--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -674.84 -692.60
2 -674.29 -693.04
--------------------------------------
TOTAL -674.53 -692.84
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.103102 0.000525 0.061581 0.149193 0.101024 1329.14 1383.99 1.000
r(A<->C){all} 0.131387 0.004652 0.023319 0.269231 0.120783 187.27 218.42 1.005
r(A<->G){all} 0.142683 0.004573 0.025689 0.276886 0.132121 231.56 274.41 1.000
r(A<->T){all} 0.171495 0.004495 0.058897 0.305522 0.161596 139.97 239.53 1.001
r(C<->G){all} 0.033746 0.001128 0.000008 0.101200 0.023514 340.55 370.42 1.000
r(C<->T){all} 0.361217 0.007661 0.204502 0.536175 0.358611 293.52 311.81 1.000
r(G<->T){all} 0.159472 0.003627 0.057656 0.277762 0.151172 229.51 291.88 1.000
pi(A){all} 0.198602 0.000440 0.158771 0.239433 0.197852 717.17 898.55 1.000
pi(C){all} 0.223892 0.000469 0.182901 0.266706 0.222984 905.84 1009.21 1.000
pi(G){all} 0.245029 0.000527 0.201416 0.292622 0.244926 794.23 879.16 1.000
pi(T){all} 0.332477 0.000600 0.284229 0.378570 0.332514 987.18 1006.73 1.000
alpha{1,2} 0.495748 0.405915 0.000190 1.742699 0.272084 634.54 716.04 1.001
alpha{3} 1.510256 1.299298 0.002161 3.715868 1.237413 1045.64 1072.09 1.001
pinvar{all} 0.385854 0.038984 0.000337 0.695691 0.394868 612.29 671.12 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -634.901618
Model 2: PositiveSelection -632.908114
Model 7: beta -634.998253
Model 8: beta&w>1 -632.915102
Model 2 vs 1 3.987008
Model 8 vs 7 4.166302
-- Starting log on Thu Nov 17 16:36:25 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_L_VIPR_ALG4_672096710_293_622_1_2012_02_China_Swine_PEDV.result--
-- Starting log on Thu Nov 17 16:38:32 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_L_VIPR_ALG4_672096710_293_622_1_2012_02_China_Swine_PEDV.result--
-- Starting log on Thu Nov 17 22:39:55 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/LZW_L_VIPR_ALG4_672096710_293_622_1_2012_02_China_Swine_PEDV.result/gapped_alignment/codeml,LZW_L_VIPR_ALG4_672096710_293_622_1_2012_02_China_Swine_PEDV.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 30 taxa and 330 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C65
Taxon 2 -> C619
Taxon 3 -> C295
Taxon 4 -> C196
Taxon 5 -> C93
Taxon 6 -> C597
Taxon 7 -> C208
Taxon 8 -> C75
Taxon 9 -> C651
Taxon 10 -> C337
Taxon 11 -> C545
Taxon 12 -> C224
Taxon 13 -> C60
Taxon 14 -> C312
Taxon 15 -> C628
Taxon 16 -> C627
Taxon 17 -> C389
Taxon 18 -> C284
Taxon 19 -> C117
Taxon 20 -> C380
Taxon 21 -> C68
Taxon 22 -> C165
Taxon 23 -> C129
Taxon 24 -> C315
Taxon 25 -> C493
Taxon 26 -> C381
Taxon 27 -> C584
Taxon 28 -> C561
Taxon 29 -> C411
Taxon 30 -> C596
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668724797
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1714854644
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 0882076890
Seed = 972962688
Swapseed = 1668724797
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 7 unique site patterns
Division 2 has 10 unique site patterns
Division 3 has 21 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -1132.188072 -- 82.122948
Chain 2 -- -1116.130957 -- 82.122948
Chain 3 -- -1117.003225 -- 82.122948
Chain 4 -- -1098.848153 -- 82.122948
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -1118.733540 -- 82.122948
Chain 2 -- -1130.108279 -- 82.122948
Chain 3 -- -1128.204853 -- 82.122948
Chain 4 -- -1123.772666 -- 82.122948
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-1132.188] (-1116.131) (-1117.003) (-1098.848) * [-1118.734] (-1130.108) (-1128.205) (-1123.773)
1000 -- (-716.757) (-764.978) [-706.010] (-737.468) * (-742.463) (-744.315) [-699.878] (-714.602) -- 0:16:39
2000 -- (-710.179) (-702.672) [-689.116] (-687.510) * (-700.471) (-699.431) [-684.060] (-699.376) -- 0:16:38
3000 -- (-692.712) (-716.587) [-688.074] (-676.785) * (-692.690) (-690.742) [-678.327] (-709.039) -- 0:11:04
4000 -- (-690.759) (-703.025) [-685.248] (-691.704) * (-688.769) (-687.882) [-681.430] (-713.628) -- 0:12:27
5000 -- (-689.621) (-694.638) [-683.798] (-688.368) * [-689.182] (-685.743) (-690.341) (-691.851) -- 0:13:16
Average standard deviation of split frequencies: 0.079377
6000 -- [-682.280] (-680.495) (-688.872) (-685.846) * (-708.177) [-686.953] (-677.988) (-694.214) -- 0:11:02
7000 -- (-674.870) (-679.846) (-691.731) [-678.028] * (-688.592) [-676.492] (-683.498) (-680.667) -- 0:11:49
8000 -- (-680.668) [-681.732] (-686.185) (-683.913) * (-689.163) (-684.569) (-687.973) [-675.521] -- 0:12:24
9000 -- [-681.938] (-685.022) (-685.761) (-692.966) * (-684.825) (-693.242) (-688.596) [-677.798] -- 0:12:50
10000 -- (-693.514) (-678.482) (-684.632) [-676.349] * (-683.773) (-700.451) [-688.857] (-675.646) -- 0:11:33
Average standard deviation of split frequencies: 0.071281
11000 -- (-697.894) (-681.908) (-687.847) [-690.025] * (-680.951) (-700.922) (-689.090) [-678.340] -- 0:11:59
12000 -- (-694.051) (-695.811) (-689.767) [-682.786] * [-680.544] (-690.036) (-706.680) (-694.292) -- 0:12:21
13000 -- [-680.405] (-709.624) (-697.443) (-682.147) * [-680.232] (-690.988) (-698.422) (-684.544) -- 0:11:23
14000 -- (-689.550) (-706.870) [-681.242] (-681.451) * [-681.987] (-683.849) (-682.488) (-682.033) -- 0:11:44
15000 -- (-695.557) (-699.468) [-674.302] (-688.646) * (-689.576) [-684.763] (-686.108) (-685.123) -- 0:12:02
Average standard deviation of split frequencies: 0.061932
16000 -- (-679.933) (-721.344) [-681.564] (-678.516) * (-683.587) (-704.009) [-679.010] (-683.161) -- 0:12:18
17000 -- [-687.180] (-726.754) (-686.385) (-680.076) * (-690.540) (-711.856) [-687.647] (-694.077) -- 0:11:33
18000 -- (-688.529) (-727.614) (-682.127) [-694.780] * [-684.266] (-701.513) (-681.010) (-702.638) -- 0:11:49
19000 -- [-691.500] (-730.787) (-684.917) (-679.822) * [-679.146] (-724.726) (-692.674) (-680.529) -- 0:12:02
20000 -- (-687.196) (-729.284) (-694.660) [-675.759] * [-678.289] (-690.793) (-697.069) (-686.352) -- 0:12:15
Average standard deviation of split frequencies: 0.058926
21000 -- (-696.510) (-737.903) (-685.354) [-684.404] * (-693.729) [-678.270] (-674.795) (-679.958) -- 0:11:39
22000 -- (-710.737) (-733.696) (-679.103) [-681.575] * [-686.678] (-680.058) (-694.875) (-711.610) -- 0:11:51
23000 -- (-694.023) (-739.493) (-683.832) [-682.725] * [-685.996] (-687.231) (-689.468) (-723.399) -- 0:12:02
24000 -- [-681.546] (-743.371) (-685.480) (-679.018) * (-682.222) (-685.446) [-682.843] (-718.026) -- 0:11:31
25000 -- [-683.433] (-726.300) (-680.725) (-684.620) * (-689.580) [-679.692] (-684.545) (-719.555) -- 0:11:42
Average standard deviation of split frequencies: 0.052378
26000 -- [-674.749] (-731.054) (-679.946) (-702.036) * (-698.095) [-678.575] (-690.589) (-728.430) -- 0:11:51
27000 -- (-692.978) (-745.155) (-682.529) [-678.801] * (-694.806) [-674.452] (-680.142) (-718.490) -- 0:12:00
28000 -- (-692.717) (-735.371) (-686.971) [-693.508] * (-688.128) (-676.061) [-672.798] (-726.000) -- 0:11:34
29000 -- (-679.805) (-732.829) (-689.646) [-683.514] * (-695.733) [-681.963] (-681.132) (-717.429) -- 0:11:43
30000 -- (-686.207) (-734.449) [-678.572] (-687.854) * (-674.627) [-686.066] (-683.276) (-730.035) -- 0:11:51
Average standard deviation of split frequencies: 0.055998
31000 -- (-688.941) (-730.652) (-698.491) [-682.628] * (-691.597) (-689.891) [-682.063] (-728.208) -- 0:11:58
32000 -- (-700.006) (-735.958) (-683.740) [-682.618] * (-699.933) (-678.668) [-686.717] (-728.356) -- 0:11:35
33000 -- (-697.746) (-744.059) [-682.391] (-683.873) * (-698.396) [-677.892] (-695.651) (-718.645) -- 0:11:43
34000 -- (-686.398) (-739.017) [-682.666] (-701.933) * (-695.568) [-676.928] (-685.671) (-723.788) -- 0:11:50
35000 -- (-679.766) (-738.646) [-675.135] (-701.356) * (-690.813) [-676.808] (-680.822) (-721.321) -- 0:11:29
Average standard deviation of split frequencies: 0.048013
36000 -- [-684.205] (-734.873) (-684.893) (-681.577) * (-685.112) (-684.085) [-684.628] (-722.427) -- 0:11:36
37000 -- (-685.120) (-745.034) (-679.196) [-680.565] * (-689.596) (-684.169) [-678.921] (-723.161) -- 0:11:42
38000 -- (-688.803) (-732.489) [-683.725] (-679.453) * [-685.223] (-692.778) (-679.832) (-717.844) -- 0:11:48
39000 -- (-691.916) (-731.871) [-684.608] (-678.877) * (-686.338) (-688.940) [-681.945] (-715.651) -- 0:11:29
40000 -- (-690.459) (-732.139) (-687.769) [-682.616] * (-682.992) (-685.640) [-679.670] (-720.972) -- 0:11:36
Average standard deviation of split frequencies: 0.042617
41000 -- (-696.612) (-745.092) [-676.710] (-681.996) * (-689.121) (-684.964) [-685.425] (-724.928) -- 0:11:41
42000 -- (-672.555) (-731.803) (-692.451) [-683.011] * [-685.928] (-681.699) (-686.787) (-730.118) -- 0:11:24
43000 -- (-683.679) (-740.724) (-683.549) [-678.758] * (-685.559) [-684.785] (-694.817) (-720.736) -- 0:11:29
44000 -- [-675.905] (-731.437) (-680.001) (-693.276) * (-694.381) [-678.118] (-682.360) (-714.552) -- 0:11:35
45000 -- (-681.725) (-731.016) (-684.470) [-685.028] * (-676.305) [-684.972] (-681.652) (-732.934) -- 0:11:40
Average standard deviation of split frequencies: 0.045969
46000 -- (-694.944) (-737.438) [-674.698] (-684.479) * [-684.041] (-700.791) (-683.345) (-724.562) -- 0:11:24
47000 -- [-681.627] (-725.398) (-677.611) (-685.200) * (-693.812) [-681.440] (-694.588) (-729.724) -- 0:11:29
48000 -- (-696.649) (-742.455) (-684.896) [-681.014] * (-685.312) [-682.217] (-696.784) (-736.547) -- 0:11:14
49000 -- [-680.448] (-747.778) (-682.093) (-672.679) * [-694.195] (-682.242) (-698.445) (-735.696) -- 0:11:19
50000 -- [-677.153] (-742.499) (-687.161) (-692.581) * (-685.668) [-682.941] (-689.031) (-726.968) -- 0:11:05
Average standard deviation of split frequencies: 0.040881
51000 -- (-685.626) (-736.491) (-681.167) [-681.019] * (-693.080) [-680.038] (-675.461) (-724.352) -- 0:11:09
52000 -- (-678.179) (-748.130) (-684.563) [-682.839] * [-682.868] (-696.493) (-684.414) (-724.550) -- 0:10:56
53000 -- (-697.444) (-730.049) [-687.414] (-691.986) * (-680.094) [-682.337] (-687.282) (-715.040) -- 0:10:43
54000 -- (-682.396) (-739.170) (-695.982) [-678.413] * (-682.929) (-694.017) [-683.374] (-727.334) -- 0:10:48
55000 -- (-685.185) (-729.550) [-683.433] (-685.750) * (-688.227) [-687.718] (-685.320) (-737.385) -- 0:10:35
Average standard deviation of split frequencies: 0.036223
56000 -- [-687.569] (-734.817) (-688.846) (-693.408) * [-687.435] (-696.735) (-693.525) (-728.921) -- 0:10:40
57000 -- (-689.173) (-744.035) [-691.162] (-687.437) * [-682.384] (-691.750) (-692.248) (-717.365) -- 0:10:28
58000 -- (-692.902) (-746.266) [-686.273] (-703.110) * [-674.391] (-682.963) (-689.563) (-733.706) -- 0:10:33
59000 -- (-694.929) (-747.843) [-690.141] (-694.365) * (-677.945) [-680.458] (-698.567) (-722.500) -- 0:10:22
60000 -- (-683.821) (-741.603) [-688.263] (-690.167) * [-680.638] (-677.397) (-689.352) (-725.887) -- 0:10:26
Average standard deviation of split frequencies: 0.035210
61000 -- (-689.490) (-743.821) (-686.112) [-684.114] * [-681.230] (-676.798) (-691.736) (-721.838) -- 0:10:15
62000 -- (-685.010) (-742.663) (-680.727) [-686.151] * (-691.137) [-680.910] (-686.265) (-722.482) -- 0:10:20
63000 -- (-699.281) (-743.046) [-680.241] (-691.647) * (-713.023) (-687.043) [-688.855] (-725.901) -- 0:10:09
64000 -- (-699.257) (-732.173) (-690.293) [-675.894] * [-687.037] (-687.848) (-688.624) (-715.193) -- 0:10:14
65000 -- (-689.851) (-733.833) (-692.380) [-678.074] * [-682.398] (-694.395) (-693.634) (-720.695) -- 0:10:04
Average standard deviation of split frequencies: 0.029998
66000 -- (-693.632) (-735.708) [-693.397] (-691.451) * [-683.097] (-690.843) (-691.550) (-734.731) -- 0:09:54
67000 -- (-686.001) (-740.648) (-691.184) [-684.460] * [-676.922] (-678.734) (-680.896) (-718.023) -- 0:09:58
68000 -- (-686.853) (-735.990) (-681.591) [-681.628] * (-692.525) [-690.191] (-684.558) (-720.569) -- 0:09:49
69000 -- (-694.333) (-734.436) [-686.412] (-682.318) * [-681.431] (-680.633) (-683.837) (-733.034) -- 0:09:53
70000 -- (-686.892) (-749.881) (-695.044) [-685.707] * (-684.501) [-686.927] (-698.334) (-740.475) -- 0:09:44
Average standard deviation of split frequencies: 0.027272
71000 -- (-687.768) (-743.657) (-691.922) [-676.935] * [-680.216] (-678.179) (-680.934) (-721.665) -- 0:09:48
72000 -- (-678.366) (-737.323) [-682.420] (-696.565) * (-687.918) [-679.676] (-687.286) (-734.223) -- 0:09:40
73000 -- (-695.207) (-737.855) [-689.602] (-685.376) * (-685.750) [-675.746] (-677.977) (-722.328) -- 0:09:44
74000 -- (-692.966) (-740.455) (-697.888) [-670.517] * (-686.843) [-680.582] (-676.447) (-721.964) -- 0:09:35
75000 -- (-687.005) (-733.562) (-688.152) [-671.319] * (-698.746) (-680.683) [-678.568] (-724.583) -- 0:09:39
Average standard deviation of split frequencies: 0.025939
76000 -- (-689.015) (-735.538) (-678.843) [-678.930] * (-687.107) [-680.214] (-680.828) (-737.617) -- 0:09:31
77000 -- [-680.023] (-730.032) (-680.982) (-685.294) * (-687.186) [-682.034] (-680.857) (-725.920) -- 0:09:35
78000 -- (-680.588) (-736.933) [-670.370] (-676.886) * (-689.675) (-689.595) [-682.495] (-724.118) -- 0:09:27
79000 -- [-679.627] (-738.837) (-682.893) (-690.803) * (-690.548) [-684.104] (-699.264) (-721.163) -- 0:09:19
80000 -- (-690.159) (-730.962) [-675.714] (-697.696) * (-678.053) [-683.707] (-696.973) (-732.612) -- 0:09:23
Average standard deviation of split frequencies: 0.024792
81000 -- (-689.275) (-736.318) [-679.594] (-693.708) * (-689.398) [-679.671] (-691.788) (-725.357) -- 0:09:15
82000 -- (-688.170) (-730.701) [-682.828] (-704.729) * (-689.003) [-686.479] (-687.700) (-723.779) -- 0:09:19
83000 -- [-684.134] (-736.562) (-689.623) (-686.680) * (-683.394) (-690.140) [-681.746] (-728.008) -- 0:09:12
84000 -- [-682.511] (-737.471) (-697.383) (-685.189) * (-685.174) (-676.387) [-696.524] (-737.012) -- 0:09:16
85000 -- (-685.295) (-735.713) [-698.808] (-695.546) * (-684.273) [-678.670] (-691.479) (-729.272) -- 0:09:09
Average standard deviation of split frequencies: 0.025276
86000 -- (-693.121) (-755.352) [-678.355] (-684.986) * [-685.611] (-696.720) (-691.506) (-733.337) -- 0:09:12
87000 -- [-685.973] (-748.149) (-684.613) (-699.669) * (-688.920) [-682.699] (-692.524) (-720.450) -- 0:09:05
88000 -- [-677.489] (-732.206) (-691.621) (-690.082) * [-683.857] (-687.251) (-697.834) (-725.684) -- 0:09:09
89000 -- [-676.265] (-735.848) (-685.881) (-680.698) * (-692.550) (-685.294) [-678.956] (-738.502) -- 0:09:02
90000 -- (-683.635) (-753.706) (-692.518) [-679.089] * (-685.063) [-679.544] (-686.116) (-737.452) -- 0:09:06
Average standard deviation of split frequencies: 0.021610
91000 -- (-680.132) (-741.360) [-676.613] (-699.910) * (-684.223) (-693.795) [-680.836] (-733.489) -- 0:08:59
92000 -- (-688.672) (-747.913) [-688.187] (-703.676) * [-684.794] (-685.718) (-688.766) (-739.682) -- 0:08:52
93000 -- (-695.670) (-732.674) [-679.050] (-685.633) * (-678.286) [-684.893] (-685.322) (-718.912) -- 0:08:56
94000 -- [-684.278] (-726.745) (-677.741) (-690.524) * (-685.291) [-685.998] (-683.246) (-724.274) -- 0:08:50
95000 -- (-693.660) (-733.496) [-677.384] (-681.948) * [-684.946] (-688.588) (-687.785) (-722.622) -- 0:08:53
Average standard deviation of split frequencies: 0.022675
96000 -- (-687.431) (-737.190) [-681.780] (-682.638) * (-691.613) [-685.873] (-682.584) (-722.618) -- 0:08:47
97000 -- (-694.676) (-739.534) (-688.966) [-681.518] * (-688.841) (-684.856) [-683.906] (-727.377) -- 0:08:50
98000 -- (-684.679) (-733.501) [-681.705] (-702.002) * (-680.798) [-679.243] (-690.761) (-729.219) -- 0:08:44
99000 -- (-692.218) (-733.705) (-680.707) [-684.049] * (-688.958) [-678.989] (-690.885) (-733.237) -- 0:08:47
100000 -- (-695.387) (-737.680) (-688.999) [-683.125] * (-689.727) [-680.812] (-690.221) (-727.511) -- 0:08:42
Average standard deviation of split frequencies: 0.021995
101000 -- (-688.227) (-741.066) [-678.155] (-679.731) * [-683.264] (-703.962) (-685.311) (-728.073) -- 0:08:45
102000 -- [-684.834] (-739.780) (-696.605) (-692.429) * (-678.096) (-709.553) [-688.888] (-721.247) -- 0:08:39
103000 -- (-688.989) (-746.539) (-694.613) [-682.188] * (-687.894) (-680.933) [-679.875] (-717.134) -- 0:08:42
104000 -- [-681.579] (-728.295) (-699.704) (-684.120) * (-687.676) (-680.609) [-681.635] (-721.022) -- 0:08:36
105000 -- [-680.634] (-730.434) (-678.429) (-684.466) * [-679.221] (-695.287) (-680.303) (-731.394) -- 0:08:31
Average standard deviation of split frequencies: 0.024523
106000 -- (-687.290) (-733.379) (-680.201) [-676.976] * (-676.590) (-691.773) [-679.946] (-726.639) -- 0:08:34
107000 -- (-684.713) (-732.416) (-684.878) [-685.836] * [-685.615] (-673.707) (-686.217) (-723.417) -- 0:08:29
108000 -- [-686.609] (-730.230) (-694.761) (-693.944) * [-682.914] (-680.027) (-691.080) (-726.654) -- 0:08:32
109000 -- (-695.620) (-740.629) [-684.629] (-679.064) * [-678.000] (-689.623) (-682.234) (-718.701) -- 0:08:26
110000 -- [-683.111] (-748.846) (-680.751) (-693.301) * (-683.406) (-696.663) [-686.194] (-728.797) -- 0:08:29
Average standard deviation of split frequencies: 0.023124
111000 -- (-679.880) (-737.646) [-687.486] (-695.282) * (-691.739) [-685.017] (-679.812) (-723.129) -- 0:08:24
112000 -- (-679.143) (-730.472) [-688.652] (-682.231) * (-681.604) [-679.707] (-683.963) (-726.205) -- 0:08:27
113000 -- (-686.122) (-736.018) (-691.327) [-680.223] * (-687.444) [-677.895] (-692.425) (-731.116) -- 0:08:22
114000 -- (-691.536) (-735.862) (-693.835) [-680.388] * (-685.929) [-684.179] (-682.371) (-731.202) -- 0:08:25
115000 -- [-687.597] (-740.293) (-687.373) (-681.273) * (-690.698) [-676.340] (-687.559) (-725.333) -- 0:08:20
Average standard deviation of split frequencies: 0.019430
116000 -- (-686.835) (-734.968) (-690.494) [-682.156] * (-679.490) (-684.741) [-675.676] (-732.767) -- 0:08:22
117000 -- [-682.181] (-741.098) (-694.005) (-677.417) * [-678.910] (-684.199) (-687.652) (-714.577) -- 0:08:18
118000 -- (-686.529) (-724.009) (-685.934) [-690.582] * (-683.287) (-681.480) [-678.468] (-732.918) -- 0:08:20
119000 -- (-687.782) (-734.517) (-694.143) [-680.588] * (-675.840) [-686.844] (-697.301) (-727.397) -- 0:08:16
120000 -- (-694.370) (-742.312) (-688.243) [-684.990] * (-682.515) (-701.132) [-679.180] (-734.151) -- 0:08:18
Average standard deviation of split frequencies: 0.018313
121000 -- [-688.463] (-739.331) (-690.858) (-683.391) * [-677.595] (-688.021) (-694.579) (-726.809) -- 0:08:13
122000 -- (-678.136) (-745.223) (-690.195) [-684.515] * [-675.696] (-676.715) (-697.031) (-730.242) -- 0:08:09
123000 -- [-681.092] (-748.239) (-685.722) (-680.189) * [-680.688] (-679.221) (-694.230) (-718.855) -- 0:08:11
124000 -- (-678.319) (-736.460) [-685.194] (-682.726) * (-683.042) (-687.692) [-693.292] (-726.141) -- 0:08:07
125000 -- (-682.638) (-737.189) (-698.035) [-692.438] * (-680.991) (-687.539) [-672.408] (-728.579) -- 0:08:09
Average standard deviation of split frequencies: 0.018600
126000 -- (-683.816) (-740.345) [-683.220] (-697.569) * [-683.776] (-679.556) (-684.306) (-726.920) -- 0:08:05
127000 -- (-681.927) (-728.320) (-692.289) [-693.440] * [-683.224] (-675.943) (-684.398) (-725.097) -- 0:08:08
128000 -- (-682.790) (-738.726) [-685.004] (-689.379) * (-681.821) [-674.003] (-690.915) (-728.345) -- 0:08:03
129000 -- [-683.915] (-739.173) (-685.321) (-686.625) * [-688.687] (-681.432) (-676.872) (-716.873) -- 0:08:06
130000 -- [-686.794] (-733.944) (-681.007) (-689.970) * [-678.610] (-690.746) (-685.488) (-711.676) -- 0:08:01
Average standard deviation of split frequencies: 0.018913
131000 -- (-693.518) (-742.301) [-683.042] (-692.954) * (-683.814) (-695.574) [-678.952] (-715.141) -- 0:08:04
132000 -- [-678.866] (-741.262) (-694.226) (-692.522) * [-679.920] (-696.807) (-692.701) (-726.455) -- 0:08:00
133000 -- [-679.299] (-732.605) (-710.351) (-684.378) * (-683.641) (-697.527) [-687.292] (-722.270) -- 0:08:02
134000 -- [-674.046] (-740.257) (-681.895) (-678.311) * (-684.295) (-682.078) [-690.648] (-735.713) -- 0:07:58
135000 -- (-675.531) (-733.780) (-686.633) [-680.148] * (-683.992) (-686.171) [-681.755] (-729.950) -- 0:07:54
Average standard deviation of split frequencies: 0.019117
136000 -- (-690.027) (-732.178) [-679.830] (-678.167) * (-697.586) [-688.474] (-683.132) (-723.565) -- 0:07:56
137000 -- (-687.079) (-743.166) (-685.960) [-675.028] * (-696.990) [-681.138] (-687.498) (-732.130) -- 0:07:52
138000 -- [-683.113] (-737.248) (-686.906) (-682.976) * (-691.035) [-680.513] (-686.562) (-723.558) -- 0:07:54
139000 -- (-686.516) (-736.075) [-679.551] (-679.811) * [-682.330] (-678.280) (-704.250) (-727.336) -- 0:07:50
140000 -- (-684.339) (-731.134) [-681.028] (-695.505) * (-686.804) [-680.696] (-689.594) (-722.729) -- 0:07:53
Average standard deviation of split frequencies: 0.018222
141000 -- (-686.786) (-742.296) (-688.309) [-674.675] * [-681.742] (-686.301) (-695.974) (-726.801) -- 0:07:49
142000 -- [-678.456] (-731.649) (-683.111) (-694.323) * (-675.546) [-680.540] (-695.273) (-729.800) -- 0:07:51
143000 -- [-680.836] (-731.985) (-686.011) (-686.039) * (-684.975) [-682.772] (-696.847) (-722.726) -- 0:07:47
144000 -- (-681.951) (-740.643) [-684.340] (-689.367) * [-681.465] (-687.407) (-694.729) (-732.260) -- 0:07:49
145000 -- [-675.671] (-733.367) (-692.381) (-687.733) * (-692.575) [-678.220] (-694.096) (-727.350) -- 0:07:45
Average standard deviation of split frequencies: 0.019563
146000 -- (-680.986) (-733.007) [-679.086] (-691.664) * (-677.823) [-677.617] (-693.624) (-726.453) -- 0:07:47
147000 -- [-685.013] (-735.364) (-689.476) (-679.717) * [-677.471] (-678.256) (-699.901) (-723.171) -- 0:07:44
148000 -- (-691.338) (-733.194) [-679.456] (-683.437) * [-676.667] (-686.464) (-698.737) (-738.692) -- 0:07:46
149000 -- (-686.582) (-739.365) [-678.367] (-686.650) * [-683.028] (-684.412) (-682.779) (-726.106) -- 0:07:42
150000 -- (-685.338) (-739.004) (-691.611) [-685.823] * (-689.952) [-683.831] (-684.531) (-728.545) -- 0:07:44
Average standard deviation of split frequencies: 0.019555
151000 -- (-687.160) (-740.326) [-687.068] (-684.646) * (-680.981) [-684.765] (-681.032) (-731.075) -- 0:07:41
152000 -- (-679.204) (-742.475) (-695.767) [-685.279] * (-689.783) (-693.831) [-686.884] (-730.628) -- 0:07:37
153000 -- (-693.502) (-724.514) (-692.079) [-687.475] * [-679.784] (-691.814) (-692.342) (-745.238) -- 0:07:39
154000 -- (-696.233) (-735.035) [-687.459] (-675.950) * (-679.181) [-684.777] (-682.230) (-732.200) -- 0:07:35
155000 -- (-684.238) (-730.794) (-688.908) [-683.832] * (-688.879) (-678.696) [-688.163] (-734.744) -- 0:07:37
Average standard deviation of split frequencies: 0.017856
156000 -- (-684.210) (-738.019) (-686.093) [-681.331] * [-674.169] (-685.237) (-685.414) (-725.442) -- 0:07:34
157000 -- [-688.213] (-732.371) (-692.748) (-683.845) * [-688.808] (-699.326) (-687.601) (-728.510) -- 0:07:36
158000 -- [-677.551] (-729.903) (-685.269) (-674.411) * [-676.708] (-696.971) (-679.875) (-738.982) -- 0:07:32
159000 -- (-684.650) (-734.436) [-691.041] (-688.104) * (-688.034) (-698.288) [-672.662] (-730.814) -- 0:07:34
160000 -- (-683.234) (-729.931) [-686.294] (-692.881) * (-684.581) (-703.301) [-682.669] (-727.174) -- 0:07:31
Average standard deviation of split frequencies: 0.019713
161000 -- (-687.645) (-733.506) [-686.947] (-692.042) * [-673.800] (-708.228) (-685.223) (-726.807) -- 0:07:33
162000 -- (-687.763) (-742.378) (-684.988) [-675.810] * [-685.302] (-696.116) (-694.061) (-724.862) -- 0:07:30
163000 -- (-693.461) (-723.332) (-685.337) [-680.134] * [-680.045] (-694.460) (-684.844) (-733.788) -- 0:07:31
164000 -- (-686.262) (-734.046) (-695.032) [-681.908] * (-677.604) [-682.718] (-694.800) (-725.707) -- 0:07:28
165000 -- [-692.926] (-742.073) (-681.169) (-687.444) * [-679.416] (-688.565) (-687.009) (-720.296) -- 0:07:25
Average standard deviation of split frequencies: 0.020567
166000 -- (-696.234) (-731.115) [-680.866] (-692.959) * (-677.174) [-681.405] (-688.598) (-731.105) -- 0:07:27
167000 -- (-686.385) (-730.074) [-680.665] (-690.933) * [-675.257] (-699.825) (-682.361) (-732.789) -- 0:07:23
168000 -- [-681.304] (-727.021) (-694.673) (-688.933) * [-679.615] (-684.992) (-690.889) (-729.813) -- 0:07:25
169000 -- (-683.305) (-742.764) [-671.388] (-692.126) * (-681.224) [-677.300] (-684.011) (-717.041) -- 0:07:22
170000 -- (-689.277) (-731.319) [-679.286] (-702.158) * (-678.102) [-681.007] (-689.124) (-726.727) -- 0:07:24
Average standard deviation of split frequencies: 0.021930
171000 -- (-688.149) (-731.046) [-684.045] (-702.100) * (-676.069) [-675.497] (-683.834) (-729.795) -- 0:07:21
172000 -- (-699.973) (-744.588) [-681.075] (-686.360) * (-677.048) [-681.718] (-687.557) (-725.251) -- 0:07:22
173000 -- (-697.598) (-726.760) (-691.229) [-680.787] * (-684.207) (-684.877) [-679.520] (-712.447) -- 0:07:19
174000 -- (-687.391) (-734.353) (-683.976) [-674.836] * [-680.137] (-680.831) (-688.566) (-712.810) -- 0:07:16
175000 -- (-682.431) (-731.705) (-686.484) [-670.911] * (-688.038) (-683.774) [-683.631] (-723.597) -- 0:07:18
Average standard deviation of split frequencies: 0.022645
176000 -- (-681.824) (-730.343) (-698.177) [-678.462] * [-681.444] (-685.372) (-690.555) (-713.901) -- 0:07:15
177000 -- [-677.878] (-730.194) (-694.781) (-677.578) * [-683.948] (-685.706) (-682.224) (-724.309) -- 0:07:17
178000 -- (-681.724) (-740.870) (-683.888) [-685.628] * [-678.877] (-690.070) (-690.184) (-721.150) -- 0:07:14
179000 -- (-684.939) (-737.881) (-678.461) [-694.497] * (-688.862) [-687.951] (-679.221) (-729.626) -- 0:07:15
180000 -- (-687.534) (-739.992) (-683.007) [-690.332] * [-678.880] (-679.952) (-684.951) (-716.802) -- 0:07:12
Average standard deviation of split frequencies: 0.021507
181000 -- (-688.567) (-729.873) [-683.794] (-683.847) * [-689.628] (-681.076) (-680.513) (-730.544) -- 0:07:14
182000 -- (-691.463) (-736.914) [-679.169] (-689.081) * [-679.610] (-681.714) (-687.348) (-714.935) -- 0:07:11
183000 -- [-684.627] (-743.523) (-699.159) (-688.373) * (-688.602) (-681.448) [-683.294] (-721.712) -- 0:07:13
184000 -- (-706.575) (-730.125) (-705.522) [-685.562] * (-685.146) (-685.056) [-684.235] (-729.516) -- 0:07:10
185000 -- (-695.797) (-722.916) (-696.175) [-683.438] * (-676.571) (-685.981) [-686.356] (-721.118) -- 0:07:11
Average standard deviation of split frequencies: 0.021351
186000 -- (-684.255) (-736.804) (-687.057) [-684.758] * (-682.260) [-682.365] (-688.688) (-736.566) -- 0:07:08
187000 -- (-689.136) (-735.147) (-693.970) [-677.263] * (-684.389) (-684.176) [-680.268] (-722.320) -- 0:07:10
188000 -- (-685.724) (-734.934) (-687.201) [-674.693] * [-677.655] (-676.726) (-690.345) (-718.938) -- 0:07:07
189000 -- [-684.133] (-730.870) (-697.897) (-688.662) * (-683.989) [-679.672] (-685.199) (-728.633) -- 0:07:04
190000 -- (-685.122) (-732.531) (-691.665) [-678.234] * (-692.262) (-680.491) [-689.954] (-730.125) -- 0:07:06
Average standard deviation of split frequencies: 0.021015
191000 -- [-688.122] (-743.003) (-686.048) (-694.827) * (-692.706) [-680.525] (-685.542) (-720.145) -- 0:07:03
192000 -- [-685.926] (-737.146) (-682.711) (-695.285) * (-689.116) [-682.940] (-685.912) (-723.276) -- 0:07:05
193000 -- [-684.858] (-731.096) (-678.875) (-690.169) * [-680.707] (-676.021) (-696.759) (-727.669) -- 0:07:02
194000 -- (-690.161) (-734.920) [-677.313] (-688.202) * (-684.908) [-687.932] (-676.594) (-729.664) -- 0:07:03
195000 -- (-697.321) (-735.190) [-682.322] (-681.020) * (-683.183) [-686.516] (-681.703) (-725.486) -- 0:07:01
Average standard deviation of split frequencies: 0.021721
196000 -- [-682.653] (-738.682) (-693.807) (-687.878) * (-684.388) (-689.027) [-679.545] (-728.603) -- 0:07:02
197000 -- (-685.211) (-736.992) (-703.135) [-684.056] * (-682.436) [-681.345] (-677.913) (-725.268) -- 0:06:59
198000 -- (-687.650) (-747.228) (-699.616) [-684.437] * (-680.135) (-684.603) [-681.665] (-718.032) -- 0:07:01
199000 -- (-681.475) (-742.711) (-680.084) [-679.124] * [-682.079] (-702.619) (-691.139) (-717.248) -- 0:06:58
200000 -- [-680.625] (-733.496) (-686.856) (-691.091) * (-677.195) [-681.457] (-683.600) (-739.907) -- 0:07:00
Average standard deviation of split frequencies: 0.021626
201000 -- [-678.877] (-734.287) (-710.874) (-675.887) * [-679.761] (-695.465) (-688.283) (-725.416) -- 0:06:57
202000 -- (-681.612) (-734.893) [-679.843] (-679.104) * (-681.142) [-681.207] (-687.326) (-723.837) -- 0:06:54
203000 -- (-687.358) (-729.263) (-686.873) [-686.760] * (-688.051) [-681.851] (-696.562) (-730.081) -- 0:06:56
204000 -- (-679.107) (-737.238) (-682.124) [-680.415] * (-682.276) [-687.123] (-680.788) (-719.258) -- 0:06:53
205000 -- (-677.878) (-734.604) (-682.879) [-674.087] * [-679.624] (-681.731) (-691.761) (-721.953) -- 0:06:54
Average standard deviation of split frequencies: 0.022052
206000 -- [-681.744] (-730.742) (-683.468) (-684.995) * [-682.541] (-689.615) (-695.835) (-730.801) -- 0:06:52
207000 -- (-681.859) (-742.299) (-682.865) [-683.864] * [-683.591] (-676.090) (-685.320) (-724.880) -- 0:06:53
208000 -- [-682.813] (-726.991) (-696.666) (-678.359) * [-674.676] (-679.979) (-681.221) (-724.573) -- 0:06:51
209000 -- (-681.750) (-727.380) [-679.837] (-680.900) * [-679.758] (-697.983) (-679.875) (-719.610) -- 0:06:52
210000 -- [-679.111] (-732.742) (-680.244) (-695.140) * [-681.505] (-678.805) (-682.382) (-724.141) -- 0:06:50
Average standard deviation of split frequencies: 0.021902
211000 -- [-679.931] (-722.775) (-683.477) (-678.792) * [-682.964] (-685.965) (-678.691) (-729.919) -- 0:06:51
212000 -- (-687.855) (-728.312) (-683.362) [-681.566] * [-683.265] (-688.666) (-678.633) (-730.066) -- 0:06:48
213000 -- (-691.948) (-725.534) [-681.170] (-687.554) * (-693.025) [-685.867] (-682.563) (-737.664) -- 0:06:50
214000 -- (-690.034) (-734.021) [-685.203] (-679.804) * (-689.070) [-690.804] (-683.151) (-728.480) -- 0:06:47
215000 -- [-684.209] (-730.972) (-680.370) (-688.764) * (-683.218) [-694.998] (-682.046) (-713.185) -- 0:06:45
Average standard deviation of split frequencies: 0.019501
216000 -- [-678.299] (-736.844) (-689.569) (-697.661) * (-693.454) (-690.445) [-681.372] (-729.358) -- 0:06:46
217000 -- (-678.180) (-727.812) (-699.033) [-688.980] * (-675.057) (-698.360) [-685.603] (-728.060) -- 0:06:44
218000 -- [-681.768] (-735.868) (-702.632) (-683.415) * [-679.209] (-690.966) (-685.767) (-728.328) -- 0:06:45
219000 -- [-686.969] (-744.479) (-681.583) (-700.184) * (-693.685) (-688.999) [-678.667] (-723.032) -- 0:06:42
220000 -- [-683.366] (-737.568) (-680.802) (-685.680) * (-690.767) (-686.063) [-679.327] (-727.433) -- 0:06:44
Average standard deviation of split frequencies: 0.020467
221000 -- (-681.031) (-742.555) (-683.748) [-687.475] * (-700.669) [-688.132] (-683.286) (-723.105) -- 0:06:41
222000 -- [-680.583] (-734.267) (-687.644) (-686.856) * [-682.972] (-686.589) (-687.275) (-728.992) -- 0:06:43
223000 -- [-684.198] (-736.825) (-680.850) (-688.024) * (-696.616) [-685.018] (-686.339) (-724.534) -- 0:06:40
224000 -- (-690.104) (-727.595) [-687.126] (-700.915) * (-693.229) [-682.011] (-683.830) (-709.000) -- 0:06:41
225000 -- [-685.258] (-735.467) (-702.953) (-688.240) * (-696.428) [-678.843] (-681.331) (-725.308) -- 0:06:39
Average standard deviation of split frequencies: 0.021250
226000 -- [-687.799] (-742.835) (-693.284) (-702.156) * (-694.542) [-679.496] (-688.807) (-726.674) -- 0:06:40
227000 -- [-679.599] (-740.355) (-691.959) (-705.812) * [-686.512] (-679.500) (-693.809) (-711.340) -- 0:06:38
228000 -- [-690.598] (-738.660) (-687.390) (-690.188) * (-686.368) [-683.389] (-688.467) (-723.867) -- 0:06:36
229000 -- [-688.882] (-734.393) (-683.578) (-698.795) * (-690.399) [-682.123] (-687.978) (-719.929) -- 0:06:37
230000 -- (-697.499) (-735.299) [-688.138] (-691.695) * (-689.693) (-685.356) [-682.981] (-719.038) -- 0:06:35
Average standard deviation of split frequencies: 0.020437
231000 -- (-700.538) (-733.452) [-675.004] (-699.454) * [-680.474] (-685.856) (-685.525) (-720.053) -- 0:06:36
232000 -- (-680.439) (-731.402) [-678.999] (-699.008) * (-680.032) [-686.706] (-690.034) (-726.480) -- 0:06:33
233000 -- (-693.715) (-732.693) [-684.002] (-693.683) * (-695.230) [-683.831] (-690.016) (-729.672) -- 0:06:35
234000 -- (-696.121) (-738.819) [-684.326] (-689.340) * (-690.285) [-680.293] (-681.964) (-735.120) -- 0:06:32
235000 -- [-687.899] (-726.409) (-700.651) (-704.729) * (-688.122) [-696.001] (-688.043) (-722.528) -- 0:06:33
Average standard deviation of split frequencies: 0.019846
236000 -- (-681.755) (-727.860) [-678.717] (-695.679) * (-688.864) [-687.638] (-680.480) (-732.308) -- 0:06:31
237000 -- [-680.365] (-736.056) (-689.300) (-692.822) * [-680.397] (-683.833) (-685.389) (-745.010) -- 0:06:32
238000 -- [-681.668] (-731.103) (-690.014) (-695.626) * (-685.910) [-684.769] (-690.122) (-726.508) -- 0:06:30
239000 -- [-677.210] (-723.672) (-686.652) (-682.970) * (-689.350) [-682.365] (-686.263) (-720.263) -- 0:06:31
240000 -- [-688.174] (-739.879) (-676.875) (-700.996) * (-690.624) (-682.833) [-688.254] (-728.055) -- 0:06:29
Average standard deviation of split frequencies: 0.019145
241000 -- [-680.914] (-733.829) (-702.525) (-682.557) * [-682.846] (-679.986) (-686.864) (-726.070) -- 0:06:30
242000 -- (-676.129) (-733.749) [-682.246] (-695.684) * (-677.816) [-677.343] (-689.348) (-723.811) -- 0:06:28
243000 -- (-689.095) (-738.240) (-676.283) [-674.726] * (-685.221) [-681.499] (-687.714) (-725.781) -- 0:06:29
244000 -- (-683.608) (-731.111) (-678.984) [-677.525] * (-684.502) [-679.020] (-689.514) (-730.380) -- 0:06:27
245000 -- [-682.377] (-731.640) (-683.413) (-689.376) * [-678.070] (-679.895) (-684.470) (-720.153) -- 0:06:25
Average standard deviation of split frequencies: 0.018971
246000 -- [-681.093] (-732.683) (-697.965) (-684.770) * [-678.684] (-699.127) (-694.505) (-722.584) -- 0:06:26
247000 -- (-679.733) (-731.447) (-686.015) [-680.326] * [-680.897] (-683.088) (-680.522) (-718.793) -- 0:06:24
248000 -- (-685.679) (-727.257) (-712.519) [-689.901] * (-679.744) (-678.768) [-685.149] (-720.551) -- 0:06:25
249000 -- (-692.457) (-741.006) (-719.250) [-675.314] * (-689.540) (-686.488) [-683.591] (-733.438) -- 0:06:23
250000 -- (-687.005) (-747.655) (-710.990) [-683.999] * (-699.071) [-689.752] (-688.170) (-723.070) -- 0:06:24
Average standard deviation of split frequencies: 0.017866
251000 -- (-678.854) (-731.305) (-715.618) [-679.826] * (-696.908) [-684.120] (-695.954) (-716.655) -- 0:06:21
252000 -- [-675.724] (-733.003) (-707.558) (-682.153) * (-687.530) [-684.443] (-690.676) (-718.262) -- 0:06:22
253000 -- [-676.542] (-742.177) (-715.131) (-682.679) * (-700.040) (-685.576) [-690.318] (-718.245) -- 0:06:20
254000 -- [-686.819] (-730.817) (-711.451) (-674.964) * (-703.583) (-684.395) [-680.512] (-726.218) -- 0:06:21
255000 -- [-682.713] (-743.863) (-720.094) (-682.656) * (-685.361) [-679.399] (-679.505) (-723.994) -- 0:06:19
Average standard deviation of split frequencies: 0.017555
256000 -- [-683.204] (-737.175) (-711.670) (-684.334) * (-681.897) (-689.498) [-685.465] (-724.038) -- 0:06:20
257000 -- (-700.108) (-737.880) (-713.785) [-684.922] * (-684.895) (-687.821) [-678.615] (-740.231) -- 0:06:18
258000 -- (-692.207) (-736.262) (-714.503) [-681.596] * (-697.683) [-687.861] (-686.104) (-737.407) -- 0:06:19
259000 -- (-687.176) (-734.500) (-706.207) [-682.905] * (-697.819) (-682.385) [-679.113] (-722.809) -- 0:06:17
260000 -- (-684.080) (-735.084) (-712.397) [-676.986] * (-679.372) (-685.251) [-676.872] (-721.684) -- 0:06:15
Average standard deviation of split frequencies: 0.016336
261000 -- [-683.122] (-738.972) (-717.807) (-684.889) * (-697.910) [-676.318] (-693.300) (-725.823) -- 0:06:16
262000 -- (-695.748) (-728.881) (-720.314) [-678.757] * (-686.732) [-677.347] (-684.904) (-726.560) -- 0:06:14
263000 -- (-682.613) (-729.867) (-721.353) [-681.361] * (-683.425) [-674.135] (-695.877) (-724.906) -- 0:06:15
264000 -- (-678.561) (-733.639) (-729.068) [-686.304] * (-692.405) [-678.931] (-681.239) (-727.050) -- 0:06:13
265000 -- [-693.866] (-739.595) (-720.722) (-683.099) * (-676.124) [-672.349] (-690.696) (-728.224) -- 0:06:14
Average standard deviation of split frequencies: 0.016422
266000 -- (-676.125) (-737.065) (-728.678) [-678.175] * (-692.066) [-677.280] (-681.703) (-732.769) -- 0:06:12
267000 -- [-688.740] (-733.327) (-719.866) (-685.955) * (-686.516) [-687.705] (-703.736) (-728.544) -- 0:06:13
268000 -- [-681.634] (-732.335) (-729.378) (-685.219) * [-681.529] (-685.059) (-681.076) (-732.087) -- 0:06:11
269000 -- (-677.034) (-731.769) (-716.308) [-687.404] * (-684.262) (-703.565) [-677.061] (-718.356) -- 0:06:12
270000 -- [-684.624] (-731.222) (-713.744) (-685.721) * [-682.629] (-698.021) (-681.035) (-722.247) -- 0:06:10
Average standard deviation of split frequencies: 0.015956
271000 -- [-676.576] (-755.154) (-709.044) (-694.165) * (-679.868) (-692.860) [-678.723] (-724.481) -- 0:06:11
272000 -- [-672.746] (-737.107) (-712.038) (-688.350) * [-679.276] (-692.689) (-679.586) (-730.671) -- 0:06:09
273000 -- (-688.435) (-739.646) (-715.580) [-674.652] * (-677.528) (-699.093) [-680.880] (-731.234) -- 0:06:07
274000 -- (-688.773) (-733.454) (-711.746) [-683.057] * (-678.816) (-682.295) [-678.678] (-728.934) -- 0:06:08
275000 -- (-675.406) (-740.198) (-718.960) [-683.115] * (-687.287) (-695.168) [-691.531] (-724.395) -- 0:06:06
Average standard deviation of split frequencies: 0.016333
276000 -- (-683.759) (-724.625) (-720.992) [-683.208] * (-680.615) (-690.375) [-681.986] (-732.086) -- 0:06:07
277000 -- (-684.889) (-738.808) (-718.020) [-685.436] * [-678.488] (-684.242) (-683.901) (-726.660) -- 0:06:05
278000 -- [-674.563] (-734.957) (-734.785) (-681.293) * [-677.161] (-693.388) (-690.402) (-718.952) -- 0:06:06
279000 -- [-680.560] (-733.063) (-716.349) (-690.056) * [-679.969] (-686.332) (-677.265) (-730.737) -- 0:06:04
280000 -- (-683.094) (-738.446) (-719.681) [-680.238] * [-673.880] (-689.578) (-682.111) (-718.322) -- 0:06:05
Average standard deviation of split frequencies: 0.016742
281000 -- [-684.652] (-742.068) (-721.760) (-682.724) * (-682.562) [-683.905] (-726.081) (-738.413) -- 0:06:03
282000 -- (-688.855) (-728.617) (-719.795) [-687.765] * [-683.044] (-693.695) (-721.079) (-729.582) -- 0:06:04
283000 -- [-683.880] (-730.260) (-712.516) (-676.242) * (-675.035) [-686.273] (-723.538) (-723.441) -- 0:06:02
284000 -- [-676.541] (-742.484) (-721.523) (-676.259) * [-686.646] (-684.225) (-716.100) (-725.305) -- 0:06:03
285000 -- (-680.987) (-744.450) (-714.588) [-679.687] * [-683.531] (-677.275) (-730.255) (-717.735) -- 0:06:01
Average standard deviation of split frequencies: 0.015143
286000 -- [-678.932] (-742.808) (-712.140) (-685.016) * [-675.533] (-680.523) (-733.027) (-743.038) -- 0:05:59
287000 -- (-685.013) (-736.459) (-718.395) [-686.797] * (-691.737) [-677.914] (-733.037) (-731.088) -- 0:06:00
288000 -- (-686.736) (-734.812) (-722.992) [-678.659] * (-677.360) [-681.655] (-721.908) (-728.660) -- 0:05:58
289000 -- (-681.892) (-726.925) (-712.094) [-681.213] * [-678.072] (-681.454) (-734.968) (-724.585) -- 0:05:59
290000 -- (-686.497) (-727.234) (-715.271) [-688.202] * [-679.359] (-681.363) (-719.291) (-719.278) -- 0:05:57
Average standard deviation of split frequencies: 0.015029
291000 -- [-683.078] (-732.460) (-724.998) (-692.174) * (-681.906) [-683.656] (-721.569) (-728.322) -- 0:05:58
292000 -- (-686.313) (-738.826) (-724.645) [-680.027] * (-689.581) [-672.294] (-724.848) (-726.533) -- 0:05:56
293000 -- (-678.513) (-741.084) (-712.403) [-681.075] * [-684.834] (-686.420) (-724.312) (-720.418) -- 0:05:57
294000 -- [-683.860] (-736.395) (-714.147) (-681.674) * (-684.797) [-680.785] (-728.280) (-728.142) -- 0:05:55
295000 -- (-681.598) (-739.215) (-715.122) [-684.120] * [-682.452] (-683.291) (-721.946) (-721.760) -- 0:05:56
Average standard deviation of split frequencies: 0.014333
296000 -- (-683.163) (-737.665) (-717.976) [-678.955] * (-689.001) [-678.289] (-726.244) (-715.258) -- 0:05:54
297000 -- [-675.544] (-739.653) (-715.887) (-691.415) * (-676.961) [-691.368] (-730.421) (-724.094) -- 0:05:52
298000 -- [-677.711] (-734.629) (-723.369) (-688.244) * (-676.621) [-682.901] (-727.053) (-716.409) -- 0:05:53
299000 -- [-678.556] (-736.972) (-719.007) (-683.655) * (-676.270) [-672.953] (-732.291) (-731.932) -- 0:05:51
300000 -- [-678.578] (-735.466) (-715.462) (-681.732) * [-681.556] (-684.912) (-721.178) (-723.597) -- 0:05:52
Average standard deviation of split frequencies: 0.012759
301000 -- [-679.591] (-733.007) (-709.284) (-681.252) * [-684.715] (-680.107) (-725.966) (-720.140) -- 0:05:50
302000 -- [-674.060] (-732.158) (-716.437) (-685.377) * [-686.321] (-682.282) (-723.442) (-725.287) -- 0:05:51
303000 -- [-682.506] (-736.564) (-719.339) (-687.402) * [-684.666] (-688.496) (-718.537) (-728.549) -- 0:05:49
304000 -- (-681.145) (-733.586) (-731.228) [-681.058] * [-678.005] (-676.762) (-728.346) (-721.701) -- 0:05:50
305000 -- (-682.042) (-738.166) (-724.348) [-682.438] * [-677.800] (-678.670) (-716.559) (-724.654) -- 0:05:48
Average standard deviation of split frequencies: 0.014327
306000 -- (-683.583) (-729.513) (-722.532) [-686.934] * [-686.505] (-681.211) (-720.827) (-726.932) -- 0:05:49
307000 -- [-682.168] (-734.084) (-729.025) (-691.854) * (-689.184) [-674.875] (-715.853) (-721.121) -- 0:05:47
308000 -- (-695.959) (-735.617) (-724.713) [-681.768] * [-691.216] (-678.388) (-715.172) (-726.925) -- 0:05:46
309000 -- (-692.591) (-739.644) (-720.364) [-682.924] * (-681.012) [-683.784] (-726.924) (-716.040) -- 0:05:46
310000 -- (-689.749) (-739.860) (-716.347) [-677.105] * (-691.102) [-678.271] (-727.192) (-728.769) -- 0:05:45
Average standard deviation of split frequencies: 0.013290
311000 -- (-690.099) (-731.047) (-727.706) [-684.307] * (-683.407) [-678.708] (-726.070) (-719.104) -- 0:05:45
312000 -- (-689.425) (-739.657) (-725.503) [-676.560] * [-682.580] (-681.816) (-724.645) (-724.319) -- 0:05:44
313000 -- [-681.501] (-733.654) (-718.213) (-682.647) * [-679.280] (-682.104) (-725.781) (-728.290) -- 0:05:44
314000 -- (-686.557) (-740.548) (-716.387) [-671.499] * [-679.058] (-683.775) (-730.880) (-733.155) -- 0:05:45
315000 -- [-678.299] (-736.879) (-710.283) (-684.106) * (-685.963) [-681.338] (-721.011) (-724.503) -- 0:05:43
Average standard deviation of split frequencies: 0.013375
316000 -- [-681.849] (-749.135) (-719.677) (-677.199) * [-676.261] (-678.993) (-718.159) (-717.751) -- 0:05:44
317000 -- (-678.925) (-737.712) (-715.470) [-681.941] * [-675.215] (-685.391) (-728.838) (-717.912) -- 0:05:44
318000 -- (-687.197) (-743.955) (-712.680) [-685.269] * (-679.137) [-681.667] (-722.802) (-717.885) -- 0:05:43
319000 -- (-687.081) (-732.387) (-709.142) [-684.656] * (-687.798) [-678.282] (-719.742) (-729.955) -- 0:05:43
320000 -- [-682.053] (-737.984) (-716.149) (-683.088) * (-685.757) [-678.750] (-724.616) (-714.423) -- 0:05:44
Average standard deviation of split frequencies: 0.013839
321000 -- (-692.207) (-730.944) (-719.259) [-681.011] * [-687.723] (-683.982) (-724.316) (-720.729) -- 0:05:42
322000 -- [-675.263] (-736.504) (-720.405) (-685.096) * [-694.315] (-692.654) (-721.455) (-730.625) -- 0:05:43
323000 -- [-679.562] (-731.711) (-722.035) (-684.392) * (-692.899) [-683.250] (-726.229) (-728.165) -- 0:05:43
324000 -- (-684.992) (-734.881) (-728.037) [-684.008] * (-690.592) [-683.721] (-730.873) (-711.123) -- 0:05:42
325000 -- (-682.170) (-733.611) (-714.740) [-685.490] * (-694.362) [-673.702] (-723.315) (-716.714) -- 0:05:42
Average standard deviation of split frequencies: 0.015039
326000 -- (-677.977) (-740.666) (-728.261) [-681.060] * [-684.887] (-688.210) (-718.287) (-726.116) -- 0:05:43
327000 -- [-677.345] (-742.745) (-728.165) (-674.551) * (-687.053) [-689.011] (-715.634) (-718.773) -- 0:05:43
328000 -- [-681.757] (-747.649) (-723.818) (-687.983) * (-679.656) [-679.231] (-722.792) (-728.515) -- 0:05:42
329000 -- (-676.034) (-743.112) (-706.577) [-675.501] * (-680.080) [-681.411] (-720.510) (-719.108) -- 0:05:42
330000 -- [-682.154] (-724.083) (-723.566) (-675.737) * [-681.237] (-697.433) (-717.787) (-724.862) -- 0:05:43
Average standard deviation of split frequencies: 0.014874
331000 -- (-679.938) (-725.289) (-723.187) [-685.392] * [-680.052] (-682.470) (-722.271) (-713.161) -- 0:05:41
332000 -- [-687.178] (-730.191) (-722.280) (-688.714) * [-681.249] (-680.310) (-729.611) (-716.746) -- 0:05:42
333000 -- (-679.603) (-742.071) (-716.085) [-680.234] * [-676.696] (-686.997) (-732.887) (-724.101) -- 0:05:42
334000 -- [-679.028] (-727.547) (-722.491) (-682.380) * [-687.679] (-687.078) (-725.842) (-720.746) -- 0:05:40
335000 -- [-674.156] (-742.292) (-711.971) (-688.054) * [-682.578] (-685.143) (-716.778) (-729.839) -- 0:05:41
Average standard deviation of split frequencies: 0.014825
336000 -- [-677.105] (-730.446) (-717.404) (-688.219) * (-681.275) [-680.604] (-728.590) (-714.544) -- 0:05:41
337000 -- [-679.975] (-734.088) (-717.005) (-684.526) * [-678.609] (-684.558) (-733.367) (-718.698) -- 0:05:40
338000 -- (-679.876) (-745.030) (-723.546) [-675.391] * (-675.282) [-684.591] (-724.111) (-719.772) -- 0:05:40
339000 -- (-680.784) (-739.894) (-720.573) [-678.348] * [-676.829] (-677.657) (-723.883) (-723.944) -- 0:05:41
340000 -- [-690.220] (-745.556) (-719.184) (-683.176) * [-683.744] (-685.056) (-723.782) (-718.894) -- 0:05:39
Average standard deviation of split frequencies: 0.012645
341000 -- [-688.449] (-734.206) (-718.577) (-690.996) * (-687.305) [-680.257] (-729.775) (-730.964) -- 0:05:40
342000 -- [-678.938] (-732.790) (-712.586) (-701.245) * [-683.276] (-684.633) (-721.935) (-717.124) -- 0:05:40
343000 -- [-681.947] (-732.035) (-717.404) (-686.029) * [-680.356] (-687.310) (-728.875) (-718.665) -- 0:05:40
344000 -- (-687.922) (-736.414) (-717.010) [-680.492] * [-679.081] (-688.574) (-724.639) (-725.943) -- 0:05:39
345000 -- (-692.490) (-729.791) (-715.771) [-689.669] * (-684.675) [-684.313] (-724.957) (-738.778) -- 0:05:39
Average standard deviation of split frequencies: 0.012403
346000 -- (-687.439) (-739.124) (-718.651) [-682.098] * (-679.754) [-683.019] (-724.065) (-738.160) -- 0:05:40
347000 -- [-677.918] (-731.571) (-719.539) (-685.608) * (-680.599) [-682.220] (-723.614) (-729.672) -- 0:05:38
348000 -- [-679.775] (-748.551) (-713.371) (-685.965) * (-677.755) [-677.853] (-719.573) (-737.108) -- 0:05:39
349000 -- [-677.636] (-726.130) (-717.629) (-688.492) * [-673.031] (-687.727) (-719.639) (-725.924) -- 0:05:39
350000 -- [-674.692] (-736.987) (-717.041) (-679.503) * (-680.164) [-681.606] (-725.248) (-722.970) -- 0:05:37
Average standard deviation of split frequencies: 0.012516
351000 -- [-688.686] (-733.330) (-720.452) (-673.904) * [-681.453] (-679.739) (-720.826) (-713.347) -- 0:05:38
352000 -- (-689.497) (-736.423) (-725.211) [-675.890] * (-690.800) [-683.218] (-721.606) (-719.188) -- 0:05:38
353000 -- [-686.251] (-731.325) (-713.308) (-690.001) * [-676.139] (-683.354) (-721.323) (-718.395) -- 0:05:39
354000 -- [-694.728] (-731.931) (-717.186) (-679.949) * (-680.298) [-682.985] (-722.750) (-723.276) -- 0:05:37
355000 -- [-678.907] (-730.598) (-726.599) (-680.017) * [-681.958] (-683.060) (-725.090) (-728.971) -- 0:05:37
Average standard deviation of split frequencies: 0.012343
356000 -- [-684.856] (-736.580) (-718.630) (-678.813) * [-677.978] (-688.483) (-719.117) (-731.994) -- 0:05:38
357000 -- [-678.243] (-742.605) (-715.690) (-690.350) * [-679.055] (-688.330) (-727.770) (-720.973) -- 0:05:36
358000 -- [-677.556] (-739.017) (-720.261) (-683.543) * [-686.216] (-680.896) (-728.168) (-721.257) -- 0:05:37
359000 -- [-677.716] (-734.324) (-715.241) (-687.030) * [-672.309] (-697.367) (-712.571) (-724.111) -- 0:05:37
360000 -- [-681.756] (-729.835) (-714.985) (-684.396) * [-673.202] (-679.312) (-722.703) (-723.513) -- 0:05:36
Average standard deviation of split frequencies: 0.013882
361000 -- (-677.460) (-749.075) (-721.726) [-682.094] * [-687.406] (-688.372) (-720.752) (-718.291) -- 0:05:36
362000 -- [-682.224] (-735.583) (-712.670) (-688.143) * (-677.671) [-679.740] (-718.631) (-711.644) -- 0:05:36
363000 -- [-686.311] (-735.525) (-720.194) (-690.824) * (-687.449) [-678.072] (-719.041) (-727.886) -- 0:05:35
364000 -- [-681.770] (-729.863) (-716.579) (-683.146) * [-685.940] (-678.710) (-720.202) (-718.606) -- 0:05:35
365000 -- (-689.707) (-724.912) (-719.432) [-679.472] * (-679.766) [-680.585] (-725.880) (-733.023) -- 0:05:34
Average standard deviation of split frequencies: 0.014468
366000 -- [-697.712] (-736.868) (-718.717) (-685.842) * (-682.229) [-681.040] (-720.903) (-741.752) -- 0:05:34
367000 -- [-686.648] (-740.248) (-716.026) (-677.562) * (-689.250) [-677.225] (-729.998) (-723.025) -- 0:05:32
368000 -- (-683.451) (-729.922) (-721.671) [-675.987] * (-687.442) [-681.033] (-722.911) (-721.574) -- 0:05:33
369000 -- [-677.056] (-726.804) (-712.125) (-685.608) * (-692.720) [-682.328] (-726.352) (-738.036) -- 0:05:31
370000 -- [-685.987] (-730.739) (-722.890) (-685.703) * [-681.744] (-689.695) (-722.889) (-720.485) -- 0:05:32
Average standard deviation of split frequencies: 0.012718
371000 -- [-692.656] (-732.594) (-714.777) (-685.355) * (-679.401) [-674.057] (-722.382) (-724.186) -- 0:05:30
372000 -- (-685.315) (-740.686) (-713.004) [-674.906] * (-687.609) [-675.823] (-729.492) (-723.614) -- 0:05:29
373000 -- (-687.694) (-739.810) (-714.390) [-694.819] * [-678.312] (-679.980) (-714.432) (-728.977) -- 0:05:29
374000 -- (-687.357) (-737.969) (-731.860) [-686.821] * [-675.655] (-680.418) (-718.626) (-718.014) -- 0:05:28
375000 -- [-690.631] (-728.472) (-715.690) (-689.475) * (-683.480) [-681.725] (-723.585) (-718.159) -- 0:05:28
Average standard deviation of split frequencies: 0.013229
376000 -- (-694.379) (-731.250) (-722.203) [-679.105] * [-679.282] (-686.374) (-727.442) (-727.629) -- 0:05:26
377000 -- (-693.552) (-738.923) (-711.123) [-680.585] * [-684.389] (-692.316) (-731.150) (-722.309) -- 0:05:27
378000 -- (-689.324) (-741.178) (-718.049) [-680.775] * [-680.378] (-679.810) (-729.527) (-714.324) -- 0:05:25
379000 -- [-682.741] (-741.344) (-707.655) (-675.211) * [-682.421] (-685.455) (-724.849) (-726.444) -- 0:05:26
380000 -- [-677.846] (-736.965) (-718.243) (-682.178) * [-679.689] (-676.946) (-717.346) (-718.633) -- 0:05:24
Average standard deviation of split frequencies: 0.013047
381000 -- (-683.806) (-732.049) (-710.340) [-682.034] * [-674.224] (-682.071) (-719.865) (-718.852) -- 0:05:23
382000 -- (-685.926) (-729.654) (-722.472) [-686.154] * (-682.611) [-682.664] (-724.665) (-719.321) -- 0:05:23
383000 -- [-682.595] (-735.893) (-715.736) (-692.886) * [-681.304] (-683.780) (-728.006) (-724.562) -- 0:05:22
384000 -- (-700.116) (-735.826) (-718.513) [-678.953] * (-686.049) [-691.070] (-726.306) (-730.963) -- 0:05:22
385000 -- (-689.256) (-732.894) (-718.213) [-683.411] * (-687.071) [-685.340] (-728.890) (-722.157) -- 0:05:21
Average standard deviation of split frequencies: 0.014248
386000 -- (-687.617) (-731.614) (-716.528) [-685.038] * [-682.101] (-684.737) (-718.178) (-711.990) -- 0:05:21
387000 -- [-690.300] (-734.663) (-735.326) (-691.084) * (-688.172) [-670.540] (-736.975) (-717.067) -- 0:05:19
388000 -- [-687.238] (-724.435) (-729.630) (-694.902) * [-682.389] (-685.109) (-723.304) (-721.823) -- 0:05:20
389000 -- [-682.880] (-725.558) (-720.070) (-691.306) * [-681.987] (-684.805) (-721.915) (-720.746) -- 0:05:18
390000 -- [-681.151] (-735.650) (-719.691) (-699.164) * (-688.903) [-677.579] (-725.296) (-706.996) -- 0:05:19
Average standard deviation of split frequencies: 0.014078
391000 -- [-676.366] (-731.413) (-711.523) (-692.762) * [-689.365] (-681.090) (-718.936) (-725.473) -- 0:05:17
392000 -- [-675.097] (-734.694) (-710.451) (-690.431) * [-677.266] (-677.494) (-720.399) (-733.262) -- 0:05:16
393000 -- [-683.673] (-744.045) (-715.325) (-676.505) * (-681.667) [-685.872] (-727.047) (-723.748) -- 0:05:16
394000 -- [-686.527] (-737.424) (-716.859) (-681.056) * (-687.526) [-682.696] (-719.327) (-719.930) -- 0:05:15
395000 -- [-681.999] (-731.684) (-709.302) (-686.816) * (-685.873) [-686.469] (-723.926) (-731.075) -- 0:05:15
Average standard deviation of split frequencies: 0.012971
396000 -- [-678.737] (-737.796) (-721.111) (-675.811) * (-691.976) [-691.848] (-713.412) (-723.643) -- 0:05:14
397000 -- [-680.449] (-731.492) (-718.710) (-684.434) * (-683.269) [-678.542] (-722.804) (-725.508) -- 0:05:14
398000 -- (-682.409) (-736.944) (-711.384) [-683.660] * [-687.078] (-685.766) (-725.033) (-728.722) -- 0:05:14
399000 -- (-680.604) (-757.390) (-713.581) [-681.132] * (-684.321) [-679.537] (-726.557) (-717.434) -- 0:05:13
400000 -- [-681.239] (-741.615) (-722.013) (-688.328) * [-687.732] (-678.552) (-727.282) (-725.979) -- 0:05:13
Average standard deviation of split frequencies: 0.013388
401000 -- (-683.644) (-736.826) (-714.249) [-685.569] * (-680.384) [-687.842] (-718.644) (-721.396) -- 0:05:13
402000 -- [-681.283] (-732.152) (-719.881) (-688.983) * (-682.619) [-683.689] (-719.923) (-728.774) -- 0:05:13
403000 -- (-683.872) (-730.561) (-722.121) [-677.365] * [-683.212] (-680.791) (-712.458) (-725.081) -- 0:05:12
404000 -- [-675.183] (-727.143) (-712.630) (-685.089) * (-693.013) [-672.507] (-724.254) (-718.213) -- 0:05:12
405000 -- [-677.122] (-734.032) (-720.897) (-679.084) * (-691.324) [-686.227] (-730.061) (-721.076) -- 0:05:12
Average standard deviation of split frequencies: 0.012772
406000 -- [-676.066] (-732.584) (-710.851) (-686.452) * (-689.932) [-674.840] (-721.091) (-720.025) -- 0:05:11
407000 -- [-684.634] (-738.532) (-712.163) (-683.576) * (-695.026) [-680.024] (-724.716) (-719.544) -- 0:05:11
408000 -- (-680.323) (-729.159) (-717.105) [-673.753] * (-691.776) [-678.589] (-730.894) (-715.461) -- 0:05:11
409000 -- [-685.878] (-738.661) (-718.738) (-684.372) * (-681.673) [-679.012] (-720.883) (-717.487) -- 0:05:12
410000 -- [-689.399] (-736.399) (-724.507) (-694.501) * (-683.758) [-675.069] (-725.309) (-718.518) -- 0:05:10
Average standard deviation of split frequencies: 0.012429
411000 -- [-679.297] (-737.217) (-711.427) (-688.887) * (-681.616) [-674.105] (-718.619) (-723.187) -- 0:05:10
412000 -- [-688.195] (-740.876) (-718.413) (-686.214) * [-680.104] (-684.525) (-716.001) (-725.649) -- 0:05:11
413000 -- [-685.243] (-739.048) (-720.240) (-691.558) * (-695.169) [-691.915] (-718.667) (-712.782) -- 0:05:09
414000 -- (-679.575) (-731.032) (-725.408) [-674.290] * (-683.453) [-681.230] (-720.437) (-722.111) -- 0:05:08
415000 -- (-680.088) (-736.957) (-729.493) [-680.894] * [-683.042] (-683.380) (-724.451) (-734.506) -- 0:05:08
Average standard deviation of split frequencies: 0.012699
416000 -- (-683.992) (-731.662) (-722.105) [-684.680] * (-688.314) [-684.198] (-716.638) (-721.393) -- 0:05:07
417000 -- (-684.892) (-742.592) (-712.251) [-684.504] * [-682.952] (-684.299) (-728.627) (-715.488) -- 0:05:07
418000 -- [-677.714] (-732.110) (-716.375) (-684.983) * [-686.005] (-682.564) (-722.313) (-713.964) -- 0:05:06
419000 -- (-690.391) (-737.342) (-708.844) [-672.815] * [-678.925] (-687.826) (-730.329) (-729.009) -- 0:05:06
420000 -- (-688.789) (-741.470) (-712.680) [-688.577] * (-679.347) [-678.343] (-731.671) (-728.549) -- 0:05:05
Average standard deviation of split frequencies: 0.012559
421000 -- (-686.620) (-730.397) (-719.478) [-679.368] * (-698.291) [-690.051] (-723.507) (-730.443) -- 0:05:05
422000 -- (-688.320) (-743.001) (-714.724) [-687.470] * (-685.230) [-680.461] (-725.835) (-718.402) -- 0:05:04
423000 -- (-683.327) (-729.587) (-722.468) [-682.635] * (-693.377) [-680.887] (-725.443) (-728.975) -- 0:05:04
424000 -- (-683.019) (-724.715) (-717.964) [-678.905] * (-679.623) [-680.689] (-715.603) (-729.103) -- 0:05:02
425000 -- (-682.730) (-733.290) (-716.232) [-681.392] * [-683.049] (-689.056) (-726.184) (-735.221) -- 0:05:01
Average standard deviation of split frequencies: 0.012020
426000 -- (-688.027) (-737.876) (-712.741) [-681.555] * [-681.911] (-685.887) (-714.628) (-726.789) -- 0:05:01
427000 -- [-685.514] (-741.675) (-718.235) (-681.354) * (-679.661) [-684.891] (-737.201) (-720.110) -- 0:05:00
428000 -- [-683.009] (-732.763) (-716.698) (-683.923) * (-678.521) [-685.690] (-727.420) (-733.500) -- 0:05:00
429000 -- (-678.314) (-750.784) (-719.251) [-683.847] * [-671.973] (-686.499) (-720.980) (-718.749) -- 0:04:59
430000 -- [-675.948] (-744.146) (-715.319) (-691.775) * (-681.822) [-689.265] (-719.362) (-726.091) -- 0:04:59
Average standard deviation of split frequencies: 0.011588
431000 -- [-687.331] (-734.401) (-723.467) (-682.899) * (-687.827) [-687.068] (-714.589) (-727.800) -- 0:04:59
432000 -- (-679.395) (-730.464) (-716.772) [-697.458] * [-678.817] (-687.957) (-722.321) (-722.244) -- 0:04:58
433000 -- [-680.159] (-733.651) (-728.604) (-686.265) * (-690.103) [-671.115] (-732.908) (-721.448) -- 0:04:58
434000 -- (-688.711) (-725.982) (-722.813) [-680.220] * (-682.539) [-683.575] (-726.709) (-726.097) -- 0:04:57
435000 -- (-683.905) (-733.110) (-716.356) [-680.128] * [-678.485] (-688.889) (-734.368) (-728.069) -- 0:04:57
Average standard deviation of split frequencies: 0.011222
436000 -- (-684.019) (-737.562) (-710.388) [-680.527] * (-683.810) [-684.862] (-724.832) (-722.408) -- 0:04:56
437000 -- (-676.442) (-725.540) (-720.500) [-678.986] * (-681.010) [-679.415] (-725.149) (-719.458) -- 0:04:56
438000 -- (-684.570) (-729.201) (-713.646) [-677.163] * [-679.821] (-684.402) (-723.183) (-727.916) -- 0:04:55
439000 -- (-688.776) (-742.215) (-711.765) [-682.944] * [-683.137] (-694.043) (-722.539) (-725.164) -- 0:04:55
440000 -- [-684.154] (-738.116) (-727.846) (-688.134) * (-684.478) [-682.962] (-716.804) (-729.255) -- 0:04:54
Average standard deviation of split frequencies: 0.010882
441000 -- [-677.065] (-731.522) (-712.446) (-681.640) * [-690.588] (-691.325) (-723.884) (-728.426) -- 0:04:54
442000 -- [-678.101] (-729.410) (-706.350) (-685.492) * [-683.372] (-684.546) (-726.549) (-722.137) -- 0:04:52
443000 -- (-680.361) (-732.973) (-708.106) [-682.081] * (-691.935) [-685.157] (-729.295) (-722.986) -- 0:04:51
444000 -- (-682.128) (-734.121) (-722.237) [-678.098] * [-684.111] (-683.802) (-721.849) (-718.694) -- 0:04:51
445000 -- (-694.644) (-742.601) (-723.879) [-682.663] * [-677.199] (-689.905) (-717.886) (-721.007) -- 0:04:50
Average standard deviation of split frequencies: 0.010715
446000 -- (-687.596) (-730.556) (-706.038) [-685.084] * (-684.553) [-682.685] (-720.707) (-726.897) -- 0:04:50
447000 -- (-680.205) (-735.144) (-723.619) [-685.047] * (-696.964) [-683.585] (-727.212) (-722.698) -- 0:04:49
448000 -- (-683.649) (-731.251) (-719.927) [-677.288] * [-686.210] (-681.995) (-714.598) (-727.579) -- 0:04:49
449000 -- [-680.820] (-731.588) (-710.675) (-675.958) * (-689.108) [-681.506] (-720.493) (-718.770) -- 0:04:48
450000 -- (-695.801) (-742.687) (-714.436) [-681.761] * (-681.746) [-675.380] (-731.943) (-725.278) -- 0:04:48
Average standard deviation of split frequencies: 0.010424
451000 -- (-682.719) (-743.381) (-709.981) [-683.085] * (-683.198) [-679.898] (-728.431) (-727.413) -- 0:04:47
452000 -- [-686.740] (-737.515) (-720.913) (-677.010) * [-685.757] (-685.508) (-722.615) (-726.947) -- 0:04:47
453000 -- [-685.762] (-744.271) (-711.442) (-687.674) * (-683.637) [-679.212] (-717.939) (-710.443) -- 0:04:46
454000 -- [-676.453] (-741.671) (-724.133) (-680.017) * (-680.837) [-680.889] (-729.785) (-715.742) -- 0:04:45
455000 -- (-682.120) (-740.222) (-706.263) [-685.722] * [-679.687] (-676.450) (-724.021) (-724.602) -- 0:04:45
Average standard deviation of split frequencies: 0.010088
456000 -- [-682.544] (-742.418) (-716.515) (-676.123) * [-683.799] (-679.532) (-732.665) (-729.699) -- 0:04:43
457000 -- (-698.056) (-738.932) (-718.743) [-683.961] * [-680.014] (-679.223) (-718.034) (-721.740) -- 0:04:43
458000 -- (-696.844) (-743.874) (-714.803) [-684.547] * (-692.926) [-683.978] (-727.071) (-730.278) -- 0:04:42
459000 -- [-689.961] (-741.699) (-718.395) (-685.969) * [-683.813] (-681.785) (-720.838) (-730.693) -- 0:04:42
460000 -- [-683.877] (-727.768) (-725.907) (-696.565) * [-683.797] (-684.791) (-730.627) (-724.741) -- 0:04:41
Average standard deviation of split frequencies: 0.010268
461000 -- [-686.268] (-735.276) (-715.950) (-689.533) * (-685.730) [-681.292] (-719.609) (-717.625) -- 0:04:41
462000 -- [-680.873] (-729.480) (-714.934) (-690.503) * [-688.219] (-685.329) (-716.310) (-730.433) -- 0:04:40
463000 -- [-681.787] (-735.292) (-720.445) (-681.878) * [-687.458] (-700.021) (-729.639) (-736.316) -- 0:04:40
464000 -- [-678.749] (-735.246) (-713.605) (-687.706) * (-682.375) [-695.207] (-725.665) (-722.834) -- 0:04:39
465000 -- [-686.427] (-730.538) (-715.570) (-674.848) * [-679.822] (-688.480) (-724.955) (-715.857) -- 0:04:38
Average standard deviation of split frequencies: 0.009663
466000 -- (-682.952) (-728.566) (-720.394) [-680.386] * (-686.572) [-693.333] (-727.533) (-728.785) -- 0:04:38
467000 -- [-680.599] (-739.847) (-714.569) (-683.457) * [-676.631] (-689.395) (-726.187) (-721.591) -- 0:04:37
468000 -- (-681.698) (-741.095) (-715.234) [-678.173] * [-686.602] (-684.466) (-713.308) (-727.771) -- 0:04:37
469000 -- (-687.140) (-728.004) (-719.217) [-682.809] * (-692.620) [-683.012] (-721.033) (-726.825) -- 0:04:36
470000 -- (-673.996) (-730.746) (-711.723) [-681.313] * [-685.329] (-686.870) (-720.150) (-721.661) -- 0:04:36
Average standard deviation of split frequencies: 0.009774
471000 -- (-683.550) (-741.057) (-717.639) [-680.434] * [-675.364] (-685.634) (-723.514) (-725.272) -- 0:04:35
472000 -- [-684.365] (-746.306) (-711.774) (-681.917) * [-673.851] (-684.965) (-717.307) (-720.513) -- 0:04:35
473000 -- (-685.398) (-743.130) (-725.017) [-678.943] * [-676.233] (-686.987) (-732.044) (-723.574) -- 0:04:34
474000 -- [-684.112] (-746.722) (-723.764) (-682.071) * (-682.833) [-676.608] (-721.850) (-723.181) -- 0:04:34
475000 -- (-688.876) (-753.657) (-713.495) [-686.950] * [-675.249] (-687.341) (-720.091) (-728.073) -- 0:04:33
Average standard deviation of split frequencies: 0.009699
476000 -- (-679.854) (-748.821) (-711.801) [-687.478] * (-685.219) [-682.551] (-724.317) (-723.835) -- 0:04:31
477000 -- [-677.772] (-731.176) (-717.682) (-689.055) * [-675.718] (-689.107) (-725.846) (-730.517) -- 0:04:31
478000 -- (-686.275) (-739.077) (-718.744) [-682.954] * (-673.542) [-678.549] (-720.087) (-721.746) -- 0:04:30
479000 -- [-674.577] (-739.651) (-720.906) (-686.075) * [-679.287] (-680.990) (-724.797) (-722.184) -- 0:04:30
480000 -- (-682.655) (-732.726) (-717.447) [-673.539] * (-676.574) [-679.054] (-723.608) (-718.256) -- 0:04:29
Average standard deviation of split frequencies: 0.010473
481000 -- [-678.647] (-727.509) (-722.379) (-687.777) * [-673.437] (-689.783) (-723.587) (-720.707) -- 0:04:29
482000 -- [-680.044] (-740.418) (-721.819) (-682.837) * [-681.008] (-685.193) (-718.448) (-715.608) -- 0:04:28
483000 -- [-680.168] (-755.912) (-717.182) (-683.002) * (-690.699) [-680.365] (-721.622) (-722.362) -- 0:04:28
484000 -- [-686.683] (-745.044) (-713.182) (-681.184) * (-688.446) [-675.775] (-716.135) (-724.963) -- 0:04:27
485000 -- (-685.154) (-754.817) (-727.973) [-679.827] * (-694.153) [-686.085] (-727.878) (-730.641) -- 0:04:27
Average standard deviation of split frequencies: 0.010369
486000 -- (-682.563) (-732.997) (-719.074) [-676.942] * [-679.261] (-685.072) (-725.267) (-723.333) -- 0:04:26
487000 -- [-690.779] (-746.411) (-723.789) (-688.071) * (-678.243) [-682.752] (-721.600) (-722.255) -- 0:04:25
488000 -- (-686.888) (-740.491) (-723.126) [-678.339] * [-682.314] (-683.577) (-728.338) (-725.356) -- 0:04:25
489000 -- (-686.629) (-733.741) (-713.232) [-679.513] * (-681.072) [-680.684] (-717.942) (-713.160) -- 0:04:24
490000 -- (-689.946) (-750.447) (-720.411) [-684.445] * (-682.186) [-683.751] (-721.245) (-719.782) -- 0:04:24
Average standard deviation of split frequencies: 0.010465
491000 -- (-687.784) (-736.312) (-724.483) [-681.295] * [-682.570] (-692.855) (-717.153) (-721.668) -- 0:04:23
492000 -- [-684.647] (-732.210) (-730.443) (-675.491) * (-677.878) [-678.140] (-720.816) (-719.250) -- 0:04:23
493000 -- [-695.541] (-730.950) (-717.494) (-687.063) * [-677.259] (-680.877) (-725.000) (-719.972) -- 0:04:22
494000 -- (-685.140) (-726.965) (-709.273) [-685.191] * [-686.204] (-684.489) (-718.699) (-719.722) -- 0:04:22
495000 -- [-673.522] (-737.373) (-725.092) (-680.955) * [-683.812] (-686.430) (-720.261) (-722.029) -- 0:04:21
Average standard deviation of split frequencies: 0.011099
496000 -- (-684.890) (-735.828) (-717.833) [-675.449] * (-689.829) [-685.753] (-713.351) (-717.681) -- 0:04:21
497000 -- [-683.795] (-742.803) (-713.679) (-680.045) * (-686.084) [-679.857] (-723.460) (-717.166) -- 0:04:20
498000 -- [-677.627] (-750.932) (-712.573) (-683.229) * (-689.029) [-681.628] (-723.592) (-723.311) -- 0:04:20
499000 -- [-685.940] (-737.710) (-713.989) (-691.402) * [-684.408] (-689.058) (-734.151) (-720.873) -- 0:04:19
500000 -- (-684.480) (-733.734) (-725.814) [-692.147] * (-685.374) [-680.968] (-716.133) (-715.120) -- 0:04:19
Average standard deviation of split frequencies: 0.011265
501000 -- [-674.069] (-732.420) (-720.076) (-691.835) * (-679.930) [-677.473] (-719.789) (-718.420) -- 0:04:17
502000 -- [-679.184] (-738.898) (-720.252) (-688.980) * [-683.725] (-683.246) (-725.551) (-729.487) -- 0:04:16
503000 -- [-689.480] (-739.542) (-711.060) (-690.009) * [-678.199] (-693.902) (-728.723) (-726.466) -- 0:04:16
504000 -- (-681.776) (-742.185) (-713.399) [-680.907] * (-673.771) [-680.050] (-737.700) (-727.207) -- 0:04:15
505000 -- (-690.275) (-735.242) (-716.842) [-686.932] * [-677.231] (-693.419) (-724.396) (-729.106) -- 0:04:15
Average standard deviation of split frequencies: 0.011778
506000 -- [-683.332] (-734.542) (-717.798) (-686.496) * [-681.867] (-687.542) (-728.075) (-736.273) -- 0:04:14
507000 -- [-679.240] (-738.137) (-725.361) (-689.610) * [-681.668] (-684.519) (-719.029) (-725.928) -- 0:04:14
508000 -- [-678.509] (-743.003) (-723.256) (-679.610) * [-680.435] (-693.706) (-719.187) (-721.542) -- 0:04:14
509000 -- [-681.083] (-727.127) (-714.431) (-683.429) * (-684.128) [-683.412] (-720.995) (-726.122) -- 0:04:13
510000 -- (-692.439) (-735.105) (-723.149) [-680.607] * [-679.751] (-685.464) (-718.696) (-726.958) -- 0:04:13
Average standard deviation of split frequencies: 0.011011
511000 -- (-688.581) (-737.224) (-703.620) [-678.632] * (-681.599) [-689.549] (-730.809) (-717.174) -- 0:04:13
512000 -- (-686.103) (-741.787) (-722.484) [-675.009] * (-691.658) [-671.268] (-719.585) (-720.265) -- 0:04:13
513000 -- (-681.823) (-736.454) (-718.715) [-678.433] * (-679.270) [-678.727] (-721.007) (-709.622) -- 0:04:12
514000 -- (-683.218) (-732.909) (-713.791) [-676.478] * [-678.279] (-688.048) (-724.653) (-718.422) -- 0:04:12
515000 -- (-686.128) (-732.312) (-714.452) [-679.623] * (-673.953) [-678.235] (-730.477) (-715.345) -- 0:04:12
Average standard deviation of split frequencies: 0.010082
516000 -- [-675.601] (-724.140) (-732.704) (-689.375) * (-677.017) [-683.738] (-723.510) (-730.090) -- 0:04:11
517000 -- [-684.380] (-728.132) (-718.298) (-680.900) * [-687.398] (-689.220) (-719.776) (-723.664) -- 0:04:11
518000 -- (-683.278) (-727.207) (-721.543) [-680.142] * [-687.341] (-684.131) (-729.561) (-720.894) -- 0:04:11
519000 -- (-686.304) (-723.202) (-711.922) [-682.907] * (-691.897) [-685.229] (-725.090) (-729.030) -- 0:04:11
520000 -- (-679.116) (-733.783) (-722.015) [-677.567] * (-683.533) [-675.499] (-730.293) (-729.282) -- 0:04:10
Average standard deviation of split frequencies: 0.009830
521000 -- [-684.561] (-740.904) (-716.141) (-672.503) * [-673.974] (-680.831) (-720.125) (-725.527) -- 0:04:10
522000 -- [-681.469] (-734.323) (-715.281) (-685.303) * [-677.545] (-689.079) (-719.162) (-716.614) -- 0:04:09
523000 -- (-680.003) (-731.822) (-720.196) [-675.076] * (-692.000) [-681.636] (-715.319) (-724.759) -- 0:04:09
524000 -- [-677.662] (-739.184) (-722.340) (-684.528) * (-689.566) [-684.202] (-721.271) (-729.285) -- 0:04:08
525000 -- (-683.121) (-742.685) (-720.411) [-684.341] * (-691.305) [-684.874] (-733.397) (-717.976) -- 0:04:08
Average standard deviation of split frequencies: 0.009858
526000 -- [-692.399] (-736.268) (-719.319) (-677.145) * (-687.258) [-679.450] (-728.716) (-715.760) -- 0:04:08
527000 -- [-683.577] (-723.708) (-715.724) (-680.657) * [-689.948] (-679.990) (-721.628) (-725.862) -- 0:04:07
528000 -- (-689.061) (-732.146) (-713.262) [-689.208] * [-675.106] (-681.918) (-726.130) (-729.804) -- 0:04:07
529000 -- [-675.779] (-734.668) (-719.952) (-684.046) * (-682.130) [-677.108] (-723.018) (-725.622) -- 0:04:07
530000 -- (-680.481) (-735.892) (-721.362) [-677.136] * (-675.567) [-683.853] (-723.095) (-723.744) -- 0:04:07
Average standard deviation of split frequencies: 0.009925
531000 -- (-686.160) (-734.766) (-714.738) [-678.480] * [-680.385] (-682.362) (-729.903) (-725.769) -- 0:04:06
532000 -- [-686.658] (-728.195) (-726.783) (-687.384) * (-681.056) [-681.647] (-730.602) (-726.921) -- 0:04:06
533000 -- (-677.615) (-733.328) (-720.442) [-677.017] * (-684.495) [-680.153] (-731.475) (-723.365) -- 0:04:06
534000 -- (-687.892) (-747.952) (-722.400) [-678.848] * (-688.769) [-673.040] (-726.702) (-714.481) -- 0:04:05
535000 -- [-685.612] (-728.467) (-724.179) (-678.888) * (-683.832) [-675.949] (-721.392) (-720.172) -- 0:04:05
Average standard deviation of split frequencies: 0.009856
536000 -- (-687.049) (-732.121) (-731.056) [-677.281] * [-677.209] (-675.818) (-725.397) (-720.283) -- 0:04:04
537000 -- (-682.903) (-730.702) (-720.282) [-678.653] * (-688.876) [-684.871] (-723.110) (-723.214) -- 0:04:04
538000 -- (-694.668) (-727.767) (-716.653) [-682.121] * (-691.494) [-681.514] (-718.151) (-717.194) -- 0:04:03
539000 -- (-687.168) (-732.722) (-710.488) [-681.489] * [-680.917] (-687.668) (-731.078) (-724.658) -- 0:04:02
540000 -- [-685.958] (-736.537) (-731.311) (-681.698) * [-681.601] (-684.597) (-730.255) (-718.643) -- 0:04:01
Average standard deviation of split frequencies: 0.009891
541000 -- (-689.370) (-733.667) (-713.403) [-681.450] * (-683.208) [-679.197] (-714.131) (-717.688) -- 0:04:01
542000 -- [-679.420] (-728.805) (-727.649) (-681.682) * [-684.833] (-685.495) (-725.811) (-720.474) -- 0:04:01
543000 -- (-685.929) (-728.387) (-716.719) [-686.388] * (-683.152) [-680.348] (-726.543) (-729.428) -- 0:04:00
544000 -- (-691.665) (-731.649) (-721.422) [-685.373] * [-683.263] (-683.272) (-716.470) (-727.166) -- 0:04:00
545000 -- (-680.874) (-729.914) (-714.964) [-682.164] * (-688.946) [-683.610] (-722.037) (-715.128) -- 0:04:00
Average standard deviation of split frequencies: 0.009843
546000 -- (-683.450) (-740.254) (-719.265) [-688.192] * (-676.329) [-682.159] (-717.945) (-720.703) -- 0:04:00
547000 -- (-687.981) (-741.703) (-725.846) [-681.866] * [-675.038] (-685.918) (-728.352) (-729.085) -- 0:03:59
548000 -- (-680.283) (-734.943) (-721.563) [-687.766] * [-687.598] (-687.135) (-716.228) (-716.488) -- 0:03:59
549000 -- (-682.521) (-733.941) (-721.012) [-679.741] * (-684.373) [-679.822] (-729.341) (-723.506) -- 0:03:59
550000 -- (-694.830) (-727.959) (-721.326) [-688.866] * [-689.546] (-678.748) (-733.212) (-722.531) -- 0:03:58
Average standard deviation of split frequencies: 0.009948
551000 -- [-690.890] (-731.310) (-714.722) (-684.834) * (-686.540) [-678.343] (-727.630) (-728.802) -- 0:03:57
552000 -- (-684.580) (-736.669) (-710.735) [-681.434] * (-680.154) [-674.336] (-732.281) (-724.166) -- 0:03:57
553000 -- [-683.941] (-732.963) (-716.338) (-681.719) * (-683.353) [-683.057] (-727.869) (-727.060) -- 0:03:57
554000 -- (-692.366) (-727.544) (-717.013) [-678.367] * [-681.302] (-680.637) (-729.922) (-716.282) -- 0:03:56
555000 -- [-680.914] (-733.286) (-723.787) (-682.089) * [-680.712] (-685.267) (-732.662) (-729.335) -- 0:03:56
Average standard deviation of split frequencies: 0.009970
556000 -- (-681.749) (-735.137) (-717.365) [-679.422] * (-690.805) [-686.503] (-721.878) (-719.150) -- 0:03:56
557000 -- (-689.979) (-734.089) (-719.317) [-691.025] * (-685.107) [-678.094] (-717.559) (-715.805) -- 0:03:56
558000 -- (-685.727) (-739.499) (-719.028) [-681.146] * [-684.465] (-679.766) (-717.019) (-725.937) -- 0:03:55
559000 -- [-678.682] (-732.900) (-717.915) (-688.356) * (-686.500) [-684.043] (-716.047) (-729.999) -- 0:03:55
560000 -- [-678.951] (-730.646) (-713.069) (-683.792) * (-680.511) [-681.953] (-722.422) (-719.875) -- 0:03:54
Average standard deviation of split frequencies: 0.010180
561000 -- (-685.470) (-737.633) (-709.517) [-683.995] * [-683.573] (-680.342) (-720.785) (-715.951) -- 0:03:53
562000 -- (-685.494) (-737.654) (-719.162) [-681.831] * [-681.219] (-679.431) (-719.689) (-719.244) -- 0:03:53
563000 -- (-683.308) (-737.655) (-721.188) [-676.819] * [-676.438] (-685.549) (-718.730) (-723.166) -- 0:03:53
564000 -- (-689.126) (-749.892) (-714.166) [-683.454] * (-687.716) [-686.988] (-725.264) (-709.698) -- 0:03:52
565000 -- (-684.774) (-738.730) (-714.650) [-681.918] * [-676.032] (-691.393) (-717.163) (-728.959) -- 0:03:52
Average standard deviation of split frequencies: 0.010232
566000 -- (-685.779) (-736.769) (-710.953) [-680.782] * [-678.710] (-689.149) (-718.108) (-730.276) -- 0:03:51
567000 -- (-681.130) (-734.459) (-717.619) [-677.921] * (-689.508) [-685.899] (-720.974) (-728.489) -- 0:03:51
568000 -- [-680.680] (-745.110) (-716.833) (-690.130) * [-677.902] (-672.127) (-722.635) (-719.760) -- 0:03:50
569000 -- [-683.188] (-746.215) (-719.109) (-693.590) * (-685.839) [-677.897] (-718.020) (-726.203) -- 0:03:50
570000 -- [-684.204] (-728.981) (-716.493) (-696.878) * (-679.708) [-679.324] (-720.116) (-728.525) -- 0:03:49
Average standard deviation of split frequencies: 0.010208
571000 -- [-678.573] (-742.922) (-729.286) (-693.627) * (-692.542) [-677.522] (-723.871) (-717.897) -- 0:03:49
572000 -- [-684.870] (-736.627) (-732.906) (-691.743) * [-689.680] (-679.120) (-724.416) (-718.077) -- 0:03:48
573000 -- (-700.328) (-739.404) (-723.541) [-678.446] * (-675.757) [-682.685] (-725.503) (-720.428) -- 0:03:47
574000 -- (-677.988) (-728.323) (-728.630) [-688.216] * (-684.913) [-688.215] (-724.428) (-716.173) -- 0:03:47
575000 -- (-685.996) (-736.325) (-715.320) [-680.528] * [-686.455] (-687.731) (-728.614) (-721.697) -- 0:03:46
Average standard deviation of split frequencies: 0.010301
576000 -- [-682.504] (-745.821) (-710.262) (-685.493) * [-685.306] (-689.903) (-731.206) (-719.074) -- 0:03:45
577000 -- (-677.004) (-750.916) (-719.505) [-679.760] * [-682.957] (-697.553) (-726.462) (-720.506) -- 0:03:45
578000 -- (-692.729) (-730.051) (-719.071) [-671.923] * [-673.265] (-692.629) (-727.411) (-715.990) -- 0:03:44
579000 -- [-673.103] (-732.176) (-721.949) (-682.372) * (-687.009) [-687.364] (-722.030) (-723.153) -- 0:03:44
580000 -- (-683.745) (-740.917) (-714.381) [-672.754] * [-681.404] (-686.994) (-727.632) (-716.115) -- 0:03:44
Average standard deviation of split frequencies: 0.010050
581000 -- (-675.322) (-741.002) (-717.091) [-686.846] * [-688.482] (-691.932) (-727.553) (-718.330) -- 0:03:43
582000 -- [-682.605] (-739.327) (-719.283) (-680.858) * [-682.391] (-700.269) (-722.580) (-725.762) -- 0:03:43
583000 -- (-680.407) (-740.035) (-716.193) [-695.382] * [-680.843] (-700.577) (-714.909) (-722.873) -- 0:03:43
584000 -- (-684.432) (-733.727) (-716.722) [-687.698] * [-689.553] (-684.648) (-716.803) (-722.586) -- 0:03:42
585000 -- (-686.332) (-737.308) (-722.557) [-683.096] * (-691.027) [-681.355] (-721.881) (-732.320) -- 0:03:42
Average standard deviation of split frequencies: 0.010056
586000 -- (-678.394) (-743.794) (-729.958) [-680.588] * (-687.722) [-681.493] (-721.954) (-721.023) -- 0:03:41
587000 -- (-683.985) (-734.495) (-711.766) [-674.308] * (-684.153) [-677.895] (-723.827) (-717.177) -- 0:03:41
588000 -- (-687.309) (-739.826) (-727.874) [-678.611] * (-683.825) [-680.633] (-716.020) (-736.603) -- 0:03:40
589000 -- [-687.985] (-739.485) (-717.623) (-681.539) * [-675.129] (-686.633) (-720.564) (-721.608) -- 0:03:40
590000 -- [-683.668] (-742.771) (-714.984) (-683.490) * [-688.935] (-681.535) (-716.745) (-731.549) -- 0:03:40
Average standard deviation of split frequencies: 0.009805
591000 -- (-683.675) (-736.368) (-716.611) [-687.131] * [-683.204] (-683.100) (-722.587) (-737.159) -- 0:03:39
592000 -- (-679.359) (-725.513) (-717.881) [-682.240] * (-685.395) [-687.150] (-723.906) (-726.219) -- 0:03:39
593000 -- (-683.952) (-733.088) (-706.317) [-673.865] * [-684.099] (-688.445) (-722.945) (-734.804) -- 0:03:38
594000 -- [-676.317] (-733.176) (-716.057) (-688.381) * [-678.446] (-683.505) (-717.006) (-728.684) -- 0:03:38
595000 -- (-687.323) (-731.029) (-717.116) [-676.838] * [-684.606] (-683.778) (-720.301) (-727.124) -- 0:03:37
Average standard deviation of split frequencies: 0.009972
596000 -- (-683.128) (-723.076) (-713.584) [-682.822] * [-677.528] (-688.822) (-719.837) (-736.225) -- 0:03:37
597000 -- (-681.475) (-728.342) (-724.365) [-686.652] * [-680.046] (-683.853) (-719.644) (-720.928) -- 0:03:37
598000 -- [-679.041] (-737.032) (-711.483) (-686.342) * [-676.824] (-684.356) (-714.990) (-711.009) -- 0:03:36
599000 -- [-679.741] (-726.845) (-712.038) (-688.462) * [-677.716] (-678.042) (-721.303) (-722.524) -- 0:03:36
600000 -- [-674.454] (-738.078) (-715.368) (-683.751) * [-674.612] (-687.538) (-720.245) (-726.618) -- 0:03:36
Average standard deviation of split frequencies: 0.010034
601000 -- (-680.728) (-741.280) (-715.541) [-677.968] * (-691.920) [-676.674] (-724.246) (-723.134) -- 0:03:35
602000 -- [-682.693] (-734.020) (-721.500) (-681.759) * (-694.237) [-687.017] (-718.654) (-720.411) -- 0:03:34
603000 -- [-690.248] (-728.815) (-726.835) (-679.764) * [-690.899] (-679.928) (-715.506) (-727.171) -- 0:03:34
604000 -- (-697.436) (-726.617) (-731.187) [-683.926] * [-684.354] (-681.334) (-722.593) (-725.600) -- 0:03:34
605000 -- [-683.692] (-720.954) (-717.941) (-681.747) * [-680.976] (-681.477) (-721.700) (-724.765) -- 0:03:33
Average standard deviation of split frequencies: 0.010529
606000 -- [-674.840] (-726.804) (-722.995) (-685.407) * (-682.036) [-677.058] (-722.847) (-721.348) -- 0:03:33
607000 -- [-676.416] (-731.734) (-713.085) (-683.648) * (-678.657) [-677.927] (-729.912) (-714.716) -- 0:03:33
608000 -- (-685.615) (-732.750) (-723.924) [-685.617] * [-679.065] (-684.738) (-728.935) (-719.042) -- 0:03:32
609000 -- (-674.918) (-734.945) (-716.809) [-679.325] * (-676.427) [-678.333] (-732.734) (-716.409) -- 0:03:31
610000 -- (-692.045) (-731.217) (-713.909) [-681.800] * (-680.247) [-668.008] (-723.223) (-719.850) -- 0:03:31
Average standard deviation of split frequencies: 0.010532
611000 -- (-684.153) (-727.844) (-710.069) [-683.692] * [-679.261] (-679.711) (-730.800) (-732.286) -- 0:03:30
612000 -- [-681.541] (-739.904) (-721.907) (-688.070) * (-681.783) [-688.882] (-736.001) (-733.063) -- 0:03:30
613000 -- (-693.368) (-729.116) (-726.658) [-682.440] * [-679.024] (-688.108) (-737.516) (-732.024) -- 0:03:30
614000 -- [-683.334] (-735.942) (-710.403) (-695.434) * (-682.413) [-691.707] (-723.300) (-728.519) -- 0:03:29
615000 -- (-690.894) (-737.247) (-722.288) [-677.710] * (-686.069) [-681.364] (-721.974) (-723.646) -- 0:03:29
Average standard deviation of split frequencies: 0.010440
616000 -- [-672.829] (-728.476) (-709.607) (-677.274) * [-677.900] (-680.519) (-726.872) (-735.745) -- 0:03:28
617000 -- (-678.322) (-729.636) (-726.793) [-687.095] * [-692.662] (-677.798) (-725.769) (-718.713) -- 0:03:28
618000 -- [-681.616] (-729.108) (-715.152) (-680.045) * (-689.216) [-683.129] (-728.639) (-715.062) -- 0:03:27
619000 -- (-689.076) (-736.968) (-717.021) [-679.092] * [-676.413] (-681.774) (-730.101) (-724.631) -- 0:03:27
620000 -- (-681.317) (-733.835) (-725.438) [-680.547] * [-680.268] (-677.902) (-717.891) (-727.082) -- 0:03:27
Average standard deviation of split frequencies: 0.010362
621000 -- [-683.163] (-745.332) (-714.901) (-685.594) * [-676.731] (-694.936) (-722.604) (-723.062) -- 0:03:26
622000 -- [-678.441] (-738.849) (-717.639) (-699.819) * [-678.908] (-689.212) (-722.028) (-734.749) -- 0:03:26
623000 -- [-675.267] (-732.197) (-721.192) (-691.615) * (-683.434) [-682.183] (-728.894) (-727.696) -- 0:03:25
624000 -- [-688.691] (-735.257) (-721.396) (-674.783) * (-689.960) [-675.680] (-729.860) (-727.870) -- 0:03:25
625000 -- [-672.905] (-736.929) (-708.624) (-674.933) * [-680.570] (-683.776) (-717.028) (-716.956) -- 0:03:24
Average standard deviation of split frequencies: 0.010127
626000 -- (-697.200) (-741.305) (-720.218) [-677.473] * (-684.589) [-680.710] (-714.593) (-724.365) -- 0:03:24
627000 -- (-679.102) (-734.230) (-717.459) [-689.485] * [-687.773] (-686.771) (-724.979) (-725.002) -- 0:03:24
628000 -- [-680.058] (-739.606) (-713.505) (-681.243) * (-682.532) [-684.626] (-726.127) (-722.831) -- 0:03:23
629000 -- [-683.376] (-734.055) (-723.402) (-680.306) * [-686.392] (-683.120) (-731.860) (-716.376) -- 0:03:22
630000 -- (-683.299) (-742.477) (-707.619) [-684.724] * (-685.838) [-681.804] (-725.057) (-728.413) -- 0:03:22
Average standard deviation of split frequencies: 0.010064
631000 -- [-690.461] (-732.210) (-714.515) (-696.361) * [-677.762] (-677.440) (-720.737) (-723.474) -- 0:03:22
632000 -- [-675.549] (-733.820) (-711.714) (-679.281) * (-683.670) [-680.371] (-718.105) (-718.641) -- 0:03:21
633000 -- (-680.796) (-734.711) (-722.473) [-671.609] * [-678.291] (-678.297) (-723.474) (-731.639) -- 0:03:21
634000 -- (-681.204) (-728.671) (-717.818) [-686.287] * [-683.258] (-685.865) (-715.561) (-722.705) -- 0:03:20
635000 -- [-676.006] (-729.102) (-728.664) (-681.354) * [-680.776] (-686.279) (-728.848) (-724.736) -- 0:03:20
Average standard deviation of split frequencies: 0.010403
636000 -- [-686.944] (-731.233) (-719.915) (-685.637) * (-681.983) [-691.142] (-729.369) (-726.257) -- 0:03:19
637000 -- [-673.425] (-734.870) (-714.994) (-681.181) * (-678.291) [-686.334] (-726.317) (-722.601) -- 0:03:18
638000 -- (-679.304) (-736.551) (-720.916) [-687.275] * (-678.323) [-685.419] (-713.965) (-718.165) -- 0:03:18
639000 -- (-686.426) (-730.026) (-728.657) [-677.728] * (-680.437) [-676.623] (-725.829) (-725.401) -- 0:03:17
640000 -- [-679.762] (-745.237) (-714.114) (-692.214) * (-678.092) [-681.390] (-737.099) (-718.111) -- 0:03:16
Average standard deviation of split frequencies: 0.009644
641000 -- [-685.168] (-742.141) (-724.250) (-677.774) * (-676.598) [-680.204] (-724.584) (-724.454) -- 0:03:16
642000 -- [-682.799] (-742.225) (-717.824) (-688.127) * [-677.023] (-681.716) (-721.037) (-724.362) -- 0:03:15
643000 -- (-692.714) (-726.812) (-718.557) [-679.880] * (-674.494) [-676.006] (-733.501) (-731.298) -- 0:03:14
644000 -- (-698.345) (-733.633) (-714.353) [-680.288] * (-685.025) [-679.330] (-733.500) (-725.805) -- 0:03:14
645000 -- [-682.638] (-727.247) (-708.320) (-689.310) * [-681.537] (-682.950) (-732.957) (-734.194) -- 0:03:13
Average standard deviation of split frequencies: 0.009643
646000 -- (-688.789) (-733.202) (-726.091) [-681.815] * (-687.034) [-683.167] (-732.271) (-735.386) -- 0:03:13
647000 -- [-677.877] (-733.180) (-722.799) (-685.059) * [-688.220] (-691.872) (-719.564) (-720.281) -- 0:03:12
648000 -- [-671.715] (-737.812) (-721.602) (-683.444) * (-685.171) [-685.270] (-718.147) (-719.304) -- 0:03:12
649000 -- (-689.388) (-738.765) (-715.896) [-693.563] * [-675.423] (-690.400) (-724.048) (-721.975) -- 0:03:11
650000 -- (-691.573) (-737.625) (-711.502) [-675.905] * (-686.894) [-674.968] (-716.568) (-724.575) -- 0:03:11
Average standard deviation of split frequencies: 0.009781
651000 -- (-683.541) (-729.656) (-725.217) [-681.019] * (-683.334) [-681.167] (-722.329) (-723.025) -- 0:03:10
652000 -- (-699.998) (-732.424) (-734.608) [-687.228] * [-680.767] (-682.793) (-717.153) (-722.641) -- 0:03:10
653000 -- (-687.291) (-751.423) (-724.277) [-680.091] * (-699.102) [-688.562] (-726.102) (-717.416) -- 0:03:09
654000 -- (-685.781) (-747.010) (-713.594) [-677.619] * [-677.391] (-680.859) (-724.629) (-724.411) -- 0:03:08
655000 -- (-691.492) (-736.686) (-724.106) [-682.299] * (-671.480) [-672.781] (-714.448) (-732.648) -- 0:03:08
Average standard deviation of split frequencies: 0.009778
656000 -- (-690.997) (-739.085) (-717.786) [-679.411] * [-686.711] (-680.576) (-714.129) (-729.126) -- 0:03:07
657000 -- [-687.314] (-750.086) (-724.442) (-688.288) * (-688.756) [-679.753] (-717.072) (-718.167) -- 0:03:06
658000 -- [-680.478] (-749.110) (-722.574) (-688.932) * [-678.405] (-682.811) (-712.665) (-730.729) -- 0:03:06
659000 -- [-678.746] (-733.923) (-730.915) (-683.019) * [-692.171] (-697.196) (-721.284) (-724.468) -- 0:03:05
660000 -- [-687.216] (-736.596) (-719.021) (-683.391) * [-683.830] (-686.693) (-717.289) (-715.705) -- 0:03:04
Average standard deviation of split frequencies: 0.009174
661000 -- (-683.430) (-730.738) (-718.538) [-676.583] * [-682.215] (-691.424) (-729.659) (-727.410) -- 0:03:04
662000 -- [-681.020] (-730.994) (-716.095) (-686.036) * (-683.142) [-681.026] (-717.755) (-712.709) -- 0:03:03
663000 -- [-679.865] (-736.140) (-714.277) (-686.446) * (-680.850) [-683.565] (-727.106) (-714.830) -- 0:03:03
664000 -- (-683.026) (-736.213) (-713.610) [-685.216] * (-690.299) [-692.956] (-720.497) (-733.406) -- 0:03:02
665000 -- [-684.165] (-731.899) (-723.512) (-691.189) * (-684.172) [-692.705] (-724.106) (-732.670) -- 0:03:02
Average standard deviation of split frequencies: 0.009128
666000 -- [-676.928] (-734.245) (-720.360) (-689.892) * [-676.614] (-681.769) (-715.291) (-723.109) -- 0:03:01
667000 -- (-683.190) (-731.351) (-717.535) [-682.310] * [-675.826] (-686.898) (-718.307) (-714.009) -- 0:03:01
668000 -- (-684.015) (-745.390) (-712.600) [-687.666] * [-682.527] (-687.230) (-725.295) (-724.884) -- 0:03:00
669000 -- [-676.590] (-733.329) (-717.803) (-696.691) * (-684.329) [-697.087] (-724.791) (-717.770) -- 0:03:00
670000 -- [-680.833] (-733.632) (-714.766) (-683.487) * [-678.892] (-688.402) (-719.625) (-715.329) -- 0:02:59
Average standard deviation of split frequencies: 0.009186
671000 -- (-683.100) (-734.648) (-714.615) [-680.729] * [-676.114] (-679.832) (-741.977) (-711.293) -- 0:02:58
672000 -- [-674.104] (-737.714) (-724.334) (-684.200) * [-677.341] (-676.310) (-722.391) (-727.507) -- 0:02:58
673000 -- (-678.645) (-740.754) (-715.659) [-680.951] * (-682.670) [-678.557] (-717.109) (-727.364) -- 0:02:57
674000 -- [-685.666] (-736.021) (-716.268) (-679.136) * [-670.572] (-682.294) (-720.228) (-727.467) -- 0:02:57
675000 -- (-684.306) (-726.383) (-715.448) [-688.830] * [-683.446] (-676.667) (-724.761) (-719.658) -- 0:02:56
Average standard deviation of split frequencies: 0.009613
676000 -- [-681.570] (-729.615) (-714.878) (-681.952) * (-688.039) [-673.980] (-723.308) (-712.918) -- 0:02:55
677000 -- (-684.256) (-739.676) (-720.452) [-675.678] * (-688.887) [-683.338] (-725.830) (-727.586) -- 0:02:55
678000 -- (-683.032) (-740.396) (-719.073) [-677.175] * (-684.074) [-677.352] (-717.318) (-717.027) -- 0:02:54
679000 -- [-684.540] (-745.795) (-719.986) (-681.458) * (-681.254) [-675.879] (-729.187) (-716.410) -- 0:02:53
680000 -- (-686.608) (-738.502) (-724.305) [-682.630] * (-686.722) [-678.807] (-726.774) (-722.165) -- 0:02:53
Average standard deviation of split frequencies: 0.009696
681000 -- (-671.608) (-733.478) (-718.029) [-681.371] * [-680.601] (-680.818) (-718.846) (-714.360) -- 0:02:52
682000 -- [-683.950] (-731.568) (-726.018) (-680.828) * [-689.948] (-682.713) (-718.868) (-727.537) -- 0:02:52
683000 -- [-681.323] (-732.133) (-723.030) (-682.479) * [-684.930] (-687.501) (-727.108) (-714.129) -- 0:02:51
684000 -- [-674.982] (-736.130) (-720.962) (-681.872) * (-678.662) [-682.441] (-718.471) (-713.472) -- 0:02:50
685000 -- [-677.433] (-742.822) (-722.371) (-687.018) * (-684.719) [-681.104] (-718.950) (-716.463) -- 0:02:50
Average standard deviation of split frequencies: 0.009792
686000 -- [-684.492] (-746.078) (-720.642) (-683.219) * (-679.842) [-687.885] (-721.016) (-720.120) -- 0:02:49
687000 -- (-694.743) (-728.844) (-709.207) [-677.365] * [-692.132] (-682.608) (-726.097) (-716.401) -- 0:02:49
688000 -- (-691.557) (-736.191) (-707.442) [-675.401] * [-684.049] (-674.568) (-719.828) (-724.203) -- 0:02:48
689000 -- (-690.107) (-741.074) (-714.168) [-686.975] * (-685.738) [-676.439] (-719.551) (-726.403) -- 0:02:48
690000 -- [-686.651] (-739.627) (-718.757) (-682.340) * (-684.099) [-685.816] (-718.497) (-721.617) -- 0:02:47
Average standard deviation of split frequencies: 0.009287
691000 -- (-683.170) (-734.231) (-712.402) [-678.460] * [-680.490] (-688.464) (-724.684) (-722.902) -- 0:02:47
692000 -- [-678.116] (-739.263) (-723.200) (-688.218) * (-684.714) [-684.193] (-730.620) (-722.597) -- 0:02:46
693000 -- [-680.855] (-732.827) (-720.181) (-684.124) * (-690.139) [-689.548] (-723.848) (-723.584) -- 0:02:45
694000 -- [-685.442] (-730.592) (-715.138) (-686.206) * [-687.856] (-689.840) (-731.899) (-729.024) -- 0:02:45
695000 -- [-680.189] (-729.630) (-719.091) (-677.148) * [-681.814] (-692.900) (-739.589) (-724.457) -- 0:02:44
Average standard deviation of split frequencies: 0.009313
696000 -- (-687.373) (-726.658) (-719.798) [-680.177] * (-677.519) [-683.772] (-728.701) (-716.065) -- 0:02:44
697000 -- (-684.826) (-727.974) (-713.771) [-672.755] * (-688.097) [-679.115] (-719.063) (-721.527) -- 0:02:43
698000 -- [-675.578] (-737.199) (-727.636) (-686.469) * [-681.435] (-686.624) (-733.627) (-715.954) -- 0:02:43
699000 -- (-679.650) (-731.677) (-724.711) [-684.804] * [-680.544] (-686.118) (-730.471) (-717.370) -- 0:02:42
700000 -- (-682.277) (-732.065) (-738.098) [-679.073] * [-680.343] (-686.884) (-724.573) (-720.068) -- 0:02:42
Average standard deviation of split frequencies: 0.009155
701000 -- (-682.674) (-725.169) (-726.567) [-682.573] * (-680.448) [-689.060] (-723.799) (-725.062) -- 0:02:41
702000 -- [-684.428] (-743.024) (-730.999) (-684.546) * [-682.249] (-687.006) (-718.123) (-717.122) -- 0:02:40
703000 -- (-692.440) (-738.761) (-716.505) [-683.631] * [-681.648] (-684.719) (-715.941) (-723.537) -- 0:02:40
704000 -- [-688.893] (-739.347) (-725.203) (-684.497) * [-684.464] (-694.070) (-719.425) (-723.232) -- 0:02:39
705000 -- [-685.580] (-733.721) (-725.588) (-677.244) * [-683.394] (-674.311) (-719.852) (-732.959) -- 0:02:39
Average standard deviation of split frequencies: 0.009133
706000 -- [-673.916] (-741.889) (-721.516) (-688.549) * (-684.910) [-679.583] (-727.454) (-721.967) -- 0:02:38
707000 -- (-688.274) (-737.820) (-721.060) [-677.948] * [-681.258] (-679.370) (-737.466) (-720.104) -- 0:02:38
708000 -- (-680.717) (-730.813) (-720.764) [-682.946] * [-678.257] (-678.560) (-724.066) (-729.456) -- 0:02:37
709000 -- [-687.555] (-730.790) (-716.650) (-686.308) * (-685.743) [-676.157] (-725.404) (-715.247) -- 0:02:37
710000 -- (-681.642) (-737.278) (-713.128) [-673.353] * (-692.065) [-676.797] (-719.310) (-722.103) -- 0:02:36
Average standard deviation of split frequencies: 0.009310
711000 -- (-684.083) (-741.948) (-717.373) [-679.785] * (-689.710) [-679.218] (-718.656) (-716.356) -- 0:02:36
712000 -- (-684.184) (-729.849) (-710.954) [-673.114] * (-684.378) [-683.124] (-725.546) (-719.331) -- 0:02:36
713000 -- [-689.091] (-735.605) (-713.760) (-681.346) * (-680.951) [-677.966] (-720.759) (-732.608) -- 0:02:35
714000 -- (-683.288) (-735.799) (-711.849) [-675.888] * (-684.337) [-681.923] (-722.354) (-730.494) -- 0:02:35
715000 -- [-681.758] (-731.994) (-715.061) (-675.018) * (-677.349) [-687.872] (-734.430) (-719.160) -- 0:02:34
Average standard deviation of split frequencies: 0.008888
716000 -- (-683.590) (-751.940) (-717.100) [-679.300] * [-677.145] (-688.979) (-723.842) (-723.505) -- 0:02:33
717000 -- [-690.581] (-745.180) (-708.439) (-686.339) * (-690.941) [-673.462] (-725.614) (-723.539) -- 0:02:33
718000 -- [-682.587] (-756.053) (-734.097) (-682.052) * (-679.432) [-681.598] (-742.119) (-721.120) -- 0:02:32
719000 -- (-694.519) (-734.936) (-719.257) [-677.960] * [-683.898] (-674.548) (-721.475) (-730.284) -- 0:02:32
720000 -- (-694.994) (-733.407) (-722.206) [-677.659] * [-679.450] (-683.656) (-729.732) (-726.200) -- 0:02:31
Average standard deviation of split frequencies: 0.009415
721000 -- [-680.601] (-737.849) (-713.366) (-682.569) * [-685.208] (-696.463) (-718.557) (-724.083) -- 0:02:30
722000 -- (-674.834) (-729.659) (-717.669) [-683.262] * (-682.534) [-680.248] (-750.898) (-720.661) -- 0:02:30
723000 -- (-685.441) (-739.058) (-716.932) [-682.306] * (-684.045) [-679.575] (-731.573) (-720.626) -- 0:02:29
724000 -- (-683.045) (-744.855) (-725.317) [-673.661] * (-686.026) [-677.649] (-722.667) (-726.219) -- 0:02:29
725000 -- (-683.411) (-725.094) (-725.369) [-682.683] * [-684.133] (-687.059) (-721.822) (-721.497) -- 0:02:28
Average standard deviation of split frequencies: 0.009180
726000 -- (-686.697) (-734.820) (-716.096) [-682.352] * (-685.704) [-688.173] (-727.785) (-724.925) -- 0:02:28
727000 -- [-684.882] (-743.426) (-712.846) (-683.487) * [-683.094] (-693.250) (-726.458) (-728.401) -- 0:02:27
728000 -- (-681.547) (-730.263) (-715.310) [-686.567] * [-679.590] (-687.830) (-729.934) (-717.643) -- 0:02:26
729000 -- [-687.475] (-728.987) (-714.423) (-679.478) * [-680.074] (-684.803) (-716.508) (-726.075) -- 0:02:26
730000 -- [-683.806] (-727.026) (-714.094) (-682.233) * [-676.599] (-686.163) (-715.674) (-728.161) -- 0:02:25
Average standard deviation of split frequencies: 0.009255
731000 -- [-684.121] (-739.991) (-718.525) (-692.217) * (-668.260) [-678.184] (-723.692) (-730.796) -- 0:02:25
732000 -- (-676.327) (-746.028) (-719.277) [-682.189] * [-673.269] (-683.822) (-719.303) (-719.663) -- 0:02:24
733000 -- (-677.951) (-733.876) (-722.845) [-680.402] * [-683.455] (-682.115) (-732.471) (-727.348) -- 0:02:24
734000 -- (-684.305) (-727.518) (-717.154) [-684.279] * [-684.611] (-683.781) (-729.639) (-723.400) -- 0:02:23
735000 -- (-683.143) (-731.226) (-721.860) [-685.968] * [-680.330] (-688.040) (-719.770) (-720.749) -- 0:02:23
Average standard deviation of split frequencies: 0.009630
736000 -- (-684.149) (-732.451) (-722.182) [-676.213] * (-681.400) [-684.894] (-739.196) (-724.163) -- 0:02:22
737000 -- [-677.214] (-734.871) (-725.305) (-681.014) * (-687.867) [-675.666] (-730.643) (-729.813) -- 0:02:21
738000 -- (-684.127) (-731.087) (-722.204) [-683.809] * (-682.571) [-680.401] (-726.231) (-727.520) -- 0:02:21
739000 -- [-683.364] (-739.279) (-715.279) (-682.932) * (-686.729) [-690.022] (-721.772) (-716.658) -- 0:02:20
740000 -- (-690.274) (-733.563) (-709.941) [-685.689] * [-689.845] (-687.740) (-716.166) (-729.456) -- 0:02:20
Average standard deviation of split frequencies: 0.009064
741000 -- (-689.676) (-733.331) (-725.818) [-678.077] * (-687.604) [-690.005] (-728.503) (-724.709) -- 0:02:19
742000 -- (-684.257) (-730.138) (-714.743) [-682.067] * (-686.530) [-687.920] (-720.412) (-716.103) -- 0:02:19
743000 -- [-679.132] (-734.568) (-721.893) (-681.588) * [-684.486] (-691.438) (-719.666) (-728.187) -- 0:02:18
744000 -- (-690.444) (-729.243) (-722.310) [-685.118] * [-681.906] (-691.979) (-727.714) (-717.933) -- 0:02:17
745000 -- [-683.098] (-729.670) (-708.756) (-681.044) * [-684.595] (-684.783) (-725.596) (-723.161) -- 0:02:17
Average standard deviation of split frequencies: 0.008934
746000 -- (-679.054) (-737.847) (-729.154) [-688.066] * (-675.436) [-684.307] (-712.375) (-723.785) -- 0:02:16
747000 -- (-689.526) (-738.981) (-711.195) [-687.280] * [-679.503] (-684.348) (-721.015) (-734.617) -- 0:02:16
748000 -- [-682.480] (-742.422) (-729.785) (-682.438) * (-694.163) [-679.542] (-729.536) (-717.503) -- 0:02:15
749000 -- (-682.300) (-756.047) (-721.582) [-686.953] * [-683.409] (-687.623) (-723.564) (-731.449) -- 0:02:15
750000 -- [-683.486] (-743.879) (-730.480) (-686.038) * [-674.946] (-683.686) (-728.606) (-718.110) -- 0:02:14
Average standard deviation of split frequencies: 0.009148
751000 -- [-682.561] (-738.351) (-719.562) (-678.200) * [-677.706] (-685.841) (-723.356) (-729.741) -- 0:02:14
752000 -- [-685.666] (-741.559) (-724.136) (-686.222) * [-675.034] (-680.521) (-724.445) (-726.143) -- 0:02:13
753000 -- (-682.437) (-734.615) (-717.534) [-675.830] * [-683.256] (-683.803) (-725.264) (-723.852) -- 0:02:13
754000 -- (-678.934) (-738.377) (-730.439) [-678.384] * [-676.285] (-684.308) (-717.458) (-731.107) -- 0:02:12
755000 -- [-678.921] (-735.315) (-717.492) (-676.858) * (-685.411) [-683.115] (-719.812) (-720.110) -- 0:02:12
Average standard deviation of split frequencies: 0.009062
756000 -- [-678.893] (-728.746) (-718.220) (-677.449) * [-684.923] (-688.653) (-716.875) (-723.094) -- 0:02:11
757000 -- [-679.545] (-734.884) (-712.482) (-685.472) * [-676.856] (-698.082) (-720.589) (-717.866) -- 0:02:10
758000 -- [-680.538] (-740.997) (-719.085) (-686.859) * [-684.592] (-689.856) (-714.015) (-725.289) -- 0:02:10
759000 -- (-682.647) (-739.575) (-725.922) [-680.903] * (-689.890) [-686.726] (-725.026) (-717.374) -- 0:02:09
760000 -- [-676.441] (-744.667) (-721.405) (-685.162) * (-681.724) [-683.596] (-719.843) (-714.630) -- 0:02:09
Average standard deviation of split frequencies: 0.008965
761000 -- (-682.406) (-749.856) (-718.871) [-691.167] * [-690.559] (-683.884) (-730.609) (-723.210) -- 0:02:08
762000 -- (-671.406) (-742.277) (-737.561) [-688.393] * (-681.577) [-680.442] (-722.200) (-726.568) -- 0:02:08
763000 -- (-683.581) (-731.739) (-718.560) [-690.376] * [-679.901] (-680.839) (-720.246) (-724.192) -- 0:02:07
764000 -- [-684.342] (-738.050) (-719.474) (-682.721) * [-673.933] (-679.942) (-716.837) (-717.230) -- 0:02:06
765000 -- (-685.715) (-727.720) (-725.992) [-680.536] * [-686.656] (-689.028) (-725.645) (-719.882) -- 0:02:06
Average standard deviation of split frequencies: 0.009149
766000 -- [-684.453] (-741.408) (-732.753) (-685.165) * [-683.777] (-689.417) (-718.748) (-726.679) -- 0:02:05
767000 -- (-676.248) (-732.572) (-718.204) [-678.936] * (-674.938) [-681.607] (-721.546) (-729.911) -- 0:02:05
768000 -- (-679.093) (-741.362) (-717.511) [-684.230] * (-681.486) [-679.737] (-733.249) (-720.770) -- 0:02:04
769000 -- (-679.891) (-745.106) (-724.729) [-689.077] * (-677.784) [-682.725] (-727.241) (-726.815) -- 0:02:04
770000 -- (-684.957) (-735.342) (-723.266) [-687.693] * (-677.875) [-675.703] (-721.391) (-716.199) -- 0:02:03
Average standard deviation of split frequencies: 0.008482
771000 -- [-679.157] (-734.813) (-716.591) (-680.744) * [-687.419] (-687.214) (-720.586) (-718.972) -- 0:02:02
772000 -- (-696.040) (-728.298) (-713.301) [-678.173] * [-677.717] (-680.704) (-731.812) (-722.130) -- 0:02:02
773000 -- (-683.380) (-732.067) (-722.137) [-676.183] * [-681.195] (-684.672) (-719.149) (-710.977) -- 0:02:01
774000 -- [-676.015] (-730.239) (-718.388) (-682.407) * [-682.271] (-678.990) (-722.313) (-721.779) -- 0:02:01
775000 -- (-680.655) (-737.240) (-713.395) [-683.058] * (-686.595) [-675.801] (-722.062) (-725.943) -- 0:02:00
Average standard deviation of split frequencies: 0.008282
776000 -- [-698.182] (-731.927) (-716.861) (-682.200) * [-689.093] (-681.639) (-726.232) (-715.699) -- 0:02:00
777000 -- [-686.583] (-734.868) (-715.187) (-683.269) * (-684.402) [-679.413] (-726.614) (-714.852) -- 0:01:59
778000 -- [-680.179] (-734.497) (-717.219) (-696.540) * [-683.022] (-680.088) (-729.462) (-721.961) -- 0:01:59
779000 -- (-679.794) (-733.834) (-713.244) [-675.764] * (-684.215) [-677.968] (-716.815) (-722.442) -- 0:01:58
780000 -- [-679.898] (-731.839) (-723.640) (-685.509) * (-684.722) [-679.012] (-726.796) (-719.316) -- 0:01:58
Average standard deviation of split frequencies: 0.008595
781000 -- (-668.569) (-743.626) (-716.173) [-679.690] * [-681.769] (-686.791) (-724.071) (-714.238) -- 0:01:57
782000 -- [-682.275] (-735.105) (-705.793) (-688.289) * [-688.717] (-680.108) (-722.848) (-726.719) -- 0:01:57
783000 -- [-679.083] (-735.437) (-717.225) (-682.485) * [-688.978] (-676.898) (-724.314) (-717.309) -- 0:01:56
784000 -- (-685.877) (-731.410) (-720.799) [-680.033] * (-683.802) [-677.471] (-723.423) (-720.693) -- 0:01:56
785000 -- (-677.726) (-731.219) (-732.111) [-683.245] * [-681.558] (-680.018) (-727.415) (-730.259) -- 0:01:55
Average standard deviation of split frequencies: 0.008748
786000 -- [-683.689] (-728.014) (-726.101) (-692.415) * [-685.712] (-679.818) (-723.191) (-725.010) -- 0:01:55
787000 -- (-687.980) (-734.144) (-725.418) [-692.198] * [-681.810] (-675.656) (-731.941) (-729.617) -- 0:01:54
788000 -- (-679.076) (-727.378) (-713.667) [-678.512] * [-681.093] (-680.187) (-717.214) (-726.535) -- 0:01:54
789000 -- (-680.771) (-741.973) (-713.555) [-680.311] * [-685.399] (-686.760) (-737.128) (-721.053) -- 0:01:53
790000 -- (-677.982) (-741.977) (-719.435) [-677.299] * [-675.424] (-674.574) (-719.195) (-737.628) -- 0:01:52
Average standard deviation of split frequencies: 0.008799
791000 -- (-676.081) (-733.485) (-720.263) [-683.452] * [-678.890] (-686.225) (-725.925) (-735.019) -- 0:01:52
792000 -- [-679.850] (-738.039) (-711.646) (-677.879) * (-685.684) [-681.661] (-726.965) (-715.491) -- 0:01:51
793000 -- (-682.830) (-727.884) (-717.267) [-671.021] * (-685.942) [-685.975] (-727.358) (-722.851) -- 0:01:51
794000 -- (-682.825) (-719.719) (-715.249) [-679.501] * (-683.275) [-681.111] (-722.692) (-725.727) -- 0:01:50
795000 -- (-690.963) (-740.296) (-715.590) [-676.220] * [-681.960] (-689.393) (-722.073) (-721.027) -- 0:01:50
Average standard deviation of split frequencies: 0.008699
796000 -- [-684.277] (-735.075) (-715.575) (-680.408) * [-672.568] (-689.109) (-717.067) (-729.943) -- 0:01:49
797000 -- (-689.112) (-732.758) (-723.547) [-683.406] * [-675.091] (-678.282) (-720.125) (-717.345) -- 0:01:49
798000 -- [-677.570] (-730.501) (-715.670) (-680.855) * (-686.981) [-685.399] (-725.706) (-732.350) -- 0:01:48
799000 -- (-687.260) (-729.932) (-703.684) [-694.815] * (-679.228) [-681.950] (-727.097) (-721.001) -- 0:01:47
800000 -- [-692.113] (-732.667) (-712.544) (-678.281) * (-684.905) [-676.987] (-714.943) (-727.021) -- 0:01:47
Average standard deviation of split frequencies: 0.008608
801000 -- (-689.206) (-725.947) (-716.152) [-673.563] * (-681.503) [-681.889] (-717.800) (-716.524) -- 0:01:46
802000 -- (-678.751) (-732.843) (-723.533) [-677.602] * [-684.986] (-689.079) (-721.017) (-720.795) -- 0:01:46
803000 -- (-682.037) (-731.418) (-711.014) [-679.608] * (-686.296) [-681.391] (-728.690) (-715.894) -- 0:01:45
804000 -- (-677.549) (-720.862) (-717.435) [-682.777] * (-680.311) [-680.438] (-720.778) (-726.708) -- 0:01:45
805000 -- (-680.153) (-739.132) (-710.908) [-686.622] * (-687.033) [-684.619] (-722.032) (-716.849) -- 0:01:44
Average standard deviation of split frequencies: 0.008612
806000 -- [-677.015] (-732.912) (-711.446) (-679.219) * (-677.891) [-682.612] (-721.578) (-730.213) -- 0:01:44
807000 -- [-674.813] (-741.254) (-718.472) (-692.409) * [-671.346] (-681.293) (-736.487) (-713.888) -- 0:01:43
808000 -- (-686.946) (-740.570) (-719.134) [-684.405] * (-687.646) [-676.842] (-716.891) (-717.254) -- 0:01:43
809000 -- (-686.902) (-727.511) (-717.586) [-679.053] * (-681.177) [-680.224] (-717.729) (-725.595) -- 0:01:42
810000 -- [-677.534] (-729.003) (-727.663) (-682.884) * [-683.941] (-686.282) (-726.082) (-737.465) -- 0:01:42
Average standard deviation of split frequencies: 0.008858
811000 -- (-686.219) (-724.405) (-721.937) [-680.462] * [-678.916] (-676.957) (-727.770) (-740.664) -- 0:01:41
812000 -- [-687.155] (-730.930) (-719.720) (-678.844) * [-678.960] (-685.110) (-725.386) (-726.353) -- 0:01:40
813000 -- (-681.156) (-733.878) (-717.867) [-685.070] * (-685.956) [-687.857] (-722.571) (-727.341) -- 0:01:40
814000 -- (-686.912) (-739.472) (-720.318) [-680.622] * (-683.170) [-691.381] (-715.490) (-727.112) -- 0:01:39
815000 -- (-675.052) (-731.494) (-721.793) [-683.355] * [-682.720] (-679.491) (-715.461) (-728.682) -- 0:01:39
Average standard deviation of split frequencies: 0.008944
816000 -- [-680.659] (-732.843) (-718.645) (-680.316) * (-689.869) [-682.007] (-728.193) (-714.769) -- 0:01:38
817000 -- (-695.852) (-739.888) (-716.992) [-683.827] * (-683.640) [-683.550] (-722.644) (-732.602) -- 0:01:38
818000 -- [-685.826] (-738.860) (-724.526) (-679.703) * (-684.492) [-680.874] (-717.646) (-717.904) -- 0:01:37
819000 -- (-684.976) (-737.862) (-720.891) [-676.882] * (-685.268) [-679.700] (-719.570) (-718.679) -- 0:01:37
820000 -- [-683.183] (-731.859) (-712.549) (-681.427) * (-676.391) [-681.089] (-721.365) (-731.328) -- 0:01:36
Average standard deviation of split frequencies: 0.008993
821000 -- (-687.664) (-732.884) (-729.534) [-683.512] * (-689.133) [-688.946] (-725.650) (-736.949) -- 0:01:35
822000 -- (-688.592) (-729.232) (-717.133) [-684.443] * (-686.666) [-686.592] (-716.355) (-724.361) -- 0:01:35
823000 -- [-686.117] (-729.465) (-721.296) (-681.645) * (-685.026) [-682.968] (-714.015) (-727.427) -- 0:01:34
824000 -- (-682.342) (-728.671) (-715.047) [-685.796] * [-678.609] (-681.557) (-727.208) (-737.246) -- 0:01:34
825000 -- [-688.520] (-741.545) (-724.007) (-678.665) * [-686.729] (-691.480) (-717.938) (-736.760) -- 0:01:33
Average standard deviation of split frequencies: 0.009112
826000 -- (-688.429) (-741.708) (-720.213) [-679.198] * (-700.142) [-680.237] (-712.383) (-741.871) -- 0:01:33
827000 -- (-687.084) (-745.635) (-723.561) [-680.607] * (-683.550) [-682.304] (-722.085) (-742.137) -- 0:01:32
828000 -- (-682.630) (-739.006) (-710.539) [-683.106] * (-686.354) [-690.736] (-713.445) (-734.875) -- 0:01:32
829000 -- (-681.283) (-737.603) (-717.634) [-678.129] * [-681.765] (-689.710) (-722.455) (-735.061) -- 0:01:31
830000 -- (-687.966) (-734.857) (-724.426) [-677.922] * (-683.078) [-681.947] (-731.017) (-723.543) -- 0:01:30
Average standard deviation of split frequencies: 0.009019
831000 -- [-677.843] (-729.731) (-722.176) (-684.897) * [-682.851] (-679.749) (-726.076) (-728.156) -- 0:01:30
832000 -- (-690.645) (-731.605) (-732.486) [-680.822] * (-685.384) [-693.695] (-715.358) (-736.478) -- 0:01:29
833000 -- (-694.087) (-731.441) (-718.054) [-685.888] * (-682.586) [-678.393] (-721.062) (-728.369) -- 0:01:29
834000 -- (-684.889) (-741.626) (-720.701) [-680.855] * (-684.555) [-678.462] (-736.026) (-716.308) -- 0:01:28
835000 -- [-682.544] (-733.847) (-704.176) (-689.353) * (-687.645) [-679.168] (-729.562) (-716.308) -- 0:01:28
Average standard deviation of split frequencies: 0.008982
836000 -- (-682.020) (-734.320) (-710.345) [-691.752] * (-686.769) [-683.609] (-719.847) (-723.198) -- 0:01:27
837000 -- (-676.780) (-732.181) (-715.416) [-681.317] * [-686.101] (-680.257) (-728.449) (-717.815) -- 0:01:27
838000 -- [-670.212] (-738.786) (-714.594) (-682.370) * [-691.941] (-688.023) (-736.567) (-711.662) -- 0:01:26
839000 -- (-690.382) (-738.297) (-721.161) [-681.315] * [-682.342] (-682.605) (-735.560) (-720.998) -- 0:01:25
840000 -- [-676.199] (-739.769) (-720.859) (-679.247) * [-686.278] (-688.950) (-720.250) (-720.588) -- 0:01:25
Average standard deviation of split frequencies: 0.008952
841000 -- (-696.367) (-732.975) (-726.438) [-673.556] * [-683.108] (-685.465) (-716.688) (-729.078) -- 0:01:24
842000 -- (-693.378) (-732.665) (-713.223) [-679.118] * (-676.316) [-688.769] (-716.848) (-724.838) -- 0:01:24
843000 -- (-678.526) (-734.763) (-707.254) [-674.386] * (-680.125) [-677.338] (-733.791) (-719.759) -- 0:01:23
844000 -- (-689.245) (-732.541) (-723.121) [-680.611] * (-680.858) [-680.649] (-721.625) (-735.137) -- 0:01:23
845000 -- (-684.562) (-731.677) (-730.913) [-677.532] * [-683.033] (-685.099) (-721.598) (-719.856) -- 0:01:22
Average standard deviation of split frequencies: 0.008608
846000 -- (-686.081) (-734.409) (-722.159) [-687.762] * (-679.699) [-682.153] (-720.460) (-717.681) -- 0:01:22
847000 -- [-682.044] (-747.308) (-722.610) (-684.827) * (-680.942) [-681.934] (-732.932) (-725.167) -- 0:01:21
848000 -- [-679.648] (-727.769) (-711.146) (-685.422) * [-679.264] (-690.801) (-728.924) (-720.000) -- 0:01:21
849000 -- [-673.978] (-742.434) (-723.650) (-685.535) * [-683.145] (-691.348) (-728.494) (-726.224) -- 0:01:20
850000 -- (-682.922) (-739.856) (-719.826) [-680.928] * [-679.986] (-692.162) (-720.215) (-719.568) -- 0:01:19
Average standard deviation of split frequencies: 0.008392
851000 -- (-691.097) (-739.468) (-720.215) [-678.216] * (-682.152) [-681.570] (-714.101) (-733.096) -- 0:01:19
852000 -- (-681.681) (-736.978) (-714.540) [-681.742] * [-676.566] (-688.728) (-726.382) (-733.225) -- 0:01:18
853000 -- (-688.571) (-736.021) (-722.455) [-687.748] * [-683.186] (-676.060) (-722.664) (-723.176) -- 0:01:18
854000 -- [-684.023] (-743.664) (-717.052) (-681.195) * (-688.988) [-680.946] (-719.030) (-730.667) -- 0:01:17
855000 -- (-678.084) (-732.761) (-729.134) [-681.654] * (-685.981) [-686.753] (-721.332) (-724.444) -- 0:01:17
Average standard deviation of split frequencies: 0.008697
856000 -- [-686.297] (-730.633) (-715.611) (-689.079) * [-689.132] (-694.345) (-721.509) (-725.902) -- 0:01:16
857000 -- [-683.860] (-729.454) (-719.708) (-679.918) * [-687.314] (-685.164) (-731.605) (-731.136) -- 0:01:16
858000 -- [-689.777] (-731.043) (-719.645) (-692.999) * (-696.543) [-687.746] (-724.084) (-734.112) -- 0:01:15
859000 -- (-692.830) (-733.072) (-727.962) [-683.329] * [-677.858] (-689.758) (-737.514) (-715.422) -- 0:01:15
860000 -- [-687.479] (-726.382) (-719.947) (-687.090) * [-679.346] (-688.447) (-720.006) (-717.126) -- 0:01:14
Average standard deviation of split frequencies: 0.008235
861000 -- [-677.684] (-739.298) (-716.327) (-688.195) * [-682.108] (-692.474) (-728.677) (-720.119) -- 0:01:13
862000 -- (-688.948) (-739.745) (-721.551) [-676.075] * (-684.240) [-683.013] (-729.063) (-728.854) -- 0:01:13
863000 -- (-692.164) (-745.254) (-728.497) [-680.116] * (-682.788) [-677.610] (-721.601) (-726.784) -- 0:01:12
864000 -- (-683.060) (-748.969) (-712.822) [-684.626] * [-685.224] (-678.114) (-718.764) (-723.523) -- 0:01:12
865000 -- [-686.077] (-745.322) (-716.848) (-682.415) * [-679.402] (-685.934) (-727.644) (-731.745) -- 0:01:11
Average standard deviation of split frequencies: 0.008301
866000 -- (-688.419) (-732.529) (-717.549) [-685.736] * (-684.146) [-681.622] (-717.706) (-726.864) -- 0:01:11
867000 -- (-688.574) (-731.259) (-715.821) [-680.290] * (-680.117) [-682.601] (-731.996) (-714.602) -- 0:01:10
868000 -- (-692.554) (-743.850) (-727.792) [-676.669] * [-682.789] (-675.673) (-735.935) (-718.764) -- 0:01:10
869000 -- (-679.857) (-738.294) (-711.199) [-675.807] * [-681.225] (-681.938) (-734.596) (-719.294) -- 0:01:09
870000 -- (-678.515) (-726.956) (-721.114) [-683.627] * (-688.694) [-675.615] (-728.927) (-730.113) -- 0:01:09
Average standard deviation of split frequencies: 0.008102
871000 -- (-681.130) (-734.897) (-729.311) [-679.545] * (-686.204) [-691.765] (-729.536) (-726.574) -- 0:01:08
872000 -- (-687.794) (-728.973) (-708.640) [-680.205] * [-682.806] (-694.587) (-726.229) (-720.404) -- 0:01:07
873000 -- [-684.111] (-741.359) (-712.054) (-682.305) * (-682.157) [-679.446] (-726.426) (-728.811) -- 0:01:07
874000 -- [-681.275] (-727.992) (-706.806) (-686.081) * (-685.204) [-685.412] (-734.007) (-723.663) -- 0:01:06
875000 -- [-679.166] (-732.077) (-716.002) (-678.750) * [-679.987] (-684.724) (-727.551) (-725.780) -- 0:01:06
Average standard deviation of split frequencies: 0.008168
876000 -- [-679.378] (-732.603) (-723.322) (-679.818) * [-678.295] (-682.486) (-728.337) (-715.138) -- 0:01:05
877000 -- [-685.101] (-735.666) (-719.323) (-692.589) * [-685.772] (-696.278) (-723.626) (-731.354) -- 0:01:05
878000 -- (-694.739) (-722.738) (-719.628) [-690.766] * [-686.299] (-693.544) (-716.263) (-723.903) -- 0:01:04
879000 -- [-684.072] (-738.109) (-718.474) (-692.464) * (-685.752) [-690.002] (-730.716) (-723.884) -- 0:01:04
880000 -- [-675.467] (-727.152) (-720.048) (-688.892) * [-684.682] (-683.057) (-720.443) (-721.928) -- 0:01:03
Average standard deviation of split frequencies: 0.008278
881000 -- (-675.484) (-740.407) (-721.300) [-681.681] * [-687.743] (-686.300) (-733.329) (-718.557) -- 0:01:03
882000 -- (-690.548) (-736.481) (-716.789) [-690.463] * [-687.224] (-687.675) (-728.834) (-714.473) -- 0:01:02
883000 -- [-675.921] (-740.990) (-716.250) (-689.997) * (-682.273) [-676.687] (-728.422) (-731.818) -- 0:01:02
884000 -- [-674.124] (-742.867) (-710.581) (-680.546) * (-687.346) [-680.074] (-722.185) (-720.146) -- 0:01:01
885000 -- (-684.326) (-725.555) (-718.500) [-674.856] * [-677.572] (-684.350) (-720.940) (-727.413) -- 0:01:00
Average standard deviation of split frequencies: 0.008342
886000 -- (-685.293) (-739.480) (-731.014) [-681.398] * [-685.103] (-678.423) (-722.832) (-718.480) -- 0:01:00
887000 -- [-682.884] (-734.543) (-721.326) (-674.413) * (-685.846) [-693.454] (-718.782) (-715.820) -- 0:00:59
888000 -- [-693.424] (-736.809) (-711.182) (-679.195) * (-681.085) [-691.452] (-730.076) (-719.413) -- 0:00:59
889000 -- (-694.245) (-739.729) (-715.504) [-675.502] * (-694.067) [-680.363] (-733.784) (-725.142) -- 0:00:58
890000 -- (-691.707) (-739.500) (-725.259) [-672.763] * [-687.242] (-682.710) (-732.778) (-720.766) -- 0:00:58
Average standard deviation of split frequencies: 0.008449
891000 -- [-688.130] (-731.439) (-725.412) (-686.284) * (-682.288) [-688.963] (-719.457) (-723.082) -- 0:00:57
892000 -- [-686.786] (-729.917) (-713.022) (-684.660) * (-678.674) [-686.282] (-723.912) (-717.110) -- 0:00:57
893000 -- (-678.401) (-735.954) (-724.224) [-685.725] * (-681.559) [-688.982] (-721.345) (-724.712) -- 0:00:56
894000 -- [-683.168] (-739.664) (-717.850) (-676.970) * (-684.277) [-682.595] (-722.889) (-726.841) -- 0:00:56
895000 -- (-684.550) (-733.811) (-726.688) [-683.660] * (-687.884) [-678.744] (-733.867) (-733.824) -- 0:00:55
Average standard deviation of split frequencies: 0.008211
896000 -- (-676.367) (-727.882) (-732.957) [-675.441] * (-682.173) [-682.708] (-725.793) (-718.989) -- 0:00:55
897000 -- [-682.005] (-736.183) (-733.965) (-685.468) * [-686.343] (-687.138) (-721.948) (-725.753) -- 0:00:54
898000 -- (-675.070) (-734.241) (-714.595) [-687.936] * (-681.176) [-686.755] (-727.196) (-720.029) -- 0:00:53
899000 -- (-688.599) (-739.453) (-714.270) [-681.304] * (-685.257) [-672.281] (-716.728) (-726.295) -- 0:00:53
900000 -- (-680.752) (-734.031) (-722.877) [-682.409] * (-682.457) [-677.970] (-725.797) (-723.473) -- 0:00:52
Average standard deviation of split frequencies: 0.008318
901000 -- (-687.702) (-725.438) (-720.315) [-682.185] * (-693.860) [-675.367] (-738.843) (-712.801) -- 0:00:52
902000 -- [-681.146] (-732.370) (-716.716) (-676.826) * (-682.975) [-674.229] (-729.801) (-725.693) -- 0:00:51
903000 -- [-684.124] (-729.170) (-713.372) (-684.402) * [-684.115] (-679.267) (-726.533) (-718.099) -- 0:00:51
904000 -- (-681.700) (-740.419) (-725.606) [-681.236] * [-684.234] (-692.134) (-723.161) (-715.172) -- 0:00:50
905000 -- (-692.948) (-723.554) (-723.735) [-682.954] * [-686.846] (-679.019) (-722.538) (-715.944) -- 0:00:50
Average standard deviation of split frequencies: 0.008176
906000 -- [-681.054] (-726.137) (-726.629) (-685.064) * (-685.341) [-686.770] (-727.277) (-722.028) -- 0:00:49
907000 -- (-679.428) (-728.687) (-718.503) [-683.922] * [-682.752] (-685.113) (-727.610) (-736.476) -- 0:00:49
908000 -- [-677.787] (-730.115) (-713.972) (-688.101) * (-691.198) [-677.209] (-720.578) (-732.521) -- 0:00:48
909000 -- (-684.417) (-732.514) (-718.441) [-681.976] * (-685.263) [-679.531] (-730.197) (-727.680) -- 0:00:48
910000 -- (-679.970) (-731.602) (-718.773) [-684.788] * (-680.471) [-682.681] (-720.105) (-727.557) -- 0:00:47
Average standard deviation of split frequencies: 0.008319
911000 -- (-688.562) (-737.851) (-724.374) [-679.970] * [-684.692] (-685.902) (-714.471) (-732.512) -- 0:00:46
912000 -- [-684.183] (-728.683) (-721.743) (-693.780) * (-684.772) [-676.419] (-723.207) (-725.808) -- 0:00:46
913000 -- (-679.515) (-728.683) (-726.653) [-678.657] * (-687.750) [-679.861] (-719.820) (-722.997) -- 0:00:45
914000 -- (-680.212) (-732.115) (-727.334) [-679.197] * (-683.218) [-674.213] (-727.816) (-724.431) -- 0:00:45
915000 -- (-673.045) (-742.006) (-726.015) [-681.208] * [-678.225] (-681.054) (-717.082) (-716.942) -- 0:00:44
Average standard deviation of split frequencies: 0.008400
916000 -- (-680.935) (-732.829) (-740.411) [-689.088] * (-679.222) [-676.974] (-723.059) (-723.584) -- 0:00:44
917000 -- [-676.099] (-736.374) (-717.787) (-684.284) * [-675.764] (-680.675) (-726.594) (-707.349) -- 0:00:43
918000 -- (-679.696) (-726.076) (-716.554) [-682.962] * [-677.905] (-677.616) (-712.721) (-724.608) -- 0:00:43
919000 -- (-688.624) (-729.077) (-713.479) [-679.407] * (-678.864) [-680.365] (-725.796) (-725.642) -- 0:00:42
920000 -- (-693.628) (-731.321) (-722.982) [-678.048] * [-684.046] (-682.835) (-729.711) (-719.669) -- 0:00:42
Average standard deviation of split frequencies: 0.008138
921000 -- (-686.729) (-741.488) (-717.588) [-681.028] * [-673.299] (-687.534) (-720.899) (-728.905) -- 0:00:41
922000 -- (-697.216) (-736.679) (-721.177) [-681.521] * (-686.646) [-684.262] (-728.561) (-722.047) -- 0:00:41
923000 -- (-682.990) (-736.404) (-716.198) [-695.152] * (-690.357) [-683.049] (-719.455) (-731.910) -- 0:00:40
924000 -- (-683.920) (-732.181) (-719.503) [-677.947] * [-681.972] (-687.378) (-726.322) (-728.642) -- 0:00:40
925000 -- (-681.376) (-732.224) (-719.604) [-675.630] * (-696.037) [-688.761] (-731.447) (-727.447) -- 0:00:39
Average standard deviation of split frequencies: 0.007945
926000 -- [-678.889] (-751.761) (-716.485) (-682.941) * [-693.466] (-686.220) (-725.055) (-725.225) -- 0:00:38
927000 -- (-685.642) (-734.049) (-717.235) [-678.796] * [-683.572] (-680.524) (-723.836) (-725.061) -- 0:00:38
928000 -- [-676.791] (-733.870) (-709.096) (-685.058) * [-673.107] (-680.557) (-721.606) (-735.157) -- 0:00:37
929000 -- (-686.930) (-732.508) (-714.332) [-679.410] * (-677.001) [-700.052] (-711.755) (-725.886) -- 0:00:37
930000 -- [-677.538] (-736.420) (-724.623) (-690.699) * [-682.183] (-692.281) (-721.983) (-727.172) -- 0:00:36
Average standard deviation of split frequencies: 0.007761
931000 -- (-679.403) (-732.275) (-718.332) [-679.524] * [-686.068] (-681.652) (-725.437) (-722.636) -- 0:00:36
932000 -- (-685.162) (-727.376) (-718.826) [-682.545] * (-683.569) [-691.025] (-727.999) (-717.498) -- 0:00:35
933000 -- [-689.865] (-726.708) (-717.043) (-692.525) * [-680.905] (-685.229) (-736.961) (-724.156) -- 0:00:35
934000 -- [-682.811] (-725.389) (-719.380) (-691.723) * [-675.510] (-679.583) (-737.918) (-720.315) -- 0:00:34
935000 -- (-694.181) (-743.784) (-719.825) [-688.447] * (-685.973) [-681.105] (-731.660) (-723.405) -- 0:00:34
Average standard deviation of split frequencies: 0.008040
936000 -- (-693.083) (-753.189) (-713.352) [-675.887] * (-684.185) [-682.732] (-732.655) (-722.278) -- 0:00:33
937000 -- (-694.613) (-743.605) (-721.559) [-678.691] * (-680.141) [-682.156] (-725.499) (-715.488) -- 0:00:33
938000 -- [-690.381] (-731.743) (-720.154) (-683.346) * [-685.436] (-685.011) (-729.068) (-715.798) -- 0:00:32
939000 -- [-687.160] (-740.779) (-713.218) (-676.546) * (-688.920) [-682.768] (-726.713) (-731.815) -- 0:00:32
940000 -- [-680.299] (-748.288) (-716.899) (-684.486) * (-685.685) [-682.044] (-716.707) (-722.563) -- 0:00:31
Average standard deviation of split frequencies: 0.007803
941000 -- [-683.681] (-754.591) (-716.329) (-679.802) * [-685.701] (-685.170) (-723.699) (-725.642) -- 0:00:31
942000 -- (-679.620) (-737.151) (-710.455) [-685.111] * [-679.657] (-687.948) (-736.378) (-724.821) -- 0:00:30
943000 -- [-683.599] (-730.238) (-716.567) (-685.544) * (-694.065) [-677.042] (-728.281) (-735.902) -- 0:00:29
944000 -- [-688.627] (-744.117) (-715.620) (-678.629) * (-679.513) [-687.878] (-727.315) (-724.296) -- 0:00:29
945000 -- [-682.815] (-737.495) (-719.197) (-682.764) * [-678.839] (-685.900) (-722.206) (-723.544) -- 0:00:28
Average standard deviation of split frequencies: 0.007866
946000 -- [-678.843] (-740.315) (-711.455) (-679.538) * [-678.450] (-683.024) (-731.850) (-724.517) -- 0:00:28
947000 -- (-681.241) (-740.678) (-715.410) [-684.871] * [-680.320] (-674.861) (-716.047) (-717.095) -- 0:00:27
948000 -- (-679.762) (-737.950) (-708.594) [-682.382] * (-680.048) [-675.912] (-729.497) (-713.720) -- 0:00:27
949000 -- (-679.823) (-735.599) (-713.267) [-678.561] * (-688.674) [-684.088] (-722.162) (-718.019) -- 0:00:26
950000 -- (-690.594) (-733.995) (-716.858) [-687.116] * [-684.623] (-681.959) (-717.800) (-722.440) -- 0:00:26
Average standard deviation of split frequencies: 0.007916
951000 -- (-684.182) (-735.742) (-712.412) [-680.203] * (-678.271) [-683.618] (-719.753) (-719.559) -- 0:00:25
952000 -- (-679.992) (-729.575) (-719.056) [-684.285] * (-682.082) [-680.343] (-741.724) (-714.238) -- 0:00:25
953000 -- [-681.276] (-745.318) (-709.392) (-679.083) * [-677.578] (-682.096) (-728.361) (-718.985) -- 0:00:24
954000 -- [-686.895] (-732.304) (-723.544) (-689.347) * (-691.123) [-681.582] (-710.084) (-737.153) -- 0:00:24
955000 -- (-680.617) (-742.367) (-714.588) [-692.209] * (-691.131) [-681.348] (-713.348) (-731.077) -- 0:00:23
Average standard deviation of split frequencies: 0.008048
956000 -- [-684.647] (-745.853) (-717.510) (-682.258) * [-678.206] (-684.713) (-734.984) (-728.275) -- 0:00:23
957000 -- (-682.600) (-741.906) (-724.590) [-679.285] * [-675.935] (-682.179) (-734.389) (-728.634) -- 0:00:22
958000 -- [-680.299] (-735.328) (-720.685) (-680.921) * (-685.268) [-676.004] (-725.191) (-731.878) -- 0:00:22
959000 -- [-689.176] (-736.701) (-710.046) (-689.546) * [-689.941] (-683.907) (-727.000) (-722.810) -- 0:00:21
960000 -- [-686.053] (-721.471) (-729.224) (-693.423) * [-674.484] (-686.213) (-710.663) (-726.910) -- 0:00:20
Average standard deviation of split frequencies: 0.007921
961000 -- [-683.392] (-731.585) (-743.796) (-680.517) * [-675.211] (-684.121) (-725.843) (-724.410) -- 0:00:20
962000 -- (-678.631) (-734.126) (-730.478) [-682.403] * (-684.615) [-677.966] (-732.192) (-724.842) -- 0:00:19
963000 -- (-681.987) (-730.992) (-719.316) [-693.567] * (-690.037) [-685.666] (-720.318) (-727.442) -- 0:00:19
964000 -- [-686.402] (-739.636) (-708.933) (-678.805) * (-681.560) [-678.021] (-720.658) (-718.939) -- 0:00:18
965000 -- (-680.424) (-733.042) (-722.196) [-679.182] * [-680.224] (-692.249) (-726.908) (-719.953) -- 0:00:18
Average standard deviation of split frequencies: 0.008035
966000 -- [-676.765] (-733.939) (-716.277) (-686.811) * [-684.951] (-672.568) (-726.909) (-723.845) -- 0:00:17
967000 -- (-686.699) (-737.705) (-725.516) [-678.671] * [-685.322] (-696.641) (-731.550) (-725.966) -- 0:00:17
968000 -- (-686.041) (-739.342) (-710.272) [-681.504] * [-686.208] (-688.891) (-727.026) (-726.251) -- 0:00:16
969000 -- (-692.877) (-741.450) (-720.243) [-689.777] * [-680.233] (-687.485) (-724.030) (-719.106) -- 0:00:16
970000 -- (-698.567) (-745.714) (-717.014) [-681.046] * [-688.033] (-684.814) (-732.590) (-725.773) -- 0:00:15
Average standard deviation of split frequencies: 0.008100
971000 -- (-687.159) (-738.701) (-717.306) [-686.730] * (-685.618) [-698.551] (-724.280) (-728.122) -- 0:00:15
972000 -- (-696.023) (-738.484) (-708.832) [-680.333] * (-692.097) [-688.361] (-720.786) (-725.965) -- 0:00:14
973000 -- [-677.791] (-735.470) (-714.586) (-691.648) * (-695.688) [-676.101] (-722.998) (-731.316) -- 0:00:14
974000 -- [-676.699] (-739.136) (-713.909) (-692.398) * [-680.618] (-680.146) (-721.910) (-726.927) -- 0:00:13
975000 -- [-679.116] (-731.824) (-716.868) (-687.407) * (-682.365) [-682.607] (-721.486) (-722.642) -- 0:00:13
Average standard deviation of split frequencies: 0.008228
976000 -- (-682.546) (-728.826) (-716.316) [-685.745] * (-680.036) [-681.216] (-717.096) (-727.262) -- 0:00:12
977000 -- [-675.209] (-741.795) (-709.920) (-686.096) * [-683.750] (-678.094) (-711.599) (-715.214) -- 0:00:12
978000 -- (-691.657) (-734.069) (-715.999) [-678.774] * (-681.988) [-679.832] (-720.650) (-720.380) -- 0:00:11
979000 -- (-679.525) (-743.511) (-722.179) [-688.360] * (-690.888) [-682.653] (-735.236) (-716.690) -- 0:00:11
980000 -- (-683.046) (-730.399) (-724.853) [-682.852] * (-694.277) [-678.566] (-719.483) (-721.290) -- 0:00:10
Average standard deviation of split frequencies: 0.008498
981000 -- [-676.227] (-728.823) (-721.491) (-690.354) * [-684.377] (-676.921) (-716.693) (-712.039) -- 0:00:09
982000 -- [-688.683] (-733.399) (-713.358) (-673.463) * [-682.187] (-688.770) (-725.414) (-721.130) -- 0:00:09
983000 -- [-674.573] (-726.163) (-720.534) (-684.370) * [-683.379] (-685.416) (-720.487) (-720.967) -- 0:00:08
984000 -- [-681.109] (-741.826) (-707.563) (-680.705) * (-682.289) [-685.527] (-716.726) (-715.995) -- 0:00:08
985000 -- [-679.760] (-727.710) (-718.772) (-691.305) * (-682.231) [-681.000] (-714.838) (-724.095) -- 0:00:07
Average standard deviation of split frequencies: 0.008452
986000 -- [-675.356] (-728.225) (-722.772) (-687.212) * (-688.872) [-680.885] (-722.754) (-725.855) -- 0:00:07
987000 -- (-686.099) (-744.500) (-718.175) [-683.487] * (-683.715) [-677.067] (-726.622) (-723.576) -- 0:00:06
988000 -- (-690.502) (-731.755) (-712.238) [-685.155] * [-679.899] (-679.139) (-720.836) (-719.106) -- 0:00:06
989000 -- (-677.169) (-731.329) (-710.858) [-685.783] * (-682.233) [-685.343] (-720.046) (-712.730) -- 0:00:05
990000 -- (-691.944) (-731.651) (-720.570) [-681.730] * [-685.509] (-693.669) (-730.329) (-723.935) -- 0:00:05
Average standard deviation of split frequencies: 0.008463
991000 -- [-683.715] (-724.938) (-733.575) (-681.243) * (-682.466) [-685.206] (-726.327) (-717.456) -- 0:00:04
992000 -- [-677.445] (-734.351) (-718.731) (-681.029) * [-682.962] (-684.438) (-722.501) (-722.964) -- 0:00:04
993000 -- [-679.853] (-730.342) (-713.149) (-681.927) * (-682.454) [-671.618] (-716.774) (-719.731) -- 0:00:03
994000 -- (-680.402) (-730.078) (-717.562) [-676.157] * [-679.772] (-680.545) (-720.959) (-723.967) -- 0:00:03
995000 -- (-677.204) (-730.003) (-715.303) [-679.833] * (-686.679) [-683.343] (-727.716) (-722.045) -- 0:00:02
Average standard deviation of split frequencies: 0.008519
996000 -- (-684.522) (-746.615) (-737.585) [-691.068] * [-679.713] (-684.251) (-732.174) (-716.501) -- 0:00:02
997000 -- (-689.746) (-730.733) (-719.866) [-685.772] * (-687.182) [-676.456] (-724.186) (-724.571) -- 0:00:01
998000 -- [-692.530] (-727.964) (-712.036) (-684.323) * (-684.787) [-687.108] (-729.969) (-727.067) -- 0:00:01
999000 -- [-679.489] (-728.552) (-720.791) (-684.622) * [-679.769] (-685.822) (-726.464) (-717.429) -- 0:00:00
1000000 -- (-682.585) (-730.029) (-710.670) [-689.582] * [-681.305] (-683.429) (-727.191) (-720.293) -- 0:00:00
Average standard deviation of split frequencies: 0.008665
Analysis completed in 8 mins 43 seconds
Analysis used 522.71 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -665.99
Likelihood of best state for "cold" chain of run 2 was -667.84
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
68.5 % ( 64 %) Dirichlet(Revmat{all})
83.2 % ( 66 %) Slider(Revmat{all})
37.3 % ( 24 %) Dirichlet(Pi{all})
38.8 % ( 27 %) Slider(Pi{all})
80.4 % ( 59 %) Multiplier(Alpha{1,2})
71.0 % ( 38 %) Multiplier(Alpha{3})
88.2 % ( 85 %) Slider(Pinvar{all})
70.4 % ( 62 %) ExtSPR(Tau{all},V{all})
61.0 % ( 57 %) ExtTBR(Tau{all},V{all})
75.1 % ( 64 %) NNI(Tau{all},V{all})
55.5 % ( 47 %) ParsSPR(Tau{all},V{all})
27.5 % ( 35 %) Multiplier(V{all})
78.6 % ( 75 %) Nodeslider(V{all})
26.9 % ( 18 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
68.9 % ( 70 %) Dirichlet(Revmat{all})
83.9 % ( 74 %) Slider(Revmat{all})
38.1 % ( 36 %) Dirichlet(Pi{all})
38.7 % ( 35 %) Slider(Pi{all})
81.8 % ( 60 %) Multiplier(Alpha{1,2})
72.2 % ( 49 %) Multiplier(Alpha{3})
88.6 % ( 64 %) Slider(Pinvar{all})
70.4 % ( 69 %) ExtSPR(Tau{all},V{all})
60.8 % ( 57 %) ExtTBR(Tau{all},V{all})
75.1 % ( 72 %) NNI(Tau{all},V{all})
55.5 % ( 52 %) ParsSPR(Tau{all},V{all})
27.6 % ( 26 %) Multiplier(V{all})
78.6 % ( 73 %) Nodeslider(V{all})
27.1 % ( 21 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.36 0.02 0.00
2 | 166952 0.09 0.00
3 | 166852 166272 0.20
4 | 166282 166723 166919
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.36 0.02 0.00
2 | 167290 0.10 0.00
3 | 166464 165917 0.25
4 | 166847 166250 167232
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -679.28
| 2 2 2 |
| 2 1 2 1 2 |
| 2 1 2 1 |
| 21 2 2 1 21 1 |
| 2 1 2 1* 12 22 1 22 2|
|* 12 1 12 1 2 12 2 2 2 1 1 1 |
| 1 2 * 2 1 11 1 2 2 12 * |
| 1 22 2 1*12 1 21 1 2 21 1 21 22 1 121|
| 11 1 1 1 |
| 1 11 2 1 1* 1 |
| 1 21 1 2 1 |
| 2 2 2 |
| 2 2 2 2 |
| |
| 1 2 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -684.74
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -674.84 -692.60
2 -674.29 -693.04
--------------------------------------
TOTAL -674.53 -692.84
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.103102 0.000525 0.061581 0.149193 0.101024 1329.14 1383.99 1.000
r(A<->C){all} 0.131387 0.004652 0.023319 0.269231 0.120783 187.27 218.42 1.005
r(A<->G){all} 0.142683 0.004573 0.025689 0.276886 0.132121 231.56 274.41 1.000
r(A<->T){all} 0.171495 0.004495 0.058897 0.305522 0.161596 139.97 239.53 1.001
r(C<->G){all} 0.033746 0.001128 0.000008 0.101200 0.023514 340.55 370.42 1.000
r(C<->T){all} 0.361217 0.007661 0.204502 0.536175 0.358611 293.52 311.81 1.000
r(G<->T){all} 0.159472 0.003627 0.057656 0.277762 0.151172 229.51 291.88 1.000
pi(A){all} 0.198602 0.000440 0.158771 0.239433 0.197852 717.17 898.55 1.000
pi(C){all} 0.223892 0.000469 0.182901 0.266706 0.222984 905.84 1009.21 1.000
pi(G){all} 0.245029 0.000527 0.201416 0.292622 0.244926 794.23 879.16 1.000
pi(T){all} 0.332477 0.000600 0.284229 0.378570 0.332514 987.18 1006.73 1.000
alpha{1,2} 0.495748 0.405915 0.000190 1.742699 0.272084 634.54 716.04 1.001
alpha{3} 1.510256 1.299298 0.002161 3.715868 1.237413 1045.64 1072.09 1.001
pinvar{all} 0.385854 0.038984 0.000337 0.695691 0.394868 612.29 671.12 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C65
2 -- C619
3 -- C295
4 -- C196
5 -- C93
6 -- C597
7 -- C208
8 -- C75
9 -- C651
10 -- C337
11 -- C545
12 -- C224
13 -- C60
14 -- C312
15 -- C628
16 -- C627
17 -- C389
18 -- C284
19 -- C117
20 -- C380
21 -- C68
22 -- C165
23 -- C129
24 -- C315
25 -- C493
26 -- C381
27 -- C584
28 -- C561
29 -- C411
30 -- C596
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------------------------
1 -- .*****************************
2 -- .*............................
3 -- ..*...........................
4 -- ...*..........................
5 -- ....*.........................
6 -- .....*........................
7 -- ......*.......................
8 -- .......*......................
9 -- ........*.....................
10 -- .........*....................
11 -- ..........*...................
12 -- ...........*..................
13 -- ............*.................
14 -- .............*................
15 -- ..............*...............
16 -- ...............*..............
17 -- ................*.............
18 -- .................*............
19 -- ..................*...........
20 -- ...................*..........
21 -- ....................*.........
22 -- .....................*........
23 -- ......................*.......
24 -- .......................*......
25 -- ........................*.....
26 -- .........................*....
27 -- ..........................*...
28 -- ...........................*..
29 -- ............................*.
30 -- .............................*
31 -- .....*.........*..............
32 -- ......*.*...........*.........
33 -- ...*.....*.........*.*........
34 -- .**.**....**..****.....*******
35 -- .........*.........*.*........
36 -- .*****...***..****.*.*.*******
37 -- .*****...***..******.*.*******
38 -- ......***...**......*.*.......
39 -- ........*...........*.........
40 -- ......*.............*.........
41 -- ...................*.*........
42 -- ......*.*.....................
43 -- .........*...........*........
44 -- .........*.........*..........
45 -- ......***...**....*.*.*.......
46 -- .*****************.***********
47 -- .............*........*.......
48 -- .......*....*.................
49 -- ............**................
50 -- .......*..............*.......
51 -- ......*.*...*.......*.........
52 -- ......*.*....*......*.........
53 -- .......*.....*................
54 -- ......*.*...........*.*.......
55 -- ......***...........*.........
56 -- ............*.........*.......
57 -- ......***...**......*.........
58 -- .......*....**........*.......
------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 3002 1.000000 0.000000 1.000000 1.000000 2
33 3002 1.000000 0.000000 1.000000 1.000000 2
34 2966 0.988008 0.002827 0.986009 0.990007 2
35 2592 0.863424 0.021670 0.848101 0.878748 2
36 2467 0.821785 0.022141 0.806129 0.837442 2
37 1805 0.601266 0.007066 0.596269 0.606262 2
38 1705 0.567955 0.000471 0.567622 0.568288 2
39 1020 0.339773 0.005653 0.335776 0.343771 2
40 1019 0.339440 0.008009 0.333777 0.345103 2
41 977 0.325450 0.013662 0.315789 0.335110 2
42 963 0.320786 0.013662 0.311126 0.330446 2
43 942 0.313791 0.015075 0.303131 0.324450 2
44 895 0.298135 0.016488 0.286476 0.309793 2
45 478 0.159227 0.002827 0.157229 0.161226 2
46 442 0.147235 0.024497 0.129913 0.164557 2
47 408 0.135909 0.011306 0.127915 0.143904 2
48 399 0.132911 0.005182 0.129247 0.136576 2
49 378 0.125916 0.002827 0.123917 0.127915 2
50 376 0.125250 0.008480 0.119254 0.131246 2
51 375 0.124917 0.005182 0.121252 0.128581 2
52 365 0.121586 0.014604 0.111259 0.131912 2
53 365 0.121586 0.003298 0.119254 0.123917 2
54 360 0.119920 0.002827 0.117921 0.121919 2
55 353 0.117588 0.012719 0.108594 0.126582 2
56 353 0.117588 0.009893 0.110593 0.124584 2
57 329 0.109594 0.005182 0.105929 0.113258 2
58 295 0.098268 0.007066 0.093271 0.103264 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.003466 0.000005 0.000240 0.007599 0.003041 1.000 2
length{all}[2] 0.001130 0.000001 0.000000 0.003463 0.000761 1.000 2
length{all}[3] 0.001147 0.000001 0.000000 0.003395 0.000787 1.000 2
length{all}[4] 0.006155 0.000010 0.001310 0.012326 0.005652 1.000 2
length{all}[5] 0.001143 0.000001 0.000000 0.003425 0.000784 1.001 2
length{all}[6] 0.001171 0.000002 0.000000 0.003580 0.000792 1.001 2
length{all}[7] 0.001202 0.000001 0.000000 0.003558 0.000805 1.000 2
length{all}[8] 0.002385 0.000003 0.000006 0.005775 0.001964 1.001 2
length{all}[9] 0.002349 0.000003 0.000026 0.005787 0.001924 1.001 2
length{all}[10] 0.001217 0.000002 0.000005 0.003913 0.000776 1.000 2
length{all}[11] 0.001151 0.000001 0.000000 0.003460 0.000775 1.000 2
length{all}[12] 0.001168 0.000001 0.000000 0.003582 0.000786 1.000 2
length{all}[13] 0.002342 0.000003 0.000040 0.005807 0.001902 1.000 2
length{all}[14] 0.001153 0.000001 0.000000 0.003534 0.000793 1.001 2
length{all}[15] 0.001202 0.000001 0.000000 0.003603 0.000809 1.000 2
length{all}[16] 0.001163 0.000002 0.000000 0.003569 0.000784 1.000 2
length{all}[17] 0.003521 0.000005 0.000295 0.007728 0.003043 1.000 2
length{all}[18] 0.001145 0.000001 0.000000 0.003411 0.000779 1.000 2
length{all}[19] 0.001228 0.000002 0.000000 0.003780 0.000818 1.000 2
length{all}[20] 0.001172 0.000002 0.000000 0.003541 0.000798 1.000 2
length{all}[21] 0.003530 0.000005 0.000323 0.007721 0.003068 1.000 2
length{all}[22] 0.001179 0.000001 0.000000 0.003587 0.000806 1.000 2
length{all}[23] 0.002339 0.000003 0.000050 0.005916 0.001891 1.000 2
length{all}[24] 0.001168 0.000002 0.000001 0.003615 0.000754 1.000 2
length{all}[25] 0.001155 0.000001 0.000000 0.003524 0.000786 1.000 2
length{all}[26] 0.001189 0.000002 0.000000 0.003717 0.000793 1.000 2
length{all}[27] 0.002322 0.000003 0.000058 0.005756 0.001906 1.003 2
length{all}[28] 0.001164 0.000001 0.000000 0.003529 0.000793 1.000 2
length{all}[29] 0.001135 0.000001 0.000000 0.003444 0.000763 1.000 2
length{all}[30] 0.001155 0.000001 0.000001 0.003523 0.000799 1.000 2
length{all}[31] 0.003519 0.000005 0.000285 0.007477 0.003083 1.000 2
length{all}[32] 0.004857 0.000007 0.000759 0.009952 0.004374 1.000 2
length{all}[33] 0.007528 0.000012 0.001529 0.014186 0.006936 1.000 2
length{all}[34] 0.003735 0.000005 0.000162 0.008056 0.003239 1.000 2
length{all}[35] 0.002401 0.000004 0.000004 0.006148 0.001939 1.000 2
length{all}[36] 0.002409 0.000004 0.000005 0.006009 0.001961 1.000 2
length{all}[37] 0.002083 0.000003 0.000001 0.005429 0.001654 1.000 2
length{all}[38] 0.002252 0.000003 0.000022 0.005739 0.001839 1.001 2
length{all}[39] 0.001127 0.000001 0.000002 0.003418 0.000777 0.999 2
length{all}[40] 0.001181 0.000002 0.000004 0.003503 0.000782 1.000 2
length{all}[41] 0.001193 0.000002 0.000003 0.003696 0.000781 0.999 2
length{all}[42] 0.001190 0.000002 0.000001 0.003709 0.000781 0.999 2
length{all}[43] 0.001136 0.000001 0.000001 0.003609 0.000759 1.000 2
length{all}[44] 0.001132 0.000001 0.000000 0.003251 0.000778 1.001 2
length{all}[45] 0.001322 0.000002 0.000001 0.004008 0.000909 0.998 2
length{all}[46] 0.001229 0.000001 0.000000 0.003293 0.000916 0.999 2
length{all}[47] 0.001205 0.000002 0.000003 0.003664 0.000836 0.998 2
length{all}[48] 0.001189 0.000001 0.000004 0.003864 0.000829 0.998 2
length{all}[49] 0.001116 0.000002 0.000002 0.003200 0.000764 0.999 2
length{all}[50] 0.001193 0.000001 0.000000 0.003620 0.000806 1.003 2
length{all}[51] 0.001006 0.000001 0.000000 0.003148 0.000608 0.998 2
length{all}[52] 0.001146 0.000002 0.000004 0.003779 0.000751 1.006 2
length{all}[53] 0.001068 0.000001 0.000001 0.003342 0.000723 0.997 2
length{all}[54] 0.001146 0.000002 0.000008 0.003559 0.000814 0.998 2
length{all}[55] 0.001122 0.000001 0.000000 0.003765 0.000702 0.999 2
length{all}[56] 0.001202 0.000001 0.000000 0.003807 0.000829 0.997 2
length{all}[57] 0.001107 0.000001 0.000001 0.003457 0.000789 0.998 2
length{all}[58] 0.001105 0.000001 0.000009 0.003334 0.000720 1.000 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.008665
Maximum standard deviation of split frequencies = 0.024497
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.006
Clade credibility values:
/--------------------------------------------------------------------- C65 (1)
|
| /---------------------------- C619 (2)
| |
| |---------------------------- C295 (3)
| |
| |---------------------------- C93 (5)
| |
| | /-------------- C597 (6)
| |-----100-----+
| | \-------------- C627 (16)
| |
| |---------------------------- C545 (11)
| |
| |---------------------------- C224 (12)
| |
| |---------------------------- C628 (15)
| |
| /-----99-----+---------------------------- C389 (17)
| | |
| | |---------------------------- C284 (18)
| | |
| | |---------------------------- C315 (24)
| | |
| | |---------------------------- C493 (25)
| | |
| | |---------------------------- C381 (26)
+ | |
| /------82-----+ |---------------------------- C584 (27)
| | | |
| | | |---------------------------- C561 (28)
| | | |
| | | |---------------------------- C411 (29)
| | | |
| | | \---------------------------- C596 (30)
| | |
|------60-----+ | /---------------------------- C196 (4)
| | | |
| | \-----100----+ /-------------- C337 (10)
| | | |
| | \------86-----+-------------- C380 (20)
| | |
| | \-------------- C165 (22)
| |
| \------------------------------------------------------- C117 (19)
|
| /-------------- C208 (7)
| |
| /-----100-----+-------------- C651 (9)
| | |
| | \-------------- C68 (21)
| |
| |---------------------------- C75 (8)
\-------------------57-------------------+
|---------------------------- C60 (13)
|
|---------------------------- C312 (14)
|
\---------------------------- C129 (23)
Phylogram (based on average branch lengths):
/------------- C65 (1)
|
| /--- C619 (2)
| |
| |--- C295 (3)
| |
| |--- C93 (5)
| |
| | /--- C597 (6)
| |------------+
| | \--- C627 (16)
| |
| |--- C545 (11)
| |
| |--- C224 (12)
| |
| |--- C628 (15)
| |
| /-------------+------------- C389 (17)
| | |
| | |--- C284 (18)
| | |
| | |--- C315 (24)
| | |
| | |--- C493 (25)
| | |
| | |--- C381 (26)
+ | |
| /--------+ |-------- C584 (27)
| | | |
| | | |--- C561 (28)
| | | |
| | | |--- C411 (29)
| | | |
| | | \--- C596 (30)
| | |
|------+ | /------------------------ C196 (4)
| | | |
| | \-----------------------------+ /--- C337 (10)
| | | |
| | \-------+--- C380 (20)
| | |
| | \--- C165 (22)
| |
| \---- C117 (19)
|
| /--- C208 (7)
| |
| /------------------+-------- C651 (9)
| | |
| | \------------- C68 (21)
| |
| |-------- C75 (8)
\-------+
|-------- C60 (13)
|
|--- C312 (14)
|
\-------- C129 (23)
|-------| 0.002 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Thu Nov 17 16:36:25 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/LZW_L_VIPR_ALG4_672096710_293_622_1_2012_02_China_Swine_PEDV.result--
-- Starting log on Fri Nov 18 05:12:13 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/LZW_L_VIPR_ALG4_672096710_293_622_1_2012_02_China_Swine_PEDV.result/original_alignment/codeml,LZW_L_VIPR_ALG4_672096710_293_622_1_2012_02_China_Swine_PEDV.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C312 330 sites
reading seq# 2 C627 330 sites
reading seq# 3 C628 330 sites
reading seq# 4 C545 330 sites
reading seq# 5 C284 330 sites
reading seq# 6 C389 330 sites
reading seq# 7 C117 330 sites
reading seq# 8 C60 330 sites
reading seq# 9 C561 330 sites
reading seq#10 C380 330 sites
reading seq#11 C619 330 sites
reading seq#12 C65 330 sites
reading seq#13 C295 330 sites
reading seq#14 C68 330 sites
reading seq#15 C165 330 sites
reading seq#16 C93 330 sites
reading seq#17 C196 330 sites
reading seq#18 C597 330 sites
reading seq#19 C315 330 sites
reading seq#20 C129 330 sites
reading seq#21 C75 330 sites
reading seq#22 C208 330 sites
reading seq#23 C381 330 sites
reading seq#24 C584 330 sites
reading seq#25 C493 330 sites
reading seq#26 C337 330 sites
reading seq#27 C651 330 sites
reading seq#28 C596 330 sites
reading seq#29 C411 330 sites
reading seq#30 C224 330 sitesns = 30 ls = 330
Reading sequences, sequential format..
Reading seq # 1: C312
Reading seq # 2: C627
Reading seq # 3: C628
Reading seq # 4: C545
Reading seq # 5: C284
Reading seq # 6: C389
Reading seq # 7: C117
Reading seq # 8: C60
Reading seq # 9: C561
Reading seq #10: C380
Reading seq #11: C619
Reading seq #12: C65
Reading seq #13: C295
Reading seq #14: C68
Reading seq #15: C165
Reading seq #16: C93
Reading seq #17: C196
Reading seq #18: C597
Reading seq #19: C315
Reading seq #20: C129
Reading seq #21: C75
Reading seq #22: C208
Reading seq #23: C381
Reading seq #24: C584
Reading seq #25: C493
Reading seq #26: C337
Reading seq #27: C651
Reading seq #28: C596
Reading seq #29: C411
Reading seq #30: C224
Sequences read..
Counting site patterns.. 0:00
Compressing, 65 patterns at 110 / 110 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 65 patterns at 110 / 110 sites (100.0%), 0:00
Counting codons..
3480 bytes for distance
63440 bytes for conP
5720 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(12, (((11, 13, 16, (18, 2), 4, 30, 3, 6, 5, 19, 25, 23, 24, 9, 29, 28), (17, (26, 10, 15))), 7), ((22, 27, 14), 21, 8, 1, 20)); MP score: 30
285480 bytes for conP, adjusted
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
34
0.086196 0.064950 0.033931 0.099960 0.044670 0.033553 0.068411 0.090371 0.033065 0.105804 0.085915 0.078998 0.108656 0.014251 0.012859 0.059043 0.026855 0.082768 0.107263 0.059696 0.067204 0.066442 0.077668 0.072109 0.087010 0.031986 0.085155 0.086981 0.032297 0.064621 0.045658 0.067217 0.010777 0.062352 0.024758 0.054065 0.106513 0.053592 0.300000 0.828586 0.451010
ntime & nrate & np: 38 2 41
Bounds (np=41):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 12.114106
np = 41
lnL0 = -830.117793
Iterating by ming2
Initial: fx= 830.117793
x= 0.08620 0.06495 0.03393 0.09996 0.04467 0.03355 0.06841 0.09037 0.03307 0.10580 0.08591 0.07900 0.10866 0.01425 0.01286 0.05904 0.02686 0.08277 0.10726 0.05970 0.06720 0.06644 0.07767 0.07211 0.08701 0.03199 0.08515 0.08698 0.03230 0.06462 0.04566 0.06722 0.01078 0.06235 0.02476 0.05406 0.10651 0.05359 0.30000 0.82859 0.45101
1 h-m-p 0.0000 0.0001 526.1854 ++ 793.810881 m 0.0001 46 | 1/41
2 h-m-p 0.0000 0.0000 8074.1890 ++ 758.140205 m 0.0000 90 | 2/41
3 h-m-p 0.0000 0.0000 17213.5671 ++ 745.769151 m 0.0000 134 | 3/41
4 h-m-p 0.0000 0.0000 17671.6806 ++ 744.659991 m 0.0000 178 | 4/41
5 h-m-p 0.0000 0.0000 1286.8991 ++ 743.399371 m 0.0000 222 | 5/41
6 h-m-p 0.0000 0.0000 1241.7759 ++ 742.406898 m 0.0000 266 | 6/41
7 h-m-p 0.0000 0.0001 798.4409 ++ 720.013010 m 0.0001 310 | 7/41
8 h-m-p 0.0000 0.0001 1579.9752 ++ 695.036494 m 0.0001 354 | 8/41
9 h-m-p 0.0000 0.0000 4056.5350 ++ 694.008796 m 0.0000 398 | 9/41
10 h-m-p 0.0000 0.0000 65213.1874 ++ 684.254500 m 0.0000 442 | 10/41
11 h-m-p 0.0000 0.0000 287917.9834 ++ 683.219372 m 0.0000 486 | 11/41
12 h-m-p 0.0000 0.0000 2899.4039 ++ 682.831839 m 0.0000 530 | 12/41
13 h-m-p 0.0000 0.0000 16356.8126 ++ 681.888336 m 0.0000 574 | 13/41
14 h-m-p 0.0000 0.0000 5410.8387 ++ 671.234111 m 0.0000 618 | 14/41
15 h-m-p 0.0000 0.0000 2524.1211 ++ 667.911225 m 0.0000 662 | 15/41
16 h-m-p 0.0000 0.0000 1989.2402 ++ 665.621422 m 0.0000 706 | 16/41
17 h-m-p 0.0000 0.0000 1636.3467 ++ 665.328255 m 0.0000 750 | 17/41
18 h-m-p 0.0000 0.0000 1415.4866 ++ 664.392598 m 0.0000 794 | 18/41
19 h-m-p 0.0000 0.0000 2312.7129 ++ 657.140903 m 0.0000 838 | 19/41
20 h-m-p 0.0000 0.0000 445.5269 ++ 656.974247 m 0.0000 882 | 20/41
21 h-m-p 0.0000 0.0000 577.5657 ++ 656.707534 m 0.0000 926 | 21/41
22 h-m-p 0.0000 0.0009 56.2721 +++ 652.836438 m 0.0009 971 | 22/41
23 h-m-p 0.0002 0.0011 80.1223 +YYCCCC 650.932263 5 0.0007 1024 | 22/41
24 h-m-p 0.0008 0.0041 35.9329 +YYCCCC 648.584022 5 0.0025 1077 | 21/41
25 h-m-p 0.0001 0.0006 95.8328 YCCC 648.238751 3 0.0003 1126 | 21/41
26 h-m-p 0.0001 0.0003 69.2212 +YCCC 648.027223 3 0.0002 1176 | 21/41
27 h-m-p 0.0003 0.0013 10.0741 YC 647.987150 1 0.0006 1221 | 21/41
28 h-m-p 0.0050 0.0342 1.1454 +YYYYCCCCC 647.159019 8 0.0216 1278 | 21/41
29 h-m-p 0.0003 0.0017 24.0425 YCCCC 646.926595 4 0.0007 1329 | 21/41
30 h-m-p 0.0026 0.0129 3.4626 ++ 646.596257 m 0.0129 1373 | 21/41
31 h-m-p 0.0238 0.1835 1.8865 +YCYCCC 644.045526 5 0.1073 1426 | 21/41
32 h-m-p 0.0153 0.0763 1.0252 +YCYCCC 642.980510 5 0.0441 1479 | 21/41
33 h-m-p 0.0133 0.0667 1.1806 +YCYCCC 642.185031 5 0.0401 1532 | 21/41
34 h-m-p 0.0085 0.0425 0.6660 ++ 641.337250 m 0.0425 1576 | 22/41
35 h-m-p 0.0113 0.1331 2.4874 +YCCCCC 640.017891 5 0.0517 1650 | 22/41
36 h-m-p 0.0318 0.1588 1.3473 YCCCC 638.925618 4 0.0817 1701 | 22/41
37 h-m-p 0.0525 0.2624 0.9101 YCCCCC 637.605352 5 0.1093 1754 | 22/41
38 h-m-p 0.1876 0.9381 0.3532 YCCC 636.481921 3 0.3620 1822 | 22/41
39 h-m-p 0.1655 0.8273 0.2290 YCCCC 635.766067 4 0.3431 1892 | 21/41
40 h-m-p 0.0016 0.0082 16.6781 -CCC 635.761968 2 0.0001 1960 | 21/41
41 h-m-p 0.0073 0.2958 0.2121 +++ 635.399398 m 0.2958 2005 | 21/41
42 h-m-p 0.0000 0.0000 0.1470
h-m-p: 6.59713261e-18 3.29856631e-17 1.46958716e-01 635.399398
.. | 21/41
43 h-m-p 0.0000 0.0005 52.3360 ++YCC 635.247472 2 0.0001 2135 | 21/41
44 h-m-p 0.0000 0.0000 20.1194 ++ 635.247327 m 0.0000 2179 | 22/41
45 h-m-p 0.0000 0.0038 12.4386 ++CC 635.238911 1 0.0002 2227 | 22/41
46 h-m-p 0.0003 0.0113 7.2986 YC 635.229333 1 0.0005 2272 | 22/41
47 h-m-p 0.0002 0.0080 18.1172 +YC 635.207906 1 0.0006 2318 | 22/41
48 h-m-p 0.0004 0.0090 28.0288 YCC 635.171961 2 0.0006 2365 | 22/41
49 h-m-p 0.0003 0.0040 55.5247 CC 635.137586 1 0.0003 2411 | 22/41
50 h-m-p 0.0004 0.0027 44.9691 YCC 635.119234 2 0.0002 2458 | 22/41
51 h-m-p 0.0009 0.0123 10.6445 CC 635.114578 1 0.0003 2504 | 22/41
52 h-m-p 0.0004 0.0080 7.0824 YC 635.111988 1 0.0003 2549 | 22/41
53 h-m-p 0.0002 0.0075 11.2655 +CCC 635.098287 2 0.0011 2598 | 22/41
54 h-m-p 0.0018 0.0130 6.8762 CC 635.095652 1 0.0004 2644 | 22/41
55 h-m-p 0.0005 0.0106 5.6991 CC 635.094848 1 0.0002 2690 | 22/41
56 h-m-p 0.0004 0.0986 2.7183 YC 635.093515 1 0.0008 2735 | 22/41
57 h-m-p 0.0002 0.0468 9.2716 ++CC 635.067905 1 0.0047 2783 | 22/41
58 h-m-p 0.0003 0.0017 127.9403 YCC 635.052941 2 0.0002 2830 | 22/41
59 h-m-p 0.0005 0.0094 47.2805 CCC 635.029135 2 0.0009 2878 | 22/41
60 h-m-p 0.0003 0.0081 153.5956 +CYC 634.930030 2 0.0012 2926 | 22/41
61 h-m-p 0.0007 0.0036 34.7430 YC 634.927820 1 0.0001 2971 | 22/41
62 h-m-p 0.0012 0.0228 3.4437 YC 634.927541 1 0.0002 3016 | 22/41
63 h-m-p 0.0233 7.5673 0.0251 +++C 634.902652 0 1.4944 3063 | 22/41
64 h-m-p 1.6000 8.0000 0.0059 YC 634.901664 1 1.2662 3127 | 22/41
65 h-m-p 1.6000 8.0000 0.0015 YC 634.901619 1 1.0596 3191 | 22/41
66 h-m-p 1.6000 8.0000 0.0001 Y 634.901618 0 1.0022 3254 | 22/41
67 h-m-p 1.6000 8.0000 0.0000 Y 634.901618 0 1.1438 3317 | 22/41
68 h-m-p 1.6000 8.0000 0.0000 Y 634.901618 0 1.0135 3380 | 22/41
69 h-m-p 1.6000 8.0000 0.0000 --C 634.901618 0 0.0246 3445 | 22/41
70 h-m-p 0.0222 8.0000 0.0000 -------------.. | 22/41
71 h-m-p 0.0160 8.0000 0.0002 -------C 634.901618 0 0.0000 3589
Out..
lnL = -634.901618
3590 lfun, 10770 eigenQcodon, 272840 P(t)
end of tree file.
Time used: 1:19
Model 2: PositiveSelection
TREE # 1
(12, (((11, 13, 16, (18, 2), 4, 30, 3, 6, 5, 19, 25, 23, 24, 9, 29, 28), (17, (26, 10, 15))), 7), ((22, 27, 14), 21, 8, 1, 20)); MP score: 30
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
34
0.090976 0.049060 0.077938 0.038184 0.060172 0.013894 0.048036 0.027704 0.102528 0.020913 0.090719 0.080098 0.077236 0.020980 0.081650 0.033534 0.057724 0.041375 0.069494 0.107324 0.069957 0.098151 0.099319 0.098791 0.030250 0.083377 0.065989 0.101136 0.062276 0.063232 0.064715 0.015732 0.047963 0.097870 0.080970 0.107302 0.041969 0.069002 1.653739 1.069385 0.176934 0.277641 1.471943
ntime & nrate & np: 38 3 43
Bounds (np=43):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 6.051904
np = 43
lnL0 = -790.116994
Iterating by ming2
Initial: fx= 790.116994
x= 0.09098 0.04906 0.07794 0.03818 0.06017 0.01389 0.04804 0.02770 0.10253 0.02091 0.09072 0.08010 0.07724 0.02098 0.08165 0.03353 0.05772 0.04138 0.06949 0.10732 0.06996 0.09815 0.09932 0.09879 0.03025 0.08338 0.06599 0.10114 0.06228 0.06323 0.06471 0.01573 0.04796 0.09787 0.08097 0.10730 0.04197 0.06900 1.65374 1.06939 0.17693 0.27764 1.47194
1 h-m-p 0.0000 0.0002 406.1575 +++ 759.145702 m 0.0002 49 | 1/43
2 h-m-p 0.0000 0.0000 5912.9261 ++ 755.313455 m 0.0000 95 | 2/43
3 h-m-p 0.0000 0.0000 7634.3203 ++ 745.032398 m 0.0000 141 | 3/43
4 h-m-p 0.0000 0.0002 443.5306 ++ 726.401060 m 0.0002 187 | 4/43
5 h-m-p 0.0000 0.0002 202.4819 ++ 717.684125 m 0.0002 233 | 5/43
6 h-m-p 0.0000 0.0000 1136.9135 ++ 716.704226 m 0.0000 279 | 6/43
7 h-m-p 0.0000 0.0000 953.2059 ++ 710.413108 m 0.0000 325 | 7/43
8 h-m-p 0.0000 0.0000 3507.2574 ++ 701.354240 m 0.0000 371 | 8/43
9 h-m-p 0.0000 0.0000 365.2120 ++ 699.179227 m 0.0000 417 | 9/43
10 h-m-p 0.0000 0.0000 1328.5068 ++ 697.593486 m 0.0000 463 | 10/43
11 h-m-p 0.0000 0.0000 406603.4898 ++ 694.849575 m 0.0000 509 | 11/43
12 h-m-p 0.0000 0.0000 2291.1814 ++ 691.499653 m 0.0000 555 | 12/43
13 h-m-p 0.0000 0.0000 39798.7484 ++ 686.688491 m 0.0000 601 | 13/43
14 h-m-p 0.0000 0.0000 3191.0673 ++ 684.998198 m 0.0000 647 | 14/43
15 h-m-p 0.0000 0.0000 4402.3234 ++ 684.193922 m 0.0000 693 | 15/43
16 h-m-p 0.0000 0.0000 1699.7766 ++ 683.787971 m 0.0000 739 | 16/43
17 h-m-p 0.0000 0.0000 1996.6836 ++ 680.729132 m 0.0000 785 | 17/43
18 h-m-p 0.0000 0.0000 1856.9335 ++ 678.431232 m 0.0000 831 | 18/43
19 h-m-p 0.0000 0.0000 761.8706 ++ 677.967453 m 0.0000 877 | 19/43
20 h-m-p 0.0000 0.0000 548.8472 ++ 677.587972 m 0.0000 923 | 20/43
21 h-m-p 0.0000 0.0000 449.8253 ++ 677.113889 m 0.0000 969 | 21/43
22 h-m-p 0.0001 0.0006 53.9325 ++ 674.051952 m 0.0006 1015 | 22/43
23 h-m-p 0.0008 0.0045 41.6293 +CYYYYYCCCC 660.467757 10 0.0042 1077 | 21/43
24 h-m-p 0.0000 0.0002 317.2396 +YYCCCC 658.860597 5 0.0001 1132 | 21/43
25 h-m-p 0.0000 0.0002 151.5259 ++ 657.190768 m 0.0002 1178 | 22/43
26 h-m-p 0.0003 0.0016 89.6125 +YYCYCC 654.773815 5 0.0011 1232 | 22/43
27 h-m-p 0.0000 0.0002 455.2786 +YYCC 653.809438 3 0.0001 1283 | 22/43
28 h-m-p 0.0001 0.0003 567.1973 +YYCCCC 652.024020 5 0.0002 1338 | 22/43
29 h-m-p 0.0007 0.0037 43.2209 YCYCCC 650.969696 5 0.0017 1392 | 22/43
30 h-m-p 0.0011 0.0054 21.9599 +YCYCCC 649.472510 5 0.0032 1447 | 21/43
31 h-m-p 0.0001 0.0004 273.1819 YCCC 648.923384 3 0.0001 1498 | 21/43
32 h-m-p 0.0002 0.0008 144.7767 +YCYCCC 647.699445 5 0.0004 1553 | 21/43
33 h-m-p 0.0001 0.0005 191.3928 YCCCC 647.005979 4 0.0002 1606 | 21/43
34 h-m-p 0.0025 0.0161 16.8353 +YYYYC 644.427055 4 0.0096 1657 | 21/43
35 h-m-p 0.0023 0.0115 11.7145 +YYYYCCC 642.563454 6 0.0087 1712 | 21/43
36 h-m-p 0.0370 0.1851 2.4854 +YCYCCC 639.216206 5 0.1020 1767 | 21/43
37 h-m-p 0.0023 0.0116 20.5784 +YYYCCC 636.689806 5 0.0085 1821 | 21/43
38 h-m-p 0.0084 0.0420 4.0564 YCYCCC 636.285356 5 0.0214 1875 | 21/43
39 h-m-p 0.0120 0.0599 3.4262 YCCCC 635.943996 4 0.0277 1928 | 21/43
40 h-m-p 0.0644 1.3171 1.4754 +YCCC 635.554681 3 0.1566 1980 | 21/43
41 h-m-p 0.1064 0.5319 1.2256 YCCC 634.803112 3 0.1915 2031 | 21/43
42 h-m-p 0.1226 0.6128 0.3498 CYCCC 634.512339 4 0.2118 2084 | 21/43
43 h-m-p 0.0554 0.2768 0.6163 CCCC 634.423005 3 0.0620 2158 | 21/43
44 h-m-p 0.1005 0.5027 0.3624 +YCCC 634.253861 3 0.2824 2232 | 21/43
45 h-m-p 0.0378 0.1892 0.7515 ++ 634.061928 m 0.1892 2300 | 21/43
46 h-m-p -0.0000 -0.0000 0.5339
h-m-p: -1.42567174e-18 -7.12835871e-18 5.33894713e-01 634.061928
.. | 21/43
47 h-m-p 0.0000 0.0012 68.0874 +YCCC 633.920619 3 0.0001 2439 | 21/43
48 h-m-p 0.0001 0.0003 16.6975 +YC 633.897303 1 0.0002 2487 | 21/43
49 h-m-p 0.0000 0.0000 7.9974 ++ 633.896476 m 0.0000 2533 | 22/43
50 h-m-p 0.0000 0.0195 8.6909 +YC 633.891825 1 0.0003 2581 | 22/43
51 h-m-p 0.0002 0.0047 10.8808 CC 633.886192 1 0.0003 2629 | 22/43
52 h-m-p 0.0003 0.0145 9.1670 +YC 633.873215 1 0.0010 2677 | 22/43
53 h-m-p 0.0006 0.0093 13.9796 YC 633.867235 1 0.0003 2724 | 22/43
54 h-m-p 0.0011 0.0103 4.0782 YC 633.866431 1 0.0002 2771 | 22/43
55 h-m-p 0.0003 0.0285 2.9923 CC 633.865948 1 0.0002 2819 | 22/43
56 h-m-p 0.0006 0.0676 1.1307 CC 633.865575 1 0.0007 2867 | 22/43
57 h-m-p 0.0002 0.0286 5.1429 +YC 633.864465 1 0.0005 2915 | 22/43
58 h-m-p 0.0003 0.0253 9.7474 +CC 633.858719 1 0.0013 2964 | 22/43
59 h-m-p 0.0004 0.0056 36.6933 YC 633.855243 1 0.0002 3011 | 22/43
60 h-m-p 0.0005 0.0121 15.8042 YC 633.853903 1 0.0002 3058 | 22/43
61 h-m-p 0.0008 0.0668 4.2573 +YC 633.850921 1 0.0021 3106 | 22/43
62 h-m-p 0.0001 0.0165 71.0173 ++CCC 633.811260 2 0.0017 3158 | 22/43
63 h-m-p 0.0002 0.0091 563.2148 +YCCC 633.548403 3 0.0015 3210 | 22/43
64 h-m-p 0.0006 0.0030 137.0808 CC 633.539551 1 0.0002 3258 | 22/43
65 h-m-p 0.0018 0.0099 14.3928 -C 633.538971 0 0.0001 3305 | 21/43
66 h-m-p 0.0001 0.0097 23.8580 CYC 633.519998 2 0.0001 3354 | 21/43
67 h-m-p 0.0027 1.3556 1.8954 ++++CCC 633.119700 2 0.7798 3408 | 21/43
68 h-m-p 0.2160 1.0799 0.5229 ++ 633.006098 m 1.0799 3454 | 22/43
69 h-m-p 0.9916 8.0000 0.5695 CYC 632.954138 2 1.0832 3525 | 22/43
70 h-m-p 1.3190 8.0000 0.4677 YCC 632.938521 2 0.9064 3595 | 22/43
71 h-m-p 1.6000 8.0000 0.1877 CC 632.927098 1 1.4486 3664 | 22/43
72 h-m-p 1.6000 8.0000 0.1049 CC 632.925451 1 1.2934 3733 | 22/43
73 h-m-p 1.6000 8.0000 0.0249 YC 632.924729 1 3.0378 3801 | 22/43
74 h-m-p 1.2812 8.0000 0.0591 ++ 632.918849 m 8.0000 3868 | 22/43
75 h-m-p 0.7317 8.0000 0.6463 +CYC 632.911710 2 2.4629 3939 | 22/43
76 h-m-p 1.6000 8.0000 0.2578 CY 632.909540 1 1.7981 4008 | 22/43
77 h-m-p 1.5239 8.0000 0.3042 +YC 632.908675 1 4.1286 4077 | 22/43
78 h-m-p 1.6000 8.0000 0.3248 CC 632.908345 1 1.9039 4146 | 22/43
79 h-m-p 1.6000 8.0000 0.3383 YC 632.908200 1 3.5146 4214 | 22/43
80 h-m-p 1.6000 8.0000 0.3226 C 632.908151 0 2.1068 4281 | 22/43
81 h-m-p 1.6000 8.0000 0.3337 Y 632.908129 0 3.0675 4348 | 22/43
82 h-m-p 1.6000 8.0000 0.3361 C 632.908120 0 2.1765 4415 | 22/43
83 h-m-p 1.6000 8.0000 0.3498 Y 632.908116 0 2.9683 4482 | 22/43
84 h-m-p 1.6000 8.0000 0.3416 C 632.908115 0 2.1234 4549 | 22/43
85 h-m-p 1.6000 8.0000 0.3492 Y 632.908114 0 3.0597 4616 | 22/43
86 h-m-p 1.6000 8.0000 0.3448 C 632.908114 0 2.0874 4683 | 22/43
87 h-m-p 1.6000 8.0000 0.3482 Y 632.908114 0 3.1297 4750 | 22/43
88 h-m-p 1.6000 8.0000 0.3448 C 632.908114 0 2.1113 4817 | 22/43
89 h-m-p 1.6000 8.0000 0.3306 Y 632.908114 0 2.8778 4884 | 22/43
90 h-m-p 1.6000 8.0000 0.3498 C 632.908114 0 2.5051 4951 | 22/43
91 h-m-p 1.6000 8.0000 0.2985 C 632.908114 0 2.0384 5018 | 22/43
92 h-m-p 1.6000 8.0000 0.3063 +Y 632.908114 0 4.2897 5086 | 22/43
93 h-m-p 1.6000 8.0000 0.3105 C 632.908114 0 0.4430 5153 | 22/43
94 h-m-p 0.5253 8.0000 0.2619 Y 632.908114 0 0.3885 5220 | 22/43
95 h-m-p 0.3627 8.0000 0.2805 C 632.908114 0 0.5238 5287 | 22/43
96 h-m-p 1.6000 8.0000 0.0147 ++ 632.908114 m 8.0000 5354 | 22/43
97 h-m-p 0.0390 8.0000 3.0133 C 632.908114 0 0.0114 5421 | 22/43
98 h-m-p 1.6000 8.0000 0.0009 ++ 632.908114 m 8.0000 5467 | 22/43
99 h-m-p 0.0368 8.0000 0.1886 -C 632.908114 0 0.0023 5535 | 22/43
100 h-m-p 0.4628 8.0000 0.0009 -Y 632.908114 0 0.0289 5603 | 22/43
101 h-m-p 0.0160 8.0000 0.0039 +Y 632.908114 0 0.0640 5671 | 22/43
102 h-m-p 0.0789 8.0000 0.0031 --Y 632.908114 0 0.0012 5740 | 22/43
103 h-m-p 0.0160 8.0000 0.0219 -------------.. | 22/43
104 h-m-p 0.0160 8.0000 0.0020 ------Y 632.908114 0 0.0000 5891 | 22/43
105 h-m-p 0.0160 8.0000 0.0005 -----Y 632.908114 0 0.0000 5963
Out..
lnL = -632.908114
5964 lfun, 23856 eigenQcodon, 679896 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -638.751566 S = -603.582704 -49.622931
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 65 patterns 5:23
did 20 / 65 patterns 5:23
did 30 / 65 patterns 5:23
did 40 / 65 patterns 5:24
did 50 / 65 patterns 5:24
did 60 / 65 patterns 5:24
did 65 / 65 patterns 5:24end of tree file.
Time used: 5:24
Model 7: beta
TREE # 1
(12, (((11, 13, 16, (18, 2), 4, 30, 3, 6, 5, 19, 25, 23, 24, 9, 29, 28), (17, (26, 10, 15))), 7), ((22, 27, 14), 21, 8, 1, 20)); MP score: 30
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
34
0.086706 0.090578 0.081548 0.037377 0.027355 0.018923 0.039104 0.105822 0.068180 0.032953 0.027908 0.087335 0.075181 0.082770 0.036548 0.020784 0.083050 0.075634 0.060727 0.056599 0.041817 0.087477 0.094005 0.044602 0.040358 0.104795 0.019612 0.017064 0.023938 0.020340 0.108027 0.027904 0.097994 0.081068 0.100001 0.083981 0.085327 0.061762 1.851470 0.397233 1.694171
ntime & nrate & np: 38 1 41
Bounds (np=41):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 11.032981
np = 41
lnL0 = -785.814211
Iterating by ming2
Initial: fx= 785.814211
x= 0.08671 0.09058 0.08155 0.03738 0.02736 0.01892 0.03910 0.10582 0.06818 0.03295 0.02791 0.08734 0.07518 0.08277 0.03655 0.02078 0.08305 0.07563 0.06073 0.05660 0.04182 0.08748 0.09400 0.04460 0.04036 0.10480 0.01961 0.01706 0.02394 0.02034 0.10803 0.02790 0.09799 0.08107 0.10000 0.08398 0.08533 0.06176 1.85147 0.39723 1.69417
1 h-m-p 0.0000 0.0002 450.6234 +++ 744.285429 m 0.0002 47 | 1/41
2 h-m-p 0.0000 0.0000 2074.0810 ++ 738.861278 m 0.0000 91 | 2/41
3 h-m-p 0.0000 0.0000 722.2363 ++ 736.881952 m 0.0000 135 | 3/41
4 h-m-p 0.0000 0.0000 731.1050 ++ 732.588103 m 0.0000 179 | 4/41
5 h-m-p 0.0000 0.0001 676.3034 ++ 723.657495 m 0.0001 223 | 5/41
6 h-m-p 0.0000 0.0000 750.2688 ++ 718.416988 m 0.0000 267 | 6/41
7 h-m-p 0.0000 0.0000 7000.5129 ++ 717.829352 m 0.0000 311 | 7/41
8 h-m-p 0.0000 0.0000 1782914.6919 ++ 717.488316 m 0.0000 355 | 8/41
9 h-m-p 0.0000 0.0000 2444.5078 ++ 708.021496 m 0.0000 399 | 9/41
10 h-m-p 0.0000 0.0000 7750.1859 ++ 704.676061 m 0.0000 443 | 10/41
11 h-m-p 0.0000 0.0000 3230.9506 ++ 701.381822 m 0.0000 487 | 11/41
12 h-m-p 0.0000 0.0000 11877.4523 ++ 698.265653 m 0.0000 531 | 12/41
13 h-m-p 0.0000 0.0000 26739.7777 ++ 682.792953 m 0.0000 575 | 13/41
14 h-m-p 0.0000 0.0000 13202.8607 ++ 667.160756 m 0.0000 619 | 14/41
15 h-m-p 0.0000 0.0000 4787.1452 ++ 666.022838 m 0.0000 663 | 15/41
16 h-m-p 0.0000 0.0000 2670.7977 ++ 665.729443 m 0.0000 707 | 16/41
17 h-m-p 0.0000 0.0000 2887.8186 ++ 661.575365 m 0.0000 751 | 17/41
18 h-m-p 0.0000 0.0000 1612.2084 ++ 661.363042 m 0.0000 795 | 18/41
19 h-m-p 0.0000 0.0000 1108.5608 ++ 660.087943 m 0.0000 839 | 19/41
20 h-m-p 0.0000 0.0000 909.2157 ++ 660.053717 m 0.0000 883 | 20/41
21 h-m-p 0.0000 0.0001 410.5799 ++ 657.503877 m 0.0001 927 | 21/41
22 h-m-p 0.0002 0.0015 63.6041 ++ 650.574300 m 0.0015 971 | 22/41
23 h-m-p 0.0000 0.0002 217.7087 +YYCYCC 649.042753 5 0.0002 1023 | 22/41
24 h-m-p 0.0000 0.0001 483.2420 YCYCCC 648.557952 5 0.0000 1075 | 22/41
25 h-m-p 0.0001 0.0011 169.6713 +CCCCC 644.522974 4 0.0008 1129 | 22/41
26 h-m-p 0.0002 0.0008 123.9273 YCYCCC 643.278682 5 0.0004 1181 | 22/41
27 h-m-p 0.0002 0.0012 78.2488 YCYCCC 642.415750 5 0.0006 1233 | 22/41
28 h-m-p 0.0004 0.0021 37.4371 CYCCC 641.824433 4 0.0008 1284 | 22/41
29 h-m-p 0.0011 0.0054 17.9548 CCCCC 641.097769 4 0.0018 1336 | 22/41
30 h-m-p 0.0003 0.0017 23.7764 YCYCCC 640.727940 5 0.0008 1388 | 22/41
31 h-m-p 0.0010 0.0052 12.6494 YCYCCC 639.841248 5 0.0024 1440 | 22/41
32 h-m-p 0.0029 0.0184 10.6314 YCCCC 638.582719 4 0.0066 1491 | 22/41
33 h-m-p 0.0092 0.0459 3.6780 CCCC 638.185190 3 0.0111 1541 | 21/41
34 h-m-p 0.0011 0.0056 26.6467 -YCC 638.171097 2 0.0001 1589 | 21/41
35 h-m-p 0.0011 0.0295 2.9293 +CCC 637.986210 2 0.0057 1638 | 21/41
36 h-m-p 0.0044 0.0257 3.7558 +YYCCC 637.346636 4 0.0140 1689 | 21/41
37 h-m-p 0.0257 0.1601 2.0543 ++ 636.251325 m 0.1601 1733 | 21/41
38 h-m-p 0.0000 0.0000 1.9665
h-m-p: 1.91512743e-18 9.57563717e-18 1.96645095e+00 636.251325
.. | 21/41
39 h-m-p 0.0000 0.0006 98.8269 +YCCC 635.947598 3 0.0001 1824 | 21/41
40 h-m-p 0.0000 0.0000 32.9142 ++ 635.942187 m 0.0000 1868 | 22/41
41 h-m-p 0.0000 0.0040 15.6755 ++YCC 635.929946 2 0.0001 1917 | 22/41
42 h-m-p 0.0003 0.0059 6.6120 CC 635.924898 1 0.0003 1963 | 22/41
43 h-m-p 0.0004 0.0098 4.8288 YC 635.922817 1 0.0002 2008 | 22/41
44 h-m-p 0.0003 0.0219 3.8242 YC 635.919234 1 0.0007 2053 | 22/41
45 h-m-p 0.0002 0.0080 16.6629 +YCC 635.907501 2 0.0006 2101 | 22/41
46 h-m-p 0.0004 0.0039 23.8225 YC 635.900586 1 0.0002 2146 | 22/41
47 h-m-p 0.0005 0.0136 11.2141 YC 635.897765 1 0.0003 2191 | 22/41
48 h-m-p 0.0005 0.0176 5.5432 CC 635.894184 1 0.0008 2237 | 22/41
49 h-m-p 0.0001 0.0149 30.7522 +CC 635.882125 1 0.0005 2284 | 22/41
50 h-m-p 0.0005 0.0047 31.6130 YC 635.877097 1 0.0002 2329 | 22/41
51 h-m-p 0.0006 0.0105 11.1328 YC 635.874933 1 0.0003 2374 | 22/41
52 h-m-p 0.0007 0.0241 4.2300 YC 635.874023 1 0.0003 2419 | 22/41
53 h-m-p 0.0005 0.0229 2.6851 CC 635.873798 1 0.0002 2465 | 22/41
54 h-m-p 0.0004 0.1828 1.6671 ++CY 635.869451 1 0.0063 2513 | 22/41
55 h-m-p 0.0001 0.0082 86.0959 ++YCC 635.823919 2 0.0013 2562 | 22/41
56 h-m-p 0.0002 0.0016 692.6565 +YYCYYYCC 635.324902 7 0.0011 2617 | 22/41
57 h-m-p 0.0038 0.0190 4.0997 -YC 635.324251 1 0.0004 2663 | 22/41
58 h-m-p 0.0005 0.1033 3.2899 +++YCYCCYCYC 635.079147 8 0.0939 2724 | 21/41
59 h-m-p 0.0001 0.0003 111.3760 -YC 635.078835 1 0.0000 2770 | 21/41
60 h-m-p 0.0015 0.0855 0.5185 ++CY 635.072918 1 0.0239 2818 | 21/41
61 h-m-p 0.0380 3.5996 0.3265 +YC 635.031243 1 0.3029 2884 | 21/41
62 h-m-p 0.0619 0.3095 0.2953 +CCC 635.003072 2 0.2255 2953 | 21/41
63 h-m-p 0.8502 8.0000 0.0783 YC 634.998714 1 0.5635 3018 | 21/41
64 h-m-p 1.6000 8.0000 0.0029 YC 634.998304 1 1.0685 3083 | 21/41
65 h-m-p 1.6000 8.0000 0.0008 C 634.998277 0 1.2988 3147 | 21/41
66 h-m-p 1.6000 8.0000 0.0005 Y 634.998258 0 3.0330 3211 | 21/41
67 h-m-p 1.6000 8.0000 0.0003 Y 634.998256 0 0.7326 3275 | 21/41
68 h-m-p 1.6000 8.0000 0.0001 C 634.998254 0 2.0847 3339 | 21/41
69 h-m-p 1.6000 8.0000 0.0001 C 634.998254 0 0.5270 3403 | 21/41
70 h-m-p 1.2031 8.0000 0.0000 C 634.998254 0 0.9927 3467 | 21/41
71 h-m-p 1.6000 8.0000 0.0000 ++ 634.998253 m 8.0000 3531 | 21/41
72 h-m-p 1.3326 8.0000 0.0001 ----------C 634.998253 0 0.0000 3605
Out..
lnL = -634.998253
3606 lfun, 39666 eigenQcodon, 1370280 P(t)
end of tree file.
Time used: 13:45
Model 8: beta&w>1
TREE # 1
(12, (((11, 13, 16, (18, 2), 4, 30, 3, 6, 5, 19, 25, 23, 24, 9, 29, 28), (17, (26, 10, 15))), 7), ((22, 27, 14), 21, 8, 1, 20)); MP score: 30
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
34
0.078905 0.012781 0.017807 0.018881 0.107459 0.105370 0.038787 0.090774 0.106056 0.072956 0.042820 0.026260 0.058841 0.021889 0.086266 0.055066 0.056140 0.060047 0.100853 0.044005 0.083096 0.066752 0.106090 0.079146 0.032043 0.102433 0.044644 0.027575 0.105797 0.031470 0.095340 0.089686 0.054050 0.106661 0.093499 0.027932 0.060058 0.038749 1.635796 0.900000 0.732746 1.229822 1.300000
ntime & nrate & np: 38 2 43
Bounds (np=43):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 7.728565
np = 43
lnL0 = -787.255192
Iterating by ming2
Initial: fx= 787.255192
x= 0.07891 0.01278 0.01781 0.01888 0.10746 0.10537 0.03879 0.09077 0.10606 0.07296 0.04282 0.02626 0.05884 0.02189 0.08627 0.05507 0.05614 0.06005 0.10085 0.04400 0.08310 0.06675 0.10609 0.07915 0.03204 0.10243 0.04464 0.02758 0.10580 0.03147 0.09534 0.08969 0.05405 0.10666 0.09350 0.02793 0.06006 0.03875 1.63580 0.90000 0.73275 1.22982 1.30000
1 h-m-p 0.0000 0.0002 378.9976 +++ 752.352212 m 0.0002 49 | 1/43
2 h-m-p 0.0000 0.0000 227817.8295 ++ 735.044340 m 0.0000 95 | 2/43
3 h-m-p 0.0000 0.0000 46313.0720 ++ 732.772398 m 0.0000 141 | 3/43
4 h-m-p 0.0000 0.0000 273459.8803 ++ 712.302670 m 0.0000 187 | 4/43
5 h-m-p 0.0000 0.0000 9951.0398 ++ 705.435200 m 0.0000 233 | 5/43
6 h-m-p 0.0000 0.0000 7012.9635 ++ 703.501815 m 0.0000 279 | 6/43
7 h-m-p 0.0000 0.0000 5520.6739 ++ 702.765770 m 0.0000 325 | 7/43
8 h-m-p 0.0000 0.0000 5126.0822 ++ 687.368024 m 0.0000 371 | 8/43
9 h-m-p 0.0000 0.0000 4154.8516 ++ 685.849789 m 0.0000 417 | 9/43
10 h-m-p 0.0000 0.0000 1891.5716 ++ 682.380736 m 0.0000 463 | 10/43
11 h-m-p 0.0000 0.0000 1822.8748 ++ 680.882040 m 0.0000 509 | 11/43
12 h-m-p 0.0000 0.0000 7566.6939 ++ 680.627863 m 0.0000 555 | 12/43
13 h-m-p 0.0000 0.0000 7493.3211 ++ 674.006984 m 0.0000 601 | 13/43
14 h-m-p 0.0000 0.0000 2348.5657 ++ 667.539414 m 0.0000 647 | 14/43
15 h-m-p 0.0000 0.0000 2732.2533 ++ 659.713540 m 0.0000 693 | 15/43
16 h-m-p 0.0000 0.0000 1822.7306 ++ 657.287324 m 0.0000 739 | 16/43
17 h-m-p 0.0000 0.0000 2124.2596 ++ 654.957518 m 0.0000 785 | 17/43
18 h-m-p 0.0000 0.0000 1430.1829 ++ 648.104568 m 0.0000 831 | 18/43
19 h-m-p 0.0000 0.0000 1391.2773 ++ 648.060144 m 0.0000 877 | 19/43
20 h-m-p 0.0000 0.0000 701.4235 ++ 646.953235 m 0.0000 923 | 19/43
21 h-m-p 0.0000 0.0000 103098.8123 ++ 646.571921 m 0.0000 969 | 20/43
22 h-m-p 0.0000 0.0000 587.9052 ++ 646.477831 m 0.0000 1015 | 21/43
23 h-m-p 0.0000 0.0002 55.1505 +++ 645.591200 m 0.0002 1062 | 21/43
24 h-m-p 0.0004 0.0042 23.1728 +YYCYCCCC 643.081438 7 0.0023 1120 | 21/43
25 h-m-p 0.0002 0.0009 60.5418 YCYCCC 641.986166 5 0.0004 1174 | 21/43
26 h-m-p 0.0010 0.0049 16.5961 CCCC 641.594907 3 0.0012 1226 | 21/43
27 h-m-p 0.0007 0.0033 17.3424 +YCYCCC 640.716267 5 0.0018 1281 | 21/43
28 h-m-p 0.0003 0.0016 38.1395 YCCCC 640.385064 4 0.0006 1334 | 21/43
29 h-m-p 0.0005 0.0027 27.6729 CYCCC 640.173653 4 0.0008 1387 | 21/43
30 h-m-p 0.0022 0.0108 10.0674 YCCCC 639.790196 4 0.0040 1440 | 21/43
31 h-m-p 0.0026 0.0130 14.4984 YCYCCC 638.931998 5 0.0070 1494 | 21/43
32 h-m-p 0.0041 0.0206 11.8667 +YYCCC 638.018513 4 0.0139 1547 | 21/43
33 h-m-p 0.0062 0.0309 4.5401 YCCC 637.820372 3 0.0126 1598 | 21/43
34 h-m-p 0.0117 0.0761 4.9129 +YCCC 637.210286 3 0.0359 1650 | 21/43
35 h-m-p 0.0333 0.1663 1.4396 +YCYCCC 636.128291 5 0.0912 1705 | 21/43
36 h-m-p 0.0131 0.0653 2.7285 YCCCC 635.664824 4 0.0315 1758 | 21/43
37 h-m-p 0.0358 0.3309 2.4001 +YYC 635.152119 2 0.1289 1807 | 21/43
38 h-m-p 0.0882 0.5361 3.5084 CYCCC 634.861072 4 0.0637 1860 | 21/43
39 h-m-p 0.1430 0.7149 0.8272 CYCCC 634.538086 4 0.2594 1913 | 21/43
40 h-m-p 0.0744 0.3721 1.6634 YCC 634.435804 2 0.0465 1984 | 21/43
41 h-m-p 0.0979 0.4894 0.4564 +YC 634.311692 1 0.2685 2032 | 21/43
42 h-m-p 0.0287 0.1433 0.9935 ++ 634.156182 m 0.1433 2100 | 21/43
43 h-m-p 0.0000 0.0000 0.5598
h-m-p: 4.03765157e-18 2.01882579e-17 5.59785675e-01 634.156182
.. | 21/43
44 h-m-p 0.0000 0.0013 46.2298 +YCCC 634.070867 3 0.0001 2239 | 21/43
45 h-m-p 0.0002 0.0013 14.1904 YCC 634.056083 2 0.0002 2288 | 21/43
46 h-m-p 0.0003 0.0062 8.3905 YC 634.051681 1 0.0002 2335 | 21/43
47 h-m-p 0.0002 0.0058 5.5923 YC 634.046969 1 0.0005 2382 | 21/43
48 h-m-p 0.0005 0.0158 5.5995 CC 634.043094 1 0.0005 2430 | 21/43
49 h-m-p 0.0003 0.0128 10.2067 CC 634.040020 1 0.0003 2478 | 21/43
50 h-m-p 0.0003 0.0126 8.6284 C 634.037215 0 0.0003 2524 | 21/43
51 h-m-p 0.0009 0.0284 3.1850 YC 634.036254 1 0.0004 2571 | 21/43
52 h-m-p 0.0004 0.0114 2.9182 C 634.035552 0 0.0004 2617 | 21/43
53 h-m-p 0.0002 0.0033 6.3413 +YC 634.033738 1 0.0005 2665 | 21/43
54 h-m-p 0.0003 0.0193 11.9827 +CCC 634.023646 2 0.0016 2716 | 21/43
55 h-m-p 0.0004 0.0033 55.6796 YCC 634.017514 2 0.0002 2765 | 21/43
56 h-m-p 0.0003 0.0015 28.3947 CC 634.013606 1 0.0003 2813 | 21/43
57 h-m-p 0.0060 0.0419 1.3242 -CC 634.013468 1 0.0003 2862 | 21/43
58 h-m-p 0.0002 0.0443 1.8438 +YC 634.013170 1 0.0006 2910 | 21/43
59 h-m-p 0.0004 0.1955 6.9741 ++++YYCCC 633.827993 4 0.0812 2966 | 21/43
60 h-m-p 0.0002 0.0009 821.8522 YYC 633.796299 2 0.0001 3014 | 21/43
61 h-m-p 0.0004 0.0021 89.4540 CC 633.792094 1 0.0002 3062 | 21/43
62 h-m-p 0.0144 0.0950 1.0577 -YC 633.791585 1 0.0015 3110 | 21/43
63 h-m-p 0.0002 0.0395 6.7537 ++YCC 633.784610 2 0.0029 3161 | 21/43
64 h-m-p 0.0001 0.0284 200.5480 ++YCCC 633.537861 3 0.0037 3214 | 21/43
65 h-m-p 0.6094 3.0469 1.0280 CYCCC 633.309762 4 1.0766 3267 | 21/43
66 h-m-p 0.3238 1.6189 0.6030 ++ 633.192419 m 1.6189 3313 | 22/43
67 h-m-p 1.4817 8.0000 0.6588 CCC 633.153526 2 0.4415 3385 | 21/43
68 h-m-p 0.0074 0.1629 39.0864 --CC 633.153308 1 0.0001 3456 | 21/43
69 h-m-p 0.0065 0.7408 0.5733 ++++ 633.131226 m 0.7408 3504 | 22/43
70 h-m-p 0.8214 8.0000 0.5171 CCC 633.119024 2 1.1046 3576 | 22/43
71 h-m-p 1.6000 8.0000 0.0900 CC 633.113927 1 1.3607 3645 | 21/43
72 h-m-p 0.0007 0.0161 169.5492 YC 633.113568 1 0.0001 3713 | 21/43
73 h-m-p 0.2327 1.4035 0.0980 ++ 633.103928 m 1.4035 3759 | 22/43
74 h-m-p 0.2632 8.0000 0.5227 +YCCC 633.073488 3 2.1528 3833 | 22/43
75 h-m-p 1.6000 8.0000 0.6524 CYC 633.049675 2 1.4086 3903 | 21/43
76 h-m-p 0.0045 0.0303 204.6170 -YC 633.049621 1 0.0001 3972 | 21/43
77 h-m-p 0.0494 0.3699 0.5975 ++ 633.043812 m 0.3699 4018 | 22/43
78 h-m-p 0.1020 8.0000 2.1654 ++YC 633.018823 1 1.0820 4089 | 22/43
79 h-m-p 1.3645 8.0000 1.7171 CC 633.001838 1 1.4453 4137 | 22/43
80 h-m-p 1.6000 8.0000 1.4910 YCCC 632.980497 3 3.4893 4188 | 22/43
81 h-m-p 1.6000 8.0000 2.1765 YC 632.968289 1 2.8033 4235 | 22/43
82 h-m-p 1.6000 8.0000 3.3215 YCC 632.958852 2 2.7799 4284 | 22/43
83 h-m-p 1.6000 8.0000 4.6632 YC 632.951289 1 3.2198 4331 | 22/43
84 h-m-p 1.6000 8.0000 6.8543 YCC 632.946369 2 2.9484 4380 | 22/43
85 h-m-p 0.7377 3.6886 9.8785 ++ 632.942629 m 3.6886 4426 | 23/43
86 h-m-p 0.4796 3.8925 18.8803 ----------------.. | 23/43
87 h-m-p 0.0000 0.0065 2.2446 +YC 632.942328 1 0.0001 4534 | 23/43
88 h-m-p 0.0003 0.1162 0.7852 YC 632.942279 1 0.0002 4581 | 23/43
89 h-m-p 0.0010 0.4786 0.2233 C 632.942273 0 0.0003 4647 | 23/43
90 h-m-p 0.0007 0.2881 0.0793 C 632.942272 0 0.0002 4713 | 23/43
91 h-m-p 0.0029 1.4286 0.0792 C 632.942271 0 0.0006 4779 | 23/43
92 h-m-p 0.0029 1.4308 0.1256 C 632.942269 0 0.0008 4845 | 23/43
93 h-m-p 0.0006 0.2864 0.5426 C 632.942264 0 0.0005 4911 | 23/43
94 h-m-p 0.0009 0.4665 1.0118 C 632.942240 0 0.0014 4977 | 23/43
95 h-m-p 0.0002 0.1184 7.0430 YC 632.942176 1 0.0005 5024 | 23/43
96 h-m-p 0.0002 0.1234 15.9434 YC 632.942011 1 0.0006 5071 | 23/43
97 h-m-p 0.0006 0.0826 14.5293 YC 632.941889 1 0.0005 5118 | 23/43
98 h-m-p 0.0005 0.0426 13.8435 C 632.941855 0 0.0001 5164 | 23/43
99 h-m-p 0.0064 0.5248 0.2960 --Y 632.941854 0 0.0002 5212 | 23/43
100 h-m-p 0.0012 0.6216 0.0484 -Y 632.941854 0 0.0001 5279 | 23/43
101 h-m-p 0.0160 8.0000 0.0298 +Y 632.941843 0 0.0455 5346 | 23/43
102 h-m-p 0.0005 0.2524 7.4768 +YC 632.941640 1 0.0034 5414 | 23/43
103 h-m-p 0.0002 0.1037 247.9460 ++YC 632.927180 1 0.0070 5463 | 23/43
104 h-m-p 0.0033 0.0163 324.5570 -C 632.926653 0 0.0002 5510 | 23/43
105 h-m-p 0.0128 0.0639 3.0638 ---Y 632.926651 0 0.0001 5559 | 23/43
106 h-m-p 0.0160 8.0000 0.0950 +++YC 632.925124 1 2.4096 5609 | 23/43
107 h-m-p 1.6000 8.0000 0.0977 ++ 632.916465 m 8.0000 5675 | 23/43
108 h-m-p 1.4135 8.0000 0.5529 YC 632.915114 1 0.9217 5742 | 23/43
109 h-m-p 1.6000 8.0000 0.0119 Y 632.915103 0 1.0486 5808 | 23/43
110 h-m-p 1.6000 8.0000 0.0024 Y 632.915102 0 0.9250 5874 | 23/43
111 h-m-p 1.6000 8.0000 0.0001 Y 632.915102 0 0.6577 5940 | 23/43
112 h-m-p 1.6000 8.0000 0.0000 --C 632.915102 0 0.0250 6008
Out..
lnL = -632.915102
6009 lfun, 72108 eigenQcodon, 2511762 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -638.078054 S = -603.581257 -65.826301
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 65 patterns 26:39
did 20 / 65 patterns 26:39
did 30 / 65 patterns 26:39
did 40 / 65 patterns 26:39
did 50 / 65 patterns 26:40
did 60 / 65 patterns 26:40
did 65 / 65 patterns 26:40end of tree file.
Time used: 26:40
The loglikelihoods for models M1, M2, M7 and M8 are -634.901618 -632.908114 -634.998253 -632.915102 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
PEDV_10F_L_VIPR_ALG4_761662529_293_622_1_2012_01_China_Swine_PEDV MASNQVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
USA_Texas424_2014_L_VIPR_ALG4_825144587_248_577_1_2014_10_14_USA_Swine_PEDV MASNHVTLAFANDAEISALGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
USA_Texas435_2014_L_VIPR_ALG4_825144895_248_577_1_2014_11_18_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
USA_Minnesota312_2014_L_VIPR_ALG4_825144699_248_577_1_2014_04_07_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
NW17_L_VIPR_ALG4_ATY72305_1_293_622_1_2015_China_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
PEDV_MEX_JAL_02_2017_L_VIPR_ALG4_AVU05373_1_123_452_1_2017_02_10_Mexico_Swine_PEDV MASNHVTLAIANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
GDS08_L_VIPR_ALG4_QCQ19935_1_293_622_1_2011_02_10_China_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
CH_SCCD_2014_L_VIPR_ALG4_1009284165_293_622_1_2014_11_China_Swine_PEDV MASNQVTLALANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
USA_Minnesota62_2013_L_VIPR_ALG4_658130400_258_587_1_2013_11_18_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
PEDV_JS_A_L_VIPR_ALG4_AZS18877_1_293_622_1_2017_11_10_China_Swine_PEDV MASNHVTLAVANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLVDTVEGLLPED
USA_SouthDakota285_2014_L_VIPR_ALG4_825144566_248_577_1_2014_04_02_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
CH_SCZJ_2018_L_VIPR_ALG4_AZL47227_1_293_622_1_2018_02_06_China_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
PC177_L_VIPR_ALG4_893707341_282_611_1_2013_12_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
CH_SCZY44_2017_L_VIPR_ALG4_AZL47203_1_293_622_1_2017_09_09_China_Swine_PEDV MASNQVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
GD_XL_2019_L_VIPR_ALG4_QLH02027_1_293_622_1_2019_03_18_China_Swine_PEDV MASNHVTLAVANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLVDTVEGLLPED
COL_Cundinamarca03715_2014_L_VIPR_ALG4_QGQ60239_1_281_610_1_2014_03_16_Colombia_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
IBT_VN_L_VIPR_ALG4_QPX15727_1_293_622_1_2018_02_02_Viet_Nam_Swine_PEDV MASNHVTLAAANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLVDIVEGLLPED
USA_OK10240_6_2017_L_VIPR_ALG4_AVI57395_1_293_622_1_2017_02_07_USA_Swine_PEDV MASNHVTLAFANDAEISALGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
PEDV_1456_Zaragoza_Egea_de_los_Caballeros_L_VIPR_ALG4_QKV43732_1_258_587_1_2014_04_29_Spain_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
GDS20_L_VIPR_ALG4_QCQ19803_1_293_622_1_2012_06_22_China_Swine_PEDV MASNQVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
CH_YNKM_8_2013_L_VIPR_ALG4_575502657_293_622_1_2013_09_20_China_Unknown_PEDV MASNQVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
JSCZ1601_L_VIPR_ALG4_1126499706_294_623_1_2016_China_Swine_PEDV MASNQVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
PEDV_LY_L_VIPR_ALG4_761662557_293_622_1_2014_01_China_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
USA_Missouri270_2014_L_VIPR_ALG4_825144965_248_577_1_2014_02_18_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVAGLLPED
USA_Illinois87_2013_L_VIPR_ALG4_658130554_258_587_1_2013_12_04_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
PEDV_7C_L_VIPR_ALG4_761662515_293_622_1_2011_06_China_Swine_PEDV MASNHVTLAVANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLVDTVEGLLPED
ZJU_G2_2013_L_VIPR_ALG4_ANY27030_1_293_622_1_2013_11_14_China_Swine_PEDV MASNQVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPDD
USA_NorthCarolina66_2013_L_VIPR_ALG4_658130428_258_587_1_2013_11_23_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
PEDV_ROMANIA_L01330_K25_15_02_2015_L_VIPR_ALG4_SNQ28044_1_293_622_1_NA_NA_Unknown_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
KGS_4_JPN_2014_L_VIPR_ALG4_948549235_235_564_1_2014_04_Japan_Pig_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPED
****:**** ********:******************************.* * ****:*
PEDV_10F_L_VIPR_ALG4_761662529_293_622_1_2012_01_China_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG
USA_Texas424_2014_L_VIPR_ALG4_825144587_248_577_1_2014_10_14_USA_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
USA_Texas435_2014_L_VIPR_ALG4_825144895_248_577_1_2014_11_18_USA_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
USA_Minnesota312_2014_L_VIPR_ALG4_825144699_248_577_1_2014_04_07_USA_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
NW17_L_VIPR_ALG4_ATY72305_1_293_622_1_2015_China_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
PEDV_MEX_JAL_02_2017_L_VIPR_ALG4_AVU05373_1_123_452_1_2017_02_10_Mexico_Swine_PEDV YVMVVVGTTKPSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
GDS08_L_VIPR_ALG4_QCQ19935_1_293_622_1_2011_02_10_China_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG
CH_SCCD_2014_L_VIPR_ALG4_1009284165_293_622_1_2014_11_China_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG
USA_Minnesota62_2013_L_VIPR_ALG4_658130400_258_587_1_2013_11_18_USA_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
PEDV_JS_A_L_VIPR_ALG4_AZS18877_1_293_622_1_2017_11_10_China_Swine_PEDV YVMVVVCTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG
USA_SouthDakota285_2014_L_VIPR_ALG4_825144566_248_577_1_2014_04_02_USA_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
CH_SCZJ_2018_L_VIPR_ALG4_AZL47227_1_293_622_1_2018_02_06_China_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPINICGWLLFSNCNYFLEELELTFGRRGG
PC177_L_VIPR_ALG4_893707341_282_611_1_2013_12_USA_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
CH_SCZY44_2017_L_VIPR_ALG4_AZL47203_1_293_622_1_2017_09_09_China_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG
GD_XL_2019_L_VIPR_ALG4_QLH02027_1_293_622_1_2019_03_18_China_Swine_PEDV YVMVVVCTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG
COL_Cundinamarca03715_2014_L_VIPR_ALG4_QGQ60239_1_281_610_1_2014_03_16_Colombia_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
IBT_VN_L_VIPR_ALG4_QPX15727_1_293_622_1_2018_02_02_Viet_Nam_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG
USA_OK10240_6_2017_L_VIPR_ALG4_AVI57395_1_293_622_1_2017_02_07_USA_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
PEDV_1456_Zaragoza_Egea_de_los_Caballeros_L_VIPR_ALG4_QKV43732_1_258_587_1_2014_04_29_Spain_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
GDS20_L_VIPR_ALG4_QCQ19803_1_293_622_1_2012_06_22_China_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEDLELTFGRRGG
CH_YNKM_8_2013_L_VIPR_ALG4_575502657_293_622_1_2013_09_20_China_Unknown_PEDV YVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG
JSCZ1601_L_VIPR_ALG4_1126499706_294_623_1_2016_China_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG
PEDV_LY_L_VIPR_ALG4_761662557_293_622_1_2014_01_China_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
USA_Missouri270_2014_L_VIPR_ALG4_825144965_248_577_1_2014_02_18_USA_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
USA_Illinois87_2013_L_VIPR_ALG4_658130554_258_587_1_2013_12_04_USA_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
PEDV_7C_L_VIPR_ALG4_761662515_293_622_1_2011_06_China_Swine_PEDV YVMVVVCTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG
ZJU_G2_2013_L_VIPR_ALG4_ANY27030_1_293_622_1_2013_11_14_China_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG
USA_NorthCarolina66_2013_L_VIPR_ALG4_658130428_258_587_1_2013_11_23_USA_Swine_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
PEDV_ROMANIA_L01330_K25_15_02_2015_L_VIPR_ALG4_SNQ28044_1_293_622_1_NA_NA_Unknown_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
KGS_4_JPN_2014_L_VIPR_ALG4_948549235_235_564_1_2014_04_Japan_Pig_PEDV YVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
****** *** *********** ****************:**********
>PEDV_10F_L_VIPR_ALG4_761662529_293_622_1_2012_01_China_Swine_PEDV ATGGCTAGCAACCAAGTCACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAGAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTCACTTTTGGTCGTCGTGGTGGT >USA_Texas424_2014_L_VIPR_ALG4_825144587_248_577_1_2014_10_14_USA_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTCTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTTGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >USA_Texas435_2014_L_VIPR_ALG4_825144895_248_577_1_2014_11_18_USA_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >USA_Minnesota312_2014_L_VIPR_ALG4_825144699_248_577_1_2014_04_07_USA_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >NW17_L_VIPR_ALG4_ATY72305_1_293_622_1_2015_China_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >PEDV_MEX_JAL_02_2017_L_VIPR_ALG4_AVU05373_1_123_452_1_2017_02_10_Mexico_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTATTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCCTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >GDS08_L_VIPR_ALG4_QCQ19935_1_293_622_1_2011_02_10_China_Swine_PEDV ATGGCTAGCAACCATGTCACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAGAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTCACTTTTGGTCGTCGTGGTGGT >CH_SCCD_2014_L_VIPR_ALG4_1009284165_293_622_1_2014_11_China_Swine_PEDV ATGGCTAGCAACCAAGTCACATTGGCTTTAGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAGAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTCACTTTTGGTCGTCGTGGTGGT >USA_Minnesota62_2013_L_VIPR_ALG4_658130400_258_587_1_2013_11_18_USA_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >PEDV_JS_A_L_VIPR_ALG4_AZS18877_1_293_622_1_2017_11_10_China_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTGTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGTTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTTGTGGTCTGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAGAAACATCTGTGGTTGGCTATTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTCACTTTTGGTCGTCGTGGTGGT >USA_SouthDakota285_2014_L_VIPR_ALG4_825144566_248_577_1_2014_04_02_USA_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >CH_SCZJ_2018_L_VIPR_ALG4_AZL47227_1_293_622_1_2018_02_06_China_Swine_PEDV ATGGCTAGCAACCACGTCACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCATAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTCACTTTTGGTCGTCGTGGTGGT >PC177_L_VIPR_ALG4_893707341_282_611_1_2013_12_USA_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >CH_SCZY44_2017_L_VIPR_ALG4_AZL47203_1_293_622_1_2017_09_09_China_Swine_PEDV ATGGCTAGCAACCAAGTCACATTGGCATTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTTGTGGTAGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAGAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTCACCTTTGGTCGTCGTGGCGGT >GD_XL_2019_L_VIPR_ALG4_QLH02027_1_293_622_1_2019_03_18_China_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTGTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGTTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTTGTGGTCTGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAGAAACATCTGTGGTTGGCTATTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTCACTTTTGGTCGTCGTGGTGGT >COL_Cundinamarca03715_2014_L_VIPR_ALG4_QGQ60239_1_281_610_1_2014_03_16_Colombia_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >IBT_VN_L_VIPR_ALG4_QPX15727_1_293_622_1_2018_02_02_Viet_Nam_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTGCTGCCAATGATGCAGAAATTTCAGCCTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTTGTTGACATTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTTGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAGAAACATCTGTGGTTGGCTATTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTCACTTTTGGTCGTCGTGGTGGT >USA_OK10240_6_2017_L_VIPR_ALG4_AVI57395_1_293_622_1_2017_02_07_USA_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTCTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTTGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >PEDV_1456_Zaragoza_Egea_de_los_Caballeros_L_VIPR_ALG4_QKV43732_1_258_587_1_2014_04_29_Spain_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >GDS20_L_VIPR_ALG4_QCQ19803_1_293_622_1_2012_06_22_China_Swine_PEDV ATGGCTAGCAACCAAGTCACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAGAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGATTTAGAGCTCACTTTTGGTCGTCGTGGTGGT >CH_YNKM_8_2013_L_VIPR_ALG4_575502657_293_622_1_2013_09_20_China_Unknown_PEDV ATGGCTAGCAACCAAGTCACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGGTTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAGAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTCACTTTTGGTCGTCGTGGTGGT >JSCZ1601_L_VIPR_ALG4_1126499706_294_623_1_2016_China_Swine_PEDV ATGGCTAGCAACCAAGTCACATTGGCATTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTTGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAGAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTCACCTTTGGTCGTCGTGGTGGT >PEDV_LY_L_VIPR_ALG4_761662557_293_622_1_2014_01_China_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >USA_Missouri270_2014_L_VIPR_ALG4_825144965_248_577_1_2014_02_18_USA_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGCGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >USA_Illinois87_2013_L_VIPR_ALG4_658130554_258_587_1_2013_12_04_USA_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >PEDV_7C_L_VIPR_ALG4_761662515_293_622_1_2011_06_China_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTGTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGTTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTTGTGGTCTGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAGAAACATCTGTGGTTGGCTATTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTCACTTTTGGTCGTCGTGGTGGT >ZJU_G2_2013_L_VIPR_ALG4_ANY27030_1_293_622_1_2013_11_14_China_Swine_PEDV ATGGCTAGCAACCAAGTCACATTGGCATTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGATGACTATGTCATGGTTGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAGAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTCACCTTTGGTCGTCGTGGTGGT >USA_NorthCarolina66_2013_L_VIPR_ALG4_658130428_258_587_1_2013_11_23_USA_Swine_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >PEDV_ROMANIA_L01330_K25_15_02_2015_L_VIPR_ALG4_SNQ28044_1_293_622_1_NA_NA_Unknown_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT >KGS_4_JPN_2014_L_VIPR_ALG4_948549235_235_564_1_2014_04_Japan_Pig_PEDV ATGGCTAGCAACCATGTTACATTGGCTTTTGCCAATGATGCAGAAATTTCAGCTTTTGGCTTTTGCACTGCTAGTGAAGCCGTCTCATACTATTCTGAGGCCGCCGCTAGTGGATTTATGCAATGCCGTTTCGTGTCCTTCGATCTCGCTGACACTGTTGAGGGATTGCTTCCCGAAGACTATGTCATGGTGGTGGTCGGCACTACCAAGCTTAGTGCGTATGTGGACACTTTTGGTAGCCGCCCCAAAAACATTTGTGGTTGGCTGTTATTTTCTAACTGTAATTACTTCCTCGAAGAGTTAGAGCTTACTTTTGGTCGTCGTGGTGGT
>PEDV_10F_L_VIPR_ALG4_761662529_293_622_1_2012_01_China_Swine_PEDV MASNQVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG >USA_Texas424_2014_L_VIPR_ALG4_825144587_248_577_1_2014_10_14_USA_Swine_PEDV MASNHVTLAFANDAEISALGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >USA_Texas435_2014_L_VIPR_ALG4_825144895_248_577_1_2014_11_18_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >USA_Minnesota312_2014_L_VIPR_ALG4_825144699_248_577_1_2014_04_07_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >NW17_L_VIPR_ALG4_ATY72305_1_293_622_1_2015_China_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >PEDV_MEX_JAL_02_2017_L_VIPR_ALG4_AVU05373_1_123_452_1_2017_02_10_Mexico_Swine_PEDV MASNHVTLAIANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKPSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >GDS08_L_VIPR_ALG4_QCQ19935_1_293_622_1_2011_02_10_China_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG >CH_SCCD_2014_L_VIPR_ALG4_1009284165_293_622_1_2014_11_China_Swine_PEDV MASNQVTLALANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG >USA_Minnesota62_2013_L_VIPR_ALG4_658130400_258_587_1_2013_11_18_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >PEDV_JS_A_L_VIPR_ALG4_AZS18877_1_293_622_1_2017_11_10_China_Swine_PEDV MASNHVTLAVANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLVDTVEGLLPEDYVMVVVCTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG >USA_SouthDakota285_2014_L_VIPR_ALG4_825144566_248_577_1_2014_04_02_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >CH_SCZJ_2018_L_VIPR_ALG4_AZL47227_1_293_622_1_2018_02_06_China_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPINICGWLLFSNCNYFLEELELTFGRRGG >PC177_L_VIPR_ALG4_893707341_282_611_1_2013_12_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >CH_SCZY44_2017_L_VIPR_ALG4_AZL47203_1_293_622_1_2017_09_09_China_Swine_PEDV MASNQVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG >GD_XL_2019_L_VIPR_ALG4_QLH02027_1_293_622_1_2019_03_18_China_Swine_PEDV MASNHVTLAVANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLVDTVEGLLPEDYVMVVVCTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG >COL_Cundinamarca03715_2014_L_VIPR_ALG4_QGQ60239_1_281_610_1_2014_03_16_Colombia_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >IBT_VN_L_VIPR_ALG4_QPX15727_1_293_622_1_2018_02_02_Viet_Nam_Swine_PEDV MASNHVTLAAANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLVDIVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG >USA_OK10240_6_2017_L_VIPR_ALG4_AVI57395_1_293_622_1_2017_02_07_USA_Swine_PEDV MASNHVTLAFANDAEISALGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >PEDV_1456_Zaragoza_Egea_de_los_Caballeros_L_VIPR_ALG4_QKV43732_1_258_587_1_2014_04_29_Spain_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >GDS20_L_VIPR_ALG4_QCQ19803_1_293_622_1_2012_06_22_China_Swine_PEDV MASNQVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEDLELTFGRRGG >CH_YNKM_8_2013_L_VIPR_ALG4_575502657_293_622_1_2013_09_20_China_Unknown_PEDV MASNQVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG >JSCZ1601_L_VIPR_ALG4_1126499706_294_623_1_2016_China_Swine_PEDV MASNQVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG >PEDV_LY_L_VIPR_ALG4_761662557_293_622_1_2014_01_China_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >USA_Missouri270_2014_L_VIPR_ALG4_825144965_248_577_1_2014_02_18_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVAGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >USA_Illinois87_2013_L_VIPR_ALG4_658130554_258_587_1_2013_12_04_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >PEDV_7C_L_VIPR_ALG4_761662515_293_622_1_2011_06_China_Swine_PEDV MASNHVTLAVANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLVDTVEGLLPEDYVMVVVCTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG >ZJU_G2_2013_L_VIPR_ALG4_ANY27030_1_293_622_1_2013_11_14_China_Swine_PEDV MASNQVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPDDYVMVVVGTTKLSAYVDTFGSRPRNICGWLLFSNCNYFLEELELTFGRRGG >USA_NorthCarolina66_2013_L_VIPR_ALG4_658130428_258_587_1_2013_11_23_USA_Swine_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >PEDV_ROMANIA_L01330_K25_15_02_2015_L_VIPR_ALG4_SNQ28044_1_293_622_1_NA_NA_Unknown_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG >KGS_4_JPN_2014_L_VIPR_ALG4_948549235_235_564_1_2014_04_Japan_Pig_PEDV MASNHVTLAFANDAEISAFGFCTASEAVSYYSEAAASGFMQCRFVSFDLADTVEGLLPEDYVMVVVGTTKLSAYVDTFGSRPKNICGWLLFSNCNYFLEELELTFGRRGG
Reading sequence file /data//pss_subsets/LZW_L_VIPR_ALG4_672096710_293_622_1_2012_02_China_Swine_PEDV.result/original_alignment/codeml/fasta/LZW_L_VIPR_ALG4_672096710_293_622_1_2012_02_China_Swine_PEDV.result.1
Found 30 sequences of length 330
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 1.5%
Found 14 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 3
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 17 polymorphic sites
**p-Value(s)**
----------
NSS: 5.80e-02 (1000 permutations)
Max Chi^2: 9.20e-01 (1000 permutations)
PHI (Permutation): 3.50e-01 (1000 permutations)
PHI (Normal): 1.20e-01
#NEXUS
[ID: 0882076890]
begin taxa;
dimensions ntax=30;
taxlabels
CH_SCZJ_2018_L_VIPR_ALG4_AZL47227_1_293_622_1_2018_02_06_China_Swine_PEDV
USA_SouthDakota285_2014_L_VIPR_ALG4_825144566_248_577_1_2014_04_02_USA_Swine_PEDV
PC177_L_VIPR_ALG4_893707341_282_611_1_2013_12_USA_Swine_PEDV
IBT_VN_L_VIPR_ALG4_QPX15727_1_293_622_1_2018_02_02_Viet_Nam_Swine_PEDV
COL_Cundinamarca03715_2014_L_VIPR_ALG4_QGQ60239_1_281_610_1_2014_03_16_Colombia_Swine_PEDV
USA_OK10240_6_2017_L_VIPR_ALG4_AVI57395_1_293_622_1_2017_02_07_USA_Swine_PEDV
JSCZ1601_L_VIPR_ALG4_1126499706_294_623_1_2016_China_Swine_PEDV
CH_YNKM_8_2013_L_VIPR_ALG4_575502657_293_622_1_2013_09_20_China_Unknown_PEDV
ZJU_G2_2013_L_VIPR_ALG4_ANY27030_1_293_622_1_2013_11_14_China_Swine_PEDV
PEDV_7C_L_VIPR_ALG4_761662515_293_622_1_2011_06_China_Swine_PEDV
USA_Minnesota312_2014_L_VIPR_ALG4_825144699_248_577_1_2014_04_07_USA_Swine_PEDV
KGS_4_JPN_2014_L_VIPR_ALG4_948549235_235_564_1_2014_04_Japan_Pig_PEDV
CH_SCCD_2014_L_VIPR_ALG4_1009284165_293_622_1_2014_11_China_Swine_PEDV
PEDV_10F_L_VIPR_ALG4_761662529_293_622_1_2012_01_China_Swine_PEDV
USA_Texas435_2014_L_VIPR_ALG4_825144895_248_577_1_2014_11_18_USA_Swine_PEDV
USA_Texas424_2014_L_VIPR_ALG4_825144587_248_577_1_2014_10_14_USA_Swine_PEDV
PEDV_MEX_JAL_02_2017_L_VIPR_ALG4_AVU05373_1_123_452_1_2017_02_10_Mexico_Swine_PEDV
NW17_L_VIPR_ALG4_ATY72305_1_293_622_1_2015_China_Swine_PEDV
GDS08_L_VIPR_ALG4_QCQ19935_1_293_622_1_2011_02_10_China_Swine_PEDV
PEDV_JS_A_L_VIPR_ALG4_AZS18877_1_293_622_1_2017_11_10_China_Swine_PEDV
CH_SCZY44_2017_L_VIPR_ALG4_AZL47203_1_293_622_1_2017_09_09_China_Swine_PEDV
GD_XL_2019_L_VIPR_ALG4_QLH02027_1_293_622_1_2019_03_18_China_Swine_PEDV
GDS20_L_VIPR_ALG4_QCQ19803_1_293_622_1_2012_06_22_China_Swine_PEDV
PEDV_1456_Zaragoza_Egea_de_los_Caballeros_L_VIPR_ALG4_QKV43732_1_258_587_1_2014_04_29_Spain_Swine_PEDV
USA_Illinois87_2013_L_VIPR_ALG4_658130554_258_587_1_2013_12_04_USA_Swine_PEDV
PEDV_LY_L_VIPR_ALG4_761662557_293_622_1_2014_01_China_Swine_PEDV
USA_Missouri270_2014_L_VIPR_ALG4_825144965_248_577_1_2014_02_18_USA_Swine_PEDV
USA_Minnesota62_2013_L_VIPR_ALG4_658130400_258_587_1_2013_11_18_USA_Swine_PEDV
PEDV_ROMANIA_L01330_K25_15_02_2015_L_VIPR_ALG4_SNQ28044_1_293_622_1_NA_NA_Unknown_PEDV
USA_NorthCarolina66_2013_L_VIPR_ALG4_658130428_258_587_1_2013_11_23_USA_Swine_PEDV
;
end;
begin trees;
translate
1 CH_SCZJ_2018_L_VIPR_ALG4_AZL47227_1_293_622_1_2018_02_06_China_Swine_PEDV,
2 USA_SouthDakota285_2014_L_VIPR_ALG4_825144566_248_577_1_2014_04_02_USA_Swine_PEDV,
3 PC177_L_VIPR_ALG4_893707341_282_611_1_2013_12_USA_Swine_PEDV,
4 IBT_VN_L_VIPR_ALG4_QPX15727_1_293_622_1_2018_02_02_Viet_Nam_Swine_PEDV,
5 COL_Cundinamarca03715_2014_L_VIPR_ALG4_QGQ60239_1_281_610_1_2014_03_16_Colombia_Swine_PEDV,
6 USA_OK10240_6_2017_L_VIPR_ALG4_AVI57395_1_293_622_1_2017_02_07_USA_Swine_PEDV,
7 JSCZ1601_L_VIPR_ALG4_1126499706_294_623_1_2016_China_Swine_PEDV,
8 CH_YNKM_8_2013_L_VIPR_ALG4_575502657_293_622_1_2013_09_20_China_Unknown_PEDV,
9 ZJU_G2_2013_L_VIPR_ALG4_ANY27030_1_293_622_1_2013_11_14_China_Swine_PEDV,
10 PEDV_7C_L_VIPR_ALG4_761662515_293_622_1_2011_06_China_Swine_PEDV,
11 USA_Minnesota312_2014_L_VIPR_ALG4_825144699_248_577_1_2014_04_07_USA_Swine_PEDV,
12 KGS_4_JPN_2014_L_VIPR_ALG4_948549235_235_564_1_2014_04_Japan_Pig_PEDV,
13 CH_SCCD_2014_L_VIPR_ALG4_1009284165_293_622_1_2014_11_China_Swine_PEDV,
14 PEDV_10F_L_VIPR_ALG4_761662529_293_622_1_2012_01_China_Swine_PEDV,
15 USA_Texas435_2014_L_VIPR_ALG4_825144895_248_577_1_2014_11_18_USA_Swine_PEDV,
16 USA_Texas424_2014_L_VIPR_ALG4_825144587_248_577_1_2014_10_14_USA_Swine_PEDV,
17 PEDV_MEX_JAL_02_2017_L_VIPR_ALG4_AVU05373_1_123_452_1_2017_02_10_Mexico_Swine_PEDV,
18 NW17_L_VIPR_ALG4_ATY72305_1_293_622_1_2015_China_Swine_PEDV,
19 GDS08_L_VIPR_ALG4_QCQ19935_1_293_622_1_2011_02_10_China_Swine_PEDV,
20 PEDV_JS_A_L_VIPR_ALG4_AZS18877_1_293_622_1_2017_11_10_China_Swine_PEDV,
21 CH_SCZY44_2017_L_VIPR_ALG4_AZL47203_1_293_622_1_2017_09_09_China_Swine_PEDV,
22 GD_XL_2019_L_VIPR_ALG4_QLH02027_1_293_622_1_2019_03_18_China_Swine_PEDV,
23 GDS20_L_VIPR_ALG4_QCQ19803_1_293_622_1_2012_06_22_China_Swine_PEDV,
24 PEDV_1456_Zaragoza_Egea_de_los_Caballeros_L_VIPR_ALG4_QKV43732_1_258_587_1_2014_04_29_Spain_Swine_PEDV,
25 USA_Illinois87_2013_L_VIPR_ALG4_658130554_258_587_1_2013_12_04_USA_Swine_PEDV,
26 PEDV_LY_L_VIPR_ALG4_761662557_293_622_1_2014_01_China_Swine_PEDV,
27 USA_Missouri270_2014_L_VIPR_ALG4_825144965_248_577_1_2014_02_18_USA_Swine_PEDV,
28 USA_Minnesota62_2013_L_VIPR_ALG4_658130400_258_587_1_2013_11_18_USA_Swine_PEDV,
29 PEDV_ROMANIA_L01330_K25_15_02_2015_L_VIPR_ALG4_SNQ28044_1_293_622_1_NA_NA_Unknown_PEDV,
30 USA_NorthCarolina66_2013_L_VIPR_ALG4_658130428_258_587_1_2013_11_23_USA_Swine_PEDV
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:3.041473e-03,(((2:7.610717e-04,3:7.865373e-04,5:7.839575e-04,(6:7.920399e-04,16:7.841040e-04)1.000:3.082678e-03,11:7.748906e-04,12:7.858958e-04,15:8.088375e-04,17:3.042928e-03,18:7.794605e-04,24:7.539852e-04,25:7.862134e-04,26:7.932564e-04,27:1.906376e-03,28:7.930925e-04,29:7.630603e-04,30:7.990146e-04)0.988:3.238723e-03,(4:5.652098e-03,(10:7.763582e-04,20:7.976652e-04,22:8.060445e-04)0.863:1.938596e-03)1.000:6.935726e-03)0.822:1.961329e-03,19:8.181136e-04)0.601:1.653895e-03,((7:8.045316e-04,9:1.924247e-03,21:3.067846e-03)1.000:4.373576e-03,8:1.964096e-03,13:1.901572e-03,14:7.928347e-04,23:1.891472e-03)0.568:1.839458e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:3.041473e-03,(((2:7.610717e-04,3:7.865373e-04,5:7.839575e-04,(6:7.920399e-04,16:7.841040e-04):3.082678e-03,11:7.748906e-04,12:7.858958e-04,15:8.088375e-04,17:3.042928e-03,18:7.794605e-04,24:7.539852e-04,25:7.862134e-04,26:7.932564e-04,27:1.906376e-03,28:7.930925e-04,29:7.630603e-04,30:7.990146e-04):3.238723e-03,(4:5.652098e-03,(10:7.763582e-04,20:7.976652e-04,22:8.060445e-04):1.938596e-03):6.935726e-03):1.961329e-03,19:8.181136e-04):1.653895e-03,((7:8.045316e-04,9:1.924247e-03,21:3.067846e-03):4.373576e-03,8:1.964096e-03,13:1.901572e-03,14:7.928347e-04,23:1.891472e-03):1.839458e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -674.84 -692.60
2 -674.29 -693.04
--------------------------------------
TOTAL -674.53 -692.84
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.103102 0.000525 0.061581 0.149193 0.101024 1329.14 1383.99 1.000
r(A<->C){all} 0.131387 0.004652 0.023319 0.269231 0.120783 187.27 218.42 1.005
r(A<->G){all} 0.142683 0.004573 0.025689 0.276886 0.132121 231.56 274.41 1.000
r(A<->T){all} 0.171495 0.004495 0.058897 0.305522 0.161596 139.97 239.53 1.001
r(C<->G){all} 0.033746 0.001128 0.000008 0.101200 0.023514 340.55 370.42 1.000
r(C<->T){all} 0.361217 0.007661 0.204502 0.536175 0.358611 293.52 311.81 1.000
r(G<->T){all} 0.159472 0.003627 0.057656 0.277762 0.151172 229.51 291.88 1.000
pi(A){all} 0.198602 0.000440 0.158771 0.239433 0.197852 717.17 898.55 1.000
pi(C){all} 0.223892 0.000469 0.182901 0.266706 0.222984 905.84 1009.21 1.000
pi(G){all} 0.245029 0.000527 0.201416 0.292622 0.244926 794.23 879.16 1.000
pi(T){all} 0.332477 0.000600 0.284229 0.378570 0.332514 987.18 1006.73 1.000
alpha{1,2} 0.495748 0.405915 0.000190 1.742699 0.272084 634.54 716.04 1.001
alpha{3} 1.510256 1.299298 0.002161 3.715868 1.237413 1045.64 1072.09 1.001
pinvar{all} 0.385854 0.038984 0.000337 0.695691 0.394868 612.29 671.12 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/LZW_L_VIPR_ALG4_672096710_293_622_1_2012_02_China_Swine_PEDV.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 30 ls = 110
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 7 6 7 7 7 6 | Ser TCT 2 2 2 2 2 2 | Tyr TAT 3 3 3 3 3 3 | Cys TGT 2 2 2 2 2 2
TTC 3 3 3 3 3 3 | TCC 1 1 1 1 1 1 | TAC 2 2 2 2 2 2 | TGC 2 2 2 2 2 2
Leu TTA 2 2 2 2 2 2 | TCA 2 2 2 2 2 2 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 2 2 2 2 2 2 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 2 5 3 3 3 2 | Pro CCT 0 0 0 0 0 1 | His CAT 0 1 1 1 1 1 | Arg CGT 3 3 3 3 3 3
CTC 3 1 2 2 2 2 | CCC 2 2 2 2 2 2 | CAC 0 0 0 0 0 0 | CGC 1 1 1 1 1 1
CTA 0 0 0 0 0 0 | CCA 0 0 0 0 0 0 | Gln CAA 2 1 1 1 1 1 | CGA 0 0 0 0 0 0
CTG 1 1 1 1 1 1 | CCG 0 0 0 0 0 0 | CAG 0 0 0 0 0 0 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 2 2 2 3 | Thr ACT 5 5 5 5 5 5 | Asn AAT 2 2 2 2 2 2 | Ser AGT 3 3 3 3 3 3
ATC 0 0 0 0 0 0 | ACC 1 1 1 1 1 1 | AAC 3 3 3 3 3 3 | AGC 2 2 2 2 2 2
ATA 0 0 0 0 0 0 | ACA 1 1 1 1 1 1 | Lys AAA 0 1 1 1 1 1 | Arg AGA 1 0 0 0 0 0
Met ATG 3 3 3 3 3 3 | ACG 0 0 0 0 0 0 | AAG 1 1 1 1 1 1 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 1 2 2 2 2 2 | Ala GCT 6 6 6 6 6 6 | Asp GAT 2 2 2 2 2 2 | Gly GGT 5 5 5 5 5 5
GTC 4 3 3 3 3 3 | GCC 4 4 4 4 4 4 | GAC 3 3 3 3 3 3 | GGC 2 2 2 2 2 2
GTA 0 0 0 0 0 0 | GCA 1 1 1 1 1 1 | Glu GAA 4 4 4 4 4 4 | GGA 2 2 2 2 2 2
GTG 4 4 4 4 4 4 | GCG 1 1 1 1 1 1 | GAG 4 4 4 4 4 4 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 7 6 7 6 7 7 | Ser TCT 2 2 2 2 2 2 | Tyr TAT 3 3 3 3 3 3 | Cys TGT 2 2 2 2 2 2
TTC 3 3 3 3 3 3 | TCC 1 1 1 1 1 1 | TAC 2 2 2 2 2 2 | TGC 2 2 2 3 2 2
Leu TTA 2 3 2 2 2 2 | TCA 2 2 2 2 2 2 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 2 2 2 2 2 2 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 2 2 3 2 3 2 | Pro CCT 0 0 0 0 0 0 | His CAT 1 0 1 1 1 0 | Arg CGT 3 3 3 3 3 3
CTC 3 3 2 3 2 3 | CCC 2 2 2 2 2 2 | CAC 0 0 0 0 0 1 | CGC 1 1 1 1 1 1
CTA 0 0 0 1 0 0 | CCA 0 0 0 0 0 0 | Gln CAA 1 2 1 1 1 1 | CGA 0 0 0 0 0 0
CTG 1 1 1 0 1 1 | CCG 0 0 0 0 0 0 | CAG 0 0 0 0 0 0 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 2 1 2 2 | Thr ACT 5 5 5 5 5 5 | Asn AAT 2 2 2 2 2 2 | Ser AGT 3 3 3 3 3 3
ATC 0 0 0 1 0 0 | ACC 1 1 1 1 1 1 | AAC 3 3 3 3 3 3 | AGC 2 2 2 2 2 2
ATA 0 0 0 0 0 1 | ACA 1 1 1 1 1 1 | Lys AAA 0 0 1 0 1 0 | Arg AGA 1 1 0 1 0 0
Met ATG 3 3 3 3 3 3 | ACG 0 0 0 0 0 0 | AAG 1 1 1 1 1 1 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 1 1 2 5 2 1 | Ala GCT 6 6 6 5 6 6 | Asp GAT 2 2 2 2 2 2 | Gly GGT 5 5 5 5 5 5
GTC 4 4 3 3 3 4 | GCC 4 4 4 4 4 4 | GAC 3 3 3 3 3 3 | GGC 2 2 2 1 2 2
GTA 0 0 0 0 0 0 | GCA 1 1 1 1 1 1 | Glu GAA 4 4 4 4 4 4 | GGA 2 2 2 2 2 2
GTG 4 4 4 3 4 4 | GCG 1 1 1 1 1 1 | GAG 4 4 4 4 4 4 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 7 7 6 7 6 6 | Ser TCT 2 2 2 2 2 2 | Tyr TAT 3 3 3 3 3 3 | Cys TGT 2 2 2 2 2 2
TTC 3 3 3 3 3 3 | TCC 1 1 1 1 1 1 | TAC 2 2 2 2 2 2 | TGC 2 2 3 2 2 2
Leu TTA 2 2 2 2 2 2 | TCA 2 2 2 2 2 2 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 2 2 2 2 2 2 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 2 2 3 3 5 | Pro CCT 0 0 0 0 0 0 | His CAT 1 0 1 1 1 1 | Arg CGT 3 3 3 3 3 3
CTC 2 3 3 2 2 1 | CCC 2 2 2 2 2 2 | CAC 0 0 0 0 0 0 | CGC 1 1 1 1 1 1
CTA 0 0 1 0 1 0 | CCA 0 0 0 0 0 0 | Gln CAA 1 2 1 1 1 1 | CGA 0 0 0 0 0 0
CTG 1 1 0 1 0 1 | CCG 0 0 0 0 0 0 | CAG 0 0 0 0 0 0 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 1 2 2 2 | Thr ACT 5 4 5 5 4 5 | Asn AAT 2 2 2 2 2 2 | Ser AGT 3 3 3 3 3 3
ATC 0 0 1 0 1 0 | ACC 1 2 1 1 1 1 | AAC 3 3 3 3 3 3 | AGC 2 2 2 2 2 2
ATA 0 0 0 0 0 0 | ACA 1 1 1 1 1 1 | Lys AAA 1 0 0 1 0 1 | Arg AGA 0 1 1 0 1 0
Met ATG 3 3 3 3 3 3 | ACG 0 0 0 0 0 0 | AAG 1 1 1 1 1 1 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 2 2 5 2 4 2 | Ala GCT 6 5 5 6 5 6 | Asp GAT 2 2 2 2 2 2 | Gly GGT 5 4 5 5 5 5
GTC 3 3 3 3 3 3 | GCC 4 4 4 4 5 4 | GAC 3 3 3 3 3 3 | GGC 2 3 1 2 2 2
GTA 0 1 0 0 0 0 | GCA 1 2 1 1 1 1 | Glu GAA 4 4 4 4 4 4 | GGA 2 2 2 2 2 2
GTG 4 3 3 4 3 4 | GCG 1 1 1 1 1 1 | GAG 4 4 4 4 4 4 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 7 7 7 7 7 7 | Ser TCT 2 2 2 2 2 2 | Tyr TAT 3 3 3 3 3 3 | Cys TGT 2 2 2 2 2 2
TTC 3 3 3 3 3 3 | TCC 1 1 1 1 1 1 | TAC 2 2 2 2 2 2 | TGC 2 2 2 2 2 2
Leu TTA 2 2 2 2 2 2 | TCA 2 2 2 2 2 2 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 2 2 2 2 2 2 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 2 2 2 3 3 | Pro CCT 0 0 0 0 0 0 | His CAT 1 0 0 0 1 1 | Arg CGT 3 3 3 3 3 3
CTC 2 3 3 3 2 2 | CCC 2 2 2 2 2 2 | CAC 0 0 0 0 0 0 | CGC 1 1 1 1 1 1
CTA 0 0 0 0 0 0 | CCA 0 0 0 0 0 0 | Gln CAA 1 2 2 2 1 1 | CGA 0 0 0 0 0 0
CTG 1 1 1 1 1 1 | CCG 0 0 0 0 0 0 | CAG 0 0 0 0 0 0 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 2 2 2 2 | Thr ACT 5 5 5 4 5 5 | Asn AAT 2 2 2 2 2 2 | Ser AGT 3 3 3 3 3 3
ATC 0 0 0 0 0 0 | ACC 1 1 1 2 1 1 | AAC 3 3 3 3 3 3 | AGC 2 2 2 2 2 2
ATA 0 0 0 0 0 0 | ACA 1 1 1 1 1 1 | Lys AAA 1 0 0 0 1 1 | Arg AGA 0 1 1 1 0 0
Met ATG 3 3 3 3 3 3 | ACG 0 0 0 0 0 0 | AAG 1 1 1 1 1 1 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 2 1 1 2 2 2 | Ala GCT 6 6 6 5 6 6 | Asp GAT 2 3 2 2 2 2 | Gly GGT 5 5 5 5 5 5
GTC 3 4 4 4 3 3 | GCC 4 4 4 4 4 4 | GAC 3 3 3 3 3 3 | GGC 2 2 2 2 2 2
GTA 0 0 0 0 0 0 | GCA 1 1 1 2 1 1 | Glu GAA 4 4 4 4 4 4 | GGA 2 2 1 2 2 2
GTG 4 4 4 3 4 4 | GCG 1 1 1 1 1 2 | GAG 4 3 4 4 4 3 | GGG 0 0 1 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 7 6 7 7 7 7 | Ser TCT 2 2 2 2 2 2 | Tyr TAT 3 3 3 3 3 3 | Cys TGT 2 2 2 2 2 2
TTC 3 3 3 3 3 3 | TCC 1 1 1 1 1 1 | TAC 2 2 2 2 2 2 | TGC 2 3 2 2 2 2
Leu TTA 2 2 2 2 2 2 | TCA 2 2 2 2 2 2 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 2 2 2 2 2 2 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 2 2 3 3 3 | Pro CCT 0 0 0 0 0 0 | His CAT 1 1 0 1 1 1 | Arg CGT 3 3 3 3 3 3
CTC 2 3 3 2 2 2 | CCC 2 2 2 2 2 2 | CAC 0 0 0 0 0 0 | CGC 1 1 1 1 1 1
CTA 0 1 0 0 0 0 | CCA 0 0 0 0 0 0 | Gln CAA 1 1 2 1 1 1 | CGA 0 0 0 0 0 0
CTG 1 0 1 1 1 1 | CCG 0 0 0 0 0 0 | CAG 0 0 0 0 0 0 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 1 2 2 2 2 | Thr ACT 5 5 4 5 5 5 | Asn AAT 2 2 2 2 2 2 | Ser AGT 3 3 3 3 3 3
ATC 0 1 0 0 0 0 | ACC 1 1 2 1 1 1 | AAC 3 3 3 3 3 3 | AGC 2 2 2 2 2 2
ATA 0 0 0 0 0 0 | ACA 1 1 1 1 1 1 | Lys AAA 1 0 0 1 1 1 | Arg AGA 0 1 1 0 0 0
Met ATG 3 3 3 3 3 3 | ACG 0 0 0 0 0 0 | AAG 1 1 1 1 1 1 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 2 5 2 2 2 2 | Ala GCT 6 5 5 6 6 6 | Asp GAT 2 2 3 2 2 2 | Gly GGT 5 5 5 5 5 5
GTC 3 3 4 3 3 3 | GCC 4 4 4 4 4 4 | GAC 3 3 3 3 3 3 | GGC 2 1 2 2 2 2
GTA 0 0 0 0 0 0 | GCA 1 1 2 1 1 1 | Glu GAA 4 4 3 4 4 4 | GGA 2 2 2 2 2 2
GTG 4 3 3 4 4 4 | GCG 1 1 1 1 1 1 | GAG 4 4 4 4 4 4 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C312
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.23636 G:0.21818
position 3: T:0.40909 C:0.30000 A:0.13636 G:0.15455
Average T:0.32727 C:0.22121 A:0.19697 G:0.25455
#2: C627
position 1: T:0.25455 C:0.13636 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.44545 C:0.27273 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#3: C628
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#4: C545
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#5: C284
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#6: C389
position 1: T:0.25455 C:0.12727 A:0.22727 G:0.39091
position 2: T:0.30000 C:0.24545 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33030 C:0.21818 A:0.20000 G:0.25152
#7: C117
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.23636 G:0.21818
position 3: T:0.41818 C:0.30000 A:0.12727 G:0.15455
Average T:0.33030 C:0.22121 A:0.19394 G:0.25455
#8: C60
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.23636 G:0.21818
position 3: T:0.40000 C:0.30000 A:0.14545 G:0.15455
Average T:0.32424 C:0.22121 A:0.20000 G:0.25455
#9: C561
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#10: C380
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.31818 C:0.22727 A:0.23636 G:0.21818
position 3: T:0.42727 C:0.30000 A:0.13636 G:0.13636
Average T:0.33636 C:0.21818 A:0.19697 G:0.24848
#11: C619
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#12: C65
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.31818 C:0.23636 A:0.23636 G:0.20909
position 3: T:0.40909 C:0.30909 A:0.12727 G:0.15455
Average T:0.33030 C:0.22424 A:0.19394 G:0.25152
#13: C295
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#14: C68
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.23636 G:0.21818
position 3: T:0.39091 C:0.30909 A:0.15455 G:0.14545
Average T:0.32121 C:0.22424 A:0.20303 G:0.25152
#15: C165
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.31818 C:0.22727 A:0.23636 G:0.21818
position 3: T:0.42727 C:0.30000 A:0.13636 G:0.13636
Average T:0.33636 C:0.21818 A:0.19697 G:0.24848
#16: C93
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#17: C196
position 1: T:0.25455 C:0.12727 A:0.21818 G:0.40000
position 2: T:0.31818 C:0.22727 A:0.23636 G:0.21818
position 3: T:0.42727 C:0.30000 A:0.13636 G:0.13636
Average T:0.33333 C:0.21818 A:0.19697 G:0.25152
#18: C597
position 1: T:0.25455 C:0.13636 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.44545 C:0.27273 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#19: C315
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#20: C129
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.23636 G:0.21818
position 3: T:0.41818 C:0.30000 A:0.13636 G:0.14545
Average T:0.33030 C:0.22121 A:0.19697 G:0.25152
#21: C75
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.23636 G:0.21818
position 3: T:0.40909 C:0.30000 A:0.12727 G:0.16364
Average T:0.32727 C:0.22121 A:0.19394 G:0.25758
#22: C208
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.23636 G:0.21818
position 3: T:0.40000 C:0.30909 A:0.14545 G:0.14545
Average T:0.32424 C:0.22424 A:0.20000 G:0.25152
#23: C381
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#24: C584
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.24545 A:0.23636 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21818 A:0.19394 G:0.25152
#25: C493
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#26: C337
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.31818 C:0.22727 A:0.23636 G:0.21818
position 3: T:0.42727 C:0.30000 A:0.13636 G:0.13636
Average T:0.33636 C:0.21818 A:0.19697 G:0.24848
#27: C651
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.23636 G:0.21818
position 3: T:0.40909 C:0.30909 A:0.13636 G:0.14545
Average T:0.32727 C:0.22424 A:0.19697 G:0.25152
#28: C596
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#29: C411
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
#30: C224
position 1: T:0.26364 C:0.12727 A:0.21818 G:0.39091
position 2: T:0.30909 C:0.23636 A:0.24545 G:0.20909
position 3: T:0.43636 C:0.28182 A:0.12727 G:0.15455
Average T:0.33636 C:0.21515 A:0.19697 G:0.25152
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 202 | Ser S TCT 60 | Tyr Y TAT 90 | Cys C TGT 60
TTC 90 | TCC 30 | TAC 60 | TGC 63
Leu L TTA 61 | TCA 60 | *** * TAA 0 | *** * TGA 0
TTG 60 | TCG 0 | TAG 0 | Trp W TGG 30
------------------------------------------------------------------------------
Leu L CTT 81 | Pro P CCT 1 | His H CAT 22 | Arg R CGT 90
CTC 70 | CCC 60 | CAC 1 | CGC 30
CTA 4 | CCA 0 | Gln Q CAA 37 | CGA 0
CTG 26 | CCG 0 | CAG 0 | CGG 0
------------------------------------------------------------------------------
Ile I ATT 58 | Thr T ACT 146 | Asn N AAT 60 | Ser S AGT 90
ATC 4 | ACC 33 | AAC 90 | AGC 60
ATA 1 | ACA 30 | Lys K AAA 17 | Arg R AGA 12
Met M ATG 90 | ACG 0 | AAG 30 | AGG 0
------------------------------------------------------------------------------
Val V GTT 65 | Ala A GCT 173 | Asp D GAT 62 | Gly G GGT 149
GTC 98 | GCC 121 | GAC 90 | GGC 58
GTA 1 | GCA 33 | Glu E GAA 119 | GGA 59
GTG 113 | GCG 31 | GAG 118 | GGG 1
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.26242 C:0.12788 A:0.21848 G:0.39121
position 2: T:0.31030 C:0.23576 A:0.24121 G:0.21273
position 3: T:0.42697 C:0.29030 A:0.13152 G:0.15121
Average T:0.33323 C:0.21798 A:0.19707 G:0.25172
Model 1: NearlyNeutral (2 categories)
TREE # 1: (12, (((11, 13, 16, (18, 2), 4, 30, 3, 6, 5, 19, 25, 23, 24, 9, 29, 28), (17, (26, 10, 15))), 7), ((22, 27, 14), 21, 8, 1, 20)); MP score: 30
lnL(ntime: 38 np: 41): -634.901618 +0.000000
31..12 31..32 32..33 33..34 34..11 34..13 34..16 34..35 35..18 35..2 34..4 34..30 34..3 34..6 34..5 34..19 34..25 34..23 34..24 34..9 34..29 34..28 33..36 36..17 36..37 37..26 37..10 37..15 32..7 31..38 38..39 39..22 39..27 39..14 38..21 38..8 38..1 38..20
0.019279 0.000004 0.008792 0.020250 0.000004 0.000004 0.000004 0.019352 0.000004 0.000004 0.000004 0.000004 0.000004 0.019422 0.000004 0.000004 0.000004 0.000004 0.009612 0.000004 0.000004 0.000004 0.050549 0.038976 0.009540 0.000004 0.000004 0.000004 0.000004 0.009655 0.029525 0.000004 0.009666 0.019595 0.009711 0.009796 0.000004 0.009668 1.653739 0.791384 0.047133
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.293476
(12: 0.019279, (((11: 0.000004, 13: 0.000004, 16: 0.000004, (18: 0.000004, 2: 0.000004): 0.019352, 4: 0.000004, 30: 0.000004, 3: 0.000004, 6: 0.019422, 5: 0.000004, 19: 0.000004, 25: 0.000004, 23: 0.000004, 24: 0.009612, 9: 0.000004, 29: 0.000004, 28: 0.000004): 0.020250, (17: 0.038976, (26: 0.000004, 10: 0.000004, 15: 0.000004): 0.009540): 0.050549): 0.008792, 7: 0.000004): 0.000004, ((22: 0.000004, 27: 0.009666, 14: 0.019595): 0.029525, 21: 0.009711, 8: 0.009796, 1: 0.000004, 20: 0.009668): 0.009655);
(C65: 0.019279, (((C619: 0.000004, C295: 0.000004, C93: 0.000004, (C597: 0.000004, C627: 0.000004): 0.019352, C545: 0.000004, C224: 0.000004, C628: 0.000004, C389: 0.019422, C284: 0.000004, C315: 0.000004, C493: 0.000004, C381: 0.000004, C584: 0.009612, C561: 0.000004, C411: 0.000004, C596: 0.000004): 0.020250, (C196: 0.038976, (C337: 0.000004, C380: 0.000004, C165: 0.000004): 0.009540): 0.050549): 0.008792, C117: 0.000004): 0.000004, ((C208: 0.000004, C651: 0.009666, C68: 0.019595): 0.029525, C75: 0.009711, C60: 0.009796, C312: 0.000004, C129: 0.009668): 0.009655);
Detailed output identifying parameters
kappa (ts/tv) = 1.65374
MLEs of dN/dS (w) for site classes (K=2)
p: 0.79138 0.20862
w: 0.04713 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.019 247.7 82.3 0.2459 0.0036 0.0148 0.9 1.2
31..32 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
32..33 0.009 247.7 82.3 0.2459 0.0017 0.0068 0.4 0.6
33..34 0.020 247.7 82.3 0.2459 0.0038 0.0156 0.9 1.3
34..11 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..13 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..16 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..35 0.019 247.7 82.3 0.2459 0.0037 0.0149 0.9 1.2
35..18 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
35..2 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..4 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..30 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..3 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..6 0.019 247.7 82.3 0.2459 0.0037 0.0149 0.9 1.2
34..5 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..19 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..25 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..23 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..24 0.010 247.7 82.3 0.2459 0.0018 0.0074 0.4 0.6
34..9 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..29 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
34..28 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
33..36 0.051 247.7 82.3 0.2459 0.0095 0.0388 2.4 3.2
36..17 0.039 247.7 82.3 0.2459 0.0074 0.0299 1.8 2.5
36..37 0.010 247.7 82.3 0.2459 0.0018 0.0073 0.4 0.6
37..26 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
37..10 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
37..15 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
32..7 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
31..38 0.010 247.7 82.3 0.2459 0.0018 0.0074 0.5 0.6
38..39 0.030 247.7 82.3 0.2459 0.0056 0.0227 1.4 1.9
39..22 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
39..27 0.010 247.7 82.3 0.2459 0.0018 0.0074 0.5 0.6
39..14 0.020 247.7 82.3 0.2459 0.0037 0.0150 0.9 1.2
38..21 0.010 247.7 82.3 0.2459 0.0018 0.0075 0.5 0.6
38..8 0.010 247.7 82.3 0.2459 0.0018 0.0075 0.5 0.6
38..1 0.000 247.7 82.3 0.2459 0.0000 0.0000 0.0 0.0
38..20 0.010 247.7 82.3 0.2459 0.0018 0.0074 0.5 0.6
Time used: 1:19
Model 2: PositiveSelection (3 categories)
TREE # 1: (12, (((11, 13, 16, (18, 2), 4, 30, 3, 6, 5, 19, 25, 23, 24, 9, 29, 28), (17, (26, 10, 15))), 7), ((22, 27, 14), 21, 8, 1, 20)); MP score: 30
lnL(ntime: 38 np: 43): -632.908114 +0.000000
31..12 31..32 32..33 33..34 34..11 34..13 34..16 34..35 35..18 35..2 34..4 34..30 34..3 34..6 34..5 34..19 34..25 34..23 34..24 34..9 34..29 34..28 33..36 36..17 36..37 37..26 37..10 37..15 32..7 31..38 38..39 39..22 39..27 39..14 38..21 38..8 38..1 38..20
0.019486 0.000004 0.009058 0.020278 0.000004 0.000004 0.000004 0.019362 0.000004 0.000004 0.000004 0.000004 0.000004 0.019921 0.000004 0.000004 0.000004 0.000004 0.009610 0.000004 0.000004 0.000004 0.052243 0.039093 0.010237 0.000004 0.000004 0.000004 0.000004 0.009684 0.029748 0.000004 0.009698 0.019691 0.009728 0.010101 0.000004 0.009701 1.851470 0.975009 0.000000 0.183333 6.127317
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.297728
(12: 0.019486, (((11: 0.000004, 13: 0.000004, 16: 0.000004, (18: 0.000004, 2: 0.000004): 0.019362, 4: 0.000004, 30: 0.000004, 3: 0.000004, 6: 0.019921, 5: 0.000004, 19: 0.000004, 25: 0.000004, 23: 0.000004, 24: 0.009610, 9: 0.000004, 29: 0.000004, 28: 0.000004): 0.020278, (17: 0.039093, (26: 0.000004, 10: 0.000004, 15: 0.000004): 0.010237): 0.052243): 0.009058, 7: 0.000004): 0.000004, ((22: 0.000004, 27: 0.009698, 14: 0.019691): 0.029748, 21: 0.009728, 8: 0.010101, 1: 0.000004, 20: 0.009701): 0.009684);
(C65: 0.019486, (((C619: 0.000004, C295: 0.000004, C93: 0.000004, (C597: 0.000004, C627: 0.000004): 0.019362, C545: 0.000004, C224: 0.000004, C628: 0.000004, C389: 0.019921, C284: 0.000004, C315: 0.000004, C493: 0.000004, C381: 0.000004, C584: 0.009610, C561: 0.000004, C411: 0.000004, C596: 0.000004): 0.020278, (C196: 0.039093, (C337: 0.000004, C380: 0.000004, C165: 0.000004): 0.010237): 0.052243): 0.009058, C117: 0.000004): 0.000004, ((C208: 0.000004, C651: 0.009698, C68: 0.019691): 0.029748, C75: 0.009728, C60: 0.010101, C312: 0.000004, C129: 0.009701): 0.009684);
Detailed output identifying parameters
kappa (ts/tv) = 1.85147
MLEs of dN/dS (w) for site classes (K=3)
p: 0.97501 0.00000 0.02499
w: 0.18333 1.00000 6.12732
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.019 246.0 84.0 0.3319 0.0043 0.0129 1.1 1.1
31..32 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
32..33 0.009 246.0 84.0 0.3319 0.0020 0.0060 0.5 0.5
33..34 0.020 246.0 84.0 0.3319 0.0045 0.0135 1.1 1.1
34..11 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..13 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..16 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..35 0.019 246.0 84.0 0.3319 0.0043 0.0129 1.0 1.1
35..18 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
35..2 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..4 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..30 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..3 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..6 0.020 246.0 84.0 0.3319 0.0044 0.0132 1.1 1.1
34..5 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..19 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..25 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..23 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..24 0.010 246.0 84.0 0.3319 0.0021 0.0064 0.5 0.5
34..9 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..29 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
34..28 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
33..36 0.052 246.0 84.0 0.3319 0.0115 0.0347 2.8 2.9
36..17 0.039 246.0 84.0 0.3319 0.0086 0.0260 2.1 2.2
36..37 0.010 246.0 84.0 0.3319 0.0023 0.0068 0.6 0.6
37..26 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
37..10 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
37..15 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
32..7 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
31..38 0.010 246.0 84.0 0.3319 0.0021 0.0064 0.5 0.5
38..39 0.030 246.0 84.0 0.3319 0.0066 0.0198 1.6 1.7
39..22 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
39..27 0.010 246.0 84.0 0.3319 0.0021 0.0064 0.5 0.5
39..14 0.020 246.0 84.0 0.3319 0.0043 0.0131 1.1 1.1
38..21 0.010 246.0 84.0 0.3319 0.0021 0.0065 0.5 0.5
38..8 0.010 246.0 84.0 0.3319 0.0022 0.0067 0.5 0.6
38..1 0.000 246.0 84.0 0.3319 0.0000 0.0000 0.0 0.0
38..20 0.010 246.0 84.0 0.3319 0.0021 0.0064 0.5 0.5
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C312)
Pr(w>1) post mean +- SE for w
10 F 0.999** 6.122
83 R 0.888 5.460
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C312)
Pr(w>1) post mean +- SE for w
10 F 0.927 5.242 +- 2.709
83 R 0.736 4.377 +- 3.036
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 0.376 0.440 0.158 0.024 0.002 0.000 0.000 0.000 0.000 0.000
w2: 0.088 0.116 0.133 0.136 0.127 0.112 0.095 0.079 0.064 0.051
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.004
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.003 0.029
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.003 0.019 0.117
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.003 0.012 0.066 0.242
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.005 0.012 0.031 0.122 0.328
sum of density on p0-p1 = 1.000000
Time used: 5:24
Model 7: beta (10 categories)
TREE # 1: (12, (((11, 13, 16, (18, 2), 4, 30, 3, 6, 5, 19, 25, 23, 24, 9, 29, 28), (17, (26, 10, 15))), 7), ((22, 27, 14), 21, 8, 1, 20)); MP score: 30
lnL(ntime: 38 np: 41): -634.998253 +0.000000
31..12 31..32 32..33 33..34 34..11 34..13 34..16 34..35 35..18 35..2 34..4 34..30 34..3 34..6 34..5 34..19 34..25 34..23 34..24 34..9 34..29 34..28 33..36 36..17 36..37 37..26 37..10 37..15 32..7 31..38 38..39 39..22 39..27 39..14 38..21 38..8 38..1 38..20
0.018867 0.000606 0.008727 0.020126 0.000004 0.000004 0.000004 0.019236 0.000004 0.000004 0.000004 0.000004 0.000004 0.019299 0.000004 0.000004 0.000004 0.000004 0.009552 0.000004 0.000004 0.000004 0.050304 0.038787 0.009439 0.000004 0.000004 0.000004 0.000004 0.009275 0.029357 0.000004 0.009602 0.019477 0.009654 0.009738 0.000004 0.009605 1.635796 0.017601 0.054843
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.291737
(12: 0.018867, (((11: 0.000004, 13: 0.000004, 16: 0.000004, (18: 0.000004, 2: 0.000004): 0.019236, 4: 0.000004, 30: 0.000004, 3: 0.000004, 6: 0.019299, 5: 0.000004, 19: 0.000004, 25: 0.000004, 23: 0.000004, 24: 0.009552, 9: 0.000004, 29: 0.000004, 28: 0.000004): 0.020126, (17: 0.038787, (26: 0.000004, 10: 0.000004, 15: 0.000004): 0.009439): 0.050304): 0.008727, 7: 0.000004): 0.000606, ((22: 0.000004, 27: 0.009602, 14: 0.019477): 0.029357, 21: 0.009654, 8: 0.009738, 1: 0.000004, 20: 0.009605): 0.009275);
(C65: 0.018867, (((C619: 0.000004, C295: 0.000004, C93: 0.000004, (C597: 0.000004, C627: 0.000004): 0.019236, C545: 0.000004, C224: 0.000004, C628: 0.000004, C389: 0.019299, C284: 0.000004, C315: 0.000004, C493: 0.000004, C381: 0.000004, C584: 0.009552, C561: 0.000004, C411: 0.000004, C596: 0.000004): 0.020126, (C196: 0.038787, (C337: 0.000004, C380: 0.000004, C165: 0.000004): 0.009439): 0.050304): 0.008727, C117: 0.000004): 0.000606, ((C208: 0.000004, C651: 0.009602, C68: 0.019477): 0.029357, C75: 0.009654, C60: 0.009738, C312: 0.000004, C129: 0.009605): 0.009275);
Detailed output identifying parameters
kappa (ts/tv) = 1.63580
Parameters in M7 (beta):
p = 0.01760 q = 0.05484
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00016 0.35858 0.99985 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.019 247.8 82.2 0.2359 0.0035 0.0148 0.9 1.2
31..32 0.001 247.8 82.2 0.2359 0.0001 0.0005 0.0 0.0
32..33 0.009 247.8 82.2 0.2359 0.0016 0.0068 0.4 0.6
33..34 0.020 247.8 82.2 0.2359 0.0037 0.0157 0.9 1.3
34..11 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..13 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..16 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..35 0.019 247.8 82.2 0.2359 0.0035 0.0150 0.9 1.2
35..18 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
35..2 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..4 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..30 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..3 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..6 0.019 247.8 82.2 0.2359 0.0036 0.0151 0.9 1.2
34..5 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..19 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..25 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..23 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..24 0.010 247.8 82.2 0.2359 0.0018 0.0075 0.4 0.6
34..9 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..29 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
34..28 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
33..36 0.050 247.8 82.2 0.2359 0.0093 0.0393 2.3 3.2
36..17 0.039 247.8 82.2 0.2359 0.0072 0.0303 1.8 2.5
36..37 0.009 247.8 82.2 0.2359 0.0017 0.0074 0.4 0.6
37..26 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
37..10 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
37..15 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
32..7 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
31..38 0.009 247.8 82.2 0.2359 0.0017 0.0073 0.4 0.6
38..39 0.029 247.8 82.2 0.2359 0.0054 0.0230 1.3 1.9
39..22 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
39..27 0.010 247.8 82.2 0.2359 0.0018 0.0075 0.4 0.6
39..14 0.019 247.8 82.2 0.2359 0.0036 0.0152 0.9 1.3
38..21 0.010 247.8 82.2 0.2359 0.0018 0.0076 0.4 0.6
38..8 0.010 247.8 82.2 0.2359 0.0018 0.0076 0.4 0.6
38..1 0.000 247.8 82.2 0.2359 0.0000 0.0000 0.0 0.0
38..20 0.010 247.8 82.2 0.2359 0.0018 0.0075 0.4 0.6
Time used: 13:45
Model 8: beta&w>1 (11 categories)
TREE # 1: (12, (((11, 13, 16, (18, 2), 4, 30, 3, 6, 5, 19, 25, 23, 24, 9, 29, 28), (17, (26, 10, 15))), 7), ((22, 27, 14), 21, 8, 1, 20)); MP score: 30
lnL(ntime: 38 np: 43): -632.915102 +0.000000
31..12 31..32 32..33 33..34 34..11 34..13 34..16 34..35 35..18 35..2 34..4 34..30 34..3 34..6 34..5 34..19 34..25 34..23 34..24 34..9 34..29 34..28 33..36 36..17 36..37 37..26 37..10 37..15 32..7 31..38 38..39 39..22 39..27 39..14 38..21 38..8 38..1 38..20
0.019483 0.000004 0.009056 0.020275 0.000004 0.000004 0.000004 0.019359 0.000004 0.000004 0.000004 0.000004 0.000004 0.019918 0.000004 0.000004 0.000004 0.000004 0.009609 0.000004 0.000004 0.000004 0.052236 0.039088 0.010234 0.000004 0.000004 0.000004 0.000004 0.009683 0.029744 0.000004 0.009697 0.019689 0.009727 0.010100 0.000004 0.009699 1.852336 0.975055 22.341114 99.000000 6.131776
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.297687
(12: 0.019483, (((11: 0.000004, 13: 0.000004, 16: 0.000004, (18: 0.000004, 2: 0.000004): 0.019359, 4: 0.000004, 30: 0.000004, 3: 0.000004, 6: 0.019918, 5: 0.000004, 19: 0.000004, 25: 0.000004, 23: 0.000004, 24: 0.009609, 9: 0.000004, 29: 0.000004, 28: 0.000004): 0.020275, (17: 0.039088, (26: 0.000004, 10: 0.000004, 15: 0.000004): 0.010234): 0.052236): 0.009056, 7: 0.000004): 0.000004, ((22: 0.000004, 27: 0.009697, 14: 0.019689): 0.029744, 21: 0.009727, 8: 0.010100, 1: 0.000004, 20: 0.009699): 0.009683);
(C65: 0.019483, (((C619: 0.000004, C295: 0.000004, C93: 0.000004, (C597: 0.000004, C627: 0.000004): 0.019359, C545: 0.000004, C224: 0.000004, C628: 0.000004, C389: 0.019918, C284: 0.000004, C315: 0.000004, C493: 0.000004, C381: 0.000004, C584: 0.009609, C561: 0.000004, C411: 0.000004, C596: 0.000004): 0.020275, (C196: 0.039088, (C337: 0.000004, C380: 0.000004, C165: 0.000004): 0.010234): 0.052236): 0.009056, C117: 0.000004): 0.000004, ((C208: 0.000004, C651: 0.009697, C68: 0.019689): 0.029744, C75: 0.009727, C60: 0.010100, C312: 0.000004, C129: 0.009699): 0.009683);
Detailed output identifying parameters
kappa (ts/tv) = 1.85234
Parameters in M8 (beta&w>1):
p0 = 0.97505 p = 22.34111 q = 99.00000
(p1 = 0.02495) w = 6.13178
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09751 0.09751 0.09751 0.09751 0.09751 0.09751 0.09751 0.09751 0.09751 0.09751 0.02495
w: 0.12957 0.14793 0.15951 0.16912 0.17800 0.18682 0.19616 0.20684 0.22059 0.24461 6.13178
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.019 246.0 84.0 0.3323 0.0043 0.0129 1.1 1.1
31..32 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
32..33 0.009 246.0 84.0 0.3323 0.0020 0.0060 0.5 0.5
33..34 0.020 246.0 84.0 0.3323 0.0045 0.0135 1.1 1.1
34..11 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..13 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..16 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..35 0.019 246.0 84.0 0.3323 0.0043 0.0128 1.1 1.1
35..18 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
35..2 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..4 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..30 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..3 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..6 0.020 246.0 84.0 0.3323 0.0044 0.0132 1.1 1.1
34..5 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..19 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..25 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..23 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..24 0.010 246.0 84.0 0.3323 0.0021 0.0064 0.5 0.5
34..9 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..29 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
34..28 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
33..36 0.052 246.0 84.0 0.3323 0.0115 0.0347 2.8 2.9
36..17 0.039 246.0 84.0 0.3323 0.0086 0.0259 2.1 2.2
36..37 0.010 246.0 84.0 0.3323 0.0023 0.0068 0.6 0.6
37..26 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
37..10 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
37..15 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
32..7 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
31..38 0.010 246.0 84.0 0.3323 0.0021 0.0064 0.5 0.5
38..39 0.030 246.0 84.0 0.3323 0.0066 0.0197 1.6 1.7
39..22 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
39..27 0.010 246.0 84.0 0.3323 0.0021 0.0064 0.5 0.5
39..14 0.020 246.0 84.0 0.3323 0.0043 0.0131 1.1 1.1
38..21 0.010 246.0 84.0 0.3323 0.0021 0.0065 0.5 0.5
38..8 0.010 246.0 84.0 0.3323 0.0022 0.0067 0.5 0.6
38..1 0.000 246.0 84.0 0.3323 0.0000 0.0000 0.0 0.0
38..20 0.010 246.0 84.0 0.3323 0.0021 0.0064 0.5 0.5
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C312)
Pr(w>1) post mean +- SE for w
10 F 0.999** 6.126
83 R 0.884 5.444
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C312)
Pr(w>1) post mean +- SE for w
10 F 0.968* 4.925 +- 2.494
83 R 0.815 4.313 +- 2.798
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.011 0.080 0.908
p : 0.358 0.339 0.180 0.076 0.029 0.011 0.004 0.002 0.001 0.000
q : 0.000 0.028 0.056 0.072 0.089 0.108 0.129 0.151 0.173 0.195
ws: 0.098 0.140 0.161 0.153 0.129 0.102 0.079 0.060 0.045 0.034
Time used: 26:40
Model 1: NearlyNeutral -634.901618 Model 2: PositiveSelection -632.908114 Model 7: beta -634.998253 Model 8: beta&w>1 -632.915102 Model 2 vs 1 3.987008 Model 8 vs 7 4.166302
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
