average standard deviation of split frequencies: 0.019709
161000 -- (-1755.845) (-1732.036) [-1725.613] (-1738.640) * (-1727.993) [-1745.845] (-1753.240) (-1736.022) -- 0:09:38
162000 -- (-1755.272) (-1738.530) (-1742.226) [-1731.224] * (-1730.153) [-1739.281] (-1763.807) (-1740.298) -- 0:09:34
163000 -- (-1748.885) [-1733.513] (-1736.250) (-1744.820) * (-1738.471) (-1760.196) (-1759.671) [-1733.232] -- 0:09:35
164000 -- (-1731.751) (-1738.177) [-1736.325] (-1734.194) * [-1733.628] (-1746.586) (-1735.278) (-1738.032) -- 0:09:36
165000 -- (-1751.778) [-1734.130] (-1739.337) (-1733.829) * [-1734.559] (-1732.645) (-1739.446) (-1739.534) -- 0:09:31
Average standard deviation of split frequencies: 0.019456
166000 -- (-1737.202) (-1739.076) (-1747.095) [-1733.901] * (-1750.320) [-1730.863] (-1733.705) (-1752.886) -- 0:09:32
167000 -- (-1737.104) [-1739.295] (-1724.073) (-1752.809) * (-1742.468) [-1738.939] (-1757.892) (-1747.324) -- 0:09:33
168000 -- (-1735.280) (-1743.433) [-1726.701] (-1753.356) * (-1747.227) (-1735.913) (-1741.799) [-1728.089] -- 0:09:29
169000 -- [-1738.734] (-1754.200) (-1726.750) (-1743.519) * (-1746.365) (-1748.633) [-1737.743] (-1745.657) -- 0:09:30
170000 -- (-1743.770) (-1731.137) [-1729.939] (-1747.878) * (-1735.678) (-1745.847) (-1740.300) [-1736.100] -- 0:09:31
Average standard deviation of split frequencies: 0.018169
171000 -- [-1729.955] (-1755.971) (-1752.278) (-1742.578) * (-1751.264) (-1742.600) (-1736.897) [-1735.994] -- 0:09:27
172000 -- [-1750.333] (-1736.521) (-1748.641) (-1747.655) * (-1750.314) (-1736.338) [-1747.815] (-1749.756) -- 0:09:28
173000 -- [-1739.506] (-1731.414) (-1745.933) (-1748.264) * (-1736.835) (-1749.017) [-1744.402] (-1766.442) -- 0:09:28
174000 -- [-1730.325] (-1750.592) (-1737.718) (-1748.831) * (-1746.159) (-1742.944) [-1735.201] (-1766.364) -- 0:09:29
175000 -- [-1728.274] (-1752.109) (-1745.263) (-1750.399) * (-1727.975) [-1731.976] (-1741.116) (-1757.994) -- 0:09:25
Average standard deviation of split frequencies: 0.017566
176000 -- (-1745.167) [-1740.428] (-1734.196) (-1753.971) * [-1733.008] (-1738.741) (-1754.901) (-1735.154) -- 0:09:26
177000 -- (-1745.123) (-1730.317) [-1731.088] (-1750.483) * (-1737.434) [-1726.743] (-1743.553) (-1733.954) -- 0:09:27
178000 -- (-1735.117) [-1731.155] (-1744.021) (-1730.623) * (-1740.379) (-1750.570) (-1735.287) [-1751.791] -- 0:09:23
179000 -- (-1747.875) [-1731.244] (-1745.136) (-1742.818) * (-1744.265) (-1756.047) (-1733.403) [-1727.064] -- 0:09:24
180000 -- (-1739.814) [-1742.394] (-1736.993) (-1752.592) * (-1745.818) (-1750.404) (-1756.972) [-1731.256] -- 0:09:24
Average standard deviation of split frequencies: 0.018143
181000 -- (-1749.491) [-1736.497] (-1767.787) (-1745.243) * (-1740.310) (-1746.263) [-1744.856] (-1736.110) -- 0:09:21
182000 -- (-1739.400) [-1731.896] (-1744.593) (-1748.335) * (-1741.895) [-1742.105] (-1736.525) (-1759.493) -- 0:09:21
183000 -- [-1750.246] (-1738.326) (-1753.306) (-1752.908) * (-1739.691) [-1731.718] (-1747.757) (-1744.094) -- 0:09:22
184000 -- (-1744.156) (-1738.565) [-1747.282] (-1758.875) * (-1727.232) (-1737.271) [-1727.416] (-1750.813) -- 0:09:18
185000 -- [-1731.686] (-1736.237) (-1734.134) (-1744.821) * [-1742.991] (-1754.251) (-1743.722) (-1740.350) -- 0:09:19
Average standard deviation of split frequencies: 0.016609
186000 -- (-1746.352) (-1743.744) [-1741.828] (-1753.412) * (-1747.720) (-1737.625) (-1741.315) [-1741.317] -- 0:09:20
187000 -- (-1721.737) (-1744.793) [-1729.493] (-1753.082) * (-1758.165) (-1744.276) [-1729.285] (-1742.776) -- 0:09:16
188000 -- (-1751.723) (-1749.358) [-1726.865] (-1740.151) * (-1777.784) (-1747.095) [-1734.386] (-1753.694) -- 0:09:17
189000 -- (-1753.298) (-1744.778) [-1731.305] (-1724.020) * (-1745.430) (-1742.141) (-1738.566) [-1734.356] -- 0:09:17
190000 -- [-1728.422] (-1733.217) (-1743.539) (-1725.870) * (-1740.359) (-1745.345) (-1763.475) [-1741.002] -- 0:09:14
Average standard deviation of split frequencies: 0.016662
191000 -- (-1739.002) (-1733.627) [-1751.464] (-1737.252) * (-1740.107) (-1757.184) [-1735.104] (-1766.055) -- 0:09:14
192000 -- (-1747.026) [-1738.367] (-1745.517) (-1743.600) * (-1736.159) [-1731.594] (-1748.529) (-1750.455) -- 0:09:15
193000 -- (-1749.057) (-1742.639) [-1730.326] (-1747.667) * (-1739.640) (-1749.546) (-1741.859) [-1728.093] -- 0:09:11
194000 -- (-1748.970) [-1733.349] (-1742.759) (-1746.117) * (-1729.921) [-1733.941] (-1739.959) (-1738.786) -- 0:09:12
195000 -- (-1740.804) [-1738.575] (-1740.474) (-1737.779) * (-1735.650) (-1743.164) [-1736.758] (-1736.533) -- 0:09:13
Average standard deviation of split frequencies: 0.017103
196000 -- [-1741.503] (-1745.749) (-1747.739) (-1748.577) * [-1746.043] (-1737.377) (-1746.036) (-1735.085) -- 0:09:13
197000 -- (-1748.740) (-1744.408) (-1736.688) [-1744.464] * (-1743.939) (-1747.603) (-1748.131) [-1728.746] -- 0:09:10
198000 -- (-1735.831) [-1724.997] (-1749.901) (-1743.187) * (-1726.994) (-1739.829) [-1734.397] (-1738.689) -- 0:09:10
199000 -- (-1744.544) (-1741.066) [-1738.575] (-1750.573) * (-1754.323) (-1720.783) [-1731.186] (-1737.331) -- 0:09:11
200000 -- (-1748.056) (-1738.290) (-1737.434) [-1742.046] * (-1750.320) [-1736.032] (-1744.024) (-1758.004) -- 0:09:08
Average standard deviation of split frequencies: 0.016663
201000 -- (-1751.325) (-1735.778) (-1745.597) [-1732.599] * (-1742.313) [-1727.177] (-1736.610) (-1755.961) -- 0:09:08
202000 -- [-1734.083] (-1728.420) (-1759.792) (-1742.330) * (-1757.527) (-1734.263) (-1730.593) [-1727.472] -- 0:09:09
203000 -- (-1741.150) (-1736.394) (-1740.256) [-1734.068] * (-1736.685) [-1739.716] (-1751.745) (-1731.979) -- 0:09:05
204000 -- (-1755.976) (-1732.749) (-1740.297) [-1737.391] * (-1744.643) (-1749.104) [-1727.045] (-1741.678) -- 0:09:06
205000 -- (-1747.916) (-1742.136) (-1738.488) [-1732.609] * (-1732.090) (-1752.390) [-1733.846] (-1748.582) -- 0:09:06
Average standard deviation of split frequencies: 0.016218
206000 -- (-1736.397) (-1744.067) [-1746.294] (-1750.985) * (-1742.320) (-1747.312) [-1736.097] (-1753.091) -- 0:09:03
207000 -- (-1734.308) (-1737.656) [-1738.284] (-1743.784) * (-1748.341) (-1749.834) [-1735.352] (-1750.924) -- 0:09:03
208000 -- (-1757.996) [-1727.359] (-1737.294) (-1734.266) * [-1744.518] (-1744.836) (-1735.886) (-1741.058) -- 0:09:04
209000 -- (-1740.033) (-1743.650) [-1749.224] (-1738.671) * (-1747.063) (-1743.643) [-1743.273] (-1744.563) -- 0:09:01
210000 -- (-1757.055) [-1742.606] (-1751.767) (-1756.019) * (-1750.890) [-1732.106] (-1759.121) (-1734.515) -- 0:09:01
Average standard deviation of split frequencies: 0.016902
211000 -- (-1750.925) [-1729.910] (-1752.870) (-1739.429) * (-1767.161) (-1730.187) (-1737.638) [-1740.040] -- 0:09:02
212000 -- (-1738.208) (-1736.555) (-1745.758) [-1737.210] * [-1744.920] (-1755.843) (-1737.793) (-1734.969) -- 0:08:58
213000 -- (-1737.401) (-1752.349) (-1752.049) [-1727.960] * (-1740.572) (-1750.930) (-1746.078) [-1728.507] -- 0:08:59
214000 -- (-1731.891) [-1744.268] (-1738.087) (-1766.018) * (-1739.203) (-1733.785) (-1746.417) [-1728.924] -- 0:08:59
215000 -- [-1731.167] (-1741.110) (-1748.399) (-1743.590) * (-1742.802) (-1736.263) [-1739.171] (-1748.858) -- 0:08:56
Average standard deviation of split frequencies: 0.015907
216000 -- (-1746.074) (-1741.846) [-1725.351] (-1740.697) * (-1764.377) [-1733.431] (-1735.752) (-1738.293) -- 0:08:57
217000 -- [-1736.570] (-1740.921) (-1751.321) (-1736.180) * (-1749.481) (-1727.258) [-1732.196] (-1753.932) -- 0:08:57
218000 -- [-1728.541] (-1736.132) (-1729.847) (-1743.674) * (-1737.370) [-1736.268] (-1733.366) (-1746.729) -- 0:08:54
219000 -- (-1742.174) (-1749.177) (-1734.893) [-1745.187] * (-1745.282) (-1744.816) (-1744.277) [-1739.582] -- 0:08:54
220000 -- (-1733.518) (-1742.858) (-1744.842) [-1737.730] * (-1747.401) (-1738.946) (-1741.981) [-1736.069] -- 0:08:55
Average standard deviation of split frequencies: 0.016236
221000 -- (-1743.987) [-1730.316] (-1735.820) (-1733.863) * (-1751.998) [-1738.677] (-1739.025) (-1726.809) -- 0:08:52
222000 -- (-1744.190) (-1743.063) [-1729.988] (-1744.001) * [-1733.978] (-1743.870) (-1733.340) (-1766.099) -- 0:08:52
223000 -- (-1750.225) (-1737.652) (-1737.100) [-1734.233] * [-1734.613] (-1751.296) (-1736.127) (-1749.774) -- 0:08:53
224000 -- [-1736.894] (-1754.505) (-1742.120) (-1744.588) * [-1730.437] (-1743.396) (-1735.648) (-1741.369) -- 0:08:50
225000 -- (-1735.352) (-1738.773) (-1756.707) [-1739.961] * (-1729.767) (-1763.655) (-1739.588) [-1726.438] -- 0:08:50
Average standard deviation of split frequencies: 0.016733
226000 -- (-1734.698) (-1741.831) (-1759.631) [-1730.956] * (-1748.399) (-1766.071) (-1750.837) [-1725.582] -- 0:08:50
227000 -- (-1740.768) (-1741.995) [-1742.112] (-1740.474) * (-1756.017) (-1753.181) [-1737.535] (-1743.673) -- 0:08:47
228000 -- [-1734.319] (-1744.422) (-1742.128) (-1749.552) * (-1738.601) [-1734.458] (-1735.074) (-1738.851) -- 0:08:48
229000 -- [-1738.081] (-1755.211) (-1754.207) (-1724.751) * (-1734.851) [-1728.456] (-1742.596) (-1746.151) -- 0:08:48
230000 -- (-1753.770) (-1729.087) (-1773.180) [-1729.658] * (-1732.789) [-1725.885] (-1745.511) (-1754.403) -- 0:08:48
Average standard deviation of split frequencies: 0.016907
231000 -- (-1737.402) (-1735.411) [-1734.092] (-1740.516) * (-1730.103) [-1721.224] (-1741.719) (-1736.528) -- 0:08:45
232000 -- (-1734.366) (-1729.538) (-1733.360) [-1736.620] * [-1741.809] (-1736.101) (-1752.182) (-1745.730) -- 0:08:46
233000 -- [-1730.271] (-1753.037) (-1741.002) (-1738.944) * [-1738.055] (-1766.106) (-1732.283) (-1729.815) -- 0:08:46
234000 -- (-1729.788) (-1755.678) (-1742.993) [-1731.217] * (-1751.127) (-1727.909) (-1732.022) [-1730.188] -- 0:08:47
235000 -- (-1743.100) (-1747.339) (-1727.961) [-1743.119] * (-1746.130) [-1729.887] (-1741.540) (-1751.834) -- 0:08:44
Average standard deviation of split frequencies: 0.016797
236000 -- [-1735.119] (-1738.315) (-1753.405) (-1740.003) * (-1737.279) [-1734.933] (-1752.761) (-1747.055) -- 0:08:44
237000 -- (-1733.806) [-1740.632] (-1750.497) (-1750.524) * (-1736.797) [-1733.490] (-1746.332) (-1751.320) -- 0:08:44
238000 -- (-1743.991) (-1737.294) [-1723.572] (-1741.427) * (-1726.515) (-1739.438) [-1738.289] (-1749.002) -- 0:08:41
239000 -- (-1754.829) (-1758.526) [-1736.761] (-1739.218) * [-1741.510] (-1734.421) (-1736.386) (-1750.891) -- 0:08:42
240000 -- [-1728.274] (-1767.223) (-1751.978) (-1742.486) * (-1724.831) [-1731.134] (-1738.862) (-1736.415) -- 0:08:42
Average standard deviation of split frequencies: 0.014364
241000 -- (-1746.033) (-1752.320) (-1754.038) [-1734.955] * (-1759.976) (-1728.812) (-1737.586) [-1734.251] -- 0:08:42
242000 -- (-1743.641) (-1748.760) (-1749.699) [-1742.009] * (-1746.677) (-1743.467) [-1734.217] (-1734.410) -- 0:08:39
243000 -- [-1750.279] (-1755.961) (-1747.531) (-1728.267) * [-1736.035] (-1743.756) (-1739.223) (-1738.069) -- 0:08:40
244000 -- (-1736.457) [-1731.314] (-1751.988) (-1752.314) * (-1739.724) (-1753.679) (-1740.040) [-1746.309] -- 0:08:40
245000 -- (-1752.901) [-1738.225] (-1740.414) (-1738.951) * (-1745.256) (-1734.070) [-1732.870] (-1751.196) -- 0:08:37
Average standard deviation of split frequencies: 0.014590
246000 -- (-1753.867) [-1732.102] (-1734.294) (-1754.643) * (-1746.549) (-1731.037) [-1730.903] (-1745.969) -- 0:08:37
247000 -- (-1747.650) [-1727.038] (-1743.134) (-1740.628) * (-1740.129) (-1730.766) [-1730.425] (-1738.816) -- 0:08:38
248000 -- [-1743.801] (-1739.056) (-1752.728) (-1738.916) * [-1734.973] (-1749.837) (-1752.340) (-1736.316) -- 0:08:35
249000 -- (-1750.034) [-1730.477] (-1750.211) (-1757.680) * (-1737.751) (-1728.506) (-1744.265) [-1734.227] -- 0:08:35
250000 -- (-1740.615) (-1736.902) (-1741.753) [-1737.581] * (-1744.543) (-1738.253) [-1730.016] (-1736.385) -- 0:08:36
Average standard deviation of split frequencies: 0.014703
251000 -- (-1739.688) [-1732.113] (-1732.740) (-1738.866) * [-1741.742] (-1730.279) (-1763.538) (-1747.671) -- 0:08:36
252000 -- (-1736.660) [-1737.860] (-1743.920) (-1760.769) * (-1754.687) [-1743.191] (-1759.330) (-1748.625) -- 0:08:33
253000 -- [-1739.468] (-1731.694) (-1745.411) (-1761.606) * [-1742.347] (-1744.914) (-1747.791) (-1756.969) -- 0:08:33
254000 -- (-1745.506) [-1736.348] (-1731.100) (-1769.793) * (-1744.541) [-1732.180] (-1748.671) (-1733.692) -- 0:08:33
255000 -- (-1740.681) (-1740.982) (-1746.161) [-1741.766] * [-1735.014] (-1734.230) (-1741.323) (-1743.009) -- 0:08:31
Average standard deviation of split frequencies: 0.015301
256000 -- (-1742.102) (-1756.416) [-1742.045] (-1742.502) * (-1737.240) (-1745.378) [-1747.146] (-1743.954) -- 0:08:31
257000 -- [-1723.933] (-1753.630) (-1738.179) (-1730.653) * (-1737.740) [-1731.689] (-1731.418) (-1745.240) -- 0:08:31
258000 -- [-1724.466] (-1738.196) (-1733.877) (-1738.943) * (-1740.600) (-1748.438) [-1726.270] (-1748.865) -- 0:08:29
259000 -- (-1741.589) (-1749.455) [-1727.766] (-1771.911) * (-1746.043) (-1750.840) (-1764.444) [-1728.738] -- 0:08:29
260000 -- (-1752.937) (-1760.011) [-1728.241] (-1743.176) * (-1750.744) (-1742.289) (-1748.892) [-1744.427] -- 0:08:29
Average standard deviation of split frequencies: 0.015129
261000 -- (-1746.654) [-1735.020] (-1745.534) (-1744.885) * (-1739.999) [-1732.445] (-1731.195) (-1742.180) -- 0:08:26
262000 -- [-1746.692] (-1749.545) (-1740.418) (-1746.349) * (-1735.739) [-1731.062] (-1726.114) (-1752.586) -- 0:08:27
263000 -- (-1749.663) [-1740.505] (-1749.900) (-1758.096) * [-1729.111] (-1749.325) (-1739.863) (-1753.448) -- 0:08:27
264000 -- (-1762.433) [-1723.732] (-1745.817) (-1735.431) * (-1735.375) (-1731.160) [-1738.895] (-1742.308) -- 0:08:24
265000 -- (-1742.254) (-1744.129) (-1747.601) [-1731.021] * [-1731.949] (-1727.649) (-1743.373) (-1746.994) -- 0:08:24
Average standard deviation of split frequencies: 0.013745
266000 -- (-1748.792) (-1744.356) [-1727.598] (-1730.818) * [-1731.501] (-1745.710) (-1763.927) (-1751.383) -- 0:08:24
267000 -- [-1734.983] (-1759.259) (-1742.099) (-1737.513) * (-1742.765) (-1739.901) (-1739.581) [-1730.849] -- 0:08:22
268000 -- (-1736.638) (-1755.921) (-1746.139) [-1736.230] * (-1741.741) [-1732.476] (-1750.762) (-1746.750) -- 0:08:22
269000 -- (-1730.939) (-1740.961) (-1739.789) [-1736.224] * (-1728.684) (-1761.095) (-1758.678) [-1737.079] -- 0:08:22
270000 -- [-1718.430] (-1742.323) (-1745.038) (-1738.624) * [-1735.648] (-1745.365) (-1765.003) (-1752.600) -- 0:08:20
Average standard deviation of split frequencies: 0.014782
271000 -- [-1731.099] (-1740.396) (-1759.850) (-1728.759) * (-1725.016) [-1738.394] (-1758.053) (-1750.270) -- 0:08:20
272000 -- (-1748.338) (-1754.963) (-1744.728) [-1739.320] * [-1740.219] (-1736.195) (-1742.228) (-1743.117) -- 0:08:20
273000 -- (-1741.989) (-1764.890) (-1744.480) [-1746.616] * (-1748.763) (-1732.703) (-1738.650) [-1726.534] -- 0:08:17
274000 -- (-1735.804) (-1738.915) (-1753.009) [-1732.323] * (-1737.036) [-1724.109] (-1746.432) (-1746.997) -- 0:08:18
275000 -- (-1744.788) (-1746.855) (-1744.648) [-1726.653] * (-1732.332) [-1720.511] (-1747.292) (-1752.381) -- 0:08:18
Average standard deviation of split frequencies: 0.014347
276000 -- (-1746.902) [-1735.754] (-1754.471) (-1740.025) * (-1749.055) [-1724.250] (-1740.650) (-1747.166) -- 0:08:18
277000 -- (-1739.714) (-1735.599) [-1731.582] (-1736.010) * (-1747.562) [-1733.708] (-1751.765) (-1733.635) -- 0:08:15
278000 -- [-1738.022] (-1753.847) (-1739.572) (-1748.324) * [-1725.736] (-1739.339) (-1745.286) (-1739.695) -- 0:08:16
279000 -- (-1748.689) (-1747.176) [-1744.720] (-1747.365) * (-1735.135) [-1738.729] (-1758.475) (-1746.300) -- 0:08:16
280000 -- (-1738.935) [-1734.530] (-1735.636) (-1737.175) * [-1736.030] (-1741.631) (-1762.871) (-1736.997) -- 0:08:13
Average standard deviation of split frequencies: 0.014871
281000 -- [-1734.374] (-1731.983) (-1753.891) (-1750.265) * [-1729.960] (-1746.811) (-1755.621) (-1740.991) -- 0:08:13
282000 -- (-1741.237) [-1735.476] (-1757.550) (-1730.212) * [-1737.755] (-1745.578) (-1739.738) (-1747.383) -- 0:08:13
283000 -- [-1736.404] (-1732.052) (-1745.483) (-1742.792) * (-1739.417) [-1729.488] (-1747.535) (-1743.692) -- 0:08:11
284000 -- [-1730.086] (-1741.119) (-1747.428) (-1737.914) * (-1747.881) (-1737.116) [-1747.922] (-1747.023) -- 0:08:11
285000 -- [-1734.632] (-1751.174) (-1749.771) (-1737.220) * (-1734.299) (-1736.055) (-1743.060) [-1729.897] -- 0:08:11
Average standard deviation of split frequencies: 0.015598
286000 -- (-1748.798) [-1744.660] (-1756.745) (-1740.633) * (-1736.330) (-1751.320) (-1737.865) [-1729.966] -- 0:08:09
287000 -- (-1733.412) (-1767.406) (-1751.081) [-1735.064] * [-1736.727] (-1741.584) (-1739.680) (-1743.601) -- 0:08:09
288000 -- [-1736.732] (-1735.425) (-1750.208) (-1747.405) * (-1740.768) [-1755.738] (-1736.955) (-1739.511) -- 0:08:09
289000 -- (-1758.314) (-1747.872) [-1731.439] (-1731.780) * (-1743.948) (-1743.773) (-1740.567) [-1741.928] -- 0:08:09
290000 -- (-1746.520) (-1742.913) (-1736.760) [-1741.050] * (-1742.562) (-1747.980) (-1733.312) [-1753.401] -- 0:08:09
Average standard deviation of split frequencies: 0.015585
291000 -- (-1736.302) (-1741.643) [-1735.390] (-1752.241) * (-1735.931) (-1731.608) (-1738.518) [-1735.375] -- 0:08:09
292000 -- [-1740.922] (-1748.582) (-1730.637) (-1747.801) * (-1750.165) (-1732.636) (-1735.298) [-1731.179] -- 0:08:07
293000 -- (-1749.383) (-1739.038) [-1731.934] (-1735.024) * (-1751.430) (-1740.218) (-1736.785) [-1738.623] -- 0:08:07
294000 -- (-1740.159) (-1743.304) (-1743.216) [-1745.078] * (-1745.107) (-1742.487) [-1728.594] (-1740.002) -- 0:08:07
295000 -- [-1727.523] (-1747.243) (-1746.929) (-1742.193) * (-1751.046) [-1734.965] (-1735.343) (-1766.140) -- 0:08:05
Average standard deviation of split frequencies: 0.015615
296000 -- [-1740.402] (-1724.188) (-1739.380) (-1734.462) * [-1731.963] (-1753.776) (-1744.704) (-1744.547) -- 0:08:05
297000 -- [-1733.519] (-1747.207) (-1751.060) (-1738.264) * [-1723.118] (-1744.585) (-1735.743) (-1739.354) -- 0:08:05
298000 -- (-1745.953) (-1746.448) (-1758.320) [-1734.950] * (-1726.344) (-1728.971) [-1735.734] (-1743.208) -- 0:08:02
299000 -- (-1734.908) (-1729.829) [-1736.963] (-1747.668) * (-1740.581) (-1744.327) (-1738.904) [-1734.791] -- 0:08:02
300000 -- (-1742.494) [-1733.049] (-1735.149) (-1756.320) * (-1741.179) (-1749.269) [-1743.192] (-1750.479) -- 0:08:03
Average standard deviation of split frequencies: 0.015759
301000 -- (-1743.118) (-1737.777) [-1731.736] (-1747.678) * [-1738.122] (-1738.782) (-1734.581) (-1742.232) -- 0:08:03
302000 -- (-1728.877) [-1734.881] (-1752.149) (-1751.553) * (-1772.412) [-1731.768] (-1739.958) (-1748.160) -- 0:08:00
303000 -- [-1743.152] (-1749.929) (-1744.587) (-1744.273) * (-1744.062) (-1746.698) (-1753.991) [-1726.608] -- 0:08:00
304000 -- (-1738.512) (-1739.952) (-1747.822) [-1738.167] * [-1735.923] (-1722.860) (-1734.391) (-1746.111) -- 0:08:00
305000 -- (-1752.388) (-1743.040) (-1744.251) [-1734.973] * (-1737.445) (-1747.622) (-1741.907) [-1726.474] -- 0:07:58
Average standard deviation of split frequencies: 0.014691
306000 -- (-1756.981) [-1749.274] (-1732.778) (-1736.324) * (-1734.123) (-1746.221) [-1745.413] (-1736.675) -- 0:07:58
307000 -- (-1756.440) (-1730.823) (-1740.412) [-1719.345] * [-1734.959] (-1750.582) (-1752.852) (-1737.836) -- 0:07:58
308000 -- (-1742.335) [-1732.101] (-1747.326) (-1740.969) * (-1753.121) [-1738.573] (-1757.332) (-1731.336) -- 0:07:58
309000 -- (-1726.409) [-1735.024] (-1728.609) (-1757.566) * (-1749.598) [-1735.534] (-1747.941) (-1740.660) -- 0:07:56
310000 -- (-1743.977) [-1738.179] (-1740.199) (-1776.070) * (-1757.102) (-1729.056) [-1727.774] (-1765.346) -- 0:07:56
Average standard deviation of split frequencies: 0.014984
311000 -- [-1726.164] (-1746.058) (-1750.445) (-1749.429) * (-1739.125) [-1732.738] (-1733.560) (-1741.657) -- 0:07:56
312000 -- [-1727.732] (-1739.410) (-1742.342) (-1747.455) * (-1746.259) [-1733.979] (-1747.991) (-1740.547) -- 0:07:54
313000 -- [-1729.624] (-1741.611) (-1741.682) (-1755.016) * (-1754.967) (-1733.210) (-1754.614) [-1726.757] -- 0:07:54
314000 -- (-1738.885) (-1726.930) [-1748.995] (-1749.308) * (-1753.559) (-1743.394) (-1729.969) [-1748.677] -- 0:07:54
315000 -- (-1739.585) (-1744.284) [-1738.533] (-1748.389) * (-1747.539) [-1735.584] (-1726.388) (-1752.312) -- 0:07:51
Average standard deviation of split frequencies: 0.015530
316000 -- (-1752.065) (-1736.995) [-1729.110] (-1757.814) * (-1734.289) [-1732.463] (-1753.119) (-1742.628) -- 0:07:51
317000 -- (-1774.613) (-1731.153) (-1737.895) [-1755.530] * (-1743.113) [-1734.966] (-1740.474) (-1727.352) -- 0:07:51
318000 -- (-1763.435) (-1750.903) [-1729.975] (-1752.255) * (-1743.699) (-1744.495) (-1745.965) [-1734.252] -- 0:07:49
319000 -- (-1730.467) (-1744.798) [-1732.674] (-1757.226) * [-1740.879] (-1734.372) (-1756.431) (-1740.986) -- 0:07:49
320000 -- (-1747.753) (-1740.097) [-1727.109] (-1732.594) * (-1737.987) (-1730.165) (-1747.967) [-1728.653] -- 0:07:49
Average standard deviation of split frequencies: 0.017200
321000 -- [-1740.752] (-1745.182) (-1734.261) (-1738.078) * (-1744.833) (-1728.986) [-1734.350] (-1744.224) -- 0:07:47
322000 -- (-1752.744) (-1749.880) [-1727.612] (-1737.579) * (-1745.879) [-1746.946] (-1733.171) (-1743.113) -- 0:07:47
323000 -- (-1726.346) (-1746.594) [-1728.172] (-1739.062) * (-1736.303) [-1742.872] (-1736.439) (-1753.959) -- 0:07:47
324000 -- (-1758.576) [-1723.384] (-1729.361) (-1737.004) * [-1731.225] (-1741.908) (-1747.598) (-1742.713) -- 0:07:45
325000 -- (-1769.422) (-1746.077) [-1733.442] (-1741.179) * (-1738.710) (-1732.552) (-1741.327) [-1741.189] -- 0:07:45
Average standard deviation of split frequencies: 0.015562
326000 -- (-1737.991) (-1736.826) (-1733.111) [-1736.943] * (-1747.141) (-1734.680) (-1748.680) [-1731.311] -- 0:07:45
327000 -- (-1741.442) [-1736.369] (-1744.426) (-1744.610) * (-1747.997) [-1732.891] (-1749.515) (-1736.500) -- 0:07:43
328000 -- (-1732.347) [-1735.406] (-1749.598) (-1741.806) * (-1727.877) (-1761.469) [-1724.916] (-1746.358) -- 0:07:43
329000 -- (-1747.082) [-1726.265] (-1740.805) (-1760.202) * (-1752.760) (-1737.876) (-1747.800) [-1735.566] -- 0:07:42
330000 -- [-1735.816] (-1737.479) (-1746.021) (-1745.412) * (-1755.723) (-1726.855) (-1730.039) [-1734.725] -- 0:07:40
Average standard deviation of split frequencies: 0.014695
331000 -- [-1736.772] (-1738.180) (-1750.098) (-1758.131) * (-1747.216) (-1746.693) (-1737.438) [-1735.153] -- 0:07:40
332000 -- [-1738.317] (-1749.435) (-1742.945) (-1733.048) * (-1754.337) [-1729.539] (-1738.626) (-1750.830) -- 0:07:40
333000 -- (-1737.187) [-1734.950] (-1742.482) (-1736.466) * (-1739.147) (-1741.251) (-1743.474) [-1733.522] -- 0:07:38
334000 -- (-1741.426) [-1734.415] (-1735.988) (-1755.723) * (-1748.718) (-1749.041) [-1731.653] (-1747.548) -- 0:07:38
335000 -- (-1735.878) [-1727.073] (-1752.109) (-1750.566) * (-1743.481) [-1737.041] (-1734.855) (-1748.334) -- 0:07:38
Average standard deviation of split frequencies: 0.012807
336000 -- [-1727.667] (-1735.912) (-1750.765) (-1762.269) * [-1722.796] (-1743.177) (-1743.423) (-1735.385) -- 0:07:38
337000 -- [-1742.005] (-1743.100) (-1746.864) (-1754.474) * [-1737.740] (-1757.150) (-1733.061) (-1747.911) -- 0:07:36
338000 -- [-1731.202] (-1737.170) (-1751.711) (-1752.020) * (-1758.294) (-1743.706) [-1735.834] (-1744.323) -- 0:07:36
339000 -- (-1745.429) (-1748.242) [-1731.673] (-1773.287) * (-1745.760) (-1745.321) [-1737.999] (-1741.843) -- 0:07:36
340000 -- (-1733.484) (-1737.724) [-1733.915] (-1764.753) * (-1746.135) (-1741.768) [-1729.039] (-1732.846) -- 0:07:36
Average standard deviation of split frequencies: 0.012667
341000 -- (-1736.445) [-1736.070] (-1741.912) (-1747.576) * (-1743.828) (-1736.571) (-1739.919) [-1739.004] -- 0:07:34
342000 -- [-1728.367] (-1758.044) (-1747.779) (-1745.169) * [-1730.701] (-1735.651) (-1763.529) (-1736.113) -- 0:07:34
343000 -- (-1737.102) [-1733.082] (-1745.984) (-1746.284) * [-1729.489] (-1736.279) (-1758.599) (-1749.386) -- 0:07:33
344000 -- (-1744.414) [-1730.139] (-1752.279) (-1737.371) * [-1734.348] (-1750.460) (-1746.419) (-1742.973) -- 0:07:31
345000 -- [-1741.943] (-1740.198) (-1756.717) (-1756.493) * [-1740.287] (-1745.605) (-1735.563) (-1748.499) -- 0:07:31
Average standard deviation of split frequencies: 0.011955
346000 -- (-1750.742) [-1734.680] (-1755.718) (-1751.408) * (-1748.756) (-1745.143) (-1751.402) [-1729.969] -- 0:07:31
347000 -- [-1732.160] (-1743.058) (-1752.684) (-1740.381) * (-1746.860) (-1739.691) (-1757.481) [-1730.436] -- 0:07:29
348000 -- [-1739.285] (-1733.252) (-1738.751) (-1745.256) * (-1749.286) [-1749.767] (-1741.625) (-1740.202) -- 0:07:29
349000 -- [-1732.142] (-1730.707) (-1743.087) (-1737.045) * (-1748.169) (-1733.935) (-1752.077) [-1744.115] -- 0:07:29
350000 -- (-1737.507) (-1732.581) [-1752.183] (-1760.357) * (-1745.923) (-1739.640) (-1746.336) [-1726.909] -- 0:07:27
Average standard deviation of split frequencies: 0.012643
351000 -- (-1746.956) (-1734.444) (-1756.755) [-1734.143] * (-1760.575) (-1738.655) (-1733.694) [-1728.106] -- 0:07:27
352000 -- (-1746.398) (-1741.409) (-1765.903) [-1730.940] * (-1745.234) [-1733.314] (-1738.367) (-1741.889) -- 0:07:27
353000 -- (-1751.189) [-1734.213] (-1751.376) (-1733.631) * (-1747.874) (-1734.016) [-1739.589] (-1737.633) -- 0:07:25
354000 -- (-1764.873) (-1738.810) [-1730.402] (-1730.285) * (-1735.045) [-1732.416] (-1744.917) (-1738.167) -- 0:07:25
355000 -- (-1743.561) (-1743.641) (-1743.365) [-1734.953] * (-1733.157) (-1747.636) [-1736.059] (-1743.142) -- 0:07:25
Average standard deviation of split frequencies: 0.012138
356000 -- (-1760.853) [-1731.003] (-1737.458) (-1738.113) * (-1750.902) (-1740.814) [-1737.138] (-1748.895) -- 0:07:23
357000 -- (-1758.874) (-1737.895) (-1739.709) [-1736.356] * (-1738.543) [-1729.954] (-1733.403) (-1752.010) -- 0:07:23
358000 -- (-1755.631) [-1754.533] (-1733.230) (-1730.354) * (-1726.826) [-1734.614] (-1748.592) (-1739.183) -- 0:07:22
359000 -- [-1739.183] (-1751.427) (-1741.837) (-1730.388) * (-1748.660) [-1734.244] (-1746.112) (-1742.270) -- 0:07:21
360000 -- (-1738.294) (-1758.138) (-1742.412) [-1731.973] * (-1743.913) (-1739.821) [-1731.714] (-1746.102) -- 0:07:20
Average standard deviation of split frequencies: 0.011636
361000 -- [-1742.010] (-1764.009) (-1744.218) (-1737.585) * (-1746.144) (-1721.792) (-1737.686) [-1739.624] -- 0:07:20
362000 -- [-1733.460] (-1746.404) (-1736.658) (-1739.329) * (-1734.126) (-1731.309) [-1752.875] (-1746.893) -- 0:07:20
363000 -- [-1736.859] (-1753.962) (-1733.355) (-1740.509) * (-1758.339) [-1743.517] (-1729.881) (-1740.208) -- 0:07:18
364000 -- (-1750.068) [-1746.607] (-1747.789) (-1751.610) * [-1727.189] (-1745.346) (-1735.714) (-1730.805) -- 0:07:18
365000 -- (-1744.911) [-1743.544] (-1726.711) (-1751.940) * (-1742.956) (-1738.029) [-1734.057] (-1732.922) -- 0:07:18
Average standard deviation of split frequencies: 0.011435
366000 -- (-1742.842) (-1744.391) [-1732.328] (-1752.293) * (-1751.706) (-1744.342) (-1743.170) [-1731.649] -- 0:07:16
367000 -- (-1757.656) (-1751.251) [-1729.565] (-1741.436) * [-1739.858] (-1756.092) (-1732.310) (-1739.078) -- 0:07:16
368000 -- (-1744.064) (-1743.856) [-1733.001] (-1743.089) * (-1748.330) (-1742.436) [-1729.367] (-1746.752) -- 0:07:16
369000 -- (-1758.453) (-1736.031) (-1724.716) [-1732.223] * [-1733.113] (-1749.791) (-1743.017) (-1746.995) -- 0:07:16
370000 -- (-1742.780) [-1755.628] (-1735.681) (-1727.768) * [-1729.640] (-1749.703) (-1743.570) (-1739.660) -- 0:07:14
Average standard deviation of split frequencies: 0.011136
371000 -- (-1738.239) (-1733.069) (-1742.429) [-1731.722] * [-1744.845] (-1749.858) (-1747.784) (-1734.447) -- 0:07:14
372000 -- (-1744.807) [-1734.043] (-1746.363) (-1742.851) * (-1750.306) (-1751.268) [-1732.776] (-1743.111) -- 0:07:13
373000 -- [-1729.119] (-1762.966) (-1731.208) (-1730.491) * [-1744.170] (-1746.210) (-1750.215) (-1728.071) -- 0:07:12
374000 -- [-1722.986] (-1748.974) (-1736.014) (-1733.956) * (-1761.622) (-1728.193) [-1737.528] (-1732.961) -- 0:07:11
375000 -- (-1727.385) [-1725.027] (-1740.412) (-1741.746) * (-1745.367) (-1733.868) (-1736.312) [-1738.635] -- 0:07:11
Average standard deviation of split frequencies: 0.011534
376000 -- [-1741.103] (-1738.112) (-1750.997) (-1739.866) * (-1744.950) (-1734.822) [-1732.025] (-1725.455) -- 0:07:09
377000 -- (-1740.468) [-1736.713] (-1743.236) (-1751.221) * (-1757.005) (-1731.869) [-1725.333] (-1744.056) -- 0:07:09
378000 -- (-1739.440) [-1750.118] (-1753.201) (-1738.646) * (-1745.811) [-1737.592] (-1730.282) (-1764.969) -- 0:07:09
379000 -- (-1742.629) [-1732.966] (-1738.399) (-1735.431) * (-1741.550) (-1742.004) (-1741.266) [-1738.302] -- 0:07:09
380000 -- [-1746.255] (-1736.120) (-1757.121) (-1736.355) * (-1745.611) [-1743.873] (-1731.116) (-1729.700) -- 0:07:07
Average standard deviation of split frequencies: 0.011082
381000 -- (-1767.354) (-1736.305) [-1744.517] (-1729.590) * (-1735.726) (-1741.124) [-1745.862] (-1739.276) -- 0:07:07
382000 -- (-1736.536) (-1748.751) (-1759.509) [-1730.653] * (-1742.173) (-1737.795) (-1740.064) [-1728.774] -- 0:07:07
383000 -- [-1736.972] (-1748.049) (-1748.051) (-1744.786) * (-1762.037) [-1744.548] (-1743.640) (-1734.043) -- 0:07:05
384000 -- (-1740.567) (-1771.690) (-1748.729) [-1744.335] * (-1734.615) (-1737.456) [-1741.950] (-1736.220) -- 0:07:05
385000 -- (-1750.167) [-1757.167] (-1741.204) (-1744.327) * (-1734.750) (-1726.739) [-1737.309] (-1736.169) -- 0:07:04
Average standard deviation of split frequencies: 0.010515
386000 -- [-1729.769] (-1753.686) (-1739.509) (-1734.248) * (-1735.760) (-1746.974) [-1730.785] (-1754.752) -- 0:07:03
387000 -- (-1733.002) [-1735.403] (-1746.794) (-1731.052) * [-1732.589] (-1741.401) (-1732.770) (-1755.356) -- 0:07:02
388000 -- (-1742.265) (-1744.899) (-1736.712) [-1730.031] * [-1731.981] (-1757.699) (-1744.306) (-1754.517) -- 0:07:02
389000 -- [-1742.082] (-1744.771) (-1746.570) (-1743.185) * (-1731.580) (-1751.007) [-1730.270] (-1738.905) -- 0:07:00
390000 -- [-1737.380] (-1749.250) (-1732.877) (-1756.245) * (-1750.172) (-1737.226) (-1745.065) [-1738.877] -- 0:07:00
Average standard deviation of split frequencies: 0.010649
391000 -- (-1733.743) (-1758.756) (-1738.522) [-1737.949] * [-1734.504] (-1737.495) (-1740.819) (-1741.485) -- 0:07:00
392000 -- (-1741.624) (-1732.595) (-1729.557) [-1730.060] * (-1748.965) (-1730.616) (-1759.231) [-1732.663] -- 0:06:58
393000 -- (-1746.460) (-1734.179) (-1744.302) [-1743.680] * (-1739.683) [-1733.694] (-1748.074) (-1741.835) -- 0:06:58
394000 -- (-1768.268) (-1736.077) [-1743.078] (-1732.009) * [-1734.630] (-1750.296) (-1745.707) (-1728.894) -- 0:06:58
395000 -- (-1736.443) [-1733.802] (-1735.336) (-1746.681) * (-1734.424) [-1748.345] (-1739.470) (-1735.853) -- 0:06:56
Average standard deviation of split frequencies: 0.010446
396000 -- (-1732.722) (-1767.198) [-1722.091] (-1727.907) * (-1746.293) (-1748.558) [-1733.667] (-1741.913) -- 0:06:56
397000 -- (-1734.382) [-1747.935] (-1735.834) (-1738.989) * (-1737.255) [-1741.116] (-1738.680) (-1741.415) -- 0:06:56
398000 -- [-1731.787] (-1742.004) (-1731.227) (-1766.420) * (-1747.229) (-1740.891) [-1739.165] (-1744.126) -- 0:06:54
399000 -- (-1750.042) (-1742.588) [-1729.106] (-1752.916) * (-1765.944) (-1747.485) [-1733.795] (-1746.679) -- 0:06:54
400000 -- (-1735.315) [-1758.311] (-1749.900) (-1742.699) * (-1760.134) (-1735.570) (-1749.315) [-1735.416] -- 0:06:54
Average standard deviation of split frequencies: 0.010913
401000 -- (-1743.006) (-1753.784) (-1756.725) [-1733.921] * (-1734.265) (-1750.451) (-1738.238) [-1734.006] -- 0:06:53
402000 -- [-1738.013] (-1742.770) (-1743.203) (-1731.526) * (-1731.326) (-1760.560) [-1727.747] (-1738.460) -- 0:06:52
403000 -- (-1745.920) [-1738.949] (-1758.457) (-1733.519) * (-1741.035) (-1740.412) (-1740.540) [-1740.128] -- 0:06:51
404000 -- (-1734.189) [-1728.906] (-1743.522) (-1745.891) * [-1730.162] (-1741.032) (-1746.750) (-1758.179) -- 0:06:51
405000 -- [-1738.782] (-1750.209) (-1741.695) (-1742.855) * (-1738.679) (-1754.453) [-1747.638] (-1745.788) -- 0:06:49
Average standard deviation of split frequencies: 0.011328
406000 -- (-1752.243) (-1751.894) (-1745.468) [-1730.997] * (-1743.714) [-1743.496] (-1737.019) (-1766.483) -- 0:06:49
407000 -- [-1750.573] (-1741.588) (-1746.346) (-1735.838) * (-1746.655) (-1748.818) [-1735.014] (-1750.497) -- 0:06:49
408000 -- (-1753.210) (-1725.975) [-1737.741] (-1762.908) * [-1734.327] (-1753.191) (-1739.010) (-1744.372) -- 0:06:47
409000 -- (-1735.497) [-1729.488] (-1737.389) (-1778.684) * [-1729.392] (-1733.351) (-1752.336) (-1737.920) -- 0:06:47
410000 -- (-1743.468) [-1730.993] (-1749.086) (-1752.027) * (-1728.531) [-1738.253] (-1746.814) (-1740.634) -- 0:06:47
Average standard deviation of split frequencies: 0.011014
411000 -- (-1739.497) (-1742.768) [-1733.289] (-1742.983) * (-1736.130) (-1747.523) [-1741.251] (-1731.124) -- 0:06:45
412000 -- (-1753.915) (-1735.582) [-1740.240] (-1746.757) * (-1746.515) (-1747.853) [-1725.442] (-1741.889) -- 0:06:45
413000 -- [-1729.854] (-1745.421) (-1731.040) (-1772.517) * (-1745.861) [-1724.259] (-1743.135) (-1735.813) -- 0:06:45
414000 -- (-1725.460) (-1745.739) [-1731.979] (-1750.190) * [-1741.943] (-1730.539) (-1744.309) (-1733.543) -- 0:06:43
415000 -- [-1736.333] (-1746.241) (-1747.671) (-1752.263) * (-1744.057) (-1732.347) [-1735.949] (-1746.064) -- 0:06:43
Average standard deviation of split frequencies: 0.011035
416000 -- (-1744.374) (-1744.682) [-1730.839] (-1728.646) * (-1752.069) [-1731.634] (-1744.762) (-1733.333) -- 0:06:42
417000 -- (-1742.307) (-1736.809) (-1751.464) [-1733.054] * (-1737.340) [-1734.751] (-1738.953) (-1755.239) -- 0:06:41
418000 -- [-1736.790] (-1744.690) (-1760.959) (-1736.698) * (-1744.927) [-1741.379] (-1760.409) (-1761.488) -- 0:06:40
419000 -- (-1746.027) (-1745.075) (-1752.236) [-1735.182] * (-1753.553) [-1740.401] (-1749.331) (-1758.974) -- 0:06:40
420000 -- (-1734.975) (-1747.515) (-1747.637) [-1742.550] * [-1728.699] (-1731.287) (-1734.126) (-1741.566) -- 0:06:40
Average standard deviation of split frequencies: 0.011206
421000 -- [-1734.963] (-1748.897) (-1736.147) (-1735.855) * [-1738.529] (-1743.558) (-1745.709) (-1740.856) -- 0:06:38
422000 -- [-1724.641] (-1754.219) (-1736.040) (-1729.357) * [-1737.265] (-1757.435) (-1740.920) (-1748.544) -- 0:06:38
423000 -- (-1747.145) (-1739.858) [-1734.390] (-1735.139) * (-1745.501) (-1759.829) [-1733.053] (-1729.906) -- 0:06:38
424000 -- (-1755.861) (-1746.696) (-1736.906) [-1742.441] * (-1750.502) (-1744.885) (-1738.207) [-1726.893] -- 0:06:36
425000 -- (-1742.618) (-1732.246) [-1737.312] (-1760.587) * [-1738.837] (-1748.461) (-1739.715) (-1745.784) -- 0:06:36
Average standard deviation of split frequencies: 0.011277
426000 -- (-1743.777) (-1738.434) [-1738.415] (-1756.358) * (-1743.229) (-1749.762) (-1744.316) [-1729.113] -- 0:06:36
427000 -- (-1729.992) [-1728.441] (-1739.894) (-1758.571) * (-1732.982) (-1752.129) [-1736.377] (-1726.810) -- 0:06:34
428000 -- [-1742.191] (-1741.371) (-1733.381) (-1741.781) * (-1742.971) (-1759.378) (-1733.093) [-1740.297] -- 0:06:34
429000 -- (-1741.999) [-1739.876] (-1742.131) (-1757.164) * (-1735.763) [-1741.480] (-1737.606) (-1747.788) -- 0:06:33
430000 -- (-1756.022) (-1739.494) (-1736.239) [-1739.220] * (-1743.722) (-1746.634) [-1743.479] (-1756.407) -- 0:06:32
Average standard deviation of split frequencies: 0.011024
431000 -- (-1749.008) [-1733.609] (-1763.994) (-1744.430) * (-1749.969) (-1749.652) (-1739.703) [-1729.274] -- 0:06:32
432000 -- [-1740.548] (-1744.874) (-1759.207) (-1726.296) * (-1757.667) (-1740.484) [-1721.059] (-1723.151) -- 0:06:31
433000 -- (-1740.891) (-1752.200) [-1740.529] (-1733.049) * [-1737.037] (-1734.565) (-1729.594) (-1743.464) -- 0:06:31
434000 -- (-1754.931) (-1752.899) [-1729.877] (-1733.062) * (-1755.489) (-1739.414) (-1737.827) [-1729.557] -- 0:06:29
435000 -- (-1736.577) (-1747.706) (-1750.009) [-1748.024] * (-1749.283) (-1738.303) [-1730.832] (-1742.091) -- 0:06:29
Average standard deviation of split frequencies: 0.010812
436000 -- [-1738.497] (-1739.345) (-1739.592) (-1740.416) * (-1756.914) (-1742.932) (-1736.089) [-1738.778] -- 0:06:29
437000 -- (-1741.691) (-1742.076) (-1733.359) [-1729.488] * (-1732.489) (-1748.928) (-1734.793) [-1732.399] -- 0:06:27
438000 -- (-1748.020) [-1728.105] (-1746.275) (-1732.411) * (-1736.235) (-1750.512) (-1733.077) [-1728.809] -- 0:06:27
439000 -- [-1731.667] (-1746.218) (-1744.077) (-1745.823) * (-1749.571) [-1735.715] (-1743.320) (-1752.879) -- 0:06:27
440000 -- [-1739.129] (-1737.715) (-1734.566) (-1755.788) * (-1745.530) (-1743.311) (-1752.196) [-1741.298] -- 0:06:25
Average standard deviation of split frequencies: 0.010515
441000 -- (-1730.880) (-1730.063) [-1740.376] (-1761.721) * (-1754.648) (-1753.720) (-1748.828) [-1734.211] -- 0:06:25
442000 -- (-1738.802) (-1743.557) [-1728.194] (-1734.813) * (-1746.490) (-1755.014) (-1745.529) [-1738.891] -- 0:06:25
443000 -- (-1725.730) (-1755.992) (-1745.184) [-1748.552] * (-1745.226) (-1745.580) (-1741.592) [-1751.927] -- 0:06:23
444000 -- (-1725.525) [-1727.260] (-1750.972) (-1775.091) * (-1726.700) (-1744.492) (-1751.538) [-1752.637] -- 0:06:23
445000 -- [-1734.154] (-1743.359) (-1733.136) (-1747.328) * (-1737.522) (-1746.102) [-1731.426] (-1745.888) -- 0:06:22
Average standard deviation of split frequencies: 0.010776
446000 -- [-1733.092] (-1746.197) (-1742.910) (-1736.628) * (-1738.951) (-1752.101) (-1731.794) [-1728.972] -- 0:06:21
447000 -- (-1743.534) (-1746.714) (-1731.133) [-1734.673] * (-1739.652) (-1759.459) (-1739.736) [-1731.413] -- 0:06:21
448000 -- [-1735.312] (-1746.259) (-1747.833) (-1738.250) * (-1736.846) (-1752.756) [-1731.555] (-1746.314) -- 0:06:20
449000 -- [-1737.746] (-1749.674) (-1751.270) (-1776.155) * [-1735.843] (-1756.322) (-1731.922) (-1757.625) -- 0:06:19
450000 -- (-1745.338) [-1739.853] (-1745.351) (-1741.678) * (-1759.356) [-1744.810] (-1738.929) (-1747.857) -- 0:06:18
Average standard deviation of split frequencies: 0.010231
451000 -- (-1750.693) [-1731.025] (-1731.560) (-1739.653) * (-1727.910) (-1753.285) (-1741.882) [-1740.280] -- 0:06:18
452000 -- (-1743.308) (-1735.121) (-1739.109) [-1744.152] * (-1735.602) [-1730.256] (-1738.666) (-1745.288) -- 0:06:17
453000 -- [-1728.286] (-1751.510) (-1750.359) (-1738.028) * (-1729.195) [-1720.758] (-1738.037) (-1757.134) -- 0:06:16
454000 -- (-1748.061) [-1730.615] (-1755.099) (-1735.345) * (-1750.087) [-1747.780] (-1750.456) (-1757.194) -- 0:06:16
455000 -- (-1734.721) (-1737.667) (-1753.258) [-1747.504] * [-1734.411] (-1754.486) (-1739.771) (-1733.942) -- 0:06:14
Average standard deviation of split frequencies: 0.010565
456000 -- (-1735.957) (-1733.456) (-1747.017) [-1732.833] * (-1731.789) [-1736.011] (-1747.386) (-1747.973) -- 0:06:14
457000 -- [-1729.899] (-1739.043) (-1736.312) (-1745.000) * (-1739.299) (-1742.218) (-1732.068) [-1751.503] -- 0:06:14
458000 -- (-1745.266) (-1747.012) [-1751.748] (-1759.449) * (-1733.460) (-1747.055) [-1745.793] (-1739.180) -- 0:06:12
459000 -- (-1745.887) [-1743.386] (-1755.387) (-1749.159) * [-1729.257] (-1735.854) (-1743.267) (-1735.117) -- 0:06:12
460000 -- [-1728.809] (-1736.122) (-1731.299) (-1742.520) * (-1756.509) (-1738.096) [-1737.277] (-1741.485) -- 0:06:12
Average standard deviation of split frequencies: 0.010566
461000 -- (-1746.184) [-1737.221] (-1746.847) (-1752.057) * [-1732.107] (-1741.152) (-1737.460) (-1738.355) -- 0:06:10
462000 -- [-1738.085] (-1748.679) (-1746.573) (-1745.301) * (-1741.489) (-1751.384) [-1734.829] (-1730.568) -- 0:06:10
463000 -- (-1745.198) [-1738.468] (-1736.342) (-1748.101) * (-1758.974) (-1737.195) [-1731.295] (-1738.258) -- 0:06:09
464000 -- (-1747.684) [-1733.998] (-1752.162) (-1739.590) * (-1767.986) [-1742.476] (-1751.014) (-1734.888) -- 0:06:08
465000 -- [-1731.055] (-1742.238) (-1751.654) (-1729.855) * (-1747.234) (-1736.195) [-1739.785] (-1740.239) -- 0:06:08
Average standard deviation of split frequencies: 0.010067
466000 -- (-1736.361) [-1741.143] (-1746.520) (-1741.256) * (-1756.962) (-1736.944) (-1743.265) [-1738.220] -- 0:06:07
467000 -- [-1733.440] (-1739.067) (-1738.662) (-1751.485) * [-1728.276] (-1753.062) (-1751.246) (-1739.471) -- 0:06:06
468000 -- (-1741.716) [-1737.329] (-1729.219) (-1743.328) * (-1753.023) [-1727.809] (-1750.001) (-1745.122) -- 0:06:06
469000 -- (-1747.915) (-1738.604) [-1735.586] (-1737.545) * [-1732.050] (-1735.150) (-1756.665) (-1758.063) -- 0:06:05
470000 -- (-1758.899) (-1735.272) [-1737.916] (-1741.700) * [-1730.778] (-1750.794) (-1746.414) (-1759.406) -- 0:06:04
Average standard deviation of split frequencies: 0.010241
471000 -- (-1757.236) (-1734.898) [-1746.026] (-1738.072) * (-1743.606) [-1720.316] (-1759.029) (-1739.362) -- 0:06:03
472000 -- (-1738.737) (-1737.877) (-1754.499) [-1731.859] * (-1734.258) [-1733.898] (-1746.450) (-1749.317) -- 0:06:03
473000 -- (-1735.074) (-1734.732) (-1745.297) [-1729.387] * [-1744.420] (-1729.186) (-1734.839) (-1743.005) -- 0:06:03
474000 -- (-1737.798) [-1743.259] (-1735.165) (-1739.969) * [-1735.156] (-1740.470) (-1743.494) (-1737.869) -- 0:06:01
475000 -- [-1736.019] (-1754.075) (-1745.850) (-1728.785) * (-1729.688) [-1727.670] (-1746.762) (-1757.523) -- 0:06:01
Average standard deviation of split frequencies: 0.010572
476000 -- [-1740.955] (-1744.909) (-1736.724) (-1729.479) * (-1753.851) [-1734.575] (-1735.564) (-1734.401) -- 0:06:01
477000 -- (-1756.292) (-1744.212) [-1741.985] (-1737.812) * (-1748.837) (-1735.555) [-1737.422] (-1744.691) -- 0:05:59
478000 -- [-1722.885] (-1748.998) (-1745.911) (-1734.482) * (-1743.112) [-1733.769] (-1743.541) (-1747.756) -- 0:05:59
479000 -- (-1750.269) (-1740.876) (-1743.770) [-1732.144] * (-1736.610) [-1732.019] (-1723.279) (-1747.132) -- 0:05:58
480000 -- [-1724.801] (-1733.183) (-1751.220) (-1759.807) * (-1752.067) (-1741.141) [-1733.631] (-1762.970) -- 0:05:57
Average standard deviation of split frequencies: 0.010739
481000 -- (-1738.455) [-1737.762] (-1756.501) (-1740.652) * (-1760.834) (-1732.726) [-1728.092] (-1747.093) -- 0:05:57
482000 -- [-1730.521] (-1745.330) (-1729.819) (-1743.246) * [-1740.122] (-1744.219) (-1728.437) (-1742.326) -- 0:05:56
483000 -- (-1759.042) (-1744.905) [-1741.307] (-1738.166) * [-1734.999] (-1729.252) (-1748.277) (-1751.157) -- 0:05:55
484000 -- (-1739.864) (-1749.961) [-1724.691] (-1748.334) * (-1735.347) (-1736.221) [-1741.325] (-1749.482) -- 0:05:55
485000 -- (-1746.035) (-1739.036) [-1732.684] (-1734.418) * [-1747.223] (-1743.535) (-1729.218) (-1755.166) -- 0:05:54
Average standard deviation of split frequencies: 0.010149
486000 -- [-1740.379] (-1735.093) (-1761.322) (-1727.500) * (-1727.419) [-1728.961] (-1744.040) (-1745.377) -- 0:05:54
487000 -- (-1741.165) (-1747.298) (-1754.688) [-1723.070] * (-1740.035) [-1748.343] (-1740.190) (-1728.137) -- 0:05:52
488000 -- [-1737.949] (-1749.507) (-1751.830) (-1738.138) * (-1747.158) (-1746.535) [-1724.164] (-1743.716) -- 0:05:52
489000 -- [-1731.447] (-1744.730) (-1750.292) (-1733.868) * (-1740.807) (-1748.745) (-1736.588) [-1739.477] -- 0:05:52
490000 -- (-1737.298) [-1735.157] (-1752.892) (-1739.809) * [-1729.784] (-1758.378) (-1736.338) (-1749.191) -- 0:05:50
Average standard deviation of split frequencies: 0.010193
491000 -- (-1738.773) (-1739.213) (-1751.342) [-1740.756] * [-1726.193] (-1755.157) (-1755.069) (-1734.857) -- 0:05:50
492000 -- (-1740.160) (-1734.247) [-1739.987] (-1739.115) * [-1724.227] (-1756.113) (-1755.234) (-1757.417) -- 0:05:50
493000 -- (-1738.298) [-1741.596] (-1740.403) (-1742.012) * (-1743.499) [-1748.622] (-1745.768) (-1751.657) -- 0:05:49
494000 -- (-1743.100) (-1739.402) [-1743.298] (-1730.840) * (-1751.227) (-1747.708) [-1735.204] (-1754.143) -- 0:05:48
495000 -- (-1726.149) [-1736.490] (-1747.624) (-1734.532) * [-1747.424] (-1741.939) (-1733.840) (-1755.646) -- 0:05:47
Average standard deviation of split frequencies: 0.010312
496000 -- (-1745.739) [-1732.092] (-1737.461) (-1742.195) * (-1748.654) (-1726.286) [-1738.775] (-1752.964) -- 0:05:47
497000 -- (-1734.736) (-1741.725) [-1734.891] (-1750.017) * (-1743.889) (-1730.479) [-1744.565] (-1737.266) -- 0:05:46
498000 -- (-1751.528) [-1727.624] (-1755.808) (-1736.178) * (-1737.732) (-1761.027) [-1732.456] (-1752.439) -- 0:05:45
499000 -- (-1741.549) [-1728.289] (-1744.744) (-1749.593) * (-1733.100) (-1751.766) [-1728.239] (-1750.301) -- 0:05:45
500000 -- [-1731.160] (-1753.447) (-1732.921) (-1731.631) * (-1738.961) (-1741.510) (-1743.569) [-1738.759] -- 0:05:44
Average standard deviation of split frequencies: 0.010028
501000 -- [-1735.673] (-1731.586) (-1740.440) (-1732.412) * (-1751.048) [-1727.388] (-1745.394) (-1752.170) -- 0:05:43
502000 -- [-1727.104] (-1730.171) (-1736.343) (-1760.321) * (-1752.794) (-1730.334) [-1732.650] (-1746.761) -- 0:05:43
503000 -- (-1747.800) (-1741.652) [-1739.511] (-1764.657) * (-1743.243) [-1739.430] (-1738.997) (-1738.156) -- 0:05:41
504000 -- [-1738.400] (-1759.377) (-1741.034) (-1745.149) * [-1729.022] (-1744.233) (-1762.427) (-1749.363) -- 0:05:41
505000 -- (-1735.255) (-1769.614) (-1740.545) [-1738.585] * (-1735.502) (-1754.266) [-1729.591] (-1731.400) -- 0:05:41
Average standard deviation of split frequencies: 0.010155
506000 -- (-1750.539) (-1750.813) [-1739.189] (-1759.277) * (-1742.964) [-1735.780] (-1756.523) (-1730.396) -- 0:05:40
507000 -- [-1742.870] (-1777.045) (-1736.180) (-1756.184) * [-1722.399] (-1734.287) (-1757.430) (-1746.797) -- 0:05:39
508000 -- [-1731.942] (-1745.315) (-1730.988) (-1744.608) * [-1733.009] (-1740.252) (-1754.516) (-1749.995) -- 0:05:38
509000 -- (-1751.773) (-1741.501) [-1743.544] (-1741.706) * (-1729.590) (-1753.653) (-1746.412) [-1725.171] -- 0:05:38
510000 -- (-1749.659) (-1745.851) (-1747.159) [-1734.568] * [-1741.243] (-1743.604) (-1746.244) (-1738.004) -- 0:05:37
Average standard deviation of split frequencies: 0.010415
511000 -- (-1747.271) (-1735.632) [-1739.335] (-1746.630) * (-1747.363) [-1733.847] (-1750.161) (-1752.879) -- 0:05:36
512000 -- (-1744.886) (-1738.705) [-1726.948] (-1736.471) * (-1746.665) [-1733.125] (-1747.610) (-1749.953) -- 0:05:36
513000 -- [-1734.503] (-1739.448) (-1761.280) (-1732.281) * (-1743.190) [-1731.836] (-1750.394) (-1733.297) -- 0:05:35
514000 -- [-1725.983] (-1727.849) (-1763.176) (-1740.375) * [-1735.328] (-1738.860) (-1743.607) (-1745.877) -- 0:05:34
515000 -- (-1753.035) [-1737.626] (-1751.004) (-1734.061) * [-1740.786] (-1724.506) (-1742.198) (-1739.257) -- 0:05:34
Average standard deviation of split frequencies: 0.010643
516000 -- (-1733.495) (-1744.354) [-1744.388] (-1737.948) * (-1737.567) [-1729.152] (-1733.015) (-1761.515) -- 0:05:32
517000 -- (-1739.700) (-1726.951) [-1731.682] (-1743.212) * (-1742.548) (-1744.916) (-1731.829) [-1738.832] -- 0:05:32
518000 -- [-1746.583] (-1750.815) (-1747.156) (-1739.915) * (-1745.073) (-1756.238) (-1747.516) [-1733.590] -- 0:05:32
519000 -- (-1735.258) (-1748.160) (-1734.939) [-1721.155] * (-1737.591) (-1754.542) (-1749.843) [-1731.360] -- 0:05:31
520000 -- [-1729.590] (-1747.720) (-1735.339) (-1748.304) * (-1748.742) (-1747.586) (-1737.236) [-1735.072] -- 0:05:30
Average standard deviation of split frequencies: 0.009914
521000 -- (-1731.063) (-1742.499) [-1739.080] (-1743.810) * (-1745.528) (-1743.356) (-1747.386) [-1730.345] -- 0:05:30
522000 -- [-1726.540] (-1745.367) (-1738.203) (-1754.768) * (-1741.966) (-1754.282) [-1728.584] (-1751.201) -- 0:05:29
523000 -- (-1728.402) [-1740.277] (-1747.556) (-1742.601) * (-1741.058) [-1742.427] (-1741.447) (-1742.547) -- 0:05:28
524000 -- [-1739.325] (-1730.774) (-1734.141) (-1749.707) * (-1719.467) [-1729.425] (-1736.195) (-1746.996) -- 0:05:27
525000 -- (-1749.204) (-1751.858) (-1732.052) [-1741.168] * (-1752.283) (-1749.306) (-1754.029) [-1732.893] -- 0:05:27
Average standard deviation of split frequencies: 0.009589
526000 -- (-1733.619) (-1734.764) (-1734.246) [-1752.744] * [-1723.690] (-1744.795) (-1742.916) (-1733.252) -- 0:05:26
527000 -- (-1739.044) [-1731.638] (-1737.410) (-1729.039) * (-1744.782) (-1732.619) [-1729.308] (-1733.978) -- 0:05:25
528000 -- (-1746.999) (-1746.962) [-1727.564] (-1738.307) * (-1744.570) (-1768.559) (-1724.584) [-1737.284] -- 0:05:25
529000 -- (-1759.436) (-1749.599) [-1734.508] (-1731.796) * (-1735.165) [-1743.157] (-1744.187) (-1743.270) -- 0:05:24
530000 -- (-1739.960) (-1761.082) (-1740.158) [-1744.840] * [-1742.095] (-1738.022) (-1751.503) (-1767.020) -- 0:05:23
Average standard deviation of split frequencies: 0.009521
531000 -- (-1740.450) (-1753.469) (-1744.595) [-1732.921] * (-1728.686) [-1732.906] (-1747.111) (-1748.729) -- 0:05:23
532000 -- (-1748.813) [-1739.682] (-1764.886) (-1733.925) * (-1742.569) [-1738.848] (-1734.499) (-1741.056) -- 0:05:21
533000 -- (-1748.867) [-1736.754] (-1761.363) (-1749.381) * (-1746.229) (-1736.777) [-1729.332] (-1736.370) -- 0:05:21
534000 -- (-1734.757) [-1741.421] (-1751.918) (-1735.178) * (-1748.785) (-1751.823) [-1726.486] (-1733.508) -- 0:05:21
535000 -- (-1740.511) [-1736.300] (-1749.953) (-1730.294) * (-1753.433) (-1741.974) (-1733.606) [-1726.872] -- 0:05:19
Average standard deviation of split frequencies: 0.009787
536000 -- (-1745.181) [-1737.446] (-1731.968) (-1742.167) * (-1754.282) (-1745.701) (-1745.011) [-1739.840] -- 0:05:19
537000 -- (-1735.150) [-1738.952] (-1736.044) (-1760.621) * (-1751.702) [-1745.792] (-1738.348) (-1752.325) -- 0:05:19
538000 -- [-1741.791] (-1733.970) (-1741.474) (-1758.685) * (-1737.366) [-1740.394] (-1753.142) (-1740.604) -- 0:05:17
539000 -- (-1747.971) (-1740.545) (-1756.251) [-1734.204] * (-1743.341) (-1742.373) (-1744.875) [-1735.786] -- 0:05:17
540000 -- (-1749.406) (-1747.197) (-1749.501) [-1737.332] * (-1746.929) (-1746.036) [-1745.020] (-1730.034) -- 0:05:16
Average standard deviation of split frequencies: 0.009926
541000 -- (-1741.918) (-1736.453) [-1735.062] (-1746.335) * (-1750.688) (-1754.177) (-1733.392) [-1746.761] -- 0:05:16
542000 -- (-1743.591) (-1743.907) [-1724.471] (-1747.185) * (-1744.465) [-1749.012] (-1736.643) (-1736.242) -- 0:05:15
543000 -- (-1753.554) [-1736.178] (-1745.294) (-1739.255) * (-1743.313) (-1733.502) (-1744.053) [-1746.190] -- 0:05:14
544000 -- (-1754.824) [-1734.942] (-1748.695) (-1733.969) * (-1743.489) [-1729.623] (-1763.925) (-1756.239) -- 0:05:14
545000 -- (-1742.120) (-1740.823) (-1750.676) [-1725.044] * (-1744.531) (-1736.645) (-1748.487) [-1732.338] -- 0:05:13
Average standard deviation of split frequencies: 0.009564
546000 -- (-1760.078) [-1731.880] (-1738.268) (-1745.940) * (-1744.115) (-1747.004) (-1748.373) [-1728.529] -- 0:05:12
547000 -- [-1738.451] (-1736.205) (-1750.786) (-1744.395) * (-1742.183) [-1723.233] (-1743.808) (-1756.047) -- 0:05:12
548000 -- (-1739.772) (-1760.836) (-1768.133) [-1727.843] * (-1725.924) (-1741.585) [-1728.199] (-1741.064) -- 0:05:10
549000 -- [-1743.411] (-1745.628) (-1750.708) (-1728.971) * (-1731.700) [-1733.799] (-1754.544) (-1741.428) -- 0:05:10
550000 -- [-1728.284] (-1753.478) (-1754.895) (-1739.245) * (-1745.201) (-1739.888) (-1742.400) [-1741.987] -- 0:05:10
Average standard deviation of split frequencies: 0.009566
551000 -- [-1740.010] (-1747.099) (-1767.460) (-1744.493) * [-1750.253] (-1752.066) (-1750.939) (-1734.183) -- 0:05:08
552000 -- [-1725.406] (-1757.804) (-1756.460) (-1735.585) * (-1741.282) (-1751.139) (-1741.991) [-1731.721] -- 0:05:08
553000 -- (-1737.376) (-1743.732) (-1734.634) [-1727.323] * [-1734.857] (-1741.924) (-1739.444) (-1741.112) -- 0:05:07
554000 -- (-1742.832) (-1737.127) [-1735.765] (-1732.963) * (-1747.858) (-1747.169) (-1735.917) [-1740.224] -- 0:05:06
555000 -- (-1743.875) (-1748.710) (-1737.773) [-1733.832] * (-1766.547) (-1749.470) [-1726.987] (-1744.224) -- 0:05:06
Average standard deviation of split frequencies: 0.009708
556000 -- (-1730.048) (-1736.085) [-1749.969] (-1738.840) * [-1741.394] (-1753.734) (-1747.634) (-1745.177) -- 0:05:05
557000 -- (-1742.590) [-1725.271] (-1738.749) (-1755.373) * (-1749.710) (-1741.377) (-1747.916) [-1722.140] -- 0:05:04
558000 -- (-1745.033) (-1731.624) [-1729.630] (-1750.536) * (-1748.936) (-1753.853) (-1736.767) [-1731.949] -- 0:05:04
559000 -- (-1744.183) [-1733.485] (-1736.462) (-1751.368) * (-1728.153) [-1740.978] (-1749.349) (-1737.585) -- 0:05:03
560000 -- [-1726.839] (-1750.449) (-1744.562) (-1746.699) * (-1741.310) (-1738.589) (-1736.070) [-1727.901] -- 0:05:02
Average standard deviation of split frequencies: 0.009333
561000 -- (-1727.211) (-1744.426) [-1728.429] (-1743.285) * (-1734.960) (-1733.791) [-1753.884] (-1755.629) -- 0:05:02
562000 -- (-1725.391) [-1729.389] (-1743.364) (-1741.888) * (-1739.523) (-1729.017) [-1734.111] (-1746.023) -- 0:05:01
563000 -- (-1741.188) [-1730.133] (-1753.775) (-1741.802) * (-1741.406) [-1737.708] (-1731.775) (-1738.856) -- 0:05:00
564000 -- (-1752.962) [-1738.167] (-1740.097) (-1736.178) * (-1740.449) [-1735.390] (-1742.823) (-1740.298) -- 0:04:59
565000 -- (-1750.281) (-1748.925) (-1736.222) [-1731.067] * (-1733.413) (-1746.051) (-1754.717) [-1733.127] -- 0:04:59
Average standard deviation of split frequencies: 0.009391
566000 -- (-1735.865) (-1754.297) [-1742.886] (-1726.015) * [-1743.140] (-1742.080) (-1753.060) (-1732.509) -- 0:04:58
567000 -- (-1747.213) (-1743.478) [-1733.724] (-1737.666) * (-1752.322) [-1731.363] (-1753.710) (-1732.045) -- 0:04:57
568000 -- (-1729.958) (-1748.158) [-1727.622] (-1728.021) * (-1756.351) [-1747.253] (-1732.702) (-1740.586) -- 0:04:57
569000 -- (-1738.774) (-1738.305) (-1747.270) [-1740.582] * (-1762.854) [-1744.746] (-1749.735) (-1740.927) -- 0:04:56
570000 -- (-1736.052) (-1736.709) (-1743.001) [-1734.626] * (-1732.918) [-1732.101] (-1749.536) (-1749.897) -- 0:04:55
Average standard deviation of split frequencies: 0.009190
571000 -- (-1738.561) (-1750.102) (-1746.951) [-1732.681] * (-1745.024) [-1737.563] (-1740.757) (-1745.038) -- 0:04:55
572000 -- (-1742.780) (-1743.662) (-1725.647) [-1738.385] * (-1731.224) (-1737.429) (-1749.819) [-1736.665] -- 0:04:54
573000 -- (-1745.874) (-1754.805) (-1737.848) [-1742.730] * [-1728.349] (-1742.556) (-1738.642) (-1749.557) -- 0:04:53
574000 -- (-1729.219) (-1753.512) [-1741.699] (-1747.758) * [-1731.520] (-1734.401) (-1743.536) (-1751.343) -- 0:04:53
575000 -- [-1721.779] (-1743.294) (-1752.441) (-1746.232) * (-1747.131) (-1735.846) (-1741.187) [-1726.315] -- 0:04:52
Average standard deviation of split frequencies: 0.009228
576000 -- [-1738.638] (-1745.545) (-1737.131) (-1752.121) * (-1760.497) (-1743.192) (-1740.357) [-1727.003] -- 0:04:51
577000 -- (-1748.231) (-1748.359) [-1741.917] (-1734.427) * (-1740.537) (-1740.825) [-1725.901] (-1736.570) -- 0:04:51
578000 -- (-1740.522) (-1733.508) [-1720.896] (-1746.338) * (-1733.494) (-1745.133) (-1745.102) [-1732.039] -- 0:04:50
579000 -- (-1741.786) (-1742.916) [-1724.918] (-1742.869) * (-1739.353) (-1734.433) (-1744.628) [-1736.684] -- 0:04:50
580000 -- (-1745.846) (-1750.041) (-1743.081) [-1731.812] * [-1731.560] (-1748.074) (-1750.884) (-1742.391) -- 0:04:48
Average standard deviation of split frequencies: 0.009255
581000 -- [-1728.661] (-1753.606) (-1733.957) (-1735.430) * (-1739.952) (-1752.423) [-1728.324] (-1765.560) -- 0:04:48
582000 -- [-1734.235] (-1743.120) (-1745.088) (-1729.611) * (-1737.112) [-1742.081] (-1743.426) (-1740.406) -- 0:04:48
583000 -- [-1738.291] (-1743.903) (-1738.692) (-1743.626) * [-1731.052] (-1740.106) (-1749.799) (-1744.284) -- 0:04:46
584000 -- [-1746.534] (-1732.073) (-1743.930) (-1741.109) * (-1741.245) (-1750.998) (-1740.863) [-1739.624] -- 0:04:46
585000 -- (-1726.449) (-1716.612) (-1769.936) [-1735.229] * (-1736.374) (-1743.020) (-1748.453) [-1730.393] -- 0:04:45
Average standard deviation of split frequencies: 0.009110
586000 -- (-1752.832) (-1739.079) (-1762.189) [-1720.284] * (-1740.338) [-1739.897] (-1743.313) (-1742.558) -- 0:04:45
587000 -- (-1751.591) (-1750.204) (-1749.812) [-1731.502] * (-1734.113) (-1748.359) [-1740.452] (-1746.067) -- 0:04:44
588000 -- (-1754.601) [-1736.112] (-1731.944) (-1758.738) * [-1730.550] (-1743.133) (-1752.649) (-1745.359) -- 0:04:43
589000 -- (-1746.292) (-1745.420) [-1727.258] (-1736.847) * [-1728.392] (-1750.767) (-1749.742) (-1757.915) -- 0:04:43
590000 -- (-1733.296) (-1739.444) [-1732.710] (-1754.063) * [-1726.855] (-1738.781) (-1758.398) (-1748.863) -- 0:04:42
Average standard deviation of split frequencies: 0.009098
591000 -- (-1750.583) (-1735.504) [-1750.832] (-1739.885) * [-1736.954] (-1747.225) (-1749.016) (-1738.905) -- 0:04:41
592000 -- (-1761.023) [-1743.658] (-1746.811) (-1750.137) * (-1758.482) [-1730.374] (-1742.862) (-1738.539) -- 0:04:41
593000 -- (-1759.441) [-1745.634] (-1739.433) (-1756.643) * (-1737.187) (-1741.859) (-1748.617) [-1733.153] -- 0:04:40
594000 -- (-1726.570) (-1754.446) (-1737.462) [-1739.470] * (-1736.104) [-1730.804] (-1754.056) (-1744.408) -- 0:04:40
595000 -- (-1762.212) (-1746.039) (-1736.835) [-1741.580] * (-1735.762) (-1748.995) [-1742.620] (-1751.060) -- 0:04:39
Average standard deviation of split frequencies: 0.009669
596000 -- (-1739.847) (-1730.489) (-1736.459) [-1727.467] * (-1769.832) (-1731.185) [-1728.149] (-1762.062) -- 0:04:38
597000 -- (-1743.603) (-1752.265) (-1746.165) [-1736.301] * (-1758.855) [-1728.348] (-1727.344) (-1754.013) -- 0:04:38
598000 -- (-1739.384) (-1737.814) (-1748.203) [-1727.968] * [-1742.496] (-1755.913) (-1733.392) (-1730.189) -- 0:04:37
599000 -- (-1763.180) [-1732.183] (-1753.415) (-1730.153) * (-1737.593) (-1762.267) (-1731.705) [-1724.501] -- 0:04:36
600000 -- (-1748.310) (-1738.908) [-1734.295] (-1757.314) * [-1726.738] (-1743.187) (-1741.104) (-1737.486) -- 0:04:36
Average standard deviation of split frequencies: 0.009538
601000 -- (-1743.508) [-1740.765] (-1740.711) (-1735.221) * (-1742.972) [-1723.640] (-1727.655) (-1754.227) -- 0:04:35
602000 -- (-1739.306) (-1764.999) [-1723.810] (-1737.483) * (-1748.923) [-1727.831] (-1739.727) (-1744.697) -- 0:04:34
603000 -- (-1745.122) (-1735.285) (-1735.232) [-1747.675] * (-1735.221) [-1748.913] (-1756.165) (-1744.599) -- 0:04:33
604000 -- (-1744.068) [-1733.114] (-1722.073) (-1738.517) * (-1749.066) (-1753.937) (-1744.095) [-1737.002] -- 0:04:33
605000 -- (-1743.580) [-1730.362] (-1738.303) (-1742.937) * (-1731.039) [-1729.668] (-1746.195) (-1754.219) -- 0:04:32
Average standard deviation of split frequencies: 0.008823
606000 -- (-1742.130) (-1735.957) (-1728.818) [-1739.200] * [-1747.479] (-1736.636) (-1734.994) (-1745.415) -- 0:04:31
607000 -- (-1757.809) (-1752.170) (-1730.214) [-1741.789] * (-1734.917) [-1745.987] (-1740.925) (-1741.988) -- 0:04:31
608000 -- (-1763.518) (-1756.161) (-1735.602) [-1733.020] * (-1752.857) [-1741.331] (-1735.312) (-1744.710) -- 0:04:30
609000 -- (-1746.914) (-1740.880) [-1723.876] (-1738.531) * (-1752.502) [-1746.942] (-1730.228) (-1736.294) -- 0:04:29
610000 -- (-1737.352) (-1743.264) (-1733.263) [-1727.469] * (-1726.082) (-1745.000) (-1738.168) [-1734.833] -- 0:04:29
Average standard deviation of split frequencies: 0.008837
611000 -- (-1733.134) (-1739.596) (-1748.631) [-1725.272] * [-1737.405] (-1750.902) (-1745.571) (-1734.701) -- 0:04:28
612000 -- [-1737.351] (-1752.333) (-1761.183) (-1729.983) * (-1748.758) [-1739.095] (-1735.364) (-1736.059) -- 0:04:28
613000 -- (-1742.964) (-1739.850) (-1722.580) [-1734.473] * (-1755.167) (-1754.850) (-1741.951) [-1744.587] -- 0:04:27
614000 -- [-1739.288] (-1737.820) (-1726.756) (-1735.036) * [-1750.758] (-1737.128) (-1742.330) (-1741.572) -- 0:04:26
615000 -- [-1733.677] (-1754.006) (-1748.655) (-1744.052) * (-1741.315) (-1740.921) [-1734.932] (-1744.040) -- 0:04:26
Average standard deviation of split frequencies: 0.008997
616000 -- [-1735.976] (-1744.077) (-1732.219) (-1742.334) * (-1739.325) (-1731.404) (-1741.616) [-1735.991] -- 0:04:24
617000 -- (-1741.533) (-1748.709) [-1725.647] (-1744.628) * (-1738.079) (-1749.482) (-1731.755) [-1729.872] -- 0:04:24
618000 -- (-1725.591) [-1749.508] (-1728.443) (-1744.972) * [-1729.657] (-1742.890) (-1741.825) (-1762.125) -- 0:04:23
619000 -- (-1747.088) (-1737.246) (-1741.719) [-1735.500] * [-1736.384] (-1729.809) (-1739.883) (-1752.839) -- 0:04:22
620000 -- (-1739.340) (-1747.369) [-1741.853] (-1734.531) * (-1743.724) [-1726.485] (-1747.708) (-1758.078) -- 0:04:22
Average standard deviation of split frequencies: 0.008622
621000 -- [-1733.921] (-1743.529) (-1749.215) (-1757.746) * (-1728.631) (-1746.437) (-1725.876) [-1740.848] -- 0:04:21
622000 -- (-1739.598) [-1738.569] (-1752.075) (-1753.100) * (-1735.850) (-1756.293) (-1746.574) [-1738.032] -- 0:04:20
623000 -- [-1743.236] (-1741.304) (-1744.381) (-1749.854) * [-1741.093] (-1735.823) (-1765.910) (-1738.272) -- 0:04:20
624000 -- (-1743.719) [-1722.708] (-1740.739) (-1742.259) * (-1739.253) [-1748.446] (-1758.192) (-1747.170) -- 0:04:19
625000 -- (-1740.505) [-1727.405] (-1747.526) (-1731.826) * (-1739.475) [-1739.271] (-1746.453) (-1759.945) -- 0:04:18
Average standard deviation of split frequencies: 0.008165
626000 -- [-1733.505] (-1751.551) (-1760.943) (-1745.036) * (-1729.573) [-1733.986] (-1734.810) (-1752.778) -- 0:04:18
627000 -- [-1731.286] (-1736.350) (-1749.636) (-1744.855) * (-1743.430) [-1747.955] (-1733.758) (-1743.824) -- 0:04:17
628000 -- (-1734.442) (-1755.257) (-1762.470) [-1729.944] * (-1751.742) (-1742.877) [-1734.731] (-1761.757) -- 0:04:17
629000 -- [-1732.638] (-1734.350) (-1740.784) (-1747.836) * (-1746.797) [-1741.526] (-1737.646) (-1733.698) -- 0:04:16
630000 -- (-1745.024) [-1729.173] (-1734.291) (-1741.608) * [-1738.747] (-1746.605) (-1745.217) (-1743.187) -- 0:04:15
Average standard deviation of split frequencies: 0.008566
631000 -- [-1735.175] (-1746.710) (-1750.118) (-1738.781) * [-1737.691] (-1749.196) (-1741.089) (-1744.240) -- 0:04:14
632000 -- [-1730.853] (-1735.768) (-1738.649) (-1744.833) * (-1734.849) (-1757.350) (-1741.476) [-1732.392] -- 0:04:14
633000 -- [-1747.038] (-1742.637) (-1737.519) (-1763.841) * (-1730.764) (-1746.046) (-1744.433) [-1725.268] -- 0:04:13
634000 -- (-1743.015) [-1751.309] (-1735.455) (-1749.532) * [-1733.095] (-1757.614) (-1743.993) (-1760.940) -- 0:04:12
635000 -- (-1743.462) (-1741.378) [-1736.439] (-1738.454) * (-1758.581) (-1733.842) [-1727.194] (-1745.990) -- 0:04:12
Average standard deviation of split frequencies: 0.009115
636000 -- (-1753.404) (-1732.187) (-1748.021) [-1725.459] * [-1751.506] (-1734.579) (-1759.585) (-1740.717) -- 0:04:11
637000 -- (-1741.688) [-1728.577] (-1736.884) (-1736.331) * (-1738.806) (-1734.570) [-1735.571] (-1748.979) -- 0:04:11
638000 -- [-1735.484] (-1734.094) (-1742.363) (-1738.808) * (-1735.026) [-1729.881] (-1729.058) (-1748.893) -- 0:04:10
639000 -- (-1759.142) (-1739.939) (-1731.220) [-1725.759] * (-1744.810) [-1730.056] (-1743.232) (-1746.163) -- 0:04:09
640000 -- (-1771.439) (-1746.713) (-1745.284) [-1738.887] * (-1740.476) [-1735.191] (-1750.225) (-1745.218) -- 0:04:09
Average standard deviation of split frequencies: 0.008730
641000 -- (-1750.875) [-1738.714] (-1738.328) (-1747.370) * (-1737.771) [-1732.411] (-1744.287) (-1742.175) -- 0:04:08
642000 -- (-1746.810) [-1738.785] (-1729.055) (-1738.343) * (-1735.240) (-1745.692) (-1741.108) [-1744.316] -- 0:04:07
643000 -- (-1754.451) (-1752.919) (-1748.638) [-1741.272] * [-1738.088] (-1735.078) (-1746.696) (-1743.817) -- 0:04:07
644000 -- (-1742.666) (-1748.592) (-1740.687) [-1741.194] * [-1741.972] (-1733.533) (-1748.316) (-1753.827) -- 0:04:05
645000 -- (-1736.688) (-1738.795) [-1747.003] (-1749.222) * (-1746.902) (-1739.261) (-1736.054) [-1734.148] -- 0:04:05
Average standard deviation of split frequencies: 0.008698
646000 -- (-1743.311) (-1745.616) [-1741.209] (-1745.891) * (-1734.420) [-1742.874] (-1747.073) (-1738.019) -- 0:04:04
647000 -- (-1735.188) [-1748.525] (-1735.731) (-1741.778) * (-1749.197) [-1728.578] (-1745.485) (-1765.153) -- 0:04:03
648000 -- (-1734.727) (-1743.154) [-1726.798] (-1734.889) * (-1743.583) (-1732.488) [-1726.360] (-1754.182) -- 0:04:03
649000 -- (-1741.211) (-1745.226) (-1740.510) [-1729.808] * (-1732.455) (-1736.334) [-1723.239] (-1745.134) -- 0:04:02
650000 -- [-1734.628] (-1754.075) (-1747.202) (-1735.422) * (-1735.662) (-1736.102) (-1733.964) [-1739.270] -- 0:04:02
Average standard deviation of split frequencies: 0.008479
651000 -- [-1738.779] (-1726.851) (-1754.800) (-1736.082) * [-1732.537] (-1745.743) (-1750.651) (-1747.460) -- 0:04:01
652000 -- (-1747.782) (-1751.788) (-1742.485) [-1727.953] * (-1746.194) [-1745.288] (-1727.310) (-1745.562) -- 0:04:00
653000 -- (-1751.887) (-1735.211) [-1734.504] (-1746.039) * [-1734.604] (-1745.746) (-1747.217) (-1743.409) -- 0:04:00
654000 -- (-1752.260) (-1749.667) (-1752.613) [-1741.022] * (-1749.260) (-1755.963) [-1727.118] (-1742.022) -- 0:03:59
655000 -- (-1758.614) [-1727.700] (-1746.524) (-1742.251) * (-1739.763) [-1738.152] (-1741.517) (-1752.667) -- 0:03:58
Average standard deviation of split frequencies: 0.008817
656000 -- (-1757.678) (-1746.511) [-1729.961] (-1735.913) * (-1731.651) (-1741.997) (-1751.396) [-1733.589] -- 0:03:58
657000 -- [-1736.218] (-1742.201) (-1741.751) (-1743.624) * [-1727.628] (-1735.035) (-1744.273) (-1737.350) -- 0:03:57
658000 -- (-1757.409) [-1744.405] (-1753.082) (-1738.111) * [-1736.826] (-1760.161) (-1741.216) (-1733.979) -- 0:03:56
659000 -- (-1738.484) (-1742.243) (-1743.888) [-1732.674] * (-1742.804) (-1755.403) (-1736.592) [-1725.755] -- 0:03:55
660000 -- (-1739.505) (-1728.818) (-1768.277) [-1735.782] * (-1727.869) (-1740.362) [-1739.796] (-1758.945) -- 0:03:54
Average standard deviation of split frequencies: 0.008697
661000 -- (-1734.311) [-1730.220] (-1747.841) (-1739.970) * [-1736.624] (-1749.466) (-1743.078) (-1750.642) -- 0:03:54
662000 -- (-1752.965) (-1735.416) [-1732.474] (-1734.856) * (-1747.150) [-1733.146] (-1748.679) (-1762.860) -- 0:03:53
663000 -- (-1731.676) [-1729.569] (-1741.636) (-1724.034) * (-1757.077) [-1735.489] (-1735.350) (-1743.739) -- 0:03:52
664000 -- (-1741.846) [-1724.970] (-1735.034) (-1733.455) * (-1758.166) (-1737.702) (-1735.061) [-1742.536] -- 0:03:52
665000 -- (-1745.223) [-1736.963] (-1751.263) (-1746.420) * (-1748.459) (-1724.396) [-1741.183] (-1748.704) -- 0:03:51
Average standard deviation of split frequencies: 0.008494
666000 -- [-1742.298] (-1745.088) (-1751.366) (-1729.383) * [-1727.191] (-1751.836) (-1741.893) (-1740.577) -- 0:03:50
667000 -- (-1746.061) (-1740.750) (-1744.307) [-1733.913] * (-1742.292) (-1733.595) (-1747.994) [-1737.472] -- 0:03:50
668000 -- (-1736.094) [-1749.456] (-1741.497) (-1746.528) * (-1749.727) [-1736.389] (-1737.353) (-1735.308) -- 0:03:49
669000 -- (-1751.439) (-1749.932) (-1742.368) [-1737.742] * (-1742.047) (-1748.959) (-1742.844) [-1723.447] -- 0:03:48
670000 -- (-1732.524) (-1738.993) (-1750.590) [-1742.025] * [-1736.223] (-1734.932) (-1736.846) (-1745.872) -- 0:03:48
Average standard deviation of split frequencies: 0.008226
671000 -- (-1736.129) (-1740.817) [-1736.261] (-1757.258) * (-1744.539) (-1742.695) [-1745.931] (-1748.263) -- 0:03:47
672000 -- (-1746.302) (-1735.703) [-1728.530] (-1734.507) * (-1736.682) [-1732.082] (-1735.613) (-1740.922) -- 0:03:46
673000 -- [-1726.692] (-1732.237) (-1746.021) (-1741.957) * (-1754.867) (-1753.142) (-1766.792) [-1734.009] -- 0:03:45
674000 -- (-1732.655) [-1730.717] (-1755.298) (-1742.225) * (-1735.806) (-1737.974) (-1729.225) [-1741.655] -- 0:03:45
675000 -- [-1722.887] (-1738.529) (-1731.494) (-1758.435) * [-1734.491] (-1734.300) (-1744.055) (-1742.080) -- 0:03:44
Average standard deviation of split frequencies: 0.008293
676000 -- (-1726.084) [-1736.545] (-1732.835) (-1739.473) * (-1729.082) (-1752.008) (-1743.008) [-1729.557] -- 0:03:43
677000 -- [-1738.902] (-1740.027) (-1733.674) (-1741.650) * (-1752.888) [-1726.169] (-1730.938) (-1740.902) -- 0:03:43
678000 -- [-1724.305] (-1740.459) (-1733.540) (-1749.453) * (-1748.674) [-1725.787] (-1751.230) (-1749.144) -- 0:03:42
679000 -- [-1730.448] (-1747.545) (-1734.208) (-1748.472) * (-1744.020) [-1740.558] (-1730.496) (-1754.127) -- 0:03:41
680000 -- (-1741.409) (-1738.060) [-1737.677] (-1755.791) * (-1744.375) [-1734.507] (-1756.086) (-1747.433) -- 0:03:41
Average standard deviation of split frequencies: 0.008723
681000 -- (-1731.735) [-1725.492] (-1731.481) (-1749.687) * (-1755.746) (-1742.354) [-1741.278] (-1752.652) -- 0:03:40
682000 -- (-1726.675) (-1740.450) [-1727.571] (-1731.158) * [-1730.340] (-1743.105) (-1757.031) (-1740.189) -- 0:03:39
683000 -- (-1764.487) [-1740.032] (-1734.258) (-1743.724) * (-1738.331) (-1739.846) (-1753.734) [-1731.393] -- 0:03:39
684000 -- (-1752.936) (-1733.437) (-1743.119) [-1730.940] * (-1742.921) (-1758.303) [-1742.063] (-1744.789) -- 0:03:38
685000 -- (-1750.064) (-1750.589) [-1724.832] (-1734.358) * (-1732.566) (-1741.980) [-1733.834] (-1744.556) -- 0:03:37
Average standard deviation of split frequencies: 0.008355
686000 -- (-1737.026) (-1749.905) (-1739.443) [-1732.662] * [-1739.765] (-1760.928) (-1750.563) (-1742.384) -- 0:03:36
687000 -- (-1752.831) (-1744.003) (-1735.174) [-1727.748] * (-1740.126) (-1735.441) (-1743.384) [-1729.670] -- 0:03:36
688000 -- (-1742.809) [-1733.462] (-1752.816) (-1729.388) * [-1734.207] (-1752.884) (-1745.257) (-1745.918) -- 0:03:35
689000 -- (-1749.009) [-1727.602] (-1744.823) (-1735.334) * (-1747.784) (-1751.663) (-1739.164) [-1724.358] -- 0:03:34
690000 -- (-1748.368) [-1733.916] (-1744.897) (-1739.279) * (-1731.904) (-1727.868) (-1740.615) [-1730.598] -- 0:03:34
Average standard deviation of split frequencies: 0.008430
691000 -- (-1747.372) [-1726.512] (-1746.892) (-1726.720) * (-1751.513) (-1736.616) (-1756.082) [-1732.429] -- 0:03:33
692000 -- [-1748.881] (-1745.903) (-1741.964) (-1758.426) * (-1748.259) (-1739.638) (-1741.246) [-1732.642] -- 0:03:32
693000 -- (-1740.050) (-1748.971) [-1734.485] (-1752.234) * (-1737.518) [-1735.949] (-1735.627) (-1762.892) -- 0:03:32
694000 -- (-1757.473) [-1736.435] (-1726.769) (-1738.619) * (-1733.584) [-1729.595] (-1739.124) (-1752.409) -- 0:03:31
695000 -- (-1756.481) (-1740.665) (-1729.523) [-1740.355] * (-1742.440) (-1737.366) [-1752.608] (-1757.127) -- 0:03:30
Average standard deviation of split frequencies: 0.008965
696000 -- (-1742.435) (-1746.321) [-1730.449] (-1737.513) * (-1741.051) (-1742.598) [-1728.128] (-1758.030) -- 0:03:30
697000 -- (-1752.034) (-1762.415) (-1735.456) [-1738.227] * (-1740.609) [-1735.496] (-1744.349) (-1740.488) -- 0:03:29
698000 -- (-1751.434) [-1734.369] (-1767.248) (-1728.877) * (-1737.910) [-1734.047] (-1752.784) (-1768.350) -- 0:03:28
699000 -- [-1735.664] (-1741.051) (-1746.430) (-1745.957) * (-1740.389) (-1750.021) [-1730.072] (-1758.478) -- 0:03:27
700000 -- [-1746.313] (-1750.592) (-1739.202) (-1745.763) * (-1754.387) (-1756.488) (-1739.533) [-1725.669] -- 0:03:27
Average standard deviation of split frequencies: 0.008328
701000 -- [-1755.419] (-1732.009) (-1737.530) (-1742.742) * (-1749.750) [-1733.072] (-1724.690) (-1736.999) -- 0:03:26
702000 -- (-1756.514) (-1742.283) (-1739.055) [-1737.669] * [-1747.392] (-1738.276) (-1734.623) (-1759.141) -- 0:03:25
703000 -- (-1748.587) (-1754.225) [-1733.884] (-1746.074) * [-1741.388] (-1735.650) (-1752.534) (-1749.930) -- 0:03:25
704000 -- (-1760.263) (-1759.921) (-1741.401) [-1732.771] * (-1735.030) (-1748.458) [-1730.943] (-1763.054) -- 0:03:24
705000 -- (-1738.082) (-1739.455) [-1735.263] (-1737.347) * [-1722.731] (-1741.808) (-1752.719) (-1732.887) -- 0:03:23
Average standard deviation of split frequencies: 0.008522
706000 -- (-1732.810) (-1744.780) [-1739.468] (-1752.688) * (-1738.151) (-1742.534) [-1738.544] (-1736.733) -- 0:03:23
707000 -- (-1738.103) [-1735.951] (-1736.722) (-1740.760) * (-1736.331) (-1750.181) (-1755.785) [-1739.938] -- 0:03:22
708000 -- [-1728.715] (-1724.544) (-1755.093) (-1743.459) * [-1734.818] (-1734.553) (-1742.540) (-1751.451) -- 0:03:21
709000 -- [-1737.438] (-1729.536) (-1758.567) (-1740.104) * (-1736.664) [-1726.822] (-1745.390) (-1756.639) -- 0:03:21
710000 -- (-1751.465) (-1757.873) [-1739.715] (-1737.398) * (-1742.404) (-1754.395) [-1731.980] (-1754.286) -- 0:03:20
Average standard deviation of split frequencies: 0.008820
711000 -- (-1734.171) (-1753.319) [-1734.043] (-1739.322) * (-1740.916) (-1753.347) [-1728.359] (-1740.157) -- 0:03:19
712000 -- [-1725.993] (-1742.510) (-1756.368) (-1733.136) * (-1733.477) (-1738.370) [-1730.423] (-1747.848) -- 0:03:19
713000 -- [-1732.379] (-1750.124) (-1738.960) (-1733.964) * (-1741.380) (-1743.588) [-1735.984] (-1759.503) -- 0:03:18
714000 -- [-1734.396] (-1734.589) (-1741.071) (-1749.900) * (-1745.430) (-1746.571) [-1737.168] (-1744.876) -- 0:03:17
715000 -- (-1746.247) [-1734.865] (-1742.927) (-1754.582) * (-1743.520) (-1749.029) (-1740.230) [-1735.191] -- 0:03:16
Average standard deviation of split frequencies: 0.009378
716000 -- [-1737.827] (-1752.982) (-1742.082) (-1756.509) * (-1744.215) [-1733.463] (-1735.763) (-1738.635) -- 0:03:15
717000 -- [-1729.897] (-1755.190) (-1729.171) (-1746.151) * [-1744.473] (-1749.518) (-1733.544) (-1734.837) -- 0:03:15
718000 -- [-1724.100] (-1747.409) (-1757.364) (-1751.568) * (-1748.665) (-1746.667) (-1735.168) [-1740.779] -- 0:03:14
719000 -- (-1736.503) (-1740.446) (-1733.043) [-1728.320] * (-1763.950) [-1736.110] (-1751.663) (-1733.501) -- 0:03:14
720000 -- (-1730.814) (-1733.452) (-1746.538) [-1726.315] * (-1752.111) [-1741.176] (-1760.751) (-1744.965) -- 0:03:13
Average standard deviation of split frequencies: 0.008663
721000 -- (-1736.028) (-1733.808) (-1757.110) [-1737.350] * (-1759.242) (-1736.530) (-1732.978) [-1741.564] -- 0:03:12
722000 -- [-1734.358] (-1752.878) (-1731.273) (-1734.786) * (-1742.599) (-1742.970) [-1738.095] (-1737.603) -- 0:03:12
723000 -- (-1742.561) [-1739.798] (-1751.764) (-1748.007) * (-1736.705) (-1750.768) [-1734.939] (-1738.888) -- 0:03:11
724000 -- [-1743.286] (-1758.156) (-1746.397) (-1736.389) * (-1731.668) (-1743.830) (-1740.114) [-1723.236] -- 0:03:10
725000 -- (-1748.896) (-1744.209) (-1730.427) [-1743.729] * (-1759.353) (-1732.011) [-1730.173] (-1747.326) -- 0:03:10
Average standard deviation of split frequencies: 0.008564
726000 -- [-1751.986] (-1759.532) (-1733.927) (-1744.580) * (-1749.906) (-1732.271) [-1740.890] (-1745.923) -- 0:03:09
727000 -- (-1747.471) [-1734.805] (-1736.128) (-1733.690) * [-1735.611] (-1736.845) (-1749.845) (-1742.823) -- 0:03:08
728000 -- (-1739.017) (-1744.246) (-1750.708) [-1733.574] * (-1738.397) [-1730.963] (-1745.532) (-1740.596) -- 0:03:07
729000 -- (-1735.532) [-1739.152] (-1749.798) (-1731.313) * (-1746.620) (-1766.753) (-1762.914) [-1746.539] -- 0:03:06
730000 -- (-1759.581) (-1745.374) [-1733.120] (-1742.214) * [-1732.723] (-1754.363) (-1743.781) (-1748.520) -- 0:03:06
Average standard deviation of split frequencies: 0.008387
731000 -- (-1751.022) [-1733.739] (-1747.599) (-1732.710) * [-1734.609] (-1756.544) (-1737.985) (-1733.807) -- 0:03:05
732000 -- [-1735.914] (-1742.136) (-1740.112) (-1738.879) * (-1757.423) [-1747.875] (-1747.347) (-1739.690) -- 0:03:05
733000 -- [-1738.406] (-1742.403) (-1752.086) (-1742.320) * [-1745.977] (-1734.471) (-1731.901) (-1740.722) -- 0:03:04
734000 -- (-1731.778) (-1732.407) [-1735.727] (-1775.280) * (-1730.281) (-1772.137) (-1748.734) [-1737.313] -- 0:03:03
735000 -- (-1736.676) [-1726.176] (-1742.186) (-1731.092) * (-1739.381) (-1746.995) [-1743.437] (-1741.779) -- 0:03:03
Average standard deviation of split frequencies: 0.007882
736000 -- (-1765.106) [-1722.935] (-1758.540) (-1732.990) * (-1725.700) (-1746.022) [-1729.235] (-1746.987) -- 0:03:02
737000 -- [-1745.804] (-1736.123) (-1760.989) (-1733.746) * [-1739.268] (-1751.598) (-1736.054) (-1738.785) -- 0:03:01
738000 -- (-1760.565) (-1750.011) [-1732.026] (-1748.678) * (-1732.595) (-1745.173) (-1750.845) [-1729.814] -- 0:03:01
739000 -- (-1747.079) (-1740.633) [-1734.612] (-1755.225) * (-1765.754) [-1729.094] (-1744.494) (-1736.957) -- 0:03:00
740000 -- (-1758.082) [-1741.120] (-1752.928) (-1746.040) * (-1748.619) [-1724.104] (-1743.295) (-1743.408) -- 0:02:59
Average standard deviation of split frequencies: 0.007761
741000 -- [-1744.154] (-1736.614) (-1751.545) (-1739.648) * (-1741.809) (-1755.794) [-1737.930] (-1737.276) -- 0:02:58
742000 -- (-1738.486) (-1748.081) (-1750.252) [-1726.472] * (-1738.926) [-1738.772] (-1739.976) (-1742.277) -- 0:02:58
743000 -- (-1754.169) (-1756.237) (-1735.708) [-1738.325] * [-1735.425] (-1741.138) (-1749.207) (-1743.615) -- 0:02:57
744000 -- (-1738.605) [-1745.196] (-1748.535) (-1740.663) * (-1737.958) (-1751.302) (-1753.825) [-1732.018] -- 0:02:56
745000 -- [-1736.303] (-1739.517) (-1741.740) (-1753.330) * (-1747.564) [-1736.617] (-1751.211) (-1730.361) -- 0:02:56
Average standard deviation of split frequencies: 0.007915
746000 -- (-1727.366) (-1737.924) (-1752.929) [-1745.283] * [-1734.628] (-1748.428) (-1749.031) (-1747.462) -- 0:02:55
747000 -- [-1735.836] (-1731.514) (-1743.721) (-1749.929) * (-1739.953) [-1736.530] (-1742.628) (-1738.355) -- 0:02:55
748000 -- (-1753.448) (-1750.818) [-1734.919] (-1729.228) * (-1731.178) [-1743.526] (-1768.337) (-1738.104) -- 0:02:54
749000 -- (-1754.438) (-1742.236) (-1740.493) [-1738.592] * [-1737.231] (-1734.318) (-1754.177) (-1734.612) -- 0:02:53
750000 -- (-1737.929) (-1745.614) (-1746.986) [-1746.015] * (-1742.210) [-1733.720] (-1742.712) (-1740.802) -- 0:02:53
Average standard deviation of split frequencies: 0.008081
751000 -- (-1757.043) (-1741.874) [-1737.989] (-1732.887) * [-1734.096] (-1739.382) (-1747.936) (-1739.568) -- 0:02:52
752000 -- [-1726.675] (-1753.556) (-1753.013) (-1753.630) * [-1732.524] (-1736.696) (-1732.912) (-1756.895) -- 0:02:51
753000 -- (-1745.358) (-1740.231) (-1734.187) [-1747.842] * (-1730.115) (-1738.138) [-1734.676] (-1744.655) -- 0:02:50
754000 -- (-1743.539) (-1744.018) [-1733.514] (-1759.252) * (-1735.235) (-1754.601) [-1729.299] (-1735.830) -- 0:02:49
755000 -- [-1742.650] (-1745.169) (-1731.074) (-1748.214) * (-1745.484) (-1742.544) [-1732.973] (-1723.280) -- 0:02:49
Average standard deviation of split frequencies: 0.007954
756000 -- [-1746.347] (-1746.837) (-1729.166) (-1759.283) * (-1741.952) (-1731.663) [-1732.162] (-1737.192) -- 0:02:48
757000 -- [-1737.276] (-1738.466) (-1742.599) (-1744.711) * (-1744.883) (-1738.919) [-1731.923] (-1749.880) -- 0:02:47
758000 -- (-1738.720) (-1731.276) (-1756.087) [-1735.612] * [-1730.053] (-1752.699) (-1743.299) (-1746.867) -- 0:02:47
759000 -- (-1730.995) (-1738.824) [-1735.428] (-1743.916) * [-1728.778] (-1743.798) (-1744.192) (-1742.775) -- 0:02:46
760000 -- [-1726.832] (-1732.860) (-1731.242) (-1743.813) * (-1729.663) [-1738.828] (-1746.586) (-1737.387) -- 0:02:46
Average standard deviation of split frequencies: 0.008041
761000 -- (-1727.337) (-1757.168) [-1739.396] (-1735.924) * (-1728.498) (-1748.741) [-1744.286] (-1738.003) -- 0:02:45
762000 -- (-1747.782) (-1737.319) [-1740.711] (-1756.227) * [-1743.625] (-1750.217) (-1739.501) (-1730.350) -- 0:02:44
763000 -- (-1750.521) (-1745.017) [-1739.541] (-1758.073) * (-1744.529) [-1737.198] (-1759.729) (-1740.730) -- 0:02:44
764000 -- (-1747.818) (-1749.685) (-1736.152) [-1733.336] * (-1756.916) [-1734.055] (-1732.199) (-1737.048) -- 0:02:43
765000 -- (-1734.880) (-1745.304) [-1741.306] (-1755.523) * (-1746.012) (-1744.631) (-1737.761) [-1740.182] -- 0:02:42
Average standard deviation of split frequencies: 0.007764
766000 -- (-1751.764) (-1742.032) (-1733.980) [-1736.946] * [-1739.543] (-1762.310) (-1731.730) (-1748.615) -- 0:02:41
767000 -- [-1727.438] (-1746.734) (-1737.628) (-1743.321) * (-1749.819) [-1743.247] (-1740.438) (-1746.593) -- 0:02:41
768000 -- (-1748.173) [-1730.597] (-1730.182) (-1755.687) * (-1736.726) (-1756.986) (-1745.332) [-1732.290] -- 0:02:40
769000 -- [-1729.240] (-1741.132) (-1751.119) (-1730.381) * (-1738.196) (-1743.243) [-1731.958] (-1738.451) -- 0:02:39
770000 -- [-1735.664] (-1737.979) (-1750.508) (-1739.510) * (-1734.135) (-1760.865) [-1730.702] (-1743.174) -- 0:02:38
Average standard deviation of split frequencies: 0.007662
771000 -- (-1738.951) (-1747.483) (-1741.446) [-1730.437] * (-1743.401) [-1740.419] (-1729.810) (-1742.818) -- 0:02:38
772000 -- (-1742.970) (-1743.887) (-1753.790) [-1727.183] * (-1733.040) (-1750.931) (-1733.858) [-1727.136] -- 0:02:37
773000 -- (-1747.488) (-1737.636) (-1744.055) [-1735.806] * (-1742.127) (-1750.254) (-1733.060) [-1734.340] -- 0:02:37
774000 -- (-1745.471) (-1766.352) (-1745.487) [-1735.531] * [-1738.335] (-1757.869) (-1745.547) (-1734.386) -- 0:02:36
775000 -- (-1737.942) (-1757.657) [-1741.658] (-1735.925) * [-1737.959] (-1753.160) (-1762.232) (-1731.401) -- 0:02:35
Average standard deviation of split frequencies: 0.007552
776000 -- (-1747.636) (-1738.876) [-1734.922] (-1765.570) * [-1728.095] (-1744.044) (-1740.274) (-1735.119) -- 0:02:35
777000 -- (-1742.576) (-1734.368) [-1740.862] (-1761.088) * (-1733.957) (-1746.001) (-1742.673) [-1737.132] -- 0:02:34
778000 -- (-1733.791) (-1731.103) (-1747.668) [-1736.519] * (-1736.782) (-1738.390) [-1733.714] (-1738.508) -- 0:02:33
779000 -- (-1732.185) (-1742.602) (-1736.710) [-1740.084] * (-1744.125) [-1743.968] (-1737.316) (-1748.878) -- 0:02:32
780000 -- [-1729.524] (-1740.170) (-1743.518) (-1727.964) * (-1743.316) [-1731.739] (-1739.186) (-1737.671) -- 0:02:32
Average standard deviation of split frequencies: 0.007548
781000 -- (-1739.798) (-1739.944) (-1757.972) [-1739.620] * (-1726.051) (-1743.322) (-1737.452) [-1734.965] -- 0:02:31
782000 -- [-1733.126] (-1756.775) (-1749.988) (-1741.642) * (-1735.658) [-1728.059] (-1749.172) (-1746.024) -- 0:02:30
783000 -- (-1733.290) (-1749.305) [-1741.027] (-1733.148) * (-1745.353) (-1777.707) [-1737.384] (-1738.145) -- 0:02:29
784000 -- (-1738.368) (-1749.914) [-1734.712] (-1746.422) * [-1736.471] (-1771.550) (-1760.874) (-1740.681) -- 0:02:29
785000 -- (-1735.831) [-1746.627] (-1728.752) (-1744.795) * (-1741.592) (-1753.581) [-1731.569] (-1731.827) -- 0:02:28
Average standard deviation of split frequencies: 0.007465
786000 -- (-1729.586) (-1741.620) [-1738.074] (-1747.791) * (-1755.687) (-1764.501) (-1740.886) [-1732.893] -- 0:02:27
787000 -- (-1753.939) (-1740.079) (-1744.016) [-1737.882] * [-1745.199] (-1742.495) (-1741.788) (-1729.370) -- 0:02:27
788000 -- (-1755.140) (-1735.031) (-1749.017) [-1745.195] * (-1753.781) (-1766.131) (-1737.095) [-1727.114] -- 0:02:26
789000 -- (-1762.590) (-1733.459) (-1745.742) [-1751.130] * (-1771.916) (-1743.432) [-1735.269] (-1750.149) -- 0:02:25
790000 -- (-1763.219) (-1735.698) (-1745.695) [-1734.991] * (-1749.652) (-1755.775) (-1733.414) [-1736.105] -- 0:02:25
Average standard deviation of split frequencies: 0.007155
791000 -- (-1749.477) (-1731.263) (-1743.495) [-1751.450] * (-1738.371) (-1745.622) (-1730.590) [-1729.580] -- 0:02:24
792000 -- (-1757.660) [-1735.262] (-1758.935) (-1738.307) * (-1742.728) (-1743.534) [-1734.733] (-1727.072) -- 0:02:23
793000 -- (-1739.079) (-1738.447) (-1733.511) [-1735.490] * (-1725.971) [-1734.745] (-1750.420) (-1735.358) -- 0:02:23
794000 -- (-1748.968) (-1737.367) [-1734.728] (-1738.123) * (-1751.224) (-1736.757) (-1768.854) [-1721.172] -- 0:02:22
795000 -- (-1765.829) [-1737.203] (-1740.656) (-1748.218) * (-1753.633) (-1733.286) (-1758.147) [-1732.855] -- 0:02:21
Average standard deviation of split frequencies: 0.006842
796000 -- (-1761.787) (-1738.463) [-1733.935] (-1733.318) * (-1735.171) [-1735.131] (-1724.680) (-1740.277) -- 0:02:20
797000 -- (-1759.348) [-1737.131] (-1745.836) (-1738.566) * (-1760.832) [-1730.110] (-1740.625) (-1747.311) -- 0:02:20
798000 -- [-1734.868] (-1748.789) (-1741.048) (-1738.657) * [-1741.194] (-1762.566) (-1739.497) (-1744.317) -- 0:02:19
799000 -- (-1749.420) [-1734.878] (-1742.474) (-1749.304) * (-1738.931) [-1730.713] (-1764.945) (-1738.556) -- 0:02:19
800000 -- (-1729.731) [-1741.664] (-1753.048) (-1750.191) * (-1744.327) (-1742.148) [-1730.537] (-1732.597) -- 0:02:18
Average standard deviation of split frequencies: 0.007020
801000 -- (-1727.051) (-1744.312) [-1722.503] (-1748.467) * (-1744.770) (-1752.348) [-1742.582] (-1756.326) -- 0:02:17
802000 -- (-1729.231) [-1730.805] (-1738.080) (-1747.345) * [-1733.829] (-1754.115) (-1732.608) (-1734.221) -- 0:02:17
803000 -- (-1740.798) (-1730.261) (-1764.596) [-1735.691] * (-1738.981) (-1754.207) [-1731.230] (-1744.059) -- 0:02:16
804000 -- (-1752.820) (-1730.936) [-1741.012] (-1749.894) * (-1746.158) (-1750.554) [-1738.464] (-1755.190) -- 0:02:15
805000 -- (-1742.010) (-1747.482) (-1736.616) [-1731.029] * (-1740.669) (-1737.203) [-1736.971] (-1740.062) -- 0:02:14
Average standard deviation of split frequencies: 0.006973
806000 -- (-1754.062) (-1748.426) (-1739.568) [-1726.917] * [-1728.883] (-1747.402) (-1743.679) (-1742.329) -- 0:02:14
807000 -- (-1748.646) (-1757.890) (-1741.788) [-1736.146] * (-1744.929) [-1751.938] (-1737.094) (-1741.753) -- 0:02:13
808000 -- (-1761.494) (-1745.373) (-1737.106) [-1742.957] * (-1743.537) (-1731.124) (-1746.007) [-1730.923] -- 0:02:12
809000 -- (-1750.800) (-1755.051) [-1739.514] (-1733.742) * (-1737.911) (-1724.934) [-1726.835] (-1743.973) -- 0:02:11
810000 -- (-1762.422) (-1737.014) (-1730.598) [-1745.037] * [-1737.082] (-1729.694) (-1758.734) (-1765.917) -- 0:02:11
Average standard deviation of split frequencies: 0.007254
811000 -- (-1759.061) (-1740.014) [-1735.325] (-1748.998) * (-1747.595) (-1746.590) [-1742.885] (-1764.141) -- 0:02:10
812000 -- (-1767.248) (-1738.997) (-1732.112) [-1733.705] * [-1728.427] (-1748.761) (-1744.247) (-1747.288) -- 0:02:09
813000 -- (-1745.877) (-1740.971) (-1742.355) [-1738.467] * (-1749.655) [-1739.098] (-1731.603) (-1725.745) -- 0:02:09
814000 -- (-1749.717) [-1735.369] (-1745.716) (-1735.448) * (-1750.463) (-1742.598) (-1730.539) [-1742.674] -- 0:02:08
815000 -- (-1734.940) [-1733.554] (-1732.679) (-1741.691) * (-1737.380) [-1726.455] (-1752.586) (-1739.768) -- 0:02:08
Average standard deviation of split frequencies: 0.007423
816000 -- (-1750.520) (-1743.206) [-1738.015] (-1728.252) * (-1740.703) [-1728.805] (-1739.677) (-1725.635) -- 0:02:07
817000 -- (-1742.769) (-1739.357) (-1750.466) [-1733.279] * (-1735.587) (-1732.152) (-1752.580) [-1725.943] -- 0:02:06
818000 -- (-1734.927) (-1747.680) [-1731.633] (-1739.518) * (-1748.227) (-1740.458) (-1737.030) [-1726.543] -- 0:02:05
819000 -- (-1768.698) (-1733.840) (-1741.526) [-1733.719] * (-1746.202) [-1739.570] (-1744.060) (-1739.067) -- 0:02:05
820000 -- (-1754.393) (-1741.238) (-1729.081) [-1731.779] * (-1749.193) (-1730.205) [-1733.041] (-1752.697) -- 0:02:04
Average standard deviation of split frequencies: 0.007246
821000 -- (-1738.815) (-1744.912) (-1733.184) [-1730.428] * [-1736.587] (-1745.844) (-1734.913) (-1746.843) -- 0:02:03
822000 -- (-1744.417) (-1754.466) [-1725.087] (-1726.294) * (-1731.555) [-1728.678] (-1736.584) (-1753.926) -- 0:02:03
823000 -- (-1741.136) (-1769.862) [-1732.034] (-1732.516) * [-1741.881] (-1764.981) (-1732.987) (-1737.902) -- 0:02:02
824000 -- [-1735.995] (-1740.249) (-1738.369) (-1738.489) * (-1744.628) (-1741.017) [-1733.233] (-1753.261) -- 0:02:01
825000 -- [-1732.136] (-1748.259) (-1733.429) (-1754.165) * (-1738.626) (-1755.710) [-1735.423] (-1751.861) -- 0:02:01
Average standard deviation of split frequencies: 0.006746
826000 -- (-1749.310) (-1734.871) (-1737.724) [-1733.107] * (-1737.604) (-1745.684) [-1743.828] (-1748.797) -- 0:02:00
827000 -- (-1741.862) [-1729.289] (-1734.870) (-1749.593) * (-1745.981) (-1738.120) [-1739.127] (-1757.869) -- 0:01:59
828000 -- (-1751.816) (-1745.006) (-1762.509) [-1732.494] * [-1736.547] (-1739.578) (-1765.089) (-1755.682) -- 0:01:59
829000 -- [-1732.924] (-1739.362) (-1736.919) (-1742.554) * (-1743.397) (-1744.013) (-1744.398) [-1737.549] -- 0:01:58
830000 -- (-1738.296) (-1730.810) (-1740.439) [-1737.646] * (-1737.334) [-1747.236] (-1740.209) (-1736.194) -- 0:01:57
Average standard deviation of split frequencies: 0.006635
831000 -- (-1749.809) (-1746.618) (-1731.832) [-1727.029] * (-1752.835) [-1742.398] (-1751.701) (-1732.881) -- 0:01:56
832000 -- (-1734.071) (-1744.000) [-1732.757] (-1740.440) * (-1732.678) [-1729.939] (-1745.373) (-1741.998) -- 0:01:56
833000 -- (-1750.236) [-1731.204] (-1736.076) (-1742.151) * [-1738.616] (-1743.217) (-1749.211) (-1736.792) -- 0:01:55
834000 -- (-1755.760) (-1748.298) (-1724.297) [-1733.959] * (-1738.685) [-1740.682] (-1752.299) (-1738.267) -- 0:01:54
835000 -- (-1751.521) (-1755.280) [-1726.732] (-1732.193) * (-1758.187) [-1737.687] (-1736.692) (-1741.289) -- 0:01:54
Average standard deviation of split frequencies: 0.006564
836000 -- (-1749.305) [-1726.025] (-1734.495) (-1726.417) * (-1753.707) [-1747.125] (-1755.112) (-1740.325) -- 0:01:53
837000 -- (-1740.438) (-1751.061) [-1732.467] (-1754.977) * (-1738.856) [-1736.812] (-1734.409) (-1738.383) -- 0:01:52
838000 -- (-1736.960) (-1730.095) [-1734.550] (-1759.197) * (-1736.589) (-1739.283) (-1733.005) [-1728.565] -- 0:01:52
839000 -- (-1741.162) [-1727.857] (-1738.594) (-1736.437) * [-1739.593] (-1741.182) (-1738.748) (-1747.165) -- 0:01:51
840000 -- (-1738.771) [-1734.641] (-1750.625) (-1739.606) * (-1734.011) [-1733.015] (-1730.459) (-1749.899) -- 0:01:50
Average standard deviation of split frequencies: 0.007192
841000 -- (-1736.745) (-1739.048) (-1731.905) [-1727.918] * (-1751.786) (-1736.799) [-1736.010] (-1734.307) -- 0:01:50
842000 -- (-1745.644) (-1744.463) (-1728.612) [-1742.504] * (-1748.991) [-1725.243] (-1738.025) (-1776.165) -- 0:01:49
843000 -- [-1733.248] (-1740.929) (-1736.582) (-1743.138) * [-1739.751] (-1735.263) (-1743.646) (-1748.050) -- 0:01:48
844000 -- (-1740.426) (-1748.170) (-1736.075) [-1734.165] * (-1739.361) (-1741.330) [-1722.550] (-1745.384) -- 0:01:47
845000 -- (-1754.598) (-1743.075) [-1740.015] (-1729.967) * (-1739.084) (-1752.929) (-1742.497) [-1728.291] -- 0:01:47
Average standard deviation of split frequencies: 0.007132
846000 -- (-1737.076) (-1755.105) (-1733.894) [-1731.752] * (-1735.936) (-1738.688) (-1733.041) [-1734.710] -- 0:01:46
847000 -- (-1736.887) (-1754.935) [-1724.979] (-1755.915) * (-1745.404) [-1732.028] (-1750.933) (-1760.168) -- 0:01:45
848000 -- [-1728.027] (-1748.030) (-1754.493) (-1731.419) * [-1737.962] (-1762.005) (-1763.874) (-1751.052) -- 0:01:45
849000 -- (-1729.903) [-1741.294] (-1763.858) (-1742.049) * (-1750.462) (-1742.196) (-1736.373) [-1731.076] -- 0:01:44
850000 -- (-1741.466) [-1744.598] (-1744.876) (-1754.558) * (-1737.409) [-1735.484] (-1747.154) (-1727.844) -- 0:01:43
Average standard deviation of split frequencies: 0.007010
851000 -- (-1750.751) (-1743.240) (-1750.092) [-1737.536] * [-1725.716] (-1743.788) (-1742.340) (-1748.706) -- 0:01:42
852000 -- (-1751.614) (-1761.958) (-1746.954) [-1728.969] * (-1734.034) (-1754.082) [-1726.954] (-1756.994) -- 0:01:42
853000 -- (-1741.411) (-1735.813) (-1738.468) [-1721.372] * [-1744.596] (-1743.616) (-1734.928) (-1750.314) -- 0:01:41
854000 -- (-1744.990) [-1735.405] (-1736.912) (-1756.404) * [-1733.908] (-1752.713) (-1744.176) (-1735.941) -- 0:01:41
855000 -- (-1744.323) (-1735.730) (-1742.999) [-1743.285] * (-1749.280) (-1736.340) (-1738.343) [-1733.425] -- 0:01:40
Average standard deviation of split frequencies: 0.007269
856000 -- (-1740.794) (-1732.477) [-1738.386] (-1751.493) * (-1741.616) (-1728.563) [-1743.079] (-1734.821) -- 0:01:39
857000 -- (-1730.541) [-1736.079] (-1742.098) (-1752.181) * (-1739.271) (-1743.462) (-1744.729) [-1734.432] -- 0:01:38
858000 -- (-1733.741) (-1754.583) [-1733.289] (-1749.710) * (-1742.401) (-1748.463) (-1731.372) [-1743.453] -- 0:01:38
859000 -- (-1728.277) (-1733.661) [-1732.726] (-1751.265) * (-1741.569) (-1736.460) [-1733.823] (-1738.231) -- 0:01:37
860000 -- (-1744.591) [-1736.462] (-1742.708) (-1753.580) * [-1723.904] (-1733.839) (-1755.495) (-1745.029) -- 0:01:36
Average standard deviation of split frequencies: 0.007216
861000 -- [-1741.779] (-1771.073) (-1743.091) (-1739.393) * [-1737.793] (-1746.771) (-1744.748) (-1752.456) -- 0:01:36
862000 -- (-1744.294) (-1760.133) (-1751.971) [-1732.236] * (-1734.798) (-1752.049) (-1756.778) [-1724.151] -- 0:01:35
863000 -- (-1745.225) (-1746.924) (-1763.027) [-1733.491] * (-1742.060) (-1741.262) (-1734.682) [-1734.307] -- 0:01:34
864000 -- (-1736.407) (-1741.580) (-1761.305) [-1736.080] * (-1736.002) (-1744.737) (-1726.537) [-1742.777] -- 0:01:34
865000 -- (-1732.907) [-1725.498] (-1746.336) (-1751.205) * (-1747.726) [-1735.472] (-1742.368) (-1738.122) -- 0:01:33
Average standard deviation of split frequencies: 0.007117
866000 -- (-1742.314) (-1741.228) (-1732.703) [-1742.535] * (-1739.814) (-1741.834) (-1730.025) [-1743.514] -- 0:01:32
867000 -- (-1737.885) (-1742.597) [-1729.526] (-1747.597) * (-1735.169) (-1753.187) [-1731.468] (-1741.665) -- 0:01:32
868000 -- (-1747.387) (-1740.770) (-1741.255) [-1738.402] * (-1753.891) (-1740.548) [-1734.421] (-1728.604) -- 0:01:31
869000 -- (-1743.759) (-1746.983) [-1731.869] (-1741.404) * (-1732.519) (-1739.840) [-1736.262] (-1751.466) -- 0:01:30
870000 -- [-1736.622] (-1768.749) (-1729.893) (-1737.904) * (-1739.334) (-1742.702) [-1727.641] (-1736.778) -- 0:01:29
Average standard deviation of split frequencies: 0.006619
871000 -- (-1747.308) (-1733.433) [-1733.022] (-1748.690) * (-1742.239) (-1757.514) [-1736.655] (-1734.307) -- 0:01:29
872000 -- (-1726.277) (-1747.149) [-1744.258] (-1755.896) * (-1751.947) (-1759.109) (-1744.446) [-1737.069] -- 0:01:28
873000 -- [-1739.565] (-1741.017) (-1734.423) (-1747.058) * (-1742.855) (-1746.747) (-1731.965) [-1733.504] -- 0:01:27
874000 -- (-1754.568) [-1750.631] (-1743.277) (-1737.288) * (-1741.043) (-1738.058) (-1742.475) [-1728.919] -- 0:01:27
875000 -- [-1731.532] (-1755.071) (-1740.731) (-1760.638) * (-1754.055) (-1743.311) [-1737.252] (-1745.272) -- 0:01:26
Average standard deviation of split frequencies: 0.006727
876000 -- [-1735.285] (-1743.793) (-1744.439) (-1740.000) * (-1748.639) [-1731.293] (-1747.831) (-1745.348) -- 0:01:25
877000 -- (-1761.364) (-1733.262) (-1734.366) [-1731.304] * (-1747.034) (-1742.591) (-1744.606) [-1739.747] -- 0:01:25
878000 -- (-1757.623) (-1741.567) [-1742.283] (-1736.828) * [-1729.115] (-1757.098) (-1755.974) (-1739.889) -- 0:01:24
879000 -- (-1741.360) (-1734.367) [-1736.663] (-1765.620) * (-1732.698) (-1729.247) (-1737.246) [-1730.307] -- 0:01:23
880000 -- [-1758.020] (-1740.789) (-1742.956) (-1760.337) * (-1751.635) (-1732.356) (-1745.345) [-1740.320] -- 0:01:23
Average standard deviation of split frequencies: 0.006370
881000 -- (-1742.291) [-1728.391] (-1754.293) (-1742.344) * (-1741.991) (-1732.094) [-1742.671] (-1747.665) -- 0:01:22
882000 -- (-1737.101) (-1751.777) [-1737.581] (-1735.722) * (-1735.476) (-1746.491) (-1733.231) [-1740.615] -- 0:01:21
883000 -- (-1740.265) (-1748.664) [-1734.471] (-1730.855) * (-1753.723) (-1731.402) (-1739.380) [-1733.383] -- 0:01:20
884000 -- (-1741.492) (-1750.917) [-1731.914] (-1738.897) * (-1749.942) (-1733.969) [-1729.535] (-1738.134) -- 0:01:20
885000 -- [-1735.576] (-1738.960) (-1736.836) (-1746.993) * (-1739.118) [-1731.589] (-1735.974) (-1738.163) -- 0:01:19
Average standard deviation of split frequencies: 0.006761
886000 -- [-1735.074] (-1745.885) (-1742.091) (-1731.448) * [-1748.153] (-1740.085) (-1764.907) (-1730.858) -- 0:01:18
887000 -- (-1744.060) (-1735.727) [-1736.786] (-1752.064) * (-1749.460) [-1736.176] (-1747.572) (-1739.240) -- 0:01:18
888000 -- (-1736.566) (-1736.137) (-1728.672) [-1729.586] * (-1726.427) (-1737.368) [-1751.578] (-1744.068) -- 0:01:17
889000 -- (-1757.735) [-1737.865] (-1743.629) (-1737.556) * (-1734.828) (-1736.619) (-1728.953) [-1745.366] -- 0:01:16
890000 -- (-1733.572) (-1739.521) (-1755.522) [-1721.542] * (-1741.206) [-1729.016] (-1737.938) (-1743.411) -- 0:01:16
Average standard deviation of split frequencies: 0.006298
891000 -- (-1748.346) [-1745.505] (-1747.333) (-1736.255) * [-1738.692] (-1736.046) (-1746.933) (-1739.131) -- 0:01:15
892000 -- (-1751.721) (-1734.293) (-1751.135) [-1742.672] * [-1729.732] (-1736.074) (-1740.676) (-1751.224) -- 0:01:14
893000 -- (-1744.294) [-1736.716] (-1738.924) (-1734.282) * [-1730.563] (-1744.009) (-1726.721) (-1739.235) -- 0:01:14
894000 -- (-1748.455) [-1729.183] (-1741.324) (-1741.545) * (-1737.124) [-1740.016] (-1721.197) (-1745.446) -- 0:01:13
895000 -- (-1738.194) (-1750.891) [-1757.785] (-1745.262) * [-1738.172] (-1740.215) (-1736.504) (-1757.449) -- 0:01:12
Average standard deviation of split frequencies: 0.005958
896000 -- (-1749.511) [-1739.115] (-1748.400) (-1743.807) * (-1749.579) (-1744.439) [-1730.456] (-1736.821) -- 0:01:11
897000 -- [-1735.620] (-1731.984) (-1742.223) (-1750.287) * (-1741.720) (-1743.614) [-1733.639] (-1736.101) -- 0:01:11
898000 -- (-1743.823) (-1752.966) (-1741.003) [-1734.400] * (-1724.861) (-1755.442) [-1740.923] (-1733.051) -- 0:01:10
899000 -- (-1732.966) (-1768.631) (-1739.827) [-1731.553] * (-1744.136) (-1739.296) [-1736.142] (-1763.191) -- 0:01:09
900000 -- (-1738.590) [-1742.952] (-1736.959) (-1731.170) * (-1745.573) (-1739.159) [-1740.411] (-1756.861) -- 0:01:09
Average standard deviation of split frequencies: 0.005905
901000 -- (-1747.647) (-1746.629) [-1728.848] (-1750.907) * (-1743.412) (-1750.008) (-1743.847) [-1725.939] -- 0:01:08
902000 -- (-1736.768) (-1752.037) (-1736.969) [-1737.478] * (-1746.946) (-1760.848) [-1739.208] (-1738.312) -- 0:01:07
903000 -- [-1731.127] (-1740.656) (-1740.963) (-1740.407) * (-1743.302) (-1750.686) (-1742.824) [-1739.492] -- 0:01:07
904000 -- [-1733.168] (-1755.513) (-1727.405) (-1747.482) * (-1753.385) (-1738.279) [-1736.453] (-1732.936) -- 0:01:06
905000 -- [-1741.904] (-1726.643) (-1734.427) (-1750.869) * (-1754.038) (-1740.961) (-1741.690) [-1737.308] -- 0:01:05
Average standard deviation of split frequencies: 0.005670
906000 -- (-1752.859) [-1731.237] (-1732.951) (-1761.836) * (-1744.009) (-1755.079) (-1732.087) [-1731.784] -- 0:01:05
907000 -- [-1740.999] (-1753.417) (-1735.826) (-1739.685) * [-1728.176] (-1751.882) (-1733.679) (-1734.709) -- 0:01:04
908000 -- [-1728.914] (-1736.522) (-1746.365) (-1749.346) * (-1736.816) (-1751.829) [-1736.271] (-1743.337) -- 0:01:03
909000 -- [-1731.071] (-1739.458) (-1737.706) (-1738.343) * (-1744.991) [-1742.017] (-1751.579) (-1736.711) -- 0:01:02
910000 -- [-1732.666] (-1737.229) (-1725.067) (-1736.297) * (-1737.336) (-1755.856) (-1732.037) [-1730.420] -- 0:01:02
Average standard deviation of split frequencies: 0.005747
911000 -- [-1735.250] (-1742.866) (-1746.015) (-1732.464) * (-1754.538) (-1744.153) [-1736.631] (-1744.963) -- 0:01:01
912000 -- [-1732.791] (-1736.261) (-1752.381) (-1736.036) * (-1737.489) [-1732.527] (-1738.219) (-1744.617) -- 0:01:00
913000 -- (-1750.956) (-1746.548) (-1743.010) [-1732.740] * (-1744.891) [-1737.872] (-1742.998) (-1738.087) -- 0:01:00
914000 -- (-1754.692) (-1751.613) [-1742.996] (-1745.068) * (-1735.885) [-1723.983] (-1741.952) (-1737.403) -- 0:00:59
915000 -- (-1732.368) (-1745.033) [-1737.540] (-1739.119) * [-1733.545] (-1743.856) (-1763.325) (-1737.630) -- 0:00:58
Average standard deviation of split frequencies: 0.005872
916000 -- (-1738.616) (-1740.667) [-1745.621] (-1742.658) * [-1721.339] (-1738.768) (-1737.877) (-1737.080) -- 0:00:58
917000 -- (-1730.854) (-1762.746) [-1729.825] (-1753.836) * (-1729.561) (-1745.342) [-1733.779] (-1745.275) -- 0:00:57
918000 -- (-1734.215) [-1741.096] (-1740.332) (-1752.683) * (-1731.861) (-1730.284) [-1743.351] (-1751.545) -- 0:00:56
919000 -- [-1738.347] (-1740.668) (-1763.002) (-1749.345) * (-1756.281) [-1737.948] (-1740.883) (-1741.641) -- 0:00:56
920000 -- (-1735.969) [-1734.402] (-1747.580) (-1741.110) * (-1755.155) (-1738.783) (-1750.570) [-1736.652] -- 0:00:55
Average standard deviation of split frequencies: 0.006050
921000 -- [-1725.341] (-1737.090) (-1740.869) (-1742.730) * (-1755.061) (-1738.862) (-1742.059) [-1722.696] -- 0:00:54
922000 -- (-1751.046) [-1734.823] (-1735.056) (-1737.673) * [-1741.433] (-1748.013) (-1734.257) (-1742.976) -- 0:00:53
923000 -- (-1753.787) (-1756.304) (-1756.359) [-1731.342] * (-1725.280) [-1733.516] (-1748.323) (-1752.079) -- 0:00:53
924000 -- (-1771.783) (-1767.904) [-1733.097] (-1750.020) * (-1740.206) [-1731.694] (-1729.076) (-1764.851) -- 0:00:52
925000 -- [-1740.682] (-1768.756) (-1744.371) (-1734.125) * [-1731.056] (-1748.188) (-1757.858) (-1743.770) -- 0:00:51
Average standard deviation of split frequencies: 0.006200
926000 -- (-1742.814) (-1754.209) (-1753.339) [-1730.904] * (-1743.563) (-1735.838) [-1732.699] (-1738.808) -- 0:00:51
927000 -- (-1753.906) (-1756.996) (-1744.077) [-1737.618] * (-1746.979) (-1736.391) (-1747.215) [-1733.616] -- 0:00:50
928000 -- (-1745.684) [-1737.784] (-1747.878) (-1738.741) * [-1746.186] (-1738.092) (-1752.954) (-1742.403) -- 0:00:49
929000 -- (-1760.345) (-1739.928) (-1747.225) [-1731.346] * (-1731.296) (-1744.693) [-1739.798] (-1744.006) -- 0:00:49
930000 -- (-1742.953) (-1743.779) [-1741.169] (-1750.544) * (-1735.098) (-1739.761) (-1744.737) [-1728.030] -- 0:00:48
Average standard deviation of split frequencies: 0.006065
931000 -- [-1737.968] (-1748.463) (-1731.567) (-1758.738) * (-1734.677) (-1759.483) (-1757.753) [-1738.082] -- 0:00:47
932000 -- (-1760.639) [-1726.171] (-1733.818) (-1745.846) * [-1728.553] (-1734.706) (-1753.566) (-1744.685) -- 0:00:46
933000 -- (-1741.297) (-1740.342) [-1736.643] (-1745.432) * [-1732.182] (-1751.649) (-1755.434) (-1740.159) -- 0:00:46
934000 -- (-1738.175) [-1744.325] (-1748.829) (-1738.301) * (-1733.285) [-1727.138] (-1739.081) (-1744.296) -- 0:00:45
935000 -- (-1750.280) (-1735.755) (-1738.541) [-1736.783] * [-1736.202] (-1750.144) (-1729.192) (-1738.349) -- 0:00:44
Average standard deviation of split frequencies: 0.005915
936000 -- (-1738.424) (-1745.006) (-1736.040) [-1738.478] * (-1741.142) (-1738.930) [-1732.971] (-1738.764) -- 0:00:44
937000 -- [-1737.592] (-1735.563) (-1742.961) (-1759.997) * (-1746.711) [-1730.939] (-1731.560) (-1751.121) -- 0:00:43
938000 -- (-1745.663) (-1737.018) (-1737.092) [-1737.381] * (-1747.867) (-1732.159) [-1736.925] (-1739.723) -- 0:00:42
939000 -- (-1754.445) [-1733.321] (-1740.206) (-1737.730) * [-1728.510] (-1752.957) (-1742.479) (-1748.243) -- 0:00:42
940000 -- (-1738.138) (-1752.820) (-1739.006) [-1738.462] * (-1739.622) (-1767.702) [-1743.178] (-1749.652) -- 0:00:41
Average standard deviation of split frequencies: 0.005821
941000 -- (-1732.908) (-1742.630) [-1731.827] (-1736.434) * (-1740.154) (-1753.639) [-1736.001] (-1754.139) -- 0:00:40
942000 -- (-1744.864) (-1730.042) [-1733.175] (-1738.400) * (-1744.690) (-1742.260) [-1734.898] (-1750.354) -- 0:00:40
943000 -- (-1752.696) (-1747.749) [-1742.435] (-1733.342) * (-1765.099) (-1730.714) (-1744.312) [-1739.576] -- 0:00:39
944000 -- [-1732.961] (-1757.239) (-1741.013) (-1752.374) * (-1743.007) (-1743.757) [-1735.453] (-1739.750) -- 0:00:38
945000 -- (-1749.869) (-1730.996) [-1739.134] (-1746.433) * (-1729.097) (-1742.200) [-1742.512] (-1737.338) -- 0:00:38
Average standard deviation of split frequencies: 0.005520
946000 -- [-1736.972] (-1733.011) (-1750.033) (-1747.027) * (-1738.993) (-1754.347) [-1732.968] (-1739.994) -- 0:00:37
947000 -- [-1728.488] (-1731.289) (-1744.705) (-1747.174) * (-1754.046) (-1754.433) (-1739.995) [-1724.329] -- 0:00:36
948000 -- (-1740.874) (-1745.073) (-1742.744) [-1741.870] * (-1747.037) (-1743.178) (-1741.230) [-1732.439] -- 0:00:35
949000 -- [-1731.119] (-1742.034) (-1762.954) (-1754.087) * (-1745.257) [-1738.372] (-1747.646) (-1746.289) -- 0:00:35
950000 -- (-1744.448) [-1734.525] (-1748.666) (-1738.850) * (-1743.485) (-1752.618) (-1734.319) [-1733.755] -- 0:00:34
Average standard deviation of split frequencies: 0.005233
951000 -- (-1753.521) [-1736.880] (-1757.420) (-1742.498) * [-1760.617] (-1737.222) (-1740.051) (-1730.675) -- 0:00:33
952000 -- (-1754.071) [-1737.747] (-1737.292) (-1743.833) * (-1755.576) [-1742.933] (-1737.829) (-1745.078) -- 0:00:33
953000 -- [-1744.062] (-1741.037) (-1754.713) (-1753.707) * (-1747.197) [-1731.306] (-1734.203) (-1740.404) -- 0:00:32
954000 -- [-1744.396] (-1742.739) (-1749.084) (-1750.282) * (-1732.483) [-1743.743] (-1767.519) (-1737.265) -- 0:00:31
955000 -- (-1748.050) (-1761.506) (-1753.332) [-1739.493] * (-1745.881) (-1728.689) (-1746.788) [-1730.775] -- 0:00:31
Average standard deviation of split frequencies: 0.005323
956000 -- [-1743.141] (-1750.092) (-1738.971) (-1744.861) * (-1750.002) (-1737.518) (-1729.435) [-1730.917] -- 0:00:30
957000 -- (-1746.834) (-1742.818) [-1732.821] (-1747.941) * (-1733.284) (-1748.111) (-1736.707) [-1727.206] -- 0:00:29
958000 -- (-1749.790) (-1741.272) (-1732.776) [-1726.895] * (-1748.618) (-1736.190) (-1735.269) [-1737.657] -- 0:00:29
959000 -- (-1736.097) [-1741.067] (-1748.770) (-1729.197) * (-1742.982) (-1750.214) (-1736.477) [-1724.437] -- 0:00:28
960000 -- (-1743.451) [-1735.237] (-1748.944) (-1732.018) * (-1751.246) (-1739.574) (-1726.536) [-1729.484] -- 0:00:27
Average standard deviation of split frequencies: 0.005320
961000 -- [-1733.627] (-1735.683) (-1754.798) (-1737.636) * (-1744.607) (-1740.130) (-1750.435) [-1724.099] -- 0:00:26
962000 -- (-1756.264) [-1725.428] (-1741.638) (-1751.848) * [-1729.500] (-1745.424) (-1754.868) (-1744.795) -- 0:00:26
963000 -- (-1736.777) (-1745.764) [-1728.955] (-1750.445) * (-1731.616) [-1734.141] (-1744.615) (-1752.728) -- 0:00:25
964000 -- (-1744.562) (-1741.932) [-1735.965] (-1745.021) * (-1742.946) (-1742.041) [-1742.401] (-1757.658) -- 0:00:24
965000 -- (-1760.499) (-1739.932) [-1736.761] (-1735.073) * (-1743.792) (-1741.529) [-1735.923] (-1738.626) -- 0:00:24
Average standard deviation of split frequencies: 0.005493
966000 -- (-1735.876) [-1730.980] (-1739.424) (-1742.062) * [-1742.650] (-1751.457) (-1736.210) (-1729.899) -- 0:00:23
967000 -- (-1743.104) (-1736.638) (-1740.992) [-1733.371] * (-1744.122) [-1732.093] (-1748.457) (-1746.177) -- 0:00:22
968000 -- (-1739.535) (-1738.949) [-1737.308] (-1743.566) * [-1745.509] (-1765.241) (-1738.439) (-1736.789) -- 0:00:22
969000 -- (-1741.293) (-1742.348) [-1737.790] (-1739.461) * (-1738.249) (-1746.972) [-1737.734] (-1750.108) -- 0:00:21
970000 -- (-1760.025) (-1738.175) (-1735.378) [-1730.736] * (-1744.076) [-1743.556] (-1724.511) (-1739.817) -- 0:00:20
Average standard deviation of split frequencies: 0.005132
971000 -- (-1745.370) (-1742.967) (-1749.891) [-1737.401] * (-1740.896) [-1731.217] (-1733.740) (-1744.519) -- 0:00:20
972000 -- (-1735.384) [-1730.053] (-1745.991) (-1736.265) * (-1746.821) (-1735.533) (-1728.985) [-1744.609] -- 0:00:19
973000 -- (-1738.585) [-1727.106] (-1756.641) (-1746.706) * (-1749.548) (-1742.483) (-1754.574) [-1735.744] -- 0:00:18
974000 -- [-1730.281] (-1732.940) (-1755.601) (-1753.461) * (-1744.178) [-1741.478] (-1745.396) (-1741.100) -- 0:00:17
975000 -- (-1741.293) (-1737.346) [-1726.475] (-1733.929) * (-1745.016) (-1743.242) [-1739.459] (-1737.714) -- 0:00:17
Average standard deviation of split frequencies: 0.005313
976000 -- (-1742.295) (-1726.882) (-1754.787) [-1728.160] * (-1735.033) [-1734.842] (-1746.900) (-1751.108) -- 0:00:16
977000 -- (-1752.195) (-1741.444) [-1737.840] (-1746.333) * (-1731.689) [-1733.890] (-1745.447) (-1734.159) -- 0:00:15
978000 -- (-1742.553) [-1730.532] (-1754.082) (-1739.579) * (-1733.434) (-1752.012) [-1729.183] (-1744.180) -- 0:00:15
979000 -- (-1739.059) [-1726.861] (-1741.926) (-1744.971) * (-1744.099) (-1748.491) (-1747.759) [-1736.940] -- 0:00:14
980000 -- (-1742.107) [-1734.361] (-1753.658) (-1736.329) * (-1752.955) (-1750.728) [-1727.876] (-1730.875) -- 0:00:13
Average standard deviation of split frequencies: 0.005541
981000 -- (-1742.089) [-1738.501] (-1729.185) (-1740.115) * (-1762.745) [-1738.993] (-1732.892) (-1741.063) -- 0:00:13
982000 -- (-1736.922) (-1741.813) [-1729.598] (-1738.378) * (-1747.398) (-1746.784) (-1725.746) [-1746.378] -- 0:00:12
983000 -- [-1729.185] (-1743.847) (-1744.753) (-1731.482) * (-1749.549) (-1738.300) [-1736.476] (-1749.520) -- 0:00:11
984000 -- [-1732.107] (-1735.523) (-1744.708) (-1746.531) * (-1747.137) (-1737.966) [-1726.980] (-1752.142) -- 0:00:11
985000 -- (-1738.879) (-1745.489) [-1730.622] (-1751.127) * [-1743.420] (-1736.513) (-1747.452) (-1741.427) -- 0:00:10
Average standard deviation of split frequencies: 0.005725
986000 -- (-1737.235) (-1752.536) (-1736.461) [-1734.349] * (-1754.531) (-1751.327) [-1734.605] (-1747.348) -- 0:00:09
987000 -- (-1739.704) [-1754.100] (-1743.044) (-1751.648) * (-1741.216) (-1739.461) [-1723.476] (-1758.406) -- 0:00:08
988000 -- (-1736.225) (-1762.896) (-1760.018) [-1747.951] * (-1740.936) [-1723.369] (-1730.284) (-1742.733) -- 0:00:08
989000 -- (-1729.830) [-1734.320] (-1751.206) (-1742.918) * (-1749.617) [-1735.185] (-1737.155) (-1745.856) -- 0:00:07
990000 -- (-1738.992) (-1741.913) [-1727.075] (-1741.376) * [-1731.364] (-1724.700) (-1762.355) (-1753.218) -- 0:00:06
Average standard deviation of split frequencies: 0.005649
991000 -- [-1737.480] (-1732.765) (-1737.247) (-1741.563) * [-1746.651] (-1738.403) (-1762.719) (-1746.541) -- 0:00:06
992000 -- (-1735.026) (-1747.871) (-1751.006) [-1747.766] * [-1734.345] (-1735.458) (-1734.462) (-1747.060) -- 0:00:05
993000 -- [-1733.436] (-1744.712) (-1738.474) (-1756.375) * (-1734.454) [-1729.865] (-1741.947) (-1731.628) -- 0:00:04
994000 -- (-1753.981) [-1732.174] (-1741.712) (-1749.456) * (-1747.759) (-1740.044) (-1742.848) [-1726.540] -- 0:00:04
995000 -- (-1739.142) [-1730.240] (-1742.935) (-1737.158) * (-1740.486) (-1739.954) [-1743.704] (-1757.571) -- 0:00:03
Average standard deviation of split frequencies: 0.005680
996000 -- (-1733.017) [-1736.777] (-1726.968) (-1759.017) * [-1733.968] (-1750.613) (-1748.366) (-1746.014) -- 0:00:02
997000 -- (-1766.196) [-1741.089] (-1732.219) (-1746.986) * [-1736.109] (-1742.911) (-1742.497) (-1749.663) -- 0:00:02
998000 -- (-1747.020) (-1743.130) (-1747.128) [-1734.251] * [-1727.913] (-1751.754) (-1753.628) (-1740.484) -- 0:00:01
999000 -- (-1754.002) (-1752.583) (-1746.297) [-1739.070] * (-1730.849) (-1738.312) (-1734.345) [-1735.107] -- 0:00:00
1000000 -- (-1738.027) [-1744.216] (-1732.671) (-1747.765) * (-1726.095) (-1738.517) [-1738.094] (-1749.584) -- 0:00:00
Average standard deviation of split frequencies: 0.005665
Analysis completed in 11 mins 31 seconds
Analysis used 690.22 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -1712.93
Likelihood of best state for "cold" chain of run 2 was -1715.54
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
53.7 % ( 42 %) Dirichlet(Revmat{all})
69.0 % ( 57 %) Slider(Revmat{all})
27.5 % ( 33 %) Dirichlet(Pi{all})
29.9 % ( 29 %) Slider(Pi{all})
51.2 % ( 16 %) Multiplier(Alpha{1,2})
55.9 % ( 27 %) Multiplier(Alpha{3})
54.2 % ( 32 %) Slider(Pinvar{all})
41.4 % ( 45 %) ExtSPR(Tau{all},V{all})
29.7 % ( 37 %) ExtTBR(Tau{all},V{all})
45.1 % ( 40 %) NNI(Tau{all},V{all})
32.4 % ( 31 %) ParsSPR(Tau{all},V{all})
27.3 % ( 29 %) Multiplier(V{all})
60.8 % ( 55 %) Nodeslider(V{all})
25.9 % ( 17 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
55.0 % ( 36 %) Dirichlet(Revmat{all})
70.2 % ( 60 %) Slider(Revmat{all})
27.5 % ( 21 %) Dirichlet(Pi{all})
29.3 % ( 27 %) Slider(Pi{all})
52.5 % ( 36 %) Multiplier(Alpha{1,2})
55.7 % ( 19 %) Multiplier(Alpha{3})
54.2 % ( 31 %) Slider(Pinvar{all})
41.4 % ( 45 %) ExtSPR(Tau{all},V{all})
29.6 % ( 35 %) ExtTBR(Tau{all},V{all})
45.1 % ( 55 %) NNI(Tau{all},V{all})
32.5 % ( 33 %) ParsSPR(Tau{all},V{all})
27.3 % ( 38 %) Multiplier(V{all})
60.7 % ( 69 %) Nodeslider(V{all})
25.7 % ( 29 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.50 0.19 0.05
2 | 166741 0.52 0.21
3 | 166498 167161 0.54
4 | 166729 166415 166456
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.50 0.19 0.06
2 | 166144 0.53 0.22
3 | 167341 165958 0.55
4 | 167083 166305 167169
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -1731.48
| 1 |
| 1 1 |
| 2 |
| 1 2 2 |
| 1 2 2 2 2 1 |
| * 11 2 2 2212 11* 12 2 2 1 |
| 2 2 12 1 1 1 11 2 1 |
|* 1 1 2 2 1 1 1 2 2 2 1 2 |
| 12 2 1 2 22 2 2 |
| 2 2 2 2 1 * 2|
| 1 1 1 2 1 1 1 1 2 |
| 12 2 2 2 1 1 1 1 * 1 |
| 1 1 2 2 2 2 2 1 2 |
| 1 1 1 2 2 2 1 1 1|
| 1 1 2 1 2 1 2 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -1737.93
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1724.52 -1752.39
2 -1723.66 -1753.85
--------------------------------------
TOTAL -1724.00 -1753.36
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.278122 0.002114 0.191178 0.366025 0.272813 876.53 902.72 1.000
r(A<->C){all} 0.093047 0.000917 0.037563 0.153071 0.090115 483.30 618.18 1.000
r(A<->G){all} 0.176609 0.001685 0.100856 0.253602 0.173454 671.24 741.79 1.001
r(A<->T){all} 0.115028 0.000845 0.061922 0.172992 0.112520 849.11 884.67 1.001
r(C<->G){all} 0.049683 0.000510 0.011886 0.095426 0.047016 777.76 843.32 1.000
r(C<->T){all} 0.491884 0.003130 0.390368 0.602615 0.492479 578.90 615.97 1.001
r(G<->T){all} 0.073749 0.000525 0.034110 0.120788 0.072257 646.30 771.20 1.000
pi(A){all} 0.251933 0.000267 0.218910 0.281945 0.251891 746.28 1040.35 1.000
pi(C){all} 0.196877 0.000208 0.169838 0.224832 0.196993 1156.46 1230.78 1.000
pi(G){all} 0.220162 0.000242 0.192575 0.253997 0.219909 1008.22 1152.60 1.000
pi(T){all} 0.331028 0.000286 0.300268 0.366390 0.330962 1067.89 1169.62 1.000
alpha{1,2} 0.399984 0.072807 0.001041 0.862348 0.332357 1113.05 1117.84 1.001
alpha{3} 1.622766 1.037589 0.160060 3.639401 1.398902 889.38 952.66 1.000
pinvar{all} 0.615427 0.009939 0.413722 0.778483 0.635412 318.02 368.73 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C11
4 -- C12
5 -- C13
6 -- C14
7 -- C15
8 -- C16
9 -- C17
10 -- C18
11 -- C19
12 -- C2
13 -- C20
14 -- C21
15 -- C22
16 -- C23
17 -- C24
18 -- C25
19 -- C26
20 -- C3
21 -- C4
22 -- C5
23 -- C6
24 -- C7
25 -- C8
26 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
--------------------------------
1 -- .*************************
2 -- .*........................
3 -- ..*.......................
4 -- ...*......................
5 -- ....*.....................
6 -- .....*....................
7 -- ......*...................
8 -- .......*..................
9 -- ........*.................
10 -- .........*................
11 -- ..........*...............
12 -- ...........*..............
13 -- ............*.............
14 -- .............*............
15 -- ..............*...........
16 -- ...............*..........
17 -- ................*.........
18 -- .................*........
19 -- ..................*.......
20 -- ...................*......
21 -- ....................*.....
22 -- .....................*....
23 -- ......................*...
24 -- .......................*..
25 -- ........................*.
26 -- .........................*
27 -- ...*.....*...........*....
28 -- .........*...........*....
29 -- ..*........**.**..*.*.....
30 -- .....*..........*.........
31 -- .*******.*****************
32 -- .*..*.**..*..*...*.*....**
33 -- ...........*...*....*.....
34 -- .**.*.**..******.****.****
35 -- ............*.*...*.......
36 -- .*..*.*...*..*...*......*.
37 -- .**.****..***********.****
38 -- .**.*.**..******.****.*.**
39 -- ..*........**.**..*.*.*...
40 -- ..*........*...*....*.....
41 -- ...............*....*.....
42 -- ...........*...*..........
43 -- ............*.....*.......
44 -- ...........*........*.....
45 -- ..............*...*.......
46 -- ............*.*...........
47 -- ..*........**.**..*.*.**..
48 -- .......*...........*.....*
49 -- ..*........**.**..*.*..*..
50 -- ..*.........*.*...*.......
51 -- ...........**.**..*.*.....
52 -- .......*...........*......
53 -- ...................*.....*
54 -- .......*.................*
55 -- .*..*.**..*..*...*......*.
56 -- .*..*.*...*..*...*......**
57 -- .*..*.*...*..*...*.*....**
58 -- .*..*.**..*..*...*.*....*.
59 -- .*..*.*...*..*...*.*....*.
60 -- .*..*.**..*..*...*......**
61 -- ...*.*...*......*....*....
62 -- .................*......*.
63 -- ......*.................*.
64 -- ..........*..*............
65 -- ....*.*...................
--------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
27 3002 1.000000 0.000000 1.000000 1.000000 2
28 3002 1.000000 0.000000 1.000000 1.000000 2
29 3002 1.000000 0.000000 1.000000 1.000000 2
30 3002 1.000000 0.000000 1.000000 1.000000 2
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 2999 0.999001 0.000471 0.998668 0.999334 2
33 2997 0.998334 0.001413 0.997335 0.999334 2
34 2977 0.991672 0.001413 0.990673 0.992672 2
35 2492 0.830113 0.004711 0.826782 0.833444 2
36 2433 0.810460 0.001413 0.809460 0.811459 2
37 2377 0.791805 0.001413 0.790806 0.792805 2
38 2141 0.713191 0.002355 0.711526 0.714857 2
39 1943 0.647235 0.003298 0.644903 0.649567 2
40 1583 0.527315 0.007066 0.522318 0.532312 2
41 1036 0.345103 0.002827 0.343105 0.347102 2
42 1022 0.340440 0.007537 0.335110 0.345769 2
43 942 0.313791 0.016959 0.301799 0.325783 2
44 941 0.313458 0.005182 0.309793 0.317122 2
45 916 0.305130 0.004711 0.301799 0.308461 2
46 894 0.297801 0.017901 0.285143 0.310460 2
47 825 0.274817 0.001413 0.273817 0.275816 2
48 770 0.256496 0.009422 0.249833 0.263158 2
49 769 0.256163 0.003298 0.253831 0.258494 2
50 744 0.247835 0.001884 0.246502 0.249167 2
51 675 0.224850 0.005182 0.221186 0.228514 2
52 653 0.217522 0.003298 0.215190 0.219853 2
53 647 0.215523 0.008009 0.209860 0.221186 2
54 619 0.206196 0.002355 0.204530 0.207861 2
55 542 0.180546 0.012248 0.171885 0.189207 2
56 534 0.177881 0.014133 0.167888 0.187875 2
57 533 0.177548 0.006124 0.173218 0.181879 2
58 522 0.173884 0.019786 0.159893 0.187875 2
59 518 0.172552 0.006595 0.167888 0.177215 2
60 517 0.172219 0.003298 0.169887 0.174550 2
61 353 0.117588 0.000471 0.117255 0.117921 2
62 293 0.097602 0.009893 0.090606 0.104597 2
63 287 0.095603 0.008009 0.089940 0.101266 2
64 278 0.092605 0.012248 0.083944 0.101266 2
65 275 0.091606 0.014604 0.081279 0.101932 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.007341 0.000014 0.001398 0.014787 0.006777 1.000 2
length{all}[2] 0.001370 0.000002 0.000000 0.004042 0.000933 1.002 2
length{all}[3] 0.001341 0.000002 0.000001 0.004044 0.000922 1.000 2
length{all}[4] 0.026894 0.000075 0.011906 0.043617 0.025838 1.000 2
length{all}[5] 0.001341 0.000002 0.000001 0.003911 0.000967 1.000 2
length{all}[6] 0.001368 0.000002 0.000000 0.004161 0.000940 1.000 2
length{all}[7] 0.001378 0.000002 0.000000 0.004084 0.000952 1.002 2
length{all}[8] 0.001402 0.000002 0.000001 0.004228 0.000962 1.000 2
length{all}[9] 0.003962 0.000008 0.000003 0.009116 0.003355 1.000 2
length{all}[10] 0.001672 0.000003 0.000000 0.004982 0.001203 1.000 2
length{all}[11] 0.001318 0.000002 0.000001 0.004008 0.000871 1.000 2
length{all}[12] 0.002676 0.000004 0.000083 0.006625 0.002178 1.000 2
length{all}[13] 0.001307 0.000002 0.000001 0.004102 0.000869 1.000 2
length{all}[14] 0.001313 0.000002 0.000000 0.004027 0.000871 1.000 2
length{all}[15] 0.001350 0.000002 0.000001 0.004149 0.000934 1.003 2
length{all}[16] 0.001392 0.000002 0.000001 0.004153 0.000941 1.000 2
length{all}[17] 0.001346 0.000002 0.000000 0.004086 0.000910 1.000 2
length{all}[18] 0.001327 0.000002 0.000000 0.004048 0.000902 1.000 2
length{all}[19] 0.001360 0.000002 0.000000 0.004122 0.000923 1.000 2
length{all}[20] 0.001392 0.000002 0.000000 0.003993 0.000982 1.000 2
length{all}[21] 0.001344 0.000002 0.000000 0.004081 0.000933 1.000 2
length{all}[22] 0.002438 0.000004 0.000002 0.006332 0.001941 1.000 2
length{all}[23] 0.003422 0.000008 0.000001 0.008743 0.002800 1.000 2
length{all}[24] 0.020923 0.000052 0.008277 0.034979 0.020169 1.000 2
length{all}[25] 0.001316 0.000002 0.000000 0.004129 0.000905 1.000 2
length{all}[26] 0.001372 0.000002 0.000001 0.004190 0.000922 1.000 2
length{all}[27] 0.028790 0.000093 0.013166 0.048242 0.027680 1.000 2
length{all}[28] 0.029011 0.000083 0.012839 0.046706 0.027929 1.000 2
length{all}[29] 0.017142 0.000041 0.005337 0.029226 0.016379 1.000 2
length{all}[30] 0.016970 0.000041 0.005725 0.029905 0.016131 1.000 2
length{all}[31] 0.025558 0.000073 0.010955 0.042076 0.024456 1.000 2
length{all}[32] 0.009095 0.000021 0.001345 0.017600 0.008404 1.000 2
length{all}[33] 0.004163 0.000006 0.000406 0.008964 0.003688 1.000 2
length{all}[34] 0.012095 0.000035 0.001924 0.023398 0.011186 1.000 2
length{all}[35] 0.003728 0.000006 0.000079 0.008370 0.003192 1.004 2
length{all}[36] 0.002659 0.000004 0.000022 0.006418 0.002180 1.000 2
length{all}[37] 0.006850 0.000020 0.000002 0.015247 0.006092 1.000 2
length{all}[38] 0.009953 0.000025 0.001875 0.020140 0.009238 1.000 2
length{all}[39] 0.005385 0.000011 0.000121 0.011764 0.004664 1.001 2
length{all}[40] 0.002620 0.000005 0.000003 0.006897 0.002064 1.000 2
length{all}[41] 0.001358 0.000002 0.000001 0.003979 0.000945 0.999 2
length{all}[42] 0.001293 0.000002 0.000001 0.003896 0.000862 0.999 2
length{all}[43] 0.001346 0.000002 0.000002 0.003870 0.000939 1.000 2
length{all}[44] 0.001376 0.000002 0.000001 0.004110 0.000929 1.002 2
length{all}[45] 0.001365 0.000002 0.000003 0.004135 0.000962 1.000 2
length{all}[46] 0.001328 0.000002 0.000001 0.003983 0.000879 1.000 2
length{all}[47] 0.007530 0.000016 0.000986 0.015994 0.006975 0.999 2
length{all}[48] 0.001859 0.000003 0.000006 0.005358 0.001377 0.999 2
length{all}[49] 0.007836 0.000018 0.001444 0.016723 0.007045 0.999 2
length{all}[50] 0.001353 0.000002 0.000001 0.004197 0.000902 1.002 2
length{all}[51] 0.001459 0.000002 0.000002 0.004396 0.001039 0.999 2
length{all}[52] 0.001367 0.000002 0.000003 0.004226 0.000939 1.001 2
length{all}[53] 0.001286 0.000002 0.000003 0.003811 0.000907 0.999 2
length{all}[54] 0.001401 0.000002 0.000001 0.004149 0.000925 0.999 2
length{all}[55] 0.001484 0.000002 0.000005 0.004174 0.000999 0.998 2
length{all}[56] 0.001429 0.000002 0.000001 0.004445 0.000964 0.999 2
length{all}[57] 0.001292 0.000002 0.000001 0.004222 0.000847 1.005 2
length{all}[58] 0.001419 0.000002 0.000000 0.004433 0.000930 1.001 2
length{all}[59] 0.001363 0.000002 0.000000 0.004113 0.000968 1.008 2
length{all}[60] 0.001384 0.000002 0.000003 0.004434 0.000939 0.998 2
length{all}[61] 0.004882 0.000024 0.000014 0.013345 0.003741 0.998 2
length{all}[62] 0.001315 0.000002 0.000004 0.003736 0.000926 0.998 2
length{all}[63] 0.001456 0.000002 0.000007 0.004343 0.001009 0.998 2
length{all}[64] 0.001433 0.000002 0.000010 0.004542 0.000934 1.003 2
length{all}[65] 0.001243 0.000002 0.000002 0.004168 0.000743 1.010 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.005665
Maximum standard deviation of split frequencies = 0.019786
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.010
Clade credibility values:
/---------------------------------------------------------------------- C1 (1)
|
|---------------------------------------------------------------------- C17 (9)
|
| /-------- C10 (2)
| |
| |-------- C13 (5)
| |
| |-------- C15 (7)
| |
| /---81--+-------- C19 (11)
| | |
| | |-------- C21 (14)
| | |
| | |-------- C25 (18)
| | |
| /----------100---------+ \-------- C8 (25)
| | |
| | |---------------- C16 (8)
| | |
| | |---------------- C3 (20)
| | |
+ | \---------------- C9 (26)
| |
| | /---------------- C11 (3)
| /---71--+ |
| | | /--53--+ /-------- C2 (12)
| | | | | |
| | | | \--100--+-------- C23 (16)
| | | | |
| | | /--100--+ \-------- C4 (21)
| | | | |
| | | | | /-------- C20 (13)
| /--99--+ | | | |
| | | \---65--+ \------83------+-------- C22 (15)
| | | | |
| | | | \-------- C26 (19)
| | | |
| /---79--+ | \------------------------------- C6 (23)
| | | |
| | | \----------------------------------------------- C7 (24)
| | |
| | | /-------- C14 (6)
\--100--+ \---------------------100---------------------+
| \-------- C24 (17)
|
| /---------------- C12 (4)
| |
\---------------------100---------------------+ /-------- C18 (10)
\--100--+
\-------- C5 (22)
Phylogram (based on average branch lengths):
/------ C1 (1)
|
|--- C17 (9)
|
| /- C10 (2)
| |
| |- C13 (5)
| |
| |- C15 (7)
| |
| /-+- C19 (11)
| | |
| | |- C21 (14)
| | |
| | |- C25 (18)
| | |
| /------+ \- C8 (25)
| | |
| | |- C16 (8)
| | |
| | |- C3 (20)
| | |
+ | \- C9 (26)
| |
| | /- C11 (3)
| /-------+ |
| | | /-+ /-- C2 (12)
| | | | | |
| | | | \--+- C23 (16)
| | | | |
| | | /-------------+ \- C4 (21)
| | | | |
| | | | | /- C20 (13)
| /---------+ | | | |
| | | \---+ \--+- C22 (15)
| | | | |
| | | | \- C26 (19)
| | | |
| /----+ | \-- C6 (23)
| | | |
| | | \----------------- C7 (24)
| | |
| | | /- C14 (6)
\--------------------+ \-------------+
| \- C24 (17)
|
| /---------------------- C12 (4)
| |
\-----------------------+ /- C18 (10)
\-----------------------+
\-- C5 (22)
|-------| 0.010 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
Running FUBAR...
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\
***************** TYPES OF STANDARD ANALYSES *****************
(1) Selection Analyses
(2) Evolutionary Hypothesis Testing
(3) Relative evolutionary rate inference
(4) Coevolutionary analysis
(5) Basic Analyses
(6) Codon Selection Analyses
(7) Compartmentalization
(8) Data File Tools
(9) Miscellaneous
(10) Model Comparison
(11) Kernel Analysis Tools
(12) Molecular Clock
(13) Phylogeny Reconstruction
(14) Positive Selection
(15) Recombination
(16) Selection/Recombination
(17) Relative Rate
(18) Relative Ratio
(19) Substitution Rates
Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' *****************
(1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution).
(2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood).
(3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting).
(4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection).
(5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification).
(6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood).
(7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation).
Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types):
Analysis Description
--------------------
Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a
coding sequence alignment to determine whether some sites have been
subject to pervasive purifying or diversifying selection. v2.1
introduces two more methods for estimating the posterior distribution of
grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation
Bayes approximation (fastest). Please note that a FUBAR analysis
generates a cache and a results JSON file in the same directory as
directory as the original alignment. HyPhy needs to have write
privileges to this directory. For example if the original file is in
/home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there
will also exist FUBAR-generated files
/home/sergei/FUBAR/data/pol.nex.FUBAR.json,
/home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide
checkpointing so that a partially completed analysis can be restarted.
- __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree
(one per partition)
- __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring
selection (2013), Mol Biol Evol. 30(5):1196-205
- __Written by__: Sergei L Kosakovsky Pond
- __Contact Information__: spond@temple.edu
- __Analysis Version__: 2.1
####Choose Genetic Code
1. [**Universal**] Universal code. (Genebank transl_table=1).
2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2).
3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3).
4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4).
5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5).
6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6).
7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9).
8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10).
9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12).
10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13).
11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14).
12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15).
13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16).
14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21).
15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22).
16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23).
17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24).
18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25).
19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26).
>Please choose an option (or press q to cancel selection):
>Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`)
>A tree was found in the data file: `(C1,C17,((((((C10,C13,C15,C19,C21,C25,C8),C16,C3,C9),(((C11,(C2,C23,C4)),(C20,C22,C26)),C6)),C7),(C14,C24)),(C12,(C18,C5))))`
>Would you like to use it (y/n)?
>Loaded a multiple sequence alignment with **26** sequences, **228** codons, and **1** partitions from `/data//pss_subsets/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/results/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1.fna`
> FUBAR will write cache and result files to _/data//pss_subsets/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/results/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/results/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1.fna.FUBAR.json_, respectively
> Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer):
####Posterior estimation method
1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation)
2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed)
3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default)
>Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5):
### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model
* Log(L) = -1745.44, AIC-c = 3587.14 (48 estimated parameters)
* Tree length (expected substitutions/site) for partition 1 : 0.203
### Computing the phylogenetic likelihood function on the grid
* Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid
* Best scaling achieved for
* synonymous rate = 2.815
* non-synonymous rate = 0.357
* Computing conditional site likelihoods on a 20 x 20 rate grid
### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights
* Using the following settings
* Dirichlet alpha : 0.5
### Tabulating site-level results
----
## FUBAR inferred no sites under subject to positive selection at posterior probability >= 0.9
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.09 sec, SCORE=1000, Nseq=26, Len=228
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus MSSTTPAPQTVYQWTADVAVRFLKEWNFLLGIILLFITIILQFGYTSRSM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
JHM_WU_Dns2_M_AFO11511_1_1947_08_14_USA_Unknown_Murine_coronavirus MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
MHV_2_NA_AAF19388_1_NA_NA_Unknown_Murine_coronavirus MTSTTQAPQPVYQWTADEAIRFLKEWNFSLGIILLFVTIILQFGYTSRSM
MHV_1_NA_ACN89740_1_NA_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
MHV_3_NA_ACN89749_1_NA_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYLWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
MHV_BHKR_lab_USA_icA59_L94P_2012_M_AGT17742_1_2012_10_25_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
MHV_A59_M_NP_045301_1_NA_NA_Unknown_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus0 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus1 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus2 MSSTTPAPQPVYQWTADEAVRFLKEWNFSLGIILLFVTIILQFGYTSRSM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus3 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus4 MSSTTPAPQPIYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus5 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus6 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus7 MSSTTSAPQTVYQWTADVAVRFLKEWNFLLGIILLFITIILQFGYTSRSM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus8 MNSTTQAPQPVYQWTADEAIRFLKEWNFSLGIILLFVTIILQFGYTSRSM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus9 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus0 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus1 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus2 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus3 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus4 MSSTTPAPQPIYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus5 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus6 MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM
*.*** ** .:* **** *::******* *******:*************
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
JHM_WU_Dns2_M_AFO11511_1_1947_08_14_USA_Unknown_Murine_coronavirus FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
MHV_2_NA_AAF19388_1_NA_NA_Unknown_Murine_coronavirus FVYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
MHV_1_NA_ACN89740_1_NA_USA_Mouse_Murine_coronavirus FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
MHV_3_NA_ACN89749_1_NA_USA_Mouse_Murine_coronavirus FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
MHV_BHKR_lab_USA_icA59_L94P_2012_M_AGT17742_1_2012_10_25_USA_Mouse_Murine_coronavirus FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
MHV_A59_M_NP_045301_1_NA_NA_Unknown_Murine_coronavirus FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus0 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus1 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus2 FIYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus3 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus4 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus5 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus6 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus7 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus8 FVYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus9 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus0 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus1 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus2 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus3 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus4 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus5 FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus6 FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM
*:******:******* ****:**********************:::***
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus YFVNSIRLFIRTGSWWSFNPETNNLMCIDVKGTVYVRPIIEDYHTLTATN
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIDDYHTLTATI
A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
JHM_WU_Dns2_M_AFO11511_1_1947_08_14_USA_Unknown_Murine_coronavirus YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
MHV_2_NA_AAF19388_1_NA_NA_Unknown_Murine_coronavirus YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
MHV_1_NA_ACN89740_1_NA_USA_Mouse_Murine_coronavirus YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
MHV_3_NA_ACN89749_1_NA_USA_Mouse_Murine_coronavirus YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
MHV_BHKR_lab_USA_icA59_L94P_2012_M_AGT17742_1_2012_10_25_USA_Mouse_Murine_coronavirus YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
MHV_A59_M_NP_045301_1_NA_NA_Unknown_Murine_coronavirus YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus0 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus1 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus2 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus3 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus4 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus5 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus6 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus7 YFVNSIRLFIRTGSWWSFNPETNNLMCIDVKGTVYVRPIIEDYHTLTATN
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus8 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus9 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus0 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus1 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus2 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus3 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus4 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus5 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus6 YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI
*****************************:**********:********
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus VRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
JHM_WU_Dns2_M_AFO11511_1_1947_08_14_USA_Unknown_Murine_coronavirus IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
MHV_2_NA_AAF19388_1_NA_NA_Unknown_Murine_coronavirus IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
MHV_1_NA_ACN89740_1_NA_USA_Mouse_Murine_coronavirus IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
MHV_3_NA_ACN89749_1_NA_USA_Mouse_Murine_coronavirus IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
MHV_BHKR_lab_USA_icA59_L94P_2012_M_AGT17742_1_2012_10_25_USA_Mouse_Murine_coronavirus IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
MHV_A59_M_NP_045301_1_NA_NA_Unknown_Murine_coronavirus IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus0 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus1 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus2 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus3 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus4 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus5 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus6 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus7 VRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus8 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus9 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus0 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus1 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus2 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus3 IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus4 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus5 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus6 IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF
:***:*********************************************
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus AVYVKSKVGNYRLPSNKPSGADTALLRI
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus AVYVKSKVGNYRLPSNKPSGADTVLLRI
A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus AVYVKSKVGNYRLPSNKPSGADTALLRI
JHM_WU_Dns2_M_AFO11511_1_1947_08_14_USA_Unknown_Murine_coronavirus AVYVKSKVGNYRLPSNKPSGADTVLLRI
MHV_2_NA_AAF19388_1_NA_NA_Unknown_Murine_coronavirus AVYVKSKVGNYRLPSNKPSGMDTALLRI
MHV_1_NA_ACN89740_1_NA_USA_Mouse_Murine_coronavirus AVYVKSKVGNYRLPSNKPSGADTALLRI
MHV_3_NA_ACN89749_1_NA_USA_Mouse_Murine_coronavirus AVYVKSKVGNYRLPSNKPSGADTALLRI
MHV_BHKR_lab_USA_icA59_L94P_2012_M_AGT17742_1_2012_10_25_USA_Mouse_Murine_coronavirus AVYVKSKVGNYRLPSNKPSGADTALLRT
MHV_A59_M_NP_045301_1_NA_NA_Unknown_Murine_coronavirus AVYVKSKVGNYRLPSNKPSGADTALLRI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus0 AVYVKSKVGNYRLPSNKPSGADTALLRT
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus1 AVYVKSKVGNYRLPSNKPSGADTALLRI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus2 AIYVKSKVGNYRLPSNKPSGSDTALLRI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus3 AVYVKSKVGNYRLPSNKPSGADTALLRT
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus4 AVYVKSKVGNYRLPSNKPSGADTALLRI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus5 AVYVKSKVGNYRLPSNKPSGADTALLRT
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus6 AVYVKSKVGNYRLPSNKPSGADTALLRI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus7 AVYVKSKVGNYRLPSNKPSGADTALLRI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus8 AVYVKSKVGNYRLPSNKPSGMDTALLRI
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus9 AVYVKSKVGNYRLPSNKPSGADTALLRT
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus0 AVYVKSKVGNYRLPSNKPSGADTALLRI
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus1 AVYVKSKVGNYRLPSNKPSGADTALLRT
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus2 AVYVKSKVGNYRLPSNKPSGADTALLRI
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus3 AVYVKSKVGNYRLPSNKPSGADTVLLRI
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus4 AVYVKSKVGNYRLPSNKPSGADTALLRI
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus5 AVYVKSKVGNYRLPSNKPSGADTALLRT
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus6 AVYVKSKVGNYRLPSNKPSGADTALLRI
*:****************** **.***
>681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus ATGAGTAGTACCACTCCAGCCCCCCAGACTGTCTATCAATGGACGGCCGATGTGGCAGTTCGATTCCTTAAGGAATGGAACTTCTTGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATATATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTTAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATGTGGATTATGTATTTTGTTAATAGCATAAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCTGAAACAAACAACCTAATGTGTATAGATGTGAAAGGTACTGTGTATGTTAGACCCATTATTGAAGATTACCATACACTAACAGCCACAAATGTACGTGGCCACCTTTATATGCAAGGTGTTAAGCTAGGCACTGGCTTCTCTTTGTCTGATTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCGCACCTTTGCACTTATAAGCGCGCATTTTTAGACAAGGTTGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGTAATTACCGACTGCCCTCAAATAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC >JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus ATGAGTAGTACCACTCAGGCCCCAGGGCCCGTCTACCAATGGACAGCCGACGAGGCCGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATCTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGATTATTGTTTTGTGTATGTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCGTTGTAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTAATGTGCATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGATGATTACCATACACTAACAGCCACTATTATTCGTGGCCACTTCTATATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCTGCTTATGTTACAGTAGCTAAGGTTTCCCACCTTTGCACTTATAAGCGTGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGTATTGTTGAGAATC >A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus ATGAGTAGTACTACTCAGGCCCCAGAGCCCGTCTATCAATGGACGGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATCTGGATTATGTATTTTGTTAATAGCATAAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCACACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC >JHM_WU_Dns2_M_AFO11511_1_1947_08_14_USA_Unknown_Murine_coronavirus ATGAGTAGTACCACTCAGGCCCCAGGGCCCGTCTACCAATGGACAGCCGACGAGGCCGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATCTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGATTATTGTTTTGTGTATGTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCGTTGTAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTAATGTGCATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACTTCTATATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCTGCTTATGTTACAGTAGCTAAGGTTTCCCACCTTTGCACTTATAAGCGTGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGTATTGTTGAGAATC >MHV_2_NA_AAF19388_1_NA_NA_Unknown_Murine_coronavirus ATGACTAGTACCACTCAGGCTCCACAGCCTGTTTATCAGTGGACGGCTGATGAGGCAATTCGATTCCTTAAGGAATGGAATTTCTCTCTCGGCATTATACTACTTTTTGTTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTGTTTATGTTGTGAAAATGATACTTTTGTGGCTTATGTGGCCACTAACTATTGTTTTGTGTATTTTTAACTGCGTCTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTATAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGCAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTAATGTGTATAGATATGAAAGGTACTGTGTATGTTAGACCCATTATAGAGGATTACCATACACTAACAGCCACTATCATTCGTGGTCACCTCTATATGCAAGGTGTTAAGCTAGGCACTGGCTTCTCTTTGTCTGATTTGCCTGCTTATGTTACAGTTGCTAAGGTGTCTCACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAATAAACCGAGTGGCATGGACACCGCATTGTTGAGAATC >MHV_1_NA_ACN89740_1_NA_USA_Mouse_Murine_coronavirus ATGAGTAGTACCACTCAGGCCCCAGAGCCCGTCTATCAATGGACAGCCGACGAGGCCGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATCTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTTAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATGTGGATTATGTATTTTGTTAATAGCATTAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTAATGTGCATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCACACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC >MHV_3_NA_ACN89749_1_NA_USA_Mouse_Murine_coronavirus ATGAGTAGTACCACTCAGGCCCCAGAGCCCGTCTATCTATGGACAGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTTAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTAATGTGCATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATCATTCGTGGCCACCTCTATATGCAAGGTGTTAAGCTAGGCACTGGCTTCTCTTTGTCGGATCTGCCTGCTTATGTTACAGTAGCTAAGGTTTCGCACCTCTGCACTTATAAGCGCGCATTTTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTCTATGTGAAGTCCAAGGTCGGAAACTACCGACTGCCCTCAAATAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC >MHV_BHKR_lab_USA_icA59_L94P_2012_M_AGT17742_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGAGTAGTACTACTCAGGCCCCAGAGCCCGTCTATCAATGGACGGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATCTGGATTATGTATTTTGTTAATAGCATAAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCACACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAACC >MHV_A59_M_NP_045301_1_NA_NA_Unknown_Murine_coronavirus ATGAGTAGTACTACTCAGGCCCCAGAGCCCGTCTATCAATGGACGGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATCTGGATTATGTATTTTGTTAATAGCATAAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCACACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC >MHV_BHKR_lab_USA_icA59_17Cl1_2012_M_AGT17731_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGAGTAGTACTACTCAGGCCCCAGAGCCCGTCTATCAATGGACGGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATCTGGATTATGTATTTTGTTAATAGCATAAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCACACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAACC >MHV_JHM_IA_NA_ACN89768_1_NA_USA_Mouse_Murine_coronavirus ATGAGTAGTACCACTCAGGCCCCAGGGCCCGTCTACCAATGGACAGCCGACGAGGCCGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATCTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGATTATTGTTTTGTGTATGTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCGTTGTAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTAATGTGCATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTATATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCTGCTTATGTTACAGTAGCTAAGGTTTCCCACCTTTGCACTTATAAGCGTGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC >MHV_MI_M_BAJ04700_1_1994_Australia_Mouse_Murine_coronavirus ATGAGTAGTACCACACCAGCTCCCCAGCCGGTTTACCAGTGGACTGCCGATGAGGCTGTTCGATTCCTTAAGGAATGGAACTTCTCTCTCGGCATTATACTACTTTTTGTTACTATCATACTACAGTTCGGTTATACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATACTCCTGTGGCTTATGTGGCCACTGACTATTGTTTTGTGTATTTTTAATTGCGTCTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGCAGCTGGTGGAGCTTCAACCCTGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACTGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATCATTCGTGGCCACCTCTATATGCAAGGTGTTAAGCTAGGCACTGGCTTTTCTTTGTCGGATTTGCCTGCTTATGTTACAGTAGCTAAGGTTTCGCACCTCTGCACTTATAAGCGCGCATTTTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTATTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAATAAACCGAGTGGCTCGGACACCGCATTGTTGAGAATC >MHV_BHKR_lab_USA_icA59_ns2M_2012_M_AGT17753_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGAGTAGTACTACTCAGGCCCCAGAGCCCGTCTATCAATGGACGGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATCTGGATTATGTATTTTGTTAATAGCATAAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCACACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAACC >MHV_S_3239_17_NA_AFD97611_1_NA_NA_Unknown_Murine_coronavirus ATGAGTAGTACCACTCCAGCCCCCCAGCCGATCTATCAATGGACGGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTATACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTTTTTACTATAGTGTCCATTATAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCTGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACTGGTTTCTCCTTGTCAGATTTGCCTGCTTATGTTACAGTTGCTAAGGTGTCGCACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAATAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC >ML_10_ORF6_AAF69348_1_NA_NA_Unknown_Murine_coronavirus ATGAGTAGTACTACTCAGGCCCCAGAGCCCGTCTATCAATGGACGGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATCTGGATTATGTATTTTGTTAATAGCATAAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCACACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAACC >ML_11_orf6_AAF68927_1_NA_NA_Unknown_Murine_coronavirus ATGAGTAGTACTACTCAGGCCCCAGAGCCCGTCTATCAATGGACGGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATCTGGATTATGTATTTTGTTAATAGCATAAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCACACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC >Parker_M_YP_003029851_1_NA_NA_Rat_Murine_coronavirus ATGAGTAGTACCACTTCAGCCCCCCAGACTGTCTATCAATGGACGGCCGATGTGGCAGTTCGATTCCTTAAGGAATGGAACTTCTTGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATATATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTTAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATGTGGATTATGTATTTTGTTAATAGCATAAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTAATGTGTATAGATGTGAAAGGTACTGTGTATGTTAGACCCATTATTGAAGATTACCATACACTAACAGCCACAAATGTACGTGGCCACCTCTATATGCAAGGTGTTAAGCTAGGCACTGGCTTCTCTTTGTCTGATTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCGCACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTTGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC >Penn_97_1_ORF6_AAF69337_1_NA_NA_Unknown_Murine_coronavirus ATGAATAGTACCACTCAGGCTCCACAGCCTGTTTATCAGTGGACGGCTGATGAGGCAATTCGATTCCTTAAGGAATGGAATTTCTCTCTCGGCATTATACTACTTTTTGTTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTGTTTATGTTGTGAAAATGATACTTTTGTGGCTTATGTGGCCACTAACTATTGTTTTGTGTATTTTTAACTGCGTCTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTATAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGCAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTAATGTGTATAGATATGAAAGGTACTGTGTATGTTAGACCCATTATAGAGGATTACCATACACTAACAGCCACTATCATTCGTGGTCACCTCTATATGCAAGGTGTTAAGCTAGGCACTGGCTTCTCTTTGTCTGATTTGCCTGCTTATGTTACAGTTGCTAAGGTGTCTCACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAATAAACCGAGTGGCATGGACACCGCATTGTTGAGAATC >RA59_R13_NA_ACN89692_1_2006_01_01_USA_Mouse_Murine_coronavirus ATGAGTAGTACTACTCAGGCCCCAGAGCCCGTCTATCAATGGACGGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATCTGGATTATGTATTTTGTTAATAGCATAAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCACACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAACC >RJHM_A_NA_ACN89700_1_NA_USA_Mouse_Murine_coronavirus ATGAGTAGTACCACTCAGGCCCCAGGGCCCGTCTACCAATGGACGGCCGACGAGGCCGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATCTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGATTATTGTTTTGTGTATGTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCGTTGTAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTAATGTGCATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTATATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCTGCTTATGTTACAGTAGCTAAGGTCTCCCACCTTTGCACTTATAAGCGTGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC >RA59_SJHM_NA_ACN89707_1_NA_USA_Mouse_Murine_coronavirus ATGAGTAGTACTACTCAGGCCCCAGAGCCCGTCTATCAATGGACGGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATCTGGATTATGTATTTTGTTAATAGCATAAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCACACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAACC >SA59_RJHM_NA_ACN89725_1_NA_USA_Mouse_Murine_coronavirus ATGAGTAGTACCACTCAGGCCCCAGGGCCCGTCTACCAATGGACGGCCGACGAGGCCGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATCTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGATTATTGTTTTGTGTATGTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCGTTGTAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTAATGTGCATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTATATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCTGCTTATGTTACAGTAGCTAAGGTCTCCCACCTTTGCACTTATAAGCGTGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC >UNKNOWN_AC_000192_M_YP_209237_1_NA_NA_Unknown_Murine_coronavirus ATGAGTAGTACCACTCAGGCCCCAGGGCCCGTCTACCAATGGACAGCCGACGAGGCCGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATCTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGATTATTGTTTTGTGTATGTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCGTTGTAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTAATGTGCATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACTTCTATATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCTGCTTATGTTACAGTAGCTAAGGTTTCCCACCTTTGCACTTATAAGCGTGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGTATTGTTGAGAATC >S_M_ADI59792_1_NA_USA_Mouse_Murine_coronavirus ATGAGTAGTACCACTCCAGCCCCCCAGCCGATCTATCAATGGACGGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTATACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTTTTTACTATAGTGTCCATTATAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCTGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACTGGTTTCTCCTTGTCAGATTTGCCTGCTTATGTTACAGTTGCTAAGGTGTCGCACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAATAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC >repJHM_RA59_NA_ACN89781_1_NA_USA_Mouse_Murine_coronavirus ATGAGTAGTACTACTCAGGCCCCAGAGCCCGTCTATCAATGGACGGCCGACGAGGCAGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATTTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGACTATTGTTTTGTGTATTTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCATTGTAATCTGGATTATGTATTTTGTTAATAGCATAAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTTATGTGTATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTACATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCCGCTTATGTTACAGTTGCTAAGGTGTCACACCTTTGCACTTATAAGCGCGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAACC >repA59_RJHM_NA_ACN89721_1_NA_USA_Mouse_Murine_coronavirus ATGAGTAGTACCACTCAGGCCCCAGGGCCCGTCTACCAATGGACGGCCGACGAGGCCGTTCAATTCCTTAAGGAATGGAACTTCTCGTTGGGCATTATACTACTCTTTATTACTATCATACTACAGTTCGGTTACACGAGCCGTAGCATGTTTATCTATGTTGTGAAAATGATAATCTTGTGGTTAATGTGGCCACTGATTATTGTTTTGTGTATGTTCAATTGCGTGTATGCGCTAAATAATGTGTATCTTGGATTTTCTATAGTGTTTACTATAGTGTCCGTTGTAATGTGGATTATGTATTTTGTTAATAGCATCAGGTTGTTTATCAGGACTGGTAGCTGGTGGAGCTTCAACCCCGAAACAAACAACCTAATGTGCATAGATATGAAAGGTACCGTGTATGTTAGACCCATTATTGAGGATTACCATACACTAACAGCCACTATTATTCGTGGCCACCTCTATATGCAAGGTGTTAAGCTAGGCACCGGTTTCTCTTTGTCTGACTTGCCTGCTTATGTTACAGTAGCTAAGGTCTCCCACCTTTGCACTTATAAGCGTGCATTCTTAGACAAGGTAGACGGTGTTAGCGGTTTTGCTGTTTATGTGAAGTCCAAGGTCGGAAATTACCGACTGCCCTCAAACAAACCGAGTGGCGCGGACACCGCATTGTTGAGAATC
>681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus MSSTTPAPQTVYQWTADVAVRFLKEWNFLLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDVKGTVYVRPIIEDYHTLTATN VRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI >JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIDDYHTLTATI IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTVLLRI >A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI >JHM_WU_Dns2_M_AFO11511_1_1947_08_14_USA_Unknown_Murine_coronavirus MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTVLLRI >MHV_2_NA_AAF19388_1_NA_NA_Unknown_Murine_coronavirus MTSTTQAPQPVYQWTADEAIRFLKEWNFSLGIILLFVTIILQFGYTSRSM FVYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGMDTALLRI >MHV_1_NA_ACN89740_1_NA_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI >MHV_3_NA_ACN89749_1_NA_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYLWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI >MHV_BHKR_lab_USA_icA59_L94P_2012_M_AGT17742_1_2012_10_25_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRT >MHV_A59_M_NP_045301_1_NA_NA_Unknown_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI >MHV_BHKR_lab_USA_icA59_17Cl1_2012_M_AGT17731_1_2012_10_25_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRT >MHV_JHM_IA_NA_ACN89768_1_NA_USA_Mouse_Murine_coronavirus MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI >MHV_MI_M_BAJ04700_1_1994_Australia_Mouse_Murine_coronavirus MSSTTPAPQPVYQWTADEAVRFLKEWNFSLGIILLFVTIILQFGYTSRSM FIYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AIYVKSKVGNYRLPSNKPSGSDTALLRI >MHV_BHKR_lab_USA_icA59_ns2M_2012_M_AGT17753_1_2012_10_25_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRT >MHV_S_3239_17_NA_AFD97611_1_NA_NA_Unknown_Murine_coronavirus MSSTTPAPQPIYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI >ML_10_ORF6_AAF69348_1_NA_NA_Unknown_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRT >ML_11_orf6_AAF68927_1_NA_NA_Unknown_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI >Parker_M_YP_003029851_1_NA_NA_Rat_Murine_coronavirus MSSTTSAPQTVYQWTADVAVRFLKEWNFLLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDVKGTVYVRPIIEDYHTLTATN VRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI >Penn_97_1_ORF6_AAF69337_1_NA_NA_Unknown_Murine_coronavirus MNSTTQAPQPVYQWTADEAIRFLKEWNFSLGIILLFVTIILQFGYTSRSM FVYVVKMILLWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGMDTALLRI >RA59_R13_NA_ACN89692_1_2006_01_01_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRT >RJHM_A_NA_ACN89700_1_NA_USA_Mouse_Murine_coronavirus MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI >RA59_SJHM_NA_ACN89707_1_NA_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRT >SA59_RJHM_NA_ACN89725_1_NA_USA_Mouse_Murine_coronavirus MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI >UNKNOWN_AC_000192_M_YP_209237_1_NA_NA_Unknown_Murine_coronavirus MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHFYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTVLLRI >S_M_ADI59792_1_NA_USA_Mouse_Murine_coronavirus MSSTTPAPQPIYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI >repJHM_RA59_NA_ACN89781_1_NA_USA_Mouse_Murine_coronavirus MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRT >repA59_RJHM_NA_ACN89721_1_NA_USA_Mouse_Murine_coronavirus MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSM FIYVVKMIILWLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIM YFVNSIRLFIRTGSWWSFNPETNNLMCIDMKGTVYVRPIIEDYHTLTATI IRGHLYMQGVKLGTGFSLSDLPAYVTVAKVSHLCTYKRAFLDKVDGVSGF AVYVKSKVGNYRLPSNKPSGADTALLRI
Reading sequence file /data//pss_subsets/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/fasta/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1
Found 26 sequences of length 684
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 3.5%
Found 79 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 9
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 60 polymorphic sites
**p-Value(s)**
----------
NSS: 8.30e-02 (1000 permutations)
Max Chi^2: 2.10e-02 (1000 permutations)
PHI (Permutation): 2.00e-03 (1000 permutations)
PHI (Normal): 6.10e-04
#NEXUS
[ID: 8584231841]
begin taxa;
dimensions ntax=26;
taxlabels
681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus
MHV_BHKR_lab_USA_icA59_17Cl1_2012_M_AGT17731_1_2012_10_25_USA_Mouse_Murine_coronavirus
MHV_JHM_IA_NA_ACN89768_1_NA_USA_Mouse_Murine_coronavirus
MHV_MI_M_BAJ04700_1_1994_Australia_Mouse_Murine_coronavirus
MHV_BHKR_lab_USA_icA59_ns2M_2012_M_AGT17753_1_2012_10_25_USA_Mouse_Murine_coronavirus
MHV_S_3239_17_NA_AFD97611_1_NA_NA_Unknown_Murine_coronavirus
ML_10_ORF6_AAF69348_1_NA_NA_Unknown_Murine_coronavirus
ML_11_orf6_AAF68927_1_NA_NA_Unknown_Murine_coronavirus
Parker_M_YP_003029851_1_NA_NA_Rat_Murine_coronavirus
Penn_97_1_ORF6_AAF69337_1_NA_NA_Unknown_Murine_coronavirus
RA59_R13_NA_ACN89692_1_2006_01_01_USA_Mouse_Murine_coronavirus
JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus
RJHM_A_NA_ACN89700_1_NA_USA_Mouse_Murine_coronavirus
RA59_SJHM_NA_ACN89707_1_NA_USA_Mouse_Murine_coronavirus
SA59_RJHM_NA_ACN89725_1_NA_USA_Mouse_Murine_coronavirus
UNKNOWN_AC_000192_M_YP_209237_1_NA_NA_Unknown_Murine_coronavirus
S_M_ADI59792_1_NA_USA_Mouse_Murine_coronavirus
repJHM_RA59_NA_ACN89781_1_NA_USA_Mouse_Murine_coronavirus
repA59_RJHM_NA_ACN89721_1_NA_USA_Mouse_Murine_coronavirus
A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus
JHM_WU_Dns2_M_AFO11511_1_1947_08_14_USA_Unknown_Murine_coronavirus
MHV_2_NA_AAF19388_1_NA_NA_Unknown_Murine_coronavirus
MHV_1_NA_ACN89740_1_NA_USA_Mouse_Murine_coronavirus
MHV_3_NA_ACN89749_1_NA_USA_Mouse_Murine_coronavirus
MHV_BHKR_lab_USA_icA59_L94P_2012_M_AGT17742_1_2012_10_25_USA_Mouse_Murine_coronavirus
MHV_A59_M_NP_045301_1_NA_NA_Unknown_Murine_coronavirus
;
end;
begin trees;
translate
1 681_NA_AFG25754_1_NA_NA_Rat_Murine_coronavirus,
2 MHV_BHKR_lab_USA_icA59_17Cl1_2012_M_AGT17731_1_2012_10_25_USA_Mouse_Murine_coronavirus,
3 MHV_JHM_IA_NA_ACN89768_1_NA_USA_Mouse_Murine_coronavirus,
4 MHV_MI_M_BAJ04700_1_1994_Australia_Mouse_Murine_coronavirus,
5 MHV_BHKR_lab_USA_icA59_ns2M_2012_M_AGT17753_1_2012_10_25_USA_Mouse_Murine_coronavirus,
6 MHV_S_3239_17_NA_AFD97611_1_NA_NA_Unknown_Murine_coronavirus,
7 ML_10_ORF6_AAF69348_1_NA_NA_Unknown_Murine_coronavirus,
8 ML_11_orf6_AAF68927_1_NA_NA_Unknown_Murine_coronavirus,
9 Parker_M_YP_003029851_1_NA_NA_Rat_Murine_coronavirus,
10 Penn_97_1_ORF6_AAF69337_1_NA_NA_Unknown_Murine_coronavirus,
11 RA59_R13_NA_ACN89692_1_2006_01_01_USA_Mouse_Murine_coronavirus,
12 JHM_WU_M_AFO11521_1_1947_08_14_USA_Unknown_Murine_coronavirus,
13 RJHM_A_NA_ACN89700_1_NA_USA_Mouse_Murine_coronavirus,
14 RA59_SJHM_NA_ACN89707_1_NA_USA_Mouse_Murine_coronavirus,
15 SA59_RJHM_NA_ACN89725_1_NA_USA_Mouse_Murine_coronavirus,
16 UNKNOWN_AC_000192_M_YP_209237_1_NA_NA_Unknown_Murine_coronavirus,
17 S_M_ADI59792_1_NA_USA_Mouse_Murine_coronavirus,
18 repJHM_RA59_NA_ACN89781_1_NA_USA_Mouse_Murine_coronavirus,
19 repA59_RJHM_NA_ACN89721_1_NA_USA_Mouse_Murine_coronavirus,
20 A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus,
21 JHM_WU_Dns2_M_AFO11511_1_1947_08_14_USA_Unknown_Murine_coronavirus,
22 MHV_2_NA_AAF19388_1_NA_NA_Unknown_Murine_coronavirus,
23 MHV_1_NA_ACN89740_1_NA_USA_Mouse_Murine_coronavirus,
24 MHV_3_NA_ACN89749_1_NA_USA_Mouse_Murine_coronavirus,
25 MHV_BHKR_lab_USA_icA59_L94P_2012_M_AGT17742_1_2012_10_25_USA_Mouse_Murine_coronavirus,
26 MHV_A59_M_NP_045301_1_NA_NA_Unknown_Murine_coronavirus
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:6.776673e-03,9:3.354751e-03,((((((2:9.328769e-04,5:9.671375e-04,7:9.520254e-04,11:8.713967e-04,14:8.708822e-04,18:9.022902e-04,25:9.054983e-04)0.810:2.179715e-03,8:9.615383e-04,20:9.822463e-04,26:9.222048e-04)0.999:8.404020e-03,(((3:9.222438e-04,(12:2.177810e-03,16:9.410765e-04,21:9.330996e-04)0.998:3.687805e-03)0.527:2.064405e-03,(13:8.694727e-04,15:9.343386e-04,19:9.233543e-04)0.830:3.192251e-03)1.000:1.637892e-02,23:2.800370e-03)0.647:4.664342e-03)0.713:9.238101e-03,24:2.016945e-02)0.992:1.118648e-02,(6:9.403454e-04,17:9.098115e-04)1.000:1.613089e-02)0.792:6.092047e-03,(4:2.583769e-02,(10:1.202936e-03,22:1.941077e-03)1.000:2.792889e-02)1.000:2.767955e-02)1.000:2.445583e-02);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:6.776673e-03,9:3.354751e-03,((((((2:9.328769e-04,5:9.671375e-04,7:9.520254e-04,11:8.713967e-04,14:8.708822e-04,18:9.022902e-04,25:9.054983e-04):2.179715e-03,8:9.615383e-04,20:9.822463e-04,26:9.222048e-04):8.404020e-03,(((3:9.222438e-04,(12:2.177810e-03,16:9.410765e-04,21:9.330996e-04):3.687805e-03):2.064405e-03,(13:8.694727e-04,15:9.343386e-04,19:9.233543e-04):3.192251e-03):1.637892e-02,23:2.800370e-03):4.664342e-03):9.238101e-03,24:2.016945e-02):1.118648e-02,(6:9.403454e-04,17:9.098115e-04):1.613089e-02):6.092047e-03,(4:2.583769e-02,(10:1.202936e-03,22:1.941077e-03):2.792889e-02):2.767955e-02):2.445583e-02);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1723.41 -1751.44
2 -1725.09 -1762.03
--------------------------------------
TOTAL -1723.93 -1761.34
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.278454 0.002150 0.197059 0.370077 0.273399 1140.57 1147.04 1.000
r(A<->C){all} 0.092996 0.000925 0.036376 0.152773 0.090474 703.65 758.17 1.000
r(A<->G){all} 0.174909 0.001606 0.100721 0.253460 0.172737 511.71 559.53 1.001
r(A<->T){all} 0.115196 0.000792 0.063508 0.169976 0.112912 583.77 660.81 1.000
r(C<->G){all} 0.049873 0.000589 0.009831 0.097470 0.046484 756.34 811.66 1.000
r(C<->T){all} 0.491558 0.003065 0.388644 0.601727 0.491349 576.73 661.67 1.000
r(G<->T){all} 0.075469 0.000570 0.031498 0.121974 0.073378 1003.61 1009.11 1.001
pi(A){all} 0.251780 0.000252 0.219644 0.282200 0.251250 1074.50 1088.92 1.000
pi(C){all} 0.197140 0.000200 0.170667 0.224480 0.196575 1054.29 1073.91 1.000
pi(G){all} 0.220141 0.000225 0.190812 0.249680 0.219958 1022.58 1072.94 1.001
pi(T){all} 0.330939 0.000293 0.296875 0.363192 0.330799 1040.25 1082.97 1.000
alpha{1,2} 0.423856 0.100276 0.092590 1.024055 0.337611 894.25 1041.18 1.000
alpha{3} 1.641628 0.996135 0.253113 3.712646 1.417858 859.44 901.26 1.000
pinvar{all} 0.621447 0.008037 0.446644 0.763536 0.636635 332.39 531.73 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\ ***************** TYPES OF STANDARD ANALYSES ***************** (1) Selection Analyses (2) Evolutionary Hypothesis Testing (3) Relative evolutionary rate inference (4) Coevolutionary analysis (5) Basic Analyses (6) Codon Selection Analyses (7) Compartmentalization (8) Data File Tools (9) Miscellaneous (10) Model Comparison (11) Kernel Analysis Tools (12) Molecular Clock (13) Phylogeny Reconstruction (14) Positive Selection (15) Recombination (16) Selection/Recombination (17) Relative Rate (18) Relative Ratio (19) Substitution Rates Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' ***************** (1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution). (2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood). (3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting). (4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection). (5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification). (6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood). (7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation). Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types): Analysis Description -------------------- Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a coding sequence alignment to determine whether some sites have been subject to pervasive purifying or diversifying selection. v2.1 introduces two more methods for estimating the posterior distribution of grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation Bayes approximation (fastest). Please note that a FUBAR analysis generates a cache and a results JSON file in the same directory as directory as the original alignment. HyPhy needs to have write privileges to this directory. For example if the original file is in /home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there will also exist FUBAR-generated files /home/sergei/FUBAR/data/pol.nex.FUBAR.json, /home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide checkpointing so that a partially completed analysis can be restarted. - __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree (one per partition) - __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring selection (2013), Mol Biol Evol. 30(5):1196-205 - __Written by__: Sergei L Kosakovsky Pond - __Contact Information__: spond@temple.edu - __Analysis Version__: 2.1 ####Choose Genetic Code 1. [**Universal**] Universal code. (Genebank transl_table=1). 2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2). 3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3). 4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4). 5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5). 6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6). 7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9). 8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10). 9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12). 10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13). 11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14). 12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15). 13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16). 14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21). 15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22). 16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23). 17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24). 18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25). 19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26). >Please choose an option (or press q to cancel selection): >Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`) >A tree was found in the data file: `(C1,C17,((((((C10,C13,C15,C19,C21,C25,C8),C16,C3,C9),(((C11,(C2,C23,C4)),(C20,C22,C26)),C6)),C7),(C14,C24)),(C12,(C18,C5))))` >Would you like to use it (y/n)? >Loaded a multiple sequence alignment with **26** sequences, **228** codons, and **1** partitions from `/data//pss_subsets/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/results/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1.fna` > FUBAR will write cache and result files to _/data//pss_subsets/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/results/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result/original_alignment/fubar/results/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1/A59_NA_ATN37891_1_2014_01_16_USA_Mouse_Murine_coronavirus.result.1.fna.FUBAR.json_, respectively > Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer): ####Posterior estimation method 1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation) 2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed) 3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default) >Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5): ### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model * Log(L) = -1745.44, AIC-c = 3587.14 (48 estimated parameters) * Tree length (expected substitutions/site) for partition 1 : 0.203 ### Computing the phylogenetic likelihood function on the grid * Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid * Best scaling achieved for * synonymous rate = 2.815 * non-synonymous rate = 0.357 * Computing conditional site likelihoods on a 20 x 20 rate grid ### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights * Using the following settings * Dirichlet alpha : 0.5 ### Tabulating site-level results ---- ## FUBAR inferred no sites under subject to positive selection at posterior probability >= 0.9
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
