--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -6276.35 -6296.38
2 -6276.34 -6293.30
--------------------------------------
TOTAL -6276.35 -6295.73
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 2.089780 0.020731 1.818225 2.367343 2.081064 1340.58 1397.75 1.000
r(A<->C){all} 0.109987 0.000278 0.078242 0.142996 0.109670 1061.54 1077.18 1.001
r(A<->G){all} 0.261211 0.000563 0.215310 0.307031 0.260457 553.14 640.48 1.000
r(A<->T){all} 0.127603 0.000272 0.096125 0.160983 0.127066 974.31 1029.25 1.000
r(C<->G){all} 0.030848 0.000099 0.011941 0.049527 0.030379 787.44 802.93 1.000
r(C<->T){all} 0.407937 0.000818 0.352708 0.465509 0.407018 654.65 756.02 1.000
r(G<->T){all} 0.062415 0.000142 0.039242 0.085816 0.061586 1109.19 1170.41 1.000
pi(A){all} 0.280376 0.000095 0.261933 0.299204 0.280218 871.60 923.05 1.000
pi(C){all} 0.219858 0.000088 0.201613 0.237612 0.219788 899.59 935.53 1.000
pi(G){all} 0.259661 0.000101 0.239477 0.278902 0.259617 878.38 962.41 1.000
pi(T){all} 0.240105 0.000082 0.221939 0.257565 0.239993 1023.54 1137.57 1.000
alpha{1,2} 0.174700 0.000222 0.146737 0.204389 0.173718 1265.72 1343.29 1.000
alpha{3} 4.160105 1.660198 2.145937 6.819313 3.950485 1406.72 1453.86 1.000
pinvar{all} 0.167023 0.001074 0.101724 0.230538 0.167677 1269.25 1346.79 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -5851.222331
Model 2: PositiveSelection -5851.222331
Model 7: beta -5823.239093
Model 8: beta&w>1 -5821.611514
Model 2 vs 1 0
Model 8 vs 7 3.255158
-- Starting log on Wed Oct 26 00:49:05 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.06 sec, SCORE=1000, Nseq=10, Len=470
C1 MSGRNRSRSGTPSPKVTFKQESDGSDSESERRNGNRNGARPKNNNSRGSA
C2 MSGRNKPRPGNQSPKVTFKQESDGSDSESERRNGNRNGARPKNNNNRGFG
C3 MSGRNKPRPGSQSPKVTFKQESDGSDSESERRNGNRSGARPKNNNNRGGN
C4 MSGRNKPRPTSQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGA
C5 MSGRNRSRSGTPSPKVTFKQESDGSDSESERRNGNRNGARPKNNNSRGSA
C6 MSGRNKPRPTSQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGA
C7 MSGRNKPRPSNQ-AKVTFKQESDNSDSESERRNGNRSGARPKNNNNRGAN
C8 MSGRNKPRPGSQSPKVTFKQESDGSDSESERRNGNRNGARPKNNNGRGAG
C9 MSGRNKPRLIFQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGA
C10 MSGRNKPRPSNQ-PKVTFKQESDGSDSESERRNGNRNGARPKTNNNRGAG
*****:.* .*********.************.***.*.**.**
C1 PKPEKPKAAPPQNVSWFAPLVQTGKAELRFPRGEGVPVSQGVDSTYEHGY
C2 SKPEKPKAAPPQNVSWYAPLVQTGKADLRFPRGEGVPISQGVDPIYQHGY
C3 SKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGEGVPISQGVDPVYLHGY
C4 PKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGY
C5 PKPEKPKAAPPQNVSWFAPLVQTGKAELRFPRGEGVPVSQGVDSTYEHGY
C6 PKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGY
C7 PKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGEGVPISQGVDLNYLHGY
C8 SKPEKPKAAPPQNVSWYAPLVQTGKNDLRFPRGQGVPISQGIDDIYNHGY
C9 PKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGY
C10 SKPEKPKAAPPQNVSWYAPLVQTGKADLRFPRGEGVPISQGVDPIYQHGY
.***************:******** :******:***:***:* * ***
C1 WLRTQRSFQKGGKQVLANPRWYFYYTGTGRFGDLRFGTKNPDIVWVGQEG
C2 WTRTQRSFQKGGKTVQANPRWYFYYTGTGRYADLRWGQKNPDIVWVGEEG
C3 WVRTQRNFQKGGKTVQANPRWYFYYTGTGRHADLRWGQKNPDLIWVGEDG
C4 WVRTQRTFQKGGKPVSANPRWYFYYTGTGRYGDMRYGTKNPDIYWVGEEG
C5 WLRTQRSFQKGGKQVLANPRWYFYYTGTGRFGDLRFGTKNPDIVWVGQEG
C6 WVRTQRTFQKGGKPVSANPRWYFYYTGTGRYGDMRYGTKNPDIYWVGEEG
C7 WVRTQRSYQKGGKTVQANARWYFYYTGTGRFGDLRWGQKNPEIIWVGEEG
C8 WVRTQRNFQKGGKQVAANPRWYFYYTGTGRYADLRYGSKNPDIIWVGAEG
C9 WVRTQRTFQKGGKPVSANPRWYFYYTGTGRYGDMRYGTKNPDIYWVGEEG
C10 WTRTQRSFQKGGKTVQANPRWYFYYTGTGRYADLRWGQKNPDIVWVGEEG
* ****.:***** * **.***********..*:*:* ***:: *** :*
C1 ANINRLGDMGTRNPSNDGAIPVQLAGGIPKGFYAEGRGSRGNSRSSSRNS
C2 ANINRVGDMGTRNPNNDAAIAVQLGNGIPKGFYAEGRGSRGNSRNSSRNS
C3 ANINRIGDMGTRNPNNDSAIPVQFGSGIPKGFYAEGRNSRGNSRNSSRNS
C4 ANVNRVGDMGTRNPNNDAAISVQLADGIPKGFYAEGRNSRGNSRNSSRNS
C5 ANINRLGDMGTRNPSNDGAIPVQLAGGIPKGFYAEGRGSRGNSRSSSRNS
C6 ANVNRVGDMGTRNPNNDAAISVQLADGIPKGFYAEGRNSRGNSRNSSRNS
C7 ANVNRVGDMGTRNPNNDAAIPVQLSGGIPKGFYAEGRNSRGNSRNGSRNS
C8 ANINRVGDIGTRNPSNDAAIPVQLADGIPKGFYAEGRNSRGNSRNNSRSS
C9 ANVNRVGDMGTRNPNNDAAISVQLADGIPKGFYAEGRNSRGNSRNSSRNS
C10 ANINRVGDMGTRNPNNDAAIAVQLGNGIPKGFYAEGRGSRGNSRNSSRNS
**:**:**:*****.**.**.**:..***********.******..**.*
C1 SRASSRGNSRASSRGASPGR--PAANPSTEPWMAYLVQKLERLESQVSGT
C2 SRASSRSSSRPNSRGASPGRNTPNPGAGSEPWMAYLVSKLENLEAKVNGT
C3 SRASTRGNSRANSRGASPGRNTPSGGSNSEPWMAYLVQKLEALETKVNGN
C4 SRASSRGGSRPGSRGASPGRATPS-GSGAEPWMAYLVSKLETLEAKVNGT
C5 SRASSRGNSRASSRGASPGR--PAANPSTEPWMAYLVQKLERLESQVSGT
C6 SRASSRGGSRPGSRGASPGRATPS-GSGVEPWMAYLVSKLETLEAKVNGT
C7 SRASSRGSSRASSRGASPGRNTPSGGSNSEPWMAYLVQKLEALETKVNGN
C8 SRASSRGSSRASSRGPSPGRATPS-GGNSEPWMAYLVQKLEALETKVNGN
C9 SRASSRGGSRPGSRGASPGRATPS-GSGAEPWMAYLVSKLETLEAKVNGT
C10 SRASSRSSSRPNSRGASPGRNTPNPGSGSEPWMAYLVSKLENLEAKVNGT
****:*..**..***.**** * . . ********.*** **::*.*.
C1 KPATKNPVQVTKNEAAANAKKLRHKRTAHKGSGVTVNYGRRGPGDLEGNF
C2 KPETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNF
C3 KSETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTANFGRRGPGELEGNF
C4 KSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNF
C5 KPATKNPVQVTKNEAAANAKKLRHKRTAHKGSGVTVNYGRRGPGDLEGNF
C6 KSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNF
C7 KSETKTPVQVSKNAAAENAKRLRHKRTPHKGSGVTVNYGRRGPGDWEGNL
C8 KPATKAPVQVSKNAASENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNF
C9 KSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNF
C10 KPETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNF
*. ** ****:*. *: ***:******.******* *:******: ***:
C1 GDREMIKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTRDEDDALWLHYKGA
C2 GDQTMLKLGTDDPRFPAAAQMAPNTAAFLFMSHFSTREEGDALWLNYKGA
C3 GDLEMLKLGADDPRFPAVAQMAPNVAAFMFMSHFSTRDEEDALWLNYRGA
C4 GDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGA
C5 GDREMIKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTRDEDDALWLHYKGA
C6 GDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGA
C7 GDQTILKLGTDDPRFPVAAQMAPNVASFLFMSHFSTRDEDEALWLQYKGA
C8 GDQTMLKLGTDDPRFPAAAQMAPNTAAFLFMSHFSTREEGDALWLNYKGA
C9 GDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGA
C10 GDQTMLKLGTDDPRFPAAAQMAPNVAAFLFMSHFSTREEGDALWLNYKGA
** ::***.*****...******.::*:****:***:* :****:*:**
C1 IKLPKDDPNYEQWTKILAENLNAYKDFPPTEPKKDKKKKEETAQDTVIFE
C2 IKLPKDDPNYNQWVKILEENLNAYKSFPPPEPKKDKKKKEETSSETVVFE
C3 IKLPKSDPNFEQWTKLLEENLNAYKTFPPPAPKKDKKKKEEASQEIAIFE
C4 IKLPKDDPNYEQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFE
C5 IKLPKDDPNYEQWTKILAENLNAYKDFPPTEPKKDKKKKEETAQDTVIFE
C6 IKLPKDDPNYEQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFE
C7 IKLPKADPNYEQWVKFLDENLNAYKNFPPPEPKKDKKKKEEVSQEIIVHE
C8 IKLPKDDPNYNQWVKILEENLNAYKSFPPPEPKKEKKKKEETSSETVVFE
C9 IKLPKDDPNYEQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFE
C10 IKLPKDDPNYNQWVKVLEENLNAYKDFPPPEPKKDKKKKEEVSAETVVFE
***** ***::**.*.* ******* ***. ***:****** : : :.*
C1 DASTGTDQTVVKVWVKDQDAQTDDEWLGGDETVYEDEDDRPKTQRRHKKR
C2 DASTGTDQPVVKVWVKDEGMQTDDEWLGGDDTVYEEEEDKPKVQRRHKKR
C3 DASTGTDQQIVKVWVKDEGAQTDEEWLGGDDTVYEEEDDRPKTQRRHKKR
C4 DASTGTDQAVVKVWVKDEGAQTDDEWLGGDDTVYEEEDDRPKTQRRHKKR
C5 DASTGTDQTVVKVWVKDQDAQTDDEWLGGDETVYEDEDDRPKTQRRHKKR
C6 DASTGTDQAVVKVWVKDEGAQTDDEWLGGDDTVYEEEDDRPKTQRRHKKR
C7 DASTGTDQPIVKVWVKDEGAQTDDEWLGGDDTVYEEEEDKPKVQRRHKKR
C8 DASTGTDQPVVKVWVKDEGMQTDDEWLGGDDTVYEEEEDKPKVQRRHKKR
C9 DASTGTDQAVVKVWVKDEGAQTDDEWLGGDDTVYEEEDDRPKTQRRHKKR
C10 DASTGTDQPVVKVWVKDEGMQTDDEWLGGDDTVYEDEEDKPKTQRRHKKR
******** :*******:. ***:******:****:*:*:**.*******
C1 GSTASRVTIADPTNAGAERS
C2 GSTASRVTVADPTNLAAERS
C3 NSTASRVTIADPMNATSERS
C4 NSTASRVTIADPMNATSERS
C5 GSTASRVTIADPTNAGAERS
C6 NSTASRVTIADPMNATSERS
C7 GSTASRVTVADPTNVAAERS
C8 GSTASRVTVADPTNLAAERS
C9 NSTASRVTIADPMNATSERS
C10 HSTASRVTIADPTNVNSERS
*******:*** * :***
-- Starting log on Wed Oct 26 00:50:00 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.10 sec, SCORE=994, Nseq=10, Len=470
C1 MSGRNRSRSGTPSPKVTFKQESDGSDSESERRNGNRNGARPKNNNSRGSA
C2 MSGRNKPRPGNQSPKVTFKQESDGSDSESERRNGNRNGARPKNNNNRGFG
C3 MSGRNKPRPGSQSPKVTFKQESDGSDSESERRNGNRSGARPKNNNNRGGN
C4 MSGRNKPRPTSQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGA
C5 MSGRNRSRSGTPSPKVTFKQESDGSDSESERRNGNRNGARPKNNNSRGSA
C6 MSGRNKPRPTSQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGA
C7 MSGRNKPRPSNQ-AKVTFKQESDNSDSESERRNGNRSGARPKNNNNRGAN
C8 MSGRNKPRPGSQSPKVTFKQESDGSDSESERRNGNRNGARPKNNNGRGAG
C9 MSGRNKPRLIFQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGA
C10 MSGRNKPRPSNQ-PKVTFKQESDGSDSESERRNGNRNGARPKTNNNRGAG
*****:.* .*********.************.***.*.**.**
C1 PKPEKPKAAPPQNVSWFAPLVQTGKAELRFPRGEGVPVSQGVDSTYEHGY
C2 SKPEKPKAAPPQNVSWYAPLVQTGKADLRFPRGEGVPISQGVDPIYQHGY
C3 SKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGEGVPISQGVDPVYLHGY
C4 PKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGY
C5 PKPEKPKAAPPQNVSWFAPLVQTGKAELRFPRGEGVPVSQGVDSTYEHGY
C6 PKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGY
C7 PKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGEGVPISQGVDLNYLHGY
C8 SKPEKPKAAPPQNVSWYAPLVQTGKNDLRFPRGQGVPISQGIDDIYNHGY
C9 PKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGY
C10 SKPEKPKAAPPQNVSWYAPLVQTGKADLRFPRGEGVPISQGVDPIYQHGY
.***************:******** :******:***:***:* * ***
C1 WLRTQRSFQKGGKQVLANPRWYFYYTGTGRFGDLRFGTKNPDIVWVGQEG
C2 WTRTQRSFQKGGKTVQANPRWYFYYTGTGRYADLRWGQKNPDIVWVGEEG
C3 WVRTQRNFQKGGKTVQANPRWYFYYTGTGRHADLRWGQKNPDLIWVGEDG
C4 WVRTQRTFQKGGKPVSANPRWYFYYTGTGRYGDMRYGTKNPDIYWVGEEG
C5 WLRTQRSFQKGGKQVLANPRWYFYYTGTGRFGDLRFGTKNPDIVWVGQEG
C6 WVRTQRTFQKGGKPVSANPRWYFYYTGTGRYGDMRYGTKNPDIYWVGEEG
C7 WVRTQRSYQKGGKTVQANARWYFYYTGTGRFGDLRWGQKNPEIIWVGEEG
C8 WVRTQRNFQKGGKQVAANPRWYFYYTGTGRYADLRYGSKNPDIIWVGAEG
C9 WVRTQRTFQKGGKPVSANPRWYFYYTGTGRYGDMRYGTKNPDIYWVGEEG
C10 WTRTQRSFQKGGKTVQANPRWYFYYTGTGRYADLRWGQKNPDIVWVGEEG
* ****.:***** * **.***********..*:*:* ***:: *** :*
C1 ANINRLGDMGTRNPSNDGAIPVQLAGGIPKGFYAEGRGSRGNSRSSSRNS
C2 ANINRVGDMGTRNPNNDAAIAVQLGNGIPKGFYAEGRGSRGNSRNSSRNS
C3 ANINRIGDMGTRNPNNDSAIPVQFGSGIPKGFYAEGRNSRGNSRNSSRNS
C4 ANVNRVGDMGTRNPNNDAAISVQLADGIPKGFYAEGRNSRGNSRNSSRNS
C5 ANINRLGDMGTRNPSNDGAIPVQLAGGIPKGFYAEGRGSRGNSRSSSRNS
C6 ANVNRVGDMGTRNPNNDAAISVQLADGIPKGFYAEGRNSRGNSRNSSRNS
C7 ANVNRVGDMGTRNPNNDAAIPVQLSGGIPKGFYAEGRNSRGNSRNGSRNS
C8 ANINRVGDIGTRNPSNDAAIPVQLADGIPKGFYAEGRNSRGNSRNNSRSS
C9 ANVNRVGDMGTRNPNNDAAISVQLADGIPKGFYAEGRNSRGNSRNSSRNS
C10 ANINRVGDMGTRNPNNDAAIAVQLGNGIPKGFYAEGRGSRGNSRNSSRNS
**:**:**:*****.**.**.**:..***********.******..**.*
C1 SRASSRGNSRASSRGASPGR--PAANPSTEPWMAYLVQKLERLESQVSGT
C2 SRASSRSSSRPNSRGASPGRNTPNPGAGSEPWMAYLVSKLENLEAKVNGT
C3 SRASTRGNSRANSRGASPGRNTPSGGSNSEPWMAYLVQKLEALETKVNGN
C4 SRASSRGGSRPGSRGASPGRATPS-GSGAEPWMAYLVSKLETLEAKVNGT
C5 SRASSRGNSRASSRGASPGR--PAANPSTEPWMAYLVQKLERLESQVSGT
C6 SRASSRGGSRPGSRGASPGRATPS-GSGVEPWMAYLVSKLETLEAKVNGT
C7 SRASSRGSSRASSRGASPGRNTPSGGSNSEPWMAYLVQKLEALETKVNGN
C8 SRASSRGSSRASSRGPSPGRATPS-GGNSEPWMAYLVQKLEALETKVNGN
C9 SRASSRGGSRPGSRGASPGRATPS-GSGAEPWMAYLVSKLETLEAKVNGT
C10 SRASSRSSSRPNSRGASPGRNTPNPGSGSEPWMAYLVSKLENLEAKVNGT
****:*..**..***.**** * . . ********.*** **::*.*.
C1 KPATKNPVQVTKNEAAANAKKLRHKRTAHKGSGVTVNYGRRGPGDLEGNF
C2 KPETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNF
C3 KSETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTANFGRRGPGELEGNF
C4 KSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNF
C5 KPATKNPVQVTKNEAAANAKKLRHKRTAHKGSGVTVNYGRRGPGDLEGNF
C6 KSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNF
C7 KSETKTPVQVSKNAAAENAKRLRHKRTPHKGSGVTVNYGRRGPGDWEGNL
C8 KPATKAPVQVSKNAASENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNF
C9 KSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNF
C10 KPETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNF
*. ** ****:*. *: ***:******.******* *:******: ***:
C1 GDREMIKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTRDEDDALWLHYKGA
C2 GDQTMLKLGTDDPRFPAAAQMAPNTAAFLFMSHFSTREEGDALWLNYKGA
C3 GDLEMLKLGADDPRFPAVAQMAPNVAAFMFMSHFSTRDEEDALWLNYRGA
C4 GDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGA
C5 GDREMIKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTRDEDDALWLHYKGA
C6 GDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGA
C7 GDQTILKLGTDDPRFPVAAQMAPNVASFLFMSHFSTRDEDEALWLQYKGA
C8 GDQTMLKLGTDDPRFPAAAQMAPNTAAFLFMSHFSTREEGDALWLNYKGA
C9 GDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGA
C10 GDQTMLKLGTDDPRFPAAAQMAPNVAAFLFMSHFSTREEGDALWLNYKGA
** ::***.*****...******.::*:****:***:* :****:*:**
C1 IKLPKDDPNYEQWTKILAENLNAYKDFPPTEPKKDKKKKEETAQDTVIFE
C2 IKLPKDDPNYNQWVKILEENLNAYKSFPPPEPKKDKKKKEETSSETVVFE
C3 IKLPKSDPNFEQWTKLLEENLNAYKTFPPPAPKKDKKKKEEASQEIAIFE
C4 IKLPKDDPNYEQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFE
C5 IKLPKDDPNYEQWTKILAENLNAYKDFPPTEPKKDKKKKEETAQDTVIFE
C6 IKLPKDDPNYEQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFE
C7 IKLPKADPNYEQWVKFLDENLNAYKNFPPPEPKKDKKKKEEVSQEIIVHE
C8 IKLPKDDPNYNQWVKILEENLNAYKSFPPPEPKKEKKKKEETSSETVVFE
C9 IKLPKDDPNYEQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFE
C10 IKLPKDDPNYNQWVKVLEENLNAYKDFPPPEPKKDKKKKEEVSAETVVFE
***** ***::**.*.* ******* ***. ***:****** : : :.*
C1 DASTGTDQTVVKVWVKDQDAQTDDEWLGGDETVYEDEDDRPKTQRRHKKR
C2 DASTGTDQPVVKVWVKDEGMQTDDEWLGGDDTVYEEEEDKPKVQRRHKKR
C3 DASTGTDQQIVKVWVKDEGAQTDEEWLGGDDTVYEEEDDRPKTQRRHKKR
C4 DASTGTDQAVVKVWVKDEGAQTDDEWLGGDDTVYEEEDDRPKTQRRHKKR
C5 DASTGTDQTVVKVWVKDQDAQTDDEWLGGDETVYEDEDDRPKTQRRHKKR
C6 DASTGTDQAVVKVWVKDEGAQTDDEWLGGDDTVYEEEDDRPKTQRRHKKR
C7 DASTGTDQPIVKVWVKDEGAQTDDEWLGGDDTVYEEEEDKPKVQRRHKKR
C8 DASTGTDQPVVKVWVKDEGMQTDDEWLGGDDTVYEEEEDKPKVQRRHKKR
C9 DASTGTDQAVVKVWVKDEGAQTDDEWLGGDDTVYEEEDDRPKTQRRHKKR
C10 DASTGTDQPVVKVWVKDEGMQTDDEWLGGDDTVYEDEEDKPKTQRRHKKR
******** :*******:. ***:******:****:*:*:**.*******
C1 GSTASRVTIADPTNAGAERS
C2 GSTASRVTVADPTNLAAERS
C3 NSTASRVTIADPMNATSERS
C4 NSTASRVTIADPMNATSERS
C5 GSTASRVTIADPTNAGAERS
C6 NSTASRVTIADPMNATSERS
C7 GSTASRVTVADPTNVAAERS
C8 GSTASRVTVADPTNLAAERS
C9 NSTASRVTIADPMNATSERS
C10 HSTASRVTIADPTNVNSERS
*******:*** * :***
-- Starting log on Wed Oct 26 01:10:05 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result/gapped_alignment/codeml,BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 10 taxa and 1410 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C2
Taxon 4 -> C3
Taxon 5 -> C4
Taxon 6 -> C5
Taxon 7 -> C6
Taxon 8 -> C7
Taxon 9 -> C8
Taxon 10 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1666746607
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 716345213
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 5091284458
Seed = 1077805130
Swapseed = 1666746607
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 107 unique site patterns
Division 2 has 84 unique site patterns
Division 3 has 284 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -10283.649182 -- 35.653401
Chain 2 -- -10262.254524 -- 35.653401
Chain 3 -- -9932.416829 -- 35.653401
Chain 4 -- -9825.052425 -- 35.653401
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -9119.195479 -- 35.653401
Chain 2 -- -10517.207503 -- 35.653401
Chain 3 -- -10573.336661 -- 35.653401
Chain 4 -- -9983.851526 -- 35.653401
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-10283.649] (-10262.255) (-9932.417) (-9825.052) * [-9119.195] (-10517.208) (-10573.337) (-9983.852)
1000 -- (-6394.246) (-6386.422) (-6394.228) [-6334.602] * (-6463.408) [-6358.552] (-6392.625) (-6390.885) -- 0:16:39
2000 -- (-6325.123) (-6372.873) (-6302.463) [-6280.041] * (-6402.092) (-6307.296) [-6303.751] (-6327.503) -- 0:16:38
3000 -- (-6305.658) (-6326.968) (-6278.864) [-6283.090] * (-6338.070) (-6299.649) [-6286.143] (-6300.308) -- 0:16:37
4000 -- (-6283.919) (-6319.465) (-6289.775) [-6284.178] * (-6321.055) (-6289.007) [-6278.722] (-6278.270) -- 0:16:36
5000 -- (-6289.671) (-6303.498) [-6282.659] (-6288.434) * (-6295.713) (-6284.258) (-6281.279) [-6278.306] -- 0:16:35
Average standard deviation of split frequencies: 0.104757
6000 -- (-6288.960) (-6283.070) [-6280.118] (-6287.654) * (-6284.163) (-6287.449) [-6280.605] (-6280.447) -- 0:16:34
7000 -- (-6285.408) (-6289.376) [-6281.485] (-6289.784) * (-6286.651) (-6289.360) (-6278.974) [-6282.122] -- 0:18:54
8000 -- (-6282.171) (-6294.666) (-6273.737) [-6286.639] * (-6278.142) (-6296.626) [-6283.334] (-6281.676) -- 0:18:36
9000 -- (-6285.787) (-6279.439) (-6283.803) [-6280.523] * (-6283.425) (-6295.328) (-6284.005) [-6281.028] -- 0:18:21
10000 -- (-6282.204) (-6280.681) [-6279.508] (-6282.595) * (-6279.582) [-6286.817] (-6278.577) (-6282.846) -- 0:18:09
Average standard deviation of split frequencies: 0.117851
11000 -- (-6293.359) [-6281.305] (-6287.140) (-6289.839) * [-6286.356] (-6291.473) (-6290.807) (-6275.675) -- 0:17:58
12000 -- (-6290.823) [-6278.828] (-6285.081) (-6285.103) * (-6279.385) [-6297.483] (-6289.941) (-6285.274) -- 0:17:50
13000 -- (-6289.651) (-6288.913) (-6286.339) [-6277.117] * [-6276.807] (-6292.652) (-6283.218) (-6277.953) -- 0:18:58
14000 -- (-6284.230) [-6273.430] (-6285.441) (-6283.698) * (-6291.290) [-6282.091] (-6279.055) (-6290.775) -- 0:18:46
15000 -- (-6278.072) (-6286.347) [-6278.578] (-6278.738) * [-6277.959] (-6294.430) (-6284.572) (-6283.778) -- 0:18:36
Average standard deviation of split frequencies: 0.100173
16000 -- (-6280.578) [-6282.404] (-6283.183) (-6280.907) * (-6287.057) (-6293.374) [-6282.728] (-6282.490) -- 0:18:27
17000 -- [-6277.310] (-6284.336) (-6294.786) (-6283.860) * (-6294.607) [-6286.075] (-6280.701) (-6287.102) -- 0:18:18
18000 -- (-6291.204) (-6280.406) [-6282.775] (-6281.362) * (-6279.890) (-6288.273) (-6282.984) [-6284.803] -- 0:18:11
19000 -- (-6293.026) (-6281.628) [-6277.475] (-6290.440) * (-6296.952) (-6290.238) (-6282.905) [-6289.625] -- 0:18:55
20000 -- (-6289.078) (-6286.332) (-6278.348) [-6288.907] * [-6277.743] (-6284.419) (-6281.603) (-6285.586) -- 0:18:47
Average standard deviation of split frequencies: 0.079835
21000 -- (-6282.572) [-6274.817] (-6290.778) (-6290.767) * (-6282.621) (-6290.188) [-6282.307] (-6293.087) -- 0:18:38
22000 -- (-6279.304) (-6277.928) [-6287.348] (-6282.889) * (-6285.082) [-6285.604] (-6282.757) (-6277.342) -- 0:18:31
23000 -- (-6278.057) [-6286.392] (-6277.243) (-6282.211) * (-6277.357) (-6284.006) [-6281.305] (-6293.549) -- 0:18:24
24000 -- (-6295.361) (-6287.438) [-6276.509] (-6285.911) * (-6281.058) (-6291.935) (-6283.277) [-6287.984] -- 0:18:18
25000 -- (-6288.069) (-6289.453) (-6288.993) [-6281.607] * (-6278.516) (-6278.787) [-6282.340] (-6289.500) -- 0:18:12
Average standard deviation of split frequencies: 0.056041
26000 -- (-6285.695) (-6280.629) [-6288.548] (-6282.312) * [-6279.547] (-6286.072) (-6276.577) (-6276.431) -- 0:18:43
27000 -- (-6297.954) (-6282.554) [-6281.387] (-6279.857) * (-6285.991) [-6278.533] (-6288.616) (-6289.665) -- 0:18:37
28000 -- (-6284.361) (-6287.604) (-6289.736) [-6277.075] * (-6281.139) [-6289.611] (-6288.580) (-6278.114) -- 0:18:30
29000 -- (-6288.426) [-6287.367] (-6286.917) (-6274.658) * (-6284.477) (-6280.741) (-6286.744) [-6276.713] -- 0:18:24
30000 -- [-6288.594] (-6280.990) (-6287.252) (-6292.584) * [-6277.857] (-6284.573) (-6283.236) (-6290.967) -- 0:18:19
Average standard deviation of split frequencies: 0.041504
31000 -- (-6287.730) (-6280.934) [-6283.428] (-6302.657) * [-6275.992] (-6287.501) (-6281.276) (-6280.978) -- 0:18:14
32000 -- (-6284.903) [-6281.687] (-6287.564) (-6282.386) * (-6279.744) (-6293.215) (-6282.918) [-6279.284] -- 0:18:09
33000 -- (-6288.804) [-6291.242] (-6293.500) (-6289.448) * (-6285.682) (-6282.406) (-6279.613) [-6273.824] -- 0:18:33
34000 -- (-6282.363) [-6279.158] (-6284.129) (-6291.000) * (-6290.214) (-6287.677) (-6280.683) [-6279.962] -- 0:18:28
35000 -- (-6286.694) (-6285.298) [-6290.337] (-6292.804) * [-6284.212] (-6277.453) (-6279.916) (-6286.179) -- 0:18:22
Average standard deviation of split frequencies: 0.031427
36000 -- (-6285.819) (-6287.612) (-6283.443) [-6280.637] * (-6286.014) (-6289.355) [-6287.773] (-6275.060) -- 0:18:17
37000 -- (-6286.555) [-6276.698] (-6285.124) (-6282.186) * (-6284.821) (-6277.158) [-6277.522] (-6285.570) -- 0:18:13
38000 -- (-6281.373) [-6277.679] (-6296.086) (-6289.788) * (-6282.919) (-6282.156) (-6288.385) [-6277.655] -- 0:18:08
39000 -- [-6281.384] (-6284.367) (-6285.320) (-6299.817) * (-6295.862) (-6278.830) [-6282.946] (-6282.813) -- 0:18:04
40000 -- (-6281.533) (-6284.094) (-6278.842) [-6289.415] * (-6286.216) [-6282.984] (-6272.237) (-6283.155) -- 0:18:24
Average standard deviation of split frequencies: 0.012880
41000 -- (-6275.165) [-6280.439] (-6283.942) (-6285.135) * (-6291.690) (-6289.893) [-6280.814] (-6286.229) -- 0:18:19
42000 -- [-6278.135] (-6277.143) (-6283.343) (-6282.226) * (-6288.445) (-6290.097) [-6272.860] (-6288.248) -- 0:18:14
43000 -- (-6279.540) (-6287.888) (-6277.890) [-6284.720] * (-6283.645) [-6282.964] (-6277.482) (-6284.126) -- 0:18:10
44000 -- [-6284.847] (-6276.895) (-6284.220) (-6289.599) * (-6295.780) (-6280.413) [-6276.369] (-6287.053) -- 0:18:06
45000 -- (-6291.579) (-6280.297) [-6277.479] (-6297.191) * (-6283.546) (-6290.270) [-6290.670] (-6283.677) -- 0:18:02
Average standard deviation of split frequencies: 0.016397
46000 -- (-6279.406) [-6279.244] (-6284.528) (-6293.034) * (-6281.886) (-6282.887) (-6283.915) [-6274.843] -- 0:17:58
47000 -- (-6294.546) [-6286.054] (-6284.726) (-6285.237) * (-6284.502) (-6283.116) (-6280.842) [-6280.642] -- 0:18:14
48000 -- (-6290.728) (-6283.203) [-6284.654] (-6284.199) * (-6288.281) (-6282.903) (-6281.931) [-6286.520] -- 0:18:10
49000 -- [-6279.632] (-6283.932) (-6292.245) (-6280.508) * (-6295.467) (-6280.630) [-6274.644] (-6292.177) -- 0:18:06
50000 -- (-6278.330) (-6292.837) (-6289.727) [-6283.529] * (-6290.377) [-6279.260] (-6288.929) (-6294.249) -- 0:18:03
Average standard deviation of split frequencies: 0.018608
51000 -- (-6288.948) [-6281.217] (-6289.012) (-6288.618) * [-6290.650] (-6280.228) (-6287.341) (-6282.636) -- 0:17:59
52000 -- (-6288.070) (-6291.084) [-6282.074] (-6275.392) * (-6276.606) (-6284.984) (-6278.722) [-6281.010] -- 0:17:55
53000 -- (-6284.182) [-6281.741] (-6288.782) (-6293.740) * [-6275.605] (-6286.455) (-6284.829) (-6279.533) -- 0:17:52
54000 -- [-6282.133] (-6292.935) (-6279.096) (-6284.077) * [-6278.053] (-6288.762) (-6290.768) (-6281.936) -- 0:17:48
55000 -- (-6284.632) (-6281.276) (-6286.367) [-6281.967] * [-6282.813] (-6290.722) (-6281.128) (-6286.036) -- 0:18:02
Average standard deviation of split frequencies: 0.018519
56000 -- (-6282.423) (-6280.695) [-6288.043] (-6283.153) * (-6280.755) (-6286.274) (-6285.717) [-6285.937] -- 0:17:58
57000 -- (-6292.318) [-6275.924] (-6291.711) (-6293.335) * (-6280.332) (-6288.638) (-6283.099) [-6284.579] -- 0:17:55
58000 -- (-6291.875) (-6290.225) (-6288.487) [-6286.829] * (-6285.264) (-6284.241) [-6279.166] (-6285.401) -- 0:17:51
59000 -- (-6289.372) (-6280.371) (-6280.904) [-6282.350] * (-6283.518) (-6285.680) [-6278.035] (-6280.997) -- 0:17:48
60000 -- (-6285.464) (-6289.550) (-6278.437) [-6284.095] * [-6275.342] (-6294.738) (-6276.630) (-6282.170) -- 0:17:45
Average standard deviation of split frequencies: 0.017095
61000 -- (-6298.455) [-6286.833] (-6284.243) (-6287.453) * (-6286.337) [-6275.595] (-6285.539) (-6284.400) -- 0:17:42
62000 -- (-6288.945) [-6284.868] (-6295.887) (-6302.090) * [-6281.502] (-6280.385) (-6281.949) (-6281.315) -- 0:17:54
63000 -- [-6281.276] (-6291.217) (-6290.133) (-6288.903) * [-6275.556] (-6291.316) (-6277.112) (-6285.480) -- 0:17:50
64000 -- (-6272.973) (-6286.879) [-6284.596] (-6282.602) * (-6284.185) [-6283.020] (-6279.110) (-6280.556) -- 0:17:47
65000 -- [-6280.385] (-6291.109) (-6286.207) (-6285.368) * (-6293.929) (-6277.167) (-6283.132) [-6282.762] -- 0:17:44
Average standard deviation of split frequencies: 0.014999
66000 -- (-6283.538) (-6289.736) [-6286.885] (-6284.311) * (-6282.223) (-6287.839) [-6286.759] (-6286.727) -- 0:17:41
67000 -- (-6288.477) (-6276.350) (-6280.797) [-6283.515] * (-6286.893) (-6299.209) (-6287.769) [-6279.585] -- 0:17:38
68000 -- [-6290.493] (-6279.217) (-6285.999) (-6279.435) * (-6282.418) (-6296.673) [-6285.509] (-6285.581) -- 0:17:35
69000 -- (-6285.373) [-6279.338] (-6283.426) (-6282.546) * (-6303.248) [-6277.320] (-6279.983) (-6281.031) -- 0:17:32
70000 -- (-6288.953) (-6285.644) [-6283.159] (-6281.294) * (-6282.123) (-6276.888) (-6282.459) [-6278.637] -- 0:17:42
Average standard deviation of split frequencies: 0.017344
71000 -- (-6286.695) (-6280.300) (-6291.463) [-6280.263] * [-6275.409] (-6286.854) (-6281.199) (-6288.316) -- 0:17:39
72000 -- (-6291.446) (-6290.125) [-6275.532] (-6292.070) * (-6275.017) [-6281.675] (-6285.224) (-6279.766) -- 0:17:36
73000 -- (-6287.267) (-6288.296) (-6298.794) [-6284.750] * (-6285.222) (-6279.012) (-6282.476) [-6283.268] -- 0:17:33
74000 -- (-6293.109) (-6274.740) [-6283.494] (-6286.478) * (-6279.521) (-6279.054) (-6282.946) [-6284.364] -- 0:17:31
75000 -- (-6295.438) [-6284.517] (-6282.203) (-6286.947) * (-6285.960) [-6275.889] (-6292.697) (-6284.277) -- 0:17:28
Average standard deviation of split frequencies: 0.014886
76000 -- (-6285.119) [-6283.155] (-6276.643) (-6282.844) * (-6283.926) (-6291.961) [-6276.556] (-6281.840) -- 0:17:25
77000 -- (-6292.153) (-6281.708) [-6277.512] (-6288.588) * (-6286.068) (-6285.344) (-6293.088) [-6280.656] -- 0:17:34
78000 -- (-6306.176) [-6281.605] (-6291.972) (-6296.218) * [-6280.442] (-6279.215) (-6284.452) (-6291.079) -- 0:17:32
79000 -- (-6279.773) (-6278.867) (-6279.746) [-6279.785] * (-6289.669) (-6285.603) [-6283.894] (-6285.561) -- 0:17:29
80000 -- (-6291.404) [-6280.624] (-6289.193) (-6281.521) * (-6283.886) (-6287.057) [-6283.080] (-6289.426) -- 0:17:26
Average standard deviation of split frequencies: 0.014610
81000 -- (-6287.848) [-6278.247] (-6279.829) (-6276.091) * (-6285.414) (-6285.961) [-6281.563] (-6285.431) -- 0:17:23
82000 -- (-6282.395) (-6284.595) (-6279.353) [-6282.579] * [-6277.792] (-6283.239) (-6284.343) (-6287.268) -- 0:17:21
83000 -- (-6292.205) (-6280.050) [-6281.457] (-6281.379) * (-6284.423) (-6285.868) [-6280.219] (-6285.841) -- 0:17:18
84000 -- (-6290.547) (-6276.949) [-6284.865] (-6283.167) * [-6276.007] (-6291.968) (-6280.723) (-6285.353) -- 0:17:15
85000 -- [-6288.175] (-6281.152) (-6292.174) (-6281.061) * (-6280.013) (-6282.727) [-6278.845] (-6283.119) -- 0:17:24
Average standard deviation of split frequencies: 0.015348
86000 -- (-6302.452) [-6282.788] (-6280.958) (-6280.116) * (-6289.754) [-6279.175] (-6281.396) (-6282.620) -- 0:17:21
87000 -- (-6289.378) [-6277.066] (-6288.426) (-6281.811) * (-6289.996) (-6281.632) (-6284.931) [-6287.441] -- 0:17:18
88000 -- (-6290.920) (-6280.642) (-6290.008) [-6272.143] * (-6287.409) (-6282.256) (-6281.314) [-6276.544] -- 0:17:16
89000 -- (-6279.813) (-6281.786) (-6295.704) [-6278.099] * (-6283.552) (-6287.558) (-6282.726) [-6281.595] -- 0:17:13
90000 -- (-6282.571) [-6280.157] (-6281.363) (-6284.660) * (-6285.435) (-6286.957) [-6283.347] (-6287.284) -- 0:17:11
Average standard deviation of split frequencies: 0.017158
91000 -- (-6288.777) (-6278.392) (-6286.986) [-6284.500] * (-6295.291) [-6278.109] (-6287.412) (-6286.300) -- 0:17:18
92000 -- (-6288.546) (-6284.232) (-6290.421) [-6285.212] * (-6280.133) (-6285.340) (-6277.721) [-6281.518] -- 0:17:16
93000 -- [-6282.804] (-6277.552) (-6278.734) (-6286.706) * (-6285.018) [-6284.026] (-6294.860) (-6282.397) -- 0:17:13
94000 -- (-6286.181) (-6287.607) (-6280.901) [-6283.489] * (-6289.156) (-6279.402) (-6287.607) [-6285.604] -- 0:17:11
95000 -- (-6295.918) [-6278.540] (-6282.284) (-6288.453) * [-6286.150] (-6273.636) (-6289.219) (-6287.940) -- 0:17:08
Average standard deviation of split frequencies: 0.014731
96000 -- [-6275.737] (-6293.180) (-6276.200) (-6284.152) * (-6283.216) [-6282.988] (-6278.129) (-6295.268) -- 0:17:06
97000 -- (-6287.781) [-6291.773] (-6285.463) (-6284.756) * (-6287.871) (-6282.231) [-6281.833] (-6280.530) -- 0:17:04
98000 -- (-6288.976) [-6293.673] (-6289.001) (-6286.368) * (-6288.850) [-6281.095] (-6283.018) (-6288.877) -- 0:17:10
99000 -- (-6285.387) [-6276.602] (-6288.478) (-6277.874) * [-6279.926] (-6287.559) (-6283.732) (-6285.973) -- 0:17:08
100000 -- [-6283.226] (-6280.214) (-6283.407) (-6279.523) * (-6288.307) (-6279.261) [-6292.764] (-6286.990) -- 0:17:06
Average standard deviation of split frequencies: 0.014048
101000 -- (-6283.424) (-6284.958) [-6284.814] (-6290.031) * [-6277.002] (-6282.937) (-6282.285) (-6282.652) -- 0:17:03
102000 -- (-6282.495) (-6283.461) (-6290.843) [-6275.392] * [-6273.240] (-6288.903) (-6287.985) (-6286.198) -- 0:17:01
103000 -- (-6280.573) (-6283.718) [-6285.970] (-6278.664) * (-6287.161) [-6283.253] (-6278.858) (-6284.064) -- 0:16:58
104000 -- (-6281.085) (-6291.667) (-6286.970) [-6287.675] * [-6282.696] (-6277.653) (-6282.496) (-6278.969) -- 0:16:56
105000 -- [-6277.031] (-6276.587) (-6287.008) (-6281.975) * (-6281.105) [-6286.030] (-6294.686) (-6289.198) -- 0:17:02
Average standard deviation of split frequencies: 0.013786
106000 -- (-6280.723) [-6282.393] (-6287.292) (-6282.651) * [-6275.948] (-6286.359) (-6290.840) (-6283.217) -- 0:17:00
107000 -- (-6286.500) (-6286.241) [-6284.122] (-6277.349) * [-6291.895] (-6280.582) (-6285.715) (-6284.454) -- 0:16:58
108000 -- (-6292.092) (-6281.759) (-6288.933) [-6276.897] * (-6287.775) (-6284.329) [-6281.432] (-6287.684) -- 0:16:55
109000 -- (-6292.656) (-6285.755) (-6281.497) [-6283.545] * [-6281.578] (-6284.045) (-6282.590) (-6278.617) -- 0:16:53
110000 -- (-6289.556) (-6283.823) [-6282.210] (-6284.331) * [-6284.532] (-6300.998) (-6281.689) (-6280.217) -- 0:16:51
Average standard deviation of split frequencies: 0.014057
111000 -- [-6278.050] (-6289.297) (-6283.375) (-6281.869) * (-6280.699) (-6285.141) [-6286.757] (-6295.202) -- 0:16:49
112000 -- (-6287.777) (-6289.103) (-6296.760) [-6278.739] * (-6279.299) (-6291.500) [-6281.225] (-6285.815) -- 0:16:54
113000 -- (-6284.209) [-6280.095] (-6285.090) (-6284.677) * (-6287.196) (-6290.691) (-6283.632) [-6277.473] -- 0:16:52
114000 -- (-6279.420) (-6279.976) [-6285.392] (-6283.762) * [-6280.491] (-6279.977) (-6279.073) (-6282.382) -- 0:16:50
115000 -- [-6277.359] (-6288.873) (-6274.335) (-6284.061) * (-6293.750) [-6274.009] (-6280.184) (-6281.136) -- 0:16:48
Average standard deviation of split frequencies: 0.015443
116000 -- (-6280.850) (-6286.902) [-6280.198] (-6289.367) * (-6292.299) [-6283.814] (-6279.095) (-6301.253) -- 0:16:45
117000 -- [-6282.286] (-6288.742) (-6280.388) (-6279.653) * (-6289.398) (-6283.553) (-6283.167) [-6280.735] -- 0:16:43
118000 -- [-6275.828] (-6290.551) (-6276.958) (-6288.002) * (-6284.331) [-6274.438] (-6280.655) (-6286.470) -- 0:16:41
119000 -- (-6282.375) [-6284.834] (-6279.811) (-6290.171) * (-6289.029) (-6281.621) [-6283.207] (-6285.316) -- 0:16:46
120000 -- [-6282.888] (-6281.513) (-6282.354) (-6285.644) * [-6285.610] (-6287.983) (-6282.984) (-6280.188) -- 0:16:44
Average standard deviation of split frequencies: 0.011720
121000 -- (-6288.753) (-6290.105) (-6287.781) [-6288.409] * (-6289.709) (-6286.377) (-6282.964) [-6288.429] -- 0:16:42
122000 -- [-6282.883] (-6285.125) (-6279.537) (-6280.871) * (-6280.873) (-6283.219) [-6282.581] (-6284.766) -- 0:16:40
123000 -- (-6284.879) (-6282.724) (-6282.400) [-6282.503] * (-6287.102) (-6278.118) (-6283.688) [-6288.748] -- 0:16:38
124000 -- (-6284.698) [-6284.384] (-6288.970) (-6276.510) * (-6286.602) (-6297.847) [-6285.984] (-6289.265) -- 0:16:36
125000 -- (-6284.632) (-6283.946) [-6289.919] (-6286.638) * (-6288.438) (-6286.273) [-6281.420] (-6288.812) -- 0:16:34
Average standard deviation of split frequencies: 0.009727
126000 -- (-6288.056) (-6287.267) [-6279.428] (-6288.327) * [-6290.273] (-6286.515) (-6278.298) (-6285.632) -- 0:16:31
127000 -- (-6281.419) (-6280.862) (-6294.683) [-6282.708] * [-6281.047] (-6281.330) (-6282.010) (-6290.657) -- 0:16:36
128000 -- (-6281.511) [-6281.515] (-6281.520) (-6286.620) * (-6289.430) (-6284.831) (-6281.479) [-6278.898] -- 0:16:34
129000 -- (-6289.843) (-6285.359) (-6290.092) [-6278.606] * (-6293.704) (-6276.958) [-6281.910] (-6281.915) -- 0:16:32
130000 -- (-6285.935) (-6282.388) (-6277.307) [-6284.271] * (-6284.549) [-6284.812] (-6290.636) (-6278.401) -- 0:16:30
Average standard deviation of split frequencies: 0.008298
131000 -- (-6286.626) (-6296.629) (-6278.052) [-6286.969] * (-6278.747) (-6282.814) [-6278.350] (-6288.351) -- 0:16:28
132000 -- (-6297.239) (-6278.614) (-6289.968) [-6283.976] * (-6282.813) (-6276.245) (-6295.854) [-6273.764] -- 0:16:26
133000 -- (-6289.863) (-6288.341) (-6282.355) [-6283.591] * (-6292.661) [-6282.091] (-6289.418) (-6285.622) -- 0:16:24
134000 -- (-6287.914) [-6283.134] (-6281.873) (-6287.740) * (-6292.165) (-6283.310) (-6283.612) [-6278.793] -- 0:16:28
135000 -- (-6282.516) (-6284.248) (-6280.888) [-6277.424] * [-6290.493] (-6292.780) (-6288.573) (-6282.117) -- 0:16:26
Average standard deviation of split frequencies: 0.007972
136000 -- (-6284.054) [-6280.477] (-6289.944) (-6281.094) * (-6277.222) (-6284.282) (-6288.394) [-6275.979] -- 0:16:24
137000 -- (-6286.234) (-6274.998) (-6278.288) [-6287.720] * (-6279.429) (-6277.399) [-6275.574] (-6283.151) -- 0:16:22
138000 -- (-6288.235) (-6284.278) (-6282.173) [-6282.119] * (-6290.513) (-6285.458) [-6278.553] (-6288.077) -- 0:16:20
139000 -- (-6280.617) (-6283.868) (-6289.498) [-6284.803] * (-6280.083) [-6280.183] (-6285.467) (-6284.283) -- 0:16:18
140000 -- (-6278.167) (-6284.273) (-6284.760) [-6277.649] * (-6292.702) (-6290.231) (-6280.862) [-6279.939] -- 0:16:16
Average standard deviation of split frequencies: 0.009048
141000 -- (-6288.761) (-6291.081) (-6286.363) [-6287.760] * (-6287.016) (-6281.054) (-6278.567) [-6279.999] -- 0:16:14
142000 -- (-6280.772) (-6285.238) [-6287.169] (-6281.670) * (-6278.857) (-6276.791) (-6285.987) [-6281.789] -- 0:16:18
143000 -- (-6292.398) (-6280.554) [-6274.814] (-6291.467) * (-6283.302) [-6278.882] (-6282.293) (-6280.890) -- 0:16:16
144000 -- (-6276.895) (-6293.724) (-6282.773) [-6283.609] * [-6282.883] (-6282.526) (-6287.322) (-6282.197) -- 0:16:14
145000 -- (-6284.127) (-6293.318) [-6283.192] (-6283.970) * (-6290.056) (-6282.808) [-6281.604] (-6280.578) -- 0:16:12
Average standard deviation of split frequencies: 0.007749
146000 -- [-6277.087] (-6279.138) (-6289.793) (-6279.699) * [-6280.430] (-6287.033) (-6287.182) (-6281.527) -- 0:16:10
147000 -- [-6278.588] (-6279.581) (-6286.909) (-6281.588) * (-6282.737) (-6288.917) (-6297.762) [-6275.564] -- 0:16:09
148000 -- [-6282.691] (-6283.599) (-6275.609) (-6284.323) * (-6286.620) [-6276.276] (-6286.219) (-6282.966) -- 0:16:07
149000 -- [-6277.202] (-6282.844) (-6285.681) (-6286.243) * [-6284.542] (-6282.975) (-6287.137) (-6289.299) -- 0:16:10
150000 -- (-6283.356) (-6289.057) (-6282.213) [-6282.035] * (-6286.348) [-6282.511] (-6289.411) (-6282.606) -- 0:16:09
Average standard deviation of split frequencies: 0.006883
151000 -- (-6289.954) [-6286.506] (-6284.822) (-6280.218) * [-6280.020] (-6282.003) (-6287.058) (-6280.900) -- 0:16:07
152000 -- (-6285.896) (-6287.559) (-6281.876) [-6278.161] * (-6280.303) (-6285.463) (-6287.130) [-6282.364] -- 0:16:05
153000 -- [-6282.816] (-6280.718) (-6282.243) (-6280.215) * (-6279.526) [-6281.835] (-6286.838) (-6279.858) -- 0:16:03
154000 -- (-6286.513) [-6281.181] (-6287.034) (-6289.604) * (-6286.880) (-6283.926) (-6279.644) [-6283.936] -- 0:16:01
155000 -- (-6292.978) (-6282.895) (-6282.355) [-6293.521] * (-6286.250) (-6281.581) (-6283.213) [-6285.713] -- 0:16:04
Average standard deviation of split frequencies: 0.008763
156000 -- [-6286.624] (-6292.250) (-6287.558) (-6283.030) * [-6275.608] (-6295.006) (-6283.304) (-6289.020) -- 0:16:03
157000 -- [-6285.569] (-6284.727) (-6284.624) (-6278.526) * (-6276.481) (-6283.023) (-6282.114) [-6283.275] -- 0:16:01
158000 -- (-6286.832) (-6283.241) (-6281.971) [-6286.515] * (-6282.186) [-6279.248] (-6285.974) (-6281.729) -- 0:15:59
159000 -- [-6282.658] (-6279.166) (-6277.985) (-6288.532) * [-6276.922] (-6284.152) (-6282.806) (-6289.089) -- 0:15:57
160000 -- [-6277.177] (-6286.148) (-6291.156) (-6285.654) * (-6286.652) (-6284.712) (-6285.536) [-6280.519] -- 0:15:55
Average standard deviation of split frequencies: 0.009389
161000 -- (-6277.887) (-6290.578) (-6280.850) [-6285.251] * [-6276.160] (-6287.048) (-6280.972) (-6294.111) -- 0:15:53
162000 -- [-6275.645] (-6288.838) (-6285.192) (-6280.471) * (-6274.435) (-6283.983) (-6286.231) [-6288.091] -- 0:15:56
163000 -- [-6279.072] (-6281.182) (-6287.542) (-6285.643) * (-6280.415) (-6280.373) [-6291.601] (-6282.782) -- 0:15:55
164000 -- [-6280.075] (-6288.654) (-6286.207) (-6290.576) * [-6275.007] (-6283.110) (-6287.965) (-6286.970) -- 0:15:53
165000 -- (-6294.611) [-6282.732] (-6279.326) (-6280.692) * (-6285.394) (-6276.985) [-6280.077] (-6286.363) -- 0:15:51
Average standard deviation of split frequencies: 0.009655
166000 -- (-6282.193) (-6289.344) [-6287.075] (-6295.628) * [-6275.569] (-6277.878) (-6285.150) (-6290.237) -- 0:15:49
167000 -- (-6280.147) (-6289.622) [-6277.546] (-6282.779) * [-6280.599] (-6277.557) (-6292.631) (-6287.408) -- 0:15:47
168000 -- (-6287.220) [-6281.632] (-6287.786) (-6278.096) * (-6282.798) (-6289.967) (-6282.637) [-6278.209] -- 0:15:45
169000 -- [-6278.380] (-6285.977) (-6296.289) (-6284.829) * (-6276.368) (-6277.024) (-6293.847) [-6286.574] -- 0:15:49
170000 -- [-6281.209] (-6283.568) (-6298.757) (-6279.335) * (-6287.756) (-6282.369) [-6290.530] (-6283.986) -- 0:15:47
Average standard deviation of split frequencies: 0.009115
171000 -- (-6286.603) [-6280.927] (-6286.032) (-6279.566) * (-6285.001) (-6285.003) [-6280.349] (-6277.551) -- 0:15:45
172000 -- (-6292.046) (-6297.313) (-6293.482) [-6274.323] * (-6284.219) (-6277.628) [-6277.575] (-6290.926) -- 0:15:43
173000 -- (-6285.528) (-6280.682) (-6279.668) [-6286.052] * (-6278.651) (-6278.051) (-6283.599) [-6275.479] -- 0:15:41
174000 -- (-6284.959) (-6281.264) (-6282.095) [-6280.688] * (-6279.486) [-6276.230] (-6294.546) (-6285.210) -- 0:15:39
175000 -- (-6288.215) [-6287.686] (-6297.150) (-6276.027) * (-6276.088) (-6285.276) [-6281.598] (-6289.158) -- 0:15:42
Average standard deviation of split frequencies: 0.007500
176000 -- (-6283.547) (-6292.186) (-6279.104) [-6279.919] * (-6284.301) (-6286.888) (-6281.930) [-6278.381] -- 0:15:41
177000 -- [-6280.804] (-6285.416) (-6299.374) (-6285.855) * (-6278.429) [-6292.749] (-6279.784) (-6277.196) -- 0:15:39
178000 -- [-6277.642] (-6274.780) (-6291.049) (-6280.892) * (-6278.920) (-6282.730) (-6289.161) [-6281.852] -- 0:15:37
179000 -- [-6280.278] (-6288.512) (-6299.824) (-6281.852) * (-6283.938) (-6285.275) [-6287.967] (-6279.800) -- 0:15:35
180000 -- (-6284.972) (-6285.458) [-6289.566] (-6288.710) * (-6289.531) (-6282.378) (-6282.258) [-6281.106] -- 0:15:33
Average standard deviation of split frequencies: 0.006784
181000 -- (-6281.790) [-6276.286] (-6283.387) (-6287.139) * (-6282.763) (-6290.150) (-6279.827) [-6279.492] -- 0:15:32
182000 -- (-6282.327) (-6284.033) (-6282.631) [-6279.100] * [-6282.817] (-6294.385) (-6284.200) (-6291.833) -- 0:15:34
183000 -- (-6286.873) (-6277.525) (-6283.166) [-6286.586] * (-6281.990) (-6285.947) (-6286.538) [-6282.892] -- 0:15:33
184000 -- (-6288.943) (-6281.274) [-6283.499] (-6284.154) * (-6288.538) (-6284.585) (-6289.674) [-6288.878] -- 0:15:31
185000 -- (-6283.508) (-6281.160) [-6286.540] (-6281.938) * (-6283.410) (-6285.421) [-6279.958] (-6280.529) -- 0:15:29
Average standard deviation of split frequencies: 0.007096
186000 -- (-6283.864) (-6284.108) (-6287.255) [-6278.422] * (-6281.583) (-6290.942) [-6287.094] (-6284.261) -- 0:15:27
187000 -- (-6281.772) [-6284.686] (-6282.974) (-6277.627) * [-6279.792] (-6284.556) (-6290.543) (-6284.018) -- 0:15:26
188000 -- (-6289.929) [-6283.029] (-6275.738) (-6283.270) * (-6281.187) (-6283.347) [-6284.984] (-6290.254) -- 0:15:24
189000 -- (-6283.958) [-6277.396] (-6287.333) (-6282.819) * [-6281.870] (-6282.984) (-6289.911) (-6292.671) -- 0:15:26
190000 -- (-6281.832) (-6281.969) [-6278.789] (-6276.390) * (-6281.690) (-6284.983) (-6279.383) [-6277.821] -- 0:15:25
Average standard deviation of split frequencies: 0.008159
191000 -- (-6281.793) (-6279.136) (-6285.598) [-6279.231] * (-6278.549) (-6281.632) (-6276.437) [-6286.527] -- 0:15:23
192000 -- (-6285.098) (-6282.460) [-6282.789] (-6293.836) * (-6285.530) (-6287.760) [-6285.692] (-6284.031) -- 0:15:21
193000 -- (-6278.149) (-6286.910) (-6292.144) [-6279.069] * (-6296.338) (-6285.400) [-6285.349] (-6277.510) -- 0:15:19
194000 -- [-6278.445] (-6280.157) (-6293.087) (-6283.794) * (-6285.184) (-6282.306) (-6278.370) [-6278.250] -- 0:15:18
195000 -- [-6276.713] (-6289.845) (-6278.594) (-6280.018) * [-6274.013] (-6284.671) (-6287.638) (-6273.041) -- 0:15:16
Average standard deviation of split frequencies: 0.006494
196000 -- [-6280.309] (-6289.047) (-6288.568) (-6286.988) * (-6286.466) (-6280.292) (-6293.554) [-6279.057] -- 0:15:18
197000 -- (-6281.434) (-6295.754) (-6278.268) [-6281.584] * (-6286.322) (-6288.053) (-6285.779) [-6285.331] -- 0:15:17
198000 -- [-6281.375] (-6284.718) (-6283.508) (-6284.382) * (-6284.598) (-6287.813) [-6277.913] (-6275.892) -- 0:15:15
199000 -- (-6281.183) (-6274.711) [-6279.761] (-6278.285) * (-6275.636) (-6285.862) [-6282.264] (-6279.635) -- 0:15:13
200000 -- [-6282.407] (-6287.020) (-6282.435) (-6283.221) * (-6284.088) (-6291.678) (-6276.947) [-6285.643] -- 0:15:12
Average standard deviation of split frequencies: 0.005403
201000 -- [-6289.512] (-6287.238) (-6284.406) (-6288.090) * (-6276.308) (-6287.854) [-6280.693] (-6289.239) -- 0:15:10
202000 -- (-6278.433) [-6280.820] (-6290.411) (-6285.682) * (-6286.986) (-6286.671) [-6274.622] (-6280.410) -- 0:15:08
203000 -- (-6289.911) (-6278.508) (-6296.436) [-6276.001] * (-6287.018) (-6293.188) [-6283.023] (-6287.014) -- 0:15:06
204000 -- (-6288.984) [-6282.330] (-6295.247) (-6286.285) * (-6279.824) (-6283.775) [-6278.846] (-6285.989) -- 0:15:09
205000 -- (-6293.067) (-6279.397) (-6283.982) [-6281.710] * (-6281.128) (-6296.597) [-6281.911] (-6277.277) -- 0:15:07
Average standard deviation of split frequencies: 0.004806
206000 -- [-6278.965] (-6288.952) (-6283.647) (-6283.417) * (-6277.148) (-6294.126) [-6277.891] (-6294.106) -- 0:15:05
207000 -- (-6296.489) (-6280.649) (-6282.553) [-6279.369] * (-6286.915) (-6280.773) (-6279.137) [-6281.639] -- 0:15:04
208000 -- (-6282.405) (-6285.503) [-6275.635] (-6285.740) * (-6281.486) [-6277.317] (-6280.722) (-6287.157) -- 0:15:02
209000 -- (-6288.511) [-6295.903] (-6279.297) (-6287.637) * [-6279.065] (-6281.918) (-6287.548) (-6287.558) -- 0:15:00
210000 -- (-6297.522) (-6304.291) (-6278.497) [-6278.573] * (-6277.628) (-6284.830) [-6283.187] (-6289.610) -- 0:14:59
Average standard deviation of split frequencies: 0.003804
211000 -- (-6281.731) (-6286.044) [-6288.357] (-6281.642) * [-6279.615] (-6283.448) (-6291.227) (-6276.505) -- 0:15:01
212000 -- [-6282.601] (-6277.036) (-6285.852) (-6290.980) * (-6287.350) (-6278.353) [-6281.769] (-6286.172) -- 0:14:59
213000 -- (-6278.522) [-6285.647] (-6289.631) (-6282.917) * (-6288.482) (-6292.361) [-6281.826] (-6287.684) -- 0:14:57
214000 -- (-6293.139) [-6283.592] (-6286.653) (-6286.440) * (-6296.536) (-6290.901) (-6281.366) [-6275.603] -- 0:14:56
215000 -- (-6285.688) (-6284.346) (-6293.625) [-6284.615] * [-6283.180] (-6289.544) (-6278.247) (-6278.366) -- 0:14:54
Average standard deviation of split frequencies: 0.003710
216000 -- (-6283.694) [-6281.061] (-6287.192) (-6283.635) * (-6286.875) (-6285.654) (-6289.379) [-6281.914] -- 0:14:52
217000 -- (-6283.552) (-6290.060) (-6282.613) [-6278.854] * [-6284.575] (-6276.668) (-6283.870) (-6290.820) -- 0:14:51
218000 -- [-6286.420] (-6280.408) (-6282.682) (-6283.837) * (-6289.783) (-6285.604) [-6282.145] (-6283.980) -- 0:14:49
219000 -- [-6276.430] (-6281.902) (-6287.683) (-6283.129) * (-6280.329) (-6279.376) [-6273.124] (-6285.389) -- 0:14:51
220000 -- (-6281.400) (-6285.200) (-6283.381) [-6278.458] * (-6278.502) (-6285.098) [-6287.407] (-6287.258) -- 0:14:49
Average standard deviation of split frequencies: 0.005768
221000 -- (-6284.101) (-6285.026) (-6287.308) [-6277.106] * (-6279.027) [-6280.372] (-6282.155) (-6278.227) -- 0:14:48
222000 -- (-6294.122) [-6292.651] (-6278.927) (-6279.783) * [-6276.094] (-6280.164) (-6290.967) (-6287.075) -- 0:14:46
223000 -- [-6287.583] (-6283.750) (-6288.761) (-6278.543) * (-6282.042) (-6281.647) (-6282.401) [-6291.350] -- 0:14:45
224000 -- (-6295.713) (-6282.920) [-6284.519] (-6280.012) * (-6285.499) [-6272.358] (-6287.147) (-6283.689) -- 0:14:43
225000 -- (-6280.768) (-6274.849) (-6289.656) [-6276.723] * (-6283.330) [-6287.172] (-6293.243) (-6287.716) -- 0:14:45
Average standard deviation of split frequencies: 0.007509
226000 -- (-6279.622) [-6283.708] (-6291.410) (-6286.998) * (-6285.580) [-6280.209] (-6281.103) (-6286.894) -- 0:14:43
227000 -- (-6280.827) [-6278.271] (-6278.893) (-6284.944) * (-6278.458) [-6281.763] (-6279.080) (-6282.682) -- 0:14:41
228000 -- (-6280.579) (-6284.000) (-6284.572) [-6284.628] * (-6283.743) (-6282.607) [-6277.342] (-6288.701) -- 0:14:40
229000 -- (-6277.671) (-6277.688) [-6287.737] (-6288.912) * (-6291.783) (-6285.955) (-6288.177) [-6280.559] -- 0:14:38
230000 -- (-6287.702) (-6300.037) (-6282.272) [-6284.478] * (-6298.737) [-6280.100] (-6286.121) (-6286.017) -- 0:14:37
Average standard deviation of split frequencies: 0.005518
231000 -- (-6280.995) [-6288.835] (-6291.516) (-6286.544) * [-6282.372] (-6275.909) (-6291.337) (-6277.804) -- 0:14:35
232000 -- [-6278.280] (-6280.829) (-6280.709) (-6281.301) * (-6286.944) (-6286.718) [-6284.223] (-6280.987) -- 0:14:37
233000 -- (-6279.235) [-6274.658] (-6285.735) (-6284.227) * (-6279.237) (-6288.938) [-6276.972] (-6285.459) -- 0:14:35
234000 -- (-6284.086) [-6277.155] (-6284.828) (-6284.219) * (-6281.121) (-6283.775) (-6283.465) [-6292.115] -- 0:14:34
235000 -- (-6286.044) [-6283.837] (-6280.267) (-6277.662) * [-6283.083] (-6279.960) (-6291.982) (-6281.092) -- 0:14:32
Average standard deviation of split frequencies: 0.008190
236000 -- (-6278.726) [-6276.846] (-6287.810) (-6279.576) * (-6285.064) [-6279.047] (-6276.942) (-6287.024) -- 0:14:30
237000 -- (-6279.963) (-6282.700) (-6281.844) [-6284.086] * [-6288.268] (-6276.349) (-6284.024) (-6288.087) -- 0:14:29
238000 -- (-6294.019) (-6280.917) (-6290.938) [-6278.044] * (-6289.062) (-6277.915) (-6282.814) [-6284.395] -- 0:14:27
239000 -- (-6290.169) [-6280.088] (-6285.150) (-6282.193) * (-6276.749) [-6288.898] (-6295.905) (-6286.688) -- 0:14:29
240000 -- (-6294.074) [-6284.257] (-6290.437) (-6288.654) * [-6279.707] (-6285.756) (-6290.648) (-6284.000) -- 0:14:27
Average standard deviation of split frequencies: 0.009598
241000 -- (-6286.984) (-6285.420) [-6279.651] (-6280.670) * (-6287.876) (-6283.186) [-6275.563] (-6289.792) -- 0:14:26
242000 -- (-6282.662) [-6279.409] (-6289.547) (-6276.517) * (-6289.641) [-6280.837] (-6278.811) (-6289.243) -- 0:14:24
243000 -- [-6286.971] (-6283.807) (-6277.371) (-6280.430) * (-6294.405) [-6279.369] (-6279.331) (-6281.405) -- 0:14:22
244000 -- (-6282.078) [-6282.872] (-6277.656) (-6275.769) * (-6290.759) [-6276.745] (-6292.694) (-6298.092) -- 0:14:21
245000 -- (-6287.125) (-6279.570) [-6280.889] (-6283.722) * (-6293.360) (-6280.638) (-6288.069) [-6287.525] -- 0:14:19
Average standard deviation of split frequencies: 0.007857
246000 -- (-6282.553) (-6289.075) [-6283.405] (-6281.168) * (-6295.515) (-6294.081) (-6285.002) [-6287.245] -- 0:14:21
247000 -- (-6285.801) [-6279.464] (-6279.068) (-6285.781) * (-6291.765) [-6288.185] (-6289.628) (-6285.989) -- 0:14:19
248000 -- (-6290.484) (-6283.400) [-6278.657] (-6280.911) * (-6297.457) [-6274.881] (-6289.330) (-6282.647) -- 0:14:18
249000 -- (-6289.032) [-6281.339] (-6285.919) (-6286.853) * (-6290.652) [-6288.393] (-6282.907) (-6281.737) -- 0:14:16
250000 -- [-6281.475] (-6279.508) (-6287.122) (-6283.016) * (-6284.844) (-6274.713) [-6285.408] (-6277.431) -- 0:14:15
Average standard deviation of split frequencies: 0.007334
251000 -- (-6281.302) [-6279.244] (-6284.725) (-6279.283) * (-6291.029) (-6281.209) (-6280.280) [-6289.401] -- 0:14:13
252000 -- (-6297.563) (-6287.852) (-6281.189) [-6276.907] * [-6281.242] (-6290.960) (-6283.491) (-6288.006) -- 0:14:14
253000 -- (-6294.180) (-6286.287) (-6284.274) [-6293.196] * (-6284.325) [-6274.030] (-6273.965) (-6289.597) -- 0:14:13
254000 -- (-6297.750) [-6280.977] (-6281.035) (-6278.073) * [-6285.215] (-6279.499) (-6290.342) (-6286.804) -- 0:14:11
255000 -- (-6280.911) (-6278.210) [-6274.878] (-6288.893) * (-6288.912) (-6281.198) (-6277.119) [-6287.476] -- 0:14:10
Average standard deviation of split frequencies: 0.009575
256000 -- (-6287.439) (-6282.807) [-6281.136] (-6294.447) * (-6293.839) [-6283.641] (-6283.650) (-6285.389) -- 0:14:08
257000 -- (-6281.098) (-6283.462) [-6277.617] (-6294.369) * [-6280.549] (-6279.055) (-6280.235) (-6277.926) -- 0:14:07
258000 -- (-6282.130) [-6283.681] (-6280.688) (-6284.784) * [-6285.994] (-6282.472) (-6292.109) (-6275.970) -- 0:14:05
259000 -- (-6285.087) [-6278.212] (-6279.046) (-6282.151) * (-6300.765) [-6276.788] (-6274.387) (-6282.857) -- 0:14:06
260000 -- (-6286.077) (-6284.804) (-6288.729) [-6276.001] * (-6289.446) (-6282.162) [-6280.957] (-6281.712) -- 0:14:05
Average standard deviation of split frequencies: 0.008681
261000 -- (-6283.102) (-6289.831) [-6281.968] (-6287.330) * (-6284.867) [-6277.234] (-6283.340) (-6277.383) -- 0:14:03
262000 -- (-6286.566) (-6282.648) [-6283.091] (-6284.488) * (-6279.500) (-6275.364) [-6280.944] (-6277.253) -- 0:14:02
263000 -- (-6288.312) (-6279.625) (-6279.874) [-6278.712] * (-6292.623) [-6282.370] (-6289.867) (-6284.353) -- 0:14:00
264000 -- (-6285.883) (-6282.762) (-6290.753) [-6284.814] * (-6291.949) (-6283.846) (-6285.974) [-6280.600] -- 0:13:59
265000 -- [-6281.799] (-6291.809) (-6284.225) (-6282.915) * [-6279.305] (-6286.284) (-6290.738) (-6280.201) -- 0:13:57
Average standard deviation of split frequencies: 0.008861
266000 -- (-6282.667) (-6293.169) [-6280.150] (-6287.101) * (-6280.610) [-6277.741] (-6284.764) (-6285.154) -- 0:13:56
267000 -- (-6280.127) (-6281.528) [-6275.142] (-6290.804) * (-6281.052) (-6282.701) [-6283.672] (-6284.015) -- 0:13:57
268000 -- (-6285.824) (-6284.735) (-6276.753) [-6280.154] * (-6281.735) (-6280.729) (-6280.514) [-6282.281] -- 0:13:55
269000 -- (-6292.723) [-6285.082] (-6283.747) (-6285.680) * (-6289.381) (-6290.679) (-6281.910) [-6281.091] -- 0:13:54
270000 -- [-6281.789] (-6284.088) (-6285.126) (-6290.981) * (-6282.266) (-6288.599) [-6286.434] (-6287.496) -- 0:13:52
Average standard deviation of split frequencies: 0.007837
271000 -- (-6283.501) [-6285.640] (-6286.670) (-6281.558) * [-6281.077] (-6280.893) (-6293.404) (-6285.490) -- 0:13:51
272000 -- (-6284.122) (-6289.613) [-6285.136] (-6286.231) * (-6295.130) [-6280.043] (-6294.368) (-6280.239) -- 0:13:49
273000 -- (-6292.840) (-6295.894) [-6284.110] (-6291.312) * [-6288.302] (-6282.736) (-6294.191) (-6280.877) -- 0:13:48
274000 -- (-6286.635) (-6289.203) (-6278.175) [-6279.174] * (-6285.017) (-6282.403) (-6291.609) [-6281.124] -- 0:13:49
275000 -- (-6288.067) (-6275.864) (-6280.701) [-6280.078] * (-6281.669) (-6282.804) [-6283.728] (-6276.927) -- 0:13:47
Average standard deviation of split frequencies: 0.007515
276000 -- (-6295.961) (-6280.806) [-6279.900] (-6290.216) * [-6279.627] (-6284.054) (-6282.221) (-6282.004) -- 0:13:46
277000 -- (-6283.358) (-6285.758) [-6285.721] (-6295.553) * [-6286.935] (-6275.551) (-6287.424) (-6282.729) -- 0:13:44
278000 -- [-6282.033] (-6284.211) (-6285.586) (-6289.049) * (-6294.333) [-6279.523] (-6279.547) (-6284.373) -- 0:13:43
279000 -- (-6295.966) (-6278.691) [-6280.494] (-6278.498) * (-6288.704) (-6289.799) [-6286.121] (-6278.123) -- 0:13:41
280000 -- (-6292.365) (-6277.176) [-6283.550] (-6286.129) * [-6282.133] (-6279.299) (-6294.962) (-6278.139) -- 0:13:40
Average standard deviation of split frequencies: 0.009238
281000 -- (-6289.543) (-6285.571) [-6283.940] (-6283.917) * (-6285.236) [-6281.293] (-6289.883) (-6285.619) -- 0:13:38
282000 -- (-6280.566) [-6286.565] (-6296.917) (-6284.223) * (-6283.326) [-6283.485] (-6286.508) (-6287.159) -- 0:13:39
283000 -- [-6281.911] (-6278.997) (-6287.275) (-6277.322) * (-6283.085) (-6284.411) (-6290.063) [-6281.792] -- 0:13:38
284000 -- (-6286.705) (-6287.069) [-6282.367] (-6282.698) * (-6282.734) (-6278.142) [-6288.124] (-6276.553) -- 0:13:36
285000 -- [-6277.616] (-6286.348) (-6284.574) (-6280.801) * (-6276.061) [-6277.395] (-6280.688) (-6285.073) -- 0:13:35
Average standard deviation of split frequencies: 0.008406
286000 -- (-6293.027) [-6285.806] (-6278.043) (-6279.369) * [-6279.798] (-6281.496) (-6284.069) (-6283.236) -- 0:13:33
287000 -- (-6289.233) (-6282.243) (-6283.312) [-6277.153] * (-6283.391) [-6276.950] (-6279.056) (-6288.801) -- 0:13:32
288000 -- (-6290.069) (-6283.239) (-6285.858) [-6278.939] * (-6284.241) (-6285.869) [-6281.554] (-6289.495) -- 0:13:30
289000 -- [-6284.877] (-6285.855) (-6280.341) (-6284.519) * (-6278.200) (-6285.181) (-6286.930) [-6281.380] -- 0:13:29
290000 -- (-6288.935) (-6277.046) [-6282.965] (-6282.638) * (-6284.961) (-6282.218) [-6278.082] (-6289.141) -- 0:13:30
Average standard deviation of split frequencies: 0.007785
291000 -- [-6281.095] (-6279.503) (-6286.136) (-6282.980) * [-6272.940] (-6276.071) (-6280.043) (-6283.883) -- 0:13:28
292000 -- (-6280.450) (-6280.418) (-6286.624) [-6278.597] * [-6280.122] (-6288.418) (-6274.282) (-6279.074) -- 0:13:27
293000 -- (-6285.331) [-6283.062] (-6293.504) (-6289.869) * (-6277.107) (-6280.223) (-6290.553) [-6279.342] -- 0:13:25
294000 -- [-6285.597] (-6287.653) (-6282.950) (-6286.824) * [-6278.827] (-6280.358) (-6282.416) (-6288.823) -- 0:13:24
295000 -- [-6277.008] (-6282.637) (-6290.078) (-6281.981) * (-6285.375) (-6288.078) (-6283.072) [-6275.494] -- 0:13:22
Average standard deviation of split frequencies: 0.006848
296000 -- (-6281.515) (-6286.898) [-6277.709] (-6293.592) * (-6280.670) (-6283.806) [-6282.981] (-6289.600) -- 0:13:23
297000 -- (-6283.720) (-6285.329) [-6283.906] (-6285.571) * (-6280.948) (-6284.215) [-6277.277] (-6280.482) -- 0:13:22
298000 -- (-6282.983) (-6292.413) [-6283.442] (-6277.553) * (-6281.543) [-6288.077] (-6290.299) (-6279.796) -- 0:13:20
299000 -- (-6279.012) (-6288.940) (-6284.826) [-6280.600] * (-6286.498) (-6281.146) (-6292.379) [-6286.615] -- 0:13:19
300000 -- [-6279.551] (-6292.323) (-6275.481) (-6281.860) * (-6289.145) (-6275.150) (-6292.950) [-6279.892] -- 0:13:18
Average standard deviation of split frequencies: 0.006585
301000 -- [-6284.799] (-6281.966) (-6281.459) (-6282.097) * [-6281.183] (-6283.307) (-6283.340) (-6305.888) -- 0:13:16
302000 -- (-6283.591) (-6285.400) (-6289.980) [-6283.595] * (-6280.030) (-6287.044) [-6283.476] (-6289.620) -- 0:13:15
303000 -- (-6281.196) (-6285.080) [-6294.244] (-6287.271) * (-6294.215) (-6283.191) [-6278.215] (-6282.863) -- 0:13:15
304000 -- (-6285.808) (-6287.499) (-6292.175) [-6278.439] * (-6289.845) (-6279.372) (-6279.591) [-6276.768] -- 0:13:14
305000 -- (-6286.728) (-6290.708) [-6282.502] (-6281.399) * (-6298.531) (-6280.127) [-6289.810] (-6274.490) -- 0:13:12
Average standard deviation of split frequencies: 0.005700
306000 -- (-6280.865) (-6292.582) [-6281.777] (-6282.779) * (-6287.255) (-6295.239) [-6279.111] (-6287.364) -- 0:13:11
307000 -- (-6286.801) [-6282.454] (-6283.626) (-6292.338) * (-6278.880) (-6298.304) [-6286.489] (-6291.880) -- 0:13:10
308000 -- (-6279.529) (-6281.054) [-6275.267] (-6283.152) * (-6287.996) (-6285.632) (-6277.458) [-6281.956] -- 0:13:08
309000 -- (-6286.309) (-6286.892) [-6284.421] (-6284.366) * (-6283.225) (-6293.363) [-6278.027] (-6281.066) -- 0:13:07
310000 -- (-6284.029) (-6284.165) (-6283.894) [-6282.174] * (-6275.823) (-6279.282) [-6283.050] (-6290.933) -- 0:13:07
Average standard deviation of split frequencies: 0.004704
311000 -- (-6289.141) [-6283.168] (-6277.152) (-6280.026) * [-6282.092] (-6293.152) (-6288.862) (-6289.270) -- 0:13:06
312000 -- (-6276.678) (-6280.386) (-6292.155) [-6280.742] * (-6283.496) [-6283.353] (-6275.040) (-6281.004) -- 0:13:05
313000 -- (-6290.194) (-6281.699) (-6279.966) [-6284.273] * [-6282.723] (-6283.816) (-6284.820) (-6286.815) -- 0:13:03
314000 -- (-6289.052) [-6280.676] (-6282.863) (-6279.275) * (-6285.266) (-6282.953) [-6278.157] (-6286.497) -- 0:13:02
315000 -- (-6290.526) (-6279.835) [-6285.929] (-6278.500) * [-6279.935] (-6290.286) (-6285.848) (-6285.242) -- 0:13:00
Average standard deviation of split frequencies: 0.004923
316000 -- [-6281.427] (-6279.122) (-6283.375) (-6279.303) * [-6285.475] (-6277.410) (-6283.369) (-6282.638) -- 0:13:01
317000 -- [-6285.173] (-6282.240) (-6279.024) (-6284.582) * (-6283.755) (-6291.165) [-6279.258] (-6285.291) -- 0:12:59
318000 -- (-6288.342) (-6279.920) [-6281.876] (-6285.380) * (-6283.420) (-6281.814) [-6275.880] (-6287.557) -- 0:12:58
319000 -- (-6277.933) (-6273.985) (-6285.615) [-6280.944] * (-6285.280) (-6291.348) [-6279.584] (-6281.709) -- 0:12:57
320000 -- (-6280.244) [-6287.063] (-6294.114) (-6291.748) * (-6281.953) [-6284.213] (-6281.490) (-6277.726) -- 0:12:55
Average standard deviation of split frequencies: 0.003675
321000 -- (-6282.113) [-6283.907] (-6291.483) (-6288.797) * (-6279.253) [-6280.466] (-6291.510) (-6287.974) -- 0:12:54
322000 -- (-6277.286) (-6290.105) [-6281.490] (-6284.377) * [-6283.597] (-6282.158) (-6288.310) (-6291.777) -- 0:12:52
323000 -- [-6284.284] (-6283.020) (-6279.218) (-6281.231) * (-6281.994) [-6280.757] (-6284.770) (-6296.654) -- 0:12:53
324000 -- [-6286.971] (-6287.260) (-6286.164) (-6293.709) * (-6282.624) (-6277.260) [-6282.753] (-6287.138) -- 0:12:51
325000 -- (-6282.616) (-6298.600) [-6286.033] (-6282.605) * (-6286.396) (-6286.543) [-6283.908] (-6284.877) -- 0:12:50
Average standard deviation of split frequencies: 0.002169
326000 -- [-6288.138] (-6278.760) (-6281.431) (-6279.728) * (-6278.803) (-6285.379) [-6282.500] (-6278.254) -- 0:12:49
327000 -- (-6286.147) [-6284.588] (-6286.063) (-6284.850) * [-6271.728] (-6278.133) (-6278.928) (-6279.880) -- 0:12:47
328000 -- [-6272.825] (-6275.164) (-6275.916) (-6275.770) * (-6285.927) [-6281.739] (-6280.962) (-6286.908) -- 0:12:46
329000 -- (-6290.484) [-6285.668] (-6275.390) (-6288.708) * [-6280.312] (-6286.939) (-6278.143) (-6277.432) -- 0:12:44
330000 -- (-6288.161) (-6284.923) [-6280.206] (-6293.498) * (-6280.745) (-6279.072) [-6279.569] (-6282.933) -- 0:12:45
Average standard deviation of split frequencies: 0.002851
331000 -- [-6293.142] (-6283.895) (-6284.800) (-6280.313) * [-6277.816] (-6282.875) (-6281.272) (-6285.857) -- 0:12:43
332000 -- [-6278.827] (-6280.776) (-6276.603) (-6280.102) * (-6276.494) [-6279.276] (-6280.507) (-6277.512) -- 0:12:42
333000 -- (-6288.560) (-6280.381) (-6291.676) [-6283.964] * [-6280.244] (-6282.056) (-6285.872) (-6280.616) -- 0:12:41
334000 -- (-6280.043) [-6285.121] (-6294.282) (-6283.143) * (-6291.756) (-6280.140) (-6284.780) [-6287.119] -- 0:12:39
335000 -- (-6284.808) [-6277.856] (-6295.122) (-6282.960) * (-6280.420) (-6285.492) (-6283.772) [-6279.098] -- 0:12:38
Average standard deviation of split frequencies: 0.001964
336000 -- (-6281.210) (-6281.451) (-6281.932) [-6282.481] * (-6290.228) (-6279.276) (-6280.418) [-6288.149] -- 0:12:36
337000 -- (-6282.160) [-6272.503] (-6286.146) (-6283.453) * (-6292.957) (-6285.889) (-6277.441) [-6279.978] -- 0:12:37
338000 -- (-6282.544) [-6278.725] (-6280.427) (-6274.574) * (-6287.903) [-6279.416] (-6302.880) (-6286.415) -- 0:12:36
339000 -- (-6293.437) (-6280.096) (-6274.354) [-6282.933] * [-6276.820] (-6277.187) (-6280.771) (-6294.530) -- 0:12:34
340000 -- (-6286.446) (-6282.387) (-6291.116) [-6277.178] * [-6285.171] (-6279.289) (-6281.199) (-6281.321) -- 0:12:33
Average standard deviation of split frequencies: 0.002491
341000 -- [-6278.237] (-6281.019) (-6279.212) (-6288.143) * (-6292.697) (-6282.047) [-6278.605] (-6279.919) -- 0:12:31
342000 -- (-6283.730) (-6285.029) [-6284.845] (-6289.091) * (-6281.415) (-6285.414) (-6287.081) [-6284.005] -- 0:12:30
343000 -- (-6293.600) (-6281.214) (-6283.387) [-6288.287] * (-6285.158) (-6286.405) [-6284.728] (-6284.468) -- 0:12:28
344000 -- (-6292.731) (-6287.087) [-6275.606] (-6281.817) * [-6289.966] (-6292.472) (-6287.229) (-6278.722) -- 0:12:27
345000 -- (-6281.802) (-6286.851) (-6281.980) [-6277.600] * [-6279.825] (-6292.717) (-6279.910) (-6284.041) -- 0:12:28
Average standard deviation of split frequencies: 0.003951
346000 -- (-6286.139) (-6285.335) (-6299.006) [-6280.503] * (-6286.317) (-6299.429) (-6283.161) [-6280.194] -- 0:12:26
347000 -- [-6279.815] (-6282.269) (-6298.663) (-6282.878) * (-6284.063) (-6291.328) (-6287.888) [-6284.813] -- 0:12:25
348000 -- (-6283.968) (-6288.212) (-6288.989) [-6277.057] * (-6282.555) (-6294.195) [-6284.219] (-6289.239) -- 0:12:23
349000 -- (-6282.627) (-6288.521) [-6277.508] (-6285.487) * (-6293.761) (-6297.931) [-6283.004] (-6283.539) -- 0:12:22
350000 -- (-6285.571) (-6286.040) (-6291.574) [-6286.968] * (-6284.729) (-6286.436) (-6285.562) [-6282.960] -- 0:12:21
Average standard deviation of split frequencies: 0.004167
351000 -- (-6277.147) (-6278.883) (-6281.432) [-6284.929] * (-6303.063) [-6285.259] (-6279.294) (-6284.874) -- 0:12:19
352000 -- (-6280.160) (-6275.979) (-6284.927) [-6279.316] * (-6289.794) (-6290.410) (-6302.154) [-6281.327] -- 0:12:20
353000 -- (-6277.384) (-6284.160) (-6308.012) [-6281.935] * [-6286.603] (-6286.246) (-6283.659) (-6290.623) -- 0:12:18
354000 -- (-6284.226) (-6281.988) (-6285.056) [-6280.351] * (-6293.337) (-6282.328) (-6291.857) [-6282.637] -- 0:12:17
355000 -- (-6284.541) (-6282.562) (-6280.805) [-6285.172] * [-6284.393] (-6297.983) (-6294.640) (-6286.225) -- 0:12:15
Average standard deviation of split frequencies: 0.006621
356000 -- (-6281.671) (-6278.751) (-6286.208) [-6282.549] * (-6289.142) [-6291.551] (-6290.838) (-6287.934) -- 0:12:14
357000 -- (-6292.295) (-6276.921) [-6281.350] (-6276.639) * (-6285.094) (-6294.113) (-6293.139) [-6282.059] -- 0:12:13
358000 -- (-6285.114) (-6278.797) [-6278.505] (-6283.419) * [-6285.425] (-6295.656) (-6289.695) (-6282.840) -- 0:12:11
359000 -- (-6282.043) [-6281.575] (-6283.808) (-6283.827) * (-6284.848) [-6278.713] (-6289.187) (-6287.669) -- 0:12:12
360000 -- (-6288.724) (-6285.298) (-6291.809) [-6283.401] * (-6281.464) (-6284.690) (-6279.920) [-6279.865] -- 0:12:10
Average standard deviation of split frequencies: 0.007712
361000 -- (-6296.818) [-6280.833] (-6278.662) (-6288.301) * (-6275.193) (-6284.907) (-6287.178) [-6284.210] -- 0:12:09
362000 -- (-6286.279) [-6287.155] (-6294.171) (-6281.991) * (-6286.943) (-6277.301) (-6290.624) [-6286.296] -- 0:12:07
363000 -- (-6290.192) (-6285.114) [-6276.868] (-6285.101) * (-6292.158) [-6276.948] (-6289.705) (-6278.931) -- 0:12:06
364000 -- (-6289.863) [-6286.606] (-6289.445) (-6278.975) * (-6293.922) (-6279.811) (-6291.578) [-6278.626] -- 0:12:05
365000 -- (-6290.369) [-6280.350] (-6274.635) (-6294.018) * (-6301.492) (-6282.137) (-6279.403) [-6275.615] -- 0:12:03
Average standard deviation of split frequencies: 0.007342
366000 -- (-6285.274) [-6279.152] (-6276.680) (-6294.214) * (-6290.956) [-6280.100] (-6286.593) (-6278.911) -- 0:12:04
367000 -- (-6293.355) (-6282.999) (-6283.005) [-6283.901] * (-6287.983) (-6287.619) (-6292.761) [-6276.031] -- 0:12:02
368000 -- (-6284.790) (-6290.522) [-6280.911] (-6285.048) * (-6292.124) [-6284.583] (-6287.384) (-6285.778) -- 0:12:01
369000 -- (-6290.808) [-6275.584] (-6289.965) (-6281.969) * [-6281.647] (-6288.777) (-6278.583) (-6285.261) -- 0:11:59
370000 -- (-6285.053) (-6283.029) (-6293.631) [-6281.562] * (-6292.449) [-6280.519] (-6280.949) (-6291.118) -- 0:11:58
Average standard deviation of split frequencies: 0.008012
371000 -- [-6285.045] (-6276.745) (-6287.734) (-6285.501) * (-6291.960) [-6273.772] (-6296.863) (-6285.434) -- 0:11:57
372000 -- (-6278.335) [-6277.446] (-6288.356) (-6278.770) * (-6291.841) [-6275.718] (-6283.261) (-6276.369) -- 0:11:55
373000 -- (-6284.094) (-6286.815) [-6274.561] (-6291.835) * (-6282.987) [-6279.406] (-6290.639) (-6298.805) -- 0:11:56
374000 -- [-6281.077] (-6288.226) (-6284.070) (-6286.408) * (-6289.525) [-6282.470] (-6285.617) (-6288.253) -- 0:11:54
375000 -- (-6281.254) (-6288.709) (-6280.999) [-6289.532] * (-6282.955) [-6280.228] (-6287.652) (-6281.846) -- 0:11:53
Average standard deviation of split frequencies: 0.007773
376000 -- (-6284.478) (-6285.316) (-6285.725) [-6278.524] * (-6289.551) (-6279.710) [-6282.106] (-6285.391) -- 0:11:51
377000 -- [-6286.303] (-6283.981) (-6284.728) (-6285.699) * (-6287.192) (-6284.035) (-6288.803) [-6280.208] -- 0:11:50
378000 -- [-6290.584] (-6283.289) (-6282.777) (-6287.989) * [-6281.361] (-6283.222) (-6299.664) (-6283.017) -- 0:11:50
379000 -- (-6289.686) (-6283.828) [-6288.424] (-6285.658) * (-6293.923) (-6279.002) (-6285.490) [-6281.183] -- 0:11:49
380000 -- [-6278.749] (-6279.219) (-6293.017) (-6279.124) * (-6291.796) (-6278.646) [-6273.358] (-6286.723) -- 0:11:48
Average standard deviation of split frequencies: 0.006935
381000 -- (-6285.924) [-6287.885] (-6290.500) (-6281.596) * (-6293.029) [-6285.004] (-6286.121) (-6282.478) -- 0:11:46
382000 -- (-6287.903) (-6294.344) [-6281.779] (-6286.268) * (-6292.347) (-6282.249) [-6283.636] (-6292.762) -- 0:11:45
383000 -- (-6288.348) (-6287.771) (-6282.547) [-6283.338] * (-6283.579) [-6287.409] (-6293.343) (-6277.441) -- 0:11:43
384000 -- (-6279.684) (-6289.663) (-6290.318) [-6283.632] * (-6283.537) (-6285.604) (-6289.288) [-6281.274] -- 0:11:44
385000 -- (-6283.592) (-6288.791) [-6281.254] (-6275.250) * (-6281.097) (-6291.652) (-6284.578) [-6279.574] -- 0:11:42
Average standard deviation of split frequencies: 0.005251
386000 -- (-6283.551) (-6286.076) [-6277.860] (-6280.957) * (-6287.605) (-6292.709) [-6288.408] (-6278.056) -- 0:11:41
387000 -- (-6283.658) (-6283.841) [-6275.186] (-6290.741) * (-6291.756) [-6281.028] (-6287.181) (-6280.936) -- 0:11:40
388000 -- [-6283.621] (-6281.193) (-6288.205) (-6290.794) * (-6286.275) [-6278.941] (-6280.506) (-6283.957) -- 0:11:38
389000 -- [-6287.687] (-6287.423) (-6287.944) (-6284.348) * (-6281.844) (-6284.572) [-6285.198] (-6280.043) -- 0:11:37
390000 -- (-6285.002) (-6290.880) (-6281.240) [-6282.251] * [-6283.127] (-6288.513) (-6286.412) (-6286.208) -- 0:11:37
Average standard deviation of split frequencies: 0.005551
391000 -- (-6283.341) (-6291.725) (-6279.117) [-6283.560] * (-6284.995) (-6288.536) (-6281.887) [-6279.940] -- 0:11:36
392000 -- [-6280.274] (-6280.623) (-6284.904) (-6285.265) * (-6279.194) [-6275.083] (-6285.254) (-6284.855) -- 0:11:34
393000 -- [-6282.996] (-6283.559) (-6282.551) (-6285.287) * (-6280.671) (-6290.191) [-6279.479] (-6294.386) -- 0:11:33
394000 -- (-6275.667) [-6281.415] (-6289.114) (-6282.755) * [-6276.631] (-6288.114) (-6279.695) (-6283.133) -- 0:11:32
395000 -- (-6285.663) [-6275.246] (-6280.759) (-6293.019) * (-6280.784) [-6284.932] (-6284.122) (-6288.426) -- 0:11:30
Average standard deviation of split frequencies: 0.005357
396000 -- (-6283.853) (-6280.483) (-6286.645) [-6280.496] * (-6281.855) (-6285.910) [-6277.688] (-6285.725) -- 0:11:29
397000 -- (-6280.739) [-6282.023] (-6281.202) (-6281.355) * (-6281.391) (-6290.448) [-6276.860] (-6290.185) -- 0:11:29
398000 -- (-6278.701) (-6281.546) (-6287.371) [-6287.151] * (-6281.944) (-6278.757) [-6285.926] (-6291.602) -- 0:11:28
399000 -- (-6277.302) [-6286.548] (-6281.351) (-6287.521) * (-6287.171) (-6279.056) [-6290.738] (-6292.993) -- 0:11:26
400000 -- (-6289.582) [-6286.723] (-6280.294) (-6292.871) * [-6281.154] (-6281.692) (-6289.969) (-6287.132) -- 0:11:25
Average standard deviation of split frequencies: 0.004942
401000 -- (-6286.668) (-6278.514) [-6285.136] (-6288.885) * (-6286.857) [-6278.851] (-6284.574) (-6289.092) -- 0:11:24
402000 -- (-6286.440) (-6289.903) (-6287.126) [-6280.345] * [-6278.125] (-6285.873) (-6285.721) (-6291.367) -- 0:11:22
403000 -- [-6282.365] (-6292.864) (-6297.204) (-6290.898) * (-6289.669) (-6292.457) [-6280.541] (-6282.991) -- 0:11:21
404000 -- (-6282.336) [-6285.750] (-6286.683) (-6296.316) * (-6280.766) [-6281.791] (-6282.978) (-6300.718) -- 0:11:21
405000 -- (-6291.658) (-6287.612) [-6290.585] (-6287.344) * (-6280.763) (-6277.281) (-6301.529) [-6278.775] -- 0:11:20
Average standard deviation of split frequencies: 0.005225
406000 -- (-6280.979) (-6284.025) [-6277.008] (-6281.168) * [-6273.596] (-6286.895) (-6282.386) (-6280.121) -- 0:11:18
407000 -- [-6280.180] (-6286.795) (-6285.388) (-6277.817) * (-6278.250) (-6284.835) [-6286.056] (-6288.740) -- 0:11:17
408000 -- (-6288.158) (-6286.183) [-6277.854] (-6287.755) * (-6285.050) [-6287.355] (-6288.403) (-6291.890) -- 0:11:16
409000 -- (-6282.902) (-6289.962) [-6282.730] (-6288.951) * (-6279.938) [-6281.344] (-6291.956) (-6293.503) -- 0:11:14
410000 -- (-6292.530) [-6277.306] (-6276.404) (-6279.485) * (-6288.906) [-6280.578] (-6280.855) (-6284.616) -- 0:11:13
Average standard deviation of split frequencies: 0.005166
411000 -- (-6289.394) (-6284.341) [-6286.318] (-6295.331) * (-6281.669) (-6285.096) [-6289.546] (-6289.507) -- 0:11:13
412000 -- (-6281.029) (-6281.585) (-6276.835) [-6292.041] * (-6278.241) (-6287.322) [-6289.527] (-6279.005) -- 0:11:12
413000 -- (-6278.389) (-6284.511) [-6279.238] (-6282.378) * (-6280.082) (-6282.187) [-6281.195] (-6285.805) -- 0:11:10
414000 -- (-6285.918) [-6289.155] (-6285.395) (-6294.257) * [-6283.912] (-6281.205) (-6278.150) (-6282.308) -- 0:11:09
415000 -- (-6289.609) (-6285.420) [-6285.383] (-6285.095) * (-6286.980) (-6289.703) (-6279.334) [-6282.830] -- 0:11:08
Average standard deviation of split frequencies: 0.005099
416000 -- (-6290.532) (-6283.149) [-6283.478] (-6278.727) * (-6282.779) [-6285.497] (-6290.354) (-6279.394) -- 0:11:06
417000 -- [-6277.442] (-6287.727) (-6292.048) (-6282.170) * (-6290.086) (-6280.727) (-6280.034) [-6280.882] -- 0:11:05
418000 -- [-6287.663] (-6282.191) (-6275.013) (-6283.953) * (-6281.852) (-6282.023) [-6283.637] (-6280.082) -- 0:11:04
419000 -- (-6291.069) (-6282.995) (-6279.277) [-6274.586] * (-6288.738) (-6282.676) (-6287.344) [-6284.296] -- 0:11:04
420000 -- (-6288.954) (-6286.530) (-6294.744) [-6284.276] * (-6291.844) [-6276.488] (-6282.435) (-6288.331) -- 0:11:02
Average standard deviation of split frequencies: 0.005155
421000 -- (-6280.578) (-6282.851) [-6288.266] (-6287.820) * (-6291.164) [-6295.599] (-6288.932) (-6277.640) -- 0:11:01
422000 -- (-6286.388) (-6280.253) (-6288.561) [-6287.875] * [-6280.637] (-6293.850) (-6288.401) (-6293.375) -- 0:11:00
423000 -- (-6283.966) (-6289.028) [-6287.301] (-6288.926) * [-6285.460] (-6284.313) (-6297.115) (-6286.626) -- 0:10:58
424000 -- [-6279.858] (-6279.692) (-6279.489) (-6286.553) * (-6293.082) (-6280.569) [-6282.420] (-6286.391) -- 0:10:57
425000 -- (-6279.438) [-6282.518] (-6278.870) (-6290.651) * (-6278.683) (-6277.152) (-6295.888) [-6273.210] -- 0:10:56
Average standard deviation of split frequencies: 0.005090
426000 -- (-6277.854) [-6279.386] (-6280.742) (-6291.300) * (-6286.841) (-6279.805) [-6283.045] (-6289.989) -- 0:10:56
427000 -- [-6282.327] (-6280.595) (-6278.301) (-6284.099) * (-6284.971) [-6283.405] (-6283.695) (-6283.762) -- 0:10:54
428000 -- (-6287.695) [-6279.255] (-6297.130) (-6278.996) * [-6278.813] (-6288.747) (-6283.859) (-6291.420) -- 0:10:53
429000 -- [-6283.189] (-6286.764) (-6285.443) (-6286.864) * (-6278.884) (-6278.020) (-6284.491) [-6280.852] -- 0:10:52
430000 -- (-6297.863) [-6289.180] (-6288.960) (-6286.846) * [-6278.427] (-6290.263) (-6280.513) (-6279.116) -- 0:10:50
Average standard deviation of split frequencies: 0.004488
431000 -- (-6288.695) (-6290.152) (-6280.092) [-6278.358] * [-6277.863] (-6281.063) (-6287.999) (-6286.075) -- 0:10:49
432000 -- (-6288.178) (-6283.969) [-6281.857] (-6280.948) * [-6288.318] (-6281.819) (-6282.143) (-6279.356) -- 0:10:48
433000 -- (-6286.207) (-6285.138) (-6286.673) [-6279.641] * (-6287.954) [-6280.870] (-6288.114) (-6278.136) -- 0:10:48
434000 -- [-6281.822] (-6280.196) (-6280.849) (-6284.551) * (-6295.543) (-6281.471) [-6285.660] (-6287.483) -- 0:10:46
435000 -- (-6277.876) (-6285.487) [-6276.769] (-6294.552) * (-6282.818) [-6282.495] (-6279.726) (-6283.183) -- 0:10:45
Average standard deviation of split frequencies: 0.005298
436000 -- [-6278.363] (-6277.657) (-6292.596) (-6288.123) * [-6283.006] (-6297.271) (-6285.962) (-6282.272) -- 0:10:44
437000 -- (-6285.191) [-6278.154] (-6283.111) (-6285.966) * [-6279.937] (-6292.497) (-6286.366) (-6284.893) -- 0:10:42
438000 -- [-6287.401] (-6290.476) (-6279.131) (-6284.731) * (-6283.228) [-6280.445] (-6280.228) (-6284.337) -- 0:10:41
439000 -- (-6291.617) [-6280.289] (-6278.501) (-6292.948) * (-6282.334) (-6283.265) [-6277.959] (-6282.225) -- 0:10:40
440000 -- (-6286.189) [-6279.950] (-6296.139) (-6287.004) * (-6279.300) [-6285.809] (-6281.113) (-6288.251) -- 0:10:40
Average standard deviation of split frequencies: 0.005456
441000 -- [-6279.912] (-6290.897) (-6283.298) (-6284.216) * (-6286.275) [-6279.876] (-6284.289) (-6287.031) -- 0:10:38
442000 -- (-6284.395) [-6282.551] (-6283.137) (-6287.135) * (-6284.458) (-6284.247) (-6287.526) [-6283.857] -- 0:10:37
443000 -- (-6291.816) (-6290.462) (-6274.721) [-6285.807] * [-6276.436] (-6281.235) (-6288.338) (-6286.346) -- 0:10:36
444000 -- (-6284.227) (-6290.214) [-6279.056] (-6284.663) * (-6291.344) [-6278.304] (-6287.690) (-6284.771) -- 0:10:34
445000 -- [-6277.242] (-6279.138) (-6280.719) (-6291.733) * (-6284.950) (-6287.339) (-6282.467) [-6282.722] -- 0:10:33
Average standard deviation of split frequencies: 0.005391
446000 -- (-6288.877) (-6287.556) (-6286.440) [-6285.674] * (-6282.784) [-6279.432] (-6285.456) (-6287.124) -- 0:10:32
447000 -- (-6284.260) (-6277.091) [-6287.865] (-6291.278) * (-6283.883) (-6288.294) (-6283.376) [-6290.500] -- 0:10:32
448000 -- [-6278.158] (-6278.460) (-6281.831) (-6292.979) * (-6280.175) [-6277.454] (-6280.732) (-6293.236) -- 0:10:30
449000 -- (-6281.161) [-6273.597] (-6283.300) (-6283.331) * [-6282.012] (-6280.928) (-6284.943) (-6286.906) -- 0:10:29
450000 -- (-6278.835) (-6281.529) (-6285.543) [-6289.669] * [-6277.973] (-6292.998) (-6279.888) (-6296.065) -- 0:10:28
Average standard deviation of split frequencies: 0.004916
451000 -- (-6287.849) (-6291.257) (-6282.161) [-6281.462] * (-6280.260) [-6287.801] (-6288.246) (-6289.620) -- 0:10:26
452000 -- (-6293.078) (-6278.900) (-6277.483) [-6283.005] * (-6281.483) (-6285.282) (-6293.266) [-6280.410] -- 0:10:25
453000 -- (-6281.674) [-6279.616] (-6289.207) (-6284.538) * (-6284.819) [-6280.005] (-6292.070) (-6296.734) -- 0:10:24
454000 -- [-6279.631] (-6279.406) (-6284.431) (-6284.478) * [-6284.127] (-6287.257) (-6286.166) (-6288.431) -- 0:10:24
455000 -- (-6288.310) (-6289.011) [-6286.763] (-6292.143) * [-6278.557] (-6284.879) (-6277.865) (-6280.885) -- 0:10:22
Average standard deviation of split frequencies: 0.005169
456000 -- (-6277.962) (-6283.258) [-6283.653] (-6271.940) * [-6285.388] (-6280.961) (-6285.550) (-6291.505) -- 0:10:21
457000 -- [-6284.432] (-6280.127) (-6284.063) (-6277.974) * [-6282.590] (-6292.899) (-6290.982) (-6282.908) -- 0:10:20
458000 -- (-6283.178) (-6277.935) [-6284.120] (-6281.160) * (-6279.430) (-6285.627) [-6285.520] (-6292.950) -- 0:10:18
459000 -- [-6277.285] (-6281.091) (-6279.052) (-6282.328) * [-6277.424] (-6292.099) (-6285.925) (-6283.384) -- 0:10:17
460000 -- (-6280.047) [-6288.848] (-6288.088) (-6287.905) * (-6287.371) (-6282.846) (-6287.724) [-6275.454] -- 0:10:16
Average standard deviation of split frequencies: 0.005526
461000 -- (-6293.880) (-6282.270) (-6286.021) [-6283.445] * (-6289.220) (-6285.935) (-6277.502) [-6282.000] -- 0:10:16
462000 -- (-6284.951) (-6278.923) [-6279.801] (-6283.598) * (-6285.844) (-6280.813) [-6276.908] (-6283.833) -- 0:10:14
463000 -- (-6287.384) [-6277.924] (-6281.666) (-6278.054) * (-6277.849) (-6280.134) (-6283.842) [-6286.792] -- 0:10:13
464000 -- (-6280.200) [-6277.425] (-6284.089) (-6290.939) * (-6296.308) (-6281.320) [-6277.845] (-6281.358) -- 0:10:12
465000 -- (-6281.378) (-6281.219) [-6273.557] (-6279.809) * (-6284.159) (-6284.495) (-6283.850) [-6282.989] -- 0:10:10
Average standard deviation of split frequencies: 0.004653
466000 -- [-6284.267] (-6292.850) (-6278.329) (-6281.864) * (-6300.736) [-6282.571] (-6278.666) (-6285.697) -- 0:10:09
467000 -- (-6279.145) (-6282.306) [-6285.824] (-6289.555) * (-6285.269) (-6278.900) (-6280.749) [-6279.517] -- 0:10:08
468000 -- [-6279.320] (-6284.768) (-6278.346) (-6286.654) * (-6280.204) [-6285.454] (-6282.854) (-6288.553) -- 0:10:08
469000 -- [-6282.783] (-6288.559) (-6284.809) (-6287.143) * (-6282.939) (-6279.078) [-6283.183] (-6284.357) -- 0:10:06
470000 -- (-6282.547) (-6289.222) [-6278.847] (-6284.517) * (-6285.479) (-6280.635) (-6295.258) [-6287.466] -- 0:10:05
Average standard deviation of split frequencies: 0.004407
471000 -- (-6281.046) (-6291.825) (-6290.975) [-6279.530] * (-6282.643) (-6289.772) [-6278.825] (-6281.419) -- 0:10:04
472000 -- (-6277.419) (-6286.987) [-6282.039] (-6280.772) * (-6304.059) (-6285.290) (-6283.051) [-6279.423] -- 0:10:02
473000 -- [-6279.256] (-6280.211) (-6283.915) (-6288.468) * (-6288.514) (-6290.878) (-6287.889) [-6281.714] -- 0:10:01
474000 -- (-6283.529) (-6285.732) (-6286.916) [-6274.473] * (-6286.195) (-6282.909) (-6278.682) [-6283.631] -- 0:10:00
475000 -- (-6281.463) (-6288.288) [-6278.623] (-6277.835) * (-6278.669) [-6280.405] (-6283.553) (-6288.924) -- 0:10:00
Average standard deviation of split frequencies: 0.004457
476000 -- (-6283.588) (-6295.531) (-6295.278) [-6279.513] * (-6280.757) (-6277.341) [-6277.063] (-6286.713) -- 0:09:58
477000 -- (-6299.917) (-6292.357) (-6284.787) [-6277.627] * (-6284.928) (-6282.847) [-6279.507] (-6283.409) -- 0:09:57
478000 -- [-6280.142] (-6291.064) (-6283.298) (-6285.190) * [-6281.209] (-6284.853) (-6285.640) (-6281.497) -- 0:09:56
479000 -- (-6282.623) [-6284.047] (-6281.034) (-6289.169) * [-6277.715] (-6288.615) (-6287.162) (-6293.779) -- 0:09:54
480000 -- [-6282.525] (-6280.170) (-6285.090) (-6282.583) * [-6275.609] (-6288.760) (-6280.810) (-6280.090) -- 0:09:53
Average standard deviation of split frequencies: 0.004021
481000 -- (-6286.767) (-6281.961) (-6294.803) [-6278.926] * [-6281.379] (-6283.940) (-6289.908) (-6293.392) -- 0:09:52
482000 -- (-6282.298) (-6279.417) [-6281.000] (-6281.231) * (-6284.425) (-6277.175) (-6290.970) [-6290.794] -- 0:09:51
483000 -- (-6279.128) (-6285.399) (-6282.320) [-6278.660] * (-6275.004) (-6282.478) (-6292.110) [-6281.475] -- 0:09:50
484000 -- (-6274.398) (-6281.152) (-6290.977) [-6284.259] * [-6290.019] (-6293.877) (-6283.609) (-6287.973) -- 0:09:49
485000 -- [-6277.730] (-6278.812) (-6289.303) (-6283.148) * (-6284.993) (-6285.047) [-6283.248] (-6289.381) -- 0:09:48
Average standard deviation of split frequencies: 0.003589
486000 -- (-6289.560) [-6280.215] (-6279.136) (-6286.958) * (-6279.905) (-6298.227) [-6275.683] (-6282.608) -- 0:09:46
487000 -- (-6276.222) (-6287.066) (-6289.245) [-6280.792] * (-6280.955) (-6294.480) [-6278.902] (-6280.350) -- 0:09:45
488000 -- (-6299.085) [-6284.292] (-6284.613) (-6282.724) * (-6290.122) (-6281.568) (-6281.584) [-6285.403] -- 0:09:44
489000 -- [-6284.831] (-6284.290) (-6281.264) (-6278.898) * (-6279.747) (-6277.164) [-6275.280] (-6283.708) -- 0:09:43
490000 -- [-6275.566] (-6281.231) (-6281.800) (-6291.009) * (-6289.124) (-6282.550) (-6285.053) [-6278.615] -- 0:09:42
Average standard deviation of split frequencies: 0.004131
491000 -- (-6280.075) (-6279.771) [-6278.302] (-6278.787) * [-6283.027] (-6290.205) (-6286.313) (-6282.040) -- 0:09:41
492000 -- (-6281.145) (-6292.857) [-6276.592] (-6284.681) * (-6302.281) [-6283.435] (-6278.119) (-6284.823) -- 0:09:40
493000 -- (-6274.655) (-6286.394) [-6285.236] (-6276.255) * (-6284.892) (-6290.740) [-6274.509] (-6293.096) -- 0:09:38
494000 -- [-6278.840] (-6286.671) (-6280.267) (-6277.635) * (-6278.688) [-6279.237] (-6280.980) (-6285.592) -- 0:09:37
495000 -- (-6282.003) (-6284.383) [-6278.708] (-6282.761) * [-6283.580] (-6287.270) (-6281.714) (-6290.227) -- 0:09:36
Average standard deviation of split frequencies: 0.004182
496000 -- (-6290.271) (-6283.701) [-6286.937] (-6280.055) * (-6285.493) [-6280.648] (-6289.422) (-6283.983) -- 0:09:35
497000 -- [-6276.483] (-6282.751) (-6285.176) (-6296.136) * [-6286.143] (-6289.848) (-6279.519) (-6294.370) -- 0:09:34
498000 -- (-6287.271) [-6289.118] (-6283.490) (-6281.865) * [-6283.098] (-6277.050) (-6273.848) (-6283.853) -- 0:09:33
499000 -- (-6286.114) (-6284.179) [-6279.622] (-6280.737) * (-6283.937) [-6276.424] (-6279.194) (-6295.338) -- 0:09:32
500000 -- (-6279.175) [-6280.583] (-6273.943) (-6290.740) * (-6288.809) (-6281.752) (-6293.607) [-6285.787] -- 0:09:31
Average standard deviation of split frequencies: 0.004519
501000 -- (-6287.527) (-6283.832) (-6293.333) [-6277.715] * (-6290.878) (-6290.552) (-6288.297) [-6277.323] -- 0:09:29
502000 -- (-6287.634) (-6283.781) [-6286.089] (-6278.301) * (-6291.849) [-6284.798] (-6282.076) (-6283.264) -- 0:09:28
503000 -- (-6290.087) (-6277.565) (-6282.290) [-6279.987] * (-6280.716) (-6283.372) [-6274.451] (-6283.575) -- 0:09:27
504000 -- [-6280.134] (-6285.239) (-6287.314) (-6289.443) * [-6280.407] (-6287.475) (-6278.481) (-6292.872) -- 0:09:26
505000 -- (-6300.135) (-6290.448) [-6277.784] (-6281.191) * (-6282.780) (-6287.825) (-6295.988) [-6279.495] -- 0:09:25
Average standard deviation of split frequencies: 0.003633
506000 -- (-6290.055) (-6296.897) [-6278.580] (-6280.849) * (-6293.909) (-6278.672) (-6290.728) [-6278.189] -- 0:09:24
507000 -- (-6288.261) (-6287.167) [-6282.093] (-6288.692) * [-6280.960] (-6279.191) (-6284.397) (-6279.643) -- 0:09:23
508000 -- (-6285.454) (-6293.999) [-6282.435] (-6285.309) * (-6276.085) (-6277.510) (-6290.942) [-6282.605] -- 0:09:21
509000 -- (-6292.789) (-6281.686) (-6281.451) [-6281.421] * (-6285.736) (-6289.440) [-6289.397] (-6278.066) -- 0:09:20
510000 -- (-6279.520) [-6282.250] (-6275.812) (-6280.373) * (-6283.947) (-6283.288) (-6284.115) [-6284.334] -- 0:09:20
Average standard deviation of split frequencies: 0.003877
511000 -- (-6283.389) (-6284.107) (-6284.209) [-6275.562] * [-6280.770] (-6285.824) (-6291.940) (-6292.461) -- 0:09:18
512000 -- (-6279.278) [-6281.119] (-6297.801) (-6281.062) * [-6280.294] (-6285.488) (-6285.900) (-6281.003) -- 0:09:17
513000 -- (-6282.475) (-6281.678) (-6280.196) [-6284.806] * (-6285.579) (-6288.940) [-6286.685] (-6279.541) -- 0:09:16
514000 -- [-6287.538] (-6281.985) (-6276.200) (-6278.277) * (-6285.718) (-6286.413) (-6285.574) [-6280.451] -- 0:09:15
515000 -- (-6281.546) (-6282.318) (-6284.136) [-6273.582] * [-6286.055] (-6282.278) (-6283.065) (-6279.738) -- 0:09:13
Average standard deviation of split frequencies: 0.004111
516000 -- (-6289.426) (-6281.890) [-6281.127] (-6278.263) * [-6286.311] (-6277.762) (-6280.407) (-6289.239) -- 0:09:12
517000 -- (-6284.060) (-6284.648) (-6282.089) [-6285.838] * (-6281.560) (-6281.680) [-6284.278] (-6286.213) -- 0:09:12
518000 -- (-6281.900) (-6286.461) (-6281.345) [-6280.378] * (-6281.802) (-6286.889) [-6275.087] (-6292.301) -- 0:09:10
519000 -- [-6285.952] (-6288.274) (-6287.406) (-6281.087) * (-6281.490) [-6283.598] (-6276.849) (-6285.481) -- 0:09:09
520000 -- (-6281.475) (-6287.955) (-6279.248) [-6277.710] * [-6280.949] (-6294.498) (-6278.684) (-6284.783) -- 0:09:08
Average standard deviation of split frequencies: 0.003712
521000 -- (-6284.144) (-6286.096) [-6282.161] (-6281.165) * [-6285.135] (-6285.780) (-6282.656) (-6280.861) -- 0:09:07
522000 -- [-6288.868] (-6284.040) (-6287.274) (-6279.684) * [-6281.735] (-6288.851) (-6278.443) (-6295.613) -- 0:09:05
523000 -- (-6282.443) [-6283.162] (-6285.892) (-6289.240) * [-6283.733] (-6286.547) (-6288.201) (-6293.258) -- 0:09:04
524000 -- (-6293.971) (-6291.093) (-6283.649) [-6281.221] * (-6283.404) [-6276.203] (-6275.935) (-6282.338) -- 0:09:04
525000 -- (-6283.535) (-6277.457) [-6290.378] (-6277.417) * [-6279.811] (-6283.469) (-6285.075) (-6286.413) -- 0:09:02
Average standard deviation of split frequencies: 0.004929
526000 -- [-6279.542] (-6276.369) (-6283.818) (-6288.145) * (-6281.340) (-6282.893) [-6280.295] (-6274.870) -- 0:09:01
527000 -- [-6280.281] (-6281.944) (-6286.408) (-6281.050) * [-6280.206] (-6283.701) (-6288.348) (-6286.577) -- 0:09:00
528000 -- (-6291.050) (-6290.539) [-6277.319] (-6283.173) * [-6276.648] (-6290.635) (-6293.566) (-6278.444) -- 0:08:59
529000 -- [-6281.076] (-6286.346) (-6283.805) (-6276.977) * [-6281.967] (-6278.909) (-6291.464) (-6283.110) -- 0:08:57
530000 -- [-6281.503] (-6280.581) (-6285.871) (-6287.277) * (-6275.651) [-6283.249] (-6289.591) (-6284.831) -- 0:08:57
Average standard deviation of split frequencies: 0.005063
531000 -- (-6286.672) [-6292.521] (-6285.626) (-6285.294) * [-6278.978] (-6284.811) (-6290.323) (-6282.593) -- 0:08:56
532000 -- (-6288.584) (-6281.073) [-6283.757] (-6282.105) * [-6285.762] (-6283.192) (-6289.194) (-6286.828) -- 0:08:54
533000 -- (-6292.022) (-6278.254) (-6286.782) [-6275.452] * (-6275.922) (-6278.892) [-6284.073] (-6281.073) -- 0:08:53
534000 -- (-6298.267) (-6279.002) (-6277.829) [-6283.528] * (-6280.458) (-6287.248) [-6276.046] (-6280.846) -- 0:08:52
535000 -- (-6282.124) (-6289.242) (-6283.385) [-6281.514] * (-6283.863) (-6290.870) (-6283.146) [-6281.056] -- 0:08:51
Average standard deviation of split frequencies: 0.004925
536000 -- [-6279.915] (-6284.511) (-6292.553) (-6283.191) * (-6285.373) [-6287.564] (-6272.266) (-6288.427) -- 0:08:49
537000 -- (-6286.349) (-6284.221) (-6283.400) [-6282.007] * (-6282.553) (-6280.673) [-6284.746] (-6286.434) -- 0:08:48
538000 -- (-6280.563) (-6299.963) [-6285.841] (-6289.170) * (-6287.314) [-6278.389] (-6287.690) (-6281.880) -- 0:08:48
539000 -- (-6287.478) [-6280.253] (-6294.839) (-6276.859) * [-6276.682] (-6283.368) (-6279.371) (-6286.615) -- 0:08:46
540000 -- (-6280.196) [-6278.646] (-6290.992) (-6282.564) * [-6285.296] (-6282.752) (-6299.764) (-6282.558) -- 0:08:45
Average standard deviation of split frequencies: 0.004621
541000 -- (-6283.857) (-6289.265) (-6292.567) [-6281.725] * (-6286.676) [-6282.927] (-6279.704) (-6286.918) -- 0:08:44
542000 -- [-6281.221] (-6285.241) (-6287.552) (-6280.750) * [-6286.301] (-6285.494) (-6286.489) (-6282.260) -- 0:08:43
543000 -- (-6278.828) (-6282.680) [-6281.803] (-6280.649) * (-6284.376) (-6273.926) (-6281.667) [-6281.538] -- 0:08:41
544000 -- (-6286.845) [-6277.895] (-6296.632) (-6285.744) * [-6278.707] (-6278.692) (-6289.415) (-6289.655) -- 0:08:40
545000 -- (-6289.665) (-6284.841) [-6282.904] (-6281.829) * [-6275.559] (-6282.610) (-6287.225) (-6288.579) -- 0:08:40
Average standard deviation of split frequencies: 0.005094
546000 -- (-6283.632) (-6283.506) (-6284.018) [-6287.562] * (-6275.272) [-6273.737] (-6279.607) (-6284.538) -- 0:08:38
547000 -- [-6283.716] (-6287.425) (-6278.619) (-6282.339) * (-6281.351) [-6280.817] (-6282.227) (-6277.955) -- 0:08:37
548000 -- (-6286.435) (-6292.933) (-6280.514) [-6287.507] * (-6276.741) (-6282.867) (-6290.411) [-6279.038] -- 0:08:36
549000 -- (-6284.695) [-6274.150] (-6285.075) (-6282.104) * (-6284.645) (-6278.410) [-6281.015] (-6275.618) -- 0:08:35
550000 -- (-6284.328) (-6281.339) (-6282.553) [-6282.409] * [-6283.447] (-6283.064) (-6277.167) (-6281.262) -- 0:08:33
Average standard deviation of split frequencies: 0.005479
551000 -- (-6287.798) [-6287.878] (-6282.153) (-6287.313) * (-6286.354) (-6283.125) (-6278.730) [-6287.642] -- 0:08:32
552000 -- (-6285.767) (-6293.182) [-6278.857] (-6283.927) * (-6284.806) [-6287.465] (-6291.601) (-6281.517) -- 0:08:31
553000 -- (-6285.208) (-6278.606) (-6283.227) [-6279.067] * (-6289.069) (-6286.060) [-6284.679] (-6292.005) -- 0:08:30
554000 -- (-6277.909) (-6296.900) (-6287.652) [-6282.257] * (-6276.987) [-6281.565] (-6279.135) (-6284.015) -- 0:08:29
555000 -- (-6292.854) (-6279.714) (-6284.513) [-6279.413] * (-6275.196) [-6276.703] (-6287.643) (-6289.144) -- 0:08:28
Average standard deviation of split frequencies: 0.005681
556000 -- (-6284.549) (-6280.931) (-6290.181) [-6278.168] * [-6278.422] (-6283.876) (-6284.117) (-6284.563) -- 0:08:27
557000 -- (-6281.872) (-6282.127) (-6295.960) [-6285.579] * (-6281.892) [-6272.234] (-6286.498) (-6290.927) -- 0:08:25
558000 -- (-6282.631) (-6281.699) (-6288.481) [-6280.483] * (-6281.965) [-6279.641] (-6284.051) (-6289.229) -- 0:08:24
559000 -- (-6291.172) (-6289.485) (-6283.765) [-6279.288] * [-6278.206] (-6287.299) (-6284.389) (-6291.233) -- 0:08:23
560000 -- (-6279.854) (-6282.629) (-6274.271) [-6283.238] * (-6286.066) (-6280.288) [-6276.746] (-6290.952) -- 0:08:22
Average standard deviation of split frequencies: 0.004877
561000 -- (-6298.291) (-6282.527) [-6278.474] (-6283.192) * (-6281.609) (-6278.894) [-6279.969] (-6280.803) -- 0:08:21
562000 -- (-6283.427) [-6280.496] (-6285.499) (-6281.327) * (-6280.868) [-6279.037] (-6281.747) (-6283.157) -- 0:08:20
563000 -- (-6289.180) [-6288.640] (-6288.895) (-6289.041) * (-6294.866) (-6280.077) [-6285.153] (-6285.414) -- 0:08:19
564000 -- (-6281.148) [-6284.604] (-6285.337) (-6285.105) * (-6295.932) (-6283.696) [-6282.951] (-6286.274) -- 0:08:17
565000 -- (-6282.326) (-6290.103) [-6274.928] (-6285.989) * (-6294.682) [-6278.782] (-6284.053) (-6281.390) -- 0:08:16
Average standard deviation of split frequencies: 0.004664
566000 -- (-6277.640) (-6283.683) [-6277.371] (-6281.886) * (-6285.726) [-6283.708] (-6287.345) (-6281.155) -- 0:08:15
567000 -- [-6278.599] (-6289.037) (-6293.306) (-6282.078) * (-6282.731) [-6280.986] (-6276.409) (-6276.257) -- 0:08:14
568000 -- (-6279.199) [-6286.066] (-6292.886) (-6290.529) * (-6295.008) (-6289.806) [-6284.573] (-6283.693) -- 0:08:13
569000 -- (-6284.020) (-6290.959) (-6293.493) [-6279.604] * (-6289.485) (-6288.694) [-6292.607] (-6286.381) -- 0:08:12
570000 -- [-6277.666] (-6295.921) (-6285.664) (-6287.223) * (-6276.097) (-6286.835) [-6285.491] (-6282.524) -- 0:08:11
Average standard deviation of split frequencies: 0.005039
571000 -- (-6288.050) [-6279.729] (-6280.227) (-6286.362) * [-6287.520] (-6289.730) (-6281.978) (-6286.579) -- 0:08:09
572000 -- (-6281.248) (-6278.437) [-6280.121] (-6283.882) * (-6288.083) (-6287.856) [-6280.031] (-6285.215) -- 0:08:08
573000 -- (-6286.124) [-6281.931] (-6296.682) (-6281.684) * (-6279.055) (-6294.441) (-6280.509) [-6284.002] -- 0:08:07
574000 -- (-6277.667) (-6287.106) (-6278.736) [-6279.579] * (-6277.932) (-6288.929) (-6277.751) [-6282.526] -- 0:08:06
575000 -- (-6285.551) (-6293.429) [-6274.145] (-6288.161) * (-6286.883) [-6285.504] (-6286.163) (-6290.643) -- 0:08:05
Average standard deviation of split frequencies: 0.005320
576000 -- (-6282.322) [-6282.003] (-6287.826) (-6287.360) * [-6280.560] (-6283.041) (-6289.205) (-6287.073) -- 0:08:04
577000 -- (-6283.758) [-6282.766] (-6287.575) (-6293.604) * [-6279.087] (-6282.139) (-6278.536) (-6292.242) -- 0:08:03
578000 -- [-6282.465] (-6300.147) (-6276.408) (-6297.143) * [-6277.060] (-6285.476) (-6280.984) (-6299.847) -- 0:08:01
579000 -- [-6282.021] (-6286.615) (-6286.715) (-6293.069) * (-6284.299) (-6296.245) [-6288.104] (-6281.837) -- 0:08:00
580000 -- (-6287.120) [-6294.607] (-6285.214) (-6286.432) * (-6275.629) (-6292.713) [-6282.076] (-6289.366) -- 0:08:00
Average standard deviation of split frequencies: 0.004709
581000 -- (-6285.943) (-6292.083) [-6281.437] (-6283.041) * (-6283.149) (-6292.682) (-6277.923) [-6279.969] -- 0:07:58
582000 -- (-6277.691) (-6286.980) [-6286.139] (-6282.571) * (-6288.380) (-6278.186) [-6281.616] (-6291.236) -- 0:07:57
583000 -- (-6282.849) (-6294.995) (-6288.406) [-6277.678] * (-6289.886) [-6283.336] (-6283.413) (-6291.866) -- 0:07:56
584000 -- (-6278.318) (-6285.376) (-6286.354) [-6281.529] * (-6300.017) [-6287.962] (-6279.079) (-6286.435) -- 0:07:55
585000 -- (-6278.780) (-6283.839) [-6280.892] (-6284.437) * [-6282.399] (-6284.147) (-6279.459) (-6288.380) -- 0:07:53
Average standard deviation of split frequencies: 0.005148
586000 -- (-6285.093) (-6285.384) [-6283.023] (-6282.860) * (-6283.210) (-6282.768) (-6292.054) [-6279.286] -- 0:07:52
587000 -- (-6278.207) [-6286.542] (-6283.479) (-6284.917) * [-6282.457] (-6284.773) (-6283.275) (-6293.123) -- 0:07:52
588000 -- [-6281.608] (-6279.106) (-6282.868) (-6282.199) * (-6284.316) (-6285.645) [-6282.581] (-6293.279) -- 0:07:50
589000 -- [-6287.038] (-6284.177) (-6278.977) (-6291.164) * (-6289.356) [-6282.551] (-6290.409) (-6280.314) -- 0:07:49
590000 -- (-6284.149) [-6275.686] (-6295.717) (-6286.675) * (-6279.502) (-6292.698) [-6285.697] (-6293.326) -- 0:07:48
Average standard deviation of split frequencies: 0.004709
591000 -- (-6286.527) (-6282.397) (-6285.397) [-6277.105] * [-6281.400] (-6290.207) (-6285.321) (-6290.368) -- 0:07:47
592000 -- [-6277.639] (-6287.330) (-6282.370) (-6280.466) * [-6287.599] (-6282.851) (-6290.042) (-6281.703) -- 0:07:45
593000 -- (-6281.673) (-6297.724) (-6280.710) [-6280.949] * [-6289.339] (-6284.152) (-6282.175) (-6288.475) -- 0:07:44
594000 -- (-6284.076) (-6283.071) (-6293.813) [-6282.293] * [-6285.158] (-6284.620) (-6279.455) (-6296.515) -- 0:07:44
595000 -- (-6289.141) (-6288.378) (-6287.309) [-6281.725] * (-6285.829) (-6285.626) (-6283.185) [-6284.398] -- 0:07:42
Average standard deviation of split frequencies: 0.004825
596000 -- (-6288.023) (-6292.447) [-6288.627] (-6278.034) * [-6282.016] (-6283.288) (-6285.603) (-6280.232) -- 0:07:41
597000 -- (-6281.110) [-6283.079] (-6281.683) (-6287.798) * [-6283.615] (-6278.508) (-6280.253) (-6283.979) -- 0:07:40
598000 -- (-6285.826) [-6277.728] (-6288.560) (-6288.322) * (-6281.993) (-6285.394) [-6278.413] (-6290.521) -- 0:07:39
599000 -- (-6282.676) (-6285.192) [-6281.383] (-6283.254) * [-6274.152] (-6295.172) (-6290.758) (-6288.217) -- 0:07:37
600000 -- (-6285.354) (-6277.944) [-6284.995] (-6281.897) * (-6288.851) [-6278.887] (-6280.715) (-6283.445) -- 0:07:36
Average standard deviation of split frequencies: 0.005101
601000 -- (-6288.156) (-6282.695) (-6285.656) [-6275.796] * (-6278.853) [-6275.750] (-6283.143) (-6284.635) -- 0:07:36
602000 -- (-6285.188) [-6280.136] (-6283.806) (-6288.040) * (-6284.316) (-6282.049) (-6279.057) [-6288.007] -- 0:07:34
603000 -- (-6298.230) (-6282.463) [-6276.962] (-6289.981) * (-6284.068) (-6285.041) (-6280.372) [-6280.897] -- 0:07:33
604000 -- [-6285.079] (-6283.764) (-6279.274) (-6285.579) * (-6282.055) [-6272.958] (-6283.811) (-6276.567) -- 0:07:32
605000 -- (-6284.271) (-6284.933) [-6283.812] (-6291.758) * (-6288.548) [-6276.278] (-6280.719) (-6290.439) -- 0:07:31
Average standard deviation of split frequencies: 0.005601
606000 -- (-6283.567) (-6281.811) [-6281.309] (-6280.605) * [-6278.058] (-6288.430) (-6279.183) (-6293.625) -- 0:07:29
607000 -- (-6290.488) [-6283.602] (-6278.721) (-6275.977) * (-6285.048) (-6292.048) [-6283.559] (-6278.469) -- 0:07:28
608000 -- (-6280.743) [-6278.244] (-6288.356) (-6275.304) * (-6281.821) (-6282.111) [-6275.110] (-6285.590) -- 0:07:28
609000 -- (-6288.646) [-6274.139] (-6286.782) (-6285.384) * (-6284.393) (-6286.544) [-6277.695] (-6285.087) -- 0:07:26
610000 -- (-6292.520) [-6285.032] (-6282.402) (-6299.182) * (-6283.547) [-6279.029] (-6280.520) (-6294.906) -- 0:07:25
Average standard deviation of split frequencies: 0.005790
611000 -- (-6278.221) [-6278.738] (-6280.711) (-6291.957) * (-6286.043) (-6285.523) [-6290.762] (-6282.333) -- 0:07:24
612000 -- (-6280.776) [-6281.022] (-6285.385) (-6290.511) * (-6287.953) [-6278.624] (-6287.753) (-6294.764) -- 0:07:23
613000 -- (-6279.797) (-6277.282) [-6277.646] (-6284.669) * (-6281.962) (-6275.851) (-6284.862) [-6277.012] -- 0:07:21
614000 -- (-6289.677) [-6277.915] (-6286.038) (-6285.095) * (-6284.807) [-6283.717] (-6283.501) (-6282.973) -- 0:07:20
615000 -- [-6277.306] (-6285.720) (-6290.956) (-6283.901) * (-6283.826) [-6272.763] (-6296.549) (-6282.758) -- 0:07:20
Average standard deviation of split frequencies: 0.005204
616000 -- (-6284.287) (-6280.370) (-6281.162) [-6285.024] * (-6290.408) [-6282.060] (-6292.109) (-6284.836) -- 0:07:18
617000 -- (-6300.486) [-6285.135] (-6278.698) (-6289.851) * (-6283.028) (-6279.313) (-6293.978) [-6284.858] -- 0:07:17
618000 -- [-6279.031] (-6280.729) (-6285.670) (-6281.838) * (-6284.123) [-6286.755] (-6280.400) (-6286.122) -- 0:07:16
619000 -- [-6273.605] (-6290.565) (-6279.084) (-6291.021) * (-6286.306) (-6280.354) (-6285.230) [-6280.002] -- 0:07:15
620000 -- (-6285.846) [-6277.460] (-6291.546) (-6284.213) * (-6283.546) (-6274.668) [-6274.911] (-6297.062) -- 0:07:13
Average standard deviation of split frequencies: 0.004937
621000 -- (-6278.492) (-6284.494) [-6288.512] (-6293.489) * (-6285.335) (-6291.499) (-6283.265) [-6286.807] -- 0:07:12
622000 -- [-6285.445] (-6286.131) (-6273.502) (-6288.236) * (-6282.836) (-6281.279) [-6282.217] (-6287.870) -- 0:07:12
623000 -- (-6285.781) (-6284.545) (-6285.159) [-6285.169] * [-6278.128] (-6283.466) (-6285.930) (-6292.248) -- 0:07:10
624000 -- (-6274.524) [-6278.218] (-6282.299) (-6284.061) * (-6286.205) [-6279.144] (-6280.319) (-6280.293) -- 0:07:09
625000 -- (-6281.735) (-6282.290) (-6287.423) [-6287.173] * (-6294.725) [-6280.426] (-6281.005) (-6278.520) -- 0:07:08
Average standard deviation of split frequencies: 0.005422
626000 -- (-6288.647) (-6284.789) (-6277.768) [-6281.010] * [-6279.743] (-6278.146) (-6282.112) (-6279.107) -- 0:07:07
627000 -- (-6283.753) (-6293.419) [-6284.827] (-6289.983) * (-6294.027) [-6283.657] (-6285.446) (-6280.538) -- 0:07:05
628000 -- (-6284.131) (-6284.877) (-6290.789) [-6286.072] * (-6284.529) [-6283.392] (-6291.356) (-6293.588) -- 0:07:04
629000 -- (-6283.816) [-6277.014] (-6290.121) (-6290.583) * [-6278.455] (-6279.700) (-6280.476) (-6274.175) -- 0:07:03
630000 -- [-6280.419] (-6280.884) (-6283.123) (-6286.413) * (-6279.130) (-6284.342) (-6282.052) [-6285.585] -- 0:07:02
Average standard deviation of split frequencies: 0.005307
631000 -- (-6288.844) (-6279.848) [-6281.768] (-6291.217) * [-6277.869] (-6288.452) (-6276.921) (-6284.724) -- 0:07:01
632000 -- (-6285.897) (-6278.454) [-6281.186] (-6291.454) * (-6280.189) (-6282.093) [-6279.884] (-6292.716) -- 0:07:00
633000 -- [-6288.194] (-6279.209) (-6287.407) (-6289.517) * (-6282.146) [-6282.960] (-6283.633) (-6284.264) -- 0:06:59
634000 -- (-6289.204) [-6283.131] (-6281.678) (-6284.830) * [-6279.366] (-6281.850) (-6284.742) (-6281.806) -- 0:06:57
635000 -- (-6289.489) (-6279.983) (-6283.088) [-6284.669] * [-6283.039] (-6279.942) (-6278.062) (-6289.120) -- 0:06:57
Average standard deviation of split frequencies: 0.006004
636000 -- (-6283.547) (-6295.963) (-6279.416) [-6281.762] * (-6283.531) [-6282.290] (-6289.898) (-6287.444) -- 0:06:56
637000 -- [-6283.402] (-6291.584) (-6280.447) (-6294.272) * [-6275.078] (-6284.783) (-6280.479) (-6286.894) -- 0:06:54
638000 -- (-6281.581) (-6286.778) [-6282.331] (-6290.359) * (-6286.622) (-6281.702) [-6279.439] (-6287.035) -- 0:06:53
639000 -- [-6282.789] (-6282.108) (-6280.298) (-6285.141) * (-6281.781) (-6290.542) [-6278.601] (-6282.931) -- 0:06:52
640000 -- (-6287.554) (-6285.769) [-6276.780] (-6289.909) * (-6291.689) (-6286.633) (-6276.093) [-6280.887] -- 0:06:51
Average standard deviation of split frequencies: 0.006549
641000 -- [-6282.166] (-6289.332) (-6279.953) (-6292.738) * (-6290.037) [-6281.126] (-6290.007) (-6282.616) -- 0:06:49
642000 -- [-6285.123] (-6291.945) (-6287.282) (-6281.010) * (-6286.182) (-6275.485) [-6286.939] (-6284.589) -- 0:06:49
643000 -- (-6277.918) (-6284.342) [-6289.743] (-6284.197) * [-6284.586] (-6281.626) (-6280.672) (-6292.619) -- 0:06:48
644000 -- (-6284.177) (-6277.134) [-6285.103] (-6288.107) * (-6280.318) [-6293.463] (-6280.668) (-6286.898) -- 0:06:46
645000 -- (-6294.597) [-6277.590] (-6293.700) (-6281.805) * (-6278.112) [-6287.362] (-6277.901) (-6286.846) -- 0:06:45
Average standard deviation of split frequencies: 0.006422
646000 -- (-6280.853) (-6287.281) (-6284.964) [-6280.995] * (-6286.973) (-6287.133) (-6282.567) [-6290.041] -- 0:06:44
647000 -- (-6282.505) (-6289.594) [-6280.827] (-6286.884) * (-6283.634) [-6280.215] (-6288.426) (-6274.796) -- 0:06:43
648000 -- (-6282.272) [-6283.507] (-6291.942) (-6279.007) * (-6287.938) (-6276.074) [-6273.871] (-6280.125) -- 0:06:41
649000 -- [-6279.777] (-6282.719) (-6289.242) (-6285.824) * (-6289.206) (-6287.065) (-6279.878) [-6282.467] -- 0:06:41
650000 -- [-6283.007] (-6294.250) (-6292.354) (-6291.422) * (-6284.223) (-6284.984) (-6287.103) [-6280.781] -- 0:06:40
Average standard deviation of split frequencies: 0.005868
651000 -- (-6284.869) (-6284.816) (-6288.519) [-6279.473] * (-6281.451) (-6282.562) (-6285.922) [-6277.552] -- 0:06:38
652000 -- (-6296.642) (-6283.684) (-6287.948) [-6279.718] * (-6281.931) (-6294.058) [-6284.751] (-6276.809) -- 0:06:37
653000 -- (-6300.309) (-6277.931) (-6298.030) [-6284.285] * (-6283.727) [-6276.605] (-6286.593) (-6279.937) -- 0:06:36
654000 -- (-6287.104) [-6284.991] (-6293.331) (-6282.148) * (-6278.281) (-6293.710) (-6278.871) [-6277.685] -- 0:06:35
655000 -- (-6294.327) (-6290.666) [-6279.597] (-6280.292) * (-6297.646) [-6271.173] (-6278.118) (-6286.295) -- 0:06:33
Average standard deviation of split frequencies: 0.006180
656000 -- (-6288.746) [-6278.816] (-6283.760) (-6282.704) * (-6291.339) [-6281.308] (-6284.486) (-6279.939) -- 0:06:33
657000 -- (-6289.026) (-6291.288) (-6285.364) [-6279.696] * (-6283.998) (-6292.296) (-6288.509) [-6288.252] -- 0:06:32
658000 -- (-6299.018) (-6279.810) [-6280.422] (-6281.846) * (-6280.660) [-6276.438] (-6290.990) (-6281.697) -- 0:06:30
659000 -- (-6283.347) (-6278.095) [-6287.259] (-6279.927) * (-6288.544) (-6284.561) [-6279.255] (-6285.471) -- 0:06:29
660000 -- [-6280.152] (-6283.059) (-6289.403) (-6287.447) * (-6294.112) (-6281.173) (-6285.300) [-6274.996] -- 0:06:28
Average standard deviation of split frequencies: 0.006850
661000 -- (-6284.381) [-6277.271] (-6291.024) (-6283.309) * (-6286.054) (-6289.295) (-6289.741) [-6282.518] -- 0:06:27
662000 -- (-6286.652) (-6282.598) (-6289.067) [-6283.801] * [-6279.916] (-6288.157) (-6290.879) (-6281.249) -- 0:06:25
663000 -- (-6288.235) [-6271.918] (-6285.310) (-6284.470) * [-6278.190] (-6280.483) (-6293.584) (-6286.270) -- 0:06:25
664000 -- (-6276.824) [-6278.736] (-6285.552) (-6279.055) * (-6282.333) (-6283.677) (-6284.391) [-6284.997] -- 0:06:24
665000 -- (-6286.971) (-6296.402) (-6291.017) [-6278.602] * (-6282.628) [-6284.109] (-6283.283) (-6287.932) -- 0:06:22
Average standard deviation of split frequencies: 0.006583
666000 -- [-6280.209] (-6282.689) (-6286.890) (-6282.038) * (-6277.922) (-6280.003) [-6287.385] (-6284.610) -- 0:06:21
667000 -- (-6284.280) (-6281.103) (-6286.694) [-6279.887] * (-6282.592) (-6277.646) (-6289.974) [-6278.674] -- 0:06:20
668000 -- [-6273.487] (-6279.947) (-6292.088) (-6285.832) * (-6274.978) (-6277.931) (-6287.363) [-6277.716] -- 0:06:19
669000 -- [-6285.482] (-6277.569) (-6280.088) (-6285.787) * (-6276.627) [-6281.006] (-6283.665) (-6284.736) -- 0:06:18
670000 -- [-6285.363] (-6290.015) (-6284.684) (-6277.220) * (-6280.640) [-6274.402] (-6286.245) (-6285.670) -- 0:06:17
Average standard deviation of split frequencies: 0.006677
671000 -- (-6294.090) (-6282.394) [-6278.934] (-6283.732) * (-6285.026) [-6281.118] (-6278.904) (-6284.888) -- 0:06:16
672000 -- (-6284.847) (-6287.635) [-6280.316] (-6283.549) * (-6288.918) [-6283.631] (-6288.254) (-6300.049) -- 0:06:14
673000 -- (-6286.652) (-6294.083) [-6288.992] (-6287.239) * (-6288.664) (-6295.212) [-6282.781] (-6279.691) -- 0:06:13
674000 -- [-6273.948] (-6286.548) (-6284.672) (-6287.147) * (-6292.476) [-6287.966] (-6278.184) (-6282.941) -- 0:06:12
675000 -- (-6283.839) (-6283.338) (-6286.565) [-6286.282] * (-6292.983) [-6292.486] (-6282.374) (-6282.983) -- 0:06:11
Average standard deviation of split frequencies: 0.007252
676000 -- [-6279.607] (-6286.993) (-6287.981) (-6283.898) * (-6283.363) (-6280.626) [-6283.369] (-6286.543) -- 0:06:10
677000 -- (-6279.890) [-6280.187] (-6278.385) (-6281.727) * (-6298.432) [-6284.533] (-6287.169) (-6276.678) -- 0:06:09
678000 -- (-6285.712) [-6283.200] (-6286.315) (-6284.741) * (-6280.585) (-6282.479) [-6297.366] (-6286.179) -- 0:06:08
679000 -- (-6284.643) [-6280.699] (-6286.717) (-6287.966) * (-6293.352) [-6284.630] (-6275.560) (-6282.403) -- 0:06:06
680000 -- (-6285.326) (-6282.819) [-6284.752] (-6280.173) * [-6283.573] (-6282.892) (-6287.279) (-6285.255) -- 0:06:05
Average standard deviation of split frequencies: 0.007341
681000 -- (-6294.103) (-6284.708) (-6286.956) [-6274.811] * (-6286.809) (-6292.727) (-6282.651) [-6282.044] -- 0:06:04
682000 -- (-6282.074) [-6284.187] (-6295.036) (-6289.462) * (-6287.583) (-6297.662) (-6280.801) [-6276.482] -- 0:06:03
683000 -- (-6291.412) (-6288.015) (-6294.535) [-6288.227] * (-6281.108) (-6279.255) (-6281.480) [-6287.112] -- 0:06:02
684000 -- (-6282.982) [-6272.605] (-6289.061) (-6285.640) * (-6284.002) (-6282.814) (-6281.479) [-6280.544] -- 0:06:01
685000 -- (-6291.211) (-6281.873) (-6303.578) [-6280.891] * (-6287.734) (-6272.884) (-6280.302) [-6283.666] -- 0:06:00
Average standard deviation of split frequencies: 0.008040
686000 -- (-6291.481) [-6284.315] (-6288.544) (-6283.971) * (-6292.126) (-6282.330) (-6280.611) [-6283.465] -- 0:05:58
687000 -- (-6289.681) (-6276.006) (-6282.816) [-6282.426] * (-6284.854) (-6294.689) [-6276.746] (-6283.483) -- 0:05:57
688000 -- [-6286.653] (-6281.518) (-6281.595) (-6286.772) * (-6286.212) [-6276.621] (-6301.859) (-6287.653) -- 0:05:56
689000 -- (-6285.098) (-6281.993) (-6290.130) [-6282.405] * (-6287.952) [-6283.399] (-6281.927) (-6285.247) -- 0:05:55
690000 -- (-6286.353) [-6282.707] (-6293.221) (-6279.139) * (-6285.662) (-6282.315) [-6278.397] (-6289.866) -- 0:05:54
Average standard deviation of split frequencies: 0.007986
691000 -- (-6288.226) [-6290.320] (-6286.114) (-6283.980) * (-6287.932) (-6283.652) [-6283.066] (-6280.009) -- 0:05:53
692000 -- (-6287.115) [-6280.925] (-6289.523) (-6282.914) * (-6295.605) [-6275.052] (-6280.286) (-6279.365) -- 0:05:52
693000 -- (-6287.628) (-6288.704) [-6282.542] (-6283.720) * [-6278.568] (-6273.086) (-6290.866) (-6282.004) -- 0:05:50
694000 -- (-6284.838) (-6286.180) [-6276.133] (-6280.486) * (-6287.221) (-6279.777) (-6284.212) [-6280.492] -- 0:05:49
695000 -- (-6287.259) (-6285.199) (-6279.118) [-6287.355] * (-6281.050) (-6277.256) [-6289.400] (-6282.805) -- 0:05:48
Average standard deviation of split frequencies: 0.007992
696000 -- (-6284.558) (-6283.352) (-6281.011) [-6281.302] * (-6284.407) (-6290.180) (-6286.795) [-6280.391] -- 0:05:47
697000 -- (-6277.862) [-6283.716] (-6283.479) (-6286.425) * (-6286.622) (-6311.331) (-6294.080) [-6286.301] -- 0:05:46
698000 -- (-6287.969) [-6278.066] (-6281.072) (-6283.898) * [-6281.570] (-6285.161) (-6293.723) (-6285.222) -- 0:05:45
699000 -- [-6280.530] (-6290.099) (-6290.265) (-6288.407) * (-6279.180) (-6278.819) (-6295.909) [-6279.008] -- 0:05:44
700000 -- (-6281.346) [-6278.812] (-6292.717) (-6279.632) * (-6284.371) [-6278.457] (-6292.217) (-6290.658) -- 0:05:42
Average standard deviation of split frequencies: 0.008275
701000 -- (-6288.949) (-6278.968) [-6278.004] (-6281.735) * (-6280.031) (-6277.167) (-6279.993) [-6281.992] -- 0:05:41
702000 -- [-6282.042] (-6294.357) (-6278.096) (-6280.243) * (-6297.781) (-6294.794) (-6289.620) [-6284.205] -- 0:05:40
703000 -- [-6284.719] (-6288.143) (-6280.308) (-6282.746) * (-6283.943) [-6283.878] (-6296.828) (-6285.741) -- 0:05:39
704000 -- [-6276.286] (-6287.716) (-6290.987) (-6281.050) * (-6291.240) [-6284.500] (-6299.240) (-6280.867) -- 0:05:38
705000 -- (-6275.407) (-6284.908) (-6287.452) [-6286.003] * (-6278.434) (-6288.751) (-6281.496) [-6283.617] -- 0:05:37
Average standard deviation of split frequencies: 0.008413
706000 -- [-6280.527] (-6296.745) (-6299.219) (-6285.196) * (-6281.030) (-6280.969) [-6289.910] (-6282.289) -- 0:05:36
707000 -- [-6279.414] (-6291.535) (-6291.877) (-6289.617) * (-6286.563) (-6286.055) (-6286.141) [-6281.617] -- 0:05:34
708000 -- (-6277.335) (-6291.886) (-6282.450) [-6277.521] * (-6280.515) (-6287.483) (-6286.315) [-6280.729] -- 0:05:33
709000 -- (-6282.686) (-6279.675) [-6281.522] (-6283.756) * (-6288.510) (-6284.002) (-6285.019) [-6291.725] -- 0:05:32
710000 -- [-6288.766] (-6281.682) (-6283.296) (-6285.838) * (-6306.310) [-6289.364] (-6286.826) (-6285.137) -- 0:05:31
Average standard deviation of split frequencies: 0.008225
711000 -- (-6285.669) (-6280.169) [-6285.307] (-6287.845) * [-6289.625] (-6286.116) (-6285.980) (-6284.279) -- 0:05:30
712000 -- (-6281.579) [-6283.980] (-6282.555) (-6274.466) * (-6284.122) (-6281.141) [-6282.364] (-6297.327) -- 0:05:29
713000 -- (-6287.577) (-6281.307) (-6282.134) [-6281.018] * [-6285.506] (-6283.774) (-6281.907) (-6287.419) -- 0:05:28
714000 -- (-6284.265) (-6280.511) [-6288.983] (-6292.740) * [-6282.325] (-6296.189) (-6283.645) (-6280.981) -- 0:05:26
715000 -- (-6285.899) [-6279.785] (-6283.265) (-6291.266) * [-6282.021] (-6284.852) (-6277.615) (-6287.321) -- 0:05:25
Average standard deviation of split frequencies: 0.008625
716000 -- (-6291.780) (-6286.511) (-6285.324) [-6281.476] * (-6285.082) [-6281.374] (-6284.276) (-6292.373) -- 0:05:24
717000 -- (-6285.633) (-6297.240) [-6283.339] (-6284.959) * (-6278.131) [-6294.568] (-6281.701) (-6290.736) -- 0:05:23
718000 -- (-6284.649) (-6291.858) [-6278.948] (-6285.169) * [-6276.151] (-6284.300) (-6283.351) (-6285.856) -- 0:05:22
719000 -- (-6277.546) [-6284.327] (-6282.708) (-6282.542) * (-6280.539) [-6286.985] (-6284.532) (-6285.158) -- 0:05:21
720000 -- (-6287.684) (-6292.973) (-6283.188) [-6279.383] * (-6284.693) (-6284.762) (-6279.207) [-6279.981] -- 0:05:20
Average standard deviation of split frequencies: 0.008438
721000 -- (-6280.685) (-6289.165) [-6280.684] (-6289.351) * (-6283.004) (-6286.821) (-6284.347) [-6283.572] -- 0:05:18
722000 -- (-6275.365) (-6284.680) (-6283.642) [-6281.152] * (-6283.239) [-6280.764] (-6284.704) (-6292.337) -- 0:05:17
723000 -- (-6278.531) (-6281.233) (-6286.817) [-6282.379] * [-6280.608] (-6282.439) (-6285.951) (-6289.452) -- 0:05:16
724000 -- (-6288.283) [-6280.318] (-6282.663) (-6293.535) * (-6288.030) (-6288.806) [-6283.317] (-6277.138) -- 0:05:15
725000 -- (-6282.668) (-6277.911) (-6295.364) [-6276.289] * [-6279.335] (-6279.655) (-6296.763) (-6282.265) -- 0:05:14
Average standard deviation of split frequencies: 0.007662
726000 -- (-6293.207) (-6281.588) (-6292.549) [-6285.139] * [-6282.292] (-6292.598) (-6284.177) (-6285.294) -- 0:05:13
727000 -- (-6286.032) (-6291.372) [-6282.453] (-6288.262) * (-6284.098) (-6282.548) [-6288.378] (-6280.596) -- 0:05:12
728000 -- [-6274.568] (-6285.090) (-6296.644) (-6281.127) * (-6287.597) (-6291.190) (-6285.680) [-6279.362] -- 0:05:10
729000 -- [-6278.231] (-6282.553) (-6292.543) (-6283.689) * [-6281.542] (-6290.350) (-6279.933) (-6286.518) -- 0:05:09
730000 -- (-6288.123) [-6283.612] (-6283.961) (-6294.937) * [-6286.050] (-6289.899) (-6291.159) (-6278.845) -- 0:05:08
Average standard deviation of split frequencies: 0.007419
731000 -- [-6289.592] (-6280.397) (-6279.998) (-6284.272) * (-6280.381) [-6283.972] (-6289.888) (-6285.795) -- 0:05:07
732000 -- (-6276.966) (-6289.200) [-6281.022] (-6289.826) * [-6277.925] (-6289.392) (-6278.132) (-6289.562) -- 0:05:06
733000 -- (-6292.755) (-6280.593) (-6294.167) [-6280.742] * (-6281.359) [-6279.410] (-6279.498) (-6282.721) -- 0:05:05
734000 -- (-6283.628) (-6288.807) [-6286.557] (-6283.149) * (-6282.668) (-6286.316) [-6284.391] (-6287.206) -- 0:05:04
735000 -- (-6282.689) [-6281.846] (-6281.760) (-6277.866) * (-6279.285) [-6280.096] (-6284.569) (-6288.317) -- 0:05:02
Average standard deviation of split frequencies: 0.006917
736000 -- (-6283.211) (-6288.920) (-6281.370) [-6278.070] * (-6275.320) (-6279.311) [-6289.560] (-6280.815) -- 0:05:01
737000 -- (-6281.639) (-6297.172) [-6287.883] (-6286.048) * (-6275.246) (-6282.513) [-6280.264] (-6285.781) -- 0:05:00
738000 -- [-6281.231] (-6291.250) (-6286.138) (-6289.097) * (-6302.238) [-6285.747] (-6278.428) (-6292.197) -- 0:04:59
739000 -- (-6276.746) (-6276.421) [-6285.539] (-6298.269) * [-6278.523] (-6278.644) (-6291.154) (-6288.351) -- 0:04:58
740000 -- [-6290.119] (-6284.847) (-6281.945) (-6287.403) * (-6281.699) [-6281.944] (-6288.588) (-6283.731) -- 0:04:57
Average standard deviation of split frequencies: 0.006746
741000 -- (-6290.095) (-6281.061) (-6287.959) [-6281.537] * [-6280.416] (-6283.707) (-6280.166) (-6277.900) -- 0:04:56
742000 -- (-6292.408) (-6276.230) [-6280.093] (-6277.249) * (-6284.521) [-6281.702] (-6279.818) (-6285.018) -- 0:04:54
743000 -- (-6281.161) (-6286.251) (-6280.081) [-6284.200] * (-6288.474) [-6274.097] (-6286.711) (-6291.725) -- 0:04:53
744000 -- (-6273.752) (-6279.496) (-6281.529) [-6285.052] * [-6276.177] (-6282.486) (-6292.854) (-6288.377) -- 0:04:52
745000 -- (-6285.801) (-6280.818) [-6285.670] (-6282.740) * [-6286.644] (-6284.334) (-6284.484) (-6291.148) -- 0:04:51
Average standard deviation of split frequencies: 0.007077
746000 -- (-6287.857) (-6287.283) [-6280.939] (-6287.265) * (-6282.127) [-6275.558] (-6286.867) (-6286.501) -- 0:04:50
747000 -- (-6291.869) (-6281.317) (-6284.874) [-6280.008] * [-6285.210] (-6289.138) (-6294.974) (-6280.420) -- 0:04:49
748000 -- (-6279.681) [-6282.493] (-6278.944) (-6281.089) * [-6287.304] (-6277.032) (-6284.379) (-6278.984) -- 0:04:48
749000 -- (-6284.954) (-6288.301) (-6282.494) [-6278.850] * (-6291.227) (-6276.120) (-6285.012) [-6283.344] -- 0:04:46
750000 -- (-6284.359) [-6285.478] (-6286.044) (-6291.491) * (-6287.231) (-6292.501) (-6283.432) [-6284.435] -- 0:04:45
Average standard deviation of split frequencies: 0.007599
751000 -- (-6280.610) (-6276.429) [-6279.796] (-6290.724) * [-6281.049] (-6287.063) (-6288.146) (-6278.353) -- 0:04:44
752000 -- [-6284.875] (-6284.700) (-6281.588) (-6285.006) * (-6288.508) (-6286.864) [-6284.300] (-6286.384) -- 0:04:43
753000 -- (-6293.696) (-6285.745) [-6281.408] (-6288.062) * (-6284.537) (-6278.920) [-6283.199] (-6296.200) -- 0:04:42
754000 -- (-6292.876) (-6284.280) (-6281.478) [-6284.273] * (-6280.082) [-6285.456] (-6288.763) (-6284.768) -- 0:04:41
755000 -- (-6292.923) [-6284.545] (-6287.866) (-6293.655) * [-6283.752] (-6280.907) (-6283.586) (-6288.546) -- 0:04:40
Average standard deviation of split frequencies: 0.007545
756000 -- (-6290.016) (-6284.306) [-6278.013] (-6278.629) * (-6288.172) [-6286.496] (-6287.473) (-6282.965) -- 0:04:38
757000 -- (-6283.689) (-6281.552) (-6278.973) [-6277.130] * (-6283.818) [-6282.462] (-6285.909) (-6281.905) -- 0:04:37
758000 -- (-6280.053) (-6293.891) (-6288.929) [-6281.161] * (-6288.082) (-6289.036) (-6282.435) [-6279.324] -- 0:04:36
759000 -- [-6280.454] (-6293.671) (-6289.638) (-6279.236) * (-6287.098) (-6287.535) [-6279.186] (-6280.182) -- 0:04:35
760000 -- (-6281.626) (-6277.954) [-6277.179] (-6286.004) * (-6286.929) (-6282.273) [-6282.003] (-6278.120) -- 0:04:34
Average standard deviation of split frequencies: 0.007871
761000 -- [-6283.233] (-6285.542) (-6279.901) (-6286.045) * (-6283.355) [-6279.240] (-6295.360) (-6286.590) -- 0:04:33
762000 -- (-6283.843) (-6290.609) [-6292.362] (-6285.951) * [-6279.157] (-6282.244) (-6288.290) (-6292.362) -- 0:04:32
763000 -- (-6285.448) [-6279.721] (-6284.116) (-6292.566) * (-6282.303) (-6278.653) [-6286.743] (-6287.907) -- 0:04:30
764000 -- [-6275.932] (-6287.458) (-6285.777) (-6290.368) * (-6285.897) [-6280.849] (-6280.798) (-6281.666) -- 0:04:29
765000 -- (-6283.812) (-6288.955) (-6287.717) [-6283.733] * (-6290.446) (-6286.068) [-6282.086] (-6299.353) -- 0:04:28
Average standard deviation of split frequencies: 0.008062
766000 -- [-6277.612] (-6302.279) (-6283.785) (-6286.335) * (-6286.460) (-6277.719) [-6279.824] (-6278.464) -- 0:04:27
767000 -- (-6286.253) [-6284.206] (-6302.666) (-6277.244) * (-6287.482) (-6276.266) (-6282.063) [-6278.986] -- 0:04:26
768000 -- (-6284.829) (-6287.209) (-6298.845) [-6277.480] * (-6282.584) (-6284.485) (-6280.017) [-6276.623] -- 0:04:25
769000 -- (-6286.293) (-6288.769) (-6278.446) [-6280.171] * [-6280.544] (-6280.106) (-6284.641) (-6288.904) -- 0:04:24
770000 -- (-6285.820) (-6280.449) (-6294.383) [-6276.150] * (-6286.640) (-6285.463) (-6289.284) [-6287.321] -- 0:04:22
Average standard deviation of split frequencies: 0.008074
771000 -- (-6276.521) (-6286.143) [-6282.275] (-6291.587) * (-6289.396) [-6287.097] (-6287.293) (-6282.594) -- 0:04:21
772000 -- (-6287.424) (-6297.077) (-6277.756) [-6279.299] * [-6278.510] (-6289.601) (-6277.490) (-6284.550) -- 0:04:20
773000 -- (-6284.513) (-6280.817) (-6286.237) [-6285.582] * [-6282.864] (-6280.310) (-6284.048) (-6290.649) -- 0:04:19
774000 -- (-6277.650) (-6288.973) [-6281.068] (-6282.828) * (-6281.021) [-6291.454] (-6292.741) (-6280.614) -- 0:04:18
775000 -- (-6288.913) [-6285.702] (-6286.256) (-6285.243) * (-6285.947) (-6277.696) (-6292.164) [-6286.197] -- 0:04:17
Average standard deviation of split frequencies: 0.008079
776000 -- (-6281.677) [-6282.463] (-6285.627) (-6280.319) * (-6281.685) (-6282.404) (-6278.885) [-6278.427] -- 0:04:16
777000 -- (-6288.046) [-6277.535] (-6288.433) (-6279.156) * (-6279.898) (-6287.574) (-6283.888) [-6282.414] -- 0:04:14
778000 -- [-6281.341] (-6280.625) (-6286.482) (-6280.880) * (-6280.527) (-6282.240) [-6281.305] (-6282.136) -- 0:04:13
779000 -- (-6283.916) (-6295.153) [-6276.415] (-6282.907) * (-6289.811) [-6280.307] (-6284.641) (-6284.005) -- 0:04:12
780000 -- [-6277.624] (-6292.428) (-6285.663) (-6292.694) * (-6280.704) (-6281.358) [-6280.946] (-6287.982) -- 0:04:11
Average standard deviation of split frequencies: 0.007488
781000 -- [-6279.351] (-6284.862) (-6286.678) (-6278.878) * (-6306.302) (-6284.410) [-6272.401] (-6288.008) -- 0:04:10
782000 -- (-6283.438) (-6285.200) [-6284.898] (-6279.097) * (-6287.771) (-6281.441) (-6284.667) [-6284.376] -- 0:04:09
783000 -- (-6280.774) (-6288.005) [-6282.081] (-6282.355) * (-6284.994) [-6283.643] (-6282.859) (-6289.347) -- 0:04:08
784000 -- (-6287.927) (-6278.130) (-6280.935) [-6276.949] * (-6280.424) [-6275.363] (-6282.115) (-6280.070) -- 0:04:06
785000 -- (-6278.249) [-6285.419] (-6284.864) (-6280.158) * (-6276.129) (-6275.118) [-6284.136] (-6284.335) -- 0:04:05
Average standard deviation of split frequencies: 0.007917
786000 -- (-6279.670) [-6282.492] (-6292.302) (-6286.599) * (-6280.838) (-6278.535) (-6283.988) [-6277.253] -- 0:04:04
787000 -- (-6286.973) (-6279.822) (-6280.878) [-6279.308] * (-6277.434) [-6277.414] (-6283.323) (-6288.576) -- 0:04:03
788000 -- (-6282.283) [-6281.791] (-6292.879) (-6286.104) * (-6283.043) (-6282.951) [-6279.464] (-6284.044) -- 0:04:02
789000 -- (-6287.067) [-6280.884] (-6291.550) (-6284.466) * (-6286.280) (-6307.880) [-6281.076] (-6283.021) -- 0:04:01
790000 -- (-6285.115) (-6281.916) (-6285.388) [-6277.701] * (-6289.156) (-6298.614) [-6285.796] (-6285.011) -- 0:04:00
Average standard deviation of split frequencies: 0.007691
791000 -- (-6287.719) (-6281.531) (-6277.912) [-6282.406] * [-6281.934] (-6284.286) (-6288.057) (-6291.183) -- 0:03:58
792000 -- (-6288.227) [-6279.920] (-6284.594) (-6295.358) * [-6281.954] (-6284.477) (-6296.226) (-6287.986) -- 0:03:57
793000 -- (-6278.489) (-6285.249) [-6288.654] (-6286.798) * (-6289.597) (-6290.949) [-6274.620] (-6291.177) -- 0:03:56
794000 -- (-6283.075) (-6287.191) (-6275.833) [-6283.215] * (-6290.509) (-6284.562) (-6287.558) [-6283.111] -- 0:03:55
795000 -- (-6276.990) [-6281.571] (-6278.973) (-6280.485) * (-6275.181) (-6286.269) (-6280.751) [-6274.813] -- 0:03:54
Average standard deviation of split frequencies: 0.007521
796000 -- (-6284.312) [-6275.481] (-6284.185) (-6281.142) * [-6277.129] (-6290.989) (-6290.115) (-6284.471) -- 0:03:53
797000 -- (-6279.430) (-6281.225) [-6282.031] (-6283.361) * (-6283.180) (-6294.062) (-6287.281) [-6284.452] -- 0:03:52
798000 -- (-6279.139) (-6294.280) [-6280.710] (-6283.088) * [-6279.462] (-6290.811) (-6293.438) (-6278.109) -- 0:03:50
799000 -- (-6286.526) (-6286.852) [-6276.939] (-6289.243) * [-6282.174] (-6288.213) (-6286.138) (-6280.295) -- 0:03:49
800000 -- (-6282.798) (-6286.843) [-6288.463] (-6291.370) * (-6281.616) (-6289.809) [-6284.002] (-6282.021) -- 0:03:48
Average standard deviation of split frequencies: 0.007242
801000 -- [-6283.833] (-6288.305) (-6281.889) (-6295.811) * [-6286.591] (-6278.566) (-6285.018) (-6283.930) -- 0:03:47
802000 -- (-6288.494) [-6290.952] (-6291.616) (-6286.644) * (-6281.274) (-6285.901) (-6282.469) [-6280.783] -- 0:03:46
803000 -- (-6278.903) (-6282.492) (-6282.887) [-6278.072] * [-6279.875] (-6287.771) (-6294.870) (-6276.882) -- 0:03:45
804000 -- (-6281.129) (-6285.719) [-6276.175] (-6299.188) * (-6282.378) [-6285.344] (-6287.814) (-6283.876) -- 0:03:44
805000 -- (-6279.326) (-6285.736) [-6282.292] (-6289.538) * (-6283.613) (-6282.025) (-6289.416) [-6282.813] -- 0:03:42
Average standard deviation of split frequencies: 0.006784
806000 -- (-6286.341) (-6292.722) (-6282.001) [-6282.990] * [-6286.028] (-6296.299) (-6287.920) (-6283.968) -- 0:03:41
807000 -- (-6293.076) (-6289.022) [-6282.330] (-6292.375) * (-6287.076) (-6284.934) [-6273.443] (-6286.656) -- 0:03:40
808000 -- (-6283.035) [-6289.306] (-6280.724) (-6288.945) * (-6282.739) (-6282.351) [-6280.535] (-6290.991) -- 0:03:39
809000 -- [-6278.484] (-6286.490) (-6285.583) (-6278.516) * (-6281.451) (-6277.654) (-6291.682) [-6275.743] -- 0:03:38
810000 -- (-6291.818) (-6291.179) (-6285.999) [-6279.690] * (-6289.567) (-6280.616) [-6279.110] (-6288.669) -- 0:03:37
Average standard deviation of split frequencies: 0.005989
811000 -- [-6283.467] (-6286.540) (-6283.812) (-6277.907) * (-6284.126) (-6276.938) [-6281.213] (-6286.502) -- 0:03:36
812000 -- (-6279.307) [-6294.154] (-6278.496) (-6284.554) * (-6281.058) (-6285.780) [-6278.295] (-6288.503) -- 0:03:34
813000 -- [-6281.974] (-6294.246) (-6281.577) (-6295.570) * (-6282.434) [-6276.630] (-6288.100) (-6288.646) -- 0:03:33
814000 -- (-6283.893) [-6292.745] (-6281.028) (-6291.932) * (-6280.889) [-6281.695] (-6292.624) (-6294.383) -- 0:03:32
815000 -- [-6282.646] (-6288.025) (-6293.214) (-6293.168) * [-6279.273] (-6296.326) (-6282.437) (-6281.818) -- 0:03:31
Average standard deviation of split frequencies: 0.006124
816000 -- (-6286.464) (-6276.973) (-6282.719) [-6298.893] * (-6289.593) [-6284.173] (-6285.620) (-6289.390) -- 0:03:30
817000 -- (-6281.170) (-6275.744) (-6285.629) [-6284.467] * (-6282.526) (-6282.248) [-6280.570] (-6285.884) -- 0:03:29
818000 -- (-6292.363) [-6282.297] (-6285.784) (-6283.111) * (-6279.361) [-6287.771] (-6289.324) (-6283.225) -- 0:03:28
819000 -- (-6280.367) (-6287.984) [-6283.786] (-6289.990) * (-6287.438) [-6279.129] (-6282.943) (-6285.346) -- 0:03:26
820000 -- (-6279.222) [-6271.562] (-6291.110) (-6298.733) * (-6288.460) (-6277.093) [-6282.426] (-6283.729) -- 0:03:25
Average standard deviation of split frequencies: 0.006319
821000 -- (-6286.462) [-6290.951] (-6279.872) (-6293.208) * (-6281.725) (-6292.020) [-6278.854] (-6291.875) -- 0:03:24
822000 -- [-6276.529] (-6283.115) (-6278.526) (-6291.312) * (-6286.220) (-6285.441) [-6285.125] (-6287.466) -- 0:03:23
823000 -- (-6289.839) (-6291.752) [-6281.785] (-6302.516) * (-6281.271) [-6277.973] (-6284.930) (-6283.662) -- 0:03:22
824000 -- (-6295.882) (-6293.192) [-6281.992] (-6296.142) * (-6287.836) [-6287.419] (-6279.747) (-6284.807) -- 0:03:21
825000 -- [-6284.616] (-6280.211) (-6278.043) (-6297.718) * (-6287.774) [-6280.288] (-6289.766) (-6285.612) -- 0:03:20
Average standard deviation of split frequencies: 0.006449
826000 -- (-6295.417) (-6288.127) [-6281.525] (-6283.148) * (-6277.915) (-6294.446) [-6282.966] (-6280.617) -- 0:03:18
827000 -- (-6289.177) (-6291.545) (-6290.900) [-6275.923] * (-6277.288) (-6301.768) [-6279.023] (-6290.287) -- 0:03:17
828000 -- [-6289.103] (-6287.494) (-6288.097) (-6276.347) * (-6282.048) (-6293.772) (-6282.576) [-6290.054] -- 0:03:16
829000 -- (-6289.924) (-6290.621) (-6287.531) [-6289.311] * (-6289.604) (-6282.790) (-6290.345) [-6286.137] -- 0:03:15
830000 -- (-6282.469) (-6287.359) (-6280.518) [-6287.403] * (-6295.959) (-6287.566) [-6281.225] (-6276.200) -- 0:03:14
Average standard deviation of split frequencies: 0.006526
831000 -- (-6290.978) [-6278.092] (-6286.368) (-6280.919) * (-6292.699) [-6286.189] (-6290.092) (-6287.053) -- 0:03:13
832000 -- (-6279.472) (-6287.229) [-6276.291] (-6280.687) * [-6284.761] (-6295.391) (-6287.414) (-6289.227) -- 0:03:12
833000 -- (-6290.600) [-6276.801] (-6281.734) (-6285.864) * (-6287.077) [-6285.307] (-6284.946) (-6289.887) -- 0:03:10
834000 -- (-6294.596) (-6281.451) [-6276.100] (-6283.444) * (-6300.298) [-6273.513] (-6281.238) (-6286.629) -- 0:03:09
835000 -- (-6282.913) (-6283.208) (-6281.352) [-6280.155] * (-6288.783) (-6283.383) (-6276.403) [-6282.045] -- 0:03:08
Average standard deviation of split frequencies: 0.007105
836000 -- (-6279.445) (-6285.735) (-6284.636) [-6284.660] * (-6295.208) (-6277.033) [-6284.357] (-6284.926) -- 0:03:07
837000 -- (-6288.033) (-6274.734) [-6284.256] (-6290.665) * [-6286.185] (-6276.957) (-6283.614) (-6282.296) -- 0:03:06
838000 -- (-6285.055) [-6277.409] (-6282.559) (-6281.019) * (-6282.786) [-6291.079] (-6283.614) (-6280.025) -- 0:03:05
839000 -- (-6281.622) (-6279.593) [-6276.695] (-6279.109) * (-6286.364) [-6274.897] (-6281.290) (-6278.087) -- 0:03:04
840000 -- (-6281.935) (-6283.030) [-6284.551] (-6283.611) * (-6276.790) (-6289.819) (-6282.714) [-6275.319] -- 0:03:02
Average standard deviation of split frequencies: 0.006505
841000 -- (-6281.465) (-6283.758) (-6294.638) [-6277.434] * [-6282.202] (-6280.018) (-6282.293) (-6290.422) -- 0:03:01
842000 -- (-6284.159) (-6282.748) [-6283.460] (-6283.841) * [-6287.264] (-6282.736) (-6278.026) (-6281.283) -- 0:03:00
843000 -- (-6283.481) [-6285.094] (-6294.515) (-6284.015) * (-6287.186) (-6281.201) (-6286.550) [-6281.036] -- 0:02:59
844000 -- (-6283.160) (-6281.224) (-6283.256) [-6274.990] * (-6277.394) [-6285.455] (-6285.816) (-6283.883) -- 0:02:58
845000 -- (-6282.379) (-6286.985) [-6281.428] (-6280.533) * (-6282.767) [-6281.154] (-6284.535) (-6283.986) -- 0:02:57
Average standard deviation of split frequencies: 0.006129
846000 -- (-6279.704) (-6287.805) [-6284.443] (-6273.937) * [-6282.962] (-6282.085) (-6284.431) (-6283.544) -- 0:02:56
847000 -- (-6287.451) (-6288.025) (-6284.797) [-6279.695] * (-6279.794) (-6287.063) (-6284.760) [-6286.271] -- 0:02:54
848000 -- (-6283.902) (-6287.977) (-6280.560) [-6284.480] * (-6280.905) [-6281.245] (-6281.982) (-6279.490) -- 0:02:53
849000 -- (-6287.646) (-6283.393) (-6280.093) [-6283.620] * (-6278.500) (-6291.317) [-6279.712] (-6282.688) -- 0:02:52
850000 -- (-6281.812) (-6285.776) (-6279.882) [-6280.512] * (-6276.426) [-6286.005] (-6296.370) (-6279.013) -- 0:02:51
Average standard deviation of split frequencies: 0.006151
851000 -- (-6292.450) (-6283.824) [-6284.900] (-6278.065) * [-6281.357] (-6290.325) (-6281.714) (-6281.873) -- 0:02:50
852000 -- [-6286.204] (-6284.979) (-6287.066) (-6289.527) * (-6283.608) (-6287.041) (-6286.791) [-6277.373] -- 0:02:49
853000 -- [-6274.407] (-6277.398) (-6280.475) (-6291.357) * (-6284.853) (-6291.060) (-6282.078) [-6283.774] -- 0:02:48
854000 -- (-6282.773) (-6288.545) [-6279.971] (-6287.518) * (-6287.140) [-6275.021] (-6284.397) (-6281.956) -- 0:02:46
855000 -- (-6292.381) (-6281.757) (-6295.008) [-6280.566] * (-6291.275) [-6277.953] (-6286.010) (-6279.704) -- 0:02:45
Average standard deviation of split frequencies: 0.005672
856000 -- (-6282.300) [-6290.755] (-6294.489) (-6284.445) * (-6290.151) [-6278.944] (-6289.671) (-6283.589) -- 0:02:44
857000 -- (-6279.468) (-6287.827) [-6283.394] (-6290.412) * (-6284.977) [-6279.420] (-6285.335) (-6283.388) -- 0:02:43
858000 -- (-6287.055) [-6287.030] (-6292.173) (-6297.606) * (-6288.739) [-6284.781] (-6282.337) (-6284.670) -- 0:02:42
859000 -- (-6278.036) (-6289.146) (-6283.337) [-6288.404] * (-6295.051) [-6280.544] (-6291.960) (-6278.668) -- 0:02:41
860000 -- (-6288.777) (-6294.252) (-6279.974) [-6273.221] * (-6290.428) [-6282.426] (-6284.725) (-6277.827) -- 0:02:40
Average standard deviation of split frequencies: 0.004929
861000 -- (-6286.778) (-6283.215) [-6278.574] (-6282.356) * (-6284.572) [-6276.223] (-6286.081) (-6285.299) -- 0:02:38
862000 -- (-6292.897) [-6284.159] (-6276.620) (-6292.955) * (-6280.008) (-6286.420) (-6285.666) [-6288.019] -- 0:02:37
863000 -- (-6281.869) (-6280.058) (-6293.120) [-6287.655] * (-6282.722) (-6288.588) [-6278.722] (-6290.145) -- 0:02:36
864000 -- (-6285.729) (-6296.454) [-6279.141] (-6280.242) * (-6277.549) (-6281.738) (-6276.656) [-6279.422] -- 0:02:35
865000 -- (-6285.526) [-6280.571] (-6282.220) (-6276.476) * (-6285.605) [-6278.127] (-6286.532) (-6278.121) -- 0:02:34
Average standard deviation of split frequencies: 0.005335
866000 -- (-6287.893) (-6285.470) [-6281.044] (-6284.625) * (-6285.752) (-6289.854) [-6283.101] (-6276.759) -- 0:02:33
867000 -- (-6288.698) (-6284.946) [-6281.292] (-6286.027) * (-6294.895) (-6282.701) (-6291.070) [-6277.923] -- 0:02:32
868000 -- (-6284.002) (-6287.130) (-6287.534) [-6280.240] * (-6286.477) (-6277.602) [-6287.253] (-6279.025) -- 0:02:30
869000 -- (-6281.084) (-6281.724) (-6290.811) [-6287.769] * (-6283.318) [-6283.368] (-6279.326) (-6282.362) -- 0:02:29
870000 -- (-6282.714) (-6274.529) (-6284.849) [-6281.639] * [-6281.356] (-6293.292) (-6284.242) (-6291.208) -- 0:02:28
Average standard deviation of split frequencies: 0.005739
871000 -- (-6279.687) [-6281.331] (-6285.105) (-6294.300) * (-6279.869) (-6291.232) (-6277.717) [-6278.822] -- 0:02:27
872000 -- (-6301.727) (-6283.305) (-6286.312) [-6277.434] * (-6286.898) (-6282.298) (-6297.297) [-6276.348] -- 0:02:26
873000 -- (-6289.224) [-6278.115] (-6281.856) (-6277.064) * [-6286.382] (-6286.652) (-6276.317) (-6291.457) -- 0:02:25
874000 -- (-6279.413) [-6281.305] (-6280.145) (-6282.164) * (-6284.853) (-6288.307) [-6272.921] (-6288.023) -- 0:02:24
875000 -- (-6284.173) (-6282.858) [-6286.190] (-6282.085) * (-6285.088) (-6285.979) (-6286.777) [-6281.926] -- 0:02:22
Average standard deviation of split frequencies: 0.005973
876000 -- [-6282.281] (-6283.529) (-6288.618) (-6283.489) * (-6284.162) [-6282.620] (-6286.852) (-6280.732) -- 0:02:21
877000 -- [-6279.695] (-6278.036) (-6279.978) (-6280.689) * (-6283.937) [-6277.209] (-6284.451) (-6279.128) -- 0:02:20
878000 -- (-6287.190) [-6278.177] (-6287.414) (-6286.959) * (-6276.724) [-6282.411] (-6283.810) (-6285.301) -- 0:02:19
879000 -- (-6287.221) [-6280.687] (-6285.495) (-6293.171) * (-6281.762) [-6279.133] (-6295.610) (-6284.682) -- 0:02:18
880000 -- (-6293.034) (-6291.774) [-6279.161] (-6290.948) * (-6289.410) [-6288.527] (-6284.699) (-6285.021) -- 0:02:17
Average standard deviation of split frequencies: 0.005728
881000 -- (-6289.865) (-6283.094) [-6277.510] (-6284.884) * (-6289.836) (-6282.004) [-6282.803] (-6280.812) -- 0:02:16
882000 -- (-6287.594) [-6279.436] (-6278.679) (-6284.386) * (-6283.921) [-6285.988] (-6288.421) (-6282.988) -- 0:02:14
883000 -- (-6293.487) (-6283.889) [-6278.541] (-6284.617) * [-6280.586] (-6287.198) (-6289.793) (-6291.272) -- 0:02:13
884000 -- (-6286.139) [-6281.129] (-6280.828) (-6280.376) * (-6277.151) (-6284.237) (-6286.569) [-6285.326] -- 0:02:12
885000 -- (-6280.981) (-6277.236) (-6291.364) [-6297.836] * [-6286.913] (-6290.691) (-6277.432) (-6281.400) -- 0:02:11
Average standard deviation of split frequencies: 0.006012
886000 -- (-6283.058) [-6280.159] (-6283.844) (-6286.236) * [-6282.509] (-6280.368) (-6280.577) (-6276.577) -- 0:02:10
887000 -- (-6278.464) (-6280.932) [-6282.836] (-6286.704) * (-6281.115) (-6293.678) [-6281.584] (-6282.930) -- 0:02:09
888000 -- (-6284.165) [-6278.571] (-6286.783) (-6283.306) * (-6280.673) (-6287.276) [-6281.866] (-6282.597) -- 0:02:08
889000 -- (-6290.717) (-6281.905) [-6277.679] (-6290.636) * (-6277.918) (-6289.470) (-6285.846) [-6283.118] -- 0:02:06
890000 -- (-6278.861) (-6288.222) [-6282.242] (-6289.095) * (-6279.945) [-6281.183] (-6281.878) (-6287.922) -- 0:02:05
Average standard deviation of split frequencies: 0.006192
891000 -- [-6284.930] (-6279.241) (-6290.179) (-6287.367) * (-6280.400) (-6280.912) [-6277.674] (-6286.314) -- 0:02:04
892000 -- (-6275.461) (-6293.223) (-6290.355) [-6278.367] * [-6277.891] (-6279.928) (-6284.575) (-6285.401) -- 0:02:03
893000 -- [-6282.054] (-6283.144) (-6284.233) (-6285.998) * (-6279.269) (-6284.851) [-6280.668] (-6286.527) -- 0:02:02
894000 -- (-6280.792) [-6277.653] (-6278.466) (-6283.040) * (-6290.020) (-6288.506) [-6280.496] (-6277.610) -- 0:02:01
895000 -- [-6281.195] (-6284.043) (-6280.114) (-6275.247) * (-6281.661) (-6316.383) [-6287.355] (-6289.132) -- 0:02:00
Average standard deviation of split frequencies: 0.006261
896000 -- (-6281.903) (-6282.930) [-6285.349] (-6283.456) * (-6274.127) [-6283.634] (-6290.326) (-6282.296) -- 0:01:58
897000 -- (-6273.746) (-6281.952) (-6304.443) [-6279.127] * (-6278.601) (-6282.175) [-6283.796] (-6288.571) -- 0:01:57
898000 -- (-6277.771) [-6277.866] (-6285.570) (-6292.336) * (-6288.047) [-6278.503] (-6282.959) (-6285.012) -- 0:01:56
899000 -- (-6273.819) (-6289.742) [-6276.994] (-6292.451) * (-6287.306) (-6285.753) (-6293.306) [-6287.012] -- 0:01:55
900000 -- (-6282.555) [-6280.735] (-6271.300) (-6285.181) * [-6286.262] (-6298.220) (-6288.282) (-6281.289) -- 0:01:54
Average standard deviation of split frequencies: 0.006333
901000 -- [-6279.061] (-6284.021) (-6284.321) (-6290.235) * (-6279.764) (-6292.115) [-6284.096] (-6289.494) -- 0:01:53
902000 -- (-6292.058) (-6284.518) (-6276.153) [-6276.762] * (-6282.211) (-6280.737) [-6281.349] (-6283.874) -- 0:01:52
903000 -- [-6284.186] (-6281.000) (-6291.765) (-6298.456) * (-6281.069) [-6277.984] (-6285.772) (-6283.190) -- 0:01:50
904000 -- (-6276.568) (-6280.236) [-6280.333] (-6288.555) * (-6282.916) [-6285.720] (-6289.829) (-6288.439) -- 0:01:49
905000 -- [-6277.396] (-6280.198) (-6276.550) (-6283.658) * (-6285.079) (-6282.361) (-6283.307) [-6283.737] -- 0:01:48
Average standard deviation of split frequencies: 0.006192
906000 -- [-6291.158] (-6289.761) (-6282.695) (-6293.625) * (-6279.080) (-6287.192) (-6290.135) [-6288.161] -- 0:01:47
907000 -- (-6283.845) [-6280.649] (-6281.309) (-6283.356) * (-6285.042) (-6296.283) (-6280.235) [-6280.778] -- 0:01:46
908000 -- (-6282.890) (-6277.410) (-6283.365) [-6279.321] * (-6277.402) (-6282.666) (-6282.230) [-6281.345] -- 0:01:45
909000 -- (-6283.464) (-6280.252) [-6281.816] (-6287.207) * (-6287.520) [-6281.701] (-6281.326) (-6282.770) -- 0:01:44
910000 -- [-6276.024] (-6289.530) (-6287.173) (-6278.953) * [-6284.939] (-6282.928) (-6282.830) (-6280.631) -- 0:01:42
Average standard deviation of split frequencies: 0.006315
911000 -- (-6275.945) (-6284.736) (-6278.528) [-6288.937] * (-6281.078) (-6275.777) [-6286.100] (-6290.505) -- 0:01:41
912000 -- (-6290.087) [-6286.211] (-6282.299) (-6304.612) * (-6278.251) [-6282.527] (-6281.910) (-6290.928) -- 0:01:40
913000 -- (-6286.632) [-6289.047] (-6279.304) (-6284.798) * (-6277.951) (-6293.171) [-6280.454] (-6284.883) -- 0:01:39
914000 -- (-6281.875) (-6276.629) [-6283.680] (-6283.967) * (-6287.062) (-6281.708) (-6279.758) [-6283.227] -- 0:01:38
915000 -- (-6283.074) (-6282.755) [-6278.422] (-6298.072) * (-6277.811) (-6288.457) [-6279.714] (-6279.860) -- 0:01:37
Average standard deviation of split frequencies: 0.006124
916000 -- (-6289.888) [-6279.745] (-6280.398) (-6294.059) * (-6284.361) (-6286.112) (-6286.846) [-6276.996] -- 0:01:36
917000 -- (-6283.778) (-6288.118) (-6287.782) [-6278.722] * (-6285.959) (-6286.125) (-6287.862) [-6280.802] -- 0:01:34
918000 -- (-6276.123) (-6281.032) (-6291.091) [-6278.828] * [-6282.309] (-6291.004) (-6290.085) (-6277.366) -- 0:01:33
919000 -- (-6294.994) [-6283.159] (-6283.099) (-6291.227) * (-6283.967) [-6286.240] (-6284.630) (-6285.041) -- 0:01:32
920000 -- [-6281.521] (-6284.520) (-6277.588) (-6293.613) * [-6284.966] (-6291.538) (-6282.191) (-6281.999) -- 0:01:31
Average standard deviation of split frequencies: 0.005837
921000 -- (-6277.628) (-6288.069) [-6275.313] (-6280.862) * (-6280.491) (-6283.194) [-6289.842] (-6285.023) -- 0:01:30
922000 -- (-6290.540) [-6279.482] (-6276.429) (-6280.224) * (-6279.071) (-6279.248) [-6278.234] (-6289.543) -- 0:01:29
923000 -- [-6283.084] (-6287.410) (-6294.751) (-6283.260) * (-6293.479) [-6276.082] (-6280.719) (-6284.909) -- 0:01:28
924000 -- [-6279.889] (-6283.661) (-6276.493) (-6288.536) * (-6282.037) (-6287.904) [-6275.230] (-6284.548) -- 0:01:26
925000 -- [-6280.294] (-6284.776) (-6293.559) (-6293.647) * (-6280.448) (-6281.225) (-6294.026) [-6280.452] -- 0:01:25
Average standard deviation of split frequencies: 0.005803
926000 -- (-6290.201) (-6285.199) [-6283.034] (-6281.246) * (-6278.071) (-6282.347) [-6277.175] (-6282.763) -- 0:01:24
927000 -- (-6284.817) (-6287.442) (-6290.491) [-6275.411] * [-6282.803] (-6285.656) (-6286.225) (-6290.125) -- 0:01:23
928000 -- (-6280.192) (-6288.115) (-6287.310) [-6278.156] * [-6282.278] (-6297.550) (-6290.022) (-6288.140) -- 0:01:22
929000 -- (-6290.481) [-6276.925] (-6279.844) (-6279.205) * (-6287.478) (-6282.796) (-6284.324) [-6282.387] -- 0:01:21
930000 -- (-6286.146) (-6289.758) [-6277.092] (-6287.516) * (-6280.200) [-6281.828] (-6278.645) (-6290.752) -- 0:01:20
Average standard deviation of split frequencies: 0.006180
931000 -- (-6283.955) (-6288.177) [-6278.398] (-6284.149) * (-6292.448) (-6287.211) [-6283.034] (-6283.975) -- 0:01:18
932000 -- (-6281.965) (-6286.086) (-6283.473) [-6278.097] * (-6286.385) (-6278.467) [-6278.791] (-6285.407) -- 0:01:17
933000 -- (-6285.528) (-6284.923) [-6286.789] (-6283.393) * (-6287.823) (-6285.228) [-6292.669] (-6292.057) -- 0:01:16
934000 -- (-6286.455) [-6283.147] (-6281.817) (-6288.260) * (-6299.711) (-6290.190) [-6283.480] (-6288.735) -- 0:01:15
935000 -- (-6294.052) (-6289.702) (-6283.813) [-6281.087] * (-6288.461) (-6278.798) [-6274.252] (-6285.085) -- 0:01:14
Average standard deviation of split frequencies: 0.006698
936000 -- [-6291.059] (-6295.666) (-6287.639) (-6289.880) * (-6284.773) (-6278.433) (-6290.524) [-6281.408] -- 0:01:13
937000 -- (-6287.934) [-6283.315] (-6282.984) (-6287.587) * (-6291.831) (-6288.853) [-6280.902] (-6278.269) -- 0:01:12
938000 -- (-6289.429) (-6282.439) [-6279.638] (-6282.856) * (-6292.295) [-6284.404] (-6288.123) (-6277.282) -- 0:01:10
939000 -- [-6278.525] (-6287.184) (-6285.837) (-6283.401) * (-6287.674) [-6285.510] (-6284.113) (-6285.295) -- 0:01:09
940000 -- (-6282.285) (-6285.684) (-6279.109) [-6284.117] * (-6279.826) (-6288.620) [-6281.816] (-6280.416) -- 0:01:08
Average standard deviation of split frequencies: 0.006465
941000 -- (-6278.733) [-6283.707] (-6278.469) (-6278.546) * [-6277.651] (-6277.833) (-6290.675) (-6281.505) -- 0:01:07
942000 -- (-6284.500) (-6284.721) [-6278.497] (-6289.635) * [-6275.824] (-6284.243) (-6289.659) (-6290.968) -- 0:01:06
943000 -- [-6281.165] (-6286.732) (-6277.607) (-6282.569) * (-6291.121) [-6277.873] (-6289.416) (-6287.022) -- 0:01:05
944000 -- (-6284.534) [-6286.954] (-6291.278) (-6284.700) * (-6278.528) (-6283.100) [-6283.052] (-6279.373) -- 0:01:04
945000 -- (-6295.041) (-6282.689) (-6284.713) [-6283.391] * (-6289.185) [-6284.390] (-6285.646) (-6284.779) -- 0:01:02
Average standard deviation of split frequencies: 0.007275
946000 -- (-6279.718) (-6299.000) (-6278.074) [-6287.332] * (-6280.252) (-6291.174) (-6285.793) [-6275.301] -- 0:01:01
947000 -- (-6283.266) (-6280.488) [-6289.170] (-6287.823) * (-6295.195) (-6290.389) [-6282.347] (-6291.315) -- 0:01:00
948000 -- (-6280.479) (-6287.437) (-6287.256) [-6282.030] * (-6284.939) (-6289.799) [-6276.594] (-6285.270) -- 0:00:59
949000 -- (-6284.773) (-6281.587) [-6280.063] (-6292.066) * (-6299.069) (-6282.488) [-6280.928] (-6277.813) -- 0:00:58
950000 -- (-6283.733) [-6278.560] (-6286.971) (-6281.664) * (-6284.142) (-6291.754) (-6290.634) [-6278.505] -- 0:00:57
Average standard deviation of split frequencies: 0.006942
951000 -- [-6283.042] (-6285.153) (-6288.424) (-6287.295) * (-6287.993) (-6292.535) (-6283.255) [-6282.210] -- 0:00:56
952000 -- (-6286.130) (-6287.609) [-6282.495] (-6280.037) * (-6293.881) (-6288.496) [-6280.130] (-6283.056) -- 0:00:54
953000 -- (-6287.052) (-6287.250) [-6285.571] (-6294.485) * (-6278.697) (-6289.460) [-6283.946] (-6303.716) -- 0:00:53
954000 -- [-6279.162] (-6289.302) (-6279.666) (-6281.262) * (-6286.899) (-6288.363) [-6283.423] (-6283.956) -- 0:00:52
955000 -- [-6277.140] (-6278.290) (-6287.906) (-6282.423) * (-6281.208) (-6292.626) [-6277.825] (-6290.253) -- 0:00:51
Average standard deviation of split frequencies: 0.007347
956000 -- (-6279.771) (-6295.486) (-6284.687) [-6290.121] * (-6291.394) (-6297.438) (-6286.055) [-6278.952] -- 0:00:50
957000 -- [-6286.994] (-6283.466) (-6288.607) (-6290.102) * (-6284.746) (-6281.730) [-6287.781] (-6288.992) -- 0:00:49
958000 -- (-6275.221) [-6283.485] (-6287.345) (-6282.779) * (-6283.018) [-6285.541] (-6279.929) (-6300.435) -- 0:00:48
959000 -- [-6284.034] (-6287.654) (-6288.424) (-6284.639) * (-6278.581) (-6280.842) (-6283.880) [-6283.471] -- 0:00:46
960000 -- [-6278.380] (-6286.545) (-6280.710) (-6288.839) * (-6283.064) (-6284.625) (-6279.738) [-6281.696] -- 0:00:45
Average standard deviation of split frequencies: 0.007557
961000 -- (-6274.495) (-6279.319) [-6280.819] (-6285.184) * [-6277.335] (-6285.816) (-6278.814) (-6273.546) -- 0:00:44
962000 -- [-6272.875] (-6288.304) (-6286.359) (-6286.541) * [-6289.499] (-6289.328) (-6295.268) (-6281.076) -- 0:00:43
963000 -- [-6277.542] (-6278.376) (-6278.491) (-6285.654) * (-6275.635) (-6287.419) [-6279.218] (-6281.381) -- 0:00:42
964000 -- (-6287.071) [-6293.104] (-6278.267) (-6283.793) * (-6281.040) (-6299.582) (-6275.042) [-6281.300] -- 0:00:41
965000 -- (-6286.784) (-6293.585) (-6290.555) [-6286.740] * (-6298.642) (-6299.322) [-6276.259] (-6278.750) -- 0:00:40
Average standard deviation of split frequencies: 0.007515
966000 -- (-6283.820) (-6283.264) (-6287.189) [-6281.006] * (-6283.073) (-6279.504) (-6287.303) [-6282.833] -- 0:00:38
967000 -- (-6279.807) (-6295.699) (-6287.741) [-6283.611] * [-6281.758] (-6282.919) (-6283.070) (-6293.590) -- 0:00:37
968000 -- (-6285.786) (-6291.773) [-6280.472] (-6288.039) * [-6287.508] (-6279.080) (-6279.942) (-6281.190) -- 0:00:36
969000 -- (-6282.461) (-6292.522) (-6281.592) [-6292.557] * [-6281.964] (-6290.594) (-6278.141) (-6286.383) -- 0:00:35
970000 -- (-6285.446) (-6289.333) [-6287.783] (-6287.307) * (-6281.052) (-6285.617) [-6282.476] (-6280.611) -- 0:00:34
Average standard deviation of split frequencies: 0.007090
971000 -- [-6275.680] (-6289.896) (-6287.536) (-6285.934) * [-6291.887] (-6290.154) (-6282.525) (-6284.941) -- 0:00:33
972000 -- (-6284.961) (-6286.162) [-6282.681] (-6280.058) * (-6290.996) (-6289.954) (-6282.209) [-6278.736] -- 0:00:32
973000 -- (-6283.967) (-6285.802) [-6285.364] (-6281.465) * (-6294.073) [-6285.234] (-6285.209) (-6290.588) -- 0:00:30
974000 -- (-6296.930) (-6282.555) [-6278.155] (-6281.196) * (-6294.076) (-6284.133) (-6288.884) [-6283.356] -- 0:00:29
975000 -- (-6284.171) (-6287.188) [-6283.181] (-6285.062) * [-6289.191] (-6282.625) (-6288.771) (-6277.447) -- 0:00:28
Average standard deviation of split frequencies: 0.006714
976000 -- (-6273.456) (-6285.348) [-6284.156] (-6287.357) * (-6296.767) (-6284.339) (-6292.432) [-6286.114] -- 0:00:27
977000 -- (-6283.935) (-6290.331) [-6281.837] (-6282.488) * (-6287.401) (-6280.364) [-6282.428] (-6284.431) -- 0:00:26
978000 -- (-6281.383) [-6286.426] (-6286.475) (-6283.411) * (-6283.352) (-6281.497) (-6285.306) [-6279.600] -- 0:00:25
979000 -- [-6285.307] (-6286.031) (-6279.197) (-6297.376) * (-6286.650) [-6285.602] (-6281.544) (-6283.343) -- 0:00:24
980000 -- (-6292.159) (-6285.079) [-6285.664] (-6282.157) * [-6279.468] (-6281.758) (-6290.102) (-6299.264) -- 0:00:22
Average standard deviation of split frequencies: 0.006586
981000 -- (-6277.464) (-6291.624) [-6281.816] (-6301.253) * (-6295.229) (-6287.216) [-6279.148] (-6289.629) -- 0:00:21
982000 -- (-6284.799) (-6289.650) [-6277.397] (-6284.862) * [-6287.199] (-6286.151) (-6292.414) (-6289.558) -- 0:00:20
983000 -- (-6283.046) (-6292.540) (-6285.327) [-6281.741] * (-6287.959) (-6281.214) [-6281.576] (-6281.096) -- 0:00:19
984000 -- (-6278.668) [-6282.083] (-6282.600) (-6280.545) * (-6284.631) [-6287.560] (-6286.013) (-6282.001) -- 0:00:18
985000 -- (-6284.233) (-6282.429) [-6277.968] (-6285.758) * [-6280.022] (-6281.277) (-6286.521) (-6278.747) -- 0:00:17
Average standard deviation of split frequencies: 0.005881
986000 -- (-6287.315) [-6288.988] (-6280.632) (-6280.719) * (-6288.555) (-6282.395) (-6279.618) [-6276.125] -- 0:00:16
987000 -- [-6275.202] (-6286.169) (-6286.087) (-6279.808) * (-6289.959) (-6285.776) (-6276.668) [-6274.621] -- 0:00:14
988000 -- (-6287.500) (-6306.379) (-6279.943) [-6289.346] * [-6279.933] (-6282.265) (-6284.417) (-6282.491) -- 0:00:13
989000 -- [-6284.436] (-6293.681) (-6280.551) (-6286.555) * (-6283.220) [-6278.506] (-6283.114) (-6281.215) -- 0:00:12
990000 -- [-6281.160] (-6295.304) (-6282.574) (-6283.821) * (-6286.864) (-6287.069) [-6280.044] (-6289.225) -- 0:00:11
Average standard deviation of split frequencies: 0.006329
991000 -- (-6282.155) (-6292.947) [-6277.643] (-6286.811) * [-6276.577] (-6286.153) (-6279.859) (-6284.332) -- 0:00:10
992000 -- (-6277.914) (-6282.874) [-6279.318] (-6291.865) * (-6279.817) [-6280.821] (-6288.723) (-6291.933) -- 0:00:09
993000 -- (-6286.558) [-6282.682] (-6289.632) (-6292.485) * (-6289.434) (-6297.081) [-6276.686] (-6283.699) -- 0:00:08
994000 -- (-6280.361) (-6291.885) (-6286.291) [-6281.331] * (-6280.592) [-6283.235] (-6281.925) (-6287.690) -- 0:00:06
995000 -- (-6282.426) [-6277.910] (-6277.403) (-6277.143) * (-6292.466) (-6281.718) [-6279.230] (-6287.099) -- 0:00:05
Average standard deviation of split frequencies: 0.005964
996000 -- (-6287.711) (-6278.527) [-6272.355] (-6288.132) * [-6281.869] (-6285.145) (-6280.316) (-6288.425) -- 0:00:04
997000 -- (-6280.483) [-6279.133] (-6283.035) (-6290.509) * (-6275.379) [-6279.521] (-6288.190) (-6282.205) -- 0:00:03
998000 -- (-6285.674) (-6285.483) [-6282.376] (-6289.950) * (-6280.360) (-6297.811) (-6289.278) [-6291.732] -- 0:00:02
999000 -- (-6286.591) [-6281.122] (-6291.960) (-6283.812) * (-6284.942) (-6305.998) [-6278.019] (-6300.010) -- 0:00:01
1000000 -- (-6285.523) (-6279.355) (-6280.286) [-6289.403] * [-6288.087] (-6286.042) (-6285.638) (-6282.373) -- 0:00:00
Average standard deviation of split frequencies: 0.006077
Analysis completed in 19 mins 3 seconds
Analysis used 1142.33 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -6270.04
Likelihood of best state for "cold" chain of run 2 was -6270.03
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
29.0 % ( 16 %) Dirichlet(Revmat{all})
47.2 % ( 33 %) Slider(Revmat{all})
17.6 % ( 23 %) Dirichlet(Pi{all})
24.6 % ( 20 %) Slider(Pi{all})
25.8 % ( 26 %) Multiplier(Alpha{1,2})
42.8 % ( 34 %) Multiplier(Alpha{3})
38.7 % ( 35 %) Slider(Pinvar{all})
10.2 % ( 8 %) ExtSPR(Tau{all},V{all})
2.9 % ( 2 %) ExtTBR(Tau{all},V{all})
11.5 % ( 10 %) NNI(Tau{all},V{all})
17.9 % ( 23 %) ParsSPR(Tau{all},V{all})
26.3 % ( 19 %) Multiplier(V{all})
24.0 % ( 25 %) Nodeslider(V{all})
24.6 % ( 28 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
28.9 % ( 20 %) Dirichlet(Revmat{all})
46.6 % ( 30 %) Slider(Revmat{all})
18.0 % ( 28 %) Dirichlet(Pi{all})
24.8 % ( 27 %) Slider(Pi{all})
25.9 % ( 25 %) Multiplier(Alpha{1,2})
43.5 % ( 23 %) Multiplier(Alpha{3})
39.2 % ( 24 %) Slider(Pinvar{all})
10.1 % ( 14 %) ExtSPR(Tau{all},V{all})
2.9 % ( 2 %) ExtTBR(Tau{all},V{all})
11.5 % ( 12 %) NNI(Tau{all},V{all})
17.8 % ( 17 %) ParsSPR(Tau{all},V{all})
26.2 % ( 29 %) Multiplier(V{all})
24.3 % ( 21 %) Nodeslider(V{all})
24.4 % ( 27 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.78 0.58 0.43
2 | 166085 0.79 0.61
3 | 166549 166355 0.81
4 | 167447 167042 166522
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.78 0.59 0.43
2 | 166236 0.79 0.61
3 | 166587 166377 0.81
4 | 167079 166851 166870
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -6279.35
| 2 |
| 1 2 1 |
| 1 1 |
|2 2 2 1 2 2 * |
| 11 1 1 11 1 2 1 2 2 2 1 1 *|
| 2122 2 2 22 2 22 1 2 1 12 1 2 1 |
|1 22 2 * 1 2 1 2 1 21*1 12 1 21 2 2 |
| *1 2 2 2 11 1 2 * 2 |
| 1 2 1 1 1 1 2 1 2 1 2 122 |
| 1 2 2 1 2 1 11 |
| 1 1 21 2 12 2 |
| 1 1 |
| 2 |
| 1 |
| 2 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -6284.88
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -6276.35 -6296.38
2 -6276.34 -6293.30
--------------------------------------
TOTAL -6276.35 -6295.73
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 2.089780 0.020731 1.818225 2.367343 2.081064 1340.58 1397.75 1.000
r(A<->C){all} 0.109987 0.000278 0.078242 0.142996 0.109670 1061.54 1077.18 1.001
r(A<->G){all} 0.261211 0.000563 0.215310 0.307031 0.260457 553.14 640.48 1.000
r(A<->T){all} 0.127603 0.000272 0.096125 0.160983 0.127066 974.31 1029.25 1.000
r(C<->G){all} 0.030848 0.000099 0.011941 0.049527 0.030379 787.44 802.93 1.000
r(C<->T){all} 0.407937 0.000818 0.352708 0.465509 0.407018 654.65 756.02 1.000
r(G<->T){all} 0.062415 0.000142 0.039242 0.085816 0.061586 1109.19 1170.41 1.000
pi(A){all} 0.280376 0.000095 0.261933 0.299204 0.280218 871.60 923.05 1.000
pi(C){all} 0.219858 0.000088 0.201613 0.237612 0.219788 899.59 935.53 1.000
pi(G){all} 0.259661 0.000101 0.239477 0.278902 0.259617 878.38 962.41 1.000
pi(T){all} 0.240105 0.000082 0.221939 0.257565 0.239993 1023.54 1137.57 1.000
alpha{1,2} 0.174700 0.000222 0.146737 0.204389 0.173718 1265.72 1343.29 1.000
alpha{3} 4.160105 1.660198 2.145937 6.819313 3.950485 1406.72 1453.86 1.000
pinvar{all} 0.167023 0.001074 0.101724 0.230538 0.167677 1269.25 1346.79 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C2
4 -- C3
5 -- C4
6 -- C5
7 -- C6
8 -- C7
9 -- C8
10 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
----------------
1 -- .*********
2 -- .*........
3 -- ..*.......
4 -- ...*......
5 -- ....*.....
6 -- .....*....
7 -- ......*...
8 -- .......*..
9 -- ........*.
10 -- .........*
11 -- ....*.*..*
12 -- .**.....*.
13 -- .****.****
14 -- .***...**.
15 -- ..*.....*.
16 -- ...*...*..
17 -- ....*....*
18 -- ....*.*...
19 -- .**....**.
20 -- ......*..*
----------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
11 3002 1.000000 0.000000 1.000000 1.000000 2
12 3002 1.000000 0.000000 1.000000 1.000000 2
13 3002 1.000000 0.000000 1.000000 1.000000 2
14 3001 0.999667 0.000471 0.999334 1.000000 2
15 2820 0.939374 0.017901 0.926716 0.952032 2
16 2142 0.713524 0.017901 0.700866 0.726183 2
17 1630 0.542971 0.000942 0.542305 0.543638 2
18 963 0.320786 0.003298 0.318454 0.323118 2
19 802 0.267155 0.017901 0.254497 0.279813 2
20 409 0.136243 0.002355 0.134577 0.137908 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.000984 0.000001 0.000000 0.002937 0.000673 1.001 2
length{all}[2] 0.076060 0.000434 0.042541 0.128844 0.072731 1.001 2
length{all}[3] 0.005627 0.000022 0.000000 0.014482 0.004632 1.000 2
length{all}[4] 0.262085 0.001315 0.197199 0.337222 0.259671 1.000 2
length{all}[5] 0.000992 0.000001 0.000001 0.002878 0.000685 1.000 2
length{all}[6] 0.001020 0.000001 0.000000 0.003074 0.000701 1.001 2
length{all}[7] 0.003158 0.000004 0.000002 0.007130 0.002828 1.000 2
length{all}[8] 0.269661 0.001388 0.198749 0.343406 0.266256 1.000 2
length{all}[9] 0.262917 0.001086 0.193319 0.327499 0.264389 1.001 2
length{all}[10] 0.003693 0.000004 0.000266 0.007669 0.003376 1.000 2
length{all}[11] 0.219774 0.001609 0.146937 0.303190 0.216804 1.000 2
length{all}[12] 0.165966 0.000874 0.110710 0.224029 0.163538 1.000 2
length{all}[13] 0.575694 0.004825 0.447994 0.711218 0.568883 1.000 2
length{all}[14] 0.115224 0.001106 0.051603 0.180663 0.113440 1.000 2
length{all}[15] 0.068913 0.000223 0.038676 0.098324 0.067771 1.000 2
length{all}[16] 0.057511 0.000493 0.015930 0.103168 0.056578 1.000 2
length{all}[17] 0.002425 0.000004 0.000000 0.005909 0.002035 1.001 2
length{all}[18] 0.001837 0.000003 0.000002 0.004898 0.001407 0.999 2
length{all}[19] 0.050694 0.000482 0.009581 0.094694 0.048315 1.002 2
length{all}[20] 0.000975 0.000001 0.000000 0.002957 0.000686 0.999 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.006077
Maximum standard deviation of split frequencies = 0.017901
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.002
Clade credibility values:
/----------------------------------------------------------------------- C1 (1)
|
|----------------------------------------------------------------------- C5 (6)
|
| /---------------------------- C10 (2)
| |
| /------100-----+ /-------------- C2 (3)
+ | \------94-----+
| | \-------------- C8 (9)
| /-----100-----+
| | | /-------------- C3 (4)
| | \-------------71-------------+
| | \-------------- C7 (8)
\-----100-----+
| /-------------- C4 (5)
| /------54-----+
| | \-------------- C9 (10)
\-------------100------------+
\---------------------------- C6 (7)
Phylogram (based on average branch lengths):
/ C1 (1)
|
| C5 (6)
|
| /---- C10 (2)
| |
| /---------+ / C2 (3)
+ | \---+
| | \---------------- C8 (9)
| /------+
| | | /---------------- C3 (4)
| | \--+
| | \---------------- C7 (8)
\----------------------------------+
| / C4 (5)
| |
| | C9 (10)
\------------+
\ C6 (7)
|-----------| 0.200 expected changes per site
Calculating tree probabilities...
Credible sets of trees (17 trees sampled):
50 % credible set contains 2 trees
90 % credible set contains 6 trees
95 % credible set contains 8 trees
99 % credible set contains 12 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Wed Oct 26 00:49:05 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.06 sec, SCORE=1000, Nseq=10, Len=470
C1 MSGRNRSRSGTPSPKVTFKQESDGSDSESERRNGNRNGARPKNNNSRGSA
C2 MSGRNKPRPGNQSPKVTFKQESDGSDSESERRNGNRNGARPKNNNNRGFG
C3 MSGRNKPRPGSQSPKVTFKQESDGSDSESERRNGNRSGARPKNNNNRGGN
C4 MSGRNKPRPTSQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGA
C5 MSGRNRSRSGTPSPKVTFKQESDGSDSESERRNGNRNGARPKNNNSRGSA
C6 MSGRNKPRPTSQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGA
C7 MSGRNKPRPSNQ-AKVTFKQESDNSDSESERRNGNRSGARPKNNNNRGAN
C8 MSGRNKPRPGSQSPKVTFKQESDGSDSESERRNGNRNGARPKNNNGRGAG
C9 MSGRNKPRLIFQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGA
C10 MSGRNKPRPSNQ-PKVTFKQESDGSDSESERRNGNRNGARPKTNNNRGAG
*****:.* .*********.************.***.*.**.**
C1 PKPEKPKAAPPQNVSWFAPLVQTGKAELRFPRGEGVPVSQGVDSTYEHGY
C2 SKPEKPKAAPPQNVSWYAPLVQTGKADLRFPRGEGVPISQGVDPIYQHGY
C3 SKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGEGVPISQGVDPVYLHGY
C4 PKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGY
C5 PKPEKPKAAPPQNVSWFAPLVQTGKAELRFPRGEGVPVSQGVDSTYEHGY
C6 PKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGY
C7 PKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGEGVPISQGVDLNYLHGY
C8 SKPEKPKAAPPQNVSWYAPLVQTGKNDLRFPRGQGVPISQGIDDIYNHGY
C9 PKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGY
C10 SKPEKPKAAPPQNVSWYAPLVQTGKADLRFPRGEGVPISQGVDPIYQHGY
.***************:******** :******:***:***:* * ***
C1 WLRTQRSFQKGGKQVLANPRWYFYYTGTGRFGDLRFGTKNPDIVWVGQEG
C2 WTRTQRSFQKGGKTVQANPRWYFYYTGTGRYADLRWGQKNPDIVWVGEEG
C3 WVRTQRNFQKGGKTVQANPRWYFYYTGTGRHADLRWGQKNPDLIWVGEDG
C4 WVRTQRTFQKGGKPVSANPRWYFYYTGTGRYGDMRYGTKNPDIYWVGEEG
C5 WLRTQRSFQKGGKQVLANPRWYFYYTGTGRFGDLRFGTKNPDIVWVGQEG
C6 WVRTQRTFQKGGKPVSANPRWYFYYTGTGRYGDMRYGTKNPDIYWVGEEG
C7 WVRTQRSYQKGGKTVQANARWYFYYTGTGRFGDLRWGQKNPEIIWVGEEG
C8 WVRTQRNFQKGGKQVAANPRWYFYYTGTGRYADLRYGSKNPDIIWVGAEG
C9 WVRTQRTFQKGGKPVSANPRWYFYYTGTGRYGDMRYGTKNPDIYWVGEEG
C10 WTRTQRSFQKGGKTVQANPRWYFYYTGTGRYADLRWGQKNPDIVWVGEEG
* ****.:***** * **.***********..*:*:* ***:: *** :*
C1 ANINRLGDMGTRNPSNDGAIPVQLAGGIPKGFYAEGRGSRGNSRSSSRNS
C2 ANINRVGDMGTRNPNNDAAIAVQLGNGIPKGFYAEGRGSRGNSRNSSRNS
C3 ANINRIGDMGTRNPNNDSAIPVQFGSGIPKGFYAEGRNSRGNSRNSSRNS
C4 ANVNRVGDMGTRNPNNDAAISVQLADGIPKGFYAEGRNSRGNSRNSSRNS
C5 ANINRLGDMGTRNPSNDGAIPVQLAGGIPKGFYAEGRGSRGNSRSSSRNS
C6 ANVNRVGDMGTRNPNNDAAISVQLADGIPKGFYAEGRNSRGNSRNSSRNS
C7 ANVNRVGDMGTRNPNNDAAIPVQLSGGIPKGFYAEGRNSRGNSRNGSRNS
C8 ANINRVGDIGTRNPSNDAAIPVQLADGIPKGFYAEGRNSRGNSRNNSRSS
C9 ANVNRVGDMGTRNPNNDAAISVQLADGIPKGFYAEGRNSRGNSRNSSRNS
C10 ANINRVGDMGTRNPNNDAAIAVQLGNGIPKGFYAEGRGSRGNSRNSSRNS
**:**:**:*****.**.**.**:..***********.******..**.*
C1 SRASSRGNSRASSRGASPGR--PAANPSTEPWMAYLVQKLERLESQVSGT
C2 SRASSRSSSRPNSRGASPGRNTPNPGAGSEPWMAYLVSKLENLEAKVNGT
C3 SRASTRGNSRANSRGASPGRNTPSGGSNSEPWMAYLVQKLEALETKVNGN
C4 SRASSRGGSRPGSRGASPGRATPS-GSGAEPWMAYLVSKLETLEAKVNGT
C5 SRASSRGNSRASSRGASPGR--PAANPSTEPWMAYLVQKLERLESQVSGT
C6 SRASSRGGSRPGSRGASPGRATPS-GSGVEPWMAYLVSKLETLEAKVNGT
C7 SRASSRGSSRASSRGASPGRNTPSGGSNSEPWMAYLVQKLEALETKVNGN
C8 SRASSRGSSRASSRGPSPGRATPS-GGNSEPWMAYLVQKLEALETKVNGN
C9 SRASSRGGSRPGSRGASPGRATPS-GSGAEPWMAYLVSKLETLEAKVNGT
C10 SRASSRSSSRPNSRGASPGRNTPNPGSGSEPWMAYLVSKLENLEAKVNGT
****:*..**..***.**** * . . ********.*** **::*.*.
C1 KPATKNPVQVTKNEAAANAKKLRHKRTAHKGSGVTVNYGRRGPGDLEGNF
C2 KPETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNF
C3 KSETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTANFGRRGPGELEGNF
C4 KSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNF
C5 KPATKNPVQVTKNEAAANAKKLRHKRTAHKGSGVTVNYGRRGPGDLEGNF
C6 KSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNF
C7 KSETKTPVQVSKNAAAENAKRLRHKRTPHKGSGVTVNYGRRGPGDWEGNL
C8 KPATKAPVQVSKNAASENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNF
C9 KSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNF
C10 KPETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNF
*. ** ****:*. *: ***:******.******* *:******: ***:
C1 GDREMIKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTRDEDDALWLHYKGA
C2 GDQTMLKLGTDDPRFPAAAQMAPNTAAFLFMSHFSTREEGDALWLNYKGA
C3 GDLEMLKLGADDPRFPAVAQMAPNVAAFMFMSHFSTRDEEDALWLNYRGA
C4 GDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGA
C5 GDREMIKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTRDEDDALWLHYKGA
C6 GDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGA
C7 GDQTILKLGTDDPRFPVAAQMAPNVASFLFMSHFSTRDEDEALWLQYKGA
C8 GDQTMLKLGTDDPRFPAAAQMAPNTAAFLFMSHFSTREEGDALWLNYKGA
C9 GDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGA
C10 GDQTMLKLGTDDPRFPAAAQMAPNVAAFLFMSHFSTREEGDALWLNYKGA
** ::***.*****...******.::*:****:***:* :****:*:**
C1 IKLPKDDPNYEQWTKILAENLNAYKDFPPTEPKKDKKKKEETAQDTVIFE
C2 IKLPKDDPNYNQWVKILEENLNAYKSFPPPEPKKDKKKKEETSSETVVFE
C3 IKLPKSDPNFEQWTKLLEENLNAYKTFPPPAPKKDKKKKEEASQEIAIFE
C4 IKLPKDDPNYEQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFE
C5 IKLPKDDPNYEQWTKILAENLNAYKDFPPTEPKKDKKKKEETAQDTVIFE
C6 IKLPKDDPNYEQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFE
C7 IKLPKADPNYEQWVKFLDENLNAYKNFPPPEPKKDKKKKEEVSQEIIVHE
C8 IKLPKDDPNYNQWVKILEENLNAYKSFPPPEPKKEKKKKEETSSETVVFE
C9 IKLPKDDPNYEQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFE
C10 IKLPKDDPNYNQWVKVLEENLNAYKDFPPPEPKKDKKKKEEVSAETVVFE
***** ***::**.*.* ******* ***. ***:****** : : :.*
C1 DASTGTDQTVVKVWVKDQDAQTDDEWLGGDETVYEDEDDRPKTQRRHKKR
C2 DASTGTDQPVVKVWVKDEGMQTDDEWLGGDDTVYEEEEDKPKVQRRHKKR
C3 DASTGTDQQIVKVWVKDEGAQTDEEWLGGDDTVYEEEDDRPKTQRRHKKR
C4 DASTGTDQAVVKVWVKDEGAQTDDEWLGGDDTVYEEEDDRPKTQRRHKKR
C5 DASTGTDQTVVKVWVKDQDAQTDDEWLGGDETVYEDEDDRPKTQRRHKKR
C6 DASTGTDQAVVKVWVKDEGAQTDDEWLGGDDTVYEEEDDRPKTQRRHKKR
C7 DASTGTDQPIVKVWVKDEGAQTDDEWLGGDDTVYEEEEDKPKVQRRHKKR
C8 DASTGTDQPVVKVWVKDEGMQTDDEWLGGDDTVYEEEEDKPKVQRRHKKR
C9 DASTGTDQAVVKVWVKDEGAQTDDEWLGGDDTVYEEEDDRPKTQRRHKKR
C10 DASTGTDQPVVKVWVKDEGMQTDDEWLGGDDTVYEDEEDKPKTQRRHKKR
******** :*******:. ***:******:****:*:*:**.*******
C1 GSTASRVTIADPTNAGAERS
C2 GSTASRVTVADPTNLAAERS
C3 NSTASRVTIADPMNATSERS
C4 NSTASRVTIADPMNATSERS
C5 GSTASRVTIADPTNAGAERS
C6 NSTASRVTIADPMNATSERS
C7 GSTASRVTVADPTNVAAERS
C8 GSTASRVTVADPTNLAAERS
C9 NSTASRVTIADPMNATSERS
C10 HSTASRVTIADPTNVNSERS
*******:*** * :***
-- Starting log on Wed Oct 26 02:09:26 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result/original_alignment/codeml,BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C1 1410 sites
reading seq# 2 C2 1410 sites
reading seq# 3 C3 1410 sites
reading seq# 4 C4 1410 sites
reading seq# 5 C5 1410 sites
reading seq# 6 C6 1410 sites
reading seq# 7 C7 1410 sites
reading seq# 8 C8 1410 sites
reading seq# 9 C9 1410 sites
reading seq#10 C10 1410 sitesns = 10 ls = 1410
Reading sequences, sequential format..
Reading seq # 1: C1
Reading seq # 2: C2
Reading seq # 3: C3
Reading seq # 4: C4
Reading seq # 5: C5
Reading seq # 6: C6
Reading seq # 7: C7
Reading seq # 8: C8
Reading seq # 9: C9
Reading seq #10: C10
Sites with gaps or missing data are removed.
6 ambiguity characters in seq. 1
6 ambiguity characters in seq. 4
6 ambiguity characters in seq. 5
6 ambiguity characters in seq. 6
3 ambiguity characters in seq. 7
3 ambiguity characters in seq. 8
6 ambiguity characters in seq. 9
3 ambiguity characters in seq. 10
4 sites are removed. 13 221 222 225
Sequences read..
Counting site patterns.. 0:00
Compressing, 401 patterns at 466 / 466 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 401 patterns at 466 / 466 sites (100.0%), 0:00
Counting codons..
360 bytes for distance
391376 bytes for conP
35288 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(1, 5, (((10, (2, 8)), (3, 7)), ((4, 9), 6))); MP score: 905
1565504 bytes for conP, adjusted
0.077062 0.106549 0.049919 0.105038 0.082881 0.031348 0.082093 0.019700 0.106554 0.069037 0.017221 0.036931 0.012116 0.039375 0.100331 0.013889 0.015817 0.300000 0.892053 0.488617
ntime & nrate & np: 17 2 20
Bounds (np=20):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 12.718241
np = 20
lnL0 = -8127.644339
Iterating by ming2
Initial: fx= 8127.644339
x= 0.07706 0.10655 0.04992 0.10504 0.08288 0.03135 0.08209 0.01970 0.10655 0.06904 0.01722 0.03693 0.01212 0.03937 0.10033 0.01389 0.01582 0.30000 0.89205 0.48862
1 h-m-p 0.0000 0.0001 11479.3612 ++ 6869.941328 m 0.0001 25 | 0/20
2 h-m-p 0.0000 0.0000 80513.2232 ++ 6830.777986 m 0.0000 48 | 0/20
3 h-m-p 0.0000 0.0001 1966.9230 ++ 6671.505729 m 0.0001 71 | 1/20
4 h-m-p 0.0000 0.0000 6577.5806 ++ 6505.260589 m 0.0000 94 | 2/20
5 h-m-p 0.0000 0.0000 398665221.7492 ++ 6401.899288 m 0.0000 117 | 3/20
6 h-m-p 0.0000 0.0000 7590.4620 ++ 6364.132134 m 0.0000 140 | 4/20
7 h-m-p 0.0000 0.0009 747.6290 ++CYYYCCC 6077.146352 6 0.0007 174 | 4/20
8 h-m-p 0.0000 0.0002 527.0993 +YCYCCC 6039.532538 5 0.0001 206 | 4/20
9 h-m-p 0.0001 0.0003 217.1987 +YCYCCC 6034.510392 5 0.0002 238 | 4/20
10 h-m-p 0.0003 0.0043 141.1174 YCCC 6030.626462 3 0.0005 266 | 4/20
11 h-m-p 0.0003 0.0019 277.3476 CCC 6027.404720 2 0.0002 293 | 4/20
12 h-m-p 0.0002 0.0009 255.6085 CCCC 6023.936725 3 0.0003 322 | 4/20
13 h-m-p 0.0008 0.0049 93.1428 YCCC 6022.088487 3 0.0005 350 | 4/20
14 h-m-p 0.0014 0.0083 35.3570 CCCC 6019.004276 3 0.0018 379 | 4/20
15 h-m-p 0.0010 0.0065 66.7912 CCCC 6011.599605 3 0.0017 408 | 4/20
16 h-m-p 0.0019 0.0094 47.3475 YCCC 5986.546493 3 0.0043 436 | 4/20
17 h-m-p 0.0005 0.0023 171.7988 +YYCCC 5963.024748 4 0.0015 466 | 3/20
18 h-m-p 0.0000 0.0001 1260.5977 CYYC 5962.735156 3 0.0000 494 | 3/20
19 h-m-p 0.0002 0.0150 20.9026 +YC 5962.290249 1 0.0017 519 | 3/20
20 h-m-p 0.1272 0.6359 0.2366 ++ 5921.824345 m 0.6359 542 | 3/20
21 h-m-p 0.0363 0.1816 0.5971 ++ 5899.235664 m 0.1816 582 | 4/20
22 h-m-p 0.1090 0.5450 0.1866 +YYYYCYCCC 5887.661901 8 0.4535 634 | 4/20
23 h-m-p 0.1731 0.8653 0.2746 ++ 5866.555824 m 0.8653 673 | 3/20
24 h-m-p 0.0000 0.0000 473.2436
h-m-p: 5.06382633e-21 2.53191316e-20 4.73243606e+02 5866.555824
.. | 3/20
25 h-m-p 0.0000 0.0001 432.9422 CYCC 5865.381693 3 0.0000 737 | 3/20
26 h-m-p 0.0000 0.0000 201.3345 CYCCC 5865.162160 4 0.0000 767 | 3/20
27 h-m-p 0.0000 0.0001 144.0910 +YCCC 5864.833569 3 0.0000 796 | 3/20
28 h-m-p 0.0000 0.0008 204.7518 ++YCCC 5862.216433 3 0.0004 826 | 3/20
29 h-m-p 0.0000 0.0002 254.5762 YCYCCC 5861.098833 5 0.0001 857 | 3/20
30 h-m-p 0.0000 0.0000 2512.6187 ++ 5858.615125 m 0.0000 880 | 3/20
31 h-m-p 0.0003 0.0036 243.0951 CYC 5856.278054 2 0.0003 906 | 3/20
32 h-m-p 0.0000 0.0001 126.2669 ++ 5855.801848 m 0.0001 929 | 4/20
33 h-m-p 0.0003 0.0568 43.5821 ++CCC 5853.547543 2 0.0039 958 | 4/20
34 h-m-p 0.0024 0.0118 37.2297 CYC 5852.732643 2 0.0022 984 | 4/20
35 h-m-p 0.0056 0.0492 14.6368 YC 5852.508969 1 0.0029 1008 | 3/20
36 h-m-p 0.0017 0.0406 24.8921 -CY 5852.493413 1 0.0001 1034 | 3/20
37 h-m-p 0.0003 0.0031 10.2927 +YC 5852.441382 1 0.0017 1059 | 3/20
38 h-m-p 0.0048 0.1185 3.6359 YC 5852.417603 1 0.0037 1083 | 3/20
39 h-m-p 0.0051 0.0666 2.6619 YC 5852.381795 1 0.0093 1107 | 3/20
40 h-m-p 0.0075 0.1282 3.2882 YC 5852.353756 1 0.0054 1131 | 3/20
41 h-m-p 0.0153 0.4627 1.1509 C 5852.294622 0 0.0149 1154 | 3/20
42 h-m-p 0.0082 0.0478 2.0902 ++ 5851.352824 m 0.0478 1177 | 3/20
43 h-m-p 0.0000 0.0000 7.0030
h-m-p: 2.47778097e-19 1.23889049e-18 7.00297333e+00 5851.352824
.. | 3/20
44 h-m-p 0.0000 0.0006 13.9237 +YC 5851.349820 1 0.0000 1222 | 3/20
45 h-m-p 0.0000 0.0062 42.1853 +CC 5851.335764 1 0.0001 1248 | 3/20
46 h-m-p 0.0000 0.0006 101.0561 CC 5851.316874 1 0.0000 1273 | 3/20
47 h-m-p 0.0001 0.0007 20.6647 YC 5851.308156 1 0.0001 1297 | 3/20
48 h-m-p 0.0001 0.0012 37.4832 C 5851.300822 0 0.0001 1320 | 3/20
49 h-m-p 0.0000 0.0009 71.1371 +CC 5851.266329 1 0.0001 1346 | 3/20
50 h-m-p 0.0000 0.0002 20.3890 ++ 5851.253045 m 0.0002 1369 | 3/20
51 h-m-p 0.0002 0.0325 20.5797 YC 5851.233311 1 0.0004 1393 | 3/20
52 h-m-p 0.0048 0.0240 1.4644 YC 5851.230000 1 0.0033 1417 | 3/20
53 h-m-p 0.0024 0.0122 2.0421 YC 5851.225146 1 0.0049 1441 | 3/20
54 h-m-p 0.0049 0.3454 2.0134 YC 5851.222676 1 0.0032 1465 | 3/20
55 h-m-p 0.0155 1.6449 0.4142 Y 5851.222494 0 0.0026 1488 | 3/20
56 h-m-p 0.0064 0.0489 0.1680 Y 5851.222452 0 0.0036 1528 | 3/20
57 h-m-p 0.0121 6.0670 0.2309 C 5851.222400 0 0.0043 1568 | 3/20
58 h-m-p 0.0126 6.3027 0.0914 C 5851.222388 0 0.0044 1608 | 3/20
59 h-m-p 0.0094 0.8031 0.0427 Y 5851.222384 0 0.0044 1648 | 3/20
60 h-m-p 0.0722 5.4052 0.0026 C 5851.222381 0 0.0624 1688 | 3/20
61 h-m-p 0.0179 0.6190 0.0090 +Y 5851.222331 0 0.0521 1729 | 3/20
62 h-m-p 1.6000 8.0000 0.0000 Y 5851.222331 0 0.9394 1769 | 3/20
63 h-m-p 1.6000 8.0000 0.0000 C 5851.222331 0 0.4000 1809 | 3/20
64 h-m-p 0.6578 8.0000 0.0000 -C 5851.222331 0 0.0411 1850
Out..
lnL = -5851.222331
1851 lfun, 5553 eigenQcodon, 62934 P(t)
end of tree file.
Time used: 0:50
Model 2: PositiveSelection
TREE # 1
(1, 5, (((10, (2, 8)), (3, 7)), ((4, 9), 6))); MP score: 905
0.093405 0.086726 0.021303 0.024862 0.021748 0.018719 0.050383 0.101135 0.096765 0.103547 0.030475 0.098648 0.069829 0.109662 0.056344 0.027258 0.100026 1.803649 1.164919 0.399172 0.112047 1.362509
ntime & nrate & np: 17 3 22
Bounds (np=22):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 7.046224
np = 22
lnL0 = -7615.102082
Iterating by ming2
Initial: fx= 7615.102082
x= 0.09340 0.08673 0.02130 0.02486 0.02175 0.01872 0.05038 0.10113 0.09677 0.10355 0.03048 0.09865 0.06983 0.10966 0.05634 0.02726 0.10003 1.80365 1.16492 0.39917 0.11205 1.36251
1 h-m-p 0.0000 0.0001 10006.7798 ++ 6283.065765 m 0.0001 27 | 0/22
2 h-m-p 0.0000 0.0001 4403.8397 +YYYCCC 6234.783295 5 0.0001 60 | 0/22
3 h-m-p 0.0000 0.0000 974.9308 ++ 6217.233909 m 0.0000 85 | 1/22
4 h-m-p 0.0000 0.0000 10689.6789 ++ 6147.670488 m 0.0000 110 | 2/22
5 h-m-p 0.0000 0.0000 956.2036 ++ 6143.805339 m 0.0000 135 | 3/22
6 h-m-p 0.0000 0.0001 829.1518 ++ 6124.713262 m 0.0001 160 | 4/22
7 h-m-p 0.0001 0.0003 435.1562 +YCYYYCYCCC 6098.240642 9 0.0003 199 | 3/22
8 h-m-p 0.0000 0.0000 12416.0166 +YCYC 6097.393765 3 0.0000 229 | 3/22
9 h-m-p 0.0000 0.0010 688.7282 ++++ 6056.928476 m 0.0010 256 | 4/22
10 h-m-p 0.0013 0.0066 154.6160 CCCC 6047.410262 3 0.0013 287 | 4/22
11 h-m-p 0.0011 0.0053 81.7747 YCCCC 6042.058938 4 0.0020 319 | 4/22
12 h-m-p 0.0038 0.0192 28.8166 CYC 6039.718460 2 0.0035 347 | 4/22
13 h-m-p 0.0027 0.0470 37.7535 +YCCC 6031.141251 3 0.0077 378 | 4/22
14 h-m-p 0.0019 0.0095 91.6103 CYCCC 6020.220797 4 0.0035 410 | 4/22
15 h-m-p 0.0020 0.0102 36.9851 YCCCC 6013.378192 4 0.0039 442 | 4/22
16 h-m-p 0.0019 0.0093 55.5064 YCCCCC 6000.475913 5 0.0040 476 | 4/22
17 h-m-p 0.0004 0.0019 118.8057 +YYCCC 5990.529600 4 0.0013 508 | 4/22
18 h-m-p 0.0005 0.0027 114.7079 CYCCC 5985.250281 4 0.0009 540 | 4/22
19 h-m-p 0.0015 0.0077 14.0121 ++ 5969.749834 m 0.0077 565 | 4/22
20 h-m-p 0.0000 0.0000 79.3733
h-m-p: 4.93175001e-20 2.46587501e-19 7.93733113e+01 5969.749834
.. | 4/22
21 h-m-p 0.0000 0.0000 1311.7134 ++ 5948.057353 m 0.0000 612 | 4/22
22 h-m-p 0.0000 0.0000 4427.2714 CCCCC 5940.163444 4 0.0000 645 | 4/22
23 h-m-p 0.0000 0.0001 904.8747 ++ 5910.022225 m 0.0001 670 | 4/22
24 h-m-p 0.0000 0.0000 1115.3780 +YYYCCC 5905.111845 5 0.0000 703 | 4/22
25 h-m-p 0.0000 0.0002 820.3781 ++ 5879.050764 m 0.0002 728 | 4/22
26 h-m-p 0.0000 0.0001 354.5376 ++ 5877.264818 m 0.0001 753 | 5/22
27 h-m-p 0.0003 0.0042 59.6477 +YCCC 5875.570339 3 0.0010 784 | 5/22
28 h-m-p 0.0006 0.0031 89.3144 CCCC 5873.993431 3 0.0008 815 | 5/22
29 h-m-p 0.0017 0.0211 44.8050 YCCC 5872.483360 3 0.0025 845 | 5/22
30 h-m-p 0.0015 0.0075 31.9597 YC 5871.568574 1 0.0030 871 | 5/22
31 h-m-p 0.0030 0.0376 31.7386 YC 5871.047926 1 0.0021 897 | 5/22
32 h-m-p 0.0071 0.0586 9.5635 YC 5870.839253 1 0.0037 923 | 5/22
33 h-m-p 0.0029 0.0385 11.9553 CCC 5870.639772 2 0.0026 952 | 5/22
34 h-m-p 0.0027 0.1151 11.5831 +CCCC 5868.874775 3 0.0169 984 | 5/22
35 h-m-p 0.0138 0.0691 7.5797 YYCC 5867.473005 3 0.0102 1013 | 4/22
36 h-m-p 0.0022 0.0112 21.6619 -YYC 5867.375422 2 0.0002 1041 | 4/22
37 h-m-p 0.0000 0.0007 333.0035 +++ 5862.951373 m 0.0007 1067 | 4/22
38 h-m-p 0.0000 0.0000 44.3234
h-m-p: 8.17381503e-20 4.08690752e-19 4.43234134e+01 5862.951373
.. | 4/22
39 h-m-p 0.0000 0.0001 1219.5443 YYYYY 5861.761387 4 0.0000 1118 | 4/22
40 h-m-p 0.0000 0.0001 171.3978 CYCCC 5861.288845 4 0.0000 1150 | 4/22
41 h-m-p 0.0000 0.0001 213.1729 ++ 5860.085278 m 0.0001 1175 | 4/22
42 h-m-p 0.0000 0.0002 1070.0459 ++ 5854.519652 m 0.0002 1200 | 4/22
43 h-m-p -0.0000 -0.0000 406.0042
h-m-p: -2.94002090e-21 -1.47001045e-20 4.06004219e+02 5854.519652
.. | 4/22
44 h-m-p 0.0000 0.0001 273.4322 YCCC 5853.644291 3 0.0000 1252 | 4/22
45 h-m-p 0.0000 0.0001 197.5979 +YCC 5852.624123 2 0.0001 1281 | 4/22
46 h-m-p 0.0000 0.0000 394.9541 +YC 5852.373379 1 0.0000 1308 | 4/22
47 h-m-p 0.0000 0.0000 156.7734 ++ 5852.119231 m 0.0000 1333 | 4/22
48 h-m-p -0.0000 -0.0000 78.9041
h-m-p: -2.05353518e-21 -1.02676759e-20 7.89040564e+01 5852.119231
.. | 4/22
49 h-m-p 0.0000 0.0001 101.8047 YCCC 5852.017196 3 0.0000 1385 | 4/22
50 h-m-p 0.0000 0.0001 122.8074 CYC 5851.949141 2 0.0000 1413 | 4/22
51 h-m-p 0.0000 0.0001 75.3331 CCC 5851.915707 2 0.0000 1442 | 4/22
52 h-m-p 0.0000 0.0030 37.4467 ++YCC 5851.712441 2 0.0004 1472 | 4/22
53 h-m-p 0.0000 0.0005 333.7830 YC 5851.626296 1 0.0000 1498 | 4/22
54 h-m-p 0.0000 0.0002 74.5566 +CC 5851.510411 1 0.0001 1526 | 4/22
55 h-m-p 0.0003 0.0014 18.7986 +YC 5851.430701 1 0.0007 1553 | 4/22
56 h-m-p 0.0014 0.0073 9.6799 YC 5851.329966 1 0.0032 1579 | 4/22
57 h-m-p 0.0056 0.2795 5.4938 CC 5851.248189 1 0.0080 1606 | 4/22
58 h-m-p 0.0110 0.3548 3.9774 CC 5851.233450 1 0.0031 1633 | 4/22
59 h-m-p 0.0016 0.0081 1.8426 YC 5851.230073 1 0.0028 1659 | 4/22
60 h-m-p 0.0037 0.6605 1.3967 C 5851.227830 0 0.0038 1684 | 4/22
61 h-m-p 0.0062 3.1201 1.2972 YC 5851.225948 1 0.0047 1710 | 4/22
62 h-m-p 0.0095 0.0476 0.4549 Y 5851.225642 0 0.0039 1735 | 4/22
63 h-m-p 0.0092 3.0731 0.1920 Y 5851.225537 0 0.0055 1778 | 4/22
64 h-m-p 0.0114 0.4560 0.0934 Y 5851.225347 0 0.0211 1821 | 4/22
65 h-m-p 0.0071 0.4207 0.2797 C 5851.225045 0 0.0097 1864 | 4/22
66 h-m-p 0.0758 0.3792 0.0216 YC 5851.222362 1 0.1710 1908 | 4/22
67 h-m-p 1.6000 8.0000 0.0001 Y 5851.222331 0 1.0637 1951 | 4/22
68 h-m-p 1.6000 8.0000 0.0000 Y 5851.222331 0 1.1067 1994 | 4/22
69 h-m-p 1.6000 8.0000 0.0000 Y 5851.222331 0 0.9965 2037 | 4/22
70 h-m-p 1.6000 8.0000 0.0000 Y 5851.222331 0 1.1397 2080 | 4/22
71 h-m-p 1.6000 8.0000 0.0000 C 5851.222331 0 1.6000 2123 | 4/22
72 h-m-p 1.6000 8.0000 0.0000 ------------Y 5851.222331 0 0.0000 2178
Out..
lnL = -5851.222331
2179 lfun, 8716 eigenQcodon, 111129 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -5875.032244 S = -5605.429580 -260.624986
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 401 patterns 2:17
did 20 / 401 patterns 2:17
did 30 / 401 patterns 2:17
did 40 / 401 patterns 2:18
did 50 / 401 patterns 2:18
did 60 / 401 patterns 2:18
did 70 / 401 patterns 2:18
did 80 / 401 patterns 2:18
did 90 / 401 patterns 2:18
did 100 / 401 patterns 2:18
did 110 / 401 patterns 2:18
did 120 / 401 patterns 2:18
did 130 / 401 patterns 2:18
did 140 / 401 patterns 2:18
did 150 / 401 patterns 2:18
did 160 / 401 patterns 2:18
did 170 / 401 patterns 2:18
did 180 / 401 patterns 2:18
did 190 / 401 patterns 2:18
did 200 / 401 patterns 2:18
did 210 / 401 patterns 2:18
did 220 / 401 patterns 2:18
did 230 / 401 patterns 2:18
did 240 / 401 patterns 2:18
did 250 / 401 patterns 2:19
did 260 / 401 patterns 2:19
did 270 / 401 patterns 2:19
did 280 / 401 patterns 2:19
did 290 / 401 patterns 2:19
did 300 / 401 patterns 2:19
did 310 / 401 patterns 2:19
did 320 / 401 patterns 2:19
did 330 / 401 patterns 2:19
did 340 / 401 patterns 2:19
did 350 / 401 patterns 2:19
did 360 / 401 patterns 2:19
did 370 / 401 patterns 2:19
did 380 / 401 patterns 2:19
did 390 / 401 patterns 2:19
did 400 / 401 patterns 2:19
did 401 / 401 patterns 2:19end of tree file.
Time used: 2:19
Model 7: beta
TREE # 1
(1, 5, (((10, (2, 8)), (3, 7)), ((4, 9), 6))); MP score: 905
0.068856 0.050445 0.082204 0.060150 0.051201 0.094859 0.058218 0.059775 0.036347 0.046388 0.063352 0.055041 0.038440 0.010240 0.092812 0.025759 0.054784 1.803649 0.755834 1.930596
ntime & nrate & np: 17 1 20
Bounds (np=20):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 10.450178
np = 20
lnL0 = -7157.022602
Iterating by ming2
Initial: fx= 7157.022602
x= 0.06886 0.05044 0.08220 0.06015 0.05120 0.09486 0.05822 0.05978 0.03635 0.04639 0.06335 0.05504 0.03844 0.01024 0.09281 0.02576 0.05478 1.80365 0.75583 1.93060
1 h-m-p 0.0000 0.0000 5667.7393 ++ 6598.731853 m 0.0000 25 | 1/20
2 h-m-p 0.0000 0.0001 1420.0035 ++ 6505.871150 m 0.0001 48 | 0/20
3 h-m-p 0.0000 0.0000 50382.4564
h-m-p: 5.04023787e-22 2.52011893e-21 5.03824564e+04 6505.871150
.. | 0/20
4 h-m-p 0.0000 0.0000 188936.1183 -CCYYYCYCCC 6492.804592 9 0.0000 106 | 0/20
5 h-m-p 0.0000 0.0000 2126.3545 ++ 6488.275727 m 0.0000 129 | 1/20
6 h-m-p 0.0000 0.0000 1469.4103 ++ 6472.636146 m 0.0000 152 | 2/20
7 h-m-p 0.0000 0.0000 1879.9808 ++ 6451.349359 m 0.0000 175 | 3/20
8 h-m-p 0.0000 0.0000 17956.8597 ++ 6432.679018 m 0.0000 198 | 4/20
9 h-m-p 0.0000 0.0001 5420.2617 +YYCCYCCC 6273.392314 7 0.0001 235 | 4/20
10 h-m-p 0.0001 0.0007 362.6316 YYCC 6267.852363 3 0.0001 262 | 4/20
11 h-m-p 0.0009 0.0064 50.6770 CCC 6267.199939 2 0.0003 289 | 4/20
12 h-m-p 0.0003 0.0039 56.0876 +CCCCC 6263.108305 4 0.0014 321 | 4/20
13 h-m-p 0.0003 0.0016 280.4527 +YYCCC 6249.755862 4 0.0009 351 | 4/20
14 h-m-p 0.0003 0.0014 346.4450 YCCCC 6240.621574 4 0.0005 381 | 4/20
15 h-m-p 0.0006 0.0029 144.0412 CCCC 6234.273488 3 0.0008 410 | 4/20
16 h-m-p 0.0014 0.0122 85.3588 CYCC 6229.192788 3 0.0011 438 | 4/20
17 h-m-p 0.0011 0.0057 48.3013 CCCC 6226.396118 3 0.0013 467 | 4/20
18 h-m-p 0.0012 0.0074 54.4363 +YCCC 6219.613945 3 0.0032 496 | 4/20
19 h-m-p 0.0007 0.0035 200.9131 CCCC 6212.323325 3 0.0010 525 | 4/20
20 h-m-p 0.0091 0.0906 21.4069 +YYYYYCYCCC 6177.265645 10 0.0437 562 | 4/20
21 h-m-p 0.0011 0.0053 128.1762 CCC 6172.487134 2 0.0010 589 | 4/20
22 h-m-p 0.0073 0.0363 5.2189 +YCYYYYYCCC 6059.761604 10 0.0354 627 | 3/20
23 h-m-p 0.0000 0.0000 1493.6041 YCCC 6059.355205 3 0.0000 655 | 3/20
24 h-m-p 0.0009 0.4158 2.5842 ++++YYCCC 6032.510594 4 0.1744 688 | 3/20
25 h-m-p 0.1684 0.8421 0.2064 ++ 5954.437864 m 0.8421 711 | 3/20
26 h-m-p 0.0302 0.5846 5.7638 +YYCCCC 5869.566515 5 0.2041 760 | 3/20
27 h-m-p 0.1668 0.8338 0.2445 +YYYYYCCCCC 5858.831304 9 0.6894 797 | 3/20
28 h-m-p 0.0439 0.2197 3.0564 ++ 5835.948504 m 0.2197 837 | 3/20
29 h-m-p 1.6000 8.0000 0.1407 CYCC 5831.200603 3 2.0434 865 | 3/20
30 h-m-p 0.2941 1.4705 0.0989 ++ 5828.507869 m 1.4705 905 | 4/20
31 h-m-p 1.2238 6.1190 0.1035 CCCC 5827.178306 3 1.6797 951 | 4/20
32 h-m-p 1.6000 8.0000 0.0379 YCCC 5825.154428 3 3.8041 995 | 4/20
33 h-m-p 1.6000 8.0000 0.0197 YCCC 5824.783216 3 2.4227 1039 | 4/20
34 h-m-p 1.6000 8.0000 0.0243 CCC 5824.609744 2 1.9535 1082 | 4/20
35 h-m-p 1.6000 8.0000 0.0118 ++ 5824.136700 m 8.0000 1121 | 4/20
36 h-m-p 1.2204 6.1021 0.0254 CCCC 5823.828080 3 1.9084 1166 | 4/20
37 h-m-p 1.0539 8.0000 0.0460 CCC 5823.678550 2 1.6054 1209 | 4/20
38 h-m-p 1.6000 8.0000 0.0109 YC 5823.536672 1 3.6107 1249 | 4/20
39 h-m-p 1.6000 8.0000 0.0235 CCC 5823.429092 2 2.3332 1292 | 4/20
40 h-m-p 1.6000 8.0000 0.0131 YC 5823.347335 1 2.8553 1332 | 4/20
41 h-m-p 1.6000 8.0000 0.0072 CC 5823.312526 1 2.3383 1373 | 4/20
42 h-m-p 1.6000 8.0000 0.0057 YC 5823.275241 1 3.1331 1413 | 4/20
43 h-m-p 1.6000 8.0000 0.0040 YC 5823.249485 1 3.5176 1453 | 4/20
44 h-m-p 1.6000 8.0000 0.0039 C 5823.246587 0 1.8046 1492 | 4/20
45 h-m-p 1.6000 8.0000 0.0013 YC 5823.243845 1 3.5265 1532 | 4/20
46 h-m-p 1.6000 8.0000 0.0018 YC 5823.243172 1 2.9645 1572 | 4/20
47 h-m-p 1.6000 8.0000 0.0009 +YC 5823.241906 1 4.4457 1613 | 4/20
48 h-m-p 1.6000 8.0000 0.0008 +Y 5823.240657 0 5.3758 1653 | 4/20
49 h-m-p 1.6000 8.0000 0.0010 YC 5823.239516 1 2.9047 1693 | 4/20
50 h-m-p 1.6000 8.0000 0.0009 C 5823.239221 0 2.4151 1732 | 4/20
51 h-m-p 1.6000 8.0000 0.0005 C 5823.239132 0 1.8710 1771 | 4/20
52 h-m-p 1.6000 8.0000 0.0001 +Y 5823.239099 0 4.0576 1811 | 4/20
53 h-m-p 1.6000 8.0000 0.0002 C 5823.239093 0 1.4174 1850 | 4/20
54 h-m-p 1.6000 8.0000 0.0000 C 5823.239093 0 1.5739 1889 | 4/20
55 h-m-p 1.6000 8.0000 0.0000 Y 5823.239093 0 2.6906 1928 | 4/20
56 h-m-p 1.6000 8.0000 0.0000 Y 5823.239093 0 3.0861 1967 | 4/20
57 h-m-p 1.6000 8.0000 0.0000 C 5823.239093 0 2.0609 2006 | 4/20
58 h-m-p 1.6000 8.0000 0.0000 --C 5823.239093 0 0.0250 2047
Out..
lnL = -5823.239093
2048 lfun, 22528 eigenQcodon, 348160 P(t)
end of tree file.
Time used: 6:50
Model 8: beta&w>1
TREE # 1
(1, 5, (((10, (2, 8)), (3, 7)), ((4, 9), 6))); MP score: 905
0.044285 0.016250 0.060309 0.031705 0.051684 0.080947 0.049457 0.041126 0.073644 0.050843 0.013222 0.053011 0.049570 0.066020 0.065500 0.016001 0.023300 1.697349 0.900000 1.162549 1.288844 1.300000
ntime & nrate & np: 17 2 22
Bounds (np=22):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 7.329664
np = 22
lnL0 = -7513.192457
Iterating by ming2
Initial: fx= 7513.192457
x= 0.04428 0.01625 0.06031 0.03170 0.05168 0.08095 0.04946 0.04113 0.07364 0.05084 0.01322 0.05301 0.04957 0.06602 0.06550 0.01600 0.02330 1.69735 0.90000 1.16255 1.28884 1.30000
1 h-m-p 0.0000 0.0000 9412.3076 ++ 6634.376997 m 0.0000 27 | 1/22
2 h-m-p 0.0000 0.0000 1713.3014 ++ 6535.610117 m 0.0000 52 | 1/22
3 h-m-p 0.0000 0.0000 4871.1123 ++ 6496.220190 m 0.0000 77 | 2/22
4 h-m-p 0.0000 0.0000 1100.6700 ++ 6473.212358 m 0.0000 102 | 3/22
5 h-m-p 0.0000 0.0000 14768.1389 ++ 6462.889951 m 0.0000 127 | 3/22
6 h-m-p 0.0000 0.0000 1053.9186 ++ 6447.042489 m 0.0000 152 | 4/22
7 h-m-p 0.0001 0.0017 709.6317 ++YCYYCCC 6242.148934 6 0.0014 189 | 3/22
8 h-m-p 0.0000 0.0000 78547.0422 YCCCC 6232.136459 4 0.0000 221 | 3/22
9 h-m-p 0.0000 0.0000 5628.8826 CYCCCC 6217.968549 5 0.0000 255 | 3/22
10 h-m-p 0.0000 0.0002 265.3140 YCCCC 6215.631034 4 0.0001 287 | 3/22
11 h-m-p 0.0000 0.0008 348.9917 +++ 6157.910044 m 0.0008 313 | 3/22
12 h-m-p 0.0000 0.0000 319.2949
h-m-p: 5.32873791e-21 2.66436895e-20 3.19294936e+02 6157.910044
.. | 3/22
13 h-m-p 0.0000 0.0001 5144.8067 YYYYYC 6134.775949 5 0.0000 365 | 3/22
14 h-m-p 0.0000 0.0000 1702.7788 ++ 6093.730110 m 0.0000 390 | 3/22
15 h-m-p 0.0000 0.0000 12148.4740 ++ 6044.313738 m 0.0000 415 | 3/22
16 h-m-p 0.0000 0.0000 1484.2529 ++ 6016.101433 m 0.0000 440 | 4/22
17 h-m-p 0.0001 0.0003 637.2202 +YYYCC 5978.030241 4 0.0002 471 | 4/22
18 h-m-p 0.0000 0.0002 625.0855 +CYCC 5964.010947 3 0.0001 502 | 4/22
19 h-m-p 0.0000 0.0001 624.5850 YCCC 5960.090995 3 0.0001 532 | 4/22
20 h-m-p 0.0001 0.0012 291.4840 CYCC 5956.870460 3 0.0002 562 | 4/22
21 h-m-p 0.0005 0.0026 96.0375 CCCC 5954.523373 3 0.0006 593 | 4/22
22 h-m-p 0.0019 0.0143 32.0874 YC 5954.134093 1 0.0008 619 | 4/22
23 h-m-p 0.0010 0.0282 25.2550 YC 5953.476880 1 0.0023 645 | 4/22
24 h-m-p 0.0009 0.0099 63.6646 YC 5952.384220 1 0.0017 671 | 4/22
25 h-m-p 0.0009 0.0045 107.9553 CCC 5950.981650 2 0.0013 700 | 4/22
26 h-m-p 0.0006 0.0031 103.3032 YCCC 5949.664176 3 0.0012 730 | 4/22
27 h-m-p 0.0006 0.0030 56.4012 ++ 5948.076243 m 0.0030 755 | 4/22
28 h-m-p -0.0000 -0.0000 44.0048
h-m-p: -0.00000000e+00 -0.00000000e+00 4.40048429e+01 5948.076243
.. | 4/22
29 h-m-p 0.0000 0.0001 953.9936 +CYCYYCC 5913.389623 6 0.0001 813 | 3/22
30 h-m-p 0.0000 0.0000 26492.0751 +CYC 5911.119318 2 0.0000 842 | 3/22
31 h-m-p 0.0000 0.0000 5985.6456 +YYYYCYCCC 5898.879061 8 0.0000 879 | 3/22
32 h-m-p 0.0000 0.0001 1382.3268 +YCCC 5876.326298 3 0.0001 910 | 3/22
33 h-m-p 0.0001 0.0003 459.8375 YCCCC 5868.284566 4 0.0001 942 | 3/22
34 h-m-p 0.0000 0.0002 306.7007 ++ 5860.575782 m 0.0002 967 | 4/22
35 h-m-p 0.0000 0.0001 322.7570 ++ 5857.593072 m 0.0001 992 | 4/22
36 h-m-p 0.0000 0.0000 138.1130
h-m-p: 1.12950314e-20 5.64751569e-20 1.38112953e+02 5857.593072
.. | 4/22
37 h-m-p 0.0000 0.0000 554.3542 +YYYYC 5853.153118 4 0.0000 1044 | 4/22
38 h-m-p 0.0000 0.0000 1240.2059 ++ 5847.190201 m 0.0000 1069 | 4/22
39 h-m-p 0.0000 0.0000 1886.1840 +YCYCCC 5845.166879 5 0.0000 1103 | 4/22
40 h-m-p 0.0000 0.0004 192.2950 +YCCC 5843.007632 3 0.0001 1134 | 4/22
41 h-m-p 0.0000 0.0002 283.4104 ++ 5838.521860 m 0.0002 1159 | 4/22
42 h-m-p 0.0002 0.0105 231.2318 CYCC 5836.414946 3 0.0002 1189 | 4/22
43 h-m-p 0.0004 0.0021 103.9481 CCCCC 5834.693329 4 0.0005 1222 | 4/22
44 h-m-p 0.0009 0.0076 57.9928 CCCC 5833.014378 3 0.0015 1253 | 4/22
45 h-m-p 0.0024 0.0119 37.9523 YCC 5832.569283 2 0.0010 1281 | 4/22
46 h-m-p 0.0009 0.0196 41.5912 CYC 5832.202905 2 0.0010 1309 | 4/22
47 h-m-p 0.0021 0.0441 19.6477 CCC 5831.865042 2 0.0028 1338 | 4/22
48 h-m-p 0.0050 0.0496 10.9316 CCC 5831.649054 2 0.0046 1367 | 4/22
49 h-m-p 0.0036 0.0484 13.7402 CC 5831.435543 1 0.0040 1394 | 4/22
50 h-m-p 0.0319 0.2493 1.7262 YC 5831.192765 1 0.0187 1420 | 4/22
51 h-m-p 0.0040 0.0465 8.1523 YCCC 5830.335512 3 0.0066 1450 | 4/22
52 h-m-p 0.0026 0.0129 14.6055 ++ 5824.318475 m 0.0129 1475 | 5/22
53 h-m-p 0.0031 0.0156 26.4275 CCC 5823.172838 2 0.0031 1504 | 5/22
54 h-m-p 0.0414 0.4224 1.9642 YC 5823.139544 1 0.0079 1530 | 4/22
55 h-m-p 0.0160 8.0000 1.5266 +YCCC 5822.549595 3 0.1047 1561 | 4/22
56 h-m-p 0.0203 0.1016 1.6471 ++ 5822.062662 m 0.1016 1586 | 4/22
57 h-m-p 1.6000 8.0000 0.1025 YCC 5821.706073 2 1.2149 1614 | 4/22
58 h-m-p 0.1381 0.6906 0.3304 ++ 5821.634335 m 0.6906 1657 | 5/22
59 h-m-p 1.6000 8.0000 0.0978 YC 5821.615315 1 0.7911 1701 | 5/22
60 h-m-p 1.6000 8.0000 0.0432 YC 5821.612019 1 1.0008 1744 | 5/22
61 h-m-p 1.6000 8.0000 0.0013 C 5821.611608 0 1.4568 1786 | 5/22
62 h-m-p 1.6000 8.0000 0.0005 C 5821.611529 0 1.6225 1828 | 5/22
63 h-m-p 1.6000 8.0000 0.0004 C 5821.611518 0 2.1420 1870 | 5/22
64 h-m-p 1.6000 8.0000 0.0003 C 5821.611514 0 2.1670 1912 | 5/22
65 h-m-p 1.6000 8.0000 0.0001 C 5821.611514 0 1.6189 1954 | 5/22
66 h-m-p 1.6000 8.0000 0.0000 C 5821.611514 0 1.3436 1996 | 5/22
67 h-m-p 1.6000 8.0000 0.0000 C 5821.611514 0 0.6170 2038 | 5/22
68 h-m-p 1.1030 8.0000 0.0000 C 5821.611514 0 0.2758 2080 | 5/22
69 h-m-p 0.3970 8.0000 0.0000 -C 5821.611514 0 0.0248 2123 | 5/22
70 h-m-p 0.0171 8.0000 0.0000 --------Y 5821.611514 0 0.0000 2173
Out..
lnL = -5821.611514
2174 lfun, 26088 eigenQcodon, 406538 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -5873.595341 S = -5620.092749 -282.401604
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 401 patterns 12:02
did 20 / 401 patterns 12:02
did 30 / 401 patterns 12:03
did 40 / 401 patterns 12:03
did 50 / 401 patterns 12:03
did 60 / 401 patterns 12:03
did 70 / 401 patterns 12:03
did 80 / 401 patterns 12:04
did 90 / 401 patterns 12:04
did 100 / 401 patterns 12:04
did 110 / 401 patterns 12:04
did 120 / 401 patterns 12:04
did 130 / 401 patterns 12:05
did 140 / 401 patterns 12:05
did 150 / 401 patterns 12:05
did 160 / 401 patterns 12:05
did 170 / 401 patterns 12:05
did 180 / 401 patterns 12:05
did 190 / 401 patterns 12:06
did 200 / 401 patterns 12:06
did 210 / 401 patterns 12:06
did 220 / 401 patterns 12:06
did 230 / 401 patterns 12:06
did 240 / 401 patterns 12:07
did 250 / 401 patterns 12:07
did 260 / 401 patterns 12:07
did 270 / 401 patterns 12:07
did 280 / 401 patterns 12:07
did 290 / 401 patterns 12:08
did 300 / 401 patterns 12:08
did 310 / 401 patterns 12:08
did 320 / 401 patterns 12:08
did 330 / 401 patterns 12:08
did 340 / 401 patterns 12:09
did 350 / 401 patterns 12:09
did 360 / 401 patterns 12:09
did 370 / 401 patterns 12:09
did 380 / 401 patterns 12:09
did 390 / 401 patterns 12:09
did 400 / 401 patterns 12:10
did 401 / 401 patterns 12:10end of tree file.
Time used: 12:10
The loglikelihoods for models M1, M2, M7 and M8 are -5851.222331 -5851.222331 -5823.239093 -5821.611514 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
BF_005I_N_ABN10915_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNRSRSGTPSPKVTFKQESDGSDSESERRNGNRNGARPKNNNSRGSAPKPEKPKAAP
BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPGNQSPKVTFKQESDGSDSESERRNGNRNGARPKNNNNRGFGSKPEKPKAAP
BF_141I_N_ABN10939_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPGSQSPKVTFKQESDGSDSESERRNGNRSGARPKNNNNRGGNSKPEKPKAAP
BF_493I_N_ABN10931_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPTSQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGAPKPEKPKAAP
HKU9_1_BF_005I_N_YP_001039975_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNRSRSGTPSPKVTFKQESDGSDSESERRNGNRNGARPKNNNSRGSAPKPEKPKAAP
UNKNOWN_HM211098_N_ADM33562_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPTSQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGAPKPEKPKAAP
Rousettus_spp_Jinghong_2009_NA_AVP25410_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPSNQ-AKVTFKQESDNSDSESERRNGNRSGARPKNNNNRGANPKPEKPKAAP
UNKNOWN_HM211099_N_ADM33570_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPGSQSPKVTFKQESDGSDSESERRNGNRNGARPKNNNGRGAGSKPEKPKAAP
UNKNOWN_HM211100_N_ADM33578_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRLIFQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGAPKPEKPKAAP
UNKNOWN_HM211101_N_ADM33586_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPSNQ-PKVTFKQESDGSDSESERRNGNRNGARPKTNNNRGAGSKPEKPKAAP
*****:.* .*********.************.***.*.**.** .*********
BF_005I_N_ABN10915_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 PQNVSWFAPLVQTGKAELRFPRGEGVPVSQGVDSTYEHGYWLRTQRSFQKGGKQVLANPR
BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 PQNVSWYAPLVQTGKADLRFPRGEGVPISQGVDPIYQHGYWTRTQRSFQKGGKTVQANPR
BF_141I_N_ABN10939_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 PQNVSWFAPLVQTGKQDLRFPRGEGVPISQGVDPVYLHGYWVRTQRNFQKGGKTVQANPR
BF_493I_N_ABN10931_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 PQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGYWVRTQRTFQKGGKPVSANPR
HKU9_1_BF_005I_N_YP_001039975_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 PQNVSWFAPLVQTGKAELRFPRGEGVPVSQGVDSTYEHGYWLRTQRSFQKGGKQVLANPR
UNKNOWN_HM211098_N_ADM33562_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 PQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGYWVRTQRTFQKGGKPVSANPR
Rousettus_spp_Jinghong_2009_NA_AVP25410_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 PQNVSWFAPLVQTGKQDLRFPRGEGVPISQGVDLNYLHGYWVRTQRSYQKGGKTVQANAR
UNKNOWN_HM211099_N_ADM33570_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 PQNVSWYAPLVQTGKNDLRFPRGQGVPISQGIDDIYNHGYWVRTQRNFQKGGKQVAANPR
UNKNOWN_HM211100_N_ADM33578_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 PQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGYWVRTQRTFQKGGKPVSANPR
UNKNOWN_HM211101_N_ADM33586_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 PQNVSWYAPLVQTGKADLRFPRGEGVPISQGVDPIYQHGYWTRTQRSFQKGGKTVQANPR
******:******** :******:***:***:* * **** ****.:***** * **.*
BF_005I_N_ABN10915_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 WYFYYTGTGRFGDLRFGTKNPDIVWVGQEGANINRLGDMGTRNPSNDGAIPVQLAGGIPK
BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 WYFYYTGTGRYADLRWGQKNPDIVWVGEEGANINRVGDMGTRNPNNDAAIAVQLGNGIPK
BF_141I_N_ABN10939_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 WYFYYTGTGRHADLRWGQKNPDLIWVGEDGANINRIGDMGTRNPNNDSAIPVQFGSGIPK
BF_493I_N_ABN10931_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 WYFYYTGTGRYGDMRYGTKNPDIYWVGEEGANVNRVGDMGTRNPNNDAAISVQLADGIPK
HKU9_1_BF_005I_N_YP_001039975_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 WYFYYTGTGRFGDLRFGTKNPDIVWVGQEGANINRLGDMGTRNPSNDGAIPVQLAGGIPK
UNKNOWN_HM211098_N_ADM33562_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 WYFYYTGTGRYGDMRYGTKNPDIYWVGEEGANVNRVGDMGTRNPNNDAAISVQLADGIPK
Rousettus_spp_Jinghong_2009_NA_AVP25410_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 WYFYYTGTGRFGDLRWGQKNPEIIWVGEEGANVNRVGDMGTRNPNNDAAIPVQLSGGIPK
UNKNOWN_HM211099_N_ADM33570_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 WYFYYTGTGRYADLRYGSKNPDIIWVGAEGANINRVGDIGTRNPSNDAAIPVQLADGIPK
UNKNOWN_HM211100_N_ADM33578_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 WYFYYTGTGRYGDMRYGTKNPDIYWVGEEGANVNRVGDMGTRNPNNDAAISVQLADGIPK
UNKNOWN_HM211101_N_ADM33586_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 WYFYYTGTGRYADLRWGQKNPDIVWVGEEGANINRVGDMGTRNPNNDAAIAVQLGNGIPK
**********..*:*:* ***:: *** :***:**:**:*****.**.**.**:..****
BF_005I_N_ABN10915_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GFYAEGRGSRGNSRSSSRNSSRASSRGNSRASSRGASPGR--PAANPSTEPWMAYLVQKL
BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GFYAEGRGSRGNSRNSSRNSSRASSRSSSRPNSRGASPGRNTPNPGAGSEPWMAYLVSKL
BF_141I_N_ABN10939_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GFYAEGRNSRGNSRNSSRNSSRASTRGNSRANSRGASPGRNTPSGGSNSEPWMAYLVQKL
BF_493I_N_ABN10931_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GFYAEGRNSRGNSRNSSRNSSRASSRGGSRPGSRGASPGRATPS-GSGAEPWMAYLVSKL
HKU9_1_BF_005I_N_YP_001039975_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GFYAEGRGSRGNSRSSSRNSSRASSRGNSRASSRGASPGR--PAANPSTEPWMAYLVQKL
UNKNOWN_HM211098_N_ADM33562_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 GFYAEGRNSRGNSRNSSRNSSRASSRGGSRPGSRGASPGRATPS-GSGVEPWMAYLVSKL
Rousettus_spp_Jinghong_2009_NA_AVP25410_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 GFYAEGRNSRGNSRNGSRNSSRASSRGSSRASSRGASPGRNTPSGGSNSEPWMAYLVQKL
UNKNOWN_HM211099_N_ADM33570_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 GFYAEGRNSRGNSRNNSRSSSRASSRGSSRASSRGPSPGRATPS-GGNSEPWMAYLVQKL
UNKNOWN_HM211100_N_ADM33578_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 GFYAEGRNSRGNSRNSSRNSSRASSRGGSRPGSRGASPGRATPS-GSGAEPWMAYLVSKL
UNKNOWN_HM211101_N_ADM33586_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 GFYAEGRGSRGNSRNSSRNSSRASSRSSSRPNSRGASPGRNTPNPGSGSEPWMAYLVSKL
*******.******..**.*****:*..**..***.**** * . . ********.**
BF_005I_N_ABN10915_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ERLESQVSGTKPATKNPVQVTKNEAAANAKKLRHKRTAHKGSGVTVNYGRRGPGDLEGNF
BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ENLEAKVNGTKPETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNF
BF_141I_N_ABN10939_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 EALETKVNGNKSETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTANFGRRGPGELEGNF
BF_493I_N_ABN10931_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ETLEAKVNGTKSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNF
HKU9_1_BF_005I_N_YP_001039975_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ERLESQVSGTKPATKNPVQVTKNEAAANAKKLRHKRTAHKGSGVTVNYGRRGPGDLEGNF
UNKNOWN_HM211098_N_ADM33562_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 ETLEAKVNGTKSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNF
Rousettus_spp_Jinghong_2009_NA_AVP25410_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 EALETKVNGNKSETKTPVQVSKNAAAENAKRLRHKRTPHKGSGVTVNYGRRGPGDWEGNL
UNKNOWN_HM211099_N_ADM33570_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 EALETKVNGNKPATKAPVQVSKNAASENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNF
UNKNOWN_HM211100_N_ADM33578_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 ETLEAKVNGTKSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNF
UNKNOWN_HM211101_N_ADM33586_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 ENLEAKVNGTKPETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNF
* **::*.*.*. ** ****:*. *: ***:******.******* *:******: ***:
BF_005I_N_ABN10915_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GDREMIKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTRDEDDALWLHYKGAIKLPKDDPNY
BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GDQTMLKLGTDDPRFPAAAQMAPNTAAFLFMSHFSTREEGDALWLNYKGAIKLPKDDPNY
BF_141I_N_ABN10939_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GDLEMLKLGADDPRFPAVAQMAPNVAAFMFMSHFSTRDEEDALWLNYRGAIKLPKSDPNF
BF_493I_N_ABN10931_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGAIKLPKDDPNY
HKU9_1_BF_005I_N_YP_001039975_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 GDREMIKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTRDEDDALWLHYKGAIKLPKDDPNY
UNKNOWN_HM211098_N_ADM33562_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 GDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGAIKLPKDDPNY
Rousettus_spp_Jinghong_2009_NA_AVP25410_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 GDQTILKLGTDDPRFPVAAQMAPNVASFLFMSHFSTRDEDEALWLQYKGAIKLPKADPNY
UNKNOWN_HM211099_N_ADM33570_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 GDQTMLKLGTDDPRFPAAAQMAPNTAAFLFMSHFSTREEGDALWLNYKGAIKLPKDDPNY
UNKNOWN_HM211100_N_ADM33578_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 GDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGAIKLPKDDPNY
UNKNOWN_HM211101_N_ADM33586_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 GDQTMLKLGTDDPRFPAAAQMAPNVAAFLFMSHFSTREEGDALWLNYKGAIKLPKDDPNY
** ::***.*****...******.::*:****:***:* :****:*:******* ***:
BF_005I_N_ABN10915_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 EQWTKILAENLNAYKDFPPTEPKKDKKKKEETAQDTVIFEDASTGTDQTVVKVWVKDQDA
BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 NQWVKILEENLNAYKSFPPPEPKKDKKKKEETSSETVVFEDASTGTDQPVVKVWVKDEGM
BF_141I_N_ABN10939_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 EQWTKLLEENLNAYKTFPPPAPKKDKKKKEEASQEIAIFEDASTGTDQQIVKVWVKDEGA
BF_493I_N_ABN10931_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 EQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFEDASTGTDQAVVKVWVKDEGA
HKU9_1_BF_005I_N_YP_001039975_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 EQWTKILAENLNAYKDFPPTEPKKDKKKKEETAQDTVIFEDASTGTDQTVVKVWVKDQDA
UNKNOWN_HM211098_N_ADM33562_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 EQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFEDASTGTDQAVVKVWVKDEGA
Rousettus_spp_Jinghong_2009_NA_AVP25410_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 EQWVKFLDENLNAYKNFPPPEPKKDKKKKEEVSQEIIVHEDASTGTDQPIVKVWVKDEGA
UNKNOWN_HM211099_N_ADM33570_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 NQWVKILEENLNAYKSFPPPEPKKEKKKKEETSSETVVFEDASTGTDQPVVKVWVKDEGM
UNKNOWN_HM211100_N_ADM33578_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 EQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFEDASTGTDQAVVKVWVKDEGA
UNKNOWN_HM211101_N_ADM33586_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 NQWVKVLEENLNAYKDFPPPEPKKDKKKKEEVSAETVVFEDASTGTDQPVVKVWVKDEGM
:**.*.* ******* ***. ***:****** : : :.********* :*******:.
BF_005I_N_ABN10915_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 QTDDEWLGGDETVYEDEDDRPKTQRRHKKRGSTASRVTIADPTNAGAERS
BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 QTDDEWLGGDDTVYEEEEDKPKVQRRHKKRGSTASRVTVADPTNLAAERS
BF_141I_N_ABN10939_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 QTDEEWLGGDDTVYEEEDDRPKTQRRHKKRNSTASRVTIADPMNATSERS
BF_493I_N_ABN10931_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 QTDDEWLGGDDTVYEEEDDRPKTQRRHKKRNSTASRVTIADPMNATSERS
HKU9_1_BF_005I_N_YP_001039975_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 QTDDEWLGGDETVYEDEDDRPKTQRRHKKRGSTASRVTIADPTNAGAERS
UNKNOWN_HM211098_N_ADM33562_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 QTDDEWLGGDDTVYEEEDDRPKTQRRHKKRNSTASRVTIADPMNATSERS
Rousettus_spp_Jinghong_2009_NA_AVP25410_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 QTDDEWLGGDDTVYEEEEDKPKVQRRHKKRGSTASRVTVADPTNVAAERS
UNKNOWN_HM211099_N_ADM33570_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 QTDDEWLGGDDTVYEEEEDKPKVQRRHKKRGSTASRVTVADPTNLAAERS
UNKNOWN_HM211100_N_ADM33578_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 QTDDEWLGGDDTVYEEEDDRPKTQRRHKKRNSTASRVTIADPMNATSERS
UNKNOWN_HM211101_N_ADM33586_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 QTDDEWLGGDDTVYEDEEDKPKTQRRHKKRHSTASRVTIADPTNVNSERS
***:******:****:*:*:**.******* *******:*** * :***
>BF_005I_N_ABN10915_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGTCTGGAAGGAACAGATCTAGATCTGGTACACCTTCCCCTAAGGTCACGTTCAAACAAGAATCTGACGGTTCTGACTCCGAATCTGAGCGCCGTAATGGTAACCGTAATGGTGCCCGCCCTAAAAATAATAATAGTAGAGGTAGTGCTCCCAAGCCTGAGAAGCCTAAGGCGGCCCCTCCTCAGAATGTTTCCTGGTTTGCACCGTTGGTTCAAACCGGTAAAGCTGAGTTGCGTTTCCCTAGAGGTGAAGGAGTGCCCGTGAGCCAAGGTGTTGATTCCACTTACGAGCACGGGTACTGGCTGCGTACACAGAGGTCTTTCCAGAAAGGTGGTAAGCAAGTTTTGGCTAACCCCCGCTGGTACTTCTATTATACTGGCACTGGTCGCTTTGGTGACCTTCGTTTTGGGACTAAGAACCCGGACATAGTCTGGGTTGGCCAAGAAGGTGCTAATATCAACCGTCTCGGTGATATGGGCACACGTAACCCCAGTAATGATGGTGCTATACCAGTGCAATTAGCTGGTGGCATACCTAAGGGCTTCTATGCTGAGGGGCGTGGCTCCCGTGGTAATAGCCGCAGTAGTTCACGCAACTCAAGCAGAGCATCATCGCGTGGTAACTCACGTGCTAGCTCCCGTGGTGCATCACCCGGTAGA------CCTGCTGCTAACCCGTCCACTGAGCCGTGGATGGCTTATCTTGTACAGAAGTTGGAAAGACTGGAGAGTCAGGTTAGTGGTACTAAGCCAGCTACCAAGAACCCAGTTCAAGTTACTAAGAATGAGGCTGCCGCCAATGCTAAGAAGCTCAGGCATAAACGCACTGCGCATAAGGGCAGTGGTGTTACTGTGAATTACGGCAGACGTGGCCCAGGTGATCTGGAGGGTAATTTTGGGGATCGTGAAATGATCAAACTTGGTACTGATGATCCCAGGTTTGCTGCCGCTGCGCAAATGGCCCCTAATGTTTCATCTTTTCTGTTTATGTCTCATTTATCCACGAGGGATGAAGATGATGCTCTGTGGCTCCATTATAAAGGTGCCATAAAGCTTCCTAAAGATGATCCCAACTATGAGCAGTGGACTAAGATTTTGGCAGAAAACTTGAACGCCTACAAAGATTTCCCTCCTACTGAGCCCAAAAAGGATAAAAAGAAGAAGGAAGAGACCGCCCAAGACACTGTCATCTTTGAAGATGCGTCTACTGGAACAGACCAAACAGTTGTTAAGGTCTGGGTAAAAGATCAGGACGCACAAACTGATGATGAGTGGCTGGGTGGTGATGAAACCGTTTATGAAGATGAGGACGACCGTCCAAAGACCCAGAGGAGACACAAGAAGAGAGGATCAACTGCCTCTCGTGTGACTATTGCGGACCCTACTAATGCAGGTGCCGAAAGATCT >BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGTCTGGACGGAATAAGCCCCGCCCTGGCAATCAATCACCTAAGGTGACGTTCAAACAAGAATCTGACGGTTCTGACTCCGAATCGGAACGCCGTAATGGTAACCGTAATGGTGCCCGTCCTAAAAATAATAATAATAGAGGTTTTGGTTCCAAGCCTGAGAAACCTAAGGCTGCCCCTCCTCAGAATGTTTCTTGGTATGCTCCCCTTGTCCAGACAGGAAAAGCAGATTTGCGATTCCCACGCGGAGAGGGTGTTCCCATAAGCCAGGGTGTGGATCCTATATATCAGCATGGTTATTGGACCCGCACACAGCGCAGTTTCCAAAAGGGTGGAAAAACTGTTCAGGCTAATCCTCGCTGGTACTTTTATTATACAGGTACCGGCCGTTATGCCGACCTCCGATGGGGTCAGAAGAACCCAGACATCGTTTGGGTTGGTGAAGAGGGTGCCAATATAAACCGTGTAGGTGATATGGGTACGCGTAATCCTAATAATGATGCTGCCATTGCCGTACAGCTTGGTAATGGCATACCTAAAGGGTTTTATGCAGAAGGCCGCGGCTCTCGTGGCAATAGCCGCAATAGTTCGCGCAATTCTAGCAGAGCTTCCTCTCGGAGCAGTTCTAGACCTAATTCCAGAGGTGCTTCTCCAGGCAGAAATACACCTAATCCTGGTGCTGGCAGTGAACCGTGGATGGCTTACTTAGTTAGTAAGTTGGAAAACTTGGAGGCTAAGGTTAATGGTACTAAACCTGAAACTAAGGCCCCAGTACAAGTTACCAAGAATGCTGCAGCTGAAAATGCAAAGAAACTCAGGCATAAGAGGACACCCCATAAGGGCAGTGGTGTTACCATGAATTTTGGACGGCGAGGTCCTGGTGATTTAGAGGGCAATTTTGGTGATCAGACTATGTTGAAACTTGGCACTGATGATCCCAGGTTTCCTGCCGCTGCGCAAATGGCACCTAATACGGCAGCATTTCTCTTCATGTCTCATTTTTCCACTAGGGAAGAAGGTGATGCCCTTTGGCTTAATTACAAAGGTGCTATCAAGCTTCCTAAGGATGATCCTAATTATAATCAGTGGGTTAAAATTTTGGAAGAGAATTTGAATGCCTATAAGAGTTTCCCTCCGCCAGAACCTAAGAAGGATAAGAAGAAGAAGGAAGAAACCAGTTCTGAGACCGTCGTCTTTGAAGATGCTTCAACAGGCACTGATCAGCCCGTAGTTAAGGTATGGGTGAAGGACGAAGGTATGCAGACTGATGATGAATGGCTAGGTGGCGATGACACCGTTTATGAAGAAGAAGAAGACAAGCCAAAAGTCCAGCGACGCCATAAGAAGAGAGGCTCGACAGCATCCAGAGTTACTGTCGCCGATCCTACTAATTTGGCAGCTGAAAGGTCT >BF_141I_N_ABN10939_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGTCTGGACGGAATAAGCCCCGCCCCGGCAGTCAATCACCTAAGGTGACGTTCAAACAAGAATCAGACGGTTCTGACTCCGAATCCGAACGCCGTAATGGTAACCGTTCTGGTGCCCGTCCTAAGAATAATAATAACAGAGGTGGTAATTCCAAGCCTGAGAAACCTAAGGCAGCCCCTCCGCAGAATGTTTCTTGGTTTGCTCCCCTTGTCCAAACGGGAAAGCAAGATCTGCGTTTCCCACGTGGAGAAGGAGTGCCCATAAGTCAAGGTGTAGACCCTGTCTATCTCCATGGCTACTGGGTGCGTACACAGCGCAATTTCCAAAAAGGTGGCAAAACTGTGCAGGCTAACCCCCGCTGGTACTTCTATTATACTGGTACCGGCCGTCATGCGGACCTCCGCTGGGGACAGAAGAACCCAGATTTGATTTGGGTTGGTGAAGATGGTGCCAATATAAACCGCATTGGTGATATGGGCACGCGTAATCCAAATAATGACTCTGCTATCCCAGTACAATTTGGCAGTGGCATTCCCAAGGGCTTTTATGCTGAAGGTCGCAACTCACGTGGCAATAGCCGCAACAGTTCGCGTAATTCCAGCAGGGCTTCCACGCGTGGAAACTCCAGAGCTAATTCAAGAGGTGCTTCTCCTGGCAGAAACACACCTAGTGGTGGTTCAAACTCTGAACCCTGGATGGCCTATCTGGTGCAGAAGTTGGAAGCACTGGAAACTAAGGTCAATGGCAATAAGTCAGAAACCAAAGCACCAGTGCAAGTCACCAAGAATGCTGCAGCTGAGAATGCCAAGAAGCTCAGGCATAAGAGAACACCTCATAAGGGCAGTGGTGTAACGGCCAACTTCGGCAGACGAGGACCTGGTGAATTAGAGGGTAATTTTGGGGATCTAGAAATGCTGAAACTAGGTGCAGACGACCCTAGGTTTCCTGCCGTTGCGCAAATGGCCCCTAATGTAGCTGCATTCATGTTCATGTCACACTTTAGCACTCGTGACGAAGAAGACGCACTTTGGCTCAACTATAGAGGAGCTATCAAGTTGCCTAAGTCAGATCCCAATTTTGAGCAATGGACTAAGTTGCTCGAGGAGAACTTGAATGCATACAAAACATTCCCTCCACCAGCGCCCAAGAAAGATAAGAAGAAGAAGGAAGAAGCCAGTCAGGAGATTGCCATCTTTGAGGATGCTTCCACCGGTACTGACCAACAGATCGTGAAAGTGTGGGTCAAAGATGAAGGTGCTCAGACTGACGAAGAATGGTTAGGCGGAGATGACACCGTCTATGAAGAAGAAGATGACAGACCTAAGACTCAGAGGAGACACAAGAAGAGGAATTCAACAGCGTCACGTGTGACGATTGCTGATCCTATGAATGCAACATCTGAAAGGTCC >BF_493I_N_ABN10931_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGTCTGGACGGAATAAGCCCCGCCCTACTTCTCAA---CCAAAGGTTACGTTCAAGCAAGAATCTGACGGTTCTGACTCCGAATCTGAACGCCGTAATGGTAACCGTTCTGGTGCCCGTTCTAAAAATAATAATGGACGAGGTGGTGCTCCCAAGCCTGAAAAGCCTAAGGCTGCCCCTCCACAGAATGTTTCCTGGTTTGCCCCGTTGGTTCAGACAGGAAAGCAAGACTTGCGCTTTCCTAGGGGACAGGGTGTGCCCATAAGTCAGGGTGTTGACCCTATTTATAATCATGGTTACTGGGTGAGAACTCAGCGCACTTTTCAGAAGGGTGGAAAACCAGTTTCAGCCAACCCTAGATGGTACTTTTACTATACAGGCACAGGTCGTTATGGCGACATGCGCTATGGTACCAAAAATCCAGACATATACTGGGTGGGTGAAGAAGGTGCTAATGTCAACCGTGTAGGTGACATGGGCACTCGTAATCCTAATAATGATGCTGCAATTTCAGTGCAGCTTGCAGATGGCATTCCCAAGGGTTTCTATGCAGAGGGTCGTAACTCACGCGGCAATAGTCGTAATAGTTCACGTAACTCTAGCAGAGCCTCCTCACGTGGTGGTTCGAGACCCGGTTCCAGAGGTGCTTCACCAGGTAGAGCCACTCCTAGT---GGTTCAGGTGCTGAACCATGGATGGCCTACCTAGTTAGTAAATTGGAGACACTGGAAGCTAAGGTTAATGGCACTAAGTCAGAAACCAAAGCACCAGTTCAGGTGACCAAGAGTGCAGCTGCCGAGAATGCCAAGAAACTCAGGCATAAGCGCACACCTCACAAGGGTAGCGGTGTTACCATGAATTACGGCAGAAGAGGTCCTGGTGATTTAGAGGGCAATTTTGGTGATCAGACTATGTTGAAACTTGGAGTTGATGATCCAAGGTTCCCTGCCGTTGCGCAAATGGCACCTAATGTAGCATCCTTTATTTTCATGTCGCACTTGTCTACACGGGAAGAAAATGATGCCTTATGGCTTCAGTATAAGGGCGCTATTAAGTTGCCTAAGGATGATCCCAATTATGAGCAGTGGACTAAGTTGCTGGCAGAAAATTTGAATGCCTACAAGGATTTCCCCCCACCAGAACCAAAGAAAGATAAGAAGAAGAAGGAAGAAATCAGTTCTGACACGGTTGTCTTTGAAGATGCCTCTACAGGCACGGATCAGGCTGTTGTTAAAGTCTGGGTTAAGGATGAAGGTGCGCAGACTGATGATGAATGGCTAGGCGGCGATGACACCGTCTACGAAGAAGAAGATGACAGACCTAAGACTCAGAGGAGACACAAGAAGAGGAATTCAACTGCGTCACGTGTGACGATAGCTGATCCTATGAATGCTACATCTGAAAGGTCC >HKU9_1_BF_005I_N_YP_001039975_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGTCTGGAAGGAACAGATCTAGATCTGGTACACCTTCCCCTAAGGTCACGTTCAAACAAGAATCTGACGGTTCTGACTCCGAATCTGAGCGCCGTAATGGTAACCGTAATGGTGCCCGCCCTAAAAATAATAATAGTAGAGGTAGTGCTCCCAAGCCTGAGAAGCCTAAGGCGGCCCCTCCTCAGAATGTTTCCTGGTTTGCACCGTTGGTTCAAACCGGTAAAGCTGAGTTGCGTTTCCCTAGAGGTGAAGGAGTGCCCGTGAGCCAAGGTGTTGATTCCACTTACGAGCACGGGTACTGGCTGCGTACACAGAGGTCTTTCCAGAAAGGTGGTAAGCAAGTTTTGGCTAACCCCCGCTGGTACTTCTATTATACTGGCACTGGTCGCTTTGGTGACCTTCGTTTTGGGACTAAGAACCCGGACATAGTCTGGGTTGGCCAAGAAGGTGCTAATATCAACCGTCTCGGTGATATGGGCACACGTAACCCCAGTAATGATGGTGCTATACCAGTGCAATTAGCTGGTGGCATACCTAAGGGCTTCTATGCTGAGGGGCGTGGCTCCCGTGGTAATAGCCGCAGTAGTTCACGCAACTCAAGCAGAGCATCATCGCGTGGTAACTCACGTGCTAGCTCCCGTGGTGCATCACCCGGTAGA------CCTGCTGCTAACCCGTCCACTGAGCCGTGGATGGCTTATCTTGTACAGAAGTTGGAAAGACTGGAGAGTCAGGTTAGTGGTACTAAGCCAGCTACCAAGAACCCAGTTCAAGTTACTAAGAATGAGGCTGCCGCCAATGCTAAGAAGCTCAGGCATAAACGCACTGCGCATAAGGGCAGTGGTGTTACTGTGAATTACGGCAGACGTGGCCCAGGTGATCTGGAGGGTAATTTTGGGGATCGTGAAATGATCAAACTTGGTACTGATGATCCCAGGTTTGCTGCCGCTGCGCAAATGGCCCCTAATGTTTCATCTTTTCTGTTTATGTCTCATTTATCCACGAGGGATGAAGATGATGCTCTGTGGCTCCATTATAAAGGTGCCATAAAGCTTCCTAAAGATGATCCCAACTATGAGCAGTGGACTAAGATTTTGGCAGAAAACTTGAACGCCTACAAAGATTTCCCTCCTACTGAGCCCAAAAAGGATAAAAAGAAGAAGGAAGAGACCGCCCAAGACACTGTCATCTTTGAAGATGCGTCTACTGGAACAGACCAAACAGTTGTTAAGGTCTGGGTAAAAGATCAGGACGCACAAACTGATGATGAGTGGCTGGGTGGTGATGAAACCGTTTATGAAGATGAGGACGACCGTCCAAAGACCCAGAGGAGACACAAGAAGAGAGGATCAACTGCCTCTCGTGTGACTATTGCGGACCCTACTAATGCAGGTGCCGAAAGATCT >UNKNOWN_HM211098_N_ADM33562_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGTCTGGACGGAATAAGCCCCGCCCTACTTCTCAA---CCAAAGGTTACGTTCAAGCAAGAATCTGACGGTTCTGACTCCGAATCCGAACGCCGTAATGGTAACCGTTCTGGTGCCCGTTCTAAAAATAATAATGGACGAGGTGGTGCTCCCAAGCCTGAAAAGCCTAAGGCTGCCCCTCCGCAGAATGTTTCCTGGTTTGCCCCGTTGGTTCAGACAGGAAAGCAAGACTTGCGCTTTCCTAGGGGACAGGGTGTGCCCATAAGTCAGGGTGTTGACCCTATTTATAATCATGGTTACTGGGTGAGAACTCAGCGCACTTTTCAGAAGGGTGGAAAACCAGTTTCAGCCAACCCTAGATGGTACTTTTACTATACAGGCACAGGTCGTTATGGCGACATGCGCTATGGTACCAAAAATCCAGACATATACTGGGTGGGTGAAGAAGGTGCTAATGTCAACCGTGTAGGTGACATGGGCACTCGTAATCCTAATAATGATGCTGCAATTTCAGTGCAGCTTGCAGATGGCATTCCCAAGGGTTTCTATGCAGAGGGTCGTAACTCACGCGGCAATAGTCGTAATAGTTCACGTAACTCTAGCAGAGCCTCCTCACGTGGTGGTTCGAGACCCGGTTCCAGAGGTGCTTCACCAGGTAGAGCCACTCCTAGT---GGTTCAGGTGTTGAACCATGGATGGCCTACCTAGTTAGTAAATTGGAGACACTGGAAGCTAAGGTTAATGGCACTAAGTCAGAAACCAAAGCACCAGTTCAGGTGACCAAGAGTGCAGCTGCCGAGAATGCCAAGAAACTCAGGCATAAGCGCACACCTCACAAGGGTAGCGGTGTTACCATGAATTACGGCAGAAGAGGTCCTGGTGATTTAGAGGGCAATTTTGGTGATCAGACTATGTTGAAACTTGGAGTTGATGATCCAAGGTTCCCTGCCGTTGCGCAAATGGCACCTAATGTAGCATCCTTTATTTTCATGTCGCACTTGTCTACACGGGAAGAAAATGATGCCTTATGGCTTCAGTATAAGGGCGCTATTAAGTTGCCTAAGGATGATCCCAATTATGAGCAGTGGACTAAGTTGCTGGCAGAAAATTTGAATGCCTACAAGGATTTCCCCCCACCAGAACCAAAGAAAGATAAGAAGAAGAAGGAAGAAATCAGTTCTGACACGGTTGTCTTTGAAGATGCCTCTACAGGCACGGATCAGGCTGTTGTTAAAGTCTGGGTTAAGGATGAAGGTGCGCAGACTGATGATGAATGGCTAGGCGGCGATGACACCGTCTACGAAGAAGAAGATGACAGACCTAAGACTCAGAGGAGACACAAGAAGAGGAATTCAACTGCGTCACGTGTGACGATAGCTGATCCTATGAATGCTACATCTGAAAGGTCC >Rousettus_spp_Jinghong_2009_NA_AVP25410_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGTCTGGACGGAATAAGCCCCGCCCAAGCAATCAA---GCCAAGGTTACGTTCAAACAAGAATCTGATAATTCTGACTCCGAATCTGAACGCCGTAATGGTAACCGTTCTGGTGCCCGTCCTAAAAATAATAATAACAGAGGTGCTAATCCCAAGCCTGAAAAGCCTAAGGCAGCCCCTCCGCAGAATGTTTCTTGGTTTGCTCCTCTTGTCCAAACGGGAAAGCAAGATTTGCGTTTCCCACGTGGAGAAGGAGTTCCGATAAGTCAAGGTGTGGACCTAAATTACCTTCATGGTTATTGGGTTCGCACGCAGCGCAGCTACCAAAAGGGTGGTAAGACTGTGCAGGCTAATGCTCGCTGGTACTTTTATTATACAGGTACTGGACGCTTTGGTGACCTCCGTTGGGGGCAGAAGAACCCAGAAATTATCTGGGTGGGTGAAGAAGGTGCCAATGTCAACCGTGTAGGTGATATGGGCACACGTAATCCCAATAATGATGCCGCGATTCCAGTTCAGCTGAGTGGCGGAATTCCTAAGGGCTTCTATGCAGAAGGGCGTAACTCACGTGGCAATAGCCGCAATGGTTCACGCAATTCGAGCAGAGCATCCTCTCGTGGAAGCTCGAGAGCCAGTTCCAGAGGTGCGTCTCCCGGGCGGAACACACCAAGTGGTGGTTCTAATTCTGAACCATGGATGGCCTATTTGGTCCAAAAACTTGAAGCGCTGGAAACTAAGGTTAATGGCAATAAGTCAGAAACCAAGACTCCTGTGCAAGTGTCCAAGAATGCTGCGGCTGAAAATGCCAAGAGACTACGGCACAAGCGTACACCTCATAAAGGCAGTGGTGTTACCGTTAATTATGGCAGAAGAGGCCCAGGTGATTGGGAAGGCAATTTGGGCGATCAGACTATTCTGAAACTTGGTACGGATGATCCCAGGTTTCCTGTCGCTGCGCAGATGGCCCCCAATGTAGCTTCGTTCCTATTCATGTCCCATTTCTCTACTAGAGATGAAGATGAGGCGCTTTGGCTCCAATATAAGGGTGCCATTAAGCTGCCGAAGGCTGACCCAAATTATGAGCAGTGGGTCAAGTTTTTGGACGAGAATTTGAACGCCTACAAAAATTTCCCTCCACCTGAGCCCAAGAAAGATAAGAAGAAGAAGGAAGAAGTCAGTCAAGAGATAATTGTCCATGAGGATGCATCCACTGGTACTGACCAGCCCATAGTTAAAGTGTGGGTTAAGGATGAAGGTGCTCAGACTGACGATGAATGGCTAGGCGGTGATGACACCGTCTATGAAGAAGAAGAAGACAAGCCGAAAGTTCAGCGTCGCCATAAGAAGCGAGGTTCTACGGCGTCTAGAGTGACTGTCGCTGATCCTACTAATGTGGCTGCTGAAAGGTCA >UNKNOWN_HM211099_N_ADM33570_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGTCTGGACGGAATAAGCCCCGCCCTGGCAGTCAATCACCTAAGGTGACGTTCAAACAAGAATCTGACGGTTCTGACTCCGAATCGGAACGCCGTAATGGTAACCGTAATGGTGCCCGTCCTAAAAATAATAATGGTAGAGGTGCTGGCTCCAAGCCTGAGAAACCTAAAGCAGCCCCTCCGCAGAATGTTTCTTGGTATGCGCCGCTTGTTCAAACGGGGAAGAATGATTTACGCTTCCCACGAGGACAAGGAGTGCCTATTAGCCAAGGTATAGATGACATCTATAACCACGGTTATTGGGTTCGCACTCAGCGCAATTTTCAGAAGGGTGGCAAACAAGTTGCTGCTAATCCCAGGTGGTATTTTTATTATACAGGCACGGGTCGCTATGCAGACCTACGCTATGGTTCTAAGAACCCAGATATCATATGGGTTGGTGCTGAAGGTGCCAATATTAACCGTGTTGGTGATATAGGCACGCGTAATCCCAGTAATGATGCTGCGATACCAGTACAGCTTGCAGATGGTATCCCTAAGGGTTTTTACGCAGAGGGCCGCAATTCACGTGGCAATAGTCGTAATAACTCGCGGAGTTCTAGCAGGGCCTCTTCTAGAGGTAGTTCTAGAGCTAGTTCTAGAGGGCCATCTCCTGGTAGAGCCACACCATCT---GGTGGCAATTCAGAACCATGGATGGCTTATTTAGTTCAAAAGCTTGAGGCGCTGGAAACCAAAGTTAATGGTAATAAGCCAGCCACTAAAGCTCCAGTTCAAGTATCTAAGAACGCTGCCTCTGAGAATGCTAAGAAACTCAGGCATAAGAGGACACCCCATAAGGGCAGTGGTGTTACCATGAATTTTGGACGGCGAGGTCCTGGTGATTTAGAGGGCAATTTTGGTGATCAGACTATGTTGAAACTTGGCACCGATGATCCCAGGTTTCCTGCCGCTGCGCAAATGGCACCTAATACGGCAGCATTTCTCTTCATGTCTCATTTTTCCACTAGGGAAGAAGGTGATGCCCTCTGGCTAAATTACAAAGGTGCTATCAAGCTTCCCAAGGATGACCCTAATTACAATCAGTGGGTTAAAATTTTGGAAGAGAACTTGAATGCCTATAAGAGTTTCCCTCCGCCAGAACCGAAGAAGGAAAAAAAGAAGAAGGAAGAAACCAGTTCTGAGACCGTCGTCTTTGAAGATGCTTCAACAGGTACTGATCAGCCCGTAGTTAAGGTATGGGTGAAGGACGAAGGTATGCAGACTGATGATGAATGGCTAGGTGGCGATGACACCGTTTATGAAGAAGAAGAAGACAAGCCAAAAGTCCAGCGACGCCATAAGAAGAGAGGCTCGACAGCATCCAGAGTTACTGTCGCCGATCCCACCAATTTGGCAGCTGAAAGGTCT >UNKNOWN_HM211100_N_ADM33578_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGTCTGGACGGAATAAGCCCCGCCTTATTTTTCAA---CCAAAGGTTACGTTCAAGCAAGAATCTGACGGTTCTGACTCCGAATCTGAACGCCGTAATGGTAACCGTTCTGGTGCCCGTTCTAAAAATAATAATGGACGAGGTGGTGCTCCCAAGCCTGAAAAGCCTAAGGCTGCCCCTCCACAGAATGTTTCCTGGTTTGCCCCGTTGGTTCAGACAGGAAAGCAAGACTTGCGCTTTCCTAGGGGACAGGGTGTGCCCATAAGTCAGGGTGTTGACCCTATTTATAATCATGGTTACTGGGTGAGAACTCAGCGCACTTTTCAGAAGGGTGGAAAACCAGTTTCAGCCAACCCTAGATGGTACTTTTACTATACAGGCACAGGTCGTTATGGCGACATGCGCTATGGTACCAAAAATCCAGACATATACTGGGTGGGTGAAGAAGGTGCTAATGTCAACCGTGTAGGTGACATGGGCACTCGTAATCCTAATAATGATGCTGCAATTTCAGTGCAGCTTGCAGATGGCATTCCCAAGGGTTTCTATGCAGAGGGTCGTAACTCACGCGGCAATAGTCGTAATAGTTCACGTAACTCTAGCAGAGCCTCCTCACGTGGTGGTTCGAGACCCGGTTCCAGAGGTGCTTCACCAGGTAGAGCCACTCCTAGT---GGTTCAGGTGCTGAACCATGGATGGCCTACCTAGTTAGTAAATTGGAGACACTGGAAGCTAAGGTTAATGGCACTAAGTCAGAAACCAAAGCACCAGTTCAGGTGACCAAGAGTGCAGCTGCCGAGAATGCCAAGAAACTCAGGCATAAGCGCACACCTCACAAGGGTAGCGGTGTTACCATGAATTACGGCAGAAGAGGTCCTGGTGATTTAGAGGGCAATTTTGGTGATCAGACTATGTTGAAACTTGGAGTTGATGATCCAAGGTTCCCTGCCGTTGCGCAAATGGCACCTAATGTAGCATCCTTTATTTTCATGTCGCACTTGTCTACACGGGAAGAAAATGATGCCTTATGGCTTCAGTATAAGGGCGCTATTAAGTTGCCTAAGGATGATCCCAATTATGAGCAGTGGACTAAGTTGCTGGCAGAAAATTTGAATGCCTACAAGGATTTCCCCCCACCAGAACCAAAGAAAGATAAGAAGAAGAAGGAAGAAATCAGTTCTGACACGGTTGTCTTTGAAGATGCCTCTACAGGCACGGATCAGGCTGTTGTTAAAGTCTGGGTTAAGGATGAAGGTGCGCAGACTGATGATGAATGGCTAGGCGGCGATGACACCGTCTACGAAGAAGAAGATGACAGACCTAAGACTCAGAGGAGACACAAGAAGAGGAATTCAACTGCGTCACGTGTGACGATAGCTGATCCTATGAATGCTACATCTGAAAGGTCC >UNKNOWN_HM211101_N_ADM33586_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 ATGTCTGGACGGAATAAGCCCCGCCCTAGCAATCAA---CCTAAGGTGACGTTCAAACAGGAATCTGACGGTTCAGACTCCGAATCGGAACGCCGTAATGGTAACCGTAATGGTGCCCGTCCTAAGACTAATAATAATAGAGGTGCTGGCTCCAAGCCTGAGAAACCTAAAGCAGCCCCTCCTCAGAATGTTTCTTGGTATGCTCCCCTTGTCCAGACAGGAAAAGCAGATTTGCGATTCCCACGTGGAGAGGGTGTTCCCATAAGCCAGGGCGTGGATCCTATATATCAGCATGGTTATTGGACCCGCACACAGCGCAGTTTCCAAAAGGGTGGAAAAACTGTTCAGGCTAATCCTCGCTGGTACTTTTATTACACAGGTACCGGCCGCTATGCCGACCTCCGATGGGGTCAGAAGAACCCAGACATTGTTTGGGTTGGTGAAGAGGGTGCCAATATAAACCGCGTAGGTGATATGGGCACGCGTAATCCTAATAATGATGCTGCCATTGCCGTACAGCTTGGTAATGGCATACCTAAAGGGTTTTATGCAGAAGGCCGCGGCTCTCGTGGCAATAGCCGCAATAGTTCGCGTAATTCTAGCAGAGCTTCTTCTCGAAGTAGTTCTAGGCCCAATTCCAGAGGTGCGTCTCCAGGTAGAAATACACCTAATCCTGGTTCTGGCAGTGAACCATGGATGGCTTACTTAGTTAGTAAGTTGGAAAACTTGGAGGCTAAGGTTAATGGTACTAAACCAGAAACTAAGGCTCCAGTACAAGTTACCAAGAATGCTGCAGCTGAAAATGCAAAGAAACTCAGGCATAAGAGGACACCCCACAAGGGCAGTGGTGTTACCATGAATTTTGGACGGCGAGGTCCTGGTGATTTAGAGGGCAACTTTGGTGACCAAACTATGTTGAAACTTGGTACTGATGATCCCAGGTTTCCTGCCGCTGCGCAGATGGCACCTAATGTGGCTGCATTTCTCTTCATGTCACATTTTTCCACTAGGGAAGAGGGTGACGCCCTTTGGCTTAATTATAAGGGCGCCATTAAGCTTCCTAAGGATGACCCTAATTATAATCAGTGGGTCAAAGTACTTGAAGAGAATTTAAATGCCTACAAGGATTTCCCTCCTCCAGAGCCCAAGAAAGATAAGAAGAAGAAGGAAGAGGTCAGTGCTGAAACTGTAGTCTTTGAAGATGCCTCTACTGGCACAGACCAGCCTGTAGTTAAGGTCTGGGTTAAGGACGAAGGTATGCAAACTGACGATGAATGGTTAGGCGGTGATGATACCGTCTATGAAGATGAAGAAGATAAGCCTAAGACCCAGCGTAGACATAAGAAAAGGCACTCTACAGCGTCACGTGTGACGATTGCAGATCCTACAAATGTTAATTCAGAAAGGTCG
>BF_005I_N_ABN10915_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNRSRSGTPSPKVTFKQESDGSDSESERRNGNRNGARPKNNNSRGSAPKPEKPKAAPPQNVSWFAPLVQTGKAELRFPRGEGVPVSQGVDSTYEHGYWLRTQRSFQKGGKQVLANPRWYFYYTGTGRFGDLRFGTKNPDIVWVGQEGANINRLGDMGTRNPSNDGAIPVQLAGGIPKGFYAEGRGSRGNSRSSSRNSSRASSRGNSRASSRGASPGR--PAANPSTEPWMAYLVQKLERLESQVSGTKPATKNPVQVTKNEAAANAKKLRHKRTAHKGSGVTVNYGRRGPGDLEGNFGDREMIKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTRDEDDALWLHYKGAIKLPKDDPNYEQWTKILAENLNAYKDFPPTEPKKDKKKKEETAQDTVIFEDASTGTDQTVVKVWVKDQDAQTDDEWLGGDETVYEDEDDRPKTQRRHKKRGSTASRVTIADPTNAGAERS >BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPGNQSPKVTFKQESDGSDSESERRNGNRNGARPKNNNNRGFGSKPEKPKAAPPQNVSWYAPLVQTGKADLRFPRGEGVPISQGVDPIYQHGYWTRTQRSFQKGGKTVQANPRWYFYYTGTGRYADLRWGQKNPDIVWVGEEGANINRVGDMGTRNPNNDAAIAVQLGNGIPKGFYAEGRGSRGNSRNSSRNSSRASSRSSSRPNSRGASPGRNTPNPGAGSEPWMAYLVSKLENLEAKVNGTKPETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNFGDQTMLKLGTDDPRFPAAAQMAPNTAAFLFMSHFSTREEGDALWLNYKGAIKLPKDDPNYNQWVKILEENLNAYKSFPPPEPKKDKKKKEETSSETVVFEDASTGTDQPVVKVWVKDEGMQTDDEWLGGDDTVYEEEEDKPKVQRRHKKRGSTASRVTVADPTNLAAERS >BF_141I_N_ABN10939_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPGSQSPKVTFKQESDGSDSESERRNGNRSGARPKNNNNRGGNSKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGEGVPISQGVDPVYLHGYWVRTQRNFQKGGKTVQANPRWYFYYTGTGRHADLRWGQKNPDLIWVGEDGANINRIGDMGTRNPNNDSAIPVQFGSGIPKGFYAEGRNSRGNSRNSSRNSSRASTRGNSRANSRGASPGRNTPSGGSNSEPWMAYLVQKLEALETKVNGNKSETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTANFGRRGPGELEGNFGDLEMLKLGADDPRFPAVAQMAPNVAAFMFMSHFSTRDEEDALWLNYRGAIKLPKSDPNFEQWTKLLEENLNAYKTFPPPAPKKDKKKKEEASQEIAIFEDASTGTDQQIVKVWVKDEGAQTDEEWLGGDDTVYEEEDDRPKTQRRHKKRNSTASRVTIADPMNATSERS >BF_493I_N_ABN10931_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPTSQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGAPKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGYWVRTQRTFQKGGKPVSANPRWYFYYTGTGRYGDMRYGTKNPDIYWVGEEGANVNRVGDMGTRNPNNDAAISVQLADGIPKGFYAEGRNSRGNSRNSSRNSSRASSRGGSRPGSRGASPGRATPS-GSGAEPWMAYLVSKLETLEAKVNGTKSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNFGDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGAIKLPKDDPNYEQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFEDASTGTDQAVVKVWVKDEGAQTDDEWLGGDDTVYEEEDDRPKTQRRHKKRNSTASRVTIADPMNATSERS >HKU9_1_BF_005I_N_YP_001039975_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNRSRSGTPSPKVTFKQESDGSDSESERRNGNRNGARPKNNNSRGSAPKPEKPKAAPPQNVSWFAPLVQTGKAELRFPRGEGVPVSQGVDSTYEHGYWLRTQRSFQKGGKQVLANPRWYFYYTGTGRFGDLRFGTKNPDIVWVGQEGANINRLGDMGTRNPSNDGAIPVQLAGGIPKGFYAEGRGSRGNSRSSSRNSSRASSRGNSRASSRGASPGR--PAANPSTEPWMAYLVQKLERLESQVSGTKPATKNPVQVTKNEAAANAKKLRHKRTAHKGSGVTVNYGRRGPGDLEGNFGDREMIKLGTDDPRFAAAAQMAPNVSSFLFMSHLSTRDEDDALWLHYKGAIKLPKDDPNYEQWTKILAENLNAYKDFPPTEPKKDKKKKEETAQDTVIFEDASTGTDQTVVKVWVKDQDAQTDDEWLGGDETVYEDEDDRPKTQRRHKKRGSTASRVTIADPTNAGAERS >UNKNOWN_HM211098_N_ADM33562_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPTSQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGAPKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGYWVRTQRTFQKGGKPVSANPRWYFYYTGTGRYGDMRYGTKNPDIYWVGEEGANVNRVGDMGTRNPNNDAAISVQLADGIPKGFYAEGRNSRGNSRNSSRNSSRASSRGGSRPGSRGASPGRATPS-GSGVEPWMAYLVSKLETLEAKVNGTKSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNFGDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGAIKLPKDDPNYEQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFEDASTGTDQAVVKVWVKDEGAQTDDEWLGGDDTVYEEEDDRPKTQRRHKKRNSTASRVTIADPMNATSERS >Rousettus_spp_Jinghong_2009_NA_AVP25410_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPSNQ-AKVTFKQESDNSDSESERRNGNRSGARPKNNNNRGANPKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGEGVPISQGVDLNYLHGYWVRTQRSYQKGGKTVQANARWYFYYTGTGRFGDLRWGQKNPEIIWVGEEGANVNRVGDMGTRNPNNDAAIPVQLSGGIPKGFYAEGRNSRGNSRNGSRNSSRASSRGSSRASSRGASPGRNTPSGGSNSEPWMAYLVQKLEALETKVNGNKSETKTPVQVSKNAAAENAKRLRHKRTPHKGSGVTVNYGRRGPGDWEGNLGDQTILKLGTDDPRFPVAAQMAPNVASFLFMSHFSTRDEDEALWLQYKGAIKLPKADPNYEQWVKFLDENLNAYKNFPPPEPKKDKKKKEEVSQEIIVHEDASTGTDQPIVKVWVKDEGAQTDDEWLGGDDTVYEEEEDKPKVQRRHKKRGSTASRVTVADPTNVAAERS >UNKNOWN_HM211099_N_ADM33570_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPGSQSPKVTFKQESDGSDSESERRNGNRNGARPKNNNGRGAGSKPEKPKAAPPQNVSWYAPLVQTGKNDLRFPRGQGVPISQGIDDIYNHGYWVRTQRNFQKGGKQVAANPRWYFYYTGTGRYADLRYGSKNPDIIWVGAEGANINRVGDIGTRNPSNDAAIPVQLADGIPKGFYAEGRNSRGNSRNNSRSSSRASSRGSSRASSRGPSPGRATPS-GGNSEPWMAYLVQKLEALETKVNGNKPATKAPVQVSKNAASENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNFGDQTMLKLGTDDPRFPAAAQMAPNTAAFLFMSHFSTREEGDALWLNYKGAIKLPKDDPNYNQWVKILEENLNAYKSFPPPEPKKEKKKKEETSSETVVFEDASTGTDQPVVKVWVKDEGMQTDDEWLGGDDTVYEEEEDKPKVQRRHKKRGSTASRVTVADPTNLAAERS >UNKNOWN_HM211100_N_ADM33578_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRLIFQ-PKVTFKQESDGSDSESERRNGNRSGARSKNNNGRGGAPKPEKPKAAPPQNVSWFAPLVQTGKQDLRFPRGQGVPISQGVDPIYNHGYWVRTQRTFQKGGKPVSANPRWYFYYTGTGRYGDMRYGTKNPDIYWVGEEGANVNRVGDMGTRNPNNDAAISVQLADGIPKGFYAEGRNSRGNSRNSSRNSSRASSRGGSRPGSRGASPGRATPS-GSGAEPWMAYLVSKLETLEAKVNGTKSETKAPVQVTKSAAAENAKKLRHKRTPHKGSGVTMNYGRRGPGDLEGNFGDQTMLKLGVDDPRFPAVAQMAPNVASFIFMSHLSTREENDALWLQYKGAIKLPKDDPNYEQWTKLLAENLNAYKDFPPPEPKKDKKKKEEISSDTVVFEDASTGTDQAVVKVWVKDEGAQTDDEWLGGDDTVYEEEDDRPKTQRRHKKRNSTASRVTIADPMNATSERS >UNKNOWN_HM211101_N_ADM33586_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9 MSGRNKPRPSNQ-PKVTFKQESDGSDSESERRNGNRNGARPKTNNNRGAGSKPEKPKAAPPQNVSWYAPLVQTGKADLRFPRGEGVPISQGVDPIYQHGYWTRTQRSFQKGGKTVQANPRWYFYYTGTGRYADLRWGQKNPDIVWVGEEGANINRVGDMGTRNPNNDAAIAVQLGNGIPKGFYAEGRGSRGNSRNSSRNSSRASSRSSSRPNSRGASPGRNTPNPGSGSEPWMAYLVSKLENLEAKVNGTKPETKAPVQVTKNAAAENAKKLRHKRTPHKGSGVTMNFGRRGPGDLEGNFGDQTMLKLGTDDPRFPAAAQMAPNVAAFLFMSHFSTREEGDALWLNYKGAIKLPKDDPNYNQWVKVLEENLNAYKDFPPPEPKKDKKKKEEVSAETVVFEDASTGTDQPVVKVWVKDEGMQTDDEWLGGDDTVYEDEEDKPKTQRRHKKRHSTASRVTIADPTNVNSERS
Reading sequence file /data//pss_subsets/BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result/original_alignment/codeml/fasta/BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result.1
Found 10 sequences of length 1410
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 19.5%
Found 476 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0% 37.6% 66.4% 86.4% 97.5%100.0%
Using a window size of 80 with k as 27
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 385 polymorphic sites
**p-Value(s)**
----------
NSS: 0.00e+00 (1000 permutations)
Max Chi^2: 0.00e+00 (1000 permutations)
PHI (Permutation): 0.00e+00 (1000 permutations)
PHI (Normal): 0.00e+00
#NEXUS
[ID: 5091284458]
begin taxa;
dimensions ntax=10;
taxlabels
BF_005I_N_ABN10915_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9
UNKNOWN_HM211101_N_ADM33586_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9
BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9
BF_141I_N_ABN10939_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9
BF_493I_N_ABN10931_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9
HKU9_1_BF_005I_N_YP_001039975_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9
UNKNOWN_HM211098_N_ADM33562_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9
Rousettus_spp_Jinghong_2009_NA_AVP25410_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9
UNKNOWN_HM211099_N_ADM33570_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9
UNKNOWN_HM211100_N_ADM33578_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9
;
end;
begin trees;
translate
1 BF_005I_N_ABN10915_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9,
2 UNKNOWN_HM211101_N_ADM33586_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9,
3 BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9,
4 BF_141I_N_ABN10939_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9,
5 BF_493I_N_ABN10931_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9,
6 HKU9_1_BF_005I_N_YP_001039975_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9,
7 UNKNOWN_HM211098_N_ADM33562_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9,
8 Rousettus_spp_Jinghong_2009_NA_AVP25410_1_2009_11_01_China_Bat_Rousettus_bat_coronavirus_HKU9,
9 UNKNOWN_HM211099_N_ADM33570_1_2005_12_11_China_Bat_Rousettus_bat_coronavirus_HKU9,
10 UNKNOWN_HM211100_N_ADM33578_1_2006_04_10_China_Bat_Rousettus_bat_coronavirus_HKU9
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:6.731627e-04,6:7.011576e-04,(((2:7.273081e-02,(3:4.632396e-03,9:2.643885e-01)0.939:6.777070e-02)1.000:1.635383e-01,(4:2.596705e-01,8:2.662558e-01)0.714:5.657753e-02)1.000:1.134396e-01,((5:6.848470e-04,10:3.376007e-03)0.543:2.034827e-03,7:2.827792e-03)1.000:2.168044e-01)1.000:5.688830e-01);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:6.731627e-04,6:7.011576e-04,(((2:7.273081e-02,(3:4.632396e-03,9:2.643885e-01):6.777070e-02):1.635383e-01,(4:2.596705e-01,8:2.662558e-01):5.657753e-02):1.134396e-01,((5:6.848470e-04,10:3.376007e-03):2.034827e-03,7:2.827792e-03):2.168044e-01):5.688830e-01);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -6276.35 -6296.38
2 -6276.34 -6293.30
--------------------------------------
TOTAL -6276.35 -6295.73
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 2.089780 0.020731 1.818225 2.367343 2.081064 1340.58 1397.75 1.000
r(A<->C){all} 0.109987 0.000278 0.078242 0.142996 0.109670 1061.54 1077.18 1.001
r(A<->G){all} 0.261211 0.000563 0.215310 0.307031 0.260457 553.14 640.48 1.000
r(A<->T){all} 0.127603 0.000272 0.096125 0.160983 0.127066 974.31 1029.25 1.000
r(C<->G){all} 0.030848 0.000099 0.011941 0.049527 0.030379 787.44 802.93 1.000
r(C<->T){all} 0.407937 0.000818 0.352708 0.465509 0.407018 654.65 756.02 1.000
r(G<->T){all} 0.062415 0.000142 0.039242 0.085816 0.061586 1109.19 1170.41 1.000
pi(A){all} 0.280376 0.000095 0.261933 0.299204 0.280218 871.60 923.05 1.000
pi(C){all} 0.219858 0.000088 0.201613 0.237612 0.219788 899.59 935.53 1.000
pi(G){all} 0.259661 0.000101 0.239477 0.278902 0.259617 878.38 962.41 1.000
pi(T){all} 0.240105 0.000082 0.221939 0.257565 0.239993 1023.54 1137.57 1.000
alpha{1,2} 0.174700 0.000222 0.146737 0.204389 0.173718 1265.72 1343.29 1.000
alpha{3} 4.160105 1.660198 2.145937 6.819313 3.950485 1406.72 1453.86 1.000
pinvar{all} 0.167023 0.001074 0.101724 0.230538 0.167677 1269.25 1346.79 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/BF_017I_N_ABN10923_1_NA_China_Bat_Rousettus_bat_coronavirus_HKU9.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 10 ls = 466
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 8 9 8 7 8 7 | Ser TCT 12 12 8 12 12 11 | Tyr TAT 7 10 7 7 7 7 | Cys TGT 0 0 0 0 0 0
TTC 6 5 8 5 6 5 | TCC 7 6 8 6 7 7 | TAC 5 3 3 8 5 8 | TGC 0 0 0 0 0 0
Leu TTA 2 2 2 2 2 2 | TCA 7 1 9 10 7 10 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 6 7 5 8 6 8 | TCG 1 3 1 2 1 2 | TAG 0 0 0 0 0 0 | Trp TGG 9 10 10 9 9 9
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 4 6 2 3 4 3 | Pro CCT 15 22 17 16 15 16 | His CAT 4 5 4 2 4 2 | Arg CGT 16 7 13 11 16 11
CTC 3 3 5 1 3 1 | CCC 8 6 9 7 8 7 | CAC 2 0 2 3 2 3 | CGC 7 10 8 7 7 7
CTA 0 1 2 2 0 2 | CCA 5 6 7 11 5 10 | Gln CAA 11 5 11 4 11 4 | CGA 0 4 1 1 0 1
CTG 6 0 4 2 6 2 | CCG 4 2 1 1 4 2 | CAG 8 13 9 14 8 14 | CGG 0 3 1 2 0 2
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 5 5 2 5 | Thr ACT 18 10 8 10 18 10 | Asn AAT 15 32 25 25 15 25 | Ser AGT 8 8 7 7 8 7
ATC 3 2 4 1 3 1 | ACC 5 7 5 5 5 5 | AAC 13 4 12 5 13 5 | AGC 4 4 3 2 4 2
ATA 4 4 2 3 4 3 | ACA 5 6 5 8 5 8 | Lys AAA 12 12 10 9 12 9 | Arg AGA 11 7 9 10 11 10
Met ATG 6 8 8 9 6 9 | ACG 2 3 6 4 2 4 | AAG 24 27 27 29 24 29 | AGG 6 5 6 6 6 6
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 13 13 3 15 13 16 | Ala GCT 16 15 14 12 16 11 | Asp GAT 20 18 12 19 20 19 | Gly GGT 29 27 20 29 29 29
GTC 4 5 6 4 4 4 | GCC 11 11 10 12 11 12 | GAC 10 7 13 10 10 10 | GGC 9 14 14 12 9 12
GTA 2 5 4 2 2 2 | GCA 6 9 9 8 6 8 | Glu GAA 13 23 23 22 13 22 | GGA 4 5 9 6 4 6
GTG 5 3 9 6 5 6 | GCG 5 1 4 3 5 3 | GAG 14 7 8 5 14 5 | GGG 4 1 1 0 4 0
--------------------------------------------------------------------------------------------------------------------------------------
------------------------------------------------------------------------------------------------------
Phe TTT 5 9 8 8 | Ser TCT 13 17 11 12 | Tyr TAT 9 11 7 9 | Cys TGT 0 0 0 0
TTC 7 4 5 5 | TCC 6 4 6 4 | TAC 4 3 8 4 | TGC 0 0 0 0
Leu TTA 0 3 2 4 | TCA 4 3 10 4 | *** TAA 0 0 0 0 | *** TGA 0 0 0 0
TTG 5 4 8 4 | TCG 3 3 2 3 | TAG 0 0 0 0 | Trp TGG 11 9 9 10
------------------------------------------------------------------------------------------------------
Leu CTT 5 5 4 7 | Pro CCT 12 14 15 22 | His CAT 5 4 2 4 | Arg CGT 13 7 11 9
CTC 2 3 1 3 | CCC 8 8 7 7 | CAC 1 1 3 2 | CGC 9 9 7 9
CTA 4 3 2 0 | CCA 9 10 11 7 | Gln CAA 10 9 4 5 | CGA 1 3 1 4
CTG 4 1 2 0 | CCG 4 4 1 0 | CAG 11 9 14 13 | CGG 3 3 2 2
------------------------------------------------------------------------------------------------------
Ile ATT 6 3 6 4 | Thr ACT 11 7 9 10 | Asn AAT 30 28 25 31 | Ser AGT 6 9 7 8
ATC 1 4 1 0 | ACC 3 7 5 6 | AAC 6 7 5 5 | AGC 5 2 2 4
ATA 3 4 3 4 | ACA 3 4 8 7 | Lys AAA 9 13 9 12 | Arg AGA 9 7 10 5
Met ATG 5 7 9 8 | ACG 5 5 4 3 | AAG 29 26 29 27 | AGG 2 7 6 7
------------------------------------------------------------------------------------------------------
Val GTT 11 14 15 12 | Ala GCT 13 14 12 13 | Asp GAT 16 18 19 17 | Gly GGT 23 28 29 25
GTC 9 4 4 6 | GCC 11 10 12 11 | GAC 9 8 10 10 | GGC 11 13 12 14
GTA 2 4 2 6 | GCA 4 9 8 8 | Glu GAA 25 21 22 20 | GGA 7 4 6 5
GTG 8 3 6 4 | GCG 7 4 3 3 | GAG 6 7 5 9 | GGG 3 2 0 1
------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C1
position 1: T:0.15021 C:0.19957 A:0.29614 G:0.35408
position 2: T:0.15880 C:0.27253 A:0.33906 G:0.22961
position 3: T:0.40129 C:0.20815 A:0.17597 G:0.21459
Average T:0.23677 C:0.22675 A:0.27039 G:0.26609
#2: C2
position 1: T:0.14592 C:0.19957 A:0.30258 G:0.35193
position 2: T:0.16094 C:0.25751 A:0.35622 G:0.22532
position 3: T:0.42060 C:0.18670 A:0.19313 G:0.19957
Average T:0.24249 C:0.21459 A:0.28398 G:0.25894
#3: C3
position 1: T:0.14807 C:0.20601 A:0.30472 G:0.34120
position 2: T:0.16524 C:0.25966 A:0.35622 G:0.21888
position 3: T:0.32833 C:0.23605 A:0.22103 G:0.21459
Average T:0.21388 C:0.23391 A:0.29399 G:0.25823
#4: C4
position 1: T:0.16309 C:0.18670 A:0.29614 G:0.35408
position 2: T:0.16094 C:0.27253 A:0.34764 G:0.21888
position 3: T:0.38627 C:0.18884 A:0.21030 G:0.21459
Average T:0.23677 C:0.21602 A:0.28469 G:0.26252
#5: C5
position 1: T:0.15021 C:0.19957 A:0.29614 G:0.35408
position 2: T:0.15880 C:0.27253 A:0.33906 G:0.22961
position 3: T:0.40129 C:0.20815 A:0.17597 G:0.21459
Average T:0.23677 C:0.22675 A:0.27039 G:0.26609
#6: C6
position 1: T:0.16309 C:0.18670 A:0.29614 G:0.35408
position 2: T:0.16309 C:0.27039 A:0.34764 G:0.21888
position 3: T:0.38412 C:0.19099 A:0.20815 G:0.21674
Average T:0.23677 C:0.21602 A:0.28398 G:0.26323
#7: C7
position 1: T:0.14378 C:0.21674 A:0.28541 G:0.35408
position 2: T:0.16524 C:0.24893 A:0.36481 G:0.22103
position 3: T:0.38197 C:0.19742 A:0.19313 G:0.22747
Average T:0.23033 C:0.22103 A:0.28112 G:0.26753
#8: C8
position 1: T:0.15021 C:0.19957 A:0.30043 G:0.34979
position 2: T:0.16094 C:0.26395 A:0.35408 G:0.22103
position 3: T:0.40343 C:0.18670 A:0.20815 G:0.20172
Average T:0.23820 C:0.21674 A:0.28755 G:0.25751
#9: C9
position 1: T:0.16309 C:0.18670 A:0.29614 G:0.35408
position 2: T:0.16738 C:0.26609 A:0.34764 G:0.21888
position 3: T:0.38627 C:0.18884 A:0.21030 G:0.21459
Average T:0.23891 C:0.21388 A:0.28469 G:0.26252
#10: C10
position 1: T:0.14378 C:0.20172 A:0.30258 G:0.35193
position 2: T:0.16094 C:0.25751 A:0.36052 G:0.22103
position 3: T:0.40987 C:0.19313 A:0.19528 G:0.20172
Average T:0.23820 C:0.21745 A:0.28612 G:0.25823
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 77 | Ser S TCT 120 | Tyr Y TAT 81 | Cys C TGT 0
TTC 56 | TCC 61 | TAC 51 | TGC 0
Leu L TTA 21 | TCA 65 | *** * TAA 0 | *** * TGA 0
TTG 61 | TCG 21 | TAG 0 | Trp W TGG 95
------------------------------------------------------------------------------
Leu L CTT 43 | Pro P CCT 164 | His H CAT 36 | Arg R CGT 114
CTC 25 | CCC 75 | CAC 19 | CGC 80
CTA 16 | CCA 81 | Gln Q CAA 74 | CGA 16
CTG 27 | CCG 23 | CAG 113 | CGG 18
------------------------------------------------------------------------------
Ile I ATT 40 | Thr T ACT 111 | Asn N AAT 251 | Ser S AGT 75
ATC 20 | ACC 53 | AAC 75 | AGC 32
ATA 34 | ACA 59 | Lys K AAA 107 | Arg R AGA 89
Met M ATG 75 | ACG 38 | AAG 271 | AGG 57
------------------------------------------------------------------------------
Val V GTT 125 | Ala A GCT 136 | Asp D GAT 178 | Gly G GGT 268
GTC 50 | GCC 111 | GAC 97 | GGC 120
GTA 31 | GCA 75 | Glu E GAA 204 | GGA 56
GTG 55 | GCG 38 | GAG 80 | GGG 16
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.15215 C:0.19828 A:0.29764 G:0.35193
position 2: T:0.16223 C:0.26416 A:0.35129 G:0.22232
position 3: T:0.39034 C:0.19850 A:0.19914 G:0.21202
Average T:0.23491 C:0.22031 A:0.28269 G:0.26209
Model 1: NearlyNeutral (2 categories)
TREE # 1: (1, 5, (((10, (2, 8)), (3, 7)), ((4, 9), 6))); MP score: 905
lnL(ntime: 17 np: 20): -5851.222331 +0.000000
11..1 11..5 11..12 12..13 13..14 14..10 14..15 15..2 15..8 13..16 16..3 16..7 12..17 17..18 18..4 18..9 17..6
0.000004 0.000004 1.120681 0.202552 0.350316 0.123164 0.174912 0.000322 0.520067 0.108176 0.460609 0.498805 0.352650 0.003703 0.000004 0.006674 0.002962 1.803649 0.868556 0.033047
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 3.925607
(1: 0.000004, 5: 0.000004, (((10: 0.123164, (2: 0.000322, 8: 0.520067): 0.174912): 0.350316, (3: 0.460609, 7: 0.498805): 0.108176): 0.202552, ((4: 0.000004, 9: 0.006674): 0.003703, 6: 0.002962): 0.352650): 1.120681);
(C1: 0.000004, C5: 0.000004, (((C10: 0.123164, (C2: 0.000322, C8: 0.520067): 0.174912): 0.350316, (C3: 0.460609, C7: 0.498805): 0.108176): 0.202552, ((C4: 0.000004, C9: 0.006674): 0.003703, C6: 0.002962): 0.352650): 1.120681);
Detailed output identifying parameters
kappa (ts/tv) = 1.80365
MLEs of dN/dS (w) for site classes (K=2)
p: 0.86856 0.13144
w: 0.03305 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
11..1 0.000 1067.0 331.0 0.1601 0.0000 0.0000 0.0 0.0
11..5 0.000 1067.0 331.0 0.1601 0.0000 0.0000 0.0 0.0
11..12 1.121 1067.0 331.0 0.1601 0.1666 1.0405 177.8 344.4
12..13 0.203 1067.0 331.0 0.1601 0.0301 0.1881 32.1 62.3
13..14 0.350 1067.0 331.0 0.1601 0.0521 0.3253 55.6 107.7
14..10 0.123 1067.0 331.0 0.1601 0.0183 0.1144 19.5 37.9
14..15 0.175 1067.0 331.0 0.1601 0.0260 0.1624 27.8 53.8
15..2 0.000 1067.0 331.0 0.1601 0.0000 0.0003 0.1 0.1
15..8 0.520 1067.0 331.0 0.1601 0.0773 0.4829 82.5 159.8
13..16 0.108 1067.0 331.0 0.1601 0.0161 0.1004 17.2 33.2
16..3 0.461 1067.0 331.0 0.1601 0.0685 0.4277 73.1 141.6
16..7 0.499 1067.0 331.0 0.1601 0.0742 0.4631 79.1 153.3
12..17 0.353 1067.0 331.0 0.1601 0.0524 0.3274 55.9 108.4
17..18 0.004 1067.0 331.0 0.1601 0.0006 0.0034 0.6 1.1
18..4 0.000 1067.0 331.0 0.1601 0.0000 0.0000 0.0 0.0
18..9 0.007 1067.0 331.0 0.1601 0.0010 0.0062 1.1 2.1
17..6 0.003 1067.0 331.0 0.1601 0.0004 0.0028 0.5 0.9
Time used: 0:50
Model 2: PositiveSelection (3 categories)
TREE # 1: (1, 5, (((10, (2, 8)), (3, 7)), ((4, 9), 6))); MP score: 905
lnL(ntime: 17 np: 22): -5851.222331 +0.000000
11..1 11..5 11..12 12..13 13..14 14..10 14..15 15..2 15..8 13..16 16..3 16..7 12..17 17..18 18..4 18..9 17..6
0.000004 0.000004 1.120681 0.202552 0.350316 0.123164 0.174912 0.000322 0.520067 0.108176 0.460609 0.498805 0.352650 0.003703 0.000004 0.006674 0.002962 1.803649 0.868556 0.064164 0.033047 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 3.925607
(1: 0.000004, 5: 0.000004, (((10: 0.123164, (2: 0.000322, 8: 0.520067): 0.174912): 0.350316, (3: 0.460609, 7: 0.498805): 0.108176): 0.202552, ((4: 0.000004, 9: 0.006674): 0.003703, 6: 0.002962): 0.352650): 1.120681);
(C1: 0.000004, C5: 0.000004, (((C10: 0.123164, (C2: 0.000322, C8: 0.520067): 0.174912): 0.350316, (C3: 0.460609, C7: 0.498805): 0.108176): 0.202552, ((C4: 0.000004, C9: 0.006674): 0.003703, C6: 0.002962): 0.352650): 1.120681);
Detailed output identifying parameters
kappa (ts/tv) = 1.80365
MLEs of dN/dS (w) for site classes (K=3)
p: 0.86856 0.06416 0.06728
w: 0.03305 1.00000 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
11..1 0.000 1067.0 331.0 0.1601 0.0000 0.0000 0.0 0.0
11..5 0.000 1067.0 331.0 0.1601 0.0000 0.0000 0.0 0.0
11..12 1.121 1067.0 331.0 0.1601 0.1666 1.0405 177.8 344.4
12..13 0.203 1067.0 331.0 0.1601 0.0301 0.1881 32.1 62.3
13..14 0.350 1067.0 331.0 0.1601 0.0521 0.3253 55.6 107.7
14..10 0.123 1067.0 331.0 0.1601 0.0183 0.1144 19.5 37.9
14..15 0.175 1067.0 331.0 0.1601 0.0260 0.1624 27.8 53.8
15..2 0.000 1067.0 331.0 0.1601 0.0000 0.0003 0.1 0.1
15..8 0.520 1067.0 331.0 0.1601 0.0773 0.4829 82.5 159.8
13..16 0.108 1067.0 331.0 0.1601 0.0161 0.1004 17.2 33.2
16..3 0.461 1067.0 331.0 0.1601 0.0685 0.4277 73.1 141.6
16..7 0.499 1067.0 331.0 0.1601 0.0742 0.4631 79.1 153.3
12..17 0.353 1067.0 331.0 0.1601 0.0524 0.3274 55.9 108.4
17..18 0.004 1067.0 331.0 0.1601 0.0006 0.0034 0.6 1.1
18..4 0.000 1067.0 331.0 0.1601 0.0000 0.0000 0.0 0.0
18..9 0.007 1067.0 331.0 0.1601 0.0010 0.0062 1.1 2.1
17..6 0.003 1067.0 331.0 0.1601 0.0004 0.0028 0.5 0.9
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.962 0.026 0.005 0.002 0.001 0.001 0.001 0.001 0.001 0.000
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.830
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.158 0.012
sum of density on p0-p1 = 1.000000
Time used: 2:19
Model 7: beta (10 categories)
TREE # 1: (1, 5, (((10, (2, 8)), (3, 7)), ((4, 9), 6))); MP score: 905
lnL(ntime: 17 np: 20): -5823.239093 +0.000000
11..1 11..5 11..12 12..13 13..14 14..10 14..15 15..2 15..8 13..16 16..3 16..7 12..17 17..18 18..4 18..9 17..6
0.000004 0.000004 1.122938 0.215469 0.356835 0.118878 0.183810 0.000004 0.530235 0.110721 0.472112 0.495490 0.349359 0.002536 0.000004 0.006770 0.004225 1.697349 0.143227 1.113715
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 3.969393
(1: 0.000004, 5: 0.000004, (((10: 0.118878, (2: 0.000004, 8: 0.530235): 0.183810): 0.356835, (3: 0.472112, 7: 0.495490): 0.110721): 0.215469, ((4: 0.000004, 9: 0.006770): 0.002536, 6: 0.004225): 0.349359): 1.122938);
(C1: 0.000004, C5: 0.000004, (((C10: 0.118878, (C2: 0.000004, C8: 0.530235): 0.183810): 0.356835, (C3: 0.472112, C7: 0.495490): 0.110721): 0.215469, ((C4: 0.000004, C9: 0.006770): 0.002536, C6: 0.004225): 0.349359): 1.122938);
Detailed output identifying parameters
kappa (ts/tv) = 1.69735
Parameters in M7 (beta):
p = 0.14323 q = 1.11371
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00005 0.00056 0.00324 0.01316 0.04237 0.11596 0.28305 0.64595
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
11..1 0.000 1070.3 327.7 0.1104 0.0000 0.0000 0.0 0.0
11..5 0.000 1070.3 327.7 0.1104 0.0000 0.0000 0.0 0.0
11..12 1.123 1070.3 327.7 0.1104 0.1296 1.1735 138.7 384.6
12..13 0.215 1070.3 327.7 0.1104 0.0249 0.2252 26.6 73.8
13..14 0.357 1070.3 327.7 0.1104 0.0412 0.3729 44.1 122.2
14..10 0.119 1070.3 327.7 0.1104 0.0137 0.1242 14.7 40.7
14..15 0.184 1070.3 327.7 0.1104 0.0212 0.1921 22.7 63.0
15..2 0.000 1070.3 327.7 0.1104 0.0000 0.0000 0.0 0.0
15..8 0.530 1070.3 327.7 0.1104 0.0612 0.5541 65.5 181.6
13..16 0.111 1070.3 327.7 0.1104 0.0128 0.1157 13.7 37.9
16..3 0.472 1070.3 327.7 0.1104 0.0545 0.4934 58.3 161.7
16..7 0.495 1070.3 327.7 0.1104 0.0572 0.5178 61.2 169.7
12..17 0.349 1070.3 327.7 0.1104 0.0403 0.3651 43.2 119.6
17..18 0.003 1070.3 327.7 0.1104 0.0003 0.0027 0.3 0.9
18..4 0.000 1070.3 327.7 0.1104 0.0000 0.0000 0.0 0.0
18..9 0.007 1070.3 327.7 0.1104 0.0008 0.0071 0.8 2.3
17..6 0.004 1070.3 327.7 0.1104 0.0005 0.0044 0.5 1.4
Time used: 6:50
Model 8: beta&w>1 (11 categories)
TREE # 1: (1, 5, (((10, (2, 8)), (3, 7)), ((4, 9), 6))); MP score: 905
lnL(ntime: 17 np: 22): -5821.611514 +0.000000
11..1 11..5 11..12 12..13 13..14 14..10 14..15 15..2 15..8 13..16 16..3 16..7 12..17 17..18 18..4 18..9 17..6
0.000004 0.000004 1.130413 0.215870 0.356247 0.119075 0.182003 0.000004 0.526959 0.104324 0.474961 0.499796 0.351770 0.003644 0.000004 0.006693 0.003042 1.713721 0.950398 0.187394 2.399127 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 3.974813
(1: 0.000004, 5: 0.000004, (((10: 0.119075, (2: 0.000004, 8: 0.526959): 0.182003): 0.356247, (3: 0.474961, 7: 0.499796): 0.104324): 0.215870, ((4: 0.000004, 9: 0.006693): 0.003644, 6: 0.003042): 0.351770): 1.130413);
(C1: 0.000004, C5: 0.000004, (((C10: 0.119075, (C2: 0.000004, C8: 0.526959): 0.182003): 0.356247, (C3: 0.474961, C7: 0.499796): 0.104324): 0.215870, ((C4: 0.000004, C9: 0.006693): 0.003644, C6: 0.003042): 0.351770): 1.130413);
Detailed output identifying parameters
kappa (ts/tv) = 1.71372
Parameters in M8 (beta&w>1):
p0 = 0.95040 p = 0.18739 q = 2.39913
(p1 = 0.04960) w = 1.00000
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09504 0.09504 0.09504 0.09504 0.09504 0.09504 0.09504 0.09504 0.09504 0.09504 0.04960
w: 0.00000 0.00001 0.00020 0.00119 0.00456 0.01344 0.03357 0.07571 0.16378 0.38370 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
11..1 0.000 1069.8 328.2 0.1139 0.0000 0.0000 0.0 0.0
11..5 0.000 1069.8 328.2 0.1139 0.0000 0.0000 0.0 0.0
11..12 1.130 1069.8 328.2 0.1139 0.1333 1.1705 142.6 384.2
12..13 0.216 1069.8 328.2 0.1139 0.0255 0.2235 27.2 73.4
13..14 0.356 1069.8 328.2 0.1139 0.0420 0.3689 44.9 121.1
14..10 0.119 1069.8 328.2 0.1139 0.0140 0.1233 15.0 40.5
14..15 0.182 1069.8 328.2 0.1139 0.0215 0.1885 23.0 61.9
15..2 0.000 1069.8 328.2 0.1139 0.0000 0.0000 0.0 0.0
15..8 0.527 1069.8 328.2 0.1139 0.0621 0.5456 66.5 179.1
13..16 0.104 1069.8 328.2 0.1139 0.0123 0.1080 13.2 35.5
16..3 0.475 1069.8 328.2 0.1139 0.0560 0.4918 59.9 161.4
16..7 0.500 1069.8 328.2 0.1139 0.0589 0.5175 63.0 169.9
12..17 0.352 1069.8 328.2 0.1139 0.0415 0.3642 44.4 119.6
17..18 0.004 1069.8 328.2 0.1139 0.0004 0.0038 0.5 1.2
18..4 0.000 1069.8 328.2 0.1139 0.0000 0.0000 0.0 0.0
18..9 0.007 1069.8 328.2 0.1139 0.0008 0.0069 0.8 2.3
17..6 0.003 1069.8 328.2 0.1139 0.0004 0.0032 0.4 1.0
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
48 S 0.839 1.365 +- 0.317
75 A 0.780 1.319 +- 0.352
96 E 0.778 1.314 +- 0.359
101 L 0.571 1.109 +- 0.470
115 L 0.731 1.268 +- 0.396
137 T 0.717 1.249 +- 0.415
187 G 0.553 1.098 +- 0.466
224 S 0.803 1.337 +- 0.340
225 T 0.838 1.366 +- 0.315
234 Q 0.913 1.434 +- 0.221
238 R 0.835 1.364 +- 0.318
362 I 0.517 1.054 +- 0.482
388 T 0.676 1.215 +- 0.426
390 Q 0.796 1.330 +- 0.346
447 G 0.693 1.228 +- 0.423
462 G 0.635 1.168 +- 0.455
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.000 0.001 0.022 0.115 0.250 0.319 0.293
ws: 0.999 0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
Time used: 12:10
Model 1: NearlyNeutral -5851.222331 Model 2: PositiveSelection -5851.222331 Model 7: beta -5823.239093 Model 8: beta&w>1 -5821.611514 Model 2 vs 1 0 Model 8 vs 7 3.255158
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
