--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -10230.04 -10264.37
2 -10230.06 -10258.41
--------------------------------------
TOTAL -10230.05 -10263.68
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.118643 0.000047 0.104942 0.131673 0.118511 1279.32 1357.44 1.001
r(A<->C){all} 0.076314 0.000189 0.050922 0.103996 0.075602 948.91 998.37 1.001
r(A<->G){all} 0.222771 0.000474 0.183554 0.268110 0.221507 838.04 858.09 1.000
r(A<->T){all} 0.023826 0.000037 0.013240 0.036373 0.023271 999.50 1040.33 1.000
r(C<->G){all} 0.011610 0.000037 0.001383 0.022895 0.010618 705.95 712.37 1.000
r(C<->T){all} 0.576935 0.000633 0.527310 0.624378 0.577893 886.11 908.48 1.001
r(G<->T){all} 0.088544 0.000130 0.065747 0.110589 0.088096 984.99 1042.93 1.000
pi(A){all} 0.245752 0.000038 0.233702 0.257669 0.245550 690.01 869.77 1.000
pi(C){all} 0.172734 0.000027 0.162896 0.183139 0.172551 1053.81 1105.18 1.000
pi(G){all} 0.230572 0.000037 0.219431 0.243365 0.230578 846.88 916.09 1.000
pi(T){all} 0.350942 0.000046 0.337638 0.364155 0.350899 851.31 977.12 1.000
alpha{1,2} 0.474109 0.055085 0.131803 0.985916 0.429355 860.13 992.73 1.000
alpha{3} 1.671603 0.905650 0.343346 3.569141 1.450952 691.23 709.12 1.000
pinvar{all} 0.576425 0.006802 0.407885 0.716311 0.592711 566.36 684.03 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -9792.772830
Model 2: PositiveSelection -9791.660893
Model 7: beta -9793.503225
Model 8: beta&w>1 -9791.238655
Model 2 vs 1 2.223874
Model 8 vs 7 4.529140
-- Starting log on Thu Nov 17 16:36:59 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_nsp1_VIPR_ALG4_672096717_2978_7843_1_2012_02_China_Unknown_PEDV.result--
-- Starting log on Thu Nov 17 16:51:09 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_nsp1_VIPR_ALG4_672096717_2978_7843_1_2012_02_China_Unknown_PEDV.result--
-- Starting log on Fri Nov 18 01:33:02 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/LZW_nsp1_VIPR_ALG4_672096717_2978_7843_1_2012_02_China_Unknown_PEDV.result/gapped_alignment/codeml,LZW_nsp1_VIPR_ALG4_672096717_2978_7843_1_2012_02_China_Unknown_PEDV.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 30 taxa and 4866 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C321
Taxon 2 -> C66
Taxon 3 -> C208
Taxon 4 -> C242
Taxon 5 -> C327
Taxon 6 -> C72
Taxon 7 -> C492
Taxon 8 -> C225
Taxon 9 -> C78
Taxon 10 -> C290
Taxon 11 -> C197
Taxon 12 -> C604
Taxon 13 -> C316
Taxon 14 -> C544
Taxon 15 -> C556
Taxon 16 -> C370
Taxon 17 -> C76
Taxon 18 -> C112
Taxon 19 -> C58
Taxon 20 -> C596
Taxon 21 -> C147
Taxon 22 -> C580
Taxon 23 -> C433
Taxon 24 -> C592
Taxon 25 -> C388
Taxon 26 -> C130
Taxon 27 -> C312
Taxon 28 -> C218
Taxon 29 -> C136
Taxon 30 -> C456
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668735184
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 376824503
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 1132902276
Seed = 2119824213
Swapseed = 1668735184
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 77 unique site patterns
Division 2 has 71 unique site patterns
Division 3 has 173 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -15135.749891 -- 82.122948
Chain 2 -- -15840.125616 -- 82.122948
Chain 3 -- -15513.592946 -- 82.122948
Chain 4 -- -15619.429014 -- 82.122948
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -15806.612715 -- 82.122948
Chain 2 -- -15738.744339 -- 82.122948
Chain 3 -- -15529.448723 -- 82.122948
Chain 4 -- -15729.986474 -- 82.122948
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-15135.750] (-15840.126) (-15513.593) (-15619.429) * [-15806.613] (-15738.744) (-15529.449) (-15729.986)
1000 -- (-10639.612) (-10569.507) [-10532.260] (-10629.090) * (-10542.531) (-10710.295) [-10514.051] (-10585.541) -- 0:49:57
2000 -- (-10497.040) (-10424.193) [-10322.411] (-10431.980) * [-10317.391] (-10457.545) (-10420.497) (-10405.197) -- 0:49:54
3000 -- (-10484.972) (-10352.365) [-10272.253] (-10313.166) * [-10289.744] (-10359.592) (-10359.948) (-10376.697) -- 0:49:51
4000 -- (-10415.867) (-10339.933) (-10253.965) [-10272.195] * (-10272.303) (-10287.755) [-10272.087] (-10314.938) -- 0:45:39
5000 -- (-10312.665) (-10299.862) [-10242.902] (-10284.625) * [-10265.624] (-10292.654) (-10260.526) (-10306.596) -- 0:46:26
Average standard deviation of split frequencies: 0.072748
6000 -- (-10300.067) (-10249.919) [-10239.227] (-10269.170) * (-10258.849) (-10273.482) [-10252.418] (-10275.972) -- 0:44:10
7000 -- (-10263.111) (-10251.467) [-10237.466] (-10270.957) * (-10251.538) [-10248.924] (-10262.366) (-10266.419) -- 0:42:33
8000 -- (-10247.557) [-10251.863] (-10249.757) (-10243.236) * [-10244.848] (-10246.262) (-10250.078) (-10268.191) -- 0:41:20
9000 -- [-10235.414] (-10244.662) (-10254.627) (-10249.205) * (-10255.200) [-10249.462] (-10246.670) (-10251.668) -- 0:40:22
10000 -- [-10236.873] (-10249.164) (-10262.001) (-10258.683) * (-10256.762) (-10257.493) (-10241.519) [-10233.650] -- 0:39:36
Average standard deviation of split frequencies: 0.060609
11000 -- [-10242.360] (-10247.037) (-10245.101) (-10253.543) * (-10261.211) (-10239.073) [-10231.590] (-10255.956) -- 0:40:27
12000 -- [-10243.347] (-10247.205) (-10242.893) (-10257.944) * (-10243.500) [-10235.670] (-10247.354) (-10247.613) -- 0:39:47
13000 -- (-10257.386) [-10228.729] (-10245.717) (-10239.396) * (-10233.993) (-10234.675) (-10249.860) [-10238.034] -- 0:39:13
14000 -- [-10244.883] (-10239.449) (-10239.462) (-10245.412) * (-10242.986) (-10238.912) (-10253.341) [-10238.375] -- 0:38:44
15000 -- [-10229.954] (-10259.649) (-10241.667) (-10248.865) * [-10241.028] (-10249.551) (-10249.229) (-10248.568) -- 0:38:18
Average standard deviation of split frequencies: 0.052723
16000 -- (-10252.916) (-10243.582) [-10245.654] (-10251.844) * (-10262.523) [-10238.361] (-10260.656) (-10244.333) -- 0:37:55
17000 -- (-10257.928) [-10239.662] (-10253.720) (-10239.590) * (-10251.915) [-10240.994] (-10242.348) (-10240.557) -- 0:37:35
18000 -- (-10247.198) (-10257.822) [-10233.987] (-10248.386) * [-10230.879] (-10257.708) (-10253.581) (-10261.000) -- 0:37:16
19000 -- (-10242.637) [-10244.084] (-10245.551) (-10248.218) * (-10247.834) (-10246.010) (-10259.106) [-10240.944] -- 0:37:00
20000 -- (-10243.489) [-10245.238] (-10246.320) (-10257.354) * (-10251.966) (-10252.655) (-10238.126) [-10238.900] -- 0:36:45
Average standard deviation of split frequencies: 0.046067
21000 -- [-10242.586] (-10239.712) (-10254.474) (-10250.177) * (-10254.786) (-10257.128) [-10237.958] (-10243.594) -- 0:36:31
22000 -- (-10259.387) [-10238.333] (-10245.083) (-10264.710) * (-10246.736) (-10250.501) [-10241.478] (-10248.549) -- 0:37:02
23000 -- (-10257.218) (-10248.346) [-10239.488] (-10251.755) * (-10242.089) (-10258.639) (-10241.441) [-10239.563] -- 0:36:48
24000 -- (-10264.833) (-10262.334) (-10234.478) [-10256.309] * [-10236.878] (-10250.963) (-10262.152) (-10245.132) -- 0:36:36
25000 -- (-10241.588) (-10243.559) [-10247.567] (-10259.718) * (-10239.795) (-10248.477) [-10241.148] (-10241.158) -- 0:36:24
Average standard deviation of split frequencies: 0.033884
26000 -- (-10247.276) (-10258.775) (-10232.099) [-10251.863] * (-10254.439) (-10240.415) [-10243.314] (-10255.055) -- 0:36:12
27000 -- [-10248.018] (-10248.941) (-10245.139) (-10260.533) * (-10264.584) (-10238.618) (-10247.442) [-10239.945] -- 0:36:02
28000 -- [-10237.234] (-10250.456) (-10252.765) (-10246.420) * (-10264.055) [-10235.523] (-10242.187) (-10248.151) -- 0:35:52
29000 -- (-10248.621) (-10238.108) (-10255.423) [-10234.285] * (-10244.198) (-10244.514) [-10238.345] (-10245.690) -- 0:35:42
30000 -- [-10231.964] (-10264.215) (-10250.301) (-10240.862) * (-10251.211) [-10241.783] (-10239.463) (-10254.756) -- 0:35:34
Average standard deviation of split frequencies: 0.031274
31000 -- [-10238.582] (-10252.021) (-10240.353) (-10249.053) * (-10243.051) (-10250.570) (-10243.837) [-10240.633] -- 0:35:25
32000 -- [-10233.050] (-10245.370) (-10245.210) (-10243.281) * (-10268.705) [-10238.383] (-10250.324) (-10241.297) -- 0:35:17
33000 -- (-10241.810) [-10243.222] (-10254.229) (-10252.065) * (-10240.463) (-10250.529) [-10245.961] (-10252.319) -- 0:35:09
34000 -- (-10249.906) (-10251.429) (-10251.643) [-10243.272] * (-10236.593) (-10253.058) (-10251.809) [-10234.505] -- 0:35:02
35000 -- [-10255.737] (-10246.949) (-10248.288) (-10249.803) * [-10237.931] (-10239.940) (-10244.149) (-10253.513) -- 0:35:23
Average standard deviation of split frequencies: 0.023966
36000 -- (-10259.314) (-10241.734) [-10241.972] (-10252.843) * (-10237.032) (-10247.139) (-10253.526) [-10242.220] -- 0:35:15
37000 -- (-10266.044) (-10249.995) [-10243.789] (-10251.287) * (-10262.536) [-10237.944] (-10241.744) (-10246.308) -- 0:35:08
38000 -- (-10261.250) [-10237.104] (-10242.181) (-10251.335) * (-10267.520) (-10259.177) [-10251.725] (-10241.053) -- 0:35:01
39000 -- (-10249.662) (-10240.649) (-10251.156) [-10247.629] * (-10270.249) (-10240.046) (-10260.148) [-10255.652] -- 0:34:54
40000 -- (-10256.863) (-10249.448) [-10245.866] (-10238.130) * (-10243.010) [-10232.722] (-10245.737) (-10257.213) -- 0:34:48
Average standard deviation of split frequencies: 0.024496
41000 -- (-10248.184) (-10256.854) (-10248.263) [-10239.783] * (-10250.307) [-10239.548] (-10244.569) (-10252.080) -- 0:34:41
42000 -- (-10250.859) (-10258.633) [-10227.266] (-10242.704) * (-10246.421) (-10249.694) [-10244.016] (-10243.625) -- 0:34:35
43000 -- (-10244.045) (-10249.411) [-10232.253] (-10242.462) * (-10251.799) (-10239.031) (-10260.570) [-10245.830] -- 0:34:29
44000 -- [-10235.636] (-10255.637) (-10252.425) (-10250.406) * (-10255.271) [-10241.531] (-10242.291) (-10248.895) -- 0:34:24
45000 -- [-10239.445] (-10253.858) (-10239.695) (-10243.728) * (-10240.547) (-10235.194) [-10241.242] (-10247.426) -- 0:34:39
Average standard deviation of split frequencies: 0.025710
46000 -- [-10239.437] (-10247.549) (-10240.099) (-10253.260) * (-10265.588) (-10246.853) (-10260.138) [-10236.031] -- 0:34:33
47000 -- (-10245.623) (-10242.594) [-10235.977] (-10253.299) * (-10257.084) (-10240.059) (-10239.047) [-10244.108] -- 0:34:28
48000 -- (-10246.945) (-10268.661) [-10248.837] (-10265.121) * [-10250.285] (-10247.041) (-10251.734) (-10245.758) -- 0:34:22
49000 -- (-10245.360) (-10241.095) (-10236.723) [-10241.603] * (-10254.490) (-10248.111) [-10246.929] (-10260.013) -- 0:34:17
50000 -- [-10240.396] (-10243.884) (-10259.092) (-10251.084) * (-10258.129) [-10249.693] (-10237.915) (-10253.176) -- 0:34:12
Average standard deviation of split frequencies: 0.022119
51000 -- (-10261.246) (-10237.035) (-10245.541) [-10242.877] * (-10267.535) (-10249.916) [-10248.007] (-10245.003) -- 0:34:06
52000 -- [-10245.177] (-10239.841) (-10255.102) (-10246.235) * (-10251.278) (-10245.929) [-10243.788] (-10244.031) -- 0:34:01
53000 -- (-10242.466) (-10237.031) (-10254.700) [-10246.081] * (-10241.934) (-10246.131) (-10262.711) [-10243.135] -- 0:33:56
54000 -- (-10255.145) [-10227.427] (-10260.790) (-10231.470) * (-10249.031) (-10255.033) (-10252.982) [-10243.205] -- 0:34:09
55000 -- [-10252.759] (-10248.092) (-10241.679) (-10240.347) * (-10235.979) (-10256.156) [-10245.987] (-10234.148) -- 0:34:04
Average standard deviation of split frequencies: 0.023603
56000 -- (-10249.223) [-10244.247] (-10246.560) (-10255.346) * [-10243.479] (-10260.765) (-10246.372) (-10256.934) -- 0:33:59
57000 -- [-10231.388] (-10250.393) (-10257.278) (-10247.738) * [-10238.499] (-10266.712) (-10257.864) (-10246.560) -- 0:33:54
58000 -- (-10241.761) (-10248.474) (-10243.994) [-10240.655] * (-10243.286) [-10233.196] (-10262.070) (-10251.726) -- 0:34:06
59000 -- (-10256.458) (-10262.154) [-10234.099] (-10245.812) * (-10240.431) [-10232.930] (-10247.515) (-10240.859) -- 0:34:17
60000 -- (-10256.353) (-10240.340) (-10247.253) [-10232.165] * (-10239.806) [-10241.085] (-10241.608) (-10262.544) -- 0:34:28
Average standard deviation of split frequencies: 0.024631
61000 -- (-10250.622) (-10246.300) (-10254.424) [-10238.634] * (-10245.408) (-10245.834) [-10232.893] (-10245.357) -- 0:34:53
62000 -- (-10239.236) (-10262.524) (-10253.083) [-10229.338] * (-10254.522) [-10236.102] (-10234.949) (-10246.163) -- 0:35:02
63000 -- [-10245.915] (-10254.021) (-10241.814) (-10252.180) * (-10249.075) (-10233.615) [-10235.638] (-10249.800) -- 0:35:11
64000 -- (-10250.306) (-10242.647) [-10251.900] (-10248.429) * (-10246.388) [-10236.825] (-10255.195) (-10260.977) -- 0:35:20
65000 -- [-10242.410] (-10249.574) (-10251.097) (-10247.548) * [-10246.491] (-10239.345) (-10261.162) (-10253.838) -- 0:35:28
Average standard deviation of split frequencies: 0.019676
66000 -- (-10249.570) [-10232.878] (-10238.283) (-10246.687) * (-10245.121) (-10230.035) (-10258.362) [-10240.944] -- 0:35:51
67000 -- (-10245.785) [-10219.764] (-10250.047) (-10258.269) * (-10252.465) (-10247.927) (-10253.015) [-10244.603] -- 0:35:58
68000 -- (-10248.538) (-10234.586) [-10238.144] (-10249.948) * (-10248.799) [-10241.957] (-10234.088) (-10248.235) -- 0:36:05
69000 -- (-10253.359) (-10239.312) [-10236.413] (-10244.761) * (-10259.385) (-10250.707) [-10237.316] (-10256.589) -- 0:36:12
70000 -- (-10238.085) [-10239.034] (-10240.658) (-10251.667) * (-10247.930) (-10256.946) [-10237.458] (-10236.949) -- 0:36:18
Average standard deviation of split frequencies: 0.020012
71000 -- [-10233.135] (-10236.199) (-10252.167) (-10247.204) * (-10244.811) (-10253.502) (-10249.346) [-10231.732] -- 0:36:25
72000 -- [-10241.077] (-10238.145) (-10253.031) (-10254.266) * (-10241.662) [-10254.068] (-10240.414) (-10245.870) -- 0:36:44
73000 -- [-10243.275] (-10234.272) (-10256.570) (-10269.603) * (-10241.857) (-10242.340) [-10240.934] (-10256.456) -- 0:36:49
74000 -- [-10240.925] (-10233.933) (-10236.653) (-10248.086) * (-10250.183) (-10245.141) (-10237.896) [-10244.304] -- 0:36:54
75000 -- [-10242.563] (-10247.840) (-10259.202) (-10238.486) * (-10255.767) [-10253.953] (-10248.073) (-10248.379) -- 0:37:00
Average standard deviation of split frequencies: 0.017555
76000 -- (-10251.648) (-10242.823) (-10257.687) [-10238.720] * [-10240.952] (-10246.377) (-10261.979) (-10247.877) -- 0:37:04
77000 -- (-10268.869) (-10237.658) (-10262.823) [-10237.796] * (-10248.064) (-10250.006) (-10244.071) [-10238.063] -- 0:37:09
78000 -- (-10263.808) [-10233.498] (-10257.191) (-10252.389) * (-10242.663) [-10233.858] (-10246.093) (-10242.904) -- 0:37:25
79000 -- (-10262.553) [-10240.197] (-10265.580) (-10246.979) * [-10235.765] (-10239.683) (-10257.749) (-10263.557) -- 0:37:30
80000 -- (-10252.315) (-10244.904) (-10259.173) [-10243.410] * [-10224.949] (-10241.041) (-10249.922) (-10249.045) -- 0:37:34
Average standard deviation of split frequencies: 0.018563
81000 -- (-10253.851) [-10237.322] (-10250.414) (-10252.514) * (-10235.219) [-10232.897] (-10252.492) (-10263.164) -- 0:37:37
82000 -- (-10242.035) [-10237.150] (-10251.165) (-10235.931) * (-10248.708) [-10235.264] (-10252.566) (-10260.635) -- 0:37:52
83000 -- [-10261.013] (-10263.363) (-10261.922) (-10254.168) * (-10237.994) [-10236.054] (-10249.469) (-10263.713) -- 0:37:55
84000 -- (-10280.435) (-10267.127) [-10229.544] (-10240.109) * (-10234.589) [-10242.248] (-10252.168) (-10260.071) -- 0:37:59
85000 -- (-10271.024) (-10255.727) (-10240.992) [-10235.981] * (-10247.451) [-10241.259] (-10241.957) (-10254.928) -- 0:38:02
Average standard deviation of split frequencies: 0.019534
86000 -- (-10273.289) [-10238.807] (-10251.208) (-10237.859) * (-10244.391) (-10240.443) (-10247.692) [-10236.624] -- 0:37:54
87000 -- (-10251.851) [-10239.121] (-10251.170) (-10252.488) * (-10267.131) (-10246.222) [-10247.292] (-10248.005) -- 0:37:46
88000 -- (-10261.076) [-10235.807] (-10247.123) (-10241.833) * (-10257.790) (-10255.405) [-10237.304] (-10245.696) -- 0:37:39
89000 -- (-10237.844) [-10232.518] (-10272.027) (-10248.505) * (-10257.301) (-10261.982) (-10252.546) [-10237.795] -- 0:37:31
90000 -- (-10233.317) [-10235.169] (-10253.930) (-10254.598) * [-10242.080] (-10251.668) (-10262.327) (-10236.829) -- 0:37:24
Average standard deviation of split frequencies: 0.019816
91000 -- (-10235.866) (-10249.610) (-10257.095) [-10243.691] * (-10238.735) (-10248.101) (-10266.108) [-10232.986] -- 0:37:17
92000 -- (-10238.868) [-10247.925] (-10252.945) (-10250.574) * [-10238.519] (-10255.883) (-10264.927) (-10253.239) -- 0:37:20
93000 -- [-10239.232] (-10253.266) (-10248.459) (-10244.762) * (-10246.228) [-10238.066] (-10253.945) (-10258.415) -- 0:37:13
94000 -- (-10246.745) (-10246.290) (-10243.662) [-10239.932] * (-10244.285) [-10232.318] (-10240.527) (-10249.998) -- 0:37:06
95000 -- [-10249.163] (-10243.233) (-10262.570) (-10242.028) * (-10241.381) (-10256.057) (-10247.918) [-10243.697] -- 0:36:59
Average standard deviation of split frequencies: 0.022236
96000 -- [-10240.616] (-10245.540) (-10267.724) (-10251.566) * (-10231.833) (-10251.287) (-10247.434) [-10232.819] -- 0:36:52
97000 -- [-10247.760] (-10244.463) (-10248.143) (-10256.293) * [-10239.322] (-10244.669) (-10251.335) (-10244.857) -- 0:36:46
98000 -- [-10241.674] (-10246.870) (-10247.493) (-10243.914) * (-10249.649) (-10246.846) [-10240.064] (-10266.998) -- 0:36:39
99000 -- [-10250.005] (-10240.785) (-10245.184) (-10243.759) * (-10243.330) (-10251.211) (-10268.378) [-10252.546] -- 0:36:33
100000 -- (-10261.000) (-10247.406) (-10249.002) [-10232.780] * (-10251.638) [-10241.185] (-10269.251) (-10257.731) -- 0:36:27
Average standard deviation of split frequencies: 0.022964
101000 -- (-10250.009) (-10245.593) (-10243.024) [-10243.032] * [-10233.224] (-10238.909) (-10248.051) (-10259.079) -- 0:36:20
102000 -- (-10248.443) (-10244.506) (-10251.107) [-10244.070] * (-10247.111) [-10244.161] (-10255.535) (-10268.092) -- 0:36:14
103000 -- (-10234.916) (-10238.384) (-10239.880) [-10242.338] * (-10248.928) (-10246.802) [-10240.233] (-10265.481) -- 0:36:08
104000 -- (-10248.141) (-10246.179) (-10251.232) [-10239.107] * (-10237.374) [-10253.351] (-10227.315) (-10249.220) -- 0:36:11
105000 -- (-10241.799) (-10246.586) (-10248.851) [-10250.387] * (-10269.442) (-10247.181) (-10243.711) [-10247.927] -- 0:36:05
Average standard deviation of split frequencies: 0.020676
106000 -- [-10245.995] (-10250.982) (-10251.083) (-10244.968) * (-10246.646) [-10239.486] (-10254.019) (-10258.288) -- 0:35:59
107000 -- (-10242.432) [-10232.450] (-10248.667) (-10240.704) * [-10254.484] (-10258.581) (-10245.711) (-10246.541) -- 0:35:53
108000 -- (-10255.721) (-10231.681) [-10239.832] (-10246.326) * (-10272.265) [-10233.580] (-10250.541) (-10249.388) -- 0:35:47
109000 -- (-10249.735) [-10235.542] (-10241.420) (-10243.491) * (-10257.018) [-10230.534] (-10247.296) (-10237.476) -- 0:35:41
110000 -- [-10242.445] (-10239.701) (-10257.383) (-10248.442) * (-10259.724) (-10241.304) (-10238.179) [-10237.280] -- 0:35:36
Average standard deviation of split frequencies: 0.019011
111000 -- (-10246.518) (-10252.722) (-10248.292) [-10236.485] * (-10252.851) [-10241.762] (-10257.067) (-10242.599) -- 0:35:30
112000 -- (-10243.842) (-10238.698) [-10259.148] (-10246.010) * (-10238.373) (-10252.979) [-10235.660] (-10239.918) -- 0:35:24
113000 -- [-10236.433] (-10235.965) (-10250.818) (-10252.021) * [-10244.620] (-10242.580) (-10243.372) (-10240.676) -- 0:35:19
114000 -- [-10239.882] (-10255.780) (-10246.632) (-10264.393) * (-10255.033) (-10253.207) [-10237.127] (-10233.478) -- 0:35:13
115000 -- (-10245.804) (-10244.573) [-10233.636] (-10250.302) * (-10250.589) [-10240.403] (-10252.226) (-10258.779) -- 0:35:16
Average standard deviation of split frequencies: 0.018250
116000 -- (-10249.942) [-10245.322] (-10260.245) (-10252.880) * [-10236.979] (-10247.265) (-10248.113) (-10257.917) -- 0:35:10
117000 -- (-10257.380) [-10242.211] (-10245.250) (-10255.679) * (-10253.434) [-10238.999] (-10260.901) (-10248.264) -- 0:35:05
118000 -- (-10251.539) (-10245.946) (-10253.075) [-10249.720] * (-10259.747) [-10229.149] (-10246.475) (-10252.239) -- 0:35:00
119000 -- (-10246.100) (-10258.650) (-10249.687) [-10248.887] * (-10258.946) (-10231.086) [-10264.835] (-10261.909) -- 0:34:55
120000 -- (-10260.141) (-10250.794) (-10242.193) [-10238.141] * (-10255.977) [-10233.370] (-10247.380) (-10244.836) -- 0:34:50
Average standard deviation of split frequencies: 0.018376
121000 -- (-10257.740) (-10249.987) [-10239.495] (-10243.278) * (-10245.134) [-10244.967] (-10259.545) (-10246.438) -- 0:34:44
122000 -- [-10239.371] (-10250.661) (-10255.864) (-10252.652) * (-10252.782) (-10234.363) (-10242.631) [-10250.661] -- 0:34:39
123000 -- (-10263.217) [-10250.147] (-10253.261) (-10246.975) * (-10257.467) (-10242.857) [-10249.777] (-10247.912) -- 0:34:34
124000 -- [-10252.875] (-10240.228) (-10244.184) (-10247.503) * (-10250.951) (-10255.657) (-10267.020) [-10251.995] -- 0:34:29
125000 -- (-10236.793) [-10242.588] (-10249.697) (-10238.701) * [-10239.714] (-10248.465) (-10253.718) (-10239.027) -- 0:34:32
Average standard deviation of split frequencies: 0.017806
126000 -- (-10249.888) (-10243.431) (-10240.755) [-10240.379] * (-10251.949) (-10245.394) (-10246.296) [-10243.147] -- 0:34:27
127000 -- (-10256.184) (-10242.835) [-10250.105] (-10254.521) * (-10253.451) [-10240.631] (-10238.739) (-10247.740) -- 0:34:22
128000 -- (-10251.226) (-10254.106) [-10233.273] (-10240.950) * [-10242.473] (-10251.561) (-10240.215) (-10229.167) -- 0:34:17
129000 -- (-10245.140) (-10258.973) [-10230.877] (-10245.618) * [-10248.762] (-10242.196) (-10241.492) (-10249.880) -- 0:34:12
130000 -- (-10246.040) (-10255.429) [-10255.931] (-10250.678) * [-10244.653] (-10243.870) (-10245.407) (-10239.630) -- 0:34:07
Average standard deviation of split frequencies: 0.016949
131000 -- (-10253.144) (-10251.783) [-10246.105] (-10247.617) * [-10239.121] (-10243.628) (-10254.090) (-10257.223) -- 0:34:03
132000 -- [-10243.142] (-10247.134) (-10263.104) (-10248.627) * (-10255.538) (-10253.574) (-10249.725) [-10247.289] -- 0:33:58
133000 -- [-10246.567] (-10253.960) (-10240.249) (-10252.458) * (-10260.451) (-10253.712) (-10240.363) [-10235.677] -- 0:33:53
134000 -- (-10240.532) (-10253.569) [-10243.309] (-10259.483) * (-10264.435) (-10246.079) [-10249.016] (-10261.071) -- 0:33:55
135000 -- (-10257.444) (-10242.706) [-10252.494] (-10236.038) * (-10242.815) [-10240.062] (-10251.142) (-10252.487) -- 0:33:51
Average standard deviation of split frequencies: 0.015156
136000 -- (-10260.349) (-10250.752) [-10248.745] (-10242.578) * (-10254.949) [-10250.085] (-10248.452) (-10250.912) -- 0:33:46
137000 -- (-10258.075) [-10238.734] (-10245.360) (-10248.192) * (-10256.511) (-10255.192) (-10245.014) [-10239.487] -- 0:33:42
138000 -- [-10248.649] (-10243.453) (-10255.909) (-10249.109) * (-10243.661) [-10244.473] (-10256.797) (-10258.330) -- 0:33:37
139000 -- [-10231.338] (-10245.908) (-10254.664) (-10248.592) * (-10252.760) [-10260.459] (-10246.525) (-10253.556) -- 0:33:33
140000 -- (-10247.584) (-10236.488) (-10262.109) [-10254.417] * (-10247.469) (-10249.365) [-10230.869] (-10248.694) -- 0:33:28
Average standard deviation of split frequencies: 0.015573
141000 -- (-10260.184) (-10248.476) (-10255.285) [-10238.316] * (-10252.642) (-10249.329) (-10256.023) [-10235.830] -- 0:33:24
142000 -- [-10258.728] (-10238.128) (-10249.643) (-10230.135) * (-10245.758) [-10242.162] (-10265.610) (-10237.536) -- 0:33:26
143000 -- (-10249.310) [-10239.081] (-10248.699) (-10235.532) * (-10258.846) (-10243.449) (-10261.766) [-10243.863] -- 0:33:21
144000 -- (-10254.837) (-10237.529) (-10251.266) [-10245.805] * (-10246.602) [-10234.570] (-10248.734) (-10245.404) -- 0:33:17
145000 -- (-10252.236) (-10249.922) [-10246.559] (-10246.562) * (-10244.244) (-10243.715) (-10249.225) [-10252.069] -- 0:33:13
Average standard deviation of split frequencies: 0.015187
146000 -- (-10239.188) [-10241.956] (-10248.064) (-10262.660) * (-10243.649) [-10232.742] (-10257.923) (-10233.143) -- 0:33:08
147000 -- (-10255.920) [-10240.694] (-10269.417) (-10265.210) * (-10244.254) (-10237.834) (-10248.267) [-10235.732] -- 0:33:04
148000 -- (-10252.555) [-10237.051] (-10256.266) (-10255.861) * (-10248.666) [-10236.919] (-10253.108) (-10239.822) -- 0:33:00
149000 -- (-10265.320) (-10267.645) [-10256.900] (-10247.370) * [-10237.510] (-10244.692) (-10250.722) (-10254.553) -- 0:32:56
150000 -- (-10247.814) (-10247.879) (-10252.223) [-10232.148] * (-10255.597) (-10250.436) (-10271.497) [-10253.027] -- 0:32:52
Average standard deviation of split frequencies: 0.014563
151000 -- (-10248.398) (-10248.103) [-10243.681] (-10236.732) * (-10238.150) (-10247.398) [-10240.264] (-10265.269) -- 0:32:47
152000 -- (-10245.374) [-10240.733] (-10249.020) (-10254.295) * (-10255.219) (-10237.578) [-10231.602] (-10245.321) -- 0:32:43
153000 -- (-10249.218) (-10250.613) (-10244.023) [-10253.749] * (-10250.792) [-10239.708] (-10252.772) (-10261.710) -- 0:32:39
154000 -- (-10247.213) (-10246.785) (-10241.055) [-10238.046] * (-10243.775) [-10247.770] (-10238.414) (-10248.311) -- 0:32:35
155000 -- (-10256.311) [-10233.853] (-10254.468) (-10237.807) * (-10236.163) (-10255.895) [-10230.817] (-10263.760) -- 0:32:37
Average standard deviation of split frequencies: 0.015221
156000 -- (-10266.325) (-10246.408) (-10254.218) [-10236.315] * (-10252.789) [-10247.074] (-10237.030) (-10246.926) -- 0:32:33
157000 -- (-10242.258) (-10254.367) [-10243.678] (-10239.073) * (-10245.983) (-10241.740) [-10242.196] (-10265.575) -- 0:32:29
158000 -- (-10256.515) (-10241.680) (-10257.466) [-10247.852] * (-10256.416) [-10242.986] (-10239.906) (-10246.492) -- 0:32:25
159000 -- (-10246.013) [-10237.500] (-10263.164) (-10264.403) * (-10255.852) (-10237.261) [-10230.341] (-10256.952) -- 0:32:21
160000 -- (-10247.231) [-10245.268] (-10256.914) (-10253.822) * [-10235.746] (-10275.050) (-10244.695) (-10241.531) -- 0:32:17
Average standard deviation of split frequencies: 0.015335
161000 -- (-10237.154) (-10254.973) [-10245.007] (-10250.506) * (-10244.044) (-10247.528) [-10260.079] (-10256.597) -- 0:32:13
162000 -- [-10239.886] (-10253.260) (-10264.876) (-10248.189) * [-10231.763] (-10247.411) (-10243.653) (-10242.671) -- 0:32:09
163000 -- [-10246.723] (-10248.728) (-10250.578) (-10257.631) * (-10259.314) (-10238.498) (-10241.450) [-10245.489] -- 0:32:10
164000 -- [-10244.001] (-10249.048) (-10264.417) (-10248.372) * (-10260.100) (-10245.224) (-10249.800) [-10240.352] -- 0:32:06
165000 -- (-10240.461) (-10240.879) (-10259.947) [-10242.373] * (-10250.589) (-10241.232) [-10243.203] (-10247.231) -- 0:32:03
Average standard deviation of split frequencies: 0.015025
166000 -- (-10243.581) [-10243.892] (-10269.867) (-10247.082) * (-10236.049) [-10235.547] (-10237.862) (-10249.836) -- 0:31:59
167000 -- [-10237.910] (-10260.293) (-10257.187) (-10265.329) * (-10243.110) [-10238.390] (-10257.017) (-10247.003) -- 0:31:55
168000 -- [-10239.751] (-10243.530) (-10263.124) (-10245.141) * (-10232.420) (-10248.431) [-10247.512] (-10258.067) -- 0:31:51
169000 -- [-10243.230] (-10252.694) (-10257.986) (-10251.003) * [-10239.318] (-10243.042) (-10245.600) (-10242.919) -- 0:31:47
170000 -- (-10256.044) (-10247.806) (-10265.826) [-10240.687] * (-10241.669) [-10244.579] (-10240.717) (-10254.174) -- 0:31:44
Average standard deviation of split frequencies: 0.014015
171000 -- (-10243.454) [-10237.220] (-10267.487) (-10247.419) * (-10249.474) (-10235.942) (-10249.364) [-10241.523] -- 0:31:40
172000 -- (-10237.913) [-10245.106] (-10250.819) (-10243.632) * (-10257.124) [-10245.787] (-10253.553) (-10250.419) -- 0:31:41
173000 -- (-10251.891) (-10252.579) (-10245.103) [-10246.659] * (-10266.435) (-10244.741) [-10238.373] (-10258.190) -- 0:31:37
174000 -- [-10243.403] (-10265.488) (-10248.146) (-10256.668) * (-10261.312) (-10250.234) [-10246.635] (-10252.572) -- 0:31:34
175000 -- [-10233.254] (-10265.740) (-10247.396) (-10245.992) * [-10243.826] (-10241.998) (-10258.640) (-10245.527) -- 0:31:30
Average standard deviation of split frequencies: 0.012988
176000 -- [-10233.243] (-10245.039) (-10240.424) (-10263.148) * (-10246.201) (-10245.221) (-10245.102) [-10247.068] -- 0:31:26
177000 -- (-10229.090) (-10244.089) (-10247.917) [-10245.164] * (-10253.776) (-10254.069) (-10250.822) [-10229.465] -- 0:31:23
178000 -- [-10248.495] (-10239.234) (-10245.124) (-10244.712) * (-10244.919) (-10250.915) [-10251.494] (-10243.169) -- 0:31:19
179000 -- (-10258.768) (-10242.665) [-10243.191] (-10243.278) * (-10241.073) (-10260.023) (-10247.996) [-10229.735] -- 0:31:15
180000 -- [-10230.002] (-10250.846) (-10248.932) (-10239.856) * (-10254.982) (-10254.210) (-10244.873) [-10234.839] -- 0:31:12
Average standard deviation of split frequencies: 0.013588
181000 -- (-10247.460) (-10263.851) (-10239.330) [-10245.885] * (-10241.380) (-10249.171) (-10238.647) [-10235.912] -- 0:31:08
182000 -- [-10239.480] (-10245.085) (-10237.608) (-10255.374) * [-10239.193] (-10251.158) (-10250.551) (-10242.462) -- 0:31:09
183000 -- (-10245.368) (-10246.239) (-10254.102) [-10239.034] * [-10241.370] (-10249.087) (-10249.577) (-10237.261) -- 0:31:06
184000 -- (-10254.964) [-10238.159] (-10249.974) (-10246.629) * [-10247.617] (-10234.785) (-10246.649) (-10246.904) -- 0:31:02
185000 -- [-10242.446] (-10244.530) (-10247.723) (-10245.001) * [-10239.933] (-10243.221) (-10271.673) (-10260.716) -- 0:30:59
Average standard deviation of split frequencies: 0.013804
186000 -- (-10238.875) (-10246.432) (-10254.594) [-10244.511] * (-10247.263) [-10247.129] (-10270.125) (-10247.761) -- 0:30:55
187000 -- (-10251.038) [-10244.904] (-10235.537) (-10253.315) * (-10250.346) [-10241.593] (-10258.524) (-10231.257) -- 0:30:52
188000 -- (-10255.925) [-10236.463] (-10259.973) (-10256.343) * [-10241.755] (-10239.999) (-10256.528) (-10244.045) -- 0:30:48
189000 -- (-10243.125) (-10248.373) [-10237.084] (-10267.901) * (-10246.048) (-10243.053) (-10246.886) [-10239.585] -- 0:30:45
190000 -- [-10249.313] (-10251.441) (-10248.750) (-10256.891) * [-10244.602] (-10258.782) (-10244.068) (-10242.008) -- 0:30:41
Average standard deviation of split frequencies: 0.013576
191000 -- (-10247.517) [-10236.074] (-10249.074) (-10247.799) * (-10246.161) (-10245.298) (-10251.744) [-10234.425] -- 0:30:42
192000 -- (-10246.528) (-10241.534) (-10257.578) [-10237.612] * (-10252.913) [-10239.491] (-10245.733) (-10246.317) -- 0:30:39
193000 -- (-10259.837) [-10242.885] (-10258.602) (-10237.933) * [-10233.339] (-10241.513) (-10262.218) (-10242.600) -- 0:30:35
194000 -- [-10238.488] (-10244.309) (-10249.711) (-10251.879) * (-10247.682) [-10241.454] (-10252.063) (-10245.849) -- 0:30:32
195000 -- [-10239.362] (-10242.016) (-10241.593) (-10246.527) * [-10237.072] (-10251.608) (-10251.599) (-10244.023) -- 0:30:28
Average standard deviation of split frequencies: 0.012874
196000 -- [-10245.247] (-10242.803) (-10252.990) (-10254.718) * [-10241.189] (-10229.190) (-10259.664) (-10263.687) -- 0:30:25
197000 -- [-10238.593] (-10242.743) (-10250.059) (-10257.496) * (-10253.085) (-10245.186) (-10255.224) [-10248.043] -- 0:30:22
198000 -- (-10245.189) [-10244.265] (-10232.206) (-10253.563) * [-10252.177] (-10241.764) (-10246.402) (-10257.292) -- 0:30:18
199000 -- (-10263.424) (-10243.084) [-10239.307] (-10236.132) * [-10249.291] (-10241.933) (-10256.789) (-10238.007) -- 0:30:15
200000 -- (-10258.628) (-10246.330) (-10237.168) [-10232.567] * (-10263.996) (-10243.622) [-10241.999] (-10241.138) -- 0:30:16
Average standard deviation of split frequencies: 0.012765
201000 -- (-10253.163) [-10226.778] (-10242.750) (-10232.839) * (-10248.661) [-10232.555] (-10239.640) (-10253.657) -- 0:30:12
202000 -- (-10239.776) (-10245.804) [-10232.929] (-10245.184) * (-10263.393) (-10248.012) [-10238.440] (-10256.372) -- 0:30:09
203000 -- (-10254.941) [-10248.592] (-10245.435) (-10247.000) * (-10244.071) (-10251.281) (-10244.074) [-10245.231] -- 0:30:06
204000 -- (-10253.161) (-10255.544) [-10226.737] (-10257.068) * (-10238.137) (-10252.566) (-10245.603) [-10245.158] -- 0:30:02
205000 -- [-10237.861] (-10263.623) (-10245.929) (-10246.361) * (-10247.684) (-10249.233) (-10246.255) [-10237.697] -- 0:29:59
Average standard deviation of split frequencies: 0.013076
206000 -- (-10249.389) (-10247.980) [-10236.219] (-10260.607) * (-10239.346) [-10250.216] (-10245.197) (-10244.077) -- 0:29:56
207000 -- (-10242.298) [-10250.283] (-10262.318) (-10253.514) * (-10247.306) (-10256.095) (-10258.052) [-10244.685] -- 0:29:52
208000 -- (-10246.210) (-10248.160) [-10249.079] (-10239.202) * (-10243.393) [-10242.238] (-10248.930) (-10248.897) -- 0:29:53
209000 -- (-10253.052) (-10248.028) (-10257.787) [-10245.007] * (-10238.584) (-10257.211) [-10245.898] (-10242.522) -- 0:29:50
210000 -- (-10239.038) (-10255.783) [-10243.688] (-10261.893) * [-10239.603] (-10248.931) (-10252.339) (-10240.877) -- 0:29:46
Average standard deviation of split frequencies: 0.013595
211000 -- (-10239.525) (-10244.690) (-10254.910) [-10242.598] * (-10243.892) (-10238.822) (-10255.354) [-10243.968] -- 0:29:43
212000 -- [-10236.916] (-10245.424) (-10244.784) (-10239.636) * (-10237.049) (-10255.701) [-10244.061] (-10244.859) -- 0:29:40
213000 -- (-10247.312) (-10253.282) (-10242.971) [-10238.663] * (-10250.631) [-10235.316] (-10248.004) (-10248.534) -- 0:29:37
214000 -- (-10251.284) (-10250.062) (-10240.536) [-10242.785] * (-10252.926) (-10246.174) (-10250.644) [-10236.634] -- 0:29:34
215000 -- (-10247.920) (-10240.039) (-10262.460) [-10239.871] * (-10252.113) (-10248.496) (-10238.747) [-10233.517] -- 0:29:30
Average standard deviation of split frequencies: 0.013556
216000 -- (-10237.693) [-10242.520] (-10266.918) (-10252.498) * (-10240.949) [-10242.471] (-10257.782) (-10256.560) -- 0:29:27
217000 -- (-10247.215) [-10251.281] (-10259.620) (-10253.037) * [-10242.806] (-10239.884) (-10247.523) (-10260.720) -- 0:29:28
218000 -- (-10237.194) [-10246.608] (-10244.766) (-10242.352) * (-10244.725) [-10249.464] (-10261.489) (-10255.366) -- 0:29:24
219000 -- (-10247.341) (-10247.993) [-10233.609] (-10238.938) * (-10266.404) [-10245.038] (-10243.477) (-10246.125) -- 0:29:21
220000 -- (-10263.960) [-10240.158] (-10240.806) (-10258.824) * (-10246.145) (-10251.789) (-10239.947) [-10233.707] -- 0:29:18
Average standard deviation of split frequencies: 0.012231
221000 -- (-10248.741) [-10242.028] (-10256.774) (-10261.783) * (-10240.620) [-10237.492] (-10239.105) (-10240.405) -- 0:29:15
222000 -- (-10246.851) [-10249.987] (-10242.345) (-10243.951) * (-10248.237) [-10253.880] (-10246.988) (-10241.895) -- 0:29:12
223000 -- (-10258.186) [-10235.937] (-10236.623) (-10234.399) * [-10233.249] (-10255.732) (-10249.957) (-10245.111) -- 0:29:09
224000 -- (-10255.790) [-10239.869] (-10236.573) (-10255.715) * (-10251.413) (-10243.304) (-10241.687) [-10246.370] -- 0:29:05
225000 -- (-10249.345) [-10239.148] (-10237.475) (-10234.744) * (-10246.836) (-10248.655) [-10236.675] (-10252.569) -- 0:29:02
Average standard deviation of split frequencies: 0.011588
226000 -- (-10242.093) (-10253.731) (-10233.755) [-10244.221] * (-10254.260) [-10239.335] (-10242.653) (-10249.709) -- 0:28:59
227000 -- (-10241.787) (-10258.807) (-10249.640) [-10243.190] * (-10269.156) [-10249.303] (-10248.019) (-10261.632) -- 0:28:56
228000 -- [-10244.441] (-10247.258) (-10245.055) (-10257.535) * [-10239.459] (-10241.396) (-10247.139) (-10244.662) -- 0:28:53
229000 -- (-10239.328) (-10246.581) [-10241.074] (-10238.307) * [-10254.446] (-10232.053) (-10254.225) (-10253.044) -- 0:28:53
230000 -- [-10235.971] (-10253.075) (-10258.183) (-10241.418) * (-10248.852) [-10231.799] (-10260.989) (-10260.177) -- 0:28:50
Average standard deviation of split frequencies: 0.011732
231000 -- (-10238.801) (-10257.648) [-10259.634] (-10256.584) * (-10255.114) [-10229.519] (-10257.482) (-10240.056) -- 0:28:47
232000 -- [-10236.039] (-10262.200) (-10252.879) (-10246.399) * (-10254.211) (-10245.745) [-10251.565] (-10243.791) -- 0:28:47
233000 -- (-10242.881) [-10236.698] (-10265.946) (-10267.684) * (-10254.473) (-10245.770) (-10257.687) [-10240.238] -- 0:28:48
234000 -- [-10236.739] (-10237.348) (-10263.281) (-10248.264) * [-10242.087] (-10247.249) (-10246.106) (-10252.615) -- 0:28:48
235000 -- (-10244.909) (-10257.285) (-10259.764) [-10246.249] * [-10242.825] (-10244.360) (-10257.066) (-10261.784) -- 0:28:48
Average standard deviation of split frequencies: 0.010854
236000 -- (-10249.829) (-10245.777) (-10252.449) [-10236.378] * (-10251.195) (-10240.581) (-10248.493) [-10244.965] -- 0:28:51
237000 -- (-10250.401) [-10252.160] (-10250.281) (-10252.195) * (-10250.340) [-10232.935] (-10248.476) (-10255.931) -- 0:28:52
238000 -- [-10237.163] (-10255.583) (-10244.002) (-10244.222) * (-10254.571) (-10248.333) [-10242.284] (-10248.650) -- 0:28:52
239000 -- (-10254.711) (-10245.713) [-10246.511] (-10254.162) * [-10238.632] (-10249.596) (-10249.347) (-10255.630) -- 0:28:48
240000 -- (-10258.753) (-10255.710) [-10260.575] (-10243.441) * [-10243.288] (-10251.808) (-10241.507) (-10250.066) -- 0:28:45
Average standard deviation of split frequencies: 0.010812
241000 -- (-10246.209) (-10239.126) (-10262.411) [-10228.179] * (-10242.233) (-10254.322) (-10254.723) [-10248.998] -- 0:28:42
242000 -- (-10239.696) [-10242.194] (-10243.801) (-10247.867) * (-10238.393) (-10252.177) [-10240.610] (-10238.151) -- 0:28:39
243000 -- (-10251.938) (-10261.938) (-10246.158) [-10243.953] * (-10259.469) (-10256.862) [-10242.290] (-10246.441) -- 0:28:36
244000 -- (-10257.427) [-10236.324] (-10234.988) (-10259.654) * (-10257.101) (-10254.883) [-10237.459] (-10258.414) -- 0:28:33
245000 -- (-10243.515) (-10238.629) (-10239.546) [-10246.935] * (-10268.307) [-10240.176] (-10244.361) (-10248.400) -- 0:28:30
Average standard deviation of split frequencies: 0.010808
246000 -- (-10249.486) [-10237.528] (-10234.395) (-10252.443) * (-10249.374) (-10233.547) [-10255.162] (-10264.234) -- 0:28:27
247000 -- (-10251.506) [-10241.110] (-10241.647) (-10253.507) * (-10234.948) (-10248.387) (-10259.228) [-10241.176] -- 0:28:24
248000 -- (-10237.536) [-10237.458] (-10242.039) (-10254.626) * [-10238.271] (-10254.151) (-10260.785) (-10247.551) -- 0:28:21
249000 -- (-10258.856) (-10239.097) (-10267.133) [-10241.462] * (-10240.954) [-10252.510] (-10277.034) (-10246.785) -- 0:28:21
250000 -- (-10244.587) (-10234.417) [-10247.128] (-10239.573) * (-10250.065) [-10247.072] (-10259.791) (-10253.048) -- 0:28:18
Average standard deviation of split frequencies: 0.010382
251000 -- (-10236.763) (-10238.144) (-10248.130) [-10245.269] * (-10238.625) (-10244.786) (-10265.328) [-10239.357] -- 0:28:14
252000 -- (-10252.093) (-10244.549) [-10255.207] (-10234.889) * (-10245.180) (-10244.047) (-10273.733) [-10246.908] -- 0:28:11
253000 -- [-10231.772] (-10245.679) (-10253.027) (-10252.595) * (-10246.311) [-10249.249] (-10262.933) (-10245.172) -- 0:28:08
254000 -- (-10240.486) [-10244.713] (-10259.713) (-10256.627) * [-10231.352] (-10247.704) (-10259.944) (-10246.451) -- 0:28:05
255000 -- (-10240.130) [-10240.871] (-10234.455) (-10242.939) * [-10238.308] (-10256.779) (-10249.929) (-10252.646) -- 0:28:02
Average standard deviation of split frequencies: 0.009706
256000 -- (-10248.467) [-10239.300] (-10245.645) (-10253.416) * (-10251.600) (-10243.511) (-10253.356) [-10244.335] -- 0:27:59
257000 -- (-10247.800) [-10234.272] (-10245.320) (-10252.227) * [-10249.975] (-10248.534) (-10262.000) (-10248.200) -- 0:27:56
258000 -- (-10247.934) [-10242.593] (-10243.696) (-10240.633) * (-10241.115) (-10261.085) [-10250.233] (-10239.871) -- 0:27:53
259000 -- (-10239.278) (-10243.605) [-10240.283] (-10263.604) * (-10246.250) (-10255.856) [-10241.124] (-10241.277) -- 0:27:53
260000 -- (-10245.299) (-10239.657) [-10231.326] (-10250.330) * (-10261.774) (-10252.464) (-10246.562) [-10242.361] -- 0:27:50
Average standard deviation of split frequencies: 0.009381
261000 -- (-10255.909) (-10247.901) [-10238.923] (-10247.018) * (-10250.778) [-10243.256] (-10248.441) (-10246.012) -- 0:27:47
262000 -- (-10271.147) [-10241.891] (-10251.971) (-10249.338) * (-10268.546) (-10249.728) [-10238.367] (-10245.354) -- 0:27:44
263000 -- (-10234.620) (-10243.005) [-10241.265] (-10245.103) * (-10258.341) (-10248.576) (-10257.417) [-10238.737] -- 0:27:41
264000 -- (-10257.279) (-10245.892) (-10256.211) [-10242.921] * (-10253.720) (-10249.214) (-10245.386) [-10235.293] -- 0:27:38
265000 -- (-10248.447) (-10248.336) [-10238.384] (-10240.979) * [-10234.045] (-10265.183) (-10247.131) (-10245.590) -- 0:27:35
Average standard deviation of split frequencies: 0.009347
266000 -- (-10245.170) (-10239.308) [-10231.985] (-10259.159) * (-10272.818) [-10256.785] (-10245.910) (-10257.139) -- 0:27:32
267000 -- (-10248.622) (-10257.293) (-10247.564) [-10236.542] * [-10249.785] (-10239.264) (-10252.988) (-10244.780) -- 0:27:29
268000 -- (-10256.533) (-10247.061) (-10239.479) [-10238.068] * (-10238.213) (-10244.577) (-10252.310) [-10236.034] -- 0:27:26
269000 -- (-10242.803) (-10253.289) [-10233.771] (-10247.646) * (-10244.140) [-10239.278] (-10245.404) (-10266.488) -- 0:27:24
270000 -- [-10238.304] (-10251.351) (-10254.513) (-10257.288) * [-10246.962] (-10248.959) (-10251.322) (-10257.127) -- 0:27:21
Average standard deviation of split frequencies: 0.008848
271000 -- [-10230.493] (-10246.897) (-10241.123) (-10249.736) * [-10229.552] (-10254.625) (-10262.989) (-10247.898) -- 0:27:18
272000 -- [-10234.807] (-10244.670) (-10241.161) (-10252.522) * (-10245.109) (-10244.537) (-10255.809) [-10247.632] -- 0:27:15
273000 -- (-10248.298) (-10249.899) (-10252.412) [-10251.195] * (-10244.679) [-10244.813] (-10236.346) (-10251.929) -- 0:27:15
274000 -- [-10245.818] (-10242.309) (-10246.978) (-10243.882) * (-10251.205) (-10239.406) (-10250.365) [-10245.007] -- 0:27:12
275000 -- [-10239.345] (-10251.279) (-10255.561) (-10258.221) * (-10246.899) [-10242.181] (-10260.042) (-10255.201) -- 0:27:09
Average standard deviation of split frequencies: 0.008401
276000 -- [-10242.729] (-10245.814) (-10253.800) (-10267.009) * (-10254.220) [-10242.487] (-10252.965) (-10245.940) -- 0:27:06
277000 -- (-10257.931) [-10244.472] (-10248.023) (-10253.413) * (-10261.569) (-10249.787) (-10253.730) [-10240.220] -- 0:27:03
278000 -- (-10253.423) [-10243.056] (-10245.931) (-10252.754) * (-10250.311) (-10255.588) [-10247.052] (-10249.335) -- 0:27:00
279000 -- (-10259.630) (-10249.168) (-10264.397) [-10257.583] * (-10247.086) (-10248.959) (-10253.365) [-10261.363] -- 0:26:57
280000 -- (-10247.683) [-10251.004] (-10273.130) (-10249.209) * (-10240.300) (-10246.044) (-10258.978) [-10242.149] -- 0:26:54
Average standard deviation of split frequencies: 0.008398
281000 -- (-10257.770) (-10236.330) [-10234.165] (-10255.214) * (-10252.738) (-10249.008) (-10254.935) [-10231.912] -- 0:26:54
282000 -- (-10242.188) (-10247.655) [-10247.716] (-10269.048) * (-10269.399) (-10252.973) [-10239.987] (-10241.133) -- 0:26:51
283000 -- (-10250.180) [-10244.998] (-10251.682) (-10254.054) * (-10261.110) [-10238.388] (-10241.747) (-10253.169) -- 0:26:48
284000 -- [-10238.563] (-10236.617) (-10253.349) (-10257.738) * (-10252.006) (-10229.749) [-10248.343] (-10249.524) -- 0:26:45
285000 -- (-10256.036) (-10242.145) [-10234.249] (-10255.744) * (-10254.054) [-10238.573] (-10252.429) (-10248.173) -- 0:26:43
Average standard deviation of split frequencies: 0.008791
286000 -- (-10248.249) (-10244.951) [-10231.916] (-10247.005) * (-10242.924) [-10245.704] (-10251.349) (-10264.946) -- 0:26:40
287000 -- (-10247.321) (-10247.734) [-10237.793] (-10255.859) * [-10242.396] (-10261.181) (-10241.056) (-10269.119) -- 0:26:37
288000 -- [-10241.202] (-10242.833) (-10251.860) (-10251.340) * (-10252.701) (-10259.427) [-10239.470] (-10259.830) -- 0:26:34
289000 -- (-10250.843) (-10229.983) [-10238.357] (-10251.659) * (-10244.337) (-10243.856) (-10254.537) [-10248.885] -- 0:26:31
290000 -- [-10254.779] (-10236.332) (-10249.572) (-10244.179) * (-10259.342) [-10242.897] (-10235.555) (-10236.454) -- 0:26:28
Average standard deviation of split frequencies: 0.009666
291000 -- (-10243.309) (-10249.734) (-10243.631) [-10246.232] * (-10250.940) [-10246.889] (-10252.441) (-10248.854) -- 0:26:26
292000 -- (-10254.158) (-10249.142) [-10236.079] (-10254.337) * (-10231.773) (-10248.269) [-10248.865] (-10252.806) -- 0:26:23
293000 -- (-10257.851) [-10252.395] (-10258.835) (-10247.828) * (-10249.814) (-10250.733) (-10237.447) [-10251.785] -- 0:26:20
294000 -- (-10262.131) (-10245.756) (-10257.004) [-10240.032] * (-10235.370) [-10249.439] (-10236.172) (-10242.929) -- 0:26:20
295000 -- (-10263.501) (-10251.593) [-10241.347] (-10250.861) * (-10251.948) [-10239.230] (-10240.658) (-10258.779) -- 0:26:17
Average standard deviation of split frequencies: 0.009290
296000 -- (-10241.674) [-10246.293] (-10248.127) (-10261.568) * [-10239.573] (-10248.468) (-10233.843) (-10264.853) -- 0:26:14
297000 -- (-10259.441) (-10260.666) [-10229.823] (-10261.679) * [-10234.207] (-10244.049) (-10233.878) (-10252.501) -- 0:26:11
298000 -- (-10254.224) (-10242.596) (-10242.778) [-10244.595] * (-10243.202) [-10240.026] (-10243.727) (-10245.462) -- 0:26:11
299000 -- [-10249.094] (-10247.299) (-10254.020) (-10255.269) * [-10249.878] (-10238.960) (-10255.473) (-10240.854) -- 0:26:08
300000 -- (-10251.498) (-10246.607) (-10253.791) [-10249.871] * (-10256.985) (-10237.304) [-10254.310] (-10242.533) -- 0:26:07
Average standard deviation of split frequencies: 0.008950
301000 -- (-10250.062) (-10236.589) [-10231.806] (-10257.497) * (-10250.822) (-10241.584) (-10257.216) [-10236.247] -- 0:26:07
302000 -- (-10236.271) [-10242.900] (-10235.575) (-10249.236) * (-10258.909) (-10245.493) [-10242.169] (-10248.873) -- 0:26:09
303000 -- (-10246.471) (-10270.752) [-10232.225] (-10245.484) * (-10250.100) (-10246.993) (-10259.289) [-10251.130] -- 0:26:08
304000 -- [-10240.399] (-10256.804) (-10239.975) (-10247.747) * (-10256.108) [-10242.216] (-10270.939) (-10249.286) -- 0:26:08
305000 -- (-10240.511) (-10252.649) [-10245.418] (-10253.659) * (-10244.345) [-10242.981] (-10251.031) (-10264.331) -- 0:26:05
Average standard deviation of split frequencies: 0.008639
306000 -- (-10242.439) (-10268.364) [-10244.677] (-10237.452) * (-10242.010) (-10253.874) [-10250.199] (-10258.970) -- 0:26:02
307000 -- [-10240.784] (-10272.440) (-10245.431) (-10249.978) * [-10233.377] (-10240.331) (-10252.635) (-10248.557) -- 0:26:02
308000 -- (-10248.787) (-10259.809) (-10258.775) [-10241.062] * [-10236.941] (-10255.495) (-10258.474) (-10249.407) -- 0:25:59
309000 -- (-10243.669) [-10243.197] (-10242.817) (-10248.762) * [-10235.093] (-10251.123) (-10250.385) (-10241.366) -- 0:25:56
310000 -- [-10234.707] (-10255.049) (-10262.395) (-10272.232) * (-10248.619) (-10233.151) [-10248.102] (-10247.359) -- 0:25:53
Average standard deviation of split frequencies: 0.007830
311000 -- [-10240.686] (-10273.307) (-10247.591) (-10269.175) * (-10246.207) (-10244.254) (-10241.419) [-10242.368] -- 0:25:50
312000 -- (-10249.037) (-10279.738) (-10244.571) [-10241.549] * (-10252.270) [-10246.647] (-10253.770) (-10248.690) -- 0:25:47
313000 -- [-10245.803] (-10241.042) (-10254.140) (-10250.687) * (-10250.274) (-10237.385) [-10252.439] (-10245.669) -- 0:25:45
314000 -- (-10240.990) (-10246.816) [-10242.748] (-10250.112) * (-10265.285) (-10245.780) (-10251.746) [-10262.268] -- 0:25:42
315000 -- (-10246.215) (-10253.809) (-10251.499) [-10240.448] * (-10260.981) [-10241.830] (-10256.547) (-10267.986) -- 0:25:41
Average standard deviation of split frequencies: 0.007794
316000 -- (-10255.457) (-10249.033) [-10244.986] (-10248.092) * (-10257.181) [-10239.215] (-10258.316) (-10240.043) -- 0:25:38
317000 -- [-10240.249] (-10239.173) (-10235.648) (-10243.562) * [-10231.797] (-10245.626) (-10260.305) (-10237.604) -- 0:25:36
318000 -- [-10246.303] (-10240.501) (-10234.786) (-10251.833) * (-10236.616) [-10246.442] (-10246.164) (-10244.457) -- 0:25:33
319000 -- (-10246.309) (-10238.857) [-10240.671] (-10247.177) * (-10252.224) [-10247.332] (-10255.273) (-10246.471) -- 0:25:30
320000 -- (-10239.008) [-10235.983] (-10242.567) (-10245.668) * [-10244.298] (-10237.652) (-10250.908) (-10258.461) -- 0:25:27
Average standard deviation of split frequencies: 0.008250
321000 -- (-10250.596) [-10229.998] (-10258.264) (-10248.027) * [-10247.367] (-10246.970) (-10249.961) (-10249.473) -- 0:25:25
322000 -- (-10236.774) [-10226.902] (-10245.003) (-10264.997) * (-10242.437) [-10243.564] (-10243.545) (-10267.500) -- 0:25:22
323000 -- (-10248.960) (-10248.227) [-10241.771] (-10242.045) * [-10242.096] (-10268.243) (-10258.941) (-10258.479) -- 0:25:19
324000 -- (-10265.619) (-10268.103) (-10242.582) [-10240.683] * (-10243.580) (-10243.288) [-10257.125] (-10247.967) -- 0:25:16
325000 -- [-10251.743] (-10252.500) (-10252.685) (-10238.682) * (-10235.180) [-10253.459] (-10259.691) (-10237.094) -- 0:25:16
Average standard deviation of split frequencies: 0.008322
326000 -- [-10244.934] (-10256.339) (-10255.974) (-10230.588) * (-10257.034) (-10243.327) (-10260.199) [-10242.060] -- 0:25:13
327000 -- [-10250.052] (-10260.106) (-10243.420) (-10258.396) * [-10245.018] (-10247.524) (-10250.159) (-10244.389) -- 0:25:10
328000 -- (-10248.624) (-10258.696) [-10233.709] (-10266.213) * (-10256.680) (-10241.640) [-10253.344] (-10241.952) -- 0:25:07
329000 -- (-10264.587) (-10266.722) [-10240.548] (-10244.663) * (-10247.842) (-10248.544) (-10241.569) [-10245.649] -- 0:25:05
330000 -- (-10272.112) (-10243.126) [-10240.197] (-10244.091) * (-10242.905) [-10249.054] (-10261.152) (-10241.327) -- 0:25:02
Average standard deviation of split frequencies: 0.008162
331000 -- (-10244.254) (-10251.743) [-10233.385] (-10250.490) * [-10236.925] (-10240.725) (-10250.000) (-10246.057) -- 0:24:59
332000 -- (-10252.611) (-10247.578) [-10235.956] (-10252.529) * [-10242.112] (-10251.220) (-10242.904) (-10247.735) -- 0:24:56
333000 -- (-10249.191) (-10244.775) (-10248.713) [-10239.473] * (-10256.617) [-10245.397] (-10245.106) (-10245.871) -- 0:24:54
334000 -- [-10250.193] (-10247.831) (-10251.028) (-10234.782) * (-10253.126) [-10240.785] (-10241.102) (-10241.550) -- 0:24:51
335000 -- [-10248.715] (-10247.234) (-10243.722) (-10241.423) * [-10239.787] (-10237.868) (-10253.574) (-10261.660) -- 0:24:48
Average standard deviation of split frequencies: 0.008090
336000 -- (-10246.760) [-10242.464] (-10250.069) (-10242.653) * [-10244.010] (-10252.576) (-10256.324) (-10254.686) -- 0:24:48
337000 -- (-10245.831) (-10260.526) (-10258.988) [-10243.030] * (-10246.376) [-10247.087] (-10252.851) (-10247.410) -- 0:24:45
338000 -- (-10250.388) (-10266.767) (-10252.148) [-10237.489] * (-10259.492) [-10243.594] (-10242.430) (-10235.842) -- 0:24:42
339000 -- (-10243.589) (-10263.389) (-10237.272) [-10242.992] * (-10246.005) (-10251.899) [-10244.792] (-10241.880) -- 0:24:39
340000 -- [-10239.678] (-10246.487) (-10249.541) (-10251.603) * (-10269.911) (-10257.705) [-10235.904] (-10245.325) -- 0:24:37
Average standard deviation of split frequencies: 0.007791
341000 -- (-10242.394) (-10251.194) (-10243.308) [-10246.622] * (-10259.211) (-10254.266) [-10236.332] (-10238.287) -- 0:24:34
342000 -- (-10229.972) (-10258.507) [-10240.237] (-10250.769) * (-10242.001) (-10254.240) [-10241.648] (-10247.024) -- 0:24:31
343000 -- (-10241.644) (-10243.690) (-10258.038) [-10234.647] * (-10247.480) (-10249.185) (-10263.929) [-10237.818] -- 0:24:29
344000 -- (-10261.166) (-10252.241) (-10257.206) [-10246.029] * [-10244.687] (-10257.651) (-10245.648) (-10252.999) -- 0:24:28
345000 -- (-10246.440) (-10257.270) (-10252.933) [-10236.203] * (-10245.079) (-10252.927) (-10247.409) [-10247.659] -- 0:24:25
Average standard deviation of split frequencies: 0.008014
346000 -- (-10234.908) [-10242.722] (-10239.569) (-10255.946) * (-10256.046) (-10254.605) [-10251.689] (-10247.213) -- 0:24:22
347000 -- (-10253.351) (-10251.827) [-10238.364] (-10246.761) * (-10262.809) [-10235.253] (-10263.442) (-10252.410) -- 0:24:22
348000 -- (-10246.708) [-10242.233] (-10246.864) (-10263.404) * (-10253.310) (-10248.200) [-10253.284] (-10251.879) -- 0:24:21
349000 -- (-10249.227) [-10254.735] (-10260.407) (-10262.154) * (-10251.754) [-10254.822] (-10247.420) (-10239.095) -- 0:24:18
350000 -- [-10243.624] (-10262.178) (-10256.988) (-10240.747) * (-10238.356) (-10253.745) (-10251.543) [-10237.455] -- 0:24:15
Average standard deviation of split frequencies: 0.007954
351000 -- (-10259.479) (-10242.485) (-10254.411) [-10250.224] * (-10246.255) (-10252.324) [-10247.334] (-10243.254) -- 0:24:13
352000 -- [-10239.672] (-10250.410) (-10260.351) (-10234.189) * (-10237.803) [-10241.828] (-10244.867) (-10241.644) -- 0:24:10
353000 -- (-10250.556) (-10250.303) (-10245.972) [-10240.301] * (-10249.808) (-10231.734) (-10242.352) [-10242.436] -- 0:24:07
354000 -- (-10253.182) (-10243.876) (-10247.489) [-10237.170] * (-10244.250) (-10250.871) [-10231.475] (-10239.697) -- 0:24:07
355000 -- (-10261.673) (-10273.111) [-10247.366] (-10258.836) * (-10263.723) (-10240.169) [-10240.934] (-10251.228) -- 0:24:04
Average standard deviation of split frequencies: 0.008792
356000 -- [-10243.373] (-10254.300) (-10247.336) (-10249.049) * (-10262.898) [-10246.711] (-10253.011) (-10248.574) -- 0:24:01
357000 -- [-10234.413] (-10237.756) (-10282.308) (-10247.742) * (-10249.106) [-10236.002] (-10260.380) (-10244.442) -- 0:23:59
358000 -- [-10234.090] (-10239.376) (-10247.893) (-10256.660) * (-10255.485) [-10242.029] (-10249.805) (-10262.454) -- 0:23:56
359000 -- (-10250.741) [-10237.788] (-10249.810) (-10242.254) * [-10240.840] (-10254.746) (-10250.928) (-10255.495) -- 0:23:53
360000 -- (-10240.407) [-10235.805] (-10244.332) (-10270.146) * (-10248.522) [-10236.551] (-10236.902) (-10247.926) -- 0:23:51
Average standard deviation of split frequencies: 0.007762
361000 -- (-10239.203) (-10245.111) (-10231.056) [-10241.561] * (-10255.321) (-10253.734) [-10235.845] (-10244.789) -- 0:23:48
362000 -- (-10254.194) (-10256.489) (-10257.538) [-10246.610] * (-10249.842) (-10265.375) (-10238.972) [-10241.464] -- 0:23:45
363000 -- (-10244.388) [-10234.173] (-10249.310) (-10245.618) * [-10252.338] (-10238.087) (-10245.885) (-10244.761) -- 0:23:43
364000 -- (-10244.313) (-10256.097) (-10251.721) [-10243.690] * (-10254.430) (-10253.231) (-10252.796) [-10232.535] -- 0:23:42
365000 -- (-10239.617) (-10245.206) [-10233.213] (-10263.579) * (-10259.907) (-10261.897) [-10249.109] (-10233.831) -- 0:23:39
Average standard deviation of split frequencies: 0.008075
366000 -- [-10236.492] (-10248.034) (-10240.370) (-10276.436) * [-10242.186] (-10262.838) (-10242.688) (-10235.760) -- 0:23:36
367000 -- (-10253.667) (-10243.610) (-10240.718) [-10256.186] * (-10243.873) [-10234.970] (-10246.043) (-10240.698) -- 0:23:34
368000 -- (-10236.784) (-10251.929) (-10233.186) [-10252.334] * (-10247.372) (-10257.207) (-10251.875) [-10241.527] -- 0:23:31
369000 -- (-10250.330) (-10248.526) [-10227.698] (-10239.701) * [-10239.589] (-10249.593) (-10234.935) (-10255.107) -- 0:23:29
370000 -- [-10245.860] (-10238.241) (-10243.120) (-10249.458) * (-10246.953) (-10250.179) [-10250.287] (-10264.923) -- 0:23:26
Average standard deviation of split frequencies: 0.007880
371000 -- (-10250.826) (-10247.679) [-10243.727] (-10244.023) * [-10243.305] (-10248.517) (-10250.264) (-10240.698) -- 0:23:23
372000 -- [-10242.143] (-10260.811) (-10255.078) (-10250.840) * [-10240.619] (-10243.143) (-10250.553) (-10244.628) -- 0:23:21
373000 -- (-10242.311) (-10261.068) [-10226.972] (-10248.950) * (-10253.869) (-10243.898) (-10244.146) [-10241.343] -- 0:23:18
374000 -- [-10241.748] (-10240.315) (-10243.184) (-10244.371) * (-10243.918) (-10259.394) [-10236.953] (-10250.854) -- 0:23:17
375000 -- (-10249.826) [-10239.537] (-10244.055) (-10252.467) * [-10251.430] (-10249.299) (-10256.610) (-10250.975) -- 0:23:15
Average standard deviation of split frequencies: 0.007748
376000 -- (-10247.032) [-10241.057] (-10240.228) (-10259.874) * (-10250.423) (-10253.141) [-10251.433] (-10242.104) -- 0:23:12
377000 -- (-10245.953) [-10249.706] (-10254.402) (-10259.055) * (-10247.955) (-10243.929) [-10247.939] (-10246.378) -- 0:23:09
378000 -- (-10248.650) (-10261.495) [-10239.724] (-10240.909) * (-10245.014) (-10271.107) (-10248.319) [-10238.383] -- 0:23:07
379000 -- [-10239.834] (-10254.679) (-10241.615) (-10252.599) * (-10237.856) (-10251.019) [-10240.416] (-10260.376) -- 0:23:04
380000 -- (-10243.152) (-10257.907) [-10230.267] (-10248.453) * [-10237.275] (-10258.784) (-10240.368) (-10256.696) -- 0:23:01
Average standard deviation of split frequencies: 0.007483
381000 -- [-10242.844] (-10249.747) (-10232.789) (-10253.217) * (-10250.465) (-10256.458) [-10251.598] (-10251.753) -- 0:22:59
382000 -- (-10259.073) (-10254.987) [-10243.046] (-10243.798) * (-10250.079) (-10251.091) (-10245.948) [-10256.018] -- 0:22:58
383000 -- (-10261.034) [-10236.096] (-10232.115) (-10240.397) * (-10245.888) (-10263.381) [-10240.783] (-10262.453) -- 0:22:55
384000 -- (-10249.032) (-10256.995) [-10237.187] (-10254.384) * [-10236.876] (-10262.202) (-10228.159) (-10275.804) -- 0:22:53
385000 -- (-10244.401) (-10245.327) [-10244.229] (-10254.110) * (-10243.067) (-10275.724) (-10240.647) [-10241.308] -- 0:22:50
Average standard deviation of split frequencies: 0.007976
386000 -- [-10236.756] (-10241.294) (-10247.643) (-10269.145) * (-10253.368) (-10256.923) [-10247.493] (-10245.574) -- 0:22:47
387000 -- (-10233.564) (-10234.031) (-10247.780) [-10247.655] * (-10259.231) (-10245.976) [-10234.150] (-10250.905) -- 0:22:45
388000 -- (-10236.661) [-10227.082] (-10248.709) (-10266.321) * (-10240.178) (-10246.186) [-10248.948] (-10254.566) -- 0:22:42
389000 -- (-10236.310) (-10241.721) [-10246.973] (-10256.564) * (-10262.936) [-10244.364] (-10235.459) (-10251.099) -- 0:22:40
390000 -- (-10232.790) (-10229.310) (-10256.395) [-10250.628] * (-10247.682) [-10250.712] (-10237.305) (-10255.535) -- 0:22:37
Average standard deviation of split frequencies: 0.008683
391000 -- (-10239.060) [-10232.783] (-10263.134) (-10237.655) * (-10256.132) (-10259.980) [-10236.806] (-10241.584) -- 0:22:36
392000 -- (-10241.455) [-10233.744] (-10234.531) (-10234.183) * (-10249.971) (-10240.810) (-10239.348) [-10244.426] -- 0:22:34
393000 -- (-10251.909) (-10243.560) [-10237.173] (-10240.538) * (-10258.088) [-10230.932] (-10243.941) (-10237.827) -- 0:22:31
394000 -- (-10253.703) (-10259.327) [-10233.124] (-10251.508) * (-10253.556) (-10245.917) [-10240.771] (-10244.241) -- 0:22:28
395000 -- (-10251.874) (-10248.043) (-10245.592) [-10238.447] * (-10263.659) (-10234.808) (-10242.120) [-10249.914] -- 0:22:26
Average standard deviation of split frequencies: 0.008236
396000 -- (-10264.913) (-10233.452) [-10241.396] (-10238.574) * (-10251.687) [-10261.298] (-10240.483) (-10243.539) -- 0:22:23
397000 -- (-10246.551) (-10248.671) [-10239.060] (-10247.387) * (-10249.883) [-10238.866] (-10254.324) (-10239.987) -- 0:22:21
398000 -- (-10255.396) (-10258.906) [-10238.257] (-10261.699) * (-10239.584) [-10240.929] (-10245.677) (-10249.396) -- 0:22:18
399000 -- (-10240.787) [-10240.528] (-10251.635) (-10254.699) * [-10245.996] (-10244.432) (-10242.574) (-10254.265) -- 0:22:16
400000 -- [-10252.200] (-10251.212) (-10253.073) (-10252.526) * (-10245.767) [-10245.413] (-10247.858) (-10241.511) -- 0:22:13
Average standard deviation of split frequencies: 0.008261
401000 -- (-10255.515) (-10262.374) (-10252.167) [-10252.161] * [-10232.268] (-10243.771) (-10250.787) (-10274.626) -- 0:22:12
402000 -- [-10246.439] (-10257.002) (-10247.941) (-10245.126) * (-10258.061) (-10238.870) [-10246.470] (-10271.292) -- 0:22:09
403000 -- (-10251.114) (-10246.891) [-10247.094] (-10244.392) * (-10247.165) (-10257.266) [-10244.592] (-10269.845) -- 0:22:07
404000 -- (-10249.927) [-10237.418] (-10263.452) (-10252.888) * (-10257.444) [-10238.875] (-10237.102) (-10259.453) -- 0:22:04
405000 -- (-10242.344) [-10239.957] (-10259.219) (-10239.017) * (-10253.549) (-10236.533) (-10249.417) [-10249.393] -- 0:22:02
Average standard deviation of split frequencies: 0.008337
406000 -- (-10256.450) (-10236.761) (-10267.662) [-10237.992] * (-10259.529) [-10226.315] (-10242.889) (-10257.678) -- 0:21:59
407000 -- (-10235.577) [-10250.170] (-10256.672) (-10250.985) * (-10252.234) [-10242.638] (-10263.311) (-10241.119) -- 0:21:57
408000 -- (-10245.297) (-10246.588) (-10242.960) [-10244.313] * (-10251.455) (-10246.024) [-10234.743] (-10259.306) -- 0:21:54
409000 -- (-10253.865) [-10239.722] (-10252.649) (-10243.026) * (-10254.342) (-10266.872) (-10249.220) [-10252.098] -- 0:21:52
410000 -- (-10270.709) (-10244.669) (-10248.052) [-10239.409] * (-10258.604) (-10235.013) (-10244.365) [-10233.690] -- 0:21:49
Average standard deviation of split frequencies: 0.008104
411000 -- (-10254.275) (-10251.175) [-10232.355] (-10262.439) * (-10259.885) (-10240.799) (-10238.135) [-10238.453] -- 0:21:46
412000 -- (-10263.140) (-10253.164) [-10239.793] (-10246.791) * (-10231.371) (-10242.015) (-10254.651) [-10242.732] -- 0:21:44
413000 -- (-10240.526) (-10260.095) (-10240.955) [-10233.099] * (-10261.742) (-10255.124) [-10242.492] (-10257.692) -- 0:21:41
414000 -- [-10235.553] (-10248.739) (-10241.047) (-10252.602) * [-10242.250] (-10255.178) (-10243.018) (-10244.046) -- 0:21:40
415000 -- (-10230.191) (-10246.759) [-10239.162] (-10246.646) * (-10243.932) (-10262.355) (-10254.378) [-10243.548] -- 0:21:38
Average standard deviation of split frequencies: 0.007215
416000 -- [-10238.099] (-10251.837) (-10250.978) (-10243.186) * [-10239.920] (-10261.088) (-10249.196) (-10239.577) -- 0:21:35
417000 -- (-10242.997) (-10246.287) (-10254.403) [-10244.499] * (-10253.893) [-10255.822] (-10252.898) (-10249.189) -- 0:21:33
418000 -- (-10260.846) (-10236.650) (-10256.978) [-10243.824] * (-10245.777) (-10247.317) (-10244.921) [-10252.130] -- 0:21:30
419000 -- (-10251.482) (-10232.568) (-10250.874) [-10229.769] * [-10258.679] (-10250.947) (-10251.841) (-10243.911) -- 0:21:28
420000 -- (-10253.354) (-10240.321) [-10247.621] (-10239.374) * [-10241.966] (-10246.384) (-10241.386) (-10246.277) -- 0:21:25
Average standard deviation of split frequencies: 0.007979
421000 -- (-10251.508) [-10250.198] (-10251.623) (-10263.095) * (-10246.292) [-10236.380] (-10243.988) (-10255.629) -- 0:21:23
422000 -- (-10245.761) (-10257.847) [-10237.100] (-10254.676) * (-10248.434) (-10241.497) [-10238.560] (-10254.708) -- 0:21:20
423000 -- (-10235.562) (-10261.164) [-10229.436] (-10256.804) * (-10267.829) [-10230.828] (-10257.737) (-10253.690) -- 0:21:18
424000 -- (-10255.094) (-10246.328) [-10242.874] (-10250.857) * (-10262.549) (-10247.326) [-10241.764] (-10236.762) -- 0:21:15
425000 -- (-10243.737) [-10255.371] (-10243.915) (-10245.101) * [-10244.470] (-10247.700) (-10239.455) (-10260.601) -- 0:21:13
Average standard deviation of split frequencies: 0.007356
426000 -- (-10241.613) (-10253.306) (-10251.391) [-10232.160] * [-10241.305] (-10259.426) (-10248.648) (-10269.609) -- 0:21:11
427000 -- [-10240.014] (-10254.256) (-10257.313) (-10240.781) * (-10249.061) (-10263.256) [-10240.208] (-10259.850) -- 0:21:09
428000 -- [-10240.229] (-10251.067) (-10255.463) (-10252.819) * [-10233.962] (-10268.445) (-10238.519) (-10255.625) -- 0:21:06
429000 -- [-10232.236] (-10248.856) (-10263.634) (-10246.073) * (-10253.090) (-10256.619) [-10233.815] (-10241.628) -- 0:21:04
430000 -- (-10241.878) [-10234.214] (-10253.672) (-10246.996) * (-10249.079) (-10243.158) [-10237.762] (-10237.022) -- 0:21:01
Average standard deviation of split frequencies: 0.007332
431000 -- (-10253.604) [-10231.048] (-10229.993) (-10251.306) * (-10267.185) [-10245.403] (-10236.683) (-10254.240) -- 0:20:59
432000 -- (-10256.863) [-10240.951] (-10234.338) (-10270.417) * (-10262.899) (-10246.019) (-10237.902) [-10242.744] -- 0:20:56
433000 -- (-10231.083) [-10240.739] (-10251.763) (-10268.584) * (-10245.403) [-10241.098] (-10251.959) (-10263.604) -- 0:20:54
434000 -- (-10243.210) [-10243.143] (-10249.863) (-10264.542) * (-10262.295) [-10245.773] (-10263.803) (-10248.905) -- 0:20:51
435000 -- (-10241.480) [-10237.941] (-10253.617) (-10256.048) * (-10255.319) (-10238.887) [-10242.462] (-10257.308) -- 0:20:49
Average standard deviation of split frequencies: 0.006735
436000 -- (-10241.194) [-10239.824] (-10252.430) (-10262.089) * (-10239.108) (-10243.171) [-10245.180] (-10244.783) -- 0:20:48
437000 -- (-10247.925) (-10259.955) [-10252.540] (-10255.349) * (-10238.440) [-10232.916] (-10248.974) (-10250.495) -- 0:20:45
438000 -- [-10233.182] (-10243.999) (-10245.301) (-10267.859) * (-10244.046) [-10236.305] (-10242.768) (-10235.946) -- 0:20:43
439000 -- (-10246.108) [-10240.622] (-10244.043) (-10255.549) * (-10234.525) (-10244.645) (-10249.164) [-10247.010] -- 0:20:40
440000 -- [-10242.985] (-10251.418) (-10245.740) (-10256.995) * [-10238.609] (-10260.778) (-10245.105) (-10259.043) -- 0:20:38
Average standard deviation of split frequencies: 0.006797
441000 -- (-10245.004) (-10249.216) [-10246.525] (-10241.970) * (-10247.881) (-10256.090) (-10259.897) [-10242.331] -- 0:20:35
442000 -- [-10236.944] (-10256.237) (-10244.980) (-10247.371) * [-10249.087] (-10266.359) (-10254.270) (-10259.133) -- 0:20:33
443000 -- (-10241.510) [-10238.413] (-10249.105) (-10245.476) * (-10250.831) [-10242.797] (-10250.697) (-10251.612) -- 0:20:30
444000 -- (-10257.099) [-10250.047] (-10258.869) (-10248.081) * (-10251.473) [-10240.888] (-10252.609) (-10244.856) -- 0:20:28
445000 -- (-10237.426) (-10258.017) [-10241.079] (-10250.636) * (-10260.187) (-10247.554) [-10236.519] (-10242.650) -- 0:20:25
Average standard deviation of split frequencies: 0.007187
446000 -- [-10236.200] (-10244.400) (-10263.971) (-10266.099) * (-10241.342) [-10236.855] (-10244.525) (-10255.191) -- 0:20:24
447000 -- (-10241.641) [-10233.536] (-10236.538) (-10254.009) * [-10234.413] (-10262.121) (-10252.986) (-10253.481) -- 0:20:22
448000 -- [-10233.560] (-10245.522) (-10247.117) (-10245.497) * [-10233.308] (-10258.353) (-10236.696) (-10249.231) -- 0:20:19
449000 -- [-10241.436] (-10246.605) (-10245.678) (-10241.761) * (-10238.874) (-10255.834) [-10244.120] (-10241.250) -- 0:20:17
450000 -- (-10254.109) [-10245.894] (-10254.825) (-10244.419) * (-10256.603) [-10229.037] (-10244.451) (-10238.114) -- 0:20:14
Average standard deviation of split frequencies: 0.007218
451000 -- (-10251.291) (-10251.444) [-10246.916] (-10238.209) * [-10244.263] (-10229.271) (-10241.475) (-10237.758) -- 0:20:12
452000 -- (-10245.995) (-10260.040) (-10243.698) [-10228.322] * (-10245.153) (-10239.720) (-10238.531) [-10242.259] -- 0:20:09
453000 -- (-10259.636) (-10256.445) [-10238.554] (-10258.250) * (-10253.849) (-10256.102) [-10244.605] (-10240.502) -- 0:20:07
454000 -- (-10243.095) [-10246.192] (-10238.676) (-10238.232) * [-10237.405] (-10270.221) (-10246.998) (-10241.769) -- 0:20:05
455000 -- (-10256.999) [-10232.271] (-10248.737) (-10252.533) * [-10234.472] (-10263.350) (-10240.547) (-10254.296) -- 0:20:02
Average standard deviation of split frequencies: 0.007131
456000 -- (-10262.822) [-10237.927] (-10256.265) (-10243.268) * (-10270.435) (-10251.930) [-10241.440] (-10251.427) -- 0:20:00
457000 -- (-10256.669) [-10241.791] (-10253.388) (-10244.216) * [-10241.732] (-10235.291) (-10253.772) (-10243.991) -- 0:19:57
458000 -- (-10245.303) (-10261.090) [-10238.558] (-10261.361) * (-10242.928) (-10250.057) [-10243.823] (-10256.049) -- 0:19:55
459000 -- (-10237.408) [-10243.712] (-10248.737) (-10264.976) * (-10255.157) [-10238.873] (-10243.641) (-10245.123) -- 0:19:53
460000 -- [-10239.090] (-10246.539) (-10260.514) (-10259.063) * (-10243.562) [-10234.997] (-10250.869) (-10263.178) -- 0:19:51
Average standard deviation of split frequencies: 0.007035
461000 -- (-10240.148) (-10239.437) [-10249.540] (-10246.734) * (-10244.373) [-10241.351] (-10249.142) (-10257.156) -- 0:19:49
462000 -- (-10259.974) (-10260.652) [-10246.198] (-10239.128) * (-10246.766) (-10252.679) [-10242.771] (-10248.619) -- 0:19:46
463000 -- (-10262.590) (-10252.117) [-10238.295] (-10247.007) * (-10255.980) (-10273.816) [-10231.083] (-10234.157) -- 0:19:44
464000 -- (-10253.603) (-10252.500) [-10236.533] (-10263.679) * (-10246.945) (-10251.452) [-10249.188] (-10237.147) -- 0:19:41
465000 -- (-10257.656) (-10259.815) (-10248.942) [-10246.348] * (-10251.772) (-10256.707) (-10239.137) [-10251.057] -- 0:19:39
Average standard deviation of split frequencies: 0.006854
466000 -- (-10245.110) (-10261.276) (-10255.222) [-10233.164] * [-10243.067] (-10264.496) (-10244.900) (-10247.977) -- 0:19:38
467000 -- (-10244.836) (-10255.683) [-10230.241] (-10268.091) * (-10238.087) [-10239.747] (-10246.305) (-10252.247) -- 0:19:36
468000 -- (-10252.881) (-10256.737) [-10235.532] (-10247.286) * [-10248.288] (-10244.115) (-10260.656) (-10250.499) -- 0:19:35
469000 -- [-10253.458] (-10258.045) (-10257.134) (-10244.505) * (-10238.857) (-10240.027) [-10231.799] (-10242.155) -- 0:19:34
470000 -- (-10259.457) (-10250.712) (-10255.552) [-10236.133] * (-10238.115) (-10260.274) (-10234.904) [-10242.514] -- 0:19:32
Average standard deviation of split frequencies: 0.006868
471000 -- [-10246.672] (-10255.525) (-10255.453) (-10234.331) * (-10245.665) (-10239.531) [-10234.677] (-10257.173) -- 0:19:32
472000 -- (-10255.752) [-10252.071] (-10245.001) (-10237.716) * (-10255.177) (-10245.886) [-10244.313] (-10254.657) -- 0:19:31
473000 -- (-10239.695) [-10242.001] (-10255.590) (-10250.587) * (-10261.192) (-10234.678) (-10249.550) [-10250.247] -- 0:19:29
474000 -- [-10240.144] (-10246.048) (-10248.472) (-10246.616) * (-10251.078) (-10249.164) [-10238.687] (-10245.098) -- 0:19:28
475000 -- (-10259.344) (-10232.208) (-10259.474) [-10233.553] * [-10234.530] (-10238.839) (-10255.133) (-10249.796) -- 0:19:27
Average standard deviation of split frequencies: 0.007139
476000 -- [-10240.446] (-10262.992) (-10259.585) (-10258.075) * (-10259.380) [-10238.155] (-10249.693) (-10244.515) -- 0:19:24
477000 -- (-10254.641) (-10251.568) (-10246.522) [-10243.633] * (-10262.468) [-10239.393] (-10246.612) (-10266.661) -- 0:19:22
478000 -- (-10250.451) (-10235.863) (-10238.407) [-10230.544] * (-10253.157) [-10238.035] (-10255.644) (-10264.425) -- 0:19:19
479000 -- (-10245.967) [-10233.008] (-10232.498) (-10251.327) * (-10242.459) [-10233.107] (-10241.161) (-10253.094) -- 0:19:17
480000 -- (-10257.034) (-10245.899) [-10244.262] (-10245.449) * (-10254.298) (-10256.823) [-10244.085] (-10249.238) -- 0:19:15
Average standard deviation of split frequencies: 0.006825
481000 -- (-10258.717) (-10238.295) [-10239.077] (-10255.907) * [-10248.569] (-10237.307) (-10256.608) (-10249.490) -- 0:19:13
482000 -- (-10251.955) (-10244.553) [-10231.131] (-10252.287) * (-10247.697) [-10235.976] (-10258.253) (-10252.567) -- 0:19:10
483000 -- (-10249.299) (-10250.780) [-10232.443] (-10259.669) * [-10237.240] (-10244.914) (-10252.801) (-10252.283) -- 0:19:08
484000 -- [-10230.018] (-10240.547) (-10225.808) (-10261.031) * (-10252.124) (-10260.644) [-10244.692] (-10254.163) -- 0:19:06
485000 -- (-10238.194) (-10245.643) [-10224.935] (-10241.941) * (-10253.370) (-10253.678) (-10252.760) [-10244.576] -- 0:19:03
Average standard deviation of split frequencies: 0.006988
486000 -- (-10261.758) (-10250.802) [-10256.386] (-10246.369) * (-10250.707) (-10246.390) [-10253.067] (-10252.256) -- 0:19:01
487000 -- (-10245.312) (-10239.561) [-10236.639] (-10253.249) * (-10246.961) (-10254.717) (-10253.840) [-10244.003] -- 0:18:58
488000 -- (-10245.305) (-10259.504) [-10239.411] (-10249.522) * (-10261.796) (-10252.618) (-10262.538) [-10229.922] -- 0:18:56
489000 -- (-10256.732) (-10245.763) [-10244.508] (-10247.025) * (-10257.059) [-10238.319] (-10247.825) (-10241.392) -- 0:18:53
490000 -- [-10253.215] (-10244.143) (-10250.832) (-10249.506) * (-10243.156) (-10255.750) [-10229.406] (-10245.930) -- 0:18:52
Average standard deviation of split frequencies: 0.006785
491000 -- [-10250.415] (-10240.455) (-10246.684) (-10240.211) * [-10242.133] (-10267.328) (-10234.894) (-10249.911) -- 0:18:49
492000 -- (-10260.803) (-10252.164) [-10248.947] (-10247.244) * (-10239.262) [-10243.451] (-10244.990) (-10257.298) -- 0:18:47
493000 -- (-10251.078) (-10248.819) [-10234.849] (-10239.829) * (-10245.891) (-10241.955) (-10258.454) [-10241.401] -- 0:18:45
494000 -- (-10245.395) (-10244.411) [-10238.575] (-10238.472) * [-10240.129] (-10236.257) (-10250.933) (-10252.437) -- 0:18:42
495000 -- (-10251.885) [-10242.004] (-10261.554) (-10236.395) * (-10249.360) (-10257.313) [-10255.384] (-10252.436) -- 0:18:40
Average standard deviation of split frequencies: 0.006475
496000 -- [-10235.939] (-10250.172) (-10249.950) (-10249.715) * (-10249.738) (-10267.064) [-10253.317] (-10246.692) -- 0:18:37
497000 -- (-10240.659) [-10231.106] (-10250.661) (-10253.039) * (-10256.508) (-10241.124) (-10246.822) [-10238.996] -- 0:18:35
498000 -- (-10243.709) [-10229.919] (-10252.848) (-10269.454) * [-10237.649] (-10251.793) (-10257.336) (-10236.528) -- 0:18:32
499000 -- (-10244.846) [-10237.405] (-10238.521) (-10249.961) * [-10236.675] (-10248.414) (-10256.224) (-10243.768) -- 0:18:30
500000 -- [-10242.237] (-10255.356) (-10251.590) (-10253.237) * (-10236.007) (-10244.457) (-10247.457) [-10239.048] -- 0:18:28
Average standard deviation of split frequencies: 0.006571
501000 -- [-10238.752] (-10244.727) (-10248.988) (-10252.835) * (-10260.275) (-10245.127) (-10250.809) [-10229.915] -- 0:18:26
502000 -- (-10257.255) (-10260.748) [-10237.461] (-10234.678) * (-10255.757) (-10229.591) (-10259.970) [-10256.827] -- 0:18:24
503000 -- (-10251.680) [-10243.673] (-10249.569) (-10235.552) * (-10239.734) [-10246.427] (-10253.114) (-10254.198) -- 0:18:21
504000 -- (-10245.492) (-10245.027) (-10233.789) [-10245.132] * (-10249.752) (-10239.230) [-10248.568] (-10241.617) -- 0:18:19
505000 -- (-10241.120) [-10249.153] (-10250.201) (-10258.734) * (-10262.664) (-10234.745) [-10233.869] (-10245.828) -- 0:18:16
Average standard deviation of split frequencies: 0.006386
506000 -- [-10243.192] (-10245.398) (-10238.227) (-10249.466) * (-10240.761) [-10228.370] (-10258.646) (-10238.137) -- 0:18:14
507000 -- (-10240.040) [-10248.243] (-10253.552) (-10246.621) * (-10258.276) (-10229.262) (-10261.753) [-10233.340] -- 0:18:11
508000 -- (-10255.298) [-10241.067] (-10244.095) (-10240.812) * (-10237.446) [-10239.074] (-10258.788) (-10246.652) -- 0:18:09
509000 -- (-10243.171) (-10255.571) [-10226.721] (-10253.181) * [-10234.966] (-10252.377) (-10253.784) (-10243.770) -- 0:18:07
510000 -- (-10263.013) (-10256.040) [-10234.681] (-10260.402) * [-10243.286] (-10247.615) (-10242.258) (-10265.527) -- 0:18:04
Average standard deviation of split frequencies: 0.006221
511000 -- (-10257.399) (-10266.505) [-10230.032] (-10255.785) * (-10242.722) (-10237.528) [-10237.046] (-10253.223) -- 0:18:03
512000 -- (-10248.272) (-10250.572) [-10234.223] (-10245.476) * (-10234.877) (-10239.378) (-10243.549) [-10238.829] -- 0:18:00
513000 -- (-10242.702) (-10245.669) (-10239.679) [-10243.452] * [-10228.768] (-10254.476) (-10266.905) (-10229.545) -- 0:17:58
514000 -- [-10250.263] (-10256.580) (-10268.264) (-10248.317) * [-10234.971] (-10245.416) (-10240.263) (-10243.803) -- 0:17:56
515000 -- (-10251.306) (-10249.091) (-10249.906) [-10243.847] * (-10233.777) (-10246.368) (-10242.895) [-10245.278] -- 0:17:53
Average standard deviation of split frequencies: 0.006492
516000 -- (-10241.716) (-10263.408) [-10252.671] (-10245.884) * (-10238.712) (-10242.433) (-10253.309) [-10242.600] -- 0:17:51
517000 -- (-10251.276) [-10255.853] (-10247.906) (-10243.154) * (-10255.646) [-10236.931] (-10251.704) (-10256.609) -- 0:17:48
518000 -- [-10247.550] (-10261.669) (-10230.572) (-10245.681) * (-10250.015) (-10253.725) (-10254.423) [-10237.134] -- 0:17:46
519000 -- (-10244.523) (-10243.141) [-10230.492] (-10248.358) * (-10251.723) (-10238.297) [-10240.214] (-10243.210) -- 0:17:43
520000 -- (-10255.799) [-10236.453] (-10248.950) (-10248.158) * (-10259.120) (-10258.162) [-10245.717] (-10242.153) -- 0:17:42
Average standard deviation of split frequencies: 0.006398
521000 -- (-10240.050) [-10239.028] (-10259.663) (-10248.011) * (-10245.622) (-10251.512) [-10248.654] (-10241.867) -- 0:17:40
522000 -- (-10249.516) [-10238.792] (-10242.090) (-10251.777) * [-10234.840] (-10264.653) (-10225.067) (-10247.930) -- 0:17:37
523000 -- [-10236.481] (-10257.698) (-10237.978) (-10244.636) * (-10251.190) (-10268.469) (-10237.129) [-10250.748] -- 0:17:35
524000 -- (-10249.953) [-10235.728] (-10241.006) (-10245.433) * [-10244.876] (-10250.950) (-10257.359) (-10261.759) -- 0:17:32
525000 -- (-10236.522) (-10247.861) [-10242.656] (-10264.843) * [-10244.836] (-10260.552) (-10261.838) (-10239.659) -- 0:17:30
Average standard deviation of split frequencies: 0.006293
526000 -- [-10233.905] (-10259.934) (-10251.281) (-10242.522) * (-10252.624) (-10255.092) (-10249.097) [-10256.836] -- 0:17:28
527000 -- (-10242.223) (-10263.264) (-10250.243) [-10248.097] * [-10245.914] (-10255.103) (-10257.329) (-10242.229) -- 0:17:25
528000 -- (-10266.792) [-10239.223] (-10240.303) (-10248.579) * [-10245.315] (-10257.669) (-10246.974) (-10240.861) -- 0:17:24
529000 -- (-10261.489) (-10249.158) [-10243.971] (-10262.397) * (-10258.799) (-10257.875) [-10241.675] (-10235.814) -- 0:17:21
530000 -- [-10250.176] (-10239.386) (-10259.628) (-10253.135) * (-10247.220) (-10258.661) [-10252.024] (-10241.430) -- 0:17:19
Average standard deviation of split frequencies: 0.006547
531000 -- (-10269.670) [-10242.122] (-10240.571) (-10238.494) * (-10247.941) (-10254.366) (-10233.419) [-10249.104] -- 0:17:16
532000 -- (-10240.439) (-10237.039) (-10245.532) [-10236.674] * (-10249.005) [-10236.897] (-10232.775) (-10261.397) -- 0:17:14
533000 -- [-10248.821] (-10245.741) (-10250.941) (-10246.054) * [-10238.025] (-10251.484) (-10248.935) (-10248.911) -- 0:17:12
534000 -- [-10246.025] (-10258.568) (-10253.255) (-10241.823) * (-10262.517) (-10246.378) [-10236.788] (-10254.370) -- 0:17:09
535000 -- (-10246.089) (-10255.410) [-10242.508] (-10248.057) * (-10259.759) (-10247.885) (-10238.879) [-10250.269] -- 0:17:07
Average standard deviation of split frequencies: 0.006558
536000 -- (-10252.486) (-10254.080) [-10233.969] (-10257.077) * [-10243.440] (-10240.724) (-10261.235) (-10258.521) -- 0:17:04
537000 -- (-10241.351) (-10245.968) (-10256.095) [-10240.473] * (-10238.391) (-10244.791) [-10246.986] (-10248.643) -- 0:17:03
538000 -- (-10247.004) (-10252.402) (-10254.759) [-10243.971] * (-10237.290) [-10235.375] (-10250.335) (-10251.293) -- 0:17:01
539000 -- [-10245.375] (-10246.018) (-10237.174) (-10248.566) * [-10231.692] (-10237.607) (-10249.885) (-10252.133) -- 0:16:58
540000 -- (-10250.341) (-10237.755) (-10245.437) [-10234.853] * [-10234.323] (-10257.609) (-10240.453) (-10245.167) -- 0:16:56
Average standard deviation of split frequencies: 0.005929
541000 -- (-10246.490) [-10241.455] (-10236.145) (-10242.114) * [-10252.051] (-10248.601) (-10247.977) (-10251.460) -- 0:16:53
542000 -- (-10236.970) [-10237.613] (-10239.404) (-10237.877) * [-10230.273] (-10241.360) (-10252.337) (-10245.835) -- 0:16:51
543000 -- (-10250.219) (-10258.052) (-10243.111) [-10240.624] * (-10243.125) [-10251.756] (-10256.548) (-10251.741) -- 0:16:49
544000 -- (-10246.893) [-10245.448] (-10251.346) (-10258.291) * [-10243.784] (-10245.236) (-10246.741) (-10249.367) -- 0:16:46
545000 -- (-10233.816) (-10252.428) [-10234.111] (-10251.256) * (-10242.299) (-10235.479) [-10242.926] (-10280.172) -- 0:16:44
Average standard deviation of split frequencies: 0.006343
546000 -- (-10243.971) (-10241.552) (-10249.083) [-10238.957] * [-10232.075] (-10248.087) (-10252.664) (-10254.964) -- 0:16:41
547000 -- (-10241.685) (-10261.522) [-10233.351] (-10240.770) * (-10240.226) [-10240.306] (-10258.965) (-10247.726) -- 0:16:39
548000 -- (-10243.298) (-10259.902) [-10243.417] (-10248.896) * [-10243.444] (-10255.809) (-10247.443) (-10245.347) -- 0:16:37
549000 -- (-10247.213) (-10261.513) (-10247.859) [-10240.968] * (-10244.198) (-10252.507) (-10265.869) [-10244.987] -- 0:16:34
550000 -- (-10248.357) (-10244.717) (-10249.695) [-10247.970] * (-10253.647) [-10243.017] (-10263.594) (-10248.442) -- 0:16:32
Average standard deviation of split frequencies: 0.006138
551000 -- [-10236.192] (-10257.628) (-10249.495) (-10244.178) * (-10241.816) [-10247.733] (-10244.499) (-10259.710) -- 0:16:30
552000 -- (-10232.507) (-10253.819) (-10240.983) [-10250.939] * (-10238.080) (-10251.673) (-10250.131) [-10249.788] -- 0:16:27
553000 -- [-10245.418] (-10238.106) (-10235.151) (-10232.494) * (-10244.649) [-10244.801] (-10260.611) (-10258.273) -- 0:16:26
554000 -- (-10244.411) (-10249.980) (-10244.107) [-10244.205] * (-10243.816) (-10248.737) [-10241.390] (-10256.969) -- 0:16:23
555000 -- [-10237.229] (-10252.186) (-10229.156) (-10266.288) * (-10250.311) (-10247.188) [-10242.293] (-10266.308) -- 0:16:21
Average standard deviation of split frequencies: 0.006332
556000 -- [-10228.983] (-10251.257) (-10235.503) (-10255.813) * (-10249.542) (-10239.059) (-10244.732) [-10252.752] -- 0:16:19
557000 -- [-10237.315] (-10262.975) (-10243.471) (-10273.308) * (-10244.514) (-10240.395) (-10244.159) [-10238.020] -- 0:16:16
558000 -- (-10245.094) [-10244.354] (-10246.451) (-10251.232) * (-10265.278) (-10256.364) (-10247.635) [-10240.171] -- 0:16:14
559000 -- (-10235.171) (-10269.525) (-10241.712) [-10247.807] * [-10242.641] (-10251.120) (-10243.305) (-10255.264) -- 0:16:11
560000 -- (-10238.258) (-10259.188) [-10238.494] (-10244.870) * (-10248.986) (-10254.089) (-10241.640) [-10231.349] -- 0:16:09
Average standard deviation of split frequencies: 0.006361
561000 -- (-10246.938) (-10244.499) [-10244.270] (-10235.248) * (-10240.471) (-10240.530) (-10243.661) [-10235.617] -- 0:16:07
562000 -- (-10240.643) (-10264.457) (-10252.389) [-10227.140] * (-10250.005) (-10237.888) (-10237.147) [-10230.830] -- 0:16:05
563000 -- (-10234.390) (-10245.146) (-10258.658) [-10229.308] * (-10251.070) [-10236.258] (-10256.198) (-10248.390) -- 0:16:03
564000 -- [-10236.322] (-10247.157) (-10252.350) (-10239.233) * (-10242.449) [-10243.591] (-10245.475) (-10250.692) -- 0:16:00
565000 -- [-10237.963] (-10239.811) (-10258.082) (-10242.726) * (-10255.728) (-10253.996) (-10248.074) [-10234.002] -- 0:15:58
Average standard deviation of split frequencies: 0.006500
566000 -- [-10234.779] (-10240.954) (-10255.078) (-10245.606) * (-10248.587) [-10246.228] (-10267.251) (-10235.077) -- 0:15:56
567000 -- [-10228.940] (-10251.376) (-10256.535) (-10245.964) * [-10233.674] (-10266.086) (-10245.295) (-10257.511) -- 0:15:53
568000 -- [-10230.689] (-10259.725) (-10249.754) (-10258.990) * (-10240.141) (-10242.741) (-10250.394) [-10242.746] -- 0:15:51
569000 -- [-10248.567] (-10235.071) (-10259.087) (-10244.981) * (-10261.728) [-10235.462] (-10240.105) (-10247.644) -- 0:15:49
570000 -- (-10239.785) [-10230.139] (-10256.746) (-10254.372) * [-10252.300] (-10257.894) (-10254.402) (-10243.115) -- 0:15:46
Average standard deviation of split frequencies: 0.006468
571000 -- (-10244.313) (-10246.091) (-10261.018) [-10251.981] * (-10248.051) (-10247.714) (-10251.051) [-10249.316] -- 0:15:45
572000 -- [-10243.623] (-10252.067) (-10245.743) (-10237.534) * (-10226.694) (-10243.588) [-10236.734] (-10258.476) -- 0:15:42
573000 -- [-10243.060] (-10223.868) (-10248.047) (-10255.633) * [-10239.597] (-10246.901) (-10248.184) (-10250.436) -- 0:15:40
574000 -- (-10262.398) (-10245.776) (-10250.991) [-10234.560] * [-10235.099] (-10255.416) (-10251.672) (-10245.372) -- 0:15:38
575000 -- (-10249.725) (-10235.413) [-10241.927] (-10244.530) * [-10235.303] (-10246.427) (-10233.305) (-10251.174) -- 0:15:35
Average standard deviation of split frequencies: 0.006814
576000 -- (-10241.842) [-10229.719] (-10232.941) (-10250.208) * (-10243.909) [-10239.418] (-10247.036) (-10250.051) -- 0:15:33
577000 -- (-10239.386) [-10240.630] (-10239.616) (-10248.005) * (-10244.519) (-10250.672) [-10235.096] (-10257.090) -- 0:15:31
578000 -- (-10232.795) [-10239.678] (-10252.493) (-10247.963) * (-10234.676) [-10238.467] (-10240.578) (-10243.374) -- 0:15:28
579000 -- [-10235.086] (-10239.682) (-10257.464) (-10260.003) * (-10243.372) [-10237.553] (-10237.933) (-10267.586) -- 0:15:26
580000 -- (-10249.732) [-10237.406] (-10254.183) (-10236.257) * (-10241.384) (-10256.606) [-10241.736] (-10249.807) -- 0:15:24
Average standard deviation of split frequencies: 0.007024
581000 -- (-10259.564) (-10235.924) (-10245.497) [-10240.405] * [-10245.844] (-10241.590) (-10253.770) (-10248.972) -- 0:15:22
582000 -- (-10246.690) (-10247.043) (-10250.143) [-10243.824] * (-10251.403) (-10238.595) (-10242.783) [-10248.793] -- 0:15:20
583000 -- (-10244.072) (-10256.129) (-10254.627) [-10241.757] * [-10245.331] (-10233.534) (-10244.175) (-10256.270) -- 0:15:17
584000 -- (-10248.803) [-10249.565] (-10265.453) (-10259.622) * (-10251.036) (-10250.753) [-10238.505] (-10236.511) -- 0:15:15
585000 -- (-10246.940) [-10240.236] (-10263.920) (-10241.247) * (-10256.919) [-10239.407] (-10242.502) (-10247.158) -- 0:15:13
Average standard deviation of split frequencies: 0.007308
586000 -- [-10239.337] (-10252.352) (-10244.819) (-10241.688) * (-10270.322) (-10244.569) (-10240.289) [-10248.661] -- 0:15:10
587000 -- (-10240.281) (-10245.883) (-10237.441) [-10235.849] * (-10242.754) (-10256.292) [-10236.044] (-10243.215) -- 0:15:08
588000 -- (-10249.299) (-10245.522) [-10234.670] (-10252.086) * (-10250.949) (-10252.865) (-10233.340) [-10244.952] -- 0:15:05
589000 -- (-10242.440) (-10245.836) (-10246.057) [-10229.868] * (-10250.075) (-10248.047) [-10250.377] (-10266.007) -- 0:15:03
590000 -- [-10249.977] (-10246.611) (-10248.658) (-10253.195) * [-10249.967] (-10245.059) (-10246.750) (-10252.261) -- 0:15:01
Average standard deviation of split frequencies: 0.007505
591000 -- (-10261.781) (-10261.976) (-10254.885) [-10242.509] * (-10245.939) (-10237.712) (-10273.732) [-10240.871] -- 0:14:58
592000 -- [-10243.542] (-10241.252) (-10237.505) (-10266.687) * (-10232.311) (-10250.365) (-10242.931) [-10238.626] -- 0:14:56
593000 -- (-10253.027) (-10258.217) [-10239.762] (-10257.835) * (-10253.094) [-10246.325] (-10268.551) (-10266.411) -- 0:14:54
594000 -- (-10245.058) (-10250.793) [-10244.705] (-10247.151) * (-10240.793) (-10254.969) (-10260.156) [-10236.883] -- 0:14:52
595000 -- [-10243.725] (-10250.699) (-10253.477) (-10243.826) * (-10239.080) [-10240.483] (-10262.061) (-10250.452) -- 0:14:50
Average standard deviation of split frequencies: 0.007015
596000 -- [-10249.290] (-10252.501) (-10243.552) (-10235.788) * (-10246.794) [-10237.034] (-10260.601) (-10260.426) -- 0:14:47
597000 -- [-10250.880] (-10258.168) (-10241.614) (-10241.570) * (-10237.359) [-10236.039] (-10248.571) (-10259.326) -- 0:14:45
598000 -- (-10247.627) (-10252.791) [-10232.143] (-10243.671) * (-10239.814) (-10269.996) [-10240.182] (-10244.380) -- 0:14:43
599000 -- [-10240.974] (-10262.720) (-10246.385) (-10246.224) * (-10268.104) (-10259.833) [-10243.193] (-10253.136) -- 0:14:40
600000 -- (-10240.675) (-10252.356) (-10260.228) [-10235.442] * (-10239.134) [-10238.512] (-10252.633) (-10251.065) -- 0:14:38
Average standard deviation of split frequencies: 0.007129
601000 -- (-10252.047) (-10253.068) (-10241.089) [-10241.374] * (-10258.680) [-10239.697] (-10264.643) (-10266.232) -- 0:14:37
602000 -- [-10236.705] (-10242.931) (-10246.571) (-10252.806) * (-10252.051) [-10239.360] (-10253.518) (-10246.110) -- 0:14:35
603000 -- (-10240.629) (-10240.420) (-10242.646) [-10236.666] * (-10241.035) [-10240.643] (-10253.409) (-10258.862) -- 0:14:34
604000 -- (-10247.840) (-10248.622) (-10247.468) [-10238.443] * (-10247.993) [-10247.003] (-10244.041) (-10255.138) -- 0:14:32
605000 -- [-10243.924] (-10258.581) (-10256.466) (-10239.670) * (-10246.726) (-10236.700) [-10239.896] (-10251.086) -- 0:14:30
Average standard deviation of split frequencies: 0.006869
606000 -- [-10239.886] (-10249.467) (-10261.281) (-10232.601) * (-10242.280) (-10251.108) (-10237.264) [-10228.732] -- 0:14:29
607000 -- [-10251.100] (-10247.471) (-10254.248) (-10253.253) * (-10250.048) [-10250.012] (-10254.305) (-10242.567) -- 0:14:28
608000 -- (-10235.673) (-10233.316) (-10249.774) [-10233.437] * (-10247.672) (-10252.282) [-10237.531] (-10254.788) -- 0:14:26
609000 -- [-10229.737] (-10249.772) (-10268.005) (-10257.634) * (-10250.891) (-10271.128) (-10241.600) [-10246.937] -- 0:14:24
610000 -- (-10245.871) [-10243.255] (-10269.410) (-10248.151) * (-10240.629) (-10269.801) (-10239.283) [-10234.311] -- 0:14:23
Average standard deviation of split frequencies: 0.007065
611000 -- [-10255.102] (-10240.904) (-10277.991) (-10248.205) * (-10245.555) (-10242.167) (-10247.093) [-10237.927] -- 0:14:22
612000 -- [-10245.697] (-10244.864) (-10254.019) (-10261.009) * (-10241.785) (-10254.799) [-10245.164] (-10246.136) -- 0:14:20
613000 -- (-10243.472) (-10243.821) [-10253.218] (-10252.997) * (-10254.165) (-10252.973) (-10249.917) [-10240.643] -- 0:14:18
614000 -- (-10257.607) (-10228.903) [-10245.149] (-10251.202) * (-10249.361) (-10251.697) (-10241.017) [-10240.731] -- 0:14:16
615000 -- (-10253.936) [-10233.475] (-10240.066) (-10257.528) * (-10259.825) (-10253.430) [-10238.688] (-10242.426) -- 0:14:15
Average standard deviation of split frequencies: 0.007315
616000 -- [-10231.162] (-10243.460) (-10253.138) (-10255.832) * [-10241.934] (-10270.982) (-10237.583) (-10251.652) -- 0:14:13
617000 -- [-10242.638] (-10241.974) (-10255.712) (-10236.880) * (-10249.025) (-10242.128) (-10249.453) [-10236.158] -- 0:14:11
618000 -- (-10255.830) [-10227.282] (-10239.456) (-10249.313) * (-10247.026) (-10264.974) [-10244.879] (-10247.935) -- 0:14:10
619000 -- [-10251.509] (-10237.601) (-10248.876) (-10238.871) * (-10252.101) [-10246.533] (-10239.555) (-10251.158) -- 0:14:08
620000 -- [-10248.467] (-10247.893) (-10251.383) (-10242.019) * (-10248.424) (-10252.985) (-10251.711) [-10241.570] -- 0:14:07
Average standard deviation of split frequencies: 0.007450
621000 -- (-10251.171) [-10236.718] (-10245.829) (-10252.851) * (-10242.356) [-10257.396] (-10250.229) (-10251.554) -- 0:14:05
622000 -- (-10243.980) (-10252.794) (-10258.298) [-10245.396] * (-10250.608) (-10246.914) [-10240.069] (-10259.565) -- 0:14:04
623000 -- (-10240.401) [-10245.703] (-10265.950) (-10248.860) * (-10234.143) (-10264.420) [-10241.070] (-10256.734) -- 0:14:02
624000 -- (-10231.562) [-10246.877] (-10251.200) (-10261.258) * (-10258.130) (-10239.667) (-10251.689) [-10255.274] -- 0:14:00
625000 -- (-10239.564) (-10259.561) [-10239.682] (-10258.198) * (-10248.605) (-10239.313) [-10241.106] (-10249.994) -- 0:13:58
Average standard deviation of split frequencies: 0.007530
626000 -- (-10241.310) (-10249.518) (-10253.836) [-10244.571] * (-10235.926) (-10242.575) [-10234.158] (-10241.362) -- 0:13:57
627000 -- (-10252.505) [-10249.670] (-10252.339) (-10236.084) * (-10246.328) [-10233.580] (-10248.653) (-10245.945) -- 0:13:55
628000 -- (-10264.274) (-10261.222) (-10259.393) [-10235.638] * (-10264.608) (-10248.755) [-10242.958] (-10248.021) -- 0:13:54
629000 -- (-10260.588) (-10258.274) [-10243.851] (-10255.935) * (-10259.809) [-10240.628] (-10251.697) (-10249.790) -- 0:13:52
630000 -- (-10240.091) (-10253.798) [-10237.243] (-10255.684) * (-10253.174) (-10246.424) (-10238.073) [-10247.796] -- 0:13:51
Average standard deviation of split frequencies: 0.007554
631000 -- (-10244.844) [-10244.297] (-10239.502) (-10252.605) * (-10247.761) [-10236.745] (-10247.737) (-10253.355) -- 0:13:49
632000 -- (-10257.677) (-10250.320) (-10238.411) [-10243.422] * [-10240.546] (-10252.954) (-10260.688) (-10250.314) -- 0:13:47
633000 -- (-10266.127) [-10245.983] (-10243.222) (-10261.550) * (-10246.869) [-10245.365] (-10252.386) (-10242.541) -- 0:13:46
634000 -- (-10241.351) [-10232.825] (-10239.481) (-10244.283) * [-10242.736] (-10242.981) (-10243.147) (-10237.314) -- 0:13:44
635000 -- (-10254.017) (-10242.198) (-10241.675) [-10240.188] * (-10258.972) [-10230.334] (-10237.600) (-10257.352) -- 0:13:42
Average standard deviation of split frequencies: 0.007613
636000 -- (-10245.544) (-10244.750) (-10251.811) [-10240.176] * (-10260.300) (-10245.881) (-10249.702) [-10249.856] -- 0:13:40
637000 -- (-10254.923) (-10260.894) [-10233.687] (-10241.345) * (-10256.557) (-10238.045) (-10252.308) [-10241.557] -- 0:13:39
638000 -- [-10246.040] (-10247.407) (-10249.928) (-10248.799) * (-10243.253) [-10247.439] (-10268.848) (-10253.379) -- 0:13:37
639000 -- (-10245.185) (-10253.648) [-10236.586] (-10255.821) * (-10262.208) [-10240.579] (-10256.143) (-10254.458) -- 0:13:35
640000 -- (-10242.768) [-10232.848] (-10233.378) (-10252.676) * (-10256.478) [-10236.679] (-10235.827) (-10255.662) -- 0:13:33
Average standard deviation of split frequencies: 0.007734
641000 -- [-10246.452] (-10248.728) (-10233.742) (-10246.990) * (-10248.505) (-10243.868) [-10241.119] (-10255.957) -- 0:13:32
642000 -- [-10249.376] (-10258.084) (-10230.391) (-10243.965) * (-10238.294) (-10237.310) (-10250.404) [-10237.312] -- 0:13:30
643000 -- (-10236.065) (-10258.533) [-10232.354] (-10237.337) * [-10241.198] (-10259.070) (-10247.247) (-10249.707) -- 0:13:28
644000 -- (-10249.075) (-10261.865) [-10235.681] (-10248.758) * [-10240.687] (-10250.378) (-10239.617) (-10247.595) -- 0:13:27
645000 -- (-10258.051) (-10248.457) (-10261.439) [-10255.184] * (-10254.655) (-10256.873) [-10237.502] (-10234.097) -- 0:13:25
Average standard deviation of split frequencies: 0.007583
646000 -- (-10250.135) (-10254.750) (-10253.442) [-10240.127] * (-10246.692) (-10258.299) (-10243.975) [-10237.737] -- 0:13:23
647000 -- (-10237.701) (-10242.257) (-10251.660) [-10239.078] * (-10250.814) (-10243.788) (-10257.165) [-10234.447] -- 0:13:22
648000 -- (-10253.189) (-10251.814) (-10253.269) [-10240.385] * (-10250.301) (-10234.401) [-10240.362] (-10236.668) -- 0:13:20
649000 -- (-10257.701) (-10259.452) [-10243.771] (-10235.111) * (-10254.585) (-10239.240) (-10236.282) [-10247.558] -- 0:13:18
650000 -- (-10255.068) (-10252.875) [-10242.480] (-10244.095) * (-10247.265) (-10238.165) (-10255.248) [-10233.890] -- 0:13:16
Average standard deviation of split frequencies: 0.007654
651000 -- [-10250.051] (-10264.541) (-10251.095) (-10258.925) * [-10247.790] (-10235.609) (-10270.785) (-10244.811) -- 0:13:15
652000 -- [-10248.680] (-10249.038) (-10238.206) (-10251.408) * (-10262.816) (-10250.789) [-10253.690] (-10232.932) -- 0:13:13
653000 -- (-10264.673) [-10242.076] (-10237.990) (-10247.646) * (-10256.358) (-10241.873) [-10230.903] (-10238.477) -- 0:13:11
654000 -- (-10258.743) (-10255.864) (-10235.522) [-10236.387] * (-10252.456) [-10249.195] (-10245.974) (-10255.576) -- 0:13:09
655000 -- (-10254.861) (-10245.791) (-10246.469) [-10241.170] * (-10245.550) [-10242.115] (-10251.120) (-10260.486) -- 0:13:07
Average standard deviation of split frequencies: 0.007464
656000 -- (-10246.336) (-10259.181) (-10247.243) [-10243.358] * [-10241.553] (-10232.373) (-10243.423) (-10263.647) -- 0:13:06
657000 -- (-10247.384) (-10245.252) (-10253.147) [-10242.648] * (-10265.872) [-10236.697] (-10251.409) (-10237.064) -- 0:13:04
658000 -- [-10249.829] (-10248.416) (-10255.103) (-10247.146) * (-10246.699) (-10256.769) (-10247.917) [-10235.074] -- 0:13:01
659000 -- (-10252.471) (-10255.828) (-10244.632) [-10249.529] * [-10238.195] (-10247.352) (-10251.217) (-10245.969) -- 0:12:59
660000 -- [-10235.051] (-10247.677) (-10226.841) (-10258.833) * (-10245.953) (-10257.067) [-10250.807] (-10262.828) -- 0:12:56
Average standard deviation of split frequencies: 0.007942
661000 -- (-10233.269) [-10241.376] (-10245.628) (-10250.513) * (-10243.271) (-10254.299) [-10244.128] (-10271.569) -- 0:12:54
662000 -- (-10259.980) [-10232.409] (-10239.372) (-10246.536) * (-10246.247) (-10259.486) [-10244.299] (-10257.631) -- 0:12:51
663000 -- (-10251.573) [-10243.949] (-10262.151) (-10240.397) * (-10248.337) (-10241.907) [-10245.374] (-10248.788) -- 0:12:49
664000 -- (-10241.123) [-10235.806] (-10267.006) (-10247.835) * (-10257.998) (-10239.676) [-10237.696] (-10249.533) -- 0:12:47
665000 -- (-10238.893) (-10246.765) (-10265.600) [-10238.199] * (-10249.888) [-10243.019] (-10250.508) (-10256.700) -- 0:12:44
Average standard deviation of split frequencies: 0.007771
666000 -- (-10239.693) [-10248.677] (-10245.644) (-10258.420) * (-10251.593) (-10266.443) (-10247.284) [-10252.287] -- 0:12:42
667000 -- (-10249.021) [-10233.083] (-10250.251) (-10255.148) * (-10251.007) (-10240.405) [-10248.237] (-10249.834) -- 0:12:40
668000 -- (-10247.370) (-10246.866) [-10251.869] (-10240.529) * (-10252.755) [-10241.355] (-10254.789) (-10242.075) -- 0:12:37
669000 -- [-10252.420] (-10249.773) (-10246.009) (-10249.370) * (-10259.895) (-10231.730) [-10241.458] (-10257.213) -- 0:12:35
670000 -- [-10246.607] (-10263.772) (-10252.531) (-10248.292) * (-10249.348) (-10241.526) [-10232.659] (-10248.281) -- 0:12:33
Average standard deviation of split frequencies: 0.007457
671000 -- (-10252.769) (-10257.680) (-10245.177) [-10255.398] * (-10250.955) (-10250.275) [-10230.475] (-10235.713) -- 0:12:30
672000 -- (-10248.381) (-10243.427) [-10250.286] (-10251.550) * (-10248.129) (-10265.995) [-10241.806] (-10239.648) -- 0:12:28
673000 -- (-10243.947) [-10249.887] (-10252.348) (-10242.441) * (-10256.550) (-10249.215) (-10242.788) [-10240.380] -- 0:12:25
674000 -- (-10249.584) (-10237.642) (-10256.012) [-10235.424] * (-10236.575) (-10247.693) [-10243.321] (-10270.407) -- 0:12:23
675000 -- (-10252.890) (-10238.517) [-10234.203] (-10241.125) * (-10246.871) (-10249.956) [-10244.578] (-10249.593) -- 0:12:21
Average standard deviation of split frequencies: 0.007500
676000 -- (-10252.699) [-10245.380] (-10236.841) (-10239.460) * (-10256.277) [-10240.156] (-10264.389) (-10257.793) -- 0:12:18
677000 -- (-10264.414) (-10241.111) (-10240.367) [-10241.088] * [-10241.313] (-10242.410) (-10245.840) (-10262.486) -- 0:12:16
678000 -- (-10269.724) [-10249.480] (-10242.614) (-10244.724) * (-10244.063) [-10243.399] (-10239.377) (-10251.692) -- 0:12:14
679000 -- (-10257.499) (-10264.347) [-10248.004] (-10237.863) * [-10247.384] (-10256.231) (-10245.937) (-10258.800) -- 0:12:11
680000 -- (-10256.809) (-10266.342) (-10245.385) [-10230.278] * (-10248.336) (-10245.010) [-10240.576] (-10246.352) -- 0:12:09
Average standard deviation of split frequencies: 0.007295
681000 -- (-10247.853) (-10263.773) (-10252.683) [-10236.276] * (-10246.267) (-10242.583) (-10245.209) [-10250.497] -- 0:12:07
682000 -- (-10237.896) (-10247.685) [-10247.693] (-10255.597) * (-10243.074) (-10254.566) [-10246.556] (-10258.547) -- 0:12:04
683000 -- [-10234.933] (-10246.811) (-10247.826) (-10257.629) * (-10245.811) [-10246.186] (-10249.271) (-10243.798) -- 0:12:02
684000 -- [-10248.321] (-10242.286) (-10245.877) (-10256.183) * [-10246.132] (-10242.793) (-10250.096) (-10241.501) -- 0:11:59
685000 -- (-10244.327) (-10250.075) (-10251.446) [-10241.730] * (-10249.054) (-10245.934) (-10247.954) [-10245.521] -- 0:11:57
Average standard deviation of split frequencies: 0.007254
686000 -- [-10244.447] (-10259.330) (-10261.606) (-10247.448) * (-10265.365) (-10242.783) [-10250.008] (-10267.032) -- 0:11:54
687000 -- (-10260.703) (-10250.342) (-10257.939) [-10245.835] * (-10249.350) (-10247.432) [-10244.338] (-10250.282) -- 0:11:52
688000 -- (-10248.030) (-10259.590) (-10253.605) [-10241.596] * [-10242.471] (-10255.046) (-10252.644) (-10248.756) -- 0:11:50
689000 -- [-10238.717] (-10273.013) (-10246.902) (-10251.497) * (-10233.560) [-10240.686] (-10263.445) (-10259.664) -- 0:11:47
690000 -- (-10250.035) (-10262.562) [-10240.838] (-10240.263) * (-10242.038) [-10237.780] (-10259.776) (-10257.207) -- 0:11:45
Average standard deviation of split frequencies: 0.007384
691000 -- [-10243.104] (-10242.022) (-10239.193) (-10250.817) * (-10245.849) (-10233.812) (-10238.892) [-10232.938] -- 0:11:43
692000 -- (-10246.852) (-10252.244) (-10248.964) [-10238.531] * (-10238.653) (-10235.901) (-10257.695) [-10249.265] -- 0:11:41
693000 -- (-10256.599) (-10249.184) (-10248.481) [-10235.994] * [-10230.527] (-10240.671) (-10259.526) (-10237.421) -- 0:11:38
694000 -- (-10264.055) (-10266.854) [-10247.859] (-10250.215) * [-10229.799] (-10249.348) (-10248.650) (-10249.183) -- 0:11:36
695000 -- (-10255.318) (-10245.566) [-10240.964] (-10241.742) * [-10233.677] (-10268.065) (-10245.541) (-10247.653) -- 0:11:33
Average standard deviation of split frequencies: 0.007531
696000 -- (-10258.681) (-10244.347) [-10231.328] (-10247.367) * (-10265.025) (-10252.743) (-10243.428) [-10245.222] -- 0:11:31
697000 -- (-10245.987) (-10259.084) [-10242.741] (-10258.865) * (-10261.758) (-10232.678) [-10254.736] (-10244.026) -- 0:11:29
698000 -- (-10261.532) [-10238.907] (-10253.990) (-10257.859) * (-10258.384) (-10253.245) (-10241.833) [-10245.761] -- 0:11:26
699000 -- (-10249.043) [-10233.905] (-10252.675) (-10252.152) * [-10249.283] (-10239.765) (-10255.530) (-10240.137) -- 0:11:24
700000 -- (-10249.806) (-10246.113) [-10245.903] (-10252.943) * [-10239.946] (-10248.259) (-10258.101) (-10248.776) -- 0:11:21
Average standard deviation of split frequencies: 0.007337
701000 -- [-10246.372] (-10245.560) (-10251.599) (-10242.974) * (-10255.268) (-10260.063) (-10261.660) [-10233.086] -- 0:11:19
702000 -- (-10246.835) (-10248.370) [-10240.179] (-10259.179) * (-10260.849) (-10246.310) [-10238.920] (-10255.577) -- 0:11:17
703000 -- (-10244.378) (-10259.329) [-10237.425] (-10246.053) * (-10250.217) [-10237.562] (-10240.067) (-10261.915) -- 0:11:15
704000 -- (-10251.646) [-10249.584] (-10248.854) (-10242.729) * [-10243.657] (-10239.284) (-10251.823) (-10256.309) -- 0:11:12
705000 -- (-10248.049) [-10230.247] (-10236.282) (-10255.512) * (-10248.551) (-10249.697) [-10251.177] (-10256.021) -- 0:11:10
Average standard deviation of split frequencies: 0.007072
706000 -- (-10244.431) (-10240.562) [-10242.102] (-10258.869) * [-10232.130] (-10245.676) (-10240.797) (-10242.356) -- 0:11:07
707000 -- [-10233.938] (-10233.649) (-10256.835) (-10255.759) * (-10246.433) [-10236.094] (-10230.713) (-10254.576) -- 0:11:05
708000 -- (-10234.258) (-10243.002) (-10272.333) [-10231.332] * (-10241.077) (-10252.152) [-10240.313] (-10263.608) -- 0:11:03
709000 -- (-10245.799) [-10241.129] (-10264.582) (-10262.331) * [-10238.182] (-10245.828) (-10235.456) (-10243.522) -- 0:11:00
710000 -- (-10239.213) [-10236.264] (-10248.445) (-10236.377) * (-10260.821) (-10246.005) [-10248.279] (-10237.145) -- 0:10:58
Average standard deviation of split frequencies: 0.007075
711000 -- (-10254.550) (-10230.075) (-10249.397) [-10248.675] * [-10252.011] (-10247.652) (-10243.344) (-10250.009) -- 0:10:56
712000 -- (-10261.846) (-10248.855) [-10248.930] (-10249.623) * (-10247.358) [-10232.326] (-10244.892) (-10251.367) -- 0:10:54
713000 -- (-10246.918) (-10239.552) (-10258.245) [-10238.022] * (-10263.100) (-10237.607) [-10238.506] (-10260.007) -- 0:10:51
714000 -- (-10254.703) (-10249.275) [-10256.362] (-10243.230) * (-10246.557) (-10249.653) [-10229.112] (-10243.618) -- 0:10:49
715000 -- (-10252.877) [-10240.354] (-10252.354) (-10236.914) * (-10243.362) (-10241.682) [-10234.229] (-10253.104) -- 0:10:46
Average standard deviation of split frequencies: 0.007491
716000 -- (-10241.471) [-10246.749] (-10256.529) (-10258.874) * (-10256.309) (-10248.120) (-10228.976) [-10248.563] -- 0:10:44
717000 -- (-10235.865) [-10256.624] (-10251.122) (-10255.813) * [-10246.815] (-10252.278) (-10230.545) (-10269.813) -- 0:10:42
718000 -- (-10237.924) [-10247.709] (-10250.955) (-10248.106) * (-10243.074) (-10264.441) (-10247.906) [-10236.243] -- 0:10:39
719000 -- (-10241.166) [-10238.728] (-10251.767) (-10243.168) * (-10247.267) [-10250.475] (-10248.646) (-10258.620) -- 0:10:37
720000 -- [-10239.166] (-10248.940) (-10231.279) (-10251.442) * (-10242.003) (-10241.630) (-10237.654) [-10235.125] -- 0:10:35
Average standard deviation of split frequencies: 0.007754
721000 -- (-10246.485) (-10244.920) (-10250.507) [-10240.314] * [-10247.255] (-10253.414) (-10255.154) (-10245.505) -- 0:10:33
722000 -- (-10251.231) [-10234.238] (-10249.189) (-10254.511) * (-10238.682) (-10242.790) [-10240.086] (-10244.350) -- 0:10:30
723000 -- (-10243.263) (-10244.457) (-10252.139) [-10229.044] * (-10239.813) [-10238.063] (-10239.203) (-10251.175) -- 0:10:28
724000 -- (-10243.366) (-10246.830) [-10235.553] (-10244.125) * (-10235.873) (-10249.695) [-10234.649] (-10254.738) -- 0:10:25
725000 -- (-10241.393) (-10243.496) (-10256.471) [-10243.341] * (-10246.664) (-10232.064) (-10243.457) [-10237.379] -- 0:10:23
Average standard deviation of split frequencies: 0.007734
726000 -- (-10250.683) (-10240.673) [-10257.629] (-10259.078) * [-10248.165] (-10252.489) (-10246.033) (-10259.208) -- 0:10:21
727000 -- (-10234.135) [-10235.523] (-10251.313) (-10268.760) * (-10251.443) (-10245.502) [-10251.288] (-10253.374) -- 0:10:18
728000 -- (-10251.584) [-10238.257] (-10247.288) (-10268.045) * (-10243.571) (-10271.268) (-10261.230) [-10237.226] -- 0:10:16
729000 -- (-10258.133) [-10240.441] (-10262.069) (-10271.667) * (-10245.533) [-10241.468] (-10239.385) (-10252.630) -- 0:10:14
730000 -- (-10243.375) [-10236.361] (-10247.340) (-10248.917) * (-10239.733) (-10252.337) (-10247.319) [-10245.530] -- 0:10:11
Average standard deviation of split frequencies: 0.007774
731000 -- (-10244.852) [-10230.242] (-10244.783) (-10241.518) * [-10236.952] (-10246.674) (-10242.728) (-10250.450) -- 0:10:09
732000 -- (-10246.338) (-10242.480) [-10236.857] (-10258.766) * (-10244.463) (-10251.479) [-10242.456] (-10266.524) -- 0:10:07
733000 -- [-10247.649] (-10248.081) (-10243.704) (-10254.575) * (-10239.260) (-10241.062) [-10248.259] (-10253.616) -- 0:10:05
734000 -- [-10237.245] (-10257.435) (-10240.568) (-10256.140) * (-10245.516) [-10243.894] (-10235.602) (-10244.177) -- 0:10:02
735000 -- [-10240.421] (-10257.553) (-10246.020) (-10237.249) * (-10233.323) [-10227.405] (-10269.164) (-10245.037) -- 0:10:00
Average standard deviation of split frequencies: 0.007858
736000 -- (-10264.133) (-10254.408) [-10238.589] (-10251.752) * [-10233.826] (-10235.483) (-10248.887) (-10260.596) -- 0:09:57
737000 -- (-10276.854) (-10271.513) [-10244.009] (-10249.268) * (-10240.077) [-10243.491] (-10242.679) (-10243.975) -- 0:09:55
738000 -- [-10241.907] (-10235.569) (-10252.410) (-10252.126) * (-10230.886) (-10267.772) [-10245.679] (-10247.273) -- 0:09:53
739000 -- (-10245.265) (-10246.329) [-10241.232] (-10251.214) * (-10252.825) [-10247.937] (-10242.163) (-10262.983) -- 0:09:50
740000 -- (-10262.427) (-10251.299) (-10255.717) [-10258.049] * (-10235.257) (-10252.876) (-10252.048) [-10244.939] -- 0:09:48
Average standard deviation of split frequencies: 0.007560
741000 -- (-10257.974) [-10246.269] (-10255.336) (-10251.648) * (-10253.248) [-10244.596] (-10251.638) (-10255.259) -- 0:09:46
742000 -- (-10262.701) [-10247.987] (-10256.842) (-10246.702) * (-10258.377) [-10245.505] (-10257.423) (-10239.972) -- 0:09:43
743000 -- (-10239.147) (-10258.598) [-10236.415] (-10265.169) * (-10255.182) (-10251.335) (-10265.624) [-10236.718] -- 0:09:41
744000 -- (-10248.720) [-10237.863] (-10236.041) (-10243.508) * (-10265.082) (-10253.667) [-10247.217] (-10236.927) -- 0:09:39
745000 -- (-10246.055) [-10241.769] (-10244.378) (-10243.356) * (-10257.789) (-10246.617) (-10252.042) [-10233.080] -- 0:09:37
Average standard deviation of split frequencies: 0.007824
746000 -- [-10252.876] (-10246.999) (-10243.198) (-10259.532) * [-10236.633] (-10237.628) (-10260.496) (-10248.146) -- 0:09:34
747000 -- (-10254.782) (-10255.617) (-10247.510) [-10239.129] * (-10246.698) (-10238.986) [-10230.342] (-10246.037) -- 0:09:32
748000 -- (-10238.642) (-10243.583) [-10246.273] (-10232.126) * [-10238.011] (-10239.139) (-10241.933) (-10237.619) -- 0:09:30
749000 -- (-10248.246) (-10257.352) [-10245.403] (-10251.124) * (-10247.902) [-10234.678] (-10247.124) (-10252.497) -- 0:09:27
750000 -- (-10257.095) (-10261.477) (-10248.313) [-10232.801] * (-10244.676) [-10245.482] (-10248.760) (-10242.535) -- 0:09:25
Average standard deviation of split frequencies: 0.007667
751000 -- (-10246.833) (-10261.045) (-10240.864) [-10234.949] * (-10250.650) (-10243.292) [-10241.451] (-10243.070) -- 0:09:22
752000 -- [-10249.162] (-10237.462) (-10249.651) (-10244.221) * (-10252.208) [-10241.784] (-10238.817) (-10257.723) -- 0:09:20
753000 -- (-10241.724) (-10244.705) [-10240.074] (-10252.333) * [-10232.798] (-10270.852) (-10242.612) (-10240.343) -- 0:09:18
754000 -- [-10233.620] (-10242.957) (-10236.936) (-10249.898) * [-10234.681] (-10243.928) (-10250.520) (-10243.335) -- 0:09:16
755000 -- (-10257.568) [-10245.191] (-10247.222) (-10240.456) * (-10231.608) [-10244.422] (-10243.063) (-10250.399) -- 0:09:13
Average standard deviation of split frequencies: 0.007541
756000 -- (-10249.710) (-10232.048) [-10249.766] (-10228.435) * [-10245.386] (-10251.776) (-10257.626) (-10246.000) -- 0:09:11
757000 -- (-10241.401) (-10259.926) (-10240.273) [-10229.171] * [-10232.197] (-10254.340) (-10259.199) (-10257.998) -- 0:09:09
758000 -- [-10240.662] (-10256.060) (-10253.080) (-10250.653) * [-10232.009] (-10250.975) (-10253.783) (-10248.490) -- 0:09:07
759000 -- (-10255.380) (-10243.389) (-10252.130) [-10256.315] * [-10226.259] (-10266.407) (-10249.022) (-10248.093) -- 0:09:04
760000 -- [-10249.958] (-10244.465) (-10254.461) (-10253.697) * (-10234.831) (-10249.184) (-10256.015) [-10254.972] -- 0:09:02
Average standard deviation of split frequencies: 0.007509
761000 -- (-10253.627) (-10235.047) (-10247.522) [-10245.332] * (-10240.786) [-10232.275] (-10261.697) (-10252.327) -- 0:09:00
762000 -- (-10258.340) (-10249.383) (-10238.646) [-10238.345] * (-10244.217) (-10247.483) (-10263.348) [-10241.661] -- 0:08:57
763000 -- [-10238.968] (-10247.892) (-10253.236) (-10245.681) * (-10241.338) (-10244.197) (-10272.761) [-10241.778] -- 0:08:55
764000 -- (-10235.839) (-10257.958) (-10256.962) [-10243.736] * (-10246.914) (-10248.779) [-10248.880] (-10247.721) -- 0:08:53
765000 -- (-10242.509) (-10259.676) (-10259.601) [-10240.042] * (-10231.705) (-10269.281) (-10247.941) [-10240.649] -- 0:08:51
Average standard deviation of split frequencies: 0.007585
766000 -- (-10262.179) (-10246.125) [-10249.387] (-10255.090) * (-10254.687) (-10248.194) (-10239.471) [-10234.373] -- 0:08:48
767000 -- [-10250.207] (-10248.043) (-10259.790) (-10248.316) * (-10232.856) (-10238.556) (-10248.527) [-10235.590] -- 0:08:46
768000 -- [-10224.244] (-10257.344) (-10260.509) (-10249.364) * (-10238.952) (-10260.394) [-10236.334] (-10244.488) -- 0:08:44
769000 -- (-10250.451) (-10266.169) [-10243.846] (-10257.758) * [-10242.613] (-10264.314) (-10246.238) (-10246.820) -- 0:08:41
770000 -- (-10240.617) (-10259.767) [-10251.037] (-10234.387) * (-10252.306) (-10257.609) (-10257.890) [-10242.452] -- 0:08:39
Average standard deviation of split frequencies: 0.007369
771000 -- [-10232.904] (-10245.553) (-10248.232) (-10239.078) * (-10245.786) (-10254.495) (-10243.435) [-10245.170] -- 0:08:37
772000 -- (-10236.916) (-10261.622) [-10238.346] (-10236.572) * (-10254.899) [-10242.269] (-10242.740) (-10245.790) -- 0:08:34
773000 -- (-10248.984) (-10255.359) [-10237.103] (-10235.158) * [-10239.412] (-10242.260) (-10244.248) (-10241.045) -- 0:08:32
774000 -- (-10253.647) (-10253.984) (-10248.944) [-10243.381] * [-10235.219] (-10247.677) (-10253.355) (-10246.373) -- 0:08:30
775000 -- (-10241.165) (-10231.817) (-10246.084) [-10242.846] * (-10237.200) (-10242.403) [-10250.553] (-10252.916) -- 0:08:27
Average standard deviation of split frequencies: 0.007262
776000 -- (-10244.641) [-10245.920] (-10248.048) (-10247.408) * (-10261.115) (-10265.083) (-10252.295) [-10243.349] -- 0:08:25
777000 -- (-10245.141) (-10255.806) (-10242.224) [-10231.023] * [-10251.926] (-10250.271) (-10248.156) (-10242.927) -- 0:08:23
778000 -- [-10253.126] (-10264.861) (-10245.396) (-10251.809) * (-10262.875) [-10238.996] (-10261.685) (-10238.261) -- 0:08:21
779000 -- [-10255.702] (-10255.793) (-10250.109) (-10254.393) * (-10250.201) (-10253.206) [-10238.534] (-10254.764) -- 0:08:18
780000 -- (-10250.784) (-10256.117) (-10249.276) [-10239.630] * [-10245.218] (-10247.317) (-10234.088) (-10245.553) -- 0:08:16
Average standard deviation of split frequencies: 0.007315
781000 -- (-10244.073) (-10261.725) [-10252.030] (-10247.497) * (-10248.305) [-10245.750] (-10248.777) (-10245.358) -- 0:08:14
782000 -- [-10241.222] (-10256.681) (-10250.122) (-10251.610) * (-10249.941) [-10242.362] (-10269.786) (-10241.085) -- 0:08:11
783000 -- [-10237.463] (-10253.867) (-10245.108) (-10241.417) * [-10244.648] (-10246.719) (-10245.900) (-10256.550) -- 0:08:09
784000 -- (-10241.041) (-10253.495) [-10246.804] (-10255.825) * [-10246.187] (-10245.903) (-10242.694) (-10256.573) -- 0:08:07
785000 -- (-10239.070) (-10257.383) (-10257.603) [-10240.769] * (-10249.681) [-10227.710] (-10258.472) (-10255.117) -- 0:08:04
Average standard deviation of split frequencies: 0.007384
786000 -- (-10236.542) (-10277.237) [-10260.715] (-10236.028) * (-10249.207) (-10239.468) [-10251.355] (-10266.691) -- 0:08:02
787000 -- (-10238.849) (-10256.601) [-10244.821] (-10252.851) * (-10246.396) [-10235.415] (-10283.580) (-10253.301) -- 0:08:00
788000 -- [-10237.858] (-10245.237) (-10250.565) (-10243.948) * (-10246.180) (-10246.916) [-10247.320] (-10257.891) -- 0:07:58
789000 -- (-10248.716) (-10242.099) (-10269.468) [-10238.673] * (-10245.190) (-10245.490) (-10256.124) [-10247.623] -- 0:07:55
790000 -- (-10245.571) (-10261.178) (-10274.245) [-10239.696] * (-10255.727) (-10248.712) [-10236.483] (-10254.544) -- 0:07:53
Average standard deviation of split frequencies: 0.007019
791000 -- (-10253.742) (-10246.579) (-10249.749) [-10236.011] * (-10248.728) [-10238.573] (-10251.985) (-10243.145) -- 0:07:51
792000 -- (-10245.474) [-10244.249] (-10249.406) (-10235.661) * (-10262.042) (-10238.362) [-10238.782] (-10236.349) -- 0:07:48
793000 -- (-10234.070) [-10236.231] (-10244.681) (-10240.985) * (-10252.542) [-10264.756] (-10241.951) (-10248.173) -- 0:07:46
794000 -- (-10245.741) (-10270.863) (-10241.335) [-10254.325] * (-10249.944) (-10251.469) [-10239.998] (-10272.773) -- 0:07:44
795000 -- [-10249.843] (-10250.382) (-10237.017) (-10256.898) * (-10246.973) (-10263.095) (-10242.571) [-10248.068] -- 0:07:42
Average standard deviation of split frequencies: 0.007282
796000 -- (-10233.814) [-10251.421] (-10264.313) (-10252.478) * (-10246.825) (-10253.593) [-10239.872] (-10251.181) -- 0:07:39
797000 -- [-10235.161] (-10245.690) (-10247.926) (-10246.351) * (-10231.578) (-10251.049) (-10240.464) [-10251.989] -- 0:07:37
798000 -- [-10233.798] (-10242.495) (-10263.487) (-10254.695) * (-10243.019) (-10267.065) (-10236.935) [-10231.303] -- 0:07:35
799000 -- [-10235.699] (-10240.703) (-10256.355) (-10266.529) * (-10259.032) (-10244.684) [-10228.987] (-10251.234) -- 0:07:32
800000 -- (-10239.343) (-10233.162) (-10239.306) [-10240.059] * [-10252.321] (-10247.278) (-10237.903) (-10261.952) -- 0:07:30
Average standard deviation of split frequencies: 0.007093
801000 -- [-10239.870] (-10249.497) (-10259.092) (-10241.909) * (-10253.859) (-10247.247) [-10238.179] (-10251.218) -- 0:07:28
802000 -- (-10259.720) (-10239.617) [-10241.074] (-10255.558) * (-10245.194) (-10244.606) (-10246.056) [-10233.120] -- 0:07:26
803000 -- (-10250.576) (-10244.137) (-10251.586) [-10234.593] * (-10237.993) (-10242.531) (-10249.959) [-10242.572] -- 0:07:23
804000 -- [-10239.046] (-10246.501) (-10247.532) (-10246.291) * (-10243.177) (-10244.477) (-10258.034) [-10244.488] -- 0:07:21
805000 -- (-10254.826) (-10252.131) (-10258.013) [-10242.958] * (-10241.302) (-10236.219) (-10247.595) [-10240.148] -- 0:07:19
Average standard deviation of split frequencies: 0.006935
806000 -- (-10234.153) (-10262.582) [-10244.059] (-10250.947) * (-10259.145) (-10249.417) [-10244.554] (-10249.250) -- 0:07:16
807000 -- (-10229.594) (-10244.624) [-10245.063] (-10269.267) * [-10239.571] (-10260.284) (-10238.553) (-10266.122) -- 0:07:14
808000 -- [-10233.113] (-10242.252) (-10241.103) (-10251.281) * (-10243.159) (-10257.606) (-10234.154) [-10235.536] -- 0:07:12
809000 -- (-10242.332) [-10247.051] (-10244.030) (-10250.734) * (-10242.475) (-10243.600) (-10247.690) [-10244.703] -- 0:07:09
810000 -- [-10238.469] (-10244.626) (-10256.885) (-10244.365) * (-10251.421) [-10239.605] (-10241.379) (-10245.764) -- 0:07:07
Average standard deviation of split frequencies: 0.006745
811000 -- (-10241.672) (-10244.218) (-10241.959) [-10255.422] * (-10262.551) (-10245.574) [-10245.576] (-10249.892) -- 0:07:05
812000 -- (-10253.912) (-10250.337) [-10237.652] (-10254.106) * (-10253.288) (-10251.296) [-10237.224] (-10252.283) -- 0:07:02
813000 -- (-10244.033) (-10250.132) (-10245.457) [-10246.364] * (-10269.901) (-10248.140) [-10239.484] (-10248.168) -- 0:07:00
814000 -- [-10245.596] (-10261.815) (-10252.210) (-10242.289) * (-10260.871) (-10248.624) [-10247.710] (-10261.610) -- 0:06:58
815000 -- (-10257.239) (-10246.560) [-10238.560] (-10243.364) * [-10237.004] (-10235.140) (-10252.937) (-10251.387) -- 0:06:56
Average standard deviation of split frequencies: 0.006298
816000 -- [-10239.167] (-10259.411) (-10246.471) (-10253.420) * (-10241.445) (-10239.891) [-10242.493] (-10249.554) -- 0:06:53
817000 -- (-10256.443) (-10278.867) [-10236.772] (-10242.145) * (-10250.611) (-10235.438) [-10242.344] (-10241.472) -- 0:06:51
818000 -- [-10251.470] (-10261.725) (-10242.837) (-10255.287) * [-10243.108] (-10250.201) (-10253.344) (-10236.132) -- 0:06:49
819000 -- (-10255.483) [-10247.529] (-10245.225) (-10263.650) * [-10242.286] (-10249.292) (-10251.367) (-10245.365) -- 0:06:47
820000 -- [-10242.103] (-10245.880) (-10243.133) (-10248.697) * [-10241.157] (-10245.546) (-10250.855) (-10254.669) -- 0:06:44
Average standard deviation of split frequencies: 0.006721
821000 -- (-10245.864) (-10236.541) [-10242.344] (-10238.181) * (-10245.064) (-10238.891) (-10245.269) [-10243.914] -- 0:06:42
822000 -- (-10245.942) (-10238.979) (-10252.519) [-10232.126] * (-10247.498) (-10243.588) [-10241.930] (-10241.726) -- 0:06:40
823000 -- (-10238.836) (-10244.239) [-10246.202] (-10252.438) * (-10252.807) [-10248.124] (-10255.875) (-10248.361) -- 0:06:37
824000 -- (-10252.542) [-10247.775] (-10243.945) (-10235.610) * (-10252.408) [-10238.918] (-10257.048) (-10251.443) -- 0:06:35
825000 -- (-10245.934) (-10241.268) (-10246.402) [-10236.306] * [-10233.644] (-10240.818) (-10241.602) (-10243.313) -- 0:06:33
Average standard deviation of split frequencies: 0.006713
826000 -- [-10243.454] (-10241.348) (-10249.414) (-10245.574) * [-10239.479] (-10240.569) (-10266.916) (-10241.422) -- 0:06:31
827000 -- (-10251.420) [-10237.563] (-10238.867) (-10245.000) * (-10243.360) [-10241.644] (-10248.865) (-10242.637) -- 0:06:28
828000 -- (-10249.087) (-10257.334) [-10242.626] (-10256.272) * (-10249.865) (-10244.088) (-10245.476) [-10236.836] -- 0:06:26
829000 -- [-10231.760] (-10248.141) (-10246.904) (-10263.459) * (-10245.874) [-10235.314] (-10246.433) (-10248.172) -- 0:06:24
830000 -- (-10252.990) [-10242.048] (-10243.165) (-10240.482) * (-10237.053) (-10237.503) [-10234.067] (-10239.322) -- 0:06:21
Average standard deviation of split frequencies: 0.007087
831000 -- [-10243.790] (-10269.541) (-10250.061) (-10243.000) * [-10243.424] (-10249.918) (-10248.353) (-10245.819) -- 0:06:19
832000 -- (-10244.450) (-10244.336) [-10244.095] (-10258.145) * [-10231.223] (-10239.503) (-10247.703) (-10250.785) -- 0:06:17
833000 -- (-10236.360) (-10254.776) [-10253.808] (-10249.058) * [-10236.362] (-10260.557) (-10249.329) (-10237.424) -- 0:06:15
834000 -- (-10264.307) (-10257.391) [-10249.544] (-10252.059) * (-10248.630) (-10242.241) [-10245.482] (-10258.636) -- 0:06:12
835000 -- (-10257.911) (-10257.622) [-10265.092] (-10260.821) * (-10259.323) [-10238.316] (-10237.335) (-10253.351) -- 0:06:10
Average standard deviation of split frequencies: 0.007228
836000 -- (-10271.695) (-10255.762) [-10235.179] (-10243.963) * (-10251.511) (-10246.843) [-10236.116] (-10245.400) -- 0:06:08
837000 -- (-10250.654) (-10252.803) [-10233.750] (-10232.160) * (-10247.165) [-10245.251] (-10248.916) (-10237.526) -- 0:06:06
838000 -- (-10242.640) (-10270.013) (-10229.302) [-10234.779] * (-10252.704) [-10251.845] (-10239.270) (-10259.923) -- 0:06:03
839000 -- (-10247.933) (-10253.757) [-10239.729] (-10249.653) * (-10250.987) (-10239.091) (-10257.232) [-10243.909] -- 0:06:01
840000 -- (-10236.147) (-10258.361) (-10245.658) [-10235.661] * [-10247.625] (-10251.409) (-10248.756) (-10247.225) -- 0:05:59
Average standard deviation of split frequencies: 0.007238
841000 -- [-10230.912] (-10259.616) (-10254.888) (-10232.062) * (-10236.672) (-10250.173) (-10244.267) [-10244.986] -- 0:05:56
842000 -- (-10242.957) [-10251.167] (-10255.575) (-10244.385) * [-10236.041] (-10243.612) (-10259.425) (-10231.481) -- 0:05:54
843000 -- [-10237.616] (-10250.914) (-10261.477) (-10253.939) * (-10236.867) (-10246.573) [-10238.979] (-10233.866) -- 0:05:52
844000 -- [-10248.082] (-10248.365) (-10249.393) (-10244.292) * (-10234.454) (-10234.647) (-10248.384) [-10237.325] -- 0:05:50
845000 -- (-10231.418) (-10256.453) [-10237.195] (-10257.255) * (-10274.288) (-10249.742) [-10240.326] (-10248.733) -- 0:05:47
Average standard deviation of split frequencies: 0.007345
846000 -- [-10241.299] (-10244.119) (-10260.084) (-10252.945) * (-10249.088) [-10232.333] (-10246.402) (-10244.640) -- 0:05:45
847000 -- (-10243.992) (-10267.324) [-10235.191] (-10239.977) * (-10256.736) [-10243.906] (-10238.797) (-10258.153) -- 0:05:43
848000 -- (-10247.437) (-10261.701) (-10233.634) [-10244.434] * (-10255.367) (-10250.998) [-10247.176] (-10258.512) -- 0:05:41
849000 -- (-10236.856) (-10254.496) (-10252.818) [-10233.628] * (-10247.447) [-10248.879] (-10242.440) (-10261.796) -- 0:05:38
850000 -- (-10247.609) [-10241.056] (-10250.275) (-10243.319) * (-10256.611) (-10259.271) [-10246.363] (-10248.006) -- 0:05:36
Average standard deviation of split frequencies: 0.007582
851000 -- (-10245.940) [-10236.927] (-10241.762) (-10246.579) * (-10264.423) [-10247.096] (-10249.952) (-10248.043) -- 0:05:34
852000 -- (-10257.181) (-10246.371) [-10243.235] (-10239.898) * (-10253.533) (-10248.310) [-10241.912] (-10246.067) -- 0:05:32
853000 -- (-10258.004) (-10257.082) (-10257.641) [-10244.481] * (-10253.612) [-10236.652] (-10239.583) (-10258.934) -- 0:05:30
854000 -- (-10250.946) (-10247.114) (-10269.343) [-10251.920] * (-10257.053) (-10240.577) [-10236.600] (-10244.915) -- 0:05:28
855000 -- (-10255.358) [-10245.354] (-10255.792) (-10230.565) * (-10239.505) (-10232.479) [-10234.972] (-10265.105) -- 0:05:26
Average standard deviation of split frequencies: 0.007522
856000 -- (-10260.178) (-10241.841) (-10248.320) [-10245.028] * (-10248.555) (-10251.646) [-10246.817] (-10261.833) -- 0:05:24
857000 -- (-10252.071) [-10241.149] (-10263.606) (-10254.470) * (-10256.099) (-10249.294) (-10243.963) [-10248.671] -- 0:05:22
858000 -- [-10250.209] (-10242.089) (-10263.181) (-10244.501) * (-10247.653) (-10244.450) [-10246.228] (-10258.160) -- 0:05:20
859000 -- (-10262.429) [-10233.401] (-10251.337) (-10231.891) * [-10235.786] (-10243.549) (-10241.173) (-10265.946) -- 0:05:17
860000 -- [-10255.478] (-10254.026) (-10247.841) (-10261.127) * (-10242.153) [-10240.590] (-10252.533) (-10258.629) -- 0:05:15
Average standard deviation of split frequencies: 0.007531
861000 -- (-10242.218) (-10244.331) (-10247.591) [-10234.947] * (-10252.875) (-10255.091) (-10250.653) [-10231.553] -- 0:05:13
862000 -- (-10246.767) [-10245.665] (-10246.248) (-10239.646) * (-10268.230) (-10243.530) (-10265.150) [-10247.710] -- 0:05:11
863000 -- [-10256.030] (-10260.963) (-10245.144) (-10244.583) * (-10254.441) (-10240.574) [-10238.196] (-10248.002) -- 0:05:09
864000 -- (-10271.956) (-10239.268) (-10241.958) [-10242.862] * (-10247.444) [-10239.696] (-10254.625) (-10244.383) -- 0:05:07
865000 -- [-10253.363] (-10243.250) (-10247.814) (-10232.481) * (-10275.878) [-10238.601] (-10250.242) (-10251.622) -- 0:05:05
Average standard deviation of split frequencies: 0.007510
866000 -- (-10237.766) (-10247.224) (-10245.972) [-10236.809] * [-10245.047] (-10242.823) (-10235.821) (-10245.239) -- 0:05:03
867000 -- (-10245.761) (-10251.707) (-10244.139) [-10231.725] * [-10236.661] (-10246.584) (-10256.362) (-10235.940) -- 0:05:00
868000 -- (-10249.011) (-10258.803) (-10243.311) [-10226.879] * (-10239.363) [-10239.500] (-10259.984) (-10237.749) -- 0:04:58
869000 -- (-10249.190) (-10252.207) (-10252.693) [-10234.458] * (-10241.726) (-10235.245) [-10241.119] (-10251.113) -- 0:04:56
870000 -- [-10244.802] (-10238.445) (-10249.493) (-10247.071) * [-10223.587] (-10242.266) (-10246.975) (-10252.156) -- 0:04:54
Average standard deviation of split frequencies: 0.007668
871000 -- (-10249.303) [-10238.274] (-10255.582) (-10255.178) * [-10240.054] (-10243.282) (-10235.234) (-10253.110) -- 0:04:52
872000 -- (-10258.172) (-10242.406) [-10253.198] (-10240.338) * (-10248.519) [-10237.108] (-10256.932) (-10257.008) -- 0:04:50
873000 -- (-10244.883) (-10243.511) (-10243.075) [-10244.894] * (-10247.897) [-10246.668] (-10261.546) (-10252.782) -- 0:04:48
874000 -- [-10244.803] (-10250.763) (-10243.115) (-10254.011) * (-10252.976) [-10244.982] (-10244.505) (-10238.209) -- 0:04:45
875000 -- [-10255.652] (-10262.278) (-10238.680) (-10251.756) * (-10243.932) (-10274.101) [-10244.303] (-10241.794) -- 0:04:43
Average standard deviation of split frequencies: 0.007646
876000 -- [-10246.031] (-10250.310) (-10250.261) (-10244.956) * (-10249.453) (-10239.641) (-10245.391) [-10234.035] -- 0:04:41
877000 -- (-10247.525) (-10256.102) [-10245.948] (-10261.749) * (-10247.648) (-10256.279) (-10243.976) [-10238.143] -- 0:04:38
878000 -- (-10263.890) (-10251.491) (-10236.280) [-10251.859] * [-10233.668] (-10269.701) (-10242.006) (-10257.792) -- 0:04:36
879000 -- (-10248.158) (-10244.734) [-10233.782] (-10248.980) * (-10243.083) [-10259.343] (-10237.164) (-10254.170) -- 0:04:34
880000 -- (-10246.314) (-10251.522) (-10245.631) [-10234.160] * (-10255.077) (-10252.845) (-10242.095) [-10246.941] -- 0:04:31
Average standard deviation of split frequencies: 0.007793
881000 -- [-10246.637] (-10253.942) (-10257.335) (-10261.707) * [-10237.029] (-10253.373) (-10254.336) (-10252.103) -- 0:04:29
882000 -- [-10240.025] (-10258.071) (-10249.760) (-10255.172) * [-10242.601] (-10255.776) (-10232.261) (-10231.474) -- 0:04:27
883000 -- (-10241.336) (-10244.539) (-10254.346) [-10254.882] * [-10242.699] (-10251.654) (-10255.333) (-10242.046) -- 0:04:25
884000 -- (-10247.802) (-10237.364) (-10259.586) [-10249.103] * (-10250.775) (-10246.297) (-10252.618) [-10234.953] -- 0:04:22
885000 -- (-10248.506) [-10239.915] (-10248.991) (-10253.799) * [-10241.662] (-10241.554) (-10250.804) (-10249.878) -- 0:04:20
Average standard deviation of split frequencies: 0.007684
886000 -- (-10255.515) [-10238.588] (-10238.904) (-10252.838) * (-10255.959) (-10244.734) [-10240.555] (-10244.545) -- 0:04:18
887000 -- [-10246.600] (-10248.306) (-10254.498) (-10245.627) * (-10255.719) (-10246.766) [-10235.922] (-10240.084) -- 0:04:16
888000 -- [-10228.585] (-10237.078) (-10255.693) (-10250.152) * (-10246.502) (-10249.526) [-10238.955] (-10255.057) -- 0:04:14
889000 -- (-10244.242) (-10239.705) [-10244.070] (-10236.102) * (-10262.765) (-10246.173) [-10245.063] (-10247.738) -- 0:04:11
890000 -- (-10248.186) (-10244.176) [-10246.659] (-10250.751) * (-10241.797) (-10246.502) [-10240.465] (-10245.383) -- 0:04:09
Average standard deviation of split frequencies: 0.007681
891000 -- [-10233.614] (-10241.482) (-10245.260) (-10243.529) * (-10239.181) (-10242.613) (-10250.675) [-10236.792] -- 0:04:07
892000 -- [-10252.007] (-10242.673) (-10248.594) (-10246.705) * (-10259.398) [-10237.494] (-10242.003) (-10248.759) -- 0:04:04
893000 -- (-10241.193) (-10244.685) (-10249.655) [-10247.602] * (-10237.032) (-10255.207) [-10234.345] (-10244.821) -- 0:04:02
894000 -- (-10241.036) (-10248.369) (-10266.794) [-10236.746] * [-10247.549] (-10245.977) (-10265.781) (-10240.498) -- 0:04:00
895000 -- [-10243.828] (-10238.446) (-10257.692) (-10272.561) * [-10240.324] (-10256.943) (-10250.027) (-10247.203) -- 0:03:58
Average standard deviation of split frequencies: 0.007782
896000 -- (-10258.420) [-10232.663] (-10249.305) (-10266.814) * (-10250.687) (-10267.348) [-10246.038] (-10249.062) -- 0:03:55
897000 -- [-10244.615] (-10238.476) (-10255.465) (-10252.320) * (-10257.823) (-10257.983) (-10243.289) [-10242.404] -- 0:03:53
898000 -- (-10249.943) (-10247.431) [-10241.284] (-10239.272) * (-10265.986) [-10250.655] (-10251.878) (-10246.280) -- 0:03:51
899000 -- [-10235.478] (-10250.526) (-10239.437) (-10246.995) * (-10266.159) [-10239.119] (-10263.450) (-10251.203) -- 0:03:48
900000 -- [-10241.446] (-10259.774) (-10249.831) (-10248.372) * (-10250.553) (-10242.218) [-10241.200] (-10243.628) -- 0:03:46
Average standard deviation of split frequencies: 0.007452
901000 -- [-10244.435] (-10242.075) (-10242.929) (-10233.334) * [-10264.404] (-10247.607) (-10241.859) (-10247.729) -- 0:03:44
902000 -- (-10253.253) [-10243.639] (-10261.658) (-10258.514) * (-10244.791) (-10254.674) [-10236.705] (-10250.828) -- 0:03:42
903000 -- (-10244.340) (-10239.099) (-10248.978) [-10245.893] * (-10251.865) [-10244.557] (-10247.683) (-10251.258) -- 0:03:39
904000 -- (-10246.573) [-10236.641] (-10246.913) (-10238.581) * [-10252.988] (-10243.862) (-10265.507) (-10247.660) -- 0:03:37
905000 -- (-10243.532) (-10249.533) [-10247.282] (-10248.894) * (-10246.164) [-10250.216] (-10260.231) (-10266.941) -- 0:03:35
Average standard deviation of split frequencies: 0.007563
906000 -- [-10234.690] (-10254.918) (-10247.880) (-10259.937) * (-10244.343) [-10247.084] (-10242.700) (-10265.221) -- 0:03:33
907000 -- [-10237.355] (-10240.118) (-10247.478) (-10263.449) * (-10241.882) (-10254.049) [-10243.290] (-10251.416) -- 0:03:30
908000 -- [-10237.576] (-10237.002) (-10245.122) (-10242.053) * (-10248.062) [-10231.434] (-10258.606) (-10234.969) -- 0:03:28
909000 -- [-10244.908] (-10245.018) (-10257.493) (-10241.545) * (-10243.181) (-10241.928) (-10240.424) [-10244.254] -- 0:03:26
910000 -- (-10243.414) [-10240.537] (-10258.382) (-10249.969) * (-10242.077) (-10253.045) (-10244.212) [-10226.835] -- 0:03:24
Average standard deviation of split frequencies: 0.007271
911000 -- (-10232.579) (-10255.888) [-10241.822] (-10242.990) * (-10257.831) (-10248.771) (-10243.759) [-10229.443] -- 0:03:22
912000 -- (-10253.123) [-10249.803] (-10252.354) (-10261.241) * [-10245.292] (-10254.144) (-10247.385) (-10241.307) -- 0:03:19
913000 -- [-10243.492] (-10243.366) (-10253.391) (-10244.053) * [-10233.013] (-10254.935) (-10256.436) (-10252.622) -- 0:03:17
914000 -- (-10239.278) (-10236.471) [-10246.501] (-10243.619) * [-10227.850] (-10260.914) (-10243.864) (-10255.392) -- 0:03:15
915000 -- (-10236.641) [-10229.272] (-10239.908) (-10242.523) * (-10237.213) (-10266.466) (-10259.163) [-10244.915] -- 0:03:13
Average standard deviation of split frequencies: 0.007181
916000 -- (-10250.698) [-10240.980] (-10238.815) (-10257.020) * (-10247.297) [-10228.482] (-10254.362) (-10246.716) -- 0:03:11
917000 -- (-10246.638) [-10238.276] (-10260.819) (-10257.026) * (-10239.771) [-10240.154] (-10239.141) (-10242.865) -- 0:03:08
918000 -- (-10253.670) [-10241.424] (-10238.422) (-10257.642) * (-10240.455) (-10251.925) (-10243.079) [-10251.522] -- 0:03:06
919000 -- [-10254.822] (-10243.096) (-10250.445) (-10256.714) * (-10245.781) (-10242.754) [-10236.540] (-10243.695) -- 0:03:04
920000 -- (-10243.511) [-10237.873] (-10256.593) (-10252.494) * (-10240.892) [-10238.997] (-10258.162) (-10256.533) -- 0:03:02
Average standard deviation of split frequencies: 0.006883
921000 -- (-10242.677) [-10239.214] (-10253.914) (-10251.067) * (-10246.214) (-10249.885) [-10246.974] (-10254.682) -- 0:02:59
922000 -- (-10262.205) (-10253.668) (-10243.983) [-10239.022] * (-10237.380) (-10255.046) (-10244.749) [-10241.546] -- 0:02:57
923000 -- (-10255.281) (-10240.239) [-10241.355] (-10251.132) * [-10232.874] (-10258.996) (-10247.673) (-10233.299) -- 0:02:55
924000 -- (-10250.563) (-10237.038) (-10252.986) [-10242.874] * (-10234.734) (-10250.320) [-10241.917] (-10244.912) -- 0:02:53
925000 -- (-10253.518) [-10232.149] (-10240.983) (-10250.746) * [-10251.564] (-10238.203) (-10245.387) (-10258.843) -- 0:02:50
Average standard deviation of split frequencies: 0.006677
926000 -- (-10251.011) (-10253.354) (-10256.295) [-10240.858] * (-10248.223) [-10234.924] (-10230.575) (-10264.605) -- 0:02:48
927000 -- [-10241.229] (-10241.894) (-10244.841) (-10242.571) * (-10264.133) (-10243.026) [-10231.183] (-10241.969) -- 0:02:46
928000 -- (-10245.315) [-10261.579] (-10246.943) (-10244.582) * (-10250.777) (-10243.978) [-10238.961] (-10244.786) -- 0:02:43
929000 -- (-10244.920) (-10254.276) (-10243.821) [-10236.203] * (-10243.285) (-10238.983) [-10235.609] (-10248.203) -- 0:02:41
930000 -- (-10248.069) (-10260.485) [-10246.814] (-10245.933) * (-10245.352) (-10254.395) [-10243.173] (-10243.987) -- 0:02:39
Average standard deviation of split frequencies: 0.006621
931000 -- (-10241.137) (-10250.550) (-10250.036) [-10239.264] * (-10243.109) (-10247.537) [-10230.883] (-10240.286) -- 0:02:37
932000 -- [-10244.628] (-10251.162) (-10247.319) (-10244.645) * (-10264.106) (-10255.834) [-10249.146] (-10250.730) -- 0:02:34
933000 -- (-10254.157) [-10233.462] (-10245.368) (-10234.895) * (-10260.411) (-10253.624) [-10245.193] (-10239.114) -- 0:02:32
934000 -- [-10245.520] (-10245.521) (-10232.471) (-10252.966) * [-10252.570] (-10253.882) (-10254.482) (-10250.808) -- 0:02:30
935000 -- (-10251.931) (-10253.222) [-10243.182] (-10246.597) * [-10237.090] (-10248.486) (-10246.341) (-10248.744) -- 0:02:27
Average standard deviation of split frequencies: 0.006667
936000 -- [-10228.426] (-10250.768) (-10261.518) (-10245.851) * [-10231.760] (-10241.878) (-10242.624) (-10238.734) -- 0:02:25
937000 -- (-10246.999) (-10251.264) (-10253.091) [-10244.571] * (-10238.835) (-10240.008) (-10243.386) [-10242.693] -- 0:02:23
938000 -- [-10234.664] (-10243.610) (-10258.205) (-10246.647) * (-10254.403) [-10237.278] (-10262.076) (-10241.318) -- 0:02:20
939000 -- (-10243.511) (-10255.529) (-10254.765) [-10246.692] * (-10246.359) [-10240.465] (-10235.540) (-10243.612) -- 0:02:18
940000 -- (-10260.313) [-10234.329] (-10247.601) (-10257.490) * [-10244.782] (-10255.733) (-10250.687) (-10256.716) -- 0:02:16
Average standard deviation of split frequencies: 0.006600
941000 -- (-10256.158) (-10251.089) (-10231.821) [-10260.098] * [-10248.454] (-10254.112) (-10249.240) (-10242.112) -- 0:02:14
942000 -- (-10232.406) [-10240.870] (-10242.734) (-10259.010) * [-10245.487] (-10241.995) (-10249.985) (-10247.258) -- 0:02:11
943000 -- [-10229.391] (-10237.753) (-10273.416) (-10251.022) * [-10242.352] (-10244.549) (-10239.331) (-10248.902) -- 0:02:09
944000 -- (-10242.031) (-10259.540) (-10253.470) [-10241.375] * (-10247.840) (-10252.172) (-10236.761) [-10240.065] -- 0:02:07
945000 -- (-10263.621) (-10256.414) (-10263.019) [-10241.993] * [-10240.068] (-10267.240) (-10247.026) (-10240.837) -- 0:02:05
Average standard deviation of split frequencies: 0.006692
946000 -- (-10252.908) (-10247.963) (-10245.408) [-10232.322] * (-10246.669) (-10259.299) [-10242.583] (-10249.533) -- 0:02:02
947000 -- [-10239.347] (-10239.696) (-10244.713) (-10256.017) * (-10259.654) (-10248.813) [-10241.204] (-10260.307) -- 0:02:00
948000 -- (-10250.436) [-10241.517] (-10244.351) (-10241.140) * [-10243.246] (-10242.713) (-10244.145) (-10244.528) -- 0:01:58
949000 -- (-10265.588) (-10257.956) [-10240.931] (-10234.863) * (-10240.153) (-10254.815) (-10250.288) [-10244.280] -- 0:01:55
950000 -- [-10247.532] (-10267.200) (-10234.184) (-10255.174) * [-10242.170] (-10250.699) (-10241.803) (-10237.975) -- 0:01:53
Average standard deviation of split frequencies: 0.006576
951000 -- (-10265.865) (-10243.869) [-10232.763] (-10239.915) * (-10249.520) (-10246.297) (-10261.218) [-10241.193] -- 0:01:51
952000 -- (-10242.849) (-10261.610) [-10252.521] (-10252.324) * (-10249.732) (-10274.174) [-10251.691] (-10236.582) -- 0:01:49
953000 -- [-10246.765] (-10247.412) (-10251.733) (-10238.676) * (-10251.199) (-10254.477) [-10236.891] (-10239.130) -- 0:01:46
954000 -- [-10245.430] (-10242.712) (-10251.058) (-10245.374) * [-10234.923] (-10248.219) (-10235.655) (-10253.393) -- 0:01:44
955000 -- [-10253.150] (-10266.718) (-10248.451) (-10236.704) * (-10246.448) (-10252.861) [-10246.555] (-10251.833) -- 0:01:42
Average standard deviation of split frequencies: 0.006563
956000 -- [-10234.137] (-10236.712) (-10254.617) (-10248.664) * (-10267.281) [-10242.782] (-10257.837) (-10239.383) -- 0:01:39
957000 -- (-10255.437) [-10235.194] (-10251.677) (-10237.454) * (-10245.680) (-10234.828) (-10264.173) [-10247.093] -- 0:01:37
958000 -- (-10252.657) [-10234.909] (-10234.408) (-10253.064) * [-10238.779] (-10233.098) (-10255.023) (-10251.719) -- 0:01:35
959000 -- (-10257.523) [-10244.843] (-10248.437) (-10242.107) * (-10241.068) [-10237.157] (-10253.254) (-10241.598) -- 0:01:33
960000 -- (-10242.365) [-10249.124] (-10261.471) (-10249.609) * (-10243.940) (-10239.884) (-10267.042) [-10230.438] -- 0:01:30
Average standard deviation of split frequencies: 0.006321
961000 -- (-10270.388) [-10230.690] (-10262.460) (-10243.102) * (-10241.329) (-10246.858) (-10244.735) [-10233.304] -- 0:01:28
962000 -- (-10257.655) (-10256.592) (-10248.395) [-10241.231] * (-10271.926) (-10256.030) [-10244.531] (-10243.191) -- 0:01:26
963000 -- (-10260.462) (-10263.166) (-10255.823) [-10238.529] * (-10249.139) [-10242.480] (-10239.869) (-10247.338) -- 0:01:23
964000 -- [-10243.469] (-10249.362) (-10245.289) (-10254.716) * (-10234.210) (-10240.802) (-10256.119) [-10237.603] -- 0:01:21
965000 -- (-10257.629) (-10241.315) [-10258.351] (-10255.961) * (-10250.812) (-10248.542) [-10234.831] (-10235.989) -- 0:01:19
Average standard deviation of split frequencies: 0.006140
966000 -- (-10264.739) (-10253.962) (-10251.431) [-10236.038] * (-10258.788) [-10241.176] (-10247.751) (-10241.620) -- 0:01:17
967000 -- (-10256.850) (-10247.871) (-10245.003) [-10245.010] * [-10241.682] (-10256.630) (-10247.950) (-10247.713) -- 0:01:14
968000 -- (-10251.484) (-10244.880) [-10240.139] (-10244.988) * [-10243.089] (-10249.301) (-10238.517) (-10245.790) -- 0:01:12
969000 -- (-10253.805) [-10243.511] (-10237.780) (-10257.957) * (-10238.753) (-10253.726) [-10244.014] (-10233.116) -- 0:01:10
970000 -- (-10259.990) [-10242.019] (-10242.252) (-10256.519) * (-10239.754) [-10245.231] (-10247.991) (-10256.460) -- 0:01:08
Average standard deviation of split frequencies: 0.006302
971000 -- (-10267.648) (-10245.718) [-10236.013] (-10247.306) * (-10238.174) (-10254.402) (-10248.300) [-10252.530] -- 0:01:05
972000 -- (-10252.883) (-10259.913) (-10246.089) [-10243.675] * [-10241.581] (-10252.114) (-10241.544) (-10253.264) -- 0:01:03
973000 -- [-10246.057] (-10244.257) (-10251.117) (-10249.668) * (-10239.403) (-10246.771) [-10242.386] (-10267.232) -- 0:01:01
974000 -- (-10250.244) (-10253.334) (-10235.004) [-10249.436] * [-10236.681] (-10255.609) (-10272.947) (-10235.192) -- 0:00:58
975000 -- (-10259.120) (-10235.751) [-10234.114] (-10262.524) * (-10244.661) (-10258.971) (-10264.680) [-10241.715] -- 0:00:56
Average standard deviation of split frequencies: 0.006324
976000 -- (-10268.954) (-10250.149) [-10252.652] (-10235.363) * (-10249.423) (-10256.768) (-10252.836) [-10242.829] -- 0:00:54
977000 -- (-10264.487) (-10237.496) [-10232.622] (-10250.507) * (-10247.427) (-10248.223) (-10251.112) [-10251.170] -- 0:00:52
978000 -- (-10259.480) [-10256.032] (-10248.730) (-10251.811) * (-10242.641) [-10233.568] (-10247.138) (-10248.586) -- 0:00:49
979000 -- (-10257.510) (-10267.395) [-10243.055] (-10244.865) * (-10265.081) (-10254.499) (-10259.189) [-10246.396] -- 0:00:47
980000 -- (-10245.276) [-10242.428] (-10247.752) (-10249.597) * (-10236.778) [-10235.596] (-10249.371) (-10240.214) -- 0:00:45
Average standard deviation of split frequencies: 0.006386
981000 -- (-10246.906) [-10243.501] (-10252.054) (-10255.920) * (-10239.819) (-10251.844) [-10249.841] (-10262.705) -- 0:00:43
982000 -- [-10244.761] (-10241.459) (-10245.489) (-10259.640) * (-10248.773) (-10239.516) [-10236.987] (-10264.254) -- 0:00:40
983000 -- (-10262.430) (-10247.200) (-10245.806) [-10236.384] * [-10237.866] (-10242.855) (-10249.640) (-10243.452) -- 0:00:38
984000 -- (-10252.717) [-10244.076] (-10244.401) (-10247.795) * [-10232.053] (-10258.509) (-10253.222) (-10243.196) -- 0:00:36
985000 -- (-10248.016) (-10241.243) [-10229.455] (-10244.298) * (-10246.919) (-10243.208) [-10241.221] (-10258.334) -- 0:00:33
Average standard deviation of split frequencies: 0.006238
986000 -- (-10249.314) (-10248.964) (-10237.374) [-10242.000] * (-10250.816) (-10252.902) [-10236.378] (-10249.717) -- 0:00:31
987000 -- (-10246.694) (-10240.181) [-10234.681] (-10246.200) * (-10243.869) (-10249.074) [-10240.735] (-10248.811) -- 0:00:29
988000 -- (-10253.051) (-10239.871) [-10238.046] (-10247.465) * (-10250.889) [-10244.715] (-10247.835) (-10253.429) -- 0:00:27
989000 -- (-10239.286) [-10234.154] (-10237.785) (-10269.485) * [-10240.436] (-10243.228) (-10237.249) (-10251.773) -- 0:00:24
990000 -- [-10255.171] (-10232.246) (-10239.810) (-10267.852) * [-10238.932] (-10255.682) (-10244.766) (-10263.530) -- 0:00:22
Average standard deviation of split frequencies: 0.005998
991000 -- [-10238.877] (-10260.448) (-10230.926) (-10253.249) * (-10238.184) (-10245.660) (-10247.616) [-10244.900] -- 0:00:20
992000 -- [-10241.443] (-10243.705) (-10239.344) (-10244.137) * [-10238.576] (-10247.264) (-10238.099) (-10243.903) -- 0:00:18
993000 -- (-10262.413) (-10245.036) (-10251.026) [-10252.554] * (-10241.261) (-10271.170) (-10259.724) [-10236.236] -- 0:00:15
994000 -- (-10252.475) (-10242.248) (-10238.702) [-10251.142] * [-10236.214] (-10258.670) (-10251.773) (-10246.303) -- 0:00:13
995000 -- (-10247.968) [-10239.890] (-10257.055) (-10266.282) * (-10242.981) (-10245.753) (-10251.381) [-10235.363] -- 0:00:11
Average standard deviation of split frequencies: 0.005927
996000 -- (-10258.225) [-10235.156] (-10244.374) (-10242.246) * (-10253.166) (-10261.819) (-10251.676) [-10244.561] -- 0:00:09
997000 -- (-10257.296) (-10239.285) [-10239.301] (-10243.405) * (-10249.806) [-10247.805] (-10262.439) (-10241.401) -- 0:00:06
998000 -- (-10242.110) (-10239.297) [-10234.741] (-10238.797) * (-10235.989) [-10232.760] (-10247.796) (-10246.770) -- 0:00:04
999000 -- [-10242.485] (-10247.214) (-10234.071) (-10255.130) * (-10247.797) (-10244.268) (-10264.487) [-10231.703] -- 0:00:02
1000000 -- (-10248.705) (-10257.522) [-10244.122] (-10250.251) * [-10243.182] (-10241.588) (-10246.559) (-10246.912) -- 0:00:00
Average standard deviation of split frequencies: 0.005933
Analysis completed in 37 mins 43 seconds
Analysis used 2260.88 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -10217.65
Likelihood of best state for "cold" chain of run 2 was -10219.92
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
28.1 % ( 25 %) Dirichlet(Revmat{all})
47.1 % ( 35 %) Slider(Revmat{all})
8.6 % ( 14 %) Dirichlet(Pi{all})
22.0 % ( 26 %) Slider(Pi{all})
44.9 % ( 29 %) Multiplier(Alpha{1,2})
47.3 % ( 28 %) Multiplier(Alpha{3})
46.0 % ( 24 %) Slider(Pinvar{all})
36.0 % ( 35 %) ExtSPR(Tau{all},V{all})
24.4 % ( 16 %) ExtTBR(Tau{all},V{all})
35.5 % ( 37 %) NNI(Tau{all},V{all})
35.0 % ( 33 %) ParsSPR(Tau{all},V{all})
26.6 % ( 23 %) Multiplier(V{all})
42.7 % ( 43 %) Nodeslider(V{all})
24.1 % ( 20 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
29.4 % ( 26 %) Dirichlet(Revmat{all})
46.0 % ( 33 %) Slider(Revmat{all})
9.2 % ( 14 %) Dirichlet(Pi{all})
21.4 % ( 19 %) Slider(Pi{all})
45.0 % ( 27 %) Multiplier(Alpha{1,2})
47.7 % ( 22 %) Multiplier(Alpha{3})
45.1 % ( 28 %) Slider(Pinvar{all})
36.1 % ( 36 %) ExtSPR(Tau{all},V{all})
24.4 % ( 24 %) ExtTBR(Tau{all},V{all})
36.2 % ( 30 %) NNI(Tau{all},V{all})
35.0 % ( 38 %) ParsSPR(Tau{all},V{all})
26.5 % ( 35 %) Multiplier(V{all})
42.9 % ( 35 %) Nodeslider(V{all})
24.5 % ( 22 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.62 0.34 0.17
2 | 167373 0.65 0.38
3 | 166150 165693 0.67
4 | 167350 166282 167152
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.63 0.36 0.18
2 | 166510 0.66 0.39
3 | 166815 166469 0.68
4 | 167276 166425 166505
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -10237.59
| 1 1 |
| 1 2 |
| 2 1 1 |
| 1 1 21 1 2 2 |
|1 1 1 1 2 1 2 2 21 1 2 2 |
| 2 1 2 11 2 2 2 22 2 1 * 2 *|
| 21 2 2 2 2 1 1 1 2 |
| * 2 1 1 2 11 2 11 1 2 * 1 |
|2 1 1 2 2 12 2 1 1 2 2 21 1 2 |
| 2 1 2 2 1 2 2 1 2 11 1 |
| 12 1 1 2 |
| 2 2 1 1 21 2 |
| 2 22 1 1 |
| 2 1 |
| 2 1 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -10245.42
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -10230.04 -10264.37
2 -10230.06 -10258.41
--------------------------------------
TOTAL -10230.05 -10263.68
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.118643 0.000047 0.104942 0.131673 0.118511 1279.32 1357.44 1.001
r(A<->C){all} 0.076314 0.000189 0.050922 0.103996 0.075602 948.91 998.37 1.001
r(A<->G){all} 0.222771 0.000474 0.183554 0.268110 0.221507 838.04 858.09 1.000
r(A<->T){all} 0.023826 0.000037 0.013240 0.036373 0.023271 999.50 1040.33 1.000
r(C<->G){all} 0.011610 0.000037 0.001383 0.022895 0.010618 705.95 712.37 1.000
r(C<->T){all} 0.576935 0.000633 0.527310 0.624378 0.577893 886.11 908.48 1.001
r(G<->T){all} 0.088544 0.000130 0.065747 0.110589 0.088096 984.99 1042.93 1.000
pi(A){all} 0.245752 0.000038 0.233702 0.257669 0.245550 690.01 869.77 1.000
pi(C){all} 0.172734 0.000027 0.162896 0.183139 0.172551 1053.81 1105.18 1.000
pi(G){all} 0.230572 0.000037 0.219431 0.243365 0.230578 846.88 916.09 1.000
pi(T){all} 0.350942 0.000046 0.337638 0.364155 0.350899 851.31 977.12 1.000
alpha{1,2} 0.474109 0.055085 0.131803 0.985916 0.429355 860.13 992.73 1.000
alpha{3} 1.671603 0.905650 0.343346 3.569141 1.450952 691.23 709.12 1.000
pinvar{all} 0.576425 0.006802 0.407885 0.716311 0.592711 566.36 684.03 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C321
2 -- C66
3 -- C208
4 -- C242
5 -- C327
6 -- C72
7 -- C492
8 -- C225
9 -- C78
10 -- C290
11 -- C197
12 -- C604
13 -- C316
14 -- C544
15 -- C556
16 -- C370
17 -- C76
18 -- C112
19 -- C58
20 -- C596
21 -- C147
22 -- C580
23 -- C433
24 -- C592
25 -- C388
26 -- C130
27 -- C312
28 -- C218
29 -- C136
30 -- C456
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------------------------
1 -- .*****************************
2 -- .*............................
3 -- ..*...........................
4 -- ...*..........................
5 -- ....*.........................
6 -- .....*........................
7 -- ......*.......................
8 -- .......*......................
9 -- ........*.....................
10 -- .........*....................
11 -- ..........*...................
12 -- ...........*..................
13 -- ............*.................
14 -- .............*................
15 -- ..............*...............
16 -- ...............*..............
17 -- ................*.............
18 -- .................*............
19 -- ..................*...........
20 -- ...................*..........
21 -- ....................*.........
22 -- .....................*........
23 -- ......................*.......
24 -- .......................*......
25 -- ........................*.....
26 -- .........................*....
27 -- ..........................*...
28 -- ...........................*..
29 -- ............................*.
30 -- .............................*
31 -- ...*..**.***.**....*.*.**.....
32 -- ...*..**.***.***.*.*.*.**.....
33 -- ......*.......*....*....*.....
34 -- ..*...............*..........*
35 -- ...............*.*............
36 -- .***.*******.*************.***
37 -- ..*..........................*
38 -- ..*.....*.........*.*........*
39 -- ..*.....*.........*..........*
40 -- .***..******.***.*****.***..**
41 -- .....*................*.......
42 -- .***..******.***.*****.***.***
43 -- ...*...*.***.*.......*.*......
44 -- .......*.***.*.......*.*......
45 -- ......*............*....*.....
46 -- ..**..******.***.*****.**....*
47 -- .***..******.*********.***.***
48 -- .*.......................*....
49 -- .*.......................*..*.
50 -- ..**..******.***.*****.**...**
51 -- ......*............*..........
52 -- ......*.................*.....
53 -- ...................*....*.....
54 -- .***.*******.***.*********.***
55 -- .***********.*****************
56 -- ....*.....................*...
57 -- .***.*************************
58 -- .***********.*************.***
59 -- .***.*********************.***
60 -- .*************************.***
61 -- ....*.......*.................
62 -- .***.*******.*****************
63 -- ............*.............*...
64 -- ....*.......*.............*...
65 -- .........................*..*.
66 -- .**.....*.........*.*....*..**
67 -- .***..******.***.*****.**...**
68 -- .........**...................
69 -- .........*.*..................
70 -- .......*.***.*.........*......
71 -- .........***.*.......*.*......
72 -- .............*.......*........
------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 3002 1.000000 0.000000 1.000000 1.000000 2
33 3002 1.000000 0.000000 1.000000 1.000000 2
34 3002 1.000000 0.000000 1.000000 1.000000 2
35 3002 1.000000 0.000000 1.000000 1.000000 2
36 3002 1.000000 0.000000 1.000000 1.000000 2
37 3002 1.000000 0.000000 1.000000 1.000000 2
38 3002 1.000000 0.000000 1.000000 1.000000 2
39 3002 1.000000 0.000000 1.000000 1.000000 2
40 3001 0.999667 0.000471 0.999334 1.000000 2
41 3001 0.999667 0.000471 0.999334 1.000000 2
42 2983 0.993671 0.002355 0.992005 0.995336 2
43 2964 0.987342 0.003769 0.984677 0.990007 2
44 2856 0.951366 0.008480 0.945370 0.957362 2
45 2582 0.860093 0.009422 0.853431 0.866755 2
46 2401 0.799800 0.018373 0.786809 0.812791 2
47 2223 0.740506 0.000471 0.740173 0.740839 2
48 1796 0.598268 0.009422 0.591606 0.604930 2
49 1105 0.368088 0.023083 0.351765 0.384410 2
50 1090 0.363091 0.011306 0.355097 0.371086 2
51 960 0.319787 0.001884 0.318454 0.321119 2
52 940 0.313125 0.009422 0.306462 0.319787 2
53 910 0.303131 0.001884 0.301799 0.304464 2
54 673 0.224184 0.000471 0.223851 0.224517 2
55 632 0.210526 0.013191 0.201199 0.219853 2
56 622 0.207195 0.009422 0.200533 0.213857 2
57 615 0.204863 0.004240 0.201865 0.207861 2
58 614 0.204530 0.007537 0.199201 0.209860 2
59 612 0.203864 0.006595 0.199201 0.208528 2
60 597 0.198867 0.011777 0.190540 0.207195 2
61 583 0.194204 0.007066 0.189207 0.199201 2
62 579 0.192871 0.009893 0.185876 0.199867 2
63 578 0.192538 0.002827 0.190540 0.194537 2
64 572 0.190540 0.000942 0.189873 0.191206 2
65 447 0.148901 0.007066 0.143904 0.153897 2
66 325 0.108261 0.008951 0.101932 0.114590 2
67 319 0.106262 0.008009 0.100600 0.111925 2
68 294 0.097935 0.009422 0.091272 0.104597 2
69 293 0.097602 0.007066 0.092605 0.102598 2
70 292 0.097268 0.006595 0.092605 0.101932 2
71 286 0.095270 0.012248 0.086609 0.103931 2
72 276 0.091939 0.015075 0.081279 0.102598 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.002959 0.000001 0.001543 0.004436 0.002893 1.001 2
length{all}[2] 0.005005 0.000001 0.003186 0.007054 0.004938 1.000 2
length{all}[3] 0.000439 0.000000 0.000002 0.001085 0.000365 1.001 2
length{all}[4] 0.002141 0.000000 0.000917 0.003373 0.002081 1.000 2
length{all}[5] 0.003552 0.000001 0.001983 0.005259 0.003483 1.000 2
length{all}[6] 0.005491 0.000001 0.003346 0.007653 0.005404 1.000 2
length{all}[7] 0.001573 0.000000 0.000526 0.002682 0.001510 1.000 2
length{all}[8] 0.000192 0.000000 0.000000 0.000578 0.000136 1.000 2
length{all}[9] 0.016241 0.000004 0.012520 0.020351 0.016136 1.000 2
length{all}[10] 0.001793 0.000000 0.000740 0.003015 0.001730 1.000 2
length{all}[11] 0.000392 0.000000 0.000012 0.000936 0.000329 1.000 2
length{all}[12] 0.000790 0.000000 0.000138 0.001586 0.000728 1.000 2
length{all}[13] 0.000592 0.000000 0.000082 0.001259 0.000530 1.001 2
length{all}[14] 0.000196 0.000000 0.000000 0.000592 0.000135 1.000 2
length{all}[15] 0.000811 0.000000 0.000142 0.001627 0.000743 1.001 2
length{all}[16] 0.003841 0.000001 0.002128 0.005629 0.003777 1.000 2
length{all}[17] 0.002042 0.000000 0.000857 0.003370 0.001989 1.000 2
length{all}[18] 0.001578 0.000000 0.000569 0.002676 0.001516 1.000 2
length{all}[19] 0.007128 0.000002 0.004658 0.009903 0.007046 1.001 2
length{all}[20] 0.001180 0.000000 0.000333 0.002168 0.001102 1.000 2
length{all}[21] 0.004789 0.000001 0.002796 0.006868 0.004710 1.000 2
length{all}[22] 0.000195 0.000000 0.000000 0.000571 0.000142 1.000 2
length{all}[23] 0.004580 0.000001 0.002669 0.006508 0.004476 1.000 2
length{all}[24] 0.000193 0.000000 0.000000 0.000567 0.000132 1.000 2
length{all}[25] 0.000600 0.000000 0.000076 0.001276 0.000530 1.000 2
length{all}[26] 0.002358 0.000000 0.001056 0.003660 0.002286 1.000 2
length{all}[27] 0.000378 0.000000 0.000002 0.000882 0.000319 1.000 2
length{all}[28] 0.003292 0.000001 0.001811 0.004993 0.003223 1.000 2
length{all}[29] 0.004053 0.000001 0.002467 0.005921 0.003958 1.000 2
length{all}[30] 0.000753 0.000000 0.000090 0.001545 0.000679 1.000 2
length{all}[31] 0.002358 0.000001 0.001031 0.003752 0.002294 1.000 2
length{all}[32] 0.003347 0.000001 0.001790 0.005084 0.003274 1.000 2
length{all}[33] 0.002746 0.000001 0.001361 0.004358 0.002683 1.000 2
length{all}[34] 0.003751 0.000001 0.002017 0.005860 0.003654 1.001 2
length{all}[35] 0.001281 0.000000 0.000335 0.002369 0.001206 1.000 2
length{all}[36] 0.003334 0.000001 0.001918 0.005067 0.003262 1.004 2
length{all}[37] 0.008723 0.000002 0.006094 0.011620 0.008601 1.000 2
length{all}[38] 0.002304 0.000001 0.001101 0.003837 0.002245 1.001 2
length{all}[39] 0.003575 0.000001 0.001739 0.005487 0.003496 1.001 2
length{all}[40] 0.001150 0.000000 0.000284 0.002186 0.001065 1.000 2
length{all}[41] 0.001018 0.000000 0.000187 0.001942 0.000950 1.000 2
length{all}[42] 0.001248 0.000000 0.000368 0.002295 0.001183 1.000 2
length{all}[43] 0.000628 0.000000 0.000057 0.001366 0.000563 1.000 2
length{all}[44] 0.000410 0.000000 0.000002 0.000974 0.000343 1.000 2
length{all}[45] 0.000389 0.000000 0.000003 0.000911 0.000322 1.000 2
length{all}[46] 0.000599 0.000000 0.000002 0.001374 0.000520 1.000 2
length{all}[47] 0.000515 0.000000 0.000004 0.001266 0.000422 1.000 2
length{all}[48] 0.000365 0.000000 0.000001 0.000897 0.000290 1.000 2
length{all}[49] 0.000343 0.000000 0.000001 0.000923 0.000267 0.999 2
length{all}[50] 0.000423 0.000000 0.000000 0.001045 0.000365 1.000 2
length{all}[51] 0.000193 0.000000 0.000000 0.000577 0.000132 0.999 2
length{all}[52] 0.000207 0.000000 0.000000 0.000600 0.000142 0.999 2
length{all}[53] 0.000198 0.000000 0.000000 0.000586 0.000142 0.999 2
length{all}[54] 0.000366 0.000000 0.000007 0.000851 0.000306 1.000 2
length{all}[55] 0.000201 0.000000 0.000000 0.000615 0.000138 1.003 2
length{all}[56] 0.000196 0.000000 0.000000 0.000626 0.000138 1.001 2
length{all}[57] 0.000195 0.000000 0.000000 0.000607 0.000136 0.999 2
length{all}[58] 0.000199 0.000000 0.000000 0.000572 0.000146 1.002 2
length{all}[59] 0.000205 0.000000 0.000000 0.000636 0.000145 0.998 2
length{all}[60] 0.000223 0.000000 0.000000 0.000696 0.000156 1.000 2
length{all}[61] 0.000199 0.000000 0.000001 0.000582 0.000132 1.003 2
length{all}[62] 0.000200 0.000000 0.000000 0.000571 0.000142 0.999 2
length{all}[63] 0.000201 0.000000 0.000000 0.000607 0.000142 0.998 2
length{all}[64] 0.000193 0.000000 0.000000 0.000590 0.000138 1.016 2
length{all}[65] 0.000373 0.000000 0.000003 0.000975 0.000306 1.000 2
length{all}[66] 0.000480 0.000000 0.000002 0.001148 0.000417 0.997 2
length{all}[67] 0.000252 0.000000 0.000002 0.000714 0.000175 1.002 2
length{all}[68] 0.000206 0.000000 0.000003 0.000586 0.000151 0.999 2
length{all}[69] 0.000197 0.000000 0.000000 0.000645 0.000135 0.997 2
length{all}[70] 0.000211 0.000000 0.000001 0.000625 0.000159 1.008 2
length{all}[71] 0.000196 0.000000 0.000001 0.000534 0.000149 0.997 2
length{all}[72] 0.000205 0.000000 0.000001 0.000648 0.000155 0.998 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.005933
Maximum standard deviation of split frequencies = 0.023083
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.016
Clade credibility values:
/--------------------------------------------------------------------- C321 (1)
|
|--------------------------------------------------------------------- C327 (5)
|
|--------------------------------------------------------------------- C316 (13)
|
|--------------------------------------------------------------------- C312 (27)
|
| /------- C66 (2)
| /----------------60---------------+
| | \------- C130 (26)
| |
| | /------- C208 (3)
| | /--100-+
| | | \------- C456 (30)
| | /--100-+
| | | \-------------- C58 (19)
| | /--100-+
| | | \--------------------- C78 (9)
| | /-100-+
| | | \---------------------------- C147 (21)
| | |
| | | /-------------- C242 (4)
| | | |
| | | | /------- C225 (8)
| | | | |
| | | /--99--+ |------- C290 (10)
+ | | | | |
| | | | | |------- C197 (11)
| | | | | |
| /--100-+--80--+ | \--95--+------- C604 (12)
| | | | | |
| | | | | |------- C544 (14)
| | | | | |
| | | | /--100-+ |------- C580 (22)
| | | | | | |
| | | | | | \------- C592 (24)
| | | | | |
| | | | | | /------- C492 (7)
| | | | | | |
| | | | | | /--86--+------- C596 (20)
| /--99--+ | \-100-+ | | |
| | | | | \--100-+ \------- C388 (25)
| | | | | |
| | | | | \-------------- C556 (15)
| | | | |
| | | | | /------- C370 (16)
| | | | \---------100--------+
| /--74--+ | | \------- C112 (18)
| | | | |
| | | | \----------------------------------------- C136 (29)
| | | |
| | | \------------------------------------------------ C218 (28)
\--100-+ |
| \------------------------------------------------------- C76 (17)
|
| /------- C72 (6)
\--------------------------100-------------------------+
\------- C433 (23)
Phylogram (based on average branch lengths):
/------- C321 (1)
|
|--------- C327 (5)
|
|- C316 (13)
|
|- C312 (27)
|
| /------------ C66 (2)
| /+
| |\----- C130 (26)
| |
| | /- C208 (3)
| | /--------------------+
| | | \-- C456 (30)
| | /--------+
| | | \----------------- C58 (19)
| | /--------+
| | | \---------------------------------------- C78 (9)
| |/-----+
| || \------------ C147 (21)
| ||
| || /----- C242 (4)
| || |
| || |- C225 (8)
| || |
| || /-+----- C290 (10)
+ || | |
| || | |- C197 (11)
| || | |
| /--++ | |-- C604 (12)
| | || | |
| | || | |- C544 (14)
| | || | |
| | || /-----+ |- C580 (22)
| | || | | |
| | || | | \- C592 (24)
| | || | |
| | || | | /--- C492 (7)
| | || | | |
| | || | | /+-- C596 (20)
| /--+ |\-------+ | ||
| | | | | \------+\- C388 (25)
| | | | | |
| | | | | \-- C556 (15)
| | | | |
| | | | | /---------- C370 (16)
| | | | \--+
| /+ | | \---- C112 (18)
| || | |
| || | \---------- C136 (29)
| || |
| || \-------- C218 (28)
\-------+|
|\----- C76 (17)
|
| /------------- C72 (6)
\--+
\----------- C433 (23)
|-----------| 0.005 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3001 trees sampled):
50 % credible set contains 1500 trees
90 % credible set contains 2701 trees
95 % credible set contains 2851 trees
99 % credible set contains 2971 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Thu Nov 17 16:36:59 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_nsp1_VIPR_ALG4_672096717_2978_7843_1_2012_02_China_Unknown_PEDV.result--
-- Starting log on Fri Nov 18 06:37:20 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/LZW_nsp1_VIPR_ALG4_672096717_2978_7843_1_2012_02_China_Unknown_PEDV.result/original_alignment/codeml,LZW_nsp1_VIPR_ALG4_672096717_2978_7843_1_2012_02_China_Unknown_PEDV.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C544 4866 sites
reading seq# 2 C370 4866 sites
reading seq# 3 C556 4866 sites
reading seq# 4 C197 4866 sites
reading seq# 5 C112 4866 sites
reading seq# 6 C76 4866 sites
reading seq# 7 C58 4866 sites
reading seq# 8 C316 4866 sites
reading seq# 9 C218 4866 sites
reading seq#10 C596 4866 sites
reading seq#11 C66 4866 sites
reading seq#12 C321 4866 sites
reading seq#13 C208 4866 sites
reading seq#14 C147 4866 sites
reading seq#15 C580 4866 sites
reading seq#16 C327 4866 sites
reading seq#17 C242 4866 sites
reading seq#18 C72 4866 sites
reading seq#19 C592 4866 sites
reading seq#20 C433 4866 sites
reading seq#21 C225 4866 sites
reading seq#22 C492 4866 sites
reading seq#23 C130 4866 sites
reading seq#24 C312 4866 sites
reading seq#25 C388 4866 sites
reading seq#26 C290 4866 sites
reading seq#27 C78 4866 sites
reading seq#28 C456 4866 sites
reading seq#29 C136 4866 sites
reading seq#30 C604 4866 sitesns = 30 ls = 4866
Reading sequences, sequential format..
Reading seq # 1: C544
Reading seq # 2: C370
Reading seq # 3: C556
Reading seq # 4: C197
Reading seq # 5: C112
Reading seq # 6: C76
Reading seq # 7: C58
Reading seq # 8: C316
Reading seq # 9: C218
Reading seq #10: C596
Reading seq #11: C66
Reading seq #12: C321
Reading seq #13: C208
Reading seq #14: C147
Reading seq #15: C580
Reading seq #16: C327
Reading seq #17: C242
Reading seq #18: C72
Reading seq #19: C592
Reading seq #20: C433
Reading seq #21: C225
Reading seq #22: C492
Reading seq #23: C130
Reading seq #24: C312
Reading seq #25: C388
Reading seq #26: C290
Reading seq #27: C78
Reading seq #28: C456
Reading seq #29: C136
Reading seq #30: C604
Sites with gaps or missing data are removed.
21 ambiguity characters in seq. 2
24 ambiguity characters in seq. 13
24 ambiguity characters in seq. 28
15 sites are removed. 116 117 118 119 120 121 122 141 142 143 144 145 146 147 148
Sequences read..
Counting site patterns.. 0:00
Compressing, 407 patterns at 1607 / 1607 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 407 patterns at 1607 / 1607 sites (100.0%), 0:00
Counting codons..
3480 bytes for distance
397232 bytes for conP
35816 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(12, 16, 8, 24, (((((11, 23), (((((13, 28), 7), 27), 14), (((17, (21, 26, 4, 30, 1, 15, 19)), ((22, 10, 25), 3)), (2, 5))), 29), 9), 6), (18, 20))); MP score: 513
3773704 bytes for conP, adjusted
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
37
0.076411 0.027689 0.064851 0.024980 0.059449 0.074340 0.091685 0.101234 0.041292 0.089497 0.105606 0.102110 0.036605 0.016679 0.041122 0.061608 0.090797 0.084126 0.032400 0.085202 0.044877 0.062461 0.025738 0.104525 0.024835 0.022251 0.047009 0.078040 0.035207 0.027410 0.091285 0.011157 0.011543 0.075379 0.076809 0.044213 0.061435 0.070019 0.080508 0.031762 0.098815 0.088159 0.047244 0.011613 0.051200 0.075729 0.039976 0.037051 0.300000 0.838292 0.472147
ntime & nrate & np: 48 2 51
Bounds (np=51):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 11.412953
np = 51
lnL0 = -13234.796520
Iterating by ming2
Initial: fx= 13234.796520
x= 0.07641 0.02769 0.06485 0.02498 0.05945 0.07434 0.09168 0.10123 0.04129 0.08950 0.10561 0.10211 0.03661 0.01668 0.04112 0.06161 0.09080 0.08413 0.03240 0.08520 0.04488 0.06246 0.02574 0.10452 0.02483 0.02225 0.04701 0.07804 0.03521 0.02741 0.09129 0.01116 0.01154 0.07538 0.07681 0.04421 0.06143 0.07002 0.08051 0.03176 0.09882 0.08816 0.04724 0.01161 0.05120 0.07573 0.03998 0.03705 0.30000 0.83829 0.47215
1 h-m-p 0.0000 0.0000 8611.3104 ++ 12665.151675 m 0.0000 56 | 1/51
2 h-m-p 0.0000 0.0000 35673.4782 ++ 12649.735688 m 0.0000 110 | 2/51
3 h-m-p 0.0000 0.0000 81488.2943 ++ 12181.652843 m 0.0000 164 | 3/51
4 h-m-p 0.0000 0.0000 555612.7522 ++ 12028.720149 m 0.0000 218 | 3/51
5 h-m-p 0.0000 0.0000 669448.8010 ++ 11795.668908 m 0.0000 272 | 3/51
6 h-m-p 0.0000 0.0000 360343.5783 ++ 11769.160901 m 0.0000 326 | 3/51
7 h-m-p 0.0000 0.0000 183044.8007 ++ 11590.041602 m 0.0000 380 | 4/51
8 h-m-p 0.0000 0.0000 34908.0998 ++ 11520.470481 m 0.0000 434 | 5/51
9 h-m-p 0.0000 0.0000 17225.9537 ++ 11267.056139 m 0.0000 488 | 5/51
10 h-m-p 0.0000 0.0000 29552.4117
h-m-p: 3.23976533e-22 1.61988267e-21 2.95524117e+04 11267.056139
.. | 5/51
11 h-m-p 0.0000 0.0000 369118.8578 --YYCYCYC 11253.199027 6 0.0000 604 | 5/51
12 h-m-p 0.0000 0.0000 9180.9510 ++ 11128.186639 m 0.0000 658 | 5/51
13 h-m-p 0.0000 0.0000 2205319.7089 ++ 10971.437099 m 0.0000 712 | 5/51
14 h-m-p 0.0000 0.0000 17476.3238 ++ 10865.807344 m 0.0000 766 | 5/51
15 h-m-p 0.0000 0.0000 219181.7162 ++ 10821.549652 m 0.0000 820 | 5/51
16 h-m-p 0.0000 0.0000 189984.3630 ++ 10808.917983 m 0.0000 874 | 5/51
17 h-m-p 0.0000 0.0000 138785.6067 +YCCYCC 10624.450650 5 0.0000 938 | 5/51
18 h-m-p 0.0000 0.0000 18558.9539 ++ 10604.958586 m 0.0000 992 | 6/51
19 h-m-p 0.0000 0.0000 23959.7453 ++ 10562.970663 m 0.0000 1046 | 6/51
20 h-m-p 0.0000 0.0000 62436.1243 +YYCCC 10561.285106 4 0.0000 1107 | 6/51
21 h-m-p 0.0000 0.0000 101410.3946 ++ 10544.340571 m 0.0000 1161 | 6/51
22 h-m-p 0.0000 0.0000 6452125.9107 +YYCCC 10510.928554 4 0.0000 1222 | 6/51
23 h-m-p 0.0000 0.0000 31754.3010 YCYCC 10509.723849 4 0.0000 1282 | 6/51
24 h-m-p 0.0000 0.0000 50976.6357 +YYYYCCCC 10492.003508 7 0.0000 1347 | 6/51
25 h-m-p 0.0000 0.0000 15050.7005 +YYYCC 10475.807462 4 0.0000 1407 | 6/51
26 h-m-p 0.0000 0.0000 8781.9138 +YYYYC 10468.986749 4 0.0000 1466 | 5/51
27 h-m-p 0.0000 0.0000 16909.9595 +YYYYCCC 10459.752347 6 0.0000 1529 | 5/51
28 h-m-p 0.0000 0.0000 5795.2766 +YYYYC 10449.566443 4 0.0000 1588 | 5/51
29 h-m-p 0.0000 0.0000 6686.6833 +YCYCCC 10436.139378 5 0.0000 1651 | 5/51
30 h-m-p 0.0000 0.0000 3400.3313 +YYCCC 10431.280072 4 0.0000 1712 | 5/51
31 h-m-p 0.0000 0.0000 5645.1344 CYCCC 10421.840356 4 0.0000 1773 | 5/51
32 h-m-p 0.0000 0.0000 6177.9775 +CYYCC 10408.037018 4 0.0000 1834 | 5/51
33 h-m-p 0.0000 0.0000 14478.2225 +YYYYYYYY 10385.363040 7 0.0000 1896 | 5/51
34 h-m-p 0.0000 0.0000 10137.2292 +YYYYCCCC 10370.072418 7 0.0000 1961 | 5/51
35 h-m-p 0.0000 0.0000 44691.3025 ++ 10336.737969 m 0.0000 2015 | 5/51
36 h-m-p 0.0000 0.0000 40961.5646 YCCCC 10321.125258 4 0.0000 2076 | 5/51
37 h-m-p 0.0000 0.0000 23792.2631 ++ 10201.490430 m 0.0000 2130 | 5/51
38 h-m-p 0.0000 0.0000 65327.4348 +CYYYYYC 10046.625372 6 0.0000 2192 | 5/51
39 h-m-p 0.0000 0.0000 81045.2355 YCCCCC 10021.756998 5 0.0000 2255 | 5/51
40 h-m-p 0.0000 0.0000 2804.0344 YCCCC 10015.907584 4 0.0000 2316 | 5/51
41 h-m-p 0.0000 0.0000 1672.8387 YCCCC 10011.703145 4 0.0000 2377 | 5/51
42 h-m-p 0.0000 0.0001 930.2843 YCCC 10006.493634 3 0.0000 2436 | 5/51
43 h-m-p 0.0000 0.0001 1446.0326 CCC 10002.440095 2 0.0000 2494 | 5/51
44 h-m-p 0.0000 0.0001 544.8548 YC 10001.451488 1 0.0000 2549 | 5/51
45 h-m-p 0.0000 0.0003 169.6302 CC 10001.293071 1 0.0000 2605 | 5/51
46 h-m-p 0.0000 0.0003 87.2235 YC 10001.238931 1 0.0000 2660 | 5/51
47 h-m-p 0.0000 0.0012 138.7055 +CC 10000.992700 1 0.0001 2717 | 5/51
48 h-m-p 0.0000 0.0004 417.9305 CYC 10000.738268 2 0.0000 2774 | 5/51
49 h-m-p 0.0001 0.0004 123.5963 YC 10000.693192 1 0.0000 2829 | 5/51
50 h-m-p 0.0001 0.0013 23.0553 C 10000.686072 0 0.0000 2883 | 5/51
51 h-m-p 0.0002 0.0184 2.1266 +CC 10000.409204 1 0.0014 2940 | 5/51
52 h-m-p 0.0000 0.0009 112.8000 ++YYCC 9993.807868 3 0.0003 3000 | 5/51
53 h-m-p 0.0000 0.0001 1204.5180 CCCC 9990.155130 3 0.0000 3060 | 5/51
54 h-m-p 0.0000 0.0002 84.1211 CCC 9990.106115 2 0.0000 3118 | 5/51
55 h-m-p 0.0004 0.0125 3.1968 YC 9990.069730 1 0.0003 3173 | 5/51
56 h-m-p 0.0000 0.0057 25.0516 +++YYYC 9982.028630 3 0.0020 3233 | 5/51
57 h-m-p 0.0000 0.0000 2050.9746 CCCC 9978.538826 3 0.0000 3293 | 5/51
58 h-m-p 0.0001 0.0003 78.9336 YC 9978.513184 1 0.0000 3348 | 5/51
59 h-m-p 0.0019 0.5086 0.3611 ++++YYYCYCC 9950.419834 6 0.4580 3414 | 5/51
60 h-m-p 0.0526 0.2628 2.8822 +YCCC 9890.254593 3 0.2311 3520 | 5/51
61 h-m-p 0.1443 0.7213 0.5634 +CYYCC 9859.010674 4 0.6261 3581 | 5/51
62 h-m-p 0.0307 0.1535 0.3224 +YYCYYCC 9853.756358 6 0.1342 3691 | 5/51
63 h-m-p 0.2187 1.0936 0.0866 YCCCC 9840.976034 4 0.3839 3798 | 5/51
64 h-m-p 0.4083 2.5507 0.0814 YCCCC 9832.239995 4 1.0704 3905 | 5/51
65 h-m-p 0.2554 1.2769 0.1140 +YYYCC 9826.289012 4 0.9333 4011 | 5/51
66 h-m-p 0.2750 1.3750 0.1520 +CCYC 9819.486192 3 1.0841 4117 | 5/51
67 h-m-p 0.4925 2.4624 0.2080 YCC 9814.738246 2 0.7775 4220 | 5/51
68 h-m-p 0.3691 1.8454 0.2402 +YYC 9808.756649 2 1.3486 4323 | 5/51
69 h-m-p 0.5552 2.7761 0.2202 YCC 9805.735836 2 1.1307 4426 | 5/51
70 h-m-p 1.1062 5.5312 0.1970 CCCC 9802.007429 3 1.7453 4532 | 5/51
71 h-m-p 0.9074 4.5370 0.2296 CCCC 9799.659629 3 1.4602 4638 | 5/51
72 h-m-p 0.8581 4.2903 0.2392 YC 9797.856209 1 1.6028 4739 | 5/51
73 h-m-p 1.6000 8.0000 0.1631 CYC 9796.755846 2 1.6970 4842 | 5/51
74 h-m-p 1.6000 8.0000 0.0850 CCC 9796.254287 2 1.5689 4946 | 5/51
75 h-m-p 1.6000 8.0000 0.0568 CC 9795.914100 1 2.2818 5048 | 5/51
76 h-m-p 1.6000 8.0000 0.0331 CCC 9795.622951 2 2.3049 5152 | 5/51
77 h-m-p 1.6000 8.0000 0.0026 CC 9795.295299 1 2.4243 5254 | 5/51
78 h-m-p 0.3768 8.0000 0.0165 +CC 9795.124012 1 1.7755 5357 | 5/51
79 h-m-p 1.6000 8.0000 0.0113 CC 9795.010688 1 2.5223 5459 | 5/51
80 h-m-p 1.6000 8.0000 0.0036 CC 9794.892579 1 2.2330 5561 | 5/51
81 h-m-p 0.5556 8.0000 0.0146 +YC 9794.821516 1 1.8313 5663 | 5/51
82 h-m-p 1.6000 8.0000 0.0139 YC 9794.730626 1 3.1525 5764 | 5/51
83 h-m-p 1.6000 8.0000 0.0080 YC 9794.611998 1 3.0037 5865 | 5/51
84 h-m-p 1.6000 8.0000 0.0047 YC 9794.425161 1 3.7209 5966 | 5/51
85 h-m-p 0.7963 7.3471 0.0219 YC 9794.252967 1 1.6730 6067 | 5/51
86 h-m-p 1.6000 8.0000 0.0155 CCC 9794.118587 2 1.9618 6171 | 5/51
87 h-m-p 1.5644 8.0000 0.0195 CC 9794.000038 1 1.9197 6273 | 5/51
88 h-m-p 1.3407 8.0000 0.0279 YC 9793.903062 1 2.1716 6374 | 5/51
89 h-m-p 1.6000 8.0000 0.0031 CC 9793.861308 1 2.1519 6476 | 5/51
90 h-m-p 1.6000 8.0000 0.0034 YC 9793.810408 1 3.2806 6577 | 5/51
91 h-m-p 1.6000 8.0000 0.0018 YC 9793.717680 1 3.7876 6678 | 5/51
92 h-m-p 0.3724 8.0000 0.0181 ++CC 9793.472127 1 6.2424 6782 | 5/51
93 h-m-p 1.6000 8.0000 0.0122 CC 9793.316478 1 2.0347 6884 | 5/51
94 h-m-p 1.6000 8.0000 0.0007 YC 9793.204178 1 3.6817 6985 | 5/51
95 h-m-p 0.1081 8.0000 0.0249 ++CC 9793.163872 1 1.6256 7089 | 5/51
96 h-m-p 1.6000 8.0000 0.0195 CC 9793.143688 1 2.1129 7191 | 5/51
97 h-m-p 1.6000 8.0000 0.0004 YC 9793.129784 1 2.8947 7292 | 5/51
98 h-m-p 0.2564 8.0000 0.0045 ++YC 9793.090717 1 5.9090 7395 | 5/51
99 h-m-p 1.6000 8.0000 0.0076 CC 9793.068210 1 2.2439 7497 | 5/51
100 h-m-p 1.6000 8.0000 0.0072 CC 9793.056327 1 2.1648 7599 | 5/51
101 h-m-p 1.6000 8.0000 0.0019 +YC 9793.032679 1 5.1992 7701 | 5/51
102 h-m-p 0.9423 8.0000 0.0105 YC 9793.017796 1 2.1796 7802 | 5/51
103 h-m-p 1.6000 8.0000 0.0063 +C 9792.996501 0 6.2711 7903 | 5/51
104 h-m-p 1.6000 8.0000 0.0012 +YC 9792.939858 1 4.2391 8005 | 5/51
105 h-m-p 0.2523 8.0000 0.0198 +YC 9792.899862 1 2.1691 8107 | 5/51
106 h-m-p 1.6000 8.0000 0.0006 CC 9792.892729 1 1.3757 8209 | 5/51
107 h-m-p 0.5706 8.0000 0.0015 +YC 9792.888447 1 3.9150 8311 | 5/51
108 h-m-p 1.6000 8.0000 0.0003 YC 9792.884156 1 2.9577 8412 | 5/51
109 h-m-p 0.7503 8.0000 0.0011 ++ 9792.871138 m 8.0000 8512 | 5/51
110 h-m-p 1.6000 8.0000 0.0026 YC 9792.844578 1 3.1736 8613 | 5/51
111 h-m-p 1.6000 8.0000 0.0005 YC 9792.806279 1 3.2905 8714 | 5/51
112 h-m-p 0.3144 8.0000 0.0048 +YC 9792.793132 1 2.5392 8816 | 5/51
113 h-m-p 1.6000 8.0000 0.0013 C 9792.790094 0 1.3977 8916 | 5/51
114 h-m-p 1.6000 8.0000 0.0009 Y 9792.789746 0 1.0533 9016 | 5/51
115 h-m-p 1.6000 8.0000 0.0004 C 9792.789578 0 2.2818 9116 | 5/51
116 h-m-p 1.6000 8.0000 0.0000 Y 9792.789357 0 3.6515 9216 | 5/51
117 h-m-p 0.0851 8.0000 0.0010 ++Y 9792.789201 0 2.5864 9318 | 5/51
118 h-m-p 1.6000 8.0000 0.0000 ++ 9792.788852 m 8.0000 9418 | 5/51
119 h-m-p 1.6000 8.0000 0.0000 ++ 9792.785716 m 8.0000 9518 | 5/51
120 h-m-p 0.0705 8.0000 0.0031 ++CC 9792.778949 1 1.6971 9622 | 5/51
121 h-m-p 1.6000 8.0000 0.0011 C 9792.777064 0 1.6610 9722 | 5/51
122 h-m-p 1.6000 8.0000 0.0001 Y 9792.777040 0 2.7546 9822 | 5/51
123 h-m-p 1.6000 8.0000 0.0001 ++ 9792.776792 m 8.0000 9922 | 5/51
124 h-m-p 0.2290 8.0000 0.0030 +YC 9792.775090 1 1.9547 10024 | 5/51
125 h-m-p 1.6000 8.0000 0.0011 YC 9792.773316 1 3.1552 10125 | 5/51
126 h-m-p 1.6000 8.0000 0.0001 C 9792.773307 0 2.4476 10225 | 5/51
127 h-m-p 1.6000 8.0000 0.0001 ++ 9792.773284 m 8.0000 10325 | 5/51
128 h-m-p 1.6000 8.0000 0.0000 ++ 9792.773012 m 8.0000 10425 | 5/51
129 h-m-p 0.4445 8.0000 0.0002 Y 9792.772859 0 1.0400 10525 | 5/51
130 h-m-p 1.6000 8.0000 0.0000 -C 9792.772859 0 0.1000 10626 | 5/51
131 h-m-p 0.1201 8.0000 0.0000 Y 9792.772859 0 0.0603 10726 | 5/51
132 h-m-p 0.0503 8.0000 0.0000 C 9792.772859 0 0.0727 10826 | 5/51
133 h-m-p 0.0629 8.0000 0.0001 C 9792.772859 0 0.0545 10926 | 5/51
134 h-m-p 0.0669 8.0000 0.0000 C 9792.772859 0 0.0669 11026 | 5/51
135 h-m-p 0.0651 8.0000 0.0000 C 9792.772859 0 0.0669 11126 | 5/51
136 h-m-p 0.0643 8.0000 0.0000 C 9792.772859 0 0.0843 11226 | 5/51
137 h-m-p 0.0913 8.0000 0.0000 C 9792.772859 0 0.0776 11326 | 5/51
138 h-m-p 0.0733 8.0000 0.0000 C 9792.772859 0 0.0733 11426 | 5/51
139 h-m-p 0.0711 8.0000 0.0000 C 9792.772859 0 0.1032 11526 | 5/51
140 h-m-p 0.1044 8.0000 0.0000 C 9792.772859 0 0.1044 11626 | 5/51
141 h-m-p 0.1028 8.0000 0.0000 C 9792.772859 0 0.1028 11726 | 5/51
142 h-m-p 0.0932 8.0000 0.0000 C 9792.772859 0 0.0932 11826 | 5/51
143 h-m-p 0.1172 8.0000 0.0000 C 9792.772859 0 0.1321 11926 | 5/51
144 h-m-p 0.1068 8.0000 0.0000 C 9792.772859 0 0.1336 12026 | 5/51
145 h-m-p 0.1446 8.0000 0.0000 C 9792.772859 0 0.1446 12126 | 5/51
146 h-m-p 0.1370 8.0000 0.0000 C 9792.772859 0 0.1684 12226 | 5/51
147 h-m-p 0.1753 8.0000 0.0000 C 9792.772859 0 0.1842 12326 | 5/51
148 h-m-p 0.1782 8.0000 0.0000 C 9792.772859 0 0.2142 12426 | 5/51
149 h-m-p 0.2186 8.0000 0.0000 C 9792.772859 0 0.2504 12526 | 5/51
150 h-m-p 0.2545 8.0000 0.0000 C 9792.772859 0 0.2973 12626 | 5/51
151 h-m-p 0.3217 8.0000 0.0000 C 9792.772859 0 0.3633 12726 | 5/51
152 h-m-p 0.3766 8.0000 0.0000 C 9792.772859 0 0.4640 12826 | 5/51
153 h-m-p 0.5190 8.0000 0.0000 C 9792.772859 0 0.6184 12926 | 5/51
154 h-m-p 0.8747 8.0000 0.0000 C 9792.772858 0 0.8747 13026 | 5/51
155 h-m-p 1.6000 8.0000 0.0000 C 9792.772856 0 1.3411 13126 | 5/51
156 h-m-p 0.0898 8.0000 0.0000 ++C 9792.772850 0 2.0743 13228 | 5/51
157 h-m-p 0.6680 8.0000 0.0002 +Y 9792.772837 0 2.2454 13329 | 5/51
158 h-m-p 1.6000 8.0000 0.0000 C 9792.772830 0 2.0521 13429 | 5/51
159 h-m-p 1.6000 8.0000 0.0000 -C 9792.772830 0 0.0886 13530 | 5/51
160 h-m-p 0.0780 8.0000 0.0000 Y 9792.772830 0 0.0371 13630 | 5/51
161 h-m-p 0.0670 8.0000 0.0000 C 9792.772830 0 0.0168 13730 | 5/51
162 h-m-p 0.0160 8.0000 0.0000 +C 9792.772830 0 0.0640 13831 | 5/51
163 h-m-p 0.0756 8.0000 0.0000 ----C 9792.772830 0 0.0001 13935
Out..
lnL = -9792.772830
13936 lfun, 41808 eigenQcodon, 1337856 P(t)
end of tree file.
Time used: 18:18
Model 2: PositiveSelection
TREE # 1
(12, 16, 8, 24, (((((11, 23), (((((13, 28), 7), 27), 14), (((17, (21, 26, 4, 30, 1, 15, 19)), ((22, 10, 25), 3)), (2, 5))), 29), 9), 6), (18, 20))); MP score: 513
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
37
0.073033 0.020675 0.045588 0.034855 0.045673 0.013304 0.015789 0.067029 0.068132 0.016368 0.107527 0.014272 0.047331 0.101239 0.106262 0.011349 0.074445 0.083936 0.098940 0.022837 0.031516 0.078629 0.023137 0.052636 0.109286 0.028396 0.026641 0.070576 0.103466 0.086667 0.092182 0.067049 0.031588 0.097775 0.056982 0.021608 0.087674 0.100086 0.031812 0.046465 0.026865 0.050103 0.099256 0.040831 0.047228 0.041025 0.045858 0.067031 5.179589 0.809216 0.370783 0.291364 1.363290
ntime & nrate & np: 48 3 53
Bounds (np=53):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 2.792077
np = 53
lnL0 = -12194.529485
Iterating by ming2
Initial: fx= 12194.529485
x= 0.07303 0.02068 0.04559 0.03486 0.04567 0.01330 0.01579 0.06703 0.06813 0.01637 0.10753 0.01427 0.04733 0.10124 0.10626 0.01135 0.07445 0.08394 0.09894 0.02284 0.03152 0.07863 0.02314 0.05264 0.10929 0.02840 0.02664 0.07058 0.10347 0.08667 0.09218 0.06705 0.03159 0.09778 0.05698 0.02161 0.08767 0.10009 0.03181 0.04647 0.02686 0.05010 0.09926 0.04083 0.04723 0.04102 0.04586 0.06703 5.17959 0.80922 0.37078 0.29136 1.36329
1 h-m-p 0.0000 0.0000 6609.3409 ++ 11591.527916 m 0.0000 58 | 0/53
2 h-m-p 0.0000 0.0000 52620.1057 ++ 11534.415785 m 0.0000 114 | 0/53
3 h-m-p 0.0000 0.0000 52529.7828 ++ 11262.360893 m 0.0000 170 | 1/53
4 h-m-p 0.0000 0.0000 85575.6352 ++ 11138.719970 m 0.0000 226 | 1/53
5 h-m-p 0.0000 0.0000 269033.3743 ++ 11128.676168 m 0.0000 282 | 2/53
6 h-m-p 0.0000 0.0000 214814.0327 ++ 11048.555993 m 0.0000 338 | 3/53
7 h-m-p 0.0000 0.0000 4680983.2084 ++ 10693.991931 m 0.0000 394 | 3/53
8 h-m-p 0.0000 0.0000 147335.2010 ++ 10610.036567 m 0.0000 450 | 3/53
9 h-m-p 0.0000 0.0000 206073.4546 ++ 10552.758226 m 0.0000 506 | 3/53
10 h-m-p 0.0000 0.0000 114262.6268 ++ 10530.940245 m 0.0000 562 | 3/53
11 h-m-p 0.0000 0.0000 84452.3350 ++ 10512.398694 m 0.0000 618 | 3/53
12 h-m-p 0.0000 0.0000 199510.7821 ++ 10398.847557 m 0.0000 674 | 4/53
13 h-m-p 0.0000 0.0000 98071.9607 ++ 10321.178402 m 0.0000 730 | 4/53
14 h-m-p -0.0000 -0.0000 57599.9583
h-m-p: -1.14967244e-23 -5.74836219e-23 5.75999583e+04 10321.178402
.. | 4/53
15 h-m-p 0.0000 0.0000 170847.3500 -YCYYCCC 10304.978365 6 0.0000 849 | 4/53
16 h-m-p 0.0000 0.0000 11887.1677 YYCCCC 10262.529849 5 0.0000 913 | 4/53
17 h-m-p 0.0000 0.0000 5198.6687 ++ 10202.715789 m 0.0000 969 | 4/53
18 h-m-p 0.0000 0.0000 33599.1496 ++ 10169.616821 m 0.0000 1025 | 4/53
19 h-m-p 0.0000 0.0000 199794.8676 ++ 10163.452282 m 0.0000 1081 | 4/53
20 h-m-p 0.0000 0.0000 459629.6103 ++ 10153.923908 m 0.0000 1137 | 4/53
21 h-m-p 0.0000 0.0000 226324.5364 ++ 10079.226047 m 0.0000 1193 | 4/53
22 h-m-p 0.0000 0.0000 50626.5679 CCC 10079.104789 2 0.0000 1253 | 4/53
23 h-m-p 0.0000 0.0000 162719.5664 +YYCYCCC 10072.629145 6 0.0000 1319 | 4/53
24 h-m-p 0.0000 0.0000 43414.0421 ++ 10067.888888 m 0.0000 1375 | 5/53
25 h-m-p 0.0000 0.0000 19207.7333 +YYCCYC 10002.901386 5 0.0000 1440 | 5/53
26 h-m-p 0.0000 0.0000 10965.8816 +YYCYCYC 9996.699532 6 0.0000 1506 | 5/53
27 h-m-p 0.0000 0.0000 16401.8036 +YYCCC 9995.830796 4 0.0000 1569 | 5/53
28 h-m-p 0.0000 0.0000 24367.4162 +YYCCC 9961.822023 4 0.0000 1632 | 5/53
29 h-m-p 0.0000 0.0000 2431.4392 YCCCC 9954.010704 4 0.0000 1695 | 5/53
30 h-m-p 0.0000 0.0000 2428.2503 +YYYY 9950.684508 3 0.0000 1755 | 5/53
31 h-m-p 0.0000 0.0000 2471.4126 CCC 9948.867475 2 0.0000 1815 | 5/53
32 h-m-p 0.0000 0.0000 750.4439 YCY 9947.867316 2 0.0000 1874 | 5/53
33 h-m-p 0.0000 0.0000 719.4679 CCCC 9946.864173 3 0.0000 1936 | 5/53
34 h-m-p 0.0000 0.0000 808.8355 YC 9946.363459 1 0.0000 1993 | 5/53
35 h-m-p 0.0000 0.0003 476.1847 +CCC 9943.187306 2 0.0001 2054 | 5/53
36 h-m-p 0.0000 0.0000 4144.4183 ++ 9918.195664 m 0.0000 2110 | 6/53
37 h-m-p 0.0000 0.0001 2026.4494 CYC 9917.602732 2 0.0000 2169 | 6/53
38 h-m-p 0.0000 0.0000 2801.9164 CCCC 9916.481118 3 0.0000 2231 | 6/53
39 h-m-p 0.0000 0.0002 654.0386 YCCC 9915.935220 3 0.0000 2292 | 6/53
40 h-m-p 0.0000 0.0001 650.4398 CCCC 9915.367543 3 0.0000 2354 | 6/53
41 h-m-p 0.0000 0.0003 688.5923 CCC 9914.767591 2 0.0000 2414 | 6/53
42 h-m-p 0.0000 0.0003 492.1475 CCC 9914.170110 2 0.0000 2474 | 6/53
43 h-m-p 0.0000 0.0002 649.5862 +YCCC 9912.322768 3 0.0001 2536 | 6/53
44 h-m-p 0.0000 0.0001 3984.2082 +CYYYC 9903.019917 4 0.0001 2598 | 6/53
45 h-m-p 0.0000 0.0000 16723.0975 ++ 9884.947689 m 0.0000 2654 | 7/53
46 h-m-p 0.0000 0.0000 11953.3114 YCCC 9878.266178 3 0.0000 2715 | 7/53
47 h-m-p 0.0000 0.0001 1079.5895 YC 9877.845519 1 0.0000 2772 | 7/53
48 h-m-p 0.0000 0.0002 131.1754 CC 9877.790234 1 0.0000 2830 | 7/53
49 h-m-p 0.0000 0.0004 41.8759 CC 9877.779246 1 0.0000 2888 | 7/53
50 h-m-p 0.0000 0.0011 17.5131 YC 9877.775765 1 0.0000 2945 | 7/53
51 h-m-p 0.0000 0.0021 13.2004 YC 9877.767103 1 0.0000 3002 | 7/53
52 h-m-p 0.0000 0.0018 39.3292 ++YC 9877.658000 1 0.0002 3061 | 7/53
53 h-m-p 0.0000 0.0006 540.8599 ++YCCC 9876.351010 3 0.0001 3124 | 7/53
54 h-m-p 0.0000 0.0002 6651.2155 +YCYCCC 9864.911718 5 0.0001 3189 | 7/53
55 h-m-p 0.0000 0.0001 6871.6436 YCC 9863.500364 2 0.0000 3248 | 7/53
56 h-m-p 0.0002 0.0008 50.4833 -C 9863.493828 0 0.0000 3305 | 7/53
57 h-m-p 0.0000 0.0013 15.5580 YC 9863.491017 1 0.0000 3362 | 7/53
58 h-m-p 0.0000 0.0032 14.1275 +YC 9863.462898 1 0.0001 3420 | 7/53
59 h-m-p 0.0000 0.0017 180.0004 ++YCCC 9862.112379 3 0.0004 3483 | 7/53
60 h-m-p 0.0000 0.0001 8689.8359 +YCCYC 9843.237945 4 0.0001 3547 | 7/53
61 h-m-p 0.0001 0.0007 37.1671 -YC 9843.229209 1 0.0000 3605 | 7/53
62 h-m-p 0.0001 0.0642 11.4382 ++++YCYCCC 9829.629073 5 0.0400 3673 | 7/53
63 h-m-p 0.0752 0.3761 3.7514 YCCC 9821.627265 3 0.1528 3734 | 6/53
64 h-m-p 0.0021 0.0105 85.1212 -YC 9821.570839 1 0.0002 3792 | 6/53
65 h-m-p 0.0060 1.4401 3.0739 +++CYCCC 9811.761603 4 0.5488 3858 | 6/53
66 h-m-p 0.1926 0.9630 1.4805 CCC 9808.953578 2 0.3156 3918 | 6/53
67 h-m-p 0.2922 1.4608 0.5332 YCCCC 9805.121394 4 0.5750 3981 | 6/53
68 h-m-p 0.1601 0.8007 0.8099 YCCCC 9802.414374 4 0.3836 4091 | 6/53
69 h-m-p 0.2082 1.0408 0.2331 CCCC 9801.631852 3 0.3106 4200 | 5/53
70 h-m-p 0.1601 1.0218 0.4522 YCCC 9801.122080 3 0.3044 4308 | 5/53
71 h-m-p 0.0653 0.3263 0.4910 ++ 9800.583710 m 0.3263 4412 | 5/53
72 h-m-p 0.2030 3.4303 0.7890 CC 9800.272272 1 0.2605 4518 | 5/53
73 h-m-p 0.3636 1.8181 0.3265 CCC 9799.741597 2 0.4441 4626 | 5/53
74 h-m-p 0.4126 6.3444 0.3515 +YYC 9798.558914 2 1.3563 4733 | 5/53
75 h-m-p 0.5778 2.8891 0.7717 YCCC 9796.782113 3 1.2876 4842 | 5/53
76 h-m-p 0.5897 2.9483 1.0517 CCC 9795.573964 2 0.7346 4950 | 5/53
77 h-m-p 0.3121 1.5607 0.4337 CCCC 9794.848772 3 0.4901 5012 | 5/53
78 h-m-p 0.6387 4.2944 0.3328 CC 9794.450213 1 0.8701 5118 | 5/53
79 h-m-p 0.5748 2.8738 0.3272 CCC 9794.165335 2 0.8036 5226 | 5/53
80 h-m-p 1.0016 5.0078 0.1573 CCC 9793.796716 2 1.4778 5334 | 5/53
81 h-m-p 0.9685 5.3345 0.2401 YCCC 9793.206422 3 1.8886 5443 | 5/53
82 h-m-p 0.1770 0.8852 0.5797 YCYC 9792.801399 3 0.4282 5551 | 5/53
83 h-m-p 0.7361 3.6807 0.2549 CCCC 9792.338502 3 0.8739 5661 | 5/53
84 h-m-p 0.6037 3.6229 0.3690 CCC 9792.096523 2 0.8957 5769 | 5/53
85 h-m-p 1.6000 8.0000 0.1413 YC 9791.947866 1 1.0794 5874 | 5/53
86 h-m-p 0.8120 8.0000 0.1878 CC 9791.874653 1 1.2410 5980 | 5/53
87 h-m-p 1.6000 8.0000 0.0726 YC 9791.854144 1 1.1638 6085 | 5/53
88 h-m-p 1.6000 8.0000 0.0441 C 9791.842717 0 1.6473 6189 | 5/53
89 h-m-p 1.6000 8.0000 0.0325 YC 9791.825309 1 2.5928 6294 | 5/53
90 h-m-p 1.6000 8.0000 0.0355 CC 9791.797120 1 2.0948 6400 | 5/53
91 h-m-p 1.6000 8.0000 0.0322 YCC 9791.766529 2 1.0944 6507 | 5/53
92 h-m-p 0.6498 8.0000 0.0542 YC 9791.751649 1 1.1952 6612 | 5/53
93 h-m-p 1.6000 8.0000 0.0200 CC 9791.744051 1 1.4188 6718 | 5/53
94 h-m-p 1.3558 8.0000 0.0210 YC 9791.737997 1 2.4896 6823 | 5/53
95 h-m-p 1.6000 8.0000 0.0199 YC 9791.726030 1 3.1576 6928 | 5/53
96 h-m-p 1.3090 8.0000 0.0479 CC 9791.708476 1 2.0920 7034 | 5/53
97 h-m-p 1.6000 8.0000 0.0238 C 9791.700370 0 1.7633 7138 | 5/53
98 h-m-p 1.6000 8.0000 0.0111 YC 9791.691594 1 2.7951 7243 | 5/53
99 h-m-p 1.2543 8.0000 0.0248 YC 9791.684765 1 2.3708 7348 | 5/53
100 h-m-p 1.6000 8.0000 0.0155 C 9791.683132 0 1.4622 7452 | 5/53
101 h-m-p 1.6000 8.0000 0.0008 YC 9791.682404 1 3.1133 7557 | 5/53
102 h-m-p 1.3085 8.0000 0.0018 +C 9791.679931 0 5.5663 7662 | 5/53
103 h-m-p 0.6497 8.0000 0.0155 +YC 9791.672179 1 4.2751 7768 | 5/53
104 h-m-p 1.6000 8.0000 0.0119 C 9791.669826 0 1.3831 7872 | 5/53
105 h-m-p 1.6000 8.0000 0.0023 C 9791.669630 0 1.4190 7976 | 5/53
106 h-m-p 1.1097 8.0000 0.0030 +Y 9791.669563 0 2.9768 8081 | 5/53
107 h-m-p 1.2264 8.0000 0.0073 ++ 9791.668993 m 8.0000 8185 | 5/53
108 h-m-p 1.6000 8.0000 0.0302 C 9791.668496 0 1.9783 8289 | 5/53
109 h-m-p 1.6000 8.0000 0.0021 C 9791.668447 0 1.4406 8393 | 5/53
110 h-m-p 1.6000 8.0000 0.0006 Y 9791.668417 0 3.9817 8497 | 5/53
111 h-m-p 1.6000 8.0000 0.0005 ++ 9791.668065 m 8.0000 8601 | 5/53
112 h-m-p 0.2486 8.0000 0.0146 +YC 9791.667093 1 2.1099 8707 | 5/53
113 h-m-p 1.4660 8.0000 0.0210 C 9791.666591 0 1.9654 8811 | 5/53
114 h-m-p 1.6000 8.0000 0.0014 ++ 9791.666471 m 8.0000 8915 | 5/53
115 h-m-p 1.6000 8.0000 0.0021 ++ 9791.665632 m 8.0000 9019 | 5/53
116 h-m-p 1.6000 8.0000 0.0071 C 9791.664473 0 1.6476 9123 | 5/53
117 h-m-p 1.2447 8.0000 0.0095 Y 9791.664153 0 2.0136 9227 | 5/53
118 h-m-p 1.6000 8.0000 0.0003 ++ 9791.663176 m 8.0000 9331 | 5/53
119 h-m-p 0.2409 8.0000 0.0112 +C 9791.661128 0 1.2081 9436 | 5/53
120 h-m-p 1.6000 8.0000 0.0048 C 9791.660896 0 1.5581 9540 | 5/53
121 h-m-p 1.6000 8.0000 0.0004 C 9791.660893 0 1.8754 9644 | 5/53
122 h-m-p 1.6000 8.0000 0.0003 --Y 9791.660893 0 0.0486 9750 | 5/53
123 h-m-p 0.0498 8.0000 0.0003 ------Y 9791.660893 0 0.0000 9860
Out..
lnL = -9791.660893
9861 lfun, 39444 eigenQcodon, 1419984 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -9802.725892 S = -9391.369262 -403.280725
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 407 patterns 38:02
did 20 / 407 patterns 38:02
did 30 / 407 patterns 38:02
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did 407 / 407 patterns 38:04end of tree file.
Time used: 38:05
Model 7: beta
TREE # 1
(12, 16, 8, 24, (((((11, 23), (((((13, 28), 7), 27), 14), (((17, (21, 26, 4, 30, 1, 15, 19)), ((22, 10, 25), 3)), (2, 5))), 29), 9), 6), (18, 20))); MP score: 513
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
37
0.021893 0.036645 0.085094 0.051471 0.052317 0.093950 0.053100 0.083629 0.084947 0.020501 0.077510 0.025137 0.013573 0.066978 0.011030 0.073489 0.018770 0.077650 0.027334 0.065820 0.011135 0.026207 0.021661 0.013715 0.109179 0.033528 0.082809 0.047297 0.094087 0.015820 0.066201 0.054524 0.058512 0.086562 0.072711 0.076644 0.041606 0.010704 0.012939 0.095736 0.017465 0.084537 0.011626 0.025283 0.079178 0.089697 0.081890 0.089703 5.226410 0.456777 1.347155
ntime & nrate & np: 48 1 51
Bounds (np=51):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 5.155337
np = 51
lnL0 = -12024.091328
Iterating by ming2
Initial: fx= 12024.091328
x= 0.02189 0.03665 0.08509 0.05147 0.05232 0.09395 0.05310 0.08363 0.08495 0.02050 0.07751 0.02514 0.01357 0.06698 0.01103 0.07349 0.01877 0.07765 0.02733 0.06582 0.01114 0.02621 0.02166 0.01372 0.10918 0.03353 0.08281 0.04730 0.09409 0.01582 0.06620 0.05452 0.05851 0.08656 0.07271 0.07664 0.04161 0.01070 0.01294 0.09574 0.01746 0.08454 0.01163 0.02528 0.07918 0.08970 0.08189 0.08970 5.22641 0.45678 1.34715
1 h-m-p 0.0000 0.0000 6287.3351 ++ 11609.832452 m 0.0000 56 | 0/51
2 h-m-p 0.0000 0.0000 248113.8136 ++ 11511.193073 m 0.0000 110 | 0/51
3 h-m-p 0.0000 0.0000 66700.4328 ++ 11408.030441 m 0.0000 164 | 0/51
4 h-m-p 0.0000 0.0000 699513.0538 ++ 11402.870442 m 0.0000 218 | 1/51
5 h-m-p 0.0000 0.0000 710680.5598 ++ 11109.015343 m 0.0000 272 | 1/51
6 h-m-p 0.0000 0.0000 219206.1429 ++ 10983.217695 m 0.0000 326 | 1/51
7 h-m-p 0.0000 0.0000 148987.6209 ++ 10763.576886 m 0.0000 380 | 1/51
8 h-m-p 0.0000 0.0000 647883.8816 +CYCYYCC 10692.685134 6 0.0000 445 | 1/51
9 h-m-p 0.0000 0.0000 149344.6402 ++ 10606.441685 m 0.0000 499 | 2/51
10 h-m-p 0.0000 0.0000 288542.2167 ++ 10535.058811 m 0.0000 553 | 3/51
11 h-m-p 0.0000 0.0000 92207.2783 ++ 10453.316342 m 0.0000 607 | 4/51
12 h-m-p 0.0000 0.0000 100301.4948 ++ 10363.756734 m 0.0000 661 | 4/51
13 h-m-p 0.0000 0.0000 371267.6998 ++ 10317.810979 m 0.0000 715 | 5/51
14 h-m-p 0.0000 0.0000 27132.6191 ++ 10177.839269 m 0.0000 769 | 5/51
15 h-m-p 0.0000 0.0000 54980.7649 ++ 10120.320461 m 0.0000 823 | 4/51
16 h-m-p -0.0000 -0.0000 285487.3010
h-m-p: -7.86683436e-25 -3.93341718e-24 2.85487301e+05 10120.320461
.. | 4/51
17 h-m-p 0.0000 0.0000 245630.4534 YCYYYCC 10040.304721 6 0.0000 936 | 4/51
18 h-m-p 0.0000 0.0000 11094.8671 ++ 10006.915597 m 0.0000 990 | 5/51
19 h-m-p 0.0000 0.0000 5924.8661 ++ 9951.843987 m 0.0000 1044 | 5/51
20 h-m-p 0.0000 0.0000 81416.4399 +YYYYYC 9942.267941 5 0.0000 1104 | 5/51
21 h-m-p 0.0000 0.0000 17355.7648 ++ 9926.725639 m 0.0000 1158 | 5/51
22 h-m-p 0.0000 0.0000 36215.5887 +YCCCC 9922.500636 4 0.0000 1220 | 5/51
23 h-m-p 0.0000 0.0000 80171.1531 +CYYYYC 9912.845690 5 0.0000 1281 | 5/51
24 h-m-p 0.0000 0.0000 35565.7426 +YYCYYCC 9905.434763 6 0.0000 1345 | 5/51
25 h-m-p 0.0000 0.0000 11081.3350 +CCC 9894.539093 2 0.0000 1405 | 5/51
26 h-m-p 0.0000 0.0000 378906.7920 +YYCCC 9888.916381 4 0.0000 1466 | 5/51
27 h-m-p 0.0000 0.0000 9721.1970 +CYCYC 9872.513275 4 0.0000 1527 | 5/51
28 h-m-p 0.0000 0.0000 7332.9768 +YYYCCC 9862.946522 5 0.0000 1589 | 5/51
29 h-m-p 0.0000 0.0000 5010.1644 YCYCCC 9852.318590 5 0.0000 1651 | 5/51
30 h-m-p 0.0000 0.0000 4201.4536 CCC 9850.384041 2 0.0000 1709 | 5/51
31 h-m-p 0.0000 0.0000 2671.4151 YCCC 9847.998765 3 0.0000 1768 | 5/51
32 h-m-p 0.0000 0.0000 2450.8185 YCCC 9845.318729 3 0.0000 1827 | 5/51
33 h-m-p 0.0000 0.0000 7514.9218 CCC 9844.008837 2 0.0000 1885 | 5/51
34 h-m-p 0.0000 0.0000 1031.8749 CC 9843.187500 1 0.0000 1941 | 5/51
35 h-m-p 0.0000 0.0000 1174.9319 YC 9842.777972 1 0.0000 1996 | 5/51
36 h-m-p 0.0000 0.0000 626.4798 YYC 9842.621095 2 0.0000 2052 | 5/51
37 h-m-p 0.0000 0.0000 306.1752 YC 9842.527492 1 0.0000 2107 | 5/51
38 h-m-p 0.0000 0.0000 458.9768 CCC 9842.246836 2 0.0000 2165 | 5/51
39 h-m-p 0.0000 0.0000 761.4302 CC 9842.096096 1 0.0000 2221 | 5/51
40 h-m-p 0.0000 0.0000 596.6595 YCC 9841.954252 2 0.0000 2278 | 5/51
41 h-m-p 0.0000 0.0001 338.2723 YC 9841.847982 1 0.0000 2333 | 5/51
42 h-m-p 0.0000 0.0000 601.5758 CCC 9841.704188 2 0.0000 2391 | 5/51
43 h-m-p 0.0000 0.0002 830.9534 +YC 9840.736933 1 0.0000 2447 | 5/51
44 h-m-p 0.0000 0.0001 2948.8097 YCCC 9837.564523 3 0.0000 2506 | 5/51
45 h-m-p 0.0000 0.0000 7915.1675 YYYC 9834.542837 3 0.0000 2563 | 5/51
46 h-m-p 0.0000 0.0000 3745.3339 CYC 9833.687993 2 0.0000 2620 | 5/51
47 h-m-p 0.0000 0.0000 2522.4433 YCC 9833.169000 2 0.0000 2677 | 5/51
48 h-m-p 0.0000 0.0001 464.9763 YCC 9833.100949 2 0.0000 2734 | 5/51
49 h-m-p 0.0000 0.0001 339.6025 YC 9833.048467 1 0.0000 2789 | 5/51
50 h-m-p 0.0000 0.0001 107.1139 YC 9833.029816 1 0.0000 2844 | 5/51
51 h-m-p 0.0000 0.0006 35.8834 C 9833.026830 0 0.0000 2898 | 5/51
52 h-m-p 0.0000 0.0033 11.2952 YC 9833.026045 1 0.0000 2953 | 5/51
53 h-m-p 0.0000 0.0013 12.3186 C 9833.024719 0 0.0000 3007 | 5/51
54 h-m-p 0.0000 0.0025 12.9456 YC 9833.020816 1 0.0000 3062 | 5/51
55 h-m-p 0.0000 0.0025 35.5396 +YC 9833.007954 1 0.0000 3118 | 5/51
56 h-m-p 0.0000 0.0012 153.1617 ++YC 9832.751970 1 0.0001 3175 | 5/51
57 h-m-p 0.0000 0.0003 1614.9997 +CCCC 9830.908897 3 0.0001 3236 | 5/51
58 h-m-p 0.0000 0.0001 11396.9938 +YCCC 9825.542294 3 0.0000 3296 | 5/51
59 h-m-p 0.0000 0.0001 4691.7839 YCC 9824.738000 2 0.0000 3353 | 5/51
60 h-m-p 0.0001 0.0004 101.5109 -YC 9824.723619 1 0.0000 3409 | 5/51
61 h-m-p 0.0001 0.0334 6.7546 +++YCYCCC 9819.690901 5 0.0204 3474 | 5/51
62 h-m-p 0.0000 0.0000 7268.1878 YC 9818.279563 1 0.0000 3529 | 5/51
63 h-m-p 0.1766 0.9266 0.2316 CYCC 9815.792439 3 0.1333 3588 | 5/51
64 h-m-p 0.0691 2.7166 0.4467 +YCCC 9809.521352 3 0.6626 3694 | 5/51
65 h-m-p 0.4231 2.1153 0.2932 YCCC 9805.412222 3 1.0881 3799 | 5/51
66 h-m-p 0.6563 3.2816 0.1561 CYC 9803.860605 2 0.6634 3902 | 5/51
67 h-m-p 0.1648 2.4247 0.6283 +CCC 9802.095196 2 0.8070 4007 | 5/51
68 h-m-p 0.9180 8.0000 0.5524 CC 9801.087364 1 0.9180 4109 | 5/51
69 h-m-p 0.9888 4.9439 0.2822 CC 9800.178546 1 1.3997 4211 | 5/51
70 h-m-p 1.5686 8.0000 0.2518 YCC 9799.645450 2 1.0784 4314 | 5/51
71 h-m-p 1.6000 8.0000 0.0245 CYC 9798.631721 2 2.1796 4417 | 5/51
72 h-m-p 0.9926 8.0000 0.0538 YC 9797.577857 1 2.2011 4518 | 5/51
73 h-m-p 0.9728 4.8640 0.0482 CCCC 9796.788766 3 1.5407 4624 | 5/51
74 h-m-p 0.9132 4.5660 0.0246 YCCC 9795.935536 3 1.7285 4729 | 5/51
75 h-m-p 0.4451 7.3104 0.0954 +YYC 9795.361594 2 1.4916 4832 | 5/51
76 h-m-p 0.9064 4.5320 0.0177 CYCCC 9794.829044 4 1.8242 4939 | 5/51
77 h-m-p 0.5021 6.1264 0.0642 +YCCC 9794.232209 3 1.3735 5045 | 5/51
78 h-m-p 0.4995 2.4977 0.0671 CCCC 9793.891014 3 0.7826 5151 | 5/51
79 h-m-p 0.8285 8.0000 0.0634 CC 9793.722616 1 1.1366 5253 | 5/51
80 h-m-p 1.6000 8.0000 0.0299 YYY 9793.625782 2 1.5151 5355 | 5/51
81 h-m-p 1.6000 8.0000 0.0275 C 9793.569721 0 1.6000 5455 | 5/51
82 h-m-p 1.6000 8.0000 0.0165 YC 9793.540866 1 0.9128 5556 | 5/51
83 h-m-p 1.2391 8.0000 0.0121 CC 9793.524391 1 1.4788 5658 | 5/51
84 h-m-p 1.6000 8.0000 0.0066 CC 9793.515353 1 2.1037 5760 | 5/51
85 h-m-p 1.5181 8.0000 0.0091 CC 9793.509187 1 1.9476 5862 | 5/51
86 h-m-p 1.6000 8.0000 0.0030 CC 9793.506794 1 2.0941 5964 | 5/51
87 h-m-p 1.6000 8.0000 0.0015 YC 9793.505359 1 2.7703 6065 | 5/51
88 h-m-p 1.6000 8.0000 0.0023 C 9793.504547 0 1.7258 6165 | 5/51
89 h-m-p 1.6000 8.0000 0.0008 C 9793.504285 0 1.6901 6265 | 5/51
90 h-m-p 1.6000 8.0000 0.0006 C 9793.504096 0 2.2964 6365 | 5/51
91 h-m-p 1.6000 8.0000 0.0004 C 9793.503923 0 2.1916 6465 | 5/51
92 h-m-p 0.9439 8.0000 0.0008 +Y 9793.503761 0 2.7375 6566 | 5/51
93 h-m-p 1.6000 8.0000 0.0004 Y 9793.503603 0 3.0457 6666 | 5/51
94 h-m-p 1.6000 8.0000 0.0004 C 9793.503487 0 2.0997 6766 | 5/51
95 h-m-p 0.9929 8.0000 0.0008 Y 9793.503434 0 1.8035 6866 | 5/51
96 h-m-p 1.6000 8.0000 0.0001 Y 9793.503396 0 3.6786 6966 | 5/51
97 h-m-p 1.6000 8.0000 0.0001 +Y 9793.503319 0 4.5712 7067 | 5/51
98 h-m-p 0.9328 8.0000 0.0003 Y 9793.503253 0 2.1454 7167 | 5/51
99 h-m-p 1.6000 8.0000 0.0003 C 9793.503228 0 1.5074 7267 | 5/51
100 h-m-p 1.6000 8.0000 0.0000 Y 9793.503227 0 1.0347 7367 | 5/51
101 h-m-p 1.3136 8.0000 0.0000 C 9793.503226 0 1.1245 7467 | 5/51
102 h-m-p 1.6000 8.0000 0.0000 Y 9793.503226 0 0.7944 7567 | 5/51
103 h-m-p 0.8137 8.0000 0.0000 C 9793.503226 0 0.6873 7667 | 5/51
104 h-m-p 0.4039 8.0000 0.0000 C 9793.503226 0 0.5175 7767 | 5/51
105 h-m-p 0.3409 8.0000 0.0000 C 9793.503226 0 0.4264 7867 | 5/51
106 h-m-p 0.3517 8.0000 0.0000 C 9793.503225 0 0.3028 7967 | 5/51
107 h-m-p 0.2944 8.0000 0.0000 Y 9793.503225 0 0.2243 8067 | 5/51
108 h-m-p 0.2727 8.0000 0.0000 Y 9793.503225 0 0.1670 8167 | 5/51
109 h-m-p 0.2717 8.0000 0.0000 Y 9793.503225 0 0.1270 8267 | 5/51
110 h-m-p 0.2011 8.0000 0.0000 Y 9793.503225 0 0.0970 8367 | 5/51
111 h-m-p 0.1599 8.0000 0.0000 Y 9793.503225 0 0.0739 8467 | 5/51
112 h-m-p 0.0590 8.0000 0.0000 C 9793.503225 0 0.0590 8567 | 5/51
113 h-m-p 0.0343 8.0000 0.0000 C 9793.503225 0 0.0388 8667 | 5/51
114 h-m-p 0.0247 8.0000 0.0000 C 9793.503225 0 0.0247 8767 | 5/51
115 h-m-p 0.0229 8.0000 0.0000 C 9793.503225 0 0.0229 8867 | 5/51
116 h-m-p 0.0273 8.0000 0.0000 Y 9793.503225 0 0.0157 8967 | 5/51
117 h-m-p 0.0160 8.0000 0.0000 Y 9793.503225 0 0.0160 9067 | 5/51
118 h-m-p 0.0410 8.0000 0.0000 ---C 9793.503225 0 0.0002 9170
Out..
lnL = -9793.503225
9171 lfun, 100881 eigenQcodon, 4402080 P(t)
end of tree file.
Time used: 1:37:54
Model 8: beta&w>1
TREE # 1
(12, 16, 8, 24, (((((11, 23), (((((13, 28), 7), 27), 14), (((17, (21, 26, 4, 30, 1, 15, 19)), ((22, 10, 25), 3)), (2, 5))), 29), 9), 6), (18, 20))); MP score: 513
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
37
0.073974 0.053791 0.013558 0.052577 0.078196 0.037991 0.031072 0.017703 0.036781 0.030455 0.086478 0.080807 0.094272 0.081807 0.077933 0.095065 0.091200 0.043573 0.047113 0.042024 0.080706 0.086182 0.013751 0.060697 0.022792 0.107513 0.043286 0.038283 0.085907 0.017896 0.064800 0.085938 0.060539 0.062516 0.031435 0.098049 0.064504 0.017162 0.090481 0.068438 0.094626 0.068249 0.105319 0.011939 0.054493 0.063055 0.046404 0.014780 5.196021 0.900000 0.729627 1.811121 1.300000
ntime & nrate & np: 48 2 53
Bounds (np=53):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 4.180988
np = 53
lnL0 = -12042.249229
Iterating by ming2
Initial: fx= 12042.249229
x= 0.07397 0.05379 0.01356 0.05258 0.07820 0.03799 0.03107 0.01770 0.03678 0.03045 0.08648 0.08081 0.09427 0.08181 0.07793 0.09507 0.09120 0.04357 0.04711 0.04202 0.08071 0.08618 0.01375 0.06070 0.02279 0.10751 0.04329 0.03828 0.08591 0.01790 0.06480 0.08594 0.06054 0.06252 0.03143 0.09805 0.06450 0.01716 0.09048 0.06844 0.09463 0.06825 0.10532 0.01194 0.05449 0.06305 0.04640 0.01478 5.19602 0.90000 0.72963 1.81112 1.30000
1 h-m-p 0.0000 0.0000 6105.4563 ++ 11509.486703 m 0.0000 58 | 0/53
2 h-m-p 0.0000 0.0000 277919.0539 ++ 11403.497259 m 0.0000 114 | 0/53
3 h-m-p 0.0000 0.0000 240192.5397 +CYCYCCC 11383.886922 6 0.0000 181 | 0/53
4 h-m-p 0.0000 0.0000 221788.3548 ++ 11171.714297 m 0.0000 237 | 0/53
5 h-m-p 0.0000 0.0000 386084.5983 ++ 11046.996639 m 0.0000 293 | 0/53
6 h-m-p 0.0000 0.0000 339532.9230 ++ 11018.011876 m 0.0000 349 | 0/53
7 h-m-p 0.0000 0.0000 59007.1570
h-m-p: 8.00557579e-24 4.00278790e-23 5.90071570e+04 11018.011876
.. | 0/53
8 h-m-p 0.0000 0.0000 28320.5331 CYCYCCC 10985.739458 6 0.0000 468 | 0/53
9 h-m-p 0.0000 0.0000 5693.3251 ++ 10795.117808 m 0.0000 524 | 0/53
10 h-m-p 0.0000 0.0000 75636.3608 ++ 10731.466254 m 0.0000 580 | 1/53
11 h-m-p 0.0000 0.0000 109813.8932 ++ 10581.435881 m 0.0000 636 | 1/53
12 h-m-p 0.0000 0.0000 207736.1508 ++ 10525.305919 m 0.0000 692 | 2/53
13 h-m-p 0.0000 0.0000 680376.4585 ++ 10489.437765 m 0.0000 748 | 2/53
14 h-m-p -0.0000 -0.0000 374657.3453
h-m-p: -8.20100183e-25 -4.10050092e-24 3.74657345e+05 10489.437765
.. | 2/53
15 h-m-p 0.0000 0.0000 10588.3907 ++ 10428.395957 m 0.0000 857 | 2/53
16 h-m-p 0.0000 0.0000 8107.7048 ++ 10391.059233 m 0.0000 913 | 3/53
17 h-m-p 0.0000 0.0000 17972.9922 ++ 10310.991350 m 0.0000 969 | 4/53
18 h-m-p 0.0000 0.0000 204235.5805 ++ 10238.209711 m 0.0000 1025 | 4/53
19 h-m-p 0.0000 0.0000 83729.4541 +YYYCC 10234.558063 4 0.0000 1087 | 4/53
20 h-m-p 0.0000 0.0000 173139.9560 ++ 10156.306605 m 0.0000 1143 | 4/53
21 h-m-p 0.0000 0.0000 118197.8772 +YYCYCYC 10133.656855 6 0.0000 1208 | 4/53
22 h-m-p 0.0000 0.0000 115692.2294 ++ 10069.511418 m 0.0000 1264 | 4/53
23 h-m-p 0.0000 0.0000 79421.9030 ++ 10051.083683 m 0.0000 1320 | 5/53
24 h-m-p 0.0000 0.0000 184976.2521 +YYCCC 10043.755880 4 0.0000 1383 | 5/53
25 h-m-p 0.0000 0.0000 104555.7226 +YCYYYC 10038.185069 5 0.0000 1446 | 5/53
26 h-m-p 0.0000 0.0000 35798.0836 ++ 10026.221357 m 0.0000 1502 | 5/53
27 h-m-p 0.0000 0.0000 29021.0958 ++ 9984.395590 m 0.0000 1558 | 6/53
28 h-m-p 0.0000 0.0000 15659.6332 +YYCYCYC 9966.837786 6 0.0000 1624 | 6/53
29 h-m-p 0.0000 0.0000 27541.0733 +YYCCC 9942.729794 4 0.0000 1687 | 6/53
30 h-m-p 0.0000 0.0000 3794.9563 +YYCYYC 9935.669052 5 0.0000 1751 | 6/53
31 h-m-p 0.0000 0.0000 1952.1642 CCCC 9931.519220 3 0.0000 1813 | 6/53
32 h-m-p 0.0000 0.0000 1744.7346 CCCC 9928.196214 3 0.0000 1875 | 6/53
33 h-m-p 0.0000 0.0000 974.4277 CCCC 9927.215399 3 0.0000 1937 | 6/53
34 h-m-p 0.0000 0.0000 1343.2276 YC 9926.645313 1 0.0000 1994 | 6/53
35 h-m-p 0.0000 0.0000 920.5645 YCYC 9926.149357 3 0.0000 2054 | 6/53
36 h-m-p 0.0000 0.0001 835.7636 YYC 9925.119910 2 0.0000 2112 | 6/53
37 h-m-p 0.0000 0.0001 744.7429 YCC 9924.307901 2 0.0000 2171 | 6/53
38 h-m-p 0.0000 0.0000 1343.9872 YCYCC 9923.530601 4 0.0000 2233 | 6/53
39 h-m-p 0.0000 0.0000 1574.4102 YCCCC 9918.986218 4 0.0000 2296 | 6/53
40 h-m-p 0.0000 0.0000 10260.2958 CCC 9915.371979 2 0.0000 2356 | 6/53
41 h-m-p 0.0000 0.0000 8170.0845 YCCCC 9905.810648 4 0.0000 2419 | 6/53
42 h-m-p 0.0000 0.0000 7524.8288 +YYCCC 9894.788077 4 0.0000 2482 | 6/53
43 h-m-p 0.0000 0.0000 12809.7101 ++ 9887.845465 m 0.0000 2538 | 6/53
44 h-m-p 0.0000 0.0000 1163.5828
h-m-p: 0.00000000e+00 0.00000000e+00 1.16358281e+03 9887.845465
.. | 6/53
45 h-m-p 0.0000 0.0000 17947.0169 YYYCCC 9860.307547 5 0.0000 2654 | 6/53
46 h-m-p 0.0000 0.0000 3101.0093 +CYYYC 9850.699753 4 0.0000 2716 | 6/53
47 h-m-p 0.0000 0.0000 15896.1946 +YYYYYC 9846.813499 5 0.0000 2778 | 6/53
48 h-m-p 0.0000 0.0000 68525.2561 +YYCCC 9844.596204 4 0.0000 2841 | 6/53
49 h-m-p 0.0000 0.0000 5679.0738 ++ 9838.021360 m 0.0000 2897 | 6/53
50 h-m-p 0.0000 0.0000 191612.8384 YCCC 9830.388842 3 0.0000 2958 | 6/53
51 h-m-p 0.0000 0.0000 4867.6484 +CYCCC 9816.035700 4 0.0000 3022 | 5/53
52 h-m-p 0.0000 0.0000 12941.4778 YCYC 9814.299932 3 0.0000 3082 | 5/53
53 h-m-p 0.0000 0.0000 2815.4108 YCYCC 9813.497932 4 0.0000 3144 | 5/53
54 h-m-p 0.0000 0.0000 1282.2910 +YCYC 9812.761871 3 0.0000 3205 | 5/53
55 h-m-p 0.0000 0.0000 2372.3378 +YCCC 9810.348376 3 0.0000 3267 | 5/53
56 h-m-p 0.0000 0.0000 1191.4630 CCC 9809.004840 2 0.0000 3327 | 5/53
57 h-m-p 0.0000 0.0000 962.4545 CCCC 9808.572863 3 0.0000 3389 | 5/53
58 h-m-p 0.0000 0.0000 464.1352 CCC 9808.428804 2 0.0000 3449 | 5/53
59 h-m-p 0.0000 0.0000 380.5743 YC 9808.353572 1 0.0000 3506 | 5/53
60 h-m-p 0.0000 0.0001 235.2592 YC 9808.278181 1 0.0000 3563 | 5/53
61 h-m-p 0.0000 0.0000 303.0893 YC 9808.230155 1 0.0000 3620 | 5/53
62 h-m-p 0.0000 0.0001 370.3532 YC 9808.161439 1 0.0000 3677 | 5/53
63 h-m-p 0.0000 0.0000 434.8444 YYC 9808.075180 2 0.0000 3735 | 5/53
64 h-m-p 0.0000 0.0000 1075.4805 YCC 9807.869542 2 0.0000 3794 | 5/53
65 h-m-p 0.0000 0.0001 1044.8054 CC 9807.506485 1 0.0000 3852 | 5/53
66 h-m-p 0.0000 0.0001 1094.9577 CC 9807.152340 1 0.0000 3910 | 5/53
67 h-m-p 0.0000 0.0000 933.5021 CYC 9806.966483 2 0.0000 3969 | 5/53
68 h-m-p 0.0000 0.0001 590.9927 YC 9806.843157 1 0.0000 4026 | 5/53
69 h-m-p 0.0000 0.0002 436.1069 YCC 9806.600313 2 0.0000 4085 | 5/53
70 h-m-p 0.0000 0.0001 1349.2245 YC 9805.755548 1 0.0000 4142 | 5/53
71 h-m-p 0.0000 0.0001 5877.9244 CCCC 9803.278854 3 0.0000 4204 | 5/53
72 h-m-p 0.0000 0.0000 9592.6494 CCCC 9801.264745 3 0.0000 4266 | 5/53
73 h-m-p 0.0000 0.0001 3601.2691 YYC 9799.934563 2 0.0000 4324 | 5/53
74 h-m-p 0.0000 0.0001 1604.4999 CCC 9799.599694 2 0.0000 4384 | 5/53
75 h-m-p 0.0000 0.0001 838.5503 YC 9799.427360 1 0.0000 4441 | 5/53
76 h-m-p 0.0000 0.0002 125.8606 YC 9799.412076 1 0.0000 4498 | 5/53
77 h-m-p 0.0000 0.0010 22.8920 C 9799.410287 0 0.0000 4554 | 5/53
78 h-m-p 0.0000 0.0080 8.6035 Y 9799.409724 0 0.0000 4610 | 5/53
79 h-m-p 0.0000 0.0062 20.3489 ++YC 9799.398972 1 0.0001 4669 | 5/53
80 h-m-p 0.0000 0.0069 357.5543 ++CCC 9799.027643 2 0.0003 4731 | 5/53
81 h-m-p 0.0000 0.0003 8676.3800 +YCC 9797.834873 2 0.0000 4791 | 5/53
82 h-m-p 0.0000 0.0001 2561.8713 CC 9797.748040 1 0.0000 4849 | 5/53
83 h-m-p 0.0001 0.0005 301.7200 -CC 9797.740793 1 0.0000 4908 | 5/53
84 h-m-p 0.0005 0.0095 4.0023 -C 9797.740513 0 0.0000 4965 | 5/53
85 h-m-p 0.0001 0.0554 5.2871 +YC 9797.722732 1 0.0011 5023 | 5/53
86 h-m-p 0.0000 0.0025 587.3272 +++CCC 9796.492880 2 0.0007 5086 | 5/53
87 h-m-p 0.0000 0.0001 4743.8200 CC 9796.355199 1 0.0000 5144 | 5/53
88 h-m-p 0.0007 0.0034 14.0413 --C 9796.354769 0 0.0000 5202 | 5/53
89 h-m-p 0.0001 0.0341 1.1994 C 9796.353738 0 0.0001 5258 | 5/53
90 h-m-p 0.0001 0.0376 9.8663 +++CCC 9795.863670 2 0.0050 5321 | 5/53
91 h-m-p 0.0000 0.0001 4880.0084 +CCCC 9793.661197 3 0.0000 5384 | 5/53
92 h-m-p 0.0000 0.0002 906.2679 C 9793.585049 0 0.0000 5440 | 5/53
93 h-m-p 0.0569 1.7374 0.1361 ++YYC 9792.721273 2 0.7089 5500 | 5/53
94 h-m-p 0.6736 3.3682 0.1255 YCCC 9792.356280 3 1.2431 5609 | 5/53
95 h-m-p 0.2608 1.3042 0.2067 CCC 9792.234950 2 0.3072 5717 | 5/53
96 h-m-p 0.3011 5.7040 0.2109 +YYC 9791.964079 2 1.2045 5824 | 5/53
97 h-m-p 0.6280 4.2359 0.4045 C 9791.802159 0 0.6297 5928 | 5/53
98 h-m-p 1.5061 8.0000 0.1691 CCC 9791.599432 2 1.3595 6036 | 5/53
99 h-m-p 0.8166 4.0828 0.2116 YYC 9791.537062 2 0.6922 6142 | 5/53
100 h-m-p 0.8900 8.0000 0.1645 CYC 9791.460244 2 1.0288 6249 | 5/53
101 h-m-p 1.1533 8.0000 0.1468 CCC 9791.396778 2 1.6162 6357 | 5/53
102 h-m-p 1.6000 8.0000 0.1152 YC 9791.361556 1 0.8047 6462 | 5/53
103 h-m-p 0.6410 8.0000 0.1446 CC 9791.339604 1 0.9257 6568 | 5/53
104 h-m-p 1.3937 8.0000 0.0960 CCC 9791.315654 2 2.2527 6676 | 5/53
105 h-m-p 1.2715 8.0000 0.1701 YCC 9791.293832 2 0.9415 6783 | 5/53
106 h-m-p 0.7311 8.0000 0.2191 CCC 9791.271780 2 1.0806 6891 | 5/53
107 h-m-p 1.6000 8.0000 0.0091 CC 9791.262729 1 1.4369 6997 | 5/53
108 h-m-p 0.1803 8.0000 0.0728 +YC 9791.256237 1 1.4726 7103 | 5/53
109 h-m-p 1.6000 8.0000 0.0167 C 9791.251312 0 1.7756 7207 | 5/53
110 h-m-p 0.7794 8.0000 0.0381 YC 9791.248901 1 1.8591 7312 | 5/53
111 h-m-p 1.6000 8.0000 0.0096 YC 9791.245412 1 2.7047 7417 | 5/53
112 h-m-p 1.6000 8.0000 0.0114 C 9791.242185 0 1.8476 7521 | 5/53
113 h-m-p 0.8900 8.0000 0.0237 YC 9791.240973 1 1.6256 7626 | 5/53
114 h-m-p 1.6000 8.0000 0.0221 C 9791.239593 0 2.0879 7730 | 5/53
115 h-m-p 1.6000 8.0000 0.0167 Y 9791.239358 0 1.1046 7834 | 5/53
116 h-m-p 1.6000 8.0000 0.0038 C 9791.239293 0 1.6984 7938 | 5/53
117 h-m-p 1.3335 8.0000 0.0048 Y 9791.239187 0 2.9065 8042 | 5/53
118 h-m-p 1.6000 8.0000 0.0024 Y 9791.239033 0 3.0010 8146 | 5/53
119 h-m-p 1.6000 8.0000 0.0003 Y 9791.238758 0 3.2230 8250 | 5/53
120 h-m-p 0.3702 8.0000 0.0023 +C 9791.238677 0 1.5759 8355 | 5/53
121 h-m-p 1.6000 8.0000 0.0009 C 9791.238658 0 1.4822 8459 | 5/53
122 h-m-p 1.6000 8.0000 0.0006 C 9791.238655 0 1.8970 8563 | 5/53
123 h-m-p 1.6000 8.0000 0.0005 -C 9791.238655 0 0.1000 8668 | 5/53
124 h-m-p 0.1109 8.0000 0.0004 --Y 9791.238655 0 0.0017 8774 | 5/53
125 h-m-p 0.0160 8.0000 0.0010 C 9791.238655 0 0.0199 8878 | 5/53
126 h-m-p 0.0440 8.0000 0.0005 Y 9791.238655 0 0.0220 8982 | 5/53
127 h-m-p 0.0243 8.0000 0.0004 -Y 9791.238655 0 0.0010 9087 | 5/53
128 h-m-p 0.0160 8.0000 0.0008 Y 9791.238655 0 0.0160 9191 | 5/53
129 h-m-p 0.0418 8.0000 0.0003 --------------.. | 5/53
130 h-m-p 0.0000 0.0073 0.7563 -------- | 5/53
131 h-m-p 0.0000 0.0073 0.7563 --------
Out..
lnL = -9791.238655
9528 lfun, 114336 eigenQcodon, 5030784 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -9800.241286 S = -9391.531006 -446.914063
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 407 patterns 2:41:27
did 20 / 407 patterns 2:41:27
did 30 / 407 patterns 2:41:27
did 40 / 407 patterns 2:41:27
did 50 / 407 patterns 2:41:27
did 60 / 407 patterns 2:41:28
did 70 / 407 patterns 2:41:28
did 80 / 407 patterns 2:41:28
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did 100 / 407 patterns 2:41:28
did 110 / 407 patterns 2:41:29
did 120 / 407 patterns 2:41:29
did 130 / 407 patterns 2:41:29
did 140 / 407 patterns 2:41:29
did 150 / 407 patterns 2:41:29
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did 170 / 407 patterns 2:41:30
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did 220 / 407 patterns 2:41:31
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did 250 / 407 patterns 2:41:31
did 260 / 407 patterns 2:41:31
did 270 / 407 patterns 2:41:32
did 280 / 407 patterns 2:41:32
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did 300 / 407 patterns 2:41:32
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did 320 / 407 patterns 2:41:33
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did 370 / 407 patterns 2:41:34
did 380 / 407 patterns 2:41:34
did 390 / 407 patterns 2:41:34
did 400 / 407 patterns 2:41:34
did 407 / 407 patterns 2:41:34end of tree file.
Time used: 2:41:35
The loglikelihoods for models M1, M2, M7 and M8 are -9792.772830 -9791.660893 -9793.503225 -9791.238655 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAIGNRIKVTGGWDDVVEYINVAI
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAI
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAI
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV GDVKFSDEVSVRTIDLVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAI
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAI
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAI
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAI
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAI
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAI
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAI
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAI
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USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDE
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPID-----
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGDE
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDE
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDE
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV EVLKDHIDVPKYYIYDDEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGDE
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV EVLKDHIEVPKYYIYDEEGGTDPNLPVMVSQWPLSDDTLSQDLLDVEVVTDAPIDSEGDE
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLIDVEVITDAPVDFEGDE
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGDE
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGDE
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDE
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVITDAPVDFEGDE
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV EVLKDHIEVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDSEGDE
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDE
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDE
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVITDAPVDFEGDE
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMFSQWPLNDDTISQDLLDVEVVTDAPIDFEGDE
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTLLQDLLDVEVVTDAPVDFEGDE
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDE
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGAE
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDE
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGDE
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVITDAPIDFEGDE
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVITDAPVDFEGDE
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGDE
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDE
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTTSQDLLDVEVVTDAPIDSEGDE
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV EVLKDHIEVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDSEGDE
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLTVMVSQWPLNDDTISQDLLDVEIVTDAPIDFEGDE
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV EVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDLEGDE
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USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV VDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV --SSDPDKVADVANSEPEDDGPNVAPEPNVESEVEEVAATLSFIEDTPSTVTKDPFAFDF
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV VDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV VDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV VDSSDPDKVADVANSEPEDDGPNVAPEPNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV VDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV VDSSEPEKVADVANSEPEDDGLNVAPEINVGSEVEEVAATLSFIKDTSSTVTKDPFAFDF
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV VDSSDPDKVADVANSEPEDDGLNVAPETNVESGVEEVAATLSFIKDTPSTVTKDPFAFDF
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV VDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV VDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV VDSSDPDKVSDVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV VDSSEPDKVADVANSEPEDDGLNVAPETNVESGVEEVAATLSFIKDTPSTVTKDPFAFDF
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV VDSSEPEKVADVANSETEAD--------DVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV VDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV VDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV VDSSDPDKVADVANSEPEDDGLNVAPETNVESGVEEVAATLSFIKDTPSTVTKDPFAFDF
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV VDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV VDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV VDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV VDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV VDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV VDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV VDSSDPDKVADVANSELEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV VDSSDPDKVADVANSEPEDDGLNVAPEINVESGVEEVAATLSFIKDTPSTVTKDPFAFDF
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV VDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV VDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV VDSSDPDKVADVVNSEPEDGVLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV VDSSEPEKVADVANSETEAD--------DVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV VDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV VDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDF
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PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV VSYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV VSYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGILDDPAMELFSAGRVGPMVRKCYESQKAILG
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGILDDPAMELFSAGRVGPMVRKCYELQKAILG
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPVMELFSAGRVGPMVRKCYESQKAILG
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMGLFSAGRVGPMVRKCYESQKAILG
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV VSYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV ASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILG
.*****************************:***.* **************** ******
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYDGCAFRMTPTLEPFPYGACAQCAQ
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLESFPYGACAQCAQ
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV SLGDVSACLECLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYDGCAFRMTPTLEPFPYGACAQCAQ
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV SLGDVSACLESLTKDLHTLKIICSVVCGCGTGERTYEGCAFRMTPTLEPFPYGACAQCAQ
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYDGCAFRMTPTLEPFPYGACAQCAQ
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYDGCAFRMTPTLEPFPYGACAQCAQ
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV SLGDVSACLESLTRDIHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV SLGDVSACLESLTKNLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV SLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQ
**********.**:::***** ************ *:***********.***********
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTAISLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPFCAAAFIGKDSGHYVTNFYDAAMAIDGYG
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPFCAAAFIGKDSGHYVTNFYDAAMAIDGYG
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTVISLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPFCAAAFIGKDSGHYVTNFYDAAMAIDGYG
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPFCAAAFIGKDSGHYVTNFYDAAMAIDGYG
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPFCAAAFIGKDSGHYVTNFYDAAMAIDGYG
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV VLMHTFKSIVGTGIFCRDTTVISLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV VLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYG
********************.:*********:****************************
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV RHQIKYDTLNTICVKDVNWTASFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYRNVDFYQGDFSDLVKLPCD
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKLFYSYKNVDFYQGDFSNLVKLPCD
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFNDLVRLPCD
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV RHQIKYDTLNTICVKDANWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFGDLVKLPCD
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVESVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPSVLDVAPVLKPVVKPFYSYKNVDFYQGDFSDLVKLPCD
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFNDLVRLPCD
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV RHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCD
****************.****. * ** .**:**** ****:*********.:**:****
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQTCSNDYIKAHGPIKVGRGVMLDALGLKVFNV
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLDALGLKVFNV
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV FVVNAANESLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLDALGLKVFNV
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV FVVNAANESLSHGGGIAKAIDVHTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGILQKCSNDYIKAYGPIKVGRGVMLDALGLKVFNV
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGSIKVGRGVMLEALGLKVFNV
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV FVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNV
********.*************:***:**.********:*.*********:*********
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLSCVGDRHCKCF
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGIALTPLVSVGIFSVPLEESLSAFLACVGDRHCKCF
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGGRHCKCF
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDHHCKCF
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV VGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCF
*************************:*****:*****************:***.:*****
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQDDVQQVSQKPVLPNFEPFRIEGAHAFY
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKEALVDTIPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTIPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKEVLVDTIPVQEDVQQVSQEPVLPNFEPFRIEGAHAFY
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDVLVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNSEPFRIEGAHAFY
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV CYSDKEREAIINYMDGLVDAIFKEVLVDTIPVQEDVQQVSQEPVLPNFEPFRIEGAHAFY
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFY
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV CYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHVFY
***********************:.**** ***:*******:***** *********.**
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLNFCSVGKCLNSVTGGALLEAINVFKKSNKTVPAGNCV
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV ECNPEGLNSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLETINVFKKSNKTVPAGNCV
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV ECNPEGLMSLGADKLVLFTNSTLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV ECNPEGLYSLGVDKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV ECNPEGLMSLGADKLVLFTNSTLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV ECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCV
******* ***.*********.*:*********.********:*****************
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVL
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVL
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVL
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVL
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV TFECADMIFITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVL
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV TFECADMISITMVVLPFDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVV
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV TFECADMISITMVVLPSDGDANYEKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVL
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVV
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVV
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVL
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVV
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVV
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV TFECADMVSITMVVLPSDGDANYDKNYARAVVKVSKLKGKLVLAVGDATLYSKLSHLSVL
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV TFECADMIFITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVV
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVL
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVV
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV TFECADMISITMVVLPPDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVL
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVV
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVL
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVV
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVL
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVL
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLVVGDATLYSKLSHLSVV
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVV
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVL
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKIKGKLLLAVGDAMLYSKLSHLSVL
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV TFECADMISITMVVLPADGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVV
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV TFECADMVSITMVVLPSDGDANYDKNYARAVVKVSKLKGKLVLAVGDATLYSKLSHLSVL
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV TFECADMISITMVVLPADGDANYDKNYARAVVKVSKLKGKLLLVVGDATLYSKLSHLSVI
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV TFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVL
*******: ******* ******:************:****:*.**** **********:
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV GFVSTPDDVDRFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAIKVESTVTYGQQIGPCLVNDTVVTDNKPV
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV GFISTPGDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPV
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV GFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPV
**:***.**:********************::****************************
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV VADVVAKVVPSANWNSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHILDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV VADVVAKVVPSANWDSHYGFAKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV VADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTC
**************:***** ******:********************************
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGGVAMFVHWLYWLIGVDKGQPSDSENALNMLSKYIV
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLIGVDKGQPSDSENALNMLSKYIV
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWHTGVDKGQPSDSENALNMLSKYIV
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV LQLQFARFRFKSVGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV LQLQFARFRFKSAGLEAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV LQLQFARFRFKSAGIQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV LQLQFARFRFQSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV LQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIV
**********:*.*::*********.********** **********************
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV SAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGFNYIDKVVVVKGTTIV
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV SAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV SAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV SAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV SAGSVIIERVTHDGCCCSKRVVTAPVVNASVLKLGFEDGLCPHGLNYIDKVVVVKGTTIV
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV SAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV SAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV SAGSVTIERVTHDGCCCSKRVVTAPVVNASILKLGVEDGLCPHGLNYIDKVVVVKGTTIV
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV SAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEEGLCPHGLNYIDKVVVVKGTTIV
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV SAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGFCPHGLNYIDKVVVVKGTTIV
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV SAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV SAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV PAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIV
.**** ************************:****.*:*:****:***************
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPV
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPV
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPV
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPV
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVIDHDTGMVHDGDVFLPGDLNVSPV
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPV
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV VNVGKPVVAPSHLFLKGISYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPV
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHGTGMVHDGDAFVPGDLNVSPV
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPV
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNCVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPV
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPV
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPV
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPV
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVYDGDAFVPGDLNVSPV
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHGTGMVHDGDAFVPGDLNVSPV
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPV
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV VNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPV
*****************:********** *.*****:**.****:***.*:*********
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV TNIVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV TNIVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV TNVVISEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV TNVVISEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDLMSRNLITVFLYILSIL
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFFFGDFMSRNLITVFLYILSIL
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV TNVVISEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV TNVVISEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV TNIVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFFFGDFMSRNLITVFLYILSIL
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV TNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSIL
**:*:********************************** ***:****************
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILHKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGVILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV GLCFRAFRKGDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFRLKLYWFKVLGKFSLGIYA
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIVLRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV GLCFRAVRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGVYA
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV GLCFRAFRKGDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV GLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYA
******.** *************::*:**************:***************:**
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV LYALLFMTIRFTPIGSPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVVCKVCLYGYQELSDFSHTQV
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYHELSDFSHTQV
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV LYALLFMTIRFTPIGSPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV LYALLFMTIRFTPIGIPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKDEYCNSVICKVCLYGYQELSDFSHTQV
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV LYALLFMTIRFTPIGSPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV LYALLFMTIRFTPIGSPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV LYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQV
*************** *****************:******:********:**********
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQL
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQL
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQF
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFICQYLNILGVFLGLQQSIWFLQL
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFSQL
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFICQYLNILGVFLGLQQSIWFLQL
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNTLGVFLGLQQSIWFLQL
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQL
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFICQYLNILGVYLGLQQSIWFLQL
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQL
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQL
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFICQYLNILGVFLGLQQSIWFLQL
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQL
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNTLGVFLGLQQSIWFLQL
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQL
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV VWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQL
************************************** :*** ***:********* *:
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVHTIFQGTSKSF
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFFGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSRSARLKRVPVQTIFQGTSKSF
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSRSARLKRVPVQTIFQGTSKSF
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKVSCVACSKSARLKRVPVQTIFQGTSKSF
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSRSARLKRVPVQTIFQGTSKSF
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSRSARLKRVPVQTIFQGTSKSF
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPIQTIFQGTSKSF
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKVSCVACSKSARLKRVPVQTIFQGTSKSF
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV VPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSF
***************************:****.******:********::**********
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV YVYANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV YVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKV
**:*********************************************************
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNANQVKNACV
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKEALKNCSIITDFIVFNNNGSNVNQVKNACV
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV EFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKEALKNCGIITDFIVFNNNGSNVNQVKNACV
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKEALKNCSIITDFIVFNNNGSNVNQVKNACV
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV EFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACV
************************.******:****.**************.********
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV YFSQMLCKPVKLVDSALSASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV YFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGF
***************** ******************************************
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKFPVHDIATCMRVGAKIVNHN
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMAFNNFTTSYAKPEEKFPVHDIATCMRVGAKIVNHN
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKFPVHDIATCMRVGAKIVNHN
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV DDVPLDTFNVAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV DDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHN
*********.***************:**************:*******************
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV VLVKDSIPVVWLVRDFIVLSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV VLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKK
*****************.******************************************
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV GA
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV GA
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV GA
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV GA
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV GA
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV GA
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV GA
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV GA
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV GA
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV GA
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV GA
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV GA
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV GA
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV GA
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV GA
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV GA
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV GA
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV GA
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV GA
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV GA
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV GA
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV GA
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV GA
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV GA
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV GA
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV GA
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV GA
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV GA
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV GA
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV GA
**
>USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTTCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTGGAAGTTGTTACTGATGCACCAATTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCTTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGACAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCACTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGACGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCATGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCTAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGCCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTGTCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCATTATCTTAACATACTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAACAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCTGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTATTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTGGAAGTTGTTACTGATGCACCAATTGAC---------------------TCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAACCAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCTTTTATTGAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAATAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCATCTTTTGTCCCAGACGTTGAACCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTATCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCGCTTGTTGATACTACTCCTGTCCAGGACGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCACGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGAATTTTTGTAGCGTTGGTAAGTGTCTTAACAGTGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGGTGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTATTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGACCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTATCTCCTGTTACAAATATTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCATAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTATCTTAACATTCTTGGTGTGTTTTTGGGCCTACAGCAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTTTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTATGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGTTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATTTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGTCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATTGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAATGTTGCCATTGAGGTTCTTAAAGATCACATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTTGAAGTTGTTACTGATGCGCCAGTTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGACGTGGCTAACTCTGAGCCTGAGGATGACGGTCTTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGATGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCTTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCACTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGACGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCATGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGAATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGTTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCTAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGCCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTGTCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTTTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTATCTTAACATACTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAACAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCTGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTTCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTGGAAGTTGTTACTGATGCACCAATTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCTTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGACAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCACTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGACGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCATGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCTAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGCCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTGTCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCTGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCATTATCTTAACATACTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAACAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCTGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGCATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTGGAAGTTGTTACTGATGCACCAATTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAACCAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCTTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCGCTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTTTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATACTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCGGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTATTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTTCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTATCTCCTGTTACAAATATTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGACCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTATCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTTTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCATACTATTTTTCAGGGTACTAGCAAATCCTTCTATGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCACATCGATGTGCCTAAGTACTACATCTATGATGATGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTTGAAGTTGTTACTGATGCGCCAGTTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGACGTGGCTAACTCTGAGCCTGAGGATGATGGTCTTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAAGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCTTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGATTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCGCTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGACATGATTTCTATTACTATGGTAGTATTGCCATTTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGGTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCTACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTTCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTATTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTCAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCTTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTCAATGTATCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGCTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTATCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAATCACTTAAAAATTGTAGTATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGATGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAGGATCATATTGAAGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAACCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAGTGATGACACGCTCTCACAGGACCTGCTTGATGTGGAAGTTGTTACGGATGCACCAATTGATTCCGAGGGTGATGAAGTAGACTCCTCTGAACCTGAGAAGGTGGCAGATGTGGCTAACTCTGAACCTGAGGATGATGGTCTTAATGTGGCTCCTGAAATAAATGTAGGGTCTGAGGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACATCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGTAAGCTATGGAGGACTTAAAGTTTTAAGACAATCTCATAACAACTGTTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATTTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTTTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAATCGTTTCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGCATTGTTGGCACCGGCATCTTTTGCCGAGATACTACTGCTATCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACCAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACCATTTGTGTTAAAGACGTGAATTGGACAGCACCTTTTGTCCCTGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCATGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCAAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTTCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGAGGCGCTTGTTGATACTATTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCCTTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGAAAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTCACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCATACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTTTTAATTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTCAATGTATCTCCTGTTACAAATGTTGTTGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGATGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTCATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGAGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTGTTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTTTTCAAGCTAAAGCTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTAGCCCTGTTTGCGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTCTCTGACTTCTCTCACACACAGGTTGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTACCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATCTGGTTTTTGCAGTTTGTGCCTTTTGATGTCTTTGGCGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCTTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTATTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGCAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTCGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGCTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACTAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACATTTATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATTGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAATGTTGCCATTGAGGTTCTTAAAGATCACATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGATTGATGTTGAAGTTATTACTGATGCGCCAGTTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGACGTGGCTAACTCTGAGCCTGAGGATGACGGTCTTAATGTAGCTCCTGAAACAAATGTAGAGTCTGGAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTTTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCTTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGATTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCATGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGGCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCGCTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGACATGATTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCATCTCAGCGTAGTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTCACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTTCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTATTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCTTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTCAATGTATCTCCTGTTACAAATGTTGTCATCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAATAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTGCCAGTACCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAGGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAATCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTATGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCACACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCTGGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTTGAAGTTGTTACTGATGCGCCAGTTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGACGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAAGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTACGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTGTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAGGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGACGTGCTCAAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGATGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCTATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCGCTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGACATGATTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGGTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTCACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTTCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTATTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTCAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTCAATGTATCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACGCCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTATCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTCGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTTGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAATCACTTAAAAATTGTAGTATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTTATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATTGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAATGTTGCCATTGAGGTTCTTAAAGATCACATCGATGTGCCTAAGTACTATATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTTGAAGTTGTTACTGATGCGCCAGTTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGACGTGGCTAACTCTGAGCCTGAGGATGACGGTCTTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGATGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCTTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGATTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCACTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGACGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCATGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCTAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGCCGGCCATTATACTGTTATTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTTTACCAGGTGATCTCAATGTGTCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTGTTTGTAAGGTTTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTATCTTAACATACTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAACAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCTGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGATGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGACGTGGAAGTTGTTACTGATGCACCAATTGATTTCGAGGGTGATGAAGTAGACTCCTCAGACCCTGATAAGGTGTCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACATTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCCTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACCAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGCGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGACGTTTATACCAAGGGCATGCTGCAGAAGTGCTCAAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGATGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTATTGCTCTTACACCTTTGGTTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCCATTTTCAAAGATGCGCTTGTTGATACTATTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCAGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGACATGATTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGGTAGGTTTCGTATCCACACCTGATGATGTGGATCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTCACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAATGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCCATGTTTGTGCATTGGTTGTATTGGCTTACTGGTGTCGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTTCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTATTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTCAATGTATCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTGTCGGACTTCTCTCACACACAGGTAGTATGGCAACATCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTACCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTTCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAATCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAACCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGCTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATTGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAATGTTGCCATTGAGGTTCTTAAAGATCACATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTTGAAGTTATTACTGATGCGCCAGTTGATTTCGAGGGTGATGAAGTAGACTCCTCTGAACCTGATAAGGTGGCAGACGTGGCTAACTCTGAGCCTGAGGATGACGGTCTTAATGTAGCTCCTGAAACAAATGTAGAGTCTGGAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAAGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTTTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACTTTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTAACCTTGTTAAACTTCCATGTGATTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCATGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGGCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGTTTGGTAGATGCTATTTTCAAAGATGCGCTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGACATGATTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCATCTCAGCGTGGTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTCACTGAGGATACACGTAGTGTTAAGGCTATTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTTCTGCTGGTTCTGTCATTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTATTGAAGCTTGGCTTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTATTTCTTACACAACATTTCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTCAATGTATCTCCTGTTACAAATGTTGTCATCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATCTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAATAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCATGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTGCCAGTACCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAGGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTATATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAATCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATTTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTATGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCACACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGATGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCACATTGAGGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGACCTGCTCGATGTGGAAGTTGTTACGGATGCACCAATTGATTCCGAGGGTGATGAAGTAGACTCCTCTGAACCTGAGAAGGTGGCAGATGTGGCTAACTCTGAAACTGAGGCTGAT------------------------GATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACTTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGTAAGCTATGGAGGACTTAAAGTTTTAAGACAATCTCATAACAACTGTTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATTTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTTTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGCCGAGATACTACTGTTATCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACCAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACCATTTGTGTTAAAGACGTGAATTGGACAGCACCTTTTGTCCCTGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCATTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAATGACCTTGTTAGACTTCCATGTGACTTTGTTGTCAATGCTGCAAATGAGAATTTGTCTCATGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCAAATGATTATATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGAGGTGCTTGTTGACACTATTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAGAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATCGAAGGCGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGAACTCCTTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGGTTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTTGTCAAGGTATCTAAGCTTAAAGGCAAGTTAGTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGACGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTCACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTTTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGGCACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTTAATGTATCCCCTGTTACAAATGTTGTTGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGCTAGACACTATGAATTATGCATCGGAAAGATTCTTTTTCTTTGGTGATTTCATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGGGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTTTTCAAGCTAAAGCTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTAGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTCTCGGACTTCTCCCATACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTCTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTACCTTAACACTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGCGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGTATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATCTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTTTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAACGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAGGCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGCTATGATGTCCTCTTGACTGACATGTCATTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAATTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACATTTATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATTGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTGGAAGTTGTTACTGATGCACCAATTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCTACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACTGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGGGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAGTTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGCTGCAGAAGTGCTCAAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGATGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCGCTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGACATGATTTTTATTACTATGGTAGTATTGCCATCTGATGGCGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGGTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTCACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGCTAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGACGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTTCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTATTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATCGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTCAATGTATCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGAGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGCGTCTTTTTCAAGCTAAAGCTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTATCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTCTCTGACTTTTCTCACACCCAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTTATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTCTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTACCTTAACATTCTTGGTGTATTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGCGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTTCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATCTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTCGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTATGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACATTTATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTTCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTGGAAGTTGTTACTGATGCACCAATTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCTTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGACAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCACTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGACGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCATGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCTAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGCCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTGTCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCATTATCTTAACATACTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAACAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCTGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATTGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAATGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTTGAAGTTATTACCGATGCGCCAGTTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGACGTGGCTAACTCTGAGCCTGAGGATGACGGTCTTAATGTAGCTCCTGAAACAAATGTAGAGTCTGGAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTGCAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTTTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCTTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGATTTTGTTGTTAATGCTGCAAATGAGAGTTTGTCTCATGGTGGCGGCATAGCAAAGGCCATTGATGTTCATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGGCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCCATTTTCAAAGATGCTCTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCCTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGACATGATTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGATAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCATCTCAGCGTGGTGGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTCACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTTCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTTACTGCACCAGTTGTGAATGCTAGCGTATTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCTTACACAACATTCCTAGATAATGGTAACTGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTCAATGTATCTCCTGTTACAAATGTTGTCATCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTCTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTCTTCAGGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGGATGAGTATTGCAATAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTGCCAGTACCTTAACATTCTTGGTGTGTATTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAGGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGGCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAATCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTATGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCACACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTTCCCGTAATGTTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTGGAAGTTGTTACTGATGCACCAATTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCTTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCTTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGACAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTTAAAGATGCACTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCACCTGACGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCTATGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTTAAGTCAGTAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCTAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGCCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTGTCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTATCTTAACATACTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCCTCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAACAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTTAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCTGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGCATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCACATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGCTTTTACAGGATCTGCTTGATGTTGAAGTTGTTACTGATGCGCCAGTTGATTTCGAAGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCTTAATGTGGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGACACACCTTCCACAGTTACTAAGGATCCCTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAATTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCCTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATTTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGCTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCTTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTGGTGACCTTGTTAAACTTCCATGTGATTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCTATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCGCTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAATAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGACATGATTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGGTGGGTTTCATATCCACACCTGGTGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGACAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCTGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTTCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCATATTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCCTATACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCGGGTGATCTCAATGTATCTCCTGTCACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTTTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTTCAGTACCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTTTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAACGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAATCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAACCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTTCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTGGAAGTTGTTACTGATGCACCAATTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCTTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGACAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCACTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGACGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCATGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCTAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGCCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTGTCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCATTATCTTAACATACTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAACAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCTGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV GGTGATGTCAAATTCTCAGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCACATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTCGATGTTGAAGTTGTTACTGATGCGCCAGTTGATTTCGAGGGTGCTGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGACGTGGCTAACTCTGAGCCTGAGGATGATGGTCTTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGACACACCTTCCACAGTTACTAAGGATCCCTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCCTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTTACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTATCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTACCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTTTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGTCTGTATTGGAGCCTGTTGTCAAACCTTTCTATTCTTATAAGAATGTTGATTTTTATCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGATTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCATGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGTTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGTGCTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGACATGATTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGATAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGGTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTCACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTAGAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCCATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTCGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTTCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTATTGAAGCTTGGCGTCGAGGAGGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCTTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTCAATGTATCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACATCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTACCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTTCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAAGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAATCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAACCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCGCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTTCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTGGAAGTTGTTACTGATGCACCAATTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCTTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGACAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCACTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGACGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCATGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCTAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGCCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTGTCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCATTATCTTAACATACTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAACAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCTGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATTGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAATGTTGCCATTGAGGTTCTTAAAGATCACATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTTGAAGTTGTTACTGATGCGCCAGTTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGACGTGGCTAACTCTGAGCCTGAGGATGACGGTCTTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGATGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTTTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCACCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCTTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGATTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGGTCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCACTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAACCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGACGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCATGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTATACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCTAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGCCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTGTCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTACCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAACAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCTGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTTCTTGATGTGGAAGTTATTACTGATGCACCAATTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCTTGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATTCTGCAGAAGTGCTCAAATGATTACATTAAAGCATACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGATGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTAATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCACCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCGCTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGACATGATTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGTTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGGTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTCACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTTCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTATTGAAGCTTGGCGTCGAGGATGGTTTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTCAATGTATCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCTGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTACCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAATCACTTAAAAATTGTAGTATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATTGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAATGTTGCCATTGAGGTTCTTAAAGATCACATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTTGAAGTTATTACTGATGCGCCAGTTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGACGTGGCTAACTCTGAGCCTGAGGATGACGGTCTTAATGTAGCTCCTGAAATAAATGTAGAGTCTGGAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTTTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCTTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGATTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCATGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGGCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCGCTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGACATGATTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCATCTCAGCGTGGTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTCACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTTCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTATTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCTTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTCAATGTATCTCCTGTTACAAATGTTGTCATCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAATAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTGCCAGTACCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAGGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAATCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTATGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCACACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATTGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAATGTTGCCATTGAGGTTCTTAAAGATCACATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTTGAAGTTGTTACTGATGCGCCAGTTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGACGTGGCTAACTCTGAGCCTGAGGATGACGGTCTTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGATGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCTTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGATTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCACTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGACGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCATGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGACACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCTAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGCCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTGTCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTGTATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTATCTTAACATACTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAACAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCTGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTTCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTGGAAGTTGTTACTGATGCACCAATTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCTTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGTAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAGGGACATACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGACAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCACTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGACGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGATTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCATGTTGTATTCTAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCTAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGCCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTGTCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGCGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCACTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCATTATCTTAACATACTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGCGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAACAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCTGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTTTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAACCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCACATCGATGTGCCTAAGTACTACATTTATGATGAGGAAGGTGGCACCGATCCTAATCTTCCCGTAATGGTTTCTCAGTGGCCGCTGAATGATGACACGACCTCACAGGATCTGCTTGATGTGGAAGTTGTTACGGATGCACCAATTGACTCCGAGGGTGATGAAGTGGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGTTAACTCTGAGCCTGAGGATGGTGTTCTTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGTTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGGGCTCTTTAGTGCTGGTAGAGTCGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATTTTGGGATCTTTGGGTGATGTATCGGCTTGTCTAGAGTCTCTTACTAAGAACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGCATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACCAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACCATTTGTGTTAAAGACGTGAATTGGACAGCACCTTCTGTCCTTGACGTTGCGCCTGTATTGAAGCCTGTTGTCAAACCTTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCGCTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTCTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGTAACCCTGAAGGTTTGATGTCCTTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCACTTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCAGCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTTGTTAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTTAGCGTGGTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTCACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCTACTGTTACTTATGGACAACAAATCGGACCTTGTCTTGTTAATGACACCGTTGTTACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCAGGTGAGTTCCATATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAACGTGTTGTCACTGCACCAGTTGTTAATGCTAGCGTTTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTGGTGGCACCTTCACACCTCTTTCTCAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGTATGATGGAGATGCTTTTGTACCGGGTGACCTCAATGTATCCCCTGTTACAAATATTGTTGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCCGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTCATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCGTTCGTAAGAGAGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTTTTCAAGCTAAAGCTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTGTTTATGCATTGTATGCACTACTATTCATGACAATACGCTTTACACCTATAGGTAGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGATAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTATATGGGTACCAGGAACTCTCGGACTTCTCCCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTTTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTTCAGTATCTTAACATTCTTGGTGTGTTTTTGGGCTTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTTTTTGGCGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGTGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGTCTTAAGCGCGTTCCTATCCAGACTATCTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTCGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAGGCACTTAAAAATTGTGGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAATTAGTGGACTCAGCGTTGTCGGCCAGTTTGTCTGTTGATTTTGGTGCAAGTTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTCAATGCTGCTGTTGCTGAGGCTCATCGTTATGATGTCCTCTTGACTGACATGGCATTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAGTTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTCGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACATTTATGCTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAAAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGATGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCACATTGAGGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGACCTGCTCGATGTGGAAGTTGTTACGGATGCACCAATTGATTCCGAGGGTGATGAAGTAGACTCCTCTGAACCTGAGAAGGTGGCAGATGTGGCTAACTCTGAAACTGAGGCTGAT------------------------GATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACTTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGTAAGCTATGGAGGACTTAAAGTTTTAAGACAATCTCATAACAACTGTTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATTTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTTTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGTTATCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACCAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACCATTTGTGTTAAAGACGTGAATTGGACAGCACCTTTTGTCCCTGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCATTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAATGACCTTGTTAGACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCATGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCAAATGATTATATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGAGGTGCTTGTTGACACTATTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAGAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATCGAAGGCGCTCATGCTTTCTATGAGTGCAACCCTGAAGGTTTGTACTCCTTAGGTGTTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGGTTTCTATTACTATGGTAGTATTGCCATCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTTGTCAAGGTATCTAAGCTTAAAGGCAAGTTAGTGCTTGCTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGACGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTCACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTTTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGGCACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTTAATGTATCCCCTGTTACAAATGTTGTTGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGCTAGACACTATGAATTATGCATCGGAAAGATTCTTTTTCTTTGGTGATTTCATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGGGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTTTTCAAGCTAAAGCTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTAGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTCTCGGACTTCTCCCATACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTCTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTACCTTAACACTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGCGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGTATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATCTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTTTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAACGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAGGCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGCTATGATGTCCTCTTGACTGACATGTCATTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAATTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACATTTATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACCATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTGACCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTGGAAATTGTTACTGATGCACCAATTGATTTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCCTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGATAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGCTGCAGAAGTGCTCAAATGATTACATTAAAGCACACGGTTCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCGCTTGTTGATACTACTCCCGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGCTTTCTATGAGTGTAACCCTGAAGGTTTGATGTCCTTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCACTTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACCGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCAGCTGATGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGTTGTTGGTGATGCCACGTTGTATTCCAAGTTGTCCCACCTCAGCGTGATAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTCACTGAGGATACACGTAGTGTTAAGGCTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGACGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCCAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCCAAGTACATTGTTTCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGCTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTATTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCACACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGTCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGCTTTTGTACCGGGTGATCTCAATGTATCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACTGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGCATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCGTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTTTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCGTTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCAGTACCTTAACATTCTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATCGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAGCAAATACACTTGCAAAGAATCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTTTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGATCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGTTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCTGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCGGAAGAAACTAGGAAGTACATTATCCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA >USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV GGTGATGTCAAATTCTCTGATGAAGTCTCTGTTAGAACTATTGACCCAGTTTATAAGGTCTCCCTTGAATTTGAGTTCGAGTCTGAGACTATTATGGCTGTGCTTAATAAGGCTGTTGGTAATCGTATCAAGGTTACAGGTGGTTGGGACGATGTTGTTGAGTATATCAACGTTGCCATTGAGGTTCTTAAAGATCATATCGATGTGCCTAAGTACTACATCTATGATGAGGAAGGTGGCACCGATCCTAATCTTCCCGTAATGGTTTCTCAGTGGCCGTTGAATGATGACACGATCTCACAGGATCTGCTTGATGTGGAAGTTGTTACTGATGCACCAATTGATCTCGAGGGTGATGAAGTAGACTCCTCTGACCCTGATAAGGTGGCAGATGTGGCTAACTCTGAGCCTGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGTAGAGTCTGAAGTTGAGGAAGTTGCCGCAACCTTGTCTTTTATTAAAGATACACCTTCCACAGTTACTAAGGATCCTTTTGCTTTTGACTTTGCAAGCTATGGAGGACTTAAGGTTTTAAGACAATCTCATAACAACTGCTGGGTTACTTCTACCTTGGTGCAGCTACAATTGCTTGGCATCGTTGATGACCCTGCAATGGAGCTTTTTAGTGCTGGTAGAGTTGGTCCAATGGTTCGCAAATGCTATGAGTCACAAAAGGCTATCTTGGGATCTTTGGGTGATGTGTCGGCTTGCCTAGAGTCTCTGACTAAGGACCTACACACACTTAAGATTACCTGTTCTGTAGTCTGTGGTTGTGGTACTGGTGAACGTATCTATGAGGGTTGTGCTTTTCGTATGACGCCAACTTTGGAACCGTTCCCATATGGTGCTTGTGCTCAGTGTGCTCAAGTTTTGATGCACACTTTTAAAAGTATTGTTGGCACCGGCATCTTTTGTCGAGATACTACTGCTCTCTCCTTGGATTCTTTGGTTGTAAAACCTCTTTGTGCGGCTGCTTTTATAGGCAAGGACAGTGGTCATTATGTCACTAACTTTTATGATGCTGCTATGGCTATTGATGGTTATGGTCGTCATCAGATAAAGTATGACACACTGAACACTATTTGTGTTAAAGACGTTAATTGGACAGCACCTTTTGTCCCAGACGTTGAGCCTGTATTGGAGCCTGTTGTCAAACCGTTCTATTCTTATAAGAATGTTGATTTTTACCAAGGAGATTTTAGTGACCTTGTTAAACTTCCATGTGACTTTGTTGTTAATGCTGCAAATGAGAATTTGTCTCACGGTGGCGGCATAGCAAAGGCCATTGATGTTTATACCAAGGGCATGTTGCAGAAGTGCTCGAATGATTACATTAAAGCACACGGTCCCATTAAAGTTGGACGTGGTGTCATGTTGGAGGCATTAGGTCTTAAGGTCTTTAATGTTGTTGGTCCACGTAAGGGTAAGCATGCACCTGAGCTTCTTGTTAAGGCTTATAAGTCCGTTTTTGCTAATTCAGGTGTTGCTCTTACACCTTTGATTAGTGTTGGAATTTTTAGTGTTCCTTTGGAAGAATCTTTATCTGCTTTTCTTGCATGTGTTGGTGATCGCCACTGTAAGTGCTTTTGTTATAGTGACAAAGAGCGCGAGGCGATCATTAATTACATGGATGGCTTGGTAGATGCTATTTTCAAAGATGCACTTGTTGATACTACTCCTGTCCAGGAAGATGTTCAACAAGTTTCACAAAAACCAGTTTTGCCTAATTTTGAACCTTTCAGGATTGAAGGTGCTCATGTTTTCTATGAGTGCAACCCTGAAGGTTTGATGTCATTAGGTGCTGACAAGCTGGTGTTGTTTACAAATTCCAATTTGGATTTTTGTAGCGTTGGTAAGTGTCTTAACAATGTGACTGGCGGTGCATTGCTTGAAGCCATAAATGTATTTAAAAAGAGTAACAAAACAGTGCCTGCTGGCAACTGTGTTACTTTTGAGTGTGCAGATATGATTTCTATTACTATGGTAGTATTGCCATCTGACGGTGATGCTAATTATGACAAAAATTATGCACGCGCCGTCGTCAAGGTATCTAAGCTTAAAGGCAAGTTATTGCTTGCTGTTGGTGATGCCATGTTGTATTCCAAGTTGTCCCACCTCAGCGTGTTAGGTTTCGTATCCACACCTGATGATGTGGAGCGTTTCTACGCAAATAAGAGTGTGGTTATTAAAGTTACTGAGGATACACGTAGTGTTAAGACTGTTAAAGTAGAATCCACTGTTACTTATGGACAACAAATTGGACCTTGTCTTGTTAATGACACCGTTGTCACAGACAACAAACCTGTTGTTGCTGATGTTGTAGCTAAGGTTGTACCAAGTGCTAATTGGGATTCACATTATGGTTTTGATAAGGCTGGTGAGTTCCACATGCTAGACCATACTGGGTTTGCCTTTCCTAGTGAAGTTGTTAACGGTAGGCGTGTGCTTAAAACCACAGATAATAACTGTTGGGTTAATGTTACATGTTTACAATTACAGTTTGCTAGATTTAGGTTCAAGTCAGCAGGTCTACAGGCTATGTGGGAGTCCTATTGTACTGGTGATGTTGCTATGTTTGTGCATTGGTTGTACTGGCTTACTGGTGTTGACAAAGGTCAGCCTAGTGATTCAGAAAATGCACTTAACATGTTGTCTAAGTACATTGTTCCTGCTGGTTCTGTCACTATTGAACGTGTCACGCATGACGGTTGTTGTTGTAGTAAGCGTGTTGTCACTGCACCAGTTGTGAATGCTAGCGTGTTGAAGCTTGGCGTCGAGGATGGTCTTTGTCCACATGGTCTTAACTACATTGACAAAGTTGTTGTAGTTAAAGGTACTACAATTGTTGTCAATGTTGGAAAACCTGTAGTGGCACCATCGCACCTCTTTCTTAAGGGTGTTTCCTACACAACATTCCTAGATAATGGTAACGGTGTTGCCGGCCATTATACTGTTTTTGATCATGACACTGGTATGGTGCATGATGGAGATGTTTTTGTACCAGGTGATCTCAATGTGTCTCCTGTTACAAATGTTGTCGTCTCAGAGCAGACGGCTGTTGTGATTAAAGACCCTGTGAAGAAAGTAGAGTTAGACGCTACAAAGCTGTTAGACACTATGAATTATGCATCGGAAAGATTCTTTTCCTTTGGTGATTTTATGTCACGTAATTTAATTACAGTGTTTTTGTACATCCTTAGTATTTTGGGTCTCTGTTTTAGGGCCTTTCGTAAGAGGGATGTTAAAGTTCTAGCTGGTGTACCCCAACGTACTGGTATTATATTGCGTAAAAGTGTGCGCTATAATGCAAAGGCTTTGGGTGTCTTCTTCAAGCTAAAACTTTATTGGTTCAAAGTTCTTGGTAAGTTTAGTTTGGGTATTTATGCATTGTATGCATTACTATTCATGACAATACGCTTTACACCTATAGGTGGCCCTGTTTGTGATGATGTTGTTGCTGGTTATGCTAATTCTAGTTTTGACAAGAATGAGTATTGCAACAGTGTTATTTGTAAGGTCTGTCTCTATGGGTACCAGGAACTTTCGGACTTCTCTCACACACAGGTAGTATGGCAACACCTTAGAGACCCATTAATTGGTAATGTGATGCCTTTCTTTTATTTGGCATTTCTGGCAATTTTTGGGGGTGTTTATGTAAAGGCTATTACTCTCTATTTTATTTTCCATTATCTTAACATACTTGGTGTGTTTTTGGGCCTACAACAGTCCATTTGGTTTTTGCAGCTTGTGCCTTTTGATGTCTTTGGTGACGAGATCGTCGTCTTTTTCATCGTTACACGCGTATTGATGTTCCTTAAGCATGTTTTCCTTGGCTGCGATAAGGCATCTTGTGTGGCTTGCTCTAAGAGTGCTCGCCTTAAGCGCGTTCCTGTCCAGACTATTTTTCAGGGTACTAGCAAATCCTTCTACGTACATGCCAATGGTGGTTCTAAGTTCTGTAAGAAGCACAATTTCTTTTGTTTAAATTGTGATTCTTATGGTCCAGGCTGCACTTTTATTAATGACGTCATTGCAACTGAAGTTGGTAATGTTGTCAAACTTAATGTGCAACCGACAGGTCCTGCCACTATTCTTATTGACAAGGTTGAATTCAGTAATGGTTTTTACTATCTTTATAGTGGTGACACATTTTGGAAGTACAACTTTGACATAACAGATAACAAATACACTTGCAAAGAGTCACTTAAAAATTGTAGCATAATCACAGACTTTATTGTTTTTAACAATAATGGTTCCAATGTAAATCAGGTTAAGAATGCATGTGTGTATTTTTCACAGATGCTTTGTAAACCTGTTAAGTTAGTGGACTCAGCGTTGTTGGCCAGTTTGTCTGTTGATTTTGGTGCAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATAGTTTTGGCAAAGACCTGTCAAGTTGTAATGACATGCAGGATTGCAAGAGCACATTGGGTTTTGATGATGTACCATTGGATACCTTTAATGCTGCTGTTGCTGAGGCTCATCGTTACGATGTCCTCTTGACTGACATGTCGTTCAACAATTTTACCACCAGTTATGCAAAACCAGAGGAAAAACTTCCCGTCCATGACATTGCCACGTGTATGCGTGTAGGTGCCAAGATTGTTAATCATAACGTTCTTGTCAAGGATAGTATACCTGTGGTGTGGCTTGTACGTGATTTCATTGCCCTTTCTGAAGAAACTAGGAAGTACATTATTCGTACGACTAAAGTTAAGGGTATAACCTTCATGTTGACCTTTAATGATTGTCGTATGCATACTACCATACCTACTGTTTGCATTGCAAATAAGAAGGGTGCA
>USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDEVDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAIGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPID-------SSDPDKVADVANSEPEDDGPNVAPEPNVESEVEEVAATLSFIEDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTASFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQDDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLNFCSVGKCLNSVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGGVAMFVHWLYWLIGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNIVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILHKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIVLSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGDEVDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYDGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWNSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDEVDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDEVDSSDPDKVADVANSEPEDDGPNVAPEPNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMIFITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHILDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLIGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNIVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVHTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDDEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGDEVDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPFDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVVGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIEVPKYYIYDEEGGTDPNLPVMVSQWPLSDDTLSQDLLDVEVVTDAPIDSEGDEVDSSEPEKVADVANSEPEDDGLNVAPEINVGSEVEEVAATLSFIKDTSSTVTKDPFAFDFVSYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLESFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTAISLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLSCVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKEALVDTIPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYEKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWHTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGFNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGVILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGSPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQFVPFDVFGDEIVVFFIVTRVLMFLKHVFFGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNANQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLIDVEVITDAPVDFEGDEVDSSDPDKVADVANSEPEDDGLNVAPETNVESGVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPFCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVVGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPVTNVVISEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFICQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSRSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV GDVKFSDEVSVRTIDLVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGDEVDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLECLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYRNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQTCSNDYIKAHGPIKVGRGVMLDALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVVGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFSQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGDEVDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYDGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVIDHDTGMVHDGDVFLPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVVCKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDEVDSSDPDKVSDVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLDALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGIALTPLVSVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTIPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVVGFVSTPDDVDRFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVITDAPVDFEGDEVDSSEPDKVADVANSEPEDDGLNVAPETNVESGVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPFCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKLFYSYKNVDFYQGDFSNLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVVGFVSTPDDVERFYANKSVVIKVTEDTRSVKAIKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSAGSVIIERVTHDGCCCSKRVVTAPVVNASVLKLGFEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGISYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPVTNVVISEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDLMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYHELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFICQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSRSARLKRVPVQTIFQGTSKSFYVYANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIEVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDSEGDEVDSSEPEKVADVANSETEAD--------DVESEVEEVAATLSFIKDTPSTVTKDPFAFDFVSYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTVISLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFNDLVRLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKEVLVDTIPVQEDVQQVSQEPVLPNFEPFRIEGAHAFYECNPEGLNSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMVSITMVVLPSDGDANYDKNYARAVVKVSKLKGKLVLAVGDATLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHGTGMVHDGDAFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFFFGDFMSRNLITVFLYILSILGLCFRAFRKGDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGSPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNTLGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKVSCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKEALKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKFPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDEVDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANESLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLDALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMIFITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVVGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFAKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGIPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDEVDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVITDAPVDFEGDEVDSSDPDKVADVANSEPEDDGLNVAPETNVESGVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPFCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANESLSHGGGIAKAIDVHTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVVGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNCVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPVTNVVISEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFRLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKDEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFICQYLNILGVYLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSRSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMFSQWPLNDDTISQDLLDVEVVTDAPIDFEGDEVDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPPDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSVGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTLLQDLLDVEVVTDAPVDFEGDEVDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGILDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDANWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFGDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVVGFISTPGDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSAGSVTIERVTHDGCCCSKRVVTAPVVNASILKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDEVDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGAEVDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGILDDPAMELFSAGRVGPMVRKCYELQKAILGSLGDVSACLESLTKDLHTLKIICSVVCGCGTGERTYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPFCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVESVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDVLVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVVGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLEAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEEGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDEVDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGDEVDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYDGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGGRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLETINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGIQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVITDAPIDFEGDEVDSSDPDKVADVANSELEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGILQKCSNDYIKAYGPIKVGRGVMLDALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDHHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLVVGDATLYSKLSHLSVVGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGFCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVITDAPVDFEGDEVDSSDPDKVADVANSEPEDDGLNVAPEINVESGVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPFCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVVGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPVTNVVISEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFICQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSRSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNCIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPVDFEGDEVDSSDPDKVADVANSEPEDDGLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYDGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIVLRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDFEGDEVDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPVMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTRDIHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKIKGKLLLAVGDAMLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTTSQDLLDVEVVTDAPIDSEGDEVDSSDPDKVADVVNSEPEDGVLNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMGLFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKNLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPSVLDVAPVLKPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNSEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSTLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPADGDANYDKNYARAVVKVSKLKGKLLLAVGDATLYSKLSHLSVVGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVYDGDAFVPGDLNVSPVTNIVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAVRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGVYALYALLFMTIRFTPIGSPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPIQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKEALKNCGIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALSASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMAFNNFTTSYAKPEEKFPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV GDVKFSDEVSVKTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIEVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDSEGDEVDSSEPEKVADVANSETEAD--------DVESEVEEVAATLSFIKDTPSTVTKDPFAFDFVSYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTVISLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFNDLVRLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKEVLVDTIPVQEDVQQVSQEPVLPNFEPFRIEGAHAFYECNPEGLYSLGVDKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMVSITMVVLPSDGDANYDKNYARAVVKVSKLKGKLVLAVGDATLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHGTGMVHDGDAFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFFFGDFMSRNLITVFLYILSILGLCFRAFRKGDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGSPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNTLGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKVSCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKEALKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKFPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLTVMVSQWPLNDDTISQDLLDVEIVTDAPIDFEGDEVDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGSIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHAFYECNPEGLMSLGADKLVLFTNSTLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPADGDANYDKNYARAVVKVSKLKGKLLLVVGDATLYSKLSHLSVIGFVSTPDDVERFYANKSVVIKVTEDTRSVKAVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFQSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVSAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVVGHYTVFDHDTGMVHDGDAFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFQYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDSKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNVAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA >USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV GDVKFSDEVSVRTIDPVYKVSLEFEFESETIMAVLNKAVGNRIKVTGGWDDVVEYINVAIEVLKDHIDVPKYYIYDEEGGTDPNLPVMVSQWPLNDDTISQDLLDVEVVTDAPIDLEGDEVDSSDPDKVADVANSEPEDDGPNVAPETNVESEVEEVAATLSFIKDTPSTVTKDPFAFDFASYGGLKVLRQSHNNCWVTSTLVQLQLLGIVDDPAMELFSAGRVGPMVRKCYESQKAILGSLGDVSACLESLTKDLHTLKITCSVVCGCGTGERIYEGCAFRMTPTLEPFPYGACAQCAQVLMHTFKSIVGTGIFCRDTTALSLDSLVVKPLCAAAFIGKDSGHYVTNFYDAAMAIDGYGRHQIKYDTLNTICVKDVNWTAPFVPDVEPVLEPVVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDGLVDAIFKDALVDTTPVQEDVQQVSQKPVLPNFEPFRIEGAHVFYECNPEGLMSLGADKLVLFTNSNLDFCSVGKCLNNVTGGALLEAINVFKKSNKTVPAGNCVTFECADMISITMVVLPSDGDANYDKNYARAVVKVSKLKGKLLLAVGDAMLYSKLSHLSVLGFVSTPDDVERFYANKSVVIKVTEDTRSVKTVKVESTVTYGQQIGPCLVNDTVVTDNKPVVADVVAKVVPSANWDSHYGFDKAGEFHMLDHTGFAFPSEVVNGRRVLKTTDNNCWVNVTCLQLQFARFRFKSAGLQAMWESYCTGDVAMFVHWLYWLTGVDKGQPSDSENALNMLSKYIVPAGSVTIERVTHDGCCCSKRVVTAPVVNASVLKLGVEDGLCPHGLNYIDKVVVVKGTTIVVNVGKPVVAPSHLFLKGVSYTTFLDNGNGVAGHYTVFDHDTGMVHDGDVFVPGDLNVSPVTNVVVSEQTAVVIKDPVKKVELDATKLLDTMNYASERFFSFGDFMSRNLITVFLYILSILGLCFRAFRKRDVKVLAGVPQRTGIILRKSVRYNAKALGVFFKLKLYWFKVLGKFSLGIYALYALLFMTIRFTPIGGPVCDDVVAGYANSSFDKNEYCNSVICKVCLYGYQELSDFSHTQVVWQHLRDPLIGNVMPFFYLAFLAIFGGVYVKAITLYFIFHYLNILGVFLGLQQSIWFLQLVPFDVFGDEIVVFFIVTRVLMFLKHVFLGCDKASCVACSKSARLKRVPVQTIFQGTSKSFYVHANGGSKFCKKHNFFCLNCDSYGPGCTFINDVIATEVGNVVKLNVQPTGPATILIDKVEFSNGFYYLYSGDTFWKYNFDITDNKYTCKESLKNCSIITDFIVFNNNGSNVNQVKNACVYFSQMLCKPVKLVDSALLASLSVDFGASLHSAFVSVLSNSFGKDLSSCNDMQDCKSTLGFDDVPLDTFNAAVAEAHRYDVLLTDMSFNNFTTSYAKPEEKLPVHDIATCMRVGAKIVNHNVLVKDSIPVVWLVRDFIALSEETRKYIIRTTKVKGITFMLTFNDCRMHTTIPTVCIANKKGA
Reading sequence file /data//pss_subsets/LZW_nsp1_VIPR_ALG4_672096717_2978_7843_1_2012_02_China_Unknown_PEDV.result/original_alignment/codeml/fasta/LZW_nsp1_VIPR_ALG4_672096717_2978_7843_1_2012_02_China_Unknown_PEDV.result.1
Found 30 sequences of length 4866
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 1.2%
Found 169 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0% 83.5%100.0%
Using a window size of 80 with k as 3
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 270 polymorphic sites
**p-Value(s)**
----------
NSS: 4.00e-03 (1000 permutations)
Max Chi^2: 3.30e-02 (1000 permutations)
PHI (Permutation): 1.00e-03 (1000 permutations)
PHI (Normal): 1.45e-03
#NEXUS
[ID: 1132902276]
begin taxa;
dimensions ntax=30;
taxlabels
PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV
CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV
JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV
KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV
PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV
CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV
USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV
KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV
CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV
OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV
ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV
USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV
PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV
USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV
USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV
PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV
CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV
GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV
CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV
USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV
GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV
USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV
T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV
USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV
PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV
GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV
PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV
KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV
GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV
UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV
;
end;
begin trees;
translate
1 PEDV_1873_2_Segovia_nsp1_VIPR_ALG4_QKV43786_1_2982_7847_1_2016_09_23_Spain_Swine_PEDV,
2 CH_SCZY44_2017_nsp1_VIPR_ALG4_AZL47203_1_2978_7843_1_2017_09_09_China_Swine_PEDV,
3 JS2008_nsp1_VIPR_ALG4_459357910_2978_7819_1_2008_China_Swine_PEDV,
4 KNU_1706_nsp1_VIPR_ALG4_AWM11479_1_2978_7843_1_2017_12_South_Korea_Swine_PEDV,
5 PEDV_2330_Orense_nsp1_VIPR_ALG4_QKV43840_1_2982_7847_1_2019_01_30_Spain_Swine_PEDV,
6 CH_TP_2_2_2018_nsp1_VIPR_ALG4_QCC26579_1_2978_7843_1_2018_China_Swine_PEDV,
7 USA_Iowa106_2013_nsp1_VIPR_ALG4_658130659_2943_7808_1_2013_12_29_USA_Swine_PEDV,
8 KMM_1_JPN_2014_nsp1_VIPR_ALG4_948549172_2920_7785_1_2014_01_Japan_Pig_PEDV,
9 CH_hubei_2016_nsp1_VIPR_ALG4_ART84249_1_2978_7843_1_2016_03_China_Swine_PEDV,
10 OH9097_14_nsp1_VIPR_ALG4_946969676_2946_7811_1_2014_10_19_USA_Swine_PEDV,
11 ISU13_19338E_IN_homogenate_nsp1_VIPR_ALG4_557844662_2978_7843_1_2013_05_16_USA_Swine_PEDV,
12 USA_Tennesse56_2013_nsp1_VIPR_ALG4_658130372_2943_7808_1_2013_11_04_USA_Swine_PEDV,
13 PEDV_1526_Zaragoza_Tauste_nsp1_VIPR_ALG4_QKV43768_1_2943_7808_1_2014_10_09_Spain_Swine_PEDV,
14 USA_Minnesota59_2013_nsp1_VIPR_ALG4_658130386_2943_7808_1_2013_11_11_USA_Swine_PEDV,
15 USA_Minnesota79_2013_nsp1_VIPR_ALG4_658130512_2943_7808_1_2013_11_30_USA_Swine_PEDV,
16 PEDV_Hjms_nsp1_VIPR_ALG4_ATG31093_1_2978_7822_1_2015_05_11_China_Swine_PEDV,
17 CH_ZJCX_1_2012_nsp1_VIPR_ALG4_661567691_2947_7812_1_2012_03_04_China_Swine_PEDV,
18 GDS07_nsp1_VIPR_ALG4_QCQ19845_1_2978_7843_1_2014_03_12_China_Swine_PEDV,
19 CH_S_nsp1_VIPR_ALG4_351630106_2978_7843_1_1986_China_Swine_PEDV,
20 USA_Oklahoma1_2015_nsp1_VIPR_ALG4_825144391_2933_7798_1_2014_12_12_USA_Swine_PEDV,
21 GDS38_nsp1_VIPR_ALG4_QCQ20007_1_2978_7843_1_2012_10_20_China_Swine_PEDV,
22 USA_Nebraska348_2014_nsp1_VIPR_ALG4_825144545_2933_7798_1_2014_02_25_USA_Swine_PEDV,
23 T10_HB2018_nsp1_VIPR_ALG4_QFG01711_1_2978_7843_1_2018_02_02_China_Swine_PEDV,
24 USA_Ohio68_2013_nsp1_VIPR_ALG4_658130442_2943_7808_1_2013_11_24_USA_Swine_PEDV,
25 PEDV_MEX_MICH_02_2013_nsp1_VIPR_ALG4_AVU05464_1_2808_7673_1_2013_07_24_Mexico_Swine_PEDV,
26 GDS22_nsp1_VIPR_ALG4_QCQ19833_1_2978_7843_1_2012_09_23_China_Swine_PEDV,
27 PEDV_1481_Pamplona_Tudela_nsp1_VIPR_ALG4_QKV43738_1_2943_7808_1_2014_06_03_Spain_Swine_PEDV,
28 KB2013_4_nsp1_VIPR_ALG4_1142619340_2978_7843_1_2013_China_Swine_PEDV,
29 GDS28_nsp1_VIPR_ALG4_QCQ19857_1_2978_7843_1_2012_12_13_China_Swine_PEDV,
30 UNKNOWN_MT843279_nsp1_VIPR_ALG4_QMU85406_1_2967_7808_1_2013_02_China_Unknown_PEDV
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:2.893106e-03,5:3.482584e-03,13:5.302280e-04,27:3.194105e-04,(((((2:4.938307e-03,26:2.286110e-03)0.598:2.903386e-04,(((((3:3.649758e-04,30:6.793573e-04)1.000:8.600958e-03,19:7.046497e-03)1.000:3.653966e-03,9:1.613558e-02)1.000:3.496259e-03,21:4.710320e-03)1.000:2.245007e-03,(((4:2.081275e-03,(8:1.362737e-04,10:1.729705e-03,11:3.291528e-04,12:7.276983e-04,14:1.348648e-04,22:1.423318e-04,24:1.323370e-04)0.951:3.425469e-04)0.987:5.629461e-04,((7:1.509525e-03,20:1.101727e-03,25:5.297391e-04)0.860:3.218337e-04,15:7.431635e-04)1.000:2.682518e-03)1.000:2.294193e-03,(16:3.776682e-03,18:1.515780e-03)1.000:1.206436e-03)1.000:3.274316e-03)0.800:5.204989e-04,29:3.958187e-03)1.000:1.065181e-03,28:3.222914e-03)0.994:1.182559e-03,17:1.989367e-03)0.741:4.221626e-04,(6:5.404408e-03,23:4.475674e-03)1.000:9.495607e-04)1.000:3.261539e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:2.893106e-03,5:3.482584e-03,13:5.302280e-04,27:3.194105e-04,(((((2:4.938307e-03,26:2.286110e-03):2.903386e-04,(((((3:3.649758e-04,30:6.793573e-04):8.600958e-03,19:7.046497e-03):3.653966e-03,9:1.613558e-02):3.496259e-03,21:4.710320e-03):2.245007e-03,(((4:2.081275e-03,(8:1.362737e-04,10:1.729705e-03,11:3.291528e-04,12:7.276983e-04,14:1.348648e-04,22:1.423318e-04,24:1.323370e-04):3.425469e-04):5.629461e-04,((7:1.509525e-03,20:1.101727e-03,25:5.297391e-04):3.218337e-04,15:7.431635e-04):2.682518e-03):2.294193e-03,(16:3.776682e-03,18:1.515780e-03):1.206436e-03):3.274316e-03):5.204989e-04,29:3.958187e-03):1.065181e-03,28:3.222914e-03):1.182559e-03,17:1.989367e-03):4.221626e-04,(6:5.404408e-03,23:4.475674e-03):9.495607e-04):3.261539e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -10230.04 -10264.37
2 -10230.06 -10258.41
--------------------------------------
TOTAL -10230.05 -10263.68
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.118643 0.000047 0.104942 0.131673 0.118511 1279.32 1357.44 1.001
r(A<->C){all} 0.076314 0.000189 0.050922 0.103996 0.075602 948.91 998.37 1.001
r(A<->G){all} 0.222771 0.000474 0.183554 0.268110 0.221507 838.04 858.09 1.000
r(A<->T){all} 0.023826 0.000037 0.013240 0.036373 0.023271 999.50 1040.33 1.000
r(C<->G){all} 0.011610 0.000037 0.001383 0.022895 0.010618 705.95 712.37 1.000
r(C<->T){all} 0.576935 0.000633 0.527310 0.624378 0.577893 886.11 908.48 1.001
r(G<->T){all} 0.088544 0.000130 0.065747 0.110589 0.088096 984.99 1042.93 1.000
pi(A){all} 0.245752 0.000038 0.233702 0.257669 0.245550 690.01 869.77 1.000
pi(C){all} 0.172734 0.000027 0.162896 0.183139 0.172551 1053.81 1105.18 1.000
pi(G){all} 0.230572 0.000037 0.219431 0.243365 0.230578 846.88 916.09 1.000
pi(T){all} 0.350942 0.000046 0.337638 0.364155 0.350899 851.31 977.12 1.000
alpha{1,2} 0.474109 0.055085 0.131803 0.985916 0.429355 860.13 992.73 1.000
alpha{3} 1.671603 0.905650 0.343346 3.569141 1.450952 691.23 709.12 1.000
pinvar{all} 0.576425 0.006802 0.407885 0.716311 0.592711 566.36 684.03 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/LZW_nsp1_VIPR_ALG4_672096717_2978_7843_1_2012_02_China_Unknown_PEDV.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 30 ls = 1607
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 68 68 68 68 70 69 | Ser TCT 32 31 31 33 29 31 | Tyr TAT 41 43 41 41 42 41 | Cys TGT 39 39 40 39 39 39
TTC 30 30 30 30 29 30 | TCC 16 17 17 16 17 16 | TAC 18 16 18 18 17 18 | TGC 13 13 13 13 13 13
Leu TTA 16 16 18 16 16 15 | TCA 14 14 14 14 14 15 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 47 48 47 47 47 46 | TCG 7 8 7 6 8 7 | TAG 0 0 0 0 0 0 | Trp TGG 14 14 14 14 14 14
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 50 49 49 50 49 49 | Pro CCT 37 36 38 37 37 37 | His CAT 22 21 20 22 22 20 | Arg CGT 20 19 19 20 19 20
CTC 8 8 8 8 8 8 | CCC 4 4 4 4 4 4 | CAC 11 12 12 11 11 12 | CGC 9 9 9 9 10 9
CTA 10 10 8 10 10 10 | CCA 19 19 19 19 19 18 | Gln CAA 15 14 15 15 15 15 | CGA 1 1 1 1 1 1
CTG 7 7 8 7 8 9 | CCG 4 4 3 4 4 4 | CAG 20 22 21 20 20 21 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 48 52 47 48 51 48 | Thr ACT 43 42 43 43 42 41 | Asn AAT 58 59 60 58 58 58 | Ser AGT 29 30 29 29 29 29
ATC 14 14 14 14 14 14 | ACC 15 15 15 15 15 16 | AAC 23 21 22 23 22 22 | AGC 8 9 8 8 9 9
ATA 13 12 13 13 13 12 | ACA 29 29 29 29 29 29 | Lys AAA 42 41 43 42 42 43 | Arg AGA 6 6 5 6 6 6
Met ATG 30 29 30 30 28 29 | ACG 6 7 6 6 7 7 | AAG 65 65 65 65 65 64 | AGG 6 6 6 6 6 6
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 103 103 105 103 104 104 | Ala GCT 52 52 52 52 52 53 | Asp GAT 70 69 69 70 73 73 | Gly GGT 76 78 76 76 76 75
GTC 31 32 31 31 31 33 | GCC 15 13 15 15 14 14 | GAC 41 41 42 41 38 39 | GGC 19 18 19 19 18 20
GTA 28 29 28 28 29 31 | GCA 34 33 33 34 32 32 | Glu GAA 26 27 26 26 26 27 | GGA 10 10 10 10 11 10
GTG 34 32 33 34 32 30 | GCG 3 4 4 3 5 6 | GAG 35 34 34 35 35 33 | GGG 3 3 3 3 3 3
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 72 69 69 67 69 69 | Ser TCT 31 31 29 31 29 31 | Tyr TAT 41 41 41 42 41 42 | Cys TGT 38 40 40 40 38 40
TTC 29 29 29 30 29 29 | TCC 19 17 18 17 18 17 | TAC 18 18 18 17 18 18 | TGC 14 14 13 13 14 14
Leu TTA 16 15 15 17 15 15 | TCA 16 15 16 14 18 15 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 48 47 46 47 46 48 | TCG 6 7 7 7 6 7 | TAG 0 0 0 0 0 0 | Trp TGG 14 14 14 14 14 14
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 44 47 49 49 48 50 | Pro CCT 37 37 36 38 36 36 | His CAT 23 21 21 20 22 21 | Arg CGT 19 19 20 19 19 19
CTC 9 8 8 8 8 8 | CCC 4 4 4 4 4 4 | CAC 10 11 11 12 10 11 | CGC 10 9 9 9 10 9
CTA 10 10 10 10 10 10 | CCA 17 18 17 19 18 18 | Gln CAA 15 15 15 15 15 15 | CGA 1 1 1 1 1 1
CTG 7 8 9 8 10 7 | CCG 4 4 5 3 5 4 | CAG 21 21 21 21 21 20 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 50 50 48 47 50 52 | Thr ACT 38 41 41 43 39 40 | Asn AAT 57 60 58 59 58 60 | Ser AGT 28 28 29 29 28 28
ATC 13 15 14 14 14 15 | ACC 16 16 16 15 16 16 | AAC 22 20 22 22 22 21 | AGC 12 10 9 8 10 10
ATA 12 12 12 13 12 12 | ACA 30 29 28 29 30 29 | Lys AAA 42 43 43 43 42 44 | Arg AGA 6 5 6 5 6 5
Met ATG 29 29 29 30 29 29 | ACG 8 7 9 6 7 7 | AAG 66 64 62 65 65 63 | AGG 5 7 7 6 6 7
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 103 103 103 107 101 101 | Ala GCT 53 53 54 52 49 53 | Asp GAT 70 71 72 71 73 71 | Gly GGT 74 74 75 76 75 75
GTC 32 32 33 30 34 31 | GCC 14 14 14 15 17 14 | GAC 36 40 40 41 40 38 | GGC 20 20 20 19 20 19
GTA 28 32 32 27 31 31 | GCA 32 32 32 33 33 32 | Glu GAA 29 26 27 26 27 27 | GGA 10 11 10 10 10 11
GTG 34 29 30 33 31 30 | GCG 5 6 5 4 5 6 | GAG 36 34 33 34 32 34 | GGG 4 4 3 3 3 4
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 71 72 68 67 72 69 | Ser TCT 27 30 32 31 31 31 | Tyr TAT 42 41 41 41 41 41 | Cys TGT 39 40 39 41 39 39
TTC 29 27 30 30 27 29 | TCC 20 18 16 17 16 18 | TAC 17 18 18 18 18 18 | TGC 13 13 13 14 13 13
Leu TTA 16 15 16 15 16 16 | TCA 15 16 14 15 14 13 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 47 46 47 47 47 47 | TCG 5 5 7 7 7 7 | TAG 0 0 0 0 0 0 | Trp TGG 14 14 14 14 14 14
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 47 48 50 48 50 52 | Pro CCT 37 36 37 36 38 37 | His CAT 22 21 22 23 21 20 | Arg CGT 19 19 20 19 19 20
CTC 8 9 8 8 8 7 | CCC 4 4 4 5 4 4 | CAC 10 11 11 10 11 12 | CGC 10 9 9 9 10 9
CTA 10 10 10 9 10 10 | CCA 18 18 19 18 19 18 | Gln CAA 15 15 15 15 15 15 | CGA 1 1 1 1 1 1
CTG 7 9 7 9 7 8 | CCG 4 5 4 4 4 4 | CAG 21 21 20 21 21 21 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 48 47 48 49 48 49 | Thr ACT 40 42 43 40 43 41 | Asn AAT 57 57 58 58 58 58 | Ser AGT 27 29 29 29 29 27
ATC 15 17 14 15 14 12 | ACC 16 15 15 17 15 16 | AAC 24 22 23 20 23 22 | AGC 11 10 8 10 8 10
ATA 12 12 13 12 13 14 | ACA 30 29 29 29 29 29 | Lys AAA 41 41 42 43 42 43 | Arg AGA 6 8 6 5 6 5
Met ATG 28 29 30 29 30 29 | ACG 8 7 6 7 6 7 | AAG 65 66 65 63 65 65 | AGG 5 4 6 8 6 6
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 102 101 103 104 102 104 | Ala GCT 53 55 52 53 53 53 | Asp GAT 67 71 70 73 70 70 | Gly GGT 73 72 76 72 76 77
GTC 33 34 31 31 31 32 | GCC 14 14 15 15 15 14 | GAC 39 40 41 39 41 40 | GGC 22 22 19 20 19 20
GTA 31 32 28 30 29 28 | GCA 32 32 34 32 32 32 | Glu GAA 29 26 26 26 26 27 | GGA 10 9 10 11 10 10
GTG 36 30 34 31 34 31 | GCG 4 5 3 5 3 6 | GAG 37 34 35 34 35 34 | GGG 4 4 3 5 3 3
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 68 70 68 68 69 69 | Ser TCT 32 30 32 31 31 31 | Tyr TAT 41 41 41 40 40 41 | Cys TGT 39 40 39 40 39 40
TTC 30 29 30 30 30 29 | TCC 16 18 16 17 18 17 | TAC 18 18 18 19 20 18 | TGC 13 12 13 13 13 14
Leu TTA 16 17 16 16 16 15 | TCA 14 15 14 14 16 15 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 47 47 47 47 45 47 | TCG 7 7 7 7 5 7 | TAG 0 0 0 0 0 0 | Trp TGG 14 14 14 14 14 14
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 50 48 50 50 50 48 | Pro CCT 37 35 37 38 35 37 | His CAT 22 22 22 19 21 21 | Arg CGT 20 20 20 19 20 19
CTC 8 9 8 7 8 8 | CCC 4 5 4 4 4 4 | CAC 11 10 11 13 11 11 | CGC 9 9 9 9 8 9
CTA 10 9 10 9 10 10 | CCA 19 18 19 19 18 18 | Gln CAA 15 16 15 15 15 15 | CGA 1 1 1 1 1 1
CTG 7 8 7 8 8 8 | CCG 4 4 4 3 5 4 | CAG 20 19 20 21 21 21 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 48 48 48 48 51 49 | Thr ACT 43 41 43 43 41 41 | Asn AAT 58 57 58 59 58 60 | Ser AGT 29 28 29 29 29 28
ATC 14 14 14 14 14 15 | ACC 15 16 15 16 16 16 | AAC 23 23 23 22 22 20 | AGC 8 10 8 8 9 10
ATA 13 12 13 13 12 12 | ACA 29 29 29 29 29 29 | Lys AAA 42 43 42 43 42 43 | Arg AGA 6 5 6 5 6 5
Met ATG 30 29 30 30 28 29 | ACG 6 7 6 6 7 7 | AAG 65 65 65 65 65 64 | AGG 6 6 6 6 6 7
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 103 102 103 105 102 103 | Ala GCT 52 51 52 52 52 53 | Asp GAT 70 71 70 70 73 71 | Gly GGT 76 75 76 77 75 74
GTC 31 34 31 31 33 32 | GCC 15 15 15 14 14 14 | GAC 41 39 41 41 39 40 | GGC 19 20 19 19 20 20
GTA 28 31 28 28 31 31 | GCA 34 32 34 33 33 32 | Glu GAA 26 27 26 26 27 26 | GGA 10 10 10 10 10 11
GTG 34 31 34 33 31 30 | GCG 3 6 3 4 5 6 | GAG 35 36 35 34 33 34 | GGG 3 3 3 3 3 4
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 68 68 67 71 69 68 | Ser TCT 31 33 29 27 29 32 | Tyr TAT 41 41 43 42 40 41 | Cys TGT 40 39 43 40 40 39
TTC 30 30 29 29 29 30 | TCC 17 15 20 20 20 16 | TAC 18 18 17 18 19 18 | TGC 13 13 9 12 12 13
Leu TTA 16 15 15 16 15 16 | TCA 14 14 13 15 15 14 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 47 47 45 47 46 47 | TCG 7 7 7 5 6 7 | TAG 0 0 0 0 0 0 | Trp TGG 14 14 14 14 14 14
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 49 49 48 47 49 50 | Pro CCT 38 37 38 37 36 37 | His CAT 20 22 20 22 21 22 | Arg CGT 19 20 20 19 20 20
CTC 8 8 10 8 8 8 | CCC 4 4 5 4 2 4 | CAC 12 11 11 10 11 11 | CGC 9 9 9 10 9 9
CTA 10 10 11 10 10 10 | CCA 19 19 16 18 17 19 | Gln CAA 15 15 15 15 15 15 | CGA 1 1 1 1 1 1
CTG 8 7 7 7 9 7 | CCG 3 4 4 4 6 4 | CAG 21 20 21 21 22 20 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 47 49 49 48 48 48 | Thr ACT 43 43 39 40 43 44 | Asn AAT 59 58 56 57 57 58 | Ser AGT 29 27 29 27 28 29
ATC 14 14 14 15 16 14 | ACC 15 15 18 16 17 14 | AAC 22 23 24 23 22 23 | AGC 8 10 9 11 10 8
ATA 12 14 12 12 13 13 | ACA 29 29 30 30 29 29 | Lys AAA 43 42 43 41 42 42 | Arg AGA 5 6 6 6 6 6
Met ATG 30 30 29 28 29 30 | ACG 6 6 8 8 6 6 | AAG 65 64 66 65 64 65 | AGG 6 7 5 5 6 6
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 105 103 108 104 103 104 | Ala GCT 52 52 52 52 52 51 | Asp GAT 70 70 70 67 72 70 | Gly GGT 76 76 75 73 75 76
GTC 31 31 28 32 33 31 | GCC 15 15 14 14 14 15 | GAC 42 41 39 39 39 41 | GGC 19 19 21 22 20 19
GTA 29 29 30 31 30 28 | GCA 33 33 36 32 33 34 | Glu GAA 26 26 26 29 27 26 | GGA 10 10 10 10 10 10
GTG 33 34 32 36 31 34 | GCG 4 3 6 4 5 3 | GAG 34 35 32 37 34 35 | GGG 3 3 4 4 3 3
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C544
position 1: T:0.22091 C:0.14748 A:0.27069 G:0.36092
position 2: T:0.33416 C:0.20535 A:0.30305 G:0.15744
position 3: T:0.49035 C:0.17113 A:0.16366 G:0.17486
Average T:0.34848 C:0.17465 A:0.24580 G:0.23107
#2: C370
position 1: T:0.22215 C:0.14624 A:0.27194 G:0.35968
position 2: T:0.33541 C:0.20411 A:0.30180 G:0.15868
position 3: T:0.49222 C:0.16926 A:0.16241 G:0.17610
Average T:0.34993 C:0.17320 A:0.24538 G:0.23149
#3: C556
position 1: T:0.22278 C:0.14561 A:0.27069 G:0.36092
position 2: T:0.33416 C:0.20535 A:0.30367 G:0.15681
position 3: T:0.48973 C:0.17237 A:0.16304 G:0.17486
Average T:0.34889 C:0.17445 A:0.24580 G:0.23086
#4: C197
position 1: T:0.22091 C:0.14748 A:0.27069 G:0.36092
position 2: T:0.33416 C:0.20535 A:0.30305 G:0.15744
position 3: T:0.49098 C:0.17113 A:0.16366 G:0.17424
Average T:0.34868 C:0.17465 A:0.24580 G:0.23086
#5: C112
position 1: T:0.22091 C:0.14748 A:0.27131 G:0.36030
position 2: T:0.33541 C:0.20411 A:0.30243 G:0.15806
position 3: T:0.49284 C:0.16801 A:0.16366 G:0.17548
Average T:0.34972 C:0.17320 A:0.24580 G:0.23128
#6: C76
position 1: T:0.22029 C:0.14748 A:0.26945 G:0.36279
position 2: T:0.33416 C:0.20535 A:0.30243 G:0.15806
position 3: T:0.48973 C:0.17237 A:0.16428 G:0.17362
Average T:0.34806 C:0.17507 A:0.24538 G:0.23149
#7: C58
position 1: T:0.22526 C:0.14375 A:0.27007 G:0.36092
position 2: T:0.33354 C:0.20535 A:0.30243 G:0.15868
position 3: T:0.48413 C:0.17299 A:0.16428 G:0.17859
Average T:0.34765 C:0.17403 A:0.24559 G:0.23273
#8: C316
position 1: T:0.22215 C:0.14499 A:0.27131 G:0.36154
position 2: T:0.33292 C:0.20597 A:0.30180 G:0.15930
position 3: T:0.48849 C:0.17237 A:0.16428 G:0.17486
Average T:0.34785 C:0.17445 A:0.24580 G:0.23190
#9: C218
position 1: T:0.22091 C:0.14686 A:0.26945 G:0.36279
position 2: T:0.33354 C:0.20597 A:0.30118 G:0.15930
position 3: T:0.48849 C:0.17299 A:0.16428 G:0.17424
Average T:0.34765 C:0.17527 A:0.24497 G:0.23211
#10: C596
position 1: T:0.22153 C:0.14686 A:0.27007 G:0.36154
position 2: T:0.33416 C:0.20535 A:0.30367 G:0.15681
position 3: T:0.49160 C:0.17050 A:0.16304 G:0.17486
Average T:0.34910 C:0.17424 A:0.24559 G:0.23107
#11: C66
position 1: T:0.22091 C:0.14748 A:0.27007 G:0.36154
position 2: T:0.33416 C:0.20535 A:0.30243 G:0.15806
position 3: T:0.48227 C:0.17673 A:0.16677 G:0.17424
Average T:0.34578 C:0.17652 A:0.24642 G:0.23128
#12: C321
position 1: T:0.22340 C:0.14499 A:0.27256 G:0.35905
position 2: T:0.33416 C:0.20473 A:0.30180 G:0.15930
position 3: T:0.49035 C:0.17050 A:0.16490 G:0.17424
Average T:0.34931 C:0.17341 A:0.24642 G:0.23086
#13: C208
position 1: T:0.22091 C:0.14499 A:0.26945 G:0.36465
position 2: T:0.33603 C:0.20348 A:0.30243 G:0.15806
position 3: T:0.47978 C:0.17735 A:0.16553 G:0.17735
Average T:0.34557 C:0.17527 A:0.24580 G:0.23335
#14: C147
position 1: T:0.22091 C:0.14686 A:0.27069 G:0.36154
position 2: T:0.33479 C:0.20597 A:0.30118 G:0.15806
position 3: T:0.48600 C:0.17610 A:0.16428 G:0.17362
Average T:0.34723 C:0.17631 A:0.24538 G:0.23107
#15: C580
position 1: T:0.22091 C:0.14748 A:0.27069 G:0.36092
position 2: T:0.33416 C:0.20535 A:0.30305 G:0.15744
position 3: T:0.49035 C:0.17113 A:0.16366 G:0.17486
Average T:0.34848 C:0.17465 A:0.24580 G:0.23107
#16: C327
position 1: T:0.22215 C:0.14624 A:0.27007 G:0.36154
position 2: T:0.33230 C:0.20597 A:0.30118 G:0.16055
position 3: T:0.48787 C:0.17299 A:0.16241 G:0.17673
Average T:0.34744 C:0.17507 A:0.24456 G:0.23294
#17: C242
position 1: T:0.22091 C:0.14810 A:0.27069 G:0.36030
position 2: T:0.33479 C:0.20473 A:0.30305 G:0.15744
position 3: T:0.49160 C:0.16988 A:0.16304 G:0.17548
Average T:0.34910 C:0.17424 A:0.24559 G:0.23107
#18: C72
position 1: T:0.22091 C:0.14810 A:0.26945 G:0.36154
position 2: T:0.33416 C:0.20535 A:0.30243 G:0.15806
position 3: T:0.49035 C:0.17175 A:0.16241 G:0.17548
Average T:0.34848 C:0.17507 A:0.24476 G:0.23169
#19: C592
position 1: T:0.22091 C:0.14748 A:0.27069 G:0.36092
position 2: T:0.33416 C:0.20535 A:0.30305 G:0.15744
position 3: T:0.49035 C:0.17113 A:0.16366 G:0.17486
Average T:0.34848 C:0.17465 A:0.24580 G:0.23107
#20: C433
position 1: T:0.22278 C:0.14499 A:0.26945 G:0.36279
position 2: T:0.33479 C:0.20473 A:0.30305 G:0.15744
position 3: T:0.48475 C:0.17486 A:0.16490 G:0.17548
Average T:0.34744 C:0.17486 A:0.24580 G:0.23190
#21: C225
position 1: T:0.22091 C:0.14748 A:0.27069 G:0.36092
position 2: T:0.33416 C:0.20535 A:0.30305 G:0.15744
position 3: T:0.49035 C:0.17113 A:0.16366 G:0.17486
Average T:0.34848 C:0.17465 A:0.24580 G:0.23107
#22: C492
position 1: T:0.22153 C:0.14624 A:0.27131 G:0.36092
position 2: T:0.33416 C:0.20535 A:0.30305 G:0.15744
position 3: T:0.49035 C:0.17237 A:0.16241 G:0.17486
Average T:0.34868 C:0.17465 A:0.24559 G:0.23107
#23: C130
position 1: T:0.22153 C:0.14624 A:0.27069 G:0.36154
position 2: T:0.33479 C:0.20473 A:0.30305 G:0.15744
position 3: T:0.48911 C:0.17362 A:0.16553 G:0.17175
Average T:0.34848 C:0.17486 A:0.24642 G:0.23024
#24: C312
position 1: T:0.22215 C:0.14561 A:0.27069 G:0.36154
position 2: T:0.33292 C:0.20597 A:0.30180 G:0.15930
position 3: T:0.48849 C:0.17237 A:0.16366 G:0.17548
Average T:0.34785 C:0.17465 A:0.24538 G:0.23211
#25: C388
position 1: T:0.22153 C:0.14686 A:0.26945 G:0.36217
position 2: T:0.33416 C:0.20535 A:0.30367 G:0.15681
position 3: T:0.48973 C:0.17237 A:0.16304 G:0.17486
Average T:0.34848 C:0.17486 A:0.24538 G:0.23128
#26: C290
position 1: T:0.22029 C:0.14686 A:0.27194 G:0.36092
position 2: T:0.33479 C:0.20473 A:0.30243 G:0.15806
position 3: T:0.48973 C:0.17175 A:0.16366 G:0.17486
Average T:0.34827 C:0.17445 A:0.24601 G:0.23128
#27: C78
position 1: T:0.21842 C:0.14686 A:0.27194 G:0.36279
position 2: T:0.33230 C:0.20846 A:0.30056 G:0.15868
position 3: T:0.48911 C:0.17237 A:0.16428 G:0.17424
Average T:0.34661 C:0.17590 A:0.24559 G:0.23190
#28: C456
position 1: T:0.22153 C:0.14499 A:0.26882 G:0.36465
position 2: T:0.33665 C:0.20286 A:0.30243 G:0.15806
position 3: T:0.48102 C:0.17610 A:0.16553 G:0.17735
Average T:0.34640 C:0.17465 A:0.24559 G:0.23335
#29: C136
position 1: T:0.22029 C:0.14686 A:0.27131 G:0.36154
position 2: T:0.33479 C:0.20535 A:0.30180 G:0.15806
position 3: T:0.48662 C:0.17486 A:0.16366 G:0.17486
Average T:0.34723 C:0.17569 A:0.24559 G:0.23149
#30: C604
position 1: T:0.22091 C:0.14748 A:0.27069 G:0.36092
position 2: T:0.33479 C:0.20473 A:0.30305 G:0.15744
position 3: T:0.49098 C:0.17050 A:0.16366 G:0.17486
Average T:0.34889 C:0.17424 A:0.24580 G:0.23107
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 2068 | Ser S TCT 919 | Tyr Y TAT 1236 | Cys C TGT 1186
TTC 881 | TCC 520 | TAC 538 | TGC 389
Leu L TTA 473 | TCA 439 | *** * TAA 0 | *** * TGA 0
TTG 1404 | TCG 200 | TAG 0 | Trp W TGG 420
------------------------------------------------------------------------------
Leu L CTT 1466 | Pro P CCT 1105 | His H CAT 638 | Arg R CGT 584
CTC 243 | CCC 121 | CAC 332 | CGC 275
CTA 296 | CCA 549 | Gln Q CAA 450 | CGA 30
CTG 233 | CCG 122 | CAG 621 | CGG 0
------------------------------------------------------------------------------
Ile I ATT 1461 | Thr T ACT 1249 | Asn N AAT 1744 | Ser S AGT 856
ATC 428 | ACC 469 | AAC 666 | AGC 276
ATA 376 | ACA 874 | Lys K AAA 1270 | Arg R AGA 172
Met M ATG 878 | ACG 203 | AAG 1941 | AGG 181
------------------------------------------------------------------------------
Val V GTT 3101 | Ala A GCT 1569 | Asp D GAT 2117 | Gly G GGT 2256
GTC 951 | GCC 435 | GAC 1199 | GGC 590
GTA 886 | GCA 985 | Glu E GAA 798 | GGA 304
GTG 971 | GCG 134 | GAG 1032 | GGG 100
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.22139 C:0.14655 A:0.27057 G:0.36150
position 2: T:0.33429 C:0.20521 A:0.30247 G:0.15804
position 3: T:0.48859 C:0.17243 A:0.16391 G:0.17507
Average T:0.34809 C:0.17473 A:0.24565 G:0.23154
Model 1: NearlyNeutral (2 categories)
TREE # 1: (12, 16, 8, 24, (((((11, 23), (((((13, 28), 7), 27), 14), (((17, (21, 26, 4, 30, 1, 15, 19)), ((22, 10, 25), 3)), (2, 5))), 29), 9), 6), (18, 20))); MP score: 513
lnL(ntime: 48 np: 51): -9792.772830 +0.000000
31..12 31..16 31..8 31..24 31..32 32..33 33..34 34..35 35..36 36..11 36..23 35..37 37..38 38..39 39..40 40..41 41..13 41..28 40..7 39..27 38..14 37..42 42..43 43..44 44..17 44..45 45..21 45..26 45..4 45..30 45..1 45..15 45..19 43..46 46..47 47..22 47..10 47..25 46..3 42..48 48..2 48..5 35..29 34..9 33..6 32..49 49..18 49..20
0.009135 0.011094 0.001300 0.000004 0.010361 0.000815 0.002625 0.003267 0.000711 0.015704 0.007170 0.001038 0.006985 0.009979 0.011511 0.027202 0.000696 0.001896 0.021142 0.050040 0.014799 0.010787 0.007086 0.001338 0.005866 0.000652 0.000004 0.005200 0.000650 0.001298 0.000004 0.000004 0.000004 0.007796 0.000643 0.004543 0.003246 0.001297 0.001951 0.002787 0.011838 0.004622 0.013141 0.010332 0.006354 0.002594 0.015794 0.013706 5.179589 0.868750 0.062039
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.341010
(12: 0.009135, 16: 0.011094, 8: 0.001300, 24: 0.000004, (((((11: 0.015704, 23: 0.007170): 0.000711, (((((13: 0.000696, 28: 0.001896): 0.027202, 7: 0.021142): 0.011511, 27: 0.050040): 0.009979, 14: 0.014799): 0.006985, (((17: 0.005866, (21: 0.000004, 26: 0.005200, 4: 0.000650, 30: 0.001298, 1: 0.000004, 15: 0.000004, 19: 0.000004): 0.000652): 0.001338, ((22: 0.004543, 10: 0.003246, 25: 0.001297): 0.000643, 3: 0.001951): 0.007796): 0.007086, (2: 0.011838, 5: 0.004622): 0.002787): 0.010787): 0.001038, 29: 0.013141): 0.003267, 9: 0.010332): 0.002625, 6: 0.006354): 0.000815, (18: 0.015794, 20: 0.013706): 0.002594): 0.010361);
(C321: 0.009135, C327: 0.011094, C316: 0.001300, C312: 0.000004, (((((C66: 0.015704, C130: 0.007170): 0.000711, (((((C208: 0.000696, C456: 0.001896): 0.027202, C58: 0.021142): 0.011511, C78: 0.050040): 0.009979, C147: 0.014799): 0.006985, (((C242: 0.005866, (C225: 0.000004, C290: 0.005200, C197: 0.000650, C604: 0.001298, C544: 0.000004, C580: 0.000004, C592: 0.000004): 0.000652): 0.001338, ((C492: 0.004543, C596: 0.003246, C388: 0.001297): 0.000643, C556: 0.001951): 0.007796): 0.007086, (C370: 0.011838, C112: 0.004622): 0.002787): 0.010787): 0.001038, C136: 0.013141): 0.003267, C218: 0.010332): 0.002625, C76: 0.006354): 0.000815, (C72: 0.015794, C433: 0.013706): 0.002594): 0.010361);
Detailed output identifying parameters
kappa (ts/tv) = 5.17959
MLEs of dN/dS (w) for site classes (K=2)
p: 0.86875 0.13125
w: 0.06204 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.009 3664.9 1156.1 0.1851 0.0015 0.0080 5.4 9.2
31..16 0.011 3664.9 1156.1 0.1851 0.0018 0.0097 6.6 11.2
31..8 0.001 3664.9 1156.1 0.1851 0.0002 0.0011 0.8 1.3
31..24 0.000 3664.9 1156.1 0.1851 0.0000 0.0000 0.0 0.0
31..32 0.010 3664.9 1156.1 0.1851 0.0017 0.0091 6.2 10.5
32..33 0.001 3664.9 1156.1 0.1851 0.0001 0.0007 0.5 0.8
33..34 0.003 3664.9 1156.1 0.1851 0.0004 0.0023 1.6 2.7
34..35 0.003 3664.9 1156.1 0.1851 0.0005 0.0029 1.9 3.3
35..36 0.001 3664.9 1156.1 0.1851 0.0001 0.0006 0.4 0.7
36..11 0.016 3664.9 1156.1 0.1851 0.0025 0.0138 9.3 15.9
36..23 0.007 3664.9 1156.1 0.1851 0.0012 0.0063 4.3 7.3
35..37 0.001 3664.9 1156.1 0.1851 0.0002 0.0009 0.6 1.1
37..38 0.007 3664.9 1156.1 0.1851 0.0011 0.0061 4.2 7.1
38..39 0.010 3664.9 1156.1 0.1851 0.0016 0.0087 5.9 10.1
39..40 0.012 3664.9 1156.1 0.1851 0.0019 0.0101 6.8 11.7
40..41 0.027 3664.9 1156.1 0.1851 0.0044 0.0238 16.2 27.5
41..13 0.001 3664.9 1156.1 0.1851 0.0001 0.0006 0.4 0.7
41..28 0.002 3664.9 1156.1 0.1851 0.0003 0.0017 1.1 1.9
40..7 0.021 3664.9 1156.1 0.1851 0.0034 0.0185 12.6 21.4
39..27 0.050 3664.9 1156.1 0.1851 0.0081 0.0438 29.7 50.7
38..14 0.015 3664.9 1156.1 0.1851 0.0024 0.0130 8.8 15.0
37..42 0.011 3664.9 1156.1 0.1851 0.0017 0.0094 6.4 10.9
42..43 0.007 3664.9 1156.1 0.1851 0.0011 0.0062 4.2 7.2
43..44 0.001 3664.9 1156.1 0.1851 0.0002 0.0012 0.8 1.4
44..17 0.006 3664.9 1156.1 0.1851 0.0010 0.0051 3.5 5.9
44..45 0.001 3664.9 1156.1 0.1851 0.0001 0.0006 0.4 0.7
45..21 0.000 3664.9 1156.1 0.1851 0.0000 0.0000 0.0 0.0
45..26 0.005 3664.9 1156.1 0.1851 0.0008 0.0046 3.1 5.3
45..4 0.001 3664.9 1156.1 0.1851 0.0001 0.0006 0.4 0.7
45..30 0.001 3664.9 1156.1 0.1851 0.0002 0.0011 0.8 1.3
45..1 0.000 3664.9 1156.1 0.1851 0.0000 0.0000 0.0 0.0
45..15 0.000 3664.9 1156.1 0.1851 0.0000 0.0000 0.0 0.0
45..19 0.000 3664.9 1156.1 0.1851 0.0000 0.0000 0.0 0.0
43..46 0.008 3664.9 1156.1 0.1851 0.0013 0.0068 4.6 7.9
46..47 0.001 3664.9 1156.1 0.1851 0.0001 0.0006 0.4 0.7
47..22 0.005 3664.9 1156.1 0.1851 0.0007 0.0040 2.7 4.6
47..10 0.003 3664.9 1156.1 0.1851 0.0005 0.0028 1.9 3.3
47..25 0.001 3664.9 1156.1 0.1851 0.0002 0.0011 0.8 1.3
46..3 0.002 3664.9 1156.1 0.1851 0.0003 0.0017 1.2 2.0
42..48 0.003 3664.9 1156.1 0.1851 0.0005 0.0024 1.7 2.8
48..2 0.012 3664.9 1156.1 0.1851 0.0019 0.0104 7.0 12.0
48..5 0.005 3664.9 1156.1 0.1851 0.0007 0.0040 2.7 4.7
35..29 0.013 3664.9 1156.1 0.1851 0.0021 0.0115 7.8 13.3
34..9 0.010 3664.9 1156.1 0.1851 0.0017 0.0091 6.1 10.5
33..6 0.006 3664.9 1156.1 0.1851 0.0010 0.0056 3.8 6.4
32..49 0.003 3664.9 1156.1 0.1851 0.0004 0.0023 1.5 2.6
49..18 0.016 3664.9 1156.1 0.1851 0.0026 0.0138 9.4 16.0
49..20 0.014 3664.9 1156.1 0.1851 0.0022 0.0120 8.1 13.9
Time used: 18:18
Model 2: PositiveSelection (3 categories)
TREE # 1: (12, 16, 8, 24, (((((11, 23), (((((13, 28), 7), 27), 14), (((17, (21, 26, 4, 30, 1, 15, 19)), ((22, 10, 25), 3)), (2, 5))), 29), 9), 6), (18, 20))); MP score: 513
lnL(ntime: 48 np: 53): -9791.660893 +0.000000
31..12 31..16 31..8 31..24 31..32 32..33 33..34 34..35 35..36 36..11 36..23 35..37 37..38 38..39 39..40 40..41 41..13 41..28 40..7 39..27 38..14 37..42 42..43 43..44 44..17 44..45 45..21 45..26 45..4 45..30 45..1 45..15 45..19 43..46 46..47 47..22 47..10 47..25 46..3 42..48 48..2 48..5 35..29 34..9 33..6 32..49 49..18 49..20
0.009198 0.011164 0.001306 0.000004 0.010455 0.000792 0.002651 0.003293 0.000662 0.015852 0.007262 0.001049 0.007041 0.010037 0.011624 0.027420 0.000702 0.001909 0.021323 0.050509 0.014901 0.010879 0.007142 0.001349 0.005912 0.000657 0.000004 0.005240 0.000655 0.001307 0.000004 0.000004 0.000004 0.007854 0.000647 0.004576 0.003270 0.001305 0.001966 0.002811 0.011933 0.004658 0.013236 0.010406 0.006409 0.002630 0.015914 0.013809 5.226410 0.898736 0.093649 0.080901 3.769257
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.343738
(12: 0.009198, 16: 0.011164, 8: 0.001306, 24: 0.000004, (((((11: 0.015852, 23: 0.007262): 0.000662, (((((13: 0.000702, 28: 0.001909): 0.027420, 7: 0.021323): 0.011624, 27: 0.050509): 0.010037, 14: 0.014901): 0.007041, (((17: 0.005912, (21: 0.000004, 26: 0.005240, 4: 0.000655, 30: 0.001307, 1: 0.000004, 15: 0.000004, 19: 0.000004): 0.000657): 0.001349, ((22: 0.004576, 10: 0.003270, 25: 0.001305): 0.000647, 3: 0.001966): 0.007854): 0.007142, (2: 0.011933, 5: 0.004658): 0.002811): 0.010879): 0.001049, 29: 0.013236): 0.003293, 9: 0.010406): 0.002651, 6: 0.006409): 0.000792, (18: 0.015914, 20: 0.013809): 0.002630): 0.010455);
(C321: 0.009198, C327: 0.011164, C316: 0.001306, C312: 0.000004, (((((C66: 0.015852, C130: 0.007262): 0.000662, (((((C208: 0.000702, C456: 0.001909): 0.027420, C58: 0.021323): 0.011624, C78: 0.050509): 0.010037, C147: 0.014901): 0.007041, (((C242: 0.005912, (C225: 0.000004, C290: 0.005240, C197: 0.000655, C604: 0.001307, C544: 0.000004, C580: 0.000004, C592: 0.000004): 0.000657): 0.001349, ((C492: 0.004576, C596: 0.003270, C388: 0.001305): 0.000647, C556: 0.001966): 0.007854): 0.007142, (C370: 0.011933, C112: 0.004658): 0.002811): 0.010879): 0.001049, C136: 0.013236): 0.003293, C218: 0.010406): 0.002651, C76: 0.006409): 0.000792, (C72: 0.015914, C433: 0.013809): 0.002630): 0.010455);
Detailed output identifying parameters
kappa (ts/tv) = 5.22641
MLEs of dN/dS (w) for site classes (K=3)
p: 0.89874 0.09365 0.00761
w: 0.08090 1.00000 3.76926
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.009 3663.8 1157.2 0.1951 0.0015 0.0079 5.6 9.1
31..16 0.011 3663.8 1157.2 0.1951 0.0019 0.0096 6.8 11.1
31..8 0.001 3663.8 1157.2 0.1951 0.0002 0.0011 0.8 1.3
31..24 0.000 3663.8 1157.2 0.1951 0.0000 0.0000 0.0 0.0
31..32 0.010 3663.8 1157.2 0.1951 0.0018 0.0090 6.4 10.4
32..33 0.001 3663.8 1157.2 0.1951 0.0001 0.0007 0.5 0.8
33..34 0.003 3663.8 1157.2 0.1951 0.0004 0.0023 1.6 2.6
34..35 0.003 3663.8 1157.2 0.1951 0.0006 0.0028 2.0 3.3
35..36 0.001 3663.8 1157.2 0.1951 0.0001 0.0006 0.4 0.7
36..11 0.016 3663.8 1157.2 0.1951 0.0027 0.0136 9.7 15.7
36..23 0.007 3663.8 1157.2 0.1951 0.0012 0.0062 4.5 7.2
35..37 0.001 3663.8 1157.2 0.1951 0.0002 0.0009 0.6 1.0
37..38 0.007 3663.8 1157.2 0.1951 0.0012 0.0060 4.3 7.0
38..39 0.010 3663.8 1157.2 0.1951 0.0017 0.0086 6.2 10.0
39..40 0.012 3663.8 1157.2 0.1951 0.0019 0.0100 7.1 11.5
40..41 0.027 3663.8 1157.2 0.1951 0.0046 0.0235 16.8 27.2
41..13 0.001 3663.8 1157.2 0.1951 0.0001 0.0006 0.4 0.7
41..28 0.002 3663.8 1157.2 0.1951 0.0003 0.0016 1.2 1.9
40..7 0.021 3663.8 1157.2 0.1951 0.0036 0.0183 13.1 21.2
39..27 0.051 3663.8 1157.2 0.1951 0.0085 0.0434 31.0 50.2
38..14 0.015 3663.8 1157.2 0.1951 0.0025 0.0128 9.1 14.8
37..42 0.011 3663.8 1157.2 0.1951 0.0018 0.0093 6.7 10.8
42..43 0.007 3663.8 1157.2 0.1951 0.0012 0.0061 4.4 7.1
43..44 0.001 3663.8 1157.2 0.1951 0.0002 0.0012 0.8 1.3
44..17 0.006 3663.8 1157.2 0.1951 0.0010 0.0051 3.6 5.9
44..45 0.001 3663.8 1157.2 0.1951 0.0001 0.0006 0.4 0.7
45..21 0.000 3663.8 1157.2 0.1951 0.0000 0.0000 0.0 0.0
45..26 0.005 3663.8 1157.2 0.1951 0.0009 0.0045 3.2 5.2
45..4 0.001 3663.8 1157.2 0.1951 0.0001 0.0006 0.4 0.7
45..30 0.001 3663.8 1157.2 0.1951 0.0002 0.0011 0.8 1.3
45..1 0.000 3663.8 1157.2 0.1951 0.0000 0.0000 0.0 0.0
45..15 0.000 3663.8 1157.2 0.1951 0.0000 0.0000 0.0 0.0
45..19 0.000 3663.8 1157.2 0.1951 0.0000 0.0000 0.0 0.0
43..46 0.008 3663.8 1157.2 0.1951 0.0013 0.0067 4.8 7.8
46..47 0.001 3663.8 1157.2 0.1951 0.0001 0.0006 0.4 0.6
47..22 0.005 3663.8 1157.2 0.1951 0.0008 0.0039 2.8 4.5
47..10 0.003 3663.8 1157.2 0.1951 0.0005 0.0028 2.0 3.2
47..25 0.001 3663.8 1157.2 0.1951 0.0002 0.0011 0.8 1.3
46..3 0.002 3663.8 1157.2 0.1951 0.0003 0.0017 1.2 2.0
42..48 0.003 3663.8 1157.2 0.1951 0.0005 0.0024 1.7 2.8
48..2 0.012 3663.8 1157.2 0.1951 0.0020 0.0102 7.3 11.9
48..5 0.005 3663.8 1157.2 0.1951 0.0008 0.0040 2.9 4.6
35..29 0.013 3663.8 1157.2 0.1951 0.0022 0.0114 8.1 13.1
34..9 0.010 3663.8 1157.2 0.1951 0.0017 0.0089 6.4 10.3
33..6 0.006 3663.8 1157.2 0.1951 0.0011 0.0055 3.9 6.4
32..49 0.003 3663.8 1157.2 0.1951 0.0004 0.0023 1.6 2.6
49..18 0.016 3663.8 1157.2 0.1951 0.0027 0.0137 9.8 15.8
49..20 0.014 3663.8 1157.2 0.1951 0.0023 0.0119 8.5 13.7
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C544)
Pr(w>1) post mean +- SE for w
12 R 0.625 2.728
99 I 0.584 2.616
456 E 0.529 2.461
662 S 0.680 2.883
705 L 0.644 2.781
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C544)
Pr(w>1) post mean +- SE for w
12 R 0.634 1.328 +- 0.273
42 R 0.607 1.313 +- 0.274
99 I 0.628 1.324 +- 0.273
118 D 0.526 1.254 +- 0.312
456 E 0.619 1.319 +- 0.274
550 A 0.528 1.255 +- 0.311
593 M 0.600 1.309 +- 0.274
662 S 0.677 1.350 +- 0.266
705 L 0.638 1.329 +- 0.273
1141 G 0.537 1.261 +- 0.309
1397 S 0.551 1.271 +- 0.306
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 0.997 0.003 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.985 0.015 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.335
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.662 0.003
sum of density on p0-p1 = 1.000000
Time used: 38:05
Model 7: beta (10 categories)
TREE # 1: (12, 16, 8, 24, (((((11, 23), (((((13, 28), 7), 27), 14), (((17, (21, 26, 4, 30, 1, 15, 19)), ((22, 10, 25), 3)), (2, 5))), 29), 9), 6), (18, 20))); MP score: 513
lnL(ntime: 48 np: 51): -9793.503225 +0.000000
31..12 31..16 31..8 31..24 31..32 32..33 33..34 34..35 35..36 36..11 36..23 35..37 37..38 38..39 39..40 40..41 41..13 41..28 40..7 39..27 38..14 37..42 42..43 43..44 44..17 44..45 45..21 45..26 45..4 45..30 45..1 45..15 45..19 43..46 46..47 47..22 47..10 47..25 46..3 42..48 48..2 48..5 35..29 34..9 33..6 32..49 49..18 49..20
0.009132 0.011093 0.001297 0.000004 0.010356 0.000817 0.002622 0.003267 0.000715 0.015695 0.007164 0.001039 0.006980 0.009977 0.011508 0.027206 0.000699 0.001894 0.021140 0.050012 0.014795 0.010777 0.007078 0.001338 0.005864 0.000651 0.000004 0.005199 0.000649 0.001297 0.000004 0.000004 0.000004 0.007793 0.000643 0.004541 0.003246 0.001296 0.001951 0.002791 0.011830 0.004620 0.013134 0.010328 0.006351 0.002590 0.015789 0.013703 5.196021 0.104802 0.456900
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.340889
(12: 0.009132, 16: 0.011093, 8: 0.001297, 24: 0.000004, (((((11: 0.015695, 23: 0.007164): 0.000715, (((((13: 0.000699, 28: 0.001894): 0.027206, 7: 0.021140): 0.011508, 27: 0.050012): 0.009977, 14: 0.014795): 0.006980, (((17: 0.005864, (21: 0.000004, 26: 0.005199, 4: 0.000649, 30: 0.001297, 1: 0.000004, 15: 0.000004, 19: 0.000004): 0.000651): 0.001338, ((22: 0.004541, 10: 0.003246, 25: 0.001296): 0.000643, 3: 0.001951): 0.007793): 0.007078, (2: 0.011830, 5: 0.004620): 0.002791): 0.010777): 0.001039, 29: 0.013134): 0.003267, 9: 0.010328): 0.002622, 6: 0.006351): 0.000817, (18: 0.015789, 20: 0.013703): 0.002590): 0.010356);
(C321: 0.009132, C327: 0.011093, C316: 0.001297, C312: 0.000004, (((((C66: 0.015695, C130: 0.007164): 0.000715, (((((C208: 0.000699, C456: 0.001894): 0.027206, C58: 0.021140): 0.011508, C78: 0.050012): 0.009977, C147: 0.014795): 0.006980, (((C242: 0.005864, (C225: 0.000004, C290: 0.005199, C197: 0.000649, C604: 0.001297, C544: 0.000004, C580: 0.000004, C592: 0.000004): 0.000651): 0.001338, ((C492: 0.004541, C596: 0.003246, C388: 0.001296): 0.000643, C556: 0.001951): 0.007793): 0.007078, (C370: 0.011830, C112: 0.004620): 0.002791): 0.010777): 0.001039, C136: 0.013134): 0.003267, C218: 0.010328): 0.002622, C76: 0.006351): 0.000817, (C72: 0.015789, C433: 0.013703): 0.002590): 0.010356);
Detailed output identifying parameters
kappa (ts/tv) = 5.19602
Parameters in M7 (beta):
p = 0.10480 q = 0.45690
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00001 0.00019 0.00205 0.01383 0.06631 0.23630 0.59604 0.95198
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.009 3664.5 1156.5 0.1867 0.0015 0.0080 5.5 9.2
31..16 0.011 3664.5 1156.5 0.1867 0.0018 0.0097 6.6 11.2
31..8 0.001 3664.5 1156.5 0.1867 0.0002 0.0011 0.8 1.3
31..24 0.000 3664.5 1156.5 0.1867 0.0000 0.0000 0.0 0.0
31..32 0.010 3664.5 1156.5 0.1867 0.0017 0.0090 6.2 10.5
32..33 0.001 3664.5 1156.5 0.1867 0.0001 0.0007 0.5 0.8
33..34 0.003 3664.5 1156.5 0.1867 0.0004 0.0023 1.6 2.6
34..35 0.003 3664.5 1156.5 0.1867 0.0005 0.0029 2.0 3.3
35..36 0.001 3664.5 1156.5 0.1867 0.0001 0.0006 0.4 0.7
36..11 0.016 3664.5 1156.5 0.1867 0.0026 0.0137 9.4 15.8
36..23 0.007 3664.5 1156.5 0.1867 0.0012 0.0063 4.3 7.2
35..37 0.001 3664.5 1156.5 0.1867 0.0002 0.0009 0.6 1.0
37..38 0.007 3664.5 1156.5 0.1867 0.0011 0.0061 4.2 7.0
38..39 0.010 3664.5 1156.5 0.1867 0.0016 0.0087 6.0 10.1
39..40 0.012 3664.5 1156.5 0.1867 0.0019 0.0100 6.9 11.6
40..41 0.027 3664.5 1156.5 0.1867 0.0044 0.0238 16.2 27.5
41..13 0.001 3664.5 1156.5 0.1867 0.0001 0.0006 0.4 0.7
41..28 0.002 3664.5 1156.5 0.1867 0.0003 0.0017 1.1 1.9
40..7 0.021 3664.5 1156.5 0.1867 0.0034 0.0185 12.6 21.3
39..27 0.050 3664.5 1156.5 0.1867 0.0082 0.0437 29.9 50.5
38..14 0.015 3664.5 1156.5 0.1867 0.0024 0.0129 8.8 14.9
37..42 0.011 3664.5 1156.5 0.1867 0.0018 0.0094 6.4 10.9
42..43 0.007 3664.5 1156.5 0.1867 0.0012 0.0062 4.2 7.1
43..44 0.001 3664.5 1156.5 0.1867 0.0002 0.0012 0.8 1.4
44..17 0.006 3664.5 1156.5 0.1867 0.0010 0.0051 3.5 5.9
44..45 0.001 3664.5 1156.5 0.1867 0.0001 0.0006 0.4 0.7
45..21 0.000 3664.5 1156.5 0.1867 0.0000 0.0000 0.0 0.0
45..26 0.005 3664.5 1156.5 0.1867 0.0008 0.0045 3.1 5.2
45..4 0.001 3664.5 1156.5 0.1867 0.0001 0.0006 0.4 0.7
45..30 0.001 3664.5 1156.5 0.1867 0.0002 0.0011 0.8 1.3
45..1 0.000 3664.5 1156.5 0.1867 0.0000 0.0000 0.0 0.0
45..15 0.000 3664.5 1156.5 0.1867 0.0000 0.0000 0.0 0.0
45..19 0.000 3664.5 1156.5 0.1867 0.0000 0.0000 0.0 0.0
43..46 0.008 3664.5 1156.5 0.1867 0.0013 0.0068 4.7 7.9
46..47 0.001 3664.5 1156.5 0.1867 0.0001 0.0006 0.4 0.6
47..22 0.005 3664.5 1156.5 0.1867 0.0007 0.0040 2.7 4.6
47..10 0.003 3664.5 1156.5 0.1867 0.0005 0.0028 1.9 3.3
47..25 0.001 3664.5 1156.5 0.1867 0.0002 0.0011 0.8 1.3
46..3 0.002 3664.5 1156.5 0.1867 0.0003 0.0017 1.2 2.0
42..48 0.003 3664.5 1156.5 0.1867 0.0005 0.0024 1.7 2.8
48..2 0.012 3664.5 1156.5 0.1867 0.0019 0.0103 7.1 11.9
48..5 0.005 3664.5 1156.5 0.1867 0.0008 0.0040 2.8 4.7
35..29 0.013 3664.5 1156.5 0.1867 0.0021 0.0115 7.8 13.3
34..9 0.010 3664.5 1156.5 0.1867 0.0017 0.0090 6.2 10.4
33..6 0.006 3664.5 1156.5 0.1867 0.0010 0.0055 3.8 6.4
32..49 0.003 3664.5 1156.5 0.1867 0.0004 0.0023 1.5 2.6
49..18 0.016 3664.5 1156.5 0.1867 0.0026 0.0138 9.4 15.9
49..20 0.014 3664.5 1156.5 0.1867 0.0022 0.0120 8.2 13.8
Time used: 1:37:54
Model 8: beta&w>1 (11 categories)
TREE # 1: (12, 16, 8, 24, (((((11, 23), (((((13, 28), 7), 27), 14), (((17, (21, 26, 4, 30, 1, 15, 19)), ((22, 10, 25), 3)), (2, 5))), 29), 9), 6), (18, 20))); MP score: 513
check convergence..
lnL(ntime: 48 np: 53): -9791.238655 +0.000000
31..12 31..16 31..8 31..24 31..32 32..33 33..34 34..35 35..36 36..11 36..23 35..37 37..38 38..39 39..40 40..41 41..13 41..28 40..7 39..27 38..14 37..42 42..43 43..44 44..17 44..45 45..21 45..26 45..4 45..30 45..1 45..15 45..19 43..46 46..47 47..22 47..10 47..25 46..3 42..48 48..2 48..5 35..29 34..9 33..6 32..49 49..18 49..20
0.009211 0.011181 0.001308 0.000004 0.010476 0.000787 0.002654 0.003303 0.000642 0.015889 0.007290 0.001054 0.007049 0.010042 0.011661 0.027469 0.000704 0.001914 0.021354 0.050588 0.014922 0.010889 0.007144 0.001352 0.005923 0.000658 0.000004 0.005249 0.000656 0.001310 0.000004 0.000004 0.000004 0.007867 0.000648 0.004583 0.003275 0.001307 0.001969 0.002829 0.011950 0.004664 0.013253 0.010418 0.006422 0.002637 0.015941 0.013831 5.225012 0.988835 0.272359 1.442628 3.651817
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.344295
(12: 0.009211, 16: 0.011181, 8: 0.001308, 24: 0.000004, (((((11: 0.015889, 23: 0.007290): 0.000642, (((((13: 0.000704, 28: 0.001914): 0.027469, 7: 0.021354): 0.011661, 27: 0.050588): 0.010042, 14: 0.014922): 0.007049, (((17: 0.005923, (21: 0.000004, 26: 0.005249, 4: 0.000656, 30: 0.001310, 1: 0.000004, 15: 0.000004, 19: 0.000004): 0.000658): 0.001352, ((22: 0.004583, 10: 0.003275, 25: 0.001307): 0.000648, 3: 0.001969): 0.007867): 0.007144, (2: 0.011950, 5: 0.004664): 0.002829): 0.010889): 0.001054, 29: 0.013253): 0.003303, 9: 0.010418): 0.002654, 6: 0.006422): 0.000787, (18: 0.015941, 20: 0.013831): 0.002637): 0.010476);
(C321: 0.009211, C327: 0.011181, C316: 0.001308, C312: 0.000004, (((((C66: 0.015889, C130: 0.007290): 0.000642, (((((C208: 0.000704, C456: 0.001914): 0.027469, C58: 0.021354): 0.011661, C78: 0.050588): 0.010042, C147: 0.014922): 0.007049, (((C242: 0.005923, (C225: 0.000004, C290: 0.005249, C197: 0.000656, C604: 0.001310, C544: 0.000004, C580: 0.000004, C592: 0.000004): 0.000658): 0.001352, ((C492: 0.004583, C596: 0.003275, C388: 0.001307): 0.000648, C556: 0.001969): 0.007867): 0.007144, (C370: 0.011950, C112: 0.004664): 0.002829): 0.010889): 0.001054, C136: 0.013253): 0.003303, C218: 0.010418): 0.002654, C76: 0.006422): 0.000787, (C72: 0.015941, C433: 0.013831): 0.002637): 0.010476);
Detailed output identifying parameters
kappa (ts/tv) = 5.22501
Parameters in M8 (beta&w>1):
p0 = 0.98884 p = 0.27236 q = 1.44263
(p1 = 0.01116) w = 3.65182
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09888 0.09888 0.09888 0.09888 0.09888 0.09888 0.09888 0.09888 0.09888 0.09888 0.01116
w: 0.00001 0.00058 0.00380 0.01312 0.03324 0.07037 0.13293 0.23348 0.39441 0.67522 3.65182
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.009 3663.9 1157.1 0.1947 0.0015 0.0079 5.6 9.2
31..16 0.011 3663.9 1157.1 0.1947 0.0019 0.0096 6.9 11.1
31..8 0.001 3663.9 1157.1 0.1947 0.0002 0.0011 0.8 1.3
31..24 0.000 3663.9 1157.1 0.1947 0.0000 0.0000 0.0 0.0
31..32 0.010 3663.9 1157.1 0.1947 0.0018 0.0090 6.4 10.4
32..33 0.001 3663.9 1157.1 0.1947 0.0001 0.0007 0.5 0.8
33..34 0.003 3663.9 1157.1 0.1947 0.0004 0.0023 1.6 2.6
34..35 0.003 3663.9 1157.1 0.1947 0.0006 0.0028 2.0 3.3
35..36 0.001 3663.9 1157.1 0.1947 0.0001 0.0006 0.4 0.6
36..11 0.016 3663.9 1157.1 0.1947 0.0027 0.0136 9.7 15.8
36..23 0.007 3663.9 1157.1 0.1947 0.0012 0.0063 4.5 7.2
35..37 0.001 3663.9 1157.1 0.1947 0.0002 0.0009 0.6 1.0
37..38 0.007 3663.9 1157.1 0.1947 0.0012 0.0061 4.3 7.0
38..39 0.010 3663.9 1157.1 0.1947 0.0017 0.0086 6.2 10.0
39..40 0.012 3663.9 1157.1 0.1947 0.0020 0.0100 7.1 11.6
40..41 0.027 3663.9 1157.1 0.1947 0.0046 0.0236 16.8 27.3
41..13 0.001 3663.9 1157.1 0.1947 0.0001 0.0006 0.4 0.7
41..28 0.002 3663.9 1157.1 0.1947 0.0003 0.0016 1.2 1.9
40..7 0.021 3663.9 1157.1 0.1947 0.0036 0.0183 13.1 21.2
39..27 0.051 3663.9 1157.1 0.1947 0.0085 0.0435 31.0 50.3
38..14 0.015 3663.9 1157.1 0.1947 0.0025 0.0128 9.1 14.8
37..42 0.011 3663.9 1157.1 0.1947 0.0018 0.0094 6.7 10.8
42..43 0.007 3663.9 1157.1 0.1947 0.0012 0.0061 4.4 7.1
43..44 0.001 3663.9 1157.1 0.1947 0.0002 0.0012 0.8 1.3
44..17 0.006 3663.9 1157.1 0.1947 0.0010 0.0051 3.6 5.9
44..45 0.001 3663.9 1157.1 0.1947 0.0001 0.0006 0.4 0.7
45..21 0.000 3663.9 1157.1 0.1947 0.0000 0.0000 0.0 0.0
45..26 0.005 3663.9 1157.1 0.1947 0.0009 0.0045 3.2 5.2
45..4 0.001 3663.9 1157.1 0.1947 0.0001 0.0006 0.4 0.7
45..30 0.001 3663.9 1157.1 0.1947 0.0002 0.0011 0.8 1.3
45..1 0.000 3663.9 1157.1 0.1947 0.0000 0.0000 0.0 0.0
45..15 0.000 3663.9 1157.1 0.1947 0.0000 0.0000 0.0 0.0
45..19 0.000 3663.9 1157.1 0.1947 0.0000 0.0000 0.0 0.0
43..46 0.008 3663.9 1157.1 0.1947 0.0013 0.0068 4.8 7.8
46..47 0.001 3663.9 1157.1 0.1947 0.0001 0.0006 0.4 0.6
47..22 0.005 3663.9 1157.1 0.1947 0.0008 0.0039 2.8 4.6
47..10 0.003 3663.9 1157.1 0.1947 0.0005 0.0028 2.0 3.3
47..25 0.001 3663.9 1157.1 0.1947 0.0002 0.0011 0.8 1.3
46..3 0.002 3663.9 1157.1 0.1947 0.0003 0.0017 1.2 2.0
42..48 0.003 3663.9 1157.1 0.1947 0.0005 0.0024 1.7 2.8
48..2 0.012 3663.9 1157.1 0.1947 0.0020 0.0103 7.3 11.9
48..5 0.005 3663.9 1157.1 0.1947 0.0008 0.0040 2.9 4.6
35..29 0.013 3663.9 1157.1 0.1947 0.0022 0.0114 8.1 13.2
34..9 0.010 3663.9 1157.1 0.1947 0.0017 0.0089 6.4 10.4
33..6 0.006 3663.9 1157.1 0.1947 0.0011 0.0055 3.9 6.4
32..49 0.003 3663.9 1157.1 0.1947 0.0004 0.0023 1.6 2.6
49..18 0.016 3663.9 1157.1 0.1947 0.0027 0.0137 9.8 15.8
49..20 0.014 3663.9 1157.1 0.1947 0.0023 0.0119 8.5 13.7
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C544)
Pr(w>1) post mean +- SE for w
12 R 0.833 3.143
42 R 0.702 2.742
99 I 0.805 3.059
456 E 0.764 2.934
593 M 0.658 2.609
662 S 0.901 3.353
705 L 0.845 3.180
1397 S 0.519 2.161
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C544)
Pr(w>1) post mean +- SE for w
12 R 0.839 1.415 +- 0.371
42 R 0.811 1.390 +- 0.391
99 I 0.832 1.409 +- 0.375
109 V 0.506 1.052 +- 0.554
114 I 0.501 1.045 +- 0.554
118 D 0.663 1.230 +- 0.508
130 P 0.610 1.172 +- 0.529
317 L 0.579 1.138 +- 0.539
397 S 0.547 1.100 +- 0.546
414 N 0.517 1.065 +- 0.552
456 E 0.823 1.401 +- 0.382
550 A 0.666 1.233 +- 0.507
555 T 0.542 1.094 +- 0.547
593 M 0.803 1.383 +- 0.397
607 N 0.530 1.080 +- 0.550
654 S 0.591 1.151 +- 0.535
662 S 0.889 1.460 +- 0.320
689 A 0.501 1.046 +- 0.554
705 L 0.842 1.418 +- 0.368
886 P 0.607 1.168 +- 0.530
994 V 0.503 1.048 +- 0.554
1008 V 0.523 1.072 +- 0.551
1141 G 0.679 1.248 +- 0.500
1397 S 0.702 1.272 +- 0.488
1526 L 0.581 1.139 +- 0.538
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 0.984 0.016 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.033 0.246 0.324 0.211 0.104 0.048 0.034
ws: 0.958 0.042 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
Time used: 2:41:35
Model 1: NearlyNeutral -9792.772830 Model 2: PositiveSelection -9791.660893 Model 7: beta -9793.503225 Model 8: beta&w>1 -9791.238655 Model 2 vs 1 2.223874 Model 8 vs 7 4.529140
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
