--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -20701.75 -20713.96
2 -20701.82 -20722.02
--------------------------------------
TOTAL -20701.79 -20721.33
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 4.351685 0.067332 3.835003 4.836499 4.339161 778.42 894.24 1.000
r(A<->C){all} 0.166626 0.000196 0.139306 0.192657 0.166200 835.91 872.40 1.001
r(A<->G){all} 0.334126 0.000333 0.298735 0.369340 0.333721 773.66 838.56 1.000
r(A<->T){all} 0.078489 0.000064 0.062328 0.093564 0.078183 888.21 966.51 1.001
r(C<->G){all} 0.100552 0.000154 0.076730 0.124932 0.100295 657.25 839.55 1.001
r(C<->T){all} 0.276275 0.000226 0.245061 0.303867 0.276503 823.92 837.46 1.000
r(G<->T){all} 0.043932 0.000047 0.030579 0.057025 0.043835 724.80 872.56 1.000
pi(A){all} 0.251961 0.000025 0.242275 0.261888 0.252037 610.68 842.07 1.000
pi(C){all} 0.175650 0.000018 0.167479 0.184059 0.175513 690.30 692.47 1.002
pi(G){all} 0.209884 0.000025 0.200788 0.219949 0.209854 770.11 825.26 1.000
pi(T){all} 0.362504 0.000033 0.351225 0.372841 0.362480 680.71 798.17 1.000
alpha{1,2} 0.214078 0.000175 0.188256 0.238779 0.213727 839.88 962.74 1.001
alpha{3} 4.470815 1.597938 2.338717 6.853983 4.232755 1103.30 1142.42 1.001
pinvar{all} 0.041776 0.000186 0.014794 0.067195 0.041903 1025.50 1081.60 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -19228.704470
Model 2: PositiveSelection -19228.704470
Model 7: beta -18952.545629
Model 8: beta&w>1 -18942.994265
Model 2 vs 1 0
Model 8 vs 7 19.102728
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
21 F 0.888 1.181
24 T 0.594 0.839
33 T 0.504 0.728
36 K 0.589 0.836
108 S 0.685 0.944
139 L 0.552 0.793
146 A 0.550 0.786
228 S 0.796 1.074
284 N 0.902 1.196
305 D 0.764 1.037
348 T 0.812 1.093
423 R 0.771 1.046
453 P 0.980* 1.286
484 S 0.592 0.833
487 S 0.761 1.034
551 S 0.718 0.984
582 N 0.522 0.754
595 S 0.672 0.931
607 V 0.819 1.101
610 S 0.573 0.805
655 I 0.942 1.243
656 A 0.784 1.060
672 D 0.830 1.113
768 S 0.666 0.922
788 A 0.530 0.765
1068 R 0.615 0.862
1120 S 0.875 1.166
1123 G 0.672 0.928
1141 I 0.835 1.120
1160 A 0.740 1.010
1163 K 0.617 0.864
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
21 F 0.576 1.300 +- 0.865
108 S 0.520 1.191 +- 0.910
228 S 0.597 1.320 +- 0.902
284 N 0.644 1.408 +- 0.878
305 D 0.503 1.184 +- 0.889
348 T 0.576 1.297 +- 0.902
423 R 0.549 1.246 +- 0.892
453 P 0.880 1.774 +- 0.810
484 S 0.587 1.307 +- 1.006
487 S 0.561 1.267 +- 0.909
551 S 0.522 1.205 +- 0.905
607 V 0.562 1.266 +- 0.877
610 S 0.607 1.311 +- 1.046
655 I 0.665 1.446 +- 0.876
656 A 0.565 1.277 +- 0.906
672 D 0.618 1.362 +- 0.903
768 S 0.506 1.167 +- 0.912
1120 S 0.528 1.227 +- 0.865
1141 I 0.559 1.274 +- 0.886
1160 A 0.514 1.190 +- 0.889
-- Starting log on Wed Oct 26 00:49:04 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.09 sec, SCORE=1000, Nseq=10, Len=1296
C1 MLLILVLGVSLAAASRPECFN-PRFTLTPLNHTLNYTSIKAKVSNVLLPD
C2 -MLVILLILPLVSA-RPSCVT--IENLSYVAHNFTHVSFSMSKVSRIFPD
C3 MLLIAFILLPVVTASRPFCLGRDFDVSRVLPHNISTGSFVVNKLSTLLPD
C4 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPD
C5 MLLILVLGVSLAAASRPECFN-PRFTLTPLNHTLNYTSIKAKVSNVLLPD
C6 -MFLIFLLLSQVNADRPSCFS-SPDLTTTKQHIISNVSFYVQVKNLLLPD
C7 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPD
C8 -MLVILLMLPLVFA-RPSCVT--ISNLQYVDHNYTHRSFDMSAVSRVFPD
C9 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPD
C10 -MLVILLMLPLVFA-RPSCVT--ISNLQYVDHNYTHRSFDMSAVSRVFPD
::: .: :. . * ** *. * . *: . . :.**
C1 PYIAYSGQTLRQNLFMADMSNTILYPVTPPANGANGGFIYNTSIIPVSAG
C2 PFVAYSGQTLRQSLYIADTSNTTVYPITPPPVGGNPG-IYNLTTLPVNEG
C3 PYIAYSGQTVRQTLFVANATDTTIYPITPYKEGDRAY-YYNTSLYLVSQG
C4 PYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDG
C5 PYIAYSGQTLRQNLFMADMSNTILYPVTPPANGANGGFIYNTSIIPVSAG
C6 PYIAYSGQVLKQHLPTADLSNVIKYPITPDLVDATKGYVFNTTILPVDLG
C7 PYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDG
C8 PFVAYSGQTLKQSLYIADTSNTTVYPVTPPAVNGKPG-IYNLTILPVGDG
C9 PYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDG
C10 PFVAYSGQTLKQSLYLADTSNTTVYPVTPPAVNGKPG-IYNLTILPVGDG
*::*****.::* * *: ::. **:** :* : *. *
C1 LFVNTWMYRQPASSRAYCQEPFGVAFGDTFENDRIAILIMAPDNLGSWSA
C2 FLVHTFMYRDQPVD-MYCQEPFGVAFGTTFQNDLIAIVMIVPGQYGSWAE
C3 FFVHSYMFKNQIEG-LYCQQPFGVVFGNTFEQDRIAIVIIAPDVYGRWIT
C4 LFVHTYMYLNQPSN-MYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTA
C5 LFVNTWMYRQPASSRAYCQEPFGVAFGDTFENDRIAILIMAPDNLGSWSA
C6 VFVHTWMYRQPSSSNLYCQQPFGVAFGNTFVEDRIAVIVIAPDNLGSWVH
C7 LFVHTYMYLNQPSN-MYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTA
C8 FLVQTYMYKDQPSD-TYCQEPFGVAFGTTFEYDRIAIVTIVPGYKGSWSA
C9 LFVHTYMYLNQPSN-MYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTA
C10 FLVQTYMYKDQPSD-TYCQEPFGVAFGTTFEYDRIAIVTIVPGYKGSWSA
.:*:::*: : . ***:****.** ** * **:: :.*. * *
C1 VAPRNQTNIYLLVCSNATLCINPGFNRWGPAGSFIAPDALVDHSNSCFVN
C2 VKRQNTTNVHILVCGNATLCQYPAFNRWGPAGSIYSSDAFTTYGESCFIN
C3 ATPRSYTNVTILVCSNATICANPAFNRWGPAGDYLANNAFTEHDDSCFIN
C4 ASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVN
C5 VAPRNQTNIYLLVCSNATLCINPGFNRWGPAGSFIAPDALVDHSNSCFVN
C6 SSPRDQTTVHILVCSNATLCANPGFNRWGPAGNILVRNPLVEHDNSCFVN
C7 ASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVN
C8 VQKQTTTNVNILVCSNATLCAYPAFNRWGPAGTIYTTNDFVVYGDSCFIN
C9 ASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVN
C10 VQKQTTTNVNILVCSNATLCAYPAFNRWGPAGTIYTTNDFVVYGDSCFIN
: *.: :***.***:* *.*******. : :. :.:***:*
C1 NTFSVNISTSRISLAFLFKDGDLLIYHSGWLPTSNFEHGFSRGSHPMTYF
C2 NTFSINLNTSRLNLGFRFSDGNLYIYHSSWLPISGLNLM---LDYPLHYY
C3 NTMRIPYNTSRINLAFRFQDGNLLIYYSDWLPHGSLDLS---APWPLNFY
C4 NSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA---TDYPLHFF
C5 NTFSVNISTSRISLAFLFKDGDLLIYHSGWLPTSNFEHGFSRGSHPMTYF
C6 NSFNIPLSTARLNLAFLFKDGNLLVYHSPWLPHGDFNVN---GTYPLTYF
C7 NSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA---TDYPLHFF
C8 NTFTISINTSRLNLGFRFNDGNLYLYHSKWLPMQGLNLM---VDYPLHFL
C9 NSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA---TDYPLHFF
C10 NTFTISINTSRLNLGFRFNDGNLYLYHSKWLPMQGLNLM---VDYPLHFL
*:: : .*:*:.*.* * **:* :*:* *** .:: *: :
C1 MSLPVGGNLPRAQFFQSIVRSN-----AIDKGDGMCTNFDVNLHVAHLIN
C2 MSVGVGSNLPNMQFFQSVSRKGTPPAQGANNNDGSCLAFQNNLYLAYVTR
C3 TSVAVGGNLKYAQFFQSVVRNYNTPTQSLT--DGNCVGDLVNLYVAPLVK
C4 MSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSL
C5 MSLPVGGNLPRAQFFQSIVRSN-----AIDKGDGMCTNFDVNLHVAHLIN
C6 MTLPVGSNLRHAQYFQSVVRND----YAVA--DGKCRDFDLNLYIAPIVY
C7 MSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSL
C8 MSVGVGANLPNMQFYQAVVRQGTPPVTGADKNDANCLAFQNNLYLAYISK
C9 MSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSL
C10 MSVGVGANLPNMQFYQAVVRQGTPPVTGAYKNDANCLAFQNNLYLAYISK
:: **.** *::*:: * . :. * **::* :
C1 RDLLVSYFNNGSVANAADCADSAAEELYCVTGSFDPPTGVYPLSRYRAQV
C2 RELLVSYDDNGFPTAVADCSYDAGDELYCVTGSFTPQVGVYPLSRYRAQV
C3 RELLVQYSLAGRPINVADCALDSGEELYCVTGTFTPDAGVYSLSRYRAQT
C4 REVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQV
C5 RDLLVSYFNNGSVANAADCADSAAEELYCVTGSFDPPTGVYPLSRYRAQV
C6 KELLVQYSINGSVENAAECANSASDELYCVTGTFEPQTGVYALSRYRAQV
C7 REVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQV
C8 RDLLVSYDDNGLPIAVADCSQNAGDELYCVTGTFSPQVGVYPLSRYRALV
C9 REVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQV
C10 RDLLVSYDDNGLPIAVADCSQNAGDELYCVTGTFSPQVGVYPLSRYRALV
:::**.* * .*:*: .:.:**:****:* * ***.****** .
C1 AGFVRVTQRGSYCTPPYSVLQDPPQPVVWRRYMLYDCVFDFTVVVDSLPT
C2 SGYVQITQQGDTCVLPYSDIVRPPQPVVWRRYTVTSCSFDFEAIVNRLPT
C3 VGHVSITQQFETCDIPYAALQTPPQPIAWRRYAVSKCGFDFEAVINRLPT
C4 SDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPT
C5 AGFVRVTQRGSYCTPPYSVLQDPPQPVVWRRYMLYDCVFDFTVVVDSLPT
C6 QGFVRITQQADVCQPPYAALENPPQPVVWRRYLVRDCAFDFATVINNLPT
C7 SDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPT
C8 SDYVQISQQGSICSLPYSDILKPPQPIVWKRHTVTNCSFDFDAIVNRLPT
C9 SDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPT
C10 SDYVQISQQGSICSLPYSDILKPPQPIVWKRHTVTNCSFDFDAIVNRLPT
..* ::*: . * **: : ****:.*:*: : .* *** ::: ***
C1 HQLQCYGVSPRRLASMCYGSVTLDVMRINETHLNNLFNRVPDTFSLYNYA
C2 FELKCFGISPARLAQMCYSSVTLDLFRANTTHLANMLGGVPDLFSKYNYA
C3 FELKCFGVSPARLASMCYGKVTIDVFRINVTHLANLIAGVPDAFSKYNYA
C4 YDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYA
C5 HQLQCYGVSPRRLASMCYGSVTLDVMRINETHLNNLFNRVPDTFSLYNYA
C6 YQLHCYGVSPSRLASMCYNTITIDVMRINTTHLNNLLQKVPDAFSLYNYA
C7 YDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYA
C8 FQLKCFGVSPAKLAQMCYSSVTLDIFRANTTHLANMLGKVPDVFSKYNYA
C9 YDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYA
C10 FQLKCFGVSPAKLAQMCYSSVTLDIFRANTTHLANMLGKVPDVFSKYNYA
.:*:*:*:** :**.*** :*:*::* * ** *:: *** *: ****
C1 LPDNFYGCLHAFYLNSTAP-YAVANRFP---IKPGGRQSNSAFIDTVINA
C2 LPSNFYGCVHAYYINDTNKDYAIAQRWPATPITPGGRQPYSDYVRTVLNT
C3 LPRDFYGCVHAFYVNMSSD-YIIADSWPAVVIQPGGRQTDSSLVGTWLNS
C4 LPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNT
C5 LPDNFYGCLHAFYLNSTAP-YAVANRFP---IKPGGRQSNSAFIDTVINA
C6 IPSDFYGCIHAYYLNVTDT-YAIATQRR---ISPGGRQDDSFYINTVLGA
C7 LPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNT
C8 LPPDFYGCVHSYYINDSSRMYAIAQQWPATVIAPGGRQPYNSYVGTVLNT
C9 LPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNT
C10 LPPDFYGCVHSYYINDTSPMYAIAQQWPATVIAPGGRQPYNSYVGTVLNT
:* :****:*::*:* : * :* * ***** . : * :.:
C1 A-HYSPFSYV-YGLAVITLKPAAGSKLVCPVANDTVVITDRCVQYNLYGY
C2 P-NPSCTTLTCFGVVVISLKPASGRKLVCPSVNDTDMRTNECVKYNLYGY
C3 PAKSHCTILSCFGVAVIGLQPASGTQLVCPKQNDTTLIEDQCVTYNVYGY
C4 V-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGY
C5 A-HYSPFSYV-YGLAVITLKPAAGSKLVCPVANDTVVITDRCVQYNLYGY
C6 A-QYSGFNTLLYGLSVISLTPASGNKLVCPIANDTAVVTNQCVQYNLYGY
C7 V-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGY
C8 P-NPTCTQLTCFGVVVISLKPASGKHLVCPSANDTDLVTRECVKYNLYGY
C9 V-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGY
C10 P-NPKCTQLTCFGVVVISLKPASGKHLVCPSANDTDLVTRECVKYNLYGY
: :*: ** * **:* :**** *** : .** **:***
C1 TGTGVLSKNTSLVIPDGKVFTASSTGTIIGVSINSTTYSIMPCVTVPVSV
C2 TGTGVFN-VSTLTIPDSKLFVANGAGDIIAASVKGTVYSITPCVSVPVSV
C3 TGTGVFT-TSNLTIPDNKLFSASATGAISAVSIHNAVYAISPCVSVPVSV
C4 TGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSV
C5 TGTGVLSKNTSLVIPDGKVFTASSTGTIIGVSINSTTYSIMPCVTVPVSV
C6 TGTGVLNATTAISIPSDKVFSASDTGDIVAVRVNGTVYTIRPCVSVPISV
C7 TGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSV
C8 TGTGVFN-ESSLVIPDSKLFVASSTGDIIAAKVRGKVYSITPCVSVPISV
C9 TGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSV
C10 TGTGVFN-ESSLVIPDSKLFVASSTGDIIAAKVRGKVYSITPCVSVPISV
*****:. : : **..*:* *. :* * .. . .* * .**:**:**
C1 GYHPNFERALLFNGLSCSQRSRAVTEPVSVLWSA-----SATAQDAFDTP
C2 GYDPNFERALLFNGLACKERAVAVSMPASLFWRTVVQDNITNSVTTFDTL
C3 GFSPNFDKVLLFNGLACKERAVAVSIPASDYWMRV---RSSENDTIFDTE
C4 GYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTP
C5 GYHPNFERALLFNGLSCSQRSRAVTEPVSVLWSA-----SATAQDAFDTP
C6 GYHAGYERALLFNGLSCADRTSAITMPASTYWSTA---RAQSASNYYDTI
C7 GYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTP
C8 GYDPSFERALLFNGLSCSERSVAVSLPASDYWLAAVADNASTGVVTFDTL
C9 GYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTP
C10 GYDPSFERALLFNGLSCSERSVAVSLPASDYWVAAVADNASTGVVTFDTL
*: ..:::.******:* :*: *:. *.* * :**
C1 SGCVVNVELRNTTIVNTCAMPIGNSLCFINGSIAT----ANADSLPRLQL
C2 SGCVYNVYNATNIVVQSCSMPLGNSLCLANLTTST---VSVSRAGNLLSL
C3 SGCVYNAHNRTDLVVNECSLPLGNSLCLINDTAST-----RREASNLLTL
C4 SGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSL
C5 SGCVVNVELRNTTIVNTCAMPIGNSLCFINGSIAT----ANADSLPRLQL
C6 SGCVYNVDYNNATTVNQCVMPLGNSLCLVPNTQRV--------AGSRLTL
C7 SGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSL
C8 SGCVHNVRNATDITVPTCLMPLGNSLCLANITQPSQYGLSTTSSVNLLSL
C9 SGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSL
C10 SGCVHNVRNATDITVPTCLMPLGNSLCLANITQPSQYGLSTTSSVNLLSL
**** *. . * * :*:*****: : : * *
C1 VNYDPLYDNSTATPMTPVYWVKVPTNFTLSATEEYIQTTAPKITIDCARY
C2 VTYDPTAIAG-VKVMTPVYWISIPTNFTLGAVSEYIQTTSPKINVDCVKY
C3 VSFQPGIIAS-VKVLTPVYWVRVPTNFTLTATTEFIETTAPKITIDCARY
C4 VTYDPTAANA-VQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKY
C5 VNYDPLYDNSTATPMTPVYWVKVPTNFTLSATEEYIQTTAPKITIDCARY
C6 VNFDPMYVSDSVTSLTPIYWVNIPTNFTLAATEEFIQTTAPKMNIDCARY
C7 VTYDPTAANA-VQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKY
C8 VTYDPTFQGG-VKVMSPVYWISIPTNFTLGAITEYIQTTSPKVNVDCVKY
C9 VTYDPTAANA-VQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKY
C10 VTYDPTFQGG-VKVMSPVYWISIPTNFTLGAITEYIQTTSPKVNVDCVKY
*.::* . ::*:**: :****** * *:*:*::**:.:**.:*
C1 LCGDSSRCLNVLLHYGTFCNDINKALSRVSTILDSALLSLVKELSINTRD
C2 LCGDSERCTTVLLQYGTFCNDVNKALSEVSAIIDASMVSLVSEITADVVR
C3 LCGDSSRCLAVLEQYGTFCDDVNTALQRVNTMLDAAVVSLTSQLVSDIVP
C4 LCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVR
C5 LCGDSSRCLNVLLHYGTFCNDINKALSRVSTILDSALLSLVKELSINTRD
C6 LCGDSSRCLTVSLQYGTFCDDINKALLRVSQLLDTSLLALFKEFSTNVRP
C7 LCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVR
C8 LCGDSERCTTVLLQYGTFCDDVNKALSEVSSIIDASMISLVSEITADVVR
C9 LCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVR
C10 LCGDSERCTTVLLQYGTFCDDVNKALSEVSSIIDASMISLVSEITADVVR
*****.** * :*****:*:*.** .*. :*:::::* .:: :
C1 EVTTFSFDGDYNFTGLMGCLGPNCGAT-TYRSAFSDLLYDKVRITDPGFM
C2 S-ENAHFDTTYNFTGLLGCVGSSCSST--YRSALSDLLYNKVKVTDPGFM
C3 T-ENSNFDSTYNFTALMGCLGSSCNSK---RSAISDLLYNKVKIADPGFM
C4 N-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYNKVKVTDPGFM
C5 EVTTFSFDGDYNFTGLMGCLGPNCGAT-TYRSAFSDLLYDKVRITDPGFM
C6 E-AELSLDGAYNFTGLMGCLGSNCGGK-SHRSALSELLYNKVKVADPGFM
C7 N-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYNKVKVTDPGFM
C8 S-ENALFDTTYNFTGLLGCVGSNCNDRTTYRSALSDLLYNKVKVTDPGFM
C9 N-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYNKVKVTDPGFM
C10 S-ENALFDTTYNFTGLLGCVGSNCNDRTTYRSALSDLLYNKVKVTDPGFM
:* ****.*:**:*..*. ***:*:***:**:::*****
C1 QSYQKCIDSQWGGSIRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAV
C2 SSYQKCI-SQWGGDVRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAV
C3 DSYQKCIDSQWGGNIRDLICTQVFNGIAVLPPIVSPGMQALYTSLLVGAV
C4 QSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAV
C5 QSYQKCIDSQWGGSIRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAV
C6 SSYQKCIDSQWGGEVRDLICTQTYNGISVLPPIVAPGMQALYTSLLVGAV
C7 QSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAV
C8 SSYQKCI-SQWGGDIRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAV
C9 QSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAV
C10 SSYQKCI-SQWGGDIRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAV
.****** *****.:***:*** :***:******:*.*************
C1 ASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNAL
C2 ASAGFTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKAL
C3 ASSGYTFGITSVGVIPFATQLQFRLNGIGVTTQVLVDNQKLIASSFNNAL
C4 ASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNAL
C5 ASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNAL
C6 ASSGYTFGITSVGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNKAL
C7 ASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNAL
C8 ASAGYTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKAL
C9 ASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNAL
C10 ASAGYTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKAL
**:*:***:**.**:************:********:**:***.***:**
C1 VNIQKGFTETSIALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIF
C2 VSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIF
C3 NQIQKGFDATNSALSKIQAVINQHATQLQTLVLQLGNTFGAISSSINIIF
C4 TNIQKGFDATNEAISKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIF
C5 VNIQKGFTETSIALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIF
C6 TSIQEGFTATNQALAKMQAVINQHASQLQTLVIQLGNSFGAISSSLNEIF
C7 TNIQKGFDATNEALSKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIF
C8 VSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIF
C9 TNIQKGFDATNEALSKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIF
C10 VSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIF
.**:** *. *::*:* ****** **:*** ****:*****:*:* **
C1 SRLEGLAANAEVDRLINGRMMVLNTYVTQLLIQASEAKAQNALAAQKISE
C2 SRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVRAQALLAKQKISE
C3 SRLEGLEADAEVDRLISGRMVVLNTYVTQLLVQASRIKAQSDLALQKINE
C4 SRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISE
C5 SRLEGLAANAEVDRLINGRMMVLNTYVTQLLIQASEAKAQNALAAQKISE
C6 SRLEGLAADAEVDRLINGRMVVLNTYVTQLLIQASELRAQNQLAVQKISE
C7 SRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISE
C8 SRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVKSQALLAKQKISE
C9 SRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISE
C10 SRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVKSQALLAKQKISE
***:** *:*:*****.** :**********::*:. ::* ** ***.*
C1 CVKAQSLRNDFCGNGTHVLSIPQLAPNGVLFIHYAYTPTEYAFVQTSAGL
C2 CVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTAYAVVQTAAGL
C3 CVKSQTLRNEFCGNGTHVLSVPQLAPNGIMFIHYSYTPTQYATVQTAAGL
C4 CVKAQSLRNDFCGNGTHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGL
C5 CVKAQSLRNDFCGNGTHVLSIPQLAPNGVLFIHYAYTPTEYAFVQTSAGL
C6 CVKAQSSRNDFCGNGTHVLSIPQLAPNGVLFIHYTYRPTEYAYVQTSAGL
C7 CVKAQSLRNDFCGNGIHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGL
C8 CVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTSYALVQTAAGL
C9 CVKAQSLRNDFCGNGTHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGL
C10 CVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTSYALVQTAAGL
***:*: **:***** **:*:*******::*:**:* ** :* ***:***
C1 CHNGTGYAPRQGMFVLPNNTNMWHFTTMQFYNPVNISASNTQVLTSCSVN
C2 CFNNTGYAPVGGLFVLPNDSIYWHFTKLNFYNPVNLSNSNTQVLTTCSVN
C3 CFNGTGYAPRNGLFILPNNSNFWYFTQANFYNPVNISNSNTQVLESCSVN
C4 CYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLN
C5 CHNGTGYAPRQGMFVLPNNTNMWHFTTMQFYNPVNISASNTQVLTSCSVN
C6 CYNKTGYAPKGGMFVLPNNTNLWHFTAMNFYNPVNITVFNTQILTSCSLN
C7 CYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLN
C8 CLNNTGYAPRDGLFVLPNGSIYWQFTKMNFYNPVRLTNSNTQVLTTCSVN
C9 CYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLN
C10 CLNNTGYAPRDGLFVLPNGSIYWQFTKMNFYNPVRLTNSNTQVLTTCSVN
* * ***** *:*:***.: * ** :***** :: ***:* :*.:*
C1 YTSVNYTVLEPSVPGDYDFQKEFDKFYKNLSTIFNNTFNPNDFNFSTVDV
C2 YTAVNYTVLDPVVNSDFNFTAEFDKWYKNHSSYFNNTFNPGDFNFSTVDI
C3 YTTVNYTILSPQEPLYNNFDEEFNKFYKNLSSVFNNTFNPGAFNFSTVEL
C4 YSHVNYTVVNPSVPSDFDFEEEFNKWYKNHTSIFNNTFDPSAFNFSMVDV
C5 YTSVNYTVLEPSVPGDYDFQKEFDKFYKNLSTIFNNTFNPNDFNFSTVDV
C6 FTAVNYTVLEPLQYSDFDFDAQFEKFYKNISSHFNNTFDPNQFNFSTVDV
C7 YSHVNYTVVNPSVPSDFDFEEEFNKWYKNHSSIFNNTFDPSAFNFSMVDV
C8 YTTVNYTVLPPTDNMDFNFTAEFEKWYKNHSSQFNNTFNPGDFNFSTVDI
C9 YSHVNYTVVNPSVPSDFDFEEEFNKWYKNHSSIFNNTFDPSAFNFSMVDV
C10 YTTVNYTVLPPTDNMDFNFTAEFEKWYKNHSSQFNNTFNPGDFNFSTVDI
:: ****:: * :* :*:*:*** :: *****:*. **** *::
C1 TAQIKSLHDVVNQLNQSFIDLKKLNVYEKTIKWPWYVWLAMIAGIVGLVL
C2 ERELSTLTEVVRQLNESFIDLKKLNVYEQTIKWPWYVWLAMIAGLVGLAL
C3 QSEIATLNEVVQQLNKSFIDLKQMNVYEQTIKWPWYVWLAMIAGLVGLAL
C4 NKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLAL
C5 TAQIKSLHDVVNQLNQSFIDLKKLNVYEKTIKWPWYVWLAMIAGIVGLVL
C6 KEQLDTLTNVVKQLNESVIDLKQMNVYEQTIKWPWYVWLAMIAGIVGLVL
C7 NKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLAL
C8 QNELNTLNAVVKQLNESFIDLKKLNVYEQTIKWPWYIWLAMIAGLVGLAL
C9 NKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLAL
C10 QNELNTLNAVVKQLNESFIDLKKLNVYEQTIKWPWYIWLAMIAGLVGLAL
:: :* **.***:* ****::****:*******:*******:***.*
C1 AVIMLMCMTNCCSCFKGMCDCRRCCGSYDSYDDVYPAVRVNKKRTV
C2 AVVMLLCMTNCCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
C3 AVVMLLCMTNCCSCFKGMCSCRHC--YYDEIEDVYPAVRVHNKRTA
C4 AVVMLLCMTNCCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA
C5 AVIMLMCMTNCCSCFKGMCDCRRCCGSYDSYDDVYPAVRVNKKRTV
C6 AVVMLLCMTNCCSCFKGMCSCKQC--YYDELDDVYPAVRVHNKRTA
C7 AVVMLLCMTNCCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA
C8 AVVMLLCMTNCCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
C9 AVVMLLCMTNCCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA
C10 AVVMLLCMTNCCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
**:**:************* *: * **. :******** :***.
-- Starting log on Wed Oct 26 00:49:46 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.30 sec, SCORE=977, Nseq=10, Len=1296
C1 MLLILVLGVSLAAASRPECFN-PRFTLTPLNHTLNYTSIKAKVSNVLLPD
C2 -MLVILLILPLVSA-RPSCVT--IENLSYVAHNFTHVSFSMSKVSRIFPD
C3 MLLIAFILLPVVTASRPFCLGRDFDVSRVLPHNISTGSFVVNKLSTLLPD
C4 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPD
C5 MLLILVLGVSLAAASRPECFN-PRFTLTPLNHTLNYTSIKAKVSNVLLPD
C6 -MFLIFLLLSQVNADRPSCFS-SPDLTTTKQHIISNVSFYVQVKNLLLPD
C7 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPD
C8 -MLVILLMLPLVFA-RPSCVT--ISNLQYVDHNYTHRSFDMSAVSRVFPD
C9 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPD
C10 -MLVILLMLPLVFA-RPSCVT--ISNLQYVDHNYTHRSFDMSAVSRVFPD
::: .: :. . * ** *. * . *: . . :.**
C1 PYIAYSGQTLRQNLFMADMSNTILYPVTPPANGANGGFIYNTSIIPVSAG
C2 PFVAYSGQTLRQSLYIADTSNTTVYPITPPPVGGNPG-IYNLTTLPVNEG
C3 PYIAYSGQTVRQTLFVANATDTTIYPITPYKEGDRAY-YYNTSLYLVSQG
C4 PYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDG
C5 PYIAYSGQTLRQNLFMADMSNTILYPVTPPANGANGGFIYNTSIIPVSAG
C6 PYIAYSGQVLKQHLPTADLSNVIKYPITPDLVDATKGYVFNTTILPVDLG
C7 PYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDG
C8 PFVAYSGQTLKQSLYIADTSNTTVYPVTPPAVNGKPG-IYNLTILPVGDG
C9 PYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDG
C10 PFVAYSGQTLKQSLYLADTSNTTVYPVTPPAVNGKPG-IYNLTILPVGDG
*::*****.::* * *: ::. **:** :* : *. *
C1 LFVNTWMYRQPASSRAYCQEPFGVAFGDTFENDRIAILIMAPDNLGSWSA
C2 FLVHTFMYRDQPVD-MYCQEPFGVAFGTTFQNDLIAIVMIVPGQYGSWAE
C3 FFVHSYMFKNQIEG-LYCQQPFGVVFGNTFEQDRIAIVIIAPDVYGRWIT
C4 LFVHTYMYLNQPSN-MYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTA
C5 LFVNTWMYRQPASSRAYCQEPFGVAFGDTFENDRIAILIMAPDNLGSWSA
C6 VFVHTWMYRQPSSSNLYCQQPFGVAFGNTFVEDRIAVIVIAPDNLGSWVH
C7 LFVHTYMYLNQPSN-MYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTA
C8 FLVQTYMYKDQPSD-TYCQEPFGVAFGTTFEYDRIAIVTIVPGYKGSWSA
C9 LFVHTYMYLNQPSN-MYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTA
C10 FLVQTYMYKDQPSD-TYCQEPFGVAFGTTFEYDRIAIVTIVPGYKGSWSA
.:*:::*: : . ***:****.** ** * **:: :.*. * *
C1 VAPRNQTNIYLLVCSNATLCINPGFNRWGPAGSFIAPDALVDHSNSCFVN
C2 VKRQNTTNVHILVCGNATLCQYPAFNRWGPAGSIYSSDAFTTYGESCFIN
C3 ATPRSYTNVTILVCSNATICANPAFNRWGPAGDYLANNAFTEHDDSCFIN
C4 ASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVN
C5 VAPRNQTNIYLLVCSNATLCINPGFNRWGPAGSFIAPDALVDHSNSCFVN
C6 SSPRDQTTVHILVCSNATLCANPGFNRWGPAGNILVRNPLVEHDNSCFVN
C7 ASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVN
C8 VQKQTTTNVNILVCSNATLCAYPAFNRWGPAGTIYTTNDFVVYGDSCFIN
C9 ASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVN
C10 VQKQTTTNVNILVCSNATLCAYPAFNRWGPAGTIYTTNDFVVYGDSCFIN
: *.: :***.***:* *.*******. : :. :.:***:*
C1 NTFSVNISTSRISLAFLFKDGDLLIYHSGWLPTSNFEHGFSRGSHPMTYF
C2 NTFSINLNTSRLNLGFRFSDGNLYIYHSSWLPISGLNLM---LDYPLHYY
C3 NTMRIPYNTSRINLAFRFQDGNLLIYYSDWLPHGSLDLS---APWPLNFY
C4 NSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA---TDYPLHFF
C5 NTFSVNISTSRISLAFLFKDGDLLIYHSGWLPTSNFEHGFSRGSHPMTYF
C6 NSFNIPLSTARLNLAFLFKDGNLLVYHSPWLPHGDFNVN---GTYPLTYF
C7 NSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA---TDYPLHFF
C8 NTFTISINTSRLNLGFRFNDGNLYLYHSKWLPMQGLNLM---VDYPLHFL
C9 NSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA---TDYPLHFF
C10 NTFTISINTSRLNLGFRFNDGNLYLYHSKWLPMQGLNLM---VDYPLHFL
*:: : .*:*:.*.* * **:* :*:* *** .:: *: :
C1 MSLPVGGNLPRAQFFQSIVRSN-----AIDKGDGMCTNFDVNLHVAHLIN
C2 MSVGVGSNLPNMQFFQSVSRKGTPPAQGANNNDGSCLAFQNNLYLAYVTR
C3 TSVAVGGNLKYAQFFQSVVRNYNTPTQSLT--DGNCVGDLVNLYVAPLVK
C4 MSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSL
C5 MSLPVGGNLPRAQFFQSIVRSN-----AIDKGDGMCTNFDVNLHVAHLIN
C6 MTLPVGSNLRHAQYFQSVVRND----YAVA--DGKCRDFDLNLYIAPIVY
C7 MSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSL
C8 MSVGVGANLPNMQFYQAVVRQGTPPVTGADKNDANCLAFQNNLYLAYISK
C9 MSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSL
C10 MSVGVGANLPNMQFYQAVVRQGTPPVTGAYKNDANCLAFQNNLYLAYISK
:: **.** *::*:: * . :. * **::* :
C1 RDLLVSYFNNGSVANAADCADSAAEELYCVTGSFDPPTGVYPLSRYRAQV
C2 RELLVSYDDNGFPTAVADCSYDAGDELYCVTGSFTPQVGVYPLSRYRAQV
C3 RELLVQYSLAGRPINVADCALDSGEELYCVTGTFTPDAGVYSLSRYRAQT
C4 REVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQV
C5 RDLLVSYFNNGSVANAADCADSAAEELYCVTGSFDPPTGVYPLSRYRAQV
C6 KELLVQYSINGSVENAAECANSASDELYCVTGTFEPQTGVYALSRYRAQV
C7 REVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQV
C8 RDLLVSYDDNGLPIAVADCSQNAGDELYCVTGTFSPQVGVYPLSRYRALV
C9 REVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQV
C10 RDLLVSYDDNGLPIAVADCSQNAGDELYCVTGTFSPQVGVYPLSRYRALV
:::**.* * .*:*: .:.:**:****:* * ***.****** .
C1 AGFVRVTQRGSYCTPPYSVLQDPPQPVVWRRYMLYDCVFDFTVVVDSLPT
C2 SGYVQITQQGDTCVLPYSDIVRPPQPVVWRRYTVTSCSFDFEAIVNRLPT
C3 VGHVSITQQFETCDIPYAALQTPPQPIAWRRYAVSKCGFDFEAVINRLPT
C4 SDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPT
C5 AGFVRVTQRGSYCTPPYSVLQDPPQPVVWRRYMLYDCVFDFTVVVDSLPT
C6 QGFVRITQQADVCQPPYAALENPPQPVVWRRYLVRDCAFDFATVINNLPT
C7 SDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPT
C8 SDYVQISQQGSICSLPYSDILKPPQPIVWKRHTVTNCSFDFDAIVNRLPT
C9 SDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPT
C10 SDYVQISQQGSICSLPYSDILKPPQPIVWKRHTVTNCSFDFDAIVNRLPT
..* ::*: . * **: : ****:.*:*: : .* *** ::: ***
C1 HQLQCYGVSPRRLASMCYGSVTLDVMRINETHLNNLFNRVPDTFSLYNYA
C2 FELKCFGISPARLAQMCYSSVTLDLFRANTTHLANMLGGVPDLFSKYNYA
C3 FELKCFGVSPARLASMCYGKVTIDVFRINVTHLANLIAGVPDAFSKYNYA
C4 YDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYA
C5 HQLQCYGVSPRRLASMCYGSVTLDVMRINETHLNNLFNRVPDTFSLYNYA
C6 YQLHCYGVSPSRLASMCYNTITIDVMRINTTHLNNLLQKVPDAFSLYNYA
C7 YDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYA
C8 FQLKCFGVSPAKLAQMCYSSVTLDIFRANTTHLANMLGKVPDVFSKYNYA
C9 YDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYA
C10 FQLKCFGVSPAKLAQMCYSSVTLDIFRANTTHLANMLGKVPDVFSKYNYA
.:*:*:*:** :**.*** :*:*::* * ** *:: *** *: ****
C1 LPDNFYGCLHAFYLNSTAP-YAVANRFP---IKPGGRQSNSAFIDTVINA
C2 LPSNFYGCVHAYYINDTNKDYAIAQRWPATPITPGGRQPYSDYVRTVLNT
C3 LPRDFYGCVHAFYVNMSSD-YIIADSWPAVVIQPGGRQTDSSLVGTWLNS
C4 LPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNT
C5 LPDNFYGCLHAFYLNSTAP-YAVANRFP---IKPGGRQSNSAFIDTVINA
C6 IPSDFYGCIHAYYLNVTDT-YAIATQRR---ISPGGRQDDSFYINTVLGA
C7 LPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNT
C8 LPPDFYGCVHSYYINDSSRMYAIAQQWPATVIAPGGRQPYNSYVGTVLNT
C9 LPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNT
C10 LPPDFYGCVHSYYINDTSPMYAIAQQWPATVIAPGGRQPYNSYVGTVLNT
:* :****:*::*:* : * :* * ***** . : * :.:
C1 A-HYSPFSYV-YGLAVITLKPAAGSKLVCPVANDTVVITDRCVQYNLYGY
C2 P-NPSCTTLTCFGVVVISLKPASGRKLVCPSVNDTDMRTNECVKYNLYGY
C3 PAKSHCTILSCFGVAVIGLQPASGTQLVCPKQNDTTLIEDQCVTYNVYGY
C4 V-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGY
C5 A-HYSPFSYV-YGLAVITLKPAAGSKLVCPVANDTVVITDRCVQYNLYGY
C6 A-QYSGFNTLLYGLSVISLTPASGNKLVCPIANDTAVVTNQCVQYNLYGY
C7 V-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGY
C8 P-NPTCTQLTCFGVVVISLKPASGKHLVCPSANDTDLVTRECVKYNLYGY
C9 V-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGY
C10 P-NPKCTQLTCFGVVVISLKPASGKHLVCPSANDTDLVTRECVKYNLYGY
: :*: ** * **:* :**** *** : .** **:***
C1 TGTGVLSKNTSLVIPDGKVFTASSTGTIIGVSINSTTYSIMPCVTVPVSV
C2 TGTGVFN-VSTLTIPDSKLFVANGAGDIIAASVKGTVYSITPCVSVPVSV
C3 TGTGVFT-TSNLTIPDNKLFSASATGAISAVSIHNAVYAISPCVSVPVSV
C4 TGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSV
C5 TGTGVLSKNTSLVIPDGKVFTASSTGTIIGVSINSTTYSIMPCVTVPVSV
C6 TGTGVLNATTAISIPSDKVFSASDTGDIVAVRVNGTVYTIRPCVSVPISV
C7 TGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSV
C8 TGTGVFN-ESSLVIPDSKLFVASSTGDIIAAKVRGKVYSITPCVSVPISV
C9 TGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSV
C10 TGTGVFN-ESSLVIPDSKLFVASSTGDIIAAKVRGKVYSITPCVSVPISV
*****:. : : **..*:* *. :* * .. . .* * .**:**:**
C1 GYHPNFERALLFNGLSCSQRSRAVTEPVSVLWSA-----SATAQDAFDTP
C2 GYDPNFERALLFNGLACKERAVAVSMPASLFWRTVVQDNITNSVTTFDTL
C3 GFSPNFDKVLLFNGLACKERAVAVSIPASDYWMRV---RSSENDTIFDTE
C4 GYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTP
C5 GYHPNFERALLFNGLSCSQRSRAVTEPVSVLWSA-----SATAQDAFDTP
C6 GYHAGYERALLFNGLSCADRTSAITMPASTYWSTA---RAQSASNYYDTI
C7 GYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTP
C8 GYDPSFERALLFNGLSCSERSVAVSLPASDYWLAAVADNASTGVVTFDTL
C9 GYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTP
C10 GYDPSFERALLFNGLSCSERSVAVSLPASDYWVAAVADNASTGVVTFDTL
*: ..:::.******:* :*: *:. *.* * :**
C1 SGCVVNVELRNTTIVNTCAMPIGNSLCFINGSIAT----ANADSLPRLQL
C2 SGCVYNVYNATNIVVQSCSMPLGNSLCLANLTTST---VSVSRAGNLLSL
C3 SGCVYNAHNRTDLVVNECSLPLGNSLCLINDTAST-----RREASNLLTL
C4 SGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSL
C5 SGCVVNVELRNTTIVNTCAMPIGNSLCFINGSIAT----ANADSLPRLQL
C6 SGCVYNVDYNNATTVNQCVMPLGNSLCLVPNTQRV--------AGSRLTL
C7 SGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSL
C8 SGCVHNVRNATDITVPTCLMPLGNSLCLANITQPSQYGLSTTSSVNLLSL
C9 SGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSL
C10 SGCVHNVRNATDITVPTCLMPLGNSLCLANITQPSQYGLSTTSSVNLLSL
**** *. . * * :*:*****: : : * *
C1 VNYDPLYDNSTATPMTPVYWVKVPTNFTLSATEEYIQTTAPKITIDCARY
C2 VTYDPTAIAG-VKVMTPVYWISIPTNFTLGAVSEYIQTTSPKINVDCVKY
C3 VSFQPGIIAS-VKVLTPVYWVRVPTNFTLTATTEFIETTAPKITIDCARY
C4 VTYDPTAANA-VQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKY
C5 VNYDPLYDNSTATPMTPVYWVKVPTNFTLSATEEYIQTTAPKITIDCARY
C6 VNFDPMYVSDSVTSLTPIYWVNIPTNFTLAATEEFIQTTAPKMNIDCARY
C7 VTYDPTAANA-VQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKY
C8 VTYDPTFQGG-VKVMSPVYWISIPTNFTLGAITEYIQTTSPKVNVDCVKY
C9 VTYDPTAANA-VQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKY
C10 VTYDPTFQGG-VKVMSPVYWISIPTNFTLGAITEYIQTTSPKVNVDCVKY
*.::* . ::*:**: :****** * *:*:*::**:.:**.:*
C1 LCGDSSRCLNVLLHYGTFCNDINKALSRVSTILDSALLSLVKELSINTRD
C2 LCGDSERCTTVLLQYGTFCNDVNKALSEVSAIIDASMVSLVSEITADVVR
C3 LCGDSSRCLAVLEQYGTFCDDVNTALQRVNTMLDAAVVSLTSQLVSDIVP
C4 LCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVR
C5 LCGDSSRCLNVLLHYGTFCNDINKALSRVSTILDSALLSLVKELSINTRD
C6 LCGDSSRCLTVSLQYGTFCDDINKALLRVSQLLDTSLLALFKEFSTNVRP
C7 LCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVR
C8 LCGDSERCTTVLLQYGTFCDDVNKALSEVSSIIDASMISLVSEITADVVR
C9 LCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVR
C10 LCGDSERCTTVLLQYGTFCDDVNKALSEVSSIIDASMISLVSEITADVVR
*****.** * :*****:*:*.** .*. :*:::::* .:: :
C1 EVTTFSFDGDYNFTGLMGCLGPNCGAT-TYRSAFSDLLYDKVRITDPGFM
C2 S-ENAHFDTTYNFTGLLGCVGSSCSST--YRSALSDLLYNKVKVTDPGFM
C3 T-ENSNFDSTYNFTALMGCLGSSCNSK---RSAISDLLYNKVKIADPGFM
C4 N-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYNKVKVTDPGFM
C5 EVTTFSFDGDYNFTGLMGCLGPNCGAT-TYRSAFSDLLYDKVRITDPGFM
C6 E-AELSLDGAYNFTGLMGCLGSNCGGK-SHRSALSELLYNKVKVADPGFM
C7 N-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYNKVKVTDPGFM
C8 S-ENALFDTTYNFTGLLGCVGSNCNDRTTYRSALSDLLYNKVKVTDPGFM
C9 N-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYNKVKVTDPGFM
C10 S-ENALFDTTYNFTGLLGCVGSNCNDRTTYRSALSDLLYNKVKVTDPGFM
:* ****.*:**:*..*. ***:*:***:**:::*****
C1 QSYQKCIDSQWGGSIRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAV
C2 SSYQKCI-SQWGGDVRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAV
C3 DSYQKCIDSQWGGNIRDLICTQVFNGIAVLPPIVSPGMQALYTSLLVGAV
C4 QSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAV
C5 QSYQKCIDSQWGGSIRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAV
C6 SSYQKCIDSQWGGEVRDLICTQTYNGISVLPPIVAPGMQALYTSLLVGAV
C7 QSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAV
C8 SSYQKCI-SQWGGDIRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAV
C9 QSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAV
C10 SSYQKCI-SQWGGDIRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAV
.****** *****.:***:*** :***:******:*.*************
C1 ASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNAL
C2 ASAGFTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKAL
C3 ASSGYTFGITSVGVIPFATQLQFRLNGIGVTTQVLVDNQKLIASSFNNAL
C4 ASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNAL
C5 ASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNAL
C6 ASSGYTFGITSVGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNKAL
C7 ASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNAL
C8 ASAGYTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKAL
C9 ASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNAL
C10 ASAGYTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKAL
**:*:***:**.**:************:********:**:***.***:**
C1 VNIQKGFTETSIALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIF
C2 VSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIF
C3 NQIQKGFDATNSALSKIQAVINQHATQLQTLVLQLGNTFGAISSSINIIF
C4 TNIQKGFDATNEAISKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIF
C5 VNIQKGFTETSIALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIF
C6 TSIQEGFTATNQALAKMQAVINQHASQLQTLVIQLGNSFGAISSSLNEIF
C7 TNIQKGFDATNEALSKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIF
C8 VSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIF
C9 TNIQKGFDATNEALSKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIF
C10 VSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIF
.**:** *. *::*:* ****** **:*** ****:*****:*:* **
C1 SRLEGLAANAEVDRLINGRMMVLNTYVTQLLIQASEAKAQNALAAQKISE
C2 SRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVRAQALLAKQKISE
C3 SRLEGLEADAEVDRLISGRMVVLNTYVTQLLVQASRIKAQSDLALQKINE
C4 SRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISE
C5 SRLEGLAANAEVDRLINGRMMVLNTYVTQLLIQASEAKAQNALAAQKISE
C6 SRLEGLAADAEVDRLINGRMVVLNTYVTQLLIQASELRAQNQLAVQKISE
C7 SRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISE
C8 SRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVKSQALLAKQKISE
C9 SRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISE
C10 SRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVKSQALLAKQKISE
***:** *:*:*****.** :**********::*:. ::* ** ***.*
C1 CVKAQSLRNDFCGNGTHVLSIPQLAPNGVLFIHYAYTPTEYAFVQTSAGL
C2 CVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTAYAVVQTAAGL
C3 CVKSQTLRNEFCGNGTHVLSVPQLAPNGIMFIHYSYTPTQYATVQTAAGL
C4 CVKAQSLRNDFCGNGTHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGL
C5 CVKAQSLRNDFCGNGTHVLSIPQLAPNGVLFIHYAYTPTEYAFVQTSAGL
C6 CVKAQSSRNDFCGNGTHVLSIPQLAPNGVLFIHYTYRPTEYAYVQTSAGL
C7 CVKAQSLRNDFCGNGIHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGL
C8 CVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTSYALVQTAAGL
C9 CVKAQSLRNDFCGNGTHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGL
C10 CVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTSYALVQTAAGL
***:*: **:***** **:*:*******::*:**:* ** :* ***:***
C1 CHNGTGYAPRQGMFVLPNNTNMWHFTTMQFYNPVNISASNTQVLTSCSVN
C2 CFNNTGYAPVGGLFVLPNDSIYWHFTKLNFYNPVNLSNSNTQVLTTCSVN
C3 CFNGTGYAPRNGLFILPNNSNFWYFTQANFYNPVNISNSNTQVLESCSVN
C4 CYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLN
C5 CHNGTGYAPRQGMFVLPNNTNMWHFTTMQFYNPVNISASNTQVLTSCSVN
C6 CYNKTGYAPKGGMFVLPNNTNLWHFTAMNFYNPVNITVFNTQILTSCSLN
C7 CYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLN
C8 CLNNTGYAPRDGLFVLPNGSIYWQFTKMNFYNPVRLTNSNTQVLTTCSVN
C9 CYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLN
C10 CLNNTGYAPRDGLFVLPNGSIYWQFTKMNFYNPVRLTNSNTQVLTTCSVN
* * ***** *:*:***.: * ** :***** :: ***:* :*.:*
C1 YTSVNYTVLEPSVPGDYDFQKEFDKFYKNLSTIFNNTFNPNDFNFSTVDV
C2 YTAVNYTVLDPVVNSDFNFTAEFDKWYKNHSSYFNNTFNPGDFNFSTVDI
C3 YTTVNYTILSPQEPLYNNFDEEFNKFYKNLSSVFNNTFNPGAFNFSTVEL
C4 YSHVNYTVVNPSVPSDFDFEEEFNKWYKNHTSIFNNTFDPSAFNFSMVDV
C5 YTSVNYTVLEPSVPGDYDFQKEFDKFYKNLSTIFNNTFNPNDFNFSTVDV
C6 FTAVNYTVLEPLQYSDFDFDAQFEKFYKNISSHFNNTFDPNQFNFSTVDV
C7 YSHVNYTVVNPSVPSDFDFEEEFNKWYKNHSSIFNNTFDPSAFNFSMVDV
C8 YTTVNYTVLPPTDNMDFNFTAEFEKWYKNHSSQFNNTFNPGDFNFSTVDI
C9 YSHVNYTVVNPSVPSDFDFEEEFNKWYKNHSSIFNNTFDPSAFNFSMVDV
C10 YTTVNYTVLPPTDNMDFNFTAEFEKWYKNHSSQFNNTFNPGDFNFSTVDI
:: ****:: * :* :*:*:*** :: *****:*. **** *::
C1 TAQIKSLHDVVNQLNQSFIDLKKLNVYEKTIKWPWYVWLAMIAGIVGLVL
C2 ERELSTLTEVVRQLNESFIDLKKLNVYEQTIKWPWYVWLAMIAGLVGLAL
C3 QSEIATLNEVVQQLNKSFIDLKQMNVYEQTIKWPWYVWLAMIAGLVGLAL
C4 NKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLAL
C5 TAQIKSLHDVVNQLNQSFIDLKKLNVYEKTIKWPWYVWLAMIAGIVGLVL
C6 KEQLDTLTNVVKQLNESVIDLKQMNVYEQTIKWPWYVWLAMIAGIVGLVL
C7 NKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLAL
C8 QNELNTLNAVVKQLNESFIDLKKLNVYEQTIKWPWYIWLAMIAGLVGLAL
C9 NKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLAL
C10 QNELNTLNAVVKQLNESFIDLKKLNVYEQTIKWPWYIWLAMIAGLVGLAL
:: :* **.***:* ****::****:*******:*******:***.*
C1 AVIMLMCMTNCCSCFKGMCDCRRCCGSYDSYDDVYPAVRVNKKRTV
C2 AVVMLLCMTNCCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
C3 AVVMLLCMTNCCSCFKGMCSCRHC--YYDEIEDVYPAVRVHNKRTA
C4 AVVMLLCMTNCCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA
C5 AVIMLMCMTNCCSCFKGMCDCRRCCGSYDSYDDVYPAVRVNKKRTV
C6 AVVMLLCMTNCCSCFKGMCSCKQC--YYDELDDVYPAVRVHNKRTA
C7 AVVMLLCMTNCCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA
C8 AVVMLLCMTNCCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
C9 AVVMLLCMTNCCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA
C10 AVVMLLCMTNCCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
**:**:************* *: * **. :******** :***.
-- Starting log on Wed Oct 26 01:00:30 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result/gapped_alignment/codeml,BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 10 taxa and 3888 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C2
Taxon 4 -> C3
Taxon 5 -> C4
Taxon 6 -> C5
Taxon 7 -> C6
Taxon 8 -> C7
Taxon 9 -> C8
Taxon 10 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1666746032
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1271168575
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 5454994194
Seed = 33103869
Swapseed = 1666746032
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 420 unique site patterns
Division 2 has 303 unique site patterns
Division 3 has 713 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -37487.342112 -- 35.653401
Chain 2 -- -40137.886697 -- 35.653401
Chain 3 -- -33442.697383 -- 35.653401
Chain 4 -- -36998.875785 -- 35.653401
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -38911.760431 -- 35.653401
Chain 2 -- -34483.881474 -- 35.653401
Chain 3 -- -37313.090007 -- 35.653401
Chain 4 -- -38316.678601 -- 35.653401
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-37487.342] (-40137.887) (-33442.697) (-36998.876) * [-38911.760] (-34483.881) (-37313.090) (-38316.679)
1000 -- [-20898.441] (-20999.049) (-21123.366) (-21035.281) * (-21001.542) (-20932.849) (-20950.395) [-20853.057] -- 0:49:57
2000 -- (-20762.619) [-20749.232] (-20885.582) (-20813.059) * (-20813.616) [-20732.904] (-20748.387) (-20752.776) -- 0:58:13
3000 -- (-20718.783) [-20717.155] (-20771.304) (-20748.344) * (-20724.390) (-20724.696) (-20722.077) [-20718.214] -- 0:55:23
4000 -- [-20707.788] (-20712.881) (-20720.565) (-20703.831) * (-20713.325) (-20716.741) [-20705.049] (-20722.808) -- 0:58:06
5000 -- (-20708.683) (-20714.528) (-20711.213) [-20702.490] * (-20712.755) (-20711.116) [-20705.450] (-20704.521) -- 0:56:23
Average standard deviation of split frequencies: 0.052378
6000 -- (-20716.992) (-20705.170) [-20716.337] (-20715.088) * (-20710.687) [-20713.411] (-20704.960) (-20706.303) -- 0:57:59
7000 -- (-20702.613) (-20715.729) [-20703.091] (-20712.746) * (-20715.595) [-20705.831] (-20713.060) (-20706.152) -- 0:56:44
8000 -- (-20716.590) (-20709.491) [-20713.391] (-20703.775) * (-20714.614) (-20718.759) (-20704.738) [-20709.228] -- 0:57:52
9000 -- (-20711.891) [-20704.720] (-20706.857) (-20707.556) * (-20720.883) (-20714.686) [-20714.236] (-20706.634) -- 0:56:53
10000 -- (-20706.595) (-20706.136) (-20706.656) [-20707.244] * (-20715.590) (-20711.076) [-20704.932] (-20705.351) -- 0:57:45
Average standard deviation of split frequencies: 0.029463
11000 -- [-20707.192] (-20712.096) (-20705.581) (-20709.282) * (-20707.597) [-20707.650] (-20711.073) (-20701.831) -- 0:56:56
12000 -- [-20709.177] (-20706.186) (-20708.693) (-20705.459) * (-20723.909) (-20708.548) [-20702.315] (-20712.890) -- 0:57:38
13000 -- (-20706.473) (-20706.910) [-20708.681] (-20710.299) * (-20716.316) [-20711.864] (-20710.116) (-20702.745) -- 0:56:56
14000 -- (-20703.578) (-20702.679) (-20719.818) [-20711.106] * (-20712.840) (-20704.838) (-20709.533) [-20709.559] -- 0:57:31
15000 -- (-20706.971) (-20704.969) (-20705.041) [-20708.987] * (-20708.169) (-20710.449) [-20714.519] (-20720.375) -- 0:56:54
Average standard deviation of split frequencies: 0.006547
16000 -- (-20700.795) (-20706.763) [-20703.507] (-20708.503) * [-20707.784] (-20723.321) (-20714.853) (-20708.389) -- 0:56:22
17000 -- (-20704.405) (-20720.725) (-20712.878) [-20705.886] * (-20714.448) (-20709.826) (-20713.937) [-20703.074] -- 0:56:51
18000 -- (-20704.293) (-20709.626) [-20702.986] (-20705.668) * (-20719.694) (-20707.199) (-20705.379) [-20710.253] -- 0:57:17
19000 -- (-20710.809) (-20717.546) [-20709.994] (-20720.825) * (-20708.072) [-20702.353] (-20702.627) (-20709.932) -- 0:56:47
20000 -- (-20706.411) [-20705.035] (-20705.052) (-20709.286) * [-20704.050] (-20710.456) (-20708.166) (-20712.017) -- 0:57:10
Average standard deviation of split frequencies: 0.010138
21000 -- (-20710.428) (-20711.908) [-20702.613] (-20709.717) * (-20717.025) (-20710.295) [-20709.976] (-20715.843) -- 0:56:43
22000 -- (-20709.914) [-20710.868] (-20710.820) (-20721.126) * (-20721.973) [-20706.464] (-20704.377) (-20714.327) -- 0:57:03
23000 -- [-20705.150] (-20721.226) (-20697.788) (-20706.821) * (-20721.889) (-20703.579) [-20703.679] (-20707.265) -- 0:56:38
24000 -- (-20707.825) [-20706.527] (-20719.965) (-20710.520) * [-20718.993] (-20712.956) (-20710.668) (-20706.341) -- 0:56:56
25000 -- (-20711.490) [-20702.184] (-20716.253) (-20705.017) * [-20701.374] (-20715.780) (-20710.984) (-20697.942) -- 0:56:33
Average standard deviation of split frequencies: 0.008058
26000 -- (-20716.629) [-20705.619] (-20708.032) (-20710.634) * [-20707.020] (-20714.637) (-20706.144) (-20712.766) -- 0:56:49
27000 -- [-20706.370] (-20701.784) (-20704.806) (-20712.243) * (-20701.882) [-20705.662] (-20718.764) (-20714.196) -- 0:56:27
28000 -- (-20705.093) (-20714.538) [-20711.027] (-20706.243) * (-20710.787) (-20704.646) [-20710.394] (-20716.789) -- 0:56:07
29000 -- (-20713.528) (-20710.503) (-20707.579) [-20707.554] * (-20709.998) [-20702.175] (-20714.307) (-20703.527) -- 0:56:21
30000 -- (-20711.118) (-20701.338) [-20700.836] (-20715.695) * (-20705.544) (-20709.712) (-20718.203) [-20703.585] -- 0:56:02
Average standard deviation of split frequencies: 0.013664
31000 -- (-20701.754) (-20710.078) (-20709.254) [-20710.917] * [-20703.779] (-20711.466) (-20704.491) (-20706.934) -- 0:56:15
32000 -- [-20701.418] (-20716.003) (-20704.859) (-20715.223) * (-20707.715) (-20708.139) (-20707.478) [-20709.097] -- 0:55:57
33000 -- [-20710.333] (-20723.579) (-20699.932) (-20709.599) * [-20710.848] (-20712.394) (-20703.365) (-20707.873) -- 0:56:09
34000 -- [-20701.821] (-20706.841) (-20712.289) (-20706.115) * (-20710.202) (-20710.550) (-20709.768) [-20709.864] -- 0:55:52
35000 -- (-20700.389) (-20708.669) [-20709.645] (-20719.308) * (-20711.991) [-20707.602] (-20717.349) (-20709.297) -- 0:56:03
Average standard deviation of split frequencies: 0.017459
36000 -- (-20706.422) (-20712.841) (-20714.931) [-20706.340] * (-20708.781) (-20706.897) (-20706.505) [-20705.783] -- 0:55:47
37000 -- (-20719.549) (-20706.594) (-20720.634) [-20706.087] * (-20709.716) (-20712.098) (-20708.967) [-20704.479] -- 0:55:57
38000 -- (-20706.423) [-20701.830] (-20711.525) (-20702.229) * (-20702.528) (-20712.389) [-20707.594] (-20710.259) -- 0:55:41
39000 -- (-20713.642) [-20701.974] (-20706.989) (-20708.116) * (-20713.890) (-20709.995) (-20707.026) [-20705.819] -- 0:55:51
40000 -- (-20705.615) [-20703.568] (-20706.230) (-20706.593) * [-20706.398] (-20704.188) (-20715.867) (-20709.435) -- 0:55:36
Average standard deviation of split frequencies: 0.023184
41000 -- (-20704.457) (-20710.430) [-20705.227] (-20711.127) * (-20707.119) [-20700.681] (-20710.570) (-20710.005) -- 0:55:44
42000 -- (-20709.827) (-20711.511) [-20706.565] (-20716.152) * (-20711.017) (-20708.261) (-20720.071) [-20710.571] -- 0:55:30
43000 -- [-20703.317] (-20714.523) (-20704.195) (-20706.828) * (-20710.229) (-20703.721) [-20711.713] (-20711.795) -- 0:55:38
44000 -- (-20709.121) (-20709.558) [-20704.834] (-20706.589) * (-20704.673) (-20704.474) (-20710.333) [-20706.035] -- 0:55:24
45000 -- (-20717.224) [-20706.764] (-20708.939) (-20714.579) * [-20705.733] (-20706.352) (-20710.898) (-20702.520) -- 0:55:31
Average standard deviation of split frequencies: 0.020496
46000 -- (-20712.693) (-20710.437) [-20707.421] (-20706.200) * [-20716.384] (-20706.649) (-20708.210) (-20706.324) -- 0:55:18
47000 -- (-20700.118) (-20709.869) [-20707.940] (-20709.279) * [-20704.433] (-20701.378) (-20712.002) (-20729.775) -- 0:55:25
48000 -- (-20711.177) (-20713.398) [-20708.004] (-20712.812) * (-20713.017) (-20709.823) (-20710.282) [-20709.453] -- 0:55:12
49000 -- [-20709.980] (-20704.698) (-20710.936) (-20709.988) * [-20706.798] (-20709.235) (-20705.043) (-20707.084) -- 0:55:18
50000 -- (-20706.368) (-20702.964) (-20706.764) [-20708.183] * (-20702.829) [-20702.263] (-20704.715) (-20716.105) -- 0:55:06
Average standard deviation of split frequencies: 0.024811
51000 -- (-20702.228) (-20718.691) [-20698.525] (-20710.397) * (-20703.361) [-20706.313] (-20717.786) (-20702.800) -- 0:54:53
52000 -- (-20710.798) (-20711.787) [-20709.616] (-20703.198) * (-20702.062) (-20704.718) [-20705.418] (-20698.203) -- 0:54:59
53000 -- (-20709.818) [-20708.586] (-20721.026) (-20711.742) * [-20703.109] (-20706.678) (-20704.486) (-20707.355) -- 0:54:47
54000 -- [-20706.064] (-20713.061) (-20704.267) (-20702.255) * [-20712.590] (-20713.240) (-20703.931) (-20707.130) -- 0:54:53
55000 -- (-20726.178) (-20705.538) [-20709.160] (-20705.102) * [-20702.240] (-20715.588) (-20708.422) (-20710.169) -- 0:54:41
Average standard deviation of split frequencies: 0.026189
56000 -- (-20713.003) (-20709.400) (-20712.712) [-20709.545] * (-20712.962) [-20711.101] (-20708.401) (-20716.762) -- 0:54:47
57000 -- (-20706.179) (-20712.706) (-20714.521) [-20704.691] * [-20715.956] (-20721.758) (-20705.020) (-20710.139) -- 0:54:35
58000 -- (-20703.316) [-20700.970] (-20707.671) (-20720.978) * (-20706.221) (-20714.004) (-20706.374) [-20711.186] -- 0:54:40
59000 -- [-20705.009] (-20705.338) (-20705.331) (-20709.627) * (-20712.414) (-20703.380) [-20709.038] (-20711.574) -- 0:54:29
60000 -- (-20712.628) (-20715.784) [-20702.725] (-20707.898) * [-20712.064] (-20708.776) (-20713.803) (-20704.651) -- 0:54:34
Average standard deviation of split frequencies: 0.029355
61000 -- (-20718.366) (-20715.659) (-20713.885) [-20704.064] * (-20715.889) (-20709.002) (-20715.084) [-20709.148] -- 0:54:23
62000 -- [-20704.863] (-20710.317) (-20709.186) (-20701.098) * (-20718.436) [-20713.377] (-20707.768) (-20705.626) -- 0:54:27
63000 -- (-20709.740) [-20705.300] (-20704.721) (-20700.370) * (-20721.088) [-20699.114] (-20712.796) (-20702.729) -- 0:54:17
64000 -- [-20712.854] (-20705.363) (-20712.491) (-20709.450) * (-20716.018) [-20715.693] (-20719.049) (-20701.467) -- 0:54:21
65000 -- (-20717.196) (-20721.135) (-20704.864) [-20707.268] * (-20717.347) (-20702.156) (-20706.271) [-20705.944] -- 0:54:10
Average standard deviation of split frequencies: 0.026983
66000 -- (-20715.705) (-20717.629) (-20707.094) [-20704.526] * [-20705.092] (-20703.398) (-20705.023) (-20716.764) -- 0:54:00
67000 -- (-20713.949) (-20710.174) (-20704.357) [-20702.287] * [-20707.540] (-20717.607) (-20701.496) (-20714.561) -- 0:54:04
68000 -- (-20701.051) (-20706.811) (-20711.296) [-20704.250] * [-20707.515] (-20712.830) (-20705.749) (-20711.120) -- 0:53:54
69000 -- (-20711.163) [-20706.049] (-20710.915) (-20710.648) * (-20715.184) [-20704.376] (-20708.930) (-20706.426) -- 0:53:58
70000 -- [-20711.818] (-20699.873) (-20708.853) (-20705.134) * (-20713.101) (-20711.846) (-20707.213) [-20700.780] -- 0:53:48
Average standard deviation of split frequencies: 0.028166
71000 -- [-20703.514] (-20707.118) (-20704.256) (-20708.736) * (-20704.872) (-20718.651) (-20707.866) [-20706.377] -- 0:53:51
72000 -- (-20711.117) (-20712.950) (-20706.508) [-20706.798] * (-20708.559) (-20720.243) (-20722.646) [-20704.511] -- 0:53:42
73000 -- [-20721.712] (-20705.284) (-20706.454) (-20711.283) * (-20702.674) [-20702.937] (-20705.137) (-20709.530) -- 0:53:45
74000 -- (-20707.125) [-20701.022] (-20720.686) (-20705.252) * (-20704.477) (-20705.627) [-20706.071] (-20711.533) -- 0:53:35
75000 -- (-20710.664) [-20706.343] (-20713.732) (-20704.542) * (-20711.367) (-20707.191) [-20712.493] (-20703.022) -- 0:53:39
Average standard deviation of split frequencies: 0.024811
76000 -- (-20705.240) (-20704.918) (-20703.074) [-20705.808] * (-20707.486) (-20712.193) (-20702.943) [-20701.016] -- 0:53:29
77000 -- (-20714.307) [-20701.560] (-20707.412) (-20709.427) * (-20703.137) [-20702.434] (-20702.804) (-20706.914) -- 0:53:32
78000 -- [-20710.295] (-20714.338) (-20712.859) (-20715.043) * (-20709.108) [-20705.887] (-20716.830) (-20706.077) -- 0:53:23
79000 -- (-20708.374) [-20707.096] (-20708.566) (-20716.591) * (-20711.674) (-20706.643) (-20707.337) [-20711.942] -- 0:53:14
80000 -- (-20716.795) [-20703.203] (-20704.064) (-20701.715) * (-20704.497) (-20703.156) (-20708.822) [-20708.527] -- 0:53:17
Average standard deviation of split frequencies: 0.025973
81000 -- [-20706.712] (-20712.917) (-20709.203) (-20704.567) * (-20703.582) [-20708.562] (-20715.343) (-20714.188) -- 0:53:08
82000 -- (-20716.254) (-20711.789) [-20705.451] (-20700.604) * (-20706.799) (-20707.510) [-20715.660] (-20706.205) -- 0:53:10
83000 -- (-20705.231) (-20708.911) [-20705.253] (-20708.557) * [-20700.355] (-20708.264) (-20710.790) (-20706.331) -- 0:53:01
84000 -- (-20703.944) (-20717.762) (-20711.912) [-20706.787] * [-20703.665] (-20704.866) (-20713.177) (-20710.900) -- 0:53:04
85000 -- (-20721.009) (-20706.120) [-20701.348] (-20713.342) * (-20702.802) [-20705.506] (-20710.336) (-20710.198) -- 0:52:55
Average standard deviation of split frequencies: 0.025580
86000 -- (-20707.205) (-20705.767) (-20706.100) [-20701.667] * [-20701.975] (-20702.553) (-20706.043) (-20708.813) -- 0:52:57
87000 -- (-20708.441) [-20703.319] (-20714.786) (-20704.838) * (-20706.768) [-20700.597] (-20705.377) (-20714.173) -- 0:52:49
88000 -- [-20702.567] (-20703.543) (-20706.856) (-20707.067) * (-20711.225) (-20711.755) [-20709.642] (-20705.741) -- 0:52:51
89000 -- [-20707.739] (-20711.301) (-20719.331) (-20705.397) * (-20703.341) (-20712.214) [-20706.305] (-20701.492) -- 0:52:42
90000 -- (-20707.813) (-20712.666) (-20704.290) [-20708.729] * (-20700.609) [-20711.711] (-20710.260) (-20707.056) -- 0:52:44
Average standard deviation of split frequencies: 0.021953
91000 -- (-20705.193) (-20716.280) (-20708.734) [-20707.826] * (-20705.122) [-20706.964] (-20701.047) (-20708.560) -- 0:52:36
92000 -- (-20704.130) (-20708.601) [-20699.582] (-20716.361) * (-20706.777) [-20707.041] (-20708.608) (-20709.174) -- 0:52:38
93000 -- (-20715.506) (-20715.295) (-20713.956) [-20709.813] * (-20707.120) (-20714.158) (-20711.217) [-20704.082] -- 0:52:30
94000 -- (-20707.962) [-20702.215] (-20698.865) (-20711.358) * (-20712.335) [-20710.248] (-20715.092) (-20707.471) -- 0:52:31
95000 -- [-20701.820] (-20702.447) (-20703.726) (-20704.211) * [-20707.810] (-20704.424) (-20708.695) (-20713.460) -- 0:52:23
Average standard deviation of split frequencies: 0.022915
96000 -- (-20702.861) (-20708.689) [-20713.472] (-20706.577) * (-20713.710) (-20702.293) [-20705.953] (-20712.465) -- 0:52:25
97000 -- (-20708.117) (-20706.277) [-20706.827] (-20711.126) * [-20713.628] (-20709.735) (-20709.869) (-20712.280) -- 0:52:17
98000 -- (-20704.082) [-20705.723] (-20709.483) (-20703.637) * [-20705.847] (-20703.677) (-20714.098) (-20714.453) -- 0:52:09
99000 -- [-20703.212] (-20702.414) (-20711.036) (-20702.849) * (-20717.977) (-20702.915) [-20699.121] (-20710.026) -- 0:52:10
100000 -- (-20708.371) (-20705.866) [-20707.290] (-20711.531) * (-20714.073) (-20708.432) (-20704.297) [-20700.806] -- 0:52:03
Average standard deviation of split frequencies: 0.021853
101000 -- (-20707.644) (-20702.444) (-20701.940) [-20704.705] * (-20705.589) (-20707.564) [-20700.584] (-20710.265) -- 0:52:04
102000 -- [-20710.967] (-20705.592) (-20708.117) (-20711.754) * [-20705.558] (-20713.387) (-20701.299) (-20708.304) -- 0:51:56
103000 -- (-20703.154) [-20700.619] (-20717.734) (-20714.375) * (-20711.356) (-20705.630) (-20701.544) [-20710.423] -- 0:51:57
104000 -- (-20709.219) [-20715.638] (-20711.676) (-20706.593) * (-20711.526) (-20711.661) (-20703.661) [-20710.124] -- 0:51:50
105000 -- [-20705.676] (-20712.301) (-20709.645) (-20705.588) * (-20702.868) [-20706.216] (-20709.500) (-20707.130) -- 0:51:51
Average standard deviation of split frequencies: 0.020754
106000 -- (-20709.212) [-20707.456] (-20709.082) (-20712.942) * (-20703.032) (-20708.076) (-20707.833) [-20703.506] -- 0:51:43
107000 -- (-20719.877) [-20714.907] (-20711.720) (-20706.215) * (-20718.912) (-20732.615) (-20700.428) [-20701.829] -- 0:51:44
108000 -- [-20703.558] (-20730.007) (-20722.937) (-20708.901) * (-20714.983) [-20708.027] (-20706.159) (-20716.398) -- 0:51:37
109000 -- [-20701.176] (-20711.319) (-20703.972) (-20705.741) * (-20708.205) (-20712.842) [-20703.913] (-20703.677) -- 0:51:38
110000 -- (-20709.327) (-20703.195) (-20713.196) [-20703.637] * [-20709.636] (-20707.048) (-20706.113) (-20717.731) -- 0:51:30
Average standard deviation of split frequencies: 0.016092
111000 -- [-20704.646] (-20704.720) (-20707.359) (-20712.831) * [-20710.826] (-20709.487) (-20700.672) (-20716.968) -- 0:51:31
112000 -- (-20702.372) [-20710.610] (-20708.687) (-20704.675) * (-20711.180) (-20713.489) (-20707.596) [-20710.014] -- 0:51:24
113000 -- (-20702.336) (-20710.963) (-20708.958) [-20713.127] * (-20713.392) [-20703.580] (-20712.335) (-20711.354) -- 0:51:17
114000 -- [-20700.973] (-20716.577) (-20712.193) (-20711.276) * (-20710.060) [-20709.270] (-20704.784) (-20712.437) -- 0:51:17
115000 -- (-20707.544) (-20719.898) (-20707.648) [-20704.280] * (-20705.719) [-20701.192] (-20713.082) (-20701.314) -- 0:51:10
Average standard deviation of split frequencies: 0.014449
116000 -- (-20703.668) (-20709.607) (-20710.660) [-20705.474] * (-20710.786) [-20700.532] (-20708.767) (-20703.910) -- 0:51:11
117000 -- (-20712.868) (-20714.202) (-20707.299) [-20708.303] * [-20710.193] (-20709.583) (-20707.846) (-20716.988) -- 0:51:04
118000 -- (-20709.915) [-20712.208] (-20703.259) (-20711.299) * [-20709.053] (-20711.024) (-20706.962) (-20711.524) -- 0:51:04
119000 -- (-20710.596) (-20716.281) (-20708.771) [-20704.264] * (-20710.538) (-20704.978) (-20711.934) [-20705.721] -- 0:50:57
120000 -- (-20706.727) (-20709.205) [-20707.758] (-20711.951) * (-20705.646) (-20716.555) [-20703.379] (-20707.086) -- 0:50:58
Average standard deviation of split frequencies: 0.015627
121000 -- (-20714.628) [-20708.292] (-20706.746) (-20708.880) * (-20709.046) (-20716.382) (-20706.997) [-20703.026] -- 0:50:51
122000 -- (-20709.439) (-20713.939) [-20702.430] (-20709.668) * (-20706.047) (-20714.771) (-20714.592) [-20705.826] -- 0:50:51
123000 -- [-20706.069] (-20719.111) (-20706.797) (-20714.529) * (-20713.610) (-20712.708) [-20710.181] (-20716.261) -- 0:50:44
124000 -- (-20705.050) (-20707.679) (-20712.152) [-20712.800] * [-20702.913] (-20713.462) (-20706.447) (-20703.844) -- 0:50:44
125000 -- [-20705.113] (-20712.483) (-20707.120) (-20714.047) * (-20697.538) (-20709.774) [-20710.613] (-20705.718) -- 0:50:38
Average standard deviation of split frequencies: 0.016628
126000 -- (-20707.659) (-20714.951) [-20707.731] (-20709.844) * (-20713.762) (-20709.762) (-20706.103) [-20706.294] -- 0:50:38
127000 -- [-20701.208] (-20701.966) (-20700.042) (-20713.206) * [-20702.560] (-20704.301) (-20711.986) (-20714.962) -- 0:50:31
128000 -- (-20704.182) (-20704.421) [-20705.890] (-20701.893) * [-20699.666] (-20711.573) (-20701.622) (-20718.857) -- 0:50:31
129000 -- [-20705.627] (-20701.335) (-20709.254) (-20704.521) * [-20705.889] (-20712.862) (-20708.982) (-20714.644) -- 0:50:24
130000 -- (-20700.890) (-20708.801) [-20706.571] (-20704.020) * [-20706.665] (-20710.943) (-20706.833) (-20716.419) -- 0:50:18
Average standard deviation of split frequencies: 0.016034
131000 -- [-20705.748] (-20710.959) (-20710.163) (-20704.302) * [-20703.850] (-20713.412) (-20711.206) (-20711.437) -- 0:50:18
132000 -- (-20719.148) (-20718.842) (-20714.351) [-20709.456] * [-20704.531] (-20708.627) (-20708.239) (-20712.740) -- 0:50:11
133000 -- [-20706.815] (-20722.478) (-20710.169) (-20707.576) * (-20699.830) (-20704.680) (-20708.613) [-20712.945] -- 0:50:11
134000 -- [-20704.352] (-20719.800) (-20714.596) (-20712.385) * (-20707.442) [-20702.005] (-20703.422) (-20709.029) -- 0:50:05
135000 -- (-20715.758) (-20717.567) [-20708.443] (-20702.683) * (-20707.694) (-20714.855) (-20712.636) [-20704.655] -- 0:50:05
Average standard deviation of split frequencies: 0.016176
136000 -- (-20702.206) (-20720.883) [-20708.386] (-20710.412) * [-20704.399] (-20711.973) (-20710.538) (-20712.161) -- 0:49:58
137000 -- (-20709.712) (-20718.031) (-20708.353) [-20700.993] * [-20719.313] (-20710.540) (-20717.881) (-20705.902) -- 0:49:58
138000 -- (-20712.851) [-20702.705] (-20719.352) (-20708.285) * [-20709.375] (-20709.062) (-20710.332) (-20714.259) -- 0:49:52
139000 -- [-20704.758] (-20705.768) (-20701.378) (-20709.468) * (-20705.973) (-20703.374) [-20703.291] (-20707.333) -- 0:49:51
140000 -- (-20708.659) [-20705.816] (-20711.891) (-20701.722) * (-20706.926) (-20702.758) (-20702.616) [-20706.941] -- 0:49:45
Average standard deviation of split frequencies: 0.016384
141000 -- [-20703.302] (-20703.103) (-20713.937) (-20705.716) * (-20714.722) (-20710.260) (-20712.080) [-20702.704] -- 0:49:45
142000 -- [-20710.336] (-20715.490) (-20711.531) (-20704.326) * (-20702.046) [-20708.914] (-20707.363) (-20718.521) -- 0:49:38
143000 -- [-20698.758] (-20704.719) (-20707.677) (-20699.284) * (-20708.193) (-20704.744) [-20704.413] (-20705.922) -- 0:49:32
144000 -- [-20702.930] (-20711.669) (-20716.419) (-20707.476) * [-20704.583] (-20711.695) (-20707.218) (-20711.024) -- 0:49:32
145000 -- (-20714.354) (-20708.705) (-20715.719) [-20705.091] * (-20708.951) (-20712.104) [-20701.742] (-20707.340) -- 0:49:25
Average standard deviation of split frequencies: 0.013633
146000 -- (-20709.453) (-20717.209) [-20707.289] (-20708.371) * (-20718.124) (-20708.567) [-20702.328] (-20706.684) -- 0:49:25
147000 -- [-20704.261] (-20711.137) (-20706.789) (-20707.922) * [-20701.608] (-20716.520) (-20705.232) (-20707.225) -- 0:49:19
148000 -- (-20708.588) (-20717.003) (-20704.429) [-20699.976] * (-20705.285) (-20710.504) (-20705.526) [-20707.429] -- 0:49:18
149000 -- [-20704.617] (-20711.389) (-20709.981) (-20708.719) * (-20704.090) (-20708.445) (-20709.101) [-20713.939] -- 0:49:12
150000 -- (-20707.996) (-20703.421) (-20716.856) [-20717.703] * (-20701.093) (-20728.153) (-20713.948) [-20708.429] -- 0:49:12
Average standard deviation of split frequencies: 0.013906
151000 -- [-20708.695] (-20712.988) (-20706.969) (-20707.389) * [-20707.296] (-20720.779) (-20709.920) (-20702.997) -- 0:49:06
152000 -- (-20709.901) [-20707.808] (-20708.753) (-20710.091) * (-20711.845) (-20710.759) (-20710.304) [-20702.834] -- 0:49:05
153000 -- (-20703.213) (-20708.878) [-20709.184] (-20718.206) * (-20712.326) (-20714.084) [-20706.169] (-20718.622) -- 0:48:59
154000 -- (-20706.927) (-20708.743) [-20706.917] (-20707.163) * [-20712.968] (-20717.954) (-20704.318) (-20717.564) -- 0:48:59
155000 -- (-20704.377) [-20711.841] (-20705.630) (-20708.396) * [-20709.878] (-20713.224) (-20705.014) (-20713.551) -- 0:48:52
Average standard deviation of split frequencies: 0.014102
156000 -- (-20704.998) (-20704.962) (-20706.655) [-20704.233] * (-20708.005) (-20701.603) [-20708.990] (-20708.292) -- 0:48:52
157000 -- (-20708.665) (-20708.147) [-20705.343] (-20709.190) * [-20703.023] (-20708.751) (-20712.114) (-20711.529) -- 0:48:46
158000 -- (-20706.409) [-20709.035] (-20704.580) (-20715.142) * (-20703.087) (-20706.931) [-20706.425] (-20702.837) -- 0:48:45
159000 -- [-20704.244] (-20715.457) (-20704.018) (-20702.434) * (-20708.545) (-20702.669) (-20701.901) [-20701.020] -- 0:48:39
160000 -- (-20704.154) (-20710.870) [-20708.611] (-20709.974) * (-20708.417) (-20707.854) (-20706.287) [-20708.345] -- 0:48:39
Average standard deviation of split frequencies: 0.014344
161000 -- [-20702.925] (-20714.204) (-20708.666) (-20713.026) * (-20705.767) [-20708.668] (-20718.413) (-20709.231) -- 0:48:33
162000 -- (-20708.056) (-20715.927) [-20705.062] (-20709.456) * (-20711.643) [-20704.975] (-20702.437) (-20710.756) -- 0:48:32
163000 -- [-20709.698] (-20715.753) (-20700.644) (-20705.403) * (-20710.549) (-20705.320) [-20704.758] (-20709.757) -- 0:48:26
164000 -- (-20705.178) [-20709.550] (-20702.468) (-20719.607) * (-20711.220) (-20711.301) (-20710.819) [-20704.345] -- 0:48:25
165000 -- [-20708.987] (-20709.495) (-20708.126) (-20702.342) * (-20699.159) [-20701.380] (-20703.566) (-20701.621) -- 0:48:19
Average standard deviation of split frequencies: 0.013252
166000 -- (-20708.666) (-20713.563) [-20705.366] (-20699.701) * (-20707.091) [-20707.283] (-20705.717) (-20712.488) -- 0:48:18
167000 -- (-20713.715) (-20708.971) (-20702.537) [-20704.325] * (-20710.352) (-20706.615) (-20704.544) [-20708.060] -- 0:48:13
168000 -- [-20703.524] (-20712.782) (-20707.188) (-20705.435) * [-20708.039] (-20710.181) (-20704.486) (-20717.088) -- 0:48:12
169000 -- (-20706.637) (-20709.778) (-20722.410) [-20711.095] * (-20705.886) [-20704.467] (-20702.606) (-20710.956) -- 0:48:06
170000 -- [-20710.643] (-20712.098) (-20709.145) (-20701.347) * [-20706.556] (-20706.574) (-20712.402) (-20711.943) -- 0:48:05
Average standard deviation of split frequencies: 0.014118
171000 -- (-20709.756) [-20704.394] (-20713.789) (-20709.258) * (-20706.175) (-20700.098) [-20701.840] (-20703.348) -- 0:47:59
172000 -- (-20711.905) (-20704.460) (-20714.030) [-20707.321] * (-20700.462) [-20706.166] (-20711.199) (-20703.641) -- 0:47:58
173000 -- (-20699.831) (-20713.966) [-20714.294] (-20709.058) * (-20708.484) (-20704.010) [-20706.536] (-20707.737) -- 0:47:52
174000 -- (-20716.382) [-20709.373] (-20710.700) (-20707.816) * [-20706.927] (-20704.333) (-20712.535) (-20719.048) -- 0:47:52
175000 -- (-20723.383) (-20703.954) [-20706.892] (-20714.847) * (-20709.260) (-20717.778) [-20699.616] (-20705.729) -- 0:47:46
Average standard deviation of split frequencies: 0.014285
176000 -- (-20718.662) (-20710.698) (-20711.192) [-20711.120] * (-20711.779) (-20711.252) (-20707.507) [-20707.426] -- 0:47:45
177000 -- (-20700.193) (-20702.989) [-20705.049] (-20710.313) * (-20711.324) [-20708.673] (-20708.446) (-20708.905) -- 0:47:39
178000 -- (-20714.452) (-20707.984) [-20709.408] (-20722.615) * (-20713.067) (-20710.044) (-20715.598) [-20706.499] -- 0:47:38
179000 -- (-20711.505) [-20703.341] (-20713.727) (-20716.609) * (-20711.298) (-20712.092) (-20714.501) [-20713.773] -- 0:47:32
180000 -- (-20707.779) (-20702.928) (-20700.521) [-20706.462] * (-20722.038) (-20701.960) (-20715.218) [-20702.630] -- 0:47:31
Average standard deviation of split frequencies: 0.015076
181000 -- (-20705.028) (-20709.554) [-20701.619] (-20710.577) * (-20719.396) (-20704.768) [-20702.027] (-20714.127) -- 0:47:26
182000 -- [-20702.061] (-20704.774) (-20713.965) (-20713.186) * (-20713.899) (-20709.983) (-20697.620) [-20705.980] -- 0:47:20
183000 -- [-20713.032] (-20703.166) (-20708.778) (-20708.312) * [-20697.665] (-20707.111) (-20705.805) (-20716.303) -- 0:47:19
184000 -- (-20708.952) (-20708.312) (-20719.118) [-20708.356] * (-20706.829) (-20705.417) [-20702.477] (-20709.236) -- 0:47:13
185000 -- (-20706.036) [-20710.692] (-20713.773) (-20706.611) * (-20710.446) (-20704.683) (-20705.559) [-20704.675] -- 0:47:12
Average standard deviation of split frequencies: 0.014643
186000 -- [-20702.224] (-20713.737) (-20704.252) (-20703.254) * [-20709.115] (-20703.523) (-20705.119) (-20709.146) -- 0:47:07
187000 -- (-20713.666) (-20722.559) (-20712.667) [-20702.679] * [-20696.298] (-20706.595) (-20703.718) (-20702.564) -- 0:47:05
188000 -- [-20709.349] (-20715.644) (-20714.369) (-20716.754) * (-20709.090) [-20705.081] (-20710.892) (-20703.660) -- 0:47:00
189000 -- (-20711.336) (-20708.003) [-20711.215] (-20710.701) * (-20713.497) (-20710.756) (-20710.970) [-20706.183] -- 0:46:59
190000 -- (-20719.082) (-20702.270) (-20713.257) [-20708.319] * (-20708.635) (-20712.310) (-20712.419) [-20705.543] -- 0:46:53
Average standard deviation of split frequencies: 0.013186
191000 -- (-20702.813) (-20704.376) (-20716.506) [-20701.814] * (-20716.866) [-20705.763] (-20707.338) (-20708.228) -- 0:46:52
192000 -- (-20707.578) (-20705.893) (-20712.767) [-20707.338] * (-20706.933) [-20701.115] (-20710.760) (-20712.426) -- 0:46:46
193000 -- (-20717.761) (-20702.838) [-20706.560] (-20707.185) * (-20713.911) [-20700.955] (-20708.904) (-20714.304) -- 0:46:45
194000 -- (-20716.646) (-20707.172) [-20703.319] (-20704.209) * (-20706.981) [-20707.883] (-20719.152) (-20707.838) -- 0:46:40
195000 -- (-20717.468) (-20717.668) [-20703.772] (-20715.391) * [-20712.012] (-20707.878) (-20715.310) (-20709.527) -- 0:46:38
Average standard deviation of split frequencies: 0.013362
196000 -- (-20724.127) (-20715.916) (-20708.426) [-20711.185] * (-20702.843) (-20707.715) (-20704.777) [-20704.328] -- 0:46:33
197000 -- [-20707.463] (-20712.022) (-20712.385) (-20703.929) * (-20713.143) (-20711.555) [-20702.757] (-20701.284) -- 0:46:32
198000 -- (-20714.696) (-20707.294) [-20711.276] (-20708.820) * (-20703.734) (-20718.699) (-20716.570) [-20707.820] -- 0:46:26
199000 -- (-20709.403) (-20714.021) [-20703.126] (-20706.018) * [-20705.168] (-20710.811) (-20720.528) (-20709.819) -- 0:46:25
200000 -- (-20716.238) (-20710.543) [-20707.836] (-20709.058) * (-20703.752) (-20707.222) [-20714.387] (-20711.563) -- 0:46:20
Average standard deviation of split frequencies: 0.012007
201000 -- (-20716.390) (-20703.783) (-20711.902) [-20708.204] * (-20712.275) (-20710.697) (-20710.927) [-20705.677] -- 0:46:18
202000 -- (-20707.115) (-20705.251) [-20702.306] (-20715.639) * [-20701.999] (-20709.295) (-20709.359) (-20700.766) -- 0:46:13
203000 -- (-20723.806) [-20704.948] (-20705.151) (-20726.393) * (-20708.837) [-20709.522] (-20711.911) (-20704.051) -- 0:46:11
204000 -- (-20710.543) [-20705.889] (-20715.296) (-20714.730) * (-20713.611) (-20723.944) [-20709.976] (-20704.299) -- 0:46:06
205000 -- (-20702.386) (-20707.928) [-20710.827] (-20705.043) * [-20708.053] (-20713.929) (-20715.378) (-20701.237) -- 0:46:05
Average standard deviation of split frequencies: 0.014239
206000 -- (-20710.813) (-20709.591) (-20707.854) [-20700.913] * (-20703.087) (-20711.369) [-20707.622] (-20709.728) -- 0:45:59
207000 -- (-20715.604) (-20708.926) (-20712.664) [-20700.542] * [-20703.573] (-20714.073) (-20713.858) (-20715.304) -- 0:45:58
208000 -- (-20701.814) [-20707.254] (-20715.258) (-20700.391) * (-20710.317) (-20708.309) [-20706.186] (-20707.654) -- 0:45:52
209000 -- (-20706.405) [-20707.298] (-20711.905) (-20708.729) * (-20703.590) (-20704.925) (-20710.421) [-20711.154] -- 0:45:51
210000 -- (-20711.225) (-20705.547) (-20705.434) [-20704.116] * [-20701.417] (-20716.004) (-20705.879) (-20712.629) -- 0:45:46
Average standard deviation of split frequencies: 0.015415
211000 -- (-20710.663) (-20706.856) (-20710.132) [-20703.622] * [-20704.355] (-20715.694) (-20707.409) (-20706.557) -- 0:45:44
212000 -- (-20717.186) [-20709.868] (-20719.136) (-20714.682) * (-20716.578) (-20706.977) (-20723.145) [-20701.685] -- 0:45:39
213000 -- (-20717.508) (-20704.834) [-20706.445] (-20706.698) * (-20727.242) (-20704.448) (-20710.298) [-20705.011] -- 0:45:37
214000 -- (-20707.411) [-20710.800] (-20714.750) (-20708.587) * [-20708.405] (-20711.895) (-20705.040) (-20711.284) -- 0:45:32
215000 -- (-20710.956) [-20699.267] (-20702.123) (-20700.942) * (-20705.101) (-20702.992) [-20707.995] (-20718.340) -- 0:45:27
Average standard deviation of split frequencies: 0.014550
216000 -- [-20704.589] (-20710.413) (-20712.528) (-20706.728) * [-20702.039] (-20704.855) (-20709.677) (-20699.950) -- 0:45:25
217000 -- (-20704.291) (-20707.166) (-20710.728) [-20707.003] * (-20715.322) (-20711.989) (-20723.787) [-20699.800] -- 0:45:24
218000 -- [-20705.397] (-20717.925) (-20703.811) (-20710.760) * [-20705.127] (-20699.365) (-20719.320) (-20714.216) -- 0:45:19
219000 -- (-20707.940) (-20706.117) [-20705.589] (-20712.760) * (-20705.179) (-20709.613) [-20708.338] (-20715.156) -- 0:45:17
220000 -- (-20701.992) (-20711.256) [-20706.323] (-20713.198) * (-20708.205) (-20710.385) [-20701.466] (-20706.255) -- 0:45:12
Average standard deviation of split frequencies: 0.013767
221000 -- (-20710.452) (-20712.538) (-20706.967) [-20702.464] * [-20712.013] (-20707.155) (-20704.513) (-20702.256) -- 0:45:10
222000 -- (-20707.998) (-20708.408) (-20707.525) [-20715.718] * (-20709.438) (-20709.205) (-20708.836) [-20703.665] -- 0:45:05
223000 -- (-20706.947) (-20706.732) (-20702.840) [-20705.154] * (-20700.896) [-20701.505] (-20707.642) (-20711.252) -- 0:45:03
224000 -- (-20708.145) (-20705.928) [-20706.849] (-20706.753) * (-20708.911) (-20705.422) [-20707.360] (-20705.713) -- 0:44:58
225000 -- (-20707.833) (-20703.075) [-20701.024] (-20707.870) * (-20712.542) (-20712.235) [-20703.916] (-20708.946) -- 0:44:57
Average standard deviation of split frequencies: 0.013906
226000 -- [-20703.238] (-20706.238) (-20709.569) (-20717.882) * (-20715.032) (-20712.604) [-20701.302] (-20712.506) -- 0:44:51
227000 -- (-20709.289) (-20708.836) [-20700.821] (-20707.205) * [-20711.712] (-20703.487) (-20704.829) (-20700.331) -- 0:44:50
228000 -- (-20712.843) (-20707.740) [-20707.890] (-20705.467) * (-20711.764) (-20707.883) [-20711.198] (-20715.625) -- 0:44:45
229000 -- (-20700.386) (-20705.536) [-20712.250] (-20705.248) * (-20708.119) (-20706.125) [-20703.827] (-20706.884) -- 0:44:43
230000 -- [-20707.621] (-20712.156) (-20717.964) (-20717.578) * [-20712.885] (-20707.751) (-20710.767) (-20720.928) -- 0:44:38
Average standard deviation of split frequencies: 0.013624
231000 -- (-20709.112) [-20704.359] (-20704.964) (-20705.899) * [-20708.947] (-20709.089) (-20712.201) (-20715.081) -- 0:44:36
232000 -- (-20708.985) (-20704.749) (-20712.891) [-20703.251] * (-20711.034) [-20703.040] (-20704.785) (-20703.714) -- 0:44:31
233000 -- (-20708.464) (-20713.333) (-20708.157) [-20702.631] * (-20711.241) [-20700.735] (-20714.844) (-20708.645) -- 0:44:29
234000 -- (-20707.403) (-20710.648) [-20705.865] (-20714.452) * (-20706.416) (-20714.449) [-20708.090] (-20704.261) -- 0:44:24
235000 -- [-20708.217] (-20704.582) (-20705.419) (-20713.363) * (-20714.540) [-20706.648] (-20702.132) (-20708.104) -- 0:44:22
Average standard deviation of split frequencies: 0.013760
236000 -- (-20712.408) (-20715.647) [-20713.517] (-20709.191) * (-20723.787) [-20707.644] (-20708.960) (-20712.894) -- 0:44:17
237000 -- (-20707.890) (-20710.480) [-20701.056] (-20704.160) * (-20706.877) [-20701.308] (-20702.119) (-20715.766) -- 0:44:12
238000 -- (-20711.603) [-20704.204] (-20706.504) (-20707.636) * [-20707.402] (-20701.270) (-20707.413) (-20718.534) -- 0:44:10
239000 -- (-20706.971) (-20706.525) (-20709.408) [-20708.152] * [-20704.061] (-20709.666) (-20710.249) (-20708.790) -- 0:44:05
240000 -- (-20708.535) (-20706.065) [-20714.692] (-20711.687) * (-20708.131) (-20719.857) [-20701.223] (-20723.577) -- 0:44:04
Average standard deviation of split frequencies: 0.012623
241000 -- [-20704.074] (-20710.950) (-20708.061) (-20705.994) * (-20707.028) (-20710.357) (-20708.955) [-20708.520] -- 0:43:59
242000 -- [-20711.413] (-20717.749) (-20704.317) (-20704.082) * (-20710.727) [-20707.958] (-20708.828) (-20704.513) -- 0:43:57
243000 -- (-20712.505) (-20712.479) (-20712.933) [-20701.506] * [-20703.602] (-20719.750) (-20704.786) (-20714.480) -- 0:43:52
244000 -- (-20707.334) (-20708.754) [-20705.639] (-20716.680) * (-20714.613) (-20704.150) [-20702.854] (-20710.423) -- 0:43:50
245000 -- (-20717.439) [-20703.233] (-20706.853) (-20705.352) * (-20712.910) [-20700.747] (-20708.074) (-20708.922) -- 0:43:45
Average standard deviation of split frequencies: 0.011924
246000 -- (-20706.225) (-20705.422) [-20701.076] (-20714.818) * (-20709.627) (-20708.740) [-20713.069] (-20717.484) -- 0:43:43
247000 -- (-20712.700) [-20697.676] (-20710.689) (-20709.997) * (-20706.028) (-20707.873) [-20709.448] (-20709.970) -- 0:43:38
248000 -- [-20702.613] (-20704.999) (-20718.246) (-20715.129) * (-20716.880) [-20706.822] (-20703.505) (-20716.014) -- 0:43:36
249000 -- (-20703.295) (-20716.806) [-20717.518] (-20710.859) * (-20705.267) (-20707.281) [-20711.059] (-20706.193) -- 0:43:31
250000 -- [-20710.665] (-20705.858) (-20716.188) (-20707.750) * (-20715.416) (-20704.803) [-20703.232] (-20704.612) -- 0:43:30
Average standard deviation of split frequencies: 0.012955
251000 -- (-20711.946) (-20704.062) (-20704.671) [-20703.664] * (-20714.508) [-20706.275] (-20712.365) (-20712.781) -- 0:43:25
252000 -- (-20704.611) (-20713.183) (-20705.471) [-20707.603] * (-20713.010) [-20701.731] (-20705.040) (-20714.374) -- 0:43:23
253000 -- (-20718.417) [-20702.813] (-20714.134) (-20704.850) * [-20717.379] (-20708.337) (-20707.407) (-20702.176) -- 0:43:18
254000 -- (-20708.264) [-20702.974] (-20707.476) (-20711.119) * [-20709.561] (-20710.967) (-20710.801) (-20709.577) -- 0:43:16
255000 -- [-20704.357] (-20715.215) (-20707.281) (-20707.758) * [-20706.855] (-20706.026) (-20707.632) (-20712.439) -- 0:43:11
Average standard deviation of split frequencies: 0.013095
256000 -- (-20712.730) (-20707.344) [-20705.599] (-20701.360) * (-20708.645) (-20709.613) [-20703.882] (-20705.387) -- 0:43:09
257000 -- (-20716.337) [-20703.790] (-20712.398) (-20703.179) * (-20711.282) [-20710.614] (-20709.006) (-20713.646) -- 0:43:04
258000 -- (-20706.662) (-20710.831) (-20707.925) [-20701.351] * (-20710.902) (-20717.597) [-20704.401] (-20708.399) -- 0:43:02
259000 -- (-20708.113) [-20702.475] (-20715.874) (-20706.328) * [-20704.828] (-20705.858) (-20709.585) (-20713.411) -- 0:42:57
260000 -- (-20712.360) [-20705.409] (-20711.672) (-20715.399) * [-20706.917] (-20707.846) (-20716.701) (-20702.539) -- 0:42:55
Average standard deviation of split frequencies: 0.011655
261000 -- [-20705.691] (-20708.490) (-20705.974) (-20718.482) * (-20712.735) [-20704.394] (-20709.938) (-20718.270) -- 0:42:50
262000 -- (-20711.433) [-20705.057] (-20706.627) (-20711.145) * (-20707.445) (-20703.270) (-20703.978) [-20706.249] -- 0:42:48
263000 -- (-20709.328) (-20708.580) (-20702.538) [-20712.468] * (-20708.227) (-20704.256) [-20702.278] (-20706.313) -- 0:42:44
264000 -- [-20712.489] (-20708.391) (-20704.971) (-20719.603) * (-20711.653) (-20710.814) (-20704.386) [-20702.740] -- 0:42:42
265000 -- (-20703.681) (-20708.007) [-20707.133] (-20713.667) * (-20705.552) (-20703.535) (-20718.590) [-20711.969] -- 0:42:37
Average standard deviation of split frequencies: 0.011027
266000 -- [-20711.190] (-20711.115) (-20712.256) (-20719.695) * (-20707.937) (-20717.254) (-20708.898) [-20707.416] -- 0:42:35
267000 -- [-20709.841] (-20704.562) (-20705.877) (-20709.336) * (-20713.687) (-20713.357) [-20709.566] (-20708.837) -- 0:42:30
268000 -- (-20712.770) [-20704.078] (-20709.027) (-20705.852) * (-20708.600) (-20707.175) (-20712.995) [-20706.189] -- 0:42:28
269000 -- [-20707.120] (-20715.749) (-20703.068) (-20703.974) * (-20717.752) [-20704.989] (-20709.013) (-20712.999) -- 0:42:23
270000 -- (-20703.903) (-20715.148) [-20712.272] (-20714.263) * (-20711.613) [-20711.088] (-20706.828) (-20708.654) -- 0:42:21
Average standard deviation of split frequencies: 0.011611
271000 -- [-20702.125] (-20711.460) (-20708.483) (-20709.183) * (-20708.010) (-20710.994) [-20721.026] (-20705.885) -- 0:42:16
272000 -- [-20705.917] (-20712.008) (-20706.762) (-20708.046) * (-20713.773) [-20707.212] (-20709.183) (-20712.066) -- 0:42:14
273000 -- (-20703.009) (-20704.613) (-20709.140) [-20701.715] * (-20706.372) (-20713.252) (-20711.247) [-20708.453] -- 0:42:09
274000 -- (-20717.653) (-20706.668) (-20709.840) [-20704.040] * [-20709.819] (-20711.606) (-20709.313) (-20706.463) -- 0:42:07
275000 -- (-20705.980) (-20709.463) [-20708.604] (-20705.504) * (-20714.973) [-20705.225] (-20716.034) (-20718.788) -- 0:42:03
Average standard deviation of split frequencies: 0.011007
276000 -- (-20710.312) (-20704.253) [-20704.404] (-20706.317) * (-20717.220) (-20714.522) [-20709.184] (-20713.821) -- 0:42:00
277000 -- (-20714.098) (-20705.674) [-20702.841] (-20718.994) * [-20707.111] (-20714.340) (-20706.835) (-20718.435) -- 0:41:56
278000 -- [-20701.379] (-20708.521) (-20720.738) (-20717.047) * [-20704.410] (-20716.266) (-20709.557) (-20712.349) -- 0:41:54
279000 -- (-20713.736) [-20710.692] (-20703.209) (-20706.880) * (-20707.064) [-20706.840] (-20707.733) (-20717.656) -- 0:41:49
280000 -- (-20704.828) [-20706.119] (-20710.859) (-20714.993) * (-20707.396) (-20702.434) [-20705.650] (-20722.253) -- 0:41:47
Average standard deviation of split frequencies: 0.011197
281000 -- [-20705.532] (-20720.637) (-20700.849) (-20709.737) * (-20710.713) (-20715.896) [-20704.770] (-20705.066) -- 0:41:42
282000 -- (-20708.250) (-20718.156) (-20706.787) [-20704.095] * (-20705.692) (-20717.535) (-20702.125) [-20702.389] -- 0:41:37
283000 -- [-20708.798] (-20705.550) (-20709.844) (-20706.696) * [-20703.246] (-20718.519) (-20703.886) (-20700.123) -- 0:41:35
284000 -- (-20706.136) [-20702.405] (-20710.741) (-20711.823) * (-20707.823) (-20712.876) (-20709.087) [-20701.866] -- 0:41:30
285000 -- (-20707.638) (-20708.149) [-20712.670] (-20713.613) * [-20710.438] (-20715.506) (-20709.210) (-20708.714) -- 0:41:28
Average standard deviation of split frequencies: 0.011355
286000 -- [-20706.197] (-20706.552) (-20709.711) (-20706.982) * (-20710.746) (-20710.997) (-20713.991) [-20707.549] -- 0:41:24
287000 -- [-20701.593] (-20710.311) (-20706.113) (-20703.855) * (-20704.461) (-20707.200) [-20710.354] (-20709.848) -- 0:41:21
288000 -- (-20710.939) [-20705.421] (-20709.495) (-20703.913) * [-20710.243] (-20712.415) (-20707.468) (-20704.765) -- 0:41:17
289000 -- (-20713.232) (-20729.428) [-20700.151] (-20708.840) * (-20703.659) (-20714.203) [-20700.370] (-20701.487) -- 0:41:14
290000 -- [-20699.100] (-20711.074) (-20709.390) (-20710.451) * (-20706.197) (-20713.006) [-20708.748] (-20703.219) -- 0:41:10
Average standard deviation of split frequencies: 0.011893
291000 -- (-20702.704) (-20710.979) (-20703.594) [-20704.403] * (-20704.523) (-20716.794) (-20717.761) [-20702.361] -- 0:41:08
292000 -- [-20710.691] (-20706.219) (-20703.368) (-20714.918) * [-20705.132] (-20718.118) (-20714.456) (-20711.045) -- 0:41:03
293000 -- (-20716.229) [-20714.338] (-20707.069) (-20714.305) * (-20706.826) [-20709.304] (-20721.996) (-20710.214) -- 0:41:01
294000 -- (-20706.517) [-20707.102] (-20704.069) (-20724.998) * (-20714.030) (-20715.622) (-20713.384) [-20705.442] -- 0:40:56
295000 -- [-20709.199] (-20707.719) (-20710.500) (-20706.115) * [-20708.511] (-20711.892) (-20708.171) (-20710.022) -- 0:40:54
Average standard deviation of split frequencies: 0.010971
296000 -- (-20703.156) (-20701.176) [-20707.956] (-20708.542) * [-20706.131] (-20714.259) (-20703.994) (-20709.675) -- 0:40:49
297000 -- (-20712.881) (-20704.003) [-20706.161] (-20711.040) * (-20703.615) (-20707.235) [-20707.524] (-20719.041) -- 0:40:47
298000 -- (-20711.313) (-20708.719) (-20697.470) [-20702.534] * (-20718.751) (-20716.183) [-20705.052] (-20718.325) -- 0:40:42
299000 -- (-20707.395) [-20700.619] (-20718.250) (-20709.258) * (-20708.871) (-20711.614) (-20706.829) [-20714.324] -- 0:40:40
300000 -- (-20708.400) (-20711.814) [-20709.270] (-20716.794) * (-20710.674) (-20714.665) [-20705.593] (-20710.914) -- 0:40:36
Average standard deviation of split frequencies: 0.010801
301000 -- [-20703.807] (-20705.817) (-20708.841) (-20714.151) * (-20707.607) (-20714.212) (-20708.731) [-20711.391] -- 0:40:33
302000 -- (-20711.685) (-20710.418) [-20703.122] (-20707.458) * (-20706.015) [-20701.492] (-20708.301) (-20717.410) -- 0:40:29
303000 -- (-20712.717) (-20709.054) (-20707.721) [-20713.120] * (-20716.089) (-20707.716) (-20700.632) [-20705.360] -- 0:40:26
304000 -- (-20699.820) (-20712.667) [-20710.839] (-20710.229) * (-20709.736) (-20713.990) (-20707.970) [-20706.849] -- 0:40:22
305000 -- [-20712.412] (-20710.273) (-20707.979) (-20709.260) * (-20705.800) (-20710.599) (-20716.045) [-20707.157] -- 0:40:17
Average standard deviation of split frequencies: 0.009586
306000 -- (-20721.169) (-20706.119) (-20719.250) [-20699.178] * (-20712.147) (-20715.206) (-20710.296) [-20703.975] -- 0:40:15
307000 -- (-20725.076) (-20709.460) [-20711.647] (-20714.089) * (-20720.016) [-20708.721] (-20711.698) (-20709.936) -- 0:40:13
308000 -- (-20709.526) (-20708.935) [-20702.710] (-20710.237) * (-20705.123) (-20706.064) [-20708.378] (-20700.157) -- 0:40:08
309000 -- [-20701.949] (-20715.720) (-20710.372) (-20706.085) * (-20710.459) (-20706.572) [-20703.477] (-20716.649) -- 0:40:06
310000 -- (-20708.426) [-20711.752] (-20705.174) (-20708.468) * (-20708.909) (-20718.768) (-20709.833) [-20715.061] -- 0:40:01
Average standard deviation of split frequencies: 0.008430
311000 -- (-20704.075) (-20708.157) [-20699.459] (-20702.713) * [-20706.808] (-20709.861) (-20709.151) (-20709.403) -- 0:39:59
312000 -- (-20706.488) (-20715.466) [-20702.777] (-20706.817) * (-20709.498) (-20708.168) (-20711.806) [-20704.248] -- 0:39:54
313000 -- (-20708.721) (-20704.108) [-20703.290] (-20706.898) * (-20704.382) [-20717.788] (-20707.169) (-20705.547) -- 0:39:52
314000 -- (-20709.772) (-20713.412) (-20712.126) [-20705.171] * (-20712.414) [-20707.079] (-20708.174) (-20710.413) -- 0:39:47
315000 -- [-20708.742] (-20712.871) (-20716.765) (-20716.498) * (-20726.841) (-20705.666) [-20705.727] (-20709.536) -- 0:39:45
Average standard deviation of split frequencies: 0.008951
316000 -- (-20704.582) [-20701.751] (-20708.511) (-20715.972) * [-20704.303] (-20704.110) (-20710.684) (-20706.120) -- 0:39:41
317000 -- (-20708.482) [-20706.285] (-20703.278) (-20701.855) * [-20715.766] (-20706.604) (-20709.437) (-20709.511) -- 0:39:38
318000 -- (-20708.365) (-20701.213) (-20714.298) [-20706.931] * (-20710.718) (-20709.162) [-20715.578] (-20711.980) -- 0:39:34
319000 -- (-20711.455) [-20707.358] (-20708.570) (-20714.255) * (-20715.161) (-20708.925) [-20726.995] (-20726.682) -- 0:39:31
320000 -- (-20704.488) (-20708.847) [-20705.373] (-20709.770) * (-20705.438) [-20705.619] (-20709.993) (-20704.859) -- 0:39:27
Average standard deviation of split frequencies: 0.009474
321000 -- (-20703.840) (-20703.873) [-20706.310] (-20712.944) * (-20714.897) (-20710.838) [-20714.291] (-20705.570) -- 0:39:24
322000 -- (-20722.018) (-20705.882) (-20712.985) [-20708.556] * (-20706.441) [-20705.452] (-20713.379) (-20711.275) -- 0:39:20
323000 -- (-20711.672) [-20709.068] (-20707.207) (-20704.986) * (-20712.265) [-20702.829] (-20709.467) (-20703.136) -- 0:39:17
324000 -- [-20707.561] (-20705.665) (-20707.788) (-20707.205) * (-20704.748) [-20701.653] (-20715.750) (-20710.848) -- 0:39:13
325000 -- (-20707.616) (-20701.480) [-20707.504] (-20704.430) * [-20704.410] (-20703.045) (-20712.410) (-20708.967) -- 0:39:11
Average standard deviation of split frequencies: 0.009640
326000 -- (-20714.399) [-20702.170] (-20706.595) (-20712.129) * (-20700.806) (-20721.006) (-20707.959) [-20714.871] -- 0:39:06
327000 -- (-20707.789) (-20708.830) (-20714.302) [-20708.360] * (-20714.172) [-20707.393] (-20712.824) (-20716.866) -- 0:39:04
328000 -- [-20706.464] (-20708.642) (-20711.592) (-20702.242) * (-20712.311) [-20704.784] (-20712.002) (-20712.453) -- 0:38:59
329000 -- [-20702.957] (-20711.199) (-20714.640) (-20710.634) * (-20718.365) [-20712.433] (-20707.314) (-20713.974) -- 0:38:57
330000 -- [-20700.186] (-20716.020) (-20722.700) (-20704.073) * (-20723.327) (-20710.229) [-20709.518] (-20715.371) -- 0:38:52
Average standard deviation of split frequencies: 0.009504
331000 -- (-20712.690) (-20707.436) [-20710.793] (-20703.779) * [-20716.762] (-20706.911) (-20710.818) (-20714.837) -- 0:38:50
332000 -- (-20706.912) [-20700.743] (-20704.717) (-20708.960) * (-20712.731) (-20714.206) (-20708.324) [-20704.872] -- 0:38:45
333000 -- (-20715.217) (-20710.467) [-20711.459] (-20701.015) * (-20717.770) (-20705.115) [-20706.777] (-20704.926) -- 0:38:43
334000 -- (-20719.805) [-20706.692] (-20706.992) (-20713.325) * [-20705.060] (-20707.021) (-20706.053) (-20704.131) -- 0:38:39
335000 -- (-20707.227) [-20701.041] (-20710.480) (-20708.108) * (-20706.788) (-20710.260) [-20707.700] (-20713.089) -- 0:38:36
Average standard deviation of split frequencies: 0.009665
336000 -- (-20710.106) [-20712.556] (-20713.968) (-20707.168) * (-20708.333) (-20706.568) (-20704.867) [-20704.985] -- 0:38:32
337000 -- (-20699.909) (-20713.464) (-20708.476) [-20709.122] * (-20710.120) (-20709.597) (-20711.425) [-20713.626] -- 0:38:29
338000 -- (-20704.796) [-20702.337] (-20701.128) (-20703.692) * (-20715.415) [-20704.052] (-20705.746) (-20710.861) -- 0:38:25
339000 -- (-20710.457) (-20706.191) (-20712.254) [-20705.317] * [-20704.844] (-20704.906) (-20711.029) (-20705.063) -- 0:38:22
340000 -- (-20706.062) [-20703.161] (-20719.904) (-20713.003) * (-20711.158) (-20709.389) (-20707.630) [-20709.284] -- 0:38:18
Average standard deviation of split frequencies: 0.008610
341000 -- [-20712.088] (-20703.973) (-20710.361) (-20711.998) * (-20708.070) (-20721.184) (-20721.599) [-20707.762] -- 0:38:15
342000 -- (-20713.665) (-20711.468) (-20705.597) [-20704.132] * [-20701.326] (-20714.825) (-20721.976) (-20707.625) -- 0:38:11
343000 -- (-20714.722) [-20703.885] (-20709.850) (-20718.293) * [-20704.706] (-20713.176) (-20707.031) (-20708.044) -- 0:38:08
344000 -- [-20710.178] (-20702.487) (-20709.579) (-20728.633) * (-20707.502) (-20706.254) (-20711.385) [-20714.792] -- 0:38:04
345000 -- (-20710.627) (-20715.263) (-20720.673) [-20713.340] * [-20704.435] (-20709.220) (-20705.850) (-20700.590) -- 0:38:02
Average standard deviation of split frequencies: 0.007872
346000 -- (-20704.530) (-20708.130) (-20710.414) [-20712.739] * (-20711.692) (-20708.897) (-20706.635) [-20705.856] -- 0:37:57
347000 -- (-20709.078) [-20697.876] (-20707.804) (-20709.258) * (-20702.924) (-20711.300) [-20705.562] (-20706.637) -- 0:37:55
348000 -- (-20709.101) (-20707.627) [-20705.748] (-20705.810) * (-20709.937) (-20705.935) [-20702.889] (-20702.448) -- 0:37:50
349000 -- (-20715.344) (-20707.846) (-20715.606) [-20715.703] * (-20712.637) (-20717.246) [-20704.896] (-20705.190) -- 0:37:48
350000 -- (-20705.969) (-20714.243) (-20716.033) [-20710.417] * (-20718.353) (-20711.488) [-20706.913] (-20715.272) -- 0:37:43
Average standard deviation of split frequencies: 0.006871
351000 -- [-20709.892] (-20710.663) (-20712.644) (-20709.651) * (-20707.056) (-20713.140) [-20713.469] (-20715.491) -- 0:37:41
352000 -- (-20703.814) [-20708.274] (-20712.466) (-20715.330) * [-20702.686] (-20711.813) (-20706.444) (-20706.437) -- 0:37:36
353000 -- (-20700.716) (-20705.969) (-20707.554) [-20708.365] * (-20701.977) [-20702.943] (-20713.799) (-20712.425) -- 0:37:34
354000 -- [-20704.676] (-20705.407) (-20707.740) (-20712.416) * (-20718.977) (-20710.973) (-20704.519) [-20709.032] -- 0:37:30
355000 -- (-20711.697) (-20717.570) [-20704.370] (-20715.840) * (-20702.906) [-20709.335] (-20709.143) (-20716.481) -- 0:37:27
Average standard deviation of split frequencies: 0.006474
356000 -- (-20708.266) (-20711.494) [-20703.411] (-20713.777) * [-20709.710] (-20710.361) (-20705.089) (-20710.155) -- 0:37:23
357000 -- (-20711.703) (-20714.482) (-20712.007) [-20705.096] * (-20705.850) (-20712.278) [-20700.097] (-20709.669) -- 0:37:20
358000 -- (-20709.755) [-20703.111] (-20707.610) (-20709.957) * (-20708.166) (-20708.948) [-20708.148] (-20706.721) -- 0:37:16
359000 -- (-20701.985) (-20701.225) [-20705.508] (-20710.396) * [-20699.414] (-20710.732) (-20711.864) (-20711.789) -- 0:37:13
360000 -- [-20703.533] (-20714.766) (-20702.762) (-20706.775) * (-20711.290) (-20714.175) (-20708.460) [-20703.597] -- 0:37:09
Average standard deviation of split frequencies: 0.006680
361000 -- (-20703.205) (-20707.966) [-20708.207] (-20706.333) * [-20708.033] (-20711.730) (-20713.422) (-20712.358) -- 0:37:06
362000 -- (-20707.212) [-20708.295] (-20707.302) (-20705.999) * [-20699.711] (-20709.290) (-20705.886) (-20707.919) -- 0:37:02
363000 -- (-20716.130) [-20697.915] (-20700.237) (-20706.154) * (-20706.937) (-20704.186) (-20707.506) [-20711.605] -- 0:36:59
364000 -- (-20713.447) [-20704.592] (-20710.358) (-20706.409) * (-20704.482) [-20702.150] (-20699.765) (-20717.151) -- 0:36:55
365000 -- (-20704.429) [-20702.866] (-20716.731) (-20710.594) * (-20713.633) (-20708.381) (-20703.414) [-20710.195] -- 0:36:52
Average standard deviation of split frequencies: 0.007442
366000 -- (-20715.303) (-20709.277) [-20709.038] (-20699.362) * (-20721.667) [-20703.957] (-20707.307) (-20699.835) -- 0:36:48
367000 -- [-20718.572] (-20713.680) (-20715.425) (-20705.527) * (-20720.480) (-20707.837) (-20710.049) [-20703.080] -- 0:36:46
368000 -- (-20715.772) [-20707.294] (-20709.548) (-20705.147) * (-20703.476) [-20702.090] (-20705.778) (-20705.567) -- 0:36:41
369000 -- (-20715.456) (-20716.857) [-20709.723] (-20705.136) * [-20706.914] (-20717.195) (-20716.736) (-20708.824) -- 0:36:37
370000 -- (-20714.891) [-20708.518] (-20704.395) (-20709.148) * [-20698.786] (-20708.186) (-20709.536) (-20709.302) -- 0:36:34
Average standard deviation of split frequencies: 0.007348
371000 -- [-20704.472] (-20723.083) (-20703.023) (-20712.031) * (-20708.389) [-20704.840] (-20702.128) (-20700.819) -- 0:36:30
372000 -- [-20709.529] (-20726.689) (-20710.496) (-20701.090) * (-20709.127) (-20703.103) [-20707.452] (-20704.328) -- 0:36:27
373000 -- (-20719.127) (-20716.274) [-20707.796] (-20710.401) * [-20708.984] (-20712.855) (-20707.086) (-20699.400) -- 0:36:23
374000 -- [-20700.759] (-20709.378) (-20711.451) (-20721.168) * (-20710.650) (-20707.339) (-20709.741) [-20703.365] -- 0:36:20
375000 -- (-20708.216) (-20704.273) [-20710.567] (-20713.383) * (-20705.823) (-20717.279) (-20705.177) [-20705.217] -- 0:36:18
Average standard deviation of split frequencies: 0.007522
376000 -- (-20703.100) (-20718.668) (-20705.736) [-20708.829] * (-20708.844) (-20702.158) (-20709.637) [-20701.196] -- 0:36:14
377000 -- [-20707.560] (-20702.757) (-20712.889) (-20705.732) * (-20708.497) [-20709.806] (-20711.881) (-20709.725) -- 0:36:11
378000 -- (-20717.112) (-20711.076) [-20700.327] (-20708.667) * [-20702.192] (-20705.482) (-20703.448) (-20716.378) -- 0:36:07
379000 -- [-20706.701] (-20705.528) (-20715.762) (-20705.765) * (-20715.226) [-20704.933] (-20707.380) (-20703.300) -- 0:36:04
380000 -- (-20706.419) [-20704.427] (-20709.371) (-20711.524) * (-20713.850) (-20704.022) (-20714.548) [-20703.557] -- 0:36:00
Average standard deviation of split frequencies: 0.007981
381000 -- [-20699.064] (-20702.889) (-20706.895) (-20704.492) * (-20702.674) (-20707.805) (-20703.050) [-20703.497] -- 0:35:55
382000 -- [-20705.868] (-20709.987) (-20719.295) (-20703.719) * (-20710.290) (-20713.496) (-20706.377) [-20714.794] -- 0:35:53
383000 -- (-20703.507) (-20711.447) (-20704.112) [-20704.294] * (-20707.629) [-20702.974] (-20703.840) (-20704.038) -- 0:35:49
384000 -- (-20702.604) (-20711.464) (-20709.493) [-20708.138] * (-20708.487) (-20704.517) [-20705.247] (-20709.544) -- 0:35:46
385000 -- [-20703.839] (-20705.184) (-20704.651) (-20700.477) * (-20705.745) (-20709.834) (-20709.608) [-20703.521] -- 0:35:42
Average standard deviation of split frequencies: 0.008142
386000 -- (-20705.504) (-20712.245) (-20712.359) [-20703.353] * (-20711.256) [-20714.083] (-20706.958) (-20708.032) -- 0:35:39
387000 -- (-20702.263) (-20713.734) (-20710.085) [-20707.030] * (-20710.546) (-20712.424) (-20714.188) [-20704.314] -- 0:35:35
388000 -- (-20723.349) (-20703.534) (-20709.374) [-20705.429] * (-20705.438) (-20717.142) (-20709.218) [-20709.271] -- 0:35:32
389000 -- [-20708.319] (-20716.327) (-20709.713) (-20704.102) * (-20700.429) (-20713.896) (-20698.131) [-20708.578] -- 0:35:28
390000 -- [-20703.981] (-20703.618) (-20709.816) (-20706.975) * (-20712.913) (-20716.654) [-20702.815] (-20702.653) -- 0:35:25
Average standard deviation of split frequencies: 0.008044
391000 -- (-20707.637) (-20710.304) [-20709.229] (-20703.816) * (-20706.665) (-20708.215) [-20701.434] (-20706.973) -- 0:35:21
392000 -- (-20704.734) [-20708.893] (-20711.041) (-20703.617) * (-20707.656) [-20706.795] (-20706.501) (-20702.417) -- 0:35:18
393000 -- (-20713.255) [-20708.642] (-20710.858) (-20705.658) * (-20707.390) (-20713.788) (-20710.756) [-20711.926] -- 0:35:14
394000 -- [-20709.648] (-20705.383) (-20707.274) (-20718.487) * [-20707.215] (-20722.279) (-20704.894) (-20718.265) -- 0:35:11
395000 -- (-20705.856) (-20706.151) (-20709.180) [-20709.065] * [-20703.793] (-20716.377) (-20716.124) (-20708.012) -- 0:35:07
Average standard deviation of split frequencies: 0.007936
396000 -- (-20710.327) (-20700.950) [-20703.202] (-20705.682) * (-20705.104) (-20707.820) (-20708.582) [-20703.304] -- 0:35:04
397000 -- [-20708.200] (-20719.994) (-20710.930) (-20700.265) * (-20709.902) (-20704.212) [-20712.768] (-20713.363) -- 0:35:00
398000 -- (-20712.837) (-20723.045) (-20717.567) [-20709.897] * (-20712.517) [-20715.543] (-20709.888) (-20708.544) -- 0:34:57
399000 -- [-20707.874] (-20709.828) (-20709.808) (-20714.803) * (-20705.867) (-20711.349) [-20702.795] (-20707.688) -- 0:34:53
400000 -- [-20710.717] (-20708.528) (-20704.538) (-20699.956) * (-20698.724) [-20709.540] (-20714.414) (-20713.084) -- 0:34:51
Average standard deviation of split frequencies: 0.008367
401000 -- [-20706.795] (-20708.966) (-20709.844) (-20715.305) * [-20702.546] (-20706.472) (-20713.568) (-20719.638) -- 0:34:46
402000 -- (-20710.589) (-20705.806) [-20709.693] (-20712.212) * (-20708.227) [-20707.865] (-20710.108) (-20703.147) -- 0:34:44
403000 -- (-20711.506) [-20706.386] (-20720.172) (-20715.678) * [-20711.001] (-20713.181) (-20706.147) (-20711.973) -- 0:34:39
404000 -- (-20714.077) [-20708.305] (-20715.086) (-20703.907) * (-20718.771) (-20705.615) [-20702.110] (-20711.521) -- 0:34:37
405000 -- [-20705.912] (-20709.552) (-20705.865) (-20705.027) * (-20708.715) [-20704.277] (-20707.180) (-20713.501) -- 0:34:32
Average standard deviation of split frequencies: 0.008257
406000 -- (-20712.166) (-20707.518) [-20711.625] (-20714.100) * [-20700.450] (-20709.618) (-20701.835) (-20712.684) -- 0:34:30
407000 -- [-20706.570] (-20698.389) (-20705.792) (-20714.180) * [-20707.749] (-20711.883) (-20711.666) (-20707.154) -- 0:34:26
408000 -- (-20706.903) (-20707.242) [-20712.903] (-20718.609) * (-20710.863) (-20706.535) [-20700.935] (-20708.291) -- 0:34:23
409000 -- (-20710.947) [-20703.908] (-20709.941) (-20713.701) * [-20699.071] (-20707.970) (-20711.011) (-20705.778) -- 0:34:19
410000 -- (-20708.790) (-20703.910) [-20705.293] (-20711.154) * (-20707.458) [-20713.366] (-20706.543) (-20720.901) -- 0:34:16
Average standard deviation of split frequencies: 0.007653
411000 -- [-20703.019] (-20705.006) (-20706.801) (-20718.073) * (-20708.610) (-20711.689) [-20711.356] (-20714.533) -- 0:34:12
412000 -- (-20713.627) [-20716.425] (-20706.403) (-20710.235) * (-20721.073) [-20704.023] (-20705.726) (-20711.291) -- 0:34:09
413000 -- [-20704.723] (-20707.690) (-20714.721) (-20713.300) * (-20711.728) [-20704.107] (-20707.139) (-20718.695) -- 0:34:05
414000 -- (-20708.141) (-20709.888) (-20711.624) [-20708.154] * (-20718.140) (-20702.691) [-20701.820] (-20709.789) -- 0:34:02
415000 -- (-20711.818) (-20714.888) [-20702.383] (-20707.783) * (-20704.725) (-20705.401) (-20706.709) [-20710.707] -- 0:33:58
Average standard deviation of split frequencies: 0.007555
416000 -- (-20726.468) (-20711.028) (-20709.826) [-20708.733] * [-20702.748] (-20703.264) (-20718.411) (-20709.972) -- 0:33:55
417000 -- (-20714.541) (-20705.123) [-20706.464] (-20714.668) * (-20702.213) (-20706.100) (-20716.686) [-20701.009] -- 0:33:51
418000 -- [-20707.568] (-20704.431) (-20706.836) (-20710.167) * (-20706.891) (-20712.686) (-20719.393) [-20707.465] -- 0:33:48
419000 -- [-20705.539] (-20706.181) (-20704.786) (-20715.203) * (-20710.158) (-20702.003) (-20711.447) [-20704.003] -- 0:33:44
420000 -- (-20716.007) [-20712.363] (-20701.486) (-20714.663) * (-20717.171) (-20715.112) [-20699.952] (-20703.570) -- 0:33:41
Average standard deviation of split frequencies: 0.007222
421000 -- [-20713.141] (-20707.230) (-20712.574) (-20715.789) * (-20706.984) (-20704.972) [-20708.943] (-20705.982) -- 0:33:37
422000 -- [-20705.332] (-20711.480) (-20714.773) (-20707.914) * [-20700.244] (-20705.480) (-20708.170) (-20705.755) -- 0:33:34
423000 -- (-20716.163) (-20713.272) [-20705.624] (-20712.113) * (-20701.997) (-20719.576) (-20715.405) [-20705.387] -- 0:33:30
424000 -- (-20705.064) (-20704.253) (-20707.885) [-20712.066] * (-20705.448) (-20706.112) [-20711.400] (-20716.603) -- 0:33:27
425000 -- [-20700.679] (-20710.549) (-20705.968) (-20702.029) * (-20710.667) (-20708.138) [-20706.353] (-20713.150) -- 0:33:23
Average standard deviation of split frequencies: 0.006640
426000 -- (-20710.101) (-20704.073) [-20701.852] (-20703.072) * (-20705.160) (-20703.664) (-20703.699) [-20703.212] -- 0:33:20
427000 -- (-20713.392) (-20710.081) (-20710.300) [-20710.996] * (-20710.671) [-20708.354] (-20705.996) (-20720.672) -- 0:33:16
428000 -- (-20708.649) (-20709.103) (-20710.650) [-20711.532] * [-20704.510] (-20706.574) (-20707.121) (-20708.797) -- 0:33:13
429000 -- (-20719.890) (-20709.202) [-20700.860] (-20704.025) * [-20705.459] (-20721.406) (-20711.658) (-20706.837) -- 0:33:09
430000 -- (-20704.586) (-20704.412) (-20711.285) [-20705.733] * (-20714.313) [-20707.528] (-20702.665) (-20707.465) -- 0:33:07
Average standard deviation of split frequencies: 0.007541
431000 -- (-20708.440) [-20700.997] (-20698.376) (-20704.037) * (-20713.973) (-20715.593) [-20701.153] (-20718.624) -- 0:33:02
432000 -- (-20710.048) (-20703.963) (-20705.962) [-20707.526] * (-20719.516) (-20711.265) (-20713.229) [-20706.848] -- 0:32:58
433000 -- (-20710.191) [-20705.398] (-20708.489) (-20708.820) * (-20717.383) (-20706.657) [-20707.598] (-20719.404) -- 0:32:55
434000 -- [-20702.844] (-20702.781) (-20718.553) (-20706.848) * [-20699.443] (-20707.932) (-20706.180) (-20716.316) -- 0:32:51
435000 -- (-20711.057) [-20704.663] (-20720.439) (-20708.520) * (-20707.983) (-20714.975) (-20711.614) [-20707.564] -- 0:32:49
Average standard deviation of split frequencies: 0.007448
436000 -- (-20703.625) [-20701.199] (-20714.135) (-20710.107) * [-20700.931] (-20709.628) (-20713.963) (-20705.867) -- 0:32:44
437000 -- (-20706.620) (-20709.852) [-20707.754] (-20706.753) * (-20708.348) [-20700.594] (-20708.489) (-20713.591) -- 0:32:42
438000 -- (-20709.724) [-20703.895] (-20702.325) (-20711.233) * (-20715.967) (-20704.679) (-20702.808) [-20708.193] -- 0:32:38
439000 -- (-20703.054) (-20708.581) [-20708.787] (-20723.200) * [-20706.281] (-20698.916) (-20703.782) (-20710.545) -- 0:32:35
440000 -- (-20704.738) [-20703.270] (-20707.104) (-20718.929) * (-20711.075) (-20703.693) (-20707.821) [-20697.958] -- 0:32:31
Average standard deviation of split frequencies: 0.007132
441000 -- (-20701.780) (-20705.991) [-20700.771] (-20708.632) * (-20702.963) (-20714.356) [-20707.328] (-20709.860) -- 0:32:28
442000 -- (-20711.609) (-20708.738) [-20708.472] (-20718.426) * (-20711.139) (-20703.302) [-20697.166] (-20709.798) -- 0:32:25
443000 -- (-20719.377) (-20719.148) [-20710.525] (-20702.903) * [-20716.202] (-20705.933) (-20706.379) (-20706.935) -- 0:32:21
444000 -- (-20713.749) (-20708.998) (-20709.173) [-20709.581] * [-20705.523] (-20714.232) (-20710.802) (-20707.055) -- 0:32:18
445000 -- (-20710.992) (-20709.669) [-20707.153] (-20707.970) * (-20710.042) [-20710.646] (-20706.517) (-20709.760) -- 0:32:14
Average standard deviation of split frequencies: 0.007516
446000 -- (-20704.760) [-20707.386] (-20706.504) (-20707.423) * (-20707.562) [-20708.325] (-20714.844) (-20705.093) -- 0:32:11
447000 -- [-20702.308] (-20709.301) (-20706.590) (-20720.301) * (-20706.062) (-20716.479) (-20716.057) [-20705.693] -- 0:32:07
448000 -- (-20705.868) (-20708.806) [-20711.743] (-20703.294) * (-20706.164) [-20703.570] (-20712.201) (-20719.336) -- 0:32:04
449000 -- (-20705.784) (-20705.669) [-20714.154] (-20706.822) * [-20710.798] (-20701.216) (-20711.075) (-20713.601) -- 0:32:00
450000 -- (-20715.967) [-20709.526] (-20710.222) (-20707.108) * (-20709.242) (-20705.942) [-20705.535] (-20713.111) -- 0:31:57
Average standard deviation of split frequencies: 0.007438
451000 -- (-20713.221) [-20703.876] (-20705.367) (-20708.458) * (-20709.288) (-20707.618) [-20700.582] (-20713.239) -- 0:31:53
452000 -- (-20711.340) [-20707.824] (-20705.594) (-20707.061) * (-20705.649) [-20699.757] (-20710.556) (-20709.538) -- 0:31:50
453000 -- (-20720.787) (-20705.906) [-20704.036] (-20711.189) * (-20710.831) (-20703.979) [-20706.796] (-20707.328) -- 0:31:46
454000 -- (-20703.204) [-20706.864] (-20709.855) (-20711.733) * (-20704.805) (-20707.966) (-20710.074) [-20709.519] -- 0:31:43
455000 -- [-20706.858] (-20718.939) (-20706.205) (-20712.560) * (-20715.897) (-20705.545) [-20701.707] (-20705.037) -- 0:31:39
Average standard deviation of split frequencies: 0.008041
456000 -- [-20711.348] (-20706.076) (-20707.968) (-20711.946) * [-20711.964] (-20708.844) (-20720.877) (-20706.044) -- 0:31:36
457000 -- (-20717.231) (-20703.089) (-20706.955) [-20706.449] * (-20713.400) [-20699.920] (-20710.015) (-20702.266) -- 0:31:32
458000 -- (-20718.373) [-20711.959] (-20714.072) (-20712.867) * (-20712.858) [-20709.286] (-20710.757) (-20709.827) -- 0:31:28
459000 -- (-20712.440) [-20704.141] (-20712.128) (-20712.297) * (-20706.911) (-20704.513) (-20726.125) [-20707.825] -- 0:31:25
460000 -- [-20709.632] (-20711.583) (-20713.487) (-20709.731) * (-20710.130) [-20710.545] (-20712.609) (-20707.690) -- 0:31:21
Average standard deviation of split frequencies: 0.007504
461000 -- (-20714.725) [-20704.431] (-20713.808) (-20704.501) * (-20711.574) [-20705.223] (-20707.030) (-20711.727) -- 0:31:18
462000 -- (-20710.262) (-20702.825) (-20726.866) [-20704.760] * (-20705.993) (-20711.447) [-20709.741] (-20703.551) -- 0:31:16
463000 -- (-20723.823) (-20708.986) (-20706.323) [-20703.317] * (-20713.426) (-20707.627) [-20708.270] (-20704.736) -- 0:31:11
464000 -- [-20704.454] (-20712.813) (-20706.968) (-20710.202) * [-20706.163] (-20705.267) (-20706.578) (-20711.547) -- 0:31:09
465000 -- [-20706.177] (-20710.839) (-20710.721) (-20707.334) * [-20705.604] (-20707.339) (-20698.933) (-20702.642) -- 0:31:05
Average standard deviation of split frequencies: 0.007418
466000 -- [-20709.626] (-20715.692) (-20709.177) (-20716.133) * (-20712.727) (-20708.764) [-20708.316] (-20715.435) -- 0:31:02
467000 -- (-20711.086) (-20724.630) [-20705.280] (-20719.205) * (-20706.375) (-20708.486) (-20705.392) [-20704.921] -- 0:30:58
468000 -- (-20707.308) (-20703.520) [-20707.385] (-20707.644) * (-20707.192) [-20709.680] (-20705.746) (-20709.368) -- 0:30:55
469000 -- (-20722.133) (-20721.776) [-20707.313] (-20706.051) * (-20706.893) [-20701.753] (-20713.857) (-20711.275) -- 0:30:51
470000 -- (-20706.531) (-20712.284) (-20712.814) [-20714.521] * (-20710.051) (-20702.109) (-20715.463) [-20709.397] -- 0:30:48
Average standard deviation of split frequencies: 0.007345
471000 -- (-20707.923) (-20706.160) [-20710.211] (-20710.493) * (-20723.320) (-20710.910) (-20706.122) [-20709.567] -- 0:30:44
472000 -- [-20707.163] (-20707.811) (-20715.461) (-20707.187) * [-20698.949] (-20707.304) (-20711.859) (-20711.180) -- 0:30:41
473000 -- [-20707.620] (-20709.469) (-20711.530) (-20710.909) * (-20706.906) (-20705.136) [-20702.276] (-20708.649) -- 0:30:37
474000 -- [-20706.000] (-20705.509) (-20705.144) (-20710.993) * (-20715.051) (-20712.458) (-20707.577) [-20702.852] -- 0:30:34
475000 -- (-20706.510) (-20710.373) [-20707.293] (-20706.572) * (-20709.453) (-20708.544) (-20715.201) [-20705.424] -- 0:30:30
Average standard deviation of split frequencies: 0.006822
476000 -- [-20707.418] (-20704.672) (-20717.652) (-20705.820) * (-20710.932) [-20701.291] (-20709.543) (-20709.873) -- 0:30:27
477000 -- (-20700.321) (-20705.615) [-20710.793] (-20705.778) * (-20715.289) (-20712.574) (-20719.762) [-20714.666] -- 0:30:23
478000 -- [-20702.400] (-20714.326) (-20707.528) (-20701.627) * (-20704.722) [-20706.056] (-20713.480) (-20714.693) -- 0:30:20
479000 -- (-20706.273) (-20709.360) (-20713.739) [-20699.739] * (-20705.798) (-20708.112) (-20714.426) [-20709.553] -- 0:30:16
480000 -- (-20714.836) (-20702.846) [-20702.582] (-20709.270) * (-20706.445) (-20708.894) (-20708.069) [-20701.520] -- 0:30:12
Average standard deviation of split frequencies: 0.006974
481000 -- [-20714.946] (-20717.161) (-20709.914) (-20710.899) * (-20708.294) [-20710.290] (-20713.365) (-20710.263) -- 0:30:09
482000 -- [-20717.544] (-20713.316) (-20719.044) (-20705.489) * [-20703.827] (-20715.964) (-20711.900) (-20710.714) -- 0:30:05
483000 -- (-20718.300) (-20707.595) [-20714.537] (-20703.909) * (-20706.793) (-20714.187) (-20715.546) [-20701.012] -- 0:30:02
484000 -- (-20710.387) [-20704.038] (-20707.861) (-20712.089) * (-20707.299) (-20718.501) [-20701.186] (-20704.827) -- 0:29:59
485000 -- [-20704.054] (-20700.529) (-20711.599) (-20718.224) * (-20705.524) [-20701.430] (-20704.062) (-20706.930) -- 0:29:55
Average standard deviation of split frequencies: 0.007329
486000 -- (-20716.737) (-20717.180) [-20716.504] (-20711.865) * (-20718.850) (-20710.785) (-20706.430) [-20704.177] -- 0:29:52
487000 -- (-20706.331) (-20712.714) [-20703.831] (-20708.674) * [-20699.343] (-20705.902) (-20703.156) (-20704.226) -- 0:29:48
488000 -- (-20710.044) (-20701.582) [-20708.224] (-20704.216) * (-20714.718) (-20716.439) (-20714.143) [-20705.051] -- 0:29:45
489000 -- [-20702.863] (-20718.343) (-20714.497) (-20711.021) * (-20709.785) (-20707.538) [-20708.618] (-20706.588) -- 0:29:41
490000 -- (-20708.506) [-20706.097] (-20712.052) (-20705.510) * (-20706.810) (-20705.727) [-20707.846] (-20704.505) -- 0:29:38
Average standard deviation of split frequencies: 0.007472
491000 -- [-20708.319] (-20701.089) (-20714.467) (-20710.024) * (-20714.758) (-20711.278) [-20703.598] (-20705.499) -- 0:29:34
492000 -- [-20702.371] (-20711.505) (-20709.907) (-20708.256) * (-20718.378) [-20704.240] (-20713.512) (-20708.241) -- 0:29:31
493000 -- (-20710.056) (-20709.284) (-20712.868) [-20711.238] * (-20708.292) (-20709.346) [-20701.289] (-20708.874) -- 0:29:27
494000 -- (-20703.289) (-20713.696) [-20710.310] (-20708.482) * (-20713.819) (-20705.664) [-20706.416] (-20707.358) -- 0:29:24
495000 -- (-20710.606) (-20708.994) (-20705.104) [-20704.933] * (-20708.767) [-20704.527] (-20713.403) (-20713.781) -- 0:29:20
Average standard deviation of split frequencies: 0.007181
496000 -- (-20710.325) (-20709.443) [-20707.519] (-20707.390) * (-20711.447) [-20703.340] (-20713.954) (-20712.528) -- 0:29:17
497000 -- (-20712.898) (-20704.081) [-20708.525] (-20707.583) * (-20711.118) [-20712.052] (-20712.273) (-20717.861) -- 0:29:13
498000 -- [-20706.037] (-20707.380) (-20712.268) (-20708.360) * [-20713.668] (-20704.659) (-20725.973) (-20711.987) -- 0:29:09
499000 -- (-20705.286) [-20706.852] (-20712.306) (-20704.902) * (-20706.721) [-20707.967] (-20713.977) (-20709.315) -- 0:29:06
500000 -- (-20706.332) [-20704.110] (-20724.409) (-20709.893) * (-20708.149) [-20718.116] (-20713.436) (-20711.519) -- 0:29:03
Average standard deviation of split frequencies: 0.006905
501000 -- (-20701.243) (-20712.707) [-20711.459] (-20705.490) * (-20717.537) [-20711.757] (-20711.119) (-20704.200) -- 0:29:00
502000 -- (-20706.148) [-20713.404] (-20713.600) (-20714.399) * (-20710.472) [-20707.953] (-20710.173) (-20706.695) -- 0:28:56
503000 -- [-20710.323] (-20706.612) (-20710.379) (-20711.060) * [-20699.750] (-20714.149) (-20709.429) (-20707.341) -- 0:28:53
504000 -- (-20719.110) [-20717.904] (-20713.836) (-20705.457) * (-20702.843) (-20701.136) (-20716.515) [-20705.490] -- 0:28:49
505000 -- [-20709.927] (-20706.121) (-20712.912) (-20702.004) * (-20702.379) (-20702.480) [-20705.964] (-20709.122) -- 0:28:46
Average standard deviation of split frequencies: 0.006418
506000 -- [-20705.606] (-20702.050) (-20701.438) (-20706.605) * (-20704.290) [-20708.599] (-20717.013) (-20703.465) -- 0:28:42
507000 -- [-20702.626] (-20722.343) (-20707.358) (-20704.160) * (-20705.376) [-20702.467] (-20706.431) (-20704.026) -- 0:28:39
508000 -- (-20706.532) (-20715.387) (-20705.346) [-20703.593] * (-20704.574) (-20706.197) (-20707.899) [-20703.257] -- 0:28:35
509000 -- (-20710.531) [-20702.605] (-20710.401) (-20702.121) * (-20705.517) [-20710.183] (-20713.992) (-20702.921) -- 0:28:32
510000 -- [-20709.007] (-20719.138) (-20709.470) (-20707.944) * (-20703.684) (-20709.415) [-20709.468] (-20709.575) -- 0:28:28
Average standard deviation of split frequencies: 0.006359
511000 -- (-20707.088) [-20703.932] (-20716.570) (-20704.611) * [-20707.669] (-20711.400) (-20702.895) (-20711.457) -- 0:28:25
512000 -- [-20699.337] (-20711.931) (-20707.211) (-20706.903) * (-20709.704) (-20718.323) [-20707.909] (-20708.606) -- 0:28:21
513000 -- (-20709.821) (-20709.144) (-20707.242) [-20702.576] * (-20712.514) [-20713.983] (-20713.296) (-20709.258) -- 0:28:18
514000 -- (-20712.323) (-20713.830) [-20706.541] (-20707.189) * (-20696.916) (-20715.984) (-20714.068) [-20703.425] -- 0:28:14
515000 -- (-20704.112) [-20709.038] (-20708.332) (-20712.978) * (-20714.035) (-20710.084) [-20713.199] (-20703.069) -- 0:28:11
Average standard deviation of split frequencies: 0.006294
516000 -- (-20715.344) (-20704.405) (-20703.094) [-20703.505] * (-20708.798) (-20712.720) [-20700.635] (-20705.186) -- 0:28:07
517000 -- (-20714.621) [-20706.152] (-20718.193) (-20713.087) * (-20704.548) [-20704.308] (-20700.745) (-20709.412) -- 0:28:04
518000 -- (-20704.552) (-20703.805) (-20711.000) [-20705.564] * (-20711.446) (-20705.980) (-20703.832) [-20708.443] -- 0:28:00
519000 -- (-20709.165) (-20705.311) [-20707.907] (-20702.225) * (-20710.763) (-20711.486) (-20706.135) [-20706.405] -- 0:27:57
520000 -- (-20714.583) (-20709.283) [-20701.191] (-20721.058) * (-20707.338) [-20703.468] (-20710.890) (-20705.337) -- 0:27:53
Average standard deviation of split frequencies: 0.006237
521000 -- (-20705.617) [-20713.842] (-20710.463) (-20701.096) * (-20709.899) (-20704.697) [-20702.490] (-20722.043) -- 0:27:50
522000 -- (-20704.936) (-20707.182) [-20711.231] (-20703.179) * (-20709.981) [-20709.148] (-20712.076) (-20717.341) -- 0:27:46
523000 -- (-20700.536) (-20715.896) (-20704.649) [-20704.502] * (-20716.110) (-20706.044) [-20703.883] (-20709.612) -- 0:27:42
524000 -- (-20702.820) (-20707.571) (-20706.013) [-20702.514] * (-20717.580) (-20719.643) (-20705.448) [-20708.506] -- 0:27:39
525000 -- (-20710.082) [-20705.283] (-20707.214) (-20708.724) * (-20707.134) (-20705.560) [-20710.094] (-20711.554) -- 0:27:36
Average standard deviation of split frequencies: 0.005975
526000 -- (-20705.962) [-20705.455] (-20700.254) (-20709.546) * (-20707.131) [-20706.119] (-20702.204) (-20710.915) -- 0:27:32
527000 -- (-20705.624) (-20699.485) [-20706.549] (-20716.306) * (-20710.764) (-20720.138) (-20701.565) [-20705.519] -- 0:27:29
528000 -- (-20707.535) [-20705.863] (-20713.343) (-20711.209) * (-20712.605) (-20711.258) (-20721.640) [-20701.507] -- 0:27:25
529000 -- (-20709.497) [-20701.941] (-20710.934) (-20707.130) * (-20704.429) [-20705.344] (-20721.398) (-20716.579) -- 0:27:22
530000 -- (-20723.351) (-20717.744) [-20704.732] (-20705.673) * (-20702.243) (-20703.610) [-20706.023] (-20708.352) -- 0:27:18
Average standard deviation of split frequencies: 0.005922
531000 -- [-20715.878] (-20704.247) (-20700.785) (-20709.476) * (-20704.079) (-20720.691) [-20709.926] (-20712.908) -- 0:27:15
532000 -- (-20716.312) (-20708.942) [-20707.716] (-20710.822) * [-20713.512] (-20717.221) (-20709.247) (-20710.832) -- 0:27:11
533000 -- (-20711.220) (-20710.177) (-20706.756) [-20702.059] * [-20705.565] (-20715.233) (-20704.210) (-20713.655) -- 0:27:08
534000 -- (-20717.287) (-20704.164) [-20706.359] (-20706.078) * (-20710.737) [-20701.612] (-20711.085) (-20706.588) -- 0:27:04
535000 -- (-20708.316) (-20707.631) [-20701.888] (-20707.131) * (-20704.102) (-20714.143) (-20705.297) [-20710.805] -- 0:27:01
Average standard deviation of split frequencies: 0.005668
536000 -- (-20707.873) (-20719.899) [-20713.847] (-20706.742) * (-20708.993) (-20709.379) (-20705.922) [-20704.546] -- 0:26:57
537000 -- (-20706.773) [-20704.674] (-20705.295) (-20707.277) * (-20706.551) (-20704.209) [-20709.926] (-20708.747) -- 0:26:54
538000 -- (-20712.319) (-20708.305) [-20711.470] (-20717.315) * [-20704.176] (-20708.992) (-20714.224) (-20722.106) -- 0:26:50
539000 -- [-20711.802] (-20705.973) (-20706.697) (-20706.603) * (-20705.255) (-20711.563) [-20710.392] (-20708.703) -- 0:26:47
540000 -- [-20703.275] (-20711.961) (-20705.309) (-20712.162) * (-20703.660) (-20699.596) (-20715.199) [-20705.625] -- 0:26:44
Average standard deviation of split frequencies: 0.005619
541000 -- [-20708.679] (-20706.955) (-20713.502) (-20720.740) * (-20716.342) (-20715.508) (-20714.718) [-20715.677] -- 0:26:40
542000 -- (-20718.151) (-20705.912) (-20712.198) [-20711.905] * (-20711.739) (-20711.563) [-20712.659] (-20721.229) -- 0:26:37
543000 -- (-20708.922) (-20705.107) [-20705.561] (-20715.928) * (-20701.220) (-20706.581) (-20705.895) [-20712.930] -- 0:26:33
544000 -- (-20722.438) (-20713.627) [-20700.705] (-20715.490) * (-20711.152) (-20712.636) [-20704.459] (-20710.407) -- 0:26:30
545000 -- (-20708.450) [-20703.737] (-20712.648) (-20708.387) * (-20708.451) (-20712.419) (-20704.677) [-20702.426] -- 0:26:26
Average standard deviation of split frequencies: 0.005564
546000 -- [-20703.469] (-20712.768) (-20713.990) (-20711.633) * [-20707.652] (-20713.426) (-20706.168) (-20709.767) -- 0:26:23
547000 -- (-20708.771) (-20710.107) (-20706.328) [-20709.608] * (-20705.421) (-20714.950) (-20714.327) [-20707.702] -- 0:26:19
548000 -- (-20712.497) (-20704.426) [-20701.968] (-20713.249) * [-20705.734] (-20710.340) (-20711.410) (-20713.692) -- 0:26:16
549000 -- (-20718.440) [-20705.197] (-20707.133) (-20706.261) * [-20704.757] (-20706.224) (-20715.363) (-20716.841) -- 0:26:12
550000 -- (-20710.192) (-20711.061) [-20710.516] (-20705.452) * (-20711.878) [-20705.441] (-20714.610) (-20711.087) -- 0:26:09
Average standard deviation of split frequencies: 0.005327
551000 -- (-20715.074) [-20707.071] (-20703.310) (-20710.349) * (-20711.471) [-20701.874] (-20707.995) (-20718.760) -- 0:26:05
552000 -- (-20711.694) (-20706.997) [-20703.854] (-20706.222) * [-20704.269] (-20707.584) (-20704.469) (-20710.094) -- 0:26:02
553000 -- (-20707.384) (-20709.455) (-20708.029) [-20701.546] * (-20705.937) (-20700.419) (-20712.655) [-20703.391] -- 0:25:58
554000 -- (-20702.213) [-20707.409] (-20710.341) (-20711.472) * (-20704.582) [-20709.725] (-20703.839) (-20712.644) -- 0:25:55
555000 -- (-20710.319) [-20702.102] (-20701.250) (-20707.744) * (-20702.144) (-20714.936) [-20703.453] (-20709.549) -- 0:25:51
Average standard deviation of split frequencies: 0.005087
556000 -- (-20718.801) (-20698.440) (-20705.567) [-20702.458] * [-20705.948] (-20710.414) (-20706.279) (-20709.153) -- 0:25:48
557000 -- (-20706.782) (-20699.493) (-20705.405) [-20702.707] * (-20712.492) (-20708.696) (-20707.868) [-20703.097] -- 0:25:44
558000 -- (-20708.990) [-20706.320] (-20708.697) (-20705.747) * (-20713.605) (-20713.430) [-20704.253] (-20710.036) -- 0:25:41
559000 -- (-20709.644) [-20702.613] (-20711.403) (-20709.543) * (-20705.111) (-20713.413) [-20707.073] (-20708.537) -- 0:25:37
560000 -- (-20709.161) (-20705.816) (-20705.907) [-20707.414] * (-20706.594) (-20711.998) [-20708.863] (-20715.199) -- 0:25:34
Average standard deviation of split frequencies: 0.005045
561000 -- (-20704.621) (-20706.287) (-20704.222) [-20697.331] * (-20702.660) [-20701.305] (-20708.526) (-20723.214) -- 0:25:30
562000 -- (-20714.660) (-20702.467) [-20711.586] (-20704.660) * (-20716.718) (-20703.852) [-20705.849] (-20701.968) -- 0:25:27
563000 -- (-20703.365) [-20705.289] (-20722.608) (-20709.758) * (-20715.918) (-20715.996) (-20709.074) [-20707.616] -- 0:25:23
564000 -- [-20704.861] (-20703.567) (-20707.928) (-20717.224) * [-20712.067] (-20723.688) (-20701.747) (-20708.197) -- 0:25:20
565000 -- (-20716.518) (-20711.507) (-20717.482) [-20700.497] * (-20718.194) (-20708.672) (-20705.458) [-20708.132] -- 0:25:16
Average standard deviation of split frequencies: 0.004257
566000 -- [-20712.378] (-20707.471) (-20703.778) (-20705.455) * (-20713.093) [-20713.162] (-20707.118) (-20707.925) -- 0:25:13
567000 -- [-20710.750] (-20709.511) (-20720.987) (-20702.267) * (-20708.233) (-20709.327) [-20705.756] (-20709.974) -- 0:25:09
568000 -- (-20706.888) (-20699.184) (-20712.068) [-20702.785] * (-20705.004) (-20706.081) (-20712.446) [-20705.296] -- 0:25:06
569000 -- (-20707.796) (-20705.622) [-20706.523] (-20711.075) * [-20710.854] (-20710.631) (-20714.674) (-20712.714) -- 0:25:02
570000 -- (-20707.606) (-20713.668) (-20708.633) [-20707.723] * [-20712.538] (-20702.275) (-20705.581) (-20714.633) -- 0:24:59
Average standard deviation of split frequencies: 0.003304
571000 -- (-20709.499) [-20707.784] (-20708.332) (-20705.680) * [-20705.026] (-20715.094) (-20719.862) (-20717.772) -- 0:24:55
572000 -- (-20704.127) [-20704.594] (-20709.647) (-20720.834) * (-20700.205) (-20701.155) (-20711.930) [-20713.485] -- 0:24:52
573000 -- [-20708.101] (-20704.897) (-20710.426) (-20707.121) * (-20703.941) [-20708.098] (-20711.711) (-20708.681) -- 0:24:48
574000 -- (-20708.587) (-20723.876) (-20716.391) [-20703.363] * (-20701.104) [-20703.296] (-20706.859) (-20717.613) -- 0:24:45
575000 -- [-20706.105] (-20706.613) (-20705.303) (-20714.850) * (-20709.767) (-20705.181) [-20704.905] (-20703.004) -- 0:24:41
Average standard deviation of split frequencies: 0.003274
576000 -- (-20707.278) (-20714.703) (-20705.057) [-20703.940] * (-20704.974) (-20701.642) [-20707.827] (-20710.246) -- 0:24:38
577000 -- [-20702.993] (-20713.925) (-20712.055) (-20712.045) * (-20721.607) (-20714.391) (-20707.349) [-20706.780] -- 0:24:35
578000 -- (-20720.378) [-20706.108] (-20714.616) (-20709.941) * [-20702.971] (-20705.710) (-20708.228) (-20710.448) -- 0:24:31
579000 -- (-20704.300) (-20715.322) [-20710.800] (-20721.403) * (-20707.236) [-20702.539] (-20706.151) (-20713.561) -- 0:24:28
580000 -- [-20703.382] (-20700.674) (-20712.686) (-20715.383) * (-20713.851) (-20709.704) (-20713.954) [-20704.281] -- 0:24:24
Average standard deviation of split frequencies: 0.002526
581000 -- (-20707.246) [-20706.205] (-20714.963) (-20720.228) * (-20715.978) (-20709.562) (-20703.258) [-20706.735] -- 0:24:21
582000 -- [-20702.496] (-20706.540) (-20700.230) (-20726.443) * (-20711.370) (-20713.900) (-20704.612) [-20711.049] -- 0:24:17
583000 -- [-20709.662] (-20706.178) (-20709.575) (-20709.487) * (-20713.577) [-20709.487] (-20700.172) (-20710.293) -- 0:24:14
584000 -- [-20712.607] (-20710.414) (-20701.969) (-20707.309) * (-20704.219) (-20708.022) [-20706.107] (-20705.094) -- 0:24:11
585000 -- (-20713.717) (-20717.628) (-20703.086) [-20704.594] * [-20701.806] (-20709.893) (-20707.151) (-20706.004) -- 0:24:07
Average standard deviation of split frequencies: 0.003397
586000 -- (-20721.089) (-20709.905) (-20712.531) [-20704.300] * [-20710.644] (-20711.722) (-20712.830) (-20700.230) -- 0:24:04
587000 -- (-20718.156) (-20707.535) (-20710.849) [-20705.178] * (-20708.287) (-20703.560) (-20703.796) [-20704.252] -- 0:24:00
588000 -- (-20715.993) [-20700.926] (-20711.972) (-20698.832) * (-20706.185) [-20705.562] (-20717.594) (-20703.374) -- 0:23:56
589000 -- (-20711.423) (-20721.529) (-20706.323) [-20699.791] * (-20711.222) [-20705.498] (-20710.985) (-20714.099) -- 0:23:53
590000 -- (-20708.769) (-20713.065) (-20704.116) [-20704.512] * (-20707.286) (-20707.524) (-20706.384) [-20708.821] -- 0:23:49
Average standard deviation of split frequencies: 0.003547
591000 -- (-20712.670) (-20706.638) (-20713.245) [-20710.969] * (-20708.234) [-20711.607] (-20702.303) (-20706.353) -- 0:23:46
592000 -- (-20704.654) (-20704.890) [-20702.432] (-20717.676) * (-20718.385) [-20704.001] (-20708.206) (-20712.671) -- 0:23:43
593000 -- (-20703.498) (-20708.882) [-20701.204] (-20710.254) * [-20710.886] (-20703.141) (-20709.726) (-20706.956) -- 0:23:39
594000 -- (-20711.428) (-20703.620) (-20707.044) [-20710.633] * (-20709.744) [-20703.471] (-20715.764) (-20708.294) -- 0:23:36
595000 -- [-20705.911] (-20706.111) (-20710.673) (-20710.652) * (-20706.560) [-20708.032] (-20711.107) (-20707.312) -- 0:23:32
Average standard deviation of split frequencies: 0.004394
596000 -- [-20708.969] (-20706.484) (-20714.670) (-20700.595) * (-20714.874) (-20703.064) (-20706.224) [-20704.086] -- 0:23:28
597000 -- (-20709.488) [-20698.005] (-20711.962) (-20710.706) * (-20707.866) (-20714.569) (-20712.143) [-20714.160] -- 0:23:25
598000 -- (-20705.651) (-20701.867) [-20712.799] (-20718.464) * (-20704.385) (-20712.607) [-20711.271] (-20713.645) -- 0:23:22
599000 -- (-20710.262) [-20712.344] (-20717.569) (-20709.666) * (-20712.286) [-20707.056] (-20719.809) (-20705.989) -- 0:23:18
600000 -- (-20710.719) (-20705.495) (-20705.255) [-20706.990] * (-20708.522) [-20704.481] (-20712.659) (-20716.965) -- 0:23:15
Average standard deviation of split frequencies: 0.004360
601000 -- (-20702.821) (-20709.567) [-20700.506] (-20711.502) * (-20705.666) (-20713.429) [-20711.120] (-20705.762) -- 0:23:11
602000 -- (-20705.949) (-20702.496) (-20714.245) [-20705.322] * (-20708.215) (-20706.439) (-20704.900) [-20702.880] -- 0:23:07
603000 -- (-20713.689) [-20703.169] (-20713.488) (-20706.862) * (-20717.881) [-20702.291] (-20715.661) (-20705.668) -- 0:23:04
604000 -- (-20720.355) (-20709.801) (-20720.555) [-20711.815] * (-20710.577) [-20705.743] (-20706.233) (-20705.498) -- 0:23:00
605000 -- (-20706.799) [-20700.362] (-20720.449) (-20703.698) * [-20711.565] (-20709.452) (-20714.416) (-20702.310) -- 0:22:57
Average standard deviation of split frequencies: 0.004149
606000 -- (-20703.530) (-20704.076) (-20710.315) [-20700.517] * (-20712.919) (-20712.077) (-20704.349) [-20704.793] -- 0:22:53
607000 -- (-20704.840) (-20703.172) (-20707.469) [-20706.642] * [-20711.048] (-20714.031) (-20703.724) (-20703.163) -- 0:22:50
608000 -- (-20703.056) (-20708.606) (-20712.606) [-20706.736] * (-20707.753) [-20706.326] (-20703.295) (-20708.246) -- 0:22:46
609000 -- (-20710.516) [-20706.691] (-20706.857) (-20700.733) * (-20703.786) (-20709.279) [-20705.518] (-20707.097) -- 0:22:43
610000 -- (-20712.230) [-20707.054] (-20704.396) (-20713.105) * [-20704.795] (-20704.725) (-20714.568) (-20710.254) -- 0:22:39
Average standard deviation of split frequencies: 0.004289
611000 -- (-20710.238) [-20704.051] (-20709.388) (-20715.825) * (-20715.988) (-20708.853) [-20706.754] (-20716.546) -- 0:22:36
612000 -- (-20707.918) (-20710.903) [-20709.067] (-20710.025) * (-20715.755) (-20708.481) (-20708.276) [-20709.551] -- 0:22:32
613000 -- (-20703.824) [-20706.684] (-20704.760) (-20714.008) * (-20706.033) (-20720.791) (-20715.138) [-20706.187] -- 0:22:29
614000 -- (-20707.987) [-20701.653] (-20708.229) (-20711.142) * [-20703.983] (-20718.479) (-20704.739) (-20706.506) -- 0:22:25
615000 -- (-20713.553) (-20710.988) (-20711.226) [-20713.495] * (-20701.610) (-20710.639) (-20711.104) [-20704.053] -- 0:22:22
Average standard deviation of split frequencies: 0.004762
616000 -- (-20716.079) (-20707.664) (-20716.324) [-20704.887] * (-20708.509) [-20706.080] (-20715.035) (-20712.361) -- 0:22:19
617000 -- [-20702.397] (-20707.102) (-20710.066) (-20708.716) * (-20702.708) (-20706.334) (-20713.822) [-20700.100] -- 0:22:15
618000 -- [-20703.050] (-20708.406) (-20709.105) (-20706.849) * (-20706.778) (-20716.673) (-20712.029) [-20706.960] -- 0:22:12
619000 -- (-20712.704) [-20699.641] (-20701.007) (-20709.077) * (-20706.379) (-20706.542) [-20699.260] (-20710.292) -- 0:22:08
620000 -- [-20701.083] (-20707.552) (-20723.633) (-20707.255) * (-20708.742) [-20715.712] (-20702.395) (-20703.551) -- 0:22:05
Average standard deviation of split frequencies: 0.004220
621000 -- (-20713.094) [-20716.488] (-20705.451) (-20705.091) * (-20702.945) [-20703.192] (-20708.564) (-20709.031) -- 0:22:01
622000 -- (-20708.752) (-20709.595) [-20703.393] (-20708.922) * (-20706.968) [-20703.145] (-20708.734) (-20709.070) -- 0:21:58
623000 -- (-20706.112) [-20709.113] (-20710.579) (-20710.110) * (-20710.173) [-20699.745] (-20710.059) (-20699.971) -- 0:21:54
624000 -- [-20700.273] (-20709.252) (-20705.974) (-20714.288) * (-20709.572) (-20702.559) [-20704.114] (-20705.371) -- 0:21:51
625000 -- (-20708.991) (-20716.299) (-20708.818) [-20708.631] * (-20713.597) [-20705.524] (-20706.270) (-20701.308) -- 0:21:47
Average standard deviation of split frequencies: 0.004016
626000 -- (-20713.784) (-20705.342) [-20700.618] (-20705.841) * (-20718.830) (-20710.941) [-20703.329] (-20702.610) -- 0:21:44
627000 -- (-20709.513) (-20708.936) (-20702.346) [-20700.352] * (-20711.252) (-20713.093) [-20715.617] (-20720.937) -- 0:21:40
628000 -- (-20710.418) (-20709.593) (-20701.317) [-20708.997] * [-20705.757] (-20704.249) (-20708.214) (-20718.914) -- 0:21:37
629000 -- (-20709.589) (-20714.360) (-20706.579) [-20711.423] * (-20704.469) (-20712.845) [-20702.436] (-20717.714) -- 0:21:33
630000 -- (-20717.275) (-20703.110) (-20702.357) [-20707.052] * (-20701.282) (-20711.795) [-20709.898] (-20706.000) -- 0:21:30
Average standard deviation of split frequencies: 0.003654
631000 -- [-20709.384] (-20723.466) (-20706.578) (-20708.781) * (-20701.515) (-20703.014) [-20713.145] (-20699.840) -- 0:21:26
632000 -- [-20708.582] (-20711.887) (-20706.311) (-20705.320) * (-20709.872) [-20709.775] (-20709.677) (-20708.592) -- 0:21:23
633000 -- [-20704.922] (-20704.949) (-20704.278) (-20710.802) * (-20702.629) (-20708.845) (-20706.112) [-20701.667] -- 0:21:19
634000 -- (-20706.222) (-20707.331) [-20709.050] (-20713.165) * (-20721.291) (-20708.054) (-20702.663) [-20708.477] -- 0:21:16
635000 -- (-20716.031) (-20709.411) (-20710.324) [-20707.392] * [-20709.229] (-20709.567) (-20716.565) (-20702.006) -- 0:21:12
Average standard deviation of split frequencies: 0.003459
636000 -- (-20712.033) (-20702.553) (-20707.256) [-20706.277] * (-20707.915) [-20706.411] (-20710.160) (-20709.855) -- 0:21:09
637000 -- (-20711.093) (-20713.574) [-20706.337] (-20707.410) * (-20712.303) [-20708.616] (-20702.086) (-20712.014) -- 0:21:05
638000 -- (-20712.740) [-20706.161] (-20708.467) (-20711.909) * [-20710.399] (-20713.349) (-20709.532) (-20707.672) -- 0:21:01
639000 -- (-20701.233) (-20713.043) [-20705.272] (-20706.504) * (-20711.833) (-20709.863) [-20706.283] (-20719.810) -- 0:20:58
640000 -- (-20715.227) (-20706.953) [-20711.485] (-20700.063) * [-20701.268] (-20712.284) (-20711.117) (-20708.262) -- 0:20:54
Average standard deviation of split frequencies: 0.003434
641000 -- (-20709.668) (-20706.524) (-20703.550) [-20702.895] * [-20704.475] (-20707.309) (-20706.565) (-20715.923) -- 0:20:51
642000 -- (-20704.737) [-20705.123] (-20705.619) (-20715.660) * (-20704.958) (-20706.302) (-20707.065) [-20705.999] -- 0:20:47
643000 -- (-20706.906) [-20706.563] (-20707.765) (-20710.410) * [-20702.023] (-20712.362) (-20707.522) (-20703.384) -- 0:20:44
644000 -- (-20714.870) (-20705.301) [-20702.945] (-20711.403) * (-20704.099) [-20702.840] (-20707.150) (-20708.369) -- 0:20:41
645000 -- (-20701.863) (-20720.512) (-20722.034) [-20705.158] * (-20705.510) [-20707.706] (-20715.902) (-20716.520) -- 0:20:37
Average standard deviation of split frequencies: 0.003081
646000 -- (-20710.005) [-20708.098] (-20718.140) (-20714.240) * (-20704.156) [-20708.846] (-20724.252) (-20709.463) -- 0:20:34
647000 -- (-20708.092) [-20706.887] (-20708.131) (-20704.684) * (-20708.754) [-20708.397] (-20716.493) (-20713.715) -- 0:20:30
648000 -- (-20707.274) (-20709.654) (-20704.519) [-20701.495] * (-20712.096) [-20709.660] (-20720.363) (-20721.508) -- 0:20:27
649000 -- (-20713.243) (-20705.108) (-20709.423) [-20707.861] * [-20713.796] (-20708.723) (-20706.100) (-20707.271) -- 0:20:23
650000 -- (-20705.371) (-20718.765) [-20706.519] (-20704.790) * (-20708.985) (-20711.577) [-20704.312] (-20703.365) -- 0:20:20
Average standard deviation of split frequencies: 0.003220
651000 -- (-20711.648) (-20705.106) (-20701.564) [-20707.957] * (-20702.536) [-20703.917] (-20717.899) (-20703.668) -- 0:20:16
652000 -- (-20711.265) [-20698.972] (-20707.802) (-20710.274) * (-20710.711) [-20701.174] (-20713.619) (-20710.859) -- 0:20:12
653000 -- (-20707.172) [-20713.306] (-20706.807) (-20711.377) * (-20703.178) (-20710.519) [-20714.521] (-20704.651) -- 0:20:09
654000 -- (-20709.982) [-20703.792] (-20709.748) (-20707.949) * (-20703.967) (-20709.621) [-20708.956] (-20703.617) -- 0:20:05
655000 -- (-20704.604) (-20706.258) [-20707.226] (-20713.533) * (-20708.366) [-20708.298] (-20707.153) (-20711.106) -- 0:20:02
Average standard deviation of split frequencies: 0.003353
656000 -- (-20705.554) (-20702.461) [-20704.115] (-20713.884) * (-20708.658) (-20706.270) (-20709.123) [-20702.606] -- 0:19:58
657000 -- (-20710.942) (-20712.609) (-20707.308) [-20709.927] * [-20719.517] (-20703.167) (-20705.425) (-20710.147) -- 0:19:55
658000 -- (-20701.376) [-20711.334] (-20707.397) (-20711.591) * (-20701.068) [-20703.439] (-20708.154) (-20708.956) -- 0:19:51
659000 -- (-20723.171) [-20703.782] (-20710.921) (-20713.747) * [-20702.761] (-20713.208) (-20711.965) (-20709.682) -- 0:19:48
660000 -- (-20705.415) [-20709.572] (-20710.893) (-20713.936) * (-20709.399) (-20709.015) [-20706.197] (-20711.564) -- 0:19:44
Average standard deviation of split frequencies: 0.002854
661000 -- (-20717.578) (-20705.373) [-20708.020] (-20707.417) * (-20706.345) (-20720.364) [-20712.833] (-20707.240) -- 0:19:41
662000 -- (-20706.828) [-20700.902] (-20710.531) (-20711.172) * (-20718.674) [-20702.782] (-20712.794) (-20705.088) -- 0:19:37
663000 -- (-20716.195) (-20710.554) (-20712.270) [-20702.458] * (-20704.556) [-20712.069] (-20708.650) (-20707.841) -- 0:19:34
664000 -- [-20708.692] (-20716.415) (-20711.391) (-20708.913) * (-20719.626) [-20703.609] (-20708.854) (-20710.000) -- 0:19:30
665000 -- (-20709.487) (-20710.593) (-20703.951) [-20711.996] * (-20712.595) [-20706.628] (-20704.997) (-20710.415) -- 0:19:27
Average standard deviation of split frequencies: 0.002831
666000 -- (-20703.588) (-20713.015) (-20701.777) [-20701.267] * (-20707.265) (-20716.908) [-20701.812] (-20715.570) -- 0:19:23
667000 -- (-20705.766) (-20705.704) (-20709.621) [-20701.208] * [-20708.699] (-20713.732) (-20706.564) (-20700.848) -- 0:19:20
668000 -- [-20708.501] (-20705.260) (-20711.023) (-20711.777) * (-20708.910) (-20712.641) (-20704.037) [-20710.804] -- 0:19:16
669000 -- (-20700.145) [-20708.451] (-20720.196) (-20706.422) * (-20709.941) [-20704.495] (-20710.603) (-20712.554) -- 0:19:12
670000 -- (-20702.518) (-20717.272) (-20704.864) [-20710.449] * (-20705.222) (-20711.483) [-20703.069] (-20722.418) -- 0:19:09
Average standard deviation of split frequencies: 0.002655
671000 -- (-20705.065) (-20703.010) (-20724.378) [-20702.077] * [-20710.156] (-20698.523) (-20705.682) (-20708.679) -- 0:19:05
672000 -- (-20710.801) [-20707.375] (-20716.075) (-20711.328) * (-20708.796) (-20702.525) [-20705.223] (-20708.576) -- 0:19:02
673000 -- [-20704.158] (-20708.448) (-20709.080) (-20710.993) * (-20707.783) (-20700.013) [-20704.667] (-20701.756) -- 0:18:58
674000 -- [-20705.285] (-20705.609) (-20711.627) (-20710.234) * (-20705.675) (-20700.910) (-20701.099) [-20703.956] -- 0:18:55
675000 -- (-20715.645) (-20713.468) [-20707.045] (-20711.601) * [-20710.595] (-20714.799) (-20707.515) (-20708.309) -- 0:18:51
Average standard deviation of split frequencies: 0.002789
676000 -- (-20706.273) (-20712.608) (-20711.803) [-20707.003] * (-20704.265) [-20705.697] (-20715.389) (-20706.375) -- 0:18:48
677000 -- (-20718.330) (-20705.110) (-20710.447) [-20706.913] * [-20703.874] (-20712.053) (-20717.926) (-20710.389) -- 0:18:45
678000 -- (-20706.255) [-20707.129] (-20703.615) (-20709.141) * [-20705.632] (-20714.802) (-20719.662) (-20704.044) -- 0:18:41
679000 -- (-20703.618) [-20705.687] (-20706.986) (-20711.771) * (-20717.923) (-20710.282) [-20706.525] (-20705.267) -- 0:18:38
680000 -- (-20718.347) (-20713.050) [-20702.306] (-20700.487) * (-20705.922) [-20710.620] (-20702.114) (-20706.439) -- 0:18:34
Average standard deviation of split frequencies: 0.002616
681000 -- (-20717.519) [-20708.816] (-20703.832) (-20705.498) * [-20703.427] (-20710.122) (-20718.476) (-20707.975) -- 0:18:31
682000 -- (-20715.026) (-20707.430) (-20711.605) [-20697.257] * [-20705.877] (-20705.860) (-20706.112) (-20709.674) -- 0:18:27
683000 -- (-20705.388) [-20707.944] (-20708.813) (-20709.276) * (-20701.247) (-20711.830) (-20701.731) [-20709.425] -- 0:18:23
684000 -- [-20705.584] (-20709.421) (-20712.266) (-20718.217) * [-20711.300] (-20718.481) (-20703.439) (-20714.604) -- 0:18:20
685000 -- (-20719.430) (-20701.909) (-20712.686) [-20709.631] * (-20700.591) (-20704.631) (-20707.744) [-20709.801] -- 0:18:16
Average standard deviation of split frequencies: 0.002443
686000 -- (-20710.645) (-20707.680) (-20711.073) [-20713.623] * (-20711.177) [-20708.282] (-20705.764) (-20711.972) -- 0:18:13
687000 -- (-20714.456) [-20712.070] (-20714.474) (-20707.176) * (-20707.163) (-20717.324) [-20706.392] (-20702.192) -- 0:18:09
688000 -- (-20707.645) (-20707.936) [-20709.979] (-20710.026) * (-20704.424) (-20714.204) (-20703.982) [-20703.113] -- 0:18:06
689000 -- (-20711.463) (-20706.970) (-20705.681) [-20702.273] * (-20705.413) (-20714.520) (-20707.825) [-20714.690] -- 0:18:02
690000 -- (-20704.655) (-20718.749) (-20709.181) [-20704.592] * (-20705.619) (-20706.762) (-20712.561) [-20705.246] -- 0:17:59
Average standard deviation of split frequencies: 0.002123
691000 -- (-20723.780) (-20708.685) [-20701.110] (-20707.362) * (-20706.973) [-20713.664] (-20716.288) (-20705.145) -- 0:17:55
692000 -- [-20715.262] (-20718.813) (-20708.537) (-20708.208) * [-20707.225] (-20715.153) (-20704.450) (-20707.066) -- 0:17:52
693000 -- (-20703.637) [-20707.435] (-20717.214) (-20708.185) * [-20702.552] (-20706.371) (-20712.693) (-20708.314) -- 0:17:48
694000 -- [-20698.842] (-20712.334) (-20709.777) (-20704.494) * [-20702.801] (-20714.208) (-20711.555) (-20708.644) -- 0:17:45
695000 -- [-20701.343] (-20712.170) (-20725.219) (-20706.799) * [-20705.194] (-20708.190) (-20704.766) (-20707.298) -- 0:17:41
Average standard deviation of split frequencies: 0.002258
696000 -- (-20713.853) [-20705.477] (-20719.322) (-20708.405) * (-20714.834) (-20709.206) [-20700.819] (-20713.664) -- 0:17:38
697000 -- (-20708.453) (-20709.796) (-20704.361) [-20706.747] * (-20704.883) (-20705.678) [-20702.476] (-20706.266) -- 0:17:34
698000 -- (-20706.589) (-20705.626) (-20707.796) [-20708.508] * (-20701.740) (-20705.786) (-20707.036) [-20702.506] -- 0:17:31
699000 -- (-20710.874) [-20707.087] (-20703.432) (-20717.111) * (-20707.362) [-20703.874] (-20708.883) (-20717.548) -- 0:17:27
700000 -- (-20714.246) [-20704.521] (-20712.506) (-20707.954) * (-20704.491) (-20716.281) [-20702.339] (-20708.314) -- 0:17:24
Average standard deviation of split frequencies: 0.002093
701000 -- [-20714.403] (-20702.436) (-20708.334) (-20710.728) * (-20702.635) (-20712.564) [-20710.623] (-20704.440) -- 0:17:20
702000 -- (-20716.429) [-20704.934] (-20719.129) (-20702.589) * (-20708.603) (-20716.966) (-20706.302) [-20705.521] -- 0:17:17
703000 -- (-20715.390) (-20703.598) [-20704.418] (-20710.059) * [-20707.623] (-20706.849) (-20714.944) (-20706.785) -- 0:17:13
704000 -- [-20708.910] (-20702.546) (-20714.013) (-20711.294) * (-20702.535) [-20710.510] (-20708.050) (-20710.704) -- 0:17:10
705000 -- [-20704.029] (-20705.838) (-20714.355) (-20712.331) * (-20727.002) (-20713.936) [-20704.746] (-20713.529) -- 0:17:06
Average standard deviation of split frequencies: 0.001632
706000 -- [-20708.279] (-20708.771) (-20701.419) (-20712.739) * (-20706.793) (-20704.814) (-20706.784) [-20710.614] -- 0:17:03
707000 -- (-20711.113) [-20708.593] (-20711.311) (-20711.485) * (-20703.312) (-20707.071) [-20705.370] (-20708.688) -- 0:16:59
708000 -- (-20713.465) (-20706.994) [-20701.156] (-20704.303) * (-20706.446) (-20713.520) [-20704.605] (-20700.617) -- 0:16:55
709000 -- (-20709.995) [-20708.457] (-20702.582) (-20705.327) * (-20716.283) (-20706.571) [-20705.749] (-20705.788) -- 0:16:52
710000 -- (-20708.102) (-20714.822) (-20707.626) [-20708.018] * [-20709.707] (-20709.054) (-20705.626) (-20706.520) -- 0:16:48
Average standard deviation of split frequencies: 0.001179
711000 -- (-20708.915) (-20705.081) [-20703.727] (-20702.781) * (-20707.090) [-20704.583] (-20704.907) (-20710.148) -- 0:16:45
712000 -- (-20708.874) [-20708.724] (-20704.171) (-20718.113) * (-20710.559) (-20697.574) (-20707.590) [-20705.368] -- 0:16:41
713000 -- [-20699.316] (-20705.523) (-20708.237) (-20701.458) * (-20702.960) (-20705.304) [-20711.372] (-20704.608) -- 0:16:38
714000 -- (-20706.711) (-20709.503) [-20716.482] (-20712.746) * [-20705.250] (-20701.769) (-20712.139) (-20708.009) -- 0:16:34
715000 -- (-20703.178) [-20703.492] (-20711.251) (-20716.366) * (-20704.960) [-20706.044] (-20703.239) (-20717.018) -- 0:16:31
Average standard deviation of split frequencies: 0.000878
716000 -- (-20708.051) [-20707.162] (-20707.893) (-20709.529) * (-20704.973) [-20712.816] (-20710.631) (-20713.393) -- 0:16:27
717000 -- (-20707.376) (-20707.610) (-20716.440) [-20700.878] * (-20708.191) (-20711.384) (-20716.886) [-20702.411] -- 0:16:24
718000 -- [-20710.520] (-20719.207) (-20710.996) (-20708.476) * (-20708.955) (-20720.425) (-20713.367) [-20703.917] -- 0:16:20
719000 -- (-20714.974) (-20712.128) [-20705.012] (-20708.558) * (-20706.565) (-20720.194) (-20708.768) [-20704.116] -- 0:16:17
720000 -- (-20713.760) [-20713.133] (-20711.657) (-20713.280) * (-20711.756) [-20709.584] (-20705.331) (-20700.420) -- 0:16:13
Average standard deviation of split frequencies: 0.000727
721000 -- (-20717.577) (-20702.017) (-20703.361) [-20706.288] * (-20717.914) (-20710.352) [-20702.143] (-20709.077) -- 0:16:10
722000 -- (-20721.937) (-20705.663) [-20702.509] (-20710.362) * [-20708.896] (-20708.247) (-20705.014) (-20705.187) -- 0:16:06
723000 -- (-20707.610) (-20701.020) [-20706.006] (-20712.802) * (-20709.728) (-20709.708) [-20708.712] (-20702.417) -- 0:16:03
724000 -- [-20704.658] (-20710.426) (-20707.183) (-20708.759) * (-20708.490) (-20716.780) [-20703.985] (-20716.471) -- 0:15:59
725000 -- (-20706.111) [-20711.681] (-20708.150) (-20708.002) * [-20710.198] (-20710.037) (-20708.101) (-20707.285) -- 0:15:56
Average standard deviation of split frequencies: 0.000577
726000 -- (-20723.514) (-20706.040) [-20704.847] (-20712.263) * (-20710.095) (-20709.769) (-20708.500) [-20709.237] -- 0:15:52
727000 -- [-20707.373] (-20707.275) (-20709.933) (-20707.709) * (-20706.969) [-20706.526] (-20710.119) (-20707.729) -- 0:15:49
728000 -- (-20707.609) [-20710.828] (-20709.821) (-20704.398) * [-20708.736] (-20716.826) (-20719.770) (-20705.415) -- 0:15:45
729000 -- [-20701.148] (-20716.699) (-20704.584) (-20702.416) * [-20718.056] (-20706.230) (-20717.022) (-20703.763) -- 0:15:41
730000 -- [-20703.451] (-20709.363) (-20707.441) (-20710.422) * [-20706.210] (-20704.235) (-20711.795) (-20704.290) -- 0:15:38
Average standard deviation of split frequencies: 0.000287
731000 -- [-20708.332] (-20716.548) (-20708.820) (-20709.863) * [-20703.689] (-20702.882) (-20713.011) (-20718.674) -- 0:15:35
732000 -- (-20705.496) (-20715.911) (-20703.843) [-20706.548] * [-20706.132] (-20707.290) (-20704.936) (-20709.829) -- 0:15:31
733000 -- (-20708.106) (-20711.273) [-20700.872] (-20712.253) * (-20711.501) (-20706.631) (-20706.201) [-20706.709] -- 0:15:28
734000 -- (-20706.263) (-20705.287) [-20704.775] (-20704.567) * (-20705.781) (-20701.623) [-20707.271] (-20705.505) -- 0:15:24
735000 -- (-20708.420) [-20708.161] (-20706.293) (-20716.032) * (-20710.613) (-20707.652) (-20707.372) [-20703.045] -- 0:15:21
Average standard deviation of split frequencies: 0.000712
736000 -- (-20705.547) [-20708.572] (-20703.173) (-20718.187) * [-20708.482] (-20708.379) (-20708.904) (-20706.870) -- 0:15:17
737000 -- [-20699.663] (-20711.397) (-20715.060) (-20706.326) * (-20712.343) (-20719.163) [-20713.088] (-20705.144) -- 0:15:13
738000 -- (-20709.507) (-20710.883) [-20700.411] (-20704.011) * [-20703.410] (-20716.765) (-20712.426) (-20704.772) -- 0:15:10
739000 -- (-20707.371) (-20702.002) [-20708.938] (-20704.408) * [-20704.424] (-20704.547) (-20717.993) (-20704.131) -- 0:15:06
740000 -- (-20706.139) (-20713.656) (-20709.055) [-20706.383] * (-20703.544) [-20703.914] (-20706.295) (-20717.495) -- 0:15:03
Average standard deviation of split frequencies: 0.000566
741000 -- (-20704.177) (-20717.226) (-20711.541) [-20702.911] * [-20702.619] (-20711.214) (-20711.014) (-20710.851) -- 0:15:00
742000 -- [-20712.309] (-20711.578) (-20710.072) (-20710.329) * (-20703.498) [-20702.278] (-20709.810) (-20708.767) -- 0:14:56
743000 -- (-20708.258) (-20706.098) (-20707.274) [-20717.063] * (-20705.131) (-20702.768) (-20712.943) [-20709.275] -- 0:14:53
744000 -- (-20708.313) (-20703.076) [-20706.966] (-20708.404) * (-20707.100) (-20715.381) (-20709.041) [-20699.008] -- 0:14:49
745000 -- (-20707.749) [-20702.474] (-20707.671) (-20703.334) * (-20704.031) [-20704.419] (-20715.527) (-20707.239) -- 0:14:46
Average standard deviation of split frequencies: 0.000702
746000 -- (-20705.636) [-20705.813] (-20703.161) (-20709.431) * [-20708.368] (-20718.764) (-20709.912) (-20711.964) -- 0:14:42
747000 -- (-20713.439) (-20709.736) (-20712.091) [-20707.740] * (-20709.801) (-20707.300) [-20702.737] (-20704.300) -- 0:14:38
748000 -- [-20706.476] (-20712.466) (-20703.503) (-20711.413) * (-20714.081) [-20703.745] (-20712.344) (-20711.797) -- 0:14:35
749000 -- (-20712.276) [-20701.735] (-20710.022) (-20707.454) * (-20715.843) (-20707.741) [-20705.574] (-20708.761) -- 0:14:31
750000 -- [-20699.539] (-20710.317) (-20705.838) (-20706.125) * (-20710.976) [-20714.223] (-20718.761) (-20715.109) -- 0:14:28
Average standard deviation of split frequencies: 0.000140
751000 -- (-20710.418) [-20705.120] (-20713.583) (-20715.904) * [-20707.424] (-20714.873) (-20706.731) (-20705.430) -- 0:14:25
752000 -- [-20708.588] (-20704.302) (-20704.069) (-20710.080) * [-20701.782] (-20711.738) (-20709.564) (-20705.562) -- 0:14:21
753000 -- (-20710.751) [-20701.665] (-20710.319) (-20706.102) * (-20711.018) (-20701.940) [-20711.385] (-20711.299) -- 0:14:18
754000 -- (-20706.457) (-20706.924) (-20718.084) [-20701.763] * (-20709.462) (-20703.167) (-20713.335) [-20715.261] -- 0:14:14
755000 -- (-20711.967) (-20710.872) (-20705.843) [-20706.435] * [-20708.979] (-20710.008) (-20710.950) (-20711.974) -- 0:14:10
Average standard deviation of split frequencies: 0.000000
756000 -- [-20698.758] (-20718.361) (-20704.798) (-20711.157) * (-20716.479) [-20700.095] (-20707.493) (-20722.445) -- 0:14:07
757000 -- (-20704.975) [-20703.973] (-20709.954) (-20708.408) * (-20711.303) (-20704.022) [-20708.079] (-20703.407) -- 0:14:03
758000 -- (-20703.852) (-20708.068) (-20722.580) [-20708.059] * (-20712.622) [-20709.744] (-20707.251) (-20699.839) -- 0:14:00
759000 -- (-20708.217) [-20704.803] (-20707.915) (-20711.726) * [-20701.967] (-20711.962) (-20710.494) (-20702.241) -- 0:13:56
760000 -- (-20711.049) (-20706.822) [-20702.319] (-20708.682) * (-20708.510) (-20701.303) (-20711.861) [-20701.270] -- 0:13:53
Average standard deviation of split frequencies: 0.000138
761000 -- (-20715.057) [-20700.835] (-20703.979) (-20706.753) * (-20713.816) [-20705.928] (-20714.698) (-20707.924) -- 0:13:50
762000 -- (-20717.286) (-20703.806) (-20724.107) [-20703.597] * (-20713.421) (-20718.757) [-20707.578] (-20712.623) -- 0:13:46
763000 -- [-20700.510] (-20715.720) (-20712.977) (-20713.462) * (-20706.186) (-20711.383) [-20705.929] (-20706.185) -- 0:13:42
764000 -- [-20707.495] (-20705.126) (-20701.090) (-20713.923) * [-20701.852] (-20709.962) (-20708.238) (-20699.261) -- 0:13:39
765000 -- (-20707.476) [-20706.412] (-20706.979) (-20711.084) * (-20714.327) (-20704.676) (-20705.885) [-20698.420] -- 0:13:35
Average standard deviation of split frequencies: 0.000274
766000 -- (-20706.474) [-20706.039] (-20713.963) (-20706.783) * [-20703.798] (-20714.526) (-20710.797) (-20701.361) -- 0:13:32
767000 -- (-20704.798) [-20708.050] (-20704.668) (-20710.253) * (-20703.201) (-20711.168) [-20705.514] (-20715.438) -- 0:13:28
768000 -- (-20711.704) (-20705.938) [-20709.904] (-20716.170) * [-20704.606] (-20709.606) (-20718.179) (-20712.723) -- 0:13:25
769000 -- (-20710.165) [-20703.716] (-20718.352) (-20701.811) * [-20705.332] (-20706.770) (-20704.132) (-20709.388) -- 0:13:22
770000 -- (-20703.733) (-20705.268) [-20708.767] (-20704.115) * (-20709.964) [-20711.859] (-20716.930) (-20718.751) -- 0:13:18
Average standard deviation of split frequencies: 0.000408
771000 -- (-20703.524) [-20703.826] (-20709.925) (-20712.434) * (-20708.023) (-20716.482) (-20709.191) [-20708.044] -- 0:13:14
772000 -- [-20704.044] (-20710.744) (-20710.096) (-20727.631) * (-20709.590) [-20707.930] (-20709.342) (-20713.506) -- 0:13:11
773000 -- (-20707.270) (-20710.970) (-20715.323) [-20719.599] * (-20710.196) (-20708.187) (-20709.322) [-20704.720] -- 0:13:07
774000 -- (-20708.900) (-20708.831) (-20713.861) [-20707.309] * (-20710.857) (-20707.235) [-20701.830] (-20706.065) -- 0:13:04
775000 -- (-20712.087) (-20711.870) (-20702.853) [-20702.586] * (-20708.410) (-20709.604) (-20712.592) [-20708.147] -- 0:13:00
Average standard deviation of split frequencies: 0.000675
776000 -- (-20708.826) (-20713.892) (-20711.147) [-20702.753] * [-20703.031] (-20714.177) (-20706.250) (-20710.171) -- 0:12:57
777000 -- (-20717.642) (-20705.782) (-20704.399) [-20708.571] * (-20711.307) (-20706.726) [-20713.100] (-20712.604) -- 0:12:54
778000 -- (-20709.997) (-20711.626) [-20710.180] (-20708.679) * (-20709.759) (-20704.967) [-20709.626] (-20710.540) -- 0:12:50
779000 -- (-20718.668) (-20710.890) [-20708.811] (-20707.836) * (-20712.943) (-20704.082) (-20705.026) [-20708.690] -- 0:12:46
780000 -- (-20708.069) (-20710.314) [-20707.970] (-20707.504) * (-20707.446) (-20702.240) [-20706.445] (-20704.883) -- 0:12:43
Average standard deviation of split frequencies: 0.000671
781000 -- (-20700.127) (-20706.603) (-20710.135) [-20707.825] * (-20701.111) [-20707.673] (-20706.568) (-20704.100) -- 0:12:39
782000 -- (-20708.741) [-20708.171] (-20704.938) (-20703.485) * (-20713.485) (-20706.001) (-20705.899) [-20714.187] -- 0:12:36
783000 -- (-20705.116) [-20709.314] (-20710.438) (-20705.243) * (-20711.796) (-20712.797) [-20706.226] (-20714.358) -- 0:12:32
784000 -- [-20709.632] (-20711.971) (-20712.334) (-20716.535) * (-20711.617) [-20710.908] (-20713.219) (-20706.630) -- 0:12:29
785000 -- (-20710.812) [-20707.592] (-20707.620) (-20709.349) * (-20712.267) [-20712.167] (-20707.944) (-20702.321) -- 0:12:26
Average standard deviation of split frequencies: 0.000933
786000 -- (-20715.516) (-20713.361) (-20707.322) [-20701.868] * (-20703.801) (-20714.313) [-20698.500] (-20712.768) -- 0:12:22
787000 -- (-20713.568) [-20701.605] (-20709.230) (-20708.248) * [-20708.626] (-20707.225) (-20708.016) (-20705.016) -- 0:12:18
788000 -- [-20711.344] (-20708.651) (-20704.241) (-20706.126) * (-20713.782) (-20709.181) [-20701.054] (-20710.136) -- 0:12:15
789000 -- [-20705.975] (-20704.142) (-20704.288) (-20705.798) * (-20721.072) (-20703.428) [-20708.075] (-20710.172) -- 0:12:11
790000 -- (-20705.470) (-20708.157) [-20704.484] (-20701.267) * (-20714.661) (-20712.072) (-20705.168) [-20705.363] -- 0:12:08
Average standard deviation of split frequencies: 0.001060
791000 -- (-20707.146) [-20703.306] (-20719.781) (-20710.242) * (-20703.743) (-20708.613) (-20702.062) [-20705.959] -- 0:12:05
792000 -- [-20704.106] (-20707.075) (-20703.930) (-20713.192) * (-20709.896) (-20708.990) (-20714.138) [-20708.953] -- 0:12:01
793000 -- (-20713.581) (-20711.827) (-20708.279) [-20702.232] * [-20701.670] (-20709.310) (-20707.140) (-20706.483) -- 0:11:58
794000 -- (-20708.063) (-20709.507) (-20710.402) [-20708.356] * [-20705.873] (-20711.316) (-20705.490) (-20704.928) -- 0:11:54
795000 -- (-20711.765) (-20711.416) (-20711.698) [-20708.924] * [-20702.881] (-20704.087) (-20708.130) (-20710.982) -- 0:11:50
Average standard deviation of split frequencies: 0.001184
796000 -- (-20709.538) [-20704.072] (-20711.425) (-20707.493) * (-20708.318) (-20708.203) [-20707.640] (-20717.933) -- 0:11:47
797000 -- (-20706.540) [-20706.939] (-20706.435) (-20706.330) * (-20719.015) (-20710.233) [-20703.668] (-20712.552) -- 0:11:44
798000 -- (-20732.334) [-20708.700] (-20704.350) (-20704.666) * (-20715.502) (-20705.708) [-20704.944] (-20707.947) -- 0:11:40
799000 -- (-20709.429) (-20708.039) [-20710.221] (-20715.748) * [-20710.654] (-20707.658) (-20709.279) (-20717.568) -- 0:11:37
800000 -- (-20707.844) (-20706.389) [-20699.366] (-20707.610) * (-20704.290) (-20704.506) (-20705.626) [-20711.483] -- 0:11:33
Average standard deviation of split frequencies: 0.000785
801000 -- (-20710.265) (-20707.778) [-20710.324] (-20709.505) * [-20705.356] (-20712.458) (-20706.660) (-20711.987) -- 0:11:30
802000 -- (-20709.585) (-20704.578) [-20706.389] (-20706.402) * (-20705.982) [-20700.528] (-20704.125) (-20707.856) -- 0:11:26
803000 -- (-20708.230) (-20712.120) (-20717.790) [-20708.428] * (-20709.544) [-20708.458] (-20706.654) (-20717.409) -- 0:11:22
804000 -- (-20705.710) (-20698.355) [-20716.781] (-20702.923) * (-20711.663) [-20703.197] (-20711.812) (-20703.731) -- 0:11:19
805000 -- (-20711.440) (-20708.452) [-20707.974] (-20702.958) * (-20720.305) [-20708.406] (-20709.117) (-20707.966) -- 0:11:16
Average standard deviation of split frequencies: 0.000390
806000 -- (-20711.059) [-20703.533] (-20710.039) (-20700.241) * [-20703.421] (-20706.707) (-20711.500) (-20703.131) -- 0:11:12
807000 -- (-20710.902) [-20709.861] (-20710.235) (-20703.171) * (-20714.845) (-20702.791) (-20707.764) [-20715.009] -- 0:11:09
808000 -- [-20705.989] (-20705.271) (-20705.858) (-20720.585) * (-20708.481) (-20701.316) (-20702.196) [-20710.238] -- 0:11:05
809000 -- [-20706.135] (-20712.857) (-20708.331) (-20711.927) * (-20711.854) (-20700.813) [-20700.554] (-20711.891) -- 0:11:02
810000 -- (-20709.727) (-20713.528) [-20710.008] (-20710.878) * [-20704.507] (-20707.044) (-20707.896) (-20715.551) -- 0:10:58
Average standard deviation of split frequencies: 0.000646
811000 -- (-20713.421) (-20722.381) (-20710.336) [-20706.827] * (-20704.746) [-20700.638] (-20708.074) (-20703.187) -- 0:10:55
812000 -- (-20723.099) (-20718.264) (-20704.524) [-20706.804] * (-20706.517) (-20711.240) [-20705.297] (-20710.465) -- 0:10:51
813000 -- (-20710.247) (-20714.992) [-20701.801] (-20705.450) * (-20704.592) (-20710.798) [-20706.734] (-20712.203) -- 0:10:48
814000 -- (-20702.494) (-20709.099) (-20714.020) [-20707.133] * (-20704.151) (-20707.087) [-20707.185] (-20704.374) -- 0:10:44
815000 -- (-20709.291) (-20718.867) [-20706.936] (-20712.414) * (-20714.064) [-20706.721] (-20708.812) (-20705.676) -- 0:10:41
Average standard deviation of split frequencies: 0.000642
816000 -- (-20712.390) [-20709.413] (-20716.175) (-20705.788) * (-20703.505) [-20710.496] (-20709.732) (-20706.774) -- 0:10:37
817000 -- (-20705.055) (-20708.518) (-20710.503) [-20702.016] * [-20701.224] (-20708.988) (-20714.593) (-20706.326) -- 0:10:34
818000 -- (-20710.835) [-20705.035] (-20706.196) (-20704.419) * [-20705.640] (-20710.932) (-20716.787) (-20709.559) -- 0:10:30
819000 -- [-20706.816] (-20711.626) (-20720.660) (-20704.868) * [-20708.269] (-20703.209) (-20715.796) (-20708.270) -- 0:10:27
820000 -- (-20700.503) (-20707.436) [-20711.702] (-20705.963) * (-20713.288) (-20714.857) (-20718.502) [-20701.758] -- 0:10:23
Average standard deviation of split frequencies: 0.000766
821000 -- (-20709.160) (-20706.868) (-20711.279) [-20700.355] * (-20705.303) (-20709.688) (-20721.349) [-20707.964] -- 0:10:20
822000 -- (-20704.005) [-20715.266] (-20706.342) (-20705.651) * (-20703.827) (-20716.289) [-20708.922] (-20706.047) -- 0:10:16
823000 -- (-20702.846) (-20717.467) [-20702.633] (-20715.512) * (-20707.240) [-20703.597] (-20706.508) (-20714.443) -- 0:10:13
824000 -- [-20703.003] (-20708.990) (-20706.397) (-20716.274) * (-20702.728) [-20709.754] (-20706.376) (-20708.757) -- 0:10:09
825000 -- (-20708.130) [-20708.330] (-20707.649) (-20708.047) * (-20721.002) (-20709.311) (-20707.705) [-20714.489] -- 0:10:06
Average standard deviation of split frequencies: 0.000888
826000 -- (-20710.450) [-20713.358] (-20708.375) (-20716.280) * (-20715.695) [-20711.661] (-20712.765) (-20714.680) -- 0:10:02
827000 -- (-20704.310) (-20709.081) [-20701.982] (-20712.431) * (-20708.233) (-20710.422) [-20701.370] (-20708.686) -- 0:09:59
828000 -- (-20708.532) (-20711.951) (-20714.752) [-20711.878] * (-20703.422) (-20715.659) [-20700.933] (-20716.963) -- 0:09:55
829000 -- (-20720.684) [-20707.799] (-20711.127) (-20707.246) * (-20702.261) (-20714.192) (-20715.050) [-20706.346] -- 0:09:52
830000 -- (-20722.011) (-20703.708) [-20705.168] (-20718.050) * [-20697.252] (-20711.246) (-20702.301) (-20706.751) -- 0:09:48
Average standard deviation of split frequencies: 0.000883
831000 -- (-20705.463) (-20701.736) [-20709.999] (-20703.065) * (-20704.213) (-20697.935) (-20711.262) [-20704.406] -- 0:09:45
832000 -- (-20712.641) (-20713.768) [-20706.053] (-20703.624) * (-20706.878) (-20708.945) [-20709.510] (-20710.700) -- 0:09:41
833000 -- (-20707.015) (-20710.481) (-20705.903) [-20706.296] * (-20702.524) (-20714.524) (-20708.031) [-20709.015] -- 0:09:38
834000 -- (-20714.863) (-20705.102) (-20710.526) [-20702.756] * [-20708.362] (-20706.417) (-20717.078) (-20710.455) -- 0:09:35
835000 -- (-20707.645) (-20713.970) (-20709.219) [-20701.535] * (-20712.809) (-20706.128) [-20704.413] (-20713.653) -- 0:09:31
Average standard deviation of split frequencies: 0.001128
836000 -- (-20704.265) (-20709.358) [-20702.191] (-20708.200) * (-20702.281) (-20703.520) (-20704.134) [-20704.070] -- 0:09:28
837000 -- (-20713.108) (-20712.281) (-20698.246) [-20701.296] * (-20720.396) (-20703.716) [-20706.590] (-20713.913) -- 0:09:24
838000 -- (-20710.040) (-20709.999) [-20698.521] (-20707.859) * (-20704.716) (-20700.709) (-20715.986) [-20708.123] -- 0:09:21
839000 -- (-20720.404) (-20709.131) [-20708.142] (-20703.127) * (-20704.381) (-20707.917) [-20714.583] (-20708.763) -- 0:09:17
840000 -- [-20712.663] (-20717.838) (-20706.687) (-20704.314) * (-20708.009) [-20704.474] (-20707.989) (-20702.795) -- 0:09:14
Average standard deviation of split frequencies: 0.001620
841000 -- (-20708.218) (-20707.939) (-20707.487) [-20707.893] * (-20717.658) (-20708.628) [-20703.163] (-20705.752) -- 0:09:10
842000 -- (-20709.497) (-20706.652) [-20706.911] (-20715.637) * [-20705.971] (-20718.150) (-20705.371) (-20705.925) -- 0:09:07
843000 -- (-20707.273) (-20714.632) (-20711.174) [-20714.552] * [-20707.170] (-20711.836) (-20703.851) (-20710.309) -- 0:09:03
844000 -- (-20707.522) (-20714.169) [-20707.319] (-20709.857) * (-20709.157) [-20702.344] (-20709.593) (-20713.723) -- 0:09:00
845000 -- [-20703.595] (-20707.794) (-20714.092) (-20704.292) * (-20708.718) (-20712.978) (-20710.638) [-20707.442] -- 0:08:56
Average standard deviation of split frequencies: 0.001610
846000 -- (-20718.169) (-20706.041) [-20704.994] (-20709.022) * (-20701.783) (-20708.778) [-20712.417] (-20711.960) -- 0:08:53
847000 -- (-20708.175) (-20708.081) (-20708.304) [-20704.271] * (-20706.993) (-20707.767) [-20706.057] (-20706.783) -- 0:08:49
848000 -- (-20704.475) [-20703.480] (-20704.457) (-20704.698) * [-20716.061] (-20707.646) (-20704.860) (-20710.190) -- 0:08:46
849000 -- (-20702.547) (-20704.212) [-20709.028] (-20726.115) * [-20703.041] (-20719.153) (-20703.117) (-20714.527) -- 0:08:42
850000 -- [-20711.825] (-20708.362) (-20708.387) (-20709.120) * [-20700.753] (-20702.092) (-20703.516) (-20712.936) -- 0:08:39
Average standard deviation of split frequencies: 0.001724
851000 -- (-20711.009) [-20706.056] (-20700.610) (-20705.010) * (-20703.015) (-20709.672) (-20699.001) [-20707.310] -- 0:08:35
852000 -- (-20707.672) [-20705.301] (-20702.102) (-20711.960) * (-20702.370) [-20704.978] (-20713.659) (-20709.899) -- 0:08:32
853000 -- (-20714.516) [-20698.113] (-20714.785) (-20711.232) * (-20704.194) (-20709.258) [-20709.630] (-20705.363) -- 0:08:28
854000 -- (-20704.891) (-20705.746) (-20707.027) [-20701.093] * (-20723.127) (-20709.067) (-20712.113) [-20704.109] -- 0:08:25
855000 -- [-20709.246] (-20715.526) (-20706.770) (-20711.549) * [-20709.222] (-20712.476) (-20712.513) (-20703.890) -- 0:08:21
Average standard deviation of split frequencies: 0.002325
856000 -- (-20704.345) [-20706.382] (-20704.349) (-20703.298) * (-20714.846) [-20704.177] (-20710.519) (-20713.743) -- 0:08:18
857000 -- (-20711.004) [-20706.981] (-20703.111) (-20712.158) * [-20707.932] (-20704.599) (-20705.821) (-20715.034) -- 0:08:15
858000 -- (-20708.448) [-20700.886] (-20704.998) (-20713.751) * (-20718.902) (-20708.272) [-20706.027] (-20706.750) -- 0:08:11
859000 -- (-20709.153) (-20708.215) (-20708.072) [-20709.371] * (-20713.965) (-20710.466) [-20720.635] (-20709.367) -- 0:08:08
860000 -- (-20709.352) [-20706.824] (-20703.628) (-20701.737) * (-20708.208) (-20716.120) (-20706.751) [-20709.943] -- 0:08:04
Average standard deviation of split frequencies: 0.001947
861000 -- (-20719.140) (-20715.067) [-20703.716] (-20708.365) * (-20703.581) (-20707.339) [-20708.580] (-20707.697) -- 0:08:01
862000 -- (-20709.923) [-20707.797] (-20712.638) (-20710.970) * (-20701.634) (-20711.290) [-20713.595] (-20706.121) -- 0:07:57
863000 -- (-20716.088) (-20706.661) (-20718.778) [-20707.194] * [-20706.222] (-20711.158) (-20701.095) (-20720.036) -- 0:07:54
864000 -- (-20716.202) (-20705.035) [-20700.469] (-20708.201) * [-20702.409] (-20710.264) (-20704.957) (-20717.973) -- 0:07:50
865000 -- [-20703.420] (-20704.512) (-20703.425) (-20719.986) * [-20711.046] (-20712.911) (-20707.657) (-20711.235) -- 0:07:47
Average standard deviation of split frequencies: 0.001814
866000 -- (-20709.616) (-20703.901) [-20699.913] (-20707.469) * (-20710.572) [-20702.304] (-20714.243) (-20711.767) -- 0:07:43
867000 -- [-20707.920] (-20713.488) (-20710.450) (-20705.199) * [-20702.194] (-20707.605) (-20717.231) (-20712.784) -- 0:07:40
868000 -- (-20714.651) (-20703.267) (-20705.335) [-20700.682] * (-20711.416) [-20711.842] (-20701.661) (-20707.752) -- 0:07:36
869000 -- [-20717.717] (-20703.677) (-20710.065) (-20707.481) * [-20711.266] (-20714.404) (-20710.060) (-20714.560) -- 0:07:33
870000 -- (-20709.351) (-20708.400) [-20705.751] (-20710.336) * [-20708.942] (-20704.068) (-20716.367) (-20706.369) -- 0:07:29
Average standard deviation of split frequencies: 0.002045
871000 -- [-20705.703] (-20706.296) (-20710.744) (-20704.439) * (-20711.391) (-20713.568) [-20708.398] (-20706.004) -- 0:07:26
872000 -- (-20721.822) (-20703.650) (-20721.414) [-20699.815] * (-20703.122) [-20710.380] (-20704.060) (-20705.460) -- 0:07:22
873000 -- (-20713.308) [-20710.660] (-20705.618) (-20711.402) * [-20707.976] (-20719.486) (-20711.490) (-20707.016) -- 0:07:19
874000 -- (-20714.525) (-20716.873) [-20706.620] (-20713.639) * [-20708.149] (-20709.346) (-20708.652) (-20708.348) -- 0:07:15
875000 -- (-20707.945) (-20716.053) (-20707.886) [-20705.183] * [-20704.425] (-20707.623) (-20709.804) (-20707.586) -- 0:07:12
Average standard deviation of split frequencies: 0.001674
876000 -- (-20712.318) (-20709.578) [-20706.462] (-20700.726) * (-20704.542) (-20706.593) (-20707.350) [-20704.873] -- 0:07:09
877000 -- (-20704.380) [-20707.541] (-20716.409) (-20706.356) * (-20702.206) (-20714.263) [-20704.805] (-20707.024) -- 0:07:05
878000 -- (-20704.170) [-20702.532] (-20706.283) (-20716.923) * (-20705.007) [-20701.867] (-20715.201) (-20707.213) -- 0:07:02
879000 -- (-20711.654) (-20711.343) (-20713.385) [-20701.776] * (-20701.351) (-20710.144) [-20709.102] (-20704.279) -- 0:06:58
880000 -- [-20706.612] (-20713.782) (-20700.586) (-20707.477) * (-20708.786) (-20706.551) [-20706.888] (-20703.991) -- 0:06:55
Average standard deviation of split frequencies: 0.001665
881000 -- (-20724.604) (-20716.450) (-20705.890) [-20702.909] * (-20707.958) (-20705.765) (-20713.733) [-20708.000] -- 0:06:51
882000 -- (-20703.870) (-20707.588) [-20704.782] (-20707.697) * (-20716.453) (-20713.726) [-20704.995] (-20708.746) -- 0:06:48
883000 -- (-20717.317) [-20701.071] (-20715.723) (-20707.717) * [-20707.092] (-20708.628) (-20706.114) (-20712.204) -- 0:06:44
884000 -- (-20710.494) [-20708.193] (-20712.612) (-20708.140) * (-20712.659) (-20708.014) [-20703.551] (-20712.120) -- 0:06:41
885000 -- (-20701.955) [-20699.118] (-20711.269) (-20713.216) * (-20708.445) (-20710.561) [-20704.947] (-20697.354) -- 0:06:37
Average standard deviation of split frequencies: 0.001655
886000 -- (-20702.535) [-20707.790] (-20704.644) (-20712.989) * (-20717.398) [-20708.333] (-20713.378) (-20709.807) -- 0:06:34
887000 -- (-20714.067) (-20707.736) [-20703.120] (-20709.892) * (-20706.927) (-20703.362) (-20709.567) [-20710.039] -- 0:06:30
888000 -- (-20709.008) (-20710.725) [-20700.641] (-20718.997) * (-20704.711) [-20714.135] (-20703.100) (-20699.556) -- 0:06:27
889000 -- (-20710.561) [-20699.004] (-20715.385) (-20707.405) * (-20710.635) (-20708.786) [-20709.290] (-20715.942) -- 0:06:23
890000 -- (-20713.882) (-20710.414) [-20706.209] (-20705.047) * (-20709.964) (-20706.949) (-20702.817) [-20706.545] -- 0:06:20
Average standard deviation of split frequencies: 0.001529
891000 -- [-20707.818] (-20704.195) (-20712.747) (-20717.786) * [-20702.261] (-20708.776) (-20711.488) (-20709.007) -- 0:06:17
892000 -- (-20716.508) [-20699.229] (-20704.979) (-20716.471) * [-20702.829] (-20711.825) (-20703.010) (-20715.264) -- 0:06:13
893000 -- (-20714.402) (-20707.416) (-20705.081) [-20706.536] * (-20712.067) (-20710.527) (-20704.394) [-20702.654] -- 0:06:10
894000 -- [-20711.896] (-20706.151) (-20709.683) (-20721.709) * (-20709.519) [-20701.932] (-20708.425) (-20701.662) -- 0:06:06
895000 -- (-20705.332) [-20703.952] (-20712.678) (-20708.770) * (-20710.048) [-20708.370] (-20708.979) (-20706.237) -- 0:06:03
Average standard deviation of split frequencies: 0.001520
896000 -- (-20712.145) [-20703.672] (-20704.265) (-20717.273) * (-20706.274) (-20714.384) [-20707.108] (-20706.123) -- 0:05:59
897000 -- (-20711.198) (-20708.492) [-20705.583] (-20713.936) * [-20709.043] (-20719.349) (-20709.209) (-20709.197) -- 0:05:56
898000 -- (-20706.743) (-20703.718) (-20709.277) [-20705.429] * (-20714.560) [-20719.489] (-20707.497) (-20705.767) -- 0:05:52
899000 -- (-20704.037) [-20704.942] (-20702.743) (-20721.311) * (-20700.934) [-20702.757] (-20705.938) (-20727.511) -- 0:05:49
900000 -- (-20712.470) (-20702.236) (-20711.115) [-20703.862] * [-20706.063] (-20711.039) (-20719.614) (-20719.369) -- 0:05:45
Average standard deviation of split frequencies: 0.001977
901000 -- [-20706.979] (-20707.641) (-20704.685) (-20717.767) * [-20701.773] (-20711.752) (-20710.680) (-20713.060) -- 0:05:42
902000 -- (-20712.728) (-20705.624) [-20704.465] (-20697.815) * (-20710.071) (-20719.955) [-20706.344] (-20707.388) -- 0:05:38
903000 -- (-20712.829) [-20705.003] (-20712.804) (-20699.831) * (-20705.875) (-20704.536) [-20710.186] (-20714.923) -- 0:05:35
904000 -- (-20706.960) [-20704.734] (-20709.227) (-20706.630) * [-20715.684] (-20707.783) (-20719.275) (-20712.842) -- 0:05:31
905000 -- [-20710.871] (-20707.219) (-20709.341) (-20706.217) * (-20717.583) [-20703.114] (-20711.490) (-20712.681) -- 0:05:28
Average standard deviation of split frequencies: 0.002197
906000 -- [-20705.701] (-20710.853) (-20707.661) (-20705.038) * [-20703.843] (-20705.896) (-20715.765) (-20705.367) -- 0:05:24
907000 -- (-20712.270) (-20713.162) (-20714.573) [-20699.929] * (-20709.452) (-20705.593) (-20703.247) [-20709.095] -- 0:05:21
908000 -- [-20703.406] (-20709.462) (-20712.231) (-20708.064) * (-20708.937) [-20706.184] (-20715.485) (-20717.830) -- 0:05:18
909000 -- (-20712.105) (-20717.214) (-20707.446) [-20708.613] * (-20710.060) (-20706.428) [-20701.122] (-20711.495) -- 0:05:14
910000 -- (-20727.999) (-20707.716) [-20707.690] (-20706.809) * (-20702.280) (-20708.377) (-20713.941) [-20708.586] -- 0:05:11
Average standard deviation of split frequencies: 0.002416
911000 -- (-20715.682) (-20711.929) [-20706.979] (-20702.844) * (-20709.671) (-20719.208) (-20704.781) [-20708.786] -- 0:05:07
912000 -- (-20702.682) (-20720.400) [-20705.115] (-20711.277) * (-20699.857) (-20719.003) (-20703.740) [-20706.879] -- 0:05:04
913000 -- (-20704.467) [-20714.791] (-20706.809) (-20706.963) * (-20716.349) (-20708.611) [-20703.142] (-20708.293) -- 0:05:00
914000 -- [-20707.561] (-20709.633) (-20703.569) (-20708.930) * (-20709.959) (-20706.128) [-20705.961] (-20711.368) -- 0:04:57
915000 -- (-20713.975) [-20704.698] (-20714.071) (-20701.294) * (-20707.296) [-20706.342] (-20714.260) (-20707.670) -- 0:04:53
Average standard deviation of split frequencies: 0.002630
916000 -- (-20710.585) [-20702.841] (-20706.747) (-20708.391) * (-20706.381) (-20708.555) (-20713.076) [-20709.559] -- 0:04:50
917000 -- (-20724.531) [-20709.612] (-20705.629) (-20703.715) * (-20706.009) (-20706.809) (-20712.629) [-20706.344] -- 0:04:46
918000 -- (-20710.292) (-20702.147) [-20700.263] (-20711.041) * [-20705.256] (-20710.810) (-20710.855) (-20705.516) -- 0:04:43
919000 -- [-20703.833] (-20708.106) (-20706.017) (-20708.047) * (-20705.136) [-20703.175] (-20706.679) (-20710.785) -- 0:04:39
920000 -- (-20710.637) [-20706.092] (-20702.742) (-20722.119) * [-20701.156] (-20699.224) (-20707.698) (-20708.076) -- 0:04:36
Average standard deviation of split frequencies: 0.002503
921000 -- [-20708.110] (-20711.536) (-20705.272) (-20710.159) * [-20708.089] (-20706.255) (-20709.457) (-20710.769) -- 0:04:33
922000 -- [-20701.938] (-20709.717) (-20706.069) (-20716.857) * (-20713.565) (-20712.064) [-20708.197] (-20713.711) -- 0:04:29
923000 -- (-20711.072) [-20704.514] (-20707.271) (-20709.461) * (-20709.065) (-20710.894) (-20713.693) [-20704.565] -- 0:04:26
924000 -- (-20704.602) (-20705.117) (-20704.814) [-20710.614] * (-20710.418) (-20711.744) [-20699.332] (-20704.769) -- 0:04:22
925000 -- (-20708.424) [-20714.617] (-20707.643) (-20705.752) * (-20718.309) (-20700.049) (-20711.439) [-20707.331] -- 0:04:19
Average standard deviation of split frequencies: 0.002715
926000 -- [-20699.198] (-20709.843) (-20703.763) (-20713.862) * (-20706.487) (-20708.460) (-20707.042) [-20708.039] -- 0:04:15
927000 -- (-20707.131) [-20705.583] (-20711.155) (-20703.319) * (-20707.087) (-20705.207) (-20704.128) [-20711.261] -- 0:04:12
928000 -- (-20712.746) (-20706.739) [-20710.791] (-20702.281) * (-20704.563) (-20710.375) (-20709.204) [-20709.500] -- 0:04:08
929000 -- (-20699.937) (-20714.153) (-20714.206) [-20705.611] * [-20707.742] (-20709.132) (-20706.480) (-20713.467) -- 0:04:05
930000 -- (-20711.484) (-20705.980) [-20704.386] (-20705.562) * [-20697.941] (-20704.078) (-20704.408) (-20711.617) -- 0:04:01
Average standard deviation of split frequencies: 0.002701
931000 -- [-20705.980] (-20716.405) (-20704.356) (-20705.223) * (-20710.051) [-20704.110] (-20715.311) (-20716.672) -- 0:03:58
932000 -- [-20707.228] (-20704.522) (-20706.791) (-20707.207) * [-20706.483] (-20708.181) (-20703.775) (-20709.586) -- 0:03:54
933000 -- [-20709.030] (-20708.639) (-20714.222) (-20719.396) * [-20700.921] (-20708.537) (-20706.315) (-20711.892) -- 0:03:51
934000 -- (-20709.418) (-20708.494) (-20713.553) [-20712.092] * (-20700.340) [-20710.037] (-20700.689) (-20719.473) -- 0:03:48
935000 -- (-20709.376) (-20704.053) [-20704.640] (-20705.679) * (-20707.863) (-20706.752) [-20701.543] (-20713.615) -- 0:03:44
Average standard deviation of split frequencies: 0.002798
936000 -- (-20713.556) [-20713.072] (-20709.757) (-20702.690) * (-20703.054) [-20705.345] (-20713.637) (-20706.953) -- 0:03:41
937000 -- (-20716.219) (-20711.882) [-20712.315] (-20703.403) * (-20708.977) (-20725.173) [-20708.043] (-20709.108) -- 0:03:37
938000 -- [-20706.742] (-20716.991) (-20713.155) (-20714.408) * (-20715.122) (-20714.052) [-20710.179] (-20714.553) -- 0:03:34
939000 -- (-20710.753) (-20710.710) (-20700.151) [-20701.193] * (-20708.235) (-20716.577) (-20709.977) [-20704.495] -- 0:03:30
940000 -- (-20713.566) (-20719.817) (-20705.612) [-20705.070] * (-20704.200) [-20710.738] (-20705.107) (-20707.831) -- 0:03:27
Average standard deviation of split frequencies: 0.002784
941000 -- (-20707.061) [-20701.410] (-20706.235) (-20698.227) * (-20713.791) (-20712.352) [-20705.455] (-20705.632) -- 0:03:23
942000 -- (-20710.764) (-20709.638) [-20704.840] (-20705.294) * (-20705.923) (-20708.674) (-20704.578) [-20706.078] -- 0:03:20
943000 -- (-20705.145) [-20712.426] (-20711.124) (-20704.358) * [-20704.473] (-20717.572) (-20706.560) (-20705.595) -- 0:03:16
944000 -- (-20702.886) [-20705.057] (-20708.053) (-20710.715) * (-20708.208) (-20702.317) (-20709.680) [-20705.790] -- 0:03:13
945000 -- (-20702.933) (-20711.843) (-20707.114) [-20705.019] * (-20703.478) (-20710.305) (-20708.833) [-20708.005] -- 0:03:09
Average standard deviation of split frequencies: 0.002658
946000 -- [-20699.524] (-20699.294) (-20704.457) (-20717.393) * (-20716.104) (-20706.294) [-20707.205] (-20707.310) -- 0:03:06
947000 -- (-20715.582) [-20704.413] (-20704.744) (-20714.985) * [-20712.774] (-20707.173) (-20711.267) (-20707.607) -- 0:03:03
948000 -- (-20712.307) (-20720.404) (-20705.478) [-20705.609] * (-20723.157) (-20711.929) (-20711.119) [-20699.725] -- 0:02:59
949000 -- (-20712.573) (-20714.765) (-20706.526) [-20708.090] * (-20712.595) (-20701.458) [-20703.042] (-20715.708) -- 0:02:56
950000 -- (-20707.265) (-20704.425) (-20712.560) [-20701.750] * [-20705.177] (-20709.177) (-20703.465) (-20713.428) -- 0:02:52
Average standard deviation of split frequencies: 0.002204
951000 -- (-20712.020) (-20718.098) [-20709.906] (-20705.297) * (-20713.380) [-20706.666] (-20711.232) (-20715.537) -- 0:02:49
952000 -- [-20699.428] (-20717.423) (-20707.869) (-20702.649) * (-20706.624) (-20705.097) [-20707.994] (-20712.136) -- 0:02:45
953000 -- (-20705.304) (-20703.264) [-20702.512] (-20707.689) * (-20700.367) (-20705.823) [-20699.907] (-20718.874) -- 0:02:42
954000 -- (-20709.218) (-20712.975) [-20707.232] (-20709.183) * (-20712.920) (-20711.489) (-20707.574) [-20713.080] -- 0:02:38
955000 -- (-20717.086) (-20705.190) [-20704.555] (-20707.260) * (-20707.571) (-20706.171) (-20709.598) [-20698.891] -- 0:02:35
Average standard deviation of split frequencies: 0.002082
956000 -- (-20716.007) (-20710.182) [-20707.094] (-20707.915) * (-20715.091) [-20707.804] (-20715.401) (-20707.459) -- 0:02:31
957000 -- (-20707.610) [-20703.669] (-20709.435) (-20717.022) * (-20708.136) (-20716.474) [-20703.227] (-20709.946) -- 0:02:28
958000 -- [-20701.672] (-20712.351) (-20697.637) (-20714.557) * [-20702.802] (-20725.484) (-20708.005) (-20704.360) -- 0:02:25
959000 -- (-20708.205) (-20704.405) [-20702.719] (-20703.782) * (-20703.590) (-20717.688) [-20714.234] (-20708.417) -- 0:02:21
960000 -- (-20707.218) (-20718.608) [-20704.493] (-20712.705) * (-20708.580) (-20701.036) (-20716.741) [-20703.108] -- 0:02:18
Average standard deviation of split frequencies: 0.002181
961000 -- (-20707.799) (-20711.051) (-20716.647) [-20704.122] * (-20712.702) (-20713.150) [-20702.085] (-20709.946) -- 0:02:14
962000 -- (-20719.436) [-20703.853] (-20705.638) (-20710.356) * (-20712.712) [-20704.245] (-20707.525) (-20724.861) -- 0:02:11
963000 -- (-20715.169) (-20702.660) (-20705.468) [-20712.810] * (-20722.774) (-20707.957) [-20704.015] (-20705.033) -- 0:02:07
964000 -- (-20717.241) (-20705.867) (-20709.714) [-20700.905] * [-20712.474] (-20707.934) (-20706.617) (-20707.513) -- 0:02:04
965000 -- [-20707.233] (-20711.012) (-20707.131) (-20708.523) * (-20703.618) [-20704.999] (-20701.720) (-20708.984) -- 0:02:00
Average standard deviation of split frequencies: 0.001952
966000 -- (-20711.370) (-20707.459) (-20717.013) [-20706.593] * [-20707.620] (-20706.260) (-20716.011) (-20710.315) -- 0:01:57
967000 -- (-20706.074) (-20701.020) (-20703.671) [-20710.439] * (-20711.413) [-20704.336] (-20713.106) (-20709.226) -- 0:01:53
968000 -- (-20715.410) [-20707.429] (-20716.916) (-20716.792) * (-20712.572) [-20700.216] (-20711.493) (-20702.487) -- 0:01:50
969000 -- (-20711.630) [-20710.004] (-20716.599) (-20712.141) * (-20709.574) [-20702.261] (-20711.247) (-20714.370) -- 0:01:47
970000 -- [-20710.723] (-20712.234) (-20720.131) (-20710.948) * (-20716.907) (-20709.353) (-20717.649) [-20709.442] -- 0:01:43
Average standard deviation of split frequencies: 0.002158
971000 -- (-20717.581) (-20701.403) (-20711.518) [-20709.466] * [-20705.359] (-20704.673) (-20699.747) (-20719.572) -- 0:01:40
972000 -- (-20715.729) (-20705.232) (-20716.540) [-20709.842] * (-20709.979) (-20714.798) (-20707.293) [-20707.174] -- 0:01:36
973000 -- [-20707.100] (-20714.093) (-20715.770) (-20706.048) * (-20705.526) (-20714.150) [-20705.993] (-20703.577) -- 0:01:33
974000 -- [-20706.900] (-20710.261) (-20709.764) (-20710.398) * (-20715.053) [-20713.065] (-20704.234) (-20706.683) -- 0:01:29
975000 -- [-20699.207] (-20711.777) (-20710.689) (-20707.292) * (-20713.756) (-20710.568) (-20704.048) [-20710.090] -- 0:01:26
Average standard deviation of split frequencies: 0.002147
976000 -- (-20706.477) [-20710.571] (-20712.984) (-20708.936) * (-20713.141) (-20705.820) (-20707.916) [-20711.165] -- 0:01:22
977000 -- [-20706.568] (-20714.570) (-20713.391) (-20704.597) * [-20707.371] (-20704.178) (-20721.205) (-20708.416) -- 0:01:19
978000 -- (-20706.553) (-20713.543) [-20710.927] (-20713.463) * (-20715.825) [-20708.864] (-20713.771) (-20707.637) -- 0:01:15
979000 -- (-20704.196) (-20704.283) [-20699.578] (-20709.764) * (-20712.654) (-20711.310) (-20705.684) [-20713.933] -- 0:01:12
980000 -- (-20705.376) (-20708.893) (-20709.041) [-20708.224] * (-20712.617) [-20706.732] (-20705.359) (-20710.116) -- 0:01:09
Average standard deviation of split frequencies: 0.002030
981000 -- (-20704.960) (-20710.330) (-20721.825) [-20703.394] * (-20708.230) [-20698.703] (-20719.616) (-20706.721) -- 0:01:05
982000 -- [-20709.051] (-20703.495) (-20715.294) (-20720.325) * (-20713.878) [-20701.702] (-20715.442) (-20710.392) -- 0:01:02
983000 -- [-20705.001] (-20709.249) (-20703.865) (-20709.957) * (-20716.398) [-20701.091] (-20707.625) (-20705.658) -- 0:00:58
984000 -- (-20708.946) (-20710.162) (-20705.437) [-20701.244] * [-20709.886] (-20718.179) (-20706.637) (-20706.924) -- 0:00:55
985000 -- (-20714.315) (-20705.846) (-20709.463) [-20706.527] * [-20705.226] (-20702.819) (-20712.666) (-20700.971) -- 0:00:51
Average standard deviation of split frequencies: 0.001912
986000 -- (-20712.764) [-20700.520] (-20720.552) (-20703.354) * [-20706.643] (-20702.382) (-20712.674) (-20707.521) -- 0:00:48
987000 -- [-20709.345] (-20708.566) (-20710.437) (-20712.917) * [-20709.653] (-20701.584) (-20713.189) (-20712.020) -- 0:00:44
988000 -- (-20709.833) [-20700.659] (-20703.892) (-20710.874) * (-20701.143) (-20703.444) [-20705.371] (-20706.211) -- 0:00:41
989000 -- (-20707.242) (-20710.873) (-20711.507) [-20704.828] * (-20712.285) (-20707.337) (-20712.316) [-20706.392] -- 0:00:37
990000 -- (-20708.820) (-20707.630) (-20715.963) [-20705.745] * (-20712.213) (-20705.289) (-20713.160) [-20709.835] -- 0:00:34
Average standard deviation of split frequencies: 0.001692
991000 -- [-20706.526] (-20706.668) (-20717.855) (-20705.967) * (-20705.519) [-20706.354] (-20709.527) (-20709.773) -- 0:00:31
992000 -- [-20705.819] (-20711.521) (-20709.586) (-20712.071) * (-20714.923) [-20702.164] (-20715.268) (-20708.775) -- 0:00:27
993000 -- (-20706.845) (-20713.196) [-20714.118] (-20709.380) * [-20701.905] (-20699.901) (-20713.110) (-20714.763) -- 0:00:24
994000 -- (-20708.792) (-20703.543) (-20715.164) [-20704.064] * (-20698.930) (-20712.715) [-20702.305] (-20715.327) -- 0:00:20
995000 -- (-20698.528) (-20706.777) (-20717.285) [-20712.205] * (-20704.619) [-20699.881] (-20704.736) (-20712.861) -- 0:00:17
Average standard deviation of split frequencies: 0.001998
996000 -- (-20703.429) [-20704.905] (-20705.909) (-20713.396) * (-20712.387) (-20710.609) [-20704.031] (-20702.904) -- 0:00:13
997000 -- (-20710.248) [-20708.410] (-20704.916) (-20706.982) * (-20710.358) (-20708.853) (-20708.690) [-20712.289] -- 0:00:10
998000 -- (-20712.832) (-20708.115) [-20706.637] (-20710.679) * (-20713.029) (-20708.804) (-20707.924) [-20706.567] -- 0:00:06
999000 -- (-20723.276) [-20704.188] (-20709.046) (-20702.843) * [-20706.224] (-20700.441) (-20706.119) (-20707.117) -- 0:00:03
1000000 -- (-20706.428) (-20704.566) [-20705.355] (-20706.103) * (-20710.359) (-20704.932) [-20698.186] (-20702.007) -- 0:00:00
Average standard deviation of split frequencies: 0.002303
Analysis completed in 57 mins 30 seconds
Analysis used 3446.87 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -20694.13
Likelihood of best state for "cold" chain of run 2 was -20694.23
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
22.7 % ( 35 %) Dirichlet(Revmat{all})
34.5 % ( 22 %) Slider(Revmat{all})
5.0 % ( 5 %) Dirichlet(Pi{all})
18.4 % ( 22 %) Slider(Pi{all})
23.5 % ( 18 %) Multiplier(Alpha{1,2})
34.4 % ( 19 %) Multiplier(Alpha{3})
29.6 % ( 25 %) Slider(Pinvar{all})
9.5 % ( 6 %) ExtSPR(Tau{all},V{all})
2.2 % ( 5 %) ExtTBR(Tau{all},V{all})
9.2 % ( 10 %) NNI(Tau{all},V{all})
11.7 % ( 15 %) ParsSPR(Tau{all},V{all})
25.9 % ( 20 %) Multiplier(V{all})
20.0 % ( 19 %) Nodeslider(V{all})
22.7 % ( 20 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
23.2 % ( 28 %) Dirichlet(Revmat{all})
32.9 % ( 25 %) Slider(Revmat{all})
4.8 % ( 15 %) Dirichlet(Pi{all})
18.8 % ( 24 %) Slider(Pi{all})
23.5 % ( 24 %) Multiplier(Alpha{1,2})
34.8 % ( 18 %) Multiplier(Alpha{3})
28.8 % ( 19 %) Slider(Pinvar{all})
9.1 % ( 6 %) ExtSPR(Tau{all},V{all})
2.2 % ( 2 %) ExtTBR(Tau{all},V{all})
9.0 % ( 11 %) NNI(Tau{all},V{all})
11.5 % ( 9 %) ParsSPR(Tau{all},V{all})
26.0 % ( 31 %) Multiplier(V{all})
20.1 % ( 27 %) Nodeslider(V{all})
22.6 % ( 19 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.79 0.61 0.45
2 | 166452 0.80 0.63
3 | 166942 166834 0.82
4 | 166614 166764 166394
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.79 0.61 0.46
2 | 166100 0.80 0.63
3 | 166919 165575 0.82
4 | 166059 167376 167971
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -20704.44
| 1 |
| 1 1 |
|1 1 21 2 2 1 1 11 |
| 2 1 22 2 2 1 2 1 21 |
| 2 2 2 1* 2 212 22 1 2|
| 1 2 2 22 2 11 1 1 2 1 2 1 222 |
| 1 1 2 11 2*12 1* 1 2 21 2 211 2 11 11|
|21 2 11 2 1 1 222 1 11 1 2 * |
| 1 1 2 2 2 2 |
| 2 1 1 1 1 1 2 2 |
| 1 2 |
| 1 |
| 2 2 |
| |
| 2 2 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -20709.19
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -20701.75 -20713.96
2 -20701.82 -20722.02
--------------------------------------
TOTAL -20701.79 -20721.33
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 4.351685 0.067332 3.835003 4.836499 4.339161 778.42 894.24 1.000
r(A<->C){all} 0.166626 0.000196 0.139306 0.192657 0.166200 835.91 872.40 1.001
r(A<->G){all} 0.334126 0.000333 0.298735 0.369340 0.333721 773.66 838.56 1.000
r(A<->T){all} 0.078489 0.000064 0.062328 0.093564 0.078183 888.21 966.51 1.001
r(C<->G){all} 0.100552 0.000154 0.076730 0.124932 0.100295 657.25 839.55 1.001
r(C<->T){all} 0.276275 0.000226 0.245061 0.303867 0.276503 823.92 837.46 1.000
r(G<->T){all} 0.043932 0.000047 0.030579 0.057025 0.043835 724.80 872.56 1.000
pi(A){all} 0.251961 0.000025 0.242275 0.261888 0.252037 610.68 842.07 1.000
pi(C){all} 0.175650 0.000018 0.167479 0.184059 0.175513 690.30 692.47 1.002
pi(G){all} 0.209884 0.000025 0.200788 0.219949 0.209854 770.11 825.26 1.000
pi(T){all} 0.362504 0.000033 0.351225 0.372841 0.362480 680.71 798.17 1.000
alpha{1,2} 0.214078 0.000175 0.188256 0.238779 0.213727 839.88 962.74 1.001
alpha{3} 4.470815 1.597938 2.338717 6.853983 4.232755 1103.30 1142.42 1.001
pinvar{all} 0.041776 0.000186 0.014794 0.067195 0.041903 1025.50 1081.60 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C2
4 -- C3
5 -- C4
6 -- C5
7 -- C6
8 -- C7
9 -- C8
10 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
----------------
1 -- .*********
2 -- .*........
3 -- ..*.......
4 -- ...*......
5 -- ....*.....
6 -- .....*....
7 -- ......*...
8 -- .......*..
9 -- ........*.
10 -- .........*
11 -- .**.....*.
12 -- ....*..*.*
13 -- .****.****
14 -- .*......*.
15 -- .****..***
16 -- .**.*..***
17 -- .......*.*
18 -- ....*....*
19 -- ....*..*..
----------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
11 3002 1.000000 0.000000 1.000000 1.000000 2
12 3002 1.000000 0.000000 1.000000 1.000000 2
13 3002 1.000000 0.000000 1.000000 1.000000 2
14 3002 1.000000 0.000000 1.000000 1.000000 2
15 3002 1.000000 0.000000 1.000000 1.000000 2
16 3002 1.000000 0.000000 1.000000 1.000000 2
17 1712 0.570286 0.010364 0.562958 0.577615 2
18 683 0.227515 0.002355 0.225849 0.229181 2
19 607 0.202199 0.008009 0.196536 0.207861 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.000356 0.000000 0.000000 0.001024 0.000248 1.000 2
length{all}[2] 0.008013 0.000009 0.002364 0.013568 0.007963 1.000 2
length{all}[3] 0.360952 0.001281 0.296346 0.434447 0.359688 1.000 2
length{all}[4] 0.870032 0.006021 0.720947 1.017277 0.866901 1.000 2
length{all}[5] 0.001183 0.000000 0.000025 0.002489 0.001075 1.000 2
length{all}[6] 0.000352 0.000000 0.000000 0.001033 0.000248 1.000 2
length{all}[7] 0.621187 0.003874 0.505222 0.747639 0.617355 1.001 2
length{all}[8] 0.000683 0.000000 0.000015 0.001630 0.000567 1.000 2
length{all}[9] 0.005698 0.000008 0.000534 0.010789 0.005398 1.000 2
length{all}[10] 0.000335 0.000000 0.000000 0.000999 0.000224 1.000 2
length{all}[11] 0.364676 0.002112 0.274523 0.455530 0.362423 1.000 2
length{all}[12] 0.422510 0.001979 0.339623 0.511446 0.419981 1.002 2
length{all}[13] 0.727921 0.004511 0.600285 0.857576 0.723502 1.000 2
length{all}[14] 0.346796 0.001186 0.282734 0.417210 0.345415 1.000 2
length{all}[15] 0.377920 0.002991 0.278256 0.489154 0.374439 1.000 2
length{all}[16] 0.242532 0.001908 0.157224 0.329225 0.240013 1.000 2
length{all}[17] 0.000679 0.000000 0.000002 0.001814 0.000529 1.002 2
length{all}[18] 0.000364 0.000000 0.000000 0.001084 0.000266 0.999 2
length{all}[19] 0.000337 0.000000 0.000000 0.000927 0.000231 0.999 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.002303
Maximum standard deviation of split frequencies = 0.010364
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.002
Clade credibility values:
/----------------------------------------------------------------------- C1 (1)
|
|----------------------------------------------------------------------- C5 (6)
|
| /------------ C10 (2)
| /----100----+
| | \------------ C8 (9)
| /----100---+
+ | \------------------------ C2 (3)
| |
| /----100----+ /------------------------ C4 (5)
| | | |
| | \----100---+ /------------ C7 (8)
| /----100----+ \-----57----+
| | | \------------ C9 (10)
| | |
\----100----+ \----------------------------------------------- C3 (4)
|
\----------------------------------------------------------- C6 (7)
Phylogram (based on average branch lengths):
/ C1 (1)
|
| C5 (6)
|
| / C10 (2)
| /-----------+
| | \ C8 (9)
| /------------+
+ | \------------ C2 (3)
| |
| /-------+ / C4 (5)
| | | |
| | \--------------+ C7 (8)
| /------------+ |
| | | \ C9 (10)
| | |
\------------------------+ \------------------------------ C3 (4)
|
\--------------------- C6 (7)
|----------------| 0.500 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3 trees sampled):
90 % credible set contains 3 trees
95 % credible set contains 3 trees
99 % credible set contains 3 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Wed Oct 26 00:49:04 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.09 sec, SCORE=1000, Nseq=10, Len=1296
C1 MLLILVLGVSLAAASRPECFN-PRFTLTPLNHTLNYTSIKAKVSNVLLPD
C2 -MLVILLILPLVSA-RPSCVT--IENLSYVAHNFTHVSFSMSKVSRIFPD
C3 MLLIAFILLPVVTASRPFCLGRDFDVSRVLPHNISTGSFVVNKLSTLLPD
C4 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPD
C5 MLLILVLGVSLAAASRPECFN-PRFTLTPLNHTLNYTSIKAKVSNVLLPD
C6 -MFLIFLLLSQVNADRPSCFS-SPDLTTTKQHIISNVSFYVQVKNLLLPD
C7 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPD
C8 -MLVILLMLPLVFA-RPSCVT--ISNLQYVDHNYTHRSFDMSAVSRVFPD
C9 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPD
C10 -MLVILLMLPLVFA-RPSCVT--ISNLQYVDHNYTHRSFDMSAVSRVFPD
::: .: :. . * ** *. * . *: . . :.**
C1 PYIAYSGQTLRQNLFMADMSNTILYPVTPPANGANGGFIYNTSIIPVSAG
C2 PFVAYSGQTLRQSLYIADTSNTTVYPITPPPVGGNPG-IYNLTTLPVNEG
C3 PYIAYSGQTVRQTLFVANATDTTIYPITPYKEGDRAY-YYNTSLYLVSQG
C4 PYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDG
C5 PYIAYSGQTLRQNLFMADMSNTILYPVTPPANGANGGFIYNTSIIPVSAG
C6 PYIAYSGQVLKQHLPTADLSNVIKYPITPDLVDATKGYVFNTTILPVDLG
C7 PYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDG
C8 PFVAYSGQTLKQSLYIADTSNTTVYPVTPPAVNGKPG-IYNLTILPVGDG
C9 PYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDG
C10 PFVAYSGQTLKQSLYLADTSNTTVYPVTPPAVNGKPG-IYNLTILPVGDG
*::*****.::* * *: ::. **:** :* : *. *
C1 LFVNTWMYRQPASSRAYCQEPFGVAFGDTFENDRIAILIMAPDNLGSWSA
C2 FLVHTFMYRDQPVD-MYCQEPFGVAFGTTFQNDLIAIVMIVPGQYGSWAE
C3 FFVHSYMFKNQIEG-LYCQQPFGVVFGNTFEQDRIAIVIIAPDVYGRWIT
C4 LFVHTYMYLNQPSN-MYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTA
C5 LFVNTWMYRQPASSRAYCQEPFGVAFGDTFENDRIAILIMAPDNLGSWSA
C6 VFVHTWMYRQPSSSNLYCQQPFGVAFGNTFVEDRIAVIVIAPDNLGSWVH
C7 LFVHTYMYLNQPSN-MYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTA
C8 FLVQTYMYKDQPSD-TYCQEPFGVAFGTTFEYDRIAIVTIVPGYKGSWSA
C9 LFVHTYMYLNQPSN-MYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTA
C10 FLVQTYMYKDQPSD-TYCQEPFGVAFGTTFEYDRIAIVTIVPGYKGSWSA
.:*:::*: : . ***:****.** ** * **:: :.*. * *
C1 VAPRNQTNIYLLVCSNATLCINPGFNRWGPAGSFIAPDALVDHSNSCFVN
C2 VKRQNTTNVHILVCGNATLCQYPAFNRWGPAGSIYSSDAFTTYGESCFIN
C3 ATPRSYTNVTILVCSNATICANPAFNRWGPAGDYLANNAFTEHDDSCFIN
C4 ASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVN
C5 VAPRNQTNIYLLVCSNATLCINPGFNRWGPAGSFIAPDALVDHSNSCFVN
C6 SSPRDQTTVHILVCSNATLCANPGFNRWGPAGNILVRNPLVEHDNSCFVN
C7 ASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVN
C8 VQKQTTTNVNILVCSNATLCAYPAFNRWGPAGTIYTTNDFVVYGDSCFIN
C9 ASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVN
C10 VQKQTTTNVNILVCSNATLCAYPAFNRWGPAGTIYTTNDFVVYGDSCFIN
: *.: :***.***:* *.*******. : :. :.:***:*
C1 NTFSVNISTSRISLAFLFKDGDLLIYHSGWLPTSNFEHGFSRGSHPMTYF
C2 NTFSINLNTSRLNLGFRFSDGNLYIYHSSWLPISGLNLM---LDYPLHYY
C3 NTMRIPYNTSRINLAFRFQDGNLLIYYSDWLPHGSLDLS---APWPLNFY
C4 NSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA---TDYPLHFF
C5 NTFSVNISTSRISLAFLFKDGDLLIYHSGWLPTSNFEHGFSRGSHPMTYF
C6 NSFNIPLSTARLNLAFLFKDGNLLVYHSPWLPHGDFNVN---GTYPLTYF
C7 NSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA---TDYPLHFF
C8 NTFTISINTSRLNLGFRFNDGNLYLYHSKWLPMQGLNLM---VDYPLHFL
C9 NSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA---TDYPLHFF
C10 NTFTISINTSRLNLGFRFNDGNLYLYHSKWLPMQGLNLM---VDYPLHFL
*:: : .*:*:.*.* * **:* :*:* *** .:: *: :
C1 MSLPVGGNLPRAQFFQSIVRSN-----AIDKGDGMCTNFDVNLHVAHLIN
C2 MSVGVGSNLPNMQFFQSVSRKGTPPAQGANNNDGSCLAFQNNLYLAYVTR
C3 TSVAVGGNLKYAQFFQSVVRNYNTPTQSLT--DGNCVGDLVNLYVAPLVK
C4 MSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSL
C5 MSLPVGGNLPRAQFFQSIVRSN-----AIDKGDGMCTNFDVNLHVAHLIN
C6 MTLPVGSNLRHAQYFQSVVRND----YAVA--DGKCRDFDLNLYIAPIVY
C7 MSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSL
C8 MSVGVGANLPNMQFYQAVVRQGTPPVTGADKNDANCLAFQNNLYLAYISK
C9 MSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSL
C10 MSVGVGANLPNMQFYQAVVRQGTPPVTGAYKNDANCLAFQNNLYLAYISK
:: **.** *::*:: * . :. * **::* :
C1 RDLLVSYFNNGSVANAADCADSAAEELYCVTGSFDPPTGVYPLSRYRAQV
C2 RELLVSYDDNGFPTAVADCSYDAGDELYCVTGSFTPQVGVYPLSRYRAQV
C3 RELLVQYSLAGRPINVADCALDSGEELYCVTGTFTPDAGVYSLSRYRAQT
C4 REVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQV
C5 RDLLVSYFNNGSVANAADCADSAAEELYCVTGSFDPPTGVYPLSRYRAQV
C6 KELLVQYSINGSVENAAECANSASDELYCVTGTFEPQTGVYALSRYRAQV
C7 REVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQV
C8 RDLLVSYDDNGLPIAVADCSQNAGDELYCVTGTFSPQVGVYPLSRYRALV
C9 REVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQV
C10 RDLLVSYDDNGLPIAVADCSQNAGDELYCVTGTFSPQVGVYPLSRYRALV
:::**.* * .*:*: .:.:**:****:* * ***.****** .
C1 AGFVRVTQRGSYCTPPYSVLQDPPQPVVWRRYMLYDCVFDFTVVVDSLPT
C2 SGYVQITQQGDTCVLPYSDIVRPPQPVVWRRYTVTSCSFDFEAIVNRLPT
C3 VGHVSITQQFETCDIPYAALQTPPQPIAWRRYAVSKCGFDFEAVINRLPT
C4 SDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPT
C5 AGFVRVTQRGSYCTPPYSVLQDPPQPVVWRRYMLYDCVFDFTVVVDSLPT
C6 QGFVRITQQADVCQPPYAALENPPQPVVWRRYLVRDCAFDFATVINNLPT
C7 SDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPT
C8 SDYVQISQQGSICSLPYSDILKPPQPIVWKRHTVTNCSFDFDAIVNRLPT
C9 SDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPT
C10 SDYVQISQQGSICSLPYSDILKPPQPIVWKRHTVTNCSFDFDAIVNRLPT
..* ::*: . * **: : ****:.*:*: : .* *** ::: ***
C1 HQLQCYGVSPRRLASMCYGSVTLDVMRINETHLNNLFNRVPDTFSLYNYA
C2 FELKCFGISPARLAQMCYSSVTLDLFRANTTHLANMLGGVPDLFSKYNYA
C3 FELKCFGVSPARLASMCYGKVTIDVFRINVTHLANLIAGVPDAFSKYNYA
C4 YDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYA
C5 HQLQCYGVSPRRLASMCYGSVTLDVMRINETHLNNLFNRVPDTFSLYNYA
C6 YQLHCYGVSPSRLASMCYNTITIDVMRINTTHLNNLLQKVPDAFSLYNYA
C7 YDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYA
C8 FQLKCFGVSPAKLAQMCYSSVTLDIFRANTTHLANMLGKVPDVFSKYNYA
C9 YDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYA
C10 FQLKCFGVSPAKLAQMCYSSVTLDIFRANTTHLANMLGKVPDVFSKYNYA
.:*:*:*:** :**.*** :*:*::* * ** *:: *** *: ****
C1 LPDNFYGCLHAFYLNSTAP-YAVANRFP---IKPGGRQSNSAFIDTVINA
C2 LPSNFYGCVHAYYINDTNKDYAIAQRWPATPITPGGRQPYSDYVRTVLNT
C3 LPRDFYGCVHAFYVNMSSD-YIIADSWPAVVIQPGGRQTDSSLVGTWLNS
C4 LPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNT
C5 LPDNFYGCLHAFYLNSTAP-YAVANRFP---IKPGGRQSNSAFIDTVINA
C6 IPSDFYGCIHAYYLNVTDT-YAIATQRR---ISPGGRQDDSFYINTVLGA
C7 LPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNT
C8 LPPDFYGCVHSYYINDSSRMYAIAQQWPATVIAPGGRQPYNSYVGTVLNT
C9 LPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNT
C10 LPPDFYGCVHSYYINDTSPMYAIAQQWPATVIAPGGRQPYNSYVGTVLNT
:* :****:*::*:* : * :* * ***** . : * :.:
C1 A-HYSPFSYV-YGLAVITLKPAAGSKLVCPVANDTVVITDRCVQYNLYGY
C2 P-NPSCTTLTCFGVVVISLKPASGRKLVCPSVNDTDMRTNECVKYNLYGY
C3 PAKSHCTILSCFGVAVIGLQPASGTQLVCPKQNDTTLIEDQCVTYNVYGY
C4 V-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGY
C5 A-HYSPFSYV-YGLAVITLKPAAGSKLVCPVANDTVVITDRCVQYNLYGY
C6 A-QYSGFNTLLYGLSVISLTPASGNKLVCPIANDTAVVTNQCVQYNLYGY
C7 V-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGY
C8 P-NPTCTQLTCFGVVVISLKPASGKHLVCPSANDTDLVTRECVKYNLYGY
C9 V-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGY
C10 P-NPKCTQLTCFGVVVISLKPASGKHLVCPSANDTDLVTRECVKYNLYGY
: :*: ** * **:* :**** *** : .** **:***
C1 TGTGVLSKNTSLVIPDGKVFTASSTGTIIGVSINSTTYSIMPCVTVPVSV
C2 TGTGVFN-VSTLTIPDSKLFVANGAGDIIAASVKGTVYSITPCVSVPVSV
C3 TGTGVFT-TSNLTIPDNKLFSASATGAISAVSIHNAVYAISPCVSVPVSV
C4 TGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSV
C5 TGTGVLSKNTSLVIPDGKVFTASSTGTIIGVSINSTTYSIMPCVTVPVSV
C6 TGTGVLNATTAISIPSDKVFSASDTGDIVAVRVNGTVYTIRPCVSVPISV
C7 TGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSV
C8 TGTGVFN-ESSLVIPDSKLFVASSTGDIIAAKVRGKVYSITPCVSVPISV
C9 TGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSV
C10 TGTGVFN-ESSLVIPDSKLFVASSTGDIIAAKVRGKVYSITPCVSVPISV
*****:. : : **..*:* *. :* * .. . .* * .**:**:**
C1 GYHPNFERALLFNGLSCSQRSRAVTEPVSVLWSA-----SATAQDAFDTP
C2 GYDPNFERALLFNGLACKERAVAVSMPASLFWRTVVQDNITNSVTTFDTL
C3 GFSPNFDKVLLFNGLACKERAVAVSIPASDYWMRV---RSSENDTIFDTE
C4 GYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTP
C5 GYHPNFERALLFNGLSCSQRSRAVTEPVSVLWSA-----SATAQDAFDTP
C6 GYHAGYERALLFNGLSCADRTSAITMPASTYWSTA---RAQSASNYYDTI
C7 GYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTP
C8 GYDPSFERALLFNGLSCSERSVAVSLPASDYWLAAVADNASTGVVTFDTL
C9 GYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTP
C10 GYDPSFERALLFNGLSCSERSVAVSLPASDYWVAAVADNASTGVVTFDTL
*: ..:::.******:* :*: *:. *.* * :**
C1 SGCVVNVELRNTTIVNTCAMPIGNSLCFINGSIAT----ANADSLPRLQL
C2 SGCVYNVYNATNIVVQSCSMPLGNSLCLANLTTST---VSVSRAGNLLSL
C3 SGCVYNAHNRTDLVVNECSLPLGNSLCLINDTAST-----RREASNLLTL
C4 SGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSL
C5 SGCVVNVELRNTTIVNTCAMPIGNSLCFINGSIAT----ANADSLPRLQL
C6 SGCVYNVDYNNATTVNQCVMPLGNSLCLVPNTQRV--------AGSRLTL
C7 SGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSL
C8 SGCVHNVRNATDITVPTCLMPLGNSLCLANITQPSQYGLSTTSSVNLLSL
C9 SGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSL
C10 SGCVHNVRNATDITVPTCLMPLGNSLCLANITQPSQYGLSTTSSVNLLSL
**** *. . * * :*:*****: : : * *
C1 VNYDPLYDNSTATPMTPVYWVKVPTNFTLSATEEYIQTTAPKITIDCARY
C2 VTYDPTAIAG-VKVMTPVYWISIPTNFTLGAVSEYIQTTSPKINVDCVKY
C3 VSFQPGIIAS-VKVLTPVYWVRVPTNFTLTATTEFIETTAPKITIDCARY
C4 VTYDPTAANA-VQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKY
C5 VNYDPLYDNSTATPMTPVYWVKVPTNFTLSATEEYIQTTAPKITIDCARY
C6 VNFDPMYVSDSVTSLTPIYWVNIPTNFTLAATEEFIQTTAPKMNIDCARY
C7 VTYDPTAANA-VQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKY
C8 VTYDPTFQGG-VKVMSPVYWISIPTNFTLGAITEYIQTTSPKVNVDCVKY
C9 VTYDPTAANA-VQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKY
C10 VTYDPTFQGG-VKVMSPVYWISIPTNFTLGAITEYIQTTSPKVNVDCVKY
*.::* . ::*:**: :****** * *:*:*::**:.:**.:*
C1 LCGDSSRCLNVLLHYGTFCNDINKALSRVSTILDSALLSLVKELSINTRD
C2 LCGDSERCTTVLLQYGTFCNDVNKALSEVSAIIDASMVSLVSEITADVVR
C3 LCGDSSRCLAVLEQYGTFCDDVNTALQRVNTMLDAAVVSLTSQLVSDIVP
C4 LCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVR
C5 LCGDSSRCLNVLLHYGTFCNDINKALSRVSTILDSALLSLVKELSINTRD
C6 LCGDSSRCLTVSLQYGTFCDDINKALLRVSQLLDTSLLALFKEFSTNVRP
C7 LCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVR
C8 LCGDSERCTTVLLQYGTFCDDVNKALSEVSSIIDASMISLVSEITADVVR
C9 LCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVR
C10 LCGDSERCTTVLLQYGTFCDDVNKALSEVSSIIDASMISLVSEITADVVR
*****.** * :*****:*:*.** .*. :*:::::* .:: :
C1 EVTTFSFDGDYNFTGLMGCLGPNCGAT-TYRSAFSDLLYDKVRITDPGFM
C2 S-ENAHFDTTYNFTGLLGCVGSSCSST--YRSALSDLLYNKVKVTDPGFM
C3 T-ENSNFDSTYNFTALMGCLGSSCNSK---RSAISDLLYNKVKIADPGFM
C4 N-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYNKVKVTDPGFM
C5 EVTTFSFDGDYNFTGLMGCLGPNCGAT-TYRSAFSDLLYDKVRITDPGFM
C6 E-AELSLDGAYNFTGLMGCLGSNCGGK-SHRSALSELLYNKVKVADPGFM
C7 N-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYNKVKVTDPGFM
C8 S-ENALFDTTYNFTGLLGCVGSNCNDRTTYRSALSDLLYNKVKVTDPGFM
C9 N-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYNKVKVTDPGFM
C10 S-ENALFDTTYNFTGLLGCVGSNCNDRTTYRSALSDLLYNKVKVTDPGFM
:* ****.*:**:*..*. ***:*:***:**:::*****
C1 QSYQKCIDSQWGGSIRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAV
C2 SSYQKCI-SQWGGDVRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAV
C3 DSYQKCIDSQWGGNIRDLICTQVFNGIAVLPPIVSPGMQALYTSLLVGAV
C4 QSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAV
C5 QSYQKCIDSQWGGSIRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAV
C6 SSYQKCIDSQWGGEVRDLICTQTYNGISVLPPIVAPGMQALYTSLLVGAV
C7 QSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAV
C8 SSYQKCI-SQWGGDIRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAV
C9 QSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAV
C10 SSYQKCI-SQWGGDIRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAV
.****** *****.:***:*** :***:******:*.*************
C1 ASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNAL
C2 ASAGFTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKAL
C3 ASSGYTFGITSVGVIPFATQLQFRLNGIGVTTQVLVDNQKLIASSFNNAL
C4 ASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNAL
C5 ASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNAL
C6 ASSGYTFGITSVGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNKAL
C7 ASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNAL
C8 ASAGYTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKAL
C9 ASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNAL
C10 ASAGYTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKAL
**:*:***:**.**:************:********:**:***.***:**
C1 VNIQKGFTETSIALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIF
C2 VSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIF
C3 NQIQKGFDATNSALSKIQAVINQHATQLQTLVLQLGNTFGAISSSINIIF
C4 TNIQKGFDATNEAISKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIF
C5 VNIQKGFTETSIALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIF
C6 TSIQEGFTATNQALAKMQAVINQHASQLQTLVIQLGNSFGAISSSLNEIF
C7 TNIQKGFDATNEALSKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIF
C8 VSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIF
C9 TNIQKGFDATNEALSKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIF
C10 VSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIF
.**:** *. *::*:* ****** **:*** ****:*****:*:* **
C1 SRLEGLAANAEVDRLINGRMMVLNTYVTQLLIQASEAKAQNALAAQKISE
C2 SRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVRAQALLAKQKISE
C3 SRLEGLEADAEVDRLISGRMVVLNTYVTQLLVQASRIKAQSDLALQKINE
C4 SRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISE
C5 SRLEGLAANAEVDRLINGRMMVLNTYVTQLLIQASEAKAQNALAAQKISE
C6 SRLEGLAADAEVDRLINGRMVVLNTYVTQLLIQASELRAQNQLAVQKISE
C7 SRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISE
C8 SRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVKSQALLAKQKISE
C9 SRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISE
C10 SRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVKSQALLAKQKISE
***:** *:*:*****.** :**********::*:. ::* ** ***.*
C1 CVKAQSLRNDFCGNGTHVLSIPQLAPNGVLFIHYAYTPTEYAFVQTSAGL
C2 CVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTAYAVVQTAAGL
C3 CVKSQTLRNEFCGNGTHVLSVPQLAPNGIMFIHYSYTPTQYATVQTAAGL
C4 CVKAQSLRNDFCGNGTHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGL
C5 CVKAQSLRNDFCGNGTHVLSIPQLAPNGVLFIHYAYTPTEYAFVQTSAGL
C6 CVKAQSSRNDFCGNGTHVLSIPQLAPNGVLFIHYTYRPTEYAYVQTSAGL
C7 CVKAQSLRNDFCGNGIHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGL
C8 CVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTSYALVQTAAGL
C9 CVKAQSLRNDFCGNGTHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGL
C10 CVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTSYALVQTAAGL
***:*: **:***** **:*:*******::*:**:* ** :* ***:***
C1 CHNGTGYAPRQGMFVLPNNTNMWHFTTMQFYNPVNISASNTQVLTSCSVN
C2 CFNNTGYAPVGGLFVLPNDSIYWHFTKLNFYNPVNLSNSNTQVLTTCSVN
C3 CFNGTGYAPRNGLFILPNNSNFWYFTQANFYNPVNISNSNTQVLESCSVN
C4 CYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLN
C5 CHNGTGYAPRQGMFVLPNNTNMWHFTTMQFYNPVNISASNTQVLTSCSVN
C6 CYNKTGYAPKGGMFVLPNNTNLWHFTAMNFYNPVNITVFNTQILTSCSLN
C7 CYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLN
C8 CLNNTGYAPRDGLFVLPNGSIYWQFTKMNFYNPVRLTNSNTQVLTTCSVN
C9 CYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLN
C10 CLNNTGYAPRDGLFVLPNGSIYWQFTKMNFYNPVRLTNSNTQVLTTCSVN
* * ***** *:*:***.: * ** :***** :: ***:* :*.:*
C1 YTSVNYTVLEPSVPGDYDFQKEFDKFYKNLSTIFNNTFNPNDFNFSTVDV
C2 YTAVNYTVLDPVVNSDFNFTAEFDKWYKNHSSYFNNTFNPGDFNFSTVDI
C3 YTTVNYTILSPQEPLYNNFDEEFNKFYKNLSSVFNNTFNPGAFNFSTVEL
C4 YSHVNYTVVNPSVPSDFDFEEEFNKWYKNHTSIFNNTFDPSAFNFSMVDV
C5 YTSVNYTVLEPSVPGDYDFQKEFDKFYKNLSTIFNNTFNPNDFNFSTVDV
C6 FTAVNYTVLEPLQYSDFDFDAQFEKFYKNISSHFNNTFDPNQFNFSTVDV
C7 YSHVNYTVVNPSVPSDFDFEEEFNKWYKNHSSIFNNTFDPSAFNFSMVDV
C8 YTTVNYTVLPPTDNMDFNFTAEFEKWYKNHSSQFNNTFNPGDFNFSTVDI
C9 YSHVNYTVVNPSVPSDFDFEEEFNKWYKNHSSIFNNTFDPSAFNFSMVDV
C10 YTTVNYTVLPPTDNMDFNFTAEFEKWYKNHSSQFNNTFNPGDFNFSTVDI
:: ****:: * :* :*:*:*** :: *****:*. **** *::
C1 TAQIKSLHDVVNQLNQSFIDLKKLNVYEKTIKWPWYVWLAMIAGIVGLVL
C2 ERELSTLTEVVRQLNESFIDLKKLNVYEQTIKWPWYVWLAMIAGLVGLAL
C3 QSEIATLNEVVQQLNKSFIDLKQMNVYEQTIKWPWYVWLAMIAGLVGLAL
C4 NKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLAL
C5 TAQIKSLHDVVNQLNQSFIDLKKLNVYEKTIKWPWYVWLAMIAGIVGLVL
C6 KEQLDTLTNVVKQLNESVIDLKQMNVYEQTIKWPWYVWLAMIAGIVGLVL
C7 NKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLAL
C8 QNELNTLNAVVKQLNESFIDLKKLNVYEQTIKWPWYIWLAMIAGLVGLAL
C9 NKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLAL
C10 QNELNTLNAVVKQLNESFIDLKKLNVYEQTIKWPWYIWLAMIAGLVGLAL
:: :* **.***:* ****::****:*******:*******:***.*
C1 AVIMLMCMTNCCSCFKGMCDCRRCCGSYDSYDDVYPAVRVNKKRTV
C2 AVVMLLCMTNCCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
C3 AVVMLLCMTNCCSCFKGMCSCRHC--YYDEIEDVYPAVRVHNKRTA
C4 AVVMLLCMTNCCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA
C5 AVIMLMCMTNCCSCFKGMCDCRRCCGSYDSYDDVYPAVRVNKKRTV
C6 AVVMLLCMTNCCSCFKGMCSCKQC--YYDELDDVYPAVRVHNKRTA
C7 AVVMLLCMTNCCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA
C8 AVVMLLCMTNCCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
C9 AVVMLLCMTNCCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA
C10 AVVMLLCMTNCCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
**:**:************* *: * **. :******** :***.
-- Starting log on Wed Oct 26 02:09:26 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result/original_alignment/codeml,BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C1 3888 sites
reading seq# 2 C2 3888 sites
reading seq# 3 C3 3888 sites
reading seq# 4 C4 3888 sites
reading seq# 5 C5 3888 sites
reading seq# 6 C6 3888 sites
reading seq# 7 C7 3888 sites
reading seq# 8 C8 3888 sites
reading seq# 9 C9 3888 sites
reading seq#10 C10 3888 sitesns = 10 ls = 3888
Reading sequences, sequential format..
Reading seq # 1: C1
Reading seq # 2: C2
Reading seq # 3: C3
Reading seq # 4: C4
Reading seq # 5: C5
Reading seq # 6: C6
Reading seq # 7: C7
Reading seq # 8: C8
Reading seq # 9: C9
Reading seq #10: C10
Sites with gaps or missing data are removed.
66 ambiguity characters in seq. 1
63 ambiguity characters in seq. 2
72 ambiguity characters in seq. 3
81 ambiguity characters in seq. 4
66 ambiguity characters in seq. 5
93 ambiguity characters in seq. 6
81 ambiguity characters in seq. 7
48 ambiguity characters in seq. 8
81 ambiguity characters in seq. 9
48 ambiguity characters in seq. 10
44 sites are removed. 1 15 22 23 88 115 240 241 242 273 274 275 276 277 281 282 470 479 480 481 502 511 558 635 636 637 638 639 686 687 688 689 690 691 692 693 711 802 828 829 830 858 1275 1276
Sequences read..
Counting site patterns.. 0:00
Compressing, 1117 patterns at 1252 / 1252 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 1117 patterns at 1252 / 1252 sites (100.0%), 0:00
Counting codons..
360 bytes for distance
1090192 bytes for conP
98296 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(1, 5, (((((10, 8), 2), (4, (7, 9))), 3), 6)); MP score: 3291
4360768 bytes for conP, adjusted
0.079548 0.010612 0.048826 0.091877 0.058661 0.048049 0.090127 0.030486 0.024707 0.084561 0.072656 0.080837 0.043844 0.059649 0.010252 0.035825 0.108863 0.300000 0.800601 0.368141
ntime & nrate & np: 17 2 20
Bounds (np=20):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 12.998073
np = 20
lnL0 = -26891.038253
Iterating by ming2
Initial: fx= 26891.038253
x= 0.07955 0.01061 0.04883 0.09188 0.05866 0.04805 0.09013 0.03049 0.02471 0.08456 0.07266 0.08084 0.04384 0.05965 0.01025 0.03582 0.10886 0.30000 0.80060 0.36814
1 h-m-p 0.0000 0.0000 22768.6368 ++ 24551.130680 m 0.0000 25 | 1/20
2 h-m-p 0.0000 0.0000 8392.0498 ++ 24504.118046 m 0.0000 48 | 2/20
3 h-m-p 0.0000 0.0000 16537.9807 ++ 23665.130937 m 0.0000 71 | 3/20
4 h-m-p 0.0000 0.0000 13442.1879 ++ 23408.560694 m 0.0000 94 | 3/20
5 h-m-p 0.0000 0.0000 69183.5362 ++ 23169.042273 m 0.0000 117 | 4/20
6 h-m-p 0.0000 0.0000 4288.7564 ++ 22966.454519 m 0.0000 140 | 3/20
7 h-m-p -0.0000 -0.0000 653381.4625
h-m-p: -9.71205694e-24 -4.85602847e-23 6.53381462e+05 22966.454519
.. | 3/20
8 h-m-p 0.0000 0.0000 537767.7932 ---YCYYYCC 22952.659133 6 0.0000 195 | 3/20
9 h-m-p 0.0000 0.0000 12098.9243 ++ 22833.736010 m 0.0000 218 | 4/20
10 h-m-p 0.0000 0.0000 52956.2666 ++ 22053.144738 m 0.0000 241 | 4/20
11 h-m-p 0.0000 0.0000 9013.5859 +YYYCYCCCC 21541.953513 8 0.0000 277 | 4/20
12 h-m-p 0.0000 0.0000 1682.6153 +CYYCYCCC 21507.361729 7 0.0000 312 | 3/20
13 h-m-p 0.0000 0.0000 9872.1507 +YYYYC 21504.939841 4 0.0000 340 | 3/20
14 h-m-p 0.0000 0.0000 14008.4829 YCCC 21469.485858 3 0.0000 368 | 3/20
15 h-m-p 0.0000 0.0001 4154.2247 CCCC 21440.904991 3 0.0000 397 | 3/20
16 h-m-p 0.0000 0.0000 2147.0274 +YYCCC 21411.968499 4 0.0000 427 | 3/20
17 h-m-p 0.0000 0.0001 2076.4461 +YCCC 21383.161867 3 0.0000 456 | 3/20
18 h-m-p 0.0000 0.0001 1860.2361 YC 21367.821351 1 0.0000 480 | 3/20
19 h-m-p 0.0001 0.0004 912.5449 CCCC 21353.357048 3 0.0001 509 | 3/20
20 h-m-p 0.0001 0.0005 412.6309 YC 21350.721833 1 0.0000 533 | 3/20
21 h-m-p 0.0001 0.0016 305.8539 YC 21347.476719 1 0.0001 557 | 3/20
22 h-m-p 0.0007 0.0063 48.8244 CC 21346.786623 1 0.0002 582 | 3/20
23 h-m-p 0.0002 0.0039 79.0065 YCC 21345.006238 2 0.0003 608 | 3/20
24 h-m-p 0.0002 0.0047 101.6306 +CYC 21329.807000 2 0.0010 635 | 3/20
25 h-m-p 0.0011 0.0177 92.3699 +CYCCC 21028.032196 4 0.0063 666 | 3/20
26 h-m-p 0.0008 0.0040 292.1762 +YYYYC 20349.884197 4 0.0031 694 | 3/20
27 h-m-p 0.0467 0.2336 1.9290 ++ 19982.342831 m 0.2336 717 | 3/20
28 h-m-p 0.6604 3.3019 0.5271 +YCCCC 19609.643200 4 2.0067 748 | 3/20
29 h-m-p 0.5817 2.9085 0.1231 +YYCCCC 19438.016800 5 1.8928 797 | 3/20
30 h-m-p 0.1469 0.7346 0.1409 ++ 19413.566825 m 0.7346 837 | 4/20
31 h-m-p 0.1722 3.2286 0.6009 ++YCYC 19314.587239 3 2.1238 883 | 3/20
32 h-m-p 0.0000 0.0001 11256.0665 -CYCC 19314.154233 3 0.0000 928 | 3/20
33 h-m-p 0.1187 4.2560 0.0568 +CCC 19310.132857 2 0.3880 956 | 3/20
34 h-m-p 0.7454 3.8720 0.0296 ++ 19301.128742 m 3.8720 996 | 4/20
35 h-m-p 0.2617 2.2322 0.4378 +YCCC 19278.435914 3 1.4732 1042 | 4/20
36 h-m-p 1.6000 8.0000 0.0560 ++ 19270.092670 m 8.0000 1081 | 4/20
37 h-m-p 0.5743 2.8717 0.1194 +YYCC 19265.975532 3 1.8478 1125 | 4/20
38 h-m-p 1.0347 5.1733 0.1132 +YCC 19260.450339 2 3.0862 1168 | 4/20
39 h-m-p 1.6000 8.0000 0.0650 CYC 19259.096658 2 1.2987 1210 | 4/20
40 h-m-p 0.8744 4.3722 0.0876 YCCC 19256.824531 3 1.7147 1254 | 4/20
41 h-m-p 1.4107 8.0000 0.1065 CCCC 19253.297575 3 2.3263 1299 | 4/20
42 h-m-p 1.6000 8.0000 0.0951 YCCC 19249.551622 3 3.2797 1343 | 4/20
43 h-m-p 1.6000 8.0000 0.0679 CCC 19248.649697 2 2.1298 1386 | 4/20
44 h-m-p 1.6000 8.0000 0.0146 YC 19247.200351 1 3.6709 1426 | 4/20
45 h-m-p 0.9953 8.0000 0.0540 +YCC 19244.787585 2 3.4404 1469 | 4/20
46 h-m-p 1.0137 5.0683 0.0965 +YCCC 19242.102367 3 2.9166 1514 | 3/20
47 h-m-p 0.0000 0.0001 2729.3330 -CY 19242.084667 1 0.0000 1556 | 3/20
48 h-m-p 0.0418 1.9190 0.0818 +++ 19240.490996 m 1.9190 1580 | 4/20
49 h-m-p 0.8264 8.0000 0.1899 YCCC 19239.025272 3 1.6963 1625 | 4/20
50 h-m-p 0.5067 2.5334 0.0945 +YYCCC 19237.253429 4 1.6797 1671 | 4/20
51 h-m-p 1.1753 7.3720 0.1350 CCC 19235.816548 2 1.4457 1714 | 3/20
52 h-m-p 0.0002 0.0009 927.4013 ---YC 19235.813125 1 0.0000 1757 | 3/20
53 h-m-p 0.0171 0.1470 0.0725 ++ 19235.687632 m 0.1470 1780 | 4/20
54 h-m-p 0.0761 8.0000 0.1401 ++YCC 19235.130847 2 0.8188 1825 | 4/20
55 h-m-p 1.6000 8.0000 0.0344 CC 19235.025847 1 1.3988 1866 | 4/20
56 h-m-p 1.6000 8.0000 0.0128 +YC 19234.839597 1 5.4273 1907 | 4/20
57 h-m-p 1.6000 8.0000 0.0330 +CC 19234.385108 1 5.5639 1949 | 4/20
58 h-m-p 1.6000 8.0000 0.0583 CCC 19234.101450 2 2.2415 1992 | 4/20
59 h-m-p 1.6000 8.0000 0.0369 YCC 19233.931687 2 2.8471 2034 | 4/20
60 h-m-p 1.6000 8.0000 0.0227 YC 19233.794409 1 3.8909 2074 | 4/20
61 h-m-p 1.6000 8.0000 0.0426 +YC 19233.079186 1 6.8500 2115 | 4/20
62 h-m-p 1.6000 8.0000 0.1264 YCCC 19231.917594 3 2.7894 2159 | 4/20
63 h-m-p 1.6000 8.0000 0.0505 CC 19231.734147 1 1.4812 2200 | 4/20
64 h-m-p 1.3217 8.0000 0.0566 YC 19231.673264 1 2.3603 2240 | 4/20
65 h-m-p 1.6000 8.0000 0.0116 ++ 19231.506932 m 8.0000 2279 | 4/20
66 h-m-p 1.4747 8.0000 0.0627 +CCC 19230.808325 2 5.3303 2323 | 4/20
67 h-m-p 1.6000 8.0000 0.0870 CC 19230.090771 1 2.5378 2364 | 4/20
68 h-m-p 1.6000 8.0000 0.0604 C 19230.034389 0 1.6000 2403 | 4/20
69 h-m-p 1.6000 8.0000 0.0073 ++ 19229.922842 m 8.0000 2442 | 4/20
70 h-m-p 1.4177 8.0000 0.0413 +CY 19229.268539 1 5.6173 2484 | 4/20
71 h-m-p 0.6188 3.0938 0.0599 YCCC 19228.790095 3 1.3538 2528 | 4/20
72 h-m-p 0.8055 8.0000 0.1007 YCC 19228.734637 2 0.3195 2570 | 4/20
73 h-m-p 0.5650 8.0000 0.0569 YC 19228.713848 1 0.9370 2610 | 4/20
74 h-m-p 1.6000 8.0000 0.0137 YC 19228.712827 1 0.9599 2650 | 4/20
75 h-m-p 1.6000 8.0000 0.0010 C 19228.712685 0 2.5147 2689 | 4/20
76 h-m-p 1.6000 8.0000 0.0008 ++ 19228.711329 m 8.0000 2728 | 4/20
77 h-m-p 0.2317 8.0000 0.0271 +CC 19228.706174 1 1.3661 2770 | 4/20
78 h-m-p 1.6000 8.0000 0.0031 C 19228.704792 0 1.8990 2809 | 4/20
79 h-m-p 1.6000 8.0000 0.0003 C 19228.704786 0 1.6203 2848 | 4/20
80 h-m-p 1.6000 8.0000 0.0001 ++ 19228.704776 m 8.0000 2887 | 4/20
81 h-m-p 1.6000 8.0000 0.0001 ++ 19228.704666 m 8.0000 2926 | 4/20
82 h-m-p 0.4092 8.0000 0.0023 +Y 19228.704549 0 1.0448 2966 | 4/20
83 h-m-p 1.6000 8.0000 0.0002 C 19228.704548 0 1.6517 3005 | 4/20
84 h-m-p 1.6000 8.0000 0.0000 ++ 19228.704543 m 8.0000 3044 | 4/20
85 h-m-p 0.1235 8.0000 0.0011 ++C 19228.704503 0 1.8292 3085 | 4/20
86 h-m-p 1.6000 8.0000 0.0006 Y 19228.704474 0 2.8595 3124 | 4/20
87 h-m-p 1.6000 8.0000 0.0002 C 19228.704474 0 1.2960 3163 | 4/20
88 h-m-p 1.6000 8.0000 0.0001 Y 19228.704474 0 0.8393 3202 | 4/20
89 h-m-p 0.9511 8.0000 0.0000 Y 19228.704474 0 1.5833 3241 | 4/20
90 h-m-p 1.6000 8.0000 0.0000 +Y 19228.704473 0 4.0366 3281 | 4/20
91 h-m-p 1.6000 8.0000 0.0000 ++ 19228.704471 m 8.0000 3320 | 4/20
92 h-m-p 1.3130 8.0000 0.0003 C 19228.704470 0 1.5579 3359 | 4/20
93 h-m-p 1.6000 8.0000 0.0001 -C 19228.704470 0 0.1000 3399 | 4/20
94 h-m-p 0.1111 8.0000 0.0000 --Y 19228.704470 0 0.0017 3440 | 4/20
95 h-m-p 0.0160 8.0000 0.0001 -----------C 19228.704470 0 0.0000 3490
Out..
lnL = -19228.704470
3491 lfun, 10473 eigenQcodon, 118694 P(t)
end of tree file.
Time used: 3:27
Model 2: PositiveSelection
TREE # 1
(1, 5, (((((10, 8), 2), (4, (7, 9))), 3), 6)); MP score: 3291
0.055198 0.084423 0.053976 0.098049 0.064283 0.100232 0.053434 0.056937 0.090895 0.046866 0.094079 0.093578 0.088863 0.103912 0.040032 0.078126 0.071621 1.744369 1.751265 0.558466 0.348305 1.415152
ntime & nrate & np: 17 3 22
Bounds (np=22):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 6.704697
np = 22
lnL0 = -26014.175760
Iterating by ming2
Initial: fx= 26014.175760
x= 0.05520 0.08442 0.05398 0.09805 0.06428 0.10023 0.05343 0.05694 0.09090 0.04687 0.09408 0.09358 0.08886 0.10391 0.04003 0.07813 0.07162 1.74437 1.75126 0.55847 0.34830 1.41515
1 h-m-p 0.0000 0.0000 19491.7130 ++ 21683.576520 m 0.0000 27 | 1/22
2 h-m-p 0.0000 0.0000 4401.5247 ++ 21427.469211 m 0.0000 52 | 2/22
3 h-m-p 0.0000 0.0000 421831.0752 ++ 21108.084283 m 0.0000 77 | 3/22
4 h-m-p 0.0000 0.0000 18470.9201 ++ 20976.825435 m 0.0000 102 | 4/22
5 h-m-p 0.0000 0.0000 10554.2243 ++ 20904.481965 m 0.0000 127 | 4/22
6 h-m-p 0.0000 0.0000 27418.6954 +YYCYCCCC 20631.094322 7 0.0000 164 | 4/22
7 h-m-p 0.0000 0.0001 926.0116 ++ 20540.673756 m 0.0001 189 | 4/22
8 h-m-p 0.0000 0.0000 13488.7205 +YYYCC 20504.849055 4 0.0000 220 | 4/22
9 h-m-p 0.0000 0.0006 1470.1533 +YCCCC 20354.047604 4 0.0003 253 | 4/22
10 h-m-p 0.0001 0.0003 1221.2545 +YCCC 20307.629820 3 0.0001 284 | 4/22
11 h-m-p 0.0001 0.0003 332.9965 ++ 20288.016000 m 0.0003 309 | 5/22
12 h-m-p 0.0009 0.0077 64.3776 YCC 20286.196345 2 0.0006 337 | 5/22
13 h-m-p 0.0009 0.0127 46.3661 YCC 20282.529569 2 0.0016 365 | 5/22
14 h-m-p 0.0018 0.0127 41.5951 CCC 20277.601131 2 0.0022 394 | 5/22
15 h-m-p 0.0021 0.0158 42.9587 YCC 20273.347390 2 0.0017 422 | 5/22
16 h-m-p 0.0015 0.0130 48.7687 YCCC 20259.441490 3 0.0028 452 | 5/22
17 h-m-p 0.0006 0.0031 38.9851 ++ 20169.025073 m 0.0031 477 | 4/22
18 h-m-p -0.0000 -0.0000 353.5083
h-m-p: -5.85821285e-21 -2.92910642e-20 3.53508348e+02 20169.025073
.. | 4/22
19 h-m-p 0.0000 0.0001 526196.2766 ----CYCCCC 20155.664040 5 0.0000 538 | 4/22
20 h-m-p 0.0000 0.0000 4343.4449 ++ 20147.885910 m 0.0000 563 | 5/22
21 h-m-p 0.0000 0.0000 3806.4228 ++ 20099.799209 m 0.0000 588 | 5/22
22 h-m-p 0.0000 0.0000 7848.4088 ++ 19748.240007 m 0.0000 613 | 5/22
23 h-m-p 0.0000 0.0000 6928.1466 ++ 19632.439789 m 0.0000 638 | 5/22
24 h-m-p 0.0000 0.0000 1268.2638 +YYYCYCCC 19599.620541 7 0.0000 674 | 5/22
25 h-m-p 0.0000 0.0000 3057.2282 +YYYCCC 19595.194728 5 0.0000 707 | 5/22
26 h-m-p 0.0000 0.0018 693.7245 +++YYYC 19492.926860 3 0.0006 738 | 5/22
27 h-m-p 0.0012 0.0058 231.8278 YCC 19473.410061 2 0.0009 766 | 5/22
28 h-m-p 0.0062 0.0367 32.5887 YCC 19470.622568 2 0.0042 794 | 5/22
29 h-m-p 0.0056 0.0405 24.3598 YC 19469.247697 1 0.0034 820 | 5/22
30 h-m-p 0.0076 0.0582 10.8411 YCCC 19462.872753 3 0.0169 850 | 5/22
31 h-m-p 0.0013 0.0063 24.7093 ++ 19441.797026 m 0.0063 875 | 5/22
32 h-m-p -0.0000 -0.0000 21.3053
h-m-p: -7.21302817e-19 -3.60651408e-18 2.13053242e+01 19441.797026
.. | 5/22
33 h-m-p 0.0000 0.0000 235434.3134 ---CYYCYCYC 19437.658290 7 0.0000 936 | 5/22
34 h-m-p 0.0000 0.0000 583.5108 YCYC 19436.288033 3 0.0000 965 | 4/22
35 h-m-p 0.0000 0.0000 5067.1030 +CYYC 19430.921408 3 0.0000 995 | 4/22
36 h-m-p 0.0000 0.0000 31720.3647 +CYYC 19422.968419 3 0.0000 1025 | 4/22
37 h-m-p 0.0000 0.0001 3487.3998 ++ 19391.520934 m 0.0001 1050 | 4/22
38 h-m-p 0.0000 0.0002 2142.9454 +YCCCC 19321.597027 4 0.0002 1083 | 4/22
39 h-m-p 0.0000 0.0000 8348.5752 +CCC 19313.111638 2 0.0000 1113 | 4/22
40 h-m-p 0.0002 0.0116 192.7820 ++YYYC 19268.179568 3 0.0029 1143 | 4/22
41 h-m-p 0.0095 0.0765 59.8508 YCCC 19258.144289 3 0.0065 1173 | 4/22
42 h-m-p 0.0166 0.0829 15.7969 YCC 19257.213565 2 0.0075 1201 | 4/22
43 h-m-p 0.0158 0.2856 7.4830 YC 19256.936653 1 0.0091 1227 | 4/22
44 h-m-p 0.0207 0.3787 3.2784 CC 19256.690873 1 0.0173 1254 | 4/22
45 h-m-p 0.0190 0.2645 2.9968 +YC 19254.955567 1 0.0551 1281 | 4/22
46 h-m-p 0.0062 0.0312 8.5314 ++ 19245.912457 m 0.0312 1306 | 5/22
47 h-m-p 0.0109 0.1288 24.3427 CYC 19242.487556 2 0.0114 1334 | 5/22
48 h-m-p 0.0599 0.4567 4.6506 CCC 19242.145808 2 0.0184 1363 | 5/22
49 h-m-p 0.0798 1.5659 1.0704 +CCC 19237.124490 2 0.3284 1393 | 5/22
50 h-m-p 0.0308 0.2060 11.3966 YCCC 19235.523554 3 0.0174 1423 | 5/22
51 h-m-p 0.0519 0.6044 3.8285 YC 19235.297195 1 0.0219 1449 | 5/22
52 h-m-p 0.1504 4.0149 0.5576 +CYC 19231.328239 2 0.7416 1478 | 5/22
53 h-m-p 1.2288 6.1441 0.2638 CCCC 19229.680288 3 1.7959 1526 | 5/22
54 h-m-p 0.8103 4.0516 0.4647 YCC 19229.066848 2 1.4103 1571 | 5/22
55 h-m-p 1.6000 8.0000 0.0784 CC 19228.872937 1 1.4377 1615 | 5/22
56 h-m-p 1.0645 8.0000 0.1059 CCC 19228.809938 2 1.2643 1661 | 5/22
57 h-m-p 1.6000 8.0000 0.0648 CYC 19228.758927 2 2.2558 1706 | 5/22
58 h-m-p 1.6000 8.0000 0.0429 YC 19228.724017 1 2.5922 1749 | 5/22
59 h-m-p 1.6000 8.0000 0.0134 C 19228.719881 0 1.5669 1791 | 5/22
60 h-m-p 1.6000 8.0000 0.0027 C 19228.718706 0 1.9980 1833 | 5/22
61 h-m-p 1.6000 8.0000 0.0031 +Y 19228.716549 0 4.9567 1876 | 5/22
62 h-m-p 1.6000 8.0000 0.0028 YC 19228.714488 1 3.5617 1919 | 5/22
63 h-m-p 1.6000 8.0000 0.0034 Y 19228.713832 0 2.7417 1961 | 5/22
64 h-m-p 1.6000 8.0000 0.0012 +C 19228.712882 0 6.0020 2004 | 5/22
65 h-m-p 1.6000 8.0000 0.0023 +C 19228.710441 0 6.1135 2047 | 5/22
66 h-m-p 1.6000 8.0000 0.0022 +YC 19228.706208 1 4.5001 2091 | 5/22
67 h-m-p 1.2643 8.0000 0.0079 YC 19228.704862 1 2.1174 2134 | 5/22
68 h-m-p 1.6000 8.0000 0.0037 C 19228.704502 0 1.9013 2176 | 5/22
69 h-m-p 1.6000 8.0000 0.0010 C 19228.704477 0 1.7129 2218 | 5/22
70 h-m-p 1.6000 8.0000 0.0004 C 19228.704471 0 1.9563 2260 | 5/22
71 h-m-p 1.6000 8.0000 0.0002 C 19228.704470 0 1.6841 2302 | 5/22
72 h-m-p 1.6000 8.0000 0.0001 C 19228.704470 0 0.5966 2344 | 5/22
73 h-m-p 0.7562 8.0000 0.0000 Y 19228.704470 0 0.3612 2386 | 5/22
74 h-m-p 0.5124 8.0000 0.0000 Y 19228.704470 0 0.2672 2428 | 5/22
75 h-m-p 0.3578 8.0000 0.0000 Y 19228.704470 0 0.1922 2470 | 5/22
76 h-m-p 0.2377 8.0000 0.0000 ---C 19228.704470 0 0.0009 2515
Out..
lnL = -19228.704470
2516 lfun, 10064 eigenQcodon, 128316 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -19313.370714 S = -18492.664477 -812.790517
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 1117 patterns 7:11
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did 1110 / 1117 patterns 7:16
did 1117 / 1117 patterns 7:16end of tree file.
Time used: 7:16
Model 7: beta
TREE # 1
(1, 5, (((((10, 8), 2), (4, (7, 9))), 3), 6)); MP score: 3291
0.020284 0.026807 0.037424 0.077693 0.108423 0.100792 0.022663 0.062751 0.072159 0.042296 0.042835 0.018671 0.017760 0.054895 0.045808 0.103395 0.100675 1.744372 0.808887 1.219693
ntime & nrate & np: 17 1 20
Bounds (np=20):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 8.892563
np = 20
lnL0 = -25668.195633
Iterating by ming2
Initial: fx= 25668.195633
x= 0.02028 0.02681 0.03742 0.07769 0.10842 0.10079 0.02266 0.06275 0.07216 0.04230 0.04284 0.01867 0.01776 0.05489 0.04581 0.10339 0.10068 1.74437 0.80889 1.21969
1 h-m-p 0.0000 0.0000 26195.0273 ++ 22095.443874 m 0.0000 25 | 0/20
2 h-m-p 0.0000 0.0000 5314.1858 ++ 22063.381729 m 0.0000 48 | 1/20
3 h-m-p 0.0000 0.0000 88185.6037 ++ 22035.876822 m 0.0000 71 | 2/20
4 h-m-p 0.0000 0.0000 17187.8206 ++ 21979.916892 m 0.0000 94 | 3/20
5 h-m-p 0.0000 0.0000 3918.8781 ++ 21894.574707 m 0.0000 117 | 4/20
6 h-m-p 0.0000 0.0000 8861.3388 ++ 21861.866695 m 0.0000 140 | 4/20
7 h-m-p 0.0000 0.0000 5068.2986
h-m-p: 4.32617531e-19 2.16308765e-18 5.06829865e+03 21861.866695
.. | 4/20
8 h-m-p 0.0000 0.0000 235645.2576 --YYCYYCC 21857.519778 6 0.0000 194 | 4/20
9 h-m-p 0.0000 0.0000 5560.2611 ++ 21657.109100 m 0.0000 217 | 3/20
10 h-m-p -0.0000 -0.0000 306986.1049
h-m-p: -5.76114901e-24 -2.88057450e-23 3.06986105e+05 21657.109100
.. | 3/20
11 h-m-p 0.0000 0.0000 526417.8445 --CYYCYCCC 21642.894865 7 0.0000 274 | 3/20
12 h-m-p 0.0000 0.0000 4947.9270 ++ 21578.948793 m 0.0000 297 | 4/20
13 h-m-p 0.0000 0.0000 95422.8145 ++ 20935.981402 m 0.0000 320 | 4/20
14 h-m-p 0.0000 0.0000 46545.9601 ++ 20556.145669 m 0.0000 343 | 4/20
15 h-m-p 0.0000 0.0002 15299.4060 +YYCYCY 19893.890487 5 0.0001 374 | 4/20
16 h-m-p 0.0000 0.0001 621.2388 +YCYYCYCCC 19862.119125 8 0.0001 410 | 4/20
17 h-m-p 0.0001 0.0005 728.8646 YCCCC 19845.366909 4 0.0001 440 | 4/20
18 h-m-p 0.0006 0.0077 126.8802 +YCCC 19833.395602 3 0.0016 469 | 4/20
19 h-m-p 0.0033 0.0227 61.0245 YCC 19830.256458 2 0.0020 495 | 4/20
20 h-m-p 0.0048 0.1153 25.7094 CYC 19828.884628 2 0.0046 521 | 4/20
21 h-m-p 0.0036 0.0889 33.4300 CC 19827.939571 1 0.0031 546 | 4/20
22 h-m-p 0.0032 0.0528 32.5780 CC 19827.272528 1 0.0027 571 | 4/20
23 h-m-p 0.0028 0.0956 30.8245 C 19826.658399 0 0.0028 594 | 4/20
24 h-m-p 0.0076 0.2060 11.3993 YC 19826.285010 1 0.0044 618 | 4/20
25 h-m-p 0.0157 0.2416 3.1875 +YCY 19822.244489 2 0.0485 645 | 4/20
26 h-m-p 0.0022 0.0111 12.2735 +YCYYYYCCCC 19799.403894 9 0.0100 682 | 3/20
27 h-m-p 0.0000 0.0000 37463.7317 +YYCCC 19798.476228 4 0.0000 712 | 3/20
28 h-m-p 0.0014 0.0425 6.0212 +YC 19796.874004 1 0.0132 737 | 3/20
29 h-m-p 0.0141 0.2799 5.6305 ++YYCCC 19654.471039 4 0.1910 768 | 3/20
30 h-m-p 0.0011 0.0054 154.2263 CCCCC 19631.419988 4 0.0018 799 | 3/20
31 h-m-p 0.0307 0.1536 1.8675 +YYYYYC 19586.007202 5 0.1220 828 | 3/20
32 h-m-p 0.2871 2.4285 0.7939 +CCCC 19429.982343 3 1.1406 858 | 3/20
33 h-m-p 0.2400 1.2001 0.6076 +CCCC 19372.645020 3 0.9817 905 | 3/20
34 h-m-p 0.4011 2.0054 1.0989 CCCCC 19350.811483 4 0.5313 953 | 3/20
35 h-m-p 0.7313 3.6564 0.1154 ++ 19296.735963 m 3.6564 976 | 4/20
36 h-m-p 0.5458 2.7292 0.4609 ++ 19247.196911 m 2.7292 1016 | 4/20
37 h-m-p -0.0000 -0.0000 0.2526
h-m-p: -3.51031778e-17 -1.75515889e-16 2.52617761e-01 19247.196911
.. | 4/20
38 h-m-p 0.0000 0.0000 1528.8954 +YYYYCCCC 19234.570371 7 0.0000 1102 | 3/20
39 h-m-p 0.0000 0.0000 18350.5611 +CYYCYYC 19195.603087 6 0.0000 1134 | 3/20
40 h-m-p 0.0000 0.0000 3283.9330 +YCYYCYC 19185.383803 6 0.0000 1167 | 3/20
41 h-m-p 0.0000 0.0002 410.4517 ++ 19160.526834 m 0.0002 1190 | 4/20
42 h-m-p 0.0000 0.0000 566.4342 ++ 19133.211449 m 0.0000 1213 | 5/20
43 h-m-p 0.0001 0.0012 216.0509 +YCYCCC 19103.782032 5 0.0006 1245 | 5/20
44 h-m-p 0.0004 0.0066 296.7063 +CYCCC 19042.546104 4 0.0030 1276 | 5/20
45 h-m-p 0.0122 0.0612 37.0827 CYC 19033.759344 2 0.0113 1302 | 4/20
46 h-m-p 0.0006 0.0034 725.7539 --YCCC 19033.195409 3 0.0000 1332 | 4/20
47 h-m-p 0.0002 0.0308 61.0120 ++YCCC 19027.477809 3 0.0059 1362 | 4/20
48 h-m-p 0.0073 0.0714 49.2365 YCCC 19016.746424 3 0.0147 1390 | 4/20
49 h-m-p 0.0160 0.0800 26.3801 +YCCC 18995.685688 3 0.0460 1419 | 4/20
50 h-m-p 0.0043 0.0215 31.1863 +YYCYYC 18975.906222 5 0.0189 1449 | 4/20
51 h-m-p 0.0045 0.0224 9.7503 CCCC 18975.073377 3 0.0081 1478 | 4/20
52 h-m-p 0.0085 0.0564 9.2331 CYC 18974.497480 2 0.0100 1504 | 4/20
53 h-m-p 0.0145 0.0817 6.4015 +YCCC 18972.461779 3 0.0428 1533 | 4/20
54 h-m-p 0.0238 0.1191 6.5754 YCCC 18969.661691 3 0.0486 1561 | 4/20
55 h-m-p 0.0621 0.9855 5.1482 YCCC 18961.405863 3 0.1330 1589 | 4/20
56 h-m-p 0.0605 0.3026 7.7812 YCC 18959.592289 2 0.0458 1615 | 4/20
57 h-m-p 0.0957 0.4786 2.5991 CCC 18958.817300 2 0.0844 1642 | 4/20
58 h-m-p 0.0615 0.3307 3.5695 CCC 18957.770918 2 0.0738 1669 | 4/20
59 h-m-p 0.0558 0.2788 3.1580 CYC 18957.284448 2 0.0516 1695 | 4/20
60 h-m-p 0.1608 2.4285 1.0125 +CCC 18955.804767 2 0.6724 1723 | 4/20
61 h-m-p 1.4579 7.9213 0.4670 CYC 18953.329452 2 1.5951 1749 | 4/20
62 h-m-p 1.6000 8.0000 0.1587 CC 18952.748413 1 1.9291 1790 | 4/20
63 h-m-p 1.4202 8.0000 0.2155 CCC 18952.607034 2 1.2762 1833 | 4/20
64 h-m-p 1.6000 8.0000 0.1123 CY 18952.556292 1 1.4790 1874 | 4/20
65 h-m-p 1.6000 8.0000 0.0097 C 18952.548321 0 1.7603 1913 | 4/20
66 h-m-p 1.0859 8.0000 0.0157 YC 18952.545829 1 1.8520 1953 | 4/20
67 h-m-p 1.6000 8.0000 0.0010 C 18952.545642 0 1.5359 1992 | 4/20
68 h-m-p 1.5694 8.0000 0.0010 C 18952.545633 0 1.4836 2031 | 4/20
69 h-m-p 1.6000 8.0000 0.0002 C 18952.545630 0 2.1525 2070 | 4/20
70 h-m-p 1.6000 8.0000 0.0003 C 18952.545629 0 2.0948 2109 | 4/20
71 h-m-p 1.6000 8.0000 0.0002 -Y 18952.545629 0 0.0728 2149 | 4/20
72 h-m-p 0.0772 8.0000 0.0002 Y 18952.545629 0 0.0396 2188 | 4/20
73 h-m-p 0.0406 8.0000 0.0002 C 18952.545629 0 0.0406 2227 | 4/20
74 h-m-p 0.0450 8.0000 0.0002 -N 18952.545629 0 0.0028 2267 | 4/20
75 h-m-p 0.0160 8.0000 0.0004 ++C 18952.545629 0 0.2199 2308 | 4/20
76 h-m-p 0.5974 8.0000 0.0001 ----C 18952.545629 0 0.0009 2351 | 4/20
77 h-m-p 0.0160 8.0000 0.0012 ---------C 18952.545629 0 0.0000 2399 | 4/20
78 h-m-p 0.0160 8.0000 0.0000 -------------.. | 4/20
79 h-m-p 0.0160 8.0000 0.1637 ------------- | 4/20
80 h-m-p 0.0160 8.0000 0.1637 -------------
Out..
lnL = -18952.545629
2550 lfun, 28050 eigenQcodon, 433500 P(t)
end of tree file.
Time used: 19:33
Model 8: beta&w>1
TREE # 1
(1, 5, (((((10, 8), 2), (4, (7, 9))), 3), 6)); MP score: 3291
0.109723 0.011199 0.098120 0.069533 0.025566 0.029952 0.055759 0.022631 0.091745 0.057886 0.059990 0.084384 0.055800 0.100480 0.095542 0.082154 0.095224 1.535685 0.900000 0.708242 1.739867 1.300000
ntime & nrate & np: 17 2 22
Bounds (np=22):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 9.595619
np = 22
lnL0 = -25535.759186
Iterating by ming2
Initial: fx= 25535.759186
x= 0.10972 0.01120 0.09812 0.06953 0.02557 0.02995 0.05576 0.02263 0.09175 0.05789 0.05999 0.08438 0.05580 0.10048 0.09554 0.08215 0.09522 1.53569 0.90000 0.70824 1.73987 1.30000
1 h-m-p 0.0000 0.0000 20728.8428 ++ 23359.520742 m 0.0000 49 | 1/22
2 h-m-p 0.0000 0.0000 6240.2694 ++ 22593.556390 m 0.0000 96 | 1/22
3 h-m-p 0.0000 0.0000 9609.4215 ++ 22559.763058 m 0.0000 142 | 2/22
4 h-m-p 0.0000 0.0000 12299.7277 ++ 22343.804041 m 0.0000 188 | 1/22
5 h-m-p -0.0000 -0.0000 64916.7960
h-m-p: -3.01310588e-23 -1.50655294e-22 6.49167960e+04 22343.804041
.. | 1/22
6 h-m-p 0.0000 0.0000 73634.3716 CYYCYCYC 22329.892821 7 0.0000 287 | 1/22
7 h-m-p 0.0000 0.0000 9479.0629 ++ 22136.449241 m 0.0000 333 | 2/22
8 h-m-p 0.0000 0.0000 6655.7662 ++ 22077.785700 m 0.0000 379 | 3/22
9 h-m-p 0.0000 0.0000 16008.1641 ++ 21997.687627 m 0.0000 424 | 3/22
10 h-m-p 0.0000 0.0000 40822.7897 ++ 21986.502468 m 0.0000 468 | 4/22
11 h-m-p 0.0000 0.0001 2670.9185 ++ 21850.889117 m 0.0001 512 | 3/22
12 h-m-p -0.0000 -0.0000 8629801.0728
h-m-p: -3.06351940e-25 -1.53175970e-24 8.62980107e+06 21850.889117
.. | 3/22
13 h-m-p 0.0000 0.0000 195274.6453 ---YCYYCCC 21833.714085 6 0.0000 609 | 3/22
14 h-m-p 0.0000 0.0000 8582.9953 ++ 21687.715351 m 0.0000 653 | 3/22
15 h-m-p 0.0000 0.0000 446605.1686 ++ 21447.647072 m 0.0000 697 | 4/22
16 h-m-p 0.0000 0.0000 7383.5153 ++ 21360.991252 m 0.0000 741 | 4/22
17 h-m-p 0.0000 0.0000 5110.5118 +CYCCC 21148.430478 4 0.0000 792 | 4/22
18 h-m-p 0.0000 0.0000 4844.0769 ++ 21044.145110 m 0.0000 835 | 4/22
19 h-m-p -0.0000 -0.0000 13016.6358
h-m-p: -6.79975359e-23 -3.39987679e-22 1.30166358e+04 21044.145110
.. | 4/22
20 h-m-p 0.0000 0.0000 6804.3836 ++ 20713.529125 m 0.0000 918 | 3/22
21 h-m-p 0.0000 0.0000 986473.0603
h-m-p: 5.82593281e-25 2.91296641e-24 9.86473060e+05 20713.529125
.. | 3/22
22 h-m-p 0.0000 0.0000 116670.8764 --CYYCYCYC 20699.698966 7 0.0000 1015 | 3/22
23 h-m-p 0.0000 0.0000 4568.4827 ++ 20639.479859 m 0.0000 1059 | 3/22
24 h-m-p 0.0000 0.0000 9086.3585 ++ 20614.996186 m 0.0000 1103 | 3/22
25 h-m-p 0.0000 0.0000 7143.3631 ++ 20489.921791 m 0.0000 1147 | 3/22
26 h-m-p 0.0000 0.0000 8611.0683 ++ 20385.104958 m 0.0000 1191 | 3/22
27 h-m-p 0.0000 0.0000 3117.7557 ++ 20252.100540 m 0.0000 1235 | 3/22
28 h-m-p -0.0000 -0.0000 2728.8424
h-m-p: -5.87624867e-22 -2.93812433e-21 2.72884237e+03 20252.100540
.. | 3/22
29 h-m-p 0.0000 0.0000 3658.9167 ++ 20180.188097 m 0.0000 1320 | 3/22
30 h-m-p -0.0000 -0.0000 3016153.2164
h-m-p: -5.93683017e-25 -2.96841509e-24 3.01615322e+06 20180.188097
.. | 3/22
31 h-m-p 0.0000 0.0000 111672.6123 --CYCCCC 20176.042928 5 0.0000 1417 | 3/22
32 h-m-p 0.0000 0.0000 3903.0427 ++ 20063.652330 m 0.0000 1461 | 4/22
33 h-m-p 0.0000 0.0000 7138.1123 +YYCYYCC 20050.404019 6 0.0000 1514 | 3/22
34 h-m-p 0.0000 0.0000 21876.0412 +YYYCC 20048.694997 4 0.0000 1563 | 3/22
35 h-m-p 0.0000 0.0000 8408.3062 +CYCCC 19917.222710 4 0.0000 1615 | 3/22
36 h-m-p 0.0000 0.0001 2412.4282 ++ 19762.682609 m 0.0001 1659 | 3/22
37 h-m-p -0.0000 -0.0000 3901.3777
h-m-p: -3.39891483e-22 -1.69945742e-21 3.90137767e+03 19762.682609
.. | 3/22
38 h-m-p 0.0000 0.0000 2895.5937 ++ 19743.658574 m 0.0000 1744 | 3/22
39 h-m-p 0.0000 0.0000 562472.2188 +CCCC 19696.595901 3 0.0000 1795 | 3/22
40 h-m-p 0.0000 0.0000 4561.1842 ++ 19681.076934 m 0.0000 1839 | 4/22
41 h-m-p 0.0000 0.0000 2900.8956 ++ 19658.419192 m 0.0000 1883 | 4/22
42 h-m-p 0.0000 0.0005 11460.2866 +CYCCC 19506.092571 4 0.0000 1934 | 4/22
43 h-m-p 0.0000 0.0002 1038.3871 ++ 19369.320197 m 0.0002 1977 | 3/22
44 h-m-p 0.0000 0.0000 41564.9211
h-m-p: 5.12994964e-23 2.56497482e-22 4.15649211e+04 19369.320197
.. | 3/22
45 h-m-p 0.0000 0.0000 116962.7362 ---YYCCCCC 19355.092080 6 0.0000 2075 | 3/22
46 h-m-p 0.0000 0.0000 2520.0593 ++ 19347.337624 m 0.0000 2119 | 4/22
47 h-m-p 0.0000 0.0000 4672.0735 +CYCCC 19262.254579 4 0.0000 2171 | 4/22
48 h-m-p 0.0000 0.0000 4025.4858 ++ 19236.752722 m 0.0000 2214 | 4/22
49 h-m-p 0.0000 0.0000 571.4454 +YYYYYCCCC 19227.779016 8 0.0000 2269 | 3/22
50 h-m-p 0.0000 0.0000 5305.3438 +YYYC 19226.179580 3 0.0000 2316 | 3/22
51 h-m-p 0.0000 0.0000 5228.4347 ++ 19209.492077 m 0.0000 2360 | 3/22
52 h-m-p 0.0000 0.0001 12047.7131 ++ 19088.498267 m 0.0001 2404 | 4/22
53 h-m-p 0.0001 0.0005 1949.9871 CYCCC 19045.767284 4 0.0001 2455 | 4/22
54 h-m-p 0.0027 0.0138 87.8707 CCCCC 19032.726446 4 0.0033 2506 | 4/22
55 h-m-p 0.0028 0.0139 72.1475 YCCC 19021.426868 3 0.0064 2554 | 4/22
56 h-m-p 0.0012 0.0061 54.7624 ++ 19015.432092 m 0.0061 2597 | 4/22
57 h-m-p 0.0000 0.0000 26.4750
h-m-p: 0.00000000e+00 0.00000000e+00 2.64750109e+01 19015.432092
.. | 4/22
58 h-m-p 0.0000 0.0000 1250.7096 +YYYYYYC 19012.641268 6 0.0000 2687 | 4/22
59 h-m-p 0.0000 0.0000 1345.2291 ++ 19011.677139 m 0.0000 2730 | 5/22
60 h-m-p 0.0000 0.0000 3683.6985 ++ 19010.685653 m 0.0000 2773 | 5/22
61 h-m-p 0.0000 0.0000 533.4494
h-m-p: 0.00000000e+00 0.00000000e+00 5.33449443e+02 19010.685653
.. | 5/22
62 h-m-p 0.0000 0.0000 833.0562 +YYCCC 19009.836206 4 0.0000 2861 | 5/22
63 h-m-p 0.0000 0.0000 1840.3179 YCYCC 19008.689233 4 0.0000 2909 | 5/22
64 h-m-p 0.0000 0.0000 1632.1542 YCYCCC 19000.515520 5 0.0000 2959 | 5/22
65 h-m-p 0.0000 0.0000 134.4402 ++ 19000.364920 m 0.0000 3001 | 4/22
66 h-m-p 0.0000 0.0000 746.6822
h-m-p: 0.00000000e+00 0.00000000e+00 7.46682176e+02 19000.364920
.. | 4/22
67 h-m-p 0.0000 0.0054 418.0741 CCYC 18998.994382 3 0.0000 3088 | 4/22
68 h-m-p 0.0000 0.0000 1080.9946 YCYC 18998.400270 3 0.0000 3135 | 4/22
69 h-m-p 0.0000 0.0000 2971.5107 CCC 18997.879820 2 0.0000 3182 | 4/22
70 h-m-p 0.0000 0.0000 361.3477 ++ 18996.463595 m 0.0000 3225 | 5/22
71 h-m-p 0.0001 0.0010 68.1026 +YYCC 18993.640543 3 0.0004 3273 | 5/22
72 h-m-p 0.0003 0.0029 81.2630 YC 18992.024096 1 0.0007 3316 | 5/22
73 h-m-p 0.0002 0.0132 282.3757 +YCCC 18980.883534 3 0.0018 3364 | 5/22
74 h-m-p 0.0074 0.0369 66.1083 YCCCC 18977.102004 4 0.0036 3413 | 4/22
75 h-m-p 0.0029 0.0154 83.0781 ---YCC 18977.058193 2 0.0000 3461 | 4/22
76 h-m-p 0.0002 0.1082 45.7275 +++YCCC 18965.745421 3 0.0253 3512 | 4/22
77 h-m-p 0.0371 0.1855 21.2571 YCCC 18963.367617 3 0.0169 3560 | 4/22
78 h-m-p 0.0246 0.2969 14.6291 CCC 18960.989765 2 0.0349 3607 | 4/22
79 h-m-p 0.0889 1.3235 5.7378 CC 18959.488868 1 0.0794 3652 | 4/22
80 h-m-p 0.0560 0.3209 8.1353 CCC 18958.863123 2 0.0217 3699 | 4/22
81 h-m-p 0.0396 0.2952 4.4565 CC 18957.528451 1 0.0575 3744 | 4/22
82 h-m-p 0.0211 0.1053 6.8534 +YCCC 18954.457573 3 0.0575 3793 | 4/22
83 h-m-p 0.0061 0.0303 10.5161 +YYCC 18952.813331 3 0.0206 3841 | 4/22
84 h-m-p 0.1058 1.4295 2.0470 CCC 18952.028647 2 0.1487 3888 | 4/22
85 h-m-p 0.0942 0.4709 2.8301 +YC 18948.892232 1 0.3073 3933 | 4/22
86 h-m-p 0.0712 0.3559 4.5506 CYC 18947.973652 2 0.0806 3979 | 4/22
87 h-m-p 0.2140 1.3195 1.7131 YCCC 18946.393667 3 0.4853 4027 | 4/22
88 h-m-p 0.3064 1.5321 1.4651 YCCC 18944.885265 3 0.7137 4075 | 4/22
89 h-m-p 0.6277 3.1383 1.3073 CCC 18944.000747 2 0.5993 4122 | 4/22
90 h-m-p 1.6000 8.0000 0.3482 CY 18943.552926 1 1.6984 4167 | 4/22
91 h-m-p 0.7539 3.7695 0.3421 YCC 18943.342383 2 1.4324 4213 | 4/22
92 h-m-p 1.6000 8.0000 0.1797 YC 18943.130591 1 3.2514 4257 | 4/22
93 h-m-p 1.6000 8.0000 0.0488 CC 18943.055529 1 1.9702 4302 | 4/22
94 h-m-p 1.6000 8.0000 0.0389 YC 18943.018547 1 3.9972 4346 | 4/22
95 h-m-p 1.6000 8.0000 0.0492 CC 18943.002138 1 2.0448 4391 | 4/22
96 h-m-p 1.6000 8.0000 0.0147 YC 18942.995209 1 3.6429 4435 | 4/22
97 h-m-p 1.6000 8.0000 0.0045 C 18942.994445 0 1.8038 4478 | 4/22
98 h-m-p 1.4607 8.0000 0.0056 C 18942.994316 0 1.7420 4521 | 4/22
99 h-m-p 1.6000 8.0000 0.0021 C 18942.994272 0 1.7007 4564 | 4/22
100 h-m-p 1.6000 8.0000 0.0008 C 18942.994266 0 1.3817 4607 | 4/22
101 h-m-p 1.6000 8.0000 0.0004 Y 18942.994266 0 0.8286 4650 | 4/22
102 h-m-p 1.1343 8.0000 0.0003 Y 18942.994266 0 0.6677 4693 | 4/22
103 h-m-p 1.6000 8.0000 0.0001 Y 18942.994265 0 1.2228 4736 | 4/22
104 h-m-p 1.6000 8.0000 0.0000 ++ 18942.994265 m 8.0000 4779 | 4/22
105 h-m-p 1.2084 8.0000 0.0002 ------C 18942.994265 0 0.0001 4828
Out..
lnL = -18942.994265
4829 lfun, 57948 eigenQcodon, 903023 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -19934.540966 S = -19416.325256 -552.017830
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 1117 patterns 45:03
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did 1117 / 1117 patterns 45:22end of tree file.
Time used: 45:23
The loglikelihoods for models M1, M2, M7 and M8 are -19228.704470 -19228.704470 -18952.545629 -18942.994265 respectively
The loglikelihood for model M8 is significantly different from that for M7. Twice the difference is 19.102728
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MLLILVLGVSLAAASRPECFN-PRFTLTPLNHTLNYTSIKAKVSNVLLPDPYIAYSGQTL
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 -MLVILLILPLVSA-RPSCVT--IENLSYVAHNFTHVSFSMSKVSRIFPDPFVAYSGQTL
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MLLIAFILLPVVTASRPFCLGRDFDVSRVLPHNISTGSFVVNKLSTLLPDPYIAYSGQTV
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPDPYVAYSGQTI
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MLLILVLGVSLAAASRPECFN-PRFTLTPLNHTLNYTSIKAKVSNVLLPDPYIAYSGQTL
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 -MFLIFLLLSQVNADRPSCFS-SPDLTTTKQHIISNVSFYVQVKNLLLPDPYIAYSGQVL
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPDPYVAYSGQTI
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 -MLVILLMLPLVFA-RPSCVT--ISNLQYVDHNYTHRSFDMSAVSRVFPDPFVAYSGQTL
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPDPYVAYSGQTI
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 -MLVILLMLPLVFA-RPSCVT--ISNLQYVDHNYTHRSFDMSAVSRVFPDPFVAYSGQTL
::: .: :. . * ** *. * . *: . . :.***::*****.:
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 RQNLFMADMSNTILYPVTPPANGANGGFIYNTSIIPVSAGLFVNTWMYRQPASSRAYCQE
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 RQSLYIADTSNTTVYPITPPPVGGNPG-IYNLTTLPVNEGFLVHTFMYRDQPVD-MYCQE
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 RQTLFVANATDTTIYPITPYKEGDRAY-YYNTSLYLVSQGFFVHSYMFKNQIEG-LYCQQ
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 RQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDGLFVHTYMYLNQPSN-MYCQD
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 RQNLFMADMSNTILYPVTPPANGANGGFIYNTSIIPVSAGLFVNTWMYRQPASSRAYCQE
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 KQHLPTADLSNVIKYPITPDLVDATKGYVFNTTILPVDLGVFVHTWMYRQPSSSNLYCQQ
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 RQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDGLFVHTYMYLNQPSN-MYCQD
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 KQSLYIADTSNTTVYPVTPPAVNGKPG-IYNLTILPVGDGFLVQTYMYKDQPSD-TYCQE
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 RQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDGLFVHTYMYLNQPSN-MYCQD
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 KQSLYLADTSNTTVYPVTPPAVNGKPG-IYNLTILPVGDGFLVQTYMYKDQPSD-TYCQE
:* * *: ::. **:** :* : *. *.:*:::*: : . ***:
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 PFGVAFGDTFENDRIAILIMAPDNLGSWSAVAPRNQTNIYLLVCSNATLCINPGFNRWGP
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 PFGVAFGTTFQNDLIAIVMIVPGQYGSWAEVKRQNTTNVHILVCGNATLCQYPAFNRWGP
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 PFGVVFGNTFEQDRIAIVIIAPDVYGRWITATPRSYTNVTILVCSNATICANPAFNRWGP
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 PFGVAFGTTFEQDHIAIVVIAPDNRGSWTAASKRNVTTVHILVCSNATLCAYPAFNRWGP
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 PFGVAFGDTFENDRIAILIMAPDNLGSWSAVAPRNQTNIYLLVCSNATLCINPGFNRWGP
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 PFGVAFGNTFVEDRIAVIVIAPDNLGSWVHSSPRDQTTVHILVCSNATLCANPGFNRWGP
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 PFGVAFGTTFEQDHIAIVVIAPDNRGSWTAASKRNVTTVHILVCSNATLCAYPAFNRWGP
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 PFGVAFGTTFEYDRIAIVTIVPGYKGSWSAVQKQTTTNVNILVCSNATLCAYPAFNRWGP
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 PFGVAFGTTFEQDHIAIVVIAPDNRGSWTAASKRNVTTVHILVCSNATLCAYPAFNRWGP
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 PFGVAFGTTFEYDRIAIVTIVPGYKGSWSAVQKQTTTNVNILVCSNATLCAYPAFNRWGP
****.** ** * **:: :.*. * * : *.: :***.***:* *.******
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 AGSFIAPDALVDHSNSCFVNNTFSVNISTSRISLAFLFKDGDLLIYHSGWLPTSNFEHGF
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 AGSIYSSDAFTTYGESCFINNTFSINLNTSRLNLGFRFSDGNLYIYHSSWLPISGLNLM-
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 AGDYLANNAFTEHDDSCFINNTMRIPYNTSRINLAFRFQDGNLLIYYSDWLPHGSLDLS-
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ASSIYASDAFVDHGNSCFVNNSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA-
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 AGSFIAPDALVDHSNSCFVNNTFSVNISTSRISLAFLFKDGDLLIYHSGWLPTSNFEHGF
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 AGNILVRNPLVEHDNSCFVNNSFNIPLSTARLNLAFLFKDGNLLVYHSPWLPHGDFNVN-
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 ASSIYASDAFVDHGNSCFVNNSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA-
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 AGTIYTTNDFVVYGDSCFINNTFTISINTSRLNLGFRFNDGNLYLYHSKWLPMQGLNLM-
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 ASSIYASDAFVDHGNSCFVNNSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA-
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 AGTIYTTNDFVVYGDSCFINNTFTISINTSRLNLGFRFNDGNLYLYHSKWLPMQGLNLM-
*. : :. :.:***:**:: : .*:*:.*.* * **:* :*:* *** .::
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 SRGSHPMTYFMSLPVGGNLPRAQFFQSIVRSN-----AIDKGDGMCTNFDVNLHVAHLIN
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 --LDYPLHYYMSVGVGSNLPNMQFFQSVSRKGTPPAQGANNNDGSCLAFQNNLYLAYVTR
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 --APWPLNFYTSVAVGGNLKYAQFFQSVVRNYNTPTQSLT--DGNCVGDLVNLYVAPLVK
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 --TDYPLHFFMSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSL
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 SRGSHPMTYFMSLPVGGNLPRAQFFQSIVRSN-----AIDKGDGMCTNFDVNLHVAHLIN
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 --GTYPLTYFMTLPVGSNLRHAQYFQSVVRND----YAVA--DGKCRDFDLNLYIAPIVY
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 --TDYPLHFFMSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSL
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 --VDYPLHFLMSVGVGANLPNMQFYQAVVRQGTPPVTGADKNDANCLAFQNNLYLAYISK
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 --TDYPLHFFMSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSL
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 --VDYPLHFLMSVGVGANLPNMQFYQAVVRQGTPPVTGAYKNDANCLAFQNNLYLAYISK
*: : :: **.** *::*:: * . :. * **::* :
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 RDLLVSYFNNGSVANAADCADSAAEELYCVTGSFDPPTGVYPLSRYRAQVAGFVRVTQRG
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 RELLVSYDDNGFPTAVADCSYDAGDELYCVTGSFTPQVGVYPLSRYRAQVSGYVQITQQG
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 RELLVQYSLAGRPINVADCALDSGEELYCVTGTFTPDAGVYSLSRYRAQTVGHVSITQQF
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 REVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQVSDYVHITQQS
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 RDLLVSYFNNGSVANAADCADSAAEELYCVTGSFDPPTGVYPLSRYRAQVAGFVRVTQRG
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 KELLVQYSINGSVENAAECANSASDELYCVTGTFEPQTGVYALSRYRAQVQGFVRITQQA
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 REVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQVSDYVHITQQS
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 RDLLVSYDDNGLPIAVADCSQNAGDELYCVTGTFSPQVGVYPLSRYRALVSDYVQISQQG
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 REVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQVSDYVHITQQS
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 RDLLVSYDDNGLPIAVADCSQNAGDELYCVTGTFSPQVGVYPLSRYRALVSDYVQISQQG
:::**.* * .*:*: .:.:**:****:* * ***.****** . ..* ::*:
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 SYCTPPYSVLQDPPQPVVWRRYMLYDCVFDFTVVVDSLPTHQLQCYGVSPRRLASMCYGS
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 DTCVLPYSDIVRPPQPVVWRRYTVTSCSFDFEAIVNRLPTFELKCFGISPARLAQMCYSS
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ETCDIPYAALQTPPQPIAWRRYAVSKCGFDFEAVINRLPTFELKCFGVSPARLASMCYGK
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 QACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPTYDLKCYGVSPARLAQMCYAG
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 SYCTPPYSVLQDPPQPVVWRRYMLYDCVFDFTVVVDSLPTHQLQCYGVSPRRLASMCYGS
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 DVCQPPYAALENPPQPVVWRRYLVRDCAFDFATVINNLPTYQLHCYGVSPSRLASMCYNT
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 QACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPTYDLKCYGVSPARLAQMCYAG
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 SICSLPYSDILKPPQPIVWKRHTVTNCSFDFDAIVNRLPTFQLKCFGVSPAKLAQMCYSS
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 QACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPTYDLKCYGVSPARLAQMCYAG
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 SICSLPYSDILKPPQPIVWKRHTVTNCSFDFDAIVNRLPTFQLKCFGVSPAKLAQMCYSS
. * **: : ****:.*:*: : .* *** ::: ***.:*:*:*:** :**.***
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VTLDVMRINETHLNNLFNRVPDTFSLYNYALPDNFYGCLHAFYLNSTAP-YAVANRFP--
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VTLDLFRANTTHLANMLGGVPDLFSKYNYALPSNFYGCVHAYYINDTNKDYAIAQRWPAT
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VTIDVFRINVTHLANLIAGVPDAFSKYNYALPRDFYGCVHAFYVNMSSD-YIIADSWPAV
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VTLDVMRINKTHYSNLIGNVPDLFTKYNYALPTNFYGCVHAYYINVTDGRYALATHYPAT
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VTLDVMRINETHLNNLFNRVPDTFSLYNYALPDNFYGCLHAFYLNSTAP-YAVANRFP--
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 ITIDVMRINTTHLNNLLQKVPDAFSLYNYAIPSDFYGCIHAYYLNVTDT-YAIATQRR--
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 VTLDVMRINKTHYSNLIGNVPDLFTKYNYALPTNFYGCVHAYYINVTDGRYALATHYPAT
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 VTLDIFRANTTHLANMLGKVPDVFSKYNYALPPDFYGCVHSYYINDSSRMYAIAQQWPAT
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 VTLDVMRINKTHYSNLIGNVPDLFTKYNYALPTNFYGCVHAYYINVTDGRYALATHYPAT
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 VTLDIFRANTTHLANMLGKVPDVFSKYNYALPPDFYGCVHSYYINDTSPMYAIAQQWPAT
:*:*::* * ** *:: *** *: ****:* :****:*::*:* : * :*
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 -IKPGGRQSNSAFIDTVINAA-HYSPFSYV-YGLAVITLKPAAGSKLVCPVANDTVVITD
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 PITPGGRQPYSDYVRTVLNTP-NPSCTTLTCFGVVVISLKPASGRKLVCPSVNDTDMRTN
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VIQPGGRQTDSSLVGTWLNSPAKSHCTILSCFGVAVIGLQPASGTQLVCPKQNDTTLIED
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VITPGGRQPYNSYVATVLNTV-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQ
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 -IKPGGRQSNSAFIDTVINAA-HYSPFSYV-YGLAVITLKPAAGSKLVCPVANDTVVITD
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 -ISPGGRQDDSFYINTVLGAA-QYSGFNTLLYGLSVISLTPASGNKLVCPIANDTAVVTN
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 VITPGGRQPYNSYVATVLNTV-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQ
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 VIAPGGRQPYNSYVGTVLNTP-NPTCTQLTCFGVVVISLKPASGKHLVCPSANDTDLVTR
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 VITPGGRQPYNSYVATVLNTV-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQ
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 VIAPGGRQPYNSYVGTVLNTP-NPKCTQLTCFGVVVISLKPASGKHLVCPSANDTDLVTR
* ***** . : * :.: : :*: ** * **:* :**** *** :
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 RCVQYNLYGYTGTGVLSKNTSLVIPDGKVFTASSTGTIIGVSINSTTYSIMPCVTVPVSV
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ECVKYNLYGYTGTGVFN-VSTLTIPDSKLFVANGAGDIIAASVKGTVYSITPCVSVPVSV
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 QCVTYNVYGYTGTGVFT-TSNLTIPDNKLFSASATGAISAVSIHNAVYAISPCVSVPVSV
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 QCVKYNLYGYTGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSV
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 RCVQYNLYGYTGTGVLSKNTSLVIPDGKVFTASSTGTIIGVSINSTTYSIMPCVTVPVSV
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 QCVQYNLYGYTGTGVLNATTAISIPSDKVFSASDTGDIVAVRVNGTVYTIRPCVSVPISV
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 QCVKYNLYGYTGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSV
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 ECVKYNLYGYTGTGVFN-ESSLVIPDSKLFVASSTGDIIAAKVRGKVYSITPCVSVPISV
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 QCVKYNLYGYTGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSV
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 ECVKYNLYGYTGTGVFN-ESSLVIPDSKLFVASSTGDIIAAKVRGKVYSITPCVSVPISV
.** **:********:. : : **..*:* *. :* * .. . .* * .**:**:**
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GYHPNFERALLFNGLSCSQRSRAVTEPVSVLWSA-----SATAQDAFDTPSGCVVNVELR
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GYDPNFERALLFNGLACKERAVAVSMPASLFWRTVVQDNITNSVTTFDTLSGCVYNVYNA
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GFSPNFDKVLLFNGLACKERAVAVSIPASDYWMRV---RSSENDTIFDTESGCVYNAHNR
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTPSGCVYNVRNL
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GYHPNFERALLFNGLSCSQRSRAVTEPVSVLWSA-----SATAQDAFDTPSGCVVNVELR
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 GYHAGYERALLFNGLSCADRTSAITMPASTYWSTA---RAQSASNYYDTISGCVYNVDYN
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 GYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTPSGCVYNVRNL
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 GYDPSFERALLFNGLSCSERSVAVSLPASDYWLAAVADNASTGVVTFDTLSGCVHNVRNA
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 GYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTPSGCVYNVRNL
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 GYDPSFERALLFNGLSCSERSVAVSLPASDYWVAAVADNASTGVVTFDTLSGCVHNVRNA
*: ..:::.******:* :*: *:. *.* * :** **** *.
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 NTTIVNTCAMPIGNSLCFINGSIAT----ANADSLPRLQLVNYDPLYDNSTATPMTPVYW
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TNIVVQSCSMPLGNSLCLANLTTST---VSVSRAGNLLSLVTYDPTAIAG-VKVMTPVYW
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TDLVVNECSLPLGNSLCLINDTAST-----RREASNLLTLVSFQPGIIAS-VKVLTPVYW
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSLVTYDPTAANA-VQLLTPVYW
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 NTTIVNTCAMPIGNSLCFINGSIAT----ANADSLPRLQLVNYDPLYDNSTATPMTPVYW
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 NATTVNQCVMPLGNSLCLVPNTQRV--------AGSRLTLVNFDPMYVSDSVTSLTPIYW
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 TTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSLVTYDPTAANA-VQLLTPVYW
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 TDITVPTCLMPLGNSLCLANITQPSQYGLSTTSSVNLLSLVTYDPTFQGG-VKVMSPVYW
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 TTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSLVTYDPTAANA-VQLLTPVYW
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 TDITVPTCLMPLGNSLCLANITQPSQYGLSTTSSVNLLSLVTYDPTFQGG-VKVMSPVYW
. * * :*:*****: : : * **.::* . ::*:**
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VKVPTNFTLSATEEYIQTTAPKITIDCARYLCGDSSRCLNVLLHYGTFCNDINKALSRVS
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ISIPTNFTLGAVSEYIQTTSPKINVDCVKYLCGDSERCTTVLLQYGTFCNDVNKALSEVS
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VRVPTNFTLTATTEFIETTAPKITIDCARYLCGDSSRCLAVLEQYGTFCDDVNTALQRVN
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VSIPTNFTLAATSEYIQTSSPKINVDCAKYLCGDSDRCMNVLLQYGTFCDDVNKALAEVS
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VKVPTNFTLSATEEYIQTTAPKITIDCARYLCGDSSRCLNVLLHYGTFCNDINKALSRVS
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 VNIPTNFTLAATEEFIQTTAPKMNIDCARYLCGDSSRCLTVSLQYGTFCDDINKALLRVS
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 VSIPTNFTLAATSEYIQTSSPKINVDCAKYLCGDSDRCMNVLLQYGTFCDDVNKALAEVS
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 ISIPTNFTLGAITEYIQTTSPKVNVDCVKYLCGDSERCTTVLLQYGTFCDDVNKALSEVS
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 VSIPTNFTLAATSEYIQTSSPKINVDCAKYLCGDSDRCMNVLLQYGTFCDDVNKALAEVS
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 ISIPTNFTLGAITEYIQTTSPKVNVDCVKYLCGDSERCTTVLLQYGTFCDDVNKALSEVS
: :****** * *:*:*::**:.:**.:******.** * :*****:*:*.** .*.
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TILDSALLSLVKELSINTRDEVTTFSFDGDYNFTGLMGCLGPNCGAT-TYRSAFSDLLYD
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 AIIDASMVSLVSEITADVVRS-ENAHFDTTYNFTGLLGCVGSSCSST--YRSALSDLLYN
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TMLDAAVVSLTSQLVSDIVPT-ENSNFDSTYNFTALMGCLGSSCNSK---RSAISDLLYN
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ATIDASVVSLMSELTSDVVRN-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYN
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TILDSALLSLVKELSINTRDEVTTFSFDGDYNFTGLMGCLGPNCGAT-TYRSAFSDLLYD
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 QLLDTSLLALFKEFSTNVRPE-AELSLDGAYNFTGLMGCLGSNCGGK-SHRSALSELLYN
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 ATIDASVVSLMSELTSDVVRN-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYN
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 SIIDASMISLVSEITADVVRS-ENALFDTTYNFTGLLGCVGSNCNDRTTYRSALSDLLYN
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 ATIDASVVSLMSELTSDVVRN-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYN
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 SIIDASMISLVSEITADVVRS-ENALFDTTYNFTGLLGCVGSNCNDRTTYRSALSDLLYN
:*:::::* .:: : :* ****.*:**:*..*. ***:*:***:
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 KVRITDPGFMQSYQKCIDSQWGGSIRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAV
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 KVKVTDPGFMSSYQKCI-SQWGGDVRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAV
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 KVKIADPGFMDSYQKCIDSQWGGNIRDLICTQVFNGIAVLPPIVSPGMQALYTSLLVGAV
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 KVKVTDPGFMQSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAV
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 KVRITDPGFMQSYQKCIDSQWGGSIRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAV
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 KVKVADPGFMSSYQKCIDSQWGGEVRDLICTQTYNGISVLPPIVAPGMQALYTSLLVGAV
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 KVKVTDPGFMQSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAV
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 KVKVTDPGFMSSYQKCI-SQWGGDIRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAV
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 KVKVTDPGFMQSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAV
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 KVKVTDPGFMSSYQKCI-SQWGGDIRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAV
**:::*****.****** *****.:***:*** :***:******:*.*************
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNALVNIQKGFTET
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ASAGFTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKALVSIQQGFDAT
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ASSGYTFGITSVGVIPFATQLQFRLNGIGVTTQVLVDNQKLIASSFNNALNQIQKGFDAT
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNALTNIQKGFDAT
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNALVNIQKGFTET
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 ASSGYTFGITSVGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNKALTSIQEGFTAT
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 ASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNALTNIQKGFDAT
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 ASAGYTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKALVSIQQGFDAT
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 ASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNALTNIQKGFDAT
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 ASAGYTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKALVSIQQGFDAT
**:*:***:**.**:************:********:**:***.***:** .**:** *
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 SIALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIFSRLEGLAANAEVDRLINGRM
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 NEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIFSRLDGLEANAQVDRLINGRM
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 NSALSKIQAVINQHATQLQTLVLQLGNTFGAISSSINIIFSRLEGLEADAEVDRLISGRM
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 NEAISKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIFSRLDGLEADAQVDRLINGRT
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 SIALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIFSRLEGLAANAEVDRLINGRM
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 NQALAKMQAVINQHASQLQTLVIQLGNSFGAISSSLNEIFSRLEGLAADAEVDRLINGRM
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 NEALSKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIFSRLDGLEADAQVDRLINGRT
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 NEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIFSRLDGLEANAQVDRLINGRM
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 NEALSKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIFSRLDGLEADAQVDRLINGRT
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 NEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIFSRLDGLEANAQVDRLINGRM
. *::*:* ****** **:*** ****:*****:*:* *****:** *:*:*****.**
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MVLNTYVTQLLIQASEAKAQNALAAQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGVL
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VVLNTYVTQLLIKASEVRAQALLAKQKISECVKSQSLRNDFCGNGTHVFSVPQLAPNGIM
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VVLNTYVTQLLVQASRIKAQSDLALQKINECVKSQTLRNEFCGNGTHVLSVPQLAPNGIM
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 VVLNTYVTQLLIKATEVRSQALLAKQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGIL
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MVLNTYVTQLLIQASEAKAQNALAAQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGVL
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 VVLNTYVTQLLIQASELRAQNQLAVQKISECVKAQSSRNDFCGNGTHVLSIPQLAPNGVL
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 VVLNTYVTQLLIKATEVRSQALLAKQKISECVKAQSLRNDFCGNGIHVLSIPQLAPNGIL
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 VVLNTYVTQLLIKASEVKSQALLAKQKISECVKSQSLRNDFCGNGTHVFSVPQLAPNGIM
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 VVLNTYVTQLLIKATEVRSQALLAKQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGIL
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 VVLNTYVTQLLIKASEVKSQALLAKQKISECVKSQSLRNDFCGNGTHVFSVPQLAPNGIM
:**********::*:. ::* ** ***.****:*: **:***** **:*:*******::
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 FIHYAYTPTEYAFVQTSAGLCHNGTGYAPRQGMFVLPNNTNMWHFTTMQFYNPVNISASN
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 FLHYTYKPTAYAVVQTAAGLCFNNTGYAPVGGLFVLPNDSIYWHFTKLNFYNPVNLSNSN
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 FIHYSYTPTQYATVQTAAGLCFNGTGYAPRNGLFILPNNSNFWYFTQANFYNPVNISNSN
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 FLHYTYKPTAFAVVQTAAGLCYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVEN
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 FIHYAYTPTEYAFVQTSAGLCHNGTGYAPRQGMFVLPNNTNMWHFTTMQFYNPVNISASN
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 FIHYTYRPTEYAYVQTSAGLCYNKTGYAPKGGMFVLPNNTNLWHFTAMNFYNPVNITVFN
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 FLHYTYKPTAFAVVQTAAGLCYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVEN
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 FLHYTYKPTSYALVQTAAGLCLNNTGYAPRDGLFVLPNGSIYWQFTKMNFYNPVRLTNSN
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 FLHYTYKPTAFAVVQTAAGLCYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVEN
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 FLHYTYKPTSYALVQTAAGLCLNNTGYAPRDGLFVLPNGSIYWQFTKMNFYNPVRLTNSN
*:**:* ** :* ***:**** * ***** *:*:***.: * ** :***** :: *
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TQVLTSCSVNYTSVNYTVLEPSVPGDYDFQKEFDKFYKNLSTIFNNTFNPNDFNFSTVDV
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TQVLTTCSVNYTAVNYTVLDPVVNSDFNFTAEFDKWYKNHSSYFNNTFNPGDFNFSTVDI
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TQVLESCSVNYTTVNYTILSPQEPLYNNFDEEFNKFYKNLSSVFNNTFNPGAFNFSTVEL
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TQVLSTCGLNYSHVNYTVVNPSVPSDFDFEEEFNKWYKNHTSIFNNTFDPSAFNFSMVDV
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TQVLTSCSVNYTSVNYTVLEPSVPGDYDFQKEFDKFYKNLSTIFNNTFNPNDFNFSTVDV
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 TQILTSCSLNFTAVNYTVLEPLQYSDFDFDAQFEKFYKNISSHFNNTFDPNQFNFSTVDV
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 TQVLSTCGLNYSHVNYTVVNPSVPSDFDFEEEFNKWYKNHSSIFNNTFDPSAFNFSMVDV
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 TQVLTTCSVNYTTVNYTVLPPTDNMDFNFTAEFEKWYKNHSSQFNNTFNPGDFNFSTVDI
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 TQVLSTCGLNYSHVNYTVVNPSVPSDFDFEEEFNKWYKNHSSIFNNTFDPSAFNFSMVDV
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 TQVLTTCSVNYTTVNYTVLPPTDNMDFNFTAEFEKWYKNHSSQFNNTFNPGDFNFSTVDI
**:* :*.:*:: ****:: * :* :*:*:*** :: *****:*. **** *::
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TAQIKSLHDVVNQLNQSFIDLKKLNVYEKTIKWPWYVWLAMIAGIVGLVLAVIMLMCMTN
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ERELSTLTEVVRQLNESFIDLKKLNVYEQTIKWPWYVWLAMIAGLVGLALAVVMLLCMTN
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 QSEIATLNEVVQQLNKSFIDLKQMNVYEQTIKWPWYVWLAMIAGLVGLALAVVMLLCMTN
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 NKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLALAVVMLLCMTN
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 TAQIKSLHDVVNQLNQSFIDLKKLNVYEKTIKWPWYVWLAMIAGIVGLVLAVIMLMCMTN
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 KEQLDTLTNVVKQLNESVIDLKQMNVYEQTIKWPWYVWLAMIAGIVGLVLAVVMLLCMTN
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 NKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLALAVVMLLCMTN
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 QNELNTLNAVVKQLNESFIDLKKLNVYEQTIKWPWYIWLAMIAGLVGLALAVVMLLCMTN
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 NKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLALAVVMLLCMTN
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 QNELNTLNAVVKQLNESFIDLKKLNVYEQTIKWPWYIWLAMIAGLVGLALAVVMLLCMTN
:: :* **.***:* ****::****:*******:*******:***.***:**:****
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 CCSCFKGMCDCRRCCGSYDSYDDVYPAVRVNKKRTV
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 CCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 CCSCFKGMCSCRHC--YYDEIEDVYPAVRVHNKRTA
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 CCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 CCSCFKGMCDCRRCCGSYDSYDDVYPAVRVNKKRTV
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 CCSCFKGMCSCKQC--YYDELDDVYPAVRVHNKRTA
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 CCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 CCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 CCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 CCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
********* *: * **. :******** :***.
>BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGCTGTTGATATTGGTGTTAGGGGTGTCGCTTGCAGCGGCGTCTAGGCCTGAGTGCTTCAAT---CCGCGTTTTACACTAACACCTCTTAACCATACTTTAAATTACACGTCTATTAAGGCTAAAGTTTCAAATGTTTTGTTACCAGATCCATACATAGCGTACTCTGGTCAAACTTTGCGTCAGAATTTGTTTATGGCAGATATGTCTAATACCATTCTATACCCTGTAACGCCACCTGCGAATGGTGCTAATGGCGGGTTCATTTATAATACTTCTATTATTCCTGTTTCTGCAGGTCTATTTGTGAATACTTGGATGTATAGGCAACCTGCGTCTTCGCGTGCTTATTGTCAAGAGCCTTTTGGTGTAGCTTTTGGTGATACATTTGAAAATGACAGGATTGCTATTCTTATTATGGCCCCAGATAACTTAGGTTCTTGGAGTGCTGTGGCGCCTAGAAATCAAACTAATATTTATTTATTGGTTTGTAGTAATGCGACCCTATGCATAAACCCTGGTTTTAACAGGTGGGGTCCTGCTGGTAGCTTTATAGCACCCGATGCACTTGTTGACCATTCTAATTCATGTTTCGTCAACAACACCTTTTCGGTGAATATTAGTACTAGTCGTATTAGCCTAGCGTTCCTTTTTAAGGATGGTGACTTGCTTATCTACCATTCTGGTTGGTTACCTACGTCTAATTTTGAACATGGTTTCAGTAGGGGTAGTCATCCTATGACATATTTTATGTCGTTGCCTGTCGGCGGAAATTTACCTAGAGCTCAATTTTTCCAGTCTATAGTGCGTAGTAAT---------------GCCATAGATAAGGGTGATGGTATGTGTACTAATTTTGACGTAAATTTGCATGTTGCACATTTAATTAATAGGGACCTTTTAGTGTCTTATTTTAATAATGGTAGCGTTGCTAACGCTGCCGATTGTGCGGATAGTGCGGCTGAAGAGCTATATTGTGTTACAGGCTCGTTTGATCCGCCTACTGGTGTCTATCCTTTAAGTAGATATAGAGCCCAGGTGGCTGGGTTTGTACGCGTTACTCAGCGTGGTAGTTATTGCACACCACCATATAGCGTATTACAAGACCCGCCGCAACCTGTAGTATGGCGGCGTTATATGCTATATGATTGTGTGTTTGATTTTACTGTTGTTGTTGATAGTTTACCTACACATCAATTGCAATGTTATGGCGTGTCCCCTAGGCGTCTGGCATCCATGTGTTATGGTAGTGTAACGCTCGATGTTATGCGCATTAATGAGACGCATTTGAATAATTTGTTTAATCGCGTACCAGATACTTTTAGTTTATATAATTATGCTTTGCCTGACAACTTTTACGGTTGTTTGCATGCATTCTATTTGAATTCTACAGCTCCT---TATGCCGTAGCGAATAGGTTTCCT---------ATTAAACCTGGGGGCCGCCAGAGTAATAGTGCATTTATTGATACTGTTATTAATGCAGCC---CATTATAGCCCTTTTTCTTATGTT---TATGGTTTGGCAGTTATTACATTAAAACCGGCGGCTGGTAGTAAACTTGTTTGTCCTGTTGCTAATGATACTGTTGTTATTACGGATCGTTGTGTTCAGTACAATCTCTATGGTTACACTGGTACTGGCGTTTTGTCGAAAAACACTTCTTTAGTTATTCCAGATGGTAAAGTGTTTACTGCTTCTAGCACGGGCACTATTATAGGTGTGTCTATTAATAGTACCACTTATAGTATCATGCCTTGTGTTACAGTGCCTGTATCTGTAGGCTACCACCCTAATTTTGAAAGGGCATTGTTGTTTAACGGTCTATCTTGTTCACAGCGCTCCCGCGCCGTGACGGAGCCCGTATCTGTTTTATGGTCTGCT---------------AGTGCAACGGCTCAGGATGCATTTGACACACCATCTGGTTGCGTGGTTAATGTTGAACTACGTAATACTACTATAGTTAATACATGTGCTATGCCTATTGGTAATAGTTTGTGTTTTATTAATGGTTCTATTGCTACG------------GCTAATGCAGATAGTTTACCTCGACTGCAGTTAGTCAATTATGATCCATTGTATGACAACTCTACTGCGACTCCTATGACACCGGTTTATTGGGTTAAGGTCCCTACAAATTTTACTCTTTCTGCTACAGAGGAGTACATCCAGACTACTGCACCTAAGATTACTATTGATTGTGCACGTTACTTGTGCGGTGATTCCTCACGGTGCCTTAATGTGCTGTTACATTATGGTACTTTTTGTAATGACATTAATAAGGCACTATCTAGGGTTAGCACTATCCTAGACAGTGCCCTTTTATCCCTAGTTAAAGAGTTGTCTATTAATACTAGGGATGAAGTCACTACATTTTCTTTTGATGGGGACTATAATTTTACTGGCCTTATGGGTTGTTTAGGCCCTAATTGTGGTGCCACC---ACCTATAGGTCTGCTTTCTCTGATCTGTTATACGATAAAGTGCGTATTACAGATCCTGGGTTTATGCAGTCTTATCAGAAATGTATAGACTCTCAGTGGGGTGGCAGTATACGTGACCTTTTATGTACTCAGACGTACAACGGTATCGCTGTATTGCCGCCTATTGTATCACCAGCGATGCAAGCTCTTTATACGTCACTGCTTGTTGGTGCTGTGGCGTCCTCTGGTTATACATTTGGTATTACCTCTGCGGGTGTCATACCTTTTGCCACTCAGTTGCAGTTTAGGTTAAATGGCATTGGTGTTACTACACAAGTTCTTGTTGAAAATCAGAAGTTGATAGCTTCTTCGTTCAACAATGCTCTTGTTAATATCCAAAAGGGTTTTACTGAGACTAGTATAGCCCTTAGTAAGATGCAGGATGTTATTAATCAACATGCTGCGCAGTTGCACACCCTTGTGGTACAATTGGGTAATTCTTTTGGTGCAATTTCTTCTAGTATTAATGAAATTTTCAGCCGCTTAGAGGGTTTAGCCGCTAATGCTGAAGTTGACCGTCTTATTAATGGTCGTATGATGGTCCTTAATACTTATGTAACACAACTGTTAATTCAGGCTTCTGAAGCTAAGGCTCAAAATGCACTTGCAGCTCAGAAGATTAGTGAGTGCGTTAAGGCGCAGTCTTTACGTAACGATTTTTGTGGTAATGGTACTCACGTGCTAAGTATACCACAATTAGCGCCTAATGGTGTGTTGTTTATACATTATGCATACACTCCTACTGAGTATGCATTTGTACAGACCTCGGCGGGCCTCTGTCATAATGGCACGGGTTATGCCCCGCGTCAGGGTATGTTTGTGCTACCTAATAATACTAATATGTGGCACTTTACTACTATGCAGTTTTATAATCCTGTTAATATATCTGCTAGTAATACTCAAGTTCTTACTAGTTGTAGTGTTAATTATACTAGCGTAAATTACACAGTACTCGAACCTAGTGTACCGGGTGATTACGATTTTCAAAAAGAGTTTGACAAGTTTTATAAAAACTTGTCAACTATCTTTAATAATACTTTCAATCCTAATGATTTTAATTTTTCAACTGTTGATGTTACTGCTCAGATTAAATCGTTGCATGACGTTGTCAATCAGCTCAACCAGTCTTTTATTGACTTGAAGAAGCTTAATGTGTACGAGAAGACCATTAAATGGCCTTGGTATGTTTGGTTAGCAATGATAGCGGGTATAGTAGGTCTTGTACTCGCTGTTATTATGCTTATGTGCATGACCAATTGTTGTTCATGTTTTAAGGGCATGTGTGACTGCAGGCGTTGCTGCGGTTCTTATGATTCATATGATGATGTATATCCTGCTGTCCGTGTTAATAAGAAACGAACAGTA >BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ---ATGTTGGTGATATTGTTAATATTACCACTAGTCTCTGCT---AGACCTTCATGCGTTACT------ATAGAAAATTTGAGTTATGTTGCACATAACTTTACTCACGTTAGTTTTAGTATGAGTAAAGTGTCACGTATTTTTCCAGATCCATTTGTGGCGTATTCAGGTCAAACTTTGCGCCAATCATTATATATTGCTGACACGTCTAACACTACCGTCTATCCTATTACTCCACCACCTGTTGGAGGCAACCCTGGT---ATTTATAACTTAACAACATTACCTGTTAATGAGGGTTTCCTGGTCCATACTTTTATGTATAGAGACCAGCCAGTAGAC---ATGTATTGCCAAGAGCCCTTTGGCGTGGCATTTGGCACTACTTTTCAAAATGACCTTATTGCCATAGTTATGATAGTGCCTGGTCAATATGGATCGTGGGCTGAGGTAAAGAGGCAAAACACTACTAATGTTCATATATTAGTTTGTGGTAATGCAACTTTGTGTCAATACCCAGCTTTTAATCGCTGGGGACCAGCTGGTTCTATTTATAGTAGTGATGCTTTCACTACTTATGGTGAGTCGTGTTTTATTAATAACACGTTTAGTATAAACCTTAACACGTCTAGGTTAAATTTAGGGTTTAGGTTTAGTGATGGTAATCTTTATATTTACCATTCAAGTTGGTTGCCCATTTCAGGTTTAAACCTTATG---------TTAGACTACCCCCTCCATTATTATATGAGTGTTGGTGTAGGTTCTAATTTGCCCAATATGCAATTTTTCCAGTCGGTTTCCCGTAAGGGAACACCTCCCGCTCAGGGTGCTAATAATAATGATGGTAGTTGTTTGGCGTTTCAGAACAATCTTTATTTAGCCTATGTCACTCGTAGAGAACTGTTAGTTTCCTATGATGACAATGGGTTTCCCACCGCAGTAGCAGACTGTTCGTATGATGCAGGTGATGAGTTGTACTGTGTGACGGGGTCCTTTACACCACAGGTAGGTGTTTACCCGCTTAGTAGGTACAGAGCACAGGTTAGTGGCTATGTACAAATTACGCAGCAGGGTGATACTTGTGTATTACCGTATTCGGACATAGTTAGGCCACCACAACCTGTTGTGTGGCGTAGATACACTGTTACTAGCTGCTCATTTGATTTTGAAGCTATTGTTAATAGACTTCCTACTTTTGAGCTTAAATGCTTTGGCATATCTCCAGCTCGTTTGGCGCAGATGTGCTATTCTAGTGTAACTCTCGATTTGTTTCGTGCTAATACAACACATCTGGCTAATATGCTAGGTGGCGTTCCAGATCTGTTTAGTAAGTATAATTATGCATTACCTTCTAATTTTTATGGTTGTGTACATGCGTATTATATTAATGATACTAATAAAGATTATGCTATAGCTCAGCGCTGGCCGGCCACCCCAATAACTCCTGGCGGGCGCCAGCCATATAGTGATTATGTTAGGACTGTCTTGAACACTCCT---AACCCTAGTTGCACGACACTTACATGTTTTGGTGTTGTTGTTATATCACTTAAACCTGCATCTGGTAGGAAGTTAGTGTGTCCTAGCGTTAATGATACAGACATGCGCACCAATGAGTGCGTTAAGTATAACTTGTATGGTTATACGGGTACAGGGGTGTTTAAT---GTATCTACATTGACCATTCCTGATTCTAAGTTATTTGTTGCTAATGGTGCTGGTGACATTATAGCAGCGAGTGTTAAGGGTACAGTTTATAGTATAACTCCTTGTGTGTCTGTGCCCGTTTCTGTAGGGTATGACCCTAATTTTGAGCGCGCGCTATTATTTAACGGACTAGCATGTAAAGAGCGCGCAGTAGCCGTAAGTATGCCAGCATCATTATTCTGGCGGACTGTAGTGCAGGACAACATCACAAATAGCGTGACAACCTTTGACACGCTGTCTGGTTGTGTGTACAATGTGTACAATGCCACTAATATAGTGGTACAGTCTTGTTCTATGCCATTGGGCAACAGCCTATGTTTGGCTAATTTAACCACTAGTACG---------GTTTCTGTGAGTAGGGCCGGTAATTTGCTAAGTCTAGTGACTTATGACCCTACCGCCATAGCGGGT---GTTAAGGTTATGACACCCGTTTATTGGATTAGTATACCTACTAATTTTACGCTAGGTGCTGTGTCTGAATACATTCAAACGACATCTCCGAAGATTAATGTAGACTGTGTTAAATATTTGTGTGGCGATTCTGAGCGTTGTACTACTGTTTTGTTACAATATGGCACTTTTTGTAATGATGTTAATAAGGCGTTGTCAGAAGTTAGTGCTATTATAGATGCTAGTATGGTTTCTCTAGTGTCTGAAATTACGGCTGACGTTGTGCGTAGT---GAAAATGCTCATTTCGACACAACGTATAATTTTACTGGTCTCCTAGGCTGTGTAGGTTCCAGCTGTAGTAGTACT------TACAGGTCTGCACTTTCAGACCTATTATACAATAAAGTTAAGGTTACGGACCCCGGCTTTATGAGTTCTTATCAGAAATGTATT---TCGCAGTGGGGTGGTGACGTTAGAGATTTGTTTTGTACGCAAAACTTTAATGGCATCTCCGTATTACCTCCTATAGTGTCACCTGGTATGCAGGCGTTGTACACTTCGTTGTTAGTAGGGGCTGTAGCTTCGGCGGGTTTTACTTTTGGTGTCACATCTGTTGGTGTTATACCTTTTGCAACCCAGCTCCAGTTTAGATTGAATGGTTTAGGTGTTACTACTCAGGTTTTGGTGGAAAACCAGCAACTTATAGCTAACTCTTTTAATAAGGCTCTTGTTAGTATACAGCAGGGGTTCGATGCCACCAATGAGGCTCTTAGTAAGATGCAGTCTGTCATTAACCAGCATGCCCAGCAACTACAGACGCTAGTTTCACAGTTGGGTAATTCATTTGGCGCCATTTCTTCCTCTATTAATGAAATATTTAGTCGGTTAGATGGTTTGGAGGCTAATGCACAAGTCGATAGACTTATTAATGGCCGTATGGTTGTACTTAATACTTATGTTACGCAACTGCTCATTAAGGCTTCAGAGGTGCGGGCCCAAGCGCTGCTCGCTAAACAGAAGATTAGCGAGTGCGTTAAGTCGCAATCTCTTCGTAATGACTTTTGTGGTAATGGTACACATGTATTTTCTGTACCGCAGTTAGCTCCTAATGGTATTATGTTTTTACATTATACCTACAAACCCACAGCTTATGCTGTGGTGCAAACTGCTGCAGGCCTGTGTTTTAATAACACTGGGTATGCACCAGTTGGAGGTTTGTTTGTACTGCCTAACGACAGTATTTACTGGCATTTTACTAAGTTGAATTTTTATAATCCTGTCAACCTTAGTAATAGTAACACGCAGGTGCTTACGACCTGCAGTGTTAATTATACAGCCGTTAATTACACAGTTTTAGACCCCGTGGTCAATTCTGACTTTAATTTTACGGCTGAATTTGATAAGTGGTACAAAAATCACAGTTCCTACTTTAATAACACTTTCAACCCAGGAGATTTTAATTTCTCAACGGTTGATATTGAGCGAGAGCTGTCCACCTTAACGGAGGTGGTTAGACAGCTGAATGAGTCTTTTATCGATTTGAAGAAGTTAAACGTTTATGAACAGACTATTAAGTGGCCGTGGTATGTATGGCTTGCTATGATAGCTGGCTTAGTTGGTTTGGCTCTAGCCGTTGTTATGCTATTATGTATGACTAATTGTTGTTCATGCTTTAAAGGTATGTGTGCATGTAAACCTTGC------CATTATGACGAGGTCGAAGATGTTTATCCTGCAGTTCGTGTATATAATAAACGAACAGCA >BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGTTGCTGATAGCATTCATATTGCTACCAGTGGTAACAGCGTCTAGACCTTTTTGTTTAGGTCGGGACTTTGATGTCTCACGTGTTTTACCTCATAATATTAGCACCGGCTCATTTGTCGTTAACAAGTTATCTACACTTTTGCCTGATCCTTATATAGCATATTCTGGCCAGACAGTACGACAAACTTTGTTTGTTGCAAATGCTACGGACACTACTATTTACCCGATTACCCCTTATAAAGAAGGTGACCGTGCTTAT---TACTATAATACTTCTCTGTATTTAGTTAGTCAAGGATTCTTTGTACATAGTTATATGTTCAAGAATCAGATTGAAGGT---TTATATTGTCAGCAACCATTTGGTGTGGTTTTTGGCAATACTTTTGAGCAAGACCGCATTGCTATAGTTATTATAGCACCAGATGTGTACGGTCGTTGGATTACTGCTACTCCACGCTCATATACTAACGTTACTATCTTAGTTTGTAGTAATGCTACTATATGCGCTAATCCTGCTTTTAATAGATGGGGACCAGCAGGTGACTATCTAGCTAATAATGCCTTTACTGAGCATGATGATTCTTGCTTTATAAATAACACTATGCGTATACCATATAATACATCACGTATTAATTTGGCATTTCGGTTCCAAGATGGTAACCTACTAATTTATTACTCAGATTGGTTACCACATGGTAGCTTAGATTTAAGT---------GCGCCTTGGCCTCTTAATTTTTACACGTCTGTGGCAGTTGGTGGCAATTTGAAGTATGCTCAATTTTTCCAGTCAGTAGTGCGTAATTATAATACGCCTACACAATCACTTACG------GACGGCAATTGTGTTGGTGATTTGGTTAATTTGTATGTAGCCCCTCTAGTGAAGCGTGAATTGCTCGTACAATATTCATTGGCGGGCAGGCCTATTAATGTAGCTGATTGTGCATTAGACTCAGGTGAAGAACTTTATTGTGTCACTGGCACATTTACTCCTGATGCGGGTGTTTACTCTTTGAGTAGATACCGTGCACAGACTGTAGGGCATGTTAGCATCACTCAACAATTTGAGACATGTGACATACCCTATGCAGCTTTGCAGACTCCACCTCAACCCATTGCATGGCGTAGGTACGCTGTCAGTAAGTGTGGGTTTGATTTTGAAGCAGTAATTAATAGACTGCCAACTTTTGAGCTAAAGTGTTTTGGTGTTTCACCTGCACGTTTGGCCTCTATGTGCTATGGTAAGGTTACTATAGATGTTTTTCGCATAAATGTGACTCACCTGGCAAACCTAATAGCTGGTGTGCCTGATGCATTTTCTAAATATAATTATGCTCTGCCAAGAGACTTCTATGGTTGTGTGCATGCTTTTTACGTTAATATGTCTAGTGAC---TATATTATCGCTGATAGCTGGCCGGCCGTTGTTATTCAACCAGGTGGCCGACAAACTGATTCTTCACTTGTAGGGACCTGGCTTAATTCACCGGCCAAGTCCCATTGCACCATTCTTAGCTGCTTCGGTGTAGCTGTTATAGGTTTACAGCCTGCTTCGGGCACACAACTTGTTTGCCCGAAACAAAATGACACAACGCTTATAGAGGACCAGTGTGTCACTTATAATGTGTATGGCTATACTGGTACTGGTGTTTTCACC---ACTTCCAATTTGACCATTCCGGATAACAAGCTATTTTCAGCTAGTGCTACCGGTGCTATATCTGCTGTTAGTATACATAATGCTGTTTATGCTATCAGCCCATGTGTTTCGGTACCTGTCTCTGTAGGGTTTAGTCCTAACTTCGACAAGGTGCTACTTTTTAATGGTCTGGCATGCAAGGAACGTGCTGTTGCTGTGTCCATACCTGCTTCTGACTATTGGATGCGTGTA---------CGTTCATCTGAGAATGACACAATATTTGATACGGAATCTGGTTGTGTGTATAATGCACACAATCGTACCGATTTGGTTGTTAATGAGTGCAGTTTGCCATTAGGTAATAGCCTGTGTCTTATTAATGACACTGCGTCTACT---------------AGACGAGAGGCTTCTAATTTATTAACACTAGTTAGTTTTCAACCAGGTATCATAGCTAGT---GTTAAGGTCCTTACACCTGTTTACTGGGTCCGTGTACCCACTAACTTTACTCTAACTGCTACTACCGAGTTCATTGAGACGACGGCCCCTAAAATCACAATTGATTGTGCTCGTTACTTGTGTGGTGACTCTAGTCGCTGTTTGGCAGTTCTAGAGCAATATGGTACATTTTGTGATGATGTCAACACAGCTCTGCAGCGTGTCAATACTATGTTGGACGCTGCTGTTGTGTCGCTTACCTCTCAGTTGGTTTCAGACATTGTGCCAACT---GAGAATAGTAATTTTGATTCAACTTACAACTTTACAGCACTTATGGGCTGTTTAGGTTCGAGTTGTAATTCTAAG---------CGTTCTGCTATTTCTGACCTATTATATAATAAGGTTAAAATAGCAGACCCCGGTTTTATGGACTCTTACCAAAAGTGTATTGATTCACAGTGGGGTGGCAATATCAGAGATCTCATTTGCACGCAAGTGTTTAATGGCATAGCTGTTTTACCACCTATCGTTTCACCAGGAATGCAAGCACTCTACACCTCTCTCCTGGTGGGTGCTGTTGCTTCTTCTGGTTATACCTTTGGTATAACATCAGTGGGCGTCATACCATTTGCCACTCAGTTGCAGTTTAGGCTGAATGGTATAGGCGTAACTACGCAGGTGTTGGTGGATAATCAGAAGCTTATTGCTTCGTCTTTTAATAATGCCCTAAATCAAATACAGAAGGGTTTTGATGCCACCAACTCGGCACTTTCTAAGATTCAAGCTGTCATAAATCAACATGCCACACAGCTGCAAACTTTGGTTTTGCAGTTAGGCAATACTTTTGGGGCTATTTCATCATCTATTAACATTATTTTCAGTCGTCTGGAAGGTTTGGAAGCTGATGCAGAAGTCGACAGACTTATTAGTGGCCGCATGGTTGTGCTTAATACTTACGTAACTCAGTTACTAGTACAAGCATCACGTATTAAAGCTCAAAGCGATCTGGCTTTGCAGAAAATTAATGAGTGCGTTAAGAGTCAGACTCTTCGCAATGAATTCTGTGGTAATGGAACACATGTCCTTAGTGTACCACAATTGGCGCCTAATGGTATCATGTTTATCCATTACTCTTATACTCCTACACAGTATGCCACTGTGCAGACGGCTGCGGGTCTGTGCTTTAATGGTACAGGTTATGCACCTAGAAATGGCTTATTTATTTTACCTAATAACTCTAATTTTTGGTACTTTACACAAGCCAATTTTTATAATCCTGTTAATATTAGCAATTCTAATACTCAGGTTTTAGAGTCGTGTAGTGTTAATTATACTACTGTTAATTACACTATTTTATCTCCACAGGAACCTCTCTACAATAACTTTGACGAGGAGTTTAATAAGTTCTATAAGAACCTTTCTAGTGTTTTTAATAACACTTTTAATCCAGGTGCTTTCAACTTCAGTACTGTTGAATTGCAATCAGAAATTGCGACACTAAATGAAGTGGTTCAACAGCTTAACAAGTCCTTCATTGATCTGAAACAAATGAATGTTTATGAACAAACCATTAAATGGCCTTGGTATGTTTGGCTCGCTATGATAGCGGGACTTGTAGGTTTAGCACTTGCAGTTGTTATGCTTTTATGTATGACAAATTGCTGCTCTTGCTTTAAAGGCATGTGTTCCTGTAGACACTGT------TATTATGACGAAATAGAAGATGTTTATCCTGCTGTACGTGTACATAATAAACGAACAGCA >BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ---ATGTTGGTGATATTGCTAATATTGCCTTTAGTACATGCT---AGACCCAGTTGTCTCACT------GTGTCACCTTTACAGTATTTAGAACATAATATTTCTTATGTTTCCTTGTCTGTTAGTAAAGTGACACGTTTAGTGCCGGATCCTTATGTAGCGTATTCCGGGCAGACTATACGTCAAAGTTTGTATTATGCGGACACTTCTAATGTTACTGTGTATCCCGTAACGCCGTATGCGGCGCCTGACAAGACGAGC---ATATATAATACCTCCTTTGTGATGGTAAATGACGGTTTGTTTGTGCATACGTATATGTATTTGAATCAACCGTCTAAT---ATGTACTGTCAAGACCCGTTTGGTGTGGCCTTTGGGACCACATTTGAACAGGATCATATAGCTATTGTGGTGATAGCACCTGACAATAGAGGTAGCTGGACGGCTGCGTCAAAGCGGAATGTAACTACAGTTCATATATTAGTCTGTAGTAACGCAACCCTTTGTGCGTACCCTGCATTTAATCGTTGGGGTCCTGCGAGTAGCATATACGCAAGTGATGCTTTTGTAGACCATGGTAATTCCTGTTTTGTAAACAACAGTTTTGATATACCTATTAATACGTCTCGTATTAATTTGGCTTTTAGGTTCTTGGATGGTAACCTATTGCTGTACCATTCTAGGTGGCTTCCAGGTTCTGGGCTTAATTTAGCC---------ACAGATTACCCCCTACACTTCTTTATGAGTGTGGGTGTTGGCGCTAATTTGCCTAATGCACAGTTTTTCCAATCCGTAGTCCGCTATAAC------------CGGGGTGTTGAT------GAAGCGCGATGTCATACTTTTCAGAATAATTTGTATATAGCACCTTTGAGTTTACGTGAAGTTTTAGTGTCTTACAGTGATAGTGGCTTGCCACTTAAGGTGGCTGATTGTGCGGCCGATGCAGGTGATGAGCTATTTTGTGTTACTGGCTCATTTGAACCTGCCATTGGTGTGTACCCTCTTAGTAGGTACCGTGCTCAGGTTAGTGATTATGTGCACATTACACAGCAATCACAGGCCTGCAAACTGCCTTACGCTGACATTGTATCACCACCTCAGCCTATTGTCTGGCGTCGATATACAGTGTCTAGTTGCTCATTTGACTTTGAGAGCATAGTTAATAATTTACCTACCTATGATCTCAAGTGCTATGGTGTATCACCCGCGCGGCTTGCACAAATGTGCTATGCGGGTGTTACTCTGGACGTTATGCGCATAAACAAGACGCATTATAGCAATTTAATTGGTAATGTGCCTGATTTATTTACAAAGTATAATTATGCCCTGCCCACCAATTTTTATGGTTGTGTTCACGCATATTATATTAATGTTACTGATGGCCGCTATGCTTTAGCGACTCATTACCCGGCCACTGTCATTACACCAGGAGGTAGACAGCCTTATAATAGCTATGTGGCTACTGTTTTGAATACAGTT---AATAACTGGTGTACCAGAGCTAATTGTTTTGGTCTTGTAGTTATAGGATTGAAGCCTGCATCAGGTAGGCAGTTAGTCTGCCCTAAGGCTAATGATACTGAAGTTATAGTGCAGCAATGTGTTAAGTATAATTTGTACGGTTACACAGGTACCGGCGTTTTAAGC---CCGTCTAATTTAACCATACCAGATGGTAAGTTGTTTGTGGCTAATAACGCAGGTAATATTGTTGCTGTTAATGCTTCTGGCACCGTATATGGCATTTCATCTTGCGTGTCAGTTCCTGTCTCAGTAGGATATAACCCCTCATTTGAGCAGGCGCTACTATTTAATGGTTTAGCGTGTTCAGAGAGAGCAGTTGCTGTTAATATGCCGGCGTCAACTTATTGGCTATCGGTGTCTAGAAACGCAGCCCCACCTGATGGTGGTGTGTTTGACACACCTTCTGGTTGTGTTTATAATGTACGCAATTTAACTACCATGGTAGTTAATTCGTGTGATATGCCTATTGGCAACAGCCTTTGTTTAACTAATGTAACTTATGCTAAT------------AGGGCTACAGATAGTTTACCTAGGTTGAGTTTAGTCACTTATGATCCAACGGCTGCTAATGCT---GTCCAGTTGCTCACACCAGTTTACTGGGTTAGTATACCCACTAATTTTACTCTGGCTGCTACTTCTGAGTATATACAAACTAGCTCACCAAAGATCAATGTAGATTGCGCGAAGTATTTATGTGGCGACTCTGATAGGTGTATGAATGTGTTGCTGCAGTATGGCACATTTTGTGATGACGTTAATAAGGCGCTGGCCGAGGTCAGTGCTACAATTGACGCATCCGTTGTGTCATTGATGTCAGAACTCACATCGGACGTTGTACGTAAT---GAAAACATGCAGTTTGACACTACATACAACTTTACCTCACTTATGGGTTGTTTGGGATCAGATTGTGATTCTAAA---ATGTACAGGTCCGCTTTATCGGACTTGTTGTATAATAAGGTCAAGGTCACGGACCCTGGCTTTATGCAGTCCTATCAGAAGTGCATT---TCTCAGTGGGGTGGTGAAATTAGAGACCTTATGTGTACTCAAACCTTTAATGGTATTGCTGTTTTACCACCTATTGTTTCTCCAGGCATGCAAGCCTTGTACACATCATTACTTGTGGGTGCGGTAGCATCTGCAGGTTATACATTTGGCATTACTTCTGTCGGGGTTGTGCCTTTTGCGACGCAATTGCAATTTAGATTAAATGGCATAGGCGTCACTACGCAGGTGCTTGTAGAGAATCAGAAACTTATTGCTAATTCTTTTAACAATGCCCTTACTAATATACAGAAGGGTTTTGATGCCACTAATGAGGCGATTAGTAAGATGCAGCTTGTTATTAACCAGCATGCTCAGCAATTGCAGACTTTGGTGAACCAGTTAGGTAATTCATTTGGTGCTATATCTGCTTCTATTAATGAAATATTTAGTCGTTTAGATGGTTTAGAGGCTGATGCTCAAGTGGATAGGCTTATTAATGGACGCACTGTTGTGCTTAATACTTATGTAACTCAGTTGCTTATTAAAGCTACAGAAGTGCGTAGTCAGGCCCTGTTAGCTAAGCAGAAAATTAGTGAGTGCGTTAAAGCACAATCTCTTCGTAATGATTTCTGTGGCAATGGCACACATGTTTTGTCTATACCACAGTTAGCTCCTAATGGTATTTTGTTTTTGCATTATACCTATAAACCGACGGCTTTTGCTGTTGTGCAAACTGCTGCTGGTCTGTGTTATAATGGCACAGGGTATGCACCTGTAGGTGGCATGTTTGTGTTACCTAATGGTACGCAGGCCTGGCACTTTACTAAAATGAATTTTTATAATCCTGTTAGTATTACAGTTGAGAACACGCAGGTTTTATCTACATGTGGCTTGAATTATTCACATGTTAACTACACTGTGGTGAACCCGTCGGTACCTAGTGATTTTGATTTTGAGGAAGAGTTTAATAAGTGGTATAAAAACCATACCTCTATATTTAATAATACATTCGACCCTAGTGCTTTTAATTTTTCTATGGTCGATGTAAATAAGCAACTGGCTACTCTTACAGATGTTGTTCAGCAGCTAAACAAGTCGTATATTGATTTGAAGCAATTAAATGTTTATGAACAGACCATTAAATGGCCGTGGTATATATGGCTCGCTATGATAGCGGGCCTTGTTGGCTTAGCCCTTGCAGTGGTCATGCTTTTATGTATGACTAACTGTTGTTCATGCTTCAAAGGCATGTGTTCATGCAAGCAGTGC------CATTATGATGAGGTAGATGATGTATATCCTGCTGTTCGTGTATATAATAAACGAACAGCA >HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGCTGTTGATATTGGTGTTAGGGGTGTCGCTTGCAGCGGCGTCTAGGCCTGAGTGCTTCAAT---CCGCGTTTTACACTAACACCTCTTAACCATACTTTAAATTACACGTCTATTAAGGCTAAAGTTTCAAATGTTTTGTTACCAGATCCATACATAGCGTACTCTGGTCAAACTTTGCGTCAGAATTTGTTTATGGCAGATATGTCTAATACCATTCTATACCCTGTAACGCCACCTGCGAATGGTGCTAATGGCGGGTTCATTTATAATACTTCTATTATTCCTGTTTCTGCAGGTCTATTTGTGAATACTTGGATGTATAGGCAACCTGCGTCTTCGCGTGCTTATTGTCAAGAGCCTTTTGGTGTAGCTTTTGGTGATACATTTGAAAATGACAGGATTGCTATTCTTATTATGGCCCCAGATAACTTAGGTTCTTGGAGTGCTGTGGCGCCTAGAAATCAAACTAATATTTATTTATTGGTTTGTAGTAATGCGACCCTATGCATAAACCCTGGTTTTAACAGGTGGGGTCCTGCTGGTAGCTTTATAGCACCCGATGCACTTGTTGACCATTCTAATTCATGTTTCGTCAACAACACCTTTTCGGTGAATATTAGTACTAGTCGTATTAGCCTAGCGTTCCTTTTTAAGGATGGTGACTTGCTTATCTACCATTCTGGTTGGTTACCTACGTCTAATTTTGAACATGGTTTCAGTAGGGGTAGTCATCCTATGACATATTTTATGTCGTTGCCTGTCGGCGGAAATTTACCTAGAGCTCAATTTTTCCAGTCTATAGTGCGTAGTAAT---------------GCCATAGATAAGGGTGATGGTATGTGTACTAATTTTGACGTAAATTTGCATGTTGCACATTTAATTAATAGGGACCTTTTAGTGTCTTATTTTAATAATGGTAGCGTTGCTAACGCTGCCGATTGTGCGGATAGTGCGGCTGAAGAGCTATATTGTGTTACAGGCTCGTTTGATCCGCCTACTGGTGTCTATCCTTTAAGTAGATATAGAGCCCAGGTGGCTGGGTTTGTACGCGTTACTCAGCGTGGTAGTTATTGCACACCACCATATAGCGTATTACAAGACCCGCCGCAACCTGTAGTATGGCGGCGTTATATGCTATATGATTGTGTGTTTGATTTTACTGTTGTTGTTGATAGTTTACCTACACATCAATTGCAATGTTATGGCGTGTCCCCTAGGCGTCTGGCATCCATGTGTTATGGTAGTGTAACGCTCGATGTTATGCGCATTAATGAGACGCATTTGAATAATTTGTTTAATCGCGTACCAGATACTTTTAGTTTATATAATTATGCTTTGCCTGACAACTTTTACGGTTGTTTGCATGCATTCTATTTGAATTCTACAGCTCCT---TATGCCGTAGCGAATAGGTTTCCT---------ATTAAACCTGGGGGCCGCCAGAGTAATAGTGCATTTATTGATACTGTTATTAATGCAGCC---CATTATAGCCCTTTTTCTTATGTT---TATGGTTTGGCAGTTATTACATTAAAACCGGCGGCTGGTAGTAAACTTGTTTGTCCTGTTGCTAATGATACTGTTGTTATTACGGATCGTTGTGTTCAGTACAATCTCTATGGTTACACTGGTACTGGCGTTTTGTCGAAAAACACTTCTTTAGTTATTCCAGATGGTAAAGTGTTTACTGCTTCTAGCACGGGCACTATTATAGGTGTGTCTATTAATAGTACCACTTATAGTATCATGCCTTGTGTTACAGTGCCTGTATCTGTAGGCTACCACCCTAATTTTGAAAGGGCATTGTTGTTTAACGGTCTATCTTGTTCACAGCGCTCCCGCGCCGTGACGGAGCCCGTATCTGTTTTATGGTCTGCT---------------AGTGCAACGGCTCAGGATGCATTTGACACACCATCTGGTTGCGTGGTTAATGTTGAACTACGTAATACTACTATAGTTAATACATGTGCTATGCCTATTGGTAATAGTTTGTGTTTTATTAATGGTTCTATTGCTACG------------GCTAATGCAGATAGTTTACCTCGACTGCAGTTAGTCAATTATGATCCATTGTATGACAACTCTACTGCGACTCCTATGACACCGGTTTATTGGGTTAAGGTCCCTACAAATTTTACTCTTTCTGCTACAGAGGAGTACATCCAGACTACTGCACCTAAGATTACTATTGATTGTGCACGTTACTTGTGCGGTGATTCCTCACGGTGCCTTAATGTGCTGTTACATTATGGTACTTTTTGTAATGACATTAATAAGGCACTATCTAGGGTTAGCACTATCCTAGACAGTGCCCTTTTATCCCTAGTTAAAGAGTTGTCTATTAATACTAGGGATGAAGTCACTACATTTTCTTTTGATGGGGACTATAATTTTACTGGCCTTATGGGTTGTTTAGGCCCTAATTGTGGTGCCACC---ACCTATAGGTCTGCTTTCTCTGATCTGTTATACGATAAAGTGCGTATTACAGATCCTGGGTTTATGCAGTCTTATCAGAAATGTATAGACTCTCAGTGGGGTGGCAGTATACGTGACCTTTTATGTACTCAGACGTACAACGGTATCGCTGTATTGCCGCCTATTGTATCACCAGCGATGCAAGCTCTTTATACGTCACTGCTTGTTGGTGCTGTGGCGTCCTCTGGTTATACATTTGGTATTACCTCTGCGGGTGTCATACCTTTTGCCACTCAGTTGCAGTTTAGGTTAAATGGCATTGGTGTTACTACACAAGTTCTTGTTGAAAATCAGAAGTTGATAGCTTCTTCGTTCAACAATGCTCTTGTTAATATCCAAAAGGGTTTTACTGAGACTAGTATAGCCCTTAGTAAGATGCAGGATGTTATTAATCAACATGCTGCGCAGTTGCACACCCTTGTGGTACAATTGGGTAATTCTTTTGGTGCAATTTCTTCTAGTATTAATGAAATTTTCAGCCGCTTAGAGGGTTTAGCCGCTAATGCTGAAGTTGACCGTCTTATTAATGGTCGTATGATGGTCCTTAATACTTATGTAACACAACTGTTAATTCAGGCTTCTGAAGCTAAGGCTCAAAATGCACTTGCAGCTCAGAAGATTAGTGAGTGCGTTAAGGCGCAGTCTTTACGTAACGATTTTTGTGGTAATGGTACTCACGTGCTAAGTATACCACAATTAGCGCCTAATGGTGTGTTGTTTATACATTATGCATACACTCCTACTGAGTATGCATTTGTACAGACCTCGGCGGGCCTCTGTCATAATGGCACGGGTTATGCCCCGCGTCAGGGTATGTTTGTGCTACCTAATAATACTAATATGTGGCACTTTACTACTATGCAGTTTTATAATCCTGTTAATATATCTGCTAGTAATACTCAAGTTCTTACTAGTTGTAGTGTTAATTATACTAGCGTAAATTACACAGTACTCGAACCTAGTGTACCGGGTGATTACGATTTTCAAAAAGAGTTTGACAAGTTTTATAAAAACTTGTCAACTATCTTTAATAATACTTTCAATCCTAATGATTTTAATTTTTCAACTGTTGATGTTACTGCTCAGATTAAATCGTTGCATGACGTTGTCAATCAGCTCAACCAGTCTTTTATTGACTTGAAGAAGCTTAATGTGTACGAGAAGACCATTAAATGGCCTTGGTATGTTTGGTTAGCAATGATAGCGGGTATAGTAGGTCTTGTACTCGCTGTTATTATGCTTATGTGCATGACCAATTGTTGTTCATGTTTTAAGGGCATGTGTGACTGCAGGCGTTGCTGCGGTTCTTATGATTCATATGATGATGTATATCCTGCTGTCCGTGTTAATAAGAAACGAACAGTA >Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 ---ATGTTTCTGATATTTCTGCTGCTGTCGCAGGTAAATGCTGATAGGCCTTCCTGTTTCAGT---AGCCCAGATCTCACAACTACCAAACAACACATTATTAGTAATGTGTCTTTCTATGTGCAAGTCAAGAATCTTTTACTACCGGATCCGTACATAGCTTACTCCGGCCAAGTTTTAAAGCAACATTTGCCTACTGCTGACCTGAGTAATGTTATTAAATACCCTATCACCCCAGATTTGGTGGATGCTACTAAAGGTTATGTGTTTAACACAACCATTTTGCCTGTAGACTTGGGTGTGTTTGTTCACACGTGGATGTATAGGCAACCTAGTTCTTCTAATCTGTATTGTCAGCAACCATTCGGTGTGGCTTTTGGCAATACTTTTGTAGAGGATAGGATAGCTGTTATAGTTATTGCCCCTGATAATTTAGGTTCATGGGTGCATAGCAGCCCACGTGACCAAACTACGGTGCACATACTTGTTTGCAGTAATGCTACGCTATGTGCAAATCCCGGGTTTAACCGGTGGGGTCCTGCGGGTAATATACTTGTTAGGAACCCGTTAGTTGAACATGATAATTCATGTTTTGTAAATAATTCTTTTAACATACCATTAAGTACAGCTCGGTTGAACCTTGCTTTCTTGTTTAAGGATGGTAATTTATTGGTGTACCATTCACCGTGGTTGCCTCATGGCGATTTTAATGTTAAT---------GGTACTTACCCTCTCACTTATTTTATGACTTTACCTGTAGGTAGTAATTTAAGACATGCACAGTATTTTCAATCCGTTGTGCGTAATGAT------------TACGCAGTTGCG------GATGGCAAGTGTAGGGACTTTGATCTAAATCTATATATAGCACCAATTGTCTATAAAGAGTTGTTGGTCCAGTATTCAATTAATGGTTCTGTTGAGAATGCTGCTGAGTGTGCCAACAGTGCTTCTGATGAATTGTACTGTGTTACAGGCACTTTTGAACCTCAGACTGGTGTTTATGCTTTAAGCCGCTACCGCGCGCAAGTCCAAGGGTTTGTGCGTATTACGCAGCAGGCTGACGTCTGTCAACCACCTTATGCTGCCCTAGAAAACCCCCCACAACCAGTGGTTTGGCGTCGTTATTTAGTGCGTGACTGCGCATTTGATTTTGCGACTGTTATTAATAATTTGCCTACATACCAGTTGCATTGTTATGGTGTGTCACCTAGTAGGTTGGCCTCTATGTGTTACAACACCATTACTATAGATGTTATGCGTATTAACACTACACATCTGAATAATTTGCTTCAGAAGGTGCCTGATGCGTTTAGCCTTTATAATTATGCTATACCATCAGACTTTTATGGTTGTATACATGCATACTATCTTAATGTTACGGATACG---TATGCTATAGCGACTCAGAGGCGT---------ATATCACCTGGTGGCCGTCAGGATGACTCTTTTTATATTAATACTGTTTTGGGTGCTGCT---CAATATAGCGGTTTTAATACGCTATTGTATGGTCTGTCTGTTATATCTCTTACACCCGCATCTGGTAATAAGCTAGTTTGCCCTATAGCGAACGATACAGCTGTTGTCACAAACCAATGCGTGCAATATAACCTTTATGGTTACACTGGCACTGGTGTTTTAAATGCCACCACGGCTATAAGTATACCTAGTGATAAGGTGTTTTCTGCATCTGACACTGGTGATATTGTGGCTGTGCGTGTTAATGGCACTGTTTATACTATTAGACCTTGCGTATCTGTGCCTATATCTGTAGGTTACCATGCAGGTTATGAACGTGCTCTTTTATTTAATGGTCTTAGTTGTGCAGACCGGACATCTGCTATAACCATGCCGGCATCCACTTACTGGTCTACTGCT---------AGAGCTCAGTCTGCTTCCAATTATTATGACACAATTTCTGGTTGTGTCTATAATGTTGATTACAATAATGCTACCACTGTTAACCAGTGTGTTATGCCATTGGGTAATAGTCTCTGCCTCGTGCCAAACACACAGCGCGTA------------------------GCGGGTAGTAGACTAACGTTGGTTAATTTTGACCCTATGTATGTAAGTGATTCAGTTACATCACTTACACCCATTTATTGGGTTAATATACCCACTAATTTTACCTTAGCTGCTACGGAAGAGTTTATACAGACCACTGCACCTAAAATGAACATTGATTGTGCTCGCTACTTATGCGGCGATTCTTCTCGTTGCCTAACTGTGTCACTACAATATGGTACCTTCTGTGATGACATTAATAAAGCTTTGTTACGTGTTAGTCAATTGTTGGACACGTCACTGTTAGCTCTTTTTAAAGAGTTTTCAACTAATGTCAGACCTGAG---GCTGAACTTAGTTTGGATGGAGCCTATAACTTTACAGGTCTTATGGGTTGTTTAGGCAGTAACTGTGGTGGGAAA---TCGCACAGGTCTGCCCTTTCTGAGTTACTTTACAATAAGGTTAAAGTCGCAGATCCAGGCTTTATGTCTTCATATCAGAAGTGCATAGACTCTCAGTGGGGTGGTGAAGTCAGGGATCTAATTTGTACACAAACGTACAATGGTATCTCGGTTTTGCCGCCTATTGTTGCACCTGGCATGCAGGCTTTATATACGTCGCTGCTTGTGGGTGCTGTTGCCTCTTCTGGCTATACTTTTGGTATTACATCTGTAGGTGTCATACCTTTCGCTACTCAGTTGCAGTTCCGCCTTAATGGTATAGGTGTTACTACACAGGTTTTAGTTGAGAATCAGAAATTGATTGCATCATCTTTTAATAAAGCTTTAACATCCATACAGGAGGGCTTCACAGCTACAAATCAGGCTTTAGCCAAGATGCAAGCTGTGATTAACCAGCATGCGTCGCAATTGCAAACGTTGGTTATACAGTTAGGTAATTCTTTTGGTGCTATTTCCTCCTCTTTGAACGAAATTTTTAGCCGTTTGGAGGGTCTTGCAGCTGATGCTGAAGTGGATCGTCTTATTAATGGTAGAATGGTTGTGTTAAACACTTATGTAACACAACTGTTAATTCAGGCCTCTGAGCTGCGTGCACAAAATCAGTTAGCTGTTCAGAAGATTAGTGAGTGTGTTAAGGCACAATCGTCTAGAAATGACTTTTGTGGCAATGGCACTCATGTATTAAGTATACCACAACTTGCTCCTAATGGTGTACTTTTTATCCATTATACCTATAGACCGACAGAATATGCTTATGTTCAGACTTCCGCTGGTCTTTGTTATAACAAAACCGGATATGCCCCTAAGGGTGGTATGTTCGTTTTACCTAATAATACTAATTTATGGCATTTTACAGCTATGAATTTTTACAATCCTGTCAATATTACAGTGTTTAACACTCAAATTCTGACGTCATGTAGTTTGAACTTTACTGCTGTGAACTACACTGTGCTGGAACCACTGCAGTATAGTGATTTTGATTTTGATGCTCAGTTTGAGAAGTTTTATAAAAATATTTCTTCTCATTTTAATAATACATTCGATCCAAACCAGTTTAACTTTTCCACCGTTGATGTCAAGGAACAGTTAGACACTCTCACTAATGTTGTTAAGCAGCTGAATGAATCAGTTATAGACCTGAAACAAATGAATGTTTATGAGCAGACTATTAAATGGCCTTGGTATGTGTGGCTTGCTATGATAGCGGGTATAGTTGGGCTAGTTCTAGCAGTTGTCATGCTATTGTGCATGACAAACTGTTGCTCTTGTTTTAAAGGCATGTGTTCATGTAAACAATGT------TATTATGATGAACTTGATGATGTGTATCCTGCTGTTCGTGTACATAATAAACGAACAGCA >UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 ---ATGTTGGTGATATTGCTAATATTGCCTTTAGTACATGCT---AGACCCAGTTGTCTCACT------GTGTCACCTTTACAGTATTTAGAACATAATATTTCTTATGTTTCCTTGTCTGTTAGTAAAGTGACACGTTTAGTGCCGGATCCTTATGTAGCGTATTCCGGGCAGACTATACGTCAAAGTTTGTATTATGCGGACACTTCTAATGTTACTGTGTATCCCGTAACGCCGTATGCGGCGCCTGACAAGACGAGC---ATATATAATACCTCCTTTGTGATGGTAAATGACGGTTTGTTTGTGCATACGTATATGTATTTGAATCAACCGTCTAAT---ATGTACTGTCAAGACCCGTTTGGTGTGGCCTTTGGGACCACATTTGAACAGGATCATATAGCTATTGTGGTGATAGCACCTGACAATAGAGGTAGCTGGACGGCTGCGTCAAAGCGGAATGTAACTACAGTTCATATATTAGTCTGTAGTAACGCAACCCTTTGTGCGTACCCTGCATTTAATCGTTGGGGTCCTGCGAGTAGCATATACGCAAGTGATGCTTTTGTAGACCATGGTAATTCCTGTTTTGTAAACAACAGTTTTGATATACCTATTAATACGTCTCGTATTAATTTGGCTTTTAGGTTCTTGGATGGTAACCTATTGCTGTACCATTCTAGGTGGCTTCCAGGTTCTGGGCTTAATTTAGCC---------ACAGATTACCCCCTACACTTCTTTATGAGTGTGGGTGTTGGCGCTAATTTGCCTAATGCACAGTTTTTCCAATCCGTAGTCCGCTATAAC------------CGGGGTGTTGAT------GAAGCGCGATGTCATACTTTTCAGAATAATTTGTATATAGCACCTTTGAGTTTACGTGAAGTTTTAGTGTCTTACAGTGATAGTGGCTTGCCACTTAAGGTGGCTGATTGTGCGGCCGATGCAGGTGATGAGCTATTTTGTGTTACTGGCTCATTTGAACCTGCCATTGGTGTGTACCCTCTTAGTAGGTACCGTGCTCAGGTTAGTGATTATGTGCACATTACACAGCAATCACAGGCCTGCAAACTGCCTTACGCTGACATTGTATCACCACCTCAGCCTATTGTCTGGCGTCGATATACAGTGTCTAGTTGCTCATTTGACTTTGAGAGCATAGTTAATAATTTACCTACCTATGATCTCAAGTGCTATGGTGTATCACCCGCGCGGCTTGCACAAATGTGCTATGCGGGTGTTACTCTGGACGTTATGCGCATAAACAAGACGCATTATAGCAATTTAATTGGTAATGTGCCTGATTTATTTACAAAGTATAATTATGCCCTGCCCACCAATTTTTATGGTTGTGTTCACGCATATTATATTAATGTTACTGATGGCCGCTATGCTTTAGCGACTCATTACCCGGCCACTGTCATTACACCAGGAGGTAGACAGCCTTATAATAGCTATGTGGCTACTGTTTTGAATACAGTT---AATAACTGGTGTACCAGAGCTAATTGTTTTGGTCTTGTAGTTATAGGATTGAAGCCTGCATCAGGTAGGCAGTTAGTCTGCCCTAAGGCTAATGATACTGAAGTTATAGTGCAGCAATGTGTTAAGTATAATTTGTACGGTTACACAGGTACCGGCGTTTTAAGC---CCGTCTAATTTAACCATACCAGATGGTAAGTTGTTTGTGGCTAATAACGCAGGTAATATTGTTGCTGTTAATGCTTCTGGCACCGTATATGGCATTTCATCTTGCGTGTCAGTTCCTGTCTCAGTAGGATATAACCCCTCATTTGAGCAGGCGCTACTATTTAATGGTTTAGCGTGTTCAGAGAGAGCAGTTGCTGTTAATATGCCGGCGTCAACTTATTGGCTATCGGTGTCTAGAAACGCAGCCCCACCTGATGGTGGTGTGTTTGACACACCTTCTGGTTGTGTTTATAATGTACGCAATTTAACTACCATGGTAGTTAATTCGTGTGATATGCCTATTGGCAACAGCCTTTGTTTAACTAATGTAACTTATGCTAAT------------AGGGCTACAGATAGTTTACCTAGGTTGAGTTTAGTCACTTATGATCCAACGGCTGCTAATGCT---GTCCAGTTGCTCACACCAGTTTACTGGGTTAGTATACCCACTAATTTTACTCTGGCTGCTACTTCTGAGTATATACAAACTAGCTCACCAAAGATCAATGTAGATTGCGCGAAGTATTTATGTGGCGACTCTGATAGGTGTATGAATGTGTTGCTGCAGTATGGCACATTTTGTGATGACGTTAATAAGGCGCTGGCCGAGGTCAGTGCTACAATTGACGCATCCGTTGTGTCATTGATGTCAGAACTCACATCGGACGTTGTACGTAAT---GAAAACATGCAGTTTGACACTACATACAACTTTACCTCACTTATGGGTTGTTTGGGATCAGATTGTGATTCTAAA---ATGTACAGGTCCGCTTTATCGGACTTGTTGTATAATAAGGTCAAGGTCACGGACCCTGGCTTTATGCAGTCCTATCAGAAGTGCATT---TCTCAGTGGGGTGGTGAAATTAGAGACCTTATGTGTACTCAAACCTTTAATGGTATTGCTGTTTTACCACCTATTGTTTCTCCAGGCATGCAAGCCTTGTACACATCATTACTTGTGGGTGCGGTAGCATCTGCAGGTTATACATTTGGCATTACTTCTGTCGGGGTTGTGCCTTTTGCGACGCAATTGCAATTTAGATTAAATGGCATAGGCGTCACTACGCAGGTGCTTGTAGAGAATCAGAAACTTATTGCTAATTCTTTTAACAATGCCCTTACTAATATACAGAAGGGTTTTGATGCCACTAATGAGGCGCTTAGTAAGATGCAGCTTGTTATTAACCAGCATGCTCAGCAATTGCAGACTTTGGTGAACCAGTTAGGTAATTCATTTGGTGCTATATCTGCTTCTATTAATGAAATATTTAGTCGTTTAGATGGTTTAGAGGCTGATGCTCAAGTGGATAGGCTTATTAATGGACGCACTGTTGTGCTTAATACTTATGTAACTCAGTTGCTTATTAAAGCTACAGAAGTGCGTAGTCAGGCCCTGTTAGCTAAGCAGAAAATTAGTGAGTGCGTTAAAGCACAATCTCTTCGTAATGATTTCTGTGGCAATGGCATACATGTTTTGTCTATACCACAGTTAGCTCCTAATGGTATTTTGTTTTTGCATTATACCTATAAACCGACGGCTTTTGCTGTTGTGCAAACTGCTGCTGGTCTGTGTTATAATGGCACAGGGTATGCACCTGTAGGTGGCATGTTTGTGTTACCTAATGGTACGCAGGCCTGGCACTTTACTAAAATGAATTTTTATAATCCTGTTAGTATTACAGTTGAGAACACGCAGGTTTTATCTACATGTGGCTTGAATTATTCACATGTTAACTACACTGTGGTGAACCCGTCGGTACCTAGTGATTTTGATTTTGAGGAAGAGTTTAATAAGTGGTATAAAAACCATAGCTCTATATTTAATAATACGTTCGACCCTAGTGCTTTTAATTTTTCTATGGTCGATGTAAATAAGCAACTGGCTACTCTTACAGATGTTGTTCAGCAGCTAAACAAGTCGTATATTGATTTGAAGCAATTAAATGTTTATGAACAGACCATTAAATGGCCGTGGTATATATGGCTCGCTATGATAGCGGGCCTTGTTGGCTTAGCCCTTGCAGTGGTCATGCTTTTATGTATGACTAACTGTTGTTCATGCTTCAAAGGCATGTGTTCATGCAAGCAGTGC------CATTATGATGAGGTAGATGATGTATATCCTGCTGTTCGTGTATATAATAAACGAACAGCA >UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 ---ATGTTGGTGATATTGTTAATGTTACCACTAGTTTTTGCT---AGACCATCTTGTGTTACT------ATTAGTAACTTACAGTATGTTGATCATAACTACACTCACAGATCTTTTGATATGAGTGCAGTTTCACGTGTATTTCCTGATCCCTTTGTAGCCTATTCTGGTCAGACACTTAAGCAGTCCCTTTACATAGCAGATACGTCTAATACCACGGTTTATCCAGTAACACCACCTGCTGTTAATGGAAAACCAGGT---ATTTATAATTTGACAATATTGCCTGTCGGCGATGGTTTCTTAGTTCAAACTTATATGTACAAGGACCAACCCAGCGAC---ACTTATTGTCAGGAGCCATTTGGCGTTGCGTTTGGTACGACATTTGAGTACGACCGTATCGCTATTGTTACTATAGTACCAGGTTATAAAGGTTCTTGGTCTGCAGTTCAGAAACAGACTACTACTAATGTCAATATTTTGGTCTGTAGTAATGCAACTTTGTGTGCATATCCTGCATTTAACCGATGGGGTCCCGCAGGTACTATTTATACTACTAATGATTTTGTTGTATATGGCGATTCTTGCTTTATAAACAACACTTTCACAATATCTATTAATACTTCTAGGTTAAACCTGGGGTTTAGGTTTAATGATGGGAACTTGTACTTGTACCATTCTAAATGGTTGCCTATGCAAGGGCTTAATTTGATG---------GTGGATTACCCTCTGCACTTTCTTATGAGTGTAGGGGTGGGTGCAAATCTACCAAATATGCAGTTTTATCAGGCTGTTGTGCGTCAAGGTACTCCTCCAGTTACTGGCGCTGATAAAAATGATGCCAATTGTTTGGCTTTTCAGAATAATTTGTATCTAGCATATATAAGTAAGCGGGATTTGCTTGTGTCTTATGATGATAATGGACTTCCCATTGCTGTAGCAGATTGTTCCCAGAACGCTGGGGATGAATTGTACTGTGTCACAGGCACTTTTAGTCCGCAGGTTGGTGTTTACCCATTAAGTAGGTATAGAGCTTTAGTTAGTGATTATGTTCAAATATCGCAGCAAGGTAGCATTTGTAGCCTGCCTTATTCCGATATTTTGAAACCACCGCAACCTATAGTGTGGAAGCGTCACACAGTTACAAATTGTTCATTTGACTTTGACGCTATTGTTAATAGACTCCCTACTTTTCAGCTTAAATGCTTTGGGGTGTCACCTGCTAAGTTGGCCCAAATGTGCTATTCCAGTGTTACACTGGACATTTTTAGAGCCAATACAACTCACCTAGCTAATATGTTAGGTAAGGTTCCTGATGTTTTCAGTAAGTATAATTATGCACTTCCACCCGATTTTTACGGGTGTGTGCATTCGTATTATATTAATGATAGCAGCCGCATGTATGCCATAGCGCAGCAATGGCCTGCTACCGTTATAGCACCAGGTGGCCGCCAACCTTACAATAGTTATGTTGGCACCGTATTAAATACACCA---AACCCTACGTGCACCCAGCTAACTTGCTTTGGTGTGGTAGTTATTTCACTTAAGCCAGCCTCCGGTAAACATCTAGTTTGTCCTAGTGCCAATGACACGGATTTGGTGACGCGCGAATGTGTTAAGTATAATCTTTATGGTTATACTGGTACTGGTGTATTCAAT---GAGAGCTCATTGGTTATACCAGATTCTAAATTATTCGTGGCTAGTTCCACGGGTGATATTATTGCTGCTAAAGTTAGAGGCAAGGTTTATTCTATAACACCTTGTGTTTCGGTGCCTATATCCGTAGGTTATGACCCTTCTTTTGAGAGAGCACTACTATTTAATGGTTTATCTTGTAGTGAACGCTCCGTAGCTGTCAGCTTACCAGCCTCTGATTACTGGTTAGCTGCTGTTGCAGATAATGCTAGTACTGGTGTAGTTACATTTGACACGCTTTCGGGTTGCGTGCATAATGTTCGTAATGCCACTGATATAACTGTGCCGACATGTTTAATGCCTTTAGGTAACAGTTTATGTTTAGCTAATATTACACAACCCTCGCAGTATGGTTTAAGTACTACTAGCAGTGTAAACCTTTTGAGTTTAGTTACTTATGACCCCACCTTTCAGGGTGGT---GTTAAAGTTATGTCACCTGTTTACTGGATTAGCATCCCAACAAATTTTACATTGGGTGCTATTACTGAATACATTCAAACTACGTCACCTAAAGTTAATGTGGACTGCGTCAAATATTTGTGTGGAGATTCTGAACGTTGCACTACTGTGTTGCTGCAGTATGGCACATTTTGTGATGATGTCAATAAGGCGTTGTCAGAAGTAAGTTCTATAATTGATGCTAGCATGATATCGCTAGTTTCAGAGATTACAGCTGATGTAGTTCGTAGT---GAGAATGCTTTATTCGACACTACCTATAACTTCACTGGTTTGTTGGGTTGTGTAGGTTCTAATTGTAATGACCGCACCACTTATCGGTCAGCACTTTCTGACTTGTTATATAACAAGGTAAAAGTCACTGACCCAGGTTTTATGAGCTCTTACCAAAAGTGTATA---TCTCAGTGGGGTGGTGATATCAGGGATTTGTTCTGTACTCAGAACTTTAATGGTATCTCTGTTTTGCCCCCCATAGTGTCACCAGGCATGCAAGCGCTGTACACTTCCTTATTAGTGGGTGCAGTTGCGTCTGCTGGATACACATTTGGTGTAACTTCAGTAGGCGTTATTCCTTTTGCCACTCAGCTACAATTTAGACTTAATGGTCTAGGTGTTACCACACAGGTGCTGGTGGAGAACCAGCAGCTTATAGCTAACTCTTTTAATAAAGCGCTTGTTAGTATACAACAAGGCTTTGATGCTACGAACGAGGCACTTAGTAAGATGCAGTCCGTTATTAATCAACATGCACAGCAGCTGCAGACATTAGTTTCGCAGTTGGGAAATTCATTTGGTGCTATTTCGTCTTCTATTAATGAGATTTTCAGTCGGTTAGATGGTTTAGAAGCCAACGCGCAGGTAGACAGACTCATTAATGGGCGCATGGTTGTACTTAATACCTATGTGACACAGCTTCTCATTAAAGCTTCTGAAGTTAAGTCGCAGGCTCTACTCGCAAAGCAGAAAATTAGCGAGTGTGTTAAATCGCAGTCTTTGCGTAATGACTTCTGTGGTAATGGTACTCATGTGTTTTCCGTACCGCAGTTAGCTCCTAATGGTATAATGTTTTTGCATTATACATACAAGCCTACTTCATATGCATTGGTACAAACAGCTGCAGGTCTTTGTTTAAATAACACTGGCTATGCACCACGTGATGGTTTGTTTGTTTTGCCCAATGGTTCTATATACTGGCAGTTTACTAAAATGAATTTTTATAATCCTGTCAGACTTACTAATAGTAACACTCAGGTGCTTACTACGTGTAGTGTTAACTATACTACAGTTAATTACACTGTGTTGCCTCCTACGGACAACATGGATTTTAACTTTACTGCAGAGTTTGAGAAGTGGTATAAAAATCACAGTTCTCAATTTAATAACACTTTCAACCCTGGGGATTTTAATTTTTCCACGGTTGATATACAGAATGAACTTAACACCCTTAATGCTGTTGTTAAGCAGCTGAATGAGTCTTTTATTGACCTGAAGAAGTTAAATGTTTATGAACAGACCATTAAATGGCCGTGGTATATATGGCTTGCTATGATAGCTGGCTTAGTTGGTTTAGCTCTAGCAGTGGTTATGCTATTATGTATGACTAATTGTTGTTCATGCTTTAAAGGTATGTGTGCATGTAAACCTTGC------CATTATGACGAGGTCGAAGATGTTTATCCTGCAGTTCGTGTATATAATAAACGAACAGCA >UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 ---ATGTTGGTGATATTGCTAATATTGCCTTTAGTACATGCT---AGACCCAGTTGTCTCACT------GTGTCACCTTTACAGTATTTAGAACATAATATTTCTTATGTTTCCTTGTCTGTTAGTAAAGTGACACGTTTAGTGCCGGATCCTTATGTAGCGTATTCCGGGCAGACTATACGTCAAAGTTTGTATTATGCGGACACTTCTAATGTTACTGTGTATCCCGTAACGCCGTATGCGGCGCCTGACAAGACGAGC---ATATATAATACCTCCTTTGTGATGGTAAATGACGGTTTGTTTGTGCATACGTATATGTATTTGAATCAACCGTCTAAT---ATGTACTGTCAAGACCCGTTTGGTGTGGCCTTTGGGACCACATTTGAACAGGATCATATAGCTATTGTGGTGATAGCACCTGACAATAGAGGTAGCTGGACGGCTGCGTCAAAGCGGAATGTAACTACAGTTCATATATTAGTCTGTAGTAACGCAACCCTTTGTGCGTACCCTGCATTTAATCGTTGGGGTCCTGCGAGTAGCATATACGCAAGTGATGCTTTTGTAGACCATGGTAATTCCTGTTTTGTAAACAACAGTTTTGATATACCTATTAATACGTCTCGTATTAATTTGGCTTTTAGGTTCTTGGATGGTAACCTATTGCTGTACCATTCTAGGTGGCTTCCAGGTTCTGGGCTTAATTTAGCC---------ACAGATTACCCCCTACACTTCTTTATGAGTGTGGGTGTTGGCGCTAATTTGCCTAATGCACAGTTTTTCCAATCCGTAGTCCGCTATAAC------------CGGGGTGTTGAT------GAAGCGCGATGTCATACTTTTCAGAATAATTTGTATATAGCACCTTTGAGTTTACGTGAAGTTTTAGTGTCTTACAGTGATAGTGGCTTGCCACTTAAGGTGGCTGATTGTGCGGCCGATGCAGGTGATGAGCTATTTTGTGTTACTGGCTCATTTGAACCTGCCATTGGTGTGTACCCTCTTAGTAGGTACCGTGCTCAGGTTAGTGATTATGTGCACATTACACAGCAATCACAGGCCTGCAAACTGCCTTACGCTGACATTGTATCACCACCTCAGCCTATTGTCTGGCGTCGATATACAGTGTCTAGTTGCTCATTTGACTTTGAGAGCATAGTTAATAATTTACCTACCTATGATCTCAAGTGCTATGGTGTATCACCCGCGCGGCTTGCACAAATGTGCTATGCGGGTGTTACTCTGGACGTTATGCGCATAAACAAGACGCATTATAGCAATTTAATTGGTAATGTGCCTGATTTATTTACAAAGTATAATTATGCCCTGCCCACCAATTTTTATGGTTGTGTTCACGCATATTATATTAATGTTACTGATGGCCGCTATGCTTTAGCGACTCATTACCCGGCCACTGTCATTACACCAGGAGGTAGACAGCCTTATAATAGCTATGTGGCTACTGTTTTGAATACAGTT---AATAACTGGTGTACCAGAGCTAATTGTTTTGGTCTTGTAGTTATAGGATTGAAGCCTGCATCAGGTAGGCAGTTAGTCTGCCCTAAGGCTAATGATACTGAAGTTATAGTGCAGCAATGTGTTAAGTATAATTTGTACGGTTACACAGGTACCGGCGTTTTAAGC---CCGTCTAATTTAACCATACCAGATGGTAAGTTGTTTGTGGCTAATAACGCAGGTAATATTGTTGCTGTTAATGCTTCTGGCACCGTATATGGCATTTCATCTTGCGTGTCAGTTCCTGTCTCAGTAGGATATAACCCCTCATTTGAGCAGGCGCTACTATTTAATGGTTTAGCGTGTTCAGAGAGAGCAGTTGCTGTTAATATGCCGGCGTCAACTTATTGGCTATCGGTGTCTAGAAACGCAGCCCCACCTGATGGTGGTGTGTTTGACACACCTTCTGGTTGTGTTTATAATGTACGCAATTTAACTACCATGGTAGTTAATTCGTGTGATATGCCTATTGGCAACAGCCTTTGTTTAACTAATGTAACTTATGCTAAT------------AGGGCTACAGATAGTTTACCTAGGTTGAGTTTAGTCACTTATGATCCAACGGCTGCTAATGCT---GTCCAGTTGCTCACACCAGTTTACTGGGTTAGTATACCCACTAATTTTACTCTGGCTGCTACTTCTGAGTATATACAAACTAGCTCACCAAAGATCAATGTAGATTGCGCGAAGTATTTATGTGGCGACTCTGATAGGTGTATGAATGTGTTGCTGCAGTATGGCACATTTTGTGATGACGTTAATAAGGCGCTGGCCGAGGTCAGTGCTACAATTGACGCATCCGTTGTGTCATTGATGTCAGAACTCACATCGGACGTTGTACGTAAT---GAAAACATGCAGTTTGACACTACATACAACTTTACCTCACTTATGGGTTGTTTGGGATCAGATTGTGATTCTAAA---ATGTACAGGTCCGCTTTATCGGACTTGTTGTATAATAAGGTCAAGGTCACGGACCCTGGCTTTATGCAGTCCTATCAGAAGTGCATT---TCTCAGTGGGGTGGTGAAATTAGAGACCTTATGTGTACTCAAACCTTTAATGGTATTGCTGTTTTACCACCTATTGTTTCTCCAGGCATGCAAGCCTTGTACACATCATTACTTGTGGGTGCGGTAGCATCTGCAGGTTATACATTTGGCATTACTTCTGTCGGGGTTGTGCCTTTTGCGACGCAATTGCAATTTAGATTAAATGGCATAGGCGTCACTACGCAGGTGCTTGTAGAGAATCAGAAACTTATTGCTAATTCTTTTAACAATGCCCTTACTAATATACAGAAGGGTTTTGATGCCACTAATGAGGCGCTTAGTAAGATGCAGCTTGTTATTAACCAGCATGCTCAGCAATTGCAGACTTTGGTGAACCAGTTAGGTAATTCATTTGGTGCTATATCTGCTTCTATTAATGAAATATTTAGTCGTTTAGATGGTTTAGAGGCTGATGCTCAAGTGGATAGGCTTATTAATGGACGCACTGTTGTGCTTAATACTTATGTAACTCAGTTGCTTATTAAAGCTACAGAAGTGCGTAGTCAGGCCCTGTTAGCTAAGCAGAAAATTAGTGAGTGCGTTAAAGCACAATCTCTTCGTAATGATTTCTGTGGCAATGGCACACATGTTTTGTCTATACCACAGTTAGCTCCTAATGGTATTTTGTTTTTGCATTATACCTATAAACCGACGGCTTTTGCTGTTGTGCAAACTGCTGCTGGTCTGTGTTATAATGGCACAGGGTATGCACCTGTAGGTGGCATGTTTGTGTTACCTAATGGTACGCAGGCCTGGCACTTTACTAAAATGAATTTTTATAATCCTGTTAGTATTACAGTTGAGAACACGCAGGTTTTATCTACATGTGGCTTGAATTATTCACATGTTAACTACACTGTGGTGAACCCGTCGGTACCTAGTGATTTTGATTTTGAGGAAGAGTTTAATAAGTGGTATAAAAACCATAGCTCTATATTTAATAATACGTTCGACCCTAGTGCTTTTAATTTTTCTATGGTCGATGTAAATAAGCAACTGGCTACTCTTACAGATGTTGTTCAGCAGCTAAACAAGTCGTATATTGATTTGAAGCAATTAAATGTTTATGAACAGACCATTAAATGGCCGTGGTATATATGGCTCGCTATGATAGCGGGCCTTGTTGGCTTAGCCCTTGCAGTGGTCATGCTTTTATGTATGACTAACTGTTGTTCATGCTTCAAAGGCATGTGTTCATGCAAGCAGTGC------CATTATGATGAGGTAGATGATGTATATCCTGCTGTTCGTGTATATAATAAACGAACAGCA >UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 ---ATGTTGGTGATATTGTTAATGTTACCACTAGTTTTTGCT---AGACCATCTTGTGTTACT------ATTAGTAACTTACAGTATGTTGATCATAACTACACTCACAGATCTTTTGATATGAGTGCAGTTTCACGTGTATTTCCTGATCCCTTTGTAGCCTATTCTGGTCAGACACTTAAGCAGTCCCTTTACCTAGCAGATACGTCTAATACCACGGTTTATCCAGTAACACCACCTGCTGTTAATGGAAAACCAGGT---ATTTATAATTTGACAATATTGCCTGTCGGCGATGGTTTCTTAGTTCAAACTTATATGTACAAGGACCAACCCAGTGAC---ACTTATTGTCAGGAACCATTTGGCGTTGCGTTTGGTACGACATTTGAGTACGACCGTATCGCTATTGTTACTATAGTACCAGGTTATAAAGGTTCTTGGTCTGCAGTTCAGAAACAGACTACTACTAATGTTAATATTTTGGTCTGTAGTAATGCAACTTTGTGTGCATATCCTGCATTTAACCGATGGGGTCCCGCAGGTACTATTTATACTACTAATGATTTTGTTGTATATGGCGATTCTTGCTTTATAAACAACACTTTCACAATATCTATTAATACTTCTAGGTTAAACCTGGGGTTTAGGTTTAATGATGGGAACTTGTACTTGTACCATTCTAAATGGTTGCCTATGCAAGGGCTTAACTTGATG---------GTGGATTACCCTCTGCACTTTCTTATGAGTGTAGGGGTGGGTGCAAATCTACCAAATATGCAGTTTTATCAGGCTGTTGTGCGTCAAGGTACTCCACCAGTTACAGGCGCTTATAAAAATGATGCCAATTGTTTGGCCTTTCAGAATAATTTGTATCTAGCATATATAAGTAAGCGGGATTTGCTTGTGTCTTATGATGATAATGGACTTCCCATTGCTGTAGCAGATTGTTCCCAGAACGCTGGGGATGAATTGTACTGTGTCACAGGCACTTTTAGTCCGCAGGTTGGTGTTTACCCATTAAGTAGGTATAGAGCTTTAGTTAGTGATTACGTTCAAATATCGCAGCAAGGTAGCATTTGTAGCCTGCCTTATTCCGATATTTTGAAACCACCGCAACCTATAGTGTGGAAGCGTCACACAGTTACAAATTGTTCATTTGACTTTGACGCTATTGTTAATAGACTCCCTACTTTTCAGCTTAAATGCTTTGGGGTGTCACCTGCTAAGTTGGCTCAAATGTGTTATTCCAGTGTTACACTGGACATTTTTAGAGCCAATACAACTCACCTAGCTAATATGTTAGGTAAGGTTCCTGATGTTTTCAGTAAGTATAATTATGCACTTCCACCCGATTTTTATGGGTGTGTGCATTCGTATTATATTAATGATACCAGCCCCATGTATGCCATAGCGCAGCAGTGGCCTGCTACCGTTATAGCACCAGGTGGCCGCCAACCTTACAATAGTTATGTTGGCACCGTATTAAATACACCA---AACCCCAAGTGCACTCAGCTAACTTGCTTTGGTGTGGTAGTTATTTCACTTAAGCCGGCCTCCGGTAAACATCTAGTTTGTCCTAGTGCCAATGACACGGATTTGGTGACGCGCGAATGTGTTAAGTATAATCTTTATGGTTATACTGGTACTGGTGTATTCAAT---GAGAGTTCATTGGTTATACCAGATTCTAAATTATTCGTGGCTAGTTCCACGGGTGATATTATTGCTGCTAAAGTTAGAGGCAAGGTTTATTCTATAACACCTTGTGTTTCGGTGCCTATATCCGTAGGTTATGACCCTTCTTTTGAGAGAGCACTACTATTTAATGGTTTATCTTGTAGTGAACGCTCCGTAGCTGTCAGCTTACCAGCCTCTGATTACTGGGTAGCTGCTGTTGCAGATAATGCTAGTACTGGTGTAGTTACATTTGACACGCTTTCGGGTTGCGTGCATAATGTTCGTAATGCCACTGATATAACTGTGCCGACATGTTTAATGCCTTTAGGTAACAGTTTATGTTTAGCTAATATTACACAACCCTCGCAGTATGGTTTAAGTACTACTAGCAGTGTAAACCTTTTGAGTTTAGTTACTTATGACCCCACCTTTCAAGGTGGT---GTTAAAGTTATGTCACCTGTTTATTGGATTAGCATCCCAACAAATTTTACATTGGGTGCTATTACTGAATACATTCAAACTACGTCACCTAAAGTTAATGTGGACTGCGTCAAATATTTGTGTGGAGATTCTGAACGTTGCACTACTGTGTTGCTGCAGTATGGCACATTTTGTGATGATGTCAATAAGGCGTTGTCAGAAGTAAGTTCTATAATTGATGCTAGCATGATATCGCTAGTTTCAGAGATTACAGCTGATGTAGTTCGTAGT---GAGAATGCTTTATTCGACACTACCTATAACTTCACTGGTTTGTTGGGTTGTGTAGGTTCTAATTGTAATGACCGCACCACTTATCGGTCAGCACTTTCTGACTTGTTATATAACAAGGTAAAAGTTACTGACCCAGGTTTTATGAGCTCTTACCAAAAGTGTATA---TCTCAGTGGGGTGGTGATATCAGGGATTTGTTCTGTACTCAGAACTTTAATGGTATCTCTGTTTTGCCCCCCATAGTGTCACCAGGCATGCAAGCGCTGTACACTTCCCTATTAGTGGGTGCAGTTGCGTCTGCTGGATACACTTTTGGTGTAACTTCAGTAGGCGTTATTCCTTTTGCCACTCAGCTACAATTTAGACTTAATGGTCTAGGTGTTACCACACAGGTGCTGGTGGAGAACCAGCAGCTTATAGCTAACTCTTTTAATAAAGCGCTTGTTAGTATACAACAAGGCTTTGATGCTACGAATGAGGCACTTAGTAAGATGCAGTCTGTTATCAATCAACATGCACAGCAGCTGCAGACATTAGTTTCGCAGTTGGGAAATTCATTTGGTGCTATTTCGTCTTCTATTAATGAGATTTTCAGTCGGTTAGATGGTTTAGAAGCCAACGCGCAGGTAGACAGACTCATTAATGGGCGCATGGTTGTACTTAATACCTATGTGACACAGCTTCTCATTAAAGCTTCTGAAGTTAAGTCGCAGGCTCTACTCGCAAAGCAGAAAATTAGTGAGTGTGTTAAATCGCAGTCTTTGCGTAATGACTTCTGTGGTAATGGTACTCATGTGTTTTCCGTACCACAGTTAGCCCCTAATGGTATAATGTTTTTGCATTATACATACAAGCCTACTTCATATGCATTGGTACAAACAGCTGCAGGTCTTTGTTTAAATAACACTGGCTATGCACCACGTGATGGTTTGTTTGTTTTGCCCAATGGCTCTATATACTGGCAGTTTACTAAAATGAATTTTTATAATCCTGTCAGACTTACTAATAGTAACACTCAGGTTCTTACTACGTGTAGTGTTAACTATACTACAGTTAATTATACTGTGTTGCCACCAACGGACAACATGGATTTTAACTTTACTGCAGAGTTTGAGAAGTGGTATAAAAATCACAGTTCTCAATTTAATAATACTTTCAACCCTGGGGATTTTAATTTTTCCACGGTTGATATACAGAATGAACTTAACACCCTTAATGCTGTTGTTAAGCAGCTGAATGAGTCTTTTATTGACCTGAAGAAGTTAAATGTTTATGAACAGACCATTAAATGGCCGTGGTATATATGGCTTGCTATGATAGCTGGCTTAGTTGGTTTAGCTCTAGCAGTGGTTATGCTATTATGTATGACTAATTGTTGTTCATGCTTTAAAGGTATGTGTGCATGTAAACCTTGC------CATTATGACGAGGTCGAAGATGTTTATCCTGCAGTTCGTGTATATAATAAACGAACAGCA
>BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MLLILVLGVSLAAASRPECFN-PRFTLTPLNHTLNYTSIKAKVSNVLLPDPYIAYSGQTLRQNLFMADMSNTILYPVTPPANGANGGFIYNTSIIPVSAGLFVNTWMYRQPASSRAYCQEPFGVAFGDTFENDRIAILIMAPDNLGSWSAVAPRNQTNIYLLVCSNATLCINPGFNRWGPAGSFIAPDALVDHSNSCFVNNTFSVNISTSRISLAFLFKDGDLLIYHSGWLPTSNFEHGFSRGSHPMTYFMSLPVGGNLPRAQFFQSIVRSN-----AIDKGDGMCTNFDVNLHVAHLINRDLLVSYFNNGSVANAADCADSAAEELYCVTGSFDPPTGVYPLSRYRAQVAGFVRVTQRGSYCTPPYSVLQDPPQPVVWRRYMLYDCVFDFTVVVDSLPTHQLQCYGVSPRRLASMCYGSVTLDVMRINETHLNNLFNRVPDTFSLYNYALPDNFYGCLHAFYLNSTAP-YAVANRFP---IKPGGRQSNSAFIDTVINAA-HYSPFSYV-YGLAVITLKPAAGSKLVCPVANDTVVITDRCVQYNLYGYTGTGVLSKNTSLVIPDGKVFTASSTGTIIGVSINSTTYSIMPCVTVPVSVGYHPNFERALLFNGLSCSQRSRAVTEPVSVLWSA-----SATAQDAFDTPSGCVVNVELRNTTIVNTCAMPIGNSLCFINGSIAT----ANADSLPRLQLVNYDPLYDNSTATPMTPVYWVKVPTNFTLSATEEYIQTTAPKITIDCARYLCGDSSRCLNVLLHYGTFCNDINKALSRVSTILDSALLSLVKELSINTRDEVTTFSFDGDYNFTGLMGCLGPNCGAT-TYRSAFSDLLYDKVRITDPGFMQSYQKCIDSQWGGSIRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAVASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNALVNIQKGFTETSIALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIFSRLEGLAANAEVDRLINGRMMVLNTYVTQLLIQASEAKAQNALAAQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGVLFIHYAYTPTEYAFVQTSAGLCHNGTGYAPRQGMFVLPNNTNMWHFTTMQFYNPVNISASNTQVLTSCSVNYTSVNYTVLEPSVPGDYDFQKEFDKFYKNLSTIFNNTFNPNDFNFSTVDVTAQIKSLHDVVNQLNQSFIDLKKLNVYEKTIKWPWYVWLAMIAGIVGLVLAVIMLMCMTNCCSCFKGMCDCRRCCGSYDSYDDVYPAVRVNKKRTV >BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 -MLVILLILPLVSA-RPSCVT--IENLSYVAHNFTHVSFSMSKVSRIFPDPFVAYSGQTLRQSLYIADTSNTTVYPITPPPVGGNPG-IYNLTTLPVNEGFLVHTFMYRDQPVD-MYCQEPFGVAFGTTFQNDLIAIVMIVPGQYGSWAEVKRQNTTNVHILVCGNATLCQYPAFNRWGPAGSIYSSDAFTTYGESCFINNTFSINLNTSRLNLGFRFSDGNLYIYHSSWLPISGLNLM---LDYPLHYYMSVGVGSNLPNMQFFQSVSRKGTPPAQGANNNDGSCLAFQNNLYLAYVTRRELLVSYDDNGFPTAVADCSYDAGDELYCVTGSFTPQVGVYPLSRYRAQVSGYVQITQQGDTCVLPYSDIVRPPQPVVWRRYTVTSCSFDFEAIVNRLPTFELKCFGISPARLAQMCYSSVTLDLFRANTTHLANMLGGVPDLFSKYNYALPSNFYGCVHAYYINDTNKDYAIAQRWPATPITPGGRQPYSDYVRTVLNTP-NPSCTTLTCFGVVVISLKPASGRKLVCPSVNDTDMRTNECVKYNLYGYTGTGVFN-VSTLTIPDSKLFVANGAGDIIAASVKGTVYSITPCVSVPVSVGYDPNFERALLFNGLACKERAVAVSMPASLFWRTVVQDNITNSVTTFDTLSGCVYNVYNATNIVVQSCSMPLGNSLCLANLTTST---VSVSRAGNLLSLVTYDPTAIAG-VKVMTPVYWISIPTNFTLGAVSEYIQTTSPKINVDCVKYLCGDSERCTTVLLQYGTFCNDVNKALSEVSAIIDASMVSLVSEITADVVRS-ENAHFDTTYNFTGLLGCVGSSCSST--YRSALSDLLYNKVKVTDPGFMSSYQKCI-SQWGGDVRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAVASAGFTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKALVSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIFSRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVRAQALLAKQKISECVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTAYAVVQTAAGLCFNNTGYAPVGGLFVLPNDSIYWHFTKLNFYNPVNLSNSNTQVLTTCSVNYTAVNYTVLDPVVNSDFNFTAEFDKWYKNHSSYFNNTFNPGDFNFSTVDIERELSTLTEVVRQLNESFIDLKKLNVYEQTIKWPWYVWLAMIAGLVGLALAVVMLLCMTNCCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA >BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MLLIAFILLPVVTASRPFCLGRDFDVSRVLPHNISTGSFVVNKLSTLLPDPYIAYSGQTVRQTLFVANATDTTIYPITPYKEGDRAY-YYNTSLYLVSQGFFVHSYMFKNQIEG-LYCQQPFGVVFGNTFEQDRIAIVIIAPDVYGRWITATPRSYTNVTILVCSNATICANPAFNRWGPAGDYLANNAFTEHDDSCFINNTMRIPYNTSRINLAFRFQDGNLLIYYSDWLPHGSLDLS---APWPLNFYTSVAVGGNLKYAQFFQSVVRNYNTPTQSLT--DGNCVGDLVNLYVAPLVKRELLVQYSLAGRPINVADCALDSGEELYCVTGTFTPDAGVYSLSRYRAQTVGHVSITQQFETCDIPYAALQTPPQPIAWRRYAVSKCGFDFEAVINRLPTFELKCFGVSPARLASMCYGKVTIDVFRINVTHLANLIAGVPDAFSKYNYALPRDFYGCVHAFYVNMSSD-YIIADSWPAVVIQPGGRQTDSSLVGTWLNSPAKSHCTILSCFGVAVIGLQPASGTQLVCPKQNDTTLIEDQCVTYNVYGYTGTGVFT-TSNLTIPDNKLFSASATGAISAVSIHNAVYAISPCVSVPVSVGFSPNFDKVLLFNGLACKERAVAVSIPASDYWMRV---RSSENDTIFDTESGCVYNAHNRTDLVVNECSLPLGNSLCLINDTAST-----RREASNLLTLVSFQPGIIAS-VKVLTPVYWVRVPTNFTLTATTEFIETTAPKITIDCARYLCGDSSRCLAVLEQYGTFCDDVNTALQRVNTMLDAAVVSLTSQLVSDIVPT-ENSNFDSTYNFTALMGCLGSSCNSK---RSAISDLLYNKVKIADPGFMDSYQKCIDSQWGGNIRDLICTQVFNGIAVLPPIVSPGMQALYTSLLVGAVASSGYTFGITSVGVIPFATQLQFRLNGIGVTTQVLVDNQKLIASSFNNALNQIQKGFDATNSALSKIQAVINQHATQLQTLVLQLGNTFGAISSSINIIFSRLEGLEADAEVDRLISGRMVVLNTYVTQLLVQASRIKAQSDLALQKINECVKSQTLRNEFCGNGTHVLSVPQLAPNGIMFIHYSYTPTQYATVQTAAGLCFNGTGYAPRNGLFILPNNSNFWYFTQANFYNPVNISNSNTQVLESCSVNYTTVNYTILSPQEPLYNNFDEEFNKFYKNLSSVFNNTFNPGAFNFSTVELQSEIATLNEVVQQLNKSFIDLKQMNVYEQTIKWPWYVWLAMIAGLVGLALAVVMLLCMTNCCSCFKGMCSCRHC--YYDEIEDVYPAVRVHNKRTA >BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPDPYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDGLFVHTYMYLNQPSN-MYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTAASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVNNSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA---TDYPLHFFMSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSLREVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQVSDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPTYDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYALPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNTV-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGYTGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSVGYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTPSGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSLVTYDPTAANA-VQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKYLCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVRN-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYNKVKVTDPGFMQSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAVASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNALTNIQKGFDATNEAISKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIFSRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGLCYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLNYSHVNYTVVNPSVPSDFDFEEEFNKWYKNHTSIFNNTFDPSAFNFSMVDVNKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLALAVVMLLCMTNCCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA >HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MLLILVLGVSLAAASRPECFN-PRFTLTPLNHTLNYTSIKAKVSNVLLPDPYIAYSGQTLRQNLFMADMSNTILYPVTPPANGANGGFIYNTSIIPVSAGLFVNTWMYRQPASSRAYCQEPFGVAFGDTFENDRIAILIMAPDNLGSWSAVAPRNQTNIYLLVCSNATLCINPGFNRWGPAGSFIAPDALVDHSNSCFVNNTFSVNISTSRISLAFLFKDGDLLIYHSGWLPTSNFEHGFSRGSHPMTYFMSLPVGGNLPRAQFFQSIVRSN-----AIDKGDGMCTNFDVNLHVAHLINRDLLVSYFNNGSVANAADCADSAAEELYCVTGSFDPPTGVYPLSRYRAQVAGFVRVTQRGSYCTPPYSVLQDPPQPVVWRRYMLYDCVFDFTVVVDSLPTHQLQCYGVSPRRLASMCYGSVTLDVMRINETHLNNLFNRVPDTFSLYNYALPDNFYGCLHAFYLNSTAP-YAVANRFP---IKPGGRQSNSAFIDTVINAA-HYSPFSYV-YGLAVITLKPAAGSKLVCPVANDTVVITDRCVQYNLYGYTGTGVLSKNTSLVIPDGKVFTASSTGTIIGVSINSTTYSIMPCVTVPVSVGYHPNFERALLFNGLSCSQRSRAVTEPVSVLWSA-----SATAQDAFDTPSGCVVNVELRNTTIVNTCAMPIGNSLCFINGSIAT----ANADSLPRLQLVNYDPLYDNSTATPMTPVYWVKVPTNFTLSATEEYIQTTAPKITIDCARYLCGDSSRCLNVLLHYGTFCNDINKALSRVSTILDSALLSLVKELSINTRDEVTTFSFDGDYNFTGLMGCLGPNCGAT-TYRSAFSDLLYDKVRITDPGFMQSYQKCIDSQWGGSIRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAVASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNALVNIQKGFTETSIALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIFSRLEGLAANAEVDRLINGRMMVLNTYVTQLLIQASEAKAQNALAAQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGVLFIHYAYTPTEYAFVQTSAGLCHNGTGYAPRQGMFVLPNNTNMWHFTTMQFYNPVNISASNTQVLTSCSVNYTSVNYTVLEPSVPGDYDFQKEFDKFYKNLSTIFNNTFNPNDFNFSTVDVTAQIKSLHDVVNQLNQSFIDLKKLNVYEKTIKWPWYVWLAMIAGIVGLVLAVIMLMCMTNCCSCFKGMCDCRRCCGSYDSYDDVYPAVRVNKKRTV >Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 -MFLIFLLLSQVNADRPSCFS-SPDLTTTKQHIISNVSFYVQVKNLLLPDPYIAYSGQVLKQHLPTADLSNVIKYPITPDLVDATKGYVFNTTILPVDLGVFVHTWMYRQPSSSNLYCQQPFGVAFGNTFVEDRIAVIVIAPDNLGSWVHSSPRDQTTVHILVCSNATLCANPGFNRWGPAGNILVRNPLVEHDNSCFVNNSFNIPLSTARLNLAFLFKDGNLLVYHSPWLPHGDFNVN---GTYPLTYFMTLPVGSNLRHAQYFQSVVRND----YAVA--DGKCRDFDLNLYIAPIVYKELLVQYSINGSVENAAECANSASDELYCVTGTFEPQTGVYALSRYRAQVQGFVRITQQADVCQPPYAALENPPQPVVWRRYLVRDCAFDFATVINNLPTYQLHCYGVSPSRLASMCYNTITIDVMRINTTHLNNLLQKVPDAFSLYNYAIPSDFYGCIHAYYLNVTDT-YAIATQRR---ISPGGRQDDSFYINTVLGAA-QYSGFNTLLYGLSVISLTPASGNKLVCPIANDTAVVTNQCVQYNLYGYTGTGVLNATTAISIPSDKVFSASDTGDIVAVRVNGTVYTIRPCVSVPISVGYHAGYERALLFNGLSCADRTSAITMPASTYWSTA---RAQSASNYYDTISGCVYNVDYNNATTVNQCVMPLGNSLCLVPNTQRV--------AGSRLTLVNFDPMYVSDSVTSLTPIYWVNIPTNFTLAATEEFIQTTAPKMNIDCARYLCGDSSRCLTVSLQYGTFCDDINKALLRVSQLLDTSLLALFKEFSTNVRPE-AELSLDGAYNFTGLMGCLGSNCGGK-SHRSALSELLYNKVKVADPGFMSSYQKCIDSQWGGEVRDLICTQTYNGISVLPPIVAPGMQALYTSLLVGAVASSGYTFGITSVGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNKALTSIQEGFTATNQALAKMQAVINQHASQLQTLVIQLGNSFGAISSSLNEIFSRLEGLAADAEVDRLINGRMVVLNTYVTQLLIQASELRAQNQLAVQKISECVKAQSSRNDFCGNGTHVLSIPQLAPNGVLFIHYTYRPTEYAYVQTSAGLCYNKTGYAPKGGMFVLPNNTNLWHFTAMNFYNPVNITVFNTQILTSCSLNFTAVNYTVLEPLQYSDFDFDAQFEKFYKNISSHFNNTFDPNQFNFSTVDVKEQLDTLTNVVKQLNESVIDLKQMNVYEQTIKWPWYVWLAMIAGIVGLVLAVVMLLCMTNCCSCFKGMCSCKQC--YYDELDDVYPAVRVHNKRTA >UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPDPYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDGLFVHTYMYLNQPSN-MYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTAASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVNNSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA---TDYPLHFFMSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSLREVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQVSDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPTYDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYALPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNTV-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGYTGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSVGYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTPSGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSLVTYDPTAANA-VQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKYLCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVRN-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYNKVKVTDPGFMQSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAVASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNALTNIQKGFDATNEALSKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIFSRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISECVKAQSLRNDFCGNGIHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGLCYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLNYSHVNYTVVNPSVPSDFDFEEEFNKWYKNHSSIFNNTFDPSAFNFSMVDVNKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLALAVVMLLCMTNCCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA >UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 -MLVILLMLPLVFA-RPSCVT--ISNLQYVDHNYTHRSFDMSAVSRVFPDPFVAYSGQTLKQSLYIADTSNTTVYPVTPPAVNGKPG-IYNLTILPVGDGFLVQTYMYKDQPSD-TYCQEPFGVAFGTTFEYDRIAIVTIVPGYKGSWSAVQKQTTTNVNILVCSNATLCAYPAFNRWGPAGTIYTTNDFVVYGDSCFINNTFTISINTSRLNLGFRFNDGNLYLYHSKWLPMQGLNLM---VDYPLHFLMSVGVGANLPNMQFYQAVVRQGTPPVTGADKNDANCLAFQNNLYLAYISKRDLLVSYDDNGLPIAVADCSQNAGDELYCVTGTFSPQVGVYPLSRYRALVSDYVQISQQGSICSLPYSDILKPPQPIVWKRHTVTNCSFDFDAIVNRLPTFQLKCFGVSPAKLAQMCYSSVTLDIFRANTTHLANMLGKVPDVFSKYNYALPPDFYGCVHSYYINDSSRMYAIAQQWPATVIAPGGRQPYNSYVGTVLNTP-NPTCTQLTCFGVVVISLKPASGKHLVCPSANDTDLVTRECVKYNLYGYTGTGVFN-ESSLVIPDSKLFVASSTGDIIAAKVRGKVYSITPCVSVPISVGYDPSFERALLFNGLSCSERSVAVSLPASDYWLAAVADNASTGVVTFDTLSGCVHNVRNATDITVPTCLMPLGNSLCLANITQPSQYGLSTTSSVNLLSLVTYDPTFQGG-VKVMSPVYWISIPTNFTLGAITEYIQTTSPKVNVDCVKYLCGDSERCTTVLLQYGTFCDDVNKALSEVSSIIDASMISLVSEITADVVRS-ENALFDTTYNFTGLLGCVGSNCNDRTTYRSALSDLLYNKVKVTDPGFMSSYQKCI-SQWGGDIRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAVASAGYTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKALVSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIFSRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVKSQALLAKQKISECVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTSYALVQTAAGLCLNNTGYAPRDGLFVLPNGSIYWQFTKMNFYNPVRLTNSNTQVLTTCSVNYTTVNYTVLPPTDNMDFNFTAEFEKWYKNHSSQFNNTFNPGDFNFSTVDIQNELNTLNAVVKQLNESFIDLKKLNVYEQTIKWPWYIWLAMIAGLVGLALAVVMLLCMTNCCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA >UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 -MLVILLILPLVHA-RPSCLT--VSPLQYLEHNISYVSLSVSKVTRLVPDPYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTS-IYNTSFVMVNDGLFVHTYMYLNQPSN-MYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTAASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVNNSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLA---TDYPLHFFMSVGVGANLPNAQFFQSVVRYN----RGVD--EARCHTFQNNLYIAPLSLREVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQVSDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPTYDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYALPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNTV-NNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGYTGTGVLS-PSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSVGYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTPSGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYAN----RATDSLPRLSLVTYDPTAANA-VQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKYLCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVRN-ENMQFDTTYNFTSLMGCLGSDCDSK-MYRSALSDLLYNKVKVTDPGFMQSYQKCI-SQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAVASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNALTNIQKGFDATNEALSKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIFSRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGLCYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLNYSHVNYTVVNPSVPSDFDFEEEFNKWYKNHSSIFNNTFDPSAFNFSMVDVNKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLALAVVMLLCMTNCCSCFKGMCSCKQC--HYDEVDDVYPAVRVYNKRTA >UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 -MLVILLMLPLVFA-RPSCVT--ISNLQYVDHNYTHRSFDMSAVSRVFPDPFVAYSGQTLKQSLYLADTSNTTVYPVTPPAVNGKPG-IYNLTILPVGDGFLVQTYMYKDQPSD-TYCQEPFGVAFGTTFEYDRIAIVTIVPGYKGSWSAVQKQTTTNVNILVCSNATLCAYPAFNRWGPAGTIYTTNDFVVYGDSCFINNTFTISINTSRLNLGFRFNDGNLYLYHSKWLPMQGLNLM---VDYPLHFLMSVGVGANLPNMQFYQAVVRQGTPPVTGAYKNDANCLAFQNNLYLAYISKRDLLVSYDDNGLPIAVADCSQNAGDELYCVTGTFSPQVGVYPLSRYRALVSDYVQISQQGSICSLPYSDILKPPQPIVWKRHTVTNCSFDFDAIVNRLPTFQLKCFGVSPAKLAQMCYSSVTLDIFRANTTHLANMLGKVPDVFSKYNYALPPDFYGCVHSYYINDTSPMYAIAQQWPATVIAPGGRQPYNSYVGTVLNTP-NPKCTQLTCFGVVVISLKPASGKHLVCPSANDTDLVTRECVKYNLYGYTGTGVFN-ESSLVIPDSKLFVASSTGDIIAAKVRGKVYSITPCVSVPISVGYDPSFERALLFNGLSCSERSVAVSLPASDYWVAAVADNASTGVVTFDTLSGCVHNVRNATDITVPTCLMPLGNSLCLANITQPSQYGLSTTSSVNLLSLVTYDPTFQGG-VKVMSPVYWISIPTNFTLGAITEYIQTTSPKVNVDCVKYLCGDSERCTTVLLQYGTFCDDVNKALSEVSSIIDASMISLVSEITADVVRS-ENALFDTTYNFTGLLGCVGSNCNDRTTYRSALSDLLYNKVKVTDPGFMSSYQKCI-SQWGGDIRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAVASAGYTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKALVSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIFSRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVKSQALLAKQKISECVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTSYALVQTAAGLCLNNTGYAPRDGLFVLPNGSIYWQFTKMNFYNPVRLTNSNTQVLTTCSVNYTTVNYTVLPPTDNMDFNFTAEFEKWYKNHSSQFNNTFNPGDFNFSTVDIQNELNTLNAVVKQLNESFIDLKKLNVYEQTIKWPWYIWLAMIAGLVGLALAVVMLLCMTNCCSCFKGMCACKPC--HYDEVEDVYPAVRVYNKRTA
Reading sequence file /data//pss_subsets/BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result/original_alignment/codeml/fasta/BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result.1
Found 10 sequences of length 3888
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 29.9%
Found 1885 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0% 10.3% 20.1% 29.3% 37.9% 46.0% 53.5% 60.5% 66.9% 72.7% 78.0% 82.7% 86.8% 90.4% 93.4% 95.8% 97.7% 99.0% 99.8%100.0%
Using a window size of 80 with k as 39
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 1466 polymorphic sites
**p-Value(s)**
----------
NSS: 0.00e+00 (1000 permutations)
Max Chi^2: 6.00e-01 (1000 permutations)
PHI (Permutation): 6.95e-01 (1000 permutations)
PHI (Normal): 7.08e-01
#NEXUS
[ID: 5454994194]
begin taxa;
dimensions ntax=10;
taxlabels
BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9
UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9
BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9
BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9
BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9
HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9
Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9
UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9
UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9
UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9
;
end;
begin trees;
translate
1 BF_005I_S_ABN10911_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9,
2 UNKNOWN_HM211101_S_ADM33582_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9,
3 BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9,
4 BF_141I_S_ABN10935_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9,
5 BF_493I_S_ABN10927_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9,
6 HKU9_1_BF_005I_S_YP_001039971_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9,
7 Rousettus_spp_Jinghong_2009_NA_AVP25406_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9,
8 UNKNOWN_HM211098_S_ADM33558_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9,
9 UNKNOWN_HM211099_S_ADM33566_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9,
10 UNKNOWN_HM211100_S_ADM33574_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:2.484637e-04,6:2.477299e-04,(((((2:7.962792e-03,9:5.398244e-03)1.000:3.454149e-01,3:3.596878e-01)1.000:3.624230e-01,(5:1.075180e-03,(8:5.667341e-04,10:2.235328e-04)0.570:5.287737e-04)1.000:4.199806e-01)1.000:2.400134e-01,4:8.669007e-01)1.000:3.744393e-01,7:6.173549e-01)1.000:7.235017e-01);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:2.484637e-04,6:2.477299e-04,(((((2:7.962792e-03,9:5.398244e-03):3.454149e-01,3:3.596878e-01):3.624230e-01,(5:1.075180e-03,(8:5.667341e-04,10:2.235328e-04):5.287737e-04):4.199806e-01):2.400134e-01,4:8.669007e-01):3.744393e-01,7:6.173549e-01):7.235017e-01);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -20701.75 -20713.96
2 -20701.82 -20722.02
--------------------------------------
TOTAL -20701.79 -20721.33
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 4.351685 0.067332 3.835003 4.836499 4.339161 778.42 894.24 1.000
r(A<->C){all} 0.166626 0.000196 0.139306 0.192657 0.166200 835.91 872.40 1.001
r(A<->G){all} 0.334126 0.000333 0.298735 0.369340 0.333721 773.66 838.56 1.000
r(A<->T){all} 0.078489 0.000064 0.062328 0.093564 0.078183 888.21 966.51 1.001
r(C<->G){all} 0.100552 0.000154 0.076730 0.124932 0.100295 657.25 839.55 1.001
r(C<->T){all} 0.276275 0.000226 0.245061 0.303867 0.276503 823.92 837.46 1.000
r(G<->T){all} 0.043932 0.000047 0.030579 0.057025 0.043835 724.80 872.56 1.000
pi(A){all} 0.251961 0.000025 0.242275 0.261888 0.252037 610.68 842.07 1.000
pi(C){all} 0.175650 0.000018 0.167479 0.184059 0.175513 690.30 692.47 1.002
pi(G){all} 0.209884 0.000025 0.200788 0.219949 0.209854 770.11 825.26 1.000
pi(T){all} 0.362504 0.000033 0.351225 0.372841 0.362480 680.71 798.17 1.000
alpha{1,2} 0.214078 0.000175 0.188256 0.238779 0.213727 839.88 962.74 1.001
alpha{3} 4.470815 1.597938 2.338717 6.853983 4.232755 1103.30 1142.42 1.001
pinvar{all} 0.041776 0.000186 0.014794 0.067195 0.041903 1025.50 1081.60 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/BF_017I_S_ABN10919_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 10 ls = 1252
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 55 57 51 48 55 49 | Ser TCT 43 32 35 28 43 36 | Tyr TAT 43 50 43 54 43 48 | Cys TGT 29 29 27 28 29 28
TTC 9 8 16 6 9 10 | TCC 6 8 5 8 6 10 | TAC 17 17 19 16 17 19 | TGC 10 11 13 12 10 11
Leu TTA 30 32 25 35 30 30 | TCA 10 17 23 24 10 16 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 32 31 28 35 32 31 | TCG 9 9 7 6 9 5 | TAG 0 0 0 0 0 0 | Trp TGG 12 13 14 13 12 12
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 26 20 25 23 26 26 | Pro CCT 45 28 29 35 45 32 | His CAT 16 13 12 16 16 16 | Arg CGT 18 11 20 12 18 17
CTC 6 6 6 5 6 5 | CCC 2 10 4 7 2 5 | CAC 4 2 3 4 4 3 | CGC 7 7 6 4 7 5
CTA 14 15 16 8 14 14 | CCA 12 18 21 12 12 16 | Gln CAA 19 20 31 18 19 28 | CGA 2 2 3 3 2 1
CTG 7 11 15 10 7 17 | CCG 8 6 5 10 8 7 | CAG 28 30 26 37 28 36 | CGG 2 3 1 2 2 3
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 43 30 38 31 43 32 | Thr ACT 50 45 49 36 50 40 | Asn AAT 80 65 74 74 80 67 | Ser AGT 31 37 23 25 31 22
ATC 7 3 10 1 7 3 | ACC 10 12 14 15 10 13 | AAC 16 26 18 21 16 27 | AGC 9 6 9 9 9 6
ATA 18 24 28 25 18 30 | ACA 22 22 24 26 22 28 | Lys AAA 13 14 11 13 13 18 | Arg AGA 4 10 9 7 4 7
Met ATG 27 24 16 25 27 21 | ACG 13 22 10 13 13 15 | AAG 17 21 22 24 17 16 | AGG 13 8 3 8 13 9
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 49 61 51 49 49 54 | Ala GCT 39 37 48 43 39 52 | Asp GAT 38 27 30 38 38 39 | Gly GGT 53 47 44 40 53 48
GTC 9 11 14 14 9 14 | GCC 13 12 10 14 13 10 | GAC 18 24 24 19 18 17 | GGC 15 17 19 23 15 17
GTA 25 25 21 27 25 14 | GCA 23 21 28 19 23 20 | Glu GAA 11 12 19 13 11 15 | GGA 1 7 5 5 1 2
GTG 23 27 23 36 23 31 | GCG 21 11 9 21 21 10 | GAG 14 19 15 14 14 15 | GGG 6 9 5 5 6 4
--------------------------------------------------------------------------------------------------------------------------------------
------------------------------------------------------------------------------------------------------
Phe TTT 48 50 48 50 | Ser TCT 28 32 28 33 | Tyr TAT 54 46 54 49 | Cys TGT 28 31 28 32
TTC 6 11 6 11 | TCC 8 12 8 11 | TAC 16 20 16 18 | TGC 12 9 12 8
Leu TTA 35 31 35 29 | TCA 24 15 24 15 | *** TAA 0 0 0 0 | *** TGA 0 0 0 0
TTG 35 35 35 35 | TCG 6 10 6 10 | TAG 0 0 0 0 | Trp TGG 13 13 13 13
------------------------------------------------------------------------------------------------------
Leu CTT 24 25 24 25 | Pro CCT 35 30 35 27 | His CAT 16 9 16 9 | Arg CGT 12 10 12 10
CTC 5 4 5 4 | CCC 7 10 7 12 | CAC 4 5 4 5 | CGC 4 6 4 5
CTA 8 14 8 16 | CCA 12 20 12 22 | Gln CAA 18 20 18 20 | CGA 3 2 3 2
CTG 10 10 10 10 | CCG 10 5 10 5 | CAG 37 39 37 39 | CGG 2 3 2 3
------------------------------------------------------------------------------------------------------
Ile ATT 30 31 30 30 | Thr ACT 36 47 36 49 | Asn AAT 74 63 74 64 | Ser AGT 25 26 25 29
ATC 1 4 1 5 | ACC 14 9 14 9 | AAC 21 26 21 25 | AGC 10 11 10 7
ATA 26 26 25 25 | ACA 24 27 25 26 | Lys AAA 13 23 13 23 | Arg AGA 7 10 7 10
Met ATG 25 24 25 24 | ACG 14 13 14 12 | AAG 24 21 24 22 | AGG 8 4 8 4
------------------------------------------------------------------------------------------------------
Val GTT 49 59 49 62 | Ala GCT 43 35 43 34 | Asp GAT 38 40 38 39 | Gly GGT 40 49 40 48
GTC 14 10 14 8 | GCC 14 11 14 12 | GAC 19 20 19 20 | GGC 23 14 23 15
GTA 27 25 27 26 | GCA 19 26 19 26 | Glu GAA 13 11 13 12 | GGA 5 5 5 5
GTG 36 25 36 24 | GCG 21 7 21 7 | GAG 14 14 14 13 | GGG 5 9 5 9
------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C1
position 1: T:0.24361 C:0.17252 A:0.29792 G:0.28594
position 2: T:0.30351 C:0.26038 A:0.26677 G:0.16933
position 3: T:0.52556 C:0.12620 A:0.16294 G:0.18530
Average T:0.35756 C:0.18637 A:0.24255 G:0.21353
#2: C2
position 1: T:0.25080 C:0.16134 A:0.29473 G:0.29313
position 2: T:0.30751 C:0.24760 A:0.27157 G:0.17332
position 3: T:0.47045 C:0.14377 A:0.19089 G:0.19489
Average T:0.34292 C:0.18424 A:0.25240 G:0.22045
#3: C3
position 1: T:0.24441 C:0.17812 A:0.28594 G:0.29153
position 2: T:0.30591 C:0.25639 A:0.27716 G:0.16054
position 3: T:0.47843 C:0.15176 A:0.21086 G:0.15895
Average T:0.34292 C:0.19542 A:0.25799 G:0.20367
#4: C4
position 1: T:0.25000 C:0.16454 A:0.28195 G:0.30351
position 2: T:0.30192 C:0.25319 A:0.28834 G:0.15655
position 3: T:0.46326 C:0.14217 A:0.18770 G:0.20687
Average T:0.33839 C:0.18663 A:0.25266 G:0.22231
#5: C5
position 1: T:0.24361 C:0.17252 A:0.29792 G:0.28594
position 2: T:0.30351 C:0.26038 A:0.26677 G:0.16933
position 3: T:0.52556 C:0.12620 A:0.16294 G:0.18530
Average T:0.35756 C:0.18637 A:0.24255 G:0.21353
#6: C6
position 1: T:0.24361 C:0.18450 A:0.28275 G:0.28914
position 2: T:0.30431 C:0.25160 A:0.29073 G:0.15335
position 3: T:0.48403 C:0.13978 A:0.19089 G:0.18530
Average T:0.34398 C:0.19196 A:0.25479 G:0.20927
#7: C7
position 1: T:0.25000 C:0.16534 A:0.28115 G:0.30351
position 2: T:0.30272 C:0.25160 A:0.28834 G:0.15735
position 3: T:0.46326 C:0.14217 A:0.18690 G:0.20767
Average T:0.33866 C:0.18637 A:0.25213 G:0.22284
#8: C8
position 1: T:0.25160 C:0.16933 A:0.29153 G:0.28754
position 2: T:0.30671 C:0.24681 A:0.28514 G:0.16134
position 3: T:0.46565 C:0.14537 A:0.20367 G:0.18530
Average T:0.34132 C:0.18717 A:0.26012 G:0.21140
#9: C9
position 1: T:0.25000 C:0.16534 A:0.28115 G:0.30351
position 2: T:0.30192 C:0.25240 A:0.28834 G:0.15735
position 3: T:0.46326 C:0.14217 A:0.18690 G:0.20767
Average T:0.33839 C:0.18663 A:0.25213 G:0.22284
#10: C10
position 1: T:0.25080 C:0.17093 A:0.29073 G:0.28754
position 2: T:0.30671 C:0.24760 A:0.28594 G:0.15974
position 3: T:0.47125 C:0.13978 A:0.20527 G:0.18371
Average T:0.34292 C:0.18610 A:0.26065 G:0.21033
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 511 | Ser S TCT 338 | Tyr Y TAT 484 | Cys C TGT 289
TTC 92 | TCC 82 | TAC 175 | TGC 108
Leu L TTA 312 | TCA 178 | *** * TAA 0 | *** * TGA 0
TTG 329 | TCG 77 | TAG 0 | Trp W TGG 128
------------------------------------------------------------------------------
Leu L CTT 244 | Pro P CCT 341 | His H CAT 139 | Arg R CGT 140
CTC 52 | CCC 66 | CAC 38 | CGC 55
CTA 127 | CCA 157 | Gln Q CAA 211 | CGA 23
CTG 107 | CCG 74 | CAG 337 | CGG 23
------------------------------------------------------------------------------
Ile I ATT 338 | Thr T ACT 438 | Asn N AAT 715 | Ser S AGT 274
ATC 42 | ACC 120 | AAC 217 | AGC 86
ATA 245 | ACA 246 | Lys K AAA 154 | Arg R AGA 75
Met M ATG 238 | ACG 139 | AAG 208 | AGG 78
------------------------------------------------------------------------------
Val V GTT 532 | Ala A GCT 413 | Asp D GAT 365 | Gly G GGT 462
GTC 117 | GCC 123 | GAC 198 | GGC 181
GTA 242 | GCA 224 | Glu E GAA 130 | GGA 41
GTG 284 | GCG 149 | GAG 146 | GGG 63
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.24784 C:0.17045 A:0.28858 G:0.29313
position 2: T:0.30447 C:0.25280 A:0.28091 G:0.16182
position 3: T:0.48107 C:0.13994 A:0.18890 G:0.19010
Average T:0.34446 C:0.18773 A:0.25280 G:0.21502
Model 1: NearlyNeutral (2 categories)
TREE # 1: (1, 5, (((((10, 8), 2), (4, (7, 9))), 3), 6)); MP score: 3291
lnL(ntime: 17 np: 20): -19228.704470 +0.000000
11..1 11..5 11..12 12..13 13..14 14..15 15..16 16..10 16..8 15..2 14..17 17..4 17..18 18..7 18..9 13..3 12..6
0.000004 0.000004 2.308680 1.455167 1.138372 1.128824 0.824746 0.022605 0.008255 0.651357 0.956197 0.002480 0.000004 0.000828 0.000004 2.548533 1.710710 1.744369 0.841718 0.032536
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 12.756770
(1: 0.000004, 5: 0.000004, (((((10: 0.022605, 8: 0.008255): 0.824746, 2: 0.651357): 1.128824, (4: 0.002480, (7: 0.000828, 9: 0.000004): 0.000004): 0.956197): 1.138372, 3: 2.548533): 1.455167, 6: 1.710710): 2.308680);
(C1: 0.000004, C5: 0.000004, (((((C10: 0.022605, C8: 0.008255): 0.824746, C2: 0.651357): 1.128824, (C4: 0.002480, (C7: 0.000828, C9: 0.000004): 0.000004): 0.956197): 1.138372, C3: 2.548533): 1.455167, C6: 1.710710): 2.308680);
Detailed output identifying parameters
kappa (ts/tv) = 1.74437
MLEs of dN/dS (w) for site classes (K=2)
p: 0.84172 0.15828
w: 0.03254 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
11..1 0.000 3018.5 737.5 0.1857 0.0000 0.0000 0.0 0.0
11..5 0.000 3018.5 737.5 0.1857 0.0000 0.0000 0.0 0.0
11..12 2.309 3018.5 737.5 0.1857 0.4135 2.2269 1248.1 1642.4
12..13 1.455 3018.5 737.5 0.1857 0.2606 1.4036 786.7 1035.2
13..14 1.138 3018.5 737.5 0.1857 0.2039 1.0981 615.4 809.8
14..15 1.129 3018.5 737.5 0.1857 0.2022 1.0889 610.2 803.0
15..16 0.825 3018.5 737.5 0.1857 0.1477 0.7955 445.9 586.7
16..10 0.023 3018.5 737.5 0.1857 0.0040 0.0218 12.2 16.1
16..8 0.008 3018.5 737.5 0.1857 0.0015 0.0080 4.5 5.9
15..2 0.651 3018.5 737.5 0.1857 0.1167 0.6283 352.1 463.4
14..17 0.956 3018.5 737.5 0.1857 0.1713 0.9223 516.9 680.2
17..4 0.002 3018.5 737.5 0.1857 0.0004 0.0024 1.3 1.8
17..18 0.000 3018.5 737.5 0.1857 0.0000 0.0000 0.0 0.0
18..7 0.001 3018.5 737.5 0.1857 0.0001 0.0008 0.4 0.6
18..9 0.000 3018.5 737.5 0.1857 0.0000 0.0000 0.0 0.0
13..3 2.549 3018.5 737.5 0.1857 0.4564 2.4583 1377.7 1813.0
12..6 1.711 3018.5 737.5 0.1857 0.3064 1.6501 924.8 1217.0
Time used: 3:27
Model 2: PositiveSelection (3 categories)
TREE # 1: (1, 5, (((((10, 8), 2), (4, (7, 9))), 3), 6)); MP score: 3291
lnL(ntime: 17 np: 22): -19228.704470 +0.000000
11..1 11..5 11..12 12..13 13..14 14..15 15..16 16..10 16..8 15..2 14..17 17..4 17..18 18..7 18..9 13..3 12..6
0.000004 0.000004 2.308675 1.455156 1.138357 1.128822 0.824746 0.022605 0.008256 0.651355 0.956184 0.002480 0.000004 0.000828 0.000004 2.548499 1.710696 1.744372 0.841717 0.082342 0.032537 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 12.756675
(1: 0.000004, 5: 0.000004, (((((10: 0.022605, 8: 0.008256): 0.824746, 2: 0.651355): 1.128822, (4: 0.002480, (7: 0.000828, 9: 0.000004): 0.000004): 0.956184): 1.138357, 3: 2.548499): 1.455156, 6: 1.710696): 2.308675);
(C1: 0.000004, C5: 0.000004, (((((C10: 0.022605, C8: 0.008256): 0.824746, C2: 0.651355): 1.128822, (C4: 0.002480, (C7: 0.000828, C9: 0.000004): 0.000004): 0.956184): 1.138357, C3: 2.548499): 1.455156, C6: 1.710696): 2.308675);
Detailed output identifying parameters
kappa (ts/tv) = 1.74437
MLEs of dN/dS (w) for site classes (K=3)
p: 0.84172 0.08234 0.07594
w: 0.03254 1.00000 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
11..1 0.000 3018.5 737.5 0.1857 0.0000 0.0000 0.0 0.0
11..5 0.000 3018.5 737.5 0.1857 0.0000 0.0000 0.0 0.0
11..12 2.309 3018.5 737.5 0.1857 0.4135 2.2269 1248.1 1642.4
12..13 1.455 3018.5 737.5 0.1857 0.2606 1.4036 786.7 1035.2
13..14 1.138 3018.5 737.5 0.1857 0.2039 1.0981 615.4 809.8
14..15 1.129 3018.5 737.5 0.1857 0.2022 1.0889 610.2 803.0
15..16 0.825 3018.5 737.5 0.1857 0.1477 0.7955 445.9 586.7
16..10 0.023 3018.5 737.5 0.1857 0.0040 0.0218 12.2 16.1
16..8 0.008 3018.5 737.5 0.1857 0.0015 0.0080 4.5 5.9
15..2 0.651 3018.5 737.5 0.1857 0.1167 0.6283 352.1 463.4
14..17 0.956 3018.5 737.5 0.1857 0.1712 0.9223 516.9 680.2
17..4 0.002 3018.5 737.5 0.1857 0.0004 0.0024 1.3 1.8
17..18 0.000 3018.5 737.5 0.1857 0.0000 0.0000 0.0 0.0
18..7 0.001 3018.5 737.5 0.1857 0.0001 0.0008 0.4 0.6
18..9 0.000 3018.5 737.5 0.1857 0.0000 0.0000 0.0 0.0
13..3 2.548 3018.5 737.5 0.1857 0.4564 2.4583 1377.7 1813.0
12..6 1.711 3018.5 737.5 0.1857 0.3064 1.6501 924.8 1217.0
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
284 N 0.524 1.283 +- 0.344
453 P 0.619 1.352 +- 0.415
610 S 0.501 1.254 +- 0.445
655 I 0.511 1.277 +- 0.345
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.960 0.026 0.008 0.003 0.001 0.001 0.000 0.000 0.000 0.000
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.313
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.687 0.000
sum of density on p0-p1 = 1.000000
Time used: 7:16
Model 7: beta (10 categories)
TREE # 1: (1, 5, (((((10, 8), 2), (4, (7, 9))), 3), 6)); MP score: 3291
check convergence..
lnL(ntime: 17 np: 20): -18952.545629 +0.000000
11..1 11..5 11..12 12..13 13..14 14..15 15..16 16..10 16..8 15..2 14..17 17..4 17..18 18..7 18..9 13..3 12..6
0.000004 0.000004 2.930572 1.793716 1.378850 1.536891 1.002575 0.024928 0.006081 0.719510 1.327228 0.002454 0.000004 0.000820 0.000004 3.382093 2.115626 1.535685 0.314238 5.512113
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 16.221359
(1: 0.000004, 5: 0.000004, (((((10: 0.024928, 8: 0.006081): 1.002575, 2: 0.719510): 1.536891, (4: 0.002454, (7: 0.000820, 9: 0.000004): 0.000004): 1.327228): 1.378850, 3: 3.382093): 1.793716, 6: 2.115626): 2.930572);
(C1: 0.000004, C5: 0.000004, (((((C10: 0.024928, C8: 0.006081): 1.002575, C2: 0.719510): 1.536891, (C4: 0.002454, (C7: 0.000820, C9: 0.000004): 0.000004): 1.327228): 1.378850, C3: 3.382093): 1.793716, C6: 2.115626): 2.930572);
Detailed output identifying parameters
kappa (ts/tv) = 1.53569
Parameters in M7 (beta):
p = 0.31424 q = 5.51211
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00001 0.00032 0.00166 0.00489 0.01112 0.02184 0.03941 0.06828 0.11930 0.23902
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
11..1 0.000 3030.2 725.8 0.0506 0.0000 0.0000 0.0 0.0
11..5 0.000 3030.2 725.8 0.0506 0.0000 0.0000 0.0 0.0
11..12 2.931 3030.2 725.8 0.0506 0.2111 4.1736 639.7 3029.3
12..13 1.794 3030.2 725.8 0.0506 0.1292 2.5545 391.6 1854.2
13..14 1.379 3030.2 725.8 0.0506 0.0993 1.9637 301.0 1425.3
14..15 1.537 3030.2 725.8 0.0506 0.1107 2.1888 335.5 1588.7
15..16 1.003 3030.2 725.8 0.0506 0.0722 1.4278 218.9 1036.4
16..10 0.025 3030.2 725.8 0.0506 0.0018 0.0355 5.4 25.8
16..8 0.006 3030.2 725.8 0.0506 0.0004 0.0087 1.3 6.3
15..2 0.720 3030.2 725.8 0.0506 0.0518 1.0247 157.1 743.8
14..17 1.327 3030.2 725.8 0.0506 0.0956 1.8902 289.7 1372.0
17..4 0.002 3030.2 725.8 0.0506 0.0002 0.0035 0.5 2.5
17..18 0.000 3030.2 725.8 0.0506 0.0000 0.0000 0.0 0.0
18..7 0.001 3030.2 725.8 0.0506 0.0001 0.0012 0.2 0.8
18..9 0.000 3030.2 725.8 0.0506 0.0000 0.0000 0.0 0.0
13..3 3.382 3030.2 725.8 0.0506 0.2437 4.8166 738.3 3496.1
12..6 2.116 3030.2 725.8 0.0506 0.1524 3.0130 461.8 2186.9
Time used: 19:33
Model 8: beta&w>1 (11 categories)
TREE # 1: (1, 5, (((((10, 8), 2), (4, (7, 9))), 3), 6)); MP score: 3291
lnL(ntime: 17 np: 22): -18942.994265 +0.000000
11..1 11..5 11..12 12..13 13..14 14..15 15..16 16..10 16..8 15..2 14..17 17..4 17..18 18..7 18..9 13..3 12..6
0.000004 0.000004 3.559829 2.210547 1.726853 1.891019 1.096232 0.024042 0.007263 0.739611 1.573243 0.002462 0.000004 0.000822 0.000004 4.110036 2.607865 1.557353 0.966280 0.356580 8.925625 1.310002
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 19.549841
(1: 0.000004, 5: 0.000004, (((((10: 0.024042, 8: 0.007263): 1.096232, 2: 0.739611): 1.891019, (4: 0.002462, (7: 0.000822, 9: 0.000004): 0.000004): 1.573243): 1.726853, 3: 4.110036): 2.210547, 6: 2.607865): 3.559829);
(C1: 0.000004, C5: 0.000004, (((((C10: 0.024042, C8: 0.007263): 1.096232, C2: 0.739611): 1.891019, (C4: 0.002462, (C7: 0.000822, C9: 0.000004): 0.000004): 1.573243): 1.726853, C3: 4.110036): 2.210547, C6: 2.607865): 3.559829);
Detailed output identifying parameters
kappa (ts/tv) = 1.55735
Parameters in M8 (beta&w>1):
p0 = 0.96628 p = 0.35658 q = 8.92563
(p1 = 0.03372) w = 1.31000
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09663 0.09663 0.09663 0.09663 0.09663 0.09663 0.09663 0.09663 0.09663 0.09663 0.03372
w: 0.00002 0.00041 0.00174 0.00454 0.00944 0.01734 0.02967 0.04928 0.08332 0.16381 1.31000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
11..1 0.000 3028.9 727.1 0.0789 0.0000 0.0000 0.0 0.0
11..5 0.000 3028.9 727.1 0.0789 0.0000 0.0000 0.0 0.0
11..12 3.560 3028.9 727.1 0.0789 0.3641 4.6131 1102.7 3354.2
12..13 2.211 3028.9 727.1 0.0789 0.2261 2.8646 684.7 2082.9
13..14 1.727 3028.9 727.1 0.0789 0.1766 2.2378 534.9 1627.1
14..15 1.891 3028.9 727.1 0.0789 0.1934 2.4505 585.8 1781.8
15..16 1.096 3028.9 727.1 0.0789 0.1121 1.4206 339.6 1032.9
16..10 0.024 3028.9 727.1 0.0789 0.0025 0.0312 7.4 22.7
16..8 0.007 3028.9 727.1 0.0789 0.0007 0.0094 2.2 6.8
15..2 0.740 3028.9 727.1 0.0789 0.0756 0.9584 229.1 696.9
14..17 1.573 3028.9 727.1 0.0789 0.1609 2.0387 487.3 1482.4
17..4 0.002 3028.9 727.1 0.0789 0.0003 0.0032 0.8 2.3
17..18 0.000 3028.9 727.1 0.0789 0.0000 0.0000 0.0 0.0
18..7 0.001 3028.9 727.1 0.0789 0.0001 0.0011 0.3 0.8
18..9 0.000 3028.9 727.1 0.0789 0.0000 0.0000 0.0 0.0
13..3 4.110 3028.9 727.1 0.0789 0.4203 5.3261 1273.1 3872.7
12..6 2.608 3028.9 727.1 0.0789 0.2667 3.3795 807.8 2457.2
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
21 F 0.888 1.181
24 T 0.594 0.839
33 T 0.504 0.728
36 K 0.589 0.836
108 S 0.685 0.944
139 L 0.552 0.793
146 A 0.550 0.786
228 S 0.796 1.074
284 N 0.902 1.196
305 D 0.764 1.037
348 T 0.812 1.093
423 R 0.771 1.046
453 P 0.980* 1.286
484 S 0.592 0.833
487 S 0.761 1.034
551 S 0.718 0.984
582 N 0.522 0.754
595 S 0.672 0.931
607 V 0.819 1.101
610 S 0.573 0.805
655 I 0.942 1.243
656 A 0.784 1.060
672 D 0.830 1.113
768 S 0.666 0.922
788 A 0.530 0.765
1068 R 0.615 0.862
1120 S 0.875 1.166
1123 G 0.672 0.928
1141 I 0.835 1.120
1160 A 0.740 1.010
1163 K 0.617 0.864
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
21 F 0.576 1.300 +- 0.865
108 S 0.520 1.191 +- 0.910
228 S 0.597 1.320 +- 0.902
284 N 0.644 1.408 +- 0.878
305 D 0.503 1.184 +- 0.889
348 T 0.576 1.297 +- 0.902
423 R 0.549 1.246 +- 0.892
453 P 0.880 1.774 +- 0.810
484 S 0.587 1.307 +- 1.006
487 S 0.561 1.267 +- 0.909
551 S 0.522 1.205 +- 0.905
607 V 0.562 1.266 +- 0.877
610 S 0.607 1.311 +- 1.046
655 I 0.665 1.446 +- 0.876
656 A 0.565 1.277 +- 0.906
672 D 0.618 1.362 +- 0.903
768 S 0.506 1.167 +- 0.912
1120 S 0.528 1.227 +- 0.865
1141 I 0.559 1.274 +- 0.886
1160 A 0.514 1.190 +- 0.889
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.999
ws: 0.683 0.242 0.058 0.013 0.003 0.001 0.000 0.000 0.000 0.000
Time used: 45:23
Model 1: NearlyNeutral -19228.704470
Model 2: PositiveSelection -19228.704470
Model 7: beta -18952.545629
Model 8: beta&w>1 -18942.994265
Model 2 vs 1 0
Model 8 vs 7 19.102728
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
21 F 0.888 1.181
24 T 0.594 0.839
33 T 0.504 0.728
36 K 0.589 0.836
108 S 0.685 0.944
139 L 0.552 0.793
146 A 0.550 0.786
228 S 0.796 1.074
284 N 0.902 1.196
305 D 0.764 1.037
348 T 0.812 1.093
423 R 0.771 1.046
453 P 0.980* 1.286
484 S 0.592 0.833
487 S 0.761 1.034
551 S 0.718 0.984
582 N 0.522 0.754
595 S 0.672 0.931
607 V 0.819 1.101
610 S 0.573 0.805
655 I 0.942 1.243
656 A 0.784 1.060
672 D 0.830 1.113
768 S 0.666 0.922
788 A 0.530 0.765
1068 R 0.615 0.862
1120 S 0.875 1.166
1123 G 0.672 0.928
1141 I 0.835 1.120
1160 A 0.740 1.010
1163 K 0.617 0.864
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
21 F 0.576 1.300 +- 0.865
108 S 0.520 1.191 +- 0.910
228 S 0.597 1.320 +- 0.902
284 N 0.644 1.408 +- 0.878
305 D 0.503 1.184 +- 0.889
348 T 0.576 1.297 +- 0.902
423 R 0.549 1.246 +- 0.892
453 P 0.880 1.774 +- 0.810
484 S 0.587 1.307 +- 1.006
487 S 0.561 1.267 +- 0.909
551 S 0.522 1.205 +- 0.905
607 V 0.562 1.266 +- 0.877
610 S 0.607 1.311 +- 1.046
655 I 0.665 1.446 +- 0.876
656 A 0.565 1.277 +- 0.906
672 D 0.618 1.362 +- 0.903
768 S 0.506 1.167 +- 0.912
1120 S 0.528 1.227 +- 0.865
1141 I 0.559 1.274 +- 0.886
1160 A 0.514 1.190 +- 0.889
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
