--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -3353.76 -3381.67
2 -3353.22 -3381.76
--------------------------------------
TOTAL -3353.46 -3381.72
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.125966 0.000228 0.096178 0.154020 0.124839 1251.47 1333.43 1.000
r(A<->C){all} 0.073817 0.000686 0.027303 0.127495 0.071447 711.27 791.83 1.000
r(A<->G){all} 0.149888 0.001396 0.080895 0.222200 0.146406 785.17 806.37 1.000
r(A<->T){all} 0.039014 0.000238 0.012295 0.069225 0.037261 965.54 990.59 1.001
r(C<->G){all} 0.012156 0.000127 0.000006 0.034829 0.009062 665.59 700.55 1.000
r(C<->T){all} 0.698561 0.002239 0.602661 0.786275 0.701504 473.74 631.36 1.000
r(G<->T){all} 0.026564 0.000146 0.006474 0.050202 0.024738 956.51 995.26 1.000
pi(A){all} 0.256177 0.000104 0.236184 0.276509 0.256190 1046.05 1163.50 1.001
pi(C){all} 0.201485 0.000084 0.184127 0.219935 0.201337 1114.94 1137.98 1.000
pi(G){all} 0.217413 0.000092 0.198128 0.235541 0.217072 1008.66 1164.35 1.000
pi(T){all} 0.324926 0.000118 0.303402 0.345888 0.324931 1128.93 1149.91 1.000
alpha{1,2} 0.057968 0.001435 0.000041 0.124628 0.054835 827.51 841.18 1.000
alpha{3} 3.700031 2.233710 1.193617 6.577905 3.450016 1433.85 1467.43 1.000
pinvar{all} 0.730191 0.001345 0.659978 0.806316 0.733019 1080.81 1127.32 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -3221.395556
Model 2: PositiveSelection -3221.395255
Model 7: beta -3221.404719
Model 8: beta&w>1 -3221.406544
Model 2 vs 1 .000602
Model 8 vs 7 -.003650
-- Starting log on Thu Nov 17 16:36:39 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_nsp10_VIPR_ALG4_672096710_15373_17163_1_2012_02_China_Swine_PEDV.result--
-- Starting log on Thu Nov 17 16:39:30 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_nsp10_VIPR_ALG4_672096710_15373_17163_1_2012_02_China_Swine_PEDV.result--
-- Starting log on Fri Nov 18 00:08:25 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/LZW_nsp10_VIPR_ALG4_672096710_15373_17163_1_2012_02_China_Swine_PEDV.result/gapped_alignment/codeml,LZW_nsp10_VIPR_ALG4_672096710_15373_17163_1_2012_02_China_Swine_PEDV.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 30 taxa and 1791 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C321
Taxon 2 -> C66
Taxon 3 -> C523
Taxon 4 -> C287
Taxon 5 -> C327
Taxon 6 -> C72
Taxon 7 -> C8
Taxon 8 -> C240
Taxon 9 -> C78
Taxon 10 -> C591
Taxon 11 -> C242
Taxon 12 -> C325
Taxon 13 -> C316
Taxon 14 -> C559
Taxon 15 -> C50
Taxon 16 -> C370
Taxon 17 -> C391
Taxon 18 -> C112
Taxon 19 -> C385
Taxon 20 -> C369
Taxon 21 -> C463
Taxon 22 -> C595
Taxon 23 -> C493
Taxon 24 -> C607
Taxon 25 -> C388
Taxon 26 -> C130
Taxon 27 -> C23
Taxon 28 -> C263
Taxon 29 -> C108
Taxon 30 -> C392
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668730107
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1845416454
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 0217044692
Seed = 1614664846
Swapseed = 1668730107
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 15 unique site patterns
Division 2 has 7 unique site patterns
Division 3 has 70 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -5457.760619 -- 82.122948
Chain 2 -- -5378.830124 -- 82.122948
Chain 3 -- -5377.373504 -- 82.122948
Chain 4 -- -5366.791922 -- 82.122948
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -5290.987200 -- 82.122948
Chain 2 -- -5367.076394 -- 82.122948
Chain 3 -- -5512.520021 -- 82.122948
Chain 4 -- -5314.714260 -- 82.122948
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-5457.761] (-5378.830) (-5377.374) (-5366.792) * [-5290.987] (-5367.076) (-5512.520) (-5314.714)
1000 -- [-3536.257] (-3581.818) (-3576.177) (-3581.245) * [-3516.217] (-3583.926) (-3596.107) (-3573.715) -- 0:16:39
2000 -- (-3459.306) (-3457.486) [-3446.700] (-3443.532) * [-3442.985] (-3464.512) (-3482.018) (-3498.370) -- 0:16:38
3000 -- (-3464.572) (-3418.918) [-3398.926] (-3415.154) * (-3415.804) [-3410.320] (-3456.705) (-3446.547) -- 0:16:37
4000 -- (-3410.931) [-3399.432] (-3376.554) (-3431.680) * [-3405.903] (-3404.677) (-3437.075) (-3430.539) -- 0:16:36
5000 -- (-3415.018) (-3396.399) [-3366.756] (-3391.779) * [-3404.473] (-3384.372) (-3420.364) (-3410.104) -- 0:16:35
Average standard deviation of split frequencies: 0.085994
6000 -- (-3388.301) (-3387.111) [-3365.241] (-3383.976) * [-3390.403] (-3370.408) (-3393.774) (-3387.805) -- 0:16:34
7000 -- (-3399.948) (-3378.234) (-3370.458) [-3365.960] * [-3373.567] (-3391.349) (-3383.680) (-3379.153) -- 0:16:33
8000 -- (-3374.779) [-3374.524] (-3369.479) (-3369.645) * (-3373.492) (-3372.431) (-3385.717) [-3377.448] -- 0:16:32
9000 -- (-3370.006) (-3375.277) (-3377.560) [-3354.380] * (-3371.819) (-3383.895) [-3374.365] (-3369.574) -- 0:14:40
10000 -- [-3363.709] (-3366.287) (-3383.330) (-3375.041) * (-3382.558) (-3388.367) (-3385.720) [-3362.035] -- 0:14:51
Average standard deviation of split frequencies: 0.074835
11000 -- (-3373.094) (-3366.321) (-3383.466) [-3375.909] * [-3365.542] (-3372.820) (-3384.116) (-3370.175) -- 0:14:59
12000 -- [-3370.208] (-3368.698) (-3385.145) (-3374.171) * (-3367.539) (-3379.925) (-3385.071) [-3363.615] -- 0:15:05
13000 -- (-3369.395) (-3366.714) (-3377.321) [-3370.372] * [-3357.888] (-3363.903) (-3380.365) (-3373.511) -- 0:15:11
14000 -- [-3365.691] (-3378.960) (-3378.760) (-3386.337) * [-3362.954] (-3378.106) (-3373.510) (-3377.610) -- 0:15:15
15000 -- [-3370.483] (-3372.035) (-3371.992) (-3395.283) * [-3360.783] (-3364.608) (-3361.386) (-3386.298) -- 0:15:19
Average standard deviation of split frequencies: 0.069902
16000 -- (-3367.305) [-3365.502] (-3373.969) (-3377.078) * [-3357.662] (-3369.728) (-3361.865) (-3379.722) -- 0:15:22
17000 -- (-3380.182) [-3360.801] (-3383.027) (-3378.438) * [-3356.938] (-3377.072) (-3379.141) (-3376.401) -- 0:15:25
18000 -- (-3373.761) (-3374.345) (-3369.836) [-3369.861] * (-3371.888) [-3371.943] (-3382.313) (-3375.007) -- 0:15:27
19000 -- [-3368.591] (-3378.283) (-3374.471) (-3366.460) * (-3386.900) [-3366.708] (-3363.832) (-3380.408) -- 0:14:37
20000 -- [-3371.409] (-3378.324) (-3375.221) (-3376.090) * (-3380.449) [-3367.178] (-3371.970) (-3378.947) -- 0:14:42
Average standard deviation of split frequencies: 0.064959
21000 -- (-3367.967) [-3376.256] (-3382.506) (-3378.450) * [-3360.963] (-3376.737) (-3397.271) (-3381.381) -- 0:14:45
22000 -- [-3375.962] (-3368.216) (-3378.845) (-3387.836) * [-3364.925] (-3373.484) (-3388.581) (-3375.597) -- 0:14:49
23000 -- [-3362.597] (-3375.618) (-3361.090) (-3392.159) * (-3374.093) (-3367.527) [-3367.592] (-3379.877) -- 0:14:52
24000 -- (-3359.611) (-3388.910) [-3367.108] (-3396.269) * (-3368.553) (-3368.660) [-3366.932] (-3381.018) -- 0:14:54
25000 -- [-3366.398] (-3371.878) (-3371.099) (-3376.962) * (-3365.095) (-3381.556) [-3364.342] (-3367.520) -- 0:14:57
Average standard deviation of split frequencies: 0.048129
26000 -- (-3385.275) [-3358.626] (-3392.568) (-3367.145) * (-3383.960) (-3381.219) [-3371.823] (-3379.841) -- 0:14:59
27000 -- (-3372.261) [-3370.350] (-3389.842) (-3368.869) * [-3364.572] (-3386.144) (-3381.285) (-3363.455) -- 0:15:00
28000 -- (-3379.546) (-3379.682) [-3355.564] (-3367.552) * [-3359.211] (-3367.547) (-3387.726) (-3365.974) -- 0:14:27
29000 -- (-3378.760) (-3372.834) (-3360.443) [-3369.630] * [-3348.671] (-3372.551) (-3379.581) (-3361.844) -- 0:14:30
30000 -- [-3359.662] (-3369.621) (-3380.898) (-3369.358) * [-3362.121] (-3376.239) (-3370.147) (-3373.749) -- 0:14:33
Average standard deviation of split frequencies: 0.042426
31000 -- (-3368.353) (-3378.594) [-3372.991] (-3375.483) * (-3359.547) [-3364.472] (-3385.377) (-3362.156) -- 0:14:35
32000 -- [-3365.714] (-3389.491) (-3374.192) (-3369.924) * [-3358.953] (-3366.787) (-3380.942) (-3364.511) -- 0:14:37
33000 -- (-3363.094) [-3358.240] (-3371.248) (-3365.940) * [-3363.238] (-3368.588) (-3370.835) (-3383.214) -- 0:14:39
34000 -- (-3363.757) (-3391.868) [-3361.841] (-3371.036) * (-3390.533) [-3374.521] (-3363.068) (-3373.490) -- 0:14:40
35000 -- [-3362.185] (-3375.642) (-3359.922) (-3368.166) * [-3368.308] (-3394.222) (-3366.179) (-3366.311) -- 0:14:42
Average standard deviation of split frequencies: 0.041612
36000 -- (-3371.856) (-3379.711) [-3368.262] (-3373.901) * (-3363.992) (-3402.355) (-3378.337) [-3352.383] -- 0:14:43
37000 -- (-3372.919) (-3379.662) [-3360.510] (-3381.253) * (-3385.840) (-3387.297) [-3358.346] (-3358.881) -- 0:14:44
38000 -- (-3375.043) [-3359.420] (-3366.592) (-3372.758) * (-3384.339) (-3373.005) (-3387.009) [-3359.828] -- 0:14:20
39000 -- (-3361.589) (-3368.501) [-3348.774] (-3386.459) * (-3386.735) [-3359.201] (-3374.585) (-3377.473) -- 0:14:22
40000 -- (-3380.933) [-3363.430] (-3365.196) (-3385.578) * (-3367.828) [-3368.822] (-3364.926) (-3375.195) -- 0:14:24
Average standard deviation of split frequencies: 0.038253
41000 -- [-3376.791] (-3397.449) (-3368.537) (-3366.691) * (-3379.203) (-3394.544) [-3372.646] (-3362.133) -- 0:14:25
42000 -- (-3381.729) (-3395.712) [-3365.148] (-3367.866) * (-3364.425) [-3372.151] (-3382.907) (-3360.998) -- 0:14:26
43000 -- [-3367.164] (-3373.701) (-3361.162) (-3377.790) * [-3362.935] (-3377.626) (-3385.688) (-3359.592) -- 0:14:27
44000 -- (-3389.065) [-3369.395] (-3361.623) (-3355.140) * (-3378.561) (-3375.554) (-3376.975) [-3369.589] -- 0:14:29
45000 -- (-3375.790) (-3366.113) (-3364.862) [-3366.875] * (-3363.453) [-3361.973] (-3362.147) (-3383.990) -- 0:14:30
Average standard deviation of split frequencies: 0.026995
46000 -- (-3372.675) (-3362.747) (-3371.500) [-3356.879] * (-3362.194) [-3360.456] (-3367.453) (-3382.186) -- 0:14:31
47000 -- (-3389.918) (-3371.118) [-3363.910] (-3379.004) * (-3352.732) [-3357.510] (-3391.094) (-3378.765) -- 0:14:11
48000 -- (-3378.870) [-3365.952] (-3362.334) (-3373.469) * (-3375.120) [-3365.015] (-3390.322) (-3373.978) -- 0:14:12
49000 -- (-3378.312) (-3381.610) [-3370.359] (-3363.915) * (-3375.374) [-3356.029] (-3377.268) (-3382.467) -- 0:14:13
50000 -- (-3372.440) [-3372.596] (-3370.224) (-3385.493) * (-3379.346) [-3366.578] (-3366.229) (-3386.106) -- 0:14:15
Average standard deviation of split frequencies: 0.031013
51000 -- (-3368.889) [-3359.608] (-3366.242) (-3363.179) * (-3407.395) (-3373.908) (-3372.173) [-3359.454] -- 0:14:15
52000 -- [-3358.477] (-3362.207) (-3372.620) (-3365.341) * (-3390.245) (-3378.366) (-3389.621) [-3370.770] -- 0:14:16
53000 -- [-3355.948] (-3376.737) (-3374.433) (-3384.068) * (-3388.926) (-3372.681) (-3378.572) [-3361.479] -- 0:14:17
54000 -- [-3353.961] (-3378.774) (-3377.281) (-3380.212) * (-3364.147) (-3384.928) [-3367.473] (-3365.440) -- 0:14:18
55000 -- (-3369.778) (-3371.801) [-3369.829] (-3372.668) * (-3373.839) (-3372.731) [-3364.515] (-3364.749) -- 0:14:19
Average standard deviation of split frequencies: 0.030127
56000 -- (-3362.630) (-3357.653) (-3382.554) [-3384.894] * [-3369.532] (-3372.897) (-3382.031) (-3373.953) -- 0:14:02
57000 -- (-3361.576) [-3360.630] (-3367.993) (-3380.039) * (-3374.120) [-3371.296] (-3397.740) (-3366.963) -- 0:14:03
58000 -- (-3363.775) (-3367.164) (-3379.264) [-3357.429] * [-3382.530] (-3381.472) (-3386.990) (-3363.263) -- 0:14:04
59000 -- (-3361.339) [-3359.469] (-3365.544) (-3375.119) * (-3374.981) (-3370.141) [-3360.623] (-3367.633) -- 0:14:05
60000 -- (-3377.897) [-3368.567] (-3368.375) (-3381.786) * (-3387.906) (-3382.861) (-3357.215) [-3375.208] -- 0:14:06
Average standard deviation of split frequencies: 0.027196
61000 -- [-3367.131] (-3369.735) (-3378.682) (-3369.269) * (-3375.630) (-3375.485) [-3370.212] (-3373.334) -- 0:14:06
62000 -- (-3373.978) (-3390.750) [-3360.376] (-3362.760) * [-3376.600] (-3370.080) (-3381.798) (-3389.696) -- 0:14:07
63000 -- (-3392.879) [-3374.454] (-3359.115) (-3368.690) * (-3370.805) (-3388.392) [-3361.231] (-3385.164) -- 0:14:07
64000 -- (-3383.449) [-3370.331] (-3350.216) (-3379.197) * (-3361.363) (-3389.582) (-3368.325) [-3364.314] -- 0:14:08
65000 -- (-3365.132) (-3369.850) [-3359.175] (-3368.534) * (-3375.556) (-3381.755) (-3363.938) [-3357.613] -- 0:13:54
Average standard deviation of split frequencies: 0.022743
66000 -- (-3376.786) (-3374.905) (-3380.406) [-3373.312] * [-3381.403] (-3373.508) (-3356.682) (-3381.556) -- 0:13:54
67000 -- (-3376.286) [-3366.995] (-3365.665) (-3380.968) * (-3379.373) [-3374.708] (-3359.167) (-3377.025) -- 0:13:55
68000 -- (-3374.014) (-3386.611) [-3364.728] (-3368.138) * (-3383.763) [-3364.397] (-3376.588) (-3365.028) -- 0:13:56
69000 -- (-3380.328) (-3366.074) (-3381.972) [-3367.438] * (-3373.161) (-3364.090) (-3379.701) [-3359.705] -- 0:13:56
70000 -- (-3383.028) (-3373.345) (-3371.589) [-3357.518] * (-3374.061) (-3364.393) [-3365.514] (-3379.029) -- 0:13:57
Average standard deviation of split frequencies: 0.023718
71000 -- (-3384.186) (-3388.015) [-3366.601] (-3371.625) * [-3373.074] (-3381.521) (-3363.838) (-3369.388) -- 0:13:57
72000 -- (-3363.875) (-3364.690) [-3362.605] (-3392.196) * (-3378.356) (-3368.945) (-3376.057) [-3360.791] -- 0:13:44
73000 -- [-3374.856] (-3376.301) (-3371.156) (-3360.474) * (-3376.639) [-3363.345] (-3382.561) (-3378.834) -- 0:13:45
74000 -- (-3372.747) (-3361.047) [-3360.981] (-3368.001) * [-3365.214] (-3367.230) (-3396.087) (-3391.077) -- 0:13:45
75000 -- (-3378.702) [-3356.944] (-3353.545) (-3377.412) * (-3379.690) [-3362.375] (-3374.106) (-3367.497) -- 0:13:46
Average standard deviation of split frequencies: 0.024643
76000 -- [-3390.841] (-3356.910) (-3379.918) (-3368.817) * (-3367.432) (-3374.702) [-3370.919] (-3361.452) -- 0:13:46
77000 -- (-3391.242) (-3372.687) (-3375.373) [-3368.476] * (-3365.787) (-3383.745) (-3363.973) [-3368.558] -- 0:13:47
78000 -- (-3383.772) (-3364.658) (-3370.677) [-3364.296] * (-3375.682) (-3373.755) [-3364.589] (-3373.707) -- 0:13:47
79000 -- (-3388.002) (-3376.476) (-3372.707) [-3362.856] * [-3362.200] (-3373.398) (-3376.526) (-3371.961) -- 0:13:47
80000 -- (-3370.086) (-3382.231) (-3388.023) [-3357.080] * (-3361.011) [-3378.748] (-3392.266) (-3383.171) -- 0:13:48
Average standard deviation of split frequencies: 0.022374
81000 -- (-3361.896) [-3364.022] (-3393.039) (-3371.117) * (-3369.163) (-3374.985) (-3387.991) [-3372.598] -- 0:13:36
82000 -- (-3371.214) [-3366.074] (-3376.726) (-3371.973) * [-3356.784] (-3404.745) (-3394.899) (-3366.078) -- 0:13:37
83000 -- (-3366.555) (-3371.880) [-3366.737] (-3364.530) * (-3382.570) (-3379.739) [-3363.807] (-3369.794) -- 0:13:37
84000 -- (-3365.964) [-3361.847] (-3369.103) (-3374.205) * (-3374.259) [-3373.434] (-3376.708) (-3376.103) -- 0:13:37
85000 -- (-3376.630) (-3378.850) (-3372.500) [-3366.508] * [-3352.659] (-3379.459) (-3377.367) (-3359.460) -- 0:13:38
Average standard deviation of split frequencies: 0.022070
86000 -- (-3387.927) (-3383.193) (-3370.201) [-3370.597] * (-3373.314) (-3381.979) (-3378.318) [-3359.726] -- 0:13:38
87000 -- (-3376.292) (-3371.409) (-3366.196) [-3360.636] * (-3374.315) (-3365.945) (-3370.685) [-3359.344] -- 0:13:38
88000 -- [-3369.926] (-3362.103) (-3365.235) (-3364.269) * (-3360.212) [-3359.824] (-3377.142) (-3368.362) -- 0:13:28
89000 -- (-3366.681) (-3378.714) (-3378.249) [-3361.928] * (-3375.694) [-3366.936] (-3379.383) (-3374.229) -- 0:13:28
90000 -- [-3372.648] (-3398.558) (-3366.981) (-3365.178) * (-3384.796) (-3374.678) [-3362.791] (-3385.284) -- 0:13:28
Average standard deviation of split frequencies: 0.020955
91000 -- [-3365.811] (-3387.991) (-3367.114) (-3381.499) * (-3371.252) (-3362.510) (-3369.201) [-3369.318] -- 0:13:29
92000 -- (-3368.522) [-3377.186] (-3367.745) (-3372.144) * (-3363.376) [-3365.578] (-3372.234) (-3366.231) -- 0:13:29
93000 -- [-3365.407] (-3376.984) (-3361.644) (-3377.223) * [-3376.893] (-3387.124) (-3368.921) (-3371.653) -- 0:13:29
94000 -- (-3362.006) (-3384.665) (-3404.036) [-3379.464] * [-3367.189] (-3369.685) (-3369.252) (-3369.907) -- 0:13:29
95000 -- [-3363.947] (-3381.859) (-3364.221) (-3395.666) * (-3381.079) (-3375.281) [-3355.156] (-3366.548) -- 0:13:29
Average standard deviation of split frequencies: 0.019493
96000 -- [-3361.946] (-3382.443) (-3363.910) (-3375.659) * (-3383.805) (-3370.919) (-3379.733) [-3364.971] -- 0:13:20
97000 -- (-3363.820) (-3396.404) [-3365.203] (-3364.918) * [-3359.656] (-3376.689) (-3378.542) (-3370.978) -- 0:13:20
98000 -- (-3379.338) (-3383.472) (-3366.388) [-3366.306] * [-3359.604] (-3367.141) (-3367.166) (-3381.633) -- 0:13:20
99000 -- (-3384.493) (-3379.315) (-3363.641) [-3366.443] * (-3375.421) (-3371.692) (-3379.647) [-3361.840] -- 0:13:20
100000 -- (-3372.875) [-3370.717] (-3373.270) (-3373.876) * [-3355.831] (-3364.124) (-3361.713) (-3370.856) -- 0:13:21
Average standard deviation of split frequencies: 0.020150
101000 -- [-3357.937] (-3390.850) (-3379.836) (-3372.519) * (-3361.642) (-3390.446) [-3357.700] (-3387.033) -- 0:13:21
102000 -- (-3370.580) (-3370.459) [-3380.889] (-3362.758) * (-3368.522) [-3375.382] (-3368.448) (-3372.506) -- 0:13:21
103000 -- (-3377.773) (-3389.481) [-3371.036] (-3372.933) * (-3373.525) [-3378.884] (-3374.743) (-3372.683) -- 0:13:21
104000 -- (-3375.163) [-3366.662] (-3373.888) (-3365.938) * (-3371.173) (-3378.400) [-3366.237] (-3377.300) -- 0:13:21
105000 -- [-3350.829] (-3371.784) (-3375.832) (-3361.461) * [-3368.048] (-3370.313) (-3376.465) (-3376.520) -- 0:13:12
Average standard deviation of split frequencies: 0.021158
106000 -- (-3363.092) (-3378.778) [-3361.787] (-3369.208) * (-3386.675) (-3360.551) [-3367.922] (-3370.311) -- 0:13:12
107000 -- (-3360.082) (-3386.504) [-3368.582] (-3369.504) * (-3387.874) (-3367.104) (-3369.898) [-3362.086] -- 0:13:12
108000 -- (-3377.662) (-3369.493) (-3378.784) [-3364.381] * (-3371.340) (-3367.072) [-3365.115] (-3383.099) -- 0:13:12
109000 -- (-3381.039) (-3363.452) [-3367.705] (-3377.413) * (-3374.818) [-3366.141] (-3367.997) (-3377.851) -- 0:13:12
110000 -- [-3372.601] (-3379.732) (-3357.221) (-3376.502) * [-3372.328] (-3371.442) (-3378.679) (-3398.037) -- 0:13:12
Average standard deviation of split frequencies: 0.021298
111000 -- [-3354.469] (-3376.347) (-3378.392) (-3365.135) * (-3373.636) (-3362.650) [-3366.584] (-3380.026) -- 0:13:12
112000 -- (-3366.919) (-3371.263) [-3371.168] (-3367.157) * (-3365.230) [-3375.034] (-3362.787) (-3366.484) -- 0:13:12
113000 -- (-3366.813) (-3375.152) (-3378.292) [-3364.249] * (-3375.998) (-3373.362) [-3355.828] (-3375.520) -- 0:13:04
114000 -- (-3364.795) (-3373.476) (-3374.123) [-3358.796] * (-3377.554) (-3374.933) (-3379.362) [-3366.651] -- 0:13:04
115000 -- (-3371.944) [-3368.122] (-3379.362) (-3361.385) * [-3373.905] (-3369.913) (-3364.069) (-3379.046) -- 0:13:04
Average standard deviation of split frequencies: 0.021674
116000 -- (-3380.240) (-3376.536) (-3363.164) [-3365.043] * [-3367.549] (-3368.572) (-3367.731) (-3379.213) -- 0:13:04
117000 -- (-3367.543) (-3367.950) (-3377.187) [-3363.384] * [-3367.147] (-3383.115) (-3363.964) (-3376.526) -- 0:13:04
118000 -- (-3380.695) (-3381.653) [-3371.256] (-3369.725) * (-3370.471) [-3366.471] (-3378.386) (-3368.940) -- 0:13:04
119000 -- (-3369.711) (-3383.578) [-3372.255] (-3364.072) * (-3367.566) [-3360.346] (-3371.189) (-3377.843) -- 0:13:04
120000 -- (-3364.679) [-3389.106] (-3372.848) (-3370.916) * [-3363.719] (-3360.758) (-3368.108) (-3369.843) -- 0:13:04
Average standard deviation of split frequencies: 0.022966
121000 -- (-3368.639) (-3371.413) (-3374.857) [-3355.624] * (-3378.522) [-3365.694] (-3367.696) (-3387.985) -- 0:12:57
122000 -- (-3381.422) (-3372.956) [-3371.430] (-3365.045) * (-3381.907) [-3371.321] (-3363.695) (-3379.016) -- 0:12:57
123000 -- (-3380.812) [-3354.223] (-3374.091) (-3378.899) * [-3368.655] (-3370.777) (-3372.213) (-3369.981) -- 0:12:57
124000 -- (-3358.926) [-3365.395] (-3369.334) (-3374.214) * [-3366.486] (-3375.789) (-3367.193) (-3377.563) -- 0:12:57
125000 -- (-3364.657) [-3366.635] (-3394.155) (-3381.745) * (-3370.027) [-3375.121] (-3363.381) (-3378.272) -- 0:12:57
Average standard deviation of split frequencies: 0.022558
126000 -- [-3363.142] (-3361.654) (-3372.528) (-3390.909) * (-3373.697) (-3372.611) (-3380.476) [-3368.444] -- 0:12:56
127000 -- (-3375.364) [-3356.617] (-3366.403) (-3367.412) * (-3374.710) (-3381.729) [-3372.370] (-3367.114) -- 0:12:56
128000 -- (-3362.357) (-3365.972) (-3385.880) [-3374.137] * (-3374.358) (-3390.664) [-3369.610] (-3378.830) -- 0:12:56
129000 -- (-3364.370) (-3356.447) (-3376.429) [-3376.866] * (-3378.610) (-3386.117) [-3350.672] (-3379.858) -- 0:12:56
130000 -- [-3365.766] (-3363.579) (-3372.253) (-3372.923) * [-3367.497] (-3377.808) (-3357.266) (-3383.291) -- 0:12:49
Average standard deviation of split frequencies: 0.020444
131000 -- (-3366.864) (-3381.080) [-3369.095] (-3373.297) * (-3382.920) (-3388.319) [-3356.767] (-3379.456) -- 0:12:49
132000 -- (-3373.492) (-3388.694) [-3365.202] (-3387.320) * (-3377.622) [-3366.339] (-3363.104) (-3367.833) -- 0:12:49
133000 -- [-3361.489] (-3377.750) (-3363.589) (-3375.934) * [-3366.866] (-3367.743) (-3370.156) (-3381.853) -- 0:12:49
134000 -- [-3352.582] (-3372.181) (-3364.100) (-3387.535) * [-3359.800] (-3368.052) (-3365.830) (-3388.022) -- 0:12:49
135000 -- [-3353.234] (-3373.749) (-3370.212) (-3389.398) * (-3365.142) [-3364.940] (-3375.337) (-3369.565) -- 0:12:48
Average standard deviation of split frequencies: 0.019747
136000 -- (-3364.362) (-3368.997) [-3380.582] (-3384.835) * [-3365.418] (-3368.568) (-3355.288) (-3383.707) -- 0:12:48
137000 -- (-3375.307) [-3374.108] (-3377.981) (-3402.401) * (-3368.820) (-3382.394) [-3370.229] (-3369.165) -- 0:12:48
138000 -- (-3370.562) (-3375.469) [-3380.731] (-3374.953) * (-3369.321) (-3371.889) [-3355.967] (-3352.943) -- 0:12:48
139000 -- (-3361.740) (-3373.169) [-3358.355] (-3374.632) * (-3372.929) (-3376.441) (-3365.812) [-3370.443] -- 0:12:41
140000 -- (-3356.045) (-3374.230) (-3371.368) [-3371.722] * [-3369.975] (-3373.277) (-3364.893) (-3362.248) -- 0:12:41
Average standard deviation of split frequencies: 0.018686
141000 -- (-3364.443) [-3374.466] (-3372.081) (-3390.826) * (-3382.592) [-3362.108] (-3366.095) (-3364.628) -- 0:12:41
142000 -- [-3381.997] (-3368.626) (-3377.127) (-3380.537) * (-3375.973) (-3374.247) (-3380.330) [-3365.557] -- 0:12:41
143000 -- (-3383.418) [-3374.011] (-3374.279) (-3366.261) * [-3365.154] (-3380.615) (-3369.884) (-3372.676) -- 0:12:41
144000 -- (-3370.847) (-3385.101) (-3382.636) [-3373.270] * [-3365.373] (-3361.958) (-3362.461) (-3371.408) -- 0:12:40
145000 -- (-3368.792) (-3396.377) (-3359.874) [-3369.324] * (-3377.119) (-3383.902) (-3377.715) [-3367.001] -- 0:12:40
Average standard deviation of split frequencies: 0.019960
146000 -- [-3376.375] (-3395.215) (-3368.645) (-3373.401) * (-3396.517) (-3393.622) (-3368.666) [-3360.729] -- 0:12:46
147000 -- (-3373.208) (-3380.592) [-3366.541] (-3383.651) * (-3372.566) (-3369.417) (-3384.855) [-3368.103] -- 0:12:45
148000 -- (-3363.309) (-3395.518) [-3370.450] (-3396.264) * (-3368.188) (-3379.975) (-3380.689) [-3355.915] -- 0:12:51
149000 -- (-3367.856) (-3387.271) [-3354.963] (-3386.040) * (-3377.236) (-3376.587) (-3369.842) [-3363.698] -- 0:12:51
150000 -- (-3370.901) [-3372.467] (-3364.959) (-3366.147) * [-3373.025] (-3384.080) (-3382.136) (-3366.939) -- 0:12:50
Average standard deviation of split frequencies: 0.020195
151000 -- (-3370.651) [-3375.725] (-3372.888) (-3375.753) * [-3365.187] (-3391.239) (-3368.728) (-3368.495) -- 0:12:50
152000 -- [-3366.952] (-3375.642) (-3365.730) (-3372.031) * [-3367.519] (-3375.629) (-3374.400) (-3375.120) -- 0:12:49
153000 -- [-3373.378] (-3367.171) (-3371.216) (-3371.868) * (-3368.612) (-3385.039) (-3375.194) [-3367.318] -- 0:12:49
154000 -- [-3353.406] (-3379.906) (-3366.607) (-3364.720) * (-3390.344) (-3378.748) (-3378.419) [-3374.201] -- 0:12:49
155000 -- [-3348.933] (-3370.763) (-3357.414) (-3371.971) * [-3361.598] (-3377.822) (-3361.333) (-3373.322) -- 0:12:48
Average standard deviation of split frequencies: 0.018955
156000 -- [-3366.126] (-3381.563) (-3369.670) (-3375.813) * (-3374.217) (-3359.593) (-3368.013) [-3367.576] -- 0:12:48
157000 -- [-3367.019] (-3382.084) (-3360.234) (-3365.003) * (-3362.467) (-3385.423) (-3368.866) [-3363.827] -- 0:12:47
158000 -- (-3374.831) (-3381.612) [-3358.852] (-3367.603) * [-3368.839] (-3372.166) (-3363.572) (-3360.660) -- 0:12:47
159000 -- (-3377.619) [-3370.337] (-3365.388) (-3383.653) * (-3372.492) [-3360.353] (-3373.510) (-3369.658) -- 0:12:41
160000 -- (-3371.787) (-3382.037) (-3392.366) [-3375.864] * (-3364.556) [-3361.005] (-3370.384) (-3368.051) -- 0:12:41
Average standard deviation of split frequencies: 0.018316
161000 -- (-3369.003) (-3375.623) [-3364.220] (-3373.057) * (-3372.437) (-3368.632) [-3371.715] (-3368.092) -- 0:12:40
162000 -- [-3360.893] (-3369.685) (-3368.486) (-3357.012) * (-3365.245) (-3364.112) (-3372.575) [-3368.147] -- 0:12:40
163000 -- [-3358.101] (-3374.035) (-3378.767) (-3366.643) * (-3377.338) [-3363.200] (-3367.121) (-3370.642) -- 0:12:39
164000 -- (-3383.672) (-3378.509) [-3359.282] (-3358.368) * [-3370.112] (-3372.387) (-3372.566) (-3389.183) -- 0:12:39
165000 -- (-3377.533) [-3377.345] (-3359.677) (-3364.790) * [-3371.620] (-3378.058) (-3374.506) (-3385.818) -- 0:12:39
Average standard deviation of split frequencies: 0.017125
166000 -- (-3385.372) (-3380.849) [-3354.041] (-3386.883) * [-3357.227] (-3381.960) (-3380.084) (-3375.533) -- 0:12:38
167000 -- (-3384.191) (-3369.332) [-3361.525] (-3384.927) * (-3377.016) (-3384.541) (-3382.385) [-3365.398] -- 0:12:33
168000 -- (-3379.893) (-3361.939) [-3355.954] (-3373.878) * (-3369.139) [-3376.475] (-3387.364) (-3375.075) -- 0:12:32
169000 -- (-3364.470) (-3377.018) [-3363.699] (-3363.053) * [-3363.501] (-3366.664) (-3392.893) (-3371.187) -- 0:12:32
170000 -- (-3361.442) [-3370.118] (-3361.008) (-3369.772) * (-3378.383) [-3370.160] (-3379.831) (-3390.985) -- 0:12:31
Average standard deviation of split frequencies: 0.019000
171000 -- [-3366.980] (-3385.568) (-3366.985) (-3383.517) * (-3385.418) [-3366.256] (-3381.038) (-3380.464) -- 0:12:31
172000 -- (-3377.055) [-3370.648] (-3372.605) (-3374.363) * (-3383.694) [-3361.858] (-3373.594) (-3366.932) -- 0:12:30
173000 -- (-3376.362) (-3381.195) [-3361.166] (-3369.589) * [-3363.480] (-3368.525) (-3367.811) (-3377.543) -- 0:12:30
174000 -- [-3381.478] (-3390.829) (-3369.573) (-3374.358) * (-3360.338) (-3370.035) (-3374.637) [-3355.647] -- 0:12:30
175000 -- (-3386.528) [-3374.258] (-3368.730) (-3378.640) * (-3366.192) [-3374.838] (-3380.425) (-3368.932) -- 0:12:29
Average standard deviation of split frequencies: 0.019398
176000 -- (-3381.836) (-3389.318) [-3357.769] (-3384.574) * (-3371.931) [-3363.162] (-3380.718) (-3377.150) -- 0:12:24
177000 -- [-3364.597] (-3410.105) (-3360.680) (-3377.831) * (-3379.898) (-3367.952) (-3393.384) [-3367.638] -- 0:12:23
178000 -- (-3363.433) (-3376.330) [-3358.010] (-3369.376) * [-3368.093] (-3359.187) (-3375.626) (-3368.107) -- 0:12:23
179000 -- (-3362.066) [-3363.903] (-3378.698) (-3368.711) * [-3356.481] (-3374.857) (-3383.229) (-3366.925) -- 0:12:23
180000 -- (-3363.307) [-3360.198] (-3378.669) (-3387.786) * (-3371.372) (-3367.405) (-3390.830) [-3365.641] -- 0:12:22
Average standard deviation of split frequencies: 0.018581
181000 -- (-3379.999) (-3355.633) (-3378.157) [-3367.405] * (-3355.782) (-3376.025) (-3377.634) [-3355.696] -- 0:12:22
182000 -- (-3378.329) (-3360.069) [-3362.878] (-3379.019) * [-3366.440] (-3382.091) (-3370.367) (-3357.686) -- 0:12:21
183000 -- (-3374.561) (-3360.040) [-3369.112] (-3374.621) * (-3373.684) (-3368.545) (-3376.760) [-3351.390] -- 0:12:16
184000 -- [-3360.399] (-3371.222) (-3386.192) (-3365.138) * (-3375.034) (-3383.857) [-3362.254] (-3365.479) -- 0:12:16
185000 -- [-3370.001] (-3370.162) (-3382.279) (-3370.404) * [-3361.544] (-3381.911) (-3364.956) (-3370.342) -- 0:12:15
Average standard deviation of split frequencies: 0.019123
186000 -- (-3370.096) (-3396.583) [-3368.561] (-3369.895) * (-3370.060) (-3379.746) [-3368.440] (-3369.005) -- 0:12:15
187000 -- (-3376.200) (-3375.715) (-3367.628) [-3373.579] * (-3384.816) (-3373.789) [-3369.196] (-3363.338) -- 0:12:14
188000 -- (-3368.054) (-3375.703) [-3364.484] (-3360.834) * (-3363.352) (-3385.737) [-3378.275] (-3377.483) -- 0:12:14
189000 -- (-3363.196) [-3372.148] (-3374.774) (-3379.414) * [-3372.977] (-3385.361) (-3382.911) (-3374.306) -- 0:12:13
190000 -- (-3376.663) (-3381.064) [-3374.200] (-3379.340) * (-3382.544) [-3366.428] (-3372.667) (-3383.501) -- 0:12:13
Average standard deviation of split frequencies: 0.017007
191000 -- (-3370.600) (-3374.987) [-3369.118] (-3376.063) * (-3378.509) (-3375.943) (-3371.147) [-3372.225] -- 0:12:08
192000 -- [-3363.027] (-3379.970) (-3364.888) (-3368.725) * (-3363.138) (-3365.429) [-3370.183] (-3396.914) -- 0:12:08
193000 -- (-3370.711) (-3381.897) (-3365.525) [-3359.154] * [-3376.838] (-3371.764) (-3387.137) (-3381.875) -- 0:12:07
194000 -- (-3362.099) (-3372.821) (-3380.840) [-3362.624] * (-3381.128) [-3366.667] (-3388.454) (-3376.087) -- 0:12:07
195000 -- (-3373.401) [-3354.812] (-3370.168) (-3352.176) * [-3373.413] (-3374.453) (-3373.766) (-3381.671) -- 0:12:06
Average standard deviation of split frequencies: 0.017638
196000 -- (-3378.385) (-3364.587) (-3364.791) [-3364.388] * (-3372.175) [-3360.499] (-3384.846) (-3379.038) -- 0:12:06
197000 -- (-3370.354) (-3361.728) (-3370.747) [-3369.136] * (-3378.048) (-3367.819) (-3382.255) [-3365.477] -- 0:12:05
198000 -- (-3383.724) (-3358.157) [-3354.668] (-3363.637) * (-3381.577) (-3381.438) [-3367.835] (-3360.521) -- 0:12:05
199000 -- [-3366.373] (-3385.560) (-3364.930) (-3375.054) * (-3387.135) (-3361.165) (-3378.751) [-3362.588] -- 0:12:04
200000 -- (-3366.392) (-3373.035) [-3368.247] (-3371.921) * (-3386.820) (-3371.707) (-3373.050) [-3368.017] -- 0:12:04
Average standard deviation of split frequencies: 0.016800
201000 -- (-3377.692) (-3366.932) [-3369.676] (-3381.078) * (-3396.451) (-3371.533) [-3369.551] (-3376.204) -- 0:12:07
202000 -- [-3374.803] (-3372.945) (-3362.155) (-3381.573) * (-3381.837) [-3368.445] (-3373.186) (-3385.825) -- 0:12:06
203000 -- (-3375.166) (-3375.832) [-3362.999] (-3397.166) * (-3383.836) [-3366.900] (-3380.519) (-3386.278) -- 0:12:06
204000 -- [-3357.337] (-3366.896) (-3378.226) (-3402.007) * (-3380.194) (-3364.254) (-3373.187) [-3363.570] -- 0:12:09
205000 -- (-3369.547) [-3371.516] (-3365.866) (-3376.632) * (-3369.082) (-3369.040) (-3379.654) [-3362.959] -- 0:12:09
Average standard deviation of split frequencies: 0.016227
206000 -- (-3373.848) [-3363.358] (-3374.024) (-3376.734) * (-3366.213) (-3373.353) [-3366.886] (-3368.118) -- 0:12:08
207000 -- (-3366.482) (-3370.047) [-3359.752] (-3386.999) * (-3377.241) [-3361.791] (-3365.745) (-3384.170) -- 0:12:11
208000 -- (-3364.002) (-3358.059) (-3369.047) [-3374.338] * (-3376.779) (-3361.136) [-3368.992] (-3366.475) -- 0:12:11
209000 -- (-3367.213) (-3377.896) [-3355.768] (-3377.323) * [-3358.840] (-3367.815) (-3358.467) (-3393.978) -- 0:12:14
210000 -- (-3366.118) [-3370.643] (-3379.462) (-3377.515) * [-3365.681] (-3378.574) (-3357.180) (-3383.681) -- 0:12:13
Average standard deviation of split frequencies: 0.016952
211000 -- [-3364.834] (-3376.211) (-3375.704) (-3369.380) * (-3381.053) (-3379.569) [-3362.316] (-3388.857) -- 0:12:12
212000 -- (-3371.264) [-3370.330] (-3356.240) (-3373.807) * (-3375.076) (-3381.757) (-3370.686) [-3360.082] -- 0:12:15
213000 -- (-3374.034) [-3358.313] (-3363.255) (-3372.462) * [-3362.376] (-3364.021) (-3363.632) (-3373.503) -- 0:12:15
214000 -- (-3380.162) (-3366.796) [-3353.443] (-3372.445) * [-3362.622] (-3389.856) (-3367.940) (-3371.786) -- 0:12:14
215000 -- (-3370.694) (-3378.102) [-3354.462] (-3379.994) * [-3365.833] (-3379.848) (-3374.204) (-3375.760) -- 0:12:17
Average standard deviation of split frequencies: 0.014946
216000 -- [-3359.423] (-3377.851) (-3360.581) (-3371.355) * [-3358.483] (-3378.781) (-3361.295) (-3362.265) -- 0:12:16
217000 -- (-3368.397) (-3378.729) [-3367.377] (-3378.063) * (-3363.571) (-3375.797) [-3353.768] (-3368.042) -- 0:12:16
218000 -- (-3390.816) (-3357.496) (-3362.812) [-3377.388] * (-3379.218) (-3365.177) [-3376.063] (-3376.870) -- 0:12:18
219000 -- (-3380.085) (-3385.331) (-3377.091) [-3376.381] * [-3371.566] (-3385.056) (-3358.039) (-3373.417) -- 0:12:18
220000 -- (-3373.294) (-3383.067) [-3378.612] (-3366.105) * (-3378.818) (-3372.973) [-3360.614] (-3372.167) -- 0:12:21
Average standard deviation of split frequencies: 0.015148
221000 -- (-3364.707) [-3361.613] (-3367.195) (-3361.330) * (-3387.412) (-3363.158) [-3363.756] (-3389.731) -- 0:12:20
222000 -- (-3368.643) [-3359.695] (-3358.953) (-3368.739) * (-3372.803) (-3374.213) [-3360.870] (-3367.517) -- 0:12:19
223000 -- (-3384.553) (-3362.451) [-3361.655] (-3377.101) * (-3375.931) (-3376.863) [-3355.320] (-3385.496) -- 0:12:22
224000 -- (-3375.294) (-3353.886) (-3375.388) [-3359.769] * (-3369.248) [-3371.647] (-3370.108) (-3392.157) -- 0:12:21
225000 -- (-3370.100) [-3359.408] (-3361.538) (-3363.273) * (-3387.331) [-3366.449] (-3367.529) (-3380.730) -- 0:12:20
Average standard deviation of split frequencies: 0.014356
226000 -- (-3379.642) [-3361.778] (-3370.883) (-3376.693) * (-3377.738) (-3381.094) (-3375.860) [-3378.165] -- 0:12:23
227000 -- (-3374.350) (-3375.459) (-3375.615) [-3361.926] * (-3386.186) [-3361.891] (-3372.935) (-3367.818) -- 0:12:22
228000 -- (-3378.034) (-3366.998) (-3368.923) [-3367.543] * (-3377.600) (-3393.473) [-3362.499] (-3377.914) -- 0:12:21
229000 -- (-3374.270) [-3368.368] (-3366.369) (-3378.919) * (-3372.030) (-3388.089) [-3355.759] (-3369.340) -- 0:12:24
230000 -- (-3366.954) (-3382.361) (-3372.463) [-3371.814] * (-3378.799) (-3370.835) [-3360.576] (-3378.834) -- 0:12:23
Average standard deviation of split frequencies: 0.013584
231000 -- [-3371.008] (-3388.284) (-3364.019) (-3388.268) * [-3366.638] (-3362.674) (-3372.292) (-3384.118) -- 0:12:25
232000 -- (-3382.393) [-3377.568] (-3374.925) (-3375.819) * (-3384.316) [-3370.999] (-3358.949) (-3386.370) -- 0:12:24
233000 -- (-3369.545) (-3384.955) (-3381.154) [-3354.495] * (-3376.903) (-3380.293) (-3361.628) [-3354.379] -- 0:12:23
234000 -- (-3373.015) (-3376.046) (-3374.592) [-3361.892] * (-3383.434) (-3387.836) [-3357.898] (-3369.696) -- 0:12:26
235000 -- (-3379.132) (-3372.000) (-3378.957) [-3356.110] * (-3372.374) (-3364.748) [-3367.020] (-3386.665) -- 0:12:25
Average standard deviation of split frequencies: 0.013042
236000 -- (-3359.769) (-3377.996) [-3365.063] (-3374.980) * (-3367.989) [-3379.050] (-3363.708) (-3375.383) -- 0:12:24
237000 -- (-3381.223) (-3357.793) (-3363.659) [-3361.296] * (-3364.084) (-3378.107) [-3360.680] (-3368.429) -- 0:12:23
238000 -- (-3391.558) (-3371.308) [-3367.645] (-3381.791) * (-3371.544) (-3393.215) (-3379.381) [-3374.818] -- 0:12:22
239000 -- (-3363.504) (-3379.532) [-3355.565] (-3377.123) * (-3386.210) (-3381.360) (-3374.429) [-3364.463] -- 0:12:21
240000 -- (-3378.329) [-3363.044] (-3372.968) (-3379.937) * (-3388.623) (-3367.370) (-3375.727) [-3360.826] -- 0:12:21
Average standard deviation of split frequencies: 0.013654
241000 -- (-3376.470) (-3371.054) [-3366.015] (-3368.105) * (-3387.519) (-3359.718) (-3374.693) [-3361.989] -- 0:12:20
242000 -- (-3380.676) (-3371.620) [-3359.823] (-3387.321) * (-3375.328) [-3357.703] (-3366.249) (-3367.657) -- 0:12:22
243000 -- (-3371.315) [-3361.522] (-3368.946) (-3367.026) * (-3363.113) (-3364.125) (-3371.816) [-3366.700] -- 0:12:21
244000 -- (-3380.062) [-3366.791] (-3380.224) (-3358.803) * (-3363.822) (-3376.937) [-3358.765] (-3379.189) -- 0:12:23
245000 -- (-3378.862) (-3376.754) (-3381.507) [-3369.188] * (-3368.684) (-3388.148) [-3362.617] (-3379.339) -- 0:12:22
Average standard deviation of split frequencies: 0.013865
246000 -- [-3354.376] (-3381.311) (-3373.459) (-3373.687) * [-3359.842] (-3373.505) (-3378.522) (-3370.724) -- 0:12:21
247000 -- [-3362.559] (-3389.329) (-3366.974) (-3388.075) * (-3383.976) (-3366.181) [-3371.265] (-3373.257) -- 0:12:23
248000 -- [-3363.353] (-3379.750) (-3382.463) (-3384.650) * (-3373.399) (-3377.567) [-3358.479] (-3381.215) -- 0:12:22
249000 -- [-3373.597] (-3366.125) (-3385.541) (-3365.570) * (-3373.896) (-3393.547) [-3367.676] (-3375.731) -- 0:12:24
250000 -- (-3379.271) (-3385.923) [-3357.590] (-3371.945) * (-3368.228) (-3382.397) [-3367.910] (-3390.660) -- 0:12:24
Average standard deviation of split frequencies: 0.015045
251000 -- (-3361.336) (-3369.443) [-3364.593] (-3384.971) * [-3363.664] (-3375.494) (-3366.971) (-3376.189) -- 0:12:23
252000 -- [-3372.742] (-3373.684) (-3368.753) (-3369.908) * (-3372.297) [-3375.587] (-3367.625) (-3375.229) -- 0:12:25
253000 -- (-3374.643) (-3365.835) (-3380.222) [-3370.855] * (-3379.821) (-3370.150) [-3374.256] (-3396.789) -- 0:12:24
254000 -- [-3362.449] (-3367.417) (-3376.386) (-3382.545) * (-3362.438) (-3355.711) [-3363.997] (-3376.283) -- 0:12:23
255000 -- (-3371.273) [-3360.566] (-3383.828) (-3369.698) * (-3372.097) [-3361.835] (-3375.687) (-3400.054) -- 0:12:25
Average standard deviation of split frequencies: 0.013560
256000 -- (-3380.503) [-3364.150] (-3370.529) (-3372.800) * (-3364.773) (-3368.682) (-3364.213) [-3367.747] -- 0:12:24
257000 -- (-3376.326) [-3361.377] (-3376.026) (-3378.661) * (-3368.621) (-3375.144) [-3388.214] (-3379.435) -- 0:12:23
258000 -- (-3377.630) [-3352.643] (-3373.622) (-3374.353) * (-3374.470) (-3376.065) [-3372.980] (-3375.169) -- 0:12:22
259000 -- (-3371.006) [-3379.411] (-3373.114) (-3398.581) * [-3369.539] (-3375.832) (-3362.646) (-3366.956) -- 0:12:23
260000 -- [-3361.572] (-3371.974) (-3373.743) (-3379.556) * (-3377.175) [-3359.335] (-3368.062) (-3387.659) -- 0:12:22
Average standard deviation of split frequencies: 0.014242
261000 -- (-3374.089) (-3391.773) [-3366.440] (-3382.460) * (-3376.033) (-3377.870) [-3364.429] (-3381.841) -- 0:12:21
262000 -- (-3376.718) [-3360.411] (-3373.450) (-3364.650) * [-3367.687] (-3382.630) (-3362.797) (-3379.354) -- 0:12:23
263000 -- [-3372.991] (-3353.739) (-3380.521) (-3374.069) * (-3380.730) (-3375.046) (-3364.358) [-3367.910] -- 0:12:22
264000 -- (-3374.767) (-3390.565) [-3368.531] (-3379.046) * (-3367.813) [-3370.615] (-3380.307) (-3386.333) -- 0:12:24
265000 -- [-3362.134] (-3402.012) (-3362.441) (-3386.301) * (-3370.202) (-3362.852) [-3361.846] (-3373.812) -- 0:12:23
Average standard deviation of split frequencies: 0.015174
266000 -- (-3362.778) (-3368.909) [-3347.211] (-3374.522) * [-3359.036] (-3379.206) (-3381.405) (-3377.961) -- 0:12:22
267000 -- (-3381.306) (-3369.286) (-3364.138) [-3370.910] * [-3363.213] (-3378.241) (-3371.465) (-3369.189) -- 0:12:21
268000 -- (-3386.866) (-3370.362) [-3361.641] (-3364.519) * (-3367.887) (-3393.076) (-3371.732) [-3366.191] -- 0:12:22
269000 -- (-3367.320) (-3401.521) (-3371.228) [-3368.878] * (-3363.939) [-3369.010] (-3376.198) (-3391.010) -- 0:12:21
270000 -- (-3355.992) (-3371.066) [-3359.843] (-3371.337) * (-3370.547) [-3359.681] (-3373.289) (-3369.504) -- 0:12:20
Average standard deviation of split frequencies: 0.015728
271000 -- (-3356.610) (-3384.503) [-3367.359] (-3376.868) * (-3369.264) [-3363.257] (-3380.184) (-3378.057) -- 0:12:22
272000 -- (-3365.399) [-3370.495] (-3370.921) (-3362.695) * (-3379.293) (-3371.703) [-3362.328] (-3370.662) -- 0:12:21
273000 -- (-3372.642) (-3384.120) (-3364.925) [-3365.876] * (-3372.399) (-3363.984) (-3374.355) [-3365.962] -- 0:12:20
274000 -- (-3380.283) (-3364.720) [-3353.752] (-3366.158) * (-3363.481) [-3363.567] (-3367.245) (-3367.707) -- 0:12:19
275000 -- (-3377.060) (-3371.592) [-3354.347] (-3364.795) * (-3376.221) [-3356.210] (-3368.452) (-3365.676) -- 0:12:20
Average standard deviation of split frequencies: 0.015372
276000 -- (-3384.449) (-3367.832) (-3374.903) [-3365.487] * (-3388.974) (-3366.179) (-3368.662) [-3364.936] -- 0:12:19
277000 -- [-3364.459] (-3379.854) (-3381.949) (-3372.690) * [-3372.319] (-3375.542) (-3359.256) (-3372.432) -- 0:12:18
278000 -- [-3367.633] (-3375.935) (-3382.367) (-3371.490) * [-3358.853] (-3371.795) (-3378.495) (-3384.514) -- 0:12:20
279000 -- [-3364.380] (-3394.655) (-3373.393) (-3367.386) * (-3362.370) [-3376.678] (-3362.055) (-3387.020) -- 0:12:19
280000 -- (-3366.541) (-3385.983) (-3366.240) [-3355.903] * [-3357.791] (-3375.572) (-3367.443) (-3375.058) -- 0:12:18
Average standard deviation of split frequencies: 0.013909
281000 -- (-3365.751) (-3377.004) (-3396.639) [-3357.883] * [-3349.993] (-3384.555) (-3369.127) (-3358.419) -- 0:12:16
282000 -- [-3367.196] (-3371.881) (-3365.924) (-3373.979) * (-3377.450) (-3372.475) [-3362.379] (-3367.322) -- 0:12:15
283000 -- [-3369.449] (-3358.582) (-3398.107) (-3367.233) * (-3366.278) [-3358.114] (-3359.004) (-3372.395) -- 0:12:14
284000 -- (-3364.981) (-3362.612) (-3378.020) [-3357.502] * (-3368.963) (-3354.786) (-3361.813) [-3371.212] -- 0:12:13
285000 -- (-3364.969) [-3367.213] (-3381.355) (-3366.864) * (-3358.411) [-3357.378] (-3378.339) (-3387.141) -- 0:12:12
Average standard deviation of split frequencies: 0.014062
286000 -- (-3364.037) [-3350.090] (-3364.175) (-3356.271) * (-3370.041) [-3360.192] (-3373.682) (-3384.911) -- 0:12:11
287000 -- (-3372.750) (-3370.611) [-3362.287] (-3369.714) * [-3362.516] (-3384.689) (-3369.106) (-3376.672) -- 0:12:10
288000 -- (-3374.484) (-3380.896) [-3365.672] (-3376.198) * [-3365.589] (-3364.774) (-3393.452) (-3369.957) -- 0:12:09
289000 -- (-3364.634) [-3355.259] (-3364.500) (-3394.284) * [-3355.763] (-3385.830) (-3363.521) (-3367.951) -- 0:12:08
290000 -- [-3366.107] (-3374.513) (-3366.977) (-3374.606) * (-3373.939) [-3364.927] (-3371.467) (-3370.669) -- 0:12:04
Average standard deviation of split frequencies: 0.014394
291000 -- (-3367.873) (-3370.206) [-3364.311] (-3382.709) * (-3374.518) [-3352.902] (-3375.964) (-3360.543) -- 0:12:03
292000 -- [-3369.052] (-3374.650) (-3370.374) (-3368.830) * (-3363.571) (-3364.099) (-3394.711) [-3355.153] -- 0:12:02
293000 -- (-3373.513) (-3387.037) [-3373.795] (-3365.839) * (-3391.522) (-3376.041) (-3378.510) [-3351.546] -- 0:12:01
294000 -- (-3362.954) (-3381.310) [-3369.016] (-3371.536) * (-3376.398) (-3378.221) (-3373.602) [-3353.514] -- 0:12:00
295000 -- [-3373.839] (-3387.370) (-3358.096) (-3379.225) * [-3365.965] (-3377.477) (-3371.729) (-3360.620) -- 0:11:59
Average standard deviation of split frequencies: 0.014283
296000 -- (-3380.127) (-3366.151) [-3354.930] (-3377.693) * (-3359.092) [-3364.087] (-3373.861) (-3373.218) -- 0:11:58
297000 -- [-3370.813] (-3379.847) (-3361.435) (-3365.041) * [-3363.812] (-3364.308) (-3370.759) (-3365.123) -- 0:11:57
298000 -- (-3385.772) (-3369.493) (-3361.365) [-3371.968] * (-3355.812) [-3369.222] (-3375.050) (-3390.905) -- 0:11:56
299000 -- (-3370.988) (-3358.465) [-3358.777] (-3361.332) * (-3367.621) (-3383.239) (-3376.735) [-3368.237] -- 0:11:55
300000 -- (-3375.303) (-3379.648) (-3360.061) [-3371.597] * (-3373.501) [-3373.611] (-3387.537) (-3378.959) -- 0:11:54
Average standard deviation of split frequencies: 0.013670
301000 -- (-3385.824) [-3362.221] (-3362.580) (-3372.972) * (-3359.580) [-3360.875] (-3378.139) (-3377.428) -- 0:11:50
302000 -- (-3381.192) [-3380.447] (-3359.491) (-3389.769) * (-3376.154) (-3373.952) [-3356.712] (-3380.202) -- 0:11:49
303000 -- (-3388.029) (-3374.136) [-3366.972] (-3391.672) * (-3368.579) (-3363.694) (-3385.111) [-3357.704] -- 0:11:48
304000 -- (-3376.269) (-3380.753) [-3368.522] (-3385.464) * (-3367.484) [-3367.875] (-3380.591) (-3368.509) -- 0:11:47
305000 -- (-3373.607) (-3370.196) [-3373.771] (-3384.322) * [-3361.230] (-3382.046) (-3378.156) (-3378.279) -- 0:11:46
Average standard deviation of split frequencies: 0.013720
306000 -- [-3367.600] (-3365.438) (-3387.947) (-3372.733) * (-3363.902) (-3383.149) [-3357.526] (-3366.589) -- 0:11:45
307000 -- (-3374.508) [-3372.439] (-3372.063) (-3383.959) * (-3368.175) (-3376.956) [-3357.121] (-3366.859) -- 0:11:44
308000 -- (-3367.801) (-3378.627) [-3382.517] (-3383.547) * (-3368.241) (-3387.272) [-3366.799] (-3376.449) -- 0:11:43
309000 -- (-3375.091) (-3378.784) [-3367.314] (-3365.160) * [-3369.171] (-3400.755) (-3370.494) (-3387.978) -- 0:11:42
310000 -- (-3373.982) (-3371.296) (-3381.521) [-3362.475] * (-3381.349) (-3376.072) [-3382.019] (-3365.238) -- 0:11:38
Average standard deviation of split frequencies: 0.012756
311000 -- (-3364.080) [-3375.891] (-3381.699) (-3372.248) * (-3387.863) (-3371.508) (-3376.427) [-3354.258] -- 0:11:37
312000 -- (-3371.558) [-3368.402] (-3369.870) (-3380.141) * [-3369.131] (-3375.202) (-3369.909) (-3385.735) -- 0:11:36
313000 -- (-3372.506) (-3381.270) [-3360.392] (-3375.375) * [-3365.723] (-3380.243) (-3366.860) (-3369.423) -- 0:11:35
314000 -- (-3367.905) (-3370.728) [-3365.576] (-3384.464) * (-3375.552) (-3366.828) (-3372.132) [-3376.489] -- 0:11:34
315000 -- [-3363.264] (-3380.563) (-3366.113) (-3375.421) * (-3377.055) (-3362.214) [-3360.380] (-3390.342) -- 0:11:33
Average standard deviation of split frequencies: 0.012121
316000 -- [-3368.199] (-3369.822) (-3356.593) (-3375.235) * (-3368.937) (-3375.625) [-3362.171] (-3395.859) -- 0:11:32
317000 -- (-3369.539) (-3393.997) [-3354.802] (-3370.873) * (-3380.582) (-3380.720) [-3362.709] (-3372.227) -- 0:11:31
318000 -- (-3377.748) (-3361.908) (-3376.680) [-3379.986] * (-3396.234) (-3379.932) [-3374.810] (-3369.643) -- 0:11:28
319000 -- (-3399.852) (-3360.964) (-3379.606) [-3360.190] * (-3387.794) [-3353.556] (-3376.029) (-3367.556) -- 0:11:27
320000 -- (-3394.893) (-3367.510) (-3371.319) [-3368.301] * (-3381.175) (-3367.059) (-3379.209) [-3365.986] -- 0:11:26
Average standard deviation of split frequencies: 0.012266
321000 -- [-3376.350] (-3374.787) (-3386.863) (-3375.055) * (-3401.162) (-3362.530) (-3399.158) [-3367.635] -- 0:11:25
322000 -- (-3373.287) [-3371.692] (-3367.146) (-3381.162) * (-3382.587) [-3360.466] (-3375.698) (-3375.169) -- 0:11:24
323000 -- [-3370.914] (-3365.147) (-3368.398) (-3367.423) * (-3387.609) [-3356.047] (-3367.406) (-3378.266) -- 0:11:23
324000 -- [-3363.967] (-3361.163) (-3387.120) (-3387.673) * (-3386.715) [-3360.558] (-3363.868) (-3385.109) -- 0:11:22
325000 -- [-3353.770] (-3369.814) (-3378.086) (-3367.907) * (-3367.403) (-3376.925) [-3365.698] (-3370.549) -- 0:11:21
Average standard deviation of split frequencies: 0.012020
326000 -- (-3369.769) (-3369.618) [-3371.540] (-3361.568) * (-3375.317) (-3374.566) [-3372.795] (-3378.418) -- 0:11:20
327000 -- (-3377.876) [-3367.712] (-3366.173) (-3376.317) * [-3357.190] (-3371.907) (-3361.848) (-3398.258) -- 0:11:17
328000 -- [-3380.552] (-3369.024) (-3376.675) (-3397.515) * [-3354.968] (-3374.178) (-3360.174) (-3375.938) -- 0:11:16
329000 -- (-3384.478) [-3358.790] (-3361.591) (-3376.660) * [-3363.869] (-3394.039) (-3369.562) (-3365.425) -- 0:11:15
330000 -- (-3374.507) [-3361.019] (-3375.146) (-3379.247) * (-3376.402) [-3373.790] (-3373.933) (-3371.806) -- 0:11:14
Average standard deviation of split frequencies: 0.012296
331000 -- (-3369.020) (-3374.865) [-3358.561] (-3371.971) * (-3375.389) [-3364.895] (-3377.646) (-3375.701) -- 0:11:13
332000 -- (-3358.841) (-3374.676) [-3375.209] (-3390.431) * (-3363.069) (-3373.219) (-3386.677) [-3373.881] -- 0:11:12
333000 -- [-3369.491] (-3381.568) (-3369.952) (-3390.031) * (-3364.374) (-3361.719) (-3373.333) [-3367.663] -- 0:11:11
334000 -- (-3363.775) (-3378.801) (-3370.092) [-3356.324] * (-3364.921) (-3368.716) [-3375.080] (-3372.706) -- 0:11:09
335000 -- (-3355.806) [-3372.272] (-3371.951) (-3380.825) * (-3376.361) (-3355.776) [-3373.058] (-3370.054) -- 0:11:08
Average standard deviation of split frequencies: 0.011925
336000 -- [-3365.102] (-3376.937) (-3374.970) (-3367.302) * (-3368.857) (-3360.039) (-3386.018) [-3359.540] -- 0:11:05
337000 -- (-3359.882) (-3388.821) [-3370.826] (-3371.884) * (-3395.255) (-3372.783) (-3377.508) [-3357.234] -- 0:11:04
338000 -- (-3379.260) (-3386.449) [-3368.194] (-3372.969) * (-3374.101) (-3375.191) [-3384.609] (-3375.957) -- 0:11:03
339000 -- (-3360.310) (-3377.727) [-3369.750] (-3363.161) * (-3380.391) (-3368.544) [-3374.298] (-3378.866) -- 0:11:02
340000 -- (-3365.877) (-3367.148) (-3372.262) [-3364.426] * (-3364.796) [-3366.309] (-3371.723) (-3359.490) -- 0:11:01
Average standard deviation of split frequencies: 0.011286
341000 -- [-3360.116] (-3371.103) (-3378.930) (-3385.336) * (-3369.971) (-3377.637) (-3365.999) [-3366.207] -- 0:11:00
342000 -- [-3355.941] (-3373.929) (-3360.406) (-3385.015) * (-3364.710) (-3370.075) [-3368.862] (-3365.083) -- 0:10:59
343000 -- (-3362.552) (-3385.819) (-3369.709) [-3375.954] * (-3361.008) (-3384.293) (-3374.441) [-3364.503] -- 0:10:58
344000 -- (-3373.222) (-3375.902) (-3375.729) [-3367.286] * [-3366.586] (-3375.484) (-3370.043) (-3379.026) -- 0:10:56
345000 -- (-3376.605) [-3361.452] (-3373.376) (-3372.331) * (-3358.517) (-3369.428) (-3382.940) [-3363.618] -- 0:10:55
Average standard deviation of split frequencies: 0.011198
346000 -- (-3374.780) (-3381.158) (-3376.551) [-3365.159] * [-3372.044] (-3371.153) (-3394.272) (-3380.403) -- 0:10:54
347000 -- [-3376.836] (-3367.218) (-3378.103) (-3352.600) * (-3377.652) [-3362.117] (-3395.455) (-3373.992) -- 0:10:53
348000 -- (-3382.581) (-3378.557) (-3382.303) [-3367.466] * (-3370.702) [-3365.286] (-3370.968) (-3373.295) -- 0:10:52
349000 -- (-3361.327) (-3378.210) (-3368.835) [-3354.533] * (-3390.061) (-3361.648) (-3373.594) [-3366.393] -- 0:10:51
350000 -- [-3362.386] (-3375.460) (-3378.715) (-3369.826) * (-3380.874) (-3382.747) [-3356.340] (-3380.963) -- 0:10:50
Average standard deviation of split frequencies: 0.010544
351000 -- (-3377.720) (-3374.762) [-3361.213] (-3374.536) * [-3370.598] (-3371.989) (-3362.225) (-3372.461) -- 0:10:49
352000 -- (-3386.820) (-3372.823) (-3377.509) [-3358.777] * (-3358.580) [-3360.658] (-3381.044) (-3366.742) -- 0:10:48
353000 -- (-3383.071) (-3367.758) (-3374.504) [-3366.429] * [-3364.256] (-3370.202) (-3368.580) (-3367.691) -- 0:10:45
354000 -- (-3377.906) (-3362.501) [-3358.504] (-3365.633) * (-3374.679) (-3380.536) (-3384.820) [-3362.792] -- 0:10:44
355000 -- (-3393.164) [-3359.046] (-3381.671) (-3368.375) * (-3364.175) (-3383.719) (-3365.021) [-3364.150] -- 0:10:43
Average standard deviation of split frequencies: 0.010718
356000 -- (-3373.193) [-3371.989] (-3384.295) (-3377.860) * [-3362.227] (-3370.881) (-3368.125) (-3369.323) -- 0:10:42
357000 -- [-3371.323] (-3363.057) (-3388.626) (-3367.374) * (-3364.664) [-3365.514] (-3366.405) (-3366.553) -- 0:10:41
358000 -- [-3364.350] (-3359.109) (-3370.012) (-3372.313) * (-3369.782) [-3374.806] (-3374.196) (-3386.565) -- 0:10:40
359000 -- (-3367.762) [-3371.207] (-3386.441) (-3356.607) * (-3375.729) (-3355.728) (-3374.255) [-3359.665] -- 0:10:39
360000 -- [-3357.882] (-3371.342) (-3379.831) (-3360.853) * [-3365.019] (-3367.065) (-3378.587) (-3369.387) -- 0:10:38
Average standard deviation of split frequencies: 0.011232
361000 -- (-3367.453) (-3368.617) (-3378.552) [-3374.425] * (-3375.204) (-3389.369) [-3364.234] (-3366.114) -- 0:10:35
362000 -- [-3360.869] (-3372.531) (-3388.240) (-3368.021) * (-3385.752) (-3362.711) (-3363.447) [-3362.549] -- 0:10:34
363000 -- [-3360.584] (-3367.775) (-3382.096) (-3379.953) * [-3370.762] (-3368.652) (-3374.578) (-3378.265) -- 0:10:33
364000 -- (-3361.204) (-3367.115) (-3376.709) [-3367.737] * (-3362.006) (-3375.905) [-3363.151] (-3368.534) -- 0:10:32
365000 -- [-3358.087] (-3376.894) (-3371.837) (-3367.970) * (-3359.684) (-3379.451) (-3385.540) [-3369.182] -- 0:10:31
Average standard deviation of split frequencies: 0.010948
366000 -- [-3365.013] (-3359.366) (-3381.134) (-3370.713) * [-3365.956] (-3370.365) (-3380.119) (-3382.793) -- 0:10:30
367000 -- (-3378.110) [-3374.063] (-3399.097) (-3373.604) * (-3370.805) [-3365.988] (-3365.754) (-3386.680) -- 0:10:29
368000 -- (-3388.936) [-3361.495] (-3379.384) (-3351.875) * (-3381.048) [-3363.480] (-3362.226) (-3370.882) -- 0:10:28
369000 -- (-3363.284) [-3353.281] (-3377.783) (-3372.937) * (-3362.787) (-3382.542) [-3369.444] (-3371.175) -- 0:10:27
370000 -- (-3375.596) (-3376.411) (-3377.536) [-3367.493] * (-3384.102) [-3364.579] (-3363.923) (-3366.780) -- 0:10:24
Average standard deviation of split frequencies: 0.010174
371000 -- [-3367.423] (-3379.817) (-3373.840) (-3365.469) * (-3371.472) (-3369.716) [-3364.397] (-3370.590) -- 0:10:23
372000 -- (-3378.360) (-3372.075) (-3372.011) [-3361.511] * (-3378.409) [-3357.837] (-3376.376) (-3365.271) -- 0:10:22
373000 -- (-3389.139) (-3368.313) [-3376.855] (-3369.663) * (-3387.904) (-3368.035) (-3365.237) [-3372.189] -- 0:10:21
374000 -- (-3386.955) [-3353.615] (-3375.277) (-3357.825) * (-3382.568) (-3370.026) [-3358.925] (-3373.052) -- 0:10:20
375000 -- (-3386.417) [-3361.153] (-3366.392) (-3360.573) * (-3390.648) (-3380.098) (-3364.184) [-3360.418] -- 0:10:20
Average standard deviation of split frequencies: 0.010304
376000 -- (-3399.123) [-3371.874] (-3361.879) (-3365.585) * (-3387.132) (-3359.799) (-3377.246) [-3360.818] -- 0:10:19
377000 -- (-3360.659) (-3373.000) [-3364.418] (-3372.697) * (-3367.994) (-3371.126) (-3374.891) [-3367.004] -- 0:10:16
378000 -- (-3361.270) (-3377.688) (-3384.255) [-3365.600] * (-3367.247) (-3366.946) (-3369.620) [-3367.106] -- 0:10:15
379000 -- [-3364.601] (-3372.511) (-3364.870) (-3379.787) * [-3357.390] (-3370.104) (-3360.225) (-3356.189) -- 0:10:14
380000 -- (-3390.577) (-3374.305) [-3360.404] (-3363.828) * (-3371.834) (-3370.494) [-3369.968] (-3367.463) -- 0:10:13
Average standard deviation of split frequencies: 0.010178
381000 -- (-3379.511) [-3356.986] (-3375.783) (-3365.437) * (-3369.230) [-3361.651] (-3358.968) (-3362.140) -- 0:10:12
382000 -- (-3378.998) (-3363.767) [-3370.417] (-3363.971) * (-3359.376) (-3364.502) (-3369.921) [-3363.186] -- 0:10:11
383000 -- (-3372.298) (-3363.671) [-3365.313] (-3395.184) * (-3376.045) [-3361.775] (-3369.266) (-3380.649) -- 0:10:10
384000 -- [-3367.214] (-3356.028) (-3370.719) (-3396.355) * (-3361.653) (-3390.845) (-3365.426) [-3361.646] -- 0:10:09
385000 -- (-3372.299) [-3369.708] (-3378.590) (-3387.016) * (-3373.181) (-3382.221) (-3381.001) [-3350.197] -- 0:10:07
Average standard deviation of split frequencies: 0.010140
386000 -- (-3367.140) (-3370.116) [-3357.634] (-3396.500) * (-3371.659) (-3377.648) [-3361.334] (-3368.566) -- 0:10:06
387000 -- (-3387.797) (-3363.826) (-3364.916) [-3369.489] * (-3383.894) (-3379.167) (-3377.818) [-3367.655] -- 0:10:05
388000 -- (-3379.661) (-3361.727) (-3391.382) [-3359.268] * [-3378.814] (-3383.621) (-3363.754) (-3385.278) -- 0:10:04
389000 -- (-3375.065) (-3370.661) (-3369.096) [-3362.785] * (-3369.098) (-3383.803) [-3360.249] (-3377.124) -- 0:10:03
390000 -- (-3371.766) [-3363.202] (-3386.631) (-3372.297) * (-3376.901) (-3373.571) [-3363.261] (-3368.133) -- 0:10:02
Average standard deviation of split frequencies: 0.011043
391000 -- (-3370.266) [-3361.265] (-3380.282) (-3386.700) * (-3368.240) (-3373.412) [-3362.526] (-3379.015) -- 0:10:01
392000 -- [-3367.852] (-3365.905) (-3385.194) (-3365.241) * (-3371.743) [-3354.681] (-3383.971) (-3362.523) -- 0:10:00
393000 -- [-3366.521] (-3352.186) (-3367.452) (-3384.275) * (-3371.465) [-3361.975] (-3377.540) (-3390.653) -- 0:09:57
394000 -- [-3364.808] (-3363.809) (-3370.181) (-3375.420) * [-3366.875] (-3356.496) (-3379.646) (-3379.635) -- 0:09:56
395000 -- (-3387.600) (-3367.676) [-3368.950] (-3377.851) * [-3365.241] (-3386.587) (-3381.307) (-3370.554) -- 0:09:55
Average standard deviation of split frequencies: 0.011940
396000 -- (-3386.431) (-3368.784) [-3380.710] (-3374.104) * (-3374.179) (-3365.279) [-3365.430] (-3362.880) -- 0:09:54
397000 -- (-3372.520) [-3362.571] (-3367.667) (-3373.989) * [-3363.576] (-3367.503) (-3376.053) (-3366.490) -- 0:09:53
398000 -- (-3386.958) [-3362.014] (-3368.948) (-3382.043) * (-3367.092) (-3365.002) [-3374.603] (-3362.451) -- 0:09:52
399000 -- (-3361.496) (-3370.195) (-3376.054) [-3371.351] * (-3380.204) (-3364.628) [-3356.719] (-3365.288) -- 0:09:51
400000 -- [-3371.272] (-3377.555) (-3395.342) (-3377.540) * (-3365.148) [-3361.587] (-3372.469) (-3358.417) -- 0:09:49
Average standard deviation of split frequencies: 0.011944
401000 -- (-3379.647) [-3361.512] (-3374.465) (-3375.683) * (-3380.275) [-3353.935] (-3372.963) (-3375.900) -- 0:09:48
402000 -- (-3372.084) [-3361.311] (-3389.081) (-3373.997) * (-3375.307) [-3357.665] (-3374.421) (-3378.283) -- 0:09:47
403000 -- [-3357.128] (-3379.000) (-3388.829) (-3386.101) * (-3368.098) (-3362.684) [-3367.896] (-3367.829) -- 0:09:46
404000 -- (-3362.135) (-3373.458) (-3375.974) [-3367.509] * [-3366.708] (-3376.078) (-3392.642) (-3371.262) -- 0:09:45
405000 -- (-3370.922) (-3372.550) (-3370.981) [-3363.171] * [-3368.670] (-3372.031) (-3370.844) (-3361.203) -- 0:09:44
Average standard deviation of split frequencies: 0.011541
406000 -- (-3370.293) (-3375.185) (-3379.809) [-3359.626] * [-3364.624] (-3390.663) (-3381.036) (-3371.604) -- 0:09:43
407000 -- (-3385.719) (-3379.825) [-3366.766] (-3374.620) * (-3379.747) (-3385.336) (-3367.272) [-3364.242] -- 0:09:42
408000 -- [-3365.431] (-3376.290) (-3373.009) (-3368.936) * (-3387.159) (-3371.696) (-3365.618) [-3353.488] -- 0:09:41
409000 -- (-3364.730) (-3392.572) [-3365.017] (-3376.006) * (-3407.594) (-3378.463) [-3371.974] (-3364.923) -- 0:09:40
410000 -- [-3367.577] (-3382.092) (-3363.062) (-3379.458) * [-3367.335] (-3386.331) (-3383.231) (-3362.247) -- 0:09:41
Average standard deviation of split frequencies: 0.011375
411000 -- (-3385.091) (-3385.098) [-3384.517] (-3385.752) * [-3362.182] (-3380.298) (-3360.024) (-3367.433) -- 0:09:40
412000 -- (-3378.823) [-3365.088] (-3394.706) (-3365.873) * (-3365.861) (-3375.151) (-3369.296) [-3363.765] -- 0:09:39
413000 -- (-3385.189) (-3373.107) (-3381.504) [-3361.297] * (-3371.061) (-3378.231) (-3374.483) [-3367.287] -- 0:09:39
414000 -- (-3377.110) [-3369.636] (-3372.890) (-3371.024) * (-3367.988) (-3371.668) [-3363.806] (-3365.257) -- 0:09:38
415000 -- [-3375.704] (-3379.343) (-3378.041) (-3367.643) * [-3352.821] (-3369.268) (-3374.230) (-3390.248) -- 0:09:37
Average standard deviation of split frequencies: 0.011572
416000 -- [-3367.563] (-3369.608) (-3372.507) (-3385.225) * (-3372.630) [-3361.581] (-3378.927) (-3375.577) -- 0:09:36
417000 -- [-3353.663] (-3386.445) (-3361.120) (-3376.809) * (-3384.313) (-3373.180) [-3361.751] (-3362.510) -- 0:09:36
418000 -- (-3357.228) (-3379.894) (-3381.968) [-3357.193] * (-3378.099) (-3367.620) [-3368.411] (-3382.870) -- 0:09:35
419000 -- [-3367.042] (-3366.456) (-3380.382) (-3357.011) * [-3370.205] (-3375.972) (-3380.812) (-3371.693) -- 0:09:34
420000 -- (-3373.630) (-3372.733) [-3375.345] (-3372.092) * (-3374.908) (-3371.179) (-3382.186) [-3364.976] -- 0:09:33
Average standard deviation of split frequencies: 0.011783
421000 -- (-3372.693) (-3380.542) (-3384.621) [-3364.672] * (-3371.297) (-3375.754) (-3379.594) [-3349.153] -- 0:09:32
422000 -- (-3371.062) (-3389.629) (-3384.357) [-3357.795] * [-3364.222] (-3389.599) (-3376.732) (-3370.847) -- 0:09:31
423000 -- (-3372.393) (-3374.964) [-3369.635] (-3370.804) * (-3364.482) (-3366.423) (-3367.720) [-3366.385] -- 0:09:30
424000 -- (-3388.078) (-3365.826) [-3367.033] (-3383.974) * [-3363.784] (-3373.557) (-3366.908) (-3366.226) -- 0:09:27
425000 -- (-3368.680) (-3366.842) (-3394.735) [-3376.610] * [-3366.963] (-3363.702) (-3377.112) (-3373.027) -- 0:09:26
Average standard deviation of split frequencies: 0.010731
426000 -- [-3366.788] (-3361.207) (-3380.448) (-3369.751) * [-3369.620] (-3384.441) (-3366.493) (-3375.841) -- 0:09:25
427000 -- (-3369.593) [-3358.352] (-3386.212) (-3380.326) * (-3358.948) (-3362.937) [-3360.305] (-3377.228) -- 0:09:24
428000 -- [-3373.316] (-3359.971) (-3387.320) (-3379.104) * (-3369.743) (-3367.445) [-3353.170] (-3368.680) -- 0:09:23
429000 -- (-3352.274) (-3378.887) [-3383.138] (-3370.919) * (-3366.059) (-3390.440) (-3368.792) [-3368.739] -- 0:09:23
430000 -- (-3378.136) [-3355.957] (-3387.376) (-3369.219) * (-3371.244) (-3383.037) [-3366.483] (-3361.843) -- 0:09:22
Average standard deviation of split frequencies: 0.010880
431000 -- (-3387.157) (-3378.650) [-3365.290] (-3370.183) * [-3366.295] (-3383.804) (-3378.881) (-3361.256) -- 0:09:21
432000 -- (-3382.502) (-3375.104) (-3369.219) [-3355.566] * (-3370.221) [-3372.245] (-3362.273) (-3365.252) -- 0:09:18
433000 -- (-3376.697) (-3375.813) (-3384.252) [-3360.824] * (-3376.453) (-3367.448) (-3368.121) [-3356.483] -- 0:09:17
434000 -- (-3368.836) (-3385.356) [-3367.749] (-3363.089) * (-3377.406) (-3381.161) [-3359.153] (-3361.898) -- 0:09:16
435000 -- (-3368.997) (-3368.064) (-3369.059) [-3363.803] * (-3381.655) (-3372.392) (-3360.725) [-3369.782] -- 0:09:15
Average standard deviation of split frequencies: 0.010484
436000 -- [-3360.990] (-3373.095) (-3390.270) (-3362.033) * (-3370.815) (-3365.528) [-3362.308] (-3364.934) -- 0:09:14
437000 -- [-3369.624] (-3373.274) (-3372.414) (-3393.919) * (-3377.422) [-3361.829] (-3359.203) (-3362.853) -- 0:09:13
438000 -- (-3369.640) (-3379.196) (-3374.167) [-3371.571] * (-3369.060) [-3364.574] (-3368.137) (-3370.183) -- 0:09:13
439000 -- (-3375.795) [-3364.036] (-3367.288) (-3376.667) * (-3373.680) (-3369.071) [-3369.424] (-3365.805) -- 0:09:12
440000 -- (-3370.525) (-3372.680) [-3356.201] (-3382.871) * (-3379.292) [-3361.369] (-3361.172) (-3370.292) -- 0:09:11
Average standard deviation of split frequencies: 0.010341
441000 -- (-3383.329) (-3380.398) [-3368.260] (-3382.485) * (-3368.610) [-3363.547] (-3378.653) (-3365.182) -- 0:09:10
442000 -- (-3362.900) (-3384.358) (-3370.286) [-3357.520] * (-3375.604) [-3363.990] (-3378.154) (-3367.479) -- 0:09:07
443000 -- (-3364.302) (-3374.430) (-3370.318) [-3365.867] * (-3380.892) (-3364.658) (-3381.358) [-3361.242] -- 0:09:06
444000 -- (-3398.786) (-3386.654) (-3369.829) [-3355.252] * [-3369.688] (-3364.487) (-3365.389) (-3378.980) -- 0:09:05
445000 -- (-3379.080) (-3373.750) (-3359.492) [-3368.726] * [-3350.504] (-3375.895) (-3375.511) (-3379.357) -- 0:09:05
Average standard deviation of split frequencies: 0.010313
446000 -- (-3387.153) (-3367.752) [-3383.107] (-3370.051) * [-3368.256] (-3371.158) (-3372.059) (-3372.307) -- 0:09:04
447000 -- (-3362.977) (-3367.227) (-3387.070) [-3365.394] * [-3365.276] (-3363.561) (-3386.600) (-3360.639) -- 0:09:03
448000 -- (-3372.408) (-3365.048) (-3376.921) [-3362.825] * (-3373.055) (-3366.053) (-3381.714) [-3361.134] -- 0:09:02
449000 -- [-3362.474] (-3364.760) (-3370.168) (-3366.289) * [-3373.530] (-3369.343) (-3378.061) (-3362.590) -- 0:09:01
450000 -- [-3360.347] (-3374.486) (-3356.778) (-3372.276) * (-3377.363) (-3372.283) (-3377.529) [-3358.325] -- 0:09:00
Average standard deviation of split frequencies: 0.009985
451000 -- (-3372.501) (-3368.394) [-3359.750] (-3376.031) * (-3381.653) (-3379.235) (-3362.650) [-3351.289] -- 0:08:58
452000 -- (-3366.884) (-3371.150) [-3357.782] (-3370.139) * (-3356.945) (-3376.358) (-3374.459) [-3358.120] -- 0:08:57
453000 -- (-3365.715) (-3372.578) (-3379.259) [-3360.938] * [-3355.927] (-3370.336) (-3375.379) (-3372.741) -- 0:08:56
454000 -- (-3370.705) (-3374.053) (-3368.969) [-3367.655] * [-3354.110] (-3382.528) (-3360.221) (-3373.569) -- 0:08:55
455000 -- (-3370.227) (-3383.080) [-3364.644] (-3376.398) * (-3357.436) (-3390.763) (-3370.691) [-3378.371] -- 0:08:54
Average standard deviation of split frequencies: 0.009993
456000 -- (-3372.546) [-3353.470] (-3363.169) (-3383.356) * (-3361.068) (-3396.656) (-3372.804) [-3362.239] -- 0:08:53
457000 -- (-3382.085) (-3369.171) (-3363.697) [-3364.023] * (-3369.325) (-3383.223) [-3369.004] (-3383.490) -- 0:08:52
458000 -- (-3393.013) (-3372.007) [-3358.460] (-3374.825) * (-3362.276) (-3376.190) (-3366.438) [-3361.843] -- 0:08:51
459000 -- (-3374.063) (-3384.976) [-3352.197] (-3385.073) * (-3358.274) (-3385.901) (-3368.683) [-3361.674] -- 0:08:50
460000 -- (-3368.904) [-3371.216] (-3365.830) (-3375.278) * (-3370.501) [-3361.774] (-3359.555) (-3366.560) -- 0:08:48
Average standard deviation of split frequencies: 0.010202
461000 -- [-3374.886] (-3385.341) (-3362.404) (-3366.322) * [-3362.988] (-3400.748) (-3373.207) (-3361.207) -- 0:08:47
462000 -- (-3376.914) [-3361.091] (-3360.235) (-3369.486) * (-3379.745) (-3364.531) (-3382.525) [-3360.655] -- 0:08:46
463000 -- (-3360.158) (-3372.034) [-3370.239] (-3380.752) * (-3367.457) (-3375.277) (-3368.954) [-3359.500] -- 0:08:45
464000 -- [-3357.689] (-3362.978) (-3391.364) (-3368.787) * (-3383.472) [-3369.313] (-3377.620) (-3364.956) -- 0:08:44
465000 -- (-3368.202) [-3354.083] (-3385.107) (-3378.097) * [-3362.570] (-3359.540) (-3373.790) (-3373.638) -- 0:08:43
Average standard deviation of split frequencies: 0.009932
466000 -- (-3366.309) [-3356.060] (-3375.109) (-3393.874) * [-3358.418] (-3367.126) (-3362.680) (-3362.018) -- 0:08:42
467000 -- (-3380.452) [-3348.937] (-3367.704) (-3368.559) * (-3371.895) [-3353.659] (-3370.519) (-3365.625) -- 0:08:41
468000 -- [-3351.002] (-3371.073) (-3367.435) (-3368.056) * (-3383.510) (-3370.239) [-3379.769] (-3373.152) -- 0:08:40
469000 -- [-3359.669] (-3377.264) (-3371.134) (-3362.833) * (-3374.994) (-3375.586) [-3352.445] (-3363.415) -- 0:08:38
470000 -- [-3356.411] (-3370.601) (-3370.354) (-3371.382) * (-3386.900) (-3384.491) (-3359.463) [-3363.514] -- 0:08:37
Average standard deviation of split frequencies: 0.010350
471000 -- (-3363.412) [-3361.106] (-3376.146) (-3375.124) * (-3383.169) (-3407.878) [-3359.025] (-3374.834) -- 0:08:36
472000 -- [-3353.630] (-3360.443) (-3376.080) (-3387.227) * (-3378.586) (-3371.224) [-3364.798] (-3355.603) -- 0:08:35
473000 -- [-3360.007] (-3369.248) (-3369.387) (-3373.870) * (-3383.142) (-3399.747) (-3374.915) [-3356.774] -- 0:08:35
474000 -- (-3364.191) (-3385.526) [-3362.967] (-3373.148) * [-3366.734] (-3396.769) (-3370.048) (-3376.019) -- 0:08:34
475000 -- (-3367.076) [-3370.877] (-3364.619) (-3357.089) * (-3364.534) [-3369.388] (-3374.866) (-3376.864) -- 0:08:33
Average standard deviation of split frequencies: 0.010894
476000 -- [-3364.346] (-3380.673) (-3377.005) (-3370.852) * (-3372.269) (-3382.167) (-3362.773) [-3379.379] -- 0:08:34
477000 -- (-3371.507) (-3363.926) [-3364.517] (-3360.343) * [-3368.040] (-3365.543) (-3374.817) (-3380.311) -- 0:08:33
478000 -- (-3367.118) (-3359.710) [-3364.961] (-3360.954) * (-3359.978) [-3363.301] (-3360.851) (-3386.315) -- 0:08:32
479000 -- (-3370.836) [-3359.885] (-3377.693) (-3375.646) * (-3376.308) (-3374.989) (-3372.940) [-3371.892] -- 0:08:32
480000 -- (-3368.271) (-3363.348) (-3387.992) [-3350.717] * (-3388.788) (-3357.004) (-3361.751) [-3366.720] -- 0:08:31
Average standard deviation of split frequencies: 0.010665
481000 -- (-3381.316) (-3368.045) (-3383.657) [-3354.171] * [-3368.164] (-3361.039) (-3369.431) (-3367.475) -- 0:08:30
482000 -- (-3362.138) (-3381.431) (-3379.755) [-3362.285] * (-3390.696) (-3364.290) [-3355.193] (-3380.185) -- 0:08:30
483000 -- (-3369.700) [-3366.844] (-3383.400) (-3363.749) * [-3383.855] (-3373.753) (-3360.719) (-3384.282) -- 0:08:29
484000 -- (-3370.392) (-3380.800) [-3371.157] (-3361.505) * (-3380.880) (-3362.528) (-3358.038) [-3373.434] -- 0:08:28
485000 -- (-3372.757) (-3377.456) [-3364.171] (-3365.562) * (-3364.899) (-3375.555) [-3366.440] (-3378.069) -- 0:08:27
Average standard deviation of split frequencies: 0.010288
486000 -- (-3369.184) (-3379.264) [-3362.497] (-3369.169) * (-3365.848) [-3363.150] (-3372.055) (-3380.561) -- 0:08:27
487000 -- (-3378.035) (-3382.227) (-3385.130) [-3365.887] * (-3359.667) (-3381.518) [-3373.816] (-3384.842) -- 0:08:26
488000 -- [-3354.645] (-3376.086) (-3371.041) (-3364.215) * [-3365.465] (-3371.365) (-3371.263) (-3378.936) -- 0:08:25
489000 -- [-3367.387] (-3391.083) (-3362.200) (-3371.043) * (-3376.960) [-3356.521] (-3376.095) (-3377.699) -- 0:08:25
490000 -- [-3360.313] (-3398.253) (-3380.805) (-3377.317) * (-3370.754) (-3381.967) [-3360.262] (-3377.358) -- 0:08:24
Average standard deviation of split frequencies: 0.010364
491000 -- [-3367.494] (-3386.243) (-3370.062) (-3372.664) * (-3380.105) (-3361.961) [-3366.809] (-3390.862) -- 0:08:23
492000 -- (-3366.745) (-3384.041) [-3368.272] (-3382.256) * (-3363.868) (-3371.027) [-3366.002] (-3378.819) -- 0:08:23
493000 -- [-3369.671] (-3372.646) (-3388.965) (-3377.767) * [-3366.933] (-3373.448) (-3367.187) (-3374.365) -- 0:08:22
494000 -- (-3378.798) (-3377.056) [-3369.001] (-3382.067) * (-3380.517) (-3368.941) [-3366.717] (-3365.484) -- 0:08:21
495000 -- (-3378.213) (-3370.458) (-3377.592) [-3368.062] * (-3364.524) [-3369.343] (-3362.729) (-3378.583) -- 0:08:21
Average standard deviation of split frequencies: 0.010959
496000 -- (-3360.725) [-3363.400] (-3365.059) (-3381.175) * (-3377.917) (-3372.722) [-3367.796] (-3379.770) -- 0:08:20
497000 -- [-3355.949] (-3377.043) (-3370.517) (-3362.601) * (-3364.878) [-3356.422] (-3374.318) (-3361.855) -- 0:08:19
498000 -- (-3370.919) (-3384.892) (-3361.744) [-3364.844] * (-3368.049) [-3353.804] (-3367.194) (-3375.873) -- 0:08:18
499000 -- (-3367.883) (-3390.115) [-3356.927] (-3368.136) * [-3364.820] (-3360.961) (-3381.940) (-3387.237) -- 0:08:18
500000 -- (-3361.731) [-3380.850] (-3375.742) (-3384.955) * (-3379.006) [-3373.073] (-3381.851) (-3370.318) -- 0:08:17
Average standard deviation of split frequencies: 0.010445
501000 -- [-3376.840] (-3379.192) (-3372.141) (-3377.476) * (-3383.154) [-3365.806] (-3369.712) (-3382.603) -- 0:08:17
502000 -- (-3378.651) (-3376.291) (-3377.882) [-3370.791] * (-3377.274) [-3361.156] (-3376.170) (-3384.007) -- 0:08:17
503000 -- [-3371.851] (-3365.752) (-3380.876) (-3375.145) * (-3366.755) [-3364.688] (-3363.107) (-3386.695) -- 0:08:16
504000 -- (-3361.535) [-3368.206] (-3382.226) (-3376.790) * (-3382.409) (-3379.846) [-3363.646] (-3386.495) -- 0:08:15
505000 -- [-3369.805] (-3380.736) (-3373.768) (-3382.963) * [-3370.312] (-3389.405) (-3378.561) (-3378.014) -- 0:08:15
Average standard deviation of split frequencies: 0.009768
506000 -- (-3367.318) [-3362.422] (-3374.721) (-3359.954) * (-3378.457) (-3372.635) (-3372.285) [-3358.873] -- 0:08:14
507000 -- (-3383.729) (-3375.178) (-3364.870) [-3384.934] * [-3362.464] (-3382.935) (-3388.653) (-3380.239) -- 0:08:13
508000 -- (-3381.603) (-3378.683) [-3369.076] (-3385.377) * [-3360.891] (-3382.718) (-3384.271) (-3371.396) -- 0:08:12
509000 -- (-3383.376) [-3368.174] (-3375.423) (-3409.499) * (-3368.416) (-3383.021) [-3371.514] (-3379.633) -- 0:08:11
510000 -- (-3369.604) [-3367.390] (-3397.783) (-3379.355) * [-3368.982] (-3362.666) (-3365.995) (-3383.572) -- 0:08:10
Average standard deviation of split frequencies: 0.009511
511000 -- (-3366.895) (-3358.679) [-3369.704] (-3398.604) * (-3384.765) (-3366.195) [-3363.161] (-3373.313) -- 0:08:09
512000 -- (-3377.786) (-3376.877) [-3356.881] (-3377.680) * (-3365.661) (-3368.489) (-3379.363) [-3358.898] -- 0:08:09
513000 -- (-3377.561) [-3377.113] (-3367.021) (-3385.709) * (-3380.169) (-3382.797) (-3383.799) [-3359.260] -- 0:08:08
514000 -- (-3380.435) (-3390.282) [-3361.352] (-3384.794) * [-3365.949] (-3366.596) (-3376.138) (-3371.846) -- 0:08:07
515000 -- (-3377.968) (-3384.327) [-3359.809] (-3377.696) * (-3369.638) [-3367.724] (-3396.382) (-3374.618) -- 0:08:07
Average standard deviation of split frequencies: 0.009689
516000 -- (-3380.325) (-3371.156) [-3360.572] (-3378.255) * (-3386.674) (-3356.050) (-3375.636) [-3368.932] -- 0:08:06
517000 -- (-3387.133) [-3372.882] (-3368.833) (-3368.821) * [-3371.744] (-3365.774) (-3379.870) (-3373.977) -- 0:08:05
518000 -- (-3383.547) [-3369.330] (-3362.007) (-3367.729) * [-3363.351] (-3374.183) (-3379.527) (-3378.957) -- 0:08:05
519000 -- (-3383.075) [-3369.704] (-3370.190) (-3375.767) * [-3376.911] (-3366.018) (-3372.678) (-3384.977) -- 0:08:04
520000 -- (-3381.561) (-3365.493) [-3357.319] (-3379.204) * (-3372.910) (-3368.459) [-3362.604] (-3384.340) -- 0:08:03
Average standard deviation of split frequencies: 0.009465
521000 -- (-3377.521) [-3365.614] (-3362.500) (-3377.288) * (-3363.184) (-3368.837) (-3374.517) [-3362.731] -- 0:08:03
522000 -- (-3386.525) [-3368.505] (-3373.881) (-3369.436) * [-3368.085] (-3375.127) (-3373.693) (-3373.140) -- 0:08:02
523000 -- (-3380.994) [-3378.359] (-3370.231) (-3360.042) * (-3381.244) (-3372.384) [-3360.932] (-3373.944) -- 0:08:01
524000 -- (-3378.048) (-3370.420) [-3360.641] (-3369.716) * (-3377.509) (-3375.256) [-3354.690] (-3383.537) -- 0:08:01
525000 -- [-3364.260] (-3378.248) (-3376.995) (-3376.522) * (-3373.901) (-3364.036) [-3364.691] (-3375.560) -- 0:08:00
Average standard deviation of split frequencies: 0.009560
526000 -- (-3378.375) (-3370.628) [-3361.776] (-3400.767) * (-3368.262) (-3370.031) [-3367.081] (-3380.946) -- 0:07:59
527000 -- (-3372.482) [-3360.558] (-3383.917) (-3379.462) * (-3364.662) [-3378.577] (-3381.637) (-3381.323) -- 0:07:59
528000 -- (-3371.840) (-3370.155) (-3374.679) [-3361.102] * (-3384.618) [-3369.006] (-3379.228) (-3363.455) -- 0:07:58
529000 -- (-3379.627) (-3371.805) [-3358.444] (-3393.365) * (-3363.741) [-3364.654] (-3388.776) (-3376.566) -- 0:07:57
530000 -- (-3377.661) (-3363.038) [-3372.029] (-3399.635) * (-3380.046) (-3377.351) [-3362.055] (-3372.057) -- 0:07:57
Average standard deviation of split frequencies: 0.009637
531000 -- (-3387.211) [-3364.832] (-3363.166) (-3378.458) * [-3367.625] (-3375.246) (-3368.305) (-3383.511) -- 0:07:56
532000 -- (-3377.027) (-3366.259) [-3372.381] (-3396.262) * (-3365.478) (-3368.322) [-3361.056] (-3384.077) -- 0:07:55
533000 -- (-3371.619) (-3363.416) [-3366.320] (-3394.389) * (-3373.854) [-3363.309] (-3369.701) (-3378.193) -- 0:07:54
534000 -- (-3374.694) (-3373.827) (-3365.798) [-3363.861] * [-3356.936] (-3362.442) (-3385.107) (-3367.325) -- 0:07:53
535000 -- (-3375.533) (-3363.989) [-3367.167] (-3362.634) * (-3372.856) [-3366.793] (-3369.314) (-3374.683) -- 0:07:52
Average standard deviation of split frequencies: 0.009701
536000 -- (-3372.287) (-3367.527) (-3381.252) [-3362.637] * [-3369.019] (-3381.231) (-3372.800) (-3379.238) -- 0:07:52
537000 -- (-3372.873) [-3367.732] (-3374.732) (-3379.223) * (-3369.109) (-3390.056) (-3367.624) [-3372.925] -- 0:07:51
538000 -- (-3380.984) (-3385.395) [-3365.482] (-3374.943) * (-3373.685) (-3379.556) [-3353.973] (-3376.019) -- 0:07:50
539000 -- (-3383.704) (-3371.158) [-3355.987] (-3396.689) * (-3377.779) (-3367.888) [-3370.769] (-3384.200) -- 0:07:50
540000 -- (-3371.164) (-3373.435) (-3366.310) [-3370.244] * (-3375.212) (-3381.345) (-3367.605) [-3363.764] -- 0:07:49
Average standard deviation of split frequencies: 0.009168
541000 -- (-3365.949) [-3360.423] (-3363.493) (-3382.420) * (-3375.976) (-3356.618) (-3367.557) [-3367.379] -- 0:07:48
542000 -- (-3359.218) [-3365.469] (-3373.913) (-3375.760) * [-3375.530] (-3373.670) (-3363.904) (-3375.340) -- 0:07:48
543000 -- (-3369.699) [-3363.190] (-3367.138) (-3373.699) * [-3362.759] (-3375.611) (-3373.051) (-3381.392) -- 0:07:47
544000 -- [-3366.393] (-3368.157) (-3360.690) (-3377.985) * [-3355.256] (-3375.361) (-3358.716) (-3380.654) -- 0:07:46
545000 -- (-3377.067) (-3361.539) (-3362.841) [-3366.407] * [-3364.736] (-3381.519) (-3366.277) (-3372.863) -- 0:07:45
Average standard deviation of split frequencies: 0.009759
546000 -- (-3368.683) [-3365.550] (-3382.680) (-3381.018) * (-3366.340) (-3387.596) [-3361.588] (-3363.843) -- 0:07:44
547000 -- (-3373.972) (-3383.235) [-3366.767] (-3371.380) * (-3370.500) (-3367.109) [-3367.194] (-3370.613) -- 0:07:43
548000 -- (-3379.183) [-3376.577] (-3391.791) (-3360.567) * [-3364.609] (-3368.956) (-3361.002) (-3375.590) -- 0:07:42
549000 -- (-3371.760) (-3371.564) (-3375.298) [-3372.238] * [-3358.166] (-3368.982) (-3358.945) (-3387.303) -- 0:07:42
550000 -- (-3381.404) [-3354.305] (-3379.045) (-3371.728) * (-3374.149) (-3379.302) [-3370.353] (-3384.509) -- 0:07:41
Average standard deviation of split frequencies: 0.009209
551000 -- (-3375.947) [-3369.246] (-3383.093) (-3392.853) * [-3361.246] (-3385.097) (-3363.767) (-3368.985) -- 0:07:40
552000 -- (-3381.793) (-3379.812) [-3359.420] (-3364.586) * [-3363.447] (-3375.737) (-3380.468) (-3377.989) -- 0:07:40
553000 -- [-3369.916] (-3373.098) (-3370.731) (-3372.580) * (-3376.016) [-3358.127] (-3379.860) (-3379.275) -- 0:07:39
554000 -- (-3367.563) (-3381.554) (-3366.256) [-3358.889] * [-3374.317] (-3363.424) (-3392.567) (-3358.665) -- 0:07:38
555000 -- (-3378.536) [-3363.728] (-3389.201) (-3363.343) * (-3381.412) (-3366.520) [-3365.892] (-3369.190) -- 0:07:37
Average standard deviation of split frequencies: 0.009326
556000 -- (-3370.463) [-3364.890] (-3362.921) (-3381.242) * (-3371.696) [-3362.260] (-3367.343) (-3380.479) -- 0:07:36
557000 -- (-3372.468) [-3360.654] (-3372.439) (-3374.449) * (-3388.835) (-3362.776) (-3366.575) [-3365.831] -- 0:07:35
558000 -- (-3368.076) (-3371.371) [-3366.775] (-3373.326) * [-3368.150] (-3381.693) (-3368.886) (-3362.847) -- 0:07:35
559000 -- (-3357.965) (-3385.229) (-3385.428) [-3361.015] * (-3377.088) (-3378.659) (-3366.060) [-3365.301] -- 0:07:34
560000 -- (-3369.492) (-3382.761) [-3370.025] (-3362.136) * (-3377.979) (-3371.067) [-3354.017] (-3370.336) -- 0:07:33
Average standard deviation of split frequencies: 0.009172
561000 -- (-3394.908) (-3378.060) (-3391.533) [-3368.534] * (-3364.272) [-3364.570] (-3351.520) (-3376.177) -- 0:07:33
562000 -- (-3370.718) (-3372.523) [-3367.553] (-3371.162) * (-3360.865) [-3358.510] (-3362.656) (-3367.377) -- 0:07:32
563000 -- (-3365.015) (-3384.023) (-3371.349) [-3351.801] * (-3365.859) (-3363.394) [-3370.384] (-3400.056) -- 0:07:30
564000 -- [-3367.919] (-3367.621) (-3378.044) (-3373.027) * (-3357.258) (-3378.473) [-3362.849] (-3370.375) -- 0:07:30
565000 -- [-3364.243] (-3378.299) (-3373.062) (-3366.434) * [-3365.657] (-3374.406) (-3366.538) (-3384.340) -- 0:07:29
Average standard deviation of split frequencies: 0.008707
566000 -- (-3363.767) (-3370.110) [-3366.899] (-3386.211) * (-3368.831) (-3377.980) [-3358.406] (-3375.085) -- 0:07:28
567000 -- [-3363.272] (-3364.100) (-3379.950) (-3368.022) * (-3378.132) [-3366.838] (-3355.338) (-3393.793) -- 0:07:27
568000 -- (-3375.009) (-3378.264) [-3366.545] (-3365.426) * (-3383.554) (-3379.633) (-3373.118) [-3363.009] -- 0:07:27
569000 -- (-3380.642) (-3370.756) [-3370.211] (-3372.661) * (-3363.864) [-3367.963] (-3378.748) (-3373.298) -- 0:07:26
570000 -- [-3367.950] (-3362.451) (-3363.250) (-3379.269) * (-3378.438) (-3358.331) (-3366.383) [-3365.529] -- 0:07:25
Average standard deviation of split frequencies: 0.008661
571000 -- (-3391.805) (-3376.480) [-3352.326] (-3380.160) * (-3379.777) [-3352.004] (-3366.125) (-3377.174) -- 0:07:24
572000 -- (-3376.343) (-3368.843) [-3366.868] (-3384.890) * (-3386.512) (-3369.930) (-3369.174) [-3364.966] -- 0:07:23
573000 -- (-3373.138) (-3373.235) (-3386.140) [-3365.512] * (-3378.342) [-3372.353] (-3393.976) (-3375.553) -- 0:07:22
574000 -- (-3372.059) (-3369.913) [-3366.365] (-3377.039) * [-3371.316] (-3366.541) (-3387.202) (-3379.489) -- 0:07:21
575000 -- (-3374.541) [-3368.700] (-3370.786) (-3404.015) * (-3389.656) [-3364.597] (-3389.527) (-3364.536) -- 0:07:21
Average standard deviation of split frequencies: 0.008135
576000 -- [-3361.968] (-3380.879) (-3391.041) (-3377.589) * (-3378.335) [-3362.458] (-3386.648) (-3371.539) -- 0:07:20
577000 -- (-3382.363) (-3385.540) (-3374.277) [-3366.964] * (-3375.873) (-3367.554) (-3384.465) [-3359.951] -- 0:07:19
578000 -- [-3361.213] (-3374.473) (-3375.258) (-3367.759) * (-3375.906) [-3362.797] (-3376.831) (-3359.905) -- 0:07:18
579000 -- (-3378.324) (-3375.070) [-3367.187] (-3369.492) * (-3381.140) (-3378.764) (-3373.974) [-3368.266] -- 0:07:17
580000 -- (-3363.506) [-3373.546] (-3365.755) (-3354.818) * [-3367.210] (-3369.621) (-3372.795) (-3388.118) -- 0:07:16
Average standard deviation of split frequencies: 0.008537
581000 -- (-3369.192) (-3386.933) [-3364.004] (-3378.957) * [-3374.517] (-3360.681) (-3382.689) (-3374.969) -- 0:07:16
582000 -- [-3363.439] (-3379.123) (-3373.805) (-3413.426) * (-3371.156) [-3363.312] (-3382.276) (-3371.939) -- 0:07:15
583000 -- (-3370.288) (-3373.233) (-3373.051) [-3371.148] * (-3376.558) (-3369.573) (-3370.480) [-3370.596] -- 0:07:14
584000 -- (-3378.369) (-3391.313) [-3368.039] (-3369.945) * (-3385.435) [-3354.059] (-3371.479) (-3371.726) -- 0:07:13
585000 -- (-3366.635) [-3368.435] (-3368.610) (-3380.197) * (-3370.520) (-3371.872) (-3387.447) [-3368.124] -- 0:07:12
Average standard deviation of split frequencies: 0.008044
586000 -- (-3381.973) (-3372.790) [-3366.387] (-3370.019) * (-3368.982) [-3364.664] (-3375.499) (-3373.530) -- 0:07:11
587000 -- [-3373.525] (-3355.161) (-3374.673) (-3380.750) * (-3378.135) (-3370.845) [-3364.012] (-3386.696) -- 0:07:10
588000 -- (-3375.262) [-3358.344] (-3363.057) (-3381.996) * [-3368.587] (-3390.879) (-3364.307) (-3384.851) -- 0:07:10
589000 -- [-3376.476] (-3359.525) (-3365.595) (-3381.861) * (-3375.640) (-3391.495) (-3382.646) [-3376.871] -- 0:07:09
590000 -- (-3365.175) [-3367.503] (-3385.558) (-3380.672) * (-3375.992) (-3362.068) (-3374.212) [-3365.387] -- 0:07:08
Average standard deviation of split frequencies: 0.008416
591000 -- (-3368.147) [-3363.929] (-3382.996) (-3375.972) * [-3366.974] (-3388.817) (-3362.544) (-3372.957) -- 0:07:07
592000 -- (-3361.787) [-3362.060] (-3367.342) (-3374.077) * (-3371.519) (-3393.536) (-3379.727) [-3374.556] -- 0:07:06
593000 -- [-3359.281] (-3369.415) (-3373.138) (-3375.189) * (-3363.499) (-3390.530) [-3387.620] (-3364.177) -- 0:07:05
594000 -- (-3366.586) (-3375.359) [-3362.562] (-3379.437) * [-3354.967] (-3385.827) (-3378.604) (-3364.528) -- 0:07:05
595000 -- (-3379.696) (-3376.269) [-3362.189] (-3372.277) * [-3365.165] (-3374.225) (-3394.259) (-3379.915) -- 0:07:04
Average standard deviation of split frequencies: 0.008197
596000 -- (-3371.231) [-3372.108] (-3375.303) (-3382.373) * [-3363.385] (-3372.413) (-3386.292) (-3381.763) -- 0:07:02
597000 -- (-3377.428) (-3369.421) (-3372.393) [-3363.446] * (-3397.122) [-3371.042] (-3387.991) (-3369.133) -- 0:07:02
598000 -- (-3379.295) [-3358.906] (-3373.196) (-3366.831) * (-3371.932) [-3375.997] (-3374.474) (-3360.139) -- 0:07:01
599000 -- (-3366.425) [-3367.850] (-3375.946) (-3364.682) * (-3382.260) (-3363.701) [-3368.687] (-3383.654) -- 0:07:01
600000 -- [-3355.184] (-3374.043) (-3384.570) (-3363.758) * (-3365.681) (-3364.563) [-3364.147] (-3379.857) -- 0:07:00
Average standard deviation of split frequencies: 0.007824
601000 -- [-3361.437] (-3374.233) (-3375.701) (-3373.455) * [-3355.175] (-3386.359) (-3366.274) (-3387.682) -- 0:06:58
602000 -- [-3364.587] (-3382.843) (-3373.107) (-3373.250) * (-3354.262) (-3388.973) (-3370.992) [-3378.334] -- 0:06:57
603000 -- (-3362.952) (-3365.874) (-3378.607) [-3364.669] * (-3366.985) (-3372.995) [-3372.606] (-3375.434) -- 0:06:57
604000 -- [-3365.001] (-3366.479) (-3379.701) (-3364.591) * (-3364.291) (-3377.211) [-3359.705] (-3373.502) -- 0:06:56
605000 -- (-3370.775) [-3373.042] (-3381.985) (-3367.756) * (-3357.297) (-3370.872) (-3361.536) [-3365.727] -- 0:06:55
Average standard deviation of split frequencies: 0.008180
606000 -- (-3382.290) (-3383.628) (-3375.727) [-3357.061] * (-3359.371) (-3368.696) (-3369.011) [-3369.320] -- 0:06:54
607000 -- [-3369.431] (-3369.826) (-3378.821) (-3367.733) * (-3368.867) (-3377.139) [-3381.415] (-3366.851) -- 0:06:53
608000 -- [-3362.573] (-3369.196) (-3376.081) (-3370.226) * (-3365.172) (-3369.947) [-3363.068] (-3380.686) -- 0:06:52
609000 -- (-3361.912) [-3374.338] (-3384.210) (-3380.451) * (-3379.253) (-3371.252) (-3359.833) [-3355.796] -- 0:06:52
610000 -- (-3375.781) (-3381.736) [-3374.633] (-3380.411) * [-3362.320] (-3373.740) (-3366.131) (-3362.030) -- 0:06:51
Average standard deviation of split frequencies: 0.008679
611000 -- [-3374.867] (-3364.220) (-3372.678) (-3359.038) * (-3385.320) (-3379.805) (-3377.577) [-3360.559] -- 0:06:50
612000 -- (-3372.341) (-3367.489) [-3371.144] (-3370.519) * [-3366.660] (-3377.341) (-3370.671) (-3361.200) -- 0:06:49
613000 -- (-3368.522) [-3361.655] (-3362.659) (-3375.347) * (-3373.684) (-3378.868) (-3370.946) [-3358.345] -- 0:06:48
614000 -- [-3368.106] (-3391.658) (-3375.619) (-3370.318) * (-3380.256) (-3374.488) [-3358.855] (-3373.620) -- 0:06:47
615000 -- (-3381.830) (-3361.856) [-3361.203] (-3377.742) * (-3374.880) (-3381.888) [-3357.189] (-3361.672) -- 0:06:46
Average standard deviation of split frequencies: 0.008464
616000 -- (-3367.509) [-3364.344] (-3363.097) (-3383.719) * (-3375.311) (-3373.299) [-3365.257] (-3367.980) -- 0:06:45
617000 -- (-3375.527) (-3363.988) (-3374.972) [-3375.219] * (-3358.964) [-3365.333] (-3387.962) (-3376.722) -- 0:06:44
618000 -- (-3384.301) [-3367.039] (-3360.886) (-3375.753) * (-3368.146) (-3379.663) [-3361.246] (-3374.824) -- 0:06:43
619000 -- (-3394.267) (-3397.183) (-3354.539) [-3360.216] * (-3376.323) (-3389.534) (-3372.719) [-3366.538] -- 0:06:41
620000 -- (-3371.893) [-3367.422] (-3372.559) (-3384.413) * (-3378.336) (-3389.163) [-3358.602] (-3361.690) -- 0:06:40
Average standard deviation of split frequencies: 0.008124
621000 -- (-3383.079) [-3364.308] (-3373.511) (-3388.915) * (-3354.412) [-3376.812] (-3385.734) (-3369.403) -- 0:06:39
622000 -- (-3368.883) (-3365.423) [-3363.887] (-3368.948) * (-3377.195) (-3382.925) (-3372.089) [-3365.030] -- 0:06:38
623000 -- (-3375.271) (-3370.283) [-3370.323] (-3361.357) * (-3379.508) (-3383.328) [-3357.788] (-3368.589) -- 0:06:36
624000 -- (-3393.444) (-3367.431) [-3369.889] (-3381.503) * [-3380.575] (-3388.355) (-3359.531) (-3370.116) -- 0:06:35
625000 -- (-3360.684) (-3366.219) [-3358.172] (-3355.605) * (-3385.482) (-3385.249) [-3355.597] (-3357.355) -- 0:06:34
Average standard deviation of split frequencies: 0.007850
626000 -- (-3367.000) (-3378.200) [-3379.768] (-3372.415) * (-3391.856) (-3364.921) (-3363.538) [-3362.794] -- 0:06:33
627000 -- (-3361.788) [-3371.269] (-3387.685) (-3365.863) * (-3371.944) [-3368.791] (-3378.960) (-3379.770) -- 0:06:32
628000 -- [-3373.179] (-3371.669) (-3386.133) (-3379.324) * (-3378.580) (-3379.251) [-3359.430] (-3364.186) -- 0:06:30
629000 -- (-3371.846) [-3374.180] (-3392.905) (-3372.741) * (-3362.641) (-3383.070) (-3378.560) [-3360.953] -- 0:06:29
630000 -- (-3369.954) (-3371.784) (-3374.960) [-3357.789] * [-3368.832] (-3379.910) (-3388.034) (-3376.058) -- 0:06:28
Average standard deviation of split frequencies: 0.007656
631000 -- [-3371.771] (-3376.616) (-3376.023) (-3357.079) * (-3365.869) (-3392.050) [-3356.684] (-3364.649) -- 0:06:27
632000 -- (-3366.623) (-3384.903) (-3366.914) [-3366.136] * (-3383.038) (-3378.332) (-3372.294) [-3360.584] -- 0:06:26
633000 -- [-3381.752] (-3393.276) (-3373.004) (-3380.383) * [-3363.191] (-3372.554) (-3378.714) (-3375.557) -- 0:06:25
634000 -- (-3376.058) (-3387.946) [-3384.154] (-3372.271) * [-3364.758] (-3382.421) (-3366.583) (-3373.705) -- 0:06:24
635000 -- (-3366.375) (-3371.912) (-3391.678) [-3366.435] * (-3371.596) (-3378.524) (-3375.249) [-3363.093] -- 0:06:23
Average standard deviation of split frequencies: 0.007524
636000 -- (-3367.586) (-3383.931) [-3371.110] (-3362.323) * [-3373.233] (-3399.817) (-3373.536) (-3375.789) -- 0:06:21
637000 -- [-3354.631] (-3378.455) (-3397.096) (-3365.490) * (-3369.484) (-3374.298) [-3369.703] (-3378.803) -- 0:06:20
638000 -- [-3368.433] (-3386.140) (-3395.555) (-3380.436) * (-3377.497) (-3383.181) [-3363.048] (-3384.293) -- 0:06:19
639000 -- (-3371.098) (-3352.801) (-3375.159) [-3366.155] * [-3362.440] (-3369.493) (-3381.046) (-3378.743) -- 0:06:18
640000 -- (-3381.983) (-3372.645) [-3354.846] (-3379.688) * (-3356.785) (-3376.972) (-3372.668) [-3370.884] -- 0:06:17
Average standard deviation of split frequencies: 0.007603
641000 -- (-3385.796) [-3364.951] (-3385.953) (-3369.139) * (-3365.141) (-3383.254) (-3382.045) [-3365.898] -- 0:06:16
642000 -- (-3378.728) (-3371.519) (-3373.446) [-3358.224] * (-3393.876) [-3374.422] (-3377.612) (-3380.599) -- 0:06:15
643000 -- (-3376.219) (-3367.084) [-3360.987] (-3389.780) * [-3375.167] (-3382.609) (-3361.268) (-3379.468) -- 0:06:14
644000 -- (-3381.697) (-3374.674) [-3373.155] (-3367.270) * (-3372.309) [-3362.697] (-3383.647) (-3370.256) -- 0:06:12
645000 -- (-3385.280) [-3361.877] (-3373.485) (-3361.713) * [-3365.464] (-3360.078) (-3381.267) (-3368.244) -- 0:06:11
Average standard deviation of split frequencies: 0.007740
646000 -- (-3379.860) [-3362.823] (-3368.739) (-3371.838) * (-3385.922) [-3366.387] (-3366.865) (-3363.958) -- 0:06:10
647000 -- (-3371.862) (-3363.626) [-3367.371] (-3385.114) * (-3369.477) (-3381.505) (-3374.780) [-3352.548] -- 0:06:09
648000 -- (-3372.061) (-3378.998) [-3370.330] (-3376.630) * (-3381.935) (-3364.262) (-3382.076) [-3363.896] -- 0:06:08
649000 -- (-3381.388) (-3378.617) (-3365.741) [-3375.849] * (-3377.242) [-3351.829] (-3366.995) (-3376.072) -- 0:06:07
650000 -- [-3365.604] (-3371.566) (-3371.105) (-3360.785) * (-3380.605) (-3374.828) [-3360.400] (-3363.956) -- 0:06:06
Average standard deviation of split frequencies: 0.007552
651000 -- (-3376.193) (-3373.133) (-3371.596) [-3359.370] * (-3359.305) [-3356.476] (-3370.871) (-3378.991) -- 0:06:05
652000 -- (-3385.082) (-3388.319) [-3362.888] (-3366.459) * (-3372.727) (-3374.846) [-3356.427] (-3378.423) -- 0:06:03
653000 -- (-3382.660) [-3384.176] (-3381.768) (-3377.995) * (-3369.829) (-3377.066) [-3359.866] (-3384.853) -- 0:06:02
654000 -- (-3378.670) (-3370.615) (-3384.292) [-3363.881] * (-3364.768) [-3367.760] (-3374.511) (-3384.485) -- 0:06:01
655000 -- (-3373.687) [-3359.716] (-3375.740) (-3380.223) * (-3374.919) [-3355.003] (-3370.602) (-3384.894) -- 0:06:00
Average standard deviation of split frequencies: 0.007556
656000 -- (-3370.626) (-3385.649) (-3379.458) [-3374.012] * [-3371.764] (-3383.154) (-3374.029) (-3366.677) -- 0:05:59
657000 -- [-3369.572] (-3383.153) (-3361.258) (-3370.385) * (-3372.911) (-3384.137) [-3372.758] (-3371.736) -- 0:05:58
658000 -- (-3385.256) [-3362.438] (-3378.042) (-3360.295) * [-3370.498] (-3381.863) (-3362.359) (-3363.735) -- 0:05:57
659000 -- (-3361.880) [-3376.288] (-3374.612) (-3369.947) * (-3371.089) (-3380.094) [-3371.635] (-3390.861) -- 0:05:56
660000 -- (-3367.554) [-3372.123] (-3374.609) (-3375.889) * (-3383.148) [-3370.973] (-3377.478) (-3380.956) -- 0:05:54
Average standard deviation of split frequencies: 0.007373
661000 -- (-3364.795) (-3376.603) (-3373.761) [-3357.634] * (-3368.974) (-3377.724) [-3366.040] (-3367.994) -- 0:05:53
662000 -- (-3382.894) (-3393.498) (-3369.968) [-3358.483] * (-3369.212) [-3362.828] (-3371.103) (-3381.988) -- 0:05:52
663000 -- (-3374.675) (-3374.500) (-3375.541) [-3361.181] * (-3373.815) (-3368.988) [-3375.544] (-3386.273) -- 0:05:51
664000 -- [-3370.331] (-3382.000) (-3379.871) (-3375.143) * (-3365.692) [-3357.857] (-3371.325) (-3382.974) -- 0:05:50
665000 -- (-3376.560) (-3376.071) [-3374.078] (-3367.407) * (-3357.377) (-3372.034) [-3371.093] (-3393.273) -- 0:05:49
Average standard deviation of split frequencies: 0.007293
666000 -- (-3371.828) (-3361.028) [-3369.455] (-3374.636) * (-3369.857) (-3366.467) [-3365.446] (-3374.380) -- 0:05:48
667000 -- [-3362.756] (-3371.946) (-3363.919) (-3383.351) * (-3356.884) (-3364.335) [-3352.407] (-3387.473) -- 0:05:46
668000 -- (-3383.421) (-3382.836) (-3366.285) [-3366.905] * (-3372.890) [-3365.590] (-3370.392) (-3387.093) -- 0:05:45
669000 -- (-3382.303) [-3365.461] (-3360.723) (-3371.814) * (-3370.665) [-3356.664] (-3393.411) (-3382.754) -- 0:05:44
670000 -- (-3375.010) (-3373.142) (-3373.103) [-3368.787] * (-3363.575) [-3360.911] (-3384.097) (-3381.669) -- 0:05:43
Average standard deviation of split frequencies: 0.007221
671000 -- (-3368.852) (-3376.402) [-3363.984] (-3371.976) * (-3365.064) (-3370.261) (-3375.297) [-3378.430] -- 0:05:42
672000 -- [-3357.812] (-3379.888) (-3365.265) (-3368.376) * (-3365.418) (-3373.047) (-3377.728) [-3363.231] -- 0:05:41
673000 -- (-3374.943) (-3370.632) [-3368.114] (-3364.032) * (-3353.078) [-3372.558] (-3372.589) (-3379.463) -- 0:05:40
674000 -- [-3373.881] (-3380.826) (-3377.735) (-3375.257) * (-3380.289) (-3386.375) [-3361.260] (-3370.251) -- 0:05:39
675000 -- (-3384.806) [-3359.993] (-3387.058) (-3369.534) * [-3364.657] (-3375.953) (-3367.884) (-3395.375) -- 0:05:37
Average standard deviation of split frequencies: 0.007333
676000 -- (-3371.963) (-3379.873) (-3381.759) [-3351.897] * (-3382.952) [-3359.632] (-3387.158) (-3378.436) -- 0:05:36
677000 -- [-3367.112] (-3376.613) (-3389.777) (-3365.531) * [-3363.788] (-3360.395) (-3382.181) (-3370.229) -- 0:05:35
678000 -- [-3362.533] (-3374.910) (-3375.239) (-3374.075) * (-3368.332) (-3374.800) (-3369.704) [-3370.457] -- 0:05:34
679000 -- (-3375.244) [-3377.259] (-3379.302) (-3374.797) * (-3359.091) (-3386.563) (-3375.771) [-3366.168] -- 0:05:33
680000 -- (-3363.013) [-3364.507] (-3381.036) (-3385.563) * (-3385.241) (-3382.462) [-3358.257] (-3376.088) -- 0:05:32
Average standard deviation of split frequencies: 0.007261
681000 -- [-3363.170] (-3370.508) (-3376.333) (-3373.936) * (-3380.844) (-3372.600) [-3367.293] (-3387.303) -- 0:05:31
682000 -- [-3366.357] (-3384.103) (-3386.993) (-3369.013) * (-3385.286) (-3384.176) [-3362.208] (-3376.383) -- 0:05:30
683000 -- (-3381.111) (-3367.679) (-3386.701) [-3364.336] * [-3354.248] (-3380.495) (-3369.641) (-3359.495) -- 0:05:29
684000 -- (-3360.682) [-3367.668] (-3376.828) (-3371.005) * (-3366.044) (-3374.054) (-3382.611) [-3370.357] -- 0:05:28
685000 -- [-3371.343] (-3371.531) (-3388.443) (-3365.350) * (-3364.393) (-3380.849) [-3368.902] (-3373.342) -- 0:05:26
Average standard deviation of split frequencies: 0.006976
686000 -- [-3368.379] (-3375.194) (-3389.554) (-3383.358) * (-3382.722) (-3384.949) (-3371.352) [-3355.817] -- 0:05:25
687000 -- (-3395.100) [-3366.210] (-3372.104) (-3370.679) * (-3372.232) (-3367.976) (-3393.291) [-3363.896] -- 0:05:25
688000 -- (-3379.935) [-3363.928] (-3378.899) (-3364.143) * (-3389.887) [-3367.907] (-3366.328) (-3360.370) -- 0:05:24
689000 -- [-3360.589] (-3374.564) (-3362.688) (-3374.119) * (-3364.303) (-3381.776) [-3356.975] (-3375.703) -- 0:05:23
690000 -- (-3375.449) [-3372.829] (-3364.276) (-3378.317) * (-3366.433) (-3375.102) [-3367.164] (-3373.064) -- 0:05:22
Average standard deviation of split frequencies: 0.007342
691000 -- (-3385.144) (-3369.853) [-3371.452] (-3376.749) * [-3374.863] (-3382.669) (-3361.489) (-3369.664) -- 0:05:21
692000 -- (-3372.451) [-3367.932] (-3368.183) (-3365.328) * (-3380.585) (-3372.555) (-3379.446) [-3368.305] -- 0:05:20
693000 -- [-3364.655] (-3369.570) (-3372.372) (-3371.756) * (-3372.839) (-3378.645) (-3377.163) [-3362.410] -- 0:05:19
694000 -- (-3375.114) (-3384.379) [-3367.933] (-3382.426) * (-3374.569) (-3370.132) [-3363.909] (-3367.673) -- 0:05:18
695000 -- (-3370.380) (-3378.154) (-3371.242) [-3370.704] * (-3369.409) (-3373.053) [-3359.339] (-3375.319) -- 0:05:17
Average standard deviation of split frequencies: 0.007225
696000 -- (-3391.909) (-3364.629) (-3368.167) [-3368.233] * [-3371.298] (-3375.013) (-3359.559) (-3373.004) -- 0:05:17
697000 -- [-3368.372] (-3373.642) (-3379.571) (-3370.280) * (-3364.579) (-3367.765) [-3371.904] (-3370.144) -- 0:05:16
698000 -- (-3377.562) (-3374.689) (-3367.027) [-3369.299] * (-3380.646) (-3374.288) (-3394.769) [-3364.712] -- 0:05:14
699000 -- (-3370.692) (-3378.660) [-3364.133] (-3380.454) * [-3362.652] (-3362.143) (-3369.488) (-3373.530) -- 0:05:14
700000 -- [-3369.389] (-3373.734) (-3363.375) (-3363.688) * [-3361.531] (-3369.857) (-3352.307) (-3369.507) -- 0:05:13
Average standard deviation of split frequencies: 0.007605
701000 -- (-3374.876) (-3378.736) (-3366.856) [-3368.058] * (-3362.860) (-3380.204) (-3375.505) [-3365.632] -- 0:05:12
702000 -- (-3368.300) (-3362.146) (-3371.542) [-3370.544] * (-3364.556) (-3397.986) [-3350.313] (-3377.921) -- 0:05:11
703000 -- [-3367.799] (-3368.474) (-3366.899) (-3368.518) * [-3360.859] (-3388.931) (-3366.376) (-3364.485) -- 0:05:10
704000 -- (-3380.618) [-3376.915] (-3372.205) (-3369.912) * (-3367.076) (-3369.622) (-3383.948) [-3371.072] -- 0:05:09
705000 -- (-3380.634) (-3378.991) (-3365.961) [-3370.848] * (-3375.939) (-3370.898) (-3364.157) [-3361.293] -- 0:05:08
Average standard deviation of split frequencies: 0.007669
706000 -- (-3376.919) (-3367.178) (-3362.320) [-3364.339] * (-3373.683) (-3400.811) (-3371.435) [-3373.494] -- 0:05:07
707000 -- (-3386.885) (-3384.791) [-3358.362] (-3373.805) * (-3362.569) [-3361.646] (-3369.508) (-3374.557) -- 0:05:06
708000 -- (-3369.353) (-3370.022) [-3356.192] (-3377.971) * (-3369.095) (-3363.024) (-3361.440) [-3372.639] -- 0:05:06
709000 -- (-3388.561) [-3368.778] (-3357.594) (-3375.229) * (-3378.026) [-3368.150] (-3372.054) (-3363.935) -- 0:05:04
710000 -- [-3371.878] (-3367.950) (-3362.185) (-3383.954) * [-3367.708] (-3366.946) (-3370.249) (-3367.746) -- 0:05:03
Average standard deviation of split frequencies: 0.007397
711000 -- (-3373.245) (-3370.675) [-3363.511] (-3369.586) * [-3369.700] (-3372.855) (-3385.897) (-3380.122) -- 0:05:02
712000 -- (-3373.929) (-3390.287) [-3362.577] (-3369.678) * [-3364.467] (-3367.729) (-3370.836) (-3368.012) -- 0:05:02
713000 -- [-3367.966] (-3373.128) (-3374.200) (-3379.952) * (-3357.584) [-3353.507] (-3381.773) (-3367.814) -- 0:05:01
714000 -- (-3370.838) (-3365.750) [-3362.087] (-3377.046) * (-3378.037) (-3366.584) [-3366.170] (-3375.208) -- 0:05:00
715000 -- (-3372.899) (-3372.456) (-3375.054) [-3365.496] * [-3369.299] (-3368.707) (-3358.819) (-3372.277) -- 0:04:59
Average standard deviation of split frequencies: 0.007462
716000 -- (-3369.215) (-3383.157) (-3380.631) [-3375.618] * (-3381.300) (-3381.952) [-3355.412] (-3377.613) -- 0:04:58
717000 -- [-3359.743] (-3386.627) (-3381.837) (-3373.833) * (-3378.974) (-3371.999) [-3359.276] (-3372.945) -- 0:04:57
718000 -- [-3373.067] (-3375.893) (-3382.340) (-3383.556) * (-3376.589) [-3381.905] (-3374.541) (-3370.862) -- 0:04:56
719000 -- (-3391.405) [-3368.537] (-3396.181) (-3369.975) * [-3371.183] (-3371.924) (-3380.897) (-3370.103) -- 0:04:55
720000 -- [-3359.727] (-3375.444) (-3405.715) (-3363.527) * [-3370.743] (-3361.680) (-3371.564) (-3358.536) -- 0:04:54
Average standard deviation of split frequencies: 0.007314
721000 -- (-3364.658) (-3385.431) (-3367.635) [-3362.229] * (-3362.078) (-3367.354) [-3355.156] (-3376.475) -- 0:04:53
722000 -- (-3359.462) (-3374.249) [-3366.294] (-3379.769) * (-3373.046) (-3377.601) [-3364.970] (-3365.051) -- 0:04:52
723000 -- [-3365.721] (-3382.186) (-3371.050) (-3377.689) * (-3388.532) (-3370.052) (-3378.326) [-3362.289] -- 0:04:51
724000 -- [-3370.743] (-3384.038) (-3370.595) (-3367.423) * (-3378.962) (-3373.871) [-3367.038] (-3373.814) -- 0:04:50
725000 -- (-3365.740) (-3392.837) (-3385.301) [-3370.496] * (-3391.243) [-3375.174] (-3372.918) (-3369.119) -- 0:04:49
Average standard deviation of split frequencies: 0.006828
726000 -- (-3372.760) (-3374.453) (-3379.066) [-3364.750] * (-3379.893) [-3363.140] (-3368.027) (-3382.493) -- 0:04:48
727000 -- (-3370.497) (-3377.849) (-3375.644) [-3366.401] * (-3366.693) [-3369.586] (-3380.092) (-3377.689) -- 0:04:47
728000 -- [-3367.918] (-3366.427) (-3379.977) (-3372.625) * (-3374.841) (-3372.073) (-3375.810) [-3377.680] -- 0:04:46
729000 -- (-3368.146) (-3363.292) (-3379.645) [-3366.123] * (-3377.802) (-3368.929) (-3383.466) [-3354.520] -- 0:04:45
730000 -- [-3382.578] (-3361.908) (-3380.488) (-3392.693) * (-3379.147) (-3368.586) (-3369.965) [-3360.995] -- 0:04:44
Average standard deviation of split frequencies: 0.006901
731000 -- (-3369.250) [-3356.570] (-3384.801) (-3368.399) * (-3382.007) [-3368.569] (-3380.021) (-3365.102) -- 0:04:44
732000 -- (-3382.601) [-3351.615] (-3359.493) (-3372.921) * (-3379.632) (-3385.306) (-3375.804) [-3374.409] -- 0:04:43
733000 -- (-3381.134) [-3364.940] (-3367.640) (-3364.951) * (-3378.487) (-3356.853) (-3382.214) [-3371.615] -- 0:04:41
734000 -- (-3373.510) (-3370.211) [-3380.202] (-3376.580) * (-3366.721) (-3372.911) (-3384.990) [-3354.055] -- 0:04:41
735000 -- (-3374.946) (-3371.693) [-3370.734] (-3370.002) * [-3362.495] (-3359.440) (-3367.838) (-3368.480) -- 0:04:40
Average standard deviation of split frequencies: 0.007375
736000 -- (-3375.807) [-3360.500] (-3378.632) (-3365.219) * (-3386.663) [-3368.350] (-3363.004) (-3385.025) -- 0:04:39
737000 -- (-3372.986) (-3368.140) [-3365.623] (-3363.032) * [-3372.880] (-3371.814) (-3365.435) (-3375.158) -- 0:04:37
738000 -- (-3384.932) (-3381.627) (-3379.134) [-3357.847] * (-3382.049) (-3363.097) (-3362.529) [-3362.507] -- 0:04:37
739000 -- (-3379.569) (-3368.664) (-3371.261) [-3362.924] * [-3369.436] (-3377.747) (-3362.260) (-3372.465) -- 0:04:36
740000 -- (-3374.104) (-3378.977) (-3372.569) [-3359.576] * (-3368.884) (-3363.336) [-3367.935] (-3389.332) -- 0:04:35
Average standard deviation of split frequencies: 0.007850
741000 -- [-3364.946] (-3372.182) (-3359.553) (-3376.738) * [-3365.865] (-3369.210) (-3373.155) (-3367.959) -- 0:04:34
742000 -- (-3370.316) (-3374.344) (-3391.111) [-3375.531] * (-3368.537) [-3349.528] (-3394.239) (-3366.036) -- 0:04:33
743000 -- [-3358.546] (-3374.084) (-3379.187) (-3367.790) * (-3374.420) (-3372.531) (-3387.114) [-3365.952] -- 0:04:32
744000 -- (-3395.602) (-3371.487) (-3364.688) [-3364.319] * (-3360.394) (-3371.045) [-3362.122] (-3375.828) -- 0:04:31
745000 -- (-3383.238) (-3361.098) [-3373.976] (-3380.668) * (-3360.769) (-3369.495) [-3371.076] (-3403.814) -- 0:04:30
Average standard deviation of split frequencies: 0.007602
746000 -- (-3393.089) (-3364.604) [-3370.489] (-3372.811) * [-3364.386] (-3376.794) (-3369.510) (-3397.002) -- 0:04:28
747000 -- (-3379.542) [-3366.189] (-3384.715) (-3364.879) * (-3363.057) (-3377.285) [-3369.798] (-3382.734) -- 0:04:27
748000 -- (-3396.974) (-3367.718) [-3367.770] (-3369.212) * (-3372.108) (-3376.356) [-3371.133] (-3379.165) -- 0:04:26
749000 -- (-3393.868) [-3357.232] (-3366.884) (-3371.020) * [-3369.129] (-3373.962) (-3366.745) (-3377.781) -- 0:04:25
750000 -- (-3382.420) [-3360.455] (-3371.361) (-3385.858) * (-3368.050) (-3374.658) [-3364.746] (-3371.284) -- 0:04:24
Average standard deviation of split frequencies: 0.007555
751000 -- (-3374.492) [-3356.863] (-3362.070) (-3369.443) * (-3364.267) (-3374.561) [-3361.259] (-3356.993) -- 0:04:23
752000 -- (-3396.591) (-3378.808) (-3365.064) [-3368.784] * (-3373.256) (-3368.732) [-3377.387] (-3374.957) -- 0:04:22
753000 -- (-3393.077) (-3377.851) (-3379.303) [-3365.176] * [-3363.728] (-3365.314) (-3376.330) (-3361.235) -- 0:04:21
754000 -- [-3365.834] (-3367.356) (-3374.726) (-3366.041) * (-3371.538) [-3354.051] (-3384.283) (-3375.712) -- 0:04:20
755000 -- (-3363.570) (-3374.651) (-3369.462) [-3362.114] * (-3386.732) [-3357.028] (-3371.396) (-3389.312) -- 0:04:18
Average standard deviation of split frequencies: 0.007804
756000 -- (-3370.001) (-3362.060) [-3362.689] (-3369.208) * (-3377.288) (-3366.133) (-3376.351) [-3365.140] -- 0:04:17
757000 -- (-3371.687) (-3378.396) [-3366.014] (-3370.184) * (-3375.861) (-3368.915) (-3375.280) [-3351.511] -- 0:04:16
758000 -- (-3375.890) (-3384.995) (-3372.695) [-3369.710] * [-3369.232] (-3364.288) (-3377.638) (-3367.383) -- 0:04:15
759000 -- (-3373.510) (-3388.061) (-3376.629) [-3362.739] * (-3374.353) (-3385.994) (-3369.244) [-3363.710] -- 0:04:14
760000 -- (-3375.108) [-3367.617] (-3382.907) (-3376.113) * (-3364.351) [-3368.549] (-3390.679) (-3370.043) -- 0:04:13
Average standard deviation of split frequencies: 0.007437
761000 -- (-3378.695) (-3380.601) [-3376.996] (-3368.068) * (-3374.198) (-3356.116) (-3379.075) [-3365.498] -- 0:04:12
762000 -- (-3400.780) [-3364.246] (-3371.420) (-3373.249) * (-3360.265) [-3361.424] (-3378.418) (-3380.484) -- 0:04:11
763000 -- (-3363.064) (-3361.263) (-3375.303) [-3370.089] * [-3369.126] (-3359.064) (-3366.225) (-3384.828) -- 0:04:10
764000 -- (-3369.315) (-3376.475) [-3372.270] (-3382.068) * (-3366.475) [-3362.919] (-3367.352) (-3383.753) -- 0:04:08
765000 -- [-3367.011] (-3360.175) (-3376.170) (-3385.272) * (-3375.989) [-3359.957] (-3369.791) (-3388.641) -- 0:04:07
Average standard deviation of split frequencies: 0.007515
766000 -- (-3369.475) (-3361.135) (-3373.893) [-3363.259] * (-3383.302) [-3364.389] (-3373.150) (-3368.044) -- 0:04:06
767000 -- (-3378.325) (-3374.820) (-3367.368) [-3360.951] * [-3363.661] (-3373.752) (-3366.709) (-3378.893) -- 0:04:05
768000 -- (-3368.959) [-3366.012] (-3373.177) (-3376.039) * (-3376.061) [-3360.868] (-3364.829) (-3371.745) -- 0:04:04
769000 -- (-3371.127) [-3369.701] (-3363.460) (-3373.233) * [-3359.269] (-3366.656) (-3396.278) (-3368.161) -- 0:04:03
770000 -- (-3379.735) [-3372.279] (-3369.517) (-3364.470) * (-3378.388) (-3360.622) (-3387.783) [-3369.925] -- 0:04:02
Average standard deviation of split frequencies: 0.007099
771000 -- [-3366.552] (-3370.188) (-3369.832) (-3376.773) * (-3391.946) [-3359.678] (-3381.543) (-3363.784) -- 0:04:01
772000 -- [-3361.637] (-3366.736) (-3387.534) (-3377.956) * (-3385.950) [-3374.035] (-3391.473) (-3375.507) -- 0:04:00
773000 -- [-3360.730] (-3363.574) (-3366.649) (-3376.883) * (-3376.572) [-3361.608] (-3382.305) (-3373.718) -- 0:03:59
774000 -- (-3382.420) (-3387.887) [-3363.967] (-3368.969) * (-3369.444) [-3362.404] (-3377.081) (-3391.049) -- 0:03:57
775000 -- (-3385.916) (-3375.571) [-3365.089] (-3363.707) * (-3366.529) [-3367.076] (-3391.286) (-3368.682) -- 0:03:56
Average standard deviation of split frequencies: 0.007161
776000 -- (-3381.038) (-3367.095) (-3365.339) [-3368.441] * (-3378.904) (-3367.069) [-3374.462] (-3369.493) -- 0:03:55
777000 -- (-3378.654) (-3376.336) [-3357.580] (-3376.649) * (-3379.947) (-3368.004) [-3370.694] (-3379.739) -- 0:03:54
778000 -- (-3380.968) (-3360.738) [-3357.961] (-3385.356) * (-3385.723) (-3369.389) (-3371.568) [-3371.953] -- 0:03:53
779000 -- (-3374.306) (-3374.599) [-3358.469] (-3369.865) * (-3387.069) (-3366.068) (-3374.708) [-3359.405] -- 0:03:52
780000 -- (-3374.540) [-3361.152] (-3372.657) (-3398.153) * (-3373.512) [-3353.433] (-3370.964) (-3373.731) -- 0:03:51
Average standard deviation of split frequencies: 0.007045
781000 -- [-3358.835] (-3372.348) (-3371.346) (-3363.882) * (-3359.513) [-3358.935] (-3387.877) (-3380.353) -- 0:03:50
782000 -- [-3368.462] (-3363.845) (-3380.818) (-3369.219) * (-3369.276) [-3365.806] (-3373.529) (-3378.034) -- 0:03:49
783000 -- (-3377.102) [-3361.870] (-3373.119) (-3361.223) * (-3386.478) (-3379.836) (-3366.644) [-3360.658] -- 0:03:48
784000 -- [-3360.036] (-3385.622) (-3389.361) (-3369.436) * (-3381.868) [-3367.421] (-3367.428) (-3379.331) -- 0:03:47
785000 -- [-3360.960] (-3365.699) (-3375.648) (-3392.197) * (-3381.963) [-3374.410] (-3385.889) (-3367.491) -- 0:03:45
Average standard deviation of split frequencies: 0.006906
786000 -- [-3352.012] (-3361.451) (-3372.139) (-3374.541) * (-3363.301) (-3386.936) (-3383.574) [-3363.702] -- 0:03:44
787000 -- [-3367.207] (-3377.214) (-3387.421) (-3361.768) * [-3378.856] (-3375.387) (-3381.901) (-3376.818) -- 0:03:43
788000 -- [-3364.729] (-3395.985) (-3378.918) (-3364.207) * (-3389.018) (-3373.560) [-3360.019] (-3381.096) -- 0:03:42
789000 -- (-3394.422) (-3377.697) [-3363.592] (-3376.656) * (-3398.793) [-3368.432] (-3374.216) (-3374.485) -- 0:03:41
790000 -- (-3391.253) (-3374.438) (-3368.664) [-3365.217] * (-3368.053) [-3361.943] (-3379.856) (-3369.823) -- 0:03:40
Average standard deviation of split frequencies: 0.007100
791000 -- (-3375.115) [-3367.121] (-3371.790) (-3363.117) * (-3361.200) [-3357.138] (-3374.658) (-3376.066) -- 0:03:39
792000 -- (-3377.728) [-3356.828] (-3398.441) (-3351.533) * (-3362.591) [-3376.602] (-3390.549) (-3373.011) -- 0:03:38
793000 -- (-3385.594) (-3358.380) (-3370.666) [-3370.364] * (-3373.244) [-3359.879] (-3372.211) (-3382.244) -- 0:03:37
794000 -- (-3378.221) [-3365.737] (-3380.187) (-3377.628) * (-3375.935) [-3353.374] (-3365.555) (-3376.420) -- 0:03:36
795000 -- (-3373.515) [-3361.058] (-3385.718) (-3371.508) * (-3383.916) [-3362.233] (-3376.844) (-3364.012) -- 0:03:34
Average standard deviation of split frequencies: 0.007089
796000 -- (-3379.142) (-3367.250) [-3375.935] (-3380.029) * (-3371.544) (-3364.002) [-3374.112] (-3379.231) -- 0:03:33
797000 -- (-3386.954) [-3359.351] (-3365.975) (-3377.773) * (-3379.955) [-3359.257] (-3375.806) (-3363.028) -- 0:03:32
798000 -- (-3373.437) [-3365.882] (-3366.516) (-3370.999) * (-3368.093) [-3368.172] (-3369.157) (-3379.855) -- 0:03:31
799000 -- (-3375.695) [-3362.804] (-3376.125) (-3374.928) * [-3368.122] (-3392.264) (-3366.223) (-3387.518) -- 0:03:30
800000 -- (-3374.817) [-3373.382] (-3375.493) (-3367.431) * (-3364.140) (-3379.559) [-3369.258] (-3376.213) -- 0:03:29
Average standard deviation of split frequencies: 0.006655
801000 -- [-3368.219] (-3362.273) (-3384.230) (-3379.945) * (-3368.900) (-3365.081) [-3369.521] (-3392.693) -- 0:03:28
802000 -- (-3371.108) [-3367.270] (-3393.632) (-3378.181) * (-3372.457) (-3385.902) [-3373.987] (-3367.315) -- 0:03:27
803000 -- (-3367.034) [-3374.807] (-3384.997) (-3385.631) * [-3355.833] (-3376.601) (-3375.798) (-3360.821) -- 0:03:26
804000 -- (-3376.754) [-3355.869] (-3377.822) (-3372.648) * (-3381.324) (-3363.392) [-3363.387] (-3394.923) -- 0:03:25
805000 -- (-3369.370) (-3365.485) [-3362.234] (-3369.879) * (-3373.964) (-3381.524) [-3370.673] (-3373.267) -- 0:03:23
Average standard deviation of split frequencies: 0.006593
806000 -- (-3366.262) [-3368.646] (-3374.223) (-3386.440) * (-3377.524) (-3367.679) [-3365.277] (-3374.428) -- 0:03:22
807000 -- (-3383.271) [-3364.348] (-3373.063) (-3367.346) * (-3370.730) [-3368.932] (-3390.750) (-3362.362) -- 0:03:21
808000 -- (-3358.899) (-3381.724) [-3363.833] (-3373.105) * (-3383.522) (-3391.634) [-3361.503] (-3372.725) -- 0:03:20
809000 -- [-3354.524] (-3387.324) (-3377.455) (-3354.630) * (-3371.555) (-3383.672) [-3357.244] (-3361.357) -- 0:03:19
810000 -- (-3382.468) (-3363.888) (-3375.274) [-3359.074] * [-3359.885] (-3373.722) (-3367.220) (-3363.973) -- 0:03:18
Average standard deviation of split frequencies: 0.006379
811000 -- (-3383.978) [-3361.125] (-3374.870) (-3359.632) * (-3359.808) (-3387.869) (-3365.936) [-3360.978] -- 0:03:17
812000 -- (-3384.661) (-3378.452) [-3360.795] (-3363.352) * (-3369.104) [-3377.277] (-3370.552) (-3390.750) -- 0:03:16
813000 -- (-3375.267) (-3374.718) (-3364.615) [-3364.743] * (-3365.849) (-3383.186) [-3365.954] (-3387.558) -- 0:03:15
814000 -- (-3360.025) (-3384.710) [-3356.004] (-3381.238) * [-3356.422] (-3381.433) (-3356.686) (-3363.721) -- 0:03:14
815000 -- (-3378.123) (-3371.591) (-3375.535) [-3355.359] * [-3360.064] (-3370.075) (-3384.022) (-3367.244) -- 0:03:13
Average standard deviation of split frequencies: 0.006460
816000 -- (-3363.680) (-3382.775) (-3374.585) [-3358.846] * [-3367.446] (-3369.600) (-3371.738) (-3362.703) -- 0:03:12
817000 -- [-3353.733] (-3374.216) (-3381.157) (-3365.716) * (-3370.606) [-3363.766] (-3397.567) (-3371.576) -- 0:03:11
818000 -- (-3366.035) (-3371.405) [-3356.365] (-3367.958) * [-3361.919] (-3368.696) (-3369.018) (-3368.975) -- 0:03:10
819000 -- (-3369.600) (-3370.590) [-3352.684] (-3371.417) * (-3379.987) [-3357.800] (-3363.187) (-3376.884) -- 0:03:08
820000 -- (-3382.790) (-3358.913) [-3361.923] (-3356.994) * (-3365.246) [-3375.313] (-3366.622) (-3369.739) -- 0:03:07
Average standard deviation of split frequencies: 0.006649
821000 -- (-3376.522) [-3366.675] (-3365.550) (-3381.738) * (-3369.092) (-3392.557) (-3371.116) [-3365.521] -- 0:03:06
822000 -- [-3362.041] (-3349.291) (-3368.984) (-3382.955) * (-3373.264) (-3373.683) (-3378.414) [-3370.321] -- 0:03:05
823000 -- (-3383.036) [-3366.998] (-3377.411) (-3388.059) * (-3366.038) [-3366.051] (-3369.184) (-3375.053) -- 0:03:04
824000 -- (-3365.688) (-3360.818) [-3372.340] (-3385.121) * [-3369.561] (-3377.103) (-3364.568) (-3379.943) -- 0:03:03
825000 -- (-3367.478) [-3360.808] (-3368.617) (-3400.595) * (-3379.827) (-3362.571) [-3363.034] (-3371.207) -- 0:03:02
Average standard deviation of split frequencies: 0.006468
826000 -- (-3379.920) [-3365.858] (-3375.240) (-3378.886) * (-3371.257) [-3370.247] (-3372.922) (-3375.788) -- 0:03:01
827000 -- (-3381.661) [-3362.235] (-3373.559) (-3380.453) * (-3374.321) (-3369.650) [-3366.831] (-3379.309) -- 0:03:00
828000 -- (-3367.574) [-3363.351] (-3381.433) (-3375.768) * (-3388.524) [-3377.680] (-3361.992) (-3372.781) -- 0:02:59
829000 -- (-3364.589) (-3366.889) (-3392.668) [-3358.002] * (-3370.464) (-3372.901) (-3370.780) [-3363.516] -- 0:02:58
830000 -- [-3356.118] (-3390.924) (-3380.361) (-3371.696) * [-3368.616] (-3369.541) (-3370.699) (-3374.081) -- 0:02:56
Average standard deviation of split frequencies: 0.006638
831000 -- (-3371.771) (-3376.170) (-3376.644) [-3369.626] * (-3380.395) (-3365.220) [-3362.257] (-3378.691) -- 0:02:55
832000 -- (-3364.560) (-3360.303) [-3376.904] (-3360.531) * (-3372.622) [-3364.909] (-3363.318) (-3371.347) -- 0:02:54
833000 -- (-3370.348) (-3374.893) [-3366.794] (-3365.572) * (-3381.465) (-3392.368) [-3365.772] (-3372.123) -- 0:02:53
834000 -- (-3377.782) (-3366.388) [-3366.987] (-3379.259) * (-3388.125) [-3372.984] (-3371.650) (-3378.143) -- 0:02:52
835000 -- (-3374.235) [-3363.261] (-3374.624) (-3387.137) * [-3367.318] (-3389.596) (-3394.544) (-3368.510) -- 0:02:51
Average standard deviation of split frequencies: 0.006749
836000 -- (-3366.256) (-3373.788) [-3371.122] (-3369.705) * (-3372.921) (-3377.440) (-3368.135) [-3366.764] -- 0:02:50
837000 -- (-3380.349) (-3383.746) [-3371.474] (-3376.675) * (-3395.335) (-3368.397) (-3391.339) [-3371.116] -- 0:02:49
838000 -- (-3394.286) (-3371.203) [-3364.263] (-3395.932) * (-3369.425) (-3375.475) [-3366.239] (-3367.515) -- 0:02:48
839000 -- (-3391.158) [-3364.778] (-3358.240) (-3391.048) * (-3363.205) [-3373.654] (-3361.174) (-3365.657) -- 0:02:47
840000 -- (-3391.893) (-3379.520) [-3364.208] (-3373.669) * (-3364.537) [-3370.061] (-3377.143) (-3360.971) -- 0:02:46
Average standard deviation of split frequencies: 0.007069
841000 -- (-3381.998) (-3375.616) [-3364.254] (-3374.070) * (-3368.679) (-3380.271) [-3368.701] (-3372.403) -- 0:02:45
842000 -- (-3390.274) [-3360.414] (-3368.174) (-3371.528) * (-3378.495) (-3365.099) [-3363.539] (-3374.426) -- 0:02:44
843000 -- (-3384.614) (-3358.612) (-3374.001) [-3362.171] * (-3373.475) [-3371.658] (-3388.389) (-3384.510) -- 0:02:43
844000 -- (-3378.203) [-3351.793] (-3397.451) (-3379.796) * (-3376.545) [-3360.844] (-3370.907) (-3371.657) -- 0:02:42
845000 -- (-3388.972) [-3370.941] (-3378.004) (-3373.719) * (-3367.702) (-3370.042) [-3360.870] (-3374.431) -- 0:02:40
Average standard deviation of split frequencies: 0.007294
846000 -- (-3379.988) [-3366.705] (-3378.696) (-3369.797) * [-3364.971] (-3365.888) (-3383.911) (-3365.700) -- 0:02:39
847000 -- (-3380.878) (-3389.150) (-3376.628) [-3371.759] * (-3363.780) [-3362.386] (-3361.734) (-3358.143) -- 0:02:38
848000 -- (-3365.772) (-3402.143) (-3380.321) [-3360.946] * (-3366.595) (-3365.527) (-3380.310) [-3358.782] -- 0:02:37
849000 -- (-3369.422) (-3388.194) (-3376.346) [-3370.773] * (-3380.497) (-3353.900) (-3367.912) [-3369.374] -- 0:02:36
850000 -- (-3382.541) (-3377.554) [-3381.158] (-3366.538) * (-3390.436) [-3375.365] (-3362.371) (-3373.137) -- 0:02:35
Average standard deviation of split frequencies: 0.007087
851000 -- (-3372.607) [-3373.740] (-3374.139) (-3378.796) * (-3375.937) [-3352.323] (-3376.479) (-3373.742) -- 0:02:34
852000 -- (-3372.037) [-3366.855] (-3366.804) (-3363.470) * (-3363.889) [-3362.175] (-3383.849) (-3375.580) -- 0:02:33
853000 -- (-3364.747) [-3367.776] (-3383.844) (-3372.296) * (-3367.912) (-3360.731) (-3386.657) [-3358.573] -- 0:02:32
854000 -- (-3376.580) (-3360.871) (-3372.935) [-3365.261] * (-3366.868) [-3360.236] (-3377.555) (-3374.115) -- 0:02:31
855000 -- [-3372.131] (-3377.166) (-3376.958) (-3371.211) * [-3365.216] (-3375.070) (-3384.599) (-3368.283) -- 0:02:30
Average standard deviation of split frequencies: 0.007039
856000 -- (-3373.158) [-3362.231] (-3375.506) (-3362.791) * (-3377.529) (-3364.724) (-3383.153) [-3366.409] -- 0:02:29
857000 -- (-3364.362) (-3383.977) [-3365.092] (-3380.354) * (-3372.633) [-3367.012] (-3367.058) (-3365.978) -- 0:02:28
858000 -- [-3356.275] (-3389.862) (-3367.786) (-3379.624) * (-3379.038) [-3370.401] (-3382.792) (-3372.683) -- 0:02:27
859000 -- (-3358.628) (-3391.050) (-3375.663) [-3362.847] * (-3371.312) (-3381.079) (-3381.755) [-3370.575] -- 0:02:26
860000 -- (-3377.770) (-3373.010) (-3378.516) [-3366.028] * (-3372.534) [-3369.695] (-3369.177) (-3378.491) -- 0:02:25
Average standard deviation of split frequencies: 0.007069
861000 -- (-3366.194) (-3367.567) (-3371.786) [-3355.642] * [-3369.852] (-3386.243) (-3365.855) (-3365.455) -- 0:02:24
862000 -- (-3370.374) (-3377.896) (-3360.137) [-3358.000] * (-3386.249) (-3375.430) (-3375.159) [-3361.198] -- 0:02:22
863000 -- (-3362.992) [-3364.028] (-3374.015) (-3372.695) * (-3373.343) (-3373.383) [-3364.237] (-3356.490) -- 0:02:21
864000 -- (-3365.894) (-3358.207) (-3359.034) [-3369.459] * (-3371.289) (-3364.344) (-3391.005) [-3374.487] -- 0:02:20
865000 -- (-3368.901) (-3394.041) (-3370.463) [-3365.454] * (-3365.406) [-3368.004] (-3361.454) (-3363.668) -- 0:02:19
Average standard deviation of split frequencies: 0.007162
866000 -- (-3374.091) (-3383.386) [-3355.090] (-3362.166) * [-3370.880] (-3368.728) (-3362.980) (-3377.764) -- 0:02:18
867000 -- (-3387.277) (-3373.916) (-3378.997) [-3364.002] * (-3367.456) (-3376.724) (-3368.382) [-3383.226] -- 0:02:17
868000 -- (-3369.559) (-3370.480) (-3379.138) [-3357.086] * (-3370.498) (-3365.284) [-3368.335] (-3384.433) -- 0:02:16
869000 -- (-3369.200) [-3369.762] (-3383.754) (-3375.686) * (-3389.763) (-3376.658) [-3360.292] (-3373.156) -- 0:02:15
870000 -- (-3376.178) [-3355.272] (-3368.760) (-3361.570) * (-3379.784) (-3360.447) (-3368.449) [-3368.299] -- 0:02:14
Average standard deviation of split frequencies: 0.006768
871000 -- (-3379.583) [-3362.413] (-3373.925) (-3381.300) * (-3361.458) (-3370.533) (-3369.470) [-3365.497] -- 0:02:13
872000 -- (-3363.543) (-3380.488) [-3365.121] (-3373.215) * (-3372.589) (-3387.680) (-3363.696) [-3354.178] -- 0:02:12
873000 -- [-3363.986] (-3392.990) (-3366.218) (-3368.200) * (-3377.633) (-3378.239) (-3375.432) [-3354.990] -- 0:02:11
874000 -- (-3357.028) [-3354.928] (-3381.532) (-3366.673) * (-3372.327) (-3387.853) (-3382.344) [-3349.909] -- 0:02:10
875000 -- (-3367.126) [-3363.207] (-3376.143) (-3371.123) * [-3386.194] (-3376.708) (-3378.899) (-3389.430) -- 0:02:09
Average standard deviation of split frequencies: 0.006491
876000 -- [-3376.185] (-3377.988) (-3380.610) (-3375.690) * (-3368.614) (-3364.375) (-3388.321) [-3376.758] -- 0:02:08
877000 -- (-3361.612) (-3370.969) (-3383.254) [-3383.593] * [-3361.085] (-3374.007) (-3379.439) (-3369.675) -- 0:02:07
878000 -- (-3351.326) [-3373.344] (-3368.077) (-3378.525) * (-3361.630) [-3362.519] (-3367.181) (-3357.337) -- 0:02:06
879000 -- (-3374.199) (-3369.272) (-3373.510) [-3372.441] * (-3374.882) [-3363.434] (-3370.115) (-3366.226) -- 0:02:04
880000 -- [-3366.938] (-3368.021) (-3372.672) (-3378.954) * (-3380.514) (-3375.037) [-3367.555] (-3373.370) -- 0:02:03
Average standard deviation of split frequencies: 0.006574
881000 -- [-3362.873] (-3363.371) (-3364.466) (-3360.779) * (-3378.186) (-3386.216) [-3365.969] (-3368.214) -- 0:02:02
882000 -- [-3368.626] (-3380.796) (-3363.234) (-3367.558) * (-3383.688) (-3361.662) (-3358.824) [-3376.557] -- 0:02:01
883000 -- (-3371.416) (-3382.131) (-3361.899) [-3376.946] * [-3363.833] (-3370.192) (-3382.120) (-3367.178) -- 0:02:00
884000 -- (-3370.050) (-3380.820) (-3383.421) [-3369.660] * (-3383.379) [-3369.272] (-3374.558) (-3380.076) -- 0:01:59
885000 -- (-3371.541) [-3365.066] (-3378.281) (-3375.774) * (-3364.036) (-3363.261) (-3370.385) [-3361.843] -- 0:01:58
Average standard deviation of split frequencies: 0.006235
886000 -- (-3389.191) [-3366.420] (-3381.632) (-3378.550) * (-3363.477) (-3369.260) (-3375.331) [-3364.028] -- 0:01:57
887000 -- (-3382.791) (-3365.821) (-3378.684) [-3357.215] * (-3367.471) [-3364.784] (-3372.466) (-3369.489) -- 0:01:56
888000 -- (-3370.272) (-3361.907) [-3363.889] (-3364.720) * (-3376.044) (-3389.456) (-3363.541) [-3369.747] -- 0:01:55
889000 -- (-3381.443) (-3373.678) [-3377.058] (-3369.467) * [-3359.684] (-3379.187) (-3367.924) (-3367.596) -- 0:01:54
890000 -- (-3405.309) [-3368.253] (-3372.880) (-3370.655) * (-3372.490) (-3377.749) (-3359.438) [-3365.600] -- 0:01:53
Average standard deviation of split frequencies: 0.006517
891000 -- (-3378.520) (-3382.955) [-3370.327] (-3368.621) * (-3396.825) (-3379.964) (-3373.990) [-3361.324] -- 0:01:52
892000 -- (-3383.839) (-3361.700) (-3361.827) [-3372.119] * (-3374.127) [-3375.749] (-3366.267) (-3362.526) -- 0:01:51
893000 -- (-3376.393) [-3373.911] (-3370.376) (-3382.921) * (-3377.666) [-3371.968] (-3380.035) (-3356.223) -- 0:01:50
894000 -- (-3385.190) (-3370.101) [-3359.780] (-3382.720) * (-3375.804) (-3378.112) (-3367.099) [-3355.741] -- 0:01:49
895000 -- [-3366.550] (-3377.864) (-3365.325) (-3375.218) * (-3383.926) (-3374.888) (-3373.097) [-3376.866] -- 0:01:48
Average standard deviation of split frequencies: 0.006544
896000 -- (-3376.893) [-3375.198] (-3368.333) (-3358.476) * (-3371.664) (-3382.793) [-3367.561] (-3372.655) -- 0:01:47
897000 -- (-3378.093) (-3377.395) [-3360.078] (-3360.140) * (-3378.073) (-3380.121) [-3365.315] (-3374.317) -- 0:01:46
898000 -- (-3359.776) (-3385.119) (-3410.494) [-3367.691] * (-3368.305) [-3357.003] (-3383.696) (-3368.984) -- 0:01:45
899000 -- [-3365.169] (-3378.083) (-3381.794) (-3388.157) * (-3390.507) (-3375.159) [-3369.729] (-3368.766) -- 0:01:44
900000 -- [-3370.197] (-3378.754) (-3375.772) (-3373.929) * (-3380.584) [-3368.509] (-3366.962) (-3355.325) -- 0:01:43
Average standard deviation of split frequencies: 0.006592
901000 -- [-3361.234] (-3368.502) (-3388.290) (-3364.043) * (-3380.938) (-3370.341) (-3365.897) [-3362.458] -- 0:01:42
902000 -- (-3363.134) (-3377.754) (-3369.883) [-3366.326] * (-3392.356) (-3359.860) (-3371.235) [-3370.328] -- 0:01:41
903000 -- (-3361.236) (-3375.131) [-3365.028] (-3390.371) * (-3375.731) (-3363.181) [-3356.700] (-3374.653) -- 0:01:40
904000 -- (-3359.964) (-3376.769) [-3366.150] (-3379.668) * (-3365.928) [-3355.062] (-3372.081) (-3370.892) -- 0:01:39
905000 -- (-3365.260) [-3365.778] (-3368.991) (-3378.658) * (-3370.391) (-3365.047) [-3365.021] (-3370.820) -- 0:01:38
Average standard deviation of split frequencies: 0.006423
906000 -- (-3378.869) [-3356.200] (-3366.074) (-3375.883) * (-3378.474) (-3373.686) (-3358.159) [-3360.315] -- 0:01:37
907000 -- (-3373.471) [-3363.167] (-3380.374) (-3368.059) * (-3365.832) (-3382.069) (-3371.652) [-3374.372] -- 0:01:36
908000 -- (-3366.657) (-3368.940) (-3374.295) [-3361.355] * (-3361.274) [-3359.207] (-3366.856) (-3375.327) -- 0:01:35
909000 -- (-3375.647) [-3358.525] (-3359.174) (-3374.024) * (-3388.407) [-3363.782] (-3384.086) (-3365.760) -- 0:01:34
910000 -- (-3392.779) (-3363.136) [-3365.926] (-3380.989) * (-3371.382) (-3373.560) [-3375.464] (-3366.929) -- 0:01:33
Average standard deviation of split frequencies: 0.006050
911000 -- (-3387.295) (-3376.686) (-3374.291) [-3364.401] * (-3367.781) [-3369.417] (-3376.818) (-3364.207) -- 0:01:32
912000 -- (-3377.350) (-3375.546) (-3383.321) [-3353.361] * (-3381.565) [-3365.687] (-3380.581) (-3371.865) -- 0:01:31
913000 -- (-3372.562) (-3373.680) [-3370.794] (-3371.007) * (-3381.970) (-3363.223) (-3368.245) [-3362.739] -- 0:01:30
914000 -- (-3366.002) (-3373.524) [-3373.021] (-3384.058) * (-3365.124) [-3358.078] (-3385.723) (-3357.392) -- 0:01:29
915000 -- (-3366.696) [-3365.499] (-3363.014) (-3377.772) * (-3357.883) (-3362.378) (-3372.951) [-3364.157] -- 0:01:28
Average standard deviation of split frequencies: 0.005870
916000 -- (-3363.573) [-3360.592] (-3359.961) (-3379.317) * [-3368.441] (-3362.159) (-3389.177) (-3369.459) -- 0:01:27
917000 -- (-3374.921) (-3364.163) [-3354.241] (-3385.533) * (-3360.388) [-3361.682] (-3384.434) (-3396.542) -- 0:01:26
918000 -- (-3379.780) (-3364.268) (-3364.855) [-3387.911] * (-3369.674) [-3367.536] (-3372.118) (-3384.311) -- 0:01:25
919000 -- (-3353.772) (-3372.218) (-3366.907) [-3383.641] * [-3362.105] (-3355.093) (-3383.079) (-3386.654) -- 0:01:24
920000 -- [-3354.532] (-3376.373) (-3376.487) (-3385.020) * [-3360.714] (-3366.388) (-3384.431) (-3392.182) -- 0:01:23
Average standard deviation of split frequencies: 0.006000
921000 -- (-3357.898) [-3368.924] (-3373.802) (-3377.940) * (-3387.295) [-3364.085] (-3382.287) (-3377.742) -- 0:01:22
922000 -- (-3377.241) (-3370.713) [-3381.856] (-3384.882) * (-3370.816) [-3357.582] (-3374.155) (-3382.202) -- 0:01:21
923000 -- [-3366.284] (-3383.873) (-3364.312) (-3379.331) * (-3372.848) [-3365.582] (-3381.483) (-3368.049) -- 0:01:20
924000 -- [-3359.162] (-3373.200) (-3384.301) (-3383.417) * (-3388.041) (-3368.564) (-3369.427) [-3358.100] -- 0:01:19
925000 -- [-3362.169] (-3375.459) (-3369.864) (-3374.566) * (-3369.600) (-3367.203) (-3383.031) [-3369.139] -- 0:01:18
Average standard deviation of split frequencies: 0.005870
926000 -- [-3364.234] (-3360.456) (-3370.853) (-3369.889) * (-3372.926) [-3361.444] (-3386.462) (-3361.609) -- 0:01:17
927000 -- (-3394.051) [-3367.389] (-3375.595) (-3391.657) * (-3363.785) [-3369.007] (-3375.748) (-3363.841) -- 0:01:16
928000 -- (-3375.428) (-3384.452) [-3358.116] (-3380.226) * [-3362.536] (-3377.857) (-3389.172) (-3371.772) -- 0:01:15
929000 -- [-3374.586] (-3374.112) (-3362.742) (-3378.227) * (-3357.819) (-3378.820) [-3364.392] (-3373.830) -- 0:01:14
930000 -- (-3374.654) (-3377.722) (-3356.316) [-3358.011] * (-3382.719) [-3371.139] (-3385.735) (-3407.799) -- 0:01:13
Average standard deviation of split frequencies: 0.005873
931000 -- (-3352.678) [-3363.141] (-3366.544) (-3371.129) * (-3374.802) [-3374.559] (-3363.972) (-3391.238) -- 0:01:12
932000 -- (-3368.619) (-3400.499) [-3375.323] (-3380.232) * (-3365.766) [-3366.476] (-3380.940) (-3363.410) -- 0:01:11
933000 -- (-3373.071) [-3378.372] (-3381.921) (-3384.151) * (-3366.904) (-3368.552) (-3374.495) [-3369.802] -- 0:01:10
934000 -- [-3367.332] (-3393.199) (-3369.714) (-3375.927) * (-3380.873) [-3367.881] (-3364.418) (-3381.569) -- 0:01:08
935000 -- (-3363.482) (-3380.093) (-3390.859) [-3368.182] * (-3370.713) [-3370.980] (-3386.924) (-3377.179) -- 0:01:07
Average standard deviation of split frequencies: 0.005918
936000 -- (-3361.250) (-3370.039) (-3369.128) [-3372.916] * (-3379.251) [-3359.787] (-3374.759) (-3392.817) -- 0:01:06
937000 -- (-3371.423) (-3373.318) [-3365.628] (-3391.990) * [-3363.786] (-3382.579) (-3369.889) (-3368.690) -- 0:01:05
938000 -- (-3363.340) [-3366.773] (-3392.866) (-3376.472) * (-3373.391) [-3370.129] (-3371.397) (-3379.879) -- 0:01:04
939000 -- (-3366.057) (-3364.923) [-3361.770] (-3374.694) * (-3373.564) (-3373.620) [-3370.386] (-3389.194) -- 0:01:03
940000 -- (-3361.802) (-3372.977) [-3362.860] (-3370.971) * [-3358.165] (-3365.192) (-3366.968) (-3373.986) -- 0:01:02
Average standard deviation of split frequencies: 0.005779
941000 -- [-3359.077] (-3356.815) (-3381.294) (-3368.012) * (-3377.196) (-3371.008) [-3356.315] (-3372.373) -- 0:01:01
942000 -- [-3361.047] (-3367.650) (-3368.189) (-3378.560) * [-3372.561] (-3369.030) (-3380.008) (-3381.195) -- 0:01:00
943000 -- [-3355.996] (-3359.777) (-3367.047) (-3384.977) * (-3370.506) [-3366.765] (-3371.691) (-3366.878) -- 0:00:59
944000 -- (-3360.659) (-3367.819) [-3360.218] (-3396.958) * [-3366.793] (-3378.891) (-3381.685) (-3355.896) -- 0:00:58
945000 -- [-3363.120] (-3359.787) (-3373.886) (-3380.001) * (-3377.405) [-3360.144] (-3380.566) (-3377.463) -- 0:00:57
Average standard deviation of split frequencies: 0.005699
946000 -- (-3374.104) (-3375.536) [-3355.024] (-3376.539) * (-3381.044) (-3377.143) (-3382.829) [-3374.074] -- 0:00:56
947000 -- [-3362.746] (-3363.537) (-3377.476) (-3376.144) * (-3367.365) (-3365.641) [-3359.871] (-3364.682) -- 0:00:55
948000 -- [-3372.367] (-3364.106) (-3389.829) (-3374.626) * (-3379.820) (-3371.361) [-3371.898] (-3385.931) -- 0:00:54
949000 -- (-3384.116) [-3363.917] (-3364.952) (-3369.499) * (-3376.466) (-3366.552) [-3367.901] (-3374.284) -- 0:00:53
950000 -- (-3374.309) (-3368.406) [-3363.580] (-3364.005) * (-3371.693) (-3366.165) [-3360.695] (-3399.972) -- 0:00:52
Average standard deviation of split frequencies: 0.005548
951000 -- [-3381.030] (-3381.553) (-3375.988) (-3370.131) * [-3364.473] (-3377.915) (-3360.932) (-3406.715) -- 0:00:51
952000 -- [-3372.093] (-3367.562) (-3364.356) (-3385.936) * (-3373.051) (-3374.201) [-3363.403] (-3390.472) -- 0:00:50
953000 -- (-3364.029) (-3373.910) [-3359.496] (-3376.214) * (-3381.246) (-3383.552) [-3369.091] (-3365.894) -- 0:00:49
954000 -- [-3364.656] (-3370.701) (-3361.590) (-3384.574) * [-3361.306] (-3371.647) (-3373.010) (-3371.897) -- 0:00:48
955000 -- (-3367.661) (-3383.640) (-3364.799) [-3361.849] * (-3390.983) (-3368.437) [-3369.793] (-3395.952) -- 0:00:47
Average standard deviation of split frequencies: 0.005640
956000 -- (-3372.273) (-3371.849) [-3360.205] (-3366.016) * [-3374.258] (-3358.716) (-3368.647) (-3392.886) -- 0:00:46
957000 -- (-3369.937) [-3367.006] (-3372.383) (-3378.423) * (-3374.870) [-3372.684] (-3369.422) (-3360.623) -- 0:00:45
958000 -- [-3357.246] (-3367.833) (-3383.440) (-3374.425) * (-3375.964) (-3373.870) [-3365.175] (-3377.070) -- 0:00:44
959000 -- (-3380.067) [-3378.113] (-3380.405) (-3380.799) * (-3370.478) (-3373.505) (-3382.996) [-3356.988] -- 0:00:43
960000 -- (-3369.230) [-3370.133] (-3375.413) (-3394.461) * [-3363.112] (-3374.391) (-3367.682) (-3366.009) -- 0:00:42
Average standard deviation of split frequencies: 0.005674
961000 -- [-3366.501] (-3372.273) (-3374.054) (-3362.979) * (-3362.518) [-3368.187] (-3369.674) (-3364.566) -- 0:00:41
962000 -- (-3366.055) (-3374.046) (-3374.055) [-3364.886] * (-3366.452) (-3393.168) (-3375.302) [-3369.764] -- 0:00:40
963000 -- (-3385.850) (-3370.997) [-3366.311] (-3385.510) * (-3379.014) (-3392.300) [-3360.609] (-3359.350) -- 0:00:39
964000 -- [-3376.290] (-3382.808) (-3369.992) (-3364.574) * (-3364.665) (-3379.334) (-3372.481) [-3364.524] -- 0:00:38
965000 -- (-3376.009) (-3383.094) (-3362.084) [-3368.245] * (-3361.508) (-3377.682) (-3387.859) [-3371.309] -- 0:00:36
Average standard deviation of split frequencies: 0.005719
966000 -- (-3376.179) (-3367.200) (-3384.568) [-3362.827] * (-3376.109) [-3372.637] (-3396.426) (-3369.957) -- 0:00:35
967000 -- (-3368.051) (-3382.710) [-3362.848] (-3376.762) * (-3365.533) [-3367.321] (-3387.362) (-3367.175) -- 0:00:34
968000 -- (-3371.480) [-3354.717] (-3376.621) (-3360.671) * (-3365.808) [-3359.927] (-3378.607) (-3368.950) -- 0:00:33
969000 -- (-3367.261) (-3373.481) (-3383.713) [-3351.377] * (-3384.483) [-3364.804] (-3377.674) (-3371.251) -- 0:00:32
970000 -- (-3372.087) [-3369.460] (-3373.585) (-3358.185) * (-3373.485) (-3375.373) [-3356.699] (-3375.120) -- 0:00:31
Average standard deviation of split frequencies: 0.005448
971000 -- (-3395.887) (-3363.398) (-3385.747) [-3359.534] * (-3368.762) (-3379.692) (-3370.169) [-3371.148] -- 0:00:30
972000 -- (-3390.416) (-3366.640) [-3369.962] (-3370.287) * (-3375.127) [-3377.372] (-3375.259) (-3370.919) -- 0:00:29
973000 -- [-3364.556] (-3372.326) (-3364.814) (-3361.948) * (-3378.911) [-3360.457] (-3368.090) (-3365.830) -- 0:00:28
974000 -- [-3368.433] (-3367.047) (-3387.347) (-3375.427) * (-3378.472) [-3349.873] (-3363.403) (-3369.090) -- 0:00:27
975000 -- [-3360.251] (-3370.964) (-3374.439) (-3389.055) * (-3371.204) (-3371.741) (-3377.115) [-3375.107] -- 0:00:26
Average standard deviation of split frequencies: 0.005464
976000 -- (-3358.612) [-3369.916] (-3366.740) (-3387.428) * [-3359.883] (-3368.667) (-3383.814) (-3368.390) -- 0:00:25
977000 -- (-3368.425) (-3369.710) [-3363.716] (-3383.855) * (-3365.467) [-3368.051] (-3359.513) (-3365.556) -- 0:00:24
978000 -- [-3364.418] (-3380.446) (-3363.704) (-3381.637) * (-3369.421) (-3379.341) [-3361.337] (-3372.105) -- 0:00:23
979000 -- (-3370.122) [-3365.968] (-3370.288) (-3379.449) * (-3377.077) (-3383.953) (-3374.455) [-3368.709] -- 0:00:22
980000 -- (-3375.471) (-3370.709) [-3365.414] (-3378.646) * (-3381.446) (-3375.179) [-3366.386] (-3356.036) -- 0:00:21
Average standard deviation of split frequencies: 0.005423
981000 -- [-3369.817] (-3358.537) (-3374.129) (-3372.256) * (-3378.086) [-3353.737] (-3371.716) (-3372.091) -- 0:00:20
982000 -- (-3372.106) (-3377.780) (-3370.162) [-3366.544] * (-3388.217) (-3380.807) [-3365.856] (-3388.437) -- 0:00:19
983000 -- (-3375.519) [-3375.930] (-3369.424) (-3373.464) * (-3372.228) [-3364.553] (-3364.024) (-3367.631) -- 0:00:18
984000 -- (-3388.876) (-3375.833) [-3363.053] (-3389.578) * (-3357.636) [-3368.323] (-3392.636) (-3372.538) -- 0:00:16
985000 -- (-3373.991) [-3357.852] (-3371.055) (-3376.145) * (-3379.901) [-3360.871] (-3371.252) (-3373.109) -- 0:00:15
Average standard deviation of split frequencies: 0.005229
986000 -- (-3368.643) (-3376.257) (-3377.006) [-3358.851] * (-3381.527) (-3385.622) [-3371.898] (-3365.532) -- 0:00:14
987000 -- (-3387.057) [-3369.534] (-3370.478) (-3364.901) * (-3372.259) (-3382.669) [-3368.580] (-3380.159) -- 0:00:13
988000 -- [-3370.933] (-3369.655) (-3368.775) (-3379.492) * (-3373.385) (-3370.905) [-3374.831] (-3372.186) -- 0:00:12
989000 -- (-3370.435) [-3364.275] (-3383.931) (-3378.251) * (-3360.951) (-3373.160) [-3362.478] (-3373.707) -- 0:00:11
990000 -- (-3381.137) (-3369.668) (-3376.750) [-3354.071] * (-3366.952) [-3367.600] (-3381.685) (-3359.089) -- 0:00:10
Average standard deviation of split frequencies: 0.005004
991000 -- (-3374.519) (-3375.428) (-3379.462) [-3368.887] * [-3363.402] (-3369.207) (-3370.688) (-3363.592) -- 0:00:09
992000 -- (-3373.570) (-3372.041) [-3366.831] (-3372.701) * (-3374.717) (-3373.462) (-3374.752) [-3361.223] -- 0:00:08
993000 -- (-3369.602) (-3374.007) (-3382.773) [-3355.763] * [-3368.541] (-3366.915) (-3378.158) (-3375.162) -- 0:00:07
994000 -- (-3378.394) (-3360.918) (-3379.574) [-3366.222] * [-3351.029] (-3372.377) (-3375.766) (-3362.378) -- 0:00:06
995000 -- (-3385.961) (-3358.045) [-3367.859] (-3400.307) * (-3378.392) [-3371.624] (-3382.528) (-3386.277) -- 0:00:05
Average standard deviation of split frequencies: 0.005063
996000 -- [-3378.089] (-3365.263) (-3367.246) (-3381.461) * [-3354.282] (-3380.069) (-3364.910) (-3377.356) -- 0:00:04
997000 -- [-3364.733] (-3365.098) (-3366.685) (-3375.411) * [-3366.408] (-3377.275) (-3363.547) (-3378.324) -- 0:00:03
998000 -- [-3375.640] (-3378.979) (-3368.790) (-3383.995) * (-3384.057) (-3373.045) [-3366.321] (-3368.929) -- 0:00:02
999000 -- (-3366.701) (-3369.516) (-3382.623) [-3369.951] * (-3370.114) (-3369.439) (-3375.845) [-3369.356] -- 0:00:01
1000000 -- (-3366.108) (-3372.137) [-3375.589] (-3372.093) * (-3385.378) (-3361.462) (-3370.515) [-3358.408] -- 0:00:00
Average standard deviation of split frequencies: 0.005064
Analysis completed in 17 mins 45 seconds
Analysis used 1063.75 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -3344.59
Likelihood of best state for "cold" chain of run 2 was -3345.05
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
45.5 % ( 38 %) Dirichlet(Revmat{all})
66.1 % ( 50 %) Slider(Revmat{all})
20.4 % ( 27 %) Dirichlet(Pi{all})
25.4 % ( 31 %) Slider(Pi{all})
68.7 % ( 42 %) Multiplier(Alpha{1,2})
52.7 % ( 38 %) Multiplier(Alpha{3})
43.4 % ( 30 %) Slider(Pinvar{all})
50.5 % ( 49 %) ExtSPR(Tau{all},V{all})
42.5 % ( 51 %) ExtTBR(Tau{all},V{all})
53.6 % ( 52 %) NNI(Tau{all},V{all})
46.0 % ( 41 %) ParsSPR(Tau{all},V{all})
27.1 % ( 30 %) Multiplier(V{all})
64.8 % ( 64 %) Nodeslider(V{all})
26.0 % ( 26 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
45.7 % ( 26 %) Dirichlet(Revmat{all})
66.7 % ( 60 %) Slider(Revmat{all})
21.4 % ( 26 %) Dirichlet(Pi{all})
25.4 % ( 24 %) Slider(Pi{all})
68.6 % ( 52 %) Multiplier(Alpha{1,2})
53.0 % ( 21 %) Multiplier(Alpha{3})
42.6 % ( 22 %) Slider(Pinvar{all})
50.7 % ( 53 %) ExtSPR(Tau{all},V{all})
43.2 % ( 46 %) ExtTBR(Tau{all},V{all})
53.5 % ( 54 %) NNI(Tau{all},V{all})
46.0 % ( 38 %) ParsSPR(Tau{all},V{all})
27.1 % ( 21 %) Multiplier(V{all})
64.8 % ( 66 %) Nodeslider(V{all})
25.7 % ( 30 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.53 0.22 0.08
2 | 165933 0.56 0.26
3 | 167003 166763 0.58
4 | 166686 166365 167250
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.53 0.22 0.08
2 | 166778 0.56 0.26
3 | 167430 166101 0.59
4 | 166505 166856 166330
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -3360.81
| * 1 |
| 22 |
| 2 1 |
| 2 2 1 2 2 1 |
| 1 1 1 2 2 2 1 1 2* 2 2 * 21 |
|1 1 2 1 1 * 1 121 1 1 12 2 2 |
| 22 1 112 2 221 2 2 22 12 22 21 2 2 2|
| 2 1 2 2 1 21 22 1 * 1 2 |
| 2 1 1 11 2 1 2 12 * 1 1 2 |
| 2 1 1 2 2 1 1|
|2 1 1 11 1 2 1 1 |
| 1 12 |
| 1 |
| |
| 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -3370.77
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -3353.76 -3381.67
2 -3353.22 -3381.76
--------------------------------------
TOTAL -3353.46 -3381.72
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.125966 0.000228 0.096178 0.154020 0.124839 1251.47 1333.43 1.000
r(A<->C){all} 0.073817 0.000686 0.027303 0.127495 0.071447 711.27 791.83 1.000
r(A<->G){all} 0.149888 0.001396 0.080895 0.222200 0.146406 785.17 806.37 1.000
r(A<->T){all} 0.039014 0.000238 0.012295 0.069225 0.037261 965.54 990.59 1.001
r(C<->G){all} 0.012156 0.000127 0.000006 0.034829 0.009062 665.59 700.55 1.000
r(C<->T){all} 0.698561 0.002239 0.602661 0.786275 0.701504 473.74 631.36 1.000
r(G<->T){all} 0.026564 0.000146 0.006474 0.050202 0.024738 956.51 995.26 1.000
pi(A){all} 0.256177 0.000104 0.236184 0.276509 0.256190 1046.05 1163.50 1.001
pi(C){all} 0.201485 0.000084 0.184127 0.219935 0.201337 1114.94 1137.98 1.000
pi(G){all} 0.217413 0.000092 0.198128 0.235541 0.217072 1008.66 1164.35 1.000
pi(T){all} 0.324926 0.000118 0.303402 0.345888 0.324931 1128.93 1149.91 1.000
alpha{1,2} 0.057968 0.001435 0.000041 0.124628 0.054835 827.51 841.18 1.000
alpha{3} 3.700031 2.233710 1.193617 6.577905 3.450016 1433.85 1467.43 1.000
pinvar{all} 0.730191 0.001345 0.659978 0.806316 0.733019 1080.81 1127.32 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C321
2 -- C66
3 -- C523
4 -- C287
5 -- C327
6 -- C72
7 -- C8
8 -- C240
9 -- C78
10 -- C591
11 -- C242
12 -- C325
13 -- C316
14 -- C559
15 -- C50
16 -- C370
17 -- C391
18 -- C112
19 -- C385
20 -- C369
21 -- C463
22 -- C595
23 -- C493
24 -- C607
25 -- C388
26 -- C130
27 -- C23
28 -- C263
29 -- C108
30 -- C392
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------------------------
1 -- .*****************************
2 -- .*............................
3 -- ..*...........................
4 -- ...*..........................
5 -- ....*.........................
6 -- .....*........................
7 -- ......*.......................
8 -- .......*......................
9 -- ........*.....................
10 -- .........*....................
11 -- ..........*...................
12 -- ...........*..................
13 -- ............*.................
14 -- .............*................
15 -- ..............*...............
16 -- ...............*..............
17 -- ................*.............
18 -- .................*............
19 -- ..................*...........
20 -- ...................*..........
21 -- ....................*.........
22 -- .....................*........
23 -- ......................*.......
24 -- .......................*......
25 -- ........................*.....
26 -- .........................*....
27 -- ..........................*...
28 -- ...........................*..
29 -- ............................*.
30 -- .............................*
31 -- .......**.....................
32 -- ..**.....*...*.**..****.*.*.*.
33 -- .***.******..*****************
34 -- .................*.....*......
35 -- ..................*..........*
36 -- .***.**..**..*.***************
37 -- ..**.....*...*.**..*.**.*.*.*.
38 -- .***.**..*...*.**.*****.******
39 -- ..**.....*...*.**..****.*****.
40 -- .*...*........................
41 -- .***.**..**..*****************
42 -- .***.**..*...*.***************
43 -- .***.*...*...*.**.*****.******
44 -- .*...*............*..........*
45 -- .........................*.*..
46 -- ..**.....*...*.**..****.*.***.
47 -- ..**.....*...*.**..****.***.*.
48 -- ..**.....*...*.**.*****.******
49 -- .***.*************************
50 -- .***.*******.*****************
51 -- ....*.......*.................
52 -- ...........**.................
53 -- ....*......**.................
54 -- .**********.******************
55 -- .***.******.******************
56 -- .**********..*****************
57 -- .***********.*****************
58 -- ..........*......*.....*......
59 -- ....*......*..................
60 -- .*...**.......................
61 -- ..**..*..*...*.**..****.*****.
62 -- .*...**...........*..........*
------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 2986 0.994670 0.003769 0.992005 0.997335 2
33 2981 0.993005 0.002355 0.991339 0.994670 2
34 2970 0.989340 0.001884 0.988008 0.990673 2
35 2931 0.976349 0.001413 0.975350 0.977348 2
36 2896 0.964690 0.000942 0.964024 0.965356 2
37 2891 0.963025 0.006124 0.958694 0.967355 2
38 2852 0.950033 0.002827 0.948035 0.952032 2
39 2841 0.946369 0.000471 0.946036 0.946702 2
40 2726 0.908061 0.004711 0.904730 0.911392 2
41 2484 0.827448 0.003769 0.824783 0.830113 2
42 2168 0.722185 0.009422 0.715523 0.728847 2
43 1644 0.547635 0.001884 0.546302 0.548967 2
44 1233 0.410726 0.006124 0.406396 0.415057 2
45 1036 0.345103 0.010364 0.337775 0.352432 2
46 959 0.319454 0.006124 0.315123 0.323784 2
47 907 0.302132 0.014604 0.291805 0.312458 2
48 647 0.215523 0.003298 0.213191 0.217855 2
49 627 0.208861 0.010835 0.201199 0.216522 2
50 611 0.203531 0.001413 0.202532 0.204530 2
51 611 0.203531 0.008009 0.197868 0.209194 2
52 608 0.202532 0.004711 0.199201 0.205863 2
53 604 0.201199 0.006595 0.196536 0.205863 2
54 600 0.199867 0.013191 0.190540 0.209194 2
55 591 0.196869 0.003298 0.194537 0.199201 2
56 589 0.196203 0.018373 0.183211 0.209194 2
57 580 0.193205 0.000942 0.192538 0.193871 2
58 578 0.192538 0.004711 0.189207 0.195869 2
59 561 0.186875 0.008009 0.181213 0.192538 2
60 525 0.174883 0.000471 0.174550 0.175217 2
61 430 0.143238 0.000942 0.142572 0.143904 2
62 389 0.129580 0.000471 0.129247 0.129913 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.000601 0.000000 0.000000 0.001829 0.000408 1.001 2
length{all}[2] 0.003776 0.000003 0.000982 0.006732 0.003580 1.000 2
length{all}[3] 0.001183 0.000001 0.000007 0.002805 0.001000 1.000 2
length{all}[4] 0.002449 0.000002 0.000453 0.004919 0.002237 1.000 2
length{all}[5] 0.000571 0.000000 0.000001 0.001703 0.000395 1.000 2
length{all}[6] 0.003029 0.000002 0.000761 0.005925 0.002829 1.000 2
length{all}[7] 0.031678 0.000037 0.020214 0.043164 0.031339 1.001 2
length{all}[8] 0.004926 0.000003 0.001689 0.008558 0.004676 1.000 2
length{all}[9] 0.000597 0.000000 0.000000 0.001768 0.000407 1.001 2
length{all}[10] 0.000585 0.000000 0.000000 0.001744 0.000400 1.000 2
length{all}[11] 0.007778 0.000006 0.003289 0.012619 0.007499 1.002 2
length{all}[12] 0.000597 0.000000 0.000000 0.001820 0.000411 1.000 2
length{all}[13] 0.001166 0.000001 0.000023 0.002830 0.000964 1.001 2
length{all}[14] 0.002429 0.000002 0.000430 0.004913 0.002206 1.001 2
length{all}[15] 0.001266 0.000001 0.000005 0.002988 0.001057 1.000 2
length{all}[16] 0.001160 0.000001 0.000005 0.002821 0.000951 1.000 2
length{all}[17] 0.003049 0.000002 0.000755 0.005851 0.002880 1.001 2
length{all}[18] 0.000607 0.000000 0.000000 0.001819 0.000421 1.001 2
length{all}[19] 0.004402 0.000003 0.001433 0.007865 0.004188 1.003 2
length{all}[20] 0.000603 0.000000 0.000000 0.001803 0.000420 1.000 2
length{all}[21] 0.000637 0.000000 0.000001 0.001902 0.000441 1.000 2
length{all}[22] 0.001197 0.000001 0.000061 0.002906 0.000993 1.000 2
length{all}[23] 0.000600 0.000000 0.000000 0.001785 0.000413 1.001 2
length{all}[24] 0.000588 0.000000 0.000000 0.001763 0.000411 1.000 2
length{all}[25] 0.001210 0.000001 0.000002 0.002860 0.001034 1.000 2
length{all}[26] 0.001802 0.000001 0.000174 0.003896 0.001589 1.001 2
length{all}[27] 0.000592 0.000000 0.000000 0.001774 0.000410 1.000 2
length{all}[28] 0.002465 0.000002 0.000438 0.004914 0.002240 1.000 2
length{all}[29] 0.000586 0.000000 0.000000 0.001774 0.000404 1.001 2
length{all}[30] 0.004426 0.000003 0.001294 0.007813 0.004163 1.000 2
length{all}[31] 0.002535 0.000002 0.000368 0.004998 0.002299 1.000 2
length{all}[32] 0.002358 0.000002 0.000306 0.004772 0.002182 1.000 2
length{all}[33] 0.001872 0.000001 0.000099 0.004044 0.001679 1.000 2
length{all}[34] 0.002096 0.000002 0.000154 0.004659 0.001820 1.000 2
length{all}[35] 0.001809 0.000001 0.000082 0.004022 0.001583 1.000 2
length{all}[36] 0.003472 0.000003 0.000638 0.006904 0.003248 1.000 2
length{all}[37] 0.001211 0.000001 0.000056 0.002897 0.001006 1.000 2
length{all}[38] 0.003793 0.000003 0.000776 0.007369 0.003544 1.001 2
length{all}[39] 0.004444 0.000003 0.001196 0.008091 0.004286 1.000 2
length{all}[40] 0.002792 0.000002 0.000027 0.005645 0.002592 1.000 2
length{all}[41] 0.001175 0.000001 0.000001 0.002926 0.000958 1.000 2
length{all}[42] 0.001325 0.000001 0.000020 0.003264 0.001102 1.000 2
length{all}[43] 0.001943 0.000002 0.000002 0.004712 0.001633 0.999 2
length{all}[44] 0.001165 0.000001 0.000001 0.003047 0.000924 0.999 2
length{all}[45] 0.000670 0.000000 0.000001 0.002007 0.000462 0.999 2
length{all}[46] 0.000636 0.000000 0.000000 0.001905 0.000433 0.999 2
length{all}[47] 0.000682 0.000001 0.000001 0.002147 0.000448 1.001 2
length{all}[48] 0.001277 0.000002 0.000001 0.003970 0.000909 0.998 2
length{all}[49] 0.000592 0.000000 0.000000 0.001731 0.000410 0.998 2
length{all}[50] 0.000577 0.000000 0.000000 0.001655 0.000397 0.998 2
length{all}[51] 0.000598 0.000000 0.000001 0.001944 0.000391 0.999 2
length{all}[52] 0.000585 0.000000 0.000000 0.001783 0.000394 0.999 2
length{all}[53] 0.000556 0.000000 0.000001 0.001697 0.000380 1.001 2
length{all}[54] 0.000630 0.000000 0.000001 0.001896 0.000415 0.999 2
length{all}[55] 0.000608 0.000000 0.000000 0.001765 0.000432 0.999 2
length{all}[56] 0.000593 0.000000 0.000000 0.001795 0.000368 0.998 2
length{all}[57] 0.000595 0.000000 0.000002 0.001849 0.000400 1.001 2
length{all}[58] 0.002087 0.000003 0.000001 0.005232 0.001711 0.998 2
length{all}[59] 0.000571 0.000000 0.000001 0.001781 0.000393 0.998 2
length{all}[60] 0.002144 0.000002 0.000004 0.004668 0.001937 0.998 2
length{all}[61] 0.002092 0.000003 0.000009 0.005409 0.001709 0.999 2
length{all}[62] 0.000912 0.000001 0.000002 0.002422 0.000673 0.998 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.005064
Maximum standard deviation of split frequencies = 0.018373
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.003
Clade credibility values:
/--------------------------------------------------------------------- C321 (1)
|
|--------------------------------------------------------------------- C327 (5)
|
|--------------------------------------------------------------------- C325 (12)
|
|--------------------------------------------------------------------- C316 (13)
|
| /------- C66 (2)
| /---------91---------+
| | \------- C72 (6)
| |
| | /------- C523 (3)
| | |
| | |------- C287 (4)
| | |
| | |------- C591 (10)
| | |
| | |------- C559 (14)
| | |
| | |------- C370 (16)
| | |
| | |------- C391 (17)
| | /--96--+
| | | |------- C369 (20)
| | | |
| /--55-+ | |------- C595 (22)
+ | | | |
| | | | |------- C493 (23)
| | | | |
| | | /--99--+ |------- C388 (25)
| | | | | |
| | | | | |------- C23 (27)
| | | | | |
| | | | | \------- C108 (29)
| | |--95--+ |
| /--95--+ | | \-------------- C463 (21)
| | | | |
| | | | |--------------------- C130 (26)
| | | | |
| | | | \--------------------- C263 (28)
| | | |
| | | | /------- C385 (19)
| /--72--+ | \---------98---------+
| | | | \------- C392 (30)
| | | |
| | | \---------------------------------- C8 (7)
| | |
| /--96--+ | /------- C112 (18)
| | | \----------------99---------------+
| | | \------- C607 (24)
| /--83--+ |
| | | \------------------------------------------------ C242 (11)
| | |
\--99--+ \------------------------------------------------------- C50 (15)
|
| /------- C240 (8)
\--------------------------100-------------------------+
\------- C78 (9)
Phylogram (based on average branch lengths):
/- C321 (1)
|
|- C327 (5)
|
|- C325 (12)
|
|-- C316 (13)
|
| /------- C66 (2)
| /---+
| | \----- C72 (6)
| |
| | /- C523 (3)
| | |
| | |---- C287 (4)
| | |
| | | C591 (10)
| | |
| | |---- C559 (14)
| | |
| | |- C370 (16)
| | |
| | |----- C391 (17)
| | /-+
| | | | C369 (20)
| | | |
| /--+ | |- C595 (22)
+ | | | |
| | | | | C493 (23)
| | | | |
| | | /---+ |-- C388 (25)
| | | | | |
| | | | | | C23 (27)
| | | | | |
| | | | | \ C108 (29)
| | |------+ |
| /-----+ | | \- C463 (21)
| | | | |
| | | | |--- C130 (26)
| | | | |
| | | | \---- C263 (28)
| | | |
| | | | /------- C385 (19)
| /-+ | \--+
| | | | \------- C392 (30)
| | | |
| | | \------------------------------------------------------ C8 (7)
| | |
| /----+ | /- C112 (18)
| | | \--+
| | | \- C607 (24)
| /-+ |
| | | \------------- C242 (11)
| | |
\--+ \- C50 (15)
|
| /-------- C240 (8)
\---+
\- C78 (9)
|-------| 0.005 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Thu Nov 17 16:36:39 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_nsp10_VIPR_ALG4_672096710_15373_17163_1_2012_02_China_Swine_PEDV.result--
-- Starting log on Fri Nov 18 05:39:06 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/LZW_nsp10_VIPR_ALG4_672096710_15373_17163_1_2012_02_China_Swine_PEDV.result/original_alignment/codeml,LZW_nsp10_VIPR_ALG4_672096710_15373_17163_1_2012_02_China_Swine_PEDV.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C559 1791 sites
reading seq# 2 C370 1791 sites
reading seq# 3 C50 1791 sites
reading seq# 4 C242 1791 sites
reading seq# 5 C112 1791 sites
reading seq# 6 C391 1791 sites
reading seq# 7 C385 1791 sites
reading seq# 8 C316 1791 sites
reading seq# 9 C263 1791 sites
reading seq#10 C369 1791 sites
reading seq#11 C66 1791 sites
reading seq#12 C321 1791 sites
reading seq#13 C523 1791 sites
reading seq#14 C463 1791 sites
reading seq#15 C595 1791 sites
reading seq#16 C327 1791 sites
reading seq#17 C287 1791 sites
reading seq#18 C72 1791 sites
reading seq#19 C607 1791 sites
reading seq#20 C493 1791 sites
reading seq#21 C240 1791 sites
reading seq#22 C8 1791 sites
reading seq#23 C130 1791 sites
reading seq#24 C23 1791 sites
reading seq#25 C388 1791 sites
reading seq#26 C591 1791 sites
reading seq#27 C78 1791 sites
reading seq#28 C392 1791 sites
reading seq#29 C108 1791 sites
reading seq#30 C325 1791 sitesns = 30 ls = 1791
Reading sequences, sequential format..
Reading seq # 1: C559
Reading seq # 2: C370
Reading seq # 3: C50
Reading seq # 4: C242
Reading seq # 5: C112
Reading seq # 6: C391
Reading seq # 7: C385
Reading seq # 8: C316
Reading seq # 9: C263
Reading seq #10: C369
Reading seq #11: C66
Reading seq #12: C321
Reading seq #13: C523
Reading seq #14: C463
Reading seq #15: C595
Reading seq #16: C327
Reading seq #17: C287
Reading seq #18: C72
Reading seq #19: C607
Reading seq #20: C493
Reading seq #21: C240
Reading seq #22: C8
Reading seq #23: C130
Reading seq #24: C23
Reading seq #25: C388
Reading seq #26: C591
Reading seq #27: C78
Reading seq #28: C392
Reading seq #29: C108
Reading seq #30: C325
Sequences read..
Counting site patterns.. 0:00
Compressing, 161 patterns at 597 / 597 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 161 patterns at 597 / 597 sites (100.0%), 0:00
Counting codons..
3480 bytes for distance
157136 bytes for conP
14168 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(12, 16, 30, 8, (((((((11, 18), (((13, 17, 26, 1, 2, 6, 10, 15, 20, 25, 24, 29), 14), 23, 9), (7, 28)), 22), (5, 19)), 4), 3), (21, 27))); MP score: 140
1099952 bytes for conP, adjusted
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
37
0.078573 0.105760 0.039677 0.075649 0.040521 0.040826 0.049478 0.048905 0.054916 0.018539 0.071002 0.060297 0.041327 0.050778 0.015905 0.061948 0.031325 0.033526 0.096004 0.045686 0.091355 0.046123 0.014067 0.103379 0.023242 0.041064 0.087704 0.048911 0.072022 0.010245 0.023561 0.025201 0.045784 0.088622 0.033983 0.094727 0.027214 0.031207 0.063356 0.086980 0.031519 0.074342 0.066296 0.300000 0.665158 0.252171
ntime & nrate & np: 43 2 46
Bounds (np=46):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 13.549251
np = 46
lnL0 = -4234.584834
Iterating by ming2
Initial: fx= 4234.584834
x= 0.07857 0.10576 0.03968 0.07565 0.04052 0.04083 0.04948 0.04891 0.05492 0.01854 0.07100 0.06030 0.04133 0.05078 0.01590 0.06195 0.03133 0.03353 0.09600 0.04569 0.09136 0.04612 0.01407 0.10338 0.02324 0.04106 0.08770 0.04891 0.07202 0.01024 0.02356 0.02520 0.04578 0.08862 0.03398 0.09473 0.02721 0.03121 0.06336 0.08698 0.03152 0.07434 0.06630 0.30000 0.66516 0.25217
1 h-m-p 0.0000 0.0000 2642.2033 ++ 4008.914147 m 0.0000 51 | 1/46
2 h-m-p 0.0000 0.0000 7676.9151 ++ 3900.770137 m 0.0000 100 | 2/46
3 h-m-p 0.0000 0.0000 8287.7149 ++ 3863.270120 m 0.0000 149 | 3/46
4 h-m-p 0.0000 0.0000 23519.0687 ++ 3831.257798 m 0.0000 198 | 4/46
5 h-m-p 0.0000 0.0000 16400.4070 ++ 3774.996225 m 0.0000 247 | 4/46
6 h-m-p 0.0000 0.0000 13901.6147 ++ 3771.376613 m 0.0000 296 | 5/46
7 h-m-p 0.0000 0.0000 5825.0103 ++ 3708.616692 m 0.0000 345 | 6/46
8 h-m-p 0.0000 0.0000 12722.3953 ++ 3660.234688 m 0.0000 394 | 6/46
9 h-m-p 0.0000 0.0000 54292.8162 ++ 3607.270299 m 0.0000 443 | 7/46
10 h-m-p 0.0000 0.0000 14407.4836 ++ 3579.047693 m 0.0000 492 | 8/46
11 h-m-p 0.0000 0.0000 7257.9140 ++ 3552.297856 m 0.0000 541 | 9/46
12 h-m-p 0.0000 0.0000 16701.2794 ++ 3519.045751 m 0.0000 590 | 10/46
13 h-m-p 0.0000 0.0000 15593.0478 ++ 3495.212162 m 0.0000 639 | 11/46
14 h-m-p 0.0000 0.0000 23341.5305 ++ 3474.923204 m 0.0000 688 | 12/46
15 h-m-p 0.0000 0.0000 5402.9785 ++ 3440.310951 m 0.0000 737 | 12/46
16 h-m-p 0.0000 0.0000 27614.2977 +CYCCC 3417.127040 4 0.0000 794 | 12/46
17 h-m-p 0.0000 0.0000 2208.1196 +CCC 3411.942862 2 0.0000 848 | 12/46
18 h-m-p 0.0000 0.0000 974.4027 ++ 3409.323703 m 0.0000 897 | 12/46
19 h-m-p 0.0000 0.0000 1073.8961
h-m-p: 0.00000000e+00 0.00000000e+00 1.07389606e+03 3409.323703
.. | 12/46
20 h-m-p 0.0000 0.0000 9563.0573 CYCYCCC 3401.304421 6 0.0000 1002 | 12/46
21 h-m-p 0.0000 0.0000 1842.5030 +YCYCCC 3373.309816 5 0.0000 1061 | 12/46
22 h-m-p 0.0000 0.0000 14558.0888 +YYCYCYC 3368.139025 6 0.0000 1120 | 12/46
23 h-m-p 0.0000 0.0000 33956.4944 +YYCYCYC 3362.630465 6 0.0000 1179 | 12/46
24 h-m-p 0.0000 0.0000 15981.7838 +YCYYYYC 3353.755176 6 0.0000 1236 | 12/46
25 h-m-p 0.0000 0.0000 7162.7429 +YYYCYCCC 3344.331332 7 0.0000 1296 | 12/46
26 h-m-p 0.0000 0.0000 16307.5394 +YYYYCCCC 3336.652617 7 0.0000 1356 | 12/46
27 h-m-p 0.0000 0.0000 2993.4587 +YYYYCCCC 3332.987916 7 0.0000 1416 | 12/46
28 h-m-p 0.0000 0.0000 17970.6544 YCCCC 3326.780218 4 0.0000 1472 | 12/46
29 h-m-p 0.0000 0.0000 3172.5181 +YCYCCC 3321.911507 5 0.0000 1530 | 12/46
30 h-m-p 0.0000 0.0000 1170.0846 YCYCCC 3319.341669 5 0.0000 1587 | 12/46
31 h-m-p 0.0000 0.0000 1290.0365 +YCYCCC 3317.497691 5 0.0000 1645 | 12/46
32 h-m-p 0.0000 0.0001 432.7373 CCCC 3316.324554 3 0.0000 1700 | 12/46
33 h-m-p 0.0000 0.0001 1339.1370 YCCC 3313.363510 3 0.0000 1754 | 12/46
34 h-m-p 0.0000 0.0000 1149.1544 +YCYCC 3312.193155 4 0.0000 1810 | 12/46
35 h-m-p 0.0000 0.0000 1811.9608 YCCC 3309.755726 3 0.0000 1864 | 12/46
36 h-m-p 0.0000 0.0001 896.7816 CYC 3308.215244 2 0.0000 1916 | 12/46
37 h-m-p 0.0000 0.0000 885.1404 +YYCCC 3306.179623 4 0.0000 1972 | 12/46
38 h-m-p 0.0000 0.0000 1385.0498 +YYCCC 3304.436336 4 0.0000 2028 | 12/46
39 h-m-p 0.0000 0.0000 3929.5510 +YCYCCC 3299.000645 5 0.0000 2086 | 12/46
40 h-m-p 0.0000 0.0000 13465.4561 ++ 3287.668315 m 0.0000 2135 | 12/46
41 h-m-p 0.0000 0.0000 11038.9896
h-m-p: 0.00000000e+00 0.00000000e+00 1.10389896e+04 3287.668315
.. | 12/46
42 h-m-p 0.0000 0.0000 1333.0239 YCCC 3283.483469 3 0.0000 2235 | 12/46
43 h-m-p 0.0000 0.0000 718.5734 YCCCC 3281.442991 4 0.0000 2291 | 12/46
44 h-m-p 0.0000 0.0000 553.7628 CC 3280.998373 1 0.0000 2342 | 12/46
45 h-m-p 0.0000 0.0000 410.1623 ++ 3280.655700 m 0.0000 2391 | 13/46
46 h-m-p 0.0000 0.0000 441.1668 CCCC 3280.193970 3 0.0000 2446 | 13/46
47 h-m-p 0.0000 0.0000 414.4494 CCCC 3279.890498 3 0.0000 2501 | 13/46
48 h-m-p 0.0000 0.0000 881.9448 YCCC 3279.121043 3 0.0000 2555 | 13/46
49 h-m-p 0.0000 0.0000 2584.4667 CCC 3278.185964 2 0.0000 2608 | 13/46
50 h-m-p 0.0000 0.0000 889.3409 CCC 3277.816204 2 0.0000 2661 | 13/46
51 h-m-p 0.0000 0.0000 515.6831 CCC 3277.537351 2 0.0000 2714 | 13/46
52 h-m-p 0.0000 0.0001 447.1651 CCCC 3277.243032 3 0.0000 2769 | 13/46
53 h-m-p 0.0000 0.0001 649.3258 YCCC 3276.614161 3 0.0000 2823 | 13/46
54 h-m-p 0.0000 0.0000 919.9303 YCYCC 3275.955446 4 0.0000 2878 | 13/46
55 h-m-p 0.0000 0.0000 3306.2591 CCC 3274.665510 2 0.0000 2931 | 13/46
56 h-m-p 0.0000 0.0000 3229.5772 +YYYYCC 3268.863448 5 0.0000 2987 | 13/46
57 h-m-p 0.0000 0.0000 19012.1901 +YCCCC 3255.950509 4 0.0000 3044 | 13/46
58 h-m-p 0.0000 0.0000 15275.8880 +YCCC 3248.980426 3 0.0000 3099 | 13/46
59 h-m-p 0.0000 0.0000 7685.9106 +YCCC 3247.647603 3 0.0000 3154 | 13/46
60 h-m-p 0.0000 0.0000 4291.4729 YCCC 3245.645091 3 0.0000 3208 | 13/46
61 h-m-p 0.0000 0.0000 6615.7302 YCCC 3244.863038 3 0.0000 3262 | 13/46
62 h-m-p 0.0000 0.0001 932.4113 YYC 3244.371216 2 0.0000 3313 | 13/46
63 h-m-p 0.0000 0.0000 509.5124 CCCC 3244.231608 3 0.0000 3368 | 13/46
64 h-m-p 0.0000 0.0001 192.4240 YC 3244.177906 1 0.0000 3418 | 13/46
65 h-m-p 0.0000 0.0006 37.0884 CC 3244.169206 1 0.0000 3469 | 13/46
66 h-m-p 0.0000 0.0024 12.7678 YC 3244.167464 1 0.0000 3519 | 13/46
67 h-m-p 0.0000 0.0022 6.5835 YC 3244.166851 1 0.0000 3569 | 13/46
68 h-m-p 0.0001 0.0075 2.6112 YC 3244.163956 1 0.0001 3619 | 13/46
69 h-m-p 0.0000 0.0017 17.8497 +C 3244.147132 0 0.0001 3669 | 13/46
70 h-m-p 0.0000 0.0005 42.9245 CC 3244.124937 1 0.0000 3720 | 13/46
71 h-m-p 0.0001 0.0007 27.5221 CC 3244.120089 1 0.0000 3771 | 13/46
72 h-m-p 0.0001 0.0022 8.5250 C 3244.119511 0 0.0000 3820 | 13/46
73 h-m-p 0.0001 0.0079 2.0905 CC 3244.118419 1 0.0001 3871 | 13/46
74 h-m-p 0.0000 0.0180 3.9165 +++CCC 3243.910418 2 0.0032 3927 | 13/46
75 h-m-p 0.0000 0.0007 709.5500 ++CYYCCC 3237.830968 5 0.0004 3986 | 13/46
76 h-m-p 0.0000 0.0000 15908.2195 +YCCC 3234.010579 3 0.0000 4041 | 13/46
77 h-m-p 0.3213 1.6067 0.5158 YCCC 3230.757666 3 0.7581 4095 | 13/46
78 h-m-p 0.5317 2.6586 0.5682 YCC 3227.723805 2 0.8903 4180 | 13/46
79 h-m-p 0.8809 4.4045 0.4201 YCY 3224.903537 2 1.5288 4265 | 13/46
80 h-m-p 0.5158 2.5789 0.4637 YCCC 3223.178721 3 1.1142 4352 | 13/46
81 h-m-p 0.5744 2.8722 0.3434 YCCCC 3222.221380 4 1.2669 4441 | 13/46
82 h-m-p 1.1872 7.0918 0.3665 CCC 3221.791854 2 1.1556 4527 | 13/46
83 h-m-p 1.2498 8.0000 0.3388 CCC 3221.535842 2 1.2250 4613 | 13/46
84 h-m-p 1.2674 6.3372 0.2913 CC 3221.416026 1 1.2638 4697 | 13/46
85 h-m-p 1.6000 8.0000 0.1248 YC 3221.398364 1 1.0460 4780 | 13/46
86 h-m-p 1.6000 8.0000 0.0447 YC 3221.395876 1 1.0011 4863 | 13/46
87 h-m-p 1.6000 8.0000 0.0121 YC 3221.395603 1 0.8854 4946 | 13/46
88 h-m-p 1.6000 8.0000 0.0008 Y 3221.395563 0 1.1535 5028 | 13/46
89 h-m-p 1.4492 8.0000 0.0006 Y 3221.395557 0 1.0222 5110 | 13/46
90 h-m-p 1.6000 8.0000 0.0003 C 3221.395556 0 1.3623 5192 | 13/46
91 h-m-p 1.6000 8.0000 0.0001 -Y 3221.395556 0 0.0602 5275 | 13/46
92 h-m-p 0.0421 8.0000 0.0001 ------------C 3221.395556 0 0.0000 5369
Out..
lnL = -3221.395556
5370 lfun, 16110 eigenQcodon, 461820 P(t)
end of tree file.
Time used: 3:54
Model 2: PositiveSelection
TREE # 1
(12, 16, 30, 8, (((((((11, 18), (((13, 17, 26, 1, 2, 6, 10, 15, 20, 25, 24, 29), 14), 23, 9), (7, 28)), 22), (5, 19)), 4), 3), (21, 27))); MP score: 140
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
37
0.067185 0.054885 0.038460 0.016986 0.034352 0.107133 0.109649 0.080705 0.105646 0.103870 0.045933 0.097975 0.023816 0.036227 0.106993 0.017210 0.016276 0.100921 0.062356 0.053542 0.091737 0.075518 0.093637 0.102700 0.097662 0.040862 0.041213 0.038789 0.049517 0.092863 0.043766 0.025634 0.017721 0.060821 0.094140 0.046386 0.033258 0.024494 0.109932 0.031082 0.047878 0.097066 0.092286 6.053611 1.068405 0.349092 0.124944 1.329351
ntime & nrate & np: 43 3 48
Bounds (np=48):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 3.195236
np = 48
lnL0 = -4066.228798
Iterating by ming2
Initial: fx= 4066.228798
x= 0.06719 0.05488 0.03846 0.01699 0.03435 0.10713 0.10965 0.08070 0.10565 0.10387 0.04593 0.09797 0.02382 0.03623 0.10699 0.01721 0.01628 0.10092 0.06236 0.05354 0.09174 0.07552 0.09364 0.10270 0.09766 0.04086 0.04121 0.03879 0.04952 0.09286 0.04377 0.02563 0.01772 0.06082 0.09414 0.04639 0.03326 0.02449 0.10993 0.03108 0.04788 0.09707 0.09229 6.05361 1.06841 0.34909 0.12494 1.32935
1 h-m-p 0.0000 0.0001 2154.2819 ++ 3811.974605 m 0.0001 53 | 0/48
2 h-m-p 0.0000 0.0000 134672.0390 +YCYYCCC 3806.404120 6 0.0000 114 | 0/48
3 h-m-p 0.0000 0.0000 88440.8268 ++ 3800.707229 m 0.0000 165 | 0/48
4 h-m-p 0.0000 0.0000 122730.7357 ++ 3758.309825 m 0.0000 216 | 1/48
5 h-m-p 0.0000 0.0000 2640.1973 ++ 3699.579173 m 0.0000 267 | 2/48
6 h-m-p 0.0000 0.0000 11398.7472 ++ 3669.666833 m 0.0000 318 | 3/48
7 h-m-p 0.0000 0.0000 1911.5349 ++ 3667.640554 m 0.0000 369 | 4/48
8 h-m-p 0.0000 0.0000 996.6885 ++ 3658.168463 m 0.0000 420 | 5/48
9 h-m-p 0.0000 0.0000 1843.9966 ++ 3624.974471 m 0.0000 471 | 6/48
10 h-m-p 0.0000 0.0000 3660.5796 ++ 3611.984816 m 0.0000 522 | 7/48
11 h-m-p 0.0000 0.0000 11773.8449 ++ 3587.038317 m 0.0000 573 | 8/48
12 h-m-p 0.0000 0.0000 10079.1974 ++ 3574.507242 m 0.0000 624 | 9/48
13 h-m-p 0.0000 0.0000 10206.5355 ++ 3551.551451 m 0.0000 675 | 10/48
14 h-m-p 0.0000 0.0000 104620.9956 ++ 3507.633522 m 0.0000 726 | 11/48
15 h-m-p 0.0000 0.0000 53914.9564 ++ 3506.677463 m 0.0000 777 | 12/48
16 h-m-p 0.0000 0.0000 1441.2538 ++ 3498.553066 m 0.0000 828 | 13/48
17 h-m-p 0.0000 0.0000 4134.6503 +CCYYCYCCC 3428.062414 8 0.0000 893 | 13/48
18 h-m-p 0.0000 0.0000 8258.2335 +CYCYYC 3412.298228 5 0.0000 953 | 13/48
19 h-m-p 0.0000 0.0000 10649.1911 ++ 3405.151251 m 0.0000 1004 | 13/48
20 h-m-p 0.0000 0.0000 3168.7804
h-m-p: 2.79891759e-22 1.39945879e-21 3.16878040e+03 3405.151251
.. | 13/48
21 h-m-p 0.0000 0.0000 40234.7730 -CYYCYCCC 3400.035956 7 0.0000 1115 | 13/48
22 h-m-p 0.0000 0.0000 2269.7825 +YCYC 3387.099416 3 0.0000 1171 | 13/48
23 h-m-p 0.0000 0.0000 1435.8355 ++ 3365.620997 m 0.0000 1222 | 13/48
24 h-m-p 0.0000 0.0000 24239.7098 +YYYCCC 3363.784676 5 0.0000 1281 | 13/48
25 h-m-p 0.0000 0.0000 254005.5727 ++ 3356.191079 m 0.0000 1332 | 13/48
26 h-m-p 0.0000 0.0000 11885.4182 +CYYYYCCCC 3332.345607 8 0.0000 1396 | 13/48
27 h-m-p 0.0000 0.0000 10541.3348 +YYYCCC 3328.176194 5 0.0000 1455 | 13/48
28 h-m-p 0.0000 0.0000 11651.0752 +CCCC 3318.013353 3 0.0000 1513 | 13/48
29 h-m-p 0.0000 0.0000 2125.7276 YCYCCC 3313.752397 5 0.0000 1572 | 13/48
30 h-m-p 0.0000 0.0000 1755.6267 +YCYCCC 3307.505323 5 0.0000 1632 | 13/48
31 h-m-p 0.0000 0.0000 3763.7473 YCCCC 3304.236179 4 0.0000 1690 | 13/48
32 h-m-p 0.0000 0.0000 791.5099 CCCC 3303.076829 3 0.0000 1747 | 13/48
33 h-m-p 0.0000 0.0000 748.5753 CCCC 3302.184679 3 0.0000 1804 | 13/48
34 h-m-p 0.0000 0.0000 999.4762 CCCC 3301.386237 3 0.0000 1861 | 13/48
35 h-m-p 0.0000 0.0001 767.5105 CYCCC 3299.800545 4 0.0000 1919 | 13/48
36 h-m-p 0.0000 0.0001 247.2126 CYC 3299.456231 2 0.0000 1973 | 13/48
37 h-m-p 0.0000 0.0001 325.3464 CCC 3299.100501 2 0.0000 2028 | 13/48
38 h-m-p 0.0000 0.0001 496.3047 +YYCC 3297.900791 3 0.0000 2084 | 13/48
39 h-m-p 0.0000 0.0001 436.9508 YC 3297.682847 1 0.0000 2136 | 13/48
40 h-m-p 0.0000 0.0002 225.4236 CC 3297.487712 1 0.0000 2189 | 13/48
41 h-m-p 0.0000 0.0001 208.5923 CCC 3297.310677 2 0.0000 2244 | 13/48
42 h-m-p 0.0000 0.0001 360.0327 YC 3296.994497 1 0.0000 2296 | 13/48
43 h-m-p 0.0000 0.0001 469.0289 CYC 3296.757537 2 0.0000 2350 | 13/48
44 h-m-p 0.0000 0.0002 771.0780 +CYCC 3295.440988 3 0.0001 2407 | 13/48
45 h-m-p 0.0000 0.0001 1304.8560 +YYCCC 3292.786030 4 0.0001 2465 | 13/48
46 h-m-p 0.0000 0.0000 13062.4789 +YYYYYC 3286.141280 5 0.0000 2522 | 13/48
47 h-m-p 0.0000 0.0000 18496.2347 +YYYYCCCC 3282.968226 7 0.0000 2584 | 13/48
48 h-m-p 0.0000 0.0000 43019.7473 ++ 3272.130435 m 0.0000 2635 | 14/48
49 h-m-p 0.0000 0.0000 17355.1241 +YCCCC 3265.917677 4 0.0000 2694 | 14/48
50 h-m-p 0.0000 0.0000 1664.6552 YCYC 3265.387319 3 0.0000 2749 | 14/48
51 h-m-p 0.0002 0.0010 94.4990 YCCC 3265.337025 3 0.0000 2805 | 14/48
52 h-m-p 0.0001 0.0015 18.2191 CC 3265.325763 1 0.0000 2858 | 14/48
53 h-m-p 0.0001 0.0275 8.1589 +++YCCCC 3261.038964 4 0.0143 2919 | 14/48
54 h-m-p 0.0366 0.4734 3.2004 +YCCYC 3248.188812 4 0.3999 2978 | 14/48
55 h-m-p 0.1622 0.8110 1.2614 +YYYYC 3235.874525 4 0.6277 3034 | 14/48
56 h-m-p 0.0285 0.1424 5.3707 +YYCCCC 3231.695153 5 0.0872 3094 | 13/48
57 h-m-p 0.0006 0.0030 108.6171 YCCC 3231.613246 3 0.0001 3150 | 13/48
58 h-m-p 0.0149 0.2176 0.5645 +CYYCC 3229.090502 4 0.1435 3209 | 13/48
59 h-m-p 0.1044 0.6254 0.7759 YCYC 3227.849283 3 0.2050 3299 | 13/48
60 h-m-p 0.1048 0.5242 0.9897 YCC 3226.507661 2 0.2206 3388 | 13/48
61 h-m-p 0.1489 0.7446 0.2923 +YCYCC 3225.665882 4 0.4448 3481 | 13/48
62 h-m-p 0.2316 1.1580 0.3366 +YCYC 3224.707353 3 0.6534 3572 | 13/48
63 h-m-p 0.5549 2.7745 0.0971 CCC 3224.457131 2 0.5901 3662 | 13/48
64 h-m-p 0.4037 3.0855 0.1419 YCC 3224.136632 2 0.7405 3751 | 13/48
65 h-m-p 0.6356 6.3447 0.1654 +YCY 3223.582557 2 1.7618 3841 | 13/48
66 h-m-p 0.9726 4.8630 0.2052 CC 3223.126492 1 1.2090 3929 | 13/48
67 h-m-p 1.3277 8.0000 0.1869 CYC 3222.751707 2 1.4603 4018 | 13/48
68 h-m-p 0.9828 4.9140 0.2486 CCCC 3222.356728 3 1.4538 4110 | 13/48
69 h-m-p 1.6000 8.0000 0.1982 CCC 3222.052736 2 2.1384 4200 | 13/48
70 h-m-p 1.6000 8.0000 0.1753 YYC 3221.926324 2 1.3578 4288 | 13/48
71 h-m-p 1.6000 8.0000 0.0916 YC 3221.873648 1 1.1283 4375 | 13/48
72 h-m-p 1.6000 8.0000 0.0231 CC 3221.829960 1 2.0289 4463 | 13/48
73 h-m-p 0.5398 8.0000 0.0870 +YC 3221.787857 1 1.7507 4551 | 13/48
74 h-m-p 1.6000 8.0000 0.0740 CCC 3221.738144 2 2.1125 4641 | 13/48
75 h-m-p 1.1981 8.0000 0.1305 CC 3221.697708 1 1.3154 4729 | 13/48
76 h-m-p 1.6000 8.0000 0.0467 C 3221.673659 0 1.6000 4815 | 13/48
77 h-m-p 1.4041 8.0000 0.0532 YC 3221.634294 1 3.2526 4902 | 13/48
78 h-m-p 1.6000 8.0000 0.0866 CC 3221.597251 1 2.2667 4990 | 13/48
79 h-m-p 1.6000 8.0000 0.0399 CC 3221.573075 1 2.3215 5078 | 13/48
80 h-m-p 0.9507 8.0000 0.0974 YC 3221.555530 1 1.5606 5165 | 13/48
81 h-m-p 1.6000 8.0000 0.0476 CC 3221.544850 1 1.4885 5253 | 13/48
82 h-m-p 1.6000 8.0000 0.0244 YC 3221.538565 1 2.6688 5340 | 13/48
83 h-m-p 1.1287 8.0000 0.0577 +YC 3221.525454 1 3.3380 5428 | 13/48
84 h-m-p 1.6000 8.0000 0.0569 YC 3221.503716 1 3.0780 5515 | 13/48
85 h-m-p 1.6000 8.0000 0.0955 C 3221.487515 0 1.6287 5601 | 13/48
86 h-m-p 1.4352 8.0000 0.1083 YC 3221.474207 1 2.5329 5688 | 13/48
87 h-m-p 1.6000 8.0000 0.0721 YC 3221.456534 1 3.0813 5775 | 13/48
88 h-m-p 1.6000 8.0000 0.1036 YC 3221.440030 1 2.8243 5862 | 13/48
89 h-m-p 1.6000 8.0000 0.1112 CC 3221.423615 1 2.3729 5950 | 13/48
90 h-m-p 1.6000 8.0000 0.0755 CC 3221.417413 1 2.3964 6038 | 13/48
91 h-m-p 1.6000 8.0000 0.0302 C 3221.416575 0 1.3676 6124 | 13/48
92 h-m-p 1.6000 8.0000 0.0043 C 3221.416502 0 2.0504 6210 | 13/48
93 h-m-p 1.6000 8.0000 0.0016 ++ 3221.416238 m 8.0000 6296 | 13/48
94 h-m-p 0.6734 8.0000 0.0194 +YC 3221.415123 1 5.3079 6384 | 13/48
95 h-m-p 1.6000 8.0000 0.0428 +C 3221.411169 0 6.0412 6471 | 13/48
96 h-m-p 1.6000 8.0000 0.1027 +YC 3221.404685 1 5.3615 6559 | 13/48
97 h-m-p 1.6000 8.0000 0.1977 YC 3221.399739 1 2.5833 6646 | 13/48
98 h-m-p 1.5847 8.0000 0.3223 CC 3221.397322 1 2.0355 6734 | 13/48
99 h-m-p 1.6000 8.0000 0.2411 YC 3221.396303 1 2.7952 6821 | 13/48
100 h-m-p 1.6000 8.0000 0.2735 YC 3221.395715 1 2.9452 6908 | 13/48
101 h-m-p 1.6000 8.0000 0.3123 C 3221.395440 0 2.5366 6994 | 13/48
102 h-m-p 1.6000 8.0000 0.2967 C 3221.395343 0 2.3427 7080 | 13/48
103 h-m-p 1.6000 8.0000 0.3009 Y 3221.395292 0 3.0598 7166 | 13/48
104 h-m-p 1.6000 8.0000 0.3222 C 3221.395271 0 2.2199 7252 | 13/48
105 h-m-p 1.6000 8.0000 0.3221 Y 3221.395262 0 2.8884 7338 | 13/48
106 h-m-p 1.6000 8.0000 0.3271 C 3221.395258 0 2.4265 7424 | 13/48
107 h-m-p 1.6000 8.0000 0.3133 C 3221.395257 0 2.3923 7510 | 13/48
108 h-m-p 1.6000 8.0000 0.3772 Y 3221.395256 0 3.6220 7596 | 13/48
109 h-m-p 1.6000 8.0000 0.2222 Y 3221.395256 0 1.1780 7682 | 13/48
110 h-m-p 0.6610 8.0000 0.3960 Y 3221.395256 0 1.6457 7768 | 13/48
111 h-m-p 1.4434 8.0000 0.4515 +Y 3221.395256 0 6.3262 7855 | 13/48
112 h-m-p 1.6000 8.0000 0.0248 C 3221.395256 0 0.4000 7941 | 13/48
113 h-m-p 0.0562 8.0000 0.1768 C 3221.395256 0 0.0730 8027 | 13/48
114 h-m-p 0.0419 8.0000 0.3079 +Y 3221.395256 0 0.1238 8114 | 13/48
115 h-m-p 0.1294 8.0000 0.2946 Y 3221.395256 0 0.1294 8200 | 13/48
116 h-m-p 0.0336 8.0000 1.1358 --------------.. | 13/48
117 h-m-p 0.0000 0.0057 0.8585 Y 3221.395255 0 0.0000 8349 | 13/48
118 h-m-p 0.0002 0.1217 0.0578 --C 3221.395255 0 0.0000 8437 | 13/48
119 h-m-p 0.0006 0.2809 0.0314 ---Y 3221.395255 0 0.0000 8526 | 13/48
120 h-m-p 0.0018 0.9041 0.0137 ----C 3221.395255 0 0.0000 8616 | 13/48
121 h-m-p 0.0015 0.7367 0.0065 ---Y 3221.395255 0 0.0000 8705 | 13/48
122 h-m-p 0.0051 2.5392 0.0045 ------Y 3221.395255 0 0.0000 8797 | 13/48
123 h-m-p 0.0160 8.0000 0.0015 -------------.. | 13/48
124 h-m-p 0.0160 8.0000 0.6116 ------------- | 13/48
125 h-m-p 0.0160 8.0000 0.6116 -------------
Out..
lnL = -3221.395255
9089 lfun, 36356 eigenQcodon, 1172481 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -3245.063003 S = -3190.014170 -92.633321
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 161 patterns 13:25
did 20 / 161 patterns 13:25
did 30 / 161 patterns 13:25
did 40 / 161 patterns 13:25
did 50 / 161 patterns 13:25
did 60 / 161 patterns 13:25
did 70 / 161 patterns 13:25
did 80 / 161 patterns 13:25
did 90 / 161 patterns 13:25
did 100 / 161 patterns 13:26
did 110 / 161 patterns 13:26
did 120 / 161 patterns 13:26
did 130 / 161 patterns 13:26
did 140 / 161 patterns 13:26
did 150 / 161 patterns 13:26
did 160 / 161 patterns 13:26
did 161 / 161 patterns 13:26end of tree file.
Time used: 13:26
Model 7: beta
TREE # 1
(12, 16, 30, 8, (((((((11, 18), (((13, 17, 26, 1, 2, 6, 10, 15, 20, 25, 24, 29), 14), 23, 9), (7, 28)), 22), (5, 19)), 4), 3), (21, 27))); MP score: 140
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
37
0.010375 0.090999 0.060590 0.011435 0.037527 0.076616 0.083460 0.025588 0.059497 0.103070 0.031447 0.020869 0.010456 0.105183 0.089799 0.074922 0.106240 0.108621 0.071838 0.015986 0.088799 0.078473 0.044608 0.055214 0.106100 0.109915 0.057949 0.094671 0.082162 0.071912 0.019173 0.059462 0.106923 0.089871 0.030533 0.077409 0.050609 0.028207 0.081673 0.104730 0.082309 0.108746 0.064248 6.053695 0.811510 1.374345
ntime & nrate & np: 43 1 46
Bounds (np=46):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 4.158620
np = 46
lnL0 = -4339.283464
Iterating by ming2
Initial: fx= 4339.283464
x= 0.01037 0.09100 0.06059 0.01144 0.03753 0.07662 0.08346 0.02559 0.05950 0.10307 0.03145 0.02087 0.01046 0.10518 0.08980 0.07492 0.10624 0.10862 0.07184 0.01599 0.08880 0.07847 0.04461 0.05521 0.10610 0.10992 0.05795 0.09467 0.08216 0.07191 0.01917 0.05946 0.10692 0.08987 0.03053 0.07741 0.05061 0.02821 0.08167 0.10473 0.08231 0.10875 0.06425 6.05370 0.81151 1.37435
1 h-m-p 0.0000 0.0000 2463.0399 ++ 4191.908195 m 0.0000 97 | 1/46
2 h-m-p 0.0000 0.0000 26506.8279 ++ 3963.779858 m 0.0000 192 | 2/46
3 h-m-p 0.0000 0.0000 14439624.4180 ++ 3933.748496 m 0.0000 286 | 2/46
4 h-m-p 0.0000 0.0000 24855.4607
h-m-p: 9.77282067e-23 4.88641034e-22 2.48554607e+04 3933.748496
.. | 2/46
5 h-m-p 0.0000 0.0000 2474.5708 ++ 3773.681967 m 0.0000 469 | 3/46
6 h-m-p 0.0000 0.0000 19635.9710 ++ 3704.815350 m 0.0000 562 | 4/46
7 h-m-p 0.0000 0.0000 92625608.5151 ++ 3623.840715 m 0.0000 654 | 5/46
8 h-m-p 0.0000 0.0000 72806.2940 ++ 3597.415926 m 0.0000 745 | 6/46
9 h-m-p 0.0000 0.0000 223694.7025 ++ 3556.842037 m 0.0000 835 | 7/46
10 h-m-p 0.0000 0.0000 33018.8409 ++ 3499.121631 m 0.0000 924 | 8/46
11 h-m-p 0.0000 0.0000 10718.2603 +CYCCCC 3467.200183 5 0.0000 1023 | 8/46
12 h-m-p 0.0000 0.0000 9993.4693 ++ 3443.813592 m 0.0000 1110 | 9/46
13 h-m-p 0.0000 0.0000 4290.2327 ++ 3400.705535 m 0.0000 1197 | 10/46
14 h-m-p 0.0000 0.0000 29587.3312 ++ 3382.693174 m 0.0000 1283 | 11/46
15 h-m-p 0.0000 0.0000 4186.2848 ++ 3349.191046 m 0.0000 1368 | 12/46
16 h-m-p 0.0000 0.0000 1292.7117 +YYCYCCC 3337.921486 6 0.0000 1462 | 12/46
17 h-m-p 0.0000 0.0000 1408.7173 +YYYCCC 3336.028723 5 0.0000 1553 | 12/46
18 h-m-p 0.0000 0.0000 3599.3669 +YYCCC 3331.783286 4 0.0000 1643 | 12/46
19 h-m-p 0.0000 0.0000 671.9265 +YCCC 3328.965951 3 0.0000 1732 | 12/46
20 h-m-p 0.0000 0.0000 824.4132 YCCCC 3326.639041 4 0.0000 1822 | 12/46
21 h-m-p 0.0000 0.0000 478.2092 +YCYCC 3324.796395 4 0.0000 1912 | 12/46
22 h-m-p 0.0000 0.0000 1099.9850 YCCC 3323.501792 3 0.0000 2000 | 12/46
23 h-m-p 0.0000 0.0001 556.1548 CCCC 3321.975527 3 0.0000 2089 | 12/46
24 h-m-p 0.0000 0.0000 510.7264 YCCCC 3321.167973 4 0.0000 2179 | 12/46
25 h-m-p 0.0000 0.0000 476.8774 +YCYC 3320.158698 3 0.0000 2267 | 12/46
26 h-m-p 0.0000 0.0001 594.6335 CCCC 3319.072827 3 0.0000 2356 | 12/46
27 h-m-p 0.0000 0.0001 234.3821 YCCCC 3318.394995 4 0.0000 2446 | 12/46
28 h-m-p 0.0000 0.0001 450.0981 +YYCCCCC 3315.246683 6 0.0001 2540 | 12/46
29 h-m-p 0.0000 0.0000 1813.3266 +YCYCCC 3313.561102 5 0.0000 2632 | 12/46
30 h-m-p 0.0000 0.0000 944.6913 YCCCC 3312.541104 4 0.0000 2722 | 12/46
31 h-m-p 0.0000 0.0001 523.1277 CCCCC 3311.687724 4 0.0000 2813 | 12/46
32 h-m-p 0.0000 0.0001 1895.6973 ++ 3301.737874 m 0.0001 2896 | 12/46
33 h-m-p 0.0000 0.0000 10556.0177
h-m-p: 1.68833332e-22 8.44166661e-22 1.05560177e+04 3301.737874
.. | 12/46
34 h-m-p 0.0000 0.0000 959110.4659 ---YYCYCCC 3298.071109 6 0.0000 3072 | 12/46
35 h-m-p 0.0000 0.0000 7181.0420 CYCCCC 3277.462183 5 0.0000 3164 | 12/46
36 h-m-p 0.0000 0.0000 1087.1400 +CYCCC 3268.756890 4 0.0000 3255 | 12/46
37 h-m-p 0.0000 0.0000 1825.6235 YCCC 3265.823634 3 0.0000 3343 | 12/46
38 h-m-p 0.0000 0.0000 1129.9621 +YYYCYCYC 3260.862799 7 0.0000 3436 | 12/46
39 h-m-p 0.0000 0.0000 331.8384 CYCCC 3260.638973 4 0.0000 3526 | 12/46
40 h-m-p 0.0000 0.0001 310.3752 YCCC 3260.047635 3 0.0000 3614 | 12/46
41 h-m-p 0.0000 0.0001 518.5932 YCCC 3259.869933 3 0.0000 3702 | 12/46
42 h-m-p 0.0000 0.0001 257.5576 YCC 3259.616794 2 0.0000 3788 | 12/46
43 h-m-p 0.0000 0.0000 476.7434 YCCCC 3259.086970 4 0.0000 3878 | 12/46
44 h-m-p 0.0000 0.0000 1167.2475 CCC 3258.636306 2 0.0000 3965 | 12/46
45 h-m-p 0.0000 0.0000 1477.2970 CCCC 3257.888456 3 0.0000 4054 | 12/46
46 h-m-p 0.0000 0.0000 1483.2592 YCCC 3256.940395 3 0.0000 4142 | 12/46
47 h-m-p 0.0000 0.0000 916.0185 YCYC 3256.231579 3 0.0000 4229 | 12/46
48 h-m-p 0.0000 0.0000 3733.8827 CCC 3255.367935 2 0.0000 4316 | 12/46
49 h-m-p 0.0000 0.0000 1739.3290 +YYCCC 3253.872121 4 0.0000 4406 | 12/46
50 h-m-p 0.0000 0.0000 8193.3879 +YCYCCC 3250.431969 5 0.0000 4498 | 12/46
51 h-m-p 0.0000 0.0000 15653.8095 +YYYCCCC 3238.105266 6 0.0000 4591 | 12/46
52 h-m-p 0.0000 0.0000 4064.4031 CCCCC 3237.070828 4 0.0000 4682 | 12/46
53 h-m-p 0.0000 0.0001 201.7463 YCC 3237.000965 2 0.0000 4768 | 12/46
54 h-m-p 0.0000 0.0003 58.4348 CC 3236.989487 1 0.0000 4853 | 12/46
55 h-m-p 0.0000 0.0007 39.3391 YC 3236.976065 1 0.0000 4937 | 12/46
56 h-m-p 0.0000 0.0014 42.5232 YC 3236.959168 1 0.0000 5021 | 12/46
57 h-m-p 0.0000 0.0003 160.3061 +CYC 3236.897715 2 0.0000 5108 | 12/46
58 h-m-p 0.0000 0.0003 414.6967 +CCCC 3236.502364 3 0.0001 5198 | 12/46
59 h-m-p 0.0000 0.0001 2053.9930 CCCC 3235.961552 3 0.0000 5287 | 12/46
60 h-m-p 0.0000 0.0001 3001.9216 CCCC 3235.516229 3 0.0000 5376 | 12/46
61 h-m-p 0.0000 0.0001 3473.6723 +CYCCC 3233.124213 4 0.0001 5467 | 12/46
62 h-m-p 0.0000 0.0000 8883.7245 YCCCC 3231.956916 4 0.0000 5557 | 12/46
63 h-m-p 0.0000 0.0002 312.4871 YC 3231.919265 1 0.0000 5641 | 12/46
64 h-m-p 0.0002 0.0035 17.8401 -CC 3231.917391 1 0.0000 5727 | 12/46
65 h-m-p 0.0000 0.0013 8.0603 YC 3231.916717 1 0.0000 5811 | 12/46
66 h-m-p 0.0001 0.0150 1.8514 +CC 3231.906318 1 0.0005 5897 | 12/46
67 h-m-p 0.0000 0.0233 37.8358 ++++YYYC 3224.568938 3 0.0113 5987 | 12/46
68 h-m-p 0.1336 0.6680 0.2041 YCCC 3222.638823 3 0.2760 6075 | 12/46
69 h-m-p 0.3948 1.9742 0.0948 CCC 3222.212100 2 0.5724 6162 | 12/46
70 h-m-p 0.5645 2.8226 0.0649 CYC 3222.011737 2 0.5159 6248 | 12/46
71 h-m-p 0.6581 4.5361 0.0508 CCC 3221.840457 2 1.0241 6335 | 12/46
72 h-m-p 0.8429 8.0000 0.0618 CCC 3221.684525 2 1.2536 6422 | 12/46
73 h-m-p 1.6000 8.0000 0.0309 YC 3221.626522 1 0.8394 6506 | 12/46
74 h-m-p 1.1253 8.0000 0.0230 YC 3221.604891 1 0.7739 6590 | 12/46
75 h-m-p 0.9352 8.0000 0.0191 YC 3221.599420 1 0.6936 6674 | 12/46
76 h-m-p 1.0389 8.0000 0.0127 YC 3221.598383 1 0.7012 6758 | 12/46
77 h-m-p 1.0283 8.0000 0.0087 C 3221.598071 0 1.0555 6841 | 12/46
78 h-m-p 0.9363 8.0000 0.0098 YC 3221.597626 1 2.0931 6925 | 12/46
79 h-m-p 0.9370 8.0000 0.0219 +C 3221.595533 0 4.2662 7009 | 12/46
80 h-m-p 1.4816 8.0000 0.0629 +YC 3221.588208 1 4.6963 7094 | 12/46
81 h-m-p 1.1441 8.0000 0.2583 +CC 3221.562549 1 4.1588 7180 | 12/46
82 h-m-p 1.6000 8.0000 0.6576 CC 3221.533762 1 1.9747 7265 | 12/46
83 h-m-p 1.6000 8.0000 0.6110 YC 3221.513580 1 2.5517 7349 | 12/46
84 h-m-p 1.6000 8.0000 0.7066 YC 3221.493397 1 2.9728 7433 | 12/46
85 h-m-p 1.6000 8.0000 1.1260 CC 3221.474939 1 1.8660 7518 | 12/46
86 h-m-p 1.6000 8.0000 0.9073 CC 3221.466167 1 1.3277 7603 | 12/46
87 h-m-p 1.6000 8.0000 0.1600 YC 3221.465385 1 1.2232 7687 | 12/46
88 h-m-p 1.6000 8.0000 0.0129 C 3221.465186 0 1.8844 7770 | 12/46
89 h-m-p 0.5648 8.0000 0.0431 +YC 3221.464630 1 4.6375 7855 | 12/46
90 h-m-p 1.6000 8.0000 0.0122 YC 3221.463590 1 3.3231 7939 | 12/46
91 h-m-p 0.1596 8.0000 0.2545 +YC 3221.463258 1 1.4430 8024 | 12/46
92 h-m-p 1.6000 8.0000 0.0931 C 3221.463174 0 1.6435 8107 | 12/46
93 h-m-p 1.6000 8.0000 0.0062 Y 3221.463115 0 3.7264 8190 | 12/46
94 h-m-p 0.8979 8.0000 0.0255 ++ 3221.462681 m 8.0000 8273 | 12/46
95 h-m-p 0.5448 8.0000 0.3751 +YC 3221.460494 1 3.8348 8358 | 12/46
96 h-m-p 1.6000 8.0000 0.5454 ++ 3221.444229 m 8.0000 8441 | 12/46
97 h-m-p 0.7219 8.0000 6.0439 +YCC 3221.426334 2 2.1938 8528 | 12/46
98 h-m-p 1.6000 8.0000 4.0774 CC 3221.418497 1 2.1742 8613 | 12/46
99 h-m-p 1.6000 8.0000 5.0138 YC 3221.413421 1 2.9989 8697 | 12/46
100 h-m-p 1.2531 6.2653 6.8523 +CC 3221.407705 1 4.2369 8783 | 12/46
101 h-m-p 0.2166 1.0831 12.8333 ++ 3221.405319 m 1.0831 8866 | 13/46
102 h-m-p 0.3748 2.7152 1.1890 -YC 3221.405172 1 0.0128 8951 | 13/46
103 h-m-p 0.2534 8.0000 0.0600 --------------Y 3221.405172 0 0.0000 9047 | 13/46
104 h-m-p 0.0024 1.1894 1.2190 +C 3221.404773 0 0.0117 9130 | 13/46
105 h-m-p 1.6000 8.0000 0.0013 Y 3221.404722 0 1.2685 9212 | 13/46
106 h-m-p 1.6000 8.0000 0.0005 Y 3221.404719 0 1.1215 9294 | 13/46
107 h-m-p 1.6000 8.0000 0.0001 -----Y 3221.404719 0 0.0004 9381
Out..
lnL = -3221.404719
9382 lfun, 103202 eigenQcodon, 4034260 P(t)
end of tree file.
Time used: 43:50
Model 8: beta&w>1
TREE # 1
(12, 16, 30, 8, (((((((11, 18), (((13, 17, 26, 1, 2, 6, 10, 15, 20, 25, 24, 29), 14), 23, 9), (7, 28)), 22), (5, 19)), 4), 3), (21, 27))); MP score: 140
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
37
0.075898 0.050894 0.092888 0.033754 0.094562 0.055745 0.076938 0.030688 0.041663 0.068683 0.015112 0.061554 0.027293 0.030500 0.041261 0.043448 0.056374 0.091168 0.100114 0.104451 0.016785 0.068403 0.051181 0.062843 0.054898 0.098710 0.106146 0.048028 0.074443 0.048092 0.073199 0.017828 0.069659 0.024619 0.056736 0.101866 0.078657 0.010039 0.035868 0.075704 0.017935 0.102616 0.020179 6.061925 0.900000 0.554330 1.239837 1.300000
ntime & nrate & np: 43 2 48
Bounds (np=48):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 3.949599
np = 48
lnL0 = -4091.142979
Iterating by ming2
Initial: fx= 4091.142979
x= 0.07590 0.05089 0.09289 0.03375 0.09456 0.05575 0.07694 0.03069 0.04166 0.06868 0.01511 0.06155 0.02729 0.03050 0.04126 0.04345 0.05637 0.09117 0.10011 0.10445 0.01679 0.06840 0.05118 0.06284 0.05490 0.09871 0.10615 0.04803 0.07444 0.04809 0.07320 0.01783 0.06966 0.02462 0.05674 0.10187 0.07866 0.01004 0.03587 0.07570 0.01794 0.10262 0.02018 6.06193 0.90000 0.55433 1.23984 1.30000
1 h-m-p 0.0000 0.0000 2149.8148 ++ 3968.726141 m 0.0000 101 | 1/48
2 h-m-p 0.0000 0.0000 33630.6342 ++ 3858.212162 m 0.0000 200 | 2/48
3 h-m-p 0.0000 0.0000 1320395.3534 ++ 3810.915439 m 0.0000 298 | 2/48
4 h-m-p 0.0000 0.0000 34953.1621 ++ 3717.341711 m 0.0000 395 | 2/48
5 h-m-p 0.0000 0.0000 37454.8974 +CYCYCCC 3706.919549 6 0.0000 503 | 2/48
6 h-m-p 0.0000 0.0000 67213.6734 ++ 3703.133641 m 0.0000 600 | 2/48
7 h-m-p -0.0000 -0.0000 31849.8908
h-m-p: -8.15022633e-25 -4.07511317e-24 3.18498908e+04 3703.133641
.. | 2/48
8 h-m-p 0.0000 0.0000 362274.7875 ---YCYYYYCCCC 3697.582351 9 0.0000 807 | 2/48
9 h-m-p 0.0000 0.0000 5355.2772 ++ 3650.316332 m 0.0000 904 | 3/48
10 h-m-p 0.0000 0.0000 2321.4317 ++ 3625.792170 m 0.0000 1001 | 4/48
11 h-m-p 0.0000 0.0000 22608.9380 ++ 3623.023023 m 0.0000 1097 | 5/48
12 h-m-p 0.0000 0.0000 104888.6416 ++ 3595.540453 m 0.0000 1192 | 6/48
13 h-m-p 0.0000 0.0000 235285.8630 ++ 3504.853963 m 0.0000 1286 | 6/48
14 h-m-p 0.0000 0.0000 12518.7924 ++ 3480.067417 m 0.0000 1379 | 6/48
15 h-m-p 0.0000 0.0000 45558.2489
h-m-p: 5.27942559e-24 2.63971279e-23 4.55582489e+04 3480.067417
.. | 6/48
16 h-m-p 0.0000 0.0000 3606.1533 ++ 3468.312267 m 0.0000 1562 | 7/48
17 h-m-p 0.0000 0.0000 2143.4628 ++ 3462.267907 m 0.0000 1655 | 8/48
18 h-m-p 0.0000 0.0000 29020.7228 ++ 3448.341959 m 0.0000 1747 | 9/48
19 h-m-p 0.0000 0.0000 40284.8509 ++ 3388.059379 m 0.0000 1838 | 10/48
20 h-m-p 0.0000 0.0000 90667.2345 ++ 3362.270331 m 0.0000 1928 | 11/48
21 h-m-p 0.0000 0.0000 6862.4559 ++ 3349.088404 m 0.0000 2017 | 12/48
22 h-m-p 0.0000 0.0000 2273.8014 +YYYYYCCCC 3339.983124 8 0.0000 2117 | 12/48
23 h-m-p 0.0000 0.0000 4889.7504 +YYCCC 3336.348668 4 0.0000 2211 | 12/48
24 h-m-p 0.0000 0.0000 1801.8345 +YCYCC 3334.029796 4 0.0000 2305 | 12/48
25 h-m-p 0.0000 0.0000 2176.5844 +YYCCCC 3326.328194 5 0.0000 2401 | 12/48
26 h-m-p 0.0000 0.0000 5752.3139 +YYYCCC 3322.432730 5 0.0000 2496 | 12/48
27 h-m-p 0.0000 0.0000 7373.6889 YCCC 3321.171467 3 0.0000 2588 | 12/48
28 h-m-p 0.0000 0.0000 4170.5047 +CYCCC 3311.534839 4 0.0000 2684 | 12/48
29 h-m-p 0.0000 0.0000 35494.1936 YCCC 3309.786627 3 0.0000 2776 | 12/48
30 h-m-p 0.0000 0.0000 8127.9809 +YYYCCC 3307.800057 5 0.0000 2871 | 12/48
31 h-m-p 0.0000 0.0000 1840.1478 CYCCC 3307.573450 4 0.0000 2965 | 12/48
32 h-m-p 0.0000 0.0000 239.1201 CCC 3307.389704 2 0.0000 3056 | 12/48
33 h-m-p 0.0000 0.0000 412.3162 YCC 3307.140199 2 0.0000 3146 | 12/48
34 h-m-p 0.0000 0.0000 875.9382 CCCC 3306.710376 3 0.0000 3239 | 12/48
35 h-m-p 0.0000 0.0001 1533.3134 +YYCCC 3301.648088 4 0.0000 3333 | 12/48
36 h-m-p 0.0000 0.0000 25923.7261 ++ 3294.695330 m 0.0000 3420 | 13/48
37 h-m-p 0.0000 0.0000 2063.7713 CCCC 3294.247759 3 0.0000 3513 | 13/48
38 h-m-p 0.0000 0.0000 8256.4125 CYCCC 3292.681375 4 0.0000 3606 | 13/48
39 h-m-p 0.0000 0.0000 42579.3916 +YYYCCC 3288.695383 5 0.0000 3700 | 13/48
40 h-m-p 0.0000 0.0000 5706.5988 +YYCCCC 3287.805133 5 0.0000 3795 | 13/48
41 h-m-p 0.0000 0.0000 4008.8628 YCCC 3287.295637 3 0.0000 3886 | 13/48
42 h-m-p 0.0000 0.0001 1338.5230 YCCCC 3285.925588 4 0.0000 3979 | 13/48
43 h-m-p 0.0000 0.0000 8008.6712 CYCCC 3284.709116 4 0.0000 4072 | 13/48
44 h-m-p 0.0000 0.0000 1656.5172 YC 3284.508032 1 0.0000 4159 | 13/48
45 h-m-p 0.0000 0.0000 826.0300 YYC 3284.367062 2 0.0000 4247 | 13/48
46 h-m-p 0.0000 0.0000 585.5933 CCC 3284.246335 2 0.0000 4337 | 13/48
47 h-m-p 0.0001 0.0006 50.6554 CCCC 3283.881607 3 0.0001 4429 | 13/48
48 h-m-p 0.0000 0.0001 445.7550 YCCC 3282.935320 3 0.0000 4520 | 13/48
49 h-m-p 0.0003 0.0015 60.8561 CYC 3282.815999 2 0.0001 4609 | 13/48
50 h-m-p 0.0000 0.0004 327.7789 ++CYCCC 3279.389314 4 0.0003 4705 | 13/48
51 h-m-p 0.0002 0.0010 224.7719 +YCYCCC 3274.779260 5 0.0006 4800 | 13/48
52 h-m-p 0.0000 0.0002 694.0324 CYCCC 3274.315459 4 0.0001 4893 | 13/48
53 h-m-p 0.0006 0.0076 88.1936 ++ 3262.884055 m 0.0076 4979 | 14/48
54 h-m-p 0.0172 0.0859 14.5061 +YCYCCC 3251.320210 5 0.0462 5074 | 14/48
55 h-m-p 0.0399 0.1993 0.9933 +YYYYCC 3246.888632 5 0.1522 5166 | 14/48
56 h-m-p 0.1527 0.7637 0.9428 CYCCC 3243.912817 4 0.1040 5258 | 14/48
57 h-m-p 0.0918 0.4590 0.5890 +YYYCYCCC 3237.833018 7 0.3852 5354 | 14/48
58 h-m-p 0.3038 1.5189 0.5701 +YYCCC 3233.701108 4 0.9287 5446 | 14/48
59 h-m-p 0.1679 0.8393 0.6408 +YYYYYYY 3228.470601 6 0.6700 5538 | 14/48
60 h-m-p 0.1614 0.8071 0.1163 +YCYCC 3227.382240 4 0.4710 5630 | 14/48
61 h-m-p 0.0554 0.2768 0.4965 YCCCC 3226.772648 4 0.1308 5722 | 14/48
62 h-m-p 0.1826 0.9131 0.2348 YCYC 3226.082167 3 0.4647 5811 | 14/48
63 h-m-p 0.4795 4.5986 0.2275 CCC 3225.424439 2 0.7407 5900 | 14/48
64 h-m-p 1.0824 7.2156 0.1557 YCCC 3224.700447 3 1.8841 5990 | 14/48
65 h-m-p 1.5864 7.9318 0.1583 CC 3224.301989 1 1.5397 6077 | 14/48
66 h-m-p 1.2905 6.4523 0.1612 CCC 3224.034364 2 1.4955 6166 | 14/48
67 h-m-p 1.6000 8.0000 0.0796 YCC 3223.870195 2 2.6729 6254 | 14/48
68 h-m-p 1.6000 8.0000 0.0431 YC 3223.795062 1 2.7071 6340 | 14/48
69 h-m-p 1.6000 8.0000 0.0158 YC 3223.720601 1 3.1386 6426 | 14/48
70 h-m-p 1.6000 8.0000 0.0263 YC 3223.657214 1 2.9075 6512 | 14/48
71 h-m-p 1.6000 8.0000 0.0104 YC 3223.576954 1 3.0365 6598 | 14/48
72 h-m-p 1.6000 8.0000 0.0191 YC 3223.527162 1 2.8517 6684 | 14/48
73 h-m-p 1.6000 8.0000 0.0107 +YC 3223.456308 1 4.2513 6771 | 14/48
74 h-m-p 1.6000 8.0000 0.0129 YC 3223.353828 1 3.4679 6857 | 14/48
75 h-m-p 1.6000 8.0000 0.0083 YC 3223.295969 1 2.7079 6943 | 14/48
76 h-m-p 1.6000 8.0000 0.0132 +YC 3223.188330 1 4.4839 7030 | 14/48
77 h-m-p 1.6000 8.0000 0.0122 YC 3223.124650 1 3.3502 7116 | 14/48
78 h-m-p 1.4730 8.0000 0.0278 CC 3223.089497 1 2.0494 7203 | 14/48
79 h-m-p 1.6000 8.0000 0.0239 YC 3223.067798 1 3.6704 7289 | 14/48
80 h-m-p 1.6000 8.0000 0.0082 YC 3223.050372 1 2.6661 7375 | 14/48
81 h-m-p 1.2565 8.0000 0.0175 +YC 3223.033945 1 3.8078 7462 | 14/48
82 h-m-p 1.6000 8.0000 0.0015 YC 3223.017656 1 3.6657 7548 | 14/48
83 h-m-p 0.7348 8.0000 0.0075 +YC 3222.997907 1 5.0127 7635 | 14/48
84 h-m-p 1.6000 8.0000 0.0220 +YC 3222.929075 1 7.1141 7722 | 14/48
85 h-m-p 1.6000 8.0000 0.0284 +YC 3222.800336 1 4.5068 7809 | 14/48
86 h-m-p 1.5944 8.0000 0.0804 YC 3222.664881 1 3.4828 7895 | 14/48
87 h-m-p 1.6000 8.0000 0.0823 +YC 3222.446221 1 4.3095 7982 | 14/48
88 h-m-p 1.5238 7.6188 0.1900 CCCC 3222.181074 3 2.5494 8073 | 14/48
89 h-m-p 1.6000 8.0000 0.2180 YCCC 3221.974088 3 2.8667 8163 | 14/48
90 h-m-p 1.6000 8.0000 0.3327 YCCC 3221.748444 3 2.9712 8253 | 14/48
91 h-m-p 1.6000 8.0000 0.2805 CCC 3221.642252 2 2.1760 8342 | 14/48
92 h-m-p 1.6000 8.0000 0.2923 YC 3221.550303 1 2.7425 8428 | 14/48
93 h-m-p 1.6000 8.0000 0.1590 YC 3221.506920 1 2.6840 8514 | 14/48
94 h-m-p 1.6000 8.0000 0.1542 CC 3221.490576 1 2.4689 8601 | 14/48
95 h-m-p 1.6000 8.0000 0.0928 YC 3221.478839 1 3.1788 8687 | 14/48
96 h-m-p 1.6000 8.0000 0.0196 YC 3221.471237 1 3.4160 8773 | 14/48
97 h-m-p 1.6000 8.0000 0.0193 CC 3221.467853 1 2.2368 8860 | 14/48
98 h-m-p 1.6000 8.0000 0.0204 CC 3221.466941 1 2.0966 8947 | 14/48
99 h-m-p 1.6000 8.0000 0.0131 C 3221.466690 0 2.4334 9032 | 14/48
100 h-m-p 1.6000 8.0000 0.0077 YC 3221.466503 1 2.8523 9118 | 14/48
101 h-m-p 1.6000 8.0000 0.0009 Y 3221.466425 0 2.9134 9203 | 14/48
102 h-m-p 0.3932 8.0000 0.0070 +C 3221.466398 0 1.8468 9289 | 14/48
103 h-m-p 1.6000 8.0000 0.0021 Y 3221.466384 0 3.0698 9374 | 14/48
104 h-m-p 1.6000 8.0000 0.0019 C 3221.466379 0 1.9087 9459 | 14/48
105 h-m-p 1.6000 8.0000 0.0009 +C 3221.466371 0 5.9288 9545 | 14/48
106 h-m-p 1.6000 8.0000 0.0020 +Y 3221.466359 0 4.8772 9631 | 14/48
107 h-m-p 1.6000 8.0000 0.0026 +Y 3221.466332 0 5.2214 9717 | 14/48
108 h-m-p 1.6000 8.0000 0.0038 +Y 3221.466304 0 4.0649 9803 | 14/48
109 h-m-p 1.6000 8.0000 0.0005 +Y 3221.466257 0 5.1343 9889 | 14/48
110 h-m-p 0.3080 8.0000 0.0085 +++ 3221.466090 m 8.0000 9975 | 14/48
111 h-m-p 1.1473 8.0000 0.0594 +Y 3221.465480 0 5.4650 10061 | 14/48
112 h-m-p 1.6000 8.0000 0.0894 +YC 3221.464000 1 5.0679 10148 | 14/48
113 h-m-p 1.6000 8.0000 0.2559 ++ 3221.459098 m 8.0000 10233 | 14/48
114 h-m-p 1.6000 8.0000 0.6692 ++ 3221.446395 m 8.0000 10318 | 14/48
115 h-m-p 1.3838 8.0000 3.8685 +YC 3221.427905 1 4.2666 10405 | 14/48
116 h-m-p 1.6000 8.0000 3.0676 CC 3221.421797 1 1.9928 10492 | 14/48
117 h-m-p 1.4839 8.0000 4.1195 +CC 3221.415971 1 5.2323 10580 | 14/48
118 h-m-p 1.1529 5.7647 6.2522 +YC 3221.411502 1 3.0061 10667 | 14/48
119 h-m-p 0.3819 1.9095 9.0327 ++ 3221.408822 m 1.9095 10752 | 15/48
120 h-m-p 0.4866 5.8657 1.1598 ---------------Y 3221.408822 0 0.0000 10852 | 15/48
121 h-m-p 0.0160 8.0000 0.1350 ++YC 3221.407408 1 0.4871 10939 | 15/48
122 h-m-p 0.9303 8.0000 0.0707 C 3221.406913 0 0.2354 11023 | 15/48
123 h-m-p 1.6000 8.0000 0.0017 C 3221.406608 0 2.3659 11107 | 15/48
124 h-m-p 1.6000 8.0000 0.0003 C 3221.406544 0 1.6568 11191 | 15/48
125 h-m-p 1.6000 8.0000 0.0001 --------C 3221.406544 0 0.0000 11283
Out..
lnL = -3221.406544
11284 lfun, 135408 eigenQcodon, 5337332 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -3251.244365 S = -3190.016554 -59.709156
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 161 patterns 1:23:53
did 20 / 161 patterns 1:23:53
did 30 / 161 patterns 1:23:53
did 40 / 161 patterns 1:23:54
did 50 / 161 patterns 1:23:54
did 60 / 161 patterns 1:23:54
did 70 / 161 patterns 1:23:54
did 80 / 161 patterns 1:23:54
did 90 / 161 patterns 1:23:55
did 100 / 161 patterns 1:23:55
did 110 / 161 patterns 1:23:55
did 120 / 161 patterns 1:23:55
did 130 / 161 patterns 1:23:55
did 140 / 161 patterns 1:23:56
did 150 / 161 patterns 1:23:56
did 160 / 161 patterns 1:23:56
did 161 / 161 patterns 1:23:56end of tree file.
Time used: 1:23:56
The loglikelihoods for models M1, M2, M7 and M8 are -3221.395556 -3221.395255 -3221.404719 -3221.406544 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV
************************************************************
USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV TKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV TKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV TKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV TKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV TKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV TKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV TKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV TKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSAIGSPDVEDFNRIATSDWTDVSDY
GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV TKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV TKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV TKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV TKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY
*************:*********************** **********************
USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVAGPKELLLKWEVGRPKPPLNRNS
GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS
*************************************.**********************
USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFLLTSHNVQPLRAPT
PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT
**********************************************:*************
USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY
************************************************************
USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV SGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYIFST
PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST
.*******************************************************:***
USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLKP
CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP
**********************************************************:*
USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGN
************************************************************
USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVANRMLGLQIQTVDSSQGS
CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRLLGLQIQTVDSSQGS
GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV VQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGS
*******************************************.*:**************
USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV EYDYVIYAQTSDTAHASNVNRFNVAITRAKKGILCIMCDRSLFDLLKFFELKLSDLQ
GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV EYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
*******:********.***************************:************
>USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGACCACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTTTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATTCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGATTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGACCACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGAAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCTATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGTTCTGCTGGTAATGTTTTTGGTTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAGGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAAGACTCATTGCGTCTATTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCTCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTTTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGCACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGACAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAACCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACGAGGGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTTTTTGAGCTTAAATTGTCTGATTTGCAG >KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCTATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGTTCTGCTGGTAATGTTTTTGGTTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAGGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAAGACTCATTGCGTCTATTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCTCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATACAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCACCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTATTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATTTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCTATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGTTCTGCTGGTAATGTTTTTGGTTTGTACAAAAATTCTGCTACCGGCTCACCCGACGTTGAGGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTATTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCTCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGTATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGCGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGCGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGACCACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTTGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACATTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGCCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCCTTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTCCAAATTGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACATTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGACAATGGTTCAAGTATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGAGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCACTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCTATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGTTCTGCTGGTAATGTTTTCGGTTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAGGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAAGACTCATTGCGTCTATTTGCAGCGGAAACCATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCTCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTTTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGCACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCCGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGACAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAACCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTATACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTTTTTGAGCTTAAATTGTCTGATTTGCAG >LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTTCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTTTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGTTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGACCACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATACGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTCGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGAGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTTTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTATATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGCACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGACAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAACCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTATACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTTTTTGAGCTTAAATTGTCTGATTTGCAG >PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCTATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGTTCTGCTGGTAATGTTTTTGGTTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAGGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAAGACTCATTGCGTCTATTTGCAGCGGAAACCATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCTCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTTTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGCACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCCGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGACAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAACCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTATACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTTTTTGAGCTTAAATTGTCTGATTTGCAG >USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGACCACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTCGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGACCACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTAGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCTATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGTTCTGCTGGTAATGTTTTTGGTTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAGGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAAGACTCATTGCGTCTATTTGCAGCGGAAACCATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCTCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTTTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGCACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCCGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGACAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAACCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTATACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTTTTTGAGCTTAAATTGTCTGATTTGCAG >OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGACCACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAACCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAACCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTTTTTGAGCTTAAATTGTCTGATTTGCAG >CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTATTGCTCAAATGGGAAGTCGGCAGACCCAAGCCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCCAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTCTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGCACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGACAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAACCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTATACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTTTTTGAGCTTAAATTGTCTGATTTGCAG >YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCTATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGTTCTGCTGGTAATGTTTTTGGTTTGTACAAAAATTCTGCTACCGGCTCACCCGACGTTGAGGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTATTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCTCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGTATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGACCACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCTATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGTTCTGCTGGTAATGTTTTTGGTTTGTATAAGAATTCTGCTACCGGCTCACCCGATGTTGAGGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAAGACTCATTGCGTCTATTTGCTGCAGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCTCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCACCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCAGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGACTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTTTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGTATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGCACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGACAATGGTTCAAGCATCAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAACCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTATACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAATAGGTTTAATGTTGCCATCACAAGGGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTTTTTGAGCTTAAATTGTCTGATTTGCAG >85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACCAAGCTCTACTTAGGTGGTCTTAGTTACTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTATACAAAAATTCTGCTATCGGTTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTATTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGCAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCTCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGACGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGTGCACCAACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCCCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATTGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTCTGTGTGAAGGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGTAATGCGGACATTGTTGTGGTGGATGAAGTTTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAATGTTGTCACTCAACGTATGTGTGCCCTTAAGCCTGATGTCTTCTTGCACAAGTGTTATCGCTGTCCTGCAGAGATAGTGCGCACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCTGACAGCAAGCAGTGTTTTAAGATCTTTTGCAAGGGTAATGTGCAGGTTGATAACGGTTCAAGTATTAACCGTAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTCATTTCCCCTTATAACAGCCAGAATTATGTTGCCAGCCGTTTGCTAGGTTTACAAATTCAGACAGTTGATTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACGCACAAACCTCAGATACTGCCCATGCCAGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATCTGCTTAAATTTTTTGAGCTTAAATTGTCTGATTTGCAG >GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGTATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTACGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGACCACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGACCACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCCGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGACCACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCTATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGTTCTGCTGGTAATGTTTTTGGTTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAGGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAAGACTCATTGCGTCTATTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCTCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCACCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCAGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTTTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGCACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGACAATGGTTCAAGCATCAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAACCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTATACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTTTTTGAGCTTAAATTGTCTGATTTGCAG >PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACTGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAAATAGTGCGTACTGTGTCTGAAATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGACAATGGTTCAAGTATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCGAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTAGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGAGCTAAGAAAGGCATATTATGTATAATGTGTGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCCATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGACCACAAGCCACGTCTTGCATTCCCGTTGTGCTCTGCTGGTAATGTTTTTGGCTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAAGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAGGACTCATTGCGTCTGTTTGCAGCGGAAACTATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTATGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCCCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAATTGATTGGTAAGCAGAAGATTACAACTATTCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCTTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCTACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTCTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGTACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCTGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGATAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAATCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTCTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTACACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCCAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTCTTTGAGCTTAAATTGTCTGATTTGCAG >PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV TCTGCAGGGCTTTGTGTTGTTTGTGGCTCTCAAACTGTTTTACGTTGTGGTGATTGTCTACGGCGTCCTATGCTTTGTACTAAGTGTGCTTATGATCATGTCATTGGAACAACTCACAAGTTCATTTTGGCTATCACTCCATATGTGTGTTGTGCTTCAGATTGTGGTGTCAATGATGTAACTAAGCTCTACTTAGGTGGTCTTAGTTATTGGTGTCATGAACACAAGCCACGTCTTGCATTCCCGTTGTGTTCTGCTGGTAATGTTTTTGGTTTGTACAAAAATTCTGCTACCGGCTCACCCGATGTTGAGGACTTTAATCGCATTGCTACATCCGATTGGACTGATGTTTCTGACTACAGGTTGGCAAATGATGTCAAAGACTCATTGCGTCTATTTGCAGCGGAAACCATCAAGGCCAAGGAGGAGAGCGTTAAGTCATCCTACGCTTGTGCAACACTACATGAGGTTGTAGGACCTAAAGAGTTGTTGCTCAAATGGGAAGTCGGCAGACCCAAACCACCTCTTAATAGAAATTCGGTTTTCACTTGTTATCATATAACGAAGAACACCAAATTTCAAATCGGTGAGTTTGTGTTTGAGAAGGCAGAATATGATAATGATGCTGTAACATATAAAACTACCGCCACAACAAAACTTGTTCCTGGCATGGTTTTTGTGCTTACCTCACATAATGTTCAGCCATTGCGCGCACCGACCATTGCTAATCAAGAACGTTATTCCACTATACATAAGTTGCATCCTGCTTTTAACATACCTGAAGCTTATTCTAGCTTAGTGCCCTATTACCAACTGATTGGTAAGCAGAAGATTACAACTATCCAGGGACCTCCCGGTAGTGGTAAATCTCACTGTGTTATAGGGCTAGGTTTGTACTATCCAGGTGCACGTATAGTGTTTACAGCTTGTTCTCATGCAGCGGTCGATTCACTTTGTGTGAAAGCCTCCACTGCTTATAGCAATGACAAATGTTCACGCATCATACCACAGCGTGCTCGTGTTGAGTGTTATGACGGTTTCAAGTCTAATAATACTAGTGCTCAGTACCTTTTCTCCACTGTCAATGCTTTGCCAGAGTGCAATGCGGACATTGTTGTGGTGGATGAGGTTTCTATGTGCACTAATTATGACTTGTCTGTCATAAATCAGCGCATCAGCTATAGGCATGTAGTCTATGTTGGTGACCCTCAACAGCTGCCTGCACCACGTGTTATGATTTCACGTGGTACTTTGGAACCAAAGGACTACAACGTTGTCACTCAACGCATGTGTGCCCTTAAGCCTGATGTTTTCTTGCACAAGTGTTATCGCTGTCCTGCTGAGATAGTGCGCACTGTGTCTGAGATGGTCTATGAAAACCAATTCATTCCCGTGCACCCAGATAGCAAGCAGTGTTTTAAAATCTTTTGCAAGGGTAATGTTCAGGTTGACAATGGTTCAAGCATTAATCGCAGGCAATTGGATGTTGTGCGTATGTTTTTGGCTAAAAACCCTAGGTGGTCAAAGGCTGTTTTTATTTCTCCTTATAACAGCCAGAATTATGTTGCCAGCCGCATGCTAGGTTTACAAATTCAGACAGTTGACTCATCCCAGGGTAGTGAGTATGACTATGTCATTTATACACAAACTTCAGATACTGCCCATGCCTGTAATGTTAACAGGTTTAATGTTGCCATCACAAGGGCTAAGAAAGGCATATTATGTATAATGTGCGATAGGTCCCTTTTTGATGTGCTTAAATTTTTTGAGCTTAAATTGTCTGATTTGCAG
>USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFLLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYSGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLKPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYIFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVANRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSAIGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVAGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRLLGLQIQTVDSSQGSEYDYVIYAQTSDTAHASNVNRFNVAITRAKKGILCIMCDRSLFDLLKFFELKLSDLQ >GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHDHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ >PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDVTKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDYRLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNSVFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPTIANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYYPGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEPKDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKGNVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRMLGLQIQTVDSSQGSEYDYVIYTQTSDTAHACNVNRFNVAITRAKKGILCIMCDRSLFDVLKFFELKLSDLQ
Reading sequence file /data//pss_subsets/LZW_nsp10_VIPR_ALG4_672096710_15373_17163_1_2012_02_China_Swine_PEDV.result/original_alignment/codeml/fasta/LZW_nsp10_VIPR_ALG4_672096710_15373_17163_1_2012_02_China_Swine_PEDV.result.1
Found 30 sequences of length 1791
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 1.0%
Found 35 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 2
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 73 polymorphic sites
**p-Value(s)**
----------
NSS: 4.60e-02 (1000 permutations)
Max Chi^2: 2.92e-01 (1000 permutations)
PHI (Permutation): 1.60e-02 (1000 permutations)
PHI (Normal): 1.09e-02
#NEXUS
[ID: 0217044692]
begin taxa;
dimensions ntax=30;
taxlabels
PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV
CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV
USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV
OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV
PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV
CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV
85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV
KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV
COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV
USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV
KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV
PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV
PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV
USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV
CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV
PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV
PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV
GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV
PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV
PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV
USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV
USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV
USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV
YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV
PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV
GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV
Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV
LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV
FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV
PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV
;
end;
begin trees;
translate
1 PEDV_GER_L00798_K11_14_02_2014_nsp10_VIPR_ALG4_SNQ28069_1_15373_17163_1_NA_NA_Unknown_PEDV,
2 CH_SCZY103_2017_nsp10_VIPR_ALG4_AZL47215_1_15373_17163_1_2017_12_01_China_Swine_PEDV,
3 USA_Minnesota409_2014_nsp10_VIPR_ALG4_825144937_15325_17115_1_2014_08_28_USA_Swine_PEDV,
4 OH851_nsp10_VIPR_ALG4_591400268_15373_17163_1_2014_01_15_USA_Swine_PEDV,
5 PEDV_GER_L00907_K16_14_02_2014_nsp10_VIPR_ALG4_SNT95652_1_15373_17163_1_NA_NA_Unknown_PEDV,
6 CH_TP_2_2_2018_nsp10_VIPR_ALG4_QCC26580_1_15373_17163_1_2018_China_Swine_PEDV,
7 85_7_mutant1_nsp10_VIPR_ALG4_AST13220_1_15360_17150_1_2015_09_China_Unknown_PEDV,
8 KNU_1706_nsp10_VIPR_ALG4_AWM11479_1_15373_17163_1_2017_12_South_Korea_Swine_PEDV,
9 COL_Antioquia00265_2015_nsp10_VIPR_ALG4_QGQ60215_1_15361_17151_1_2015_01_09_Colombia_Swine_PEDV,
10 USA_Tennesse56_2013_nsp10_VIPR_ALG4_658130372_15338_17128_1_2013_11_04_USA_Swine_PEDV,
11 KNU_1708_nsp10_VIPR_ALG4_AWM11485_1_15373_17163_1_2017_06_South_Korea_Swine_PEDV,
12 PEDV_GER_L00906_K16_14_01_2014_nsp10_VIPR_ALG4_SNQ27990_1_15373_17163_1_NA_NA_Unknown_PEDV,
13 PEDV_AUSTRIA_L01064_M10_15_03_2015_nsp10_VIPR_ALG4_SNQ28050_1_15373_17163_1_NA_NA_Unknown_PEDV,
14 USA_Missouri92_2013_nsp10_VIPR_ALG4_658130582_15338_17128_1_2013_12_11_USA_Swine_PEDV,
15 CH_HNYF_14_nsp10_VIPR_ALG4_923095212_15373_17163_1_2014_12_China_Swine_PEDV,
16 PEDV_MEX_MICH_01_2013_nsp10_VIPR_ALG4_AVU05409_1_15203_16993_1_2013_07_24_Mexico_Swine_PEDV,
17 PEDV_USA_Texas132_2015_nsp10_VIPR_ALG4_1034700865_15344_17134_1_2015_11_05_USA_Swine_PEDV,
18 GDS01_nsp10_VIPR_ALG4_815939790_15373_17163_1_2012_11_10_China_Swine_PEDV,
19 PEDV_SH_nsp10_VIPR_ALG4_QED40660_1_15373_17163_1_2016_10_China_Swine_PEDV,
20 PEDV_MEX_JAL_19_2017_nsp10_VIPR_ALG4_AVU05353_1_15203_16993_1_2017_05_10_Mexico_Swine_PEDV,
21 USA_Illinois63_2013_nsp10_VIPR_ALG4_658130407_15338_17128_1_2013_11_19_USA_Swine_PEDV,
22 USA_Texas31_2013_nsp10_VIPR_ALG4_658130267_15338_17128_1_2013_07_22_USA_Swine_PEDV,
23 USA_Kansas46_2013_nsp10_VIPR_ALG4_658130344_15338_17128_1_2013_10_23_USA_Swine_PEDV,
24 YN144_nsp10_VIPR_ALG4_946526359_15373_17163_1_2014_08_08_China_Swine_PEDV,
25 PEDV_USA_Minnesota129_2015_nsp10_VIPR_ALG4_1034700830_15344_17134_1_2015_10_22_USA_Swine_PEDV,
26 GDS20_nsp10_VIPR_ALG4_QCQ19803_1_15373_17163_1_2012_06_22_China_Swine_PEDV,
27 Aram_feces_nsp10_VIPR_ALG4_QDY92474_1_15373_17163_1_2014_South_Korea_Swine_PEDV,
28 LNCT2_nsp10_VIPR_ALG4_961474835_15373_17163_1_2014_09_11_China_Unknown_PEDV,
29 FKO_1_JPN_2014_nsp10_VIPR_ALG4_948549130_15315_17105_1_2014_03_Japan_Pig_PEDV,
30 PEDV_WS_nsp10_VIPR_ALG4_761662578_15373_17163_1_2014_03_China_Swine_PEDV
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:4.077976e-04,5:3.952971e-04,12:4.110926e-04,13:9.644235e-04,(((((((2:3.579612e-03,6:2.828813e-03)0.908:2.592051e-03,(((3:1.000273e-03,4:2.237105e-03,10:4.000449e-04,14:2.205654e-03,16:9.511208e-04,17:2.880394e-03,20:4.199670e-04,22:9.929694e-04,23:4.130396e-04,25:1.034474e-03,27:4.104644e-04,29:4.039892e-04)0.963:1.005604e-03,21:4.409680e-04)0.995:2.181530e-03,26:1.588771e-03,28:2.239688e-03)0.946:4.286286e-03,(19:4.187985e-03,30:4.162701e-03)0.976:1.583317e-03)0.548:1.632597e-03,7:3.133861e-02)0.950:3.544147e-03,(18:4.209671e-04,24:4.113847e-04)0.989:1.819951e-03)0.722:1.102160e-03,11:7.499209e-03)0.965:3.248411e-03,15:1.056941e-03)0.827:9.578582e-04,(8:4.676361e-03,9:4.069411e-04)1.000:2.299486e-03)0.993:1.679453e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:4.077976e-04,5:3.952971e-04,12:4.110926e-04,13:9.644235e-04,(((((((2:3.579612e-03,6:2.828813e-03):2.592051e-03,(((3:1.000273e-03,4:2.237105e-03,10:4.000449e-04,14:2.205654e-03,16:9.511208e-04,17:2.880394e-03,20:4.199670e-04,22:9.929694e-04,23:4.130396e-04,25:1.034474e-03,27:4.104644e-04,29:4.039892e-04):1.005604e-03,21:4.409680e-04):2.181530e-03,26:1.588771e-03,28:2.239688e-03):4.286286e-03,(19:4.187985e-03,30:4.162701e-03):1.583317e-03):1.632597e-03,7:3.133861e-02):3.544147e-03,(18:4.209671e-04,24:4.113847e-04):1.819951e-03):1.102160e-03,11:7.499209e-03):3.248411e-03,15:1.056941e-03):9.578582e-04,(8:4.676361e-03,9:4.069411e-04):2.299486e-03):1.679453e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -3353.76 -3381.67
2 -3353.22 -3381.76
--------------------------------------
TOTAL -3353.46 -3381.72
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.125966 0.000228 0.096178 0.154020 0.124839 1251.47 1333.43 1.000
r(A<->C){all} 0.073817 0.000686 0.027303 0.127495 0.071447 711.27 791.83 1.000
r(A<->G){all} 0.149888 0.001396 0.080895 0.222200 0.146406 785.17 806.37 1.000
r(A<->T){all} 0.039014 0.000238 0.012295 0.069225 0.037261 965.54 990.59 1.001
r(C<->G){all} 0.012156 0.000127 0.000006 0.034829 0.009062 665.59 700.55 1.000
r(C<->T){all} 0.698561 0.002239 0.602661 0.786275 0.701504 473.74 631.36 1.000
r(G<->T){all} 0.026564 0.000146 0.006474 0.050202 0.024738 956.51 995.26 1.000
pi(A){all} 0.256177 0.000104 0.236184 0.276509 0.256190 1046.05 1163.50 1.001
pi(C){all} 0.201485 0.000084 0.184127 0.219935 0.201337 1114.94 1137.98 1.000
pi(G){all} 0.217413 0.000092 0.198128 0.235541 0.217072 1008.66 1164.35 1.000
pi(T){all} 0.324926 0.000118 0.303402 0.345888 0.324931 1128.93 1149.91 1.000
alpha{1,2} 0.057968 0.001435 0.000041 0.124628 0.054835 827.51 841.18 1.000
alpha{3} 3.700031 2.233710 1.193617 6.577905 3.450016 1433.85 1467.43 1.000
pinvar{all} 0.730191 0.001345 0.659978 0.806316 0.733019 1080.81 1127.32 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/LZW_nsp10_VIPR_ALG4_672096710_15373_17163_1_2012_02_China_Swine_PEDV.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 30 ls = 597
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 16 16 17 16 16 16 | Ser TCT 15 15 14 15 14 15 | Tyr TAT 22 22 21 21 21 22 | Cys TGT 23 23 24 24 24 21
TTC 8 8 7 8 8 8 | TCC 6 6 7 6 7 6 | TAC 8 8 9 9 9 8 | TGC 5 5 4 4 4 7
Leu TTA 4 4 5 4 5 4 | TCA 13 12 12 12 12 12 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 20 19 18 18 18 19 | TCG 1 1 1 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 4 4 4 4 4 4
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 13 13 13 13 13 12 | Pro CCT 13 13 14 14 14 13 | His CAT 10 10 10 9 10 10 | Arg CGT 11 11 11 11 13 11
CTC 2 2 2 2 2 2 | CCC 5 5 4 4 4 5 | CAC 5 5 5 6 5 5 | CGC 9 9 9 9 7 9
CTA 5 5 5 6 5 5 | CCA 9 10 10 10 10 10 | Gln CAA 10 10 10 10 10 10 | CGA 0 0 0 0 0 0
CTG 2 2 2 2 2 2 | CCG 2 2 2 2 2 2 | CAG 13 13 13 13 13 13 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 14 14 13 15 13 15 | Thr ACT 20 20 20 20 20 20 | Asn AAT 24 24 23 24 24 24 | Ser AGT 4 4 4 4 4 4
ATC 7 7 8 6 8 7 | ACC 5 5 5 5 5 5 | AAC 6 6 7 6 6 6 | AGC 8 8 8 8 8 8
ATA 10 10 10 10 10 10 | ACA 11 11 10 11 11 11 | Lys AAA 15 16 16 16 15 15 | Arg AGA 2 2 2 2 2 2
Met ATG 9 9 9 9 9 9 | ACG 1 1 2 1 1 1 | AAG 21 21 20 20 21 21 | AGG 7 7 7 7 7 7
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 27 27 28 27 27 28 | Ala GCT 19 19 20 20 20 19 | Asp GAT 22 21 19 21 19 21 | Gly GGT 18 18 19 19 19 18
GTC 12 12 11 12 12 11 | GCC 9 9 8 8 8 9 | GAC 10 11 12 10 12 11 | GGC 6 6 5 5 5 6
GTA 4 4 4 4 4 4 | GCA 10 10 10 10 10 10 | Glu GAA 8 7 8 8 8 8 | GGA 3 3 3 3 3 3
GTG 12 13 13 13 13 13 | GCG 3 3 3 3 3 3 | GAG 13 13 14 14 14 13 | GGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 15 16 16 16 16 17 | Ser TCT 14 14 15 15 14 14 | Tyr TAT 21 22 21 22 21 22 | Cys TGT 22 24 23 23 23 24
TTC 9 8 8 8 8 7 | TCC 6 7 6 6 7 7 | TAC 9 8 9 8 9 8 | TGC 6 4 5 5 5 4
Leu TTA 5 5 5 4 5 5 | TCA 13 12 12 12 12 12 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 18 18 19 19 18 18 | TCG 1 1 1 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 4 4 4 4 4 4
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 13 13 13 13 13 13 | Pro CCT 13 13 13 13 13 13 | His CAT 10 10 10 10 10 10 | Arg CGT 12 11 11 11 11 11
CTC 2 2 2 2 2 2 | CCC 5 5 5 5 5 5 | CAC 5 5 5 5 5 5 | CGC 8 9 9 9 8 9
CTA 4 5 4 5 4 5 | CCA 10 10 10 10 10 10 | Gln CAA 10 10 10 10 10 10 | CGA 0 0 0 0 1 0
CTG 3 2 2 2 3 2 | CCG 2 2 2 2 2 2 | CAG 13 13 13 13 13 13 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 14 13 14 14 13 13 | Thr ACT 19 19 20 20 20 19 | Asn AAT 24 23 24 24 23 23 | Ser AGT 5 4 5 4 4 4
ATC 7 8 7 7 8 8 | ACC 5 6 5 5 5 6 | AAC 6 7 6 6 7 7 | AGC 7 8 7 8 8 8
ATA 10 10 10 10 10 10 | ACA 12 11 11 11 11 11 | Lys AAA 15 16 15 15 15 16 | Arg AGA 3 2 2 2 2 2
Met ATG 9 9 9 9 9 9 | ACG 1 1 1 1 1 1 | AAG 21 20 21 21 21 20 | AGG 6 7 7 7 7 7
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 27 28 29 27 28 28 | Ala GCT 19 20 18 19 19 20 | Asp GAT 19 19 21 21 19 19 | Gly GGT 18 19 18 18 18 19
GTC 12 11 11 12 10 11 | GCC 10 8 10 9 9 8 | GAC 12 12 10 11 12 12 | GGC 6 5 6 6 6 5
GTA 4 4 4 4 5 4 | GCA 9 10 10 10 10 10 | Glu GAA 9 8 9 8 9 8 | GGA 3 3 3 3 3 3
GTG 13 13 12 13 13 13 | GCG 3 3 3 3 3 3 | GAG 13 14 13 13 13 14 | GGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 15 16 16 17 17 17 | Ser TCT 15 15 15 14 15 13 | Tyr TAT 22 22 22 22 22 22 | Cys TGT 23 23 23 24 23 23
TTC 9 8 8 7 7 7 | TCC 6 6 6 7 6 8 | TAC 8 8 8 8 8 8 | TGC 5 5 5 4 5 5
Leu TTA 4 4 5 5 4 6 | TCA 12 12 12 12 12 12 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 19 19 18 18 19 16 | TCG 1 1 1 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 4 4 4 4 4 4
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 13 13 13 13 13 13 | Pro CCT 13 13 13 13 13 13 | His CAT 10 10 10 10 10 10 | Arg CGT 11 11 11 11 11 11
CTC 2 2 2 2 2 2 | CCC 5 5 5 5 5 5 | CAC 5 5 5 5 5 5 | CGC 9 9 9 9 9 9
CTA 5 5 5 5 5 4 | CCA 10 10 10 10 10 10 | Gln CAA 10 10 10 10 10 10 | CGA 0 0 0 0 0 0
CTG 2 2 2 2 2 4 | CCG 2 2 2 2 2 2 | CAG 13 13 13 13 13 13 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 14 14 14 13 14 13 | Thr ACT 20 20 20 19 20 20 | Asn AAT 24 24 24 23 23 23 | Ser AGT 4 4 4 4 4 4
ATC 7 7 7 8 7 8 | ACC 5 5 5 6 5 5 | AAC 6 6 6 7 8 7 | AGC 8 8 8 8 7 8
ATA 10 10 10 10 10 10 | ACA 11 11 11 11 11 11 | Lys AAA 15 15 15 16 15 14 | Arg AGA 2 2 2 2 2 2
Met ATG 9 9 9 9 9 9 | ACG 1 1 1 1 1 1 | AAG 21 21 21 20 21 22 | AGG 7 7 7 7 7 7
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 27 27 27 28 27 27 | Ala GCT 19 19 19 20 19 19 | Asp GAT 21 21 21 19 21 19 | Gly GGT 18 18 18 19 18 18
GTC 12 12 12 11 12 12 | GCC 9 9 9 8 9 9 | GAC 11 10 11 12 11 12 | GGC 6 6 6 5 6 6
GTA 4 4 4 4 4 4 | GCA 10 10 10 10 10 10 | Glu GAA 8 9 8 8 8 9 | GGA 3 3 3 3 3 3
GTG 13 13 13 13 13 13 | GCG 3 3 3 3 3 3 | GAG 13 13 13 14 13 13 | GGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 16 16 17 16 16 16 | Ser TCT 14 15 14 13 15 15 | Tyr TAT 21 22 23 21 20 22 | Cys TGT 24 23 24 23 23 23
TTC 8 8 7 8 8 8 | TCC 7 6 7 8 6 6 | TAC 9 8 7 9 10 8 | TGC 4 5 4 4 5 5
Leu TTA 5 4 5 6 5 4 | TCA 12 12 12 12 12 12 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 18 19 18 19 19 19 | TCG 1 1 1 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 4 4 4 4 4 4
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 13 13 13 12 13 13 | Pro CCT 14 13 14 14 13 13 | His CAT 10 10 9 10 10 10 | Arg CGT 13 11 12 15 12 11
CTC 2 2 2 3 2 2 | CCC 4 5 3 5 5 5 | CAC 5 5 6 5 5 5 | CGC 7 9 8 5 8 9
CTA 5 5 5 5 4 5 | CCA 10 10 11 10 10 10 | Gln CAA 10 10 10 10 10 10 | CGA 0 0 0 0 0 0
CTG 2 2 2 2 2 2 | CCG 2 2 2 1 2 2 | CAG 13 13 13 13 13 13 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 13 14 12 14 14 14 | Thr ACT 20 20 20 18 20 20 | Asn AAT 24 24 24 23 24 24 | Ser AGT 4 4 4 6 4 4
ATC 8 7 9 9 7 7 | ACC 5 5 5 6 5 5 | AAC 6 6 6 7 6 6 | AGC 8 8 8 7 8 8
ATA 10 10 10 9 10 10 | ACA 11 11 11 10 11 11 | Lys AAA 15 15 15 13 15 15 | Arg AGA 2 2 2 2 2 2
Met ATG 9 9 9 8 9 9 | ACG 1 1 1 1 1 1 | AAG 21 21 21 23 21 21 | AGG 7 7 7 7 7 7
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 27 27 28 26 27 27 | Ala GCT 20 19 21 18 18 19 | Asp GAT 19 21 18 20 21 21 | Gly GGT 19 18 19 19 18 18
GTC 12 12 11 12 12 12 | GCC 8 9 8 9 10 9 | GAC 12 11 13 11 10 11 | GGC 5 6 5 5 6 6
GTA 4 4 4 3 4 4 | GCA 10 10 10 13 10 10 | Glu GAA 8 8 8 10 9 8 | GGA 3 3 3 3 3 3
GTG 13 13 13 13 13 13 | GCG 3 3 2 3 3 3 | GAG 14 13 14 12 13 13 | GGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 16 16 17 16 16 17 | Ser TCT 15 15 14 14 15 14 | Tyr TAT 22 22 22 21 22 22 | Cys TGT 23 23 24 24 23 24
TTC 8 8 7 8 8 7 | TCC 6 6 7 7 6 7 | TAC 8 8 8 9 8 8 | TGC 5 5 4 4 5 4
Leu TTA 4 4 5 5 4 5 | TCA 12 12 12 12 12 12 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 19 19 18 18 19 18 | TCG 1 1 1 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 4 4 4 4 4 4
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 13 13 13 13 13 13 | Pro CCT 12 13 14 12 13 13 | His CAT 10 10 9 10 10 10 | Arg CGT 11 11 11 12 11 11
CTC 2 2 2 2 2 2 | CCC 6 5 3 5 5 5 | CAC 5 5 6 5 5 5 | CGC 9 9 9 8 9 9
CTA 5 5 5 4 5 5 | CCA 10 10 11 10 10 10 | Gln CAA 10 10 10 10 10 10 | CGA 0 0 0 0 0 0
CTG 2 2 2 3 2 2 | CCG 2 2 2 3 2 2 | CAG 13 13 13 13 13 13 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 14 14 12 13 14 13 | Thr ACT 20 20 20 21 20 19 | Asn AAT 24 24 23 24 24 23 | Ser AGT 4 4 4 5 4 4
ATC 7 7 9 8 7 8 | ACC 5 5 5 4 5 6 | AAC 6 6 7 6 6 7 | AGC 8 8 8 7 8 8
ATA 10 10 10 10 10 10 | ACA 11 11 11 11 11 11 | Lys AAA 15 15 16 15 15 16 | Arg AGA 2 2 2 3 2 2
Met ATG 9 9 9 9 9 9 | ACG 1 1 1 1 1 1 | AAG 21 21 20 21 21 20 | AGG 7 7 7 6 7 7
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 27 27 28 26 27 28 | Ala GCT 19 19 20 19 19 20 | Asp GAT 21 21 19 19 21 19 | Gly GGT 18 18 19 18 18 19
GTC 12 12 11 12 12 11 | GCC 9 9 8 9 9 8 | GAC 11 11 12 12 11 12 | GGC 6 6 5 6 6 5
GTA 4 4 4 5 4 4 | GCA 10 10 10 10 10 10 | Glu GAA 8 8 8 11 8 8 | GGA 3 3 3 3 3 3
GTG 13 13 13 13 13 13 | GCG 3 3 3 3 3 3 | GAG 13 13 14 11 13 14 | GGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C559
position 1: T:0.24288 C:0.18425 A:0.27471 G:0.29816
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45394 C:0.18593 A:0.17420 G:0.18593
Average T:0.32440 C:0.20268 A:0.25405 G:0.21887
#2: C370
position 1: T:0.23953 C:0.18593 A:0.27638 G:0.29816
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45226 C:0.18760 A:0.17420 G:0.18593
Average T:0.32272 C:0.20380 A:0.25461 G:0.21887
#3: C50
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45226 C:0.18593 A:0.17588 G:0.18593
Average T:0.32272 C:0.20324 A:0.25461 G:0.21943
#4: C242
position 1: T:0.23786 C:0.18760 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45729 C:0.18090 A:0.17755 G:0.18425
Average T:0.32384 C:0.20212 A:0.25516 G:0.21887
#5: C112
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45394 C:0.18425 A:0.17588 G:0.18593
Average T:0.32328 C:0.20268 A:0.25461 G:0.21943
#6: C391
position 1: T:0.23953 C:0.18425 A:0.27638 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45059 C:0.18928 A:0.17420 G:0.18593
Average T:0.32217 C:0.20380 A:0.25461 G:0.21943
#7: C385
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.44389 C:0.19263 A:0.17923 G:0.18425
Average T:0.31993 C:0.20547 A:0.25572 G:0.21887
#8: C316
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.44891 C:0.18928 A:0.17755 G:0.18425
Average T:0.32161 C:0.20436 A:0.25516 G:0.21887
#9: C263
position 1: T:0.24121 C:0.18425 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45394 C:0.18593 A:0.17588 G:0.18425
Average T:0.32384 C:0.20268 A:0.25461 G:0.21887
#10: C369
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45226 C:0.18760 A:0.17420 G:0.18593
Average T:0.32272 C:0.20380 A:0.25405 G:0.21943
#11: C66
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.44389 C:0.19095 A:0.17923 G:0.18593
Average T:0.31993 C:0.20491 A:0.25572 G:0.21943
#12: C321
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45059 C:0.18760 A:0.17755 G:0.18425
Average T:0.32217 C:0.20380 A:0.25516 G:0.21887
#13: C523
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45059 C:0.18928 A:0.17420 G:0.18593
Average T:0.32217 C:0.20436 A:0.25405 G:0.21943
#14: C463
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45226 C:0.18593 A:0.17588 G:0.18593
Average T:0.32272 C:0.20324 A:0.25461 G:0.21943
#15: C595
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45226 C:0.18760 A:0.17588 G:0.18425
Average T:0.32272 C:0.20380 A:0.25461 G:0.21887
#16: C327
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45059 C:0.18760 A:0.17755 G:0.18425
Average T:0.32217 C:0.20380 A:0.25516 G:0.21887
#17: C287
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31491 G:0.17085
position 3: T:0.45226 C:0.18760 A:0.17420 G:0.18593
Average T:0.32272 C:0.20380 A:0.25461 G:0.21887
#18: C72
position 1: T:0.23786 C:0.18760 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.44389 C:0.19430 A:0.17588 G:0.18593
Average T:0.31937 C:0.20659 A:0.25461 G:0.21943
#19: C607
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45394 C:0.18425 A:0.17588 G:0.18593
Average T:0.32328 C:0.20268 A:0.25461 G:0.21943
#20: C493
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45226 C:0.18760 A:0.17420 G:0.18593
Average T:0.32272 C:0.20380 A:0.25405 G:0.21943
#21: C240
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45561 C:0.18258 A:0.17755 G:0.18425
Average T:0.32384 C:0.20212 A:0.25516 G:0.21887
#22: C8
position 1: T:0.24121 C:0.18593 A:0.27303 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.44891 C:0.18928 A:0.17755 G:0.18425
Average T:0.32217 C:0.20436 A:0.25461 G:0.21887
#23: C130
position 1: T:0.24121 C:0.18425 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.44891 C:0.18928 A:0.17588 G:0.18593
Average T:0.32217 C:0.20380 A:0.25461 G:0.21943
#24: C23
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45226 C:0.18760 A:0.17420 G:0.18593
Average T:0.32272 C:0.20380 A:0.25405 G:0.21943
#25: C388
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45059 C:0.18928 A:0.17420 G:0.18593
Average T:0.32217 C:0.20436 A:0.25405 G:0.21943
#26: C591
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45226 C:0.18760 A:0.17420 G:0.18593
Average T:0.32272 C:0.20380 A:0.25405 G:0.21943
#27: C78
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45059 C:0.18593 A:0.17923 G:0.18425
Average T:0.32217 C:0.20324 A:0.25572 G:0.21887
#28: C392
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.44724 C:0.18760 A:0.18258 G:0.18258
Average T:0.32105 C:0.20380 A:0.25684 G:0.21831
#29: C108
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45226 C:0.18760 A:0.17420 G:0.18593
Average T:0.32272 C:0.20380 A:0.25405 G:0.21943
#30: C325
position 1: T:0.23953 C:0.18593 A:0.27471 G:0.29983
position 2: T:0.27638 C:0.23786 A:0.31323 G:0.17253
position 3: T:0.45059 C:0.18760 A:0.17755 G:0.18425
Average T:0.32217 C:0.20380 A:0.25516 G:0.21887
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 486 | Ser S TCT 434 | Tyr Y TAT 650 | Cys C TGT 698
TTC 234 | TCC 195 | TAC 250 | TGC 141
Leu L TTA 139 | TCA 362 | *** * TAA 0 | *** * TGA 0
TTG 554 | TCG 30 | TAG 0 | Trp W TGG 120
------------------------------------------------------------------------------
Leu L CTT 388 | Pro P CCT 395 | His H CAT 297 | Arg R CGT 342
CTC 61 | CCC 143 | CAC 153 | CGC 257
CTA 145 | CCA 301 | Gln Q CAA 300 | CGA 1
CTG 65 | CCG 60 | CAG 390 | CGG 30
------------------------------------------------------------------------------
Ile I ATT 408 | Thr T ACT 594 | Asn N AAT 710 | Ser S AGT 125
ATC 225 | ACC 154 | AAC 191 | AGC 235
ATA 299 | ACA 329 | Lys K AAA 455 | Arg R AGA 62
Met M ATG 269 | ACG 31 | AAG 626 | AGG 208
------------------------------------------------------------------------------
Val V GTT 819 | Ala A GCT 578 | Asp D GAT 603 | Gly G GGT 551
GTC 349 | GCC 263 | GAC 339 | GGC 169
GTA 121 | GCA 302 | Glu E GAA 250 | GGA 90
GTG 388 | GCG 89 | GAG 397 | GGG 60
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.23970 C:0.18582 A:0.27476 G:0.29972
position 2: T:0.27638 C:0.23786 A:0.31329 G:0.17247
position 3: T:0.45103 C:0.18755 A:0.17621 G:0.18520
Average T:0.32237 C:0.20374 A:0.25476 G:0.21913
Model 1: NearlyNeutral (2 categories)
TREE # 1: (12, 16, 30, 8, (((((((11, 18), (((13, 17, 26, 1, 2, 6, 10, 15, 20, 25, 24, 29), 14), 23, 9), (7, 28)), 22), (5, 19)), 4), 3), (21, 27))); MP score: 140
lnL(ntime: 43 np: 46): -3221.395556 +0.000000
31..12 31..16 31..30 31..8 31..32 32..33 33..34 34..35 35..36 36..37 37..38 38..11 38..18 37..39 39..40 40..41 41..13 41..17 41..26 41..1 41..2 41..6 41..10 41..15 41..20 41..25 41..24 41..29 40..14 39..23 39..9 37..42 42..7 42..28 36..22 35..43 43..5 43..19 34..4 33..3 32..44 44..21 44..27
0.000004 0.000004 0.000004 0.001709 0.003454 0.001701 0.008054 0.001659 0.007255 0.004030 0.007021 0.008668 0.006890 0.011895 0.005155 0.001719 0.001711 0.005146 0.000004 0.005158 0.001713 0.006876 0.000004 0.001713 0.000004 0.001712 0.000004 0.000004 0.000004 0.003425 0.005163 0.003541 0.010417 0.010409 0.077643 0.004085 0.000004 0.000004 0.019969 0.001717 0.005191 0.012100 0.000004 6.053611 0.999990 0.030725
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.246947
(12: 0.000004, 16: 0.000004, 30: 0.000004, 8: 0.001709, (((((((11: 0.008668, 18: 0.006890): 0.007021, (((13: 0.001711, 17: 0.005146, 26: 0.000004, 1: 0.005158, 2: 0.001713, 6: 0.006876, 10: 0.000004, 15: 0.001713, 20: 0.000004, 25: 0.001712, 24: 0.000004, 29: 0.000004): 0.001719, 14: 0.000004): 0.005155, 23: 0.003425, 9: 0.005163): 0.011895, (7: 0.010417, 28: 0.010409): 0.003541): 0.004030, 22: 0.077643): 0.007255, (5: 0.000004, 19: 0.000004): 0.004085): 0.001659, 4: 0.019969): 0.008054, 3: 0.001717): 0.001701, (21: 0.012100, 27: 0.000004): 0.005191): 0.003454);
(C321: 0.000004, C327: 0.000004, C325: 0.000004, C316: 0.001709, (((((((C66: 0.008668, C72: 0.006890): 0.007021, (((C523: 0.001711, C287: 0.005146, C591: 0.000004, C559: 0.005158, C370: 0.001713, C391: 0.006876, C369: 0.000004, C595: 0.001713, C493: 0.000004, C388: 0.001712, C23: 0.000004, C108: 0.000004): 0.001719, C463: 0.000004): 0.005155, C130: 0.003425, C263: 0.005163): 0.011895, (C385: 0.010417, C392: 0.010409): 0.003541): 0.004030, C8: 0.077643): 0.007255, (C112: 0.000004, C607: 0.000004): 0.004085): 0.001659, C242: 0.019969): 0.008054, C50: 0.001717): 0.001701, (C240: 0.012100, C78: 0.000004): 0.005191): 0.003454);
Detailed output identifying parameters
kappa (ts/tv) = 6.05361
MLEs of dN/dS (w) for site classes (K=2)
p: 0.99999 0.00001
w: 0.03072 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
31..16 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
31..30 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
31..8 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
31..32 0.003 1338.1 452.9 0.0307 0.0001 0.0042 0.2 1.9
32..33 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
33..34 0.008 1338.1 452.9 0.0307 0.0003 0.0097 0.4 4.4
34..35 0.002 1338.1 452.9 0.0307 0.0001 0.0020 0.1 0.9
35..36 0.007 1338.1 452.9 0.0307 0.0003 0.0088 0.4 4.0
36..37 0.004 1338.1 452.9 0.0307 0.0001 0.0049 0.2 2.2
37..38 0.007 1338.1 452.9 0.0307 0.0003 0.0085 0.3 3.8
38..11 0.009 1338.1 452.9 0.0307 0.0003 0.0105 0.4 4.7
38..18 0.007 1338.1 452.9 0.0307 0.0003 0.0083 0.3 3.8
37..39 0.012 1338.1 452.9 0.0307 0.0004 0.0144 0.6 6.5
39..40 0.005 1338.1 452.9 0.0307 0.0002 0.0062 0.3 2.8
40..41 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
41..13 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
41..17 0.005 1338.1 452.9 0.0307 0.0002 0.0062 0.3 2.8
41..26 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
41..1 0.005 1338.1 452.9 0.0307 0.0002 0.0062 0.3 2.8
41..2 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
41..6 0.007 1338.1 452.9 0.0307 0.0003 0.0083 0.3 3.8
41..10 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
41..15 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
41..20 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
41..25 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
41..24 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
41..29 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
40..14 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
39..23 0.003 1338.1 452.9 0.0307 0.0001 0.0041 0.2 1.9
39..9 0.005 1338.1 452.9 0.0307 0.0002 0.0062 0.3 2.8
37..42 0.004 1338.1 452.9 0.0307 0.0001 0.0043 0.2 1.9
42..7 0.010 1338.1 452.9 0.0307 0.0004 0.0126 0.5 5.7
42..28 0.010 1338.1 452.9 0.0307 0.0004 0.0126 0.5 5.7
36..22 0.078 1338.1 452.9 0.0307 0.0029 0.0938 3.9 42.5
35..43 0.004 1338.1 452.9 0.0307 0.0002 0.0049 0.2 2.2
43..5 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
43..19 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
34..4 0.020 1338.1 452.9 0.0307 0.0007 0.0241 1.0 10.9
33..3 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
32..44 0.005 1338.1 452.9 0.0307 0.0002 0.0063 0.3 2.8
44..21 0.012 1338.1 452.9 0.0307 0.0004 0.0146 0.6 6.6
44..27 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
Time used: 3:54
Model 2: PositiveSelection (3 categories)
TREE # 1: (12, 16, 30, 8, (((((((11, 18), (((13, 17, 26, 1, 2, 6, 10, 15, 20, 25, 24, 29), 14), 23, 9), (7, 28)), 22), (5, 19)), 4), 3), (21, 27))); MP score: 140
check convergence..
lnL(ntime: 43 np: 48): -3221.395255 +0.000000
31..12 31..16 31..30 31..8 31..32 32..33 33..34 34..35 35..36 36..37 37..38 38..11 38..18 37..39 39..40 40..41 41..13 41..17 41..26 41..1 41..2 41..6 41..10 41..15 41..20 41..25 41..24 41..29 40..14 39..23 39..9 37..42 42..7 42..28 36..22 35..43 43..5 43..19 34..4 33..3 32..44 44..21 44..27
0.000004 0.000004 0.000004 0.001709 0.003454 0.001701 0.008054 0.001658 0.007255 0.004030 0.007021 0.008668 0.006890 0.011895 0.005155 0.001718 0.001711 0.005145 0.000004 0.005157 0.001712 0.006876 0.000004 0.001712 0.000004 0.001711 0.000004 0.000004 0.000004 0.003425 0.005162 0.003541 0.010417 0.010409 0.077643 0.004085 0.000004 0.000004 0.019969 0.001717 0.005191 0.012100 0.000004 6.053695 1.000000 0.000000 0.030731 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.246938
(12: 0.000004, 16: 0.000004, 30: 0.000004, 8: 0.001709, (((((((11: 0.008668, 18: 0.006890): 0.007021, (((13: 0.001711, 17: 0.005145, 26: 0.000004, 1: 0.005157, 2: 0.001712, 6: 0.006876, 10: 0.000004, 15: 0.001712, 20: 0.000004, 25: 0.001711, 24: 0.000004, 29: 0.000004): 0.001718, 14: 0.000004): 0.005155, 23: 0.003425, 9: 0.005162): 0.011895, (7: 0.010417, 28: 0.010409): 0.003541): 0.004030, 22: 0.077643): 0.007255, (5: 0.000004, 19: 0.000004): 0.004085): 0.001658, 4: 0.019969): 0.008054, 3: 0.001717): 0.001701, (21: 0.012100, 27: 0.000004): 0.005191): 0.003454);
(C321: 0.000004, C327: 0.000004, C325: 0.000004, C316: 0.001709, (((((((C66: 0.008668, C72: 0.006890): 0.007021, (((C523: 0.001711, C287: 0.005145, C591: 0.000004, C559: 0.005157, C370: 0.001712, C391: 0.006876, C369: 0.000004, C595: 0.001712, C493: 0.000004, C388: 0.001711, C23: 0.000004, C108: 0.000004): 0.001718, C463: 0.000004): 0.005155, C130: 0.003425, C263: 0.005162): 0.011895, (C385: 0.010417, C392: 0.010409): 0.003541): 0.004030, C8: 0.077643): 0.007255, (C112: 0.000004, C607: 0.000004): 0.004085): 0.001658, C242: 0.019969): 0.008054, C50: 0.001717): 0.001701, (C240: 0.012100, C78: 0.000004): 0.005191): 0.003454);
Detailed output identifying parameters
kappa (ts/tv) = 6.05370
MLEs of dN/dS (w) for site classes (K=3)
p: 1.00000 0.00000 0.00000
w: 0.03073 1.00000 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
31..16 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
31..30 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
31..8 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
31..32 0.003 1338.1 452.9 0.0307 0.0001 0.0042 0.2 1.9
32..33 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
33..34 0.008 1338.1 452.9 0.0307 0.0003 0.0097 0.4 4.4
34..35 0.002 1338.1 452.9 0.0307 0.0001 0.0020 0.1 0.9
35..36 0.007 1338.1 452.9 0.0307 0.0003 0.0088 0.4 4.0
36..37 0.004 1338.1 452.9 0.0307 0.0001 0.0049 0.2 2.2
37..38 0.007 1338.1 452.9 0.0307 0.0003 0.0085 0.3 3.8
38..11 0.009 1338.1 452.9 0.0307 0.0003 0.0105 0.4 4.7
38..18 0.007 1338.1 452.9 0.0307 0.0003 0.0083 0.3 3.8
37..39 0.012 1338.1 452.9 0.0307 0.0004 0.0144 0.6 6.5
39..40 0.005 1338.1 452.9 0.0307 0.0002 0.0062 0.3 2.8
40..41 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
41..13 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
41..17 0.005 1338.1 452.9 0.0307 0.0002 0.0062 0.3 2.8
41..26 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
41..1 0.005 1338.1 452.9 0.0307 0.0002 0.0062 0.3 2.8
41..2 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
41..6 0.007 1338.1 452.9 0.0307 0.0003 0.0083 0.3 3.8
41..10 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
41..15 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
41..20 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
41..25 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
41..24 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
41..29 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
40..14 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
39..23 0.003 1338.1 452.9 0.0307 0.0001 0.0041 0.2 1.9
39..9 0.005 1338.1 452.9 0.0307 0.0002 0.0062 0.3 2.8
37..42 0.004 1338.1 452.9 0.0307 0.0001 0.0043 0.2 1.9
42..7 0.010 1338.1 452.9 0.0307 0.0004 0.0126 0.5 5.7
42..28 0.010 1338.1 452.9 0.0307 0.0004 0.0126 0.5 5.7
36..22 0.078 1338.1 452.9 0.0307 0.0029 0.0938 3.9 42.5
35..43 0.004 1338.1 452.9 0.0307 0.0002 0.0049 0.2 2.2
43..5 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
43..19 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
34..4 0.020 1338.1 452.9 0.0307 0.0007 0.0241 1.0 10.9
33..3 0.002 1338.1 452.9 0.0307 0.0001 0.0021 0.1 0.9
32..44 0.005 1338.1 452.9 0.0307 0.0002 0.0063 0.3 2.8
44..21 0.012 1338.1 452.9 0.0307 0.0004 0.0146 0.6 6.6
44..27 0.000 1338.1 452.9 0.0307 0.0000 0.0000 0.0 0.0
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C559)
Pr(w>1) post mean +- SE for w
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.956 0.039 0.004 0.001 0.000 0.000 0.000 0.000 0.000 0.000
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
sum of density on p0-p1 = 1.000000
Time used: 13:26
Model 7: beta (10 categories)
TREE # 1: (12, 16, 30, 8, (((((((11, 18), (((13, 17, 26, 1, 2, 6, 10, 15, 20, 25, 24, 29), 14), 23, 9), (7, 28)), 22), (5, 19)), 4), 3), (21, 27))); MP score: 140
lnL(ntime: 43 np: 46): -3221.404719 +0.000000
31..12 31..16 31..30 31..8 31..32 32..33 33..34 34..35 35..36 36..37 37..38 38..11 38..18 37..39 39..40 40..41 41..13 41..17 41..26 41..1 41..2 41..6 41..10 41..15 41..20 41..25 41..24 41..29 40..14 39..23 39..9 37..42 42..7 42..28 36..22 35..43 43..5 43..19 34..4 33..3 32..44 44..21 44..27
0.000004 0.000004 0.000004 0.001709 0.003455 0.001701 0.008055 0.001659 0.007256 0.004031 0.007022 0.008670 0.006891 0.011897 0.005156 0.001719 0.001712 0.005146 0.000004 0.005158 0.001713 0.006878 0.000004 0.001713 0.000004 0.001712 0.000004 0.000004 0.000004 0.003426 0.005164 0.003542 0.010418 0.010411 0.077663 0.004086 0.000004 0.000004 0.019972 0.001717 0.005192 0.012102 0.000004 6.061925 3.189402 99.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.246995
(12: 0.000004, 16: 0.000004, 30: 0.000004, 8: 0.001709, (((((((11: 0.008670, 18: 0.006891): 0.007022, (((13: 0.001712, 17: 0.005146, 26: 0.000004, 1: 0.005158, 2: 0.001713, 6: 0.006878, 10: 0.000004, 15: 0.001713, 20: 0.000004, 25: 0.001712, 24: 0.000004, 29: 0.000004): 0.001719, 14: 0.000004): 0.005156, 23: 0.003426, 9: 0.005164): 0.011897, (7: 0.010418, 28: 0.010411): 0.003542): 0.004031, 22: 0.077663): 0.007256, (5: 0.000004, 19: 0.000004): 0.004086): 0.001659, 4: 0.019972): 0.008055, 3: 0.001717): 0.001701, (21: 0.012102, 27: 0.000004): 0.005192): 0.003455);
(C321: 0.000004, C327: 0.000004, C325: 0.000004, C316: 0.001709, (((((((C66: 0.008670, C72: 0.006891): 0.007022, (((C523: 0.001712, C287: 0.005146, C591: 0.000004, C559: 0.005158, C370: 0.001713, C391: 0.006878, C369: 0.000004, C595: 0.001713, C493: 0.000004, C388: 0.001712, C23: 0.000004, C108: 0.000004): 0.001719, C463: 0.000004): 0.005156, C130: 0.003426, C263: 0.005164): 0.011897, (C385: 0.010418, C392: 0.010411): 0.003542): 0.004031, C8: 0.077663): 0.007256, (C112: 0.000004, C607: 0.000004): 0.004086): 0.001659, C242: 0.019972): 0.008055, C50: 0.001717): 0.001701, (C240: 0.012102, C78: 0.000004): 0.005192): 0.003455);
Detailed output identifying parameters
kappa (ts/tv) = 6.06193
Parameters in M7 (beta):
p = 3.18940 q = 99.00000
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00911 0.01449 0.01859 0.02238 0.02620 0.03029 0.03493 0.04060 0.04846 0.06361
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.000 1338.0 453.0 0.0309 0.0000 0.0000 0.0 0.0
31..16 0.000 1338.0 453.0 0.0309 0.0000 0.0000 0.0 0.0
31..30 0.000 1338.0 453.0 0.0309 0.0000 0.0000 0.0 0.0
31..8 0.002 1338.0 453.0 0.0309 0.0001 0.0021 0.1 0.9
31..32 0.003 1338.0 453.0 0.0309 0.0001 0.0042 0.2 1.9
32..33 0.002 1338.0 453.0 0.0309 0.0001 0.0021 0.1 0.9
33..34 0.008 1338.0 453.0 0.0309 0.0003 0.0097 0.4 4.4
34..35 0.002 1338.0 453.0 0.0309 0.0001 0.0020 0.1 0.9
35..36 0.007 1338.0 453.0 0.0309 0.0003 0.0088 0.4 4.0
36..37 0.004 1338.0 453.0 0.0309 0.0002 0.0049 0.2 2.2
37..38 0.007 1338.0 453.0 0.0309 0.0003 0.0085 0.4 3.8
38..11 0.009 1338.0 453.0 0.0309 0.0003 0.0105 0.4 4.7
38..18 0.007 1338.0 453.0 0.0309 0.0003 0.0083 0.3 3.8
37..39 0.012 1338.0 453.0 0.0309 0.0004 0.0144 0.6 6.5
39..40 0.005 1338.0 453.0 0.0309 0.0002 0.0062 0.3 2.8
40..41 0.002 1338.0 453.0 0.0309 0.0001 0.0021 0.1 0.9
41..13 0.002 1338.0 453.0 0.0309 0.0001 0.0021 0.1 0.9
41..17 0.005 1338.0 453.0 0.0309 0.0002 0.0062 0.3 2.8
41..26 0.000 1338.0 453.0 0.0309 0.0000 0.0000 0.0 0.0
41..1 0.005 1338.0 453.0 0.0309 0.0002 0.0062 0.3 2.8
41..2 0.002 1338.0 453.0 0.0309 0.0001 0.0021 0.1 0.9
41..6 0.007 1338.0 453.0 0.0309 0.0003 0.0083 0.3 3.8
41..10 0.000 1338.0 453.0 0.0309 0.0000 0.0000 0.0 0.0
41..15 0.002 1338.0 453.0 0.0309 0.0001 0.0021 0.1 0.9
41..20 0.000 1338.0 453.0 0.0309 0.0000 0.0000 0.0 0.0
41..25 0.002 1338.0 453.0 0.0309 0.0001 0.0021 0.1 0.9
41..24 0.000 1338.0 453.0 0.0309 0.0000 0.0000 0.0 0.0
41..29 0.000 1338.0 453.0 0.0309 0.0000 0.0000 0.0 0.0
40..14 0.000 1338.0 453.0 0.0309 0.0000 0.0000 0.0 0.0
39..23 0.003 1338.0 453.0 0.0309 0.0001 0.0041 0.2 1.9
39..9 0.005 1338.0 453.0 0.0309 0.0002 0.0062 0.3 2.8
37..42 0.004 1338.0 453.0 0.0309 0.0001 0.0043 0.2 1.9
42..7 0.010 1338.0 453.0 0.0309 0.0004 0.0126 0.5 5.7
42..28 0.010 1338.0 453.0 0.0309 0.0004 0.0126 0.5 5.7
36..22 0.078 1338.0 453.0 0.0309 0.0029 0.0938 3.9 42.5
35..43 0.004 1338.0 453.0 0.0309 0.0002 0.0049 0.2 2.2
43..5 0.000 1338.0 453.0 0.0309 0.0000 0.0000 0.0 0.0
43..19 0.000 1338.0 453.0 0.0309 0.0000 0.0000 0.0 0.0
34..4 0.020 1338.0 453.0 0.0309 0.0007 0.0241 1.0 10.9
33..3 0.002 1338.0 453.0 0.0309 0.0001 0.0021 0.1 0.9
32..44 0.005 1338.0 453.0 0.0309 0.0002 0.0063 0.3 2.8
44..21 0.012 1338.0 453.0 0.0309 0.0005 0.0146 0.6 6.6
44..27 0.000 1338.0 453.0 0.0309 0.0000 0.0000 0.0 0.0
Time used: 43:50
Model 8: beta&w>1 (11 categories)
TREE # 1: (12, 16, 30, 8, (((((((11, 18), (((13, 17, 26, 1, 2, 6, 10, 15, 20, 25, 24, 29), 14), 23, 9), (7, 28)), 22), (5, 19)), 4), 3), (21, 27))); MP score: 140
lnL(ntime: 43 np: 48): -3221.406544 +0.000000
31..12 31..16 31..30 31..8 31..32 32..33 33..34 34..35 35..36 36..37 37..38 38..11 38..18 37..39 39..40 40..41 41..13 41..17 41..26 41..1 41..2 41..6 41..10 41..15 41..20 41..25 41..24 41..29 40..14 39..23 39..9 37..42 42..7 42..28 36..22 35..43 43..5 43..19 34..4 33..3 32..44 44..21 44..27
0.000004 0.000004 0.000004 0.001710 0.003455 0.001701 0.008058 0.001660 0.007256 0.004029 0.007024 0.008668 0.006892 0.011897 0.005156 0.001719 0.001712 0.005146 0.000004 0.005159 0.001716 0.006877 0.000004 0.001713 0.000004 0.001712 0.000004 0.000004 0.000004 0.003424 0.005167 0.003542 0.010416 0.010411 0.077644 0.004085 0.000004 0.000004 0.019970 0.001718 0.005191 0.012110 0.000004 6.003792 0.999990 3.224044 99.000000 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.246987
(12: 0.000004, 16: 0.000004, 30: 0.000004, 8: 0.001710, (((((((11: 0.008668, 18: 0.006892): 0.007024, (((13: 0.001712, 17: 0.005146, 26: 0.000004, 1: 0.005159, 2: 0.001716, 6: 0.006877, 10: 0.000004, 15: 0.001713, 20: 0.000004, 25: 0.001712, 24: 0.000004, 29: 0.000004): 0.001719, 14: 0.000004): 0.005156, 23: 0.003424, 9: 0.005167): 0.011897, (7: 0.010416, 28: 0.010411): 0.003542): 0.004029, 22: 0.077644): 0.007256, (5: 0.000004, 19: 0.000004): 0.004085): 0.001660, 4: 0.019970): 0.008058, 3: 0.001718): 0.001701, (21: 0.012110, 27: 0.000004): 0.005191): 0.003455);
(C321: 0.000004, C327: 0.000004, C325: 0.000004, C316: 0.001710, (((((((C66: 0.008668, C72: 0.006892): 0.007024, (((C523: 0.001712, C287: 0.005146, C591: 0.000004, C559: 0.005159, C370: 0.001716, C391: 0.006877, C369: 0.000004, C595: 0.001713, C493: 0.000004, C388: 0.001712, C23: 0.000004, C108: 0.000004): 0.001719, C463: 0.000004): 0.005156, C130: 0.003424, C263: 0.005167): 0.011897, (C385: 0.010416, C392: 0.010411): 0.003542): 0.004029, C8: 0.077644): 0.007256, (C112: 0.000004, C607: 0.000004): 0.004085): 0.001660, C242: 0.019970): 0.008058, C50: 0.001718): 0.001701, (C240: 0.012110, C78: 0.000004): 0.005191): 0.003455);
Detailed output identifying parameters
kappa (ts/tv) = 6.00379
Parameters in M8 (beta&w>1):
p0 = 0.99999 p = 3.22404 q = 99.00000
(p1 = 0.00001) w = 1.00000
MLEs of dN/dS (w) for site classes (K=11)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.00001
w: 0.00929 0.01473 0.01885 0.02268 0.02652 0.03063 0.03529 0.04099 0.04888 0.06408 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.000 1338.5 452.5 0.0312 0.0000 0.0000 0.0 0.0
31..16 0.000 1338.5 452.5 0.0312 0.0000 0.0000 0.0 0.0
31..30 0.000 1338.5 452.5 0.0312 0.0000 0.0000 0.0 0.0
31..8 0.002 1338.5 452.5 0.0312 0.0001 0.0021 0.1 0.9
31..32 0.003 1338.5 452.5 0.0312 0.0001 0.0042 0.2 1.9
32..33 0.002 1338.5 452.5 0.0312 0.0001 0.0021 0.1 0.9
33..34 0.008 1338.5 452.5 0.0312 0.0003 0.0097 0.4 4.4
34..35 0.002 1338.5 452.5 0.0312 0.0001 0.0020 0.1 0.9
35..36 0.007 1338.5 452.5 0.0312 0.0003 0.0088 0.4 4.0
36..37 0.004 1338.5 452.5 0.0312 0.0002 0.0049 0.2 2.2
37..38 0.007 1338.5 452.5 0.0312 0.0003 0.0085 0.4 3.8
38..11 0.009 1338.5 452.5 0.0312 0.0003 0.0105 0.4 4.7
38..18 0.007 1338.5 452.5 0.0312 0.0003 0.0083 0.3 3.8
37..39 0.012 1338.5 452.5 0.0312 0.0004 0.0144 0.6 6.5
39..40 0.005 1338.5 452.5 0.0312 0.0002 0.0062 0.3 2.8
40..41 0.002 1338.5 452.5 0.0312 0.0001 0.0021 0.1 0.9
41..13 0.002 1338.5 452.5 0.0312 0.0001 0.0021 0.1 0.9
41..17 0.005 1338.5 452.5 0.0312 0.0002 0.0062 0.3 2.8
41..26 0.000 1338.5 452.5 0.0312 0.0000 0.0000 0.0 0.0
41..1 0.005 1338.5 452.5 0.0312 0.0002 0.0062 0.3 2.8
41..2 0.002 1338.5 452.5 0.0312 0.0001 0.0021 0.1 0.9
41..6 0.007 1338.5 452.5 0.0312 0.0003 0.0083 0.3 3.8
41..10 0.000 1338.5 452.5 0.0312 0.0000 0.0000 0.0 0.0
41..15 0.002 1338.5 452.5 0.0312 0.0001 0.0021 0.1 0.9
41..20 0.000 1338.5 452.5 0.0312 0.0000 0.0000 0.0 0.0
41..25 0.002 1338.5 452.5 0.0312 0.0001 0.0021 0.1 0.9
41..24 0.000 1338.5 452.5 0.0312 0.0000 0.0000 0.0 0.0
41..29 0.000 1338.5 452.5 0.0312 0.0000 0.0000 0.0 0.0
40..14 0.000 1338.5 452.5 0.0312 0.0000 0.0000 0.0 0.0
39..23 0.003 1338.5 452.5 0.0312 0.0001 0.0041 0.2 1.9
39..9 0.005 1338.5 452.5 0.0312 0.0002 0.0062 0.3 2.8
37..42 0.004 1338.5 452.5 0.0312 0.0001 0.0043 0.2 1.9
42..7 0.010 1338.5 452.5 0.0312 0.0004 0.0126 0.5 5.7
42..28 0.010 1338.5 452.5 0.0312 0.0004 0.0126 0.5 5.7
36..22 0.078 1338.5 452.5 0.0312 0.0029 0.0938 3.9 42.4
35..43 0.004 1338.5 452.5 0.0312 0.0002 0.0049 0.2 2.2
43..5 0.000 1338.5 452.5 0.0312 0.0000 0.0000 0.0 0.0
43..19 0.000 1338.5 452.5 0.0312 0.0000 0.0000 0.0 0.0
34..4 0.020 1338.5 452.5 0.0312 0.0008 0.0241 1.0 10.9
33..3 0.002 1338.5 452.5 0.0312 0.0001 0.0021 0.1 0.9
32..44 0.005 1338.5 452.5 0.0312 0.0002 0.0063 0.3 2.8
44..21 0.012 1338.5 452.5 0.0312 0.0005 0.0146 0.6 6.6
44..27 0.000 1338.5 452.5 0.0312 0.0000 0.0000 0.0 0.0
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C559)
Pr(w>1) post mean +- SE for w
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.000 0.000 0.000 0.007 0.048 0.219 0.726
ws: 0.993 0.007 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
Time used: 1:23:56
Model 1: NearlyNeutral -3221.395556 Model 2: PositiveSelection -3221.395255 Model 7: beta -3221.404719 Model 8: beta&w>1 -3221.406544 Model 2 vs 1 .000602 Model 8 vs 7 -.003650
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
