--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -10099.67 -10119.81
2 -10100.19 -10122.33
--------------------------------------
TOTAL -10099.90 -10121.72
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 8.712615 0.443487 7.429567 9.971106 8.666142 915.88 944.14 1.001
r(A<->C){all} 0.171104 0.000167 0.147341 0.196500 0.170936 657.74 786.85 1.000
r(A<->G){all} 0.238035 0.000227 0.209421 0.268090 0.237725 753.04 808.25 1.002
r(A<->T){all} 0.121690 0.000120 0.101374 0.143463 0.121390 750.78 866.16 1.000
r(C<->G){all} 0.086293 0.000111 0.065996 0.106374 0.085743 913.95 925.77 1.000
r(C<->T){all} 0.306111 0.000300 0.272822 0.340617 0.305777 695.49 752.91 1.002
r(G<->T){all} 0.076767 0.000092 0.058932 0.095508 0.076489 1030.79 1045.69 1.000
pi(A){all} 0.288423 0.000066 0.272913 0.305252 0.288331 761.88 787.10 1.002
pi(C){all} 0.242808 0.000059 0.228529 0.258006 0.242826 878.44 901.95 1.000
pi(G){all} 0.226230 0.000071 0.209656 0.241788 0.226209 603.04 687.17 1.000
pi(T){all} 0.242539 0.000067 0.227203 0.258865 0.242487 794.06 846.52 1.002
alpha{1,2} 0.648669 0.003697 0.535503 0.772369 0.645780 1043.15 1150.48 1.000
alpha{3} 6.863887 2.934357 3.952215 10.399960 6.642874 1364.80 1432.90 1.000
pinvar{all} 0.012587 0.000070 0.000033 0.028559 0.011293 1125.60 1215.38 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
-- Starting log on Thu Oct 27 00:03:59 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.08 sec, SCORE=999, Nseq=19, Len=549
C1 -MSDNGTQNQRSASR-ITFGGPSDSTDNNQDGGRSGARPKQR--------
C2 MSDNGPQPSQRSAPR-ITFGGPTDSIDNNQNGGRNGARPKQR--------
C3 -------------MSSVKFE-------------ASGRTGRTP--------
C4 MSDNGPQPSQRSAPR-ITFGGPTDSIDNNQNGGRNGARPKQR--------
C5 -------------MSSVKFE-------------ASGRTGRTP--------
C6 MSGRNKPRSGTSTPK-VTFKQESDGSD-SESERRASIRPKNK-------G
C7 -------------MASVSFE------------QQRGRSGRVP--------
C8 -------------MASVSFD-----------DQPRGRGGRMP--------
C9 -------------MASVSFD-----------DQSRGRSGRVP--------
C10 -------------MASVSFD-----------DQSRGRSGRVP--------
C11 MSGRNRSRPGTPSPK-VTFKQESDGSD-SESDRRNGNRTGARSKNNNGRS
C12 MSGRRTPR---NQPQ-VSFKNESD-SD-SESGARSQSRGRNSNNNNNGGN
C13 MSGRRTPR---NQPQ-VSFKNESD-SD-SESGARSQSRGRNSNNNNNGGN
C14 MSGRRTPR---NQPQ-VSFKNESD-SD-SESGQRSQSRGRNPNNNNNGGN
C15 -------MATPAAPRTISFA---DNND-NQTNQQQRGRGRNP--------
C16 -MSDNGTQNQRSASR-ITFGGPSDSTDNNQDGGRSGARPKQR--------
C17 -MSDNGPQNQRSAPR-ITFGGPSDSTDNNQDGGRSGVRPKQR--------
C18 -------MATPAAPRAVSFA---DNND-NSNNNQSRGRGRNP--------
C19 -------MATPAAPRAVTFG---DNNDNNTNTQQSRGRGRTP--------
:.*
C1 ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG
C2 ----------RPQGLPNNTASWFTALTQHGKEEL-RFSRGQGVPINTNSG
C3 -------------------LSYFAPITVTSGKNLWNVLPKNAVPSGKG-K
C4 ----------RPQGLPNNTASWFTALTQHGKEEL-RFSRGQGVPINTNSG
C5 -------------------LSYFAPITVTSGKNLWNVLPKNAVPSGKG-K
C6 ----SSFKPEKPKAAPPQNVSWFAPLVQTGKNDL-RFPRGQGVPISQGVD
C7 -------------------LSFFYPVIVTDNTPFWKVMPNNAVPNGMG-T
C8 -------------------LSYYYPIMVTDGKPLFKVLQSNAVPTGKG-T
C9 -------------------LSFYNPVMVTDDKPLFKVMPHNAVPTGKG-N
C10 -------------------LSFYNPVMVTDDKPLFKVMPHNAVPTGKG-N
C11 ----SAPRPEKPKAAPLQNVSWFAPLVQTGKSEL-RFARGEGVPVSQGVD
C12 GGARRKDKPEKPRAAPAQNVSWFLPIVQTGKQDL-RFARGEGVPVSQGVD
C13 GGARRKDKPEKPRAAPAQNVSWFLPIVQTGKQDL-RFARGEGVPVSQGVD
C14 GGARRKDKPEKPRAAPQQNVSWFLPLVQTGKNDL-RFPRGQGVPITQGVD
C15 ----------KPRPAPNNTVSWYTGLTQHGKNPL-AFPPGQGVPLNANST
C16 ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG
C17 ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG
C18 ----------KPRPAPNNTVSWYTGLTQHGKVSL-SFPPGQGVPLNANST
C19 ----------KPRPAPNNTVSWYTGLTQHGKVPL-SFPPGQGVPLNANST
*:: : . : . :.** .
C1 RDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C2 PDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C3 ANQQVGYWSEQTR-WKMQKGERVEKPSFWHFYFLGTGPHADAKFRERIQG
C4 PDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C5 ANQQVGYWSEQTR-WKMQKGERVEKPSFWHFYFLGTGPHADAKFRERIQG
C6 PVYNHGYWLRTQRSFQKG-GKLVQANPRWYFYYTGTGRYGDMRYGTKNPD
C7 KDERIGYWNEQKR-WRMRKGQRIDLPSKWHFYFLGTGPHKEASFRQRLDG
C8 KEQQIGYWNMQAR-WRMVKGVRKDLDPKWHFYYLGTGPHADAPFRQRLEG
C9 KSQQIGYWNMQPR-WRMVKGQRKDLTPKWHFYYLGTGPHAEAPFRQKLDG
C10 KSQQIGYWNMQPR-WRMVKGQRKDLTPKWHFYYLGTGPHAEAPFRQKLDG
C11 PTYEHGYWLRTQRSFQKG-GKQVLANPRWYFYYTGTGRFGDLRFGTKNPD
C12 ITYQHGYWLRRQRTFNKG-GKQVQANPRWFFYYTGTGPYEGLRYGSRNND
C13 ITYQHGYWLRRQRTFNKG-GKQVQANPRWFFYYTGTGPYEGLRYGSRNND
C14 PTFQHGYWLFRQRSFQKG-GKQVMANPRWYFYYTGTGPYEGLRYGSKSND
C15 TAQNAGYWRRQDRKINTGNGVK-QLSPRWFFYYTGTGPEANLPFRSVKDG
C16 TDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C17 RDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C18 PAQNAGYWRRQDRKINTGNGTK-SLAPRWYFYYTGTGPEANLPFRAVKDG
C19 PAQNAGYWRRQDRKINTGNGTK-QLAPRWFFYYTGTGPEANLPFRAVKDG
. **: * . * . *.**: *** : .
C1 IVWVAIEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG
C2 IVWVATEGALNTPKDHIGTRNPNNNAATV---LQLPQGTTLP-KGFYAEG
C3 VVWVSKANADLKP-TDLGTRSKARSLIIPKFDIELPDDIEIV-DKSSAPN
C4 IVWVATEGALNTPKDHIGTRNPNNNAATV---LQLPQGTTLP-KGFYAEG
C5 VVWVSKANADLKP-TDLGTRSKARSLITPKFDIELPDDIEIV-DKSSAPN
C6 LIWVGEEGANVNRVGDMGTRNPNNDGAIS---VQLHDG--IP-KGFYAEG
C7 VYWVAVNGAKTQP-TSLGSRKKSAAMMVPQFSVSLPSNIQVQTENASAPA
C8 VFWVAVQGSKTEP-TGLGVRKRNAPLLKPQFSFKLPVNVEIQEDSASRPN
C9 VFWVAVQGSDTQP-TGLGVRKRNQPLIKPQFAVKLPANIEIQEENASKPN
C10 VFWVAVQGSDTQP-TGLGVRKRNQPLIKPQFAVKLPANIEIQEENASKPN
C11 IVWVGQEGANINRLGDMGTRNPSNDSAIP---VQLTGG--IP-KGFYAEG
C12 IIWVGNEGANVNRLGDMGTRNPANDAGIP---VQLAEG--IP-KGFYAEG
C13 IIWVGNEGANVNRLGDMGTRNPANDAGIP---VQLAEG--IP-KGFYAEG
C14 LIWVGNEGANVNRIGDMGTRNPANDAGLV---VQLADG--IP-KGFYAEG
C15 IVWVYEEGATDAP-SVFGTRNPANDAAIV---CQFAPGTLIP-KNFHIEG
C16 IVWVATEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG
C17 IVWVATEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG
C18 IIWVHEDGATDAP-STFGTRNPNNDAAIV---TQFAPGTKLP-KNFHIEG
C19 IVWVHEEGATDAP-STFGTRNPNNDAAIV---TQFAPGTKLP-KNFHIEG
: ** .: :* *. .: . : .
C1 SRSGSQASSR-----SSSRSRGNSRTSTPG--------------------
C2 SRGGSQASSR-----SSSRSRGNSRNSTPG--------------------
C3 SRGNSRSQSRGAKSGSKSRGNSQTRDNSKS-RDNSNNRGKSQSRNNSRSR
C4 SRGGSQASSR-----SSSRSRGNSRNSTPG--------------------
C5 SRGNSRSQSRGAKSGSKSRGNSQTRDNSKS-RDNSNNRGKSQSRNNSRSR
C6 RNSRSNSRNS-----SRNSSRASSQGNSRA--------------------
C7 SRNQSQNR-------SQSANRSQSRGPNQNVNQNQ----------NTNGN
C8 SRNPSSNRDR-----SQSGNRSASSGPKQGNSQNQ---NNSSQGNNSNNQ
C9 SRNPSTNRDR-----SQSGNRSASRGPQQGNTQNQNQNNNSSKGNQNNNQ
C10 SRNPSTNRDR-----SQSGNRSASRGPQQGNTQNQNQNNNSSKGNQNNNQ
C11 RGSRGNSRSS-----SRNSSRASSRGNSRA--------------------
C12 RNSRGNSRNS-----SRSSSRGSSNANSRN--------------------
C13 RNSRGNSRNS-----SRSSSRGSSNANSRN--------------------
C14 RNSRGNSRNS-----SRSSSRGSSNANSRN--------------------
C15 TGGNSQSSSR-----ASSNSRNSSRSNSRG----------------GRST
C16 SRSGSQASSR-----SSSRSRGNSRTSTPG--------------------
C17 SRNGSQASSR-----SSSRSRGNSRTSTPG--------------------
C18 TGGNSQSSSR-----ASSASRNSSRSNSRG----------------SRSG
C19 TGGNSQSSSR-----ASSASRGSSRSSSRG----------------ARSG
. . : . .. :
C1 -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG
C2 -SSRGNSPARMASGGGE----TALALLLLDRLNQL---------ESKVSG
C3 GQQRNNNQQRQGSGNAGNNT-ADLAAAIVLALEKAGLARDT---EKAPKK
C4 -SSRGNSPARMAIGGGE----TALALLLLDRLNQL---------ESKVSG
C5 GQQRNNNQQRQGSGNAGNNT-ADLAAAIVLALEKAGLARDT---EKAPKK
C6 -GSRNASPGRNAPNVASGN--EPWMAYLVQKLEAL---------ENKVNG
C7 QRARSQSRNRGSNNNQPQNQ-VDIVAAVKAALQQLGVGNQNQGGTGKKSK
C8 QRSRNNSKSRGQNNQSNNSQ-ADIVAAVKQALKELGVSPQEK--KNKQKG
C9 QRSRNNSKSRSQNNSQPQNQQVDIVAAVKQALKELGVSPQEK--KQKQKG
C10 QRSRNNSKSRSQNNSQPQNQQVDIVAAVKQALKELGVSPQEK--KQKQKG
C11 -GSRGASPGRPAATPSA----EPWMAYLVQKLEKL---------ESQVNG
C12 -QSRSNSPGRGSAPPSGG---EPWMAYLIQKLENL---------EQRVDG
C13 -QSRSNSPGRGSAPPSGG---EPWMAYLIQKLENL---------EQRVDG
C14 -QSRSNSPGRGSAPPSGS---EPWMAYLIQKLENL---------EQRVDG
C15 SNSRGTSPVSHGVGSAESLAALPLLLDLQKRLADL------------ESG
C16 -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG
C17 -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG
C18 NSSRGTSPGPSGVGAVGG---EMLYLDLLNRLQAL------------ESG
C19 NSSRSASPGPAGIGAVGGDASSILYLSLLKRLEDL------------EAG
*. . : *
C1 KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG
C2 KG--QQQGQTVTKKSAAEASKKPRQ-------KRTATKQYNVTQAFGRRG
C3 ESPNNNKKQKSRASSPAPAQSKNTDQLTKVVWKRVPDPSCNVKQCF---G
C4 KG--QQQGQTVTKKSAAEASKKPRQ-------KRTATKQYNVTQAFGRRG
C5 ESPNNNKKQKSRASSPAPAQSKNTDQLTKVVWKRMPDPSCNVKQCF---G
C6 PKE-TKKPVQVTKNEAAANAKKLRH-------KRTPHKGSGVTTNYGRRG
C7 SNSGVNTPKEQRAKSPAKTPPVQRKQMERPVWKRVPNSSENVTACF---G
C8 STSGNNTPKEQRSKSPAPSPNTQRKQIERPVWKRVPTSAEDVTVCF---G
C9 NTSGNNTPKEQRAKSPARSPSSPRKQLERPVWKRVPTEAENVTQCF---G
C10 NTSGNNTPKEQRAKSPARSPASPRKQLERPVWKRVPTEAENVTQCF---G
C11 TKPVTKNPLQVTKNEAAANAKKLRH-------KRTAHKGSGVTMNYGRRG
C12 KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNATQNYGRRG
C13 KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNATQNYGRRG
C14 KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNVTQNYGRRG
C15 K---SKQPKVVTKKDASAAKNKMRH-------KRVATKNFNVTQAFGLRG
C16 KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG
C17 KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG
C18 KTK-QAQPKVITKKDAVAAKNKMRH-------KRVATKGFNMVQAFGLRG
C19 KS--KSAPKVVTKKDAAAAKNKMRH-------KRVATKSFNMVQAFGRRG
. . . ** . . : *
C1 PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C2 PEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C3 PRSTYQNFGDEDAVEKGVRAKHYPSWAELTPTTAALLFGGEVMTVEDGED
C4 PEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C5 PRSTYQNFGDEEAVEKGVRAKHYPSWAELTPNTAALLFGGEVMTVEDGED
C6 PGDLEGNFGDLNMLKLGTDDSRFPAAAQMAPNVASFLFMSHFSVREENDA
C7 PRDAVHNFGDSDVVHHGTDAKHWPQLAELIPTPAALAFGSEISTTEVGDK
C8 PRDTQQNFGDQDLVRHGVDAKHYPQLAEFVPGTAALLFGGEVSTRESGED
C9 PRDTLRNFGDRELTLRGVEAKNYPQIAEFVPTPAALLFGGEVSTREAGED
C10 PRDTLRNFGDRELTLRGVEAKNYPQIAEFVPTPAALLFGGEVSTREAGED
C11 PGDLEGNFGDLDMLKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTREEGDA
C12 PGNLEGNFGDQEFLKLGTDDPRFPVVAQMAPNTSSFVFMSHFTPRYEADA
C13 PGNLEGNFGDQEFLKLGTDDPRFPVVAQMAPNTSSFVFMSHFTPRYEADA
C14 PGNLEGNFGDQDFLKLGTDDPRFPVVAQMAPNTSSFVFMSQFTPRYESDA
C15 PGPLQGNFGDMNYNKFGTEDPRWPQMAELAPSASAFMSMSQFKLTHQSND
C16 PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C17 PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C18 PGDLQGNFGDLQLNKLGTEDPRWPQIAELAPSASAFIGMSQFKLTHQSND
C19 PGDLQGNFGDLQLNKLGTEDPRWPQIAELAPSASAFMGMSQFKLTHQSND
* **** : *. .:. *:: * ::: ... .
C1 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C2 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C3 I------VIQYTYQMRVPKTTPALQTFL----PQVSAFAN-----SGGDD
C4 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C5 I------VIQYTYQMRVPKTTPALQTFL----PQVSAFAN-----ASGDD
C6 L------WLHYKGAIKLPKDDPNYDQWTKILGENLNAYKNFPPVEPKKDK
C7 V------EITYTYKMKVDKADKNLPAFL----QQVSAYAQ-----P----
C8 V------EITFHYKLKVKKSDKNLPLFL----QQVSAYAL-----P----
C9 V------EITFHYKMKVKKDDKNLPLFL----QQVSAYAL-----P----
C10 V------EITFHYKMKVKKDDKNLPLFL----QQVSAYAL-----P----
C11 M------WLHYKGAIKLPKDDPNYDQWTKILAENLNAYRDFPPPAPKKDK
C12 L------WLDYTGSIKLPRDDPNFPQWEKLLAENIDAYKSFPPPKPKSDK
C13 L------WLDYTGSIKLPRDDPNFPQWEKLLAENIDAYKSFPPPKPKSDK
C14 L------WLDYTGSIKLPRDDPNFPQWEKLLAENLDAYKSFPPPKPKSDK
C15 DKGEPIYFLSYSGAIKLDPKNPNYKKWLELLEANIDAYKTF----PKKER
C16 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C17 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C18 TDGAPVYFLRYSGAIKLDPKNPNYNKWLELIEQNVDAYKTF----PKKEK
C19 ADGSPVYFLRYSGAIKLDPKNPNYQKWMELLEANIDAYKSF----PVKEK
: : ::: ::.*: .
C1 KKKTDEA-------------------------------------------
C2 KKKTDEA-------------------------------------------
C3 ASESGQD------------------------------------MPVVTSA
C4 KKKTDEA-------------------------------------------
C5 ESESGQE------------------------------------MPVVTSA
C6 KKKEEAS--VEVAVYEDAATGTDQPIVQKIWVKDDGVQTDDEWIGGDDTV
C7 --------------------------------------------------
C8 --------------------------------------------------
C9 --------------------------------------------------
C10 --------------------------------------------------
C11 KKKEETT--QETVIFEDASTGTDQP-VVKVWVKDQDAQTDDEWLGGDETV
C12 KKKSDKSDSAAGPSEDLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI
C13 KKKSDKSDSAAGPSEDLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI
C14 KKKSDKSDSATGPSADLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI
C15 KPKTTED---------------------------------GASASSSASQ
C16 KKKTDEA-------------------------------------------
C17 KKKTDEA-------------------------------------------
C18 KQKAPKE-------------------------------------------
C19 KQKADDN-----------------------------KQDSTEDSGDLFAE
C1 ----QPLPQR-KKLPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C2 ----QPLPQRQKKQPIVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C3 AESAAPAPASTPKLNPRAETFVPPKVDPNYFAGMKVEIMNKTISDDSTV
C4 ----QPLPQRQKKQPIVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C5 AESAAPAPAPTPKLNPKAETFVPPKVDPNYFAGMKVEIMNKTISDDSTV
C6 YEEEDDKPKAQRRHKKRASTASR--VT----------VADPTNLANERS
C7 ----SQANQISSQLNPVAPVFTPGMDD-------SVEIIDQVFDTDV--
C8 ----SQAPNIPSQLNPIAPDFTPGFEM----VNETVEIIDQVYDTPDA-
C9 ----SQAPNVPSQLNPVAPDFTPSGVE---MVNETVEIIDQVYDSFDA-
C10 ----SQAPNVPSQLNPVAPDFTPSGVE---MVNETVEIIDQVYDSFDA-
C11 YEEEDDRPKTQRRHKKRGSTASR--VT----------IADPTNAGAERS
C12 YEDENDKPKAQRRQSIKKRNATHQRHV----------SIDGAAQSSA--
C13 YEDENDKPKAQRRQSIKKRNATHQRHV----------SIDGAAQSSA--
C14 YEDENDKPKAQRRQSIKKRNAQRHV------------SIDGSAQSSA--
C15 MEDVDAKPQRKPKSRVAGSITMRSGSS--------PALQDVNFDSEA--
C16 ----QPLPQR-KKQPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C17 ----QPLPQRQKKQPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C18 EPSDQMNVQPPKEQRVQGSITQRSRTP-------RPSVQPGPMTDVNTD
C19 VVASAMASQSQPQRAPKGSITQRSRAP-----RAPVSQMEDVNQTDDRQ
.
-- Starting log on Thu Oct 27 00:04:24 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.73 sec, SCORE=754, Nseq=19, Len=549
C1 -MSDNGTQNQRSASR-ITFGGPSDSTDNNQDGGRSGARPKQR--------
C2 MSDNGPQPSQRSAPR-ITFGGPTDSIDNNQNGGRNGARPKQR--------
C3 -------------MSSVKFE-------------ASGRTGRTP--------
C4 MSDNGPQPSQRSAPR-ITFGGPTDSIDNNQNGGRNGARPKQR--------
C5 -------------MSSVKFE-------------ASGRTGRTP--------
C6 MSGRNKPRSGTSTPK-VTFKQESDGSD-SESERRASIRPKNK-------G
C7 -------------MASVSFE------------QQRGRSGRVP--------
C8 -------------MASVSFD-----------DQPRGRGGRMP--------
C9 -------------MASVSFD-----------DQSRGRSGRVP--------
C10 -------------MASVSFD-----------DQSRGRSGRVP--------
C11 MSGRNRSRPGTPSPK-VTFKQESDGSD-SESDRRNGNRTGARSKNNNGRS
C12 MSGRRTPR---NQPQ-VSFKNESD-SD-SESGARSQSRGRNSNNNNNGGN
C13 MSGRRTPR---NQPQ-VSFKNESD-SD-SESGARSQSRGRNSNNNNNGGN
C14 MSGRRTPR---NQPQ-VSFKNESD-SD-SESGQRSQSRGRNPNNNNNGGN
C15 -------MATPAAPRTISFA---DNND-NQTNQQQRGRGRNP--------
C16 -MSDNGTQNQRSASR-ITFGGPSDSTDNNQDGGRSGARPKQR--------
C17 -MSDNGPQNQRSAPR-ITFGGPSDSTDNNQDGGRSGVRPKQR--------
C18 -------MATPAAPRAVSFA---DNND-NSNNNQSRGRGRNP--------
C19 -------MATPAAPRAVTFG---DNNDNNTNTQQSRGRGRTP--------
:.*
C1 ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG
C2 ----------RPQGLPNNTASWFTALTQHGKEEL-RFSRGQGVPINTNSG
C3 -------------------LSYFAPITVTSGKNLWNVLPKNAVPSGKG-K
C4 ----------RPQGLPNNTASWFTALTQHGKEEL-RFSRGQGVPINTNSG
C5 -------------------LSYFAPITVTSGKNLWNVLPKNAVPSGKG-K
C6 ----SSFKPEKPKAAPPQNVSWFAPLVQTGKNDL-RFPRGQGVPISQGVD
C7 -------------------LSFFYPVIVTDNTPFWKVMPNNAVPNGMG-T
C8 -------------------LSYYYPIMVTDGKPLFKVLQSNAVPTGKG-T
C9 -------------------LSFYNPVMVTDDKPLFKVMPHNAVPTGKG-N
C10 -------------------LSFYNPVMVTDDKPLFKVMPHNAVPTGKG-N
C11 ----SAPRPEKPKAAPLQNVSWFAPLVQTGKSEL-RFARGEGVPVSQGVD
C12 GGARRKDKPEKPRAAPAQNVSWFLPIVQTGKQDL-RFARGEGVPVSQGVD
C13 GGARRKDKPEKPRAAPAQNVSWFLPIVQTGKQDL-RFARGEGVPVSQGVD
C14 GGARRKDKPEKPRAAPQQNVSWFLPLVQTGKNDL-RFPRGQGVPITQGVD
C15 ----------KPRPAPNNTVSWYTGLTQHGKNPL-AFPPGQGVPLNANST
C16 ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG
C17 ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG
C18 ----------KPRPAPNNTVSWYTGLTQHGKVSL-SFPPGQGVPLNANST
C19 ----------KPRPAPNNTVSWYTGLTQHGKVPL-SFPPGQGVPLNANST
*:: : . : . :.** .
C1 RDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C2 PDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C3 ANQQVGYWSEQTR-WKMQKGERVEKPSFWHFYFLGTGPHADAKFRERIQG
C4 PDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C5 ANQQVGYWSEQTR-WKMQKGERVEKPSFWHFYFLGTGPHADAKFRERIQG
C6 PVYNHGYWLRTQRSFQKG-GKLVQANPRWYFYYTGTGRYGDMRYGTKNPD
C7 KDERIGYWNEQKR-WRMRKGQRIDLPSKWHFYFLGTGPHKEASFRQRLDG
C8 KEQQIGYWNMQAR-WRMVKGVRKDLDPKWHFYYLGTGPHADAPFRQRLEG
C9 KSQQIGYWNMQPR-WRMVKGQRKDLTPKWHFYYLGTGPHAEAPFRQKLDG
C10 KSQQIGYWNMQPR-WRMVKGQRKDLTPKWHFYYLGTGPHAEAPFRQKLDG
C11 PTYEHGYWLRTQRSFQKG-GKQVLANPRWYFYYTGTGRFGDLRFGTKNPD
C12 ITYQHGYWLRRQRTFNKG-GKQVQANPRWFFYYTGTGPYEGLRYGSRNND
C13 ITYQHGYWLRRQRTFNKG-GKQVQANPRWFFYYTGTGPYEGLRYGSRNND
C14 PTFQHGYWLFRQRSFQKG-GKQVMANPRWYFYYTGTGPYEGLRYGSKSND
C15 TAQNAGYWRRQDRKINTGNGVK-QLSPRWFFYYTGTGPEANLPFRSVKDG
C16 TDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C17 RDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C18 PAQNAGYWRRQDRKINTGNGTK-SLAPRWYFYYTGTGPEANLPFRAVKDG
C19 PAQNAGYWRRQDRKINTGNGTK-QLAPRWFFYYTGTGPEANLPFRAVKDG
. **: * . * . *.**: *** : .
C1 IVWVAIEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG
C2 IVWVATEGALNTPKDHIGTRNPNNNAATV---LQLPQGTTLP-KGFYAEG
C3 VVWVSKANADLKP-TDLGTRSKARSLIIPKFDIELPDDIEIV-DKSSAPN
C4 IVWVATEGALNTPKDHIGTRNPNNNAATV---LQLPQGTTLP-KGFYAEG
C5 VVWVSKANADLKP-TDLGTRSKARSLITPKFDIELPDDIEIV-DKSSAPN
C6 LIWVGEEGANVNRVGDMGTRNPNNDGAIS---VQLHDG--IP-KGFYAEG
C7 VYWVAVNGAKTQP-TSLGSRKKSAAMMVPQFSVSLPSNIQVQTENASAPA
C8 VFWVAVQGSKTEP-TGLGVRKRNAPLLKPQFSFKLPVNVEIQEDSASRPN
C9 VFWVAVQGSDTQP-TGLGVRKRNQPLIKPQFAVKLPANIEIQEENASKPN
C10 VFWVAVQGSDTQP-TGLGVRKRNQPLIKPQFAVKLPANIEIQEENASKPN
C11 IVWVGQEGANINRLGDMGTRNPSNDSAIP---VQLTGG--IP-KGFYAEG
C12 IIWVGNEGANVNRLGDMGTRNPANDAGIP---VQLAEG--IP-KGFYAEG
C13 IIWVGNEGANVNRLGDMGTRNPANDAGIP---VQLAEG--IP-KGFYAEG
C14 LIWVGNEGANVNRIGDMGTRNPANDAGLV---VQLADG--IP-KGFYAEG
C15 IVWVYEEGATDAP-SVFGTRNPANDAAIV---CQFAPGTLIP-KNFHIEG
C16 IVWVATEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG
C17 IVWVATEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG
C18 IIWVHEDGATDAP-STFGTRNPNNDAAIV---TQFAPGTKLP-KNFHIEG
C19 IVWVHEEGATDAP-STFGTRNPNNDAAIV---TQFAPGTKLP-KNFHIEG
: ** .: :* *. .: . : .
C1 SRSGSQASSR-----SSSRSRGNSRTSTPG--------------------
C2 SRGGSQASSR-----SSSRSRGNSRNSTPG--------------------
C3 SRGNSRSQSRGAKSGSKSRGNSQTRDNSKS-RDNSNNRGKSQSRNNSRSR
C4 SRGGSQASSR-----SSSRSRGNSRNSTPG--------------------
C5 SRGNSRSQSRGAKSGSKSRGNSQTRDNSKS-RDNSNNRGKSQSRNNSRSR
C6 RNSRSNSRNS-----SRNSSRASSQGNSRA--------------------
C7 SRNQSQNR-------SQSANRSQSRGPNQNVNQNQ----------NTNGN
C8 SRNPSSNRDR-----SQSGNRSASSGPKQGNSQNQ---NNSSQGNNSNNQ
C9 SRNPSTNRDR-----SQSGNRSASRGPQQGNTQNQNQNNNSSKGNQNNNQ
C10 SRNPSTNRDR-----SQSGNRSASRGPQQGNTQNQNQNNNSSKGNQNNNQ
C11 RGSRGNSRSS-----SRNSSRASSRGNSRA--------------------
C12 RNSRGNSRNS-----SRSSSRGSSNANSRN--------------------
C13 RNSRGNSRNS-----SRSSSRGSSNANSRN--------------------
C14 RNSRGNSRNS-----SRSSSRGSSNANSRN--------------------
C15 TGGNSQSSSR-----ASSNSRNSSRSNSRG----------------GRST
C16 SRSGSQASSR-----SSSRSRGNSRTSTPG--------------------
C17 SRNGSQASSR-----SSSRSRGNSRTSTPG--------------------
C18 TGGNSQSSSR-----ASSASRNSSRSNSRG----------------SRSG
C19 TGGNSQSSSR-----ASSASRGSSRSSSRG----------------ARSG
. . : . .. :
C1 -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG
C2 -SSRGNSPARMASGGGE----TALALLLLDRLNQL---------ESKVSG
C3 GQQRNNNQQRQGSGNAGNNT-ADLAAAIVLALEKAGLARDT---EKAPKK
C4 -SSRGNSPARMAIGGGE----TALALLLLDRLNQL---------ESKVSG
C5 GQQRNNNQQRQGSGNAGNNT-ADLAAAIVLALEKAGLARDT---EKAPKK
C6 -GSRNASPGRNAPNVASGN--EPWMAYLVQKLEAL---------ENKVNG
C7 QRARSQSRNRGSNNNQPQNQ-VDIVAAVKAALQQLGVGNQNQGGTGKKSK
C8 QRSRNNSKSRGQNNQSNNSQ-ADIVAAVKQALKELGVSPQEK--KNKQKG
C9 QRSRNNSKSRSQNNSQPQNQQVDIVAAVKQALKELGVSPQEK--KQKQKG
C10 QRSRNNSKSRSQNNSQPQNQQVDIVAAVKQALKELGVSPQEK--KQKQKG
C11 -GSRGASPGRPAATPSA----EPWMAYLVQKLEKL---------ESQVNG
C12 -QSRSNSPGRGSAPPSGG---EPWMAYLIQKLENL---------EQRVDG
C13 -QSRSNSPGRGSAPPSGG---EPWMAYLIQKLENL---------EQRVDG
C14 -QSRSNSPGRGSAPPSGS---EPWMAYLIQKLENL---------EQRVDG
C15 SNSRGTSPVSHGVGSAESLAALPLLLDLQKRLADL------------ESG
C16 -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG
C17 -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG
C18 NSSRGTSPGPSGVGAVGG---EMLYLDLLNRLQAL------------ESG
C19 NSSRSASPGPAGIGAVGGDASSILYLSLLKRLEDL------------EAG
*. . : *
C1 KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG
C2 KG--QQQGQTVTKKSAAEASKKPRQ-------KRTATKQYNVTQAFGRRG
C3 ESPNNNKKQKSRASSPAPAQSKNTDQLTKVVWKRVPDPSCNVKQCF---G
C4 KG--QQQGQTVTKKSAAEASKKPRQ-------KRTATKQYNVTQAFGRRG
C5 ESPNNNKKQKSRASSPAPAQSKNTDQLTKVVWKRMPDPSCNVKQCF---G
C6 PKE-TKKPVQVTKNEAAANAKKLRH-------KRTPHKGSGVTTNYGRRG
C7 SNSGVNTPKEQRAKSPAKTPPVQRKQMERPVWKRVPNSSENVTACF---G
C8 STSGNNTPKEQRSKSPAPSPNTQRKQIERPVWKRVPTSAEDVTVCF---G
C9 NTSGNNTPKEQRAKSPARSPSSPRKQLERPVWKRVPTEAENVTQCF---G
C10 NTSGNNTPKEQRAKSPARSPASPRKQLERPVWKRVPTEAENVTQCF---G
C11 TKPVTKNPLQVTKNEAAANAKKLRH-------KRTAHKGSGVTMNYGRRG
C12 KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNATQNYGRRG
C13 KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNATQNYGRRG
C14 KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNVTQNYGRRG
C15 K---SKQPKVVTKKDASAAKNKMRH-------KRVATKNFNVTQAFGLRG
C16 KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG
C17 KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG
C18 KTK-QAQPKVITKKDAVAAKNKMRH-------KRVATKGFNMVQAFGLRG
C19 KS--KSAPKVVTKKDAAAAKNKMRH-------KRVATKSFNMVQAFGRRG
. . . ** . . : *
C1 PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C2 PEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C3 PRSTYQNFGDEDAVEKGVRAKHYPSWAELTPTTAALLFGGEVMTVEDGED
C4 PEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C5 PRSTYQNFGDEEAVEKGVRAKHYPSWAELTPNTAALLFGGEVMTVEDGED
C6 PGDLEGNFGDLNMLKLGTDDSRFPAAAQMAPNVASFLFMSHFSVREENDA
C7 PRDAVHNFGDSDVVHHGTDAKHWPQLAELIPTPAALAFGSEISTTEVGDK
C8 PRDTQQNFGDQDLVRHGVDAKHYPQLAEFVPGTAALLFGGEVSTRESGED
C9 PRDTLRNFGDRELTLRGVEAKNYPQIAEFVPTPAALLFGGEVSTREAGED
C10 PRDTLRNFGDRELTLRGVEAKNYPQIAEFVPTPAALLFGGEVSTREAGED
C11 PGDLEGNFGDLDMLKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTREEGDA
C12 PGNLEGNFGDQEFLKLGTDDPRFPVVAQMAPNTSSFVFMSHFTPRYEADA
C13 PGNLEGNFGDQEFLKLGTDDPRFPVVAQMAPNTSSFVFMSHFTPRYEADA
C14 PGNLEGNFGDQDFLKLGTDDPRFPVVAQMAPNTSSFVFMSQFTPRYESDA
C15 PGPLQGNFGDMNYNKFGTEDPRWPQMAELAPSASAFMSMSQFKLTHQSND
C16 PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C17 PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C18 PGDLQGNFGDLQLNKLGTEDPRWPQIAELAPSASAFIGMSQFKLTHQSND
C19 PGDLQGNFGDLQLNKLGTEDPRWPQIAELAPSASAFMGMSQFKLTHQSND
* **** : *. .:. *:: * ::: ... .
C1 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C2 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C3 I------VIQYTYQMRVPKTTPALQTFL----PQVSAFAN-----SGGDD
C4 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C5 I------VIQYTYQMRVPKTTPALQTFL----PQVSAFAN-----ASGDD
C6 L------WLHYKGAIKLPKDDPNYDQWTKILGENLNAYKNFPPVEPKKDK
C7 V------EITYTYKMKVDKADKNLPAFL----QQVSAYAQ-----P----
C8 V------EITFHYKLKVKKSDKNLPLFL----QQVSAYAL-----P----
C9 V------EITFHYKMKVKKDDKNLPLFL----QQVSAYAL-----P----
C10 V------EITFHYKMKVKKDDKNLPLFL----QQVSAYAL-----P----
C11 M------WLHYKGAIKLPKDDPNYDQWTKILAENLNAYRDFPPPAPKKDK
C12 L------WLDYTGSIKLPRDDPNFPQWEKLLAENIDAYKSFPPPKPKSDK
C13 L------WLDYTGSIKLPRDDPNFPQWEKLLAENIDAYKSFPPPKPKSDK
C14 L------WLDYTGSIKLPRDDPNFPQWEKLLAENLDAYKSFPPPKPKSDK
C15 DKGEPIYFLSYSGAIKLDPKNPNYKKWLELLEANIDAYKTF----PKKER
C16 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C17 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C18 TDGAPVYFLRYSGAIKLDPKNPNYNKWLELIEQNVDAYKTF----PKKEK
C19 ADGSPVYFLRYSGAIKLDPKNPNYQKWMELLEANIDAYKSF----PVKEK
: : ::: ::.*: .
C1 KKKTDEA-------------------------------------------
C2 KKKTDEA-------------------------------------------
C3 ASESGQD------------------------------------MPVVTSA
C4 KKKTDEA-------------------------------------------
C5 ESESGQE------------------------------------MPVVTSA
C6 KKKEEAS--VEVAVYEDAATGTDQPIVQKIWVKDDGVQTDDEWIGGDDTV
C7 --------------------------------------------------
C8 --------------------------------------------------
C9 --------------------------------------------------
C10 --------------------------------------------------
C11 KKKEETT--QETVIFEDASTGTDQP-VVKVWVKDQDAQTDDEWLGGDETV
C12 KKKSDKSDSAAGPSEDLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI
C13 KKKSDKSDSAAGPSEDLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI
C14 KKKSDKSDSATGPSADLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI
C15 KPKTTED---------------------------------GASASSSASQ
C16 KKKTDEA-------------------------------------------
C17 KKKTDEA-------------------------------------------
C18 KQKAPKE-------------------------------------------
C19 KQKADDN-----------------------------KQDSTEDSGDLFAE
C1 ----QPLPQR-KKLPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C2 ----QPLPQRQKKQPIVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C3 AESAAPAPASTPKLNPRAETFVPPKVDPNYFAGMKVEIMNKTISDDSTV
C4 ----QPLPQRQKKQPIVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C5 AESAAPAPAPTPKLNPKAETFVPPKVDPNYFAGMKVEIMNKTISDDSTV
C6 YEEEDDKPKAQRRHKKRASTASR--VT----------VADPTNLANERS
C7 ----SQANQISSQLNPVAPVFTPGMDD-------SVEIIDQVFDTDV--
C8 ----SQAPNIPSQLNPIAPDFTPGFEM----VNETVEIIDQVYDTPDA-
C9 ----SQAPNVPSQLNPVAPDFTPSGVE---MVNETVEIIDQVYDSFDA-
C10 ----SQAPNVPSQLNPVAPDFTPSGVE---MVNETVEIIDQVYDSFDA-
C11 YEEEDDRPKTQRRHKKRGSTASR--VT----------IADPTNAGAERS
C12 YEDENDKPKAQRRQSIKKRNATHQRHV----------SIDGAAQSSA--
C13 YEDENDKPKAQRRQSIKKRNATHQRHV----------SIDGAAQSSA--
C14 YEDENDKPKAQRRQSIKKRNAQRHV------------SIDGSAQSSA--
C15 MEDVDAKPQRKPKSRVAGSITMRSGSS--------PALQDVNFDSEA--
C16 ----QPLPQR-KKQPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C17 ----QPLPQRQKKQPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C18 EPSDQMNVQPPKEQRVQGSITQRSRTP-------RPSVQPGPMTDVNTD
C19 VVASAMASQSQPQRAPKGSITQRSRAP-----RAPVSQMEDVNQTDDRQ
.
-- Starting log on Thu Oct 27 00:03:59 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.08 sec, SCORE=999, Nseq=19, Len=549
C1 -MSDNGTQNQRSASR-ITFGGPSDSTDNNQDGGRSGARPKQR--------
C2 MSDNGPQPSQRSAPR-ITFGGPTDSIDNNQNGGRNGARPKQR--------
C3 -------------MSSVKFE-------------ASGRTGRTP--------
C4 MSDNGPQPSQRSAPR-ITFGGPTDSIDNNQNGGRNGARPKQR--------
C5 -------------MSSVKFE-------------ASGRTGRTP--------
C6 MSGRNKPRSGTSTPK-VTFKQESDGSD-SESERRASIRPKNK-------G
C7 -------------MASVSFE------------QQRGRSGRVP--------
C8 -------------MASVSFD-----------DQPRGRGGRMP--------
C9 -------------MASVSFD-----------DQSRGRSGRVP--------
C10 -------------MASVSFD-----------DQSRGRSGRVP--------
C11 MSGRNRSRPGTPSPK-VTFKQESDGSD-SESDRRNGNRTGARSKNNNGRS
C12 MSGRRTPR---NQPQ-VSFKNESD-SD-SESGARSQSRGRNSNNNNNGGN
C13 MSGRRTPR---NQPQ-VSFKNESD-SD-SESGARSQSRGRNSNNNNNGGN
C14 MSGRRTPR---NQPQ-VSFKNESD-SD-SESGQRSQSRGRNPNNNNNGGN
C15 -------MATPAAPRTISFA---DNND-NQTNQQQRGRGRNP--------
C16 -MSDNGTQNQRSASR-ITFGGPSDSTDNNQDGGRSGARPKQR--------
C17 -MSDNGPQNQRSAPR-ITFGGPSDSTDNNQDGGRSGVRPKQR--------
C18 -------MATPAAPRAVSFA---DNND-NSNNNQSRGRGRNP--------
C19 -------MATPAAPRAVTFG---DNNDNNTNTQQSRGRGRTP--------
:.*
C1 ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG
C2 ----------RPQGLPNNTASWFTALTQHGKEEL-RFSRGQGVPINTNSG
C3 -------------------LSYFAPITVTSGKNLWNVLPKNAVPSGKG-K
C4 ----------RPQGLPNNTASWFTALTQHGKEEL-RFSRGQGVPINTNSG
C5 -------------------LSYFAPITVTSGKNLWNVLPKNAVPSGKG-K
C6 ----SSFKPEKPKAAPPQNVSWFAPLVQTGKNDL-RFPRGQGVPISQGVD
C7 -------------------LSFFYPVIVTDNTPFWKVMPNNAVPNGMG-T
C8 -------------------LSYYYPIMVTDGKPLFKVLQSNAVPTGKG-T
C9 -------------------LSFYNPVMVTDDKPLFKVMPHNAVPTGKG-N
C10 -------------------LSFYNPVMVTDDKPLFKVMPHNAVPTGKG-N
C11 ----SAPRPEKPKAAPLQNVSWFAPLVQTGKSEL-RFARGEGVPVSQGVD
C12 GGARRKDKPEKPRAAPAQNVSWFLPIVQTGKQDL-RFARGEGVPVSQGVD
C13 GGARRKDKPEKPRAAPAQNVSWFLPIVQTGKQDL-RFARGEGVPVSQGVD
C14 GGARRKDKPEKPRAAPQQNVSWFLPLVQTGKNDL-RFPRGQGVPITQGVD
C15 ----------KPRPAPNNTVSWYTGLTQHGKNPL-AFPPGQGVPLNANST
C16 ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG
C17 ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG
C18 ----------KPRPAPNNTVSWYTGLTQHGKVSL-SFPPGQGVPLNANST
C19 ----------KPRPAPNNTVSWYTGLTQHGKVPL-SFPPGQGVPLNANST
*:: : . : . :.** .
C1 RDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C2 PDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C3 ANQQVGYWSEQTR-WKMQKGERVEKPSFWHFYFLGTGPHADAKFRERIQG
C4 PDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C5 ANQQVGYWSEQTR-WKMQKGERVEKPSFWHFYFLGTGPHADAKFRERIQG
C6 PVYNHGYWLRTQRSFQKG-GKLVQANPRWYFYYTGTGRYGDMRYGTKNPD
C7 KDERIGYWNEQKR-WRMRKGQRIDLPSKWHFYFLGTGPHKEASFRQRLDG
C8 KEQQIGYWNMQAR-WRMVKGVRKDLDPKWHFYYLGTGPHADAPFRQRLEG
C9 KSQQIGYWNMQPR-WRMVKGQRKDLTPKWHFYYLGTGPHAEAPFRQKLDG
C10 KSQQIGYWNMQPR-WRMVKGQRKDLTPKWHFYYLGTGPHAEAPFRQKLDG
C11 PTYEHGYWLRTQRSFQKG-GKQVLANPRWYFYYTGTGRFGDLRFGTKNPD
C12 ITYQHGYWLRRQRTFNKG-GKQVQANPRWFFYYTGTGPYEGLRYGSRNND
C13 ITYQHGYWLRRQRTFNKG-GKQVQANPRWFFYYTGTGPYEGLRYGSRNND
C14 PTFQHGYWLFRQRSFQKG-GKQVMANPRWYFYYTGTGPYEGLRYGSKSND
C15 TAQNAGYWRRQDRKINTGNGVK-QLSPRWFFYYTGTGPEANLPFRSVKDG
C16 TDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C17 RDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
C18 PAQNAGYWRRQDRKINTGNGTK-SLAPRWYFYYTGTGPEANLPFRAVKDG
C19 PAQNAGYWRRQDRKINTGNGTK-QLAPRWFFYYTGTGPEANLPFRAVKDG
. **: * . * . *.**: *** : .
C1 IVWVAIEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG
C2 IVWVATEGALNTPKDHIGTRNPNNNAATV---LQLPQGTTLP-KGFYAEG
C3 VVWVSKANADLKP-TDLGTRSKARSLIIPKFDIELPDDIEIV-DKSSAPN
C4 IVWVATEGALNTPKDHIGTRNPNNNAATV---LQLPQGTTLP-KGFYAEG
C5 VVWVSKANADLKP-TDLGTRSKARSLITPKFDIELPDDIEIV-DKSSAPN
C6 LIWVGEEGANVNRVGDMGTRNPNNDGAIS---VQLHDG--IP-KGFYAEG
C7 VYWVAVNGAKTQP-TSLGSRKKSAAMMVPQFSVSLPSNIQVQTENASAPA
C8 VFWVAVQGSKTEP-TGLGVRKRNAPLLKPQFSFKLPVNVEIQEDSASRPN
C9 VFWVAVQGSDTQP-TGLGVRKRNQPLIKPQFAVKLPANIEIQEENASKPN
C10 VFWVAVQGSDTQP-TGLGVRKRNQPLIKPQFAVKLPANIEIQEENASKPN
C11 IVWVGQEGANINRLGDMGTRNPSNDSAIP---VQLTGG--IP-KGFYAEG
C12 IIWVGNEGANVNRLGDMGTRNPANDAGIP---VQLAEG--IP-KGFYAEG
C13 IIWVGNEGANVNRLGDMGTRNPANDAGIP---VQLAEG--IP-KGFYAEG
C14 LIWVGNEGANVNRIGDMGTRNPANDAGLV---VQLADG--IP-KGFYAEG
C15 IVWVYEEGATDAP-SVFGTRNPANDAAIV---CQFAPGTLIP-KNFHIEG
C16 IVWVATEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG
C17 IVWVATEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG
C18 IIWVHEDGATDAP-STFGTRNPNNDAAIV---TQFAPGTKLP-KNFHIEG
C19 IVWVHEEGATDAP-STFGTRNPNNDAAIV---TQFAPGTKLP-KNFHIEG
: ** .: :* *. .: . : .
C1 SRSGSQASSR-----SSSRSRGNSRTSTPG--------------------
C2 SRGGSQASSR-----SSSRSRGNSRNSTPG--------------------
C3 SRGNSRSQSRGAKSGSKSRGNSQTRDNSKS-RDNSNNRGKSQSRNNSRSR
C4 SRGGSQASSR-----SSSRSRGNSRNSTPG--------------------
C5 SRGNSRSQSRGAKSGSKSRGNSQTRDNSKS-RDNSNNRGKSQSRNNSRSR
C6 RNSRSNSRNS-----SRNSSRASSQGNSRA--------------------
C7 SRNQSQNR-------SQSANRSQSRGPNQNVNQNQ----------NTNGN
C8 SRNPSSNRDR-----SQSGNRSASSGPKQGNSQNQ---NNSSQGNNSNNQ
C9 SRNPSTNRDR-----SQSGNRSASRGPQQGNTQNQNQNNNSSKGNQNNNQ
C10 SRNPSTNRDR-----SQSGNRSASRGPQQGNTQNQNQNNNSSKGNQNNNQ
C11 RGSRGNSRSS-----SRNSSRASSRGNSRA--------------------
C12 RNSRGNSRNS-----SRSSSRGSSNANSRN--------------------
C13 RNSRGNSRNS-----SRSSSRGSSNANSRN--------------------
C14 RNSRGNSRNS-----SRSSSRGSSNANSRN--------------------
C15 TGGNSQSSSR-----ASSNSRNSSRSNSRG----------------GRST
C16 SRSGSQASSR-----SSSRSRGNSRTSTPG--------------------
C17 SRNGSQASSR-----SSSRSRGNSRTSTPG--------------------
C18 TGGNSQSSSR-----ASSASRNSSRSNSRG----------------SRSG
C19 TGGNSQSSSR-----ASSASRGSSRSSSRG----------------ARSG
. . : . .. :
C1 -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG
C2 -SSRGNSPARMASGGGE----TALALLLLDRLNQL---------ESKVSG
C3 GQQRNNNQQRQGSGNAGNNT-ADLAAAIVLALEKAGLARDT---EKAPKK
C4 -SSRGNSPARMAIGGGE----TALALLLLDRLNQL---------ESKVSG
C5 GQQRNNNQQRQGSGNAGNNT-ADLAAAIVLALEKAGLARDT---EKAPKK
C6 -GSRNASPGRNAPNVASGN--EPWMAYLVQKLEAL---------ENKVNG
C7 QRARSQSRNRGSNNNQPQNQ-VDIVAAVKAALQQLGVGNQNQGGTGKKSK
C8 QRSRNNSKSRGQNNQSNNSQ-ADIVAAVKQALKELGVSPQEK--KNKQKG
C9 QRSRNNSKSRSQNNSQPQNQQVDIVAAVKQALKELGVSPQEK--KQKQKG
C10 QRSRNNSKSRSQNNSQPQNQQVDIVAAVKQALKELGVSPQEK--KQKQKG
C11 -GSRGASPGRPAATPSA----EPWMAYLVQKLEKL---------ESQVNG
C12 -QSRSNSPGRGSAPPSGG---EPWMAYLIQKLENL---------EQRVDG
C13 -QSRSNSPGRGSAPPSGG---EPWMAYLIQKLENL---------EQRVDG
C14 -QSRSNSPGRGSAPPSGS---EPWMAYLIQKLENL---------EQRVDG
C15 SNSRGTSPVSHGVGSAESLAALPLLLDLQKRLADL------------ESG
C16 -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG
C17 -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG
C18 NSSRGTSPGPSGVGAVGG---EMLYLDLLNRLQAL------------ESG
C19 NSSRSASPGPAGIGAVGGDASSILYLSLLKRLEDL------------EAG
*. . : *
C1 KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG
C2 KG--QQQGQTVTKKSAAEASKKPRQ-------KRTATKQYNVTQAFGRRG
C3 ESPNNNKKQKSRASSPAPAQSKNTDQLTKVVWKRVPDPSCNVKQCF---G
C4 KG--QQQGQTVTKKSAAEASKKPRQ-------KRTATKQYNVTQAFGRRG
C5 ESPNNNKKQKSRASSPAPAQSKNTDQLTKVVWKRMPDPSCNVKQCF---G
C6 PKE-TKKPVQVTKNEAAANAKKLRH-------KRTPHKGSGVTTNYGRRG
C7 SNSGVNTPKEQRAKSPAKTPPVQRKQMERPVWKRVPNSSENVTACF---G
C8 STSGNNTPKEQRSKSPAPSPNTQRKQIERPVWKRVPTSAEDVTVCF---G
C9 NTSGNNTPKEQRAKSPARSPSSPRKQLERPVWKRVPTEAENVTQCF---G
C10 NTSGNNTPKEQRAKSPARSPASPRKQLERPVWKRVPTEAENVTQCF---G
C11 TKPVTKNPLQVTKNEAAANAKKLRH-------KRTAHKGSGVTMNYGRRG
C12 KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNATQNYGRRG
C13 KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNATQNYGRRG
C14 KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNVTQNYGRRG
C15 K---SKQPKVVTKKDASAAKNKMRH-------KRVATKNFNVTQAFGLRG
C16 KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG
C17 KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG
C18 KTK-QAQPKVITKKDAVAAKNKMRH-------KRVATKGFNMVQAFGLRG
C19 KS--KSAPKVVTKKDAAAAKNKMRH-------KRVATKSFNMVQAFGRRG
. . . ** . . : *
C1 PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C2 PEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C3 PRSTYQNFGDEDAVEKGVRAKHYPSWAELTPTTAALLFGGEVMTVEDGED
C4 PEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C5 PRSTYQNFGDEEAVEKGVRAKHYPSWAELTPNTAALLFGGEVMTVEDGED
C6 PGDLEGNFGDLNMLKLGTDDSRFPAAAQMAPNVASFLFMSHFSVREENDA
C7 PRDAVHNFGDSDVVHHGTDAKHWPQLAELIPTPAALAFGSEISTTEVGDK
C8 PRDTQQNFGDQDLVRHGVDAKHYPQLAEFVPGTAALLFGGEVSTRESGED
C9 PRDTLRNFGDRELTLRGVEAKNYPQIAEFVPTPAALLFGGEVSTREAGED
C10 PRDTLRNFGDRELTLRGVEAKNYPQIAEFVPTPAALLFGGEVSTREAGED
C11 PGDLEGNFGDLDMLKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTREEGDA
C12 PGNLEGNFGDQEFLKLGTDDPRFPVVAQMAPNTSSFVFMSHFTPRYEADA
C13 PGNLEGNFGDQEFLKLGTDDPRFPVVAQMAPNTSSFVFMSHFTPRYEADA
C14 PGNLEGNFGDQDFLKLGTDDPRFPVVAQMAPNTSSFVFMSQFTPRYESDA
C15 PGPLQGNFGDMNYNKFGTEDPRWPQMAELAPSASAFMSMSQFKLTHQSND
C16 PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C17 PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
C18 PGDLQGNFGDLQLNKLGTEDPRWPQIAELAPSASAFIGMSQFKLTHQSND
C19 PGDLQGNFGDLQLNKLGTEDPRWPQIAELAPSASAFMGMSQFKLTHQSND
* **** : *. .:. *:: * ::: ... .
C1 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C2 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C3 I------VIQYTYQMRVPKTTPALQTFL----PQVSAFAN-----SGGDD
C4 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C5 I------VIQYTYQMRVPKTTPALQTFL----PQVSAFAN-----ASGDD
C6 L------WLHYKGAIKLPKDDPNYDQWTKILGENLNAYKNFPPVEPKKDK
C7 V------EITYTYKMKVDKADKNLPAFL----QQVSAYAQ-----P----
C8 V------EITFHYKLKVKKSDKNLPLFL----QQVSAYAL-----P----
C9 V------EITFHYKMKVKKDDKNLPLFL----QQVSAYAL-----P----
C10 V------EITFHYKMKVKKDDKNLPLFL----QQVSAYAL-----P----
C11 M------WLHYKGAIKLPKDDPNYDQWTKILAENLNAYRDFPPPAPKKDK
C12 L------WLDYTGSIKLPRDDPNFPQWEKLLAENIDAYKSFPPPKPKSDK
C13 L------WLDYTGSIKLPRDDPNFPQWEKLLAENIDAYKSFPPPKPKSDK
C14 L------WLDYTGSIKLPRDDPNFPQWEKLLAENLDAYKSFPPPKPKSDK
C15 DKGEPIYFLSYSGAIKLDPKNPNYKKWLELLEANIDAYKTF----PKKER
C16 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C17 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
C18 TDGAPVYFLRYSGAIKLDPKNPNYNKWLELIEQNVDAYKTF----PKKEK
C19 ADGSPVYFLRYSGAIKLDPKNPNYQKWMELLEANIDAYKSF----PVKEK
: : ::: ::.*: .
C1 KKKTDEA-------------------------------------------
C2 KKKTDEA-------------------------------------------
C3 ASESGQD------------------------------------MPVVTSA
C4 KKKTDEA-------------------------------------------
C5 ESESGQE------------------------------------MPVVTSA
C6 KKKEEAS--VEVAVYEDAATGTDQPIVQKIWVKDDGVQTDDEWIGGDDTV
C7 --------------------------------------------------
C8 --------------------------------------------------
C9 --------------------------------------------------
C10 --------------------------------------------------
C11 KKKEETT--QETVIFEDASTGTDQP-VVKVWVKDQDAQTDDEWLGGDETV
C12 KKKSDKSDSAAGPSEDLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI
C13 KKKSDKSDSAAGPSEDLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI
C14 KKKSDKSDSATGPSADLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI
C15 KPKTTED---------------------------------GASASSSASQ
C16 KKKTDEA-------------------------------------------
C17 KKKTDEA-------------------------------------------
C18 KQKAPKE-------------------------------------------
C19 KQKADDN-----------------------------KQDSTEDSGDLFAE
C1 ----QPLPQR-KKLPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C2 ----QPLPQRQKKQPIVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C3 AESAAPAPASTPKLNPRAETFVPPKVDPNYFAGMKVEIMNKTISDDSTV
C4 ----QPLPQRQKKQPIVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C5 AESAAPAPAPTPKLNPKAETFVPPKVDPNYFAGMKVEIMNKTISDDSTV
C6 YEEEDDKPKAQRRHKKRASTASR--VT----------VADPTNLANERS
C7 ----SQANQISSQLNPVAPVFTPGMDD-------SVEIIDQVFDTDV--
C8 ----SQAPNIPSQLNPIAPDFTPGFEM----VNETVEIIDQVYDTPDA-
C9 ----SQAPNVPSQLNPVAPDFTPSGVE---MVNETVEIIDQVYDSFDA-
C10 ----SQAPNVPSQLNPVAPDFTPSGVE---MVNETVEIIDQVYDSFDA-
C11 YEEEDDRPKTQRRHKKRGSTASR--VT----------IADPTNAGAERS
C12 YEDENDKPKAQRRQSIKKRNATHQRHV----------SIDGAAQSSA--
C13 YEDENDKPKAQRRQSIKKRNATHQRHV----------SIDGAAQSSA--
C14 YEDENDKPKAQRRQSIKKRNAQRHV------------SIDGSAQSSA--
C15 MEDVDAKPQRKPKSRVAGSITMRSGSS--------PALQDVNFDSEA--
C16 ----QPLPQR-KKQPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C17 ----QPLPQRQKKQPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA
C18 EPSDQMNVQPPKEQRVQGSITQRSRTP-------RPSVQPGPMTDVNTD
C19 VVASAMASQSQPQRAPKGSITQRSRAP-----RAPVSQMEDVNQTDDRQ
.
-- Starting log on Thu Oct 27 00:12:29 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result/gapped_alignment/fubar,JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 19 taxa and 1647 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C11
Taxon 4 -> C12
Taxon 5 -> C13
Taxon 6 -> C14
Taxon 7 -> C15
Taxon 8 -> C16
Taxon 9 -> C17
Taxon 10 -> C18
Taxon 11 -> C19
Taxon 12 -> C2
Taxon 13 -> C3
Taxon 14 -> C4
Taxon 15 -> C5
Taxon 16 -> C6
Taxon 17 -> C7
Taxon 18 -> C8
Taxon 19 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1666829551
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 18587937
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 2394125210
Seed = 508810849
Swapseed = 1666829551
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 254 unique site patterns
Division 2 has 229 unique site patterns
Division 3 has 309 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -20614.886122 -- 59.622190
Chain 2 -- -23636.935439 -- 59.622190
Chain 3 -- -23478.982631 -- 59.622190
Chain 4 -- -23892.618388 -- 59.622190
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -23729.040704 -- 59.622190
Chain 2 -- -24041.599690 -- 59.622190
Chain 3 -- -23543.576538 -- 59.622190
Chain 4 -- -24206.266714 -- 59.622190
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-20614.886] (-23636.935) (-23478.983) (-23892.618) * [-23729.041] (-24041.600) (-23543.577) (-24206.267)
1000 -- [-10229.765] (-10307.016) (-10255.260) (-10353.853) * (-10286.052) [-10235.284] (-10446.033) (-10372.449) -- 0:49:57
2000 -- (-10120.899) [-10127.812] (-10118.918) (-10127.252) * [-10128.437] (-10110.820) (-10153.056) (-10144.592) -- 0:49:54
3000 -- (-10122.848) [-10112.114] (-10124.379) (-10113.522) * (-10105.476) (-10119.299) (-10121.125) [-10109.376] -- 0:49:51
4000 -- (-10113.046) (-10105.443) (-10105.991) [-10105.505] * (-10105.422) (-10109.353) (-10111.524) [-10118.488] -- 0:49:48
5000 -- (-10114.838) [-10106.958] (-10108.191) (-10101.800) * (-10123.891) (-10120.170) [-10107.218] (-10116.250) -- 0:53:04
Average standard deviation of split frequencies: 0.039284
6000 -- (-10109.468) (-10112.405) (-10108.851) [-10102.314] * (-10113.666) [-10109.860] (-10107.271) (-10113.233) -- 0:52:27
7000 -- (-10114.647) [-10103.935] (-10110.232) (-10103.193) * [-10112.945] (-10118.186) (-10110.049) (-10121.498) -- 0:52:00
8000 -- (-10116.470) (-10113.030) [-10115.137] (-10109.395) * (-10106.431) [-10115.433] (-10110.132) (-10110.619) -- 0:51:40
9000 -- (-10103.901) [-10099.868] (-10113.592) (-10112.119) * (-10107.664) (-10110.441) [-10109.282] (-10111.855) -- 0:51:23
10000 -- (-10107.465) [-10106.808] (-10112.915) (-10115.073) * (-10105.016) [-10109.094] (-10108.293) (-10114.926) -- 0:51:09
Average standard deviation of split frequencies: 0.018608
11000 -- (-10125.729) (-10111.711) [-10115.306] (-10104.330) * (-10131.664) (-10119.288) [-10110.960] (-10109.487) -- 0:50:56
12000 -- [-10110.339] (-10108.568) (-10108.098) (-10108.602) * (-10123.864) (-10112.583) (-10113.148) [-10103.345] -- 0:50:46
13000 -- [-10108.955] (-10113.807) (-10126.402) (-10115.565) * (-10107.712) (-10118.839) [-10101.189] (-10113.482) -- 0:50:36
14000 -- (-10108.086) [-10107.301] (-10107.983) (-10114.994) * [-10109.086] (-10112.613) (-10103.706) (-10115.457) -- 0:50:28
15000 -- (-10113.646) (-10116.957) [-10109.720] (-10110.133) * (-10113.321) (-10123.578) (-10107.045) [-10109.361] -- 0:50:20
Average standard deviation of split frequencies: 0.021709
16000 -- (-10117.806) [-10108.574] (-10113.680) (-10101.137) * (-10109.228) (-10098.806) [-10111.120] (-10116.514) -- 0:50:13
17000 -- (-10107.604) (-10106.551) [-10103.762] (-10115.618) * [-10104.535] (-10102.558) (-10116.389) (-10117.330) -- 0:50:06
18000 -- [-10100.457] (-10111.084) (-10108.478) (-10113.280) * (-10108.095) (-10112.634) (-10121.112) [-10109.475] -- 0:50:00
19000 -- (-10108.978) (-10110.833) [-10096.687] (-10110.015) * [-10106.810] (-10107.519) (-10111.845) (-10112.887) -- 0:50:46
20000 -- (-10112.560) (-10113.102) (-10102.336) [-10116.138] * (-10118.257) (-10109.738) (-10120.286) [-10119.812] -- 0:50:38
Average standard deviation of split frequencies: 0.011405
21000 -- (-10105.823) [-10104.991] (-10105.547) (-10111.956) * (-10108.477) (-10107.545) [-10112.817] (-10121.945) -- 0:50:30
22000 -- (-10111.582) [-10103.262] (-10109.139) (-10123.998) * [-10107.876] (-10108.413) (-10110.164) (-10109.054) -- 0:50:22
23000 -- (-10100.360) (-10106.540) [-10108.374] (-10108.331) * (-10113.897) (-10115.394) (-10116.330) [-10109.072] -- 0:50:15
24000 -- [-10104.061] (-10110.633) (-10112.969) (-10132.107) * (-10125.480) (-10107.936) [-10103.997] (-10110.138) -- 0:50:09
25000 -- (-10115.941) (-10105.273) (-10114.391) [-10108.700] * (-10111.078) [-10116.856] (-10107.804) (-10113.767) -- 0:50:03
Average standard deviation of split frequencies: 0.007051
26000 -- (-10115.815) (-10100.536) (-10113.574) [-10112.513] * (-10108.505) [-10111.163] (-10101.880) (-10109.942) -- 0:50:34
27000 -- (-10111.607) [-10112.262] (-10115.494) (-10108.876) * (-10124.117) (-10108.892) [-10104.769] (-10106.874) -- 0:50:27
28000 -- (-10109.704) (-10116.077) (-10118.407) [-10099.717] * (-10113.453) (-10120.049) (-10122.715) [-10103.624] -- 0:50:20
29000 -- (-10104.044) (-10113.525) (-10112.028) [-10105.927] * (-10111.595) (-10112.045) (-10109.619) [-10114.069] -- 0:50:13
30000 -- [-10119.980] (-10107.781) (-10108.798) (-10117.363) * [-10109.636] (-10109.377) (-10101.241) (-10120.745) -- 0:50:07
Average standard deviation of split frequencies: 0.010248
31000 -- [-10104.616] (-10124.378) (-10106.639) (-10119.254) * (-10113.945) (-10106.018) (-10106.747) [-10118.917] -- 0:50:00
32000 -- [-10106.122] (-10128.854) (-10104.365) (-10112.806) * (-10104.564) (-10110.586) (-10121.566) [-10120.246] -- 0:49:54
33000 -- [-10101.362] (-10126.194) (-10109.313) (-10118.837) * (-10114.688) (-10113.865) (-10107.343) [-10109.971] -- 0:49:48
34000 -- (-10112.957) (-10120.571) [-10100.433] (-10107.696) * (-10109.376) (-10114.772) [-10106.864] (-10115.545) -- 0:49:43
35000 -- (-10118.478) (-10100.238) [-10106.045] (-10101.613) * [-10111.009] (-10102.185) (-10112.603) (-10124.423) -- 0:50:05
Average standard deviation of split frequencies: 0.008730
36000 -- (-10108.997) (-10105.161) (-10112.015) [-10102.678] * (-10106.351) (-10104.088) [-10106.175] (-10113.008) -- 0:49:59
37000 -- [-10109.711] (-10125.050) (-10102.330) (-10110.268) * (-10114.458) (-10117.045) (-10107.828) [-10109.424] -- 0:49:53
38000 -- (-10111.179) [-10104.950] (-10106.334) (-10117.129) * (-10112.329) [-10112.642] (-10106.122) (-10107.038) -- 0:49:47
39000 -- (-10125.815) (-10110.619) [-10103.980] (-10111.229) * (-10118.397) (-10126.082) [-10108.289] (-10111.210) -- 0:49:41
40000 -- (-10110.915) (-10106.672) (-10111.474) [-10109.207] * (-10105.177) (-10116.731) (-10111.684) [-10102.803] -- 0:49:36
Average standard deviation of split frequencies: 0.008372
41000 -- (-10106.514) [-10105.797] (-10110.241) (-10118.431) * (-10112.982) [-10106.398] (-10110.651) (-10098.306) -- 0:49:30
42000 -- (-10118.089) [-10107.825] (-10122.058) (-10110.766) * [-10112.810] (-10112.906) (-10119.171) (-10117.295) -- 0:49:25
43000 -- (-10111.728) (-10119.599) [-10115.555] (-10115.159) * (-10110.982) (-10109.264) (-10118.069) [-10108.545] -- 0:49:20
44000 -- (-10101.800) [-10106.441] (-10112.125) (-10101.423) * (-10106.350) [-10101.235] (-10124.247) (-10117.974) -- 0:49:14
45000 -- (-10116.212) [-10094.567] (-10110.439) (-10108.391) * (-10106.170) [-10106.958] (-10121.971) (-10114.900) -- 0:49:09
Average standard deviation of split frequencies: 0.006263
46000 -- (-10118.038) (-10102.724) (-10108.092) [-10111.661] * (-10104.414) (-10119.622) (-10107.444) [-10118.328] -- 0:49:04
47000 -- (-10117.188) [-10102.206] (-10114.707) (-10117.870) * (-10112.141) [-10103.891] (-10127.463) (-10118.321) -- 0:49:00
48000 -- [-10112.663] (-10119.324) (-10106.028) (-10114.302) * (-10109.604) (-10113.731) [-10107.955] (-10109.132) -- 0:48:55
49000 -- [-10108.153] (-10111.525) (-10117.777) (-10101.978) * [-10113.603] (-10110.505) (-10115.165) (-10114.161) -- 0:49:10
50000 -- (-10105.784) (-10106.282) (-10112.853) [-10119.015] * [-10109.211] (-10112.274) (-10122.134) (-10112.312) -- 0:49:05
Average standard deviation of split frequencies: 0.007753
51000 -- (-10112.384) (-10108.106) (-10120.014) [-10107.414] * (-10109.274) (-10115.052) (-10116.526) [-10104.231] -- 0:49:00
52000 -- (-10129.051) (-10112.940) (-10108.947) [-10116.534] * (-10116.196) (-10120.577) (-10119.111) [-10107.878] -- 0:48:55
53000 -- (-10114.117) [-10108.673] (-10108.744) (-10126.775) * (-10117.814) [-10108.971] (-10115.605) (-10112.245) -- 0:48:50
54000 -- (-10116.577) (-10104.486) (-10118.927) [-10114.280] * (-10106.229) (-10104.855) (-10114.197) [-10106.800] -- 0:48:45
55000 -- (-10114.502) (-10110.025) (-10115.156) [-10104.898] * (-10108.433) (-10127.126) [-10106.217] (-10112.116) -- 0:48:40
Average standard deviation of split frequencies: 0.008418
56000 -- [-10101.624] (-10103.205) (-10124.849) (-10101.721) * (-10115.823) (-10117.100) [-10112.567] (-10109.565) -- 0:48:36
57000 -- (-10108.330) (-10119.299) (-10122.516) [-10100.601] * [-10115.222] (-10111.627) (-10109.576) (-10107.541) -- 0:48:31
58000 -- (-10111.037) (-10107.317) [-10101.839] (-10104.445) * (-10118.984) (-10111.513) (-10118.690) [-10107.242] -- 0:48:27
59000 -- (-10113.936) (-10114.725) (-10111.510) [-10108.922] * (-10117.471) (-10107.878) [-10105.965] (-10109.324) -- 0:48:22
60000 -- [-10105.993] (-10112.035) (-10106.494) (-10108.489) * (-10108.112) [-10099.358] (-10115.361) (-10112.865) -- 0:48:18
Average standard deviation of split frequencies: 0.012519
61000 -- (-10108.706) (-10109.718) (-10109.961) [-10107.735] * (-10110.147) [-10111.432] (-10104.010) (-10105.655) -- 0:48:29
62000 -- (-10114.019) (-10109.478) [-10102.903] (-10116.794) * (-10118.822) (-10108.527) [-10107.483] (-10112.253) -- 0:48:24
63000 -- (-10112.273) (-10107.174) [-10108.212] (-10114.811) * [-10107.502] (-10106.376) (-10113.029) (-10101.891) -- 0:48:20
64000 -- (-10121.913) (-10108.501) (-10104.327) [-10115.819] * (-10114.132) (-10110.145) (-10123.442) [-10107.535] -- 0:48:15
65000 -- (-10121.003) (-10115.304) [-10102.425] (-10103.162) * [-10108.616] (-10122.352) (-10119.752) (-10110.965) -- 0:48:11
Average standard deviation of split frequencies: 0.009920
66000 -- (-10113.408) [-10110.871] (-10106.023) (-10112.989) * [-10111.268] (-10115.770) (-10115.747) (-10104.873) -- 0:48:06
67000 -- (-10113.615) (-10115.968) (-10111.517) [-10102.826] * [-10115.881] (-10108.674) (-10101.835) (-10117.444) -- 0:48:02
68000 -- (-10118.470) (-10116.844) (-10110.713) [-10104.652] * (-10122.293) (-10111.256) [-10105.370] (-10122.897) -- 0:47:58
69000 -- (-10124.353) (-10109.282) (-10106.622) [-10104.974] * (-10111.625) (-10107.154) [-10114.642] (-10103.738) -- 0:47:53
70000 -- (-10099.533) (-10109.979) [-10109.222] (-10124.125) * (-10111.055) [-10110.287] (-10113.098) (-10110.350) -- 0:47:49
Average standard deviation of split frequencies: 0.009636
71000 -- [-10109.026] (-10114.022) (-10109.759) (-10122.657) * (-10104.791) [-10101.174] (-10100.850) (-10098.937) -- 0:47:45
72000 -- [-10109.989] (-10105.968) (-10110.611) (-10108.849) * (-10107.499) [-10107.363] (-10103.013) (-10111.524) -- 0:47:41
73000 -- (-10117.907) [-10102.058] (-10109.776) (-10111.165) * (-10132.936) (-10113.604) [-10107.137] (-10126.210) -- 0:47:37
74000 -- (-10118.083) (-10120.071) [-10114.081] (-10106.193) * (-10105.590) (-10124.665) (-10110.780) [-10108.777] -- 0:47:33
75000 -- (-10113.332) (-10110.427) [-10102.862] (-10099.269) * (-10101.566) [-10106.558] (-10109.806) (-10111.552) -- 0:47:29
Average standard deviation of split frequencies: 0.008959
76000 -- (-10105.495) [-10100.714] (-10106.961) (-10107.518) * [-10101.711] (-10115.456) (-10111.742) (-10107.771) -- 0:47:37
77000 -- [-10108.940] (-10104.516) (-10107.344) (-10110.832) * (-10102.884) (-10113.951) (-10107.356) [-10106.700] -- 0:47:32
78000 -- (-10113.342) [-10103.293] (-10108.245) (-10119.527) * [-10102.570] (-10118.327) (-10124.014) (-10110.472) -- 0:47:28
79000 -- (-10107.482) [-10111.721] (-10110.916) (-10116.830) * (-10107.357) (-10114.407) (-10125.989) [-10108.566] -- 0:47:24
80000 -- (-10116.208) (-10100.837) [-10104.277] (-10104.382) * [-10100.997] (-10115.782) (-10121.279) (-10101.739) -- 0:47:20
Average standard deviation of split frequencies: 0.010064
81000 -- (-10118.730) (-10104.167) [-10108.891] (-10104.769) * (-10113.827) [-10113.758] (-10109.391) (-10116.268) -- 0:47:16
82000 -- (-10114.452) (-10107.394) (-10111.140) [-10104.164] * (-10100.673) [-10112.996] (-10103.894) (-10123.760) -- 0:47:12
83000 -- (-10107.042) (-10122.145) [-10105.456] (-10121.704) * [-10109.517] (-10110.499) (-10108.905) (-10116.617) -- 0:47:08
84000 -- (-10109.150) (-10111.932) (-10105.933) [-10107.580] * (-10129.229) (-10104.746) [-10105.987] (-10108.890) -- 0:47:04
85000 -- (-10114.716) (-10121.137) [-10103.605] (-10110.157) * [-10113.637] (-10122.457) (-10106.934) (-10104.656) -- 0:47:00
Average standard deviation of split frequencies: 0.010049
86000 -- (-10122.651) (-10111.944) [-10110.245] (-10115.069) * (-10104.316) (-10121.564) (-10109.244) [-10106.110] -- 0:46:56
87000 -- (-10115.574) (-10111.346) [-10106.452] (-10118.062) * (-10108.480) (-10104.206) (-10120.999) [-10107.956] -- 0:46:52
88000 -- (-10116.694) (-10109.303) (-10105.708) [-10108.018] * (-10108.982) (-10114.188) (-10121.359) [-10106.842] -- 0:46:58
89000 -- (-10111.883) (-10108.206) (-10120.035) [-10107.098] * (-10115.747) [-10104.722] (-10102.134) (-10111.047) -- 0:46:54
90000 -- (-10112.601) [-10105.038] (-10122.990) (-10114.049) * (-10112.780) [-10096.337] (-10111.111) (-10119.813) -- 0:46:50
Average standard deviation of split frequencies: 0.012132
91000 -- [-10096.585] (-10113.492) (-10117.077) (-10107.148) * (-10111.678) [-10115.687] (-10110.253) (-10102.968) -- 0:46:46
92000 -- (-10111.285) [-10105.273] (-10117.252) (-10114.903) * (-10109.154) (-10116.221) [-10104.694] (-10114.217) -- 0:46:42
93000 -- [-10103.068] (-10114.364) (-10110.786) (-10112.068) * (-10106.934) (-10119.989) (-10114.273) [-10103.912] -- 0:46:39
94000 -- (-10107.441) [-10113.168] (-10111.000) (-10119.255) * (-10116.228) [-10107.635] (-10103.408) (-10109.752) -- 0:46:35
95000 -- [-10110.074] (-10105.667) (-10109.949) (-10107.746) * (-10104.086) [-10106.162] (-10104.616) (-10113.475) -- 0:46:31
Average standard deviation of split frequencies: 0.014459
96000 -- (-10116.580) (-10101.176) (-10110.783) [-10101.561] * (-10112.501) (-10110.526) [-10115.687] (-10111.851) -- 0:46:27
97000 -- (-10113.755) (-10107.856) (-10118.038) [-10094.319] * [-10107.219] (-10115.992) (-10120.233) (-10111.260) -- 0:46:23
98000 -- (-10112.072) (-10114.723) (-10101.168) [-10101.663] * [-10109.928] (-10113.107) (-10108.123) (-10111.748) -- 0:46:19
99000 -- (-10114.720) (-10117.435) (-10102.853) [-10101.997] * (-10108.562) (-10110.479) [-10100.853] (-10122.657) -- 0:46:15
100000 -- (-10109.772) (-10110.612) [-10104.886] (-10110.177) * (-10109.553) (-10118.354) (-10102.121) [-10111.545] -- 0:46:12
Average standard deviation of split frequencies: 0.015609
101000 -- (-10108.883) (-10104.015) (-10111.646) [-10104.037] * (-10117.749) (-10114.743) [-10110.186] (-10125.165) -- 0:46:08
102000 -- (-10113.706) (-10103.043) (-10106.621) [-10107.696] * (-10127.605) [-10102.586] (-10109.179) (-10120.380) -- 0:46:04
103000 -- (-10107.221) (-10111.883) (-10106.872) [-10106.616] * (-10127.051) (-10119.638) (-10114.007) [-10107.700] -- 0:46:00
104000 -- (-10114.265) [-10107.211] (-10108.835) (-10107.367) * [-10107.339] (-10116.641) (-10105.979) (-10105.568) -- 0:46:05
105000 -- (-10117.680) [-10099.672] (-10115.018) (-10102.517) * (-10106.874) (-10114.052) [-10115.640] (-10109.486) -- 0:46:01
Average standard deviation of split frequencies: 0.018036
106000 -- (-10111.677) [-10111.804] (-10108.615) (-10109.251) * (-10108.909) (-10129.392) [-10109.552] (-10119.776) -- 0:45:57
107000 -- (-10117.999) (-10113.498) [-10104.596] (-10116.215) * (-10107.386) (-10106.973) (-10112.636) [-10107.272] -- 0:45:54
108000 -- (-10104.950) (-10116.483) (-10102.380) [-10113.003] * (-10114.446) (-10105.574) (-10126.270) [-10108.614] -- 0:45:50
109000 -- (-10117.940) [-10123.750] (-10103.821) (-10105.910) * [-10112.652] (-10109.216) (-10123.976) (-10109.972) -- 0:45:46
110000 -- (-10113.647) (-10106.802) (-10113.523) [-10100.072] * (-10111.698) [-10113.600] (-10106.435) (-10116.705) -- 0:45:42
Average standard deviation of split frequencies: 0.016565
111000 -- (-10114.129) [-10104.405] (-10125.167) (-10116.946) * [-10111.155] (-10118.611) (-10116.799) (-10105.289) -- 0:45:39
112000 -- (-10109.011) [-10102.331] (-10119.727) (-10104.626) * (-10111.199) (-10120.047) [-10111.830] (-10112.810) -- 0:45:35
113000 -- (-10113.241) (-10118.181) [-10104.403] (-10108.882) * (-10109.684) [-10105.591] (-10118.360) (-10112.912) -- 0:45:31
114000 -- (-10114.587) (-10105.744) (-10109.074) [-10103.565] * [-10099.845] (-10108.181) (-10120.831) (-10111.429) -- 0:45:27
115000 -- [-10114.132] (-10108.319) (-10123.887) (-10111.735) * [-10109.762] (-10121.733) (-10116.472) (-10116.871) -- 0:45:24
Average standard deviation of split frequencies: 0.017158
116000 -- [-10119.995] (-10112.007) (-10118.596) (-10117.860) * (-10118.044) (-10112.680) [-10106.113] (-10118.985) -- 0:45:20
117000 -- [-10117.346] (-10113.863) (-10112.925) (-10104.911) * [-10106.723] (-10115.427) (-10103.236) (-10112.702) -- 0:45:16
118000 -- [-10111.737] (-10105.426) (-10114.528) (-10111.934) * (-10103.152) (-10109.940) [-10103.529] (-10106.532) -- 0:45:20
119000 -- (-10117.674) (-10113.675) (-10108.102) [-10117.942] * (-10106.557) (-10107.559) [-10107.962] (-10105.793) -- 0:45:17
120000 -- (-10109.756) [-10115.590] (-10123.893) (-10108.486) * (-10103.638) (-10108.460) (-10116.333) [-10098.361] -- 0:45:13
Average standard deviation of split frequencies: 0.016929
121000 -- (-10108.027) [-10105.531] (-10120.496) (-10115.080) * (-10111.517) [-10109.142] (-10117.562) (-10115.668) -- 0:45:09
122000 -- (-10106.205) (-10117.074) (-10115.925) [-10106.605] * (-10111.896) (-10122.379) (-10112.242) [-10096.458] -- 0:45:05
123000 -- (-10102.594) (-10112.899) (-10112.397) [-10117.017] * (-10117.859) [-10097.391] (-10106.184) (-10112.458) -- 0:45:02
124000 -- (-10113.520) (-10109.858) [-10113.803] (-10106.162) * (-10111.914) (-10107.711) [-10097.074] (-10117.853) -- 0:44:58
125000 -- (-10117.622) (-10104.132) [-10093.624] (-10106.572) * [-10105.445] (-10109.450) (-10108.021) (-10107.654) -- 0:44:55
Average standard deviation of split frequencies: 0.015173
126000 -- (-10121.059) [-10121.724] (-10117.567) (-10116.795) * (-10118.334) (-10107.086) [-10107.524] (-10108.889) -- 0:44:51
127000 -- [-10113.895] (-10114.013) (-10110.248) (-10105.800) * (-10117.032) [-10113.578] (-10109.821) (-10111.880) -- 0:44:47
128000 -- (-10110.207) (-10109.404) [-10115.783] (-10109.349) * [-10104.605] (-10118.743) (-10104.690) (-10111.663) -- 0:44:44
129000 -- (-10113.242) (-10122.273) (-10121.902) [-10103.100] * (-10109.558) [-10101.717] (-10116.371) (-10116.002) -- 0:44:40
130000 -- (-10106.613) [-10107.454] (-10106.158) (-10111.936) * (-10103.576) [-10109.879] (-10127.154) (-10110.534) -- 0:44:36
Average standard deviation of split frequencies: 0.014431
131000 -- (-10100.235) [-10103.698] (-10101.640) (-10124.928) * (-10114.028) [-10105.945] (-10103.724) (-10104.881) -- 0:44:33
132000 -- [-10104.855] (-10113.922) (-10110.505) (-10110.863) * (-10113.153) [-10104.559] (-10101.044) (-10114.701) -- 0:44:29
133000 -- [-10109.104] (-10106.960) (-10107.304) (-10115.742) * [-10104.500] (-10113.992) (-10111.259) (-10115.279) -- 0:44:26
134000 -- (-10118.295) (-10104.663) [-10106.065] (-10112.449) * (-10107.648) (-10119.873) (-10114.365) [-10109.408] -- 0:44:29
135000 -- (-10117.246) [-10117.902] (-10106.930) (-10107.104) * (-10106.414) [-10108.588] (-10100.416) (-10108.264) -- 0:44:25
Average standard deviation of split frequencies: 0.014635
136000 -- (-10118.992) [-10114.403] (-10099.544) (-10119.532) * [-10103.793] (-10109.569) (-10110.987) (-10102.982) -- 0:44:21
137000 -- [-10103.981] (-10112.275) (-10107.821) (-10106.866) * (-10106.458) (-10112.753) [-10109.873] (-10116.912) -- 0:44:18
138000 -- (-10113.457) (-10109.695) [-10102.945] (-10095.692) * (-10108.388) [-10111.444] (-10105.472) (-10128.730) -- 0:44:14
139000 -- (-10119.691) (-10111.025) [-10105.219] (-10107.411) * (-10111.088) [-10114.291] (-10108.390) (-10114.463) -- 0:44:11
140000 -- (-10109.464) (-10115.347) [-10106.000] (-10116.385) * (-10112.133) [-10103.209] (-10113.977) (-10122.153) -- 0:44:07
Average standard deviation of split frequencies: 0.012846
141000 -- [-10107.497] (-10122.728) (-10105.302) (-10120.300) * (-10106.621) (-10111.179) [-10115.099] (-10103.837) -- 0:44:04
142000 -- [-10107.283] (-10122.636) (-10118.605) (-10136.044) * [-10108.980] (-10110.778) (-10118.076) (-10104.274) -- 0:44:00
143000 -- (-10114.410) [-10110.599] (-10111.534) (-10112.520) * (-10107.553) [-10103.478] (-10119.563) (-10113.950) -- 0:43:56
144000 -- (-10117.194) (-10108.187) [-10104.653] (-10101.826) * (-10107.909) (-10107.545) [-10107.833] (-10121.441) -- 0:43:53
145000 -- (-10109.621) (-10106.265) (-10109.732) [-10114.918] * (-10121.211) (-10110.527) (-10118.647) [-10109.114] -- 0:43:49
Average standard deviation of split frequencies: 0.012556
146000 -- [-10108.554] (-10118.184) (-10104.716) (-10108.587) * (-10119.033) (-10105.631) (-10124.474) [-10112.229] -- 0:43:52
147000 -- (-10118.352) (-10118.388) (-10111.748) [-10101.530] * (-10118.408) (-10110.458) (-10101.922) [-10109.028] -- 0:43:48
148000 -- (-10124.666) (-10106.482) (-10110.431) [-10109.769] * (-10116.419) [-10126.364] (-10105.945) (-10126.470) -- 0:43:45
149000 -- (-10111.520) (-10113.736) [-10108.891] (-10113.095) * (-10126.560) (-10104.034) (-10108.687) [-10114.714] -- 0:43:41
150000 -- (-10116.029) [-10106.820] (-10118.008) (-10132.070) * (-10108.299) [-10119.134] (-10104.243) (-10120.422) -- 0:43:38
Average standard deviation of split frequencies: 0.011472
151000 -- [-10110.634] (-10112.968) (-10114.658) (-10118.462) * [-10108.316] (-10112.933) (-10105.881) (-10105.629) -- 0:43:34
152000 -- (-10116.314) (-10110.446) [-10115.210] (-10116.711) * [-10108.217] (-10106.764) (-10112.292) (-10113.725) -- 0:43:30
153000 -- (-10115.020) [-10104.634] (-10113.935) (-10114.932) * (-10111.042) (-10109.924) (-10122.216) [-10104.612] -- 0:43:27
154000 -- (-10110.045) (-10117.584) (-10128.926) [-10106.401] * (-10110.093) (-10118.847) (-10114.914) [-10104.374] -- 0:43:23
155000 -- (-10111.422) [-10109.971] (-10103.496) (-10113.247) * [-10105.787] (-10111.047) (-10113.187) (-10104.258) -- 0:43:20
Average standard deviation of split frequencies: 0.011584
156000 -- [-10108.945] (-10124.238) (-10107.149) (-10117.536) * (-10110.018) (-10109.325) (-10113.062) [-10102.879] -- 0:43:16
157000 -- (-10115.050) (-10105.864) [-10113.147] (-10103.224) * (-10108.797) (-10115.139) [-10108.529] (-10112.204) -- 0:43:13
158000 -- (-10123.228) (-10113.799) [-10107.712] (-10112.609) * (-10116.836) (-10107.960) [-10111.899] (-10109.404) -- 0:43:09
159000 -- (-10127.535) (-10111.647) [-10125.709] (-10112.938) * [-10105.927] (-10110.860) (-10110.146) (-10102.150) -- 0:43:06
160000 -- [-10116.341] (-10113.333) (-10120.833) (-10103.760) * (-10104.391) (-10107.307) (-10101.290) [-10107.622] -- 0:43:03
Average standard deviation of split frequencies: 0.010921
161000 -- [-10118.248] (-10116.244) (-10117.129) (-10121.807) * (-10108.081) (-10130.588) (-10114.889) [-10098.992] -- 0:42:59
162000 -- [-10119.189] (-10110.055) (-10118.663) (-10115.236) * (-10104.874) [-10111.452] (-10099.900) (-10125.259) -- 0:43:01
163000 -- (-10107.035) (-10112.112) [-10104.940] (-10114.250) * (-10102.893) (-10117.677) [-10092.244] (-10114.436) -- 0:42:57
164000 -- (-10103.310) [-10106.806] (-10118.747) (-10108.057) * [-10104.709] (-10119.911) (-10109.392) (-10111.256) -- 0:42:54
165000 -- [-10109.371] (-10111.143) (-10121.923) (-10106.749) * (-10117.946) (-10109.906) [-10111.761] (-10111.065) -- 0:42:50
Average standard deviation of split frequencies: 0.009939
166000 -- (-10108.158) (-10116.411) (-10124.507) [-10116.352] * (-10118.128) (-10109.307) (-10098.202) [-10110.821] -- 0:42:47
167000 -- [-10106.059] (-10108.360) (-10125.061) (-10132.723) * (-10120.580) (-10101.147) [-10113.721] (-10112.328) -- 0:42:43
168000 -- (-10112.586) (-10115.499) [-10120.723] (-10112.114) * (-10116.637) (-10109.899) (-10106.139) [-10107.945] -- 0:42:40
169000 -- (-10110.876) [-10103.648] (-10116.403) (-10109.696) * (-10110.630) (-10117.978) [-10102.643] (-10123.686) -- 0:42:36
170000 -- (-10109.240) (-10114.198) (-10116.773) [-10111.340] * (-10103.748) (-10113.534) (-10108.128) [-10109.165] -- 0:42:33
Average standard deviation of split frequencies: 0.011049
171000 -- (-10122.364) (-10119.440) [-10115.056] (-10099.854) * (-10110.877) (-10100.835) (-10120.718) [-10109.929] -- 0:42:30
172000 -- (-10125.124) (-10124.421) [-10105.681] (-10135.352) * [-10100.012] (-10106.383) (-10113.313) (-10109.665) -- 0:42:26
173000 -- (-10121.607) (-10109.514) [-10105.557] (-10112.143) * [-10097.617] (-10105.760) (-10123.181) (-10121.424) -- 0:42:23
174000 -- (-10107.584) (-10116.270) [-10107.458] (-10103.910) * (-10102.531) (-10119.165) (-10115.653) [-10105.975] -- 0:42:24
175000 -- (-10120.223) (-10102.011) [-10112.042] (-10124.994) * (-10102.940) (-10099.685) [-10113.205] (-10108.690) -- 0:42:21
Average standard deviation of split frequencies: 0.013243
176000 -- (-10112.205) (-10114.292) (-10100.468) [-10099.651] * (-10105.678) (-10104.002) [-10108.086] (-10108.124) -- 0:42:17
177000 -- (-10108.714) (-10106.581) (-10108.911) [-10117.088] * (-10112.224) [-10108.846] (-10106.700) (-10116.684) -- 0:42:14
178000 -- (-10117.354) (-10102.552) [-10111.859] (-10116.856) * [-10104.608] (-10118.822) (-10108.866) (-10097.470) -- 0:42:10
179000 -- (-10127.464) [-10105.197] (-10120.864) (-10111.952) * [-10106.372] (-10105.599) (-10121.944) (-10113.693) -- 0:42:07
180000 -- (-10100.063) [-10104.620] (-10118.459) (-10116.810) * (-10115.147) [-10107.583] (-10114.767) (-10117.276) -- 0:42:03
Average standard deviation of split frequencies: 0.012756
181000 -- (-10108.403) [-10114.999] (-10118.099) (-10108.270) * (-10102.135) (-10106.319) [-10108.837] (-10115.726) -- 0:42:00
182000 -- [-10112.166] (-10100.817) (-10104.730) (-10103.251) * (-10115.097) (-10106.775) [-10111.063] (-10105.388) -- 0:41:56
183000 -- (-10124.821) [-10103.388] (-10112.968) (-10113.014) * [-10099.169] (-10105.427) (-10102.826) (-10107.912) -- 0:41:53
184000 -- (-10104.066) (-10111.386) (-10100.703) [-10103.093] * [-10102.199] (-10105.433) (-10106.991) (-10111.977) -- 0:41:50
185000 -- [-10106.048] (-10109.138) (-10117.794) (-10109.107) * (-10113.382) (-10114.402) [-10110.741] (-10107.147) -- 0:41:46
Average standard deviation of split frequencies: 0.013658
186000 -- (-10107.461) (-10111.183) (-10111.410) [-10102.204] * (-10113.710) (-10114.557) [-10103.225] (-10118.666) -- 0:41:43
187000 -- (-10101.843) (-10104.807) [-10101.005] (-10126.541) * [-10109.550] (-10104.634) (-10111.561) (-10115.101) -- 0:41:44
188000 -- (-10111.442) (-10100.441) [-10105.229] (-10119.808) * [-10109.531] (-10113.849) (-10120.872) (-10112.756) -- 0:41:40
189000 -- [-10111.647] (-10106.751) (-10108.652) (-10116.105) * (-10114.439) [-10112.501] (-10118.390) (-10119.479) -- 0:41:37
190000 -- (-10116.617) [-10105.507] (-10109.092) (-10111.685) * [-10107.032] (-10116.381) (-10114.020) (-10122.714) -- 0:41:33
Average standard deviation of split frequencies: 0.014285
191000 -- (-10121.884) [-10108.257] (-10109.318) (-10110.457) * (-10114.768) (-10114.269) (-10114.843) [-10108.027] -- 0:41:30
192000 -- [-10110.117] (-10103.924) (-10107.922) (-10126.142) * [-10110.797] (-10117.324) (-10111.126) (-10117.050) -- 0:41:27
193000 -- (-10108.053) (-10110.279) [-10124.202] (-10114.787) * (-10105.931) (-10106.739) [-10105.965] (-10122.339) -- 0:41:23
194000 -- [-10101.720] (-10108.526) (-10109.499) (-10110.484) * (-10098.107) (-10106.473) [-10117.366] (-10111.004) -- 0:41:20
195000 -- (-10116.212) (-10112.624) (-10119.597) [-10105.211] * (-10113.512) [-10116.349] (-10124.284) (-10104.671) -- 0:41:16
Average standard deviation of split frequencies: 0.014564
196000 -- (-10116.402) [-10101.357] (-10103.441) (-10108.841) * (-10124.786) (-10100.275) (-10104.525) [-10102.383] -- 0:41:17
197000 -- [-10108.162] (-10119.269) (-10126.948) (-10109.278) * (-10141.341) (-10117.229) (-10111.739) [-10105.602] -- 0:41:14
198000 -- [-10106.073] (-10105.022) (-10108.622) (-10112.839) * (-10119.150) [-10114.371] (-10116.249) (-10105.274) -- 0:41:10
199000 -- (-10124.635) (-10119.833) [-10106.265] (-10112.797) * [-10112.903] (-10127.303) (-10111.732) (-10110.108) -- 0:41:07
200000 -- (-10112.278) (-10112.232) [-10109.458] (-10117.085) * (-10110.651) (-10115.844) (-10114.432) [-10110.940] -- 0:41:04
Average standard deviation of split frequencies: 0.013573
201000 -- (-10113.668) (-10107.580) (-10099.258) [-10112.273] * [-10103.802] (-10110.314) (-10115.313) (-10109.836) -- 0:41:04
202000 -- (-10110.605) (-10122.895) (-10101.448) [-10110.746] * [-10104.550] (-10108.543) (-10104.402) (-10116.720) -- 0:41:01
203000 -- (-10128.984) (-10123.507) [-10109.396] (-10106.123) * [-10106.486] (-10102.885) (-10101.151) (-10112.697) -- 0:40:57
204000 -- (-10110.231) (-10120.226) (-10108.726) [-10113.380] * (-10108.320) (-10114.952) (-10101.035) [-10097.732] -- 0:40:54
205000 -- [-10099.253] (-10104.720) (-10106.810) (-10113.638) * (-10114.691) (-10130.224) (-10103.437) [-10108.676] -- 0:40:50
Average standard deviation of split frequencies: 0.012078
206000 -- (-10109.919) (-10127.207) [-10110.242] (-10111.614) * (-10105.236) (-10115.371) [-10104.760] (-10107.138) -- 0:40:47
207000 -- [-10112.830] (-10114.619) (-10108.945) (-10124.463) * (-10128.768) (-10105.420) [-10104.340] (-10102.825) -- 0:40:44
208000 -- (-10108.478) (-10116.451) [-10109.639] (-10122.031) * [-10104.501] (-10112.761) (-10110.629) (-10113.786) -- 0:40:40
209000 -- (-10118.271) (-10120.586) (-10110.742) [-10112.555] * [-10107.212] (-10124.807) (-10113.453) (-10107.324) -- 0:40:41
210000 -- [-10110.382] (-10116.210) (-10100.938) (-10108.744) * (-10107.002) (-10116.204) (-10123.261) [-10107.502] -- 0:40:37
Average standard deviation of split frequencies: 0.011437
211000 -- (-10108.568) (-10108.548) [-10112.600] (-10112.227) * (-10120.718) (-10103.775) [-10110.511] (-10102.085) -- 0:40:34
212000 -- (-10129.966) (-10110.285) [-10101.638] (-10118.672) * (-10116.890) (-10104.245) (-10109.103) [-10107.542] -- 0:40:30
213000 -- (-10109.689) (-10108.460) [-10107.074] (-10116.707) * (-10109.155) [-10102.478] (-10097.566) (-10114.185) -- 0:40:27
214000 -- (-10103.164) [-10100.120] (-10116.601) (-10107.721) * (-10116.332) (-10107.186) [-10109.249] (-10105.395) -- 0:40:24
215000 -- (-10104.677) [-10109.813] (-10115.826) (-10110.446) * (-10116.142) [-10106.850] (-10114.032) (-10122.439) -- 0:40:24
Average standard deviation of split frequencies: 0.010427
216000 -- [-10101.429] (-10106.771) (-10119.388) (-10107.026) * (-10115.896) [-10109.887] (-10115.696) (-10113.974) -- 0:40:20
217000 -- (-10099.905) [-10108.428] (-10113.830) (-10112.883) * (-10115.448) (-10113.952) (-10116.060) [-10105.108] -- 0:40:17
218000 -- (-10110.082) [-10107.644] (-10114.403) (-10107.148) * (-10123.999) (-10097.445) (-10111.417) [-10106.622] -- 0:40:14
219000 -- (-10107.632) (-10109.438) [-10111.781] (-10110.340) * (-10100.913) (-10103.738) (-10118.507) [-10114.607] -- 0:40:10
220000 -- (-10107.665) (-10114.314) (-10117.597) [-10110.515] * [-10105.645] (-10114.051) (-10120.768) (-10112.543) -- 0:40:07
Average standard deviation of split frequencies: 0.010207
221000 -- (-10125.034) [-10102.232] (-10101.390) (-10108.217) * (-10114.405) (-10109.810) [-10118.201] (-10126.763) -- 0:40:03
222000 -- (-10109.664) (-10115.070) (-10100.743) [-10106.336] * (-10117.359) [-10096.608] (-10117.635) (-10114.848) -- 0:40:00
223000 -- (-10112.299) (-10116.368) [-10112.543] (-10109.507) * (-10107.872) (-10110.111) [-10104.031] (-10107.700) -- 0:39:57
224000 -- (-10107.426) (-10113.816) [-10116.600] (-10105.515) * (-10123.159) (-10115.973) [-10115.496] (-10110.176) -- 0:39:57
225000 -- (-10107.240) (-10119.154) (-10105.392) [-10100.448] * [-10107.849] (-10111.830) (-10112.579) (-10112.529) -- 0:39:53
Average standard deviation of split frequencies: 0.009502
226000 -- [-10097.544] (-10120.229) (-10119.345) (-10105.684) * (-10097.777) (-10116.838) (-10116.245) [-10108.664] -- 0:39:50
227000 -- (-10116.627) (-10112.904) (-10124.698) [-10115.806] * [-10109.040] (-10112.879) (-10126.073) (-10108.868) -- 0:39:47
228000 -- (-10113.750) [-10106.819] (-10113.258) (-10106.530) * (-10103.828) [-10107.250] (-10124.423) (-10107.360) -- 0:39:43
229000 -- (-10115.021) [-10109.014] (-10107.700) (-10119.887) * (-10115.913) (-10110.164) [-10107.357] (-10107.547) -- 0:39:40
230000 -- (-10113.621) (-10113.186) [-10104.625] (-10127.843) * (-10109.643) (-10104.589) [-10110.631] (-10115.723) -- 0:39:40
Average standard deviation of split frequencies: 0.008402
231000 -- (-10102.646) [-10099.757] (-10114.237) (-10115.659) * [-10099.549] (-10113.409) (-10106.797) (-10109.781) -- 0:39:36
232000 -- [-10110.957] (-10106.196) (-10119.441) (-10113.525) * (-10114.579) (-10118.904) [-10106.256] (-10122.511) -- 0:39:33
233000 -- (-10115.108) (-10108.295) (-10114.876) [-10117.312] * [-10099.982] (-10109.874) (-10109.606) (-10119.025) -- 0:39:30
234000 -- (-10115.437) (-10113.316) [-10109.070] (-10116.820) * (-10104.774) [-10108.079] (-10106.541) (-10106.574) -- 0:39:26
235000 -- (-10117.693) (-10110.156) [-10101.543] (-10131.056) * (-10115.159) [-10103.555] (-10110.553) (-10112.586) -- 0:39:23
Average standard deviation of split frequencies: 0.007879
236000 -- (-10121.606) (-10109.764) [-10099.044] (-10118.033) * (-10108.338) (-10103.105) (-10113.846) [-10103.944] -- 0:39:19
237000 -- (-10111.859) (-10108.070) [-10104.115] (-10111.255) * (-10103.193) (-10113.218) (-10115.466) [-10099.014] -- 0:39:16
238000 -- (-10116.485) (-10112.636) (-10113.910) [-10103.392] * [-10096.492] (-10113.056) (-10125.789) (-10105.764) -- 0:39:16
239000 -- (-10119.739) [-10108.792] (-10118.594) (-10106.249) * (-10107.492) [-10109.761] (-10109.760) (-10107.507) -- 0:39:13
240000 -- (-10108.988) [-10100.771] (-10118.517) (-10111.804) * (-10108.650) (-10105.875) [-10105.054] (-10117.150) -- 0:39:09
Average standard deviation of split frequencies: 0.007944
241000 -- (-10115.754) [-10105.249] (-10109.445) (-10125.457) * (-10102.516) (-10115.570) [-10103.619] (-10120.750) -- 0:39:06
242000 -- (-10105.953) (-10108.674) (-10115.126) [-10112.638] * (-10112.452) [-10111.437] (-10104.271) (-10102.907) -- 0:39:02
243000 -- (-10113.763) (-10109.508) [-10109.783] (-10109.319) * (-10122.308) (-10110.952) [-10102.639] (-10106.664) -- 0:38:59
244000 -- (-10121.742) [-10108.665] (-10120.313) (-10111.763) * (-10109.156) (-10108.330) [-10099.159] (-10100.913) -- 0:38:59
245000 -- (-10135.550) [-10116.051] (-10121.801) (-10111.843) * (-10110.667) [-10106.252] (-10100.817) (-10116.588) -- 0:38:55
Average standard deviation of split frequencies: 0.007452
246000 -- (-10114.695) [-10111.768] (-10131.371) (-10112.666) * [-10113.511] (-10111.144) (-10103.956) (-10112.706) -- 0:38:52
247000 -- (-10108.063) (-10108.122) [-10108.956] (-10114.438) * [-10106.263] (-10109.623) (-10110.141) (-10132.431) -- 0:38:49
248000 -- (-10107.011) (-10111.134) [-10112.433] (-10124.502) * (-10122.576) (-10109.494) [-10111.782] (-10117.350) -- 0:38:45
249000 -- (-10113.619) (-10109.540) [-10102.312] (-10117.139) * [-10118.033] (-10116.790) (-10109.449) (-10107.886) -- 0:38:45
250000 -- (-10119.284) (-10109.451) (-10101.189) [-10109.048] * [-10103.264] (-10110.411) (-10105.903) (-10110.943) -- 0:38:42
Average standard deviation of split frequencies: 0.007000
251000 -- (-10109.245) (-10107.633) (-10124.835) [-10112.079] * (-10112.327) (-10111.553) [-10111.306] (-10114.523) -- 0:38:38
252000 -- (-10111.645) [-10109.677] (-10105.084) (-10110.834) * [-10108.221] (-10114.557) (-10108.379) (-10101.197) -- 0:38:35
253000 -- (-10097.689) (-10109.746) (-10123.487) [-10109.924] * (-10109.811) (-10107.731) (-10113.849) [-10105.310] -- 0:38:31
254000 -- [-10102.315] (-10115.812) (-10114.781) (-10106.877) * [-10109.103] (-10106.012) (-10120.321) (-10099.697) -- 0:38:28
255000 -- [-10103.083] (-10126.720) (-10109.458) (-10117.888) * (-10119.909) (-10124.037) [-10109.837] (-10107.138) -- 0:38:25
Average standard deviation of split frequencies: 0.007161
256000 -- [-10103.256] (-10120.048) (-10114.102) (-10117.116) * [-10111.295] (-10120.024) (-10114.309) (-10099.166) -- 0:38:21
257000 -- [-10100.549] (-10107.547) (-10116.102) (-10108.136) * [-10103.639] (-10108.174) (-10128.578) (-10114.690) -- 0:38:18
258000 -- (-10108.146) (-10104.688) [-10107.361] (-10102.186) * (-10103.771) [-10109.633] (-10118.197) (-10108.661) -- 0:38:15
259000 -- [-10099.609] (-10102.370) (-10106.543) (-10121.131) * (-10118.478) (-10113.155) (-10112.368) [-10110.712] -- 0:38:14
260000 -- (-10112.161) [-10103.946] (-10111.881) (-10110.909) * [-10106.477] (-10119.919) (-10109.566) (-10105.739) -- 0:38:11
Average standard deviation of split frequencies: 0.007234
261000 -- (-10119.805) (-10113.004) [-10109.083] (-10105.036) * (-10104.040) (-10116.178) (-10126.346) [-10098.667] -- 0:38:07
262000 -- (-10102.458) [-10107.558] (-10119.100) (-10108.907) * (-10106.442) [-10104.127] (-10116.802) (-10108.215) -- 0:38:04
263000 -- (-10118.285) (-10103.717) [-10109.242] (-10116.219) * [-10101.387] (-10108.305) (-10115.644) (-10116.090) -- 0:38:01
264000 -- (-10110.783) [-10111.120] (-10106.246) (-10111.451) * (-10116.470) [-10115.836] (-10108.914) (-10111.631) -- 0:37:57
265000 -- [-10102.146] (-10111.299) (-10100.290) (-10125.489) * (-10101.092) [-10104.063] (-10115.091) (-10121.127) -- 0:37:54
Average standard deviation of split frequencies: 0.006793
266000 -- (-10113.910) (-10102.338) (-10122.100) [-10108.398] * (-10111.128) [-10106.583] (-10101.054) (-10112.780) -- 0:37:50
267000 -- [-10103.976] (-10117.916) (-10109.297) (-10104.586) * (-10109.936) (-10104.460) [-10110.144] (-10119.049) -- 0:37:50
268000 -- (-10108.184) [-10115.454] (-10105.783) (-10106.083) * (-10116.845) (-10118.443) (-10116.522) [-10102.475] -- 0:37:47
269000 -- [-10107.598] (-10116.193) (-10103.489) (-10110.142) * [-10101.442] (-10123.008) (-10113.093) (-10111.182) -- 0:37:43
270000 -- [-10101.740] (-10123.868) (-10114.076) (-10109.724) * [-10114.119] (-10113.574) (-10124.888) (-10111.361) -- 0:37:40
Average standard deviation of split frequencies: 0.006773
271000 -- (-10114.207) [-10110.812] (-10101.222) (-10107.082) * (-10130.052) [-10103.331] (-10116.939) (-10129.051) -- 0:37:36
272000 -- (-10102.407) [-10122.380] (-10112.341) (-10103.292) * (-10118.197) (-10108.050) [-10110.069] (-10114.004) -- 0:37:33
273000 -- (-10113.917) [-10108.672] (-10119.352) (-10119.212) * (-10101.530) [-10108.654] (-10113.646) (-10121.561) -- 0:37:32
274000 -- (-10112.441) (-10113.782) [-10118.538] (-10107.664) * [-10103.073] (-10113.374) (-10113.054) (-10107.281) -- 0:37:29
275000 -- [-10116.022] (-10115.233) (-10108.369) (-10109.980) * [-10104.742] (-10109.883) (-10108.427) (-10110.408) -- 0:37:26
Average standard deviation of split frequencies: 0.005883
276000 -- (-10112.888) (-10104.245) (-10105.561) [-10109.577] * (-10104.662) (-10116.030) (-10106.655) [-10107.017] -- 0:37:22
277000 -- (-10114.381) (-10114.530) (-10117.313) [-10107.825] * [-10111.365] (-10108.182) (-10106.596) (-10116.243) -- 0:37:19
278000 -- (-10112.386) (-10117.172) [-10105.669] (-10123.665) * [-10108.872] (-10102.226) (-10114.193) (-10120.851) -- 0:37:16
279000 -- (-10114.083) [-10104.109] (-10101.224) (-10104.020) * (-10115.993) (-10104.101) (-10112.296) [-10098.718] -- 0:37:12
280000 -- [-10103.129] (-10104.394) (-10115.403) (-10115.797) * (-10112.878) (-10119.381) (-10104.794) [-10108.529] -- 0:37:09
Average standard deviation of split frequencies: 0.006252
281000 -- [-10104.494] (-10117.203) (-10104.814) (-10108.388) * (-10112.887) (-10102.562) (-10108.988) [-10099.751] -- 0:37:06
282000 -- [-10101.883] (-10123.532) (-10112.206) (-10118.120) * (-10122.000) (-10096.446) [-10104.754] (-10111.016) -- 0:37:02
283000 -- (-10107.244) (-10124.914) (-10100.046) [-10112.082] * [-10114.908] (-10107.737) (-10112.370) (-10107.851) -- 0:36:59
284000 -- [-10103.003] (-10118.050) (-10104.638) (-10132.429) * [-10107.406] (-10103.995) (-10106.893) (-10112.442) -- 0:36:56
285000 -- [-10107.436] (-10117.643) (-10105.688) (-10110.970) * (-10110.238) (-10111.581) [-10106.846] (-10130.080) -- 0:36:52
Average standard deviation of split frequencies: 0.006135
286000 -- (-10113.674) [-10108.988] (-10099.453) (-10115.267) * (-10123.533) [-10110.102] (-10114.623) (-10110.540) -- 0:36:51
287000 -- (-10104.221) (-10108.569) [-10105.543] (-10117.614) * (-10117.813) (-10111.299) [-10100.051] (-10116.027) -- 0:36:48
288000 -- [-10098.462] (-10113.363) (-10105.864) (-10116.633) * (-10113.654) [-10109.154] (-10110.541) (-10100.360) -- 0:36:45
289000 -- (-10108.426) (-10104.259) [-10108.650] (-10128.741) * [-10104.035] (-10112.822) (-10113.224) (-10109.958) -- 0:36:41
290000 -- (-10115.144) (-10118.049) [-10104.670] (-10097.976) * (-10110.364) [-10111.585] (-10110.594) (-10105.883) -- 0:36:38
Average standard deviation of split frequencies: 0.005496
291000 -- (-10113.496) (-10107.529) (-10114.480) [-10102.745] * (-10112.437) (-10113.914) (-10108.736) [-10107.499] -- 0:36:35
292000 -- (-10105.569) [-10107.500] (-10114.390) (-10108.571) * (-10110.140) (-10116.716) (-10108.676) [-10102.986] -- 0:36:31
293000 -- (-10113.356) (-10112.256) [-10103.795] (-10104.244) * (-10110.860) [-10115.929] (-10105.049) (-10112.602) -- 0:36:28
294000 -- [-10105.775] (-10105.801) (-10100.763) (-10104.783) * [-10104.954] (-10108.361) (-10128.874) (-10109.303) -- 0:36:25
295000 -- (-10109.835) (-10105.362) (-10106.218) [-10103.864] * (-10127.411) (-10103.416) [-10106.556] (-10111.136) -- 0:36:21
Average standard deviation of split frequencies: 0.005397
296000 -- (-10105.700) (-10107.588) (-10104.154) [-10111.081] * (-10103.996) [-10112.977] (-10119.248) (-10107.803) -- 0:36:20
297000 -- (-10111.115) [-10098.386] (-10117.625) (-10106.864) * (-10110.308) (-10103.349) (-10121.214) [-10108.632] -- 0:36:17
298000 -- (-10111.241) (-10109.129) (-10113.809) [-10117.551] * (-10108.197) [-10106.938] (-10118.103) (-10114.139) -- 0:36:14
299000 -- (-10119.575) [-10111.941] (-10115.595) (-10112.854) * (-10112.134) (-10109.642) [-10099.541] (-10108.995) -- 0:36:10
300000 -- (-10108.671) (-10111.087) [-10107.589] (-10124.842) * (-10113.772) [-10113.257] (-10100.404) (-10115.325) -- 0:36:07
Average standard deviation of split frequencies: 0.005662
301000 -- (-10102.246) [-10115.034] (-10104.676) (-10109.010) * (-10105.119) [-10113.712] (-10102.715) (-10115.345) -- 0:36:04
302000 -- (-10120.864) (-10111.788) (-10108.105) [-10107.388] * [-10108.768] (-10109.591) (-10107.225) (-10107.061) -- 0:36:03
303000 -- (-10114.189) [-10109.453] (-10110.821) (-10113.040) * (-10109.766) (-10109.025) (-10112.577) [-10107.436] -- 0:36:00
304000 -- [-10108.091] (-10101.188) (-10121.735) (-10113.588) * (-10106.318) (-10100.854) [-10109.716] (-10115.179) -- 0:35:56
305000 -- (-10107.517) [-10106.048] (-10108.078) (-10118.650) * [-10103.214] (-10110.630) (-10105.810) (-10114.900) -- 0:35:53
Average standard deviation of split frequencies: 0.005991
306000 -- (-10112.847) (-10111.868) [-10101.845] (-10112.980) * (-10108.961) (-10112.273) [-10095.810] (-10111.390) -- 0:35:50
307000 -- (-10112.439) (-10102.733) (-10103.881) [-10098.153] * (-10111.820) (-10117.888) (-10114.278) [-10102.811] -- 0:35:46
308000 -- (-10097.865) [-10098.931] (-10112.553) (-10111.596) * (-10107.016) [-10105.357] (-10109.342) (-10110.402) -- 0:35:43
309000 -- [-10108.829] (-10102.424) (-10128.306) (-10099.234) * (-10110.258) (-10122.979) [-10103.332] (-10116.698) -- 0:35:40
310000 -- (-10118.223) (-10129.420) (-10121.880) [-10103.676] * (-10101.316) (-10107.465) [-10104.737] (-10115.590) -- 0:35:39
Average standard deviation of split frequencies: 0.005058
311000 -- [-10112.391] (-10108.197) (-10104.947) (-10116.080) * (-10110.783) (-10114.748) [-10104.966] (-10118.875) -- 0:35:35
312000 -- (-10114.428) [-10103.158] (-10110.802) (-10111.329) * [-10106.978] (-10106.497) (-10111.483) (-10104.992) -- 0:35:32
313000 -- (-10117.412) (-10113.486) (-10110.493) [-10101.473] * [-10116.001] (-10112.193) (-10098.882) (-10112.317) -- 0:35:29
314000 -- [-10103.966] (-10112.652) (-10124.083) (-10107.317) * (-10107.968) (-10112.802) [-10097.666] (-10109.918) -- 0:35:25
315000 -- (-10121.990) (-10116.875) [-10112.981] (-10111.063) * (-10107.130) [-10107.592] (-10115.783) (-10105.801) -- 0:35:22
Average standard deviation of split frequencies: 0.005387
316000 -- (-10117.504) [-10104.759] (-10099.872) (-10109.865) * (-10112.208) (-10116.145) (-10122.948) [-10114.419] -- 0:35:19
317000 -- (-10114.224) [-10102.277] (-10108.796) (-10100.824) * [-10102.875] (-10106.155) (-10101.101) (-10112.650) -- 0:35:15
318000 -- (-10116.936) (-10110.795) (-10106.319) [-10107.885] * (-10113.483) [-10105.336] (-10111.543) (-10105.612) -- 0:35:12
319000 -- (-10109.730) (-10108.858) [-10105.656] (-10108.160) * (-10114.552) (-10114.101) [-10111.446] (-10108.851) -- 0:35:11
320000 -- [-10107.792] (-10115.100) (-10123.255) (-10106.806) * (-10106.770) (-10110.794) (-10104.579) [-10104.750] -- 0:35:08
Average standard deviation of split frequencies: 0.004900
321000 -- (-10113.841) (-10111.820) [-10112.517] (-10122.718) * (-10107.414) [-10107.946] (-10114.486) (-10104.572) -- 0:35:04
322000 -- [-10105.477] (-10112.814) (-10108.483) (-10110.784) * (-10108.861) (-10110.820) [-10115.659] (-10127.034) -- 0:35:01
323000 -- [-10109.737] (-10108.003) (-10104.528) (-10110.681) * (-10105.289) (-10115.177) [-10107.646] (-10115.562) -- 0:35:00
324000 -- (-10106.012) (-10113.902) [-10105.013] (-10113.820) * [-10110.439] (-10105.896) (-10108.704) (-10107.271) -- 0:34:56
325000 -- (-10123.794) (-10114.343) (-10108.808) [-10105.916] * (-10109.237) (-10109.020) (-10114.758) [-10101.024] -- 0:34:53
Average standard deviation of split frequencies: 0.004740
326000 -- (-10112.452) (-10112.578) (-10106.357) [-10109.785] * [-10108.768] (-10124.866) (-10112.671) (-10107.218) -- 0:34:50
327000 -- (-10116.062) (-10114.041) (-10112.531) [-10108.122] * (-10104.865) [-10103.140] (-10115.467) (-10109.595) -- 0:34:48
328000 -- (-10114.698) [-10115.222] (-10131.111) (-10110.595) * [-10115.860] (-10109.547) (-10116.303) (-10107.219) -- 0:34:45
329000 -- (-10102.872) (-10112.143) [-10113.701] (-10108.252) * (-10102.634) (-10107.614) (-10119.362) [-10104.841] -- 0:34:42
330000 -- (-10113.308) (-10123.524) [-10104.415] (-10114.598) * (-10119.405) (-10110.944) [-10110.127] (-10127.614) -- 0:34:39
Average standard deviation of split frequencies: 0.004831
331000 -- (-10116.284) (-10127.305) [-10099.669] (-10115.074) * (-10104.424) [-10117.551] (-10117.242) (-10102.289) -- 0:34:35
332000 -- [-10115.374] (-10110.428) (-10111.218) (-10106.521) * [-10097.881] (-10130.393) (-10105.597) (-10125.171) -- 0:34:32
333000 -- (-10123.228) (-10119.445) (-10108.233) [-10101.724] * [-10115.830] (-10120.948) (-10109.450) (-10125.346) -- 0:34:29
334000 -- (-10107.007) [-10101.149] (-10109.292) (-10121.357) * (-10127.335) [-10111.590] (-10109.698) (-10114.482) -- 0:34:25
335000 -- (-10118.780) (-10109.548) [-10111.442] (-10113.063) * (-10119.502) [-10112.037] (-10106.947) (-10111.255) -- 0:34:22
Average standard deviation of split frequencies: 0.005066
336000 -- [-10108.580] (-10128.727) (-10101.811) (-10119.552) * (-10112.911) [-10104.102] (-10104.022) (-10103.175) -- 0:34:19
337000 -- [-10107.501] (-10114.381) (-10107.582) (-10107.423) * [-10116.730] (-10109.289) (-10107.736) (-10103.815) -- 0:34:17
338000 -- (-10113.464) [-10106.503] (-10111.850) (-10105.016) * (-10111.420) (-10115.270) (-10103.681) [-10105.334] -- 0:34:14
339000 -- (-10129.982) (-10108.190) (-10112.028) [-10113.503] * (-10097.321) [-10121.301] (-10107.156) (-10118.507) -- 0:34:11
340000 -- (-10110.511) [-10107.143] (-10111.558) (-10106.532) * [-10110.495] (-10135.073) (-10111.354) (-10114.744) -- 0:34:07
Average standard deviation of split frequencies: 0.005996
341000 -- (-10108.485) (-10128.007) [-10102.195] (-10104.788) * (-10110.181) (-10117.545) (-10113.431) [-10110.234] -- 0:34:04
342000 -- (-10103.642) [-10112.004] (-10123.469) (-10115.314) * [-10108.570] (-10108.863) (-10113.607) (-10107.537) -- 0:34:01
343000 -- (-10120.361) (-10106.440) [-10106.672] (-10125.568) * [-10100.322] (-10111.378) (-10122.130) (-10109.266) -- 0:33:58
344000 -- (-10109.649) (-10117.320) (-10115.239) [-10101.680] * (-10111.365) (-10119.949) (-10111.175) [-10109.586] -- 0:33:54
345000 -- (-10114.292) [-10099.068] (-10117.248) (-10116.775) * (-10113.750) (-10119.704) [-10115.666] (-10107.940) -- 0:33:51
Average standard deviation of split frequencies: 0.005904
346000 -- [-10105.006] (-10109.173) (-10122.863) (-10123.698) * [-10114.365] (-10113.094) (-10110.026) (-10112.780) -- 0:33:48
347000 -- (-10105.779) (-10110.657) [-10113.891] (-10122.247) * (-10117.618) (-10119.441) [-10109.112] (-10112.929) -- 0:33:44
348000 -- (-10100.501) [-10105.832] (-10121.090) (-10107.984) * (-10121.668) [-10104.306] (-10110.177) (-10103.771) -- 0:33:41
349000 -- (-10113.833) [-10106.792] (-10118.696) (-10115.337) * (-10102.950) (-10108.634) [-10104.281] (-10110.952) -- 0:33:40
350000 -- (-10109.254) (-10108.533) (-10119.413) [-10108.423] * (-10110.636) [-10103.165] (-10118.780) (-10145.565) -- 0:33:36
Average standard deviation of split frequencies: 0.005900
351000 -- (-10121.999) (-10109.687) [-10101.149] (-10117.182) * (-10110.155) (-10103.632) [-10104.898] (-10111.214) -- 0:33:33
352000 -- [-10106.121] (-10107.683) (-10113.268) (-10112.736) * (-10113.439) (-10115.667) [-10110.549] (-10114.083) -- 0:33:30
353000 -- (-10116.110) (-10101.903) [-10108.494] (-10108.460) * [-10099.419] (-10116.093) (-10111.285) (-10125.344) -- 0:33:26
354000 -- (-10138.543) (-10105.387) (-10115.774) [-10103.662] * [-10100.372] (-10113.386) (-10109.005) (-10111.426) -- 0:33:23
355000 -- (-10119.445) [-10113.109] (-10106.070) (-10117.286) * [-10108.390] (-10117.803) (-10120.556) (-10110.236) -- 0:33:20
Average standard deviation of split frequencies: 0.005444
356000 -- (-10111.226) (-10107.623) [-10113.657] (-10105.523) * (-10111.781) (-10106.506) (-10105.106) [-10114.220] -- 0:33:17
357000 -- [-10110.056] (-10121.866) (-10111.000) (-10115.528) * (-10122.199) [-10102.364] (-10110.709) (-10102.707) -- 0:33:13
358000 -- (-10111.158) (-10122.714) [-10104.777] (-10119.511) * (-10104.798) [-10104.981] (-10108.957) (-10102.020) -- 0:33:10
359000 -- (-10109.248) (-10107.378) (-10105.116) [-10114.093] * [-10099.059] (-10109.156) (-10116.199) (-10105.438) -- 0:33:07
360000 -- (-10112.451) (-10097.602) (-10116.973) [-10115.656] * (-10114.264) [-10113.491] (-10123.470) (-10107.657) -- 0:33:05
Average standard deviation of split frequencies: 0.005156
361000 -- (-10112.962) [-10105.904] (-10106.131) (-10109.212) * [-10113.563] (-10116.852) (-10109.480) (-10128.365) -- 0:33:02
362000 -- (-10109.481) (-10102.821) [-10103.370] (-10110.255) * (-10111.447) (-10120.453) (-10112.105) [-10110.807] -- 0:32:59
363000 -- [-10111.220] (-10106.019) (-10109.708) (-10098.867) * [-10108.425] (-10121.132) (-10107.420) (-10111.449) -- 0:32:55
364000 -- [-10107.294] (-10114.388) (-10114.184) (-10097.913) * [-10098.131] (-10118.229) (-10116.332) (-10107.203) -- 0:32:52
365000 -- (-10113.080) [-10102.566] (-10109.579) (-10115.460) * (-10112.842) [-10104.903] (-10113.614) (-10106.460) -- 0:32:49
Average standard deviation of split frequencies: 0.005152
366000 -- (-10112.493) (-10119.972) [-10102.799] (-10110.075) * (-10113.397) (-10111.518) (-10124.909) [-10097.292] -- 0:32:46
367000 -- (-10124.659) (-10116.556) [-10103.625] (-10103.312) * [-10103.633] (-10108.792) (-10119.828) (-10115.805) -- 0:32:42
368000 -- (-10112.136) (-10113.561) [-10114.642] (-10113.694) * (-10108.442) [-10107.310] (-10110.097) (-10110.028) -- 0:32:39
369000 -- (-10113.207) [-10103.460] (-10115.984) (-10111.770) * (-10111.200) (-10119.880) [-10104.167] (-10103.824) -- 0:32:36
370000 -- (-10114.873) (-10107.582) (-10117.177) [-10110.393] * (-10112.411) [-10118.957] (-10120.633) (-10112.164) -- 0:32:33
Average standard deviation of split frequencies: 0.005299
371000 -- (-10103.970) (-10108.639) (-10107.647) [-10103.954] * [-10099.603] (-10118.966) (-10105.577) (-10118.124) -- 0:32:29
372000 -- (-10107.731) (-10110.617) (-10111.441) [-10113.126] * (-10111.889) (-10109.788) [-10108.658] (-10114.920) -- 0:32:26
373000 -- (-10105.607) (-10124.308) [-10108.716] (-10107.866) * [-10105.602] (-10111.396) (-10119.457) (-10118.215) -- 0:32:24
374000 -- (-10119.581) (-10105.364) [-10100.179] (-10118.404) * [-10109.537] (-10107.745) (-10106.857) (-10103.155) -- 0:32:21
375000 -- (-10105.942) [-10101.793] (-10117.915) (-10124.632) * (-10111.051) (-10107.898) [-10117.547] (-10098.661) -- 0:32:18
Average standard deviation of split frequencies: 0.004876
376000 -- [-10109.440] (-10104.125) (-10105.647) (-10115.831) * (-10109.954) (-10107.801) (-10111.840) [-10099.176] -- 0:32:15
377000 -- (-10120.425) [-10112.467] (-10110.639) (-10127.920) * (-10108.429) [-10108.706] (-10116.998) (-10103.002) -- 0:32:11
378000 -- (-10114.240) (-10113.552) [-10108.305] (-10124.393) * (-10117.919) (-10114.161) (-10128.111) [-10100.456] -- 0:32:08
379000 -- (-10112.249) (-10106.005) [-10108.982] (-10113.708) * (-10107.634) [-10105.409] (-10104.276) (-10109.641) -- 0:32:05
380000 -- (-10117.138) [-10105.130] (-10117.522) (-10105.908) * (-10120.935) (-10105.008) [-10105.475] (-10114.139) -- 0:32:02
Average standard deviation of split frequencies: 0.004403
381000 -- (-10115.862) (-10123.999) (-10112.997) [-10106.079] * [-10102.001] (-10110.095) (-10114.980) (-10110.238) -- 0:32:00
382000 -- (-10110.998) (-10113.395) [-10112.206] (-10111.042) * (-10103.265) (-10112.312) [-10107.327] (-10108.368) -- 0:31:57
383000 -- (-10098.645) (-10104.465) (-10104.253) [-10121.801] * (-10102.084) [-10109.714] (-10115.915) (-10115.783) -- 0:31:53
384000 -- (-10122.364) (-10106.916) [-10099.846] (-10130.036) * [-10107.671] (-10107.568) (-10106.781) (-10107.061) -- 0:31:50
385000 -- (-10110.823) (-10115.911) (-10115.147) [-10106.442] * [-10106.160] (-10101.353) (-10117.857) (-10102.484) -- 0:31:48
Average standard deviation of split frequencies: 0.005021
386000 -- (-10096.498) (-10107.424) [-10107.169] (-10127.042) * (-10104.483) [-10096.335] (-10108.570) (-10106.170) -- 0:31:45
387000 -- [-10103.695] (-10118.113) (-10113.472) (-10121.860) * (-10116.995) (-10116.719) [-10117.591] (-10111.332) -- 0:31:43
388000 -- [-10102.998] (-10115.664) (-10113.334) (-10119.037) * (-10111.815) (-10109.404) (-10113.253) [-10103.252] -- 0:31:40
389000 -- (-10114.123) (-10114.386) [-10108.370] (-10110.673) * (-10112.223) (-10107.198) [-10115.024] (-10113.210) -- 0:31:38
390000 -- (-10117.669) (-10102.673) (-10105.969) [-10112.071] * (-10121.726) [-10112.553] (-10109.824) (-10109.256) -- 0:31:35
Average standard deviation of split frequencies: 0.005028
391000 -- (-10117.285) [-10098.267] (-10109.821) (-10110.274) * (-10116.306) (-10111.258) (-10103.984) [-10116.604] -- 0:31:32
392000 -- (-10119.197) [-10108.072] (-10111.607) (-10115.190) * (-10114.199) (-10122.850) [-10116.220] (-10111.908) -- 0:31:29
393000 -- (-10118.723) (-10111.653) [-10114.579] (-10116.349) * (-10114.945) [-10114.474] (-10117.144) (-10123.255) -- 0:31:27
394000 -- (-10112.237) (-10120.842) (-10111.093) [-10109.739] * (-10113.654) (-10116.512) (-10107.722) [-10104.820] -- 0:31:24
395000 -- (-10107.178) (-10105.541) [-10102.968] (-10107.887) * (-10112.383) (-10115.773) (-10107.714) [-10110.613] -- 0:31:20
Average standard deviation of split frequencies: 0.005158
396000 -- (-10122.206) (-10110.753) [-10107.357] (-10104.675) * (-10113.245) (-10111.103) (-10112.389) [-10110.213] -- 0:31:17
397000 -- (-10122.833) [-10119.405] (-10117.572) (-10107.321) * [-10104.036] (-10107.673) (-10110.400) (-10116.305) -- 0:31:14
398000 -- (-10121.756) [-10101.920] (-10119.815) (-10114.581) * (-10105.831) (-10103.797) (-10103.190) [-10107.072] -- 0:31:11
399000 -- (-10114.727) (-10109.413) [-10105.009] (-10107.629) * (-10107.836) (-10115.348) [-10109.233] (-10108.879) -- 0:31:07
400000 -- (-10119.720) [-10105.850] (-10105.939) (-10104.994) * (-10112.599) (-10102.651) [-10101.591] (-10108.295) -- 0:31:04
Average standard deviation of split frequencies: 0.005360
401000 -- [-10113.215] (-10105.826) (-10106.084) (-10099.186) * (-10113.985) (-10111.021) (-10102.609) [-10114.075] -- 0:31:01
402000 -- (-10110.128) (-10123.650) [-10100.333] (-10102.092) * (-10126.186) [-10111.120] (-10102.698) (-10107.013) -- 0:30:57
403000 -- (-10104.320) (-10107.577) (-10125.101) [-10104.913] * (-10102.381) (-10130.337) [-10105.549] (-10114.720) -- 0:30:54
404000 -- (-10109.399) (-10115.726) (-10117.697) [-10109.749] * (-10104.211) (-10116.237) [-10111.151] (-10119.561) -- 0:30:51
405000 -- [-10109.227] (-10115.542) (-10121.043) (-10120.158) * (-10107.521) (-10115.559) (-10126.825) [-10110.431] -- 0:30:49
Average standard deviation of split frequencies: 0.005676
406000 -- (-10113.820) (-10109.025) [-10106.307] (-10114.628) * [-10102.586] (-10120.232) (-10109.025) (-10101.914) -- 0:30:46
407000 -- (-10105.784) (-10108.647) (-10111.566) [-10112.781] * (-10114.412) [-10106.264] (-10108.803) (-10114.488) -- 0:30:43
408000 -- (-10117.351) [-10106.086] (-10108.130) (-10109.591) * [-10106.910] (-10108.439) (-10121.275) (-10106.520) -- 0:30:39
409000 -- (-10129.778) (-10116.342) [-10107.403] (-10119.548) * (-10120.145) (-10118.682) (-10112.772) [-10110.510] -- 0:30:36
410000 -- [-10115.783] (-10110.174) (-10108.454) (-10101.467) * (-10107.316) (-10119.437) [-10112.690] (-10119.644) -- 0:30:33
Average standard deviation of split frequencies: 0.005612
411000 -- (-10114.454) [-10108.670] (-10112.062) (-10122.266) * [-10109.830] (-10123.769) (-10111.366) (-10113.463) -- 0:30:30
412000 -- (-10102.595) (-10117.356) [-10114.744] (-10118.553) * [-10108.004] (-10111.119) (-10099.124) (-10114.084) -- 0:30:26
413000 -- (-10108.897) [-10102.892] (-10111.905) (-10110.479) * [-10104.129] (-10106.766) (-10104.487) (-10125.077) -- 0:30:23
414000 -- [-10115.083] (-10116.352) (-10126.422) (-10114.014) * (-10123.398) (-10108.154) [-10116.446] (-10102.176) -- 0:30:20
415000 -- (-10126.316) [-10107.991] (-10127.092) (-10108.236) * (-10115.730) (-10099.527) [-10101.891] (-10111.978) -- 0:30:17
Average standard deviation of split frequencies: 0.005729
416000 -- (-10108.327) (-10111.927) (-10115.141) [-10106.902] * (-10118.421) (-10117.594) (-10122.469) [-10102.827] -- 0:30:15
417000 -- (-10111.918) [-10105.901] (-10112.392) (-10113.686) * (-10112.009) (-10119.435) [-10103.610] (-10114.785) -- 0:30:11
418000 -- (-10115.272) [-10106.948] (-10121.370) (-10107.268) * (-10121.515) [-10106.488] (-10103.877) (-10112.359) -- 0:30:08
419000 -- (-10117.073) [-10115.898] (-10126.286) (-10112.316) * (-10113.673) (-10100.914) [-10101.917] (-10119.018) -- 0:30:05
420000 -- (-10116.498) (-10106.132) (-10101.670) [-10105.813] * [-10108.200] (-10109.377) (-10127.969) (-10125.399) -- 0:30:02
Average standard deviation of split frequencies: 0.005479
421000 -- (-10113.187) (-10113.790) [-10107.216] (-10112.249) * (-10115.431) (-10118.924) [-10110.401] (-10112.126) -- 0:29:58
422000 -- (-10109.601) (-10104.499) [-10105.255] (-10120.597) * (-10115.843) (-10114.803) (-10111.457) [-10108.274] -- 0:29:55
423000 -- (-10110.200) [-10096.192] (-10114.490) (-10107.408) * (-10114.066) (-10122.034) (-10099.729) [-10107.822] -- 0:29:52
424000 -- (-10106.537) [-10116.245] (-10103.445) (-10115.089) * (-10117.508) (-10110.293) (-10104.689) [-10108.077] -- 0:29:49
425000 -- [-10110.797] (-10120.404) (-10111.464) (-10106.988) * (-10122.009) (-10114.029) [-10102.969] (-10113.350) -- 0:29:45
Average standard deviation of split frequencies: 0.006025
426000 -- (-10125.453) (-10106.371) (-10125.269) [-10110.773] * [-10115.538] (-10109.134) (-10104.888) (-10107.267) -- 0:29:42
427000 -- (-10110.379) (-10127.031) (-10109.991) [-10106.710] * [-10109.873] (-10112.021) (-10113.715) (-10103.073) -- 0:29:39
428000 -- (-10110.736) (-10118.775) (-10109.114) [-10108.999] * (-10110.349) [-10101.673] (-10106.080) (-10108.829) -- 0:29:36
429000 -- (-10117.226) (-10109.617) [-10110.460] (-10109.050) * (-10109.581) (-10110.019) [-10109.524] (-10102.942) -- 0:29:34
430000 -- [-10106.438] (-10112.949) (-10118.421) (-10107.687) * (-10107.802) (-10112.539) [-10102.939] (-10119.621) -- 0:29:30
Average standard deviation of split frequencies: 0.006081
431000 -- (-10105.744) (-10111.289) (-10119.652) [-10106.420] * (-10112.083) [-10114.067] (-10107.278) (-10118.696) -- 0:29:27
432000 -- (-10108.987) [-10121.482] (-10119.056) (-10104.616) * (-10119.284) (-10107.950) (-10112.098) [-10105.869] -- 0:29:24
433000 -- (-10107.493) [-10114.385] (-10111.882) (-10119.388) * (-10109.534) [-10103.821] (-10124.485) (-10102.471) -- 0:29:21
434000 -- (-10116.740) (-10113.804) [-10110.796] (-10116.580) * (-10118.853) (-10109.074) (-10125.458) [-10108.929] -- 0:29:17
435000 -- (-10117.093) (-10115.989) [-10112.805] (-10110.530) * (-10117.986) (-10104.977) [-10108.062] (-10110.736) -- 0:29:14
Average standard deviation of split frequencies: 0.005166
436000 -- (-10112.224) (-10118.782) [-10105.003] (-10110.248) * (-10109.380) [-10106.414] (-10113.914) (-10103.551) -- 0:29:11
437000 -- (-10112.755) (-10108.745) [-10100.848] (-10113.930) * (-10104.948) (-10128.307) (-10120.428) [-10112.402] -- 0:29:08
438000 -- (-10116.030) (-10108.973) [-10109.478] (-10106.702) * [-10103.080] (-10113.477) (-10112.497) (-10114.757) -- 0:29:06
439000 -- (-10104.689) [-10104.144] (-10107.264) (-10118.762) * (-10125.532) (-10120.199) (-10110.753) [-10113.573] -- 0:29:03
440000 -- (-10112.573) (-10117.156) [-10104.712] (-10116.285) * (-10117.671) (-10115.120) [-10107.295] (-10115.234) -- 0:28:59
Average standard deviation of split frequencies: 0.005230
441000 -- (-10111.082) (-10113.879) (-10110.841) [-10110.484] * (-10124.126) (-10115.259) [-10116.502] (-10109.555) -- 0:28:56
442000 -- (-10107.291) (-10117.840) [-10113.937] (-10108.723) * (-10118.821) (-10132.593) [-10118.954] (-10112.403) -- 0:28:53
443000 -- (-10117.437) (-10122.151) [-10110.228] (-10109.047) * (-10115.861) [-10110.084] (-10112.746) (-10116.419) -- 0:28:50
444000 -- (-10107.920) (-10110.399) (-10113.747) [-10108.679] * (-10120.091) (-10112.477) [-10102.501] (-10113.616) -- 0:28:46
445000 -- [-10111.641] (-10119.152) (-10107.137) (-10115.200) * (-10125.434) (-10111.190) [-10107.639] (-10097.855) -- 0:28:43
Average standard deviation of split frequencies: 0.004932
446000 -- (-10107.170) (-10112.545) [-10108.884] (-10117.566) * (-10114.601) (-10121.963) (-10114.090) [-10118.770] -- 0:28:40
447000 -- (-10105.493) (-10101.968) [-10105.473] (-10109.568) * (-10109.494) (-10112.967) [-10099.242] (-10107.290) -- 0:28:37
448000 -- [-10097.564] (-10107.711) (-10110.821) (-10111.629) * (-10111.684) (-10111.167) [-10115.513] (-10109.851) -- 0:28:33
449000 -- (-10109.886) (-10102.380) [-10110.275] (-10121.289) * (-10107.887) (-10115.402) (-10118.304) [-10111.053] -- 0:28:30
450000 -- (-10116.587) (-10116.809) [-10120.346] (-10116.362) * (-10108.613) (-10113.959) (-10109.725) [-10105.876] -- 0:28:27
Average standard deviation of split frequencies: 0.004591
451000 -- (-10107.314) [-10107.457] (-10119.318) (-10117.255) * (-10107.452) (-10115.004) (-10114.125) [-10105.285] -- 0:28:24
452000 -- (-10113.595) (-10106.673) (-10104.152) [-10115.930] * (-10112.592) (-10129.038) (-10117.815) [-10102.774] -- 0:28:22
453000 -- (-10105.631) (-10116.753) [-10103.668] (-10123.079) * (-10115.203) (-10107.701) (-10108.977) [-10104.639] -- 0:28:18
454000 -- (-10109.844) (-10110.184) (-10105.055) [-10105.164] * (-10111.448) [-10109.081] (-10118.035) (-10117.289) -- 0:28:15
455000 -- (-10115.538) (-10107.890) [-10104.940] (-10106.854) * (-10115.078) (-10118.293) (-10113.394) [-10105.994] -- 0:28:12
Average standard deviation of split frequencies: 0.004480
456000 -- (-10121.286) [-10104.764] (-10113.303) (-10115.678) * (-10109.421) (-10121.656) (-10114.992) [-10107.728] -- 0:28:09
457000 -- [-10115.384] (-10112.647) (-10113.022) (-10100.317) * (-10103.158) (-10115.973) (-10103.422) [-10108.782] -- 0:28:06
458000 -- (-10116.798) (-10110.266) (-10117.990) [-10111.720] * [-10110.705] (-10113.826) (-10104.791) (-10112.659) -- 0:28:02
459000 -- (-10112.578) [-10103.667] (-10107.092) (-10122.571) * (-10119.374) (-10108.306) (-10103.212) [-10108.124] -- 0:27:59
460000 -- (-10115.819) (-10095.146) [-10109.416] (-10107.730) * [-10101.550] (-10113.030) (-10117.505) (-10117.292) -- 0:27:56
Average standard deviation of split frequencies: 0.004605
461000 -- (-10113.361) [-10110.302] (-10115.991) (-10113.776) * (-10099.628) (-10112.227) (-10117.110) [-10105.570] -- 0:27:53
462000 -- (-10109.363) (-10102.995) [-10108.082] (-10112.890) * (-10116.169) [-10100.689] (-10129.714) (-10119.955) -- 0:27:49
463000 -- (-10117.438) (-10098.975) [-10111.272] (-10113.408) * [-10112.750] (-10108.767) (-10105.727) (-10111.137) -- 0:27:46
464000 -- (-10110.624) [-10101.208] (-10117.270) (-10110.568) * [-10104.202] (-10115.569) (-10117.522) (-10116.028) -- 0:27:44
465000 -- (-10111.319) (-10109.099) (-10111.571) [-10103.204] * (-10113.028) (-10108.474) [-10109.162] (-10110.554) -- 0:27:41
Average standard deviation of split frequencies: 0.004889
466000 -- [-10099.845] (-10115.141) (-10104.536) (-10109.020) * (-10113.722) [-10108.475] (-10119.884) (-10119.383) -- 0:27:38
467000 -- (-10117.541) [-10108.909] (-10108.194) (-10108.949) * (-10108.061) [-10120.431] (-10123.066) (-10114.867) -- 0:27:34
468000 -- (-10117.560) (-10110.277) (-10119.906) [-10108.414] * [-10108.977] (-10117.663) (-10114.471) (-10121.613) -- 0:27:31
469000 -- (-10120.390) [-10093.461] (-10104.416) (-10108.680) * [-10105.824] (-10114.930) (-10109.181) (-10111.336) -- 0:27:28
470000 -- (-10108.076) [-10110.246] (-10123.706) (-10108.583) * [-10099.405] (-10111.871) (-10100.074) (-10104.276) -- 0:27:25
Average standard deviation of split frequencies: 0.004952
471000 -- [-10108.452] (-10106.355) (-10109.469) (-10115.555) * [-10107.397] (-10111.976) (-10107.983) (-10111.586) -- 0:27:22
472000 -- (-10119.651) (-10117.672) [-10108.644] (-10114.158) * (-10106.893) (-10113.119) (-10113.596) [-10119.919] -- 0:27:18
473000 -- (-10107.172) [-10101.684] (-10118.124) (-10118.621) * (-10109.663) (-10112.560) (-10116.144) [-10104.740] -- 0:27:16
474000 -- (-10110.467) (-10104.758) [-10112.107] (-10110.332) * (-10111.972) (-10109.378) [-10116.791] (-10115.969) -- 0:27:13
475000 -- (-10114.061) (-10104.932) [-10108.327] (-10114.898) * (-10113.451) (-10104.132) (-10104.778) [-10117.448] -- 0:27:10
Average standard deviation of split frequencies: 0.004897
476000 -- (-10116.262) [-10100.017] (-10111.547) (-10110.562) * (-10102.403) [-10097.325] (-10107.170) (-10118.602) -- 0:27:07
477000 -- (-10104.012) [-10118.314] (-10115.129) (-10114.845) * (-10104.106) [-10108.423] (-10112.118) (-10120.002) -- 0:27:03
478000 -- (-10112.802) (-10108.676) [-10111.384] (-10124.524) * (-10111.479) (-10113.440) (-10112.454) [-10114.602] -- 0:27:00
479000 -- (-10117.809) (-10112.627) [-10112.759] (-10123.599) * (-10111.786) (-10109.157) (-10106.090) [-10117.718] -- 0:26:57
480000 -- (-10120.244) (-10108.392) [-10109.351] (-10104.642) * (-10111.517) (-10117.490) [-10112.776] (-10119.777) -- 0:26:54
Average standard deviation of split frequencies: 0.004904
481000 -- (-10108.110) (-10100.259) [-10112.476] (-10115.406) * (-10103.261) [-10106.408] (-10111.418) (-10119.472) -- 0:26:50
482000 -- (-10112.524) (-10110.841) (-10112.414) [-10109.638] * (-10110.224) (-10106.189) [-10103.515] (-10118.420) -- 0:26:47
483000 -- (-10105.163) (-10106.839) [-10107.811] (-10112.839) * (-10112.836) (-10105.456) [-10103.244] (-10121.206) -- 0:26:44
484000 -- (-10113.207) (-10121.016) (-10108.741) [-10111.315] * (-10112.413) [-10102.956] (-10104.458) (-10116.522) -- 0:26:41
485000 -- (-10125.321) (-10120.237) [-10108.764] (-10116.969) * [-10104.368] (-10114.497) (-10117.271) (-10128.611) -- 0:26:38
Average standard deviation of split frequencies: 0.005065
486000 -- [-10114.389] (-10116.060) (-10116.429) (-10114.711) * [-10110.121] (-10102.690) (-10110.799) (-10117.347) -- 0:26:35
487000 -- [-10105.358] (-10109.727) (-10126.241) (-10111.340) * [-10100.046] (-10098.537) (-10120.912) (-10116.742) -- 0:26:32
488000 -- (-10107.833) [-10109.632] (-10116.508) (-10115.165) * (-10105.677) (-10102.543) [-10112.623] (-10114.937) -- 0:26:29
489000 -- (-10104.340) (-10108.780) (-10119.695) [-10109.018] * (-10114.001) (-10102.876) (-10103.465) [-10100.517] -- 0:26:26
490000 -- (-10117.057) (-10118.695) [-10104.888] (-10119.825) * [-10106.933] (-10124.696) (-10102.755) (-10110.067) -- 0:26:23
Average standard deviation of split frequencies: 0.005177
491000 -- (-10111.935) [-10109.207] (-10116.876) (-10108.593) * (-10105.773) [-10103.564] (-10113.243) (-10126.140) -- 0:26:19
492000 -- (-10111.089) [-10098.185] (-10104.095) (-10119.848) * (-10099.009) (-10110.281) [-10102.973] (-10122.965) -- 0:26:16
493000 -- (-10112.695) (-10107.684) [-10105.186] (-10117.130) * [-10108.144] (-10115.090) (-10112.090) (-10116.897) -- 0:26:13
494000 -- (-10106.914) (-10117.307) [-10103.725] (-10102.281) * [-10111.800] (-10110.661) (-10117.577) (-10109.673) -- 0:26:10
495000 -- [-10109.696] (-10109.680) (-10104.247) (-10109.912) * (-10115.682) (-10108.639) [-10110.055] (-10106.818) -- 0:26:07
Average standard deviation of split frequencies: 0.005227
496000 -- [-10108.588] (-10114.097) (-10110.474) (-10118.808) * [-10112.216] (-10120.884) (-10111.810) (-10112.034) -- 0:26:03
497000 -- (-10105.477) (-10122.486) [-10101.552] (-10111.621) * [-10103.353] (-10114.219) (-10112.193) (-10111.266) -- 0:26:01
498000 -- (-10117.131) (-10105.599) (-10117.040) [-10112.321] * (-10107.960) (-10107.690) (-10116.604) [-10104.684] -- 0:25:58
499000 -- (-10106.572) (-10107.791) [-10107.964] (-10106.448) * (-10116.850) (-10105.871) [-10108.454] (-10111.189) -- 0:25:55
500000 -- (-10117.880) [-10105.457] (-10120.736) (-10113.702) * (-10104.888) (-10101.682) [-10112.825] (-10124.625) -- 0:25:52
Average standard deviation of split frequencies: 0.005335
501000 -- (-10108.446) [-10116.107] (-10109.806) (-10110.035) * (-10108.848) [-10105.987] (-10119.271) (-10117.519) -- 0:25:48
502000 -- (-10116.611) (-10108.792) (-10110.844) [-10110.791] * (-10112.300) (-10105.245) (-10116.965) [-10109.054] -- 0:25:45
503000 -- (-10115.716) (-10111.159) (-10112.206) [-10106.127] * (-10106.277) (-10118.820) [-10118.331] (-10121.837) -- 0:25:42
504000 -- (-10114.315) [-10114.729] (-10125.773) (-10112.070) * (-10106.263) (-10116.494) [-10107.854] (-10110.399) -- 0:25:39
505000 -- (-10114.994) (-10126.035) (-10106.370) [-10102.901] * [-10099.684] (-10113.549) (-10112.030) (-10106.077) -- 0:25:35
Average standard deviation of split frequencies: 0.005383
506000 -- (-10111.358) (-10119.745) [-10100.223] (-10103.592) * (-10102.429) (-10118.668) (-10104.166) [-10111.508] -- 0:25:32
507000 -- (-10108.218) (-10133.238) (-10114.241) [-10112.868] * [-10109.890] (-10123.101) (-10103.294) (-10125.991) -- 0:25:29
508000 -- (-10118.070) [-10109.427] (-10109.770) (-10114.485) * (-10110.389) (-10116.095) [-10106.071] (-10121.800) -- 0:25:27
509000 -- (-10111.463) (-10121.776) (-10131.828) [-10106.201] * (-10124.953) (-10112.252) [-10104.434] (-10113.843) -- 0:25:24
510000 -- [-10110.489] (-10109.119) (-10109.096) (-10120.899) * (-10111.355) [-10108.234] (-10114.115) (-10122.014) -- 0:25:20
Average standard deviation of split frequencies: 0.005487
511000 -- (-10109.531) (-10109.316) [-10106.415] (-10114.574) * [-10105.273] (-10108.511) (-10111.196) (-10111.829) -- 0:25:17
512000 -- (-10113.588) (-10113.243) [-10099.682] (-10117.509) * (-10117.421) (-10110.524) (-10106.254) [-10109.366] -- 0:25:14
513000 -- (-10114.376) (-10114.043) [-10109.484] (-10115.419) * (-10108.445) [-10109.920] (-10114.096) (-10111.076) -- 0:25:11
514000 -- (-10112.145) (-10115.712) [-10111.033] (-10114.433) * [-10112.652] (-10107.545) (-10107.097) (-10110.051) -- 0:25:08
515000 -- (-10126.673) (-10123.784) [-10108.122] (-10113.987) * (-10105.352) [-10103.037] (-10109.668) (-10097.698) -- 0:25:04
Average standard deviation of split frequencies: 0.005481
516000 -- (-10118.334) [-10112.287] (-10109.253) (-10111.669) * (-10104.947) [-10106.482] (-10113.774) (-10114.846) -- 0:25:01
517000 -- (-10121.172) [-10116.842] (-10103.273) (-10117.238) * [-10108.564] (-10108.871) (-10105.497) (-10115.865) -- 0:24:58
518000 -- [-10105.035] (-10109.178) (-10109.035) (-10125.006) * (-10112.551) (-10118.134) (-10107.971) [-10109.282] -- 0:24:55
519000 -- [-10100.767] (-10115.906) (-10116.170) (-10119.986) * (-10114.318) (-10113.332) (-10107.787) [-10106.938] -- 0:24:53
520000 -- (-10110.896) (-10111.368) (-10119.057) [-10102.501] * [-10104.010] (-10129.173) (-10111.605) (-10096.537) -- 0:24:49
Average standard deviation of split frequencies: 0.005684
521000 -- [-10103.567] (-10113.570) (-10118.179) (-10110.920) * (-10113.171) (-10116.138) [-10108.731] (-10099.796) -- 0:24:46
522000 -- (-10106.286) (-10097.564) (-10112.738) [-10097.296] * (-10121.354) (-10115.132) (-10121.494) [-10106.410] -- 0:24:43
523000 -- (-10101.183) [-10108.148] (-10106.913) (-10117.099) * (-10117.485) (-10116.372) (-10117.572) [-10104.124] -- 0:24:40
524000 -- (-10112.885) [-10113.212] (-10105.197) (-10120.352) * [-10110.385] (-10119.905) (-10103.859) (-10112.236) -- 0:24:37
525000 -- (-10111.900) [-10109.052] (-10108.008) (-10118.395) * (-10122.488) (-10113.438) [-10104.954] (-10108.881) -- 0:24:33
Average standard deviation of split frequencies: 0.005477
526000 -- (-10107.513) [-10103.970] (-10109.609) (-10111.665) * (-10104.003) (-10103.562) (-10101.037) [-10114.119] -- 0:24:30
527000 -- (-10106.180) (-10112.007) (-10123.124) [-10104.226] * (-10113.654) [-10110.371] (-10110.967) (-10114.983) -- 0:24:27
528000 -- (-10112.441) (-10107.808) (-10113.981) [-10117.781] * (-10108.512) (-10117.541) (-10100.191) [-10110.620] -- 0:24:24
529000 -- (-10113.628) (-10124.732) [-10103.928] (-10125.293) * [-10104.342] (-10130.834) (-10104.664) (-10106.162) -- 0:24:21
530000 -- (-10101.843) [-10101.544] (-10118.829) (-10124.909) * [-10107.611] (-10112.736) (-10108.249) (-10103.083) -- 0:24:18
Average standard deviation of split frequencies: 0.005429
531000 -- (-10101.102) [-10107.406] (-10112.317) (-10126.578) * (-10108.043) (-10111.185) [-10106.576] (-10107.906) -- 0:24:15
532000 -- (-10109.189) [-10099.799] (-10110.187) (-10105.033) * (-10105.834) [-10111.052] (-10111.758) (-10109.537) -- 0:24:12
533000 -- (-10105.838) (-10120.873) [-10108.114] (-10119.173) * (-10122.202) [-10111.355] (-10108.515) (-10118.617) -- 0:24:09
534000 -- (-10112.736) (-10106.509) [-10113.068] (-10119.836) * (-10115.579) (-10114.176) [-10106.995] (-10106.751) -- 0:24:05
535000 -- (-10110.646) (-10108.485) [-10114.171] (-10125.983) * (-10107.076) (-10114.692) [-10110.529] (-10102.890) -- 0:24:02
Average standard deviation of split frequencies: 0.005619
536000 -- (-10103.719) [-10112.063] (-10117.488) (-10107.722) * [-10105.708] (-10118.154) (-10127.102) (-10103.673) -- 0:23:59
537000 -- (-10114.766) [-10104.205] (-10111.105) (-10116.493) * (-10108.897) (-10106.552) [-10107.879] (-10121.919) -- 0:23:56
538000 -- (-10107.713) [-10107.010] (-10112.396) (-10105.203) * [-10103.850] (-10118.154) (-10117.418) (-10110.635) -- 0:23:53
539000 -- (-10117.720) [-10122.440] (-10108.859) (-10101.688) * (-10098.275) (-10105.524) [-10101.740] (-10120.772) -- 0:23:50
540000 -- (-10117.984) (-10108.961) [-10097.570] (-10117.152) * (-10105.952) (-10125.160) [-10107.286] (-10106.381) -- 0:23:46
Average standard deviation of split frequencies: 0.005910
541000 -- [-10105.055] (-10109.990) (-10108.827) (-10114.332) * [-10105.841] (-10102.886) (-10118.726) (-10101.152) -- 0:23:44
542000 -- (-10116.554) [-10101.901] (-10111.284) (-10108.456) * [-10111.358] (-10104.690) (-10105.896) (-10113.196) -- 0:23:41
543000 -- [-10114.019] (-10108.721) (-10114.356) (-10110.002) * (-10111.206) (-10119.878) [-10101.428] (-10112.816) -- 0:23:38
544000 -- [-10108.017] (-10100.332) (-10125.650) (-10115.145) * (-10111.385) (-10120.328) (-10102.207) [-10102.357] -- 0:23:34
545000 -- (-10126.053) (-10112.018) (-10115.488) [-10106.761] * [-10109.213] (-10106.366) (-10120.601) (-10111.965) -- 0:23:31
Average standard deviation of split frequencies: 0.005468
546000 -- [-10112.460] (-10115.776) (-10113.831) (-10113.546) * (-10129.015) [-10106.150] (-10115.278) (-10111.267) -- 0:23:28
547000 -- (-10111.952) (-10120.550) [-10108.175] (-10114.755) * (-10109.485) (-10103.437) (-10110.613) [-10113.298] -- 0:23:25
548000 -- [-10112.907] (-10114.182) (-10104.369) (-10117.328) * (-10111.083) [-10104.066] (-10113.144) (-10111.440) -- 0:23:22
549000 -- (-10108.925) [-10102.868] (-10102.730) (-10107.894) * (-10111.735) (-10113.847) (-10114.478) [-10103.673] -- 0:23:19
550000 -- (-10106.903) [-10102.978] (-10112.741) (-10111.962) * [-10107.501] (-10104.777) (-10110.969) (-10106.894) -- 0:23:16
Average standard deviation of split frequencies: 0.005327
551000 -- (-10118.023) (-10118.400) (-10105.240) [-10112.452] * (-10104.749) (-10112.934) (-10117.507) [-10101.001] -- 0:23:13
552000 -- (-10113.483) (-10110.974) (-10112.219) [-10110.157] * (-10121.552) (-10111.299) (-10145.642) [-10116.776] -- 0:23:10
553000 -- [-10110.005] (-10112.139) (-10107.476) (-10122.104) * (-10110.962) [-10111.004] (-10122.119) (-10115.849) -- 0:23:07
554000 -- (-10102.911) (-10112.738) (-10111.426) [-10101.878] * (-10108.671) [-10100.610] (-10105.547) (-10124.278) -- 0:23:03
555000 -- (-10119.995) [-10104.395] (-10111.823) (-10115.046) * [-10117.301] (-10103.175) (-10115.054) (-10114.095) -- 0:23:00
Average standard deviation of split frequencies: 0.005935
556000 -- (-10110.094) [-10113.916] (-10120.984) (-10116.077) * (-10114.837) [-10103.272] (-10113.111) (-10106.682) -- 0:22:57
557000 -- [-10114.343] (-10115.882) (-10109.374) (-10127.547) * [-10102.089] (-10115.069) (-10108.695) (-10103.584) -- 0:22:54
558000 -- (-10111.689) (-10125.475) (-10110.299) [-10119.553] * (-10113.346) (-10103.560) [-10109.021] (-10111.545) -- 0:22:51
559000 -- (-10112.103) [-10105.723] (-10109.063) (-10108.595) * [-10102.933] (-10105.707) (-10121.462) (-10110.883) -- 0:22:47
560000 -- (-10113.135) [-10099.463] (-10094.743) (-10103.006) * (-10106.338) (-10112.628) [-10105.858] (-10114.674) -- 0:22:44
Average standard deviation of split frequencies: 0.005605
561000 -- (-10105.000) (-10120.755) (-10112.217) [-10108.271] * (-10107.221) [-10100.578] (-10105.470) (-10126.528) -- 0:22:42
562000 -- (-10102.478) (-10104.871) (-10119.664) [-10110.215] * (-10101.207) (-10100.451) (-10119.037) [-10112.971] -- 0:22:39
563000 -- (-10106.838) [-10113.710] (-10120.999) (-10115.095) * [-10111.461] (-10117.825) (-10116.415) (-10111.361) -- 0:22:36
564000 -- (-10108.694) [-10109.228] (-10115.013) (-10109.015) * (-10115.900) [-10113.327] (-10108.119) (-10133.308) -- 0:22:32
565000 -- [-10119.881] (-10106.272) (-10119.434) (-10107.079) * (-10107.432) [-10100.213] (-10099.674) (-10135.858) -- 0:22:29
Average standard deviation of split frequencies: 0.005367
566000 -- (-10110.280) (-10115.807) (-10131.150) [-10117.181] * (-10114.344) (-10100.048) (-10101.244) [-10111.270] -- 0:22:26
567000 -- (-10111.709) (-10105.932) (-10116.532) [-10118.461] * (-10110.776) (-10115.385) (-10117.424) [-10102.986] -- 0:22:23
568000 -- (-10130.879) (-10108.213) (-10108.771) [-10101.263] * (-10109.982) (-10109.464) [-10105.030] (-10103.009) -- 0:22:20
569000 -- (-10109.716) [-10101.300] (-10106.740) (-10106.148) * (-10122.917) (-10103.342) [-10106.135] (-10114.381) -- 0:22:16
570000 -- (-10114.449) (-10111.865) [-10109.205] (-10109.726) * [-10106.856] (-10114.821) (-10115.851) (-10110.563) -- 0:22:13
Average standard deviation of split frequencies: 0.005323
571000 -- [-10109.577] (-10106.571) (-10109.821) (-10120.815) * (-10103.090) (-10110.705) (-10105.919) [-10111.465] -- 0:22:10
572000 -- (-10108.246) [-10105.531] (-10109.094) (-10121.923) * [-10106.413] (-10113.112) (-10106.752) (-10105.574) -- 0:22:08
573000 -- (-10113.660) [-10115.079] (-10115.442) (-10103.405) * (-10102.849) (-10102.761) (-10111.504) [-10102.682] -- 0:22:04
574000 -- [-10108.557] (-10113.813) (-10113.419) (-10111.519) * (-10111.555) [-10108.917] (-10110.141) (-10123.823) -- 0:22:01
575000 -- (-10116.518) (-10105.062) [-10105.004] (-10109.421) * (-10102.797) (-10104.653) [-10105.756] (-10128.486) -- 0:21:58
Average standard deviation of split frequencies: 0.005092
576000 -- (-10115.995) (-10113.497) (-10109.299) [-10105.222] * (-10113.139) (-10114.384) [-10106.736] (-10110.216) -- 0:21:55
577000 -- [-10111.558] (-10108.456) (-10102.409) (-10112.642) * (-10113.224) (-10110.335) [-10102.183] (-10106.799) -- 0:21:52
578000 -- (-10115.273) (-10111.609) [-10105.805] (-10119.561) * (-10112.338) [-10111.297] (-10109.401) (-10120.990) -- 0:21:49
579000 -- (-10115.362) (-10113.504) (-10111.347) [-10102.983] * [-10107.645] (-10107.439) (-10110.548) (-10120.604) -- 0:21:45
580000 -- (-10111.723) (-10101.842) [-10103.124] (-10118.840) * [-10099.008] (-10121.987) (-10110.706) (-10114.304) -- 0:21:42
Average standard deviation of split frequencies: 0.005367
581000 -- (-10111.767) (-10108.350) [-10114.813] (-10117.094) * (-10107.076) (-10112.389) (-10102.322) [-10105.167] -- 0:21:39
582000 -- (-10104.276) (-10115.953) [-10115.093] (-10113.592) * (-10109.406) [-10113.571] (-10110.501) (-10110.795) -- 0:21:37
583000 -- [-10105.603] (-10108.870) (-10113.313) (-10100.217) * (-10114.771) (-10114.470) [-10114.200] (-10123.080) -- 0:21:33
584000 -- (-10111.251) (-10107.110) [-10100.258] (-10106.014) * (-10107.233) [-10101.960] (-10120.490) (-10116.690) -- 0:21:30
585000 -- (-10108.199) (-10111.358) (-10107.835) [-10102.125] * [-10104.725] (-10110.188) (-10127.975) (-10108.336) -- 0:21:27
Average standard deviation of split frequencies: 0.005765
586000 -- (-10111.590) (-10125.036) [-10102.959] (-10106.428) * (-10106.817) (-10110.046) (-10111.327) [-10115.616] -- 0:21:24
587000 -- (-10120.444) (-10102.385) [-10109.949] (-10111.835) * (-10113.425) (-10122.014) (-10105.727) [-10105.048] -- 0:21:21
588000 -- (-10111.785) (-10110.176) [-10106.388] (-10107.063) * (-10106.246) [-10109.721] (-10107.926) (-10118.040) -- 0:21:18
589000 -- (-10114.528) (-10116.535) (-10113.054) [-10108.780] * (-10108.042) [-10116.708] (-10110.841) (-10112.280) -- 0:21:14
590000 -- (-10111.731) (-10123.813) (-10104.001) [-10113.995] * [-10107.403] (-10102.369) (-10114.560) (-10116.954) -- 0:21:11
Average standard deviation of split frequencies: 0.006340
591000 -- (-10118.405) (-10111.664) (-10117.961) [-10102.582] * (-10111.503) (-10112.082) [-10117.238] (-10122.834) -- 0:21:08
592000 -- [-10111.113] (-10112.920) (-10100.064) (-10121.212) * (-10101.022) (-10116.421) (-10128.142) [-10104.446] -- 0:21:05
593000 -- (-10102.796) (-10115.941) [-10101.520] (-10115.327) * (-10108.171) [-10117.294] (-10120.494) (-10108.537) -- 0:21:02
594000 -- (-10120.581) (-10110.137) [-10102.628] (-10112.017) * (-10118.314) (-10116.218) [-10115.408] (-10110.554) -- 0:20:59
595000 -- [-10103.737] (-10109.306) (-10106.628) (-10109.086) * (-10115.993) [-10106.371] (-10104.450) (-10101.540) -- 0:20:56
Average standard deviation of split frequencies: 0.006503
596000 -- [-10103.302] (-10101.695) (-10104.622) (-10114.341) * (-10119.277) (-10111.512) (-10108.894) [-10109.866] -- 0:20:53
597000 -- (-10104.103) [-10114.840] (-10112.514) (-10125.858) * (-10111.807) (-10116.905) (-10108.712) [-10103.499] -- 0:20:50
598000 -- [-10112.450] (-10125.430) (-10104.601) (-10107.927) * (-10108.761) (-10111.729) [-10102.694] (-10111.522) -- 0:20:47
599000 -- (-10120.714) [-10109.705] (-10112.366) (-10108.078) * [-10110.361] (-10104.939) (-10115.007) (-10116.661) -- 0:20:43
600000 -- (-10112.080) (-10106.494) (-10121.302) [-10108.276] * (-10106.821) (-10104.881) (-10112.277) [-10113.657] -- 0:20:40
Average standard deviation of split frequencies: 0.006976
601000 -- [-10110.032] (-10118.328) (-10103.392) (-10111.621) * (-10110.867) (-10107.231) (-10124.308) [-10102.704] -- 0:20:37
602000 -- (-10110.536) [-10110.516] (-10105.518) (-10110.390) * (-10116.858) (-10101.669) [-10100.149] (-10120.080) -- 0:20:34
603000 -- [-10105.086] (-10119.114) (-10106.913) (-10108.643) * (-10116.387) (-10107.924) (-10118.606) [-10117.340] -- 0:20:31
604000 -- (-10117.584) (-10110.691) (-10105.102) [-10111.198] * [-10110.627] (-10109.214) (-10102.678) (-10114.163) -- 0:20:28
605000 -- (-10114.891) [-10105.119] (-10113.525) (-10116.551) * (-10111.968) [-10104.543] (-10108.483) (-10105.329) -- 0:20:25
Average standard deviation of split frequencies: 0.006958
606000 -- [-10118.256] (-10121.670) (-10120.017) (-10098.939) * (-10111.529) [-10100.151] (-10117.356) (-10109.325) -- 0:20:22
607000 -- (-10120.265) (-10105.937) (-10123.651) [-10112.764] * (-10111.254) (-10108.739) (-10111.650) [-10103.834] -- 0:20:19
608000 -- (-10111.824) [-10100.727] (-10128.727) (-10128.096) * (-10118.123) [-10105.816] (-10113.986) (-10101.838) -- 0:20:15
609000 -- [-10108.295] (-10108.517) (-10123.678) (-10108.220) * (-10107.510) (-10111.457) [-10109.665] (-10108.596) -- 0:20:12
610000 -- (-10103.854) [-10102.443] (-10105.645) (-10105.509) * (-10123.343) [-10109.988] (-10109.044) (-10109.300) -- 0:20:09
Average standard deviation of split frequencies: 0.006733
611000 -- (-10113.314) [-10105.646] (-10107.648) (-10120.576) * (-10117.668) (-10103.189) [-10106.086] (-10118.827) -- 0:20:06
612000 -- (-10103.277) [-10113.777] (-10110.049) (-10115.312) * (-10118.728) (-10104.430) (-10115.535) [-10108.637] -- 0:20:03
613000 -- [-10098.377] (-10117.967) (-10105.033) (-10108.995) * (-10127.345) (-10107.584) (-10107.891) [-10096.288] -- 0:20:00
614000 -- [-10106.253] (-10114.311) (-10107.429) (-10117.831) * (-10117.819) [-10107.534] (-10116.076) (-10110.412) -- 0:19:56
615000 -- (-10116.859) (-10122.184) (-10112.641) [-10114.624] * (-10111.418) [-10109.523] (-10103.847) (-10112.218) -- 0:19:53
Average standard deviation of split frequencies: 0.006420
616000 -- [-10099.470] (-10109.297) (-10106.495) (-10110.371) * [-10109.697] (-10107.927) (-10105.128) (-10112.023) -- 0:19:51
617000 -- [-10095.492] (-10109.189) (-10118.527) (-10117.783) * [-10107.142] (-10110.763) (-10098.361) (-10109.345) -- 0:19:48
618000 -- [-10099.479] (-10103.133) (-10118.308) (-10111.441) * (-10112.390) (-10100.825) (-10107.321) [-10109.457] -- 0:19:44
619000 -- [-10103.410] (-10115.228) (-10113.616) (-10125.914) * [-10109.225] (-10101.952) (-10115.871) (-10101.604) -- 0:19:41
620000 -- (-10126.017) [-10115.121] (-10110.838) (-10104.967) * (-10131.955) (-10113.330) (-10119.275) [-10116.407] -- 0:19:38
Average standard deviation of split frequencies: 0.006414
621000 -- (-10109.420) (-10111.989) (-10104.254) [-10103.613] * (-10113.175) [-10121.520] (-10114.506) (-10106.420) -- 0:19:35
622000 -- (-10102.048) (-10113.425) (-10097.770) [-10107.702] * (-10109.534) (-10114.153) [-10098.071] (-10105.298) -- 0:19:32
623000 -- (-10112.421) [-10102.559] (-10107.005) (-10109.439) * (-10114.343) [-10100.699] (-10118.415) (-10099.155) -- 0:19:29
624000 -- (-10112.696) [-10101.547] (-10121.073) (-10115.616) * (-10110.279) [-10105.256] (-10106.457) (-10109.703) -- 0:19:25
625000 -- (-10117.820) (-10112.648) [-10104.235] (-10119.684) * (-10114.299) (-10113.647) (-10105.208) [-10102.848] -- 0:19:22
Average standard deviation of split frequencies: 0.006401
626000 -- [-10108.477] (-10111.342) (-10120.209) (-10113.699) * (-10119.619) (-10125.651) (-10108.381) [-10102.179] -- 0:19:19
627000 -- (-10117.165) (-10120.619) (-10113.123) [-10102.774] * (-10102.358) (-10107.344) [-10120.281] (-10103.787) -- 0:19:16
628000 -- (-10115.017) [-10106.502] (-10113.401) (-10111.564) * (-10105.317) (-10113.236) (-10108.838) [-10105.193] -- 0:19:13
629000 -- (-10118.692) [-10113.887] (-10100.065) (-10111.603) * [-10097.740] (-10110.170) (-10115.624) (-10107.480) -- 0:19:10
630000 -- (-10119.230) (-10114.164) [-10106.309] (-10130.345) * [-10112.062] (-10113.362) (-10114.244) (-10111.142) -- 0:19:07
Average standard deviation of split frequencies: 0.006561
631000 -- (-10113.301) (-10114.608) [-10106.119] (-10108.934) * (-10124.547) (-10110.181) (-10105.347) [-10114.790] -- 0:19:04
632000 -- (-10104.638) [-10117.105] (-10112.368) (-10114.767) * (-10123.009) (-10107.425) [-10099.343] (-10109.466) -- 0:19:01
633000 -- [-10107.616] (-10105.681) (-10118.234) (-10106.499) * (-10107.998) (-10102.156) [-10113.340] (-10107.115) -- 0:18:58
634000 -- [-10097.539] (-10114.428) (-10109.278) (-10119.055) * (-10115.625) (-10113.296) [-10104.694] (-10105.590) -- 0:18:54
635000 -- [-10109.244] (-10109.469) (-10117.546) (-10114.730) * [-10109.630] (-10108.540) (-10117.355) (-10111.592) -- 0:18:51
Average standard deviation of split frequencies: 0.006588
636000 -- (-10122.514) (-10105.681) [-10104.997] (-10106.633) * [-10098.439] (-10104.815) (-10109.292) (-10108.912) -- 0:18:48
637000 -- (-10116.858) [-10117.862] (-10110.447) (-10105.101) * (-10115.558) (-10109.547) [-10108.162] (-10121.041) -- 0:18:45
638000 -- (-10119.458) [-10109.840] (-10110.504) (-10101.828) * [-10107.642] (-10116.413) (-10110.746) (-10108.564) -- 0:18:42
639000 -- (-10116.138) (-10102.663) [-10103.510] (-10111.805) * [-10107.152] (-10105.532) (-10109.995) (-10120.683) -- 0:18:39
640000 -- (-10112.110) (-10112.678) [-10108.391] (-10117.391) * (-10106.011) (-10119.295) [-10101.847] (-10106.600) -- 0:18:36
Average standard deviation of split frequencies: 0.006786
641000 -- (-10129.079) [-10109.723] (-10104.638) (-10114.107) * (-10116.953) [-10103.030] (-10113.943) (-10108.245) -- 0:18:33
642000 -- (-10112.478) (-10113.826) (-10115.339) [-10109.926] * (-10110.983) (-10109.406) [-10115.977] (-10109.315) -- 0:18:30
643000 -- (-10106.316) (-10110.355) [-10107.566] (-10108.946) * (-10108.655) [-10102.308] (-10110.783) (-10105.007) -- 0:18:27
644000 -- (-10107.757) (-10103.278) [-10111.118] (-10111.703) * [-10107.440] (-10107.657) (-10119.806) (-10108.274) -- 0:18:23
645000 -- (-10105.587) (-10107.572) [-10110.752] (-10109.437) * (-10108.653) [-10116.921] (-10124.909) (-10106.859) -- 0:18:20
Average standard deviation of split frequencies: 0.006973
646000 -- [-10106.966] (-10123.307) (-10105.840) (-10114.239) * (-10110.781) (-10121.188) [-10106.407] (-10103.169) -- 0:18:17
647000 -- (-10110.407) (-10113.537) [-10109.103] (-10109.982) * (-10109.487) (-10111.846) [-10109.620] (-10114.874) -- 0:18:14
648000 -- (-10108.362) [-10107.935] (-10112.458) (-10126.544) * (-10109.057) (-10107.318) [-10110.457] (-10117.183) -- 0:18:11
649000 -- (-10112.595) (-10111.427) (-10108.234) [-10111.491] * (-10109.796) (-10114.067) (-10135.194) [-10113.853] -- 0:18:08
650000 -- (-10111.833) (-10114.158) [-10109.979] (-10122.038) * (-10117.883) [-10112.825] (-10106.717) (-10108.294) -- 0:18:05
Average standard deviation of split frequencies: 0.006923
651000 -- (-10119.449) [-10105.792] (-10129.276) (-10106.398) * (-10122.678) (-10114.037) (-10114.156) [-10100.478] -- 0:18:01
652000 -- [-10101.540] (-10099.630) (-10108.864) (-10111.018) * (-10123.325) [-10120.337] (-10114.999) (-10117.775) -- 0:17:58
653000 -- [-10108.208] (-10107.304) (-10120.832) (-10104.832) * (-10119.102) (-10121.120) [-10117.433] (-10121.914) -- 0:17:56
654000 -- (-10112.568) (-10115.899) (-10115.538) [-10103.278] * (-10129.038) [-10111.584] (-10114.498) (-10110.974) -- 0:17:52
655000 -- (-10113.815) (-10116.128) [-10111.507] (-10116.709) * (-10121.378) [-10104.302] (-10106.110) (-10115.125) -- 0:17:49
Average standard deviation of split frequencies: 0.006268
656000 -- [-10103.131] (-10123.523) (-10108.618) (-10108.641) * (-10119.089) [-10111.006] (-10103.360) (-10112.930) -- 0:17:46
657000 -- [-10108.951] (-10124.994) (-10119.799) (-10118.769) * (-10113.003) (-10124.076) (-10118.926) [-10109.187] -- 0:17:43
658000 -- (-10119.841) (-10118.192) (-10103.946) [-10099.979] * (-10108.466) (-10120.097) (-10110.643) [-10109.184] -- 0:17:40
659000 -- (-10113.485) (-10142.574) (-10110.594) [-10107.682] * (-10118.273) [-10100.825] (-10114.073) (-10115.154) -- 0:17:37
660000 -- (-10117.539) (-10122.817) (-10113.561) [-10105.300] * (-10113.402) [-10110.683] (-10108.909) (-10112.708) -- 0:17:34
Average standard deviation of split frequencies: 0.006025
661000 -- (-10117.633) (-10125.706) [-10101.974] (-10117.191) * (-10112.890) (-10116.109) (-10108.746) [-10110.346] -- 0:17:30
662000 -- (-10106.813) (-10126.382) (-10112.710) [-10113.882] * (-10119.839) (-10116.181) [-10105.811] (-10109.928) -- 0:17:27
663000 -- (-10109.794) (-10114.387) (-10101.460) [-10104.661] * [-10099.079] (-10111.169) (-10112.166) (-10119.305) -- 0:17:25
664000 -- (-10115.060) [-10108.752] (-10114.069) (-10107.189) * (-10118.451) [-10106.564] (-10123.898) (-10102.380) -- 0:17:21
665000 -- [-10113.008] (-10117.698) (-10116.440) (-10119.924) * (-10107.133) [-10121.465] (-10114.234) (-10111.998) -- 0:17:18
Average standard deviation of split frequencies: 0.005741
666000 -- (-10115.155) (-10110.045) (-10102.528) [-10101.899] * (-10106.578) (-10111.215) (-10123.255) [-10112.880] -- 0:17:15
667000 -- [-10099.368] (-10104.022) (-10116.540) (-10107.816) * (-10118.109) (-10103.318) [-10112.113] (-10115.876) -- 0:17:12
668000 -- (-10105.803) [-10103.992] (-10113.211) (-10107.501) * [-10111.434] (-10111.511) (-10111.146) (-10107.342) -- 0:17:09
669000 -- (-10110.640) [-10107.548] (-10117.350) (-10097.229) * (-10116.266) (-10111.715) (-10118.840) [-10107.660] -- 0:17:06
670000 -- (-10121.581) [-10106.273] (-10111.642) (-10102.649) * (-10117.056) [-10100.579] (-10111.086) (-10124.157) -- 0:17:03
Average standard deviation of split frequencies: 0.005623
671000 -- (-10103.204) [-10106.369] (-10109.085) (-10107.185) * (-10106.587) (-10122.370) (-10128.611) [-10108.309] -- 0:16:59
672000 -- (-10122.304) [-10116.032] (-10113.308) (-10110.211) * (-10113.545) (-10107.231) [-10108.063] (-10122.932) -- 0:16:56
673000 -- (-10105.041) (-10114.232) [-10104.652] (-10110.366) * (-10107.426) (-10129.356) [-10100.787] (-10113.411) -- 0:16:53
674000 -- [-10101.762] (-10107.722) (-10110.031) (-10121.916) * (-10118.760) (-10108.809) [-10111.157] (-10109.386) -- 0:16:50
675000 -- (-10102.014) [-10112.039] (-10110.269) (-10111.635) * (-10120.254) (-10100.991) [-10104.090] (-10111.114) -- 0:16:47
Average standard deviation of split frequencies: 0.005501
676000 -- (-10107.823) (-10105.908) (-10118.848) [-10106.127] * (-10105.650) (-10115.658) (-10112.929) [-10109.018] -- 0:16:44
677000 -- (-10109.605) (-10111.981) (-10099.374) [-10103.025] * (-10115.601) [-10109.064] (-10112.266) (-10100.054) -- 0:16:41
678000 -- (-10113.106) (-10122.286) (-10111.367) [-10096.463] * (-10104.640) (-10103.779) (-10115.531) [-10102.906] -- 0:16:38
679000 -- [-10095.906] (-10123.087) (-10111.504) (-10106.783) * (-10110.667) (-10114.414) [-10110.276] (-10112.346) -- 0:16:35
680000 -- (-10109.966) (-10124.175) (-10109.932) [-10108.499] * (-10107.913) [-10110.353] (-10115.256) (-10109.915) -- 0:16:32
Average standard deviation of split frequencies: 0.005464
681000 -- (-10117.709) (-10117.747) [-10110.356] (-10109.449) * (-10104.686) (-10112.254) [-10102.278] (-10135.381) -- 0:16:28
682000 -- [-10107.568] (-10121.808) (-10121.851) (-10099.003) * [-10100.845] (-10111.938) (-10112.445) (-10115.231) -- 0:16:25
683000 -- (-10125.576) (-10110.057) (-10114.717) [-10106.710] * [-10097.880] (-10105.958) (-10112.275) (-10109.081) -- 0:16:23
684000 -- [-10096.031] (-10113.866) (-10122.312) (-10110.711) * (-10117.736) [-10107.385] (-10107.545) (-10101.680) -- 0:16:19
685000 -- (-10113.961) (-10123.122) [-10119.097] (-10116.557) * [-10110.887] (-10117.581) (-10110.237) (-10112.321) -- 0:16:16
Average standard deviation of split frequencies: 0.005383
686000 -- (-10112.393) (-10116.199) [-10118.867] (-10119.032) * (-10115.776) (-10111.760) [-10100.035] (-10108.070) -- 0:16:13
687000 -- (-10102.362) [-10107.006] (-10118.907) (-10123.499) * (-10118.943) (-10121.030) (-10113.535) [-10109.027] -- 0:16:10
688000 -- [-10114.863] (-10114.203) (-10108.812) (-10119.424) * (-10107.678) (-10115.997) (-10120.724) [-10108.792] -- 0:16:07
689000 -- (-10108.730) [-10105.194] (-10107.322) (-10116.160) * (-10105.106) (-10121.622) [-10109.783] (-10119.709) -- 0:16:04
690000 -- (-10106.714) (-10109.912) [-10103.448] (-10108.400) * (-10101.259) (-10122.818) (-10106.657) [-10106.421] -- 0:16:01
Average standard deviation of split frequencies: 0.005347
691000 -- (-10111.865) (-10113.260) [-10107.854] (-10104.583) * [-10104.214] (-10116.576) (-10115.976) (-10108.910) -- 0:15:58
692000 -- (-10121.973) (-10113.544) [-10101.242] (-10105.636) * [-10104.283] (-10107.190) (-10112.374) (-10112.562) -- 0:15:55
693000 -- (-10114.132) [-10118.928] (-10107.113) (-10111.604) * [-10105.952] (-10111.122) (-10112.053) (-10116.338) -- 0:15:52
694000 -- (-10115.037) [-10109.174] (-10106.679) (-10101.147) * (-10118.947) [-10109.123] (-10114.209) (-10106.903) -- 0:15:48
695000 -- (-10121.417) (-10118.212) (-10106.331) [-10108.812] * (-10120.436) (-10104.186) [-10101.807] (-10113.027) -- 0:15:45
Average standard deviation of split frequencies: 0.005080
696000 -- (-10114.701) [-10107.125] (-10129.482) (-10116.484) * (-10117.376) (-10104.259) [-10096.672] (-10109.800) -- 0:15:42
697000 -- (-10108.967) (-10113.072) (-10124.913) [-10111.271] * (-10112.929) [-10111.668] (-10116.547) (-10110.760) -- 0:15:39
698000 -- (-10116.695) (-10111.850) [-10108.959] (-10110.113) * (-10110.647) (-10106.634) (-10109.509) [-10115.604] -- 0:15:36
699000 -- (-10110.797) (-10106.879) (-10105.850) [-10113.672] * (-10117.896) (-10108.076) (-10117.429) [-10114.081] -- 0:15:33
700000 -- (-10110.490) (-10114.240) (-10117.346) [-10108.171] * (-10109.509) [-10105.228] (-10106.303) (-10115.333) -- 0:15:30
Average standard deviation of split frequencies: 0.004859
701000 -- (-10113.036) (-10109.833) [-10106.339] (-10110.266) * (-10103.348) (-10115.657) [-10100.685] (-10106.296) -- 0:15:26
702000 -- (-10112.258) (-10110.482) (-10103.313) [-10120.083] * (-10111.596) (-10111.031) [-10100.297] (-10116.728) -- 0:15:24
703000 -- [-10113.906] (-10108.565) (-10100.972) (-10112.373) * [-10113.824] (-10120.127) (-10117.032) (-10117.819) -- 0:15:20
704000 -- (-10103.765) (-10108.498) [-10100.523] (-10115.901) * (-10109.674) (-10110.868) [-10106.018] (-10112.127) -- 0:15:17
705000 -- [-10108.483] (-10114.906) (-10108.667) (-10117.142) * (-10115.566) [-10116.696] (-10115.686) (-10110.497) -- 0:15:14
Average standard deviation of split frequencies: 0.005082
706000 -- (-10103.245) [-10107.359] (-10109.264) (-10108.529) * (-10102.847) (-10109.616) [-10114.543] (-10119.312) -- 0:15:11
707000 -- (-10121.788) [-10109.401] (-10124.483) (-10120.012) * (-10103.117) [-10107.997] (-10109.109) (-10127.943) -- 0:15:08
708000 -- (-10110.924) [-10107.547] (-10116.765) (-10111.874) * (-10104.906) [-10100.125] (-10111.179) (-10128.739) -- 0:15:05
709000 -- (-10123.205) (-10109.172) (-10107.462) [-10103.633] * (-10103.299) (-10112.544) (-10113.964) [-10106.787] -- 0:15:02
710000 -- (-10116.465) (-10106.905) (-10109.486) [-10102.046] * [-10110.814] (-10114.164) (-10113.234) (-10109.361) -- 0:14:59
Average standard deviation of split frequencies: 0.005159
711000 -- (-10112.147) (-10115.276) (-10113.601) [-10110.377] * (-10113.435) [-10114.055] (-10128.886) (-10108.842) -- 0:14:56
712000 -- (-10118.670) [-10102.273] (-10105.583) (-10118.111) * [-10106.321] (-10100.899) (-10121.383) (-10126.850) -- 0:14:53
713000 -- (-10107.111) (-10120.261) (-10103.824) [-10100.082] * (-10110.438) (-10112.342) [-10113.440] (-10115.991) -- 0:14:49
714000 -- (-10104.626) (-10107.379) (-10104.042) [-10108.599] * (-10111.348) (-10104.938) [-10123.840] (-10118.427) -- 0:14:46
715000 -- (-10121.434) [-10112.309] (-10114.627) (-10115.300) * (-10108.610) [-10101.311] (-10110.326) (-10115.550) -- 0:14:43
Average standard deviation of split frequencies: 0.005157
716000 -- [-10111.087] (-10111.378) (-10111.614) (-10117.505) * (-10111.375) (-10123.525) (-10114.934) [-10115.399] -- 0:14:40
717000 -- (-10112.377) (-10117.843) [-10106.735] (-10112.591) * (-10108.068) [-10109.104] (-10110.124) (-10116.609) -- 0:14:37
718000 -- (-10113.166) [-10104.193] (-10107.471) (-10105.904) * (-10102.329) [-10109.837] (-10119.592) (-10109.014) -- 0:14:34
719000 -- (-10121.129) [-10112.864] (-10108.643) (-10109.149) * (-10114.771) (-10121.530) [-10107.057] (-10121.430) -- 0:14:31
720000 -- (-10101.285) (-10109.104) [-10116.110] (-10117.248) * [-10102.453] (-10107.083) (-10106.795) (-10115.084) -- 0:14:28
Average standard deviation of split frequencies: 0.005160
721000 -- [-10102.781] (-10105.637) (-10111.980) (-10101.496) * (-10118.333) (-10120.607) (-10109.581) [-10101.295] -- 0:14:25
722000 -- (-10110.717) (-10115.178) [-10105.258] (-10114.583) * (-10110.578) (-10102.122) [-10105.143] (-10100.282) -- 0:14:22
723000 -- (-10114.095) (-10104.318) [-10108.873] (-10103.412) * (-10113.551) [-10110.658] (-10116.416) (-10101.078) -- 0:14:18
724000 -- (-10108.411) [-10109.123] (-10117.010) (-10099.613) * (-10111.304) (-10117.029) (-10123.920) [-10123.990] -- 0:14:15
725000 -- (-10115.118) (-10121.841) [-10106.834] (-10109.764) * (-10112.465) (-10107.604) [-10115.250] (-10123.992) -- 0:14:12
Average standard deviation of split frequencies: 0.005122
726000 -- [-10099.485] (-10114.799) (-10118.380) (-10110.165) * (-10114.828) (-10108.461) (-10120.329) [-10110.986] -- 0:14:09
727000 -- [-10101.472] (-10121.808) (-10110.012) (-10118.622) * (-10103.063) (-10110.063) (-10107.219) [-10104.513] -- 0:14:06
728000 -- (-10115.940) (-10118.833) [-10111.459] (-10118.362) * (-10102.382) [-10103.564] (-10105.876) (-10101.258) -- 0:14:03
729000 -- (-10123.694) (-10108.995) (-10111.582) [-10111.138] * (-10112.317) (-10123.453) (-10108.119) [-10108.585] -- 0:14:00
730000 -- (-10113.056) (-10119.958) [-10110.741] (-10110.282) * [-10101.685] (-10116.734) (-10120.939) (-10103.939) -- 0:13:57
Average standard deviation of split frequencies: 0.004767
731000 -- [-10108.581] (-10114.063) (-10121.481) (-10114.582) * [-10115.173] (-10127.284) (-10117.952) (-10107.494) -- 0:13:54
732000 -- (-10123.399) [-10105.832] (-10113.601) (-10116.060) * (-10115.255) [-10114.405] (-10121.090) (-10115.484) -- 0:13:51
733000 -- [-10113.976] (-10106.019) (-10113.952) (-10106.651) * (-10118.014) [-10100.265] (-10111.073) (-10118.285) -- 0:13:47
734000 -- [-10106.111] (-10122.776) (-10116.090) (-10108.855) * (-10115.377) (-10109.428) (-10106.755) [-10112.584] -- 0:13:44
735000 -- [-10113.640] (-10106.484) (-10107.630) (-10112.691) * (-10106.858) [-10108.728] (-10120.472) (-10108.153) -- 0:13:41
Average standard deviation of split frequencies: 0.004626
736000 -- (-10117.885) (-10109.835) [-10104.692] (-10117.628) * [-10112.593] (-10111.610) (-10104.903) (-10113.162) -- 0:13:38
737000 -- [-10113.396] (-10104.259) (-10118.947) (-10107.975) * (-10109.455) (-10122.055) [-10105.237] (-10112.948) -- 0:13:35
738000 -- (-10110.906) (-10113.972) (-10115.455) [-10106.689] * (-10107.927) [-10103.639] (-10121.690) (-10109.435) -- 0:13:32
739000 -- (-10109.083) (-10122.598) (-10108.703) [-10110.705] * [-10105.269] (-10120.958) (-10102.475) (-10116.390) -- 0:13:29
740000 -- (-10111.385) [-10114.905] (-10108.279) (-10107.861) * (-10118.941) (-10123.110) [-10103.003] (-10111.146) -- 0:13:26
Average standard deviation of split frequencies: 0.004561
741000 -- (-10118.434) [-10105.106] (-10099.808) (-10116.625) * [-10106.554] (-10119.592) (-10103.671) (-10103.023) -- 0:13:23
742000 -- (-10108.021) (-10115.612) [-10101.607] (-10113.261) * (-10117.460) [-10117.920] (-10117.312) (-10101.496) -- 0:13:20
743000 -- [-10110.373] (-10110.262) (-10100.424) (-10114.705) * (-10116.920) [-10112.182] (-10107.825) (-10106.687) -- 0:13:17
744000 -- (-10118.092) [-10111.828] (-10107.058) (-10113.540) * [-10110.442] (-10099.203) (-10117.602) (-10110.231) -- 0:13:14
745000 -- (-10109.042) (-10117.518) [-10103.260] (-10107.391) * (-10108.806) (-10123.806) (-10102.067) [-10099.675] -- 0:13:11
Average standard deviation of split frequencies: 0.004669
746000 -- (-10121.374) [-10112.355] (-10120.440) (-10114.569) * (-10128.702) (-10110.956) [-10106.624] (-10117.315) -- 0:13:07
747000 -- (-10116.247) [-10106.938] (-10121.566) (-10117.620) * (-10111.769) (-10114.408) [-10107.760] (-10103.639) -- 0:13:04
748000 -- (-10117.227) [-10110.719] (-10113.735) (-10109.389) * (-10112.295) [-10109.795] (-10116.542) (-10104.975) -- 0:13:01
749000 -- [-10112.789] (-10117.569) (-10116.754) (-10116.176) * [-10113.416] (-10101.604) (-10115.395) (-10109.170) -- 0:12:58
750000 -- (-10122.396) (-10118.294) [-10101.791] (-10112.347) * (-10112.278) [-10112.326] (-10110.260) (-10115.017) -- 0:12:55
Average standard deviation of split frequencies: 0.004535
751000 -- (-10120.758) (-10119.805) (-10096.736) [-10113.616] * (-10113.899) [-10113.529] (-10115.991) (-10108.538) -- 0:12:52
752000 -- (-10112.051) (-10113.621) [-10096.658] (-10107.304) * [-10106.351] (-10109.746) (-10112.991) (-10097.172) -- 0:12:49
753000 -- (-10115.533) (-10110.262) [-10109.928] (-10109.899) * [-10109.881] (-10114.591) (-10107.739) (-10107.194) -- 0:12:46
754000 -- (-10111.638) (-10113.351) [-10110.054] (-10105.890) * (-10112.469) (-10117.988) [-10105.466] (-10108.480) -- 0:12:43
755000 -- (-10110.020) (-10110.582) (-10109.242) [-10103.427] * [-10107.453] (-10113.496) (-10101.215) (-10125.574) -- 0:12:39
Average standard deviation of split frequencies: 0.004469
756000 -- (-10119.448) (-10126.098) (-10114.733) [-10111.085] * (-10109.477) [-10104.271] (-10114.554) (-10103.927) -- 0:12:36
757000 -- [-10118.812] (-10121.231) (-10104.590) (-10107.380) * (-10118.387) (-10108.625) (-10101.696) [-10108.965] -- 0:12:33
758000 -- (-10117.743) (-10108.950) (-10107.027) [-10119.454] * [-10104.886] (-10104.762) (-10113.883) (-10114.183) -- 0:12:30
759000 -- [-10109.941] (-10116.938) (-10103.324) (-10104.663) * (-10108.043) [-10111.975] (-10121.789) (-10106.847) -- 0:12:27
760000 -- (-10111.635) (-10115.812) (-10102.847) [-10100.171] * (-10112.630) (-10100.725) (-10119.771) [-10108.638] -- 0:12:24
Average standard deviation of split frequencies: 0.004304
761000 -- (-10115.257) [-10105.304] (-10112.613) (-10104.438) * (-10120.382) (-10117.263) [-10117.265] (-10113.781) -- 0:12:21
762000 -- (-10117.810) [-10103.426] (-10119.560) (-10112.848) * (-10111.604) (-10099.650) [-10117.583] (-10109.201) -- 0:12:18
763000 -- (-10113.524) (-10106.643) [-10108.069] (-10129.036) * (-10123.475) (-10114.023) [-10112.261] (-10102.359) -- 0:12:15
764000 -- [-10102.598] (-10112.159) (-10104.291) (-10111.580) * (-10123.794) (-10108.380) (-10106.925) [-10105.743] -- 0:12:12
765000 -- (-10110.790) (-10111.714) [-10104.801] (-10114.784) * [-10111.252] (-10110.805) (-10100.229) (-10103.136) -- 0:12:08
Average standard deviation of split frequencies: 0.004171
766000 -- (-10107.270) [-10098.154] (-10110.418) (-10121.640) * (-10119.150) (-10124.262) [-10106.353] (-10113.421) -- 0:12:05
767000 -- (-10110.631) (-10104.199) [-10104.552] (-10118.148) * (-10113.000) [-10106.853] (-10119.728) (-10112.691) -- 0:12:02
768000 -- (-10114.216) [-10097.788] (-10110.004) (-10109.093) * (-10109.194) [-10105.220] (-10109.574) (-10125.913) -- 0:11:59
769000 -- (-10112.716) (-10105.094) (-10104.013) [-10108.475] * (-10115.538) (-10112.067) [-10121.284] (-10105.000) -- 0:11:56
770000 -- (-10112.107) (-10118.591) [-10107.842] (-10106.322) * (-10124.064) (-10104.516) (-10103.952) [-10101.353] -- 0:11:53
Average standard deviation of split frequencies: 0.004214
771000 -- (-10111.135) (-10107.258) [-10106.477] (-10114.392) * (-10112.682) (-10105.133) [-10099.318] (-10110.284) -- 0:11:50
772000 -- (-10111.103) (-10112.040) (-10103.413) [-10109.513] * (-10099.824) (-10106.352) [-10104.436] (-10111.517) -- 0:11:47
773000 -- (-10113.586) (-10115.986) [-10108.458] (-10111.100) * (-10107.293) (-10110.894) (-10112.581) [-10115.954] -- 0:11:44
774000 -- [-10101.748] (-10110.277) (-10106.851) (-10121.942) * (-10117.437) (-10111.421) (-10124.511) [-10107.615] -- 0:11:41
775000 -- (-10113.145) [-10100.637] (-10115.037) (-10113.800) * (-10140.615) (-10117.796) (-10107.507) [-10117.942] -- 0:11:37
Average standard deviation of split frequencies: 0.004185
776000 -- (-10104.322) (-10096.193) (-10107.501) [-10111.531] * (-10111.187) (-10109.403) [-10108.285] (-10113.901) -- 0:11:35
777000 -- (-10119.250) (-10115.508) (-10117.974) [-10115.754] * (-10104.983) (-10133.921) (-10108.695) [-10104.223] -- 0:11:31
778000 -- (-10113.602) (-10106.008) (-10111.652) [-10115.669] * (-10117.967) (-10119.319) (-10107.585) [-10106.400] -- 0:11:28
779000 -- (-10113.286) (-10124.280) [-10118.606] (-10121.181) * [-10107.256] (-10125.059) (-10113.871) (-10104.065) -- 0:11:25
780000 -- (-10106.336) [-10106.607] (-10116.477) (-10117.591) * (-10120.725) (-10123.439) [-10113.474] (-10106.701) -- 0:11:22
Average standard deviation of split frequencies: 0.004227
781000 -- [-10125.020] (-10113.716) (-10112.834) (-10119.140) * (-10108.574) (-10108.192) (-10123.388) [-10106.971] -- 0:11:19
782000 -- [-10101.657] (-10115.225) (-10097.858) (-10117.294) * (-10107.773) [-10106.185] (-10133.546) (-10114.023) -- 0:11:16
783000 -- (-10105.221) (-10125.637) [-10109.612] (-10111.976) * [-10106.029] (-10103.150) (-10125.628) (-10115.340) -- 0:11:13
784000 -- (-10108.303) (-10110.963) (-10110.693) [-10102.174] * (-10111.645) (-10116.170) (-10131.534) [-10108.253] -- 0:11:10
785000 -- (-10109.748) (-10108.813) (-10114.462) [-10106.978] * (-10117.618) [-10105.447] (-10113.713) (-10116.880) -- 0:11:07
Average standard deviation of split frequencies: 0.004098
786000 -- (-10118.479) (-10112.127) [-10106.475] (-10114.182) * (-10116.040) [-10102.282] (-10137.866) (-10110.678) -- 0:11:04
787000 -- (-10110.425) (-10109.078) (-10109.546) [-10108.705] * (-10112.680) (-10113.778) [-10122.440] (-10107.626) -- 0:11:00
788000 -- (-10102.104) [-10115.679] (-10110.263) (-10110.541) * [-10104.399] (-10120.307) (-10117.925) (-10110.269) -- 0:10:57
789000 -- (-10119.674) [-10110.421] (-10123.659) (-10111.614) * [-10112.935] (-10126.759) (-10118.056) (-10103.170) -- 0:10:54
790000 -- [-10104.525] (-10117.747) (-10109.156) (-10109.621) * (-10115.337) (-10104.684) [-10102.989] (-10108.571) -- 0:10:51
Average standard deviation of split frequencies: 0.004140
791000 -- (-10105.260) (-10102.992) [-10111.456] (-10106.593) * (-10128.234) [-10111.210] (-10117.501) (-10102.199) -- 0:10:48
792000 -- (-10126.049) (-10104.282) (-10126.976) [-10111.465] * (-10115.910) (-10111.316) [-10120.975] (-10107.208) -- 0:10:45
793000 -- (-10117.263) (-10112.913) [-10099.326] (-10119.333) * (-10118.290) [-10115.307] (-10112.565) (-10109.086) -- 0:10:42
794000 -- (-10106.465) (-10120.995) [-10110.244] (-10108.905) * (-10119.276) [-10101.240] (-10131.459) (-10116.087) -- 0:10:39
795000 -- (-10118.037) (-10112.699) (-10112.744) [-10116.436] * (-10113.365) [-10106.552] (-10107.676) (-10103.011) -- 0:10:36
Average standard deviation of split frequencies: 0.003981
796000 -- (-10103.277) (-10116.411) (-10103.213) [-10109.301] * (-10104.510) (-10107.978) (-10101.808) [-10112.333] -- 0:10:33
797000 -- (-10111.971) [-10097.155] (-10105.048) (-10112.921) * (-10104.454) (-10115.663) [-10105.050] (-10111.285) -- 0:10:29
798000 -- (-10110.617) (-10112.590) (-10111.367) [-10105.996] * (-10120.953) (-10113.007) [-10101.401] (-10119.503) -- 0:10:26
799000 -- [-10106.452] (-10101.954) (-10111.810) (-10111.821) * [-10107.395] (-10109.470) (-10102.554) (-10112.600) -- 0:10:23
800000 -- (-10127.958) (-10110.243) [-10104.614] (-10108.396) * [-10122.865] (-10106.756) (-10108.599) (-10126.824) -- 0:10:20
Average standard deviation of split frequencies: 0.004089
801000 -- (-10120.761) (-10111.572) (-10124.982) [-10106.224] * [-10113.374] (-10114.708) (-10130.946) (-10119.660) -- 0:10:17
802000 -- (-10112.438) (-10115.263) [-10112.235] (-10106.168) * (-10107.871) [-10111.999] (-10113.152) (-10105.950) -- 0:10:14
803000 -- (-10120.188) (-10105.818) [-10104.267] (-10109.181) * (-10112.607) [-10100.272] (-10112.720) (-10102.754) -- 0:10:11
804000 -- (-10104.993) (-10123.185) (-10121.651) [-10096.297] * [-10100.107] (-10116.318) (-10114.008) (-10108.164) -- 0:10:08
805000 -- (-10119.727) (-10113.673) (-10103.440) [-10115.523] * (-10120.766) (-10098.062) (-10105.533) [-10115.594] -- 0:10:05
Average standard deviation of split frequencies: 0.004029
806000 -- (-10114.086) (-10115.635) [-10098.710] (-10114.598) * (-10119.072) [-10107.002] (-10116.890) (-10109.852) -- 0:10:01
807000 -- (-10115.362) [-10104.938] (-10119.118) (-10132.768) * (-10116.199) [-10115.309] (-10109.992) (-10114.211) -- 0:09:58
808000 -- (-10112.401) [-10107.210] (-10109.754) (-10117.947) * (-10115.710) (-10111.381) (-10116.929) [-10108.816] -- 0:09:55
809000 -- [-10106.585] (-10111.499) (-10117.400) (-10106.063) * (-10111.439) (-10122.348) (-10107.989) [-10113.043] -- 0:09:52
810000 -- [-10106.190] (-10126.873) (-10111.658) (-10111.881) * (-10120.690) (-10104.095) [-10112.737] (-10116.101) -- 0:09:49
Average standard deviation of split frequencies: 0.003974
811000 -- (-10100.782) (-10107.588) [-10108.779] (-10097.871) * [-10110.819] (-10107.515) (-10100.098) (-10120.488) -- 0:09:46
812000 -- (-10114.307) [-10101.051] (-10109.163) (-10111.617) * (-10112.206) [-10103.161] (-10109.587) (-10128.099) -- 0:09:43
813000 -- (-10111.984) (-10114.961) [-10109.327] (-10104.072) * (-10116.637) (-10121.678) (-10113.173) [-10108.227] -- 0:09:40
814000 -- (-10121.204) (-10108.935) [-10104.033] (-10116.694) * (-10109.484) (-10107.551) (-10107.228) [-10110.321] -- 0:09:37
815000 -- (-10114.387) (-10105.394) (-10107.262) [-10108.193] * (-10103.379) (-10106.622) (-10114.327) [-10112.389] -- 0:09:34
Average standard deviation of split frequencies: 0.003851
816000 -- [-10107.649] (-10109.504) (-10116.037) (-10112.654) * (-10108.187) [-10107.387] (-10117.682) (-10117.502) -- 0:09:30
817000 -- (-10102.761) [-10106.121] (-10121.372) (-10115.928) * (-10108.959) [-10099.950] (-10107.103) (-10117.178) -- 0:09:27
818000 -- (-10102.350) (-10106.287) (-10106.446) [-10107.105] * (-10122.996) [-10105.161] (-10118.945) (-10112.524) -- 0:09:24
819000 -- (-10108.403) [-10106.209] (-10104.861) (-10109.308) * (-10107.665) (-10105.437) (-10126.033) [-10105.959] -- 0:09:21
820000 -- (-10111.308) [-10101.136] (-10119.339) (-10109.329) * (-10107.893) (-10102.345) (-10117.478) [-10101.304] -- 0:09:18
Average standard deviation of split frequencies: 0.003861
821000 -- (-10117.668) (-10116.534) [-10112.197] (-10105.603) * (-10111.074) (-10118.806) (-10114.145) [-10109.914] -- 0:09:15
822000 -- (-10110.884) [-10105.039] (-10103.969) (-10116.565) * (-10108.254) (-10111.445) [-10106.266] (-10106.267) -- 0:09:12
823000 -- (-10099.915) [-10103.697] (-10106.102) (-10112.149) * (-10101.900) (-10119.422) [-10099.499] (-10111.944) -- 0:09:09
824000 -- [-10107.633] (-10115.357) (-10108.441) (-10113.860) * (-10112.782) (-10122.038) (-10113.049) [-10105.059] -- 0:09:06
825000 -- [-10108.349] (-10120.122) (-10107.130) (-10108.445) * (-10113.675) [-10112.070] (-10117.314) (-10111.869) -- 0:09:03
Average standard deviation of split frequencies: 0.003773
826000 -- (-10124.138) (-10128.134) [-10117.434] (-10111.051) * (-10107.315) [-10105.814] (-10123.587) (-10105.059) -- 0:08:59
827000 -- (-10107.974) (-10113.233) [-10110.775] (-10119.402) * (-10117.358) (-10107.447) [-10099.029] (-10125.582) -- 0:08:56
828000 -- [-10102.421] (-10109.088) (-10112.145) (-10106.609) * [-10108.252] (-10108.674) (-10105.111) (-10111.949) -- 0:08:53
829000 -- [-10102.251] (-10109.421) (-10118.053) (-10109.078) * [-10109.981] (-10104.786) (-10105.532) (-10116.235) -- 0:08:50
830000 -- [-10099.580] (-10120.393) (-10109.076) (-10130.886) * (-10108.409) (-10118.842) [-10110.244] (-10131.580) -- 0:08:47
Average standard deviation of split frequencies: 0.003531
831000 -- [-10101.609] (-10110.306) (-10108.706) (-10124.397) * [-10107.039] (-10113.272) (-10112.328) (-10120.019) -- 0:08:44
832000 -- (-10108.264) [-10110.885] (-10108.881) (-10128.938) * [-10116.278] (-10111.687) (-10114.010) (-10110.796) -- 0:08:41
833000 -- [-10105.860] (-10107.060) (-10113.868) (-10118.928) * (-10109.140) (-10107.430) (-10115.613) [-10107.480] -- 0:08:38
834000 -- (-10104.953) [-10105.438] (-10119.119) (-10116.118) * (-10114.711) (-10112.603) (-10108.899) [-10116.230] -- 0:08:35
835000 -- (-10106.830) [-10109.431] (-10108.698) (-10118.801) * (-10110.133) [-10110.203] (-10099.109) (-10115.041) -- 0:08:31
Average standard deviation of split frequencies: 0.003321
836000 -- (-10110.576) [-10102.443] (-10123.084) (-10117.392) * (-10114.033) (-10111.426) [-10113.568] (-10109.323) -- 0:08:29
837000 -- (-10119.232) (-10113.774) [-10120.872] (-10116.877) * (-10108.752) (-10111.214) [-10100.960] (-10114.412) -- 0:08:25
838000 -- (-10112.455) (-10107.249) (-10126.642) [-10108.441] * (-10112.759) [-10114.906] (-10102.138) (-10117.128) -- 0:08:22
839000 -- [-10109.596] (-10112.194) (-10124.593) (-10108.636) * (-10102.635) (-10117.538) (-10107.010) [-10105.568] -- 0:08:19
840000 -- (-10106.175) (-10100.548) (-10118.127) [-10102.389] * (-10107.032) (-10113.093) (-10108.309) [-10110.390] -- 0:08:16
Average standard deviation of split frequencies: 0.003240
841000 -- (-10103.899) (-10109.165) (-10118.635) [-10106.051] * [-10102.844] (-10103.466) (-10109.234) (-10116.855) -- 0:08:13
842000 -- [-10107.262] (-10118.098) (-10108.094) (-10105.529) * (-10117.835) (-10107.697) (-10118.150) [-10111.401] -- 0:08:10
843000 -- (-10103.432) (-10116.820) (-10105.039) [-10111.425] * [-10109.269] (-10107.167) (-10105.350) (-10105.628) -- 0:08:07
844000 -- (-10116.582) (-10118.910) [-10102.604] (-10102.887) * [-10111.857] (-10104.910) (-10121.413) (-10115.474) -- 0:08:04
845000 -- (-10110.062) (-10104.930) [-10111.911] (-10103.723) * (-10119.231) [-10111.578] (-10113.565) (-10106.072) -- 0:08:00
Average standard deviation of split frequencies: 0.003189
846000 -- (-10117.908) [-10104.322] (-10106.764) (-10114.013) * (-10110.966) [-10116.040] (-10115.153) (-10106.135) -- 0:07:57
847000 -- [-10104.495] (-10108.147) (-10115.718) (-10115.453) * [-10118.003] (-10112.004) (-10129.168) (-10101.442) -- 0:07:54
848000 -- (-10101.824) [-10104.720] (-10113.524) (-10115.319) * (-10133.736) (-10115.653) [-10111.283] (-10096.025) -- 0:07:51
849000 -- [-10108.487] (-10116.890) (-10101.412) (-10128.045) * (-10113.000) [-10102.708] (-10120.910) (-10114.883) -- 0:07:48
850000 -- (-10113.358) [-10103.468] (-10122.479) (-10115.148) * (-10108.271) (-10115.408) (-10110.135) [-10099.239] -- 0:07:45
Average standard deviation of split frequencies: 0.003048
851000 -- (-10106.851) (-10113.063) [-10105.164] (-10131.942) * [-10103.806] (-10110.259) (-10119.194) (-10108.907) -- 0:07:42
852000 -- [-10108.522] (-10103.937) (-10100.140) (-10114.439) * [-10115.085] (-10110.403) (-10106.049) (-10121.284) -- 0:07:39
853000 -- (-10119.051) [-10108.406] (-10102.523) (-10114.946) * [-10114.982] (-10112.870) (-10116.020) (-10107.539) -- 0:07:36
854000 -- (-10108.091) (-10107.377) [-10109.576] (-10109.760) * (-10114.831) (-10110.448) [-10106.759] (-10099.381) -- 0:07:33
855000 -- [-10103.459] (-10111.472) (-10113.419) (-10102.180) * (-10104.085) (-10107.862) [-10101.740] (-10122.750) -- 0:07:29
Average standard deviation of split frequencies: 0.003029
856000 -- (-10119.983) [-10103.351] (-10112.539) (-10113.251) * (-10113.184) (-10115.441) [-10109.651] (-10110.332) -- 0:07:26
857000 -- (-10102.814) (-10099.938) [-10101.709] (-10124.484) * (-10109.079) (-10113.497) [-10108.704] (-10103.413) -- 0:07:23
858000 -- [-10105.084] (-10111.705) (-10105.166) (-10104.088) * (-10104.447) (-10103.100) (-10113.166) [-10113.592] -- 0:07:20
859000 -- [-10102.434] (-10112.094) (-10105.213) (-10111.049) * (-10113.030) (-10106.897) [-10108.853] (-10112.266) -- 0:07:17
860000 -- (-10116.276) (-10110.981) [-10100.820] (-10106.098) * (-10107.611) (-10105.851) [-10107.687] (-10107.138) -- 0:07:14
Average standard deviation of split frequencies: 0.003438
861000 -- (-10125.071) (-10111.171) (-10111.880) [-10101.355] * [-10097.702] (-10102.234) (-10119.076) (-10109.126) -- 0:07:11
862000 -- (-10111.124) (-10107.253) (-10110.606) [-10108.434] * (-10112.517) [-10112.175] (-10105.186) (-10120.553) -- 0:07:08
863000 -- (-10117.543) (-10110.791) (-10104.115) [-10112.631] * (-10111.524) [-10102.326] (-10119.194) (-10111.644) -- 0:07:05
864000 -- (-10105.512) [-10122.643] (-10105.966) (-10117.838) * [-10111.673] (-10117.293) (-10123.849) (-10119.148) -- 0:07:02
865000 -- (-10107.715) (-10124.670) [-10107.809] (-10117.172) * (-10105.786) [-10110.099] (-10109.803) (-10108.594) -- 0:06:59
Average standard deviation of split frequencies: 0.003357
866000 -- (-10116.677) (-10114.992) [-10097.305] (-10107.947) * [-10104.672] (-10120.381) (-10099.420) (-10103.957) -- 0:06:55
867000 -- [-10108.540] (-10119.831) (-10101.330) (-10101.195) * (-10135.489) (-10108.896) (-10103.277) [-10098.707] -- 0:06:52
868000 -- (-10107.814) (-10108.653) (-10105.707) [-10109.947] * (-10103.400) (-10110.438) (-10113.382) [-10110.050] -- 0:06:49
869000 -- (-10104.314) (-10110.748) [-10112.249] (-10104.764) * (-10106.559) (-10112.858) (-10110.532) [-10108.594] -- 0:06:46
870000 -- (-10105.577) [-10102.416] (-10114.621) (-10113.633) * (-10111.439) (-10106.840) [-10110.101] (-10102.529) -- 0:06:43
Average standard deviation of split frequencies: 0.003128
871000 -- (-10117.353) (-10098.097) (-10103.393) [-10111.507] * (-10114.143) (-10102.085) [-10098.077] (-10101.351) -- 0:06:40
872000 -- (-10127.916) (-10108.422) [-10112.085] (-10112.904) * [-10110.208] (-10105.509) (-10114.571) (-10109.382) -- 0:06:37
873000 -- (-10104.705) [-10109.232] (-10109.934) (-10110.754) * (-10114.343) (-10112.057) (-10113.810) [-10111.427] -- 0:06:34
874000 -- [-10109.447] (-10108.990) (-10114.826) (-10111.417) * (-10106.939) (-10104.999) [-10110.196] (-10119.703) -- 0:06:31
875000 -- (-10110.850) (-10102.969) (-10113.865) [-10103.545] * [-10111.363] (-10108.468) (-10110.853) (-10102.200) -- 0:06:28
Average standard deviation of split frequencies: 0.002900
876000 -- (-10126.654) (-10110.091) [-10116.388] (-10109.244) * (-10112.392) (-10106.877) (-10102.220) [-10106.003] -- 0:06:24
877000 -- [-10102.784] (-10116.374) (-10115.193) (-10108.669) * [-10107.175] (-10105.749) (-10104.849) (-10104.763) -- 0:06:21
878000 -- (-10107.066) (-10115.630) [-10110.376] (-10109.564) * (-10105.663) [-10107.094] (-10101.479) (-10119.941) -- 0:06:18
879000 -- [-10103.592] (-10103.028) (-10112.438) (-10114.437) * [-10119.809] (-10105.956) (-10108.728) (-10114.738) -- 0:06:15
880000 -- (-10112.873) (-10105.256) (-10109.169) [-10111.770] * (-10108.843) [-10108.547] (-10103.036) (-10113.626) -- 0:06:12
Average standard deviation of split frequencies: 0.002795
881000 -- [-10107.480] (-10105.975) (-10112.770) (-10111.868) * (-10101.216) (-10109.643) (-10104.157) [-10105.492] -- 0:06:09
882000 -- (-10114.716) (-10112.753) [-10107.151] (-10106.478) * (-10109.053) (-10105.472) (-10106.785) [-10117.977] -- 0:06:06
883000 -- (-10108.314) [-10107.809] (-10110.781) (-10117.987) * (-10119.432) (-10099.812) (-10109.199) [-10110.147] -- 0:06:03
884000 -- (-10121.074) (-10108.391) [-10100.022] (-10119.345) * (-10106.467) (-10112.181) [-10107.980] (-10106.773) -- 0:06:00
885000 -- (-10104.837) (-10112.051) (-10106.038) [-10109.820] * (-10118.928) [-10107.861] (-10106.813) (-10112.608) -- 0:05:56
Average standard deviation of split frequencies: 0.002897
886000 -- [-10105.556] (-10106.509) (-10107.346) (-10121.036) * (-10116.941) (-10122.350) [-10101.701] (-10106.757) -- 0:05:53
887000 -- (-10101.356) [-10107.172] (-10103.861) (-10119.316) * (-10104.784) (-10106.739) [-10095.633] (-10110.339) -- 0:05:50
888000 -- (-10114.302) (-10114.231) (-10100.198) [-10107.392] * (-10098.218) (-10108.642) (-10109.781) [-10102.030] -- 0:05:47
889000 -- [-10106.662] (-10121.315) (-10108.263) (-10114.157) * (-10103.909) [-10112.137] (-10128.501) (-10109.985) -- 0:05:44
890000 -- (-10111.971) (-10112.449) (-10112.049) [-10107.608] * (-10106.585) (-10119.562) [-10103.733] (-10119.236) -- 0:05:41
Average standard deviation of split frequencies: 0.002852
891000 -- (-10104.113) [-10104.971] (-10116.845) (-10111.837) * (-10112.483) (-10106.132) [-10104.576] (-10107.444) -- 0:05:38
892000 -- (-10105.626) (-10117.220) [-10114.516] (-10101.180) * [-10112.560] (-10109.799) (-10121.936) (-10102.860) -- 0:05:35
893000 -- (-10108.538) (-10112.101) (-10116.433) [-10109.291] * (-10107.779) (-10113.203) [-10113.349] (-10105.381) -- 0:05:32
894000 -- [-10109.732] (-10108.870) (-10109.155) (-10101.873) * [-10104.148] (-10100.494) (-10112.238) (-10107.639) -- 0:05:29
895000 -- (-10118.480) (-10114.245) (-10108.240) [-10105.811] * (-10109.533) (-10114.892) [-10118.120] (-10110.968) -- 0:05:25
Average standard deviation of split frequencies: 0.002718
896000 -- [-10109.656] (-10116.817) (-10112.455) (-10106.593) * (-10110.116) (-10108.463) [-10120.573] (-10102.694) -- 0:05:22
897000 -- (-10118.282) (-10117.631) [-10118.347] (-10116.114) * [-10116.876] (-10115.649) (-10100.401) (-10106.083) -- 0:05:19
898000 -- (-10108.440) (-10111.849) [-10118.340] (-10112.160) * [-10104.260] (-10104.416) (-10118.847) (-10108.999) -- 0:05:16
899000 -- (-10113.677) (-10119.858) [-10112.067] (-10123.676) * [-10102.877] (-10109.427) (-10113.926) (-10113.389) -- 0:05:13
900000 -- (-10106.330) (-10110.832) [-10100.327] (-10110.599) * (-10108.861) [-10109.001] (-10117.407) (-10116.065) -- 0:05:10
Average standard deviation of split frequencies: 0.002588
901000 -- (-10111.634) [-10109.710] (-10104.051) (-10112.949) * [-10117.192] (-10113.655) (-10108.747) (-10107.176) -- 0:05:07
902000 -- [-10109.484] (-10107.911) (-10115.255) (-10106.476) * (-10101.914) (-10112.088) [-10104.208] (-10107.353) -- 0:05:04
903000 -- (-10108.983) (-10104.598) (-10110.873) [-10103.070] * (-10108.163) [-10109.598] (-10108.038) (-10114.535) -- 0:05:01
904000 -- (-10110.914) (-10098.906) [-10105.587] (-10099.532) * (-10124.451) (-10117.336) (-10106.799) [-10110.128] -- 0:04:57
905000 -- (-10114.344) (-10114.419) [-10111.466] (-10108.713) * [-10103.294] (-10117.121) (-10101.562) (-10109.663) -- 0:04:54
Average standard deviation of split frequencies: 0.002544
906000 -- (-10128.888) (-10116.285) [-10105.870] (-10108.262) * (-10112.652) (-10112.396) [-10108.896] (-10106.370) -- 0:04:51
907000 -- (-10114.761) [-10106.536] (-10106.466) (-10098.161) * (-10108.113) (-10102.784) (-10103.090) [-10103.987] -- 0:04:48
908000 -- (-10122.642) [-10101.354] (-10113.918) (-10111.708) * (-10113.153) (-10111.115) [-10103.106] (-10126.011) -- 0:04:45
909000 -- (-10118.549) (-10109.886) (-10107.134) [-10113.562] * (-10108.364) [-10112.951] (-10112.167) (-10108.874) -- 0:04:42
910000 -- (-10109.427) [-10105.114] (-10113.634) (-10104.932) * [-10116.675] (-10106.960) (-10113.219) (-10121.022) -- 0:04:39
Average standard deviation of split frequencies: 0.002531
911000 -- (-10121.591) [-10108.747] (-10105.281) (-10111.436) * [-10106.568] (-10110.046) (-10104.480) (-10118.173) -- 0:04:36
912000 -- [-10112.624] (-10114.216) (-10114.275) (-10103.693) * (-10103.095) [-10108.672] (-10105.052) (-10114.749) -- 0:04:33
913000 -- [-10112.079] (-10124.859) (-10107.676) (-10107.172) * (-10110.623) [-10115.821] (-10107.867) (-10105.012) -- 0:04:30
914000 -- (-10109.410) (-10120.786) [-10107.507] (-10119.701) * [-10107.884] (-10108.720) (-10120.594) (-10115.324) -- 0:04:26
915000 -- (-10105.375) [-10112.805] (-10112.598) (-10125.565) * (-10119.599) (-10115.701) [-10110.574] (-10114.122) -- 0:04:23
Average standard deviation of split frequencies: 0.002402
916000 -- (-10111.210) (-10107.382) [-10118.589] (-10108.917) * (-10100.310) (-10113.017) [-10122.564] (-10097.546) -- 0:04:20
917000 -- (-10104.894) [-10110.395] (-10106.834) (-10113.103) * (-10108.697) (-10115.990) (-10113.386) [-10097.686] -- 0:04:17
918000 -- (-10110.649) (-10116.687) [-10112.806] (-10106.460) * (-10118.098) (-10107.711) (-10104.449) [-10116.488] -- 0:04:14
919000 -- (-10104.891) [-10107.532] (-10117.725) (-10102.026) * (-10102.196) (-10113.552) [-10103.016] (-10117.975) -- 0:04:11
920000 -- (-10103.915) [-10109.179] (-10113.107) (-10100.176) * (-10114.215) (-10097.708) (-10117.512) [-10106.686] -- 0:04:08
Average standard deviation of split frequencies: 0.002333
921000 -- (-10111.040) [-10112.758] (-10105.076) (-10127.056) * (-10119.237) (-10107.821) (-10104.988) [-10103.992] -- 0:04:05
922000 -- (-10103.802) (-10106.542) [-10102.190] (-10113.657) * [-10114.105] (-10114.906) (-10117.148) (-10110.834) -- 0:04:02
923000 -- (-10111.022) [-10111.943] (-10116.060) (-10107.926) * (-10102.512) [-10104.449] (-10118.007) (-10098.722) -- 0:03:59
924000 -- (-10110.237) (-10111.883) (-10109.345) [-10102.742] * [-10112.510] (-10109.227) (-10107.777) (-10100.871) -- 0:03:55
925000 -- (-10118.431) (-10107.896) [-10098.569] (-10123.553) * [-10101.087] (-10113.911) (-10114.704) (-10124.542) -- 0:03:52
Average standard deviation of split frequencies: 0.002263
926000 -- (-10116.411) (-10113.453) [-10114.572] (-10126.207) * [-10112.885] (-10111.251) (-10102.690) (-10109.092) -- 0:03:49
927000 -- [-10104.264] (-10109.565) (-10111.477) (-10113.054) * [-10105.026] (-10104.781) (-10102.006) (-10107.737) -- 0:03:46
928000 -- (-10114.083) (-10111.822) [-10108.997] (-10110.034) * (-10109.842) (-10120.538) [-10107.212] (-10119.871) -- 0:03:43
929000 -- [-10110.205] (-10122.412) (-10118.311) (-10114.950) * (-10112.751) [-10104.610] (-10111.931) (-10121.054) -- 0:03:40
930000 -- (-10105.816) [-10106.602] (-10102.072) (-10115.234) * [-10099.859] (-10116.550) (-10109.778) (-10111.549) -- 0:03:37
Average standard deviation of split frequencies: 0.002392
931000 -- [-10105.502] (-10117.431) (-10110.635) (-10120.227) * (-10109.630) [-10105.040] (-10112.322) (-10103.585) -- 0:03:34
932000 -- [-10107.355] (-10118.680) (-10120.024) (-10107.295) * (-10107.955) (-10113.214) (-10115.279) [-10098.811] -- 0:03:31
933000 -- (-10110.748) (-10114.814) (-10114.595) [-10105.131] * (-10100.086) (-10109.448) [-10103.765] (-10112.420) -- 0:03:27
934000 -- (-10116.388) (-10125.696) (-10109.811) [-10101.664] * [-10107.084] (-10117.598) (-10107.209) (-10110.881) -- 0:03:24
935000 -- (-10104.387) (-10116.773) (-10125.550) [-10107.956] * [-10105.980] (-10105.670) (-10109.899) (-10109.189) -- 0:03:21
Average standard deviation of split frequencies: 0.002378
936000 -- [-10101.597] (-10110.898) (-10106.598) (-10105.596) * [-10102.883] (-10108.758) (-10112.620) (-10107.426) -- 0:03:18
937000 -- [-10105.980] (-10106.446) (-10108.319) (-10110.111) * (-10110.437) (-10110.622) [-10099.119] (-10112.922) -- 0:03:15
938000 -- (-10104.976) [-10111.109] (-10125.805) (-10129.912) * (-10110.743) (-10113.947) (-10107.682) [-10112.533] -- 0:03:12
939000 -- [-10109.411] (-10130.584) (-10112.242) (-10116.310) * [-10112.382] (-10109.193) (-10108.251) (-10119.272) -- 0:03:09
940000 -- [-10105.143] (-10119.172) (-10104.002) (-10124.467) * [-10104.030] (-10109.261) (-10113.972) (-10115.354) -- 0:03:06
Average standard deviation of split frequencies: 0.002422
941000 -- (-10103.903) (-10108.744) (-10125.035) [-10116.337] * (-10113.773) (-10117.918) (-10123.169) [-10105.620] -- 0:03:03
942000 -- (-10111.394) (-10106.841) [-10113.939] (-10104.455) * (-10115.837) [-10121.856] (-10107.529) (-10103.605) -- 0:03:00
943000 -- (-10113.521) (-10105.140) [-10116.086] (-10113.491) * (-10126.768) [-10102.652] (-10117.604) (-10104.246) -- 0:02:56
944000 -- (-10116.389) (-10119.278) [-10105.843] (-10116.672) * [-10105.160] (-10108.071) (-10108.986) (-10105.387) -- 0:02:53
945000 -- [-10103.554] (-10107.769) (-10103.202) (-10117.832) * (-10122.981) (-10110.340) (-10113.134) [-10110.990] -- 0:02:50
Average standard deviation of split frequencies: 0.002298
946000 -- (-10103.310) (-10106.939) (-10124.610) [-10108.660] * (-10102.248) (-10114.708) (-10125.321) [-10101.082] -- 0:02:47
947000 -- (-10112.231) [-10101.890] (-10116.951) (-10108.932) * [-10102.658] (-10108.893) (-10122.628) (-10104.293) -- 0:02:44
948000 -- [-10114.618] (-10104.244) (-10117.270) (-10117.588) * (-10108.591) [-10119.096] (-10110.205) (-10109.901) -- 0:02:41
949000 -- [-10114.345] (-10112.152) (-10109.208) (-10107.863) * (-10113.924) (-10112.723) [-10108.941] (-10112.219) -- 0:02:38
950000 -- (-10113.091) (-10117.819) (-10106.280) [-10105.336] * (-10117.781) (-10110.314) (-10115.929) [-10107.072] -- 0:02:35
Average standard deviation of split frequencies: 0.002369
951000 -- (-10112.051) [-10112.262] (-10120.391) (-10108.518) * (-10133.574) [-10110.434] (-10105.444) (-10108.182) -- 0:02:32
952000 -- (-10108.358) (-10122.093) (-10111.605) [-10106.717] * (-10115.218) (-10117.246) [-10105.504] (-10101.587) -- 0:02:28
953000 -- (-10113.234) (-10108.436) (-10112.584) [-10102.397] * (-10111.195) (-10106.606) (-10112.057) [-10114.017] -- 0:02:25
954000 -- [-10108.323] (-10125.025) (-10101.383) (-10105.470) * (-10107.807) (-10113.977) (-10107.725) [-10104.874] -- 0:02:22
955000 -- [-10102.227] (-10114.742) (-10114.707) (-10115.332) * (-10101.686) (-10112.289) (-10118.267) [-10106.260] -- 0:02:19
Average standard deviation of split frequencies: 0.002520
956000 -- (-10107.452) (-10113.656) [-10100.489] (-10105.053) * (-10102.969) (-10107.143) (-10117.401) [-10105.317] -- 0:02:16
957000 -- [-10106.417] (-10115.019) (-10110.952) (-10106.754) * (-10111.345) (-10109.146) [-10119.718] (-10104.596) -- 0:02:13
958000 -- [-10110.742] (-10110.311) (-10113.467) (-10129.114) * (-10107.951) [-10098.496] (-10109.975) (-10120.144) -- 0:02:10
959000 -- (-10104.812) (-10116.217) [-10105.592] (-10122.247) * (-10117.904) (-10111.845) [-10100.902] (-10110.586) -- 0:02:07
960000 -- (-10115.534) (-10118.197) [-10104.304] (-10108.433) * [-10102.145] (-10123.179) (-10117.718) (-10103.643) -- 0:02:04
Average standard deviation of split frequencies: 0.002454
961000 -- (-10125.612) (-10120.051) (-10107.757) [-10100.409] * (-10109.100) [-10115.194] (-10112.454) (-10109.001) -- 0:02:01
962000 -- [-10109.842] (-10110.459) (-10112.037) (-10108.028) * (-10113.724) (-10118.118) (-10099.125) [-10103.049] -- 0:01:57
963000 -- (-10114.050) (-10107.240) (-10107.316) [-10101.394] * (-10117.331) (-10117.931) [-10096.148] (-10110.065) -- 0:01:54
964000 -- [-10107.832] (-10111.022) (-10115.954) (-10110.584) * (-10104.345) [-10111.725] (-10104.654) (-10115.785) -- 0:01:51
965000 -- [-10104.039] (-10118.243) (-10097.729) (-10118.473) * (-10104.278) (-10114.552) (-10112.555) [-10114.135] -- 0:01:48
Average standard deviation of split frequencies: 0.002521
966000 -- [-10104.162] (-10113.612) (-10108.224) (-10111.296) * [-10104.084] (-10117.733) (-10113.673) (-10113.592) -- 0:01:45
967000 -- [-10106.086] (-10119.277) (-10109.955) (-10109.175) * [-10107.161] (-10106.355) (-10118.740) (-10102.606) -- 0:01:42
968000 -- (-10119.617) (-10114.152) [-10102.551] (-10100.922) * (-10107.095) (-10111.410) [-10108.598] (-10107.672) -- 0:01:39
969000 -- [-10103.402] (-10107.473) (-10116.116) (-10110.023) * (-10111.138) (-10122.432) (-10117.623) [-10106.315] -- 0:01:36
970000 -- (-10121.188) [-10112.953] (-10106.420) (-10110.131) * (-10108.729) (-10117.995) (-10108.164) [-10107.102] -- 0:01:33
Average standard deviation of split frequencies: 0.002536
971000 -- [-10112.367] (-10120.669) (-10102.489) (-10108.215) * (-10109.981) [-10122.435] (-10105.401) (-10104.890) -- 0:01:30
972000 -- (-10108.506) (-10108.498) [-10111.856] (-10116.450) * (-10112.256) (-10109.666) [-10112.683] (-10114.637) -- 0:01:26
973000 -- (-10117.163) (-10109.457) (-10106.555) [-10103.756] * (-10116.979) [-10112.529] (-10115.138) (-10122.181) -- 0:01:23
974000 -- (-10107.210) (-10110.386) [-10094.121] (-10099.440) * [-10115.055] (-10100.418) (-10119.714) (-10106.602) -- 0:01:20
975000 -- (-10117.853) (-10111.412) (-10101.351) [-10109.686] * (-10109.316) (-10107.825) [-10110.592] (-10117.747) -- 0:01:17
Average standard deviation of split frequencies: 0.002576
976000 -- (-10110.171) (-10117.051) [-10107.070] (-10113.121) * (-10114.037) [-10108.565] (-10104.240) (-10111.914) -- 0:01:14
977000 -- [-10115.095] (-10112.230) (-10111.680) (-10113.440) * (-10113.717) (-10107.358) (-10118.447) [-10115.866] -- 0:01:11
978000 -- (-10115.218) (-10108.517) (-10112.762) [-10102.356] * [-10114.330] (-10111.056) (-10112.497) (-10116.133) -- 0:01:08
979000 -- (-10105.456) (-10112.947) [-10112.972] (-10141.462) * (-10099.114) (-10120.571) (-10112.890) [-10111.990] -- 0:01:05
980000 -- (-10101.782) (-10119.355) (-10106.451) [-10112.778] * (-10110.481) (-10102.351) [-10110.059] (-10103.926) -- 0:01:02
Average standard deviation of split frequencies: 0.002564
981000 -- (-10117.474) [-10105.357] (-10107.956) (-10129.505) * (-10111.240) [-10117.797] (-10105.025) (-10111.691) -- 0:00:58
982000 -- (-10107.659) (-10112.540) [-10111.825] (-10109.898) * [-10108.948] (-10112.262) (-10112.236) (-10099.281) -- 0:00:55
983000 -- (-10124.422) (-10111.413) (-10110.583) [-10110.297] * (-10103.853) (-10116.552) [-10095.777] (-10112.393) -- 0:00:52
984000 -- (-10110.611) (-10114.547) [-10108.171] (-10119.419) * (-10110.319) (-10110.156) [-10101.966] (-10102.869) -- 0:00:49
985000 -- (-10110.805) [-10100.603] (-10116.488) (-10107.633) * (-10108.796) [-10105.197] (-10103.098) (-10122.582) -- 0:00:46
Average standard deviation of split frequencies: 0.002523
986000 -- (-10111.351) (-10103.960) [-10111.635] (-10111.808) * (-10107.911) (-10112.389) (-10100.734) [-10119.259] -- 0:00:43
987000 -- (-10118.837) [-10105.950] (-10109.522) (-10101.893) * (-10102.705) (-10107.100) [-10108.996] (-10107.964) -- 0:00:40
988000 -- (-10114.834) (-10114.005) [-10098.622] (-10115.066) * (-10105.765) (-10101.013) [-10110.081] (-10122.786) -- 0:00:37
989000 -- (-10130.568) (-10114.612) (-10112.694) [-10111.186] * [-10103.233] (-10108.800) (-10101.037) (-10127.889) -- 0:00:34
990000 -- (-10111.742) (-10110.991) [-10109.061] (-10105.288) * (-10118.661) (-10109.843) [-10106.698] (-10114.431) -- 0:00:31
Average standard deviation of split frequencies: 0.002591
991000 -- (-10114.300) (-10116.127) [-10113.877] (-10107.658) * (-10113.097) [-10099.713] (-10109.422) (-10100.836) -- 0:00:27
992000 -- (-10110.408) (-10102.809) [-10101.686] (-10120.275) * (-10106.482) [-10105.877] (-10113.746) (-10103.016) -- 0:00:24
993000 -- (-10102.907) (-10112.305) [-10116.669] (-10120.307) * [-10099.556] (-10114.688) (-10105.469) (-10112.737) -- 0:00:21
994000 -- (-10111.338) (-10117.918) (-10120.462) [-10117.279] * [-10103.080] (-10120.141) (-10111.901) (-10119.281) -- 0:00:18
995000 -- [-10107.435] (-10110.510) (-10105.212) (-10115.375) * (-10112.522) (-10109.714) [-10102.615] (-10112.238) -- 0:00:15
Average standard deviation of split frequencies: 0.002498
996000 -- (-10111.667) [-10118.976] (-10102.677) (-10133.176) * (-10115.904) [-10112.156] (-10119.702) (-10108.735) -- 0:00:12
997000 -- (-10115.604) (-10106.991) (-10111.279) [-10109.339] * (-10121.254) (-10114.307) [-10110.871] (-10124.315) -- 0:00:09
998000 -- (-10115.246) (-10109.097) [-10105.897] (-10109.692) * (-10097.344) (-10107.444) [-10102.579] (-10116.450) -- 0:00:06
999000 -- [-10103.836] (-10107.650) (-10108.275) (-10111.186) * [-10107.450] (-10099.330) (-10108.337) (-10107.199) -- 0:00:03
1000000 -- (-10110.827) [-10120.565] (-10112.263) (-10105.265) * (-10100.918) (-10105.872) (-10117.738) [-10107.637] -- 0:00:00
Average standard deviation of split frequencies: 0.002408
Analysis completed in 51 mins 45 seconds
Analysis used 3101.78 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -10090.99
Likelihood of best state for "cold" chain of run 2 was -10090.44
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
23.9 % ( 30 %) Dirichlet(Revmat{all})
37.6 % ( 33 %) Slider(Revmat{all})
12.6 % ( 19 %) Dirichlet(Pi{all})
23.3 % ( 22 %) Slider(Pi{all})
25.4 % ( 23 %) Multiplier(Alpha{1,2})
40.4 % ( 20 %) Multiplier(Alpha{3})
29.0 % ( 19 %) Slider(Pinvar{all})
1.4 % ( 2 %) ExtSPR(Tau{all},V{all})
1.3 % ( 1 %) ExtTBR(Tau{all},V{all})
2.4 % ( 2 %) NNI(Tau{all},V{all})
2.7 % ( 3 %) ParsSPR(Tau{all},V{all})
26.1 % ( 22 %) Multiplier(V{all})
18.4 % ( 18 %) Nodeslider(V{all})
23.7 % ( 28 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
24.8 % ( 19 %) Dirichlet(Revmat{all})
37.1 % ( 20 %) Slider(Revmat{all})
12.8 % ( 19 %) Dirichlet(Pi{all})
23.2 % ( 27 %) Slider(Pi{all})
25.8 % ( 15 %) Multiplier(Alpha{1,2})
40.8 % ( 24 %) Multiplier(Alpha{3})
28.7 % ( 24 %) Slider(Pinvar{all})
1.4 % ( 2 %) ExtSPR(Tau{all},V{all})
1.2 % ( 2 %) ExtTBR(Tau{all},V{all})
2.3 % ( 0 %) NNI(Tau{all},V{all})
2.5 % ( 0 %) ParsSPR(Tau{all},V{all})
26.0 % ( 25 %) Multiplier(V{all})
18.5 % ( 20 %) Nodeslider(V{all})
23.9 % ( 32 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.72 0.49 0.32
2 | 166709 0.74 0.53
3 | 166419 167239 0.76
4 | 166176 167576 165881
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.72 0.49 0.32
2 | 166501 0.74 0.52
3 | 167459 166994 0.76
4 | 165937 166487 166622
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -10105.41
| 1 1 2|
|1 1 1 12 |
| 11 1 2 1 2 |
|2 21 1 * 1 12 1 1 * |
| 2 2 21 2 22 1 1 2 * |
| 1 1 2 1 22 22 |
| 1 12 1 1 12 1 1 21 |
| 12 *2 2 1 2* 11 2 2 2 2 1 |
| 2 2 2 1 2 1 222 1 * 1 2 |
| 2 2 2 1 2 1 2 * |
| 2 2 1 1 |
| 1 21 1 2 2 22 1 2 |
| 1 1 2 |
| 1 1 1 |
| 2 1|
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -10110.38
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -10098.86 -10119.43
2 -10100.15 -10120.03
--------------------------------------
TOTAL -10099.31 -10119.77
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 8.687563 0.435760 7.477423 10.005710 8.640192 737.07 808.18 1.000
r(A<->C){all} 0.170601 0.000163 0.147267 0.197089 0.170469 888.85 984.34 1.000
r(A<->G){all} 0.238437 0.000248 0.207277 0.269004 0.237967 802.04 843.64 1.000
r(A<->T){all} 0.122104 0.000119 0.101300 0.142942 0.121833 918.26 1022.84 1.000
r(C<->G){all} 0.086080 0.000109 0.066454 0.107081 0.085589 961.73 999.55 1.000
r(C<->T){all} 0.305885 0.000316 0.269984 0.339115 0.305291 692.04 792.90 1.000
r(G<->T){all} 0.076892 0.000092 0.058310 0.095025 0.076813 966.01 983.24 1.000
pi(A){all} 0.288514 0.000069 0.273773 0.306111 0.288548 953.69 1031.65 1.000
pi(C){all} 0.242936 0.000058 0.228072 0.257820 0.242763 803.05 980.35 1.000
pi(G){all} 0.226375 0.000074 0.208945 0.243050 0.226210 867.21 894.64 1.000
pi(T){all} 0.242175 0.000067 0.227779 0.259749 0.241964 665.07 893.79 1.000
alpha{1,2} 0.650006 0.003737 0.535275 0.770388 0.645502 949.36 1022.62 1.000
alpha{3} 6.903483 2.834787 3.869774 10.249880 6.692411 1293.37 1357.68 1.000
pinvar{all} 0.012859 0.000074 0.000000 0.029455 0.011227 1306.46 1314.86 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C11
4 -- C12
5 -- C13
6 -- C14
7 -- C15
8 -- C16
9 -- C17
10 -- C18
11 -- C19
12 -- C2
13 -- C3
14 -- C4
15 -- C5
16 -- C6
17 -- C7
18 -- C8
19 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
-------------------------
1 -- .******************
2 -- .*.................
3 -- ..*................
4 -- ...*...............
5 -- ....*..............
6 -- .....*.............
7 -- ......*............
8 -- .......*...........
9 -- ........*..........
10 -- .........*.........
11 -- ..........*........
12 -- ...........*.......
13 -- ............*......
14 -- .............*.....
15 -- ..............*....
16 -- ...............*...
17 -- ................*..
18 -- .................*.
19 -- ..................*
20 -- ..*............*...
21 -- .*..........*.*.***
22 -- ............*.*....
23 -- ...***.............
24 -- ...**..............
25 -- ......*..**........
26 -- .******..**.*.*****
27 -- ..****.........*...
28 -- .******.***********
29 -- .*................*
30 -- .******..**********
31 -- .*****......*.*****
32 -- .*...............**
33 -- .........**........
34 -- ...........*.*.....
35 -- .*..............***
36 -- ............*.*.*..
37 -- .*..........*.*..**
-------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
20 3002 1.000000 0.000000 1.000000 1.000000 2
21 3002 1.000000 0.000000 1.000000 1.000000 2
22 3002 1.000000 0.000000 1.000000 1.000000 2
23 3002 1.000000 0.000000 1.000000 1.000000 2
24 3002 1.000000 0.000000 1.000000 1.000000 2
25 3002 1.000000 0.000000 1.000000 1.000000 2
26 3002 1.000000 0.000000 1.000000 1.000000 2
27 3001 0.999667 0.000471 0.999334 1.000000 2
28 3001 0.999667 0.000471 0.999334 1.000000 2
29 3001 0.999667 0.000471 0.999334 1.000000 2
30 3000 0.999334 0.000942 0.998668 1.000000 2
31 2973 0.990340 0.002355 0.988674 0.992005 2
32 2926 0.974684 0.004711 0.971352 0.978015 2
33 2899 0.965690 0.005182 0.962025 0.969354 2
34 2797 0.931712 0.015546 0.920720 0.942705 2
35 2092 0.696869 0.002827 0.694870 0.698867 2
36 558 0.185876 0.003769 0.183211 0.188541 2
37 352 0.117255 0.006595 0.112592 0.121919 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.007890 0.000013 0.001646 0.015022 0.007300 1.000 2
length{all}[2] 0.003785 0.000010 0.000002 0.010084 0.002961 1.000 2
length{all}[3] 0.306472 0.001610 0.232234 0.390230 0.305148 1.000 2
length{all}[4] 0.001570 0.000003 0.000000 0.004834 0.001074 1.000 2
length{all}[5] 0.001527 0.000002 0.000000 0.004535 0.001044 1.000 2
length{all}[6] 0.102362 0.000504 0.059282 0.146668 0.101414 1.000 2
length{all}[7] 0.229317 0.001736 0.154387 0.317828 0.226653 1.003 2
length{all}[8] 0.007233 0.000012 0.001675 0.014269 0.006700 1.000 2
length{all}[9] 0.015665 0.000028 0.006131 0.026192 0.014923 1.000 2
length{all}[10] 0.128708 0.000432 0.086871 0.166927 0.128264 1.000 2
length{all}[11] 0.144529 0.000479 0.104854 0.188988 0.143392 1.000 2
length{all}[12] 0.001482 0.000002 0.000000 0.004508 0.001017 1.000 2
length{all}[13] 0.015852 0.000134 0.000007 0.038539 0.013825 1.000 2
length{all}[14] 0.001506 0.000002 0.000001 0.004439 0.001047 1.000 2
length{all}[15] 0.026609 0.000153 0.004128 0.050013 0.026609 1.000 2
length{all}[16] 0.225186 0.001266 0.155813 0.292409 0.224024 1.000 2
length{all}[17] 0.476102 0.006434 0.326064 0.641371 0.473383 1.000 2
length{all}[18] 0.233065 0.001506 0.157772 0.308008 0.231435 1.000 2
length{all}[19] 0.008617 0.000019 0.001039 0.017004 0.007940 1.000 2
length{all}[20] 0.190185 0.002349 0.102704 0.287565 0.188440 1.000 2
length{all}[21] 2.299943 0.161660 1.571983 3.075681 2.260289 1.000 2
length{all}[22] 1.104067 0.037926 0.763071 1.517875 1.101955 1.000 2
length{all}[23] 0.237035 0.002630 0.138819 0.337411 0.234325 1.000 2
length{all}[24] 0.145673 0.000614 0.098314 0.195681 0.145312 1.000 2
length{all}[25] 0.455766 0.007409 0.284585 0.616306 0.449443 1.000 2
length{all}[26] 0.771375 0.011430 0.571755 0.996378 0.765996 1.001 2
length{all}[27] 0.389775 0.016452 0.142952 0.636779 0.381653 1.000 2
length{all}[28] 0.013767 0.000025 0.004399 0.023470 0.013290 1.001 2
length{all}[29] 0.215088 0.001701 0.137265 0.294930 0.215171 1.000 2
length{all}[30] 0.077988 0.000379 0.040267 0.116473 0.078891 1.000 2
length{all}[31] 0.372233 0.014879 0.150993 0.618769 0.364080 1.000 2
length{all}[32] 0.189799 0.003839 0.076812 0.319827 0.187868 1.000 2
length{all}[33] 0.078563 0.001005 0.018227 0.140332 0.076458 1.002 2
length{all}[34] 0.021957 0.000270 0.000035 0.053978 0.018646 1.000 2
length{all}[35] 0.232508 0.014793 0.000588 0.445630 0.219456 1.001 2
length{all}[36] 0.106304 0.004882 0.000068 0.240692 0.090119 1.006 2
length{all}[37] 0.107135 0.005401 0.000005 0.250044 0.096809 0.999 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.002408
Maximum standard deviation of split frequencies = 0.015546
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.006
Clade credibility values:
/---------------------------------------------------------------------- C1 (1)
|
|---------------------------------------------------------------------- C16 (8)
|
| /-------- C10 (2)
| /--100--+
| | \-------- C9 (19)
| /--97--+
| | \---------------- C8 (18)
| /---70--+
| | \----------------------- C7 (17)
| /--100--+
| | | /-------- C3 (13)
| | \----------100---------+
| | \-------- C5 (15)
| |
+ /---99--+ /-------- C11 (3)
| | | /------100-----+
| | | | \-------- C6 (16)
| | | |
| | \------100------+ /-------- C12 (4)
| | | /--100--+
| /--100-+ | | \-------- C13 (5)
| | | \--100-+
| | | \---------------- C14 (6)
| | |
| | | /---------------- C15 (7)
| | | |
| /--100--+ \--------------100-------------+ /-------- C18 (10)
| | | \---97--+
| | | \-------- C19 (11)
| | |
\--100--+ | /-------- C2 (12)
| \----------------------93---------------------+
| \-------- C4 (14)
|
\-------------------------------------------------------------- C17 (9)
Phylogram (based on average branch lengths):
/ C1 (1)
|
| C16 (8)
|
| / C10 (2)
| /--+
| | \ C9 (19)
| /--+
| | \--- C8 (18)
| /--+
| | \------- C7 (17)
| /----------------------------------+
| | | / C3 (13)
| | \----------------+
| | \ C5 (15)
| |
+ /-----+ /---- C11 (3)
| | | /--+
| | | | \--- C6 (16)
| | | |
| | \-----+ / C12 (4)
| | | /--+
|/-----------+ | | \ C13 (5)
|| | \--+
|| | \-- C14 (6)
|| |
|| | /---- C15 (7)
|| | |
|+ \------+/-- C18 (10)
|| \+
|| \--- C19 (11)
||
||/ C2 (12)
|\+
| \ C4 (14)
|
\ C17 (9)
|--------------| 1.000 expected changes per site
Calculating tree probabilities...
Credible sets of trees (41 trees sampled):
90 % credible set contains 5 trees
95 % credible set contains 9 trees
99 % credible set contains 20 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
Running FUBAR...
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\
***************** TYPES OF STANDARD ANALYSES *****************
(1) Selection Analyses
(2) Evolutionary Hypothesis Testing
(3) Relative evolutionary rate inference
(4) Coevolutionary analysis
(5) Basic Analyses
(6) Codon Selection Analyses
(7) Compartmentalization
(8) Data File Tools
(9) Miscellaneous
(10) Model Comparison
(11) Kernel Analysis Tools
(12) Molecular Clock
(13) Phylogeny Reconstruction
(14) Positive Selection
(15) Recombination
(16) Selection/Recombination
(17) Relative Rate
(18) Relative Ratio
(19) Substitution Rates
Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' *****************
(1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution).
(2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood).
(3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting).
(4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection).
(5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification).
(6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood).
(7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation).
Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types):
Analysis Description
--------------------
Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a
coding sequence alignment to determine whether some sites have been
subject to pervasive purifying or diversifying selection. v2.1
introduces two more methods for estimating the posterior distribution of
grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation
Bayes approximation (fastest). Please note that a FUBAR analysis
generates a cache and a results JSON file in the same directory as
directory as the original alignment. HyPhy needs to have write
privileges to this directory. For example if the original file is in
/home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there
will also exist FUBAR-generated files
/home/sergei/FUBAR/data/pol.nex.FUBAR.json,
/home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide
checkpointing so that a partially completed analysis can be restarted.
- __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree
(one per partition)
- __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring
selection (2013), Mol Biol Evol. 30(5):1196-205
- __Written by__: Sergei L Kosakovsky Pond
- __Contact Information__: spond@temple.edu
- __Analysis Version__: 2.1
####Choose Genetic Code
1. [**Universal**] Universal code. (Genebank transl_table=1).
2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2).
3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3).
4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4).
5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5).
6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6).
7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9).
8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10).
9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12).
10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13).
11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14).
12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15).
13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16).
14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21).
15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22).
16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23).
17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24).
18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25).
19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26).
>Please choose an option (or press q to cancel selection):
>Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`)
>A tree was found in the data file: `(C1,C16,((((((((C10,C9),C8),C7),(C3,C5)),((C11,C6),((C12,C13),C14))),(C15,(C18,C19))),(C2,C4)),C17))`
>Would you like to use it (y/n)?
>Loaded a multiple sequence alignment with **19** sequences, **549** codons, and **1** partitions from `/data//pss_subsets/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result/original_alignment/fubar/results/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1.fna`
> FUBAR will write cache and result files to _/data//pss_subsets/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result/original_alignment/fubar/results/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result/original_alignment/fubar/results/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1.fna.FUBAR.json_, respectively
> Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer):
####Posterior estimation method
1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation)
2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed)
3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default)
>Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5):
### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model
* Log(L) = -16301.86, AIC-c = 32689.84 (43 estimated parameters)
* Tree length (expected substitutions/site) for partition 1 : 4.255
### Computing the phylogenetic likelihood function on the grid
* Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid
* Best scaling achieved for
* synonymous rate = 2.815
* non-synonymous rate = 0.643
* Computing conditional site likelihoods on a 20 x 20 rate grid
### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights
* Using the following settings
* Dirichlet alpha : 0.5
### Tabulating site-level results
| Codon | Partition | alpha | beta |Posterior prob for positive selection|
|:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:|
| 261 | 1 | 0.614 | 3.812 | Pos. posterior = 0.9726 |
----
## FUBAR inferred 1 sites subject to diversifying positive selection at posterior probability >= 0.9
Of these, 0.03 are expected to be false positives (95% confidence interval of 0-1 )
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.09 sec, SCORE=999, Nseq=19, Len=549
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus -MSDNGTQNQRSASR-ITFGGPSDSTDNNQDGGRSGARPKQR--------
Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus MSDNGPQPSQRSAPR-ITFGGPTDSIDNNQNGGRNGARPKQR--------
Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus -------------MSSVKFE-------------ASGRTGRTP--------
Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus MSDNGPQPSQRSAPR-ITFGGPTDSIDNNQNGGRNGARPKQR--------
Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus -------------MSSVKFE-------------ASGRTGRTP--------
BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus MSGRNKPRSGTSTPK-VTFKQESDGSD-SESERRASIRPKNK-------G
BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus -------------MASVSFE------------QQRGRSGRVP--------
BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus -------------MASVSFD-----------DQPRGRGGRMP--------
BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus -------------MASVSFD-----------DQSRGRSGRVP--------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus0 -------------MASVSFD-----------DQSRGRSGRVP--------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus1 MSGRNRSRPGTPSPK-VTFKQESDGSD-SESDRRNGNRTGARSKNNNGRS
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus2 MSGRRTPR---NQPQ-VSFKNESD-SD-SESGARSQSRGRNSNNNNNGGN
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus3 MSGRRTPR---NQPQ-VSFKNESD-SD-SESGARSQSRGRNSNNNNNGGN
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus4 MSGRRTPR---NQPQ-VSFKNESD-SD-SESGQRSQSRGRNPNNNNNGGN
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus5 -------MATPAAPRTISFA---DNND-NQTNQQQRGRGRNP--------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus6 -MSDNGTQNQRSASR-ITFGGPSDSTDNNQDGGRSGARPKQR--------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus7 -MSDNGPQNQRSAPR-ITFGGPSDSTDNNQDGGRSGVRPKQR--------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus8 -------MATPAAPRAVSFA---DNND-NSNNNQSRGRGRNP--------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus9 -------MATPAAPRAVTFG---DNNDNNTNTQQSRGRGRTP--------
:.*
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG
Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus ----------RPQGLPNNTASWFTALTQHGKEEL-RFSRGQGVPINTNSG
Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus -------------------LSYFAPITVTSGKNLWNVLPKNAVPSGKG-K
Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus ----------RPQGLPNNTASWFTALTQHGKEEL-RFSRGQGVPINTNSG
Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus -------------------LSYFAPITVTSGKNLWNVLPKNAVPSGKG-K
BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus ----SSFKPEKPKAAPPQNVSWFAPLVQTGKNDL-RFPRGQGVPISQGVD
BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus -------------------LSFFYPVIVTDNTPFWKVMPNNAVPNGMG-T
BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus -------------------LSYYYPIMVTDGKPLFKVLQSNAVPTGKG-T
BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus -------------------LSFYNPVMVTDDKPLFKVMPHNAVPTGKG-N
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus0 -------------------LSFYNPVMVTDDKPLFKVMPHNAVPTGKG-N
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus1 ----SAPRPEKPKAAPLQNVSWFAPLVQTGKSEL-RFARGEGVPVSQGVD
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus2 GGARRKDKPEKPRAAPAQNVSWFLPIVQTGKQDL-RFARGEGVPVSQGVD
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus3 GGARRKDKPEKPRAAPAQNVSWFLPIVQTGKQDL-RFARGEGVPVSQGVD
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus4 GGARRKDKPEKPRAAPQQNVSWFLPLVQTGKNDL-RFPRGQGVPITQGVD
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus5 ----------KPRPAPNNTVSWYTGLTQHGKNPL-AFPPGQGVPLNANST
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus6 ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus7 ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus8 ----------KPRPAPNNTVSWYTGLTQHGKVSL-SFPPGQGVPLNANST
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus9 ----------KPRPAPNNTVSWYTGLTQHGKVPL-SFPPGQGVPLNANST
*:: : . : . :.** .
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus RDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus PDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus ANQQVGYWSEQTR-WKMQKGERVEKPSFWHFYFLGTGPHADAKFRERIQG
Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus PDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus ANQQVGYWSEQTR-WKMQKGERVEKPSFWHFYFLGTGPHADAKFRERIQG
BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus PVYNHGYWLRTQRSFQKG-GKLVQANPRWYFYYTGTGRYGDMRYGTKNPD
BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus KDERIGYWNEQKR-WRMRKGQRIDLPSKWHFYFLGTGPHKEASFRQRLDG
BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus KEQQIGYWNMQAR-WRMVKGVRKDLDPKWHFYYLGTGPHADAPFRQRLEG
BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus KSQQIGYWNMQPR-WRMVKGQRKDLTPKWHFYYLGTGPHAEAPFRQKLDG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus0 KSQQIGYWNMQPR-WRMVKGQRKDLTPKWHFYYLGTGPHAEAPFRQKLDG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus1 PTYEHGYWLRTQRSFQKG-GKQVLANPRWYFYYTGTGRFGDLRFGTKNPD
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus2 ITYQHGYWLRRQRTFNKG-GKQVQANPRWFFYYTGTGPYEGLRYGSRNND
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus3 ITYQHGYWLRRQRTFNKG-GKQVQANPRWFFYYTGTGPYEGLRYGSRNND
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus4 PTFQHGYWLFRQRSFQKG-GKQVMANPRWYFYYTGTGPYEGLRYGSKSND
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus5 TAQNAGYWRRQDRKINTGNGVK-QLSPRWFFYYTGTGPEANLPFRSVKDG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus6 TDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus7 RDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus8 PAQNAGYWRRQDRKINTGNGTK-SLAPRWYFYYTGTGPEANLPFRAVKDG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus9 PAQNAGYWRRQDRKINTGNGTK-QLAPRWFFYYTGTGPEANLPFRAVKDG
. **: * . * . *.**: *** : .
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus IVWVAIEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG
Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus IVWVATEGALNTPKDHIGTRNPNNNAATV---LQLPQGTTLP-KGFYAEG
Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus VVWVSKANADLKP-TDLGTRSKARSLIIPKFDIELPDDIEIV-DKSSAPN
Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus IVWVATEGALNTPKDHIGTRNPNNNAATV---LQLPQGTTLP-KGFYAEG
Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus VVWVSKANADLKP-TDLGTRSKARSLITPKFDIELPDDIEIV-DKSSAPN
BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus LIWVGEEGANVNRVGDMGTRNPNNDGAIS---VQLHDG--IP-KGFYAEG
BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus VYWVAVNGAKTQP-TSLGSRKKSAAMMVPQFSVSLPSNIQVQTENASAPA
BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus VFWVAVQGSKTEP-TGLGVRKRNAPLLKPQFSFKLPVNVEIQEDSASRPN
BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus VFWVAVQGSDTQP-TGLGVRKRNQPLIKPQFAVKLPANIEIQEENASKPN
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus0 VFWVAVQGSDTQP-TGLGVRKRNQPLIKPQFAVKLPANIEIQEENASKPN
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus1 IVWVGQEGANINRLGDMGTRNPSNDSAIP---VQLTGG--IP-KGFYAEG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus2 IIWVGNEGANVNRLGDMGTRNPANDAGIP---VQLAEG--IP-KGFYAEG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus3 IIWVGNEGANVNRLGDMGTRNPANDAGIP---VQLAEG--IP-KGFYAEG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus4 LIWVGNEGANVNRIGDMGTRNPANDAGLV---VQLADG--IP-KGFYAEG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus5 IVWVYEEGATDAP-SVFGTRNPANDAAIV---CQFAPGTLIP-KNFHIEG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus6 IVWVATEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus7 IVWVATEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus8 IIWVHEDGATDAP-STFGTRNPNNDAAIV---TQFAPGTKLP-KNFHIEG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus9 IVWVHEEGATDAP-STFGTRNPNNDAAIV---TQFAPGTKLP-KNFHIEG
: ** .: :* *. .: . : .
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus SRSGSQASSR-----SSSRSRGNSRTSTPG--------------------
Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus SRGGSQASSR-----SSSRSRGNSRNSTPG--------------------
Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus SRGNSRSQSRGAKSGSKSRGNSQTRDNSKS-RDNSNNRGKSQSRNNSRSR
Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus SRGGSQASSR-----SSSRSRGNSRNSTPG--------------------
Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus SRGNSRSQSRGAKSGSKSRGNSQTRDNSKS-RDNSNNRGKSQSRNNSRSR
BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus RNSRSNSRNS-----SRNSSRASSQGNSRA--------------------
BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus SRNQSQNR-------SQSANRSQSRGPNQNVNQNQ----------NTNGN
BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus SRNPSSNRDR-----SQSGNRSASSGPKQGNSQNQ---NNSSQGNNSNNQ
BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus SRNPSTNRDR-----SQSGNRSASRGPQQGNTQNQNQNNNSSKGNQNNNQ
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus0 SRNPSTNRDR-----SQSGNRSASRGPQQGNTQNQNQNNNSSKGNQNNNQ
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus1 RGSRGNSRSS-----SRNSSRASSRGNSRA--------------------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus2 RNSRGNSRNS-----SRSSSRGSSNANSRN--------------------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus3 RNSRGNSRNS-----SRSSSRGSSNANSRN--------------------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus4 RNSRGNSRNS-----SRSSSRGSSNANSRN--------------------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus5 TGGNSQSSSR-----ASSNSRNSSRSNSRG----------------GRST
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus6 SRSGSQASSR-----SSSRSRGNSRTSTPG--------------------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus7 SRNGSQASSR-----SSSRSRGNSRTSTPG--------------------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus8 TGGNSQSSSR-----ASSASRNSSRSNSRG----------------SRSG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus9 TGGNSQSSSR-----ASSASRGSSRSSSRG----------------ARSG
. . : . .. :
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG
Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus -SSRGNSPARMASGGGE----TALALLLLDRLNQL---------ESKVSG
Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus GQQRNNNQQRQGSGNAGNNT-ADLAAAIVLALEKAGLARDT---EKAPKK
Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus -SSRGNSPARMAIGGGE----TALALLLLDRLNQL---------ESKVSG
Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus GQQRNNNQQRQGSGNAGNNT-ADLAAAIVLALEKAGLARDT---EKAPKK
BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus -GSRNASPGRNAPNVASGN--EPWMAYLVQKLEAL---------ENKVNG
BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus QRARSQSRNRGSNNNQPQNQ-VDIVAAVKAALQQLGVGNQNQGGTGKKSK
BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus QRSRNNSKSRGQNNQSNNSQ-ADIVAAVKQALKELGVSPQEK--KNKQKG
BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus QRSRNNSKSRSQNNSQPQNQQVDIVAAVKQALKELGVSPQEK--KQKQKG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus0 QRSRNNSKSRSQNNSQPQNQQVDIVAAVKQALKELGVSPQEK--KQKQKG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus1 -GSRGASPGRPAATPSA----EPWMAYLVQKLEKL---------ESQVNG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus2 -QSRSNSPGRGSAPPSGG---EPWMAYLIQKLENL---------EQRVDG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus3 -QSRSNSPGRGSAPPSGG---EPWMAYLIQKLENL---------EQRVDG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus4 -QSRSNSPGRGSAPPSGS---EPWMAYLIQKLENL---------EQRVDG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus5 SNSRGTSPVSHGVGSAESLAALPLLLDLQKRLADL------------ESG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus6 -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus7 -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus8 NSSRGTSPGPSGVGAVGG---EMLYLDLLNRLQAL------------ESG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus9 NSSRSASPGPAGIGAVGGDASSILYLSLLKRLEDL------------EAG
*. . : *
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG
Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus KG--QQQGQTVTKKSAAEASKKPRQ-------KRTATKQYNVTQAFGRRG
Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus ESPNNNKKQKSRASSPAPAQSKNTDQLTKVVWKRVPDPSCNVKQCF---G
Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus KG--QQQGQTVTKKSAAEASKKPRQ-------KRTATKQYNVTQAFGRRG
Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus ESPNNNKKQKSRASSPAPAQSKNTDQLTKVVWKRMPDPSCNVKQCF---G
BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus PKE-TKKPVQVTKNEAAANAKKLRH-------KRTPHKGSGVTTNYGRRG
BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus SNSGVNTPKEQRAKSPAKTPPVQRKQMERPVWKRVPNSSENVTACF---G
BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus STSGNNTPKEQRSKSPAPSPNTQRKQIERPVWKRVPTSAEDVTVCF---G
BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus NTSGNNTPKEQRAKSPARSPSSPRKQLERPVWKRVPTEAENVTQCF---G
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus0 NTSGNNTPKEQRAKSPARSPASPRKQLERPVWKRVPTEAENVTQCF---G
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus1 TKPVTKNPLQVTKNEAAANAKKLRH-------KRTAHKGSGVTMNYGRRG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus2 KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNATQNYGRRG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus3 KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNATQNYGRRG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus4 KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNVTQNYGRRG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus5 K---SKQPKVVTKKDASAAKNKMRH-------KRVATKNFNVTQAFGLRG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus6 KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus7 KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus8 KTK-QAQPKVITKKDAVAAKNKMRH-------KRVATKGFNMVQAFGLRG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus9 KS--KSAPKVVTKKDAAAAKNKMRH-------KRVATKSFNMVQAFGRRG
. . . ** . . : *
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus PEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus PRSTYQNFGDEDAVEKGVRAKHYPSWAELTPTTAALLFGGEVMTVEDGED
Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus PEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus PRSTYQNFGDEEAVEKGVRAKHYPSWAELTPNTAALLFGGEVMTVEDGED
BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus PGDLEGNFGDLNMLKLGTDDSRFPAAAQMAPNVASFLFMSHFSVREENDA
BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus PRDAVHNFGDSDVVHHGTDAKHWPQLAELIPTPAALAFGSEISTTEVGDK
BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus PRDTQQNFGDQDLVRHGVDAKHYPQLAEFVPGTAALLFGGEVSTRESGED
BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus PRDTLRNFGDRELTLRGVEAKNYPQIAEFVPTPAALLFGGEVSTREAGED
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus0 PRDTLRNFGDRELTLRGVEAKNYPQIAEFVPTPAALLFGGEVSTREAGED
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus1 PGDLEGNFGDLDMLKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTREEGDA
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus2 PGNLEGNFGDQEFLKLGTDDPRFPVVAQMAPNTSSFVFMSHFTPRYEADA
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus3 PGNLEGNFGDQEFLKLGTDDPRFPVVAQMAPNTSSFVFMSHFTPRYEADA
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus4 PGNLEGNFGDQDFLKLGTDDPRFPVVAQMAPNTSSFVFMSQFTPRYESDA
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus5 PGPLQGNFGDMNYNKFGTEDPRWPQMAELAPSASAFMSMSQFKLTHQSND
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus6 PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus7 PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus8 PGDLQGNFGDLQLNKLGTEDPRWPQIAELAPSASAFIGMSQFKLTHQSND
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus9 PGDLQGNFGDLQLNKLGTEDPRWPQIAELAPSASAFMGMSQFKLTHQSND
* **** : *. .:. *:: * ::: ... .
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus I------VIQYTYQMRVPKTTPALQTFL----PQVSAFAN-----SGGDD
Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus I------VIQYTYQMRVPKTTPALQTFL----PQVSAFAN-----ASGDD
BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus L------WLHYKGAIKLPKDDPNYDQWTKILGENLNAYKNFPPVEPKKDK
BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus V------EITYTYKMKVDKADKNLPAFL----QQVSAYAQ-----P----
BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus V------EITFHYKLKVKKSDKNLPLFL----QQVSAYAL-----P----
BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus V------EITFHYKMKVKKDDKNLPLFL----QQVSAYAL-----P----
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus0 V------EITFHYKMKVKKDDKNLPLFL----QQVSAYAL-----P----
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus1 M------WLHYKGAIKLPKDDPNYDQWTKILAENLNAYRDFPPPAPKKDK
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus2 L------WLDYTGSIKLPRDDPNFPQWEKLLAENIDAYKSFPPPKPKSDK
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus3 L------WLDYTGSIKLPRDDPNFPQWEKLLAENIDAYKSFPPPKPKSDK
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus4 L------WLDYTGSIKLPRDDPNFPQWEKLLAENLDAYKSFPPPKPKSDK
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus5 DKGEPIYFLSYSGAIKLDPKNPNYKKWLELLEANIDAYKTF----PKKER
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus6 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus7 T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus8 TDGAPVYFLRYSGAIKLDPKNPNYNKWLELIEQNVDAYKTF----PKKEK
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus9 ADGSPVYFLRYSGAIKLDPKNPNYQKWMELLEANIDAYKSF----PVKEK
: : ::: ::.*: .
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus KKKTDEA-------------------------------------------
Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus KKKTDEA-------------------------------------------
Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus ASESGQD------------------------------------MPVVTSA
Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus KKKTDEA-------------------------------------------
Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus ESESGQE------------------------------------MPVVTSA
BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus KKKEEAS--VEVAVYEDAATGTDQPIVQKIWVKDDGVQTDDEWIGGDDTV
BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus --------------------------------------------------
BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus --------------------------------------------------
BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus --------------------------------------------------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus0 --------------------------------------------------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus1 KKKEETT--QETVIFEDASTGTDQP-VVKVWVKDQDAQTDDEWLGGDETV
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus2 KKKSDKSDSAAGPSEDLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus3 KKKSDKSDSAAGPSEDLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus4 KKKSDKSDSATGPSADLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus5 KPKTTED---------------------------------GASASSSASQ
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus6 KKKTDEA-------------------------------------------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus7 KKKTDEA-------------------------------------------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus8 KQKAPKE-------------------------------------------
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus9 KQKADDN-----------------------------KQDSTEDSGDLFAE
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus ----QPLPQR-KKLPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA
Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus ----QPLPQRQKKQPIVTLLPAADMDD---FSRQLQNSMSGASADSTQA
Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus AESAAPAPASTPKLNPRAETFVPPKVDPNYFAGMKVEIMNKTISDDSTV
Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus ----QPLPQRQKKQPIVTLLPAADMDD---FSRQLQNSMSGASADSTQA
Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus AESAAPAPAPTPKLNPKAETFVPPKVDPNYFAGMKVEIMNKTISDDSTV
BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus YEEEDDKPKAQRRHKKRASTASR--VT----------VADPTNLANERS
BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus ----SQANQISSQLNPVAPVFTPGMDD-------SVEIIDQVFDTDV--
BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus ----SQAPNIPSQLNPIAPDFTPGFEM----VNETVEIIDQVYDTPDA-
BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus ----SQAPNVPSQLNPVAPDFTPSGVE---MVNETVEIIDQVYDSFDA-
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus0 ----SQAPNVPSQLNPVAPDFTPSGVE---MVNETVEIIDQVYDSFDA-
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus1 YEEEDDRPKTQRRHKKRGSTASR--VT----------IADPTNAGAERS
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus2 YEDENDKPKAQRRQSIKKRNATHQRHV----------SIDGAAQSSA--
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus3 YEDENDKPKAQRRQSIKKRNATHQRHV----------SIDGAAQSSA--
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus4 YEDENDKPKAQRRQSIKKRNAQRHV------------SIDGSAQSSA--
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus5 MEDVDAKPQRKPKSRVAGSITMRSGSS--------PALQDVNFDSEA--
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus6 ----QPLPQR-KKQPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus7 ----QPLPQRQKKQPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus8 EPSDQMNVQPPKEQRVQGSITQRSRTP-------RPSVQPGPMTDVNTD
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus9 VVASAMASQSQPQRAPKGSITQRSRAP-----RAPVSQMEDVNQTDDRQ
.
>16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus ---ATGTCTGATAATGGAACCCAAAACCAACGTAGTGCCTCCCGC---ATTACATTTGGTGGACCTTCAGATTCAACTGACAATAACCAGGATGGAGGACGCAGTGGTGCACGGCCAAAACAACGC------------------------------------------------------CGACCCCAGGGTTTACCCAATAATACTGCATCTTGGTTCACAGCTCTCACTCAGCATGGTAAGGAAGGACTC---AAATTCCCTCAAGGCCAGGGAGTTCCTATCAACACCAATAGTGGCAGAGATGACCAAATTGGCTACTATAGAAGAGCCACCCGACGAGTTCGTGGTGGTGACGGTAAAATGAAAGAGCTCAGCCCCAGATGGTACTTCTATTACCTAGGAACTGGCCCAGAAGCTTCACTTCCCTATGGTGCCAATAAAGAAGGCATCGTATGGGTTGCAATTGAGGGTGCCTTGAACACACCAAAAGATCATATTGGCACCCGCAATCCTAATAACAATGCTGCCATTGTT---------CTACAACTTCCTCAAGGAACAACATTGCCA---AAAGGCTTCTACGCTGAAGGGAGCAGGAGTGGTAGTCAAGCCTCTTCTCGC---------------TCCTCATCACGTAGTCGTGGAAATTCAAGAACTTCAACTCCTGGC---------------------------------------------------------------AGCAGTAGGGGAAATTCTCCTGCTCGAGTGGCTAGCGGAGGTGGTGAA------------ACTGCCCTCGCGCTATTGCTGTTAGACAGATTGAACCAGCTG---------------------------GAGAGCAAAGTTTCTGGTAAAGGCCAA---CAACAACAAGGCCAAACTGTCACTAAGAAATCTGCTTCAGAGGCATCTAAAAAGCCTCGGCAA---------------------AAACGTACCGCAACCAAACAGTACAATGTCACCCAAGCTTTTGGGCGACGTGGTCCAGATCAAACTCAAGGAAACTTTGGAGACCAGGAGCTAATCAGACAAGGAACTGATTATAAACACTGGCCGCAAATAGCACAGTTTGCTCCAAGTGCCTCTGCATTCTTCGGAATGTCACGCATTGGCATGGAAGTCACACCTTCGGGAACA------------------TGGCTGACTTATCATGGAGCCATTAAATTGGATGATAAAGATCCCCAATTTAAAGACAACGTCATACTGCTGAATAAGCACATTGACGCATACAAGACATTCCCACCAACAGAGCCTAAAAAGGACAAAAAGAAAAAGACTGATGAAGCT---------------------------------------------------------------------------------------------------------------------------------------------CAGCCTTTGCCGCAGAGA---AAGAAACTGCCCACTGTGACTCTTCTGCCTGCGGCTGATATGGATGAT---------TTCTCCAGACAACTTCAAAATTCCATGAGTGGAGCTTCTGCTGATTCAACTCAGGCA >Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus ATGTCTGATAATGGACCCCAACCAAGCCAACGTAGTGCCCCCCGC---ATTACATTTGGTGGACCCACAGATTCAATTGACAATAACCAGAATGGAGGACGCAATGGGGCAAGGCCAAAACAACGC------------------------------------------------------CGACCCCAAGGTTTACCCAATAATACTGCGTCTTGGTTCACAGCTCTCACTCAGCATGGCAAGGAGGAACTT---AGATTCTCTCGAGGCCAGGGCGTCCCTATCAACACCAATAGTGGTCCAGATGACCAAATTGGCTACTACCGAAGAGCTACCCGACGAGTTCGTGGTGGTGACGGCAAAATGAAAGAGCTCAGCCCCAGATGGTACTTCTATTACCTAGGAACTGGCCCAGAAGCTTCACTTCCCTACGGCGCTAACAAAGAAGGCATCGTATGGGTCGCAACTGAGGGAGCCTTGAACACACCTAAAGATCACATTGGCACCCGCAATCCTAATAACAATGCTGCCACCGTG---------CTACAACTTCCTCAAGGAACAACATTGCCA---AAAGGCTTCTACGCAGAAGGGAGCAGAGGCGGCAGTCAAGCCTCTTCTCGC---------------TCCTCATCACGTAGTCGCGGTAATTCAAGAAATTCGACTCCTGGC---------------------------------------------------------------AGCAGTAGGGGAAATTCTCCTGCTCGAATGGCTAGCGGAGGTGGTGAA------------ACTGCCCTCGCGCTATTGCTGCTAGACAGATTGAACCAGCTT---------------------------GAGAGCAAAGTTTCTGGTAAAGGC------CAACAACAAGGCCAAACTGTCACTAAGAAATCTGCTGCTGAGGCATCCAAAAAGCCTCGCCAA---------------------AAACGTACTGCTACAAAACAGTACAACGTCACTCAAGCATTTGGGAGGCGTGGTCCAGAACAAACCCAAGGAAACTTTGGGGACCAAGAACTAATCAGACAAGGAACTGATTACAAACATTGGCCGCAAATTGCACAATTTGCTCCAAGTGCATCTGCATTCTTCGGAATGTCACGCATTGGCATGGAAGTCACACCTTCGGGAACA------------------TGGCTGACTTATCATGGAGCCATTAAATTGGATGATAAAGATCCACAATTCAAAGACAACGTCATATTGCTGAATAAGCACATTGACGCATACAAAACATTCCCACCAACAGAGCCTAAAAAGGACAAAAAGAAAAAGACTGATGAAGCT---------------------------------------------------------------------------------------------------------------------------------------------CAGCCTTTACCGCAGAGACAAAAGAAGCAGCCCATTGTGACTCTTCTTCCTGCGGCTGACATGGATGAT---------TTCTCCAGACAACTTCAAAATTCCATGAGTGGAGCTTCTGCTGATTCAACTCAGGCA >Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus ---------------------------------------ATGAGCTCTGTCAAATTTGAG---------------------------------------GCCTCTGGTCGCACTGGCAGAACTCCT---------------------------------------------------------------------------------CTCTCCTATTTTGCCCCTATAACAGTTACCTCTGGGAAAAATCTTTGGAACGTCCTCCCTAAAAATGCAGTCCCATCTGGAAAAGGA---AAGGCCAACCAGCAGGTTGGATACTGGTCCGAACAAACCAGA---TGGAAGATGCAGAAGGGAGAGCGGGTTGAGAAGCCTTCTTTCTGGCACTTCTACTTTCTTGGTACCGGCCCTCACGCTGATGCCAAGTTTAGAGAGCGCATCCAAGGTGTGGTGTGGGTTAGCAAAGCGAATGCTGACCTTAAACCG---ACTGACCTTGGAACCAGATCTAAGGCTAGAAGTCTCATTATTCCAAAATTTGACATTGAGTTGCCTGACGATATTGAAATCGTC---GACAAGTCCTCTGCACCAAATTCGCGGGGAAATTCGCGTAGCCAGAGCAGAGGTGCAAAGAGCGGTTCGAAGAGTCGCGGCAACTCCCAGACACGTGACAACTCCAAGTCT---CGTGACAATTCCAATAACAGAGGAAAATCTCAGTCTCGTAATAACTCACGCAGTCGCGGACAGCAGCGTAATAACAACCAGCAACGCCAGGGCTCTGGTAACGCAGGTAATAACACT---GCTGACCTCGCTGCCGCAATTGTGCTGGCCCTTGAAAAAGCTGGTCTTGCAAGAGACACT---------GAGAAGGCTCCTAAAAAGGAGAGTCCTAATAATAATAAAAAACAGAAGTCCAGAGCAAGTTCTCCTGCTCCAGCTCAGTCCAAGAACACAGACCAACTGACTAAGGTTGTGTGGAAACGCGTACCTGACCCCAGTTGCAATGTGAAACAATGCTTT---------GGACCACGCTCTACTTACCAGAACTTCGGCGACGAAGATGCTGTTGAGAAAGGTGTGCGTGCCAAGCACTATCCATCATGGGCTGAACTGACACCAACTACTGCTGCACTGCTTTTCGGCGGTGAAGTAATGACGGTTGAGGATGGTGAGGATATC------------------GTCATCCAATATACCTACCAAATGAGAGTGCCGAAAACAACACCGGCTCTCCAGACATTCCTG------------CCACAGGTGAGCGCCTTTGCCAAT---------------TCTGGCGGAGATGATGCATCTGAGTCTGGACAGGAC------------------------------------------------------------------------------------------------------------ATGCCAGTTGTTACAAGTGCTGCCGAAAGCGCTGCACCTGCACCAGCTTCTACACCAAAACTCAATCCCAGAGCCGAGACCTTTGTGCCGCCTAAAGTTGACCCCAACTATTTCGCAGGCATGAAGGTTGAGATCATGAACAAAACTATCTCAGATGACAGTACGGTT >Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus ATGTCTGATAATGGACCCCAACCAAGCCAACGTAGTGCCCCCCGC---ATTACATTTGGTGGACCCACAGATTCAATTGACAATAACCAGAATGGAGGACGCAATGGGGCAAGGCCAAAACAACGC------------------------------------------------------CGACCCCAAGGTTTACCCAATAATACTGCGTCTTGGTTCACAGCTCTCACTCAGCATGGCAAGGAGGAACTT---AGATTCTCTCGAGGCCAGGGCGTCCCTATCAACACCAATAGTGGTCCAGATGACCAAATTGGCTACTACCGAAGAGCTACCCGACGAGTTCGTGGTGGTGACGGCAAAATGAAAGAGCTCAGCCCCAGATGGTACTTCTATTACCTAGGAACTGGCCCAGAAGCTTCACTTCCCTACGGCGCTAACAAAGAAGGCATCGTATGGGTCGCAACTGAGGGAGCCTTGAACACACCTAAAGATCACATTGGCACCCGCAATCCTAATAACAATGCTGCCACCGTG---------CTACAACTTCCTCAAGGAACAACATTGCCA---AAAGGCTTCTACGCAGAAGGGAGCAGAGGCGGCAGTCAAGCCTCTTCTCGC---------------TCCTCATCACGTAGTCGCGGTAATTCAAGAAATTCGACTCCTGGC---------------------------------------------------------------AGCAGTAGGGGAAATTCTCCTGCTCGAATGGCTATCGGAGGTGGTGAA------------ACTGCCCTCGCGCTATTGCTGCTAGACAGATTGAACCAGCTT---------------------------GAGAGCAAAGTTTCTGGTAAAGGC------CAACAACAAGGCCAAACTGTCACTAAGAAATCTGCTGCTGAGGCATCCAAAAAGCCTCGCCAA---------------------AAACGTACTGCTACAAAACAGTACAACGTCACTCAAGCATTTGGGAGGCGTGGTCCAGAACAAACCCAAGGAAACTTTGGGGACCAAGAACTAATCAGACAAGGAACTGATTACAAACATTGGCCGCAAATTGCACAATTTGCTCCAAGTGCATCTGCATTCTTCGGAATGTCACGCATTGGCATGGAAGTCACACCTTCGGGAACA------------------TGGCTGACTTATCATGGAGCCATTAAATTGGATGATAAAGATCCACAATTCAAAGACAACGTCATATTGCTGAATAAGCACATTGACGCATACAAAACATTCCCACCAACAGAGCCTAAAAAGGACAAAAAGAAAAAGACTGATGAAGCT---------------------------------------------------------------------------------------------------------------------------------------------CAGCCTTTACCGCAGAGACAAAAGAAGCAGCCCATTGTGACTCTTCTTCCTGCGGCTGACATGGATGAT---------TTCTCCAGACAACTTCAAAATTCCATGAGTGGAGCTTCTGCTGATTCAACTCAGGCA >Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus ---------------------------------------ATGAGCTCTGTCAAATTTGAG---------------------------------------GCCTCTGGTCGCACTGGCAGAACTCCT---------------------------------------------------------------------------------CTCTCCTATTTTGCCCCTATAACAGTTACCTCTGGGAAAAATCTTTGGAACGTCCTCCCTAAAAATGCAGTCCCATCTGGAAAAGGA---AAGGCCAACCAGCAGGTTGGATACTGGTCCGAACAAACCAGA---TGGAAGATGCAGAAGGGAGAACGGGTTGAGAAGCCTTCTTTCTGGCACTTCTACTTTCTTGGTACCGGCCCTCACGCTGATGCCAAGTTTAGAGAGCGCATCCAAGGTGTGGTGTGGGTTAGCAAAGCGAATGCTGACCTTAAACCG---ACTGACCTTGGAACCAGATCTAAGGCTAGAAGTCTCATTACTCCAAAATTTGACATTGAGTTGCCTGACGATATTGAAATCGTG---GACAAGTCCTCTGCACCAAATTCGCGGGGAAATTCGCGTAGCCAGAGCAGAGGTGCAAAGAGCGGTTCGAAGAGTCGCGGCAACTCCCAGACACGTGACAACTCCAAGTCT---CGTGACAATTCCAATAACAGAGGAAAATCTCAGTCTCGTAATAACTCACGCAGTCGCGGACAGCAGCGTAATAACAACCAGCAACGCCAGGGCTCTGGTAACGCAGGTAATAACACT---GCTGACCTCGCTGCCGCAATTGTGCTGGCCCTTGAAAAAGCTGGTCTTGCAAGAGACACT---------GAGAAGGCTCCTAAAAAGGAGAGTCCTAATAATAATAAAAAACAGAAGTCCAGAGCAAGTTCTCCTGCTCCAGCTCAGTCCAAGAACACAGACCAACTGACTAAGGTCGTGTGGAAACGCATGCCTGACCCCAGTTGCAATGTGAAACAATGCTTT---------GGACCACGCTCTACTTACCAGAACTTCGGCGACGAAGAGGCTGTTGAGAAAGGTGTGCGTGCCAAGCACTACCCATCATGGGCTGAACTGACACCAAACACTGCTGCACTGCTTTTCGGCGGTGAAGTAATGACGGTTGAGGATGGTGAAGATATC------------------GTCATCCAATATACCTATCAGATGAGAGTCCCGAAAACAACTCCGGCTCTCCAGACATTCCTG------------CCACAGGTGAGTGCCTTCGCTAAT---------------GCTAGCGGAGATGACGAATCTGAATCAGGTCAGGAA------------------------------------------------------------------------------------------------------------ATGCCAGTTGTTACAAGTGCTGCCGAAAGTGCTGCACCTGCACCAGCTCCTACACCAAAACTTAATCCCAAAGCCGAGACCTTTGTGCCGCCTAAAGTTGACCCCAACTATTTCGCAGGCATGAAGGTTGAGATCATGAACAAAACTATCTCAGATGACAGTACGGTT >BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus ATGTCTGGACGGAATAAGCCCCGTTCTGGCACTTCTACTCCTAAG---GTTACGTTCAAACAAGAATCTGATGGTTCCGAC---TCTGAATCTGAACGTCGCGCTTCTATTCGCCCTAAGAATAAG---------------------GGT------------AGTTCTTTTAAACCAGAAAAGCCTAAAGCTGCTCCTCCTCAGAATGTTTCTTGGTTTGCACCACTAGTCCAGACAGGGAAAAATGATCTT---CGCTTTCCTCGTGGACAAGGTGTGCCTATAAGTCAAGGTGTGGACCCTGTCTACAACCATGGCTATTGGCTCCGAACTCAGCGTTCTTTCCAAAAAGGA---GGGAAACTTGTGCAGGCCAATCCCAGGTGGTATTTTTACTACACTGGTACTGGACGTTATGGTGACATGCGTTATGGCACTAAGAACCCTGATCTAATCTGGGTTGGTGAGGAAGGTGCTAATGTTAACCGTGTTGGTGACATGGGCACGCGTAATCCTAATAATGACGGTGCCATCTCT---------GTTCAGTTACATGATGGC------ATTCCT---AAAGGCTTCTATGCAGAAGGACGTAACTCTCGCAGCAACAGCCGCAATAGT---------------TCACGTAACTCCAGTAGAGCTTCTTCGCAGGGCAACTCACGTGCA---------------------------------------------------------------GGTTCAAGAAATGCCTCTCCTGGCCGTAATGCACCTAATGTTGCTTCAGGTAAT------GAGCCATGGATGGCCTATTTAGTTCAGAAACTGGAAGCACTG---------------------------GAGAACAAAGTCAATGGTCCTAAGGAG---ACTAAGAAACCAGTGCAAGTTACCAAGAATGAGGCTGCAGCTAATGCTAAGAAACTGCGTCAT---------------------AAGAGAACACCACATAAGGGCAGCGGCGTTACAACTAATTATGGTCGCAGAGGTCCTGGTGATCTTGAGGGCAATTTTGGAGACCTAAATATGTTGAAACTTGGAACTGATGATTCCAGGTTTCCTGCTGCTGCGCAAATGGCTCCAAATGTAGCATCTTTTCTTTTCATGTCACATTTTTCAGTTAGAGAAGAAAATGATGCTCTG------------------TGGCTTCACTATAAGGGTGCCATTAAGTTGCCTAAAGATGACCCTAATTATGACCAGTGGACCAAAATCCTGGGTGAAAATCTTAATGCTTATAAGAATTTTCCTCCAGTGGAACCAAAGAAGGACAAAAAGAAGAAGGAAGAAGCCAGT------GTTGAAGTTGCTGTCTATGAGGACGCTGCCACTGGCACAGACCAGCCCATAGTACAGAAAATATGGGTTAAAGATGATGGTGTCCAGACCGATGATGAATGGATCGGTGGTGATGATACTGTCTATGAAGAAGAAGATGACAAACCCAAGGCTCAGAGAAGACACAAGAAGAGGGCCTCCACAGCTTCACGT------GTGACT------------------------------GTAGCAGACCCTACTAATCTTGCTAATGAGAGATCC >BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus ---------------------------------------ATGGCTTCAGTTAGCTTTGAG------------------------------------CAACAGCGTGGCCGTAGTGGTAGGGTTCCT---------------------------------------------------------------------------------CTTTCTTTCTTTTATCCTGTCATTGTGACAGACAACACTCCTTTCTGGAAGGTTATGCCTAATAATGCCGTACCTAATGGCATGGGC---ACGAAGGATGAACGCATTGGTTATTGGAATGAGCAAAAACGC---TGGCGCATGCGCAAAGGACAGAGAATTGATCTGCCATCTAAATGGCACTTCTATTTCCTTGGCACTGGCCCACATAAAGAAGCTTCATTCCGCCAACGCCTTGACGGTGTGTACTGGGTTGCAGTCAATGGAGCTAAAACTCAACCT---ACTTCACTTGGCAGCCGTAAAAAGAGTGCTGCTATGATGGTACCGCAATTCAGTGTGTCGCTTCCTTCAAACATTCAAGTTCAAACCGAGAATGCATCAGCTCCTGCATCTCGTAATCAAAGTCAGAATCGT---------------------TCACAGTCTGCTAATCGTTCGCAGTCACGTGGACCCAACCAAAATGTCAACCAAAACCAG------------------------------AATACCAATGGAAATCAGCGTGCCAGATCGCAATCGCGTAACCGTGGCAGCAATAATAATCAACCTCAGAATCAA---GTTGATATCGTGGCTGCAGTTAAGGCTGCTTTGCAACAGCTTGGAGTTGGAAATCAAAATCAGGGAGGAACTGGTAAGAAGAGCAAGAGCAACTCGGGTGTGAATACGCCTAAGGAGCAACGTGCGAAATCCCCAGCTAAAACTCCACCAGTTCAGCGTAAGCAAATGGAAAGACCCGTTTGGAAGCGGGTGCCCAACTCTTCAGAGAATGTCACTGCTTGTTTC---------GGTCCTCGTGATGCTGTGCATAATTTTGGTGACTCTGATGTTGTACATCATGGCACTGATGCTAAGCATTGGCCGCAGCTTGCTGAGCTCATACCCACTCCTGCTGCTTTAGCTTTTGGCAGTGAAATTTCTACAACAGAGGTTGGTGACAAAGTA------------------GAAATCACCTACACCTACAAAATGAAGGTTGACAAGGCTGACAAGAACCTTCCAGCTTTTCTT------------CAACAAGTGAGCGCTTATGCGCAA---------------CCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACAGGCCAACCAGATCTCGTCTCAATTGAATCCAGTTGCCCCTGTGTTTACTCCAGGCATGGATGAT---------------------TCTGTTGAAATCATAGACCAAGTCTTCGACACTGATGTG------ >BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus ---------------------------------------ATGGCTTCAGTCAGTTTTGAT---------------------------------GACCAACCCAGGGGCCGTGGTGGTAGGATGCCA---------------------------------------------------------------------------------CTTTCATATTATTACCCTATTATGGTTACTGATGGTAAACCCCTTTTCAAGGTGCTGCAAAGTAATGCAGTGCCCACTGGAAAGGGA---ACCAAGGAACAACAAATTGGCTATTGGAACATGCAAGCTCGC---TGGCGCATGGTAAAAGGAGTCCGTAAGGATCTTGATCCCAAATGGCACTTCTATTACCTAGGCACCGGACCACATGCAGACGCACCATTCCGTCAAAGACTTGAAGGTGTTTTCTGGGTGGCTGTCCAGGGCTCTAAAACTGAACCT---ACAGGATTGGGTGTGCGTAAGCGTAACGCCCCACTCCTAAAACCACAATTCAGTTTTAAGCTGCCAGTAAATGTTGAAATTCAAGAAGATTCAGCTTCCCGGCCAAATTCAAGAAATCCCAGCAGTAACCGTGACCGC---------------AGTCAGAGTGGAAATCGCTCTGCTTCTAGTGGTCCAAAACAGGGTAATTCCCAAAACCAA---------AATAATTCCTCCCAGGGAAATAATTCAAACAACCAGCAGCGCTCTAGGAATAATTCAAAGAGCCGAGGCCAAAATAACCAGTCTAACAATTCACAG---GCTGACATTGTTGCTGCTGTAAAACAGGCACTCAAAGAACTTGGAGTGTCCCCCCAGGAGAAG------AAGAATAAACAGAAAGGTTCTACATCTGGTAACAACACACCAAAAGAGCAGCGTTCAAAATCACCTGCTCCAAGTCCAAACACCCAGAGGAAACAAATTGAGCGTCCAGTCTGGAAGCGTGTTCCCACGTCTGCAGAGGATGTTACAGTGTGTTTT---------GGACCACGTGACACCCAGCAAAATTTTGGCGACCAAGATCTCGTCAGACATGGTGTTGATGCTAAACACTACCCCCAGCTAGCAGAATTTGTTCCCGGAACTGCTGCATTGCTCTTTGGAGGCGAAGTTTCCACCAGAGAATCTGGAGAAGATGTA------------------GAAATCACCTTTCACTATAAATTGAAGGTCAAGAAATCTGACAAGAACCTCCCTCTTTTCCTC------------CAACAAGTCAGTGCTTACGCACTA---------------CCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCAGGCACCTAATATACCTTCTCAATTGAACCCTATTGCCCCAGATTTCACACCTGGTTTTGAAATG------------GTTAATGAGACTGTTGAGATAATAGACCAAGTCTATGACACCCCCGATGCA--- >BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus ---------------------------------------ATGGCTTCAGTCAGCTTTGAT---------------------------------GATCAATCTAGGGGCCGTAGTGGTAGGGTACCA---------------------------------------------------------------------------------CTTTCCTTTTACAACCCTGTTATGGTAACTGATGACAAGCCGCTTTTCAAGGTAATGCCTCATAATGCAGTACCTACTGGAAAGGGC---AACAAAAGTCAACAGATTGGCTATTGGAATATGCAACCCCGC---TGGCGTATGGTTAAAGGTCAGCGTAAGGATCTGACTCCAAAATGGCATTTTTACTATCTTGGAACTGGACCACATGCAGAAGCACCGTTCAGGCAGAAGCTTGATGGTGTCTTCTGGGTTGCAGTCCAGGGTTCAGACACTCAACCT---ACGGGACTTGGTGTGCGTAAGCGTAATCAGCCGCTCATCAAACCGCAGTTCGCTGTGAAATTGCCAGCCAACATTGAGATCCAGGAGGAAAATGCTTCCAAGCCAAATTCCAGGAACCCAAGTACCAACCGTGATCGC---------------AGTCAGAGTGGAAATCGCTCTGCTTCACGTGGTCCACAACAGGGTAATACCCAAAATCAAAATCAGAATAACAATTCTTCCAAGGGAAATCAAAATAACAATCAGCAGCGCTCTCGTAACAATTCAAAGAGCCGAAGCCAAAATAACAGTCAACCACAGAACCAACAGGTTGACATTGTTGCTGCTGTCAAACAAGCACTCAAAGAACTTGGAGTGTCCCCCCAAGAGAAG------AAACAAAAACAGAAAGGTAATACATCTGGTAACAACACACCAAAAGAGCAGCGTGCAAAGTCTCCTGCTCGCAGTCCGTCATCGCCAAGAAAACAACTTGAGCGGCCTGTCTGGAAGCGTGTTCCAACAGAAGCTGAGAATGTTACGCAATGTTTC---------GGTCCACGAGACACACTGCGCAACTTCGGTGACAGGGAATTGACGCTAAGAGGTGTTGAAGCTAAAAACTATCCACAAATCGCTGAATTTGTGCCGACACCTGCTGCATTGCTTTTCGGTGGCGAAGTGTCTACTAGAGAAGCCGGTGAAGATGTA------------------GAAATTACCTTTCATTACAAAATGAAAGTTAAGAAAGATGACAAGAACCTCCCTCTTTTCCTT------------CAACAAGTCAGTGCTTATGCATTG---------------CCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAAGCACCCAATGTACCTTCTCAACTTAACCCAGTTGCACCAGATTTCACACCAAGTGGAGTGGAA---------ATGGTCAACGAGACTGTTGAGATAATTGATCAGGTCTATGATTCCTTTGATGCA--- >BtCoV_Rh_YN2012_Rs4259_N_QBP43285_1_2013_04_17_China_Unknown_Bat_coronavirus ---------------------------------------ATGGCTTCAGTCAGCTTTGAT---------------------------------GATCAATCTAGGGGCCGTAGTGGTAGGGTACCA---------------------------------------------------------------------------------CTTTCCTTTTACAACCCTGTTATGGTAACTGACGACAAGCCGCTTTTCAAGGTAATGCCTCATAATGCAGTACCTACTGGAAAGGGC---AACAAAAGTCAACAGATTGGCTATTGGAATATGCAACCCCGC---TGGCGTATGGTTAAAGGTCAGCGTAAGGATCTGACTCCAAAATGGCATTTCTACTATCTTGGAACTGGACCACATGCAGAAGCACCGTTCAGGCAGAAGCTTGATGGTGTCTTCTGGGTTGCAGTCCAGGGTTCAGACACTCAACCT---ACGGGACTTGGTGTGCGTAAGCGTAATCAGCCGCTCATCAAACCGCAGTTTGCTGTGAAATTGCCAGCCAACATTGAGATTCAGGAGGAAAATGCTTCCAAGCCAAATTCCAGGAACCCAAGTACCAACCGTGATCGC---------------AGTCAGAGTGGAAATCGCTCTGCTTCACGTGGTCCACAACAGGGTAATACCCAAAATCAAAATCAGAATAACAATTCTTCCAAGGGAAATCAAAATAACAATCAGCAGCGCTCTCGTAACAATTCAAAGAGCCGAAGCCAAAATAACAGTCAACCACAGAACCAACAGGTTGACATTGTTGCTGCTGTCAAACAAGCACTCAAAGAACTTGGAGTGTCTCCCCAAGAGAAG------AAACAAAAACAGAAAGGTAATACATCTGGTAACAACACACCAAAAGAGCAGCGTGCAAAGTCTCCTGCTCGCAGTCCGGCATCGCCAAGAAAACAACTTGAGCGGCCTGTCTGGAAGCGTGTTCCAACAGAAGCTGAGAATGTTACGCAATGTTTC---------GGTCCACGAGACACACTGCGCAACTTCGGTGACAGGGAATTGACGCTAAGAGGTGTTGAAGCTAAAAACTATCCACAAATCGCTGAATTTGTGCCGACACCTGCTGCATTGCTTTTCGGTGGCGAAGTGTCTACTAGAGAAGCCGGTGAAGATGTA------------------GAAATTACCTTTCACTACAAAATGAAAGTTAAGAAAGATGACAAGAACCTCCCTCTTTTCCTT------------CAACAAGTCAGTGCTTATGCATTG---------------CCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAAGCACCCAATGTACCTTCTCAACTTAACCCAGTTGCACCGGACTTCACACCAAGTGGAGTGGAA---------ATGGTCAACGAGACTGTTGAGATAATCGATCAGGTCTATGATTCCTTTGATGCA--- >CMR66_NA_AWV67059_1_2013_12_Cameroon_Bat_Bat_coronavirus ATGTCTGGAAGGAACAGATCTAGACCTGGTACACCTTCCCCTAAG---GTTACGTTCAAACAAGAATCTGACGGTTCTGAC---TCCGAATCTGATCGCCGTAATGGTAACCGTACTGGTGCCCGTTCTAAGAATAATAATGGTAGAAGT------------AGTGCTCCCAGGCCTGAGAAGCCTAAGGCAGCCCCTCTTCAGAATGTTTCCTGGTTTGCACCATTGGTTCAAACCGGTAAATCTGAACTG---CGTTTCGCTAGAGGTGAAGGAGTGCCCGTGAGTCAAGGTGTTGATCCCACCTATGAACATGGGTACTGGCTACGTACACAGAGGTCTTTCCAGAAAGGT---GGTAAGCAAGTGTTGGCTAACCCCCGCTGGTACTTCTATTATACTGGTACCGGCCGCTTTGGTGACCTTCGTTTTGGTACTAAAAACCCGGACATAGTTTGGGTTGGCCAGGAAGGTGCCAATATCAACCGCCTAGGTGATATGGGCACACGTAACCCCAGTAATGATAGTGCTATACCA---------GTACAGTTAACTGGTGGT------ATACCT---AAGGGTTTCTATGCAGAGGGACGCGGCTCTCGCGGTAATAGCCGCAGCAGT---------------TCACGTAACTCGAGTAGAGCTTCGTCGCGTGGTAATTCACGCGCT---------------------------------------------------------------GGCTCCCGTGGTGCATCACCCGGTAGGCCTGCAGCTACTCCATCCGCT------------GAACCGTGGATGGCTTATCTTGTACAGAAGTTGGAAAAACTG---------------------------GAAAGCCAGGTTAATGGTACCAAGCCAGTTACCAAGAATCCACTTCAGGTGACTAAGAATGAAGCTGCTGCCAATGCTAAGAAGCTCAGGCAC---------------------AAACGCACTGCGCACAAGGGCAGTGGTGTTACTATGAATTACGGCAGACGTGGCCCAGGTGACTTGGAGGGTAATTTTGGGGACCTTGACATGCTCAAGCTTGGTACTGATGATCCCAGGTTTGCTGCCGCTGCGCAAATGGCCCCTAATGTTTCATCTTTTCTGTTCATGTCTCATTTATCCACGAGGGAAGAAGGGGATGCTATG------------------TGGCTCCATTATAAAGGTGCCATAAAGCTTCCTAAAGACGACCCCAACTATGATCAGTGGACTAAGATTTTGGCAGAAAACTTGAATGCCTACAGAGATTTCCCTCCGCCTGCGCCCAAAAAGGACAAAAAGAAGAAGGAAGAGACCACT------CAAGAAACCGTCATCTTTGAAGATGCGTCTACTGGAACAGACCAACCA---GTTGTTAAGGTCTGGGTAAAAGATCAGGACGCACAAACTGATGACGAGTGGCTGGGTGGCGATGAAACCGTTTATGAAGAAGAGGACGACCGTCCAAAGACCCAGAGGAGACACAAGAAGAGAGGATCAACTGCCTCTCGT------GTGACT------------------------------ATTGCGGACCCCACTAATGCAGGTGCCGAAAGGTCT >CMR704_P12_N_YP_009824993_1_2013_12_Cameroon_Bat_Bat_coronavirus ATGTCTGGACGTCGCACACCGCGA---------AACCAGCCACAG---GTTTCTTTTAAGAATGAATCAGAC---TCTGAC---TCCGAGTCTGGAGCGCGTTCCCAATCAAGAGGACGCAATTCCAATAACAATAATAATGGAGGCAATGGTGGTGCCCGTCGTAAGGACAAGCCAGAAAAGCCCAGAGCTGCTCCAGCTCAAAATGTGTCCTGGTTTTTGCCTATAGTGCAAACTGGTAAACAGGATTTA---CGGTTTGCTCGTGGTGAAGGCGTACCTGTTTCTCAGGGCGTTGACATCACTTACCAGCATGGTTACTGGCTTCGCAGGCAGCGCACCTTTAATAAGGGC---GGCAAGCAAGTCCAAGCTAATCCCAGGTGGTTTTTCTACTACACCGGCACTGGTCCTTATGAAGGACTACGTTATGGCAGTAGAAACAACGATATAATCTGGGTCGGCAACGAAGGTGCTAATGTCAACCGCCTTGGTGACATGGGTACACGTAACCCAGCTAATGATGCAGGAATACCA---------GTTCAGCTCGCTGAAGGC------ATCCCT---AAGGGCTTCTACGCGGAGGGCCGCAATTCCAGAGGAAATAGCCGCAACAGC---------------TCTCGCAGTTCCAGCAGGGGCAGTTCTAACGCTAACTCTAGGAAT---------------------------------------------------------------CAGTCTAGATCAAATTCTCCAGGCCGTGGATCAGCACCTCCAAGTGGCGGT---------GAACCATGGATGGCTTATTTGATTCAGAAATTGGAAAACCTT---------------------------GAGCAGCGCGTTGACGGCAAGAAGTCC---GACAAGCAGCCTGTCAAGGTAACCAAGAATGTGGCTTCAGAGAATGCCAAAAAGTTGCGCCAC---------------------AAAAGAACTGCACACAAGGGCAGTAATGCGACGCAGAATTATGGCAGACGCGGACCAGGCAATCTTGAGGGCAATTTTGGCGACCAAGAATTTCTTAAGCTCGGTACAGATGACCCTCGCTTCCCAGTTGTTGCTCAGATGGCTCCTAACACCAGTTCTTTTGTGTTCATGTCGCATTTCACACCTCGTTATGAGGCTGATGCTTTG------------------TGGCTGGATTACACAGGTTCCATCAAGCTGCCTAGGGATGATCCCAACTTTCCCCAATGGGAGAAATTGTTGGCAGAGAACATCGACGCGTACAAGAGCTTCCCACCACCTAAGCCTAAGTCAGACAAGAAGAAGAAGTCTGACAAGTCAGATTCAGCTGCAGGACCGTCAGAGGATCTACAGATGCAAGTCGTAGACCCATCTGGTGTTCAGCGCATCTATATGAAGGATGCTGCTGACCAGACTGACGATGAGTGGCTG---CAGGATGACACCATTTATGAGGATGAGAATGACAAACCGAAGGCTCAGAGACGCCAATCCATCAAGAAGCGCAACGCCACTCATCAGAGACATGTC------------------------------TCAATTGATGGCGCTGCTCAATCATCAGCC------ >CMR705_P13_NA_AWV67075_1_2013_12_Cameroon_Bat_Bat_coronavirus ATGTCTGGACGTCGCACACCGCGA---------AACCAGCCACAG---GTTTCTTTTAAGAATGAATCAGAC---TCTGAC---TCCGAGTCTGGAGCGCGTTCCCAATCAAGAGGACGCAATTCCAATAACAATAATAATGGAGGCAATGGTGGTGCCCGTCGTAAGGACAAGCCAGAAAAGCCCAGAGCTGCTCCAGCTCAAAATGTGTCCTGGTTTTTGCCTATAGTGCAAACTGGTAAACAGGATTTA---CGGTTTGCTCGTGGTGAAGGCGTACCTGTTTCTCAGGGCGTTGACATCACTTACCAGCATGGTTACTGGCTTCGCAGGCAGCGCACCTTTAATAAGGGC---GGCAAGCAAGTCCAAGCTAATCCCAGGTGGTTTTTCTACTACACCGGCACTGGTCCTTATGAAGGACTACGTTATGGCAGTAGAAACAACGATATAATCTGGGTCGGCAACGAAGGTGCTAATGTCAACCGCCTTGGTGACATGGGTACACGTAACCCAGCTAATGATGCAGGAATACCA---------GTTCAGCTCGCTGAAGGC------ATCCCT---AAGGGCTTCTACGCGGAGGGCCGCAATTCCAGAGGAAATAGCCGCAACAGC---------------TCTCGCAGTTCCAGCAGGGGCAGTTCTAACGCTAACTCTAGGAAT---------------------------------------------------------------CAGTCTAGATCAAATTCTCCAGGCCGTGGATCAGCACCTCCAAGTGGCGGT---------GAACCATGGATGGCTTATTTGATTCAGAAATTGGAAAACCTT---------------------------GAGCAGCGCGTTGACGGCAAGAAGTCC---GACAAGCAGCCTGTCAAGGTAACCAAGAATGTGGCTTCAGAGAATGCCAAAAAGTTGCGCCAC---------------------AAAAGAACTGCACACAAGGGCAGTAATGCGACGCAGAATTATGGCAGACGCGGACCAGGCAATCTTGAGGGCAATTTTGGCGACCAAGAATTTCTTAAGCTCGGTACAGATGACCCTCGCTTCCCAGTTGTTGCTCAGATGGCTCCTAACACCAGTTCTTTTGTGTTCATGTCGCATTTCACACCTCGTTATGAGGCTGATGCTTTG------------------TGGCTGGATTACACAGGTTCCATCAAGCTGCCTAGGGATGATCCCAACTTTCCCCAATGGGAGAAATTGTTGGCAGAGAACATCGACGCGTACAAGAGCTTCCCACCACCTAAGCCTAAGTCAGACAAGAAGAAGAAGTCTGACAAGTCAGATTCAGCTGCAGGACCGTCAGAGGATCTACAGATGCAAGTCGTAGACCCATCTGGTGTTCAGCGCATCTATATGAAGGATGCTGCTGACCAGACTGACGATGAGTGGCTG---CAGGATGACACCATTTATGAGGATGAGAATGACAAACCGAAGGCTCAGAGACGCCAATCCATCAAGAAGCGCAACGCCACTCATCAGAGACATGTC------------------------------TCAATTGATGGCGCTGCTCAATCATCAGCC------ >CMR900_NA_AWV67051_1_2013_12_Cameroon_Bat_Bat_coronavirus ATGTCTGGACGTCGCACACCGCGA---------AACCAGCCACAG---GTTTCTTTTAAGAATGAATCAGAC---TCTGAC---TCCGAGTCCGGACAGCGTTCTCAATCAAGAGGACGCAATCCCAATAATAATAATAATGGAGGCAATGGTGGTGCTCGTCGTAAGGATAAGCCAGAAAAGCCCAGAGCTGCTCCCCAGCAGAACGTGTCCTGGTTTCTGCCATTAGTTCAGACTGGAAAGAATGACCTG---CGTTTTCCTCGCGGTCAAGGTGTTCCCATCACTCAAGGTGTGGACCCAACTTTCCAGCATGGTTATTGGCTTTTCCGTCAACGTTCCTTCCAGAAGGGC---GGAAAACAGGTAATGGCTAACCCCAGATGGTACTTTTACTATACCGGTACAGGTCCTTATGAAGGGCTTCGTTATGGCAGTAAGAGTAATGATTTAATCTGGGTTGGCAATGAAGGGGCTAATGTCAACCGCATTGGTGACATGGGCACTCGCAACCCAGCTAATGATGCAGGTCTTGTC---------GTTCAGCTCGCTGATGGC------ATTCCT---AAGGGCTTCTATGCAGAAGGCCGCAATTCCAGAGGGAATAGCCGTAACAGC---------------TCTCGCAGTTCCAGCAGGGGCAGTTCTAATGCTAACTCTAGGAAT---------------------------------------------------------------CAGTCTAGATCAAATTCTCCAGGCCGTGGATCAGCACCTCCTAGTGGCAGT---------GAACCCTGGATGGCTTATTTGATTCAGAAATTGGAAAACCTT---------------------------GAGCAGCGCGTTGACGGCAAGAAGTCC---GACAAGCAGCCTGTCAAGGTAACCAAGAATGTGGCTTCAGAGAATGCCAAAAAGTTGCGTCAC---------------------AAAAGAACTGCGCATAAGGGCAGTAATGTGACTCAAAATTATGGCAGACGCGGACCAGGCAACCTCGAGGGCAATTTTGGTGATCAGGATTTTCTCAAGCTTGGCACAGATGATCCTCGCTTCCCAGTAGTAGCACAGATGGCTCCTAATACCAGTTCTTTTGTGTTTATGTCCCAATTCACGCCTCGTTACGAGAGCGATGCATTG------------------TGGCTCGATTACACAGGTTCCATCAAGCTGCCGCGAGATGATCCCAATTTTCCCCAATGGGAAAAGTTGCTAGCAGAGAATCTTGACGCTTACAAGAGTTTTCCACCACCTAAGCCTAAGTCAGACAAGAAGAAGAAGTCTGACAAGTCAGATTCAGCCACTGGCCCATCAGCTGATCTACAGATGCAAGTCGTAGATCCTTCTGGTGTTCAGCGCATCTACATGAAGGATGCTGCCGACCAGACCGATGATGAATGGCTG---CAGGATGACACCATTTATGAGGATGAGAATGACAAGCCTAAGGCTCAGAGACGCCAATCCATCAAGAAGAGAAATGCTCAGCGTCATGTT------------------------------------TCTATTGATGGATCTGCGCAGTCAAGTGCA------ >JPDB144_N_ANA96046_1_2012_12_China_Bat_Bat_coronavirus ---------------------ATGGCAACTCCTGCTGCACCTCGCACCATTAGTTTTGCT---------GATAATAATGAC---AACCAAACCAATCAGCAGCAGCGTGGACGCGGAAGAAACCCT------------------------------------------------------AAGCCACGACCTGCTCCCAATAACACTGTCTCCTGGTACACAGGGCTCACCCAACACGGTAAAAACCCTCTT---GCCTTCCCTCCTGGGCAGGGTGTACCTCTTAATGCCAATTCTACAACAGCCCAAAATGCTGGCTATTGGCGGAGACAAGACCGGAAAATCAATACCGGTAATGGTGTCAAA---CAATTATCTCCCAGATGGTTCTTCTACTATACAGGAACCGGACCAGAGGCTAATTTACCTTTCAGATCCGTCAAGGATGGTATCGTCTGGGTCTATGAAGAGGGTGCCACAGATGCTCCT---TCAGTCTTTGGGACACGCAACCCTGCAAATGATGCAGCTATCGTT---------TGTCAGTTTGCGCCAGGTACTCTTATTCCT---AAAAACTTCCACATTGAAGGGACTGGGGGTAATAGTCAATCATCTTCAAGA---------------GCATCCTCCAACAGTAGGAACTCTTCTAGATCCAATTCCAGAGGA------------------------------------------------GGACGAAGCACATCTAACTCCAGAGGGACTTCCCCAGTTTCACATGGAGTCGGAAGTGCAGAATCCTTAGCTGCTCTGCCACTTCTTCTAGACTTGCAGAAGCGTTTAGCTGATCTT------------------------------------GAGTCTGGAAAG---------TCAAAGCAGCCTAAAGTTGTCACTAAGAAAGACGCTTCAGCTGCAAAAAACAAAATGCGCCAT---------------------AAGCGCGTTGCCACCAAAAATTTCAATGTAACTCAAGCCTTTGGTCTGCGTGGACCAGGCCCGTTACAGGGAAATTTTGGTGACATGAACTATAACAAGTTTGGTACAGAGGACCCACGTTGGCCTCAGATGGCTGAACTTGCTCCCTCAGCTTCAGCTTTCATGAGTATGTCTCAATTTAAGCTTACTCATCAAAGCAATGATGACAAAGGTGAACCTATTTACTTTTTGTCATATTCTGGAGCAATTAAACTAGACCCTAAGAACCCCAACTACAAAAAGTGGCTGGAGCTTCTTGAGGCAAATATTGATGCTTACAAAACCTTC------------CCCAAGAAGGAGCGTAAGCCTAAAACTACAGAAGAT---------------------------------------------------------------------------------------------------GGAGCTTCTGCTTCATCCTCAGCTAGTCAAATGGAGGATGTTGATGCTAAACCTCAGCGAAAGCCTAAAAGCCGAGTAGCAGGTAGCATCACTATGCGTTCTGGAAGCTCA------------------------CCAGCTCTTCAGGATGTAAACTTCGATTCAGAGGCT------ >JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus ---ATGTCTGATAATGGAACCCAAAACCAACGTAGTGCCTCCCGC---ATTACATTTGGTGGACCTTCAGATTCAACTGACAATAACCAGGATGGAGGACGCAGTGGTGCACGGCCAAAACAACGC------------------------------------------------------CGACCCCAGGGTTTACCCAATAATACCGCGTCTTGGTTCACAGCTCTCACTCAGCATGGTAAGGAAGGACTC---AAATTCCCTCAAGGCCAGGGAGTTCCTATCAACACCAATAGTGGCACAGATGACCAAATTGGCTACTATAGAAGAGCTACCCGACGAGTTCGTGGTGGTGACGGTAAAATGAAAGAGCTTAGCCCCAGATGGTACTTCTATTACCTAGGAACTGGCCCAGAAGCTTCACTTCCCTATGGTGCCAATAAAGAGGGCATCGTATGGGTTGCAACTGAGGGTGCCTTGAACACACCAAAAGATCATATTGGCACCCGCAATCCTAATAACAATGCTGCCATTGTT---------CTACAACTTCCTCAAGGAACAACATTGCCA---AAAGGCTTCTACGCTGAAGGGAGCAGGAGTGGTAGTCAAGCCTCTTCTCGC---------------TCCTCATCACGTAGTCGTGGAAATTCAAGAACTTCAACTCCTGGC---------------------------------------------------------------AGCAGTAGGGGAAATTCTCCTGCTCGAGTGGCTAGCGGAGGTGGTGAA------------ACTGCCCTCGCGCTATTGCTGTTAGACAGATTGAACCAGCTG---------------------------GAGAGCAAAGTTTCTGGTAAAGGCCAA---CAACAACAAGGCCAAACTGTCACTAAGAAATCTGCTTCAGAGGCATCTAAAAAGCCTCGGCAA---------------------AAACGTACCGCAACCAAACAGTACAATGTCACCCAAGCTTTTGGGCGACGTGGTCCAGATCAAACTCAAGGAAACTTTGGAGACCAGGAGCTAATCAGACAAGGAACTGATTATAAACACTGGCCGCAAATAGCACAGTTTGCTCCAAGTGCCTCTGCATTCTTCGGAATGTCACGCATTGGCATGGAAGTCACACCTTCGGGAACA------------------TGGCTGACTTATCATGGAGCCATTAAATTGGATGATAAAGATCCCCAATTCAAAGACAACGTCATACTGCTGAATAAGCACATTGACGCATACAAGACATTCCCACCAACAGAGCCTAAAAAGGACAAAAAGAAAAAGACTGATGAAGCT---------------------------------------------------------------------------------------------------------------------------------------------CAGCCTTTGCCGCAGAGA---AAGAAACAGCCCACTGTGACTCTTCTGCCTGCGGCTGATATGGATGAT---------TTCTCCAGACAACTTCAAAATTCCATGAGTGGAGCTTCTGCTGATTCAACTCAGGCA >Jiyuan_84_NA_ARI44812_1_2012_China_Bat_Bat_coronavirus ---ATGTCTGATAATGGACCCCAAAACCAACGTAGTGCCCCCCGC---ATTACATTTGGTGGACCCTCAGATTCAACTGACAATAACCAGGATGGAGGACGCAGTGGTGTACGGCCAAAACAACGC------------------------------------------------------CGACCCCAGGGTTTACCCAATAATACTGCGTCTTGGTTCACAGCTCTCACTCAGCATGGTAAGGAAGGACTC---AAATTCCCTCAAGGCCAGGGAGTTCCTATCAACACCAATAGTGGCAGAGACGACCAAATTGGCTACTACAGAAGAGCTACCCGACGAGTTCGTGGTGGTGACGGTAAAATGAAAGAGCTCAGCCCCAGATGGTACTTTTATTACCTAGGAACTGGCCCAGAAGCTTCACTTCCCTATGGTGCCAATAAAGAAGGCATCGTATGGGTTGCAACTGAGGGTGCCTTGAACACACCAAAAGATCATATTGGCACCCGCAATCCTAATAACAATGCTGCTATTGTG---------CTACAACTTCCTCAAGGAACAACATTGCCA---AAAGGCTTCTACGCAGAAGGGAGCAGGAATGGTAGTCAAGCCTCTTCTCGC---------------TCCTCATCACGTAGTCGTGGAAATTCAAGAACTTCAACTCCTGGC---------------------------------------------------------------AGCAGTAGGGGAAATTCTCCTGCTCGAGTGGCTAGCGGAGGTGGTGAA------------ACTGCCCTCGCGCTATTGCTGTTAGACAGATTGAACCAGCTG---------------------------GAGAGCAAAGTTTCTGGTAAAGGCCAA---CAACAACAAGGCCAAACTGTCACTAAGAAATCTGCTTCAGAGGCATCTAAAAAGCCTCGACAA---------------------AAACGTACTGCAACCAAACAGTATAATGTCACCCAAGCTTTTGGGCGACGTGGTCCAGATCAAACTCAAGGAAACTTTGGAGACCAGGAGTTAATCAGACAAGGAACTGATTATAAACACTGGCCGCAAATAGCACAGTTTGCTCCAAGTGCCTCTGCATTCTTCGGAATGTCACGCATTGGCATGGAAGTCACACCTTCGGGAACA------------------TGGCTGACTTACCATGGAGCCATTAAATTGGATGACAAAGATCCCCAATTCAAAGACAACGTCATACTGTTGAATAAGCACATTGACGCATACAAAACATTCCCACCAACAGAGCCTAAAAAGGACAAAAAGAAAAAGACTGATGAAGCT---------------------------------------------------------------------------------------------------------------------------------------------CAGCCTTTACCGCAGAGACAAAAGAAACAGCCCACTGTGACTCTTCTTCCTGCGGCCGACATGGATGAT---------TTCTCCAGACAACTTCAAAATTCCATGAGTGGAGCTTCTGCTGATTCAACTCAGGCA >PREDICT_PDF_2180_N_ARJ34233_1_2013_02_20_Uganda_Bat_Bat_coronavirus ---------------------ATGGCCACTCCCGCTGCACCTCGTGCCGTGTCTTTTGCC---------GATAACAATGAC---AACTCCAATAATAACCAGTCTCGAGGAAGAGGAAGAAACCCT------------------------------------------------------AAACCTCGACCTGCACCAAATAACACTGTCTCCTGGTACACGGGGCTTACCCAACACGGGAAAGTCTCTCTT---TCCTTCCCACCTGGACAGGGCGTACCTCTTAATGCCAATTCTACCCCTGCGCAAAATGCTGGGTATTGGCGGAGACAGGACAGAAAAATTAATACAGGAAATGGAACCAAG---TCACTGGCTCCCAGGTGGTACTTCTACTACACTGGAACCGGACCTGAGGCCAACCTCCCTTTCCGAGCTGTCAAGGACGGAATCATCTGGGTCCATGAGGATGGCGCCACTGATGCTCCT---TCAACTTTTGGGACGCGGAACCCTAACAATGATGCTGCTATTGTT---------ACGCAATTCGCGCCCGGTACTAAGCTTCCT---AAAAACTTCCACATTGAAGGGACTGGAGGCAATAGCCAATCATCTTCAAGA---------------GCGTCTAGTGCCAGCAGAAACTCTTCTAGATCCAATTCCCGAGGT------------------------------------------------TCCAGATCTGGTAACTCCTCCCGCGGCACTTCCCCAGGTCCATCTGGAGTCGGAGCTGTAGGTGGA---------GAAATGCTGTACCTCGATTTGCTTAACAGATTACAGGCTCTG------------------------------------GAATCTGGCAAAACAAAG---CAAGCACAGCCTAAAGTAATAACTAAAAAGGATGCTGTTGCTGCTAAAAACAAGATGCGCCAT---------------------AAGCGTGTCGCCACCAAGGGTTTCAACATGGTGCAAGCTTTCGGTCTGCGTGGCCCAGGCGACCTCCAGGGAAACTTTGGTGATCTCCAACTTAACAAACTTGGCACTGAGGACCCTCGCTGGCCCCAAATTGCTGAGCTTGCCCCATCAGCCAGTGCTTTCATTGGTATGTCTCAATTTAAACTTACCCATCAGAGCAATGATACTGATGGTGCCCCTGTATACTTTCTTCGATACAGTGGTGCCATAAAACTTGACCCAAAGAACCCTAACTACAATAAGTGGTTGGAGCTCATTGAGCAGAATGTTGATGCCTACAAAACTTTC------------CCTAAAAAGGAGAAGAAACAAAAGGCACCTAAAGAA---------------------------------------------------------------------------------------------------------------------------------GAACCATCTGACCAGATGAATGTGCAGCCGCCTAAGGAGCAGCGTGTGCAGGGTAGTATTACCCAGCGCTCCCGCACTCCT---------------------AGGCCTAGTGTGCAGCCTGGTCCTATGACTGATGTTAACACTGAT >Vs_CoV_1_N_BBJ36015_1_NA_Japan_Bat_Bat_coronavirus ---------------------ATGGCCACCCCTGCAGCGCCCCGTGCTGTGACCTTTGGT---------GACAACAATGACAACAATACCAACACTCAGCAGTCTAGAGGCCGAGGAAGAACTCCT------------------------------------------------------AAGCCTAGACCAGCTCCCAATAACACCGTCTCCTGGTACACTGGCCTTACCCAACACGGGAAGGTCCCTCTT---TCCTTTCCACCTGGACAGGGCGTACCTCTTAATGCCAATTCAACCCCTGCACAAAATGCTGGGTATTGGCGGAGACAGGACCGAAAGATTAATACAGGAAATGGAACAAAG---CAGCTGGCTCCCAGGTGGTTCTTCTACTACACTGGAACCGGGCCTGAAGCTAACCTCCCTTTCAGAGCTGTCAAGGATGGAATCGTCTGGGTACACGAAGAAGGTGCTACAGACGCTCCC---TCCACTTTTGGGACGCGTAACCCTAACAACGATGCGGCTATTGTT---------ACACAGTTCGCTCCAGGTACTAAGCTTCCT---AAAAACTTCCACATTGAGGGCACTGGAGGCAACAGTCAGTCATCTTCAAGA---------------GCATCTAGCGCCAGCAGAGGCTCTTCAAGATCTAGCTCAAGAGGT------------------------------------------------GCTCGTTCCGGAAACTCATCCAGAAGTGCTTCCCCAGGTCCAGCTGGAATCGGAGCTGTAGGTGGCGACGCTTCCAGTATTCTCTACCTGAGTTTGCTGAAGAGGCTCGAAGACCTT------------------------------------GAGGCCGGTAAATCT------AAATCAGCACCTAAGGTTGTTACCAAGAAGGATGCTGCTGCTGCTAAAAACAAGATGCGCCAC---------------------AAGCGCGTCGCCACCAAAAGTTTCAACATGGTTCAGGCGTTTGGACGTCGGGGACCAGGCGACCTCCAGGGAAACTTTGGTGACCTACAGTTGAACAAGCTCGGCACAGAAGACCCCCGCTGGCCTCAGATTGCTGAACTCGCTCCCTCAGCCAGCGCTTTCATGGGTATGTCTCAGTTTAAACTAACCCACCAAAGCAATGATGCTGATGGTTCCCCCGTGTACTTTCTTAGATACAGTGGAGCCATAAAACTTGATCCCAAGAACCCCAACTACCAGAAGTGGATGGAGCTGCTTGAGGCAAACATTGATGCCTACAAATCTTTC------------CCAGTTAAGGAGAAGAAACAAAAGGCTGATGATAAC---------------------------------------------------------------------------------------AAACAGGATTCCACTGAAGACAGTGGTGACCTCTTTGCCGAAGTCGTTGCTTCTGCAATGGCCTCACAATCCCAACCACAGCGAGCGCCTAAGGGTTCTATTACCCAGCGCTCTCGTGCTCCC---------------AGAGCTCCTGTGAGTCAGATGGAAGACGTGAATCAGACCGATGATCGTCAG
>16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus -MSDNGTQNQRSASR-ITFGGPSDSTDNNQDGGRSGARPKQR-------- ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG RDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG IVWVAIEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG SRSGSQASSR-----SSSRSRGNSRTSTPG-------------------- -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK KKKTDEA------------------------------------------- ----QPLPQR-KKLPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA >Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus MSDNGPQPSQRSAPR-ITFGGPTDSIDNNQNGGRNGARPKQR-------- ----------RPQGLPNNTASWFTALTQHGKEEL-RFSRGQGVPINTNSG PDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG IVWVATEGALNTPKDHIGTRNPNNNAATV---LQLPQGTTLP-KGFYAEG SRGGSQASSR-----SSSRSRGNSRNSTPG-------------------- -SSRGNSPARMASGGGE----TALALLLLDRLNQL---------ESKVSG KG--QQQGQTVTKKSAAEASKKPRQ-------KRTATKQYNVTQAFGRRG PEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK KKKTDEA------------------------------------------- ----QPLPQRQKKQPIVTLLPAADMDD---FSRQLQNSMSGASADSTQA >Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus -------------MSSVKFE-------------ASGRTGRTP-------- -------------------LSYFAPITVTSGKNLWNVLPKNAVPSGKG-K ANQQVGYWSEQTR-WKMQKGERVEKPSFWHFYFLGTGPHADAKFRERIQG VVWVSKANADLKP-TDLGTRSKARSLIIPKFDIELPDDIEIV-DKSSAPN SRGNSRSQSRGAKSGSKSRGNSQTRDNSKS-RDNSNNRGKSQSRNNSRSR GQQRNNNQQRQGSGNAGNNT-ADLAAAIVLALEKAGLARDT---EKAPKK ESPNNNKKQKSRASSPAPAQSKNTDQLTKVVWKRVPDPSCNVKQCF---G PRSTYQNFGDEDAVEKGVRAKHYPSWAELTPTTAALLFGGEVMTVEDGED I------VIQYTYQMRVPKTTPALQTFL----PQVSAFAN-----SGGDD ASESGQD------------------------------------MPVVTSA AESAAPAPASTPKLNPRAETFVPPKVDPNYFAGMKVEIMNKTISDDSTV >Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus MSDNGPQPSQRSAPR-ITFGGPTDSIDNNQNGGRNGARPKQR-------- ----------RPQGLPNNTASWFTALTQHGKEEL-RFSRGQGVPINTNSG PDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG IVWVATEGALNTPKDHIGTRNPNNNAATV---LQLPQGTTLP-KGFYAEG SRGGSQASSR-----SSSRSRGNSRNSTPG-------------------- -SSRGNSPARMAIGGGE----TALALLLLDRLNQL---------ESKVSG KG--QQQGQTVTKKSAAEASKKPRQ-------KRTATKQYNVTQAFGRRG PEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK KKKTDEA------------------------------------------- ----QPLPQRQKKQPIVTLLPAADMDD---FSRQLQNSMSGASADSTQA >Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus -------------MSSVKFE-------------ASGRTGRTP-------- -------------------LSYFAPITVTSGKNLWNVLPKNAVPSGKG-K ANQQVGYWSEQTR-WKMQKGERVEKPSFWHFYFLGTGPHADAKFRERIQG VVWVSKANADLKP-TDLGTRSKARSLITPKFDIELPDDIEIV-DKSSAPN SRGNSRSQSRGAKSGSKSRGNSQTRDNSKS-RDNSNNRGKSQSRNNSRSR GQQRNNNQQRQGSGNAGNNT-ADLAAAIVLALEKAGLARDT---EKAPKK ESPNNNKKQKSRASSPAPAQSKNTDQLTKVVWKRMPDPSCNVKQCF---G PRSTYQNFGDEEAVEKGVRAKHYPSWAELTPNTAALLFGGEVMTVEDGED I------VIQYTYQMRVPKTTPALQTFL----PQVSAFAN-----ASGDD ESESGQE------------------------------------MPVVTSA AESAAPAPAPTPKLNPKAETFVPPKVDPNYFAGMKVEIMNKTISDDSTV >BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus MSGRNKPRSGTSTPK-VTFKQESDGSD-SESERRASIRPKNK-------G ----SSFKPEKPKAAPPQNVSWFAPLVQTGKNDL-RFPRGQGVPISQGVD PVYNHGYWLRTQRSFQKG-GKLVQANPRWYFYYTGTGRYGDMRYGTKNPD LIWVGEEGANVNRVGDMGTRNPNNDGAIS---VQLHDG--IP-KGFYAEG RNSRSNSRNS-----SRNSSRASSQGNSRA-------------------- -GSRNASPGRNAPNVASGN--EPWMAYLVQKLEAL---------ENKVNG PKE-TKKPVQVTKNEAAANAKKLRH-------KRTPHKGSGVTTNYGRRG PGDLEGNFGDLNMLKLGTDDSRFPAAAQMAPNVASFLFMSHFSVREENDA L------WLHYKGAIKLPKDDPNYDQWTKILGENLNAYKNFPPVEPKKDK KKKEEAS--VEVAVYEDAATGTDQPIVQKIWVKDDGVQTDDEWIGGDDTV YEEEDDKPKAQRRHKKRASTASR--VT----------VADPTNLANERS >BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus -------------MASVSFE------------QQRGRSGRVP-------- -------------------LSFFYPVIVTDNTPFWKVMPNNAVPNGMG-T KDERIGYWNEQKR-WRMRKGQRIDLPSKWHFYFLGTGPHKEASFRQRLDG VYWVAVNGAKTQP-TSLGSRKKSAAMMVPQFSVSLPSNIQVQTENASAPA SRNQSQNR-------SQSANRSQSRGPNQNVNQNQ----------NTNGN QRARSQSRNRGSNNNQPQNQ-VDIVAAVKAALQQLGVGNQNQGGTGKKSK SNSGVNTPKEQRAKSPAKTPPVQRKQMERPVWKRVPNSSENVTACF---G PRDAVHNFGDSDVVHHGTDAKHWPQLAELIPTPAALAFGSEISTTEVGDK V------EITYTYKMKVDKADKNLPAFL----QQVSAYAQ-----P---- -------------------------------------------------- ----SQANQISSQLNPVAPVFTPGMDD-------SVEIIDQVFDTDV-- >BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus -------------MASVSFD-----------DQPRGRGGRMP-------- -------------------LSYYYPIMVTDGKPLFKVLQSNAVPTGKG-T KEQQIGYWNMQAR-WRMVKGVRKDLDPKWHFYYLGTGPHADAPFRQRLEG VFWVAVQGSKTEP-TGLGVRKRNAPLLKPQFSFKLPVNVEIQEDSASRPN SRNPSSNRDR-----SQSGNRSASSGPKQGNSQNQ---NNSSQGNNSNNQ QRSRNNSKSRGQNNQSNNSQ-ADIVAAVKQALKELGVSPQEK--KNKQKG STSGNNTPKEQRSKSPAPSPNTQRKQIERPVWKRVPTSAEDVTVCF---G PRDTQQNFGDQDLVRHGVDAKHYPQLAEFVPGTAALLFGGEVSTRESGED V------EITFHYKLKVKKSDKNLPLFL----QQVSAYAL-----P---- -------------------------------------------------- ----SQAPNIPSQLNPIAPDFTPGFEM----VNETVEIIDQVYDTPDA- >BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus -------------MASVSFD-----------DQSRGRSGRVP-------- -------------------LSFYNPVMVTDDKPLFKVMPHNAVPTGKG-N KSQQIGYWNMQPR-WRMVKGQRKDLTPKWHFYYLGTGPHAEAPFRQKLDG VFWVAVQGSDTQP-TGLGVRKRNQPLIKPQFAVKLPANIEIQEENASKPN SRNPSTNRDR-----SQSGNRSASRGPQQGNTQNQNQNNNSSKGNQNNNQ QRSRNNSKSRSQNNSQPQNQQVDIVAAVKQALKELGVSPQEK--KQKQKG NTSGNNTPKEQRAKSPARSPSSPRKQLERPVWKRVPTEAENVTQCF---G PRDTLRNFGDRELTLRGVEAKNYPQIAEFVPTPAALLFGGEVSTREAGED V------EITFHYKMKVKKDDKNLPLFL----QQVSAYAL-----P---- -------------------------------------------------- ----SQAPNVPSQLNPVAPDFTPSGVE---MVNETVEIIDQVYDSFDA- >BtCoV_Rh_YN2012_Rs4259_N_QBP43285_1_2013_04_17_China_Unknown_Bat_coronavirus -------------MASVSFD-----------DQSRGRSGRVP-------- -------------------LSFYNPVMVTDDKPLFKVMPHNAVPTGKG-N KSQQIGYWNMQPR-WRMVKGQRKDLTPKWHFYYLGTGPHAEAPFRQKLDG VFWVAVQGSDTQP-TGLGVRKRNQPLIKPQFAVKLPANIEIQEENASKPN SRNPSTNRDR-----SQSGNRSASRGPQQGNTQNQNQNNNSSKGNQNNNQ QRSRNNSKSRSQNNSQPQNQQVDIVAAVKQALKELGVSPQEK--KQKQKG NTSGNNTPKEQRAKSPARSPASPRKQLERPVWKRVPTEAENVTQCF---G PRDTLRNFGDRELTLRGVEAKNYPQIAEFVPTPAALLFGGEVSTREAGED V------EITFHYKMKVKKDDKNLPLFL----QQVSAYAL-----P---- -------------------------------------------------- ----SQAPNVPSQLNPVAPDFTPSGVE---MVNETVEIIDQVYDSFDA- >CMR66_NA_AWV67059_1_2013_12_Cameroon_Bat_Bat_coronavirus MSGRNRSRPGTPSPK-VTFKQESDGSD-SESDRRNGNRTGARSKNNNGRS ----SAPRPEKPKAAPLQNVSWFAPLVQTGKSEL-RFARGEGVPVSQGVD PTYEHGYWLRTQRSFQKG-GKQVLANPRWYFYYTGTGRFGDLRFGTKNPD IVWVGQEGANINRLGDMGTRNPSNDSAIP---VQLTGG--IP-KGFYAEG RGSRGNSRSS-----SRNSSRASSRGNSRA-------------------- -GSRGASPGRPAATPSA----EPWMAYLVQKLEKL---------ESQVNG TKPVTKNPLQVTKNEAAANAKKLRH-------KRTAHKGSGVTMNYGRRG PGDLEGNFGDLDMLKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTREEGDA M------WLHYKGAIKLPKDDPNYDQWTKILAENLNAYRDFPPPAPKKDK KKKEETT--QETVIFEDASTGTDQP-VVKVWVKDQDAQTDDEWLGGDETV YEEEDDRPKTQRRHKKRGSTASR--VT----------IADPTNAGAERS >CMR704_P12_N_YP_009824993_1_2013_12_Cameroon_Bat_Bat_coronavirus MSGRRTPR---NQPQ-VSFKNESD-SD-SESGARSQSRGRNSNNNNNGGN GGARRKDKPEKPRAAPAQNVSWFLPIVQTGKQDL-RFARGEGVPVSQGVD ITYQHGYWLRRQRTFNKG-GKQVQANPRWFFYYTGTGPYEGLRYGSRNND IIWVGNEGANVNRLGDMGTRNPANDAGIP---VQLAEG--IP-KGFYAEG RNSRGNSRNS-----SRSSSRGSSNANSRN-------------------- -QSRSNSPGRGSAPPSGG---EPWMAYLIQKLENL---------EQRVDG KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNATQNYGRRG PGNLEGNFGDQEFLKLGTDDPRFPVVAQMAPNTSSFVFMSHFTPRYEADA L------WLDYTGSIKLPRDDPNFPQWEKLLAENIDAYKSFPPPKPKSDK KKKSDKSDSAAGPSEDLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI YEDENDKPKAQRRQSIKKRNATHQRHV----------SIDGAAQSSA-- >CMR705_P13_NA_AWV67075_1_2013_12_Cameroon_Bat_Bat_coronavirus MSGRRTPR---NQPQ-VSFKNESD-SD-SESGARSQSRGRNSNNNNNGGN GGARRKDKPEKPRAAPAQNVSWFLPIVQTGKQDL-RFARGEGVPVSQGVD ITYQHGYWLRRQRTFNKG-GKQVQANPRWFFYYTGTGPYEGLRYGSRNND IIWVGNEGANVNRLGDMGTRNPANDAGIP---VQLAEG--IP-KGFYAEG RNSRGNSRNS-----SRSSSRGSSNANSRN-------------------- -QSRSNSPGRGSAPPSGG---EPWMAYLIQKLENL---------EQRVDG KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNATQNYGRRG PGNLEGNFGDQEFLKLGTDDPRFPVVAQMAPNTSSFVFMSHFTPRYEADA L------WLDYTGSIKLPRDDPNFPQWEKLLAENIDAYKSFPPPKPKSDK KKKSDKSDSAAGPSEDLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI YEDENDKPKAQRRQSIKKRNATHQRHV----------SIDGAAQSSA-- >CMR900_NA_AWV67051_1_2013_12_Cameroon_Bat_Bat_coronavirus MSGRRTPR---NQPQ-VSFKNESD-SD-SESGQRSQSRGRNPNNNNNGGN GGARRKDKPEKPRAAPQQNVSWFLPLVQTGKNDL-RFPRGQGVPITQGVD PTFQHGYWLFRQRSFQKG-GKQVMANPRWYFYYTGTGPYEGLRYGSKSND LIWVGNEGANVNRIGDMGTRNPANDAGLV---VQLADG--IP-KGFYAEG RNSRGNSRNS-----SRSSSRGSSNANSRN-------------------- -QSRSNSPGRGSAPPSGS---EPWMAYLIQKLENL---------EQRVDG KKS-DKQPVKVTKNVASENAKKLRH-------KRTAHKGSNVTQNYGRRG PGNLEGNFGDQDFLKLGTDDPRFPVVAQMAPNTSSFVFMSQFTPRYESDA L------WLDYTGSIKLPRDDPNFPQWEKLLAENLDAYKSFPPPKPKSDK KKKSDKSDSATGPSADLQMQVVDPSGVQRIYMKDAADQTDDEWL-QDDTI YEDENDKPKAQRRQSIKKRNAQRHV------------SIDGSAQSSA-- >JPDB144_N_ANA96046_1_2012_12_China_Bat_Bat_coronavirus -------MATPAAPRTISFA---DNND-NQTNQQQRGRGRNP-------- ----------KPRPAPNNTVSWYTGLTQHGKNPL-AFPPGQGVPLNANST TAQNAGYWRRQDRKINTGNGVK-QLSPRWFFYYTGTGPEANLPFRSVKDG IVWVYEEGATDAP-SVFGTRNPANDAAIV---CQFAPGTLIP-KNFHIEG TGGNSQSSSR-----ASSNSRNSSRSNSRG----------------GRST SNSRGTSPVSHGVGSAESLAALPLLLDLQKRLADL------------ESG K---SKQPKVVTKKDASAAKNKMRH-------KRVATKNFNVTQAFGLRG PGPLQGNFGDMNYNKFGTEDPRWPQMAELAPSASAFMSMSQFKLTHQSND DKGEPIYFLSYSGAIKLDPKNPNYKKWLELLEANIDAYKTF----PKKER KPKTTED---------------------------------GASASSSASQ MEDVDAKPQRKPKSRVAGSITMRSGSS--------PALQDVNFDSEA-- >JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus -MSDNGTQNQRSASR-ITFGGPSDSTDNNQDGGRSGARPKQR-------- ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG TDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG IVWVATEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG SRSGSQASSR-----SSSRSRGNSRTSTPG-------------------- -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK KKKTDEA------------------------------------------- ----QPLPQR-KKQPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA >Jiyuan_84_NA_ARI44812_1_2012_China_Bat_Bat_coronavirus -MSDNGPQNQRSAPR-ITFGGPSDSTDNNQDGGRSGVRPKQR-------- ----------RPQGLPNNTASWFTALTQHGKEGL-KFPQGQGVPINTNSG RDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEG IVWVATEGALNTPKDHIGTRNPNNNAAIV---LQLPQGTTLP-KGFYAEG SRNGSQASSR-----SSSRSRGNSRTSTPG-------------------- -SSRGNSPARVASGGGE----TALALLLLDRLNQL---------ESKVSG KGQ-QQQGQTVTKKSASEASKKPRQ-------KRTATKQYNVTQAFGRRG PDQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG T------WLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDK KKKTDEA------------------------------------------- ----QPLPQRQKKQPTVTLLPAADMDD---FSRQLQNSMSGASADSTQA >PREDICT_PDF_2180_N_ARJ34233_1_2013_02_20_Uganda_Bat_Bat_coronavirus -------MATPAAPRAVSFA---DNND-NSNNNQSRGRGRNP-------- ----------KPRPAPNNTVSWYTGLTQHGKVSL-SFPPGQGVPLNANST PAQNAGYWRRQDRKINTGNGTK-SLAPRWYFYYTGTGPEANLPFRAVKDG IIWVHEDGATDAP-STFGTRNPNNDAAIV---TQFAPGTKLP-KNFHIEG TGGNSQSSSR-----ASSASRNSSRSNSRG----------------SRSG NSSRGTSPGPSGVGAVGG---EMLYLDLLNRLQAL------------ESG KTK-QAQPKVITKKDAVAAKNKMRH-------KRVATKGFNMVQAFGLRG PGDLQGNFGDLQLNKLGTEDPRWPQIAELAPSASAFIGMSQFKLTHQSND TDGAPVYFLRYSGAIKLDPKNPNYNKWLELIEQNVDAYKTF----PKKEK KQKAPKE------------------------------------------- EPSDQMNVQPPKEQRVQGSITQRSRTP-------RPSVQPGPMTDVNTD >Vs_CoV_1_N_BBJ36015_1_NA_Japan_Bat_Bat_coronavirus -------MATPAAPRAVTFG---DNNDNNTNTQQSRGRGRTP-------- ----------KPRPAPNNTVSWYTGLTQHGKVPL-SFPPGQGVPLNANST PAQNAGYWRRQDRKINTGNGTK-QLAPRWFFYYTGTGPEANLPFRAVKDG IVWVHEEGATDAP-STFGTRNPNNDAAIV---TQFAPGTKLP-KNFHIEG TGGNSQSSSR-----ASSASRGSSRSSSRG----------------ARSG NSSRSASPGPAGIGAVGGDASSILYLSLLKRLEDL------------EAG KS--KSAPKVVTKKDAAAAKNKMRH-------KRVATKSFNMVQAFGRRG PGDLQGNFGDLQLNKLGTEDPRWPQIAELAPSASAFMGMSQFKLTHQSND ADGSPVYFLRYSGAIKLDPKNPNYQKWMELLEANIDAYKSF----PVKEK KQKADDN-----------------------------KQDSTEDSGDLFAE VVASAMASQSQPQRAPKGSITQRSRAP-----RAPVSQMEDVNQTDDRQ
Reading sequence file /data//pss_subsets/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result/original_alignment/fubar/fasta/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1
Found 19 sequences of length 1647
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 49.8%
Found 1240 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0% 15.5% 29.7% 42.5% 54.1% 64.4% 73.4% 81.1% 87.4% 92.5% 96.3% 98.7% 99.9%100.0%
Using a window size of 80 with k as 60
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 600 polymorphic sites
**p-Value(s)**
----------
NSS: 0.00e+00 (1000 permutations)
Max Chi^2: 0.00e+00 (1000 permutations)
PHI (Permutation): 1.00e+00 (1000 permutations)
PHI (Normal): 1.00e+00
#NEXUS
[ID: 2394125210]
begin taxa;
dimensions ntax=19;
taxlabels
16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus
BtCoV_Rh_YN2012_Rs4259_N_QBP43285_1_2013_04_17_China_Unknown_Bat_coronavirus
CMR66_NA_AWV67059_1_2013_12_Cameroon_Bat_Bat_coronavirus
CMR704_P12_N_YP_009824993_1_2013_12_Cameroon_Bat_Bat_coronavirus
CMR705_P13_NA_AWV67075_1_2013_12_Cameroon_Bat_Bat_coronavirus
CMR900_NA_AWV67051_1_2013_12_Cameroon_Bat_Bat_coronavirus
JPDB144_N_ANA96046_1_2012_12_China_Bat_Bat_coronavirus
JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus
Jiyuan_84_NA_ARI44812_1_2012_China_Bat_Bat_coronavirus
PREDICT_PDF_2180_N_ARJ34233_1_2013_02_20_Uganda_Bat_Bat_coronavirus
Vs_CoV_1_N_BBJ36015_1_NA_Japan_Bat_Bat_coronavirus
Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus
Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus
Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus
Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus
BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus
BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus
BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus
BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus
;
end;
begin trees;
translate
1 16BO133_N_ASO66816_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus,
2 BtCoV_Rh_YN2012_Rs4259_N_QBP43285_1_2013_04_17_China_Unknown_Bat_coronavirus,
3 CMR66_NA_AWV67059_1_2013_12_Cameroon_Bat_Bat_coronavirus,
4 CMR704_P12_N_YP_009824993_1_2013_12_Cameroon_Bat_Bat_coronavirus,
5 CMR705_P13_NA_AWV67075_1_2013_12_Cameroon_Bat_Bat_coronavirus,
6 CMR900_NA_AWV67051_1_2013_12_Cameroon_Bat_Bat_coronavirus,
7 JPDB144_N_ANA96046_1_2012_12_China_Bat_Bat_coronavirus,
8 JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus,
9 Jiyuan_84_NA_ARI44812_1_2012_China_Bat_Bat_coronavirus,
10 PREDICT_PDF_2180_N_ARJ34233_1_2013_02_20_Uganda_Bat_Bat_coronavirus,
11 Vs_CoV_1_N_BBJ36015_1_NA_Japan_Bat_Bat_coronavirus,
12 Anlong_103_NA_ARI44802_1_2013_China_Bat_Bat_coronavirus,
13 Anlong_43_NA_ARI44792_1_2013_China_Bat_Bat_coronavirus,
14 Anlong_112_NA_ARI44807_1_2013_China_Bat_Bat_coronavirus,
15 Anlong_57_NA_ARI44797_1_2013_China_Bat_Bat_coronavirus,
16 BtCoV92_N_QEH60467_1_2015_Singapore_Bat_Bat_coronavirus,
17 BtCoV_Rh_YN2012_Ra13591_N_QBP43296_1_2013_06_01_China_Unknown_Bat_coronavirus,
18 BtCoV_Rh_YN2012_Rs3376_N_QBP43263_1_2012_05_19_China_Unknown_Bat_coronavirus,
19 BtCoV_Rh_YN2012_Rs4125_N_QBP43274_1_2012_09_16_China_Unknown_Bat_coronavirus
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:7.299698e-03,8:6.700066e-03,((((((((2:2.961439e-03,19:7.939731e-03)1.000:2.151710e-01,18:2.314354e-01)0.975:1.878679e-01,17:4.733826e-01)0.697:2.194563e-01,(13:1.382512e-02,15:2.660890e-02)1.000:1.101955e+00)1.000:2.260289e+00,((3:3.051481e-01,16:2.240239e-01)1.000:1.884402e-01,((4:1.073815e-03,5:1.043834e-03)1.000:1.453118e-01,6:1.014143e-01)1.000:2.343255e-01)1.000:3.816529e-01)0.990:3.640796e-01,(7:2.266530e-01,(10:1.282644e-01,11:1.433915e-01)0.966:7.645839e-02)1.000:4.494432e-01)1.000:7.659963e-01,(12:1.017117e-03,14:1.047381e-03)0.932:1.864629e-02)0.999:7.889111e-02,9:1.492283e-02)1.000:1.328989e-02);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:7.299698e-03,8:6.700066e-03,((((((((2:2.961439e-03,19:7.939731e-03):2.151710e-01,18:2.314354e-01):1.878679e-01,17:4.733826e-01):2.194563e-01,(13:1.382512e-02,15:2.660890e-02):1.101955e+00):2.260289e+00,((3:3.051481e-01,16:2.240239e-01):1.884402e-01,((4:1.073815e-03,5:1.043834e-03):1.453118e-01,6:1.014143e-01):2.343255e-01):3.816529e-01):3.640796e-01,(7:2.266530e-01,(10:1.282644e-01,11:1.433915e-01):7.645839e-02):4.494432e-01):7.659963e-01,(12:1.017117e-03,14:1.047381e-03):1.864629e-02):7.889111e-02,9:1.492283e-02):1.328989e-02);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -10099.67 -10119.81
2 -10100.19 -10122.33
--------------------------------------
TOTAL -10099.90 -10121.72
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 8.712615 0.443487 7.429567 9.971106 8.666142 915.88 944.14 1.001
r(A<->C){all} 0.171104 0.000167 0.147341 0.196500 0.170936 657.74 786.85 1.000
r(A<->G){all} 0.238035 0.000227 0.209421 0.268090 0.237725 753.04 808.25 1.002
r(A<->T){all} 0.121690 0.000120 0.101374 0.143463 0.121390 750.78 866.16 1.000
r(C<->G){all} 0.086293 0.000111 0.065996 0.106374 0.085743 913.95 925.77 1.000
r(C<->T){all} 0.306111 0.000300 0.272822 0.340617 0.305777 695.49 752.91 1.002
r(G<->T){all} 0.076767 0.000092 0.058932 0.095508 0.076489 1030.79 1045.69 1.000
pi(A){all} 0.288423 0.000066 0.272913 0.305252 0.288331 761.88 787.10 1.002
pi(C){all} 0.242808 0.000059 0.228529 0.258006 0.242826 878.44 901.95 1.000
pi(G){all} 0.226230 0.000071 0.209656 0.241788 0.226209 603.04 687.17 1.000
pi(T){all} 0.242539 0.000067 0.227203 0.258865 0.242487 794.06 846.52 1.002
alpha{1,2} 0.648669 0.003697 0.535503 0.772369 0.645780 1043.15 1150.48 1.000
alpha{3} 6.863887 2.934357 3.952215 10.399960 6.642874 1364.80 1432.90 1.000
pinvar{all} 0.012587 0.000070 0.000033 0.028559 0.011293 1125.60 1215.38 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
[2J[H /HYPHY 2.3.14.20190214beta(MP) for Linux on x86_64\ ***************** TYPES OF STANDARD ANALYSES ***************** (1) Selection Analyses (2) Evolutionary Hypothesis Testing (3) Relative evolutionary rate inference (4) Coevolutionary analysis (5) Basic Analyses (6) Codon Selection Analyses (7) Compartmentalization (8) Data File Tools (9) Miscellaneous (10) Model Comparison (11) Kernel Analysis Tools (12) Molecular Clock (13) Phylogeny Reconstruction (14) Positive Selection (15) Recombination (16) Selection/Recombination (17) Relative Rate (18) Relative Ratio (19) Substitution Rates Please select type of analyses you want to list (or press ENTER to process custom batch file):[2J[H***************** FILES IN 'Selection Analyses' ***************** (1) [MEME] Test for episodic site-level selection using MEME (Mixed Effects Model of Evolution). (2) [FEL] Test for pervasive site-level selection using FEL (Fixed Effects Likelihood). (3) [SLAC] Test for pervasive site-level selection using SLAC (Single Likelihood Ancestor Counting). (4) [FUBAR] Test for pervasive site-level selection using FUBAR (Fast Unconstrained Bayesian AppRoximation for inferring selection). (5) [BUSTED] Test for episodic gene-wide selection using BUSTED (Branch-site Unrestricted Statistical Test of Episodic Diversification). (6) [aBSREL] Test for lineage-specific evolution using the branch-site method aBS-REL (Adaptive Branch-Site Random Effects Likelihood). (7) [RELAX] Test for relaxation of selection pressure along a specified set of test branches using RELAX (a random effects test of selection relaxation). Please select the analysis you would like to perform (or press ENTER to return to the list of analysis types): Analysis Description -------------------- Perform a Fast Unbiased AppRoximate Bayesian (FUBAR) analysis of a coding sequence alignment to determine whether some sites have been subject to pervasive purifying or diversifying selection. v2.1 introduces two more methods for estimating the posterior distribution of grid weights: collapsed Gibbs MCMC (faster) and 0-th order Variation Bayes approximation (fastest). Please note that a FUBAR analysis generates a cache and a results JSON file in the same directory as directory as the original alignment. HyPhy needs to have write privileges to this directory. For example if the original file is in /home/sergei/FUBAR/data/pol.nex then at the end of a FUBAR run, there will also exist FUBAR-generated files /home/sergei/FUBAR/data/pol.nex.FUBAR.json, /home/sergei/FUBAR/data/pol.nex.fubrar.cache. They also provide checkpointing so that a partially completed analysis can be restarted. - __Requirements__: in-frame codon alignment (possibly partitioned) and a phylogenetic tree (one per partition) - __Citation__: FUBAR: a fast, unconstrained bayesian approximation for inferring selection (2013), Mol Biol Evol. 30(5):1196-205 - __Written by__: Sergei L Kosakovsky Pond - __Contact Information__: spond@temple.edu - __Analysis Version__: 2.1 ####Choose Genetic Code 1. [**Universal**] Universal code. (Genebank transl_table=1). 2. [**Vertebrate mtDNA**] Vertebrate mitochondrial DNA code. (Genebank transl_table=2). 3. [**Yeast mtDNA**] Yeast mitochondrial DNA code. (Genebank transl_table=3). 4. [**Mold/Protozoan mtDNA**] Mold, Protozoan and Coelenterate mitochondrial DNA and the Mycloplasma/Spiroplasma code. (Genebank transl_table=4). 5. [**Invertebrate mtDNA**] Invertebrate mitochondrial DNA code. (Genebank transl_table=5). 6. [**Ciliate Nuclear**] Ciliate, Dasycladacean and Hexamita Nuclear code. (Genebank transl_table=6). 7. [**Echinoderm mtDNA**] Echinoderm mitochondrial DNA code. (Genebank transl_table=9). 8. [**Euplotid Nuclear**] Euplotid Nuclear code. (Genebank transl_table=10). 9. [**Alt. Yeast Nuclear**] Alternative Yeast Nuclear code. (Genebank transl_table=12). 10. [**Ascidian mtDNA**] Ascidian mitochondrial DNA code. (Genebank transl_table=13). 11. [**Flatworm mtDNA**] Flatworm mitochondrial DNA code. (Genebank transl_table=14). 12. [**Blepharisma Nuclear**] Blepharisma Nuclear code. (Genebank transl_table=15). 13. [**Chlorophycean mtDNA**] Chlorophycean Mitochondrial Code (transl_table=16). 14. [**Trematode mtDNA**] Trematode Mitochondrial Code (transl_table=21). 15. [**Scenedesmus obliquus mtDNA**] Scenedesmus obliquus mitochondrial Code (transl_table=22). 16. [**Thraustochytrium mtDNA**] Thraustochytrium Mitochondrial Code (transl_table=23). 17. [**Pterobranchia mtDNA**] Pterobranchia Mitochondrial Code (transl_table=24). 18. [**SR1 and Gracilibacteria**] Candidate Division SR1 and Gracilibacteria Code (transl_table=25). 19. [**Pachysolen Nuclear**] Pachysolen tannophilus Nuclear Code (transl_table=26). >Please choose an option (or press q to cancel selection): >Select a coding sequence alignment file (`/usr/local/lib/hyphy/TemplateBatchFiles/SelectionAnalyses/`) >A tree was found in the data file: `(C1,C16,((((((((C10,C9),C8),C7),(C3,C5)),((C11,C6),((C12,C13),C14))),(C15,(C18,C19))),(C2,C4)),C17))` >Would you like to use it (y/n)? >Loaded a multiple sequence alignment with **19** sequences, **549** codons, and **1** partitions from `/data//pss_subsets/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result/original_alignment/fubar/results/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1.fna` > FUBAR will write cache and result files to _/data//pss_subsets/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result/original_alignment/fubar/results/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1.fna.FUBAR.cache_ and _/data//pss_subsets/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result/original_alignment/fubar/results/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1/JTMC15_N_ANA96035_1_2013_08_China_Bat_Bat_coronavirus.result.1.fna.FUBAR.json_, respectively > Number of grid points per dimension (total number is D^2) (permissible range = [5,50], default value = 20, integer): ####Posterior estimation method 1. [**Metropolis-Hastings**] Full Metropolis-Hastings MCMC algorithm (slowest, original 2013 paper implementation) 2. [**Collapsed Gibbs**] Collapsed Gibbs sampler (intermediate speed) 3. [**Variational Bayes**] 0-th order Variational Bayes approximations (fastest, recommended default) >Please choose an option (or press q to cancel selection):> The concentration parameter of the Dirichlet prior (permissible range = [0.001,1], default value = 0.5): ### Obtaining branch lengths and nucleotide substitution biases under the nucleotide GTR model * Log(L) = -16301.86, AIC-c = 32689.84 (43 estimated parameters) * Tree length (expected substitutions/site) for partition 1 : 4.255 ### Computing the phylogenetic likelihood function on the grid * Determining appropriate tree scaling based on the best score from a 20 x 20 rate grid * Best scaling achieved for * synonymous rate = 2.815 * non-synonymous rate = 0.643 * Computing conditional site likelihoods on a 20 x 20 rate grid ### Running an iterative zeroth order variational Bayes procedure to estimate the posterior mean of rate weights * Using the following settings * Dirichlet alpha : 0.5 ### Tabulating site-level results | Codon | Partition | alpha | beta |Posterior prob for positive selection| |:--------------:|:--------------:|:--------------:|:--------------:|:-----------------------------------:| | 261 | 1 | 0.614 | 3.812 | Pos. posterior = 0.9726 | ---- ## FUBAR inferred 1 sites subject to diversifying positive selection at posterior probability >= 0.9 Of these, 0.03 are expected to be false positives (95% confidence interval of 0-1 )
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
