--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1865.80 -1879.55
2 -1865.96 -1879.94
--------------------------------------
TOTAL -1865.88 -1879.76
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.451659 0.005179 0.323877 0.597337 0.445167 1230.19 1275.51 1.000
r(A<->C){all} 0.069541 0.000812 0.020476 0.126434 0.066554 671.91 780.18 1.002
r(A<->G){all} 0.187722 0.001733 0.107723 0.268560 0.184180 760.38 801.50 1.000
r(A<->T){all} 0.117332 0.000831 0.067041 0.178537 0.115295 780.34 796.02 1.000
r(C<->G){all} 0.083463 0.000925 0.028729 0.142312 0.080474 811.69 819.43 1.000
r(C<->T){all} 0.510754 0.003250 0.390813 0.616064 0.510946 723.80 740.97 1.000
r(G<->T){all} 0.031189 0.000316 0.001092 0.065092 0.028921 914.98 929.28 1.000
pi(A){all} 0.267854 0.000231 0.237550 0.297582 0.267691 1091.38 1201.93 1.001
pi(C){all} 0.227746 0.000197 0.200981 0.256092 0.227221 1085.74 1293.37 1.001
pi(G){all} 0.194010 0.000183 0.168189 0.220006 0.193778 1310.99 1355.43 1.000
pi(T){all} 0.310390 0.000249 0.281256 0.343061 0.310388 1177.66 1211.45 1.000
alpha{1,2} 0.167802 0.005098 0.024165 0.303018 0.161687 977.08 1044.71 1.005
alpha{3} 2.116727 1.265798 0.479979 4.366005 1.874239 1005.88 1093.26 1.001
pinvar{all} 0.503875 0.007331 0.332414 0.659123 0.516264 873.67 876.92 1.002
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -1791.644989
Model 2: PositiveSelection -1791.644989
Model 7: beta -1791.776080
Model 8: beta&w>1 -1791.608083
Model 2 vs 1 0
Model 8 vs 7 .335994
-- Starting log on Tue Oct 25 21:15:09 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.06 sec, SCORE=1000, Nseq=9, Len=257
C1 MTDDSMDLSLDCVIAQPSSEIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C2 MTDDSMDLNLDCVIAQPSSEIVMMPLSPISTRKRRRHPKNKTRYAKRRFS
C3 MTDDSMDLSLDCVIAQPSSEIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C4 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C6 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C7 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C8 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C9 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
******.********** ****************** ** *******:
C1 PVVPSDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C2 PLEPRDIIMCEKPTHCIRLVFDQSLRWLHFDGVKNILADYGVTFSSDLHV
C3 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C4 PVEPNDIIMCDKPTHCIRLVFDQSLRWVHFDGIKNILTDYDVIFNPDLHV
C5 PVEPNDIIMCDKPTHCIRLVFDQSLRWVHFDGIKNILTDYDVIFNPDLHV
C6 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C7 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C8 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C9 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
*: * *****:****************:****:****:**.* *..****
C1 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C2 TVALVCAGNGVTFSDLTPLTFLLADMLLEFNGISTLGQTLVIGVREYPWL
C3 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFNLGQTLVIGAREYCWL
C4 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C5 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C6 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C7 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C8 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C9 TIALVCAGNGVTFSDLTPLTFILAEMLLEFNGNFTLGQTLVIGAREYHWL
*:*******************:**:******* .********.*** **
C1 PQELKTNVGKAIPQSKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C2 PKDLKSNVGQAIPQSKEWLVEHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C3 PQELKANVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDSVQQSY
C4 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C5 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C6 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C7 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C8 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C9 PQELKTNVGKAIPQAKEWLVHHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
*::**:***:****:*****.*********************** *****
C1 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C2 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C3 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C4 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C5 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C6 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C7 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C8 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C9 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
**************************************************
C1 RACFPGR
C2 RACFPGR
C3 RACFPGR
C4 RACFPGR
C5 RACFPGR
C6 RACFPGR
C7 RACFPGR
C8 RACFPGR
C9 RACFPGR
*******
-- Starting log on Tue Oct 25 21:15:59 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.08 sec, SCORE=997, Nseq=9, Len=257
C1 MTDDSMDLSLDCVIAQPSSEIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C2 MTDDSMDLNLDCVIAQPSSEIVMMPLSPISTRKRRRHPKNKTRYAKRRFS
C3 MTDDSMDLSLDCVIAQPSSEIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C4 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C6 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C7 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C8 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C9 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
******.********** ****************** ** *******:
C1 PVVPSDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C2 PLEPRDIIMCEKPTHCIRLVFDQSLRWLHFDGVKNILADYGVTFSSDLHV
C3 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C4 PVEPNDIIMCDKPTHCIRLVFDQSLRWVHFDGIKNILTDYDVIFNPDLHV
C5 PVEPNDIIMCDKPTHCIRLVFDQSLRWVHFDGIKNILTDYDVIFNPDLHV
C6 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C7 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C8 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C9 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
*: * *****:****************:****:****:**.* *..****
C1 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C2 TVALVCAGNGVTFSDLTPLTFLLADMLLEFNGISTLGQTLVIGVREYPWL
C3 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFNLGQTLVIGAREYCWL
C4 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C5 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C6 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C7 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C8 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C9 TIALVCAGNGVTFSDLTPLTFILAEMLLEFNGNFTLGQTLVIGAREYHWL
*:*******************:**:******* .********.*** **
C1 PQELKTNVGKAIPQSKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C2 PKDLKSNVGQAIPQSKEWLVEHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C3 PQELKANVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDSVQQSY
C4 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C5 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C6 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C7 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C8 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C9 PQELKTNVGKAIPQAKEWLVHHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
*::**:***:****:*****.*********************** *****
C1 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C2 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C3 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C4 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C5 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C6 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C7 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C8 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C9 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
**************************************************
C1 RACFPGR
C2 RACFPGR
C3 RACFPGR
C4 RACFPGR
C5 RACFPGR
C6 RACFPGR
C7 RACFPGR
C8 RACFPGR
C9 RACFPGR
*******
-- Starting log on Tue Oct 25 21:31:25 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5.result/gapped_alignment/codeml,TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 9 taxa and 771 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C2
Taxon 3 -> C3
Taxon 4 -> C4
Taxon 5 -> C5
Taxon 6 -> C6
Taxon 7 -> C7
Taxon 8 -> C8
Taxon 9 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1666733488
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 577549702
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 4421932486
Seed = 1228385184
Swapseed = 1666733488
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 23 unique site patterns
Division 2 has 22 unique site patterns
Division 3 has 60 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -2330.768884 -- 32.479477
Chain 2 -- -2313.407049 -- 32.479477
Chain 3 -- -2279.714462 -- 32.479477
Chain 4 -- -2302.082143 -- 32.479477
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -2341.932737 -- 32.479477
Chain 2 -- -2365.543528 -- 32.479477
Chain 3 -- -2270.031129 -- 32.479477
Chain 4 -- -2378.407124 -- 32.479477
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-2330.769] (-2313.407) (-2279.714) (-2302.082) * [-2341.933] (-2365.544) (-2270.031) (-2378.407)
1000 -- (-1899.295) [-1897.788] (-1898.478) (-1917.306) * (-1924.889) (-1923.067) [-1898.267] (-1905.301) -- 0:00:00
2000 -- [-1888.137] (-1883.660) (-1905.077) (-1890.939) * (-1889.788) [-1903.378] (-1889.505) (-1889.451) -- 0:00:00
3000 -- [-1890.416] (-1881.734) (-1900.465) (-1882.366) * (-1883.841) [-1882.713] (-1874.378) (-1885.448) -- 0:05:32
4000 -- (-1876.670) [-1872.128] (-1889.283) (-1883.178) * [-1878.347] (-1893.488) (-1874.889) (-1890.175) -- 0:04:09
5000 -- (-1873.203) [-1867.142] (-1877.614) (-1879.234) * (-1881.470) (-1877.470) [-1871.668] (-1895.004) -- 0:03:19
Average standard deviation of split frequencies: 0.078567
6000 -- (-1883.202) (-1866.196) (-1887.775) [-1871.888] * (-1876.788) (-1879.786) [-1872.266] (-1890.441) -- 0:05:31
7000 -- (-1871.257) [-1870.662] (-1879.410) (-1870.940) * (-1882.083) (-1877.377) [-1876.743] (-1883.276) -- 0:04:43
8000 -- [-1877.637] (-1874.020) (-1871.009) (-1881.509) * [-1873.259] (-1871.370) (-1873.822) (-1876.723) -- 0:04:08
9000 -- (-1875.862) (-1869.180) (-1885.202) [-1871.127] * (-1876.020) (-1880.189) (-1873.762) [-1864.316] -- 0:05:30
10000 -- [-1880.118] (-1873.193) (-1874.854) (-1870.571) * (-1877.493) (-1870.689) [-1877.321] (-1882.456) -- 0:04:57
Average standard deviation of split frequencies: 0.060265
11000 -- (-1875.949) (-1870.942) [-1891.794] (-1874.719) * (-1873.410) (-1865.424) [-1875.482] (-1881.301) -- 0:04:29
12000 -- [-1864.697] (-1873.856) (-1879.875) (-1872.949) * (-1873.044) (-1880.629) [-1872.250] (-1874.888) -- 0:05:29
13000 -- (-1871.522) [-1868.902] (-1872.756) (-1868.248) * (-1875.821) (-1876.510) [-1868.357] (-1877.102) -- 0:05:03
14000 -- (-1867.041) (-1872.450) (-1867.774) [-1872.695] * (-1872.459) [-1873.739] (-1871.838) (-1871.544) -- 0:04:41
15000 -- (-1870.120) (-1874.785) [-1873.666] (-1876.535) * [-1864.683] (-1882.462) (-1878.021) (-1871.939) -- 0:05:28
Average standard deviation of split frequencies: 0.041739
16000 -- (-1870.788) [-1879.387] (-1871.847) (-1863.229) * [-1871.661] (-1869.083) (-1871.500) (-1871.783) -- 0:05:07
17000 -- (-1876.398) (-1876.417) (-1878.951) [-1871.657] * (-1871.289) (-1876.228) [-1877.478] (-1871.627) -- 0:05:46
18000 -- (-1871.876) [-1877.750] (-1868.474) (-1872.309) * (-1880.987) (-1868.398) [-1870.907] (-1868.860) -- 0:05:27
19000 -- [-1870.063] (-1880.449) (-1874.491) (-1877.421) * (-1878.881) [-1864.517] (-1871.155) (-1869.205) -- 0:05:09
20000 -- (-1877.581) (-1869.781) [-1869.414] (-1870.356) * (-1879.597) (-1874.072) (-1871.978) [-1871.622] -- 0:05:43
Average standard deviation of split frequencies: 0.058926
21000 -- (-1867.779) [-1875.524] (-1873.680) (-1874.522) * (-1870.474) (-1871.634) (-1870.256) [-1870.524] -- 0:05:26
22000 -- (-1876.267) (-1872.922) (-1874.926) [-1873.224] * [-1870.309] (-1875.886) (-1870.284) (-1881.540) -- 0:05:11
23000 -- (-1863.519) (-1867.442) (-1875.983) [-1874.559] * (-1868.626) (-1873.434) [-1869.421] (-1869.064) -- 0:05:39
24000 -- [-1869.776] (-1875.245) (-1872.782) (-1878.232) * (-1872.697) (-1868.857) (-1871.585) [-1865.583] -- 0:05:25
25000 -- [-1867.292] (-1883.793) (-1867.284) (-1871.453) * (-1867.917) [-1870.642] (-1883.660) (-1880.450) -- 0:05:12
Average standard deviation of split frequencies: 0.039284
26000 -- (-1872.093) (-1870.999) (-1870.089) [-1870.099] * (-1862.781) (-1870.375) (-1878.149) [-1866.688] -- 0:05:37
27000 -- (-1872.240) (-1877.134) [-1872.665] (-1871.548) * (-1882.838) [-1866.456] (-1868.688) (-1870.699) -- 0:05:24
28000 -- (-1876.249) (-1878.526) [-1867.847] (-1877.112) * [-1870.392] (-1868.299) (-1875.640) (-1875.176) -- 0:05:12
29000 -- (-1873.553) (-1881.897) [-1871.186] (-1868.346) * (-1869.913) (-1875.291) (-1873.835) [-1871.877] -- 0:05:34
30000 -- [-1880.973] (-1880.398) (-1872.398) (-1873.744) * (-1877.312) (-1871.145) [-1864.649] (-1871.359) -- 0:05:23
Average standard deviation of split frequencies: 0.028182
31000 -- (-1870.877) (-1873.589) (-1881.181) [-1865.259] * (-1877.254) (-1872.038) (-1875.130) [-1870.008] -- 0:05:12
32000 -- (-1881.803) (-1872.755) [-1867.444] (-1872.921) * (-1879.204) (-1882.655) [-1874.588] (-1867.209) -- 0:05:32
33000 -- (-1874.494) (-1880.605) [-1881.078] (-1869.738) * [-1867.847] (-1881.274) (-1881.018) (-1871.850) -- 0:05:22
34000 -- (-1872.481) (-1866.201) [-1872.722] (-1872.223) * (-1878.532) [-1870.227] (-1865.284) (-1872.052) -- 0:05:12
35000 -- (-1886.457) (-1872.814) (-1875.216) [-1878.373] * (-1869.210) (-1872.625) (-1876.188) [-1869.576] -- 0:05:30
Average standard deviation of split frequencies: 0.032736
36000 -- (-1877.132) (-1872.033) [-1865.954] (-1874.658) * (-1871.856) (-1875.782) (-1873.877) [-1871.725] -- 0:05:21
37000 -- (-1870.455) (-1880.902) (-1878.118) [-1868.571] * (-1866.786) (-1874.522) [-1875.157] (-1870.236) -- 0:05:12
38000 -- (-1869.636) (-1876.060) (-1885.032) [-1868.879] * (-1871.652) [-1872.363] (-1877.076) (-1871.641) -- 0:05:29
39000 -- [-1870.382] (-1884.475) (-1880.026) (-1867.672) * (-1875.524) [-1873.313] (-1866.918) (-1871.757) -- 0:05:20
40000 -- (-1868.856) (-1880.259) (-1878.037) [-1871.281] * [-1871.136] (-1876.687) (-1865.577) (-1872.863) -- 0:05:12
Average standard deviation of split frequencies: 0.042504
41000 -- (-1866.290) (-1873.817) [-1869.873] (-1874.531) * (-1871.342) [-1867.662] (-1869.178) (-1872.861) -- 0:05:27
42000 -- (-1868.633) [-1868.016] (-1874.506) (-1870.234) * [-1868.281] (-1871.576) (-1870.551) (-1874.566) -- 0:05:19
43000 -- (-1871.459) (-1877.828) [-1865.602] (-1873.539) * (-1876.172) (-1871.695) (-1869.325) [-1874.137] -- 0:05:33
44000 -- (-1874.245) [-1871.175] (-1863.113) (-1866.641) * [-1865.701] (-1869.526) (-1866.447) (-1876.322) -- 0:05:25
45000 -- (-1875.280) [-1868.910] (-1871.564) (-1877.837) * (-1876.175) (-1875.638) (-1871.031) [-1874.554] -- 0:05:18
Average standard deviation of split frequencies: 0.052094
46000 -- [-1865.312] (-1870.195) (-1878.735) (-1865.218) * [-1869.447] (-1875.943) (-1881.921) (-1868.916) -- 0:05:31
47000 -- (-1874.024) (-1865.358) [-1864.380] (-1868.490) * [-1869.839] (-1872.620) (-1871.244) (-1871.111) -- 0:05:24
48000 -- (-1871.198) (-1874.642) [-1868.734] (-1872.020) * (-1874.473) [-1864.266] (-1887.221) (-1867.558) -- 0:05:17
49000 -- (-1868.819) (-1883.234) (-1874.335) [-1864.582] * [-1874.127] (-1869.365) (-1883.616) (-1876.990) -- 0:05:29
50000 -- [-1865.172] (-1867.593) (-1873.726) (-1871.291) * [-1869.546] (-1870.085) (-1875.868) (-1886.956) -- 0:05:23
Average standard deviation of split frequencies: 0.045745
51000 -- [-1874.499] (-1865.002) (-1868.318) (-1873.283) * (-1869.969) (-1874.873) [-1870.451] (-1882.994) -- 0:05:16
52000 -- (-1872.387) (-1877.876) (-1873.006) [-1866.273] * (-1869.826) (-1878.723) [-1868.371] (-1870.171) -- 0:05:28
53000 -- [-1878.334] (-1876.561) (-1867.133) (-1879.489) * [-1874.987] (-1877.755) (-1875.703) (-1869.927) -- 0:05:21
54000 -- (-1875.401) (-1878.297) (-1873.275) [-1869.344] * (-1875.017) (-1872.877) (-1868.136) [-1868.146] -- 0:05:15
55000 -- [-1870.806] (-1873.005) (-1868.383) (-1881.253) * (-1865.489) [-1872.635] (-1877.803) (-1876.088) -- 0:05:26
Average standard deviation of split frequencies: 0.044194
56000 -- [-1869.461] (-1872.633) (-1875.330) (-1865.149) * (-1869.178) (-1869.963) [-1866.856] (-1868.789) -- 0:05:20
57000 -- [-1872.609] (-1870.776) (-1867.394) (-1874.421) * [-1868.748] (-1868.890) (-1869.934) (-1872.276) -- 0:05:14
58000 -- [-1868.202] (-1884.234) (-1871.837) (-1877.532) * (-1880.501) [-1867.902] (-1876.142) (-1870.520) -- 0:05:24
59000 -- (-1873.699) [-1869.334] (-1876.317) (-1874.248) * (-1866.629) [-1871.719] (-1878.178) (-1873.250) -- 0:05:18
60000 -- (-1874.020) (-1876.489) (-1869.670) [-1862.689] * [-1867.355] (-1881.204) (-1880.380) (-1877.072) -- 0:05:29
Average standard deviation of split frequencies: 0.045975
61000 -- (-1871.542) [-1869.766] (-1868.127) (-1886.909) * (-1873.261) (-1888.377) [-1872.012] (-1884.993) -- 0:05:23
62000 -- [-1874.403] (-1873.916) (-1877.462) (-1870.827) * (-1878.401) (-1871.013) [-1871.760] (-1875.745) -- 0:05:17
63000 -- [-1876.048] (-1869.820) (-1866.453) (-1873.581) * [-1871.126] (-1871.449) (-1868.220) (-1861.974) -- 0:05:27
64000 -- (-1879.543) [-1872.852] (-1866.740) (-1878.670) * (-1874.756) [-1870.938] (-1870.833) (-1877.118) -- 0:05:21
65000 -- (-1874.665) [-1867.337] (-1876.338) (-1880.321) * (-1875.207) (-1871.500) (-1869.335) [-1870.440] -- 0:05:16
Average standard deviation of split frequencies: 0.043450
66000 -- (-1869.393) (-1871.328) (-1865.303) [-1865.486] * (-1874.128) (-1873.400) (-1874.652) [-1867.485] -- 0:05:25
67000 -- (-1881.714) [-1873.237] (-1877.767) (-1883.534) * (-1871.067) (-1867.843) (-1868.318) [-1872.028] -- 0:05:20
68000 -- (-1875.564) (-1869.601) [-1867.552] (-1869.988) * (-1874.345) [-1867.228] (-1869.459) (-1876.804) -- 0:05:15
69000 -- (-1873.697) (-1878.029) (-1875.187) [-1869.712] * (-1870.895) (-1871.631) (-1887.807) [-1874.723] -- 0:05:23
70000 -- (-1871.712) [-1871.948] (-1865.711) (-1879.912) * (-1872.376) (-1875.510) [-1869.767] (-1875.370) -- 0:05:18
Average standard deviation of split frequencies: 0.040581
71000 -- (-1870.051) (-1873.660) (-1864.713) [-1877.260] * (-1877.979) [-1867.975] (-1880.108) (-1878.101) -- 0:05:14
72000 -- [-1876.717] (-1863.486) (-1866.835) (-1871.623) * [-1869.577] (-1865.426) (-1866.586) (-1877.568) -- 0:05:22
73000 -- (-1877.044) (-1870.621) (-1871.734) [-1881.345] * (-1870.266) (-1879.942) (-1883.943) [-1872.485] -- 0:05:17
74000 -- (-1875.473) (-1871.986) (-1866.875) [-1879.803] * (-1864.470) [-1864.256] (-1871.831) (-1872.463) -- 0:05:12
75000 -- (-1870.061) (-1865.442) [-1867.141] (-1871.954) * [-1866.797] (-1869.783) (-1872.939) (-1870.328) -- 0:05:20
Average standard deviation of split frequencies: 0.039801
76000 -- (-1864.987) (-1873.342) [-1870.076] (-1876.233) * (-1872.007) [-1870.272] (-1877.380) (-1868.037) -- 0:05:16
77000 -- (-1875.200) [-1876.799] (-1872.698) (-1884.330) * (-1878.191) (-1876.104) [-1874.519] (-1881.757) -- 0:05:11
78000 -- (-1877.006) [-1864.562] (-1878.265) (-1875.819) * (-1869.529) (-1875.107) (-1872.452) [-1871.446] -- 0:05:19
79000 -- (-1882.847) (-1867.434) [-1869.679] (-1882.750) * (-1873.786) (-1873.451) [-1870.427] (-1868.660) -- 0:05:14
80000 -- (-1875.773) [-1868.984] (-1875.641) (-1870.871) * [-1877.948] (-1874.291) (-1872.562) (-1870.435) -- 0:05:10
Average standard deviation of split frequencies: 0.039446
81000 -- (-1875.503) [-1867.318] (-1871.248) (-1867.210) * (-1871.755) (-1875.734) (-1877.645) [-1873.973] -- 0:05:17
82000 -- (-1872.596) (-1873.237) (-1867.780) [-1876.203] * [-1867.389] (-1878.090) (-1871.751) (-1865.923) -- 0:05:13
83000 -- (-1876.326) (-1874.947) (-1869.778) [-1872.347] * [-1867.040] (-1868.235) (-1877.204) (-1873.991) -- 0:05:09
84000 -- (-1879.003) [-1875.270] (-1872.176) (-1872.588) * [-1871.753] (-1870.203) (-1880.278) (-1875.147) -- 0:05:16
85000 -- [-1875.684] (-1869.590) (-1870.392) (-1871.865) * [-1870.507] (-1874.029) (-1876.013) (-1880.569) -- 0:05:12
Average standard deviation of split frequencies: 0.032432
86000 -- (-1868.634) [-1866.762] (-1874.672) (-1882.324) * (-1871.221) (-1874.185) [-1863.522] (-1870.584) -- 0:05:08
87000 -- (-1874.946) (-1878.889) [-1868.542] (-1877.119) * (-1868.788) (-1872.792) [-1875.084] (-1873.252) -- 0:05:14
88000 -- [-1869.947] (-1886.565) (-1874.119) (-1872.736) * [-1864.946] (-1878.668) (-1870.201) (-1884.165) -- 0:05:10
89000 -- (-1872.622) (-1869.750) (-1872.820) [-1870.617] * (-1880.263) (-1865.165) [-1864.779] (-1872.248) -- 0:05:07
90000 -- (-1877.856) [-1873.732] (-1876.559) (-1865.331) * [-1876.380] (-1877.806) (-1865.081) (-1876.437) -- 0:05:13
Average standard deviation of split frequencies: 0.029463
91000 -- (-1873.163) (-1878.609) (-1872.338) [-1875.158] * (-1884.009) (-1875.234) (-1874.145) [-1870.282] -- 0:05:09
92000 -- [-1867.623] (-1870.049) (-1873.087) (-1877.038) * [-1871.703] (-1871.323) (-1866.842) (-1874.412) -- 0:05:05
93000 -- [-1874.584] (-1867.673) (-1871.124) (-1879.447) * (-1869.508) [-1869.442] (-1873.364) (-1869.225) -- 0:05:12
94000 -- [-1870.370] (-1873.233) (-1868.636) (-1871.152) * (-1870.800) (-1867.786) (-1871.193) [-1869.566] -- 0:05:08
95000 -- [-1865.813] (-1873.702) (-1873.976) (-1875.512) * (-1871.147) (-1873.170) (-1875.592) [-1867.683] -- 0:05:04
Average standard deviation of split frequencies: 0.031248
96000 -- (-1869.790) (-1882.540) (-1868.363) [-1873.539] * (-1881.802) (-1882.050) [-1872.106] (-1873.078) -- 0:05:10
97000 -- (-1868.536) [-1866.881] (-1874.295) (-1868.281) * [-1866.197] (-1869.794) (-1865.267) (-1871.388) -- 0:05:07
98000 -- (-1874.251) [-1872.344] (-1869.240) (-1879.635) * [-1870.020] (-1868.239) (-1873.146) (-1870.915) -- 0:05:12
99000 -- (-1878.100) (-1876.983) [-1877.112] (-1867.020) * (-1879.507) (-1876.259) [-1869.370] (-1878.059) -- 0:05:09
100000 -- (-1872.196) (-1872.723) (-1869.454) [-1882.459] * (-1878.800) (-1870.453) [-1870.894] (-1878.142) -- 0:05:06
Average standard deviation of split frequencies: 0.024266
101000 -- [-1871.901] (-1868.365) (-1881.138) (-1872.341) * (-1881.733) [-1867.155] (-1881.065) (-1882.078) -- 0:05:11
102000 -- (-1876.765) [-1867.557] (-1868.681) (-1877.674) * (-1866.438) (-1874.005) [-1873.244] (-1870.219) -- 0:05:08
103000 -- (-1866.751) (-1877.867) (-1873.072) [-1869.728] * (-1879.896) (-1879.860) [-1871.142] (-1880.477) -- 0:05:04
104000 -- [-1874.854] (-1876.329) (-1870.521) (-1875.570) * (-1875.794) [-1870.996] (-1870.395) (-1873.909) -- 0:05:10
105000 -- (-1876.491) (-1863.893) [-1870.907] (-1871.140) * (-1874.004) (-1878.316) [-1866.474] (-1872.843) -- 0:05:06
Average standard deviation of split frequencies: 0.021832
106000 -- [-1868.354] (-1875.327) (-1881.598) (-1870.089) * (-1861.132) (-1877.535) (-1873.419) [-1869.541] -- 0:05:03
107000 -- (-1870.782) (-1872.171) (-1885.128) [-1866.525] * (-1873.533) (-1871.456) (-1882.760) [-1868.698] -- 0:05:08
108000 -- (-1865.899) [-1867.769] (-1873.723) (-1886.974) * (-1882.884) [-1866.697] (-1881.948) (-1870.191) -- 0:05:05
109000 -- (-1867.312) [-1874.542] (-1883.621) (-1869.618) * (-1879.620) (-1871.052) (-1870.544) [-1875.486] -- 0:05:02
110000 -- (-1879.486) [-1871.118] (-1870.293) (-1867.781) * (-1874.742) (-1877.014) [-1875.153] (-1867.458) -- 0:05:07
Average standard deviation of split frequencies: 0.024784
111000 -- (-1878.068) [-1877.374] (-1873.512) (-1874.324) * [-1869.287] (-1870.177) (-1871.167) (-1879.173) -- 0:05:04
112000 -- (-1867.198) (-1881.811) (-1868.692) [-1866.967] * (-1869.584) [-1869.125] (-1869.499) (-1874.186) -- 0:05:01
113000 -- (-1869.433) [-1868.340] (-1864.222) (-1878.443) * [-1871.923] (-1879.890) (-1872.995) (-1868.009) -- 0:05:06
114000 -- [-1873.597] (-1874.856) (-1868.720) (-1871.498) * (-1882.667) (-1873.341) [-1864.101] (-1870.480) -- 0:05:03
115000 -- (-1872.639) (-1872.760) [-1869.157] (-1868.019) * (-1874.751) [-1868.043] (-1869.999) (-1875.442) -- 0:05:00
Average standard deviation of split frequencies: 0.025491
116000 -- (-1868.274) (-1874.505) (-1872.375) [-1874.398] * (-1880.747) (-1872.012) (-1873.354) [-1874.061] -- 0:05:04
117000 -- (-1876.256) [-1873.265] (-1880.058) (-1872.608) * [-1865.829] (-1868.291) (-1873.055) (-1865.742) -- 0:05:01
118000 -- (-1870.516) (-1882.682) (-1878.275) [-1864.037] * [-1865.079] (-1870.149) (-1872.903) (-1870.924) -- 0:04:58
119000 -- [-1860.374] (-1869.758) (-1883.140) (-1870.406) * (-1870.655) [-1879.628] (-1868.637) (-1871.916) -- 0:05:03
120000 -- [-1866.218] (-1883.245) (-1875.004) (-1868.316) * (-1868.123) (-1874.064) [-1870.271] (-1872.668) -- 0:05:00
Average standard deviation of split frequencies: 0.020599
121000 -- (-1869.014) (-1871.899) [-1877.478] (-1869.821) * [-1867.575] (-1876.648) (-1876.905) (-1884.293) -- 0:05:05
122000 -- (-1880.804) [-1872.721] (-1865.651) (-1873.791) * (-1866.976) (-1873.938) (-1871.565) [-1869.454] -- 0:05:02
123000 -- (-1876.851) (-1884.520) [-1875.725] (-1872.946) * (-1868.906) (-1874.131) (-1876.647) [-1870.966] -- 0:04:59
124000 -- (-1869.187) (-1874.403) [-1867.727] (-1879.534) * (-1869.769) (-1871.549) (-1880.376) [-1868.648] -- 0:05:03
125000 -- (-1877.766) (-1874.389) (-1875.593) [-1872.591] * (-1866.801) (-1868.669) (-1879.104) [-1870.136] -- 0:05:01
Average standard deviation of split frequencies: 0.017346
126000 -- (-1875.188) (-1876.150) [-1868.941] (-1873.101) * (-1871.191) [-1876.784] (-1872.557) (-1882.243) -- 0:04:58
127000 -- (-1886.116) [-1873.164] (-1877.958) (-1867.970) * (-1874.309) (-1881.229) (-1872.517) [-1868.129] -- 0:05:02
128000 -- (-1878.394) (-1873.273) (-1874.889) [-1876.783] * (-1882.672) (-1880.523) (-1868.313) [-1865.960] -- 0:04:59
129000 -- (-1875.665) [-1871.208] (-1866.143) (-1880.604) * (-1876.074) [-1870.472] (-1870.475) (-1867.290) -- 0:04:57
130000 -- (-1874.803) (-1872.964) [-1864.084] (-1869.129) * [-1873.052] (-1870.300) (-1875.249) (-1867.650) -- 0:05:01
Average standard deviation of split frequencies: 0.020334
131000 -- (-1872.186) [-1865.989] (-1871.911) (-1874.223) * (-1877.036) (-1866.833) [-1871.792] (-1870.805) -- 0:04:58
132000 -- (-1873.073) (-1870.338) (-1870.247) [-1871.734] * [-1868.221] (-1868.949) (-1870.559) (-1871.655) -- 0:04:55
133000 -- (-1874.101) (-1873.209) [-1869.496] (-1870.473) * (-1873.946) [-1869.844] (-1871.697) (-1869.322) -- 0:04:59
134000 -- (-1875.145) [-1882.398] (-1873.371) (-1881.150) * [-1871.443] (-1878.087) (-1876.534) (-1868.942) -- 0:04:57
135000 -- (-1875.805) (-1871.505) (-1876.660) [-1877.130] * (-1872.871) (-1872.711) [-1875.851] (-1872.593) -- 0:04:54
Average standard deviation of split frequencies: 0.017961
136000 -- [-1871.260] (-1878.760) (-1871.158) (-1870.215) * (-1872.597) [-1870.463] (-1871.426) (-1867.170) -- 0:04:58
137000 -- (-1866.911) (-1874.880) [-1867.023] (-1872.674) * (-1867.083) (-1870.997) (-1871.600) [-1880.134] -- 0:04:56
138000 -- (-1875.578) (-1866.683) [-1866.742] (-1883.359) * (-1873.726) (-1864.504) [-1872.884] (-1880.359) -- 0:04:53
139000 -- (-1868.630) (-1874.641) (-1870.274) [-1867.984] * [-1870.686] (-1877.486) (-1865.671) (-1880.086) -- 0:04:57
140000 -- (-1871.409) (-1870.635) [-1875.195] (-1870.944) * [-1868.656] (-1875.473) (-1869.803) (-1872.552) -- 0:04:54
Average standard deviation of split frequencies: 0.019498
141000 -- (-1874.202) (-1882.272) (-1871.062) [-1868.451] * (-1884.816) (-1871.547) [-1878.131] (-1874.792) -- 0:04:58
142000 -- (-1866.820) [-1871.969] (-1888.439) (-1876.623) * [-1868.435] (-1872.251) (-1881.643) (-1874.876) -- 0:04:56
143000 -- (-1871.721) (-1867.899) (-1884.140) [-1869.407] * [-1869.799] (-1876.196) (-1869.262) (-1875.991) -- 0:04:53
144000 -- (-1868.906) (-1874.642) [-1868.897] (-1875.891) * (-1871.772) (-1879.973) [-1875.740] (-1869.303) -- 0:04:57
145000 -- (-1874.247) (-1876.085) [-1875.790] (-1870.143) * (-1877.443) (-1870.155) (-1873.717) [-1870.060] -- 0:04:54
Average standard deviation of split frequencies: 0.023482
146000 -- (-1875.126) [-1869.472] (-1878.529) (-1864.129) * (-1879.975) [-1872.943] (-1866.898) (-1874.840) -- 0:04:52
147000 -- (-1871.721) (-1872.726) (-1879.953) [-1871.626] * (-1872.555) (-1880.467) [-1867.628] (-1872.530) -- 0:04:55
148000 -- (-1881.241) [-1870.904] (-1877.699) (-1888.632) * (-1874.519) (-1870.301) (-1870.284) [-1873.130] -- 0:04:53
149000 -- [-1875.231] (-1875.259) (-1877.918) (-1874.831) * (-1870.635) (-1875.499) (-1888.283) [-1873.438] -- 0:04:51
150000 -- (-1890.175) (-1871.628) [-1871.585] (-1876.395) * (-1874.109) [-1865.382] (-1877.279) (-1872.397) -- 0:04:54
Average standard deviation of split frequencies: 0.024461
151000 -- (-1870.285) [-1871.007] (-1881.113) (-1881.513) * (-1873.477) (-1879.987) (-1871.554) [-1868.249] -- 0:04:52
152000 -- [-1878.389] (-1869.753) (-1895.964) (-1876.024) * (-1869.375) (-1871.473) (-1871.849) [-1867.371] -- 0:04:50
153000 -- [-1879.322] (-1873.319) (-1878.060) (-1867.779) * (-1874.597) (-1871.852) [-1871.486] (-1868.004) -- 0:04:53
154000 -- (-1868.760) (-1884.796) [-1869.905] (-1871.587) * [-1870.571] (-1878.015) (-1873.714) (-1872.549) -- 0:04:51
155000 -- (-1871.990) (-1875.887) [-1867.011] (-1864.495) * (-1872.361) (-1870.372) (-1869.227) [-1864.446] -- 0:04:48
Average standard deviation of split frequencies: 0.027196
156000 -- [-1871.712] (-1869.173) (-1877.077) (-1873.398) * (-1875.817) (-1868.056) (-1875.266) [-1868.934] -- 0:04:52
157000 -- [-1869.676] (-1873.669) (-1864.419) (-1877.541) * (-1875.371) (-1872.172) [-1874.212] (-1870.574) -- 0:04:49
158000 -- (-1876.496) [-1874.834] (-1874.699) (-1871.575) * [-1874.972] (-1871.105) (-1872.447) (-1870.113) -- 0:04:47
159000 -- (-1877.911) [-1868.942] (-1871.886) (-1868.257) * (-1885.490) (-1871.172) (-1875.636) [-1877.931] -- 0:04:50
160000 -- (-1876.885) [-1870.470] (-1875.369) (-1870.863) * [-1874.375] (-1872.226) (-1872.614) (-1874.606) -- 0:04:48
Average standard deviation of split frequencies: 0.025873
161000 -- (-1868.287) (-1868.051) (-1878.841) [-1875.149] * (-1878.377) [-1870.466] (-1868.276) (-1877.753) -- 0:04:46
162000 -- (-1876.556) [-1863.914] (-1876.518) (-1877.505) * (-1876.781) [-1875.048] (-1880.049) (-1873.783) -- 0:04:49
163000 -- (-1868.495) (-1877.458) (-1878.440) [-1868.713] * (-1878.873) (-1875.607) [-1868.190] (-1880.572) -- 0:04:47
164000 -- (-1872.955) (-1875.350) [-1865.820] (-1864.345) * (-1871.312) (-1870.258) [-1870.321] (-1871.101) -- 0:04:45
165000 -- (-1878.599) (-1868.522) [-1866.556] (-1865.624) * (-1875.718) (-1870.481) [-1868.668] (-1869.632) -- 0:04:48
Average standard deviation of split frequencies: 0.025042
166000 -- (-1876.327) [-1868.762] (-1869.817) (-1890.611) * [-1868.898] (-1867.324) (-1870.853) (-1877.605) -- 0:04:46
167000 -- (-1870.581) (-1875.789) (-1874.279) [-1864.753] * (-1877.641) (-1869.560) [-1877.572] (-1869.870) -- 0:04:44
168000 -- (-1886.484) [-1873.418] (-1868.958) (-1880.178) * (-1879.711) (-1876.396) [-1874.170] (-1872.781) -- 0:04:47
169000 -- (-1871.511) (-1874.159) (-1871.385) [-1874.828] * (-1869.991) (-1886.372) (-1879.449) [-1868.968] -- 0:04:45
170000 -- (-1868.708) (-1874.994) (-1880.503) [-1875.810] * (-1867.637) [-1866.148] (-1875.194) (-1866.691) -- 0:04:43
Average standard deviation of split frequencies: 0.022599
171000 -- (-1876.855) (-1868.239) [-1875.933] (-1877.002) * (-1876.489) (-1864.979) [-1869.381] (-1869.729) -- 0:04:46
172000 -- [-1869.714] (-1871.956) (-1878.269) (-1873.452) * (-1877.465) [-1872.769] (-1865.230) (-1876.035) -- 0:04:44
173000 -- (-1870.022) (-1877.015) [-1869.445] (-1883.904) * (-1880.315) (-1871.204) [-1868.530] (-1869.687) -- 0:04:42
174000 -- (-1866.219) [-1867.121] (-1883.704) (-1871.312) * (-1870.580) (-1869.961) (-1864.965) [-1873.074] -- 0:04:44
175000 -- [-1868.560] (-1871.791) (-1870.540) (-1871.964) * (-1868.808) (-1872.995) (-1875.053) [-1872.566] -- 0:04:42
Average standard deviation of split frequencies: 0.021914
176000 -- (-1867.319) (-1874.908) [-1872.664] (-1881.865) * (-1870.131) [-1872.189] (-1868.740) (-1869.795) -- 0:04:40
177000 -- (-1867.174) (-1880.409) [-1869.787] (-1873.204) * (-1871.291) (-1870.764) [-1873.473] (-1871.713) -- 0:04:43
178000 -- (-1872.322) (-1880.139) [-1876.134] (-1872.579) * [-1871.842] (-1864.800) (-1881.707) (-1867.316) -- 0:04:41
179000 -- (-1873.953) (-1880.383) (-1869.977) [-1878.535] * [-1867.703] (-1871.518) (-1864.816) (-1880.872) -- 0:04:39
180000 -- (-1878.531) (-1872.099) (-1873.196) [-1870.022] * (-1870.317) [-1865.847] (-1879.326) (-1872.757) -- 0:04:42
Average standard deviation of split frequencies: 0.023483
181000 -- (-1866.685) (-1878.667) (-1870.139) [-1868.705] * (-1883.407) (-1869.085) [-1871.106] (-1888.415) -- 0:04:40
182000 -- (-1866.436) (-1883.578) [-1870.854] (-1880.946) * (-1865.706) [-1874.643] (-1866.568) (-1871.421) -- 0:04:43
183000 -- (-1872.258) [-1877.503] (-1875.280) (-1866.175) * (-1875.301) (-1873.855) (-1872.462) [-1879.691] -- 0:04:41
184000 -- (-1866.852) (-1875.272) (-1867.768) [-1869.230] * (-1868.728) [-1869.031] (-1873.346) (-1869.774) -- 0:04:39
185000 -- (-1875.647) (-1870.488) [-1879.725] (-1876.012) * (-1876.473) (-1875.684) [-1869.184] (-1867.276) -- 0:04:41
Average standard deviation of split frequencies: 0.022349
186000 -- (-1883.224) [-1873.449] (-1866.061) (-1875.537) * (-1875.798) (-1876.179) [-1866.163] (-1867.814) -- 0:04:40
187000 -- (-1875.208) (-1879.583) (-1875.844) [-1877.558] * (-1874.583) (-1878.707) [-1873.266] (-1879.130) -- 0:04:38
188000 -- (-1874.209) [-1867.254] (-1864.674) (-1879.911) * (-1875.499) (-1875.410) (-1869.021) [-1870.865] -- 0:04:40
189000 -- [-1865.151] (-1869.738) (-1869.518) (-1873.893) * (-1882.120) [-1880.409] (-1866.733) (-1872.349) -- 0:04:38
190000 -- (-1873.061) (-1870.228) (-1867.278) [-1870.644] * (-1883.400) (-1875.795) (-1878.280) [-1865.549] -- 0:04:37
Average standard deviation of split frequencies: 0.020903
191000 -- (-1869.446) [-1874.288] (-1873.312) (-1872.983) * [-1868.311] (-1872.482) (-1872.114) (-1872.147) -- 0:04:39
192000 -- (-1868.296) (-1873.327) [-1869.339] (-1880.401) * (-1874.259) (-1881.068) (-1868.946) [-1873.531] -- 0:04:37
193000 -- (-1866.744) [-1865.583] (-1877.860) (-1874.252) * (-1868.598) (-1874.760) (-1869.626) [-1874.526] -- 0:04:35
194000 -- [-1866.234] (-1872.634) (-1876.466) (-1872.029) * [-1865.587] (-1871.044) (-1873.915) (-1871.387) -- 0:04:38
195000 -- [-1870.893] (-1866.023) (-1877.847) (-1874.059) * (-1874.065) (-1876.433) (-1873.144) [-1865.806] -- 0:04:36
Average standard deviation of split frequencies: 0.021427
196000 -- (-1870.974) (-1872.890) [-1874.297] (-1874.163) * (-1879.676) (-1870.916) (-1873.546) [-1866.768] -- 0:04:34
197000 -- (-1871.600) (-1876.511) (-1881.063) [-1868.172] * (-1878.558) (-1871.059) (-1871.028) [-1868.813] -- 0:04:37
198000 -- (-1869.670) (-1870.955) [-1875.310] (-1873.062) * (-1877.294) (-1877.261) (-1872.865) [-1869.478] -- 0:04:35
199000 -- (-1874.538) (-1872.924) [-1872.904] (-1873.468) * [-1868.108] (-1879.159) (-1873.727) (-1881.525) -- 0:04:33
200000 -- (-1868.466) (-1876.148) (-1876.088) [-1873.216] * (-1873.909) (-1878.094) (-1875.940) [-1870.315] -- 0:04:36
Average standard deviation of split frequencies: 0.021143
201000 -- [-1871.800] (-1867.057) (-1880.003) (-1881.944) * (-1874.321) (-1873.286) [-1868.546] (-1872.338) -- 0:04:34
202000 -- [-1867.815] (-1873.954) (-1869.349) (-1864.346) * [-1871.478] (-1882.069) (-1868.172) (-1870.602) -- 0:04:32
203000 -- (-1873.867) [-1872.900] (-1866.558) (-1866.740) * (-1875.822) [-1868.690] (-1875.641) (-1884.474) -- 0:04:34
204000 -- (-1872.419) [-1873.444] (-1877.543) (-1875.500) * (-1873.289) (-1870.390) [-1870.185] (-1881.298) -- 0:04:33
205000 -- (-1877.105) (-1868.323) [-1872.600] (-1875.102) * (-1875.613) (-1870.027) [-1870.932] (-1877.971) -- 0:04:31
Average standard deviation of split frequencies: 0.020387
206000 -- (-1873.462) [-1867.898] (-1868.222) (-1875.490) * (-1873.050) (-1872.836) (-1876.461) [-1874.010] -- 0:04:33
207000 -- [-1879.955] (-1870.879) (-1878.085) (-1875.237) * [-1869.079] (-1872.176) (-1873.071) (-1882.700) -- 0:04:31
208000 -- (-1865.436) (-1868.350) [-1866.139] (-1868.187) * (-1868.795) [-1865.821] (-1874.512) (-1867.287) -- 0:04:34
209000 -- (-1869.774) (-1877.803) [-1875.628] (-1869.041) * (-1873.851) (-1867.036) [-1870.541] (-1874.134) -- 0:04:32
210000 -- (-1880.257) (-1874.380) [-1876.734] (-1868.752) * (-1873.729) (-1870.651) [-1881.462] (-1869.644) -- 0:04:30
Average standard deviation of split frequencies: 0.020139
211000 -- (-1873.038) (-1874.109) (-1869.588) [-1874.749] * (-1875.564) [-1869.150] (-1879.065) (-1875.896) -- 0:04:32
212000 -- (-1871.923) (-1871.433) [-1871.972] (-1877.766) * (-1868.527) (-1872.333) (-1875.677) [-1870.628] -- 0:04:31
213000 -- (-1882.510) (-1876.534) [-1873.368] (-1870.093) * (-1876.867) [-1872.506] (-1871.854) (-1868.604) -- 0:04:29
214000 -- (-1870.679) (-1874.142) (-1881.819) [-1866.968] * (-1870.259) (-1874.206) (-1874.996) [-1872.663] -- 0:04:31
215000 -- (-1875.749) (-1887.717) [-1868.201] (-1870.109) * (-1873.529) (-1868.239) [-1875.805] (-1873.787) -- 0:04:30
Average standard deviation of split frequencies: 0.018055
216000 -- (-1866.965) [-1872.210] (-1872.808) (-1875.845) * (-1870.682) [-1869.530] (-1875.125) (-1878.102) -- 0:04:28
217000 -- (-1868.111) [-1874.785] (-1869.466) (-1870.704) * (-1872.606) (-1868.519) [-1875.522] (-1871.427) -- 0:04:30
218000 -- (-1872.452) (-1868.343) [-1868.158] (-1873.189) * (-1874.282) (-1876.153) (-1876.272) [-1867.186] -- 0:04:29
219000 -- (-1872.196) (-1870.318) (-1865.732) [-1883.781] * (-1874.156) (-1878.349) (-1873.843) [-1877.693] -- 0:04:27
220000 -- [-1869.037] (-1884.941) (-1866.784) (-1876.462) * (-1879.889) (-1867.539) (-1870.850) [-1868.851] -- 0:04:29
Average standard deviation of split frequencies: 0.017479
221000 -- (-1872.006) (-1871.134) [-1873.388] (-1873.040) * [-1869.943] (-1880.950) (-1864.764) (-1876.840) -- 0:04:27
222000 -- (-1876.356) (-1873.945) [-1867.669] (-1874.475) * (-1872.869) (-1868.741) [-1878.385] (-1871.816) -- 0:04:26
223000 -- [-1870.983] (-1882.624) (-1869.480) (-1872.927) * [-1867.972] (-1876.743) (-1878.140) (-1876.253) -- 0:04:28
224000 -- (-1873.766) (-1884.411) [-1866.001] (-1869.772) * (-1876.430) [-1877.276] (-1882.587) (-1866.910) -- 0:04:26
225000 -- [-1867.971] (-1876.068) (-1866.256) (-1880.771) * [-1868.071] (-1872.367) (-1872.226) (-1876.077) -- 0:04:25
Average standard deviation of split frequencies: 0.017825
226000 -- (-1874.205) [-1871.040] (-1871.260) (-1870.063) * (-1867.548) (-1874.998) (-1872.777) [-1871.955] -- 0:04:27
227000 -- [-1876.284] (-1876.250) (-1866.033) (-1877.430) * (-1876.432) [-1872.613] (-1875.550) (-1876.037) -- 0:04:25
228000 -- [-1872.974] (-1880.237) (-1873.041) (-1873.156) * (-1873.052) [-1880.164] (-1872.364) (-1873.840) -- 0:04:24
229000 -- (-1868.147) [-1868.137] (-1869.995) (-1880.322) * (-1869.714) [-1867.906] (-1867.950) (-1865.901) -- 0:04:25
230000 -- (-1872.302) (-1866.372) (-1882.933) [-1873.933] * (-1869.003) (-1878.271) [-1875.765] (-1870.202) -- 0:04:24
Average standard deviation of split frequencies: 0.016349
231000 -- [-1864.497] (-1874.309) (-1868.602) (-1871.640) * (-1867.487) (-1872.831) (-1875.371) [-1866.821] -- 0:04:22
232000 -- [-1872.570] (-1879.282) (-1868.215) (-1868.581) * [-1875.964] (-1867.504) (-1872.354) (-1866.548) -- 0:04:24
233000 -- (-1867.157) (-1874.174) (-1877.072) [-1873.559] * [-1867.007] (-1878.495) (-1874.292) (-1870.683) -- 0:04:23
234000 -- (-1873.642) [-1874.002] (-1872.783) (-1874.011) * (-1874.813) (-1875.005) [-1865.980] (-1868.378) -- 0:04:21
235000 -- [-1866.644] (-1867.772) (-1880.686) (-1871.493) * (-1875.224) (-1875.762) [-1874.505] (-1877.995) -- 0:04:23
Average standard deviation of split frequencies: 0.015980
236000 -- (-1871.244) (-1879.938) (-1882.251) [-1873.652] * (-1876.335) (-1869.975) [-1869.577] (-1879.152) -- 0:04:22
237000 -- (-1868.248) (-1874.611) [-1870.338] (-1868.318) * (-1879.948) [-1868.533] (-1881.443) (-1869.636) -- 0:04:23
238000 -- (-1884.098) (-1868.695) (-1870.389) [-1870.615] * (-1879.500) (-1874.912) (-1881.297) [-1870.017] -- 0:04:22
239000 -- (-1882.711) (-1872.248) (-1873.876) [-1865.659] * [-1868.192] (-1877.978) (-1879.311) (-1873.720) -- 0:04:21
240000 -- (-1877.168) (-1874.492) (-1874.176) [-1869.575] * [-1871.474] (-1876.604) (-1872.325) (-1869.124) -- 0:04:22
Average standard deviation of split frequencies: 0.014780
241000 -- [-1865.867] (-1874.919) (-1874.577) (-1873.259) * (-1867.571) (-1875.943) (-1869.238) [-1870.918] -- 0:04:21
242000 -- [-1874.368] (-1873.501) (-1872.242) (-1871.109) * [-1872.115] (-1871.374) (-1878.857) (-1871.905) -- 0:04:19
243000 -- (-1871.844) (-1872.740) (-1882.514) [-1867.477] * (-1870.913) [-1869.402] (-1891.133) (-1874.523) -- 0:04:21
244000 -- [-1874.617] (-1874.970) (-1875.832) (-1872.042) * (-1870.365) (-1875.156) (-1872.811) [-1872.750] -- 0:04:20
245000 -- (-1879.554) (-1871.358) [-1873.853] (-1881.388) * (-1875.594) [-1874.046] (-1874.236) (-1876.257) -- 0:04:18
Average standard deviation of split frequencies: 0.014982
246000 -- (-1877.706) [-1869.457] (-1869.691) (-1881.562) * (-1873.661) (-1878.949) [-1866.572] (-1879.825) -- 0:04:20
247000 -- (-1882.509) [-1871.694] (-1869.986) (-1872.232) * (-1878.981) (-1881.454) [-1868.179] (-1865.554) -- 0:04:19
248000 -- [-1874.752] (-1869.628) (-1875.093) (-1868.743) * (-1873.369) (-1873.790) [-1869.709] (-1868.879) -- 0:04:17
249000 -- (-1867.364) (-1871.852) (-1881.545) [-1871.614] * (-1868.177) (-1875.953) (-1869.714) [-1873.983] -- 0:04:19
250000 -- [-1865.269] (-1869.309) (-1878.009) (-1876.447) * (-1871.998) (-1871.636) (-1864.769) [-1868.338] -- 0:04:18
Average standard deviation of split frequencies: 0.014361
251000 -- (-1877.960) (-1866.810) [-1870.315] (-1875.652) * [-1868.089] (-1878.754) (-1868.535) (-1868.503) -- 0:04:16
252000 -- (-1872.977) (-1879.056) (-1871.736) [-1869.885] * (-1875.472) [-1872.306] (-1877.207) (-1885.900) -- 0:04:18
253000 -- [-1869.365] (-1871.991) (-1878.388) (-1868.040) * (-1874.530) (-1867.574) [-1870.200] (-1871.779) -- 0:04:16
254000 -- (-1874.757) (-1870.445) (-1876.671) [-1868.144] * [-1872.142] (-1870.603) (-1869.379) (-1873.177) -- 0:04:15
255000 -- (-1872.018) (-1880.784) (-1876.203) [-1868.464] * (-1876.081) (-1876.351) [-1866.914] (-1870.741) -- 0:04:17
Average standard deviation of split frequencies: 0.014564
256000 -- (-1874.684) [-1873.757] (-1875.148) (-1868.610) * (-1867.404) (-1874.014) (-1882.007) [-1866.431] -- 0:04:15
257000 -- (-1871.376) (-1874.522) (-1866.821) [-1868.630] * (-1871.337) (-1868.886) (-1870.367) [-1868.360] -- 0:04:14
258000 -- (-1868.153) (-1864.480) (-1873.267) [-1873.722] * (-1875.032) (-1874.573) [-1872.698] (-1869.997) -- 0:04:15
259000 -- (-1866.479) (-1880.700) (-1864.072) [-1870.749] * (-1872.661) (-1868.577) [-1881.650] (-1872.823) -- 0:04:14
260000 -- (-1875.611) (-1875.185) (-1869.364) [-1869.036] * (-1888.671) (-1867.032) [-1875.052] (-1872.894) -- 0:04:13
Average standard deviation of split frequencies: 0.015783
261000 -- (-1869.245) [-1877.572] (-1866.111) (-1877.175) * (-1875.465) [-1867.700] (-1886.761) (-1875.339) -- 0:04:14
262000 -- [-1876.963] (-1876.354) (-1879.203) (-1877.371) * (-1876.691) (-1868.358) (-1872.703) [-1868.464] -- 0:04:13
263000 -- [-1879.872] (-1883.952) (-1871.152) (-1874.926) * (-1867.966) (-1882.875) [-1873.423] (-1875.897) -- 0:04:12
264000 -- (-1880.427) (-1867.788) (-1863.134) [-1864.607] * (-1869.364) [-1871.588] (-1873.360) (-1872.885) -- 0:04:13
265000 -- (-1872.347) (-1867.257) [-1867.830] (-1863.660) * (-1872.947) [-1870.873] (-1872.962) (-1879.208) -- 0:04:12
Average standard deviation of split frequencies: 0.017722
266000 -- (-1872.324) (-1875.752) (-1878.417) [-1871.622] * [-1872.299] (-1866.790) (-1870.615) (-1873.438) -- 0:04:13
267000 -- (-1866.301) (-1873.427) (-1880.847) [-1875.757] * [-1870.514] (-1880.469) (-1875.452) (-1873.467) -- 0:04:12
268000 -- (-1876.443) (-1876.268) [-1874.749] (-1873.940) * (-1875.069) (-1873.212) (-1876.188) [-1869.382] -- 0:04:11
269000 -- (-1873.220) (-1864.521) [-1862.117] (-1870.534) * (-1868.696) [-1875.999] (-1875.067) (-1867.876) -- 0:04:12
270000 -- [-1861.500] (-1866.532) (-1870.952) (-1874.618) * (-1871.938) [-1866.964] (-1871.482) (-1875.621) -- 0:04:11
Average standard deviation of split frequencies: 0.016625
271000 -- (-1872.531) (-1875.516) [-1871.781] (-1866.380) * (-1872.056) (-1871.325) (-1870.273) [-1873.621] -- 0:04:10
272000 -- (-1873.168) (-1874.312) [-1870.683] (-1875.541) * [-1874.721] (-1871.603) (-1874.881) (-1871.580) -- 0:04:11
273000 -- (-1880.383) (-1876.465) (-1866.229) [-1876.507] * (-1882.557) (-1877.523) [-1873.100] (-1870.054) -- 0:04:10
274000 -- (-1869.364) (-1878.076) [-1875.154] (-1876.011) * (-1869.899) (-1869.591) (-1877.543) [-1870.578] -- 0:04:09
275000 -- (-1869.941) (-1881.743) (-1880.336) [-1865.046] * (-1884.047) (-1881.096) (-1873.554) [-1870.838] -- 0:04:10
Average standard deviation of split frequencies: 0.014285
276000 -- (-1873.054) (-1885.017) (-1881.633) [-1862.043] * (-1871.996) (-1874.242) [-1875.881] (-1867.521) -- 0:04:09
277000 -- (-1865.694) [-1876.625] (-1876.444) (-1872.825) * (-1888.401) (-1875.371) (-1869.890) [-1874.608] -- 0:04:07
278000 -- (-1872.322) [-1869.327] (-1875.144) (-1876.201) * (-1873.899) [-1871.542] (-1865.780) (-1874.783) -- 0:04:09
279000 -- (-1878.261) (-1867.709) (-1871.224) [-1866.884] * (-1876.212) (-1867.827) (-1880.205) [-1872.950] -- 0:04:08
280000 -- (-1880.286) [-1870.558] (-1882.780) (-1870.696) * [-1873.757] (-1873.336) (-1878.711) (-1883.364) -- 0:04:06
Average standard deviation of split frequencies: 0.012215
281000 -- (-1871.191) (-1866.225) (-1875.834) [-1870.933] * (-1874.656) (-1876.441) (-1873.871) [-1875.059] -- 0:04:08
282000 -- (-1879.550) (-1866.054) (-1872.203) [-1873.740] * (-1874.352) [-1878.327] (-1882.575) (-1882.071) -- 0:04:06
283000 -- (-1873.747) (-1872.289) [-1878.047] (-1868.422) * (-1881.025) (-1868.268) (-1872.915) [-1866.742] -- 0:04:05
284000 -- (-1867.758) [-1868.696] (-1871.959) (-1883.635) * (-1873.881) (-1869.681) (-1874.543) [-1876.318] -- 0:04:07
285000 -- (-1872.846) (-1876.400) (-1876.454) [-1878.316] * (-1874.285) (-1874.831) (-1869.788) [-1867.123] -- 0:04:05
Average standard deviation of split frequencies: 0.012587
286000 -- (-1883.455) [-1870.052] (-1875.232) (-1867.834) * (-1876.612) [-1872.061] (-1868.794) (-1866.592) -- 0:04:07
287000 -- (-1872.498) (-1867.414) (-1871.083) [-1870.275] * (-1872.897) (-1875.731) [-1865.455] (-1870.810) -- 0:04:05
288000 -- [-1870.322] (-1877.715) (-1870.629) (-1869.856) * (-1873.469) (-1869.625) (-1884.092) [-1871.654] -- 0:04:04
289000 -- [-1873.127] (-1885.785) (-1871.956) (-1879.080) * (-1878.557) [-1867.244] (-1875.675) (-1874.071) -- 0:04:06
290000 -- (-1877.535) (-1880.797) [-1868.273] (-1876.098) * (-1876.287) [-1870.409] (-1871.878) (-1868.003) -- 0:04:04
Average standard deviation of split frequencies: 0.011942
291000 -- (-1875.338) (-1873.066) [-1868.477] (-1875.555) * (-1866.148) (-1879.136) [-1865.874] (-1869.745) -- 0:04:03
292000 -- (-1875.876) [-1873.238] (-1875.229) (-1875.373) * [-1871.480] (-1868.974) (-1870.496) (-1873.692) -- 0:04:04
293000 -- (-1869.091) [-1865.272] (-1876.409) (-1876.365) * (-1867.266) (-1875.358) (-1875.951) [-1868.305] -- 0:04:03
294000 -- [-1870.234] (-1869.135) (-1887.320) (-1874.875) * (-1871.888) (-1864.505) (-1882.064) [-1873.184] -- 0:04:02
295000 -- (-1866.608) (-1876.771) (-1875.149) [-1872.860] * [-1870.987] (-1882.042) (-1875.852) (-1872.029) -- 0:04:03
Average standard deviation of split frequencies: 0.011003
296000 -- (-1868.241) (-1874.138) (-1871.370) [-1867.552] * (-1881.968) (-1867.319) [-1869.093] (-1868.201) -- 0:04:02
297000 -- (-1872.001) (-1872.293) [-1868.374] (-1878.891) * [-1872.358] (-1877.446) (-1876.286) (-1873.243) -- 0:04:01
298000 -- (-1867.189) (-1881.845) (-1873.791) [-1864.020] * (-1874.042) [-1868.330] (-1870.723) (-1869.725) -- 0:04:02
299000 -- (-1868.521) (-1881.403) (-1885.068) [-1866.015] * (-1880.985) (-1876.245) [-1871.216] (-1881.282) -- 0:04:01
300000 -- [-1876.223] (-1867.253) (-1875.107) (-1873.878) * (-1872.421) (-1872.873) (-1872.475) [-1867.870] -- 0:04:00
Average standard deviation of split frequencies: 0.012115
301000 -- [-1880.451] (-1871.745) (-1873.927) (-1863.028) * (-1868.032) [-1865.311] (-1871.769) (-1867.725) -- 0:04:01
302000 -- (-1874.405) (-1873.400) (-1872.281) [-1876.205] * (-1871.074) (-1880.341) (-1875.986) [-1865.585] -- 0:04:00
303000 -- (-1873.111) [-1872.909] (-1871.438) (-1873.684) * (-1865.855) (-1875.614) (-1868.970) [-1870.582] -- 0:04:01
304000 -- (-1876.825) (-1880.878) (-1887.867) [-1869.795] * (-1879.904) (-1877.594) (-1871.783) [-1874.935] -- 0:04:00
305000 -- (-1875.292) (-1873.227) (-1871.116) [-1867.037] * (-1866.972) (-1878.539) (-1872.288) [-1867.075] -- 0:03:59
Average standard deviation of split frequencies: 0.011204
306000 -- (-1877.953) [-1874.521] (-1869.059) (-1880.241) * [-1867.655] (-1870.028) (-1876.960) (-1870.457) -- 0:04:00
307000 -- (-1866.164) (-1870.882) [-1869.587] (-1871.817) * (-1865.814) [-1870.052] (-1879.422) (-1876.298) -- 0:03:59
308000 -- (-1878.753) (-1871.492) (-1866.741) [-1860.471] * (-1874.327) [-1874.889] (-1869.776) (-1873.264) -- 0:03:58
309000 -- [-1865.964] (-1868.997) (-1880.916) (-1876.047) * (-1875.272) [-1876.743] (-1875.480) (-1886.779) -- 0:03:59
310000 -- [-1870.201] (-1868.975) (-1867.887) (-1873.710) * (-1872.694) (-1868.223) (-1890.322) [-1870.030] -- 0:03:58
Average standard deviation of split frequencies: 0.011587
311000 -- (-1874.774) (-1869.066) [-1867.677] (-1878.527) * (-1881.817) [-1868.307] (-1882.612) (-1873.680) -- 0:03:57
312000 -- [-1866.878] (-1873.031) (-1869.923) (-1874.237) * (-1870.903) [-1873.914] (-1872.230) (-1868.659) -- 0:03:58
313000 -- (-1872.432) (-1862.941) (-1871.573) [-1876.025] * [-1866.595] (-1871.713) (-1872.132) (-1867.796) -- 0:03:57
314000 -- [-1872.458] (-1881.191) (-1875.382) (-1868.953) * (-1877.295) (-1866.545) [-1872.615] (-1875.691) -- 0:03:55
315000 -- [-1865.655] (-1875.998) (-1877.674) (-1875.001) * (-1876.816) [-1870.198] (-1874.480) (-1882.748) -- 0:03:57
Average standard deviation of split frequencies: 0.012341
316000 -- (-1870.610) [-1872.224] (-1871.567) (-1870.669) * (-1872.478) (-1873.654) [-1872.516] (-1867.820) -- 0:03:55
317000 -- (-1876.914) (-1869.492) (-1870.242) [-1870.749] * (-1866.984) (-1879.783) (-1873.974) [-1876.690] -- 0:03:54
318000 -- (-1875.044) (-1876.978) [-1872.199] (-1881.161) * (-1873.072) [-1870.073] (-1872.896) (-1877.339) -- 0:03:55
319000 -- (-1875.933) [-1873.991] (-1876.652) (-1880.598) * (-1869.521) (-1875.890) [-1865.702] (-1884.885) -- 0:03:54
320000 -- (-1880.308) (-1871.523) (-1870.792) [-1869.711] * (-1870.588) (-1871.422) (-1880.052) [-1874.034] -- 0:03:53
Average standard deviation of split frequencies: 0.012429
321000 -- (-1871.506) (-1869.162) [-1876.144] (-1881.602) * [-1874.096] (-1876.101) (-1874.773) (-1867.094) -- 0:03:54
322000 -- (-1876.233) (-1876.820) [-1871.984] (-1867.479) * (-1876.138) (-1872.971) (-1873.581) [-1870.865] -- 0:03:53
323000 -- (-1878.317) (-1878.017) (-1870.289) [-1870.551] * [-1873.472] (-1866.891) (-1876.151) (-1872.806) -- 0:03:52
324000 -- (-1887.483) (-1874.040) (-1877.523) [-1870.693] * [-1871.230] (-1873.223) (-1869.223) (-1871.366) -- 0:03:53
325000 -- (-1869.411) (-1873.413) [-1865.817] (-1876.840) * (-1877.551) (-1874.150) (-1866.157) [-1867.504] -- 0:03:52
Average standard deviation of split frequencies: 0.011831
326000 -- (-1876.328) (-1871.208) [-1871.087] (-1869.219) * (-1874.404) (-1868.129) (-1880.396) [-1873.637] -- 0:03:53
327000 -- (-1870.345) [-1870.086] (-1871.112) (-1871.225) * (-1876.762) [-1868.112] (-1869.880) (-1874.907) -- 0:03:52
328000 -- (-1869.826) (-1873.266) (-1877.852) [-1871.603] * (-1877.443) (-1866.977) (-1883.025) [-1872.088] -- 0:03:51
329000 -- [-1866.106] (-1884.312) (-1870.310) (-1875.789) * (-1865.203) [-1869.645] (-1883.206) (-1872.204) -- 0:03:52
330000 -- (-1874.054) (-1870.781) (-1880.682) [-1864.154] * (-1872.796) [-1870.936] (-1878.696) (-1869.136) -- 0:03:51
Average standard deviation of split frequencies: 0.009331
331000 -- (-1864.766) (-1869.281) (-1874.368) [-1868.198] * (-1865.339) (-1872.799) (-1876.927) [-1870.796] -- 0:03:50
332000 -- (-1874.742) (-1872.464) [-1879.598] (-1874.146) * (-1870.436) [-1875.016] (-1876.026) (-1875.419) -- 0:03:51
333000 -- [-1870.072] (-1875.599) (-1873.584) (-1868.019) * (-1871.377) (-1878.255) [-1884.549] (-1879.542) -- 0:03:50
334000 -- (-1870.228) [-1870.588] (-1873.674) (-1876.158) * [-1871.603] (-1868.786) (-1875.165) (-1873.414) -- 0:03:49
335000 -- [-1871.573] (-1876.100) (-1871.505) (-1874.849) * (-1869.988) (-1870.681) (-1874.816) [-1872.168] -- 0:03:50
Average standard deviation of split frequencies: 0.008673
336000 -- (-1874.837) (-1876.735) (-1880.154) [-1868.304] * (-1874.884) [-1874.546] (-1876.512) (-1870.044) -- 0:03:49
337000 -- (-1876.985) (-1870.917) (-1869.069) [-1876.408] * (-1874.164) [-1869.484] (-1878.470) (-1871.042) -- 0:03:48
338000 -- (-1868.134) [-1875.693] (-1870.138) (-1872.590) * (-1874.164) [-1870.430] (-1867.383) (-1876.543) -- 0:03:49
339000 -- (-1870.651) (-1874.399) [-1880.031] (-1875.254) * (-1869.276) (-1873.040) (-1876.358) [-1871.627] -- 0:03:48
340000 -- (-1869.572) [-1864.051] (-1867.963) (-1883.284) * (-1870.478) (-1874.465) [-1873.608] (-1879.451) -- 0:03:47
Average standard deviation of split frequencies: 0.008554
341000 -- (-1865.059) (-1882.949) [-1868.020] (-1871.478) * (-1869.468) (-1871.552) (-1865.322) [-1866.525] -- 0:03:48
342000 -- (-1869.954) (-1871.347) (-1867.452) [-1871.498] * (-1876.222) [-1871.482] (-1864.177) (-1865.823) -- 0:03:47
343000 -- (-1874.378) (-1869.823) [-1869.031] (-1869.900) * (-1874.392) (-1872.362) [-1870.576] (-1878.331) -- 0:03:46
344000 -- (-1869.112) [-1868.419] (-1868.271) (-1875.045) * (-1878.722) (-1870.036) [-1872.762] (-1869.886) -- 0:03:46
345000 -- [-1878.733] (-1874.313) (-1870.488) (-1880.420) * (-1869.172) [-1865.879] (-1874.552) (-1868.694) -- 0:03:45
Average standard deviation of split frequencies: 0.009413
346000 -- (-1878.452) [-1879.625] (-1867.626) (-1870.657) * (-1868.640) [-1870.127] (-1871.284) (-1879.692) -- 0:03:44
347000 -- [-1869.230] (-1873.269) (-1876.607) (-1869.993) * (-1862.310) [-1868.868] (-1872.772) (-1876.009) -- 0:03:45
348000 -- (-1866.466) (-1874.505) (-1874.952) [-1874.072] * (-1873.457) (-1880.321) (-1867.823) [-1868.360] -- 0:03:44
349000 -- [-1874.191] (-1867.658) (-1874.734) (-1872.233) * (-1883.635) (-1869.460) [-1868.146] (-1876.652) -- 0:03:43
350000 -- (-1878.818) (-1869.582) (-1877.413) [-1876.237] * (-1883.188) [-1868.415] (-1874.528) (-1877.895) -- 0:03:44
Average standard deviation of split frequencies: 0.008066
351000 -- (-1867.242) (-1866.811) (-1870.292) [-1869.790] * (-1876.275) (-1871.662) [-1871.232] (-1875.337) -- 0:03:43
352000 -- [-1868.852] (-1872.508) (-1870.617) (-1868.216) * [-1883.790] (-1874.453) (-1878.945) (-1871.671) -- 0:03:42
353000 -- (-1873.963) [-1865.282] (-1867.935) (-1876.044) * (-1874.190) (-1867.758) (-1880.717) [-1864.533] -- 0:03:43
354000 -- (-1873.645) (-1871.377) [-1875.145] (-1869.641) * (-1874.104) [-1874.998] (-1888.565) (-1863.830) -- 0:03:42
355000 -- (-1873.948) [-1865.875] (-1870.770) (-1883.418) * [-1871.668] (-1869.796) (-1880.513) (-1876.845) -- 0:03:41
Average standard deviation of split frequencies: 0.008788
356000 -- (-1877.026) (-1875.224) [-1876.268] (-1864.561) * (-1876.636) (-1876.875) [-1880.606] (-1872.183) -- 0:03:42
357000 -- (-1871.345) (-1886.395) (-1867.714) [-1870.715] * (-1870.870) [-1866.046] (-1871.678) (-1876.505) -- 0:03:41
358000 -- [-1881.179] (-1877.036) (-1871.473) (-1876.327) * [-1868.821] (-1876.306) (-1870.940) (-1864.792) -- 0:03:40
359000 -- (-1880.843) (-1868.726) (-1869.400) [-1873.405] * [-1864.770] (-1877.451) (-1887.474) (-1878.331) -- 0:03:41
360000 -- [-1867.357] (-1869.762) (-1871.006) (-1873.878) * (-1865.846) (-1869.729) (-1867.066) [-1866.598] -- 0:03:40
Average standard deviation of split frequencies: 0.009625
361000 -- (-1864.027) (-1872.687) [-1879.002] (-1881.772) * (-1871.393) (-1872.039) (-1870.811) [-1877.081] -- 0:03:39
362000 -- [-1869.645] (-1868.155) (-1871.724) (-1875.933) * [-1867.895] (-1873.774) (-1871.600) (-1868.535) -- 0:03:40
363000 -- (-1877.796) [-1867.146] (-1870.695) (-1872.164) * [-1873.681] (-1867.824) (-1875.870) (-1876.586) -- 0:03:39
364000 -- (-1876.370) (-1880.166) [-1865.037] (-1871.554) * [-1869.988] (-1872.703) (-1871.705) (-1868.911) -- 0:03:38
365000 -- (-1880.379) (-1881.736) [-1872.132] (-1874.056) * [-1868.916] (-1871.324) (-1871.575) (-1879.312) -- 0:03:39
Average standard deviation of split frequencies: 0.010655
366000 -- [-1876.096] (-1880.098) (-1872.477) (-1874.232) * [-1879.858] (-1871.072) (-1874.894) (-1872.844) -- 0:03:38
367000 -- [-1866.320] (-1870.860) (-1870.155) (-1873.018) * [-1878.376] (-1865.305) (-1893.870) (-1872.871) -- 0:03:37
368000 -- [-1873.076] (-1874.887) (-1870.556) (-1868.276) * [-1870.156] (-1880.407) (-1873.171) (-1875.889) -- 0:03:38
369000 -- (-1869.318) (-1871.677) [-1869.132] (-1879.773) * (-1872.475) (-1880.278) (-1870.461) [-1872.786] -- 0:03:37
370000 -- (-1870.193) [-1873.420] (-1872.092) (-1878.924) * (-1870.837) [-1866.676] (-1870.731) (-1869.851) -- 0:03:36
Average standard deviation of split frequencies: 0.010752
371000 -- (-1878.478) [-1869.343] (-1873.593) (-1883.894) * [-1869.488] (-1879.074) (-1871.619) (-1869.656) -- 0:03:37
372000 -- (-1864.104) [-1873.080] (-1876.307) (-1869.523) * (-1865.744) (-1867.428) [-1870.859] (-1874.042) -- 0:03:36
373000 -- [-1871.835] (-1870.980) (-1868.333) (-1874.581) * (-1885.114) (-1879.502) [-1863.762] (-1866.374) -- 0:03:36
374000 -- (-1878.278) [-1868.374] (-1871.774) (-1871.420) * (-1876.643) [-1871.262] (-1868.135) (-1870.640) -- 0:03:35
375000 -- [-1878.531] (-1869.751) (-1884.035) (-1870.872) * (-1871.805) (-1866.747) [-1867.463] (-1877.142) -- 0:03:35
Average standard deviation of split frequencies: 0.010144
376000 -- (-1874.767) [-1872.413] (-1869.547) (-1874.540) * (-1879.094) (-1875.243) [-1864.504] (-1872.858) -- 0:03:35
377000 -- (-1873.844) (-1867.899) [-1868.439] (-1877.762) * (-1876.331) (-1872.502) (-1864.974) [-1877.390] -- 0:03:34
378000 -- (-1877.919) [-1868.922] (-1873.364) (-1868.214) * [-1874.575] (-1870.940) (-1867.457) (-1870.881) -- 0:03:33
379000 -- [-1875.135] (-1871.637) (-1869.444) (-1876.148) * (-1875.793) (-1872.851) (-1870.824) [-1872.567] -- 0:03:34
380000 -- (-1876.701) [-1871.962] (-1875.070) (-1874.352) * [-1869.588] (-1873.845) (-1866.511) (-1878.599) -- 0:03:33
Average standard deviation of split frequencies: 0.009794
381000 -- (-1869.500) [-1873.024] (-1865.836) (-1871.689) * [-1870.126] (-1870.539) (-1875.038) (-1882.250) -- 0:03:32
382000 -- [-1867.528] (-1873.012) (-1873.941) (-1870.568) * (-1884.597) (-1873.051) (-1881.763) [-1870.801] -- 0:03:33
383000 -- (-1871.111) (-1877.940) [-1867.641] (-1875.750) * (-1874.649) (-1881.395) [-1870.529] (-1875.806) -- 0:03:32
384000 -- (-1879.029) (-1877.414) [-1866.903] (-1874.607) * (-1868.760) (-1875.419) [-1872.451] (-1867.739) -- 0:03:31
385000 -- (-1869.780) (-1870.017) (-1874.184) [-1875.872] * (-1874.042) (-1875.383) (-1876.392) [-1866.675] -- 0:03:32
Average standard deviation of split frequencies: 0.009770
386000 -- (-1871.858) (-1880.282) [-1870.859] (-1868.708) * (-1868.087) (-1872.827) (-1869.257) [-1873.822] -- 0:03:31
387000 -- (-1884.225) (-1875.835) (-1876.936) [-1867.411] * (-1875.216) (-1867.889) [-1872.619] (-1886.481) -- 0:03:30
388000 -- (-1868.673) (-1869.877) [-1872.435] (-1873.604) * (-1873.972) (-1871.963) (-1874.513) [-1865.578] -- 0:03:31
389000 -- (-1879.973) (-1873.653) [-1883.391] (-1874.634) * (-1875.595) (-1868.398) (-1875.504) [-1868.169] -- 0:03:30
390000 -- (-1868.723) (-1868.597) [-1872.596] (-1876.740) * (-1881.889) (-1875.109) [-1876.624] (-1870.360) -- 0:03:29
Average standard deviation of split frequencies: 0.008447
391000 -- (-1872.482) (-1871.073) (-1877.893) [-1874.635] * (-1875.461) (-1876.529) [-1870.575] (-1869.910) -- 0:03:30
392000 -- (-1874.786) (-1877.615) (-1885.763) [-1868.617] * (-1871.251) (-1866.290) [-1871.563] (-1870.258) -- 0:03:29
393000 -- (-1871.278) [-1866.249] (-1881.823) (-1873.658) * [-1878.985] (-1872.320) (-1867.969) (-1861.684) -- 0:03:28
394000 -- (-1871.707) [-1878.897] (-1870.976) (-1875.052) * (-1870.762) [-1878.702] (-1877.829) (-1866.605) -- 0:03:29
395000 -- (-1871.850) [-1873.976] (-1885.213) (-1866.375) * [-1869.847] (-1867.234) (-1876.833) (-1872.781) -- 0:03:28
Average standard deviation of split frequencies: 0.008658
396000 -- [-1871.197] (-1867.573) (-1875.827) (-1870.702) * [-1875.126] (-1874.916) (-1870.037) (-1868.206) -- 0:03:27
397000 -- (-1872.420) (-1876.576) [-1870.853] (-1871.021) * (-1873.629) (-1870.373) (-1867.370) [-1873.362] -- 0:03:28
398000 -- (-1882.939) (-1875.579) (-1876.627) [-1874.157] * (-1876.941) (-1873.601) (-1868.828) [-1870.075] -- 0:03:27
399000 -- (-1882.921) (-1867.385) [-1866.891] (-1882.137) * (-1875.261) (-1872.611) [-1869.499] (-1874.320) -- 0:03:27
400000 -- (-1882.497) (-1877.359) [-1868.758] (-1880.041) * [-1867.215] (-1878.047) (-1874.324) (-1866.809) -- 0:03:27
Average standard deviation of split frequencies: 0.009733
401000 -- (-1875.912) [-1874.236] (-1881.748) (-1875.481) * (-1878.754) [-1872.273] (-1866.305) (-1875.158) -- 0:03:26
402000 -- [-1876.603] (-1877.908) (-1867.476) (-1879.121) * (-1875.359) (-1874.479) (-1867.067) [-1884.733] -- 0:03:26
403000 -- [-1866.101] (-1874.518) (-1875.532) (-1871.328) * (-1876.074) (-1869.588) [-1866.438] (-1872.775) -- 0:03:25
404000 -- (-1879.321) (-1873.941) [-1875.686] (-1882.213) * (-1873.118) (-1873.996) [-1869.188] (-1871.897) -- 0:03:25
405000 -- [-1875.454] (-1875.705) (-1875.123) (-1866.279) * [-1875.803] (-1879.243) (-1871.102) (-1876.117) -- 0:03:25
Average standard deviation of split frequencies: 0.009711
406000 -- (-1871.028) (-1871.959) (-1874.528) [-1867.397] * [-1873.514] (-1873.331) (-1865.306) (-1871.578) -- 0:03:24
407000 -- (-1875.065) [-1870.767] (-1876.817) (-1873.337) * (-1875.294) [-1872.287] (-1872.278) (-1871.854) -- 0:03:23
408000 -- (-1876.975) (-1877.608) (-1872.527) [-1877.573] * [-1884.575] (-1878.999) (-1873.801) (-1866.824) -- 0:03:24
409000 -- (-1877.418) (-1874.360) [-1863.252] (-1867.590) * (-1875.299) (-1876.441) (-1878.011) [-1873.200] -- 0:03:23
410000 -- [-1864.851] (-1879.868) (-1867.188) (-1869.417) * (-1867.633) [-1866.860] (-1877.334) (-1873.319) -- 0:03:22
Average standard deviation of split frequencies: 0.010749
411000 -- (-1873.876) (-1873.419) [-1871.425] (-1881.102) * (-1876.197) (-1868.226) [-1868.825] (-1895.148) -- 0:03:23
412000 -- [-1882.710] (-1870.396) (-1879.728) (-1870.282) * (-1876.259) [-1869.020] (-1871.691) (-1878.613) -- 0:03:22
413000 -- [-1879.679] (-1879.557) (-1874.456) (-1874.297) * (-1871.419) (-1870.664) (-1875.049) [-1872.119] -- 0:03:21
414000 -- [-1867.935] (-1880.051) (-1877.949) (-1873.701) * [-1871.732] (-1881.514) (-1871.980) (-1875.202) -- 0:03:22
415000 -- (-1867.492) [-1869.136] (-1871.115) (-1868.553) * [-1870.238] (-1870.333) (-1873.253) (-1864.685) -- 0:03:21
Average standard deviation of split frequencies: 0.009478
416000 -- (-1884.063) (-1868.606) (-1875.583) [-1874.466] * (-1872.735) (-1874.114) [-1868.108] (-1878.323) -- 0:03:20
417000 -- [-1869.183] (-1878.908) (-1870.578) (-1876.759) * (-1873.173) (-1883.988) [-1875.039] (-1869.476) -- 0:03:21
418000 -- (-1875.822) (-1879.325) [-1870.716] (-1873.937) * [-1874.460] (-1872.517) (-1888.678) (-1866.730) -- 0:03:20
419000 -- (-1872.061) [-1870.363] (-1875.121) (-1886.005) * (-1873.205) (-1873.681) (-1876.497) [-1864.760] -- 0:03:19
420000 -- (-1879.481) (-1880.554) [-1870.911] (-1882.432) * (-1875.967) [-1867.313] (-1872.424) (-1877.259) -- 0:03:20
Average standard deviation of split frequencies: 0.009984
421000 -- [-1867.630] (-1874.570) (-1867.609) (-1869.858) * (-1880.077) (-1869.462) [-1874.535] (-1876.204) -- 0:03:19
422000 -- (-1875.718) (-1872.966) [-1868.165] (-1866.429) * (-1872.153) (-1874.497) [-1874.124] (-1873.848) -- 0:03:18
423000 -- [-1873.593] (-1874.014) (-1874.017) (-1870.418) * (-1881.124) (-1868.274) [-1877.423] (-1872.866) -- 0:03:19
424000 -- (-1874.641) (-1873.661) (-1861.972) [-1868.766] * (-1867.778) [-1871.898] (-1884.602) (-1878.383) -- 0:03:18
425000 -- [-1862.822] (-1875.388) (-1863.141) (-1885.939) * (-1869.708) [-1876.182] (-1870.719) (-1869.443) -- 0:03:17
Average standard deviation of split frequencies: 0.009154
426000 -- (-1869.240) [-1875.582] (-1877.016) (-1874.486) * (-1878.238) [-1872.119] (-1873.521) (-1871.933) -- 0:03:18
427000 -- (-1868.348) (-1874.914) [-1870.823] (-1880.689) * (-1877.112) [-1865.521] (-1877.365) (-1879.211) -- 0:03:17
428000 -- [-1867.267] (-1865.986) (-1874.949) (-1888.640) * [-1867.752] (-1866.510) (-1868.073) (-1881.694) -- 0:03:16
429000 -- [-1870.581] (-1875.213) (-1871.852) (-1882.839) * [-1878.731] (-1882.634) (-1877.165) (-1885.408) -- 0:03:16
430000 -- (-1878.769) (-1872.019) (-1877.962) [-1870.137] * (-1877.675) (-1877.697) [-1870.347] (-1877.609) -- 0:03:16
Average standard deviation of split frequencies: 0.007861
431000 -- [-1876.281] (-1875.555) (-1890.876) (-1875.575) * (-1877.355) (-1873.274) (-1880.902) [-1868.570] -- 0:03:16
432000 -- [-1877.685] (-1872.811) (-1872.133) (-1873.328) * (-1873.756) (-1868.219) (-1880.582) [-1866.145] -- 0:03:15
433000 -- (-1886.523) (-1876.925) (-1876.082) [-1864.085] * (-1869.229) (-1879.462) [-1877.369] (-1868.906) -- 0:03:15
434000 -- (-1872.078) (-1873.135) (-1871.507) [-1870.322] * [-1870.961] (-1878.994) (-1868.935) (-1873.356) -- 0:03:15
435000 -- (-1889.839) (-1867.950) [-1867.863] (-1873.618) * [-1870.601] (-1877.711) (-1875.050) (-1877.700) -- 0:03:14
Average standard deviation of split frequencies: 0.007175
436000 -- (-1870.754) (-1872.781) (-1873.204) [-1873.551] * (-1871.409) [-1865.841] (-1872.663) (-1881.318) -- 0:03:14
437000 -- [-1867.364] (-1885.290) (-1881.815) (-1865.211) * (-1873.294) [-1876.389] (-1873.049) (-1874.585) -- 0:03:14
438000 -- (-1872.823) (-1867.833) [-1876.528] (-1866.314) * (-1875.267) [-1876.245] (-1871.639) (-1878.068) -- 0:03:13
439000 -- (-1867.596) (-1879.469) (-1887.337) [-1868.876] * [-1866.616] (-1884.812) (-1866.313) (-1869.240) -- 0:03:12
440000 -- (-1872.019) (-1878.764) (-1872.133) [-1874.655] * (-1868.368) (-1870.315) (-1873.627) [-1874.086] -- 0:03:13
Average standard deviation of split frequencies: 0.006808
441000 -- (-1876.458) [-1869.802] (-1870.495) (-1877.646) * [-1865.269] (-1875.319) (-1872.471) (-1871.659) -- 0:03:12
442000 -- (-1885.826) (-1871.513) (-1877.203) [-1866.309] * (-1879.773) (-1886.115) [-1878.255] (-1866.005) -- 0:03:11
443000 -- (-1874.554) (-1881.255) [-1869.905] (-1880.315) * (-1878.929) (-1879.918) (-1870.760) [-1870.778] -- 0:03:12
444000 -- (-1870.777) (-1879.666) [-1874.698] (-1880.339) * [-1865.638] (-1870.766) (-1876.183) (-1878.911) -- 0:03:11
445000 -- (-1874.022) [-1874.725] (-1872.733) (-1867.590) * (-1870.801) (-1874.691) [-1869.161] (-1880.925) -- 0:03:10
Average standard deviation of split frequencies: 0.007879
446000 -- (-1869.554) (-1870.877) (-1879.553) [-1871.475] * [-1868.280] (-1868.915) (-1868.552) (-1869.669) -- 0:03:11
447000 -- (-1868.604) [-1870.305] (-1873.582) (-1875.687) * (-1872.127) [-1872.057] (-1876.919) (-1879.017) -- 0:03:10
448000 -- (-1871.731) (-1870.885) (-1867.491) [-1877.538] * (-1872.309) (-1874.819) [-1873.350] (-1876.541) -- 0:03:09
449000 -- (-1872.167) (-1875.668) [-1875.336] (-1883.356) * (-1872.223) (-1868.788) (-1876.106) [-1870.067] -- 0:03:10
450000 -- (-1875.715) (-1873.270) [-1868.484] (-1876.270) * (-1873.144) (-1871.337) (-1877.373) [-1865.326] -- 0:03:09
Average standard deviation of split frequencies: 0.007417
451000 -- (-1870.035) [-1871.791] (-1877.409) (-1875.320) * (-1879.069) (-1872.568) [-1865.189] (-1866.563) -- 0:03:08
452000 -- (-1869.636) (-1872.763) [-1869.788] (-1865.077) * [-1874.044] (-1871.499) (-1873.239) (-1876.683) -- 0:03:09
453000 -- [-1862.280] (-1865.230) (-1863.143) (-1868.165) * (-1871.352) (-1868.789) [-1865.790] (-1874.538) -- 0:03:08
454000 -- [-1877.812] (-1872.757) (-1864.801) (-1872.029) * (-1873.123) (-1871.837) [-1872.186] (-1875.804) -- 0:03:07
455000 -- (-1877.243) [-1870.544] (-1875.998) (-1876.754) * (-1876.313) [-1866.728] (-1874.553) (-1877.491) -- 0:03:08
Average standard deviation of split frequencies: 0.008176
456000 -- (-1872.435) [-1866.447] (-1872.450) (-1871.570) * (-1879.321) [-1866.726] (-1870.640) (-1866.937) -- 0:03:07
457000 -- (-1873.929) (-1880.978) [-1870.047] (-1872.191) * (-1865.879) (-1864.104) (-1870.004) [-1875.618] -- 0:03:06
458000 -- (-1868.952) [-1868.443] (-1881.448) (-1883.975) * [-1866.320] (-1867.858) (-1872.157) (-1863.964) -- 0:03:06
459000 -- [-1869.756] (-1871.614) (-1869.906) (-1883.921) * (-1873.027) (-1869.154) (-1878.371) [-1880.981] -- 0:03:06
460000 -- (-1875.647) [-1863.651] (-1867.710) (-1880.795) * (-1874.631) [-1880.828] (-1882.444) (-1884.480) -- 0:03:06
Average standard deviation of split frequencies: 0.007814
461000 -- (-1875.546) [-1867.279] (-1875.693) (-1873.319) * [-1871.838] (-1870.859) (-1874.083) (-1867.042) -- 0:03:05
462000 -- (-1879.200) [-1867.920] (-1873.406) (-1879.443) * (-1870.976) (-1875.020) [-1866.015] (-1878.432) -- 0:03:05
463000 -- [-1872.672] (-1869.881) (-1876.482) (-1872.207) * (-1864.791) [-1870.657] (-1875.147) (-1877.312) -- 0:03:05
464000 -- (-1877.031) [-1867.179] (-1865.955) (-1871.390) * (-1872.460) (-1872.642) (-1865.975) [-1868.493] -- 0:03:04
465000 -- (-1872.350) (-1867.047) [-1871.612] (-1874.997) * [-1867.975] (-1885.812) (-1871.389) (-1872.405) -- 0:03:04
Average standard deviation of split frequencies: 0.007173
466000 -- [-1873.714] (-1871.177) (-1881.666) (-1884.534) * (-1870.621) [-1880.953] (-1870.842) (-1868.976) -- 0:03:04
467000 -- (-1873.490) (-1877.260) (-1869.838) [-1880.243] * (-1873.524) (-1877.625) (-1868.512) [-1875.980] -- 0:03:03
468000 -- (-1881.835) (-1877.287) [-1872.432] (-1875.163) * (-1877.382) (-1872.850) [-1868.157] (-1878.689) -- 0:03:03
469000 -- (-1871.866) (-1872.006) [-1873.473] (-1880.447) * (-1866.853) (-1885.516) (-1867.217) [-1868.197] -- 0:03:03
470000 -- (-1873.895) (-1878.725) [-1872.072] (-1873.491) * (-1873.886) [-1870.363] (-1874.395) (-1873.637) -- 0:03:02
Average standard deviation of split frequencies: 0.007284
471000 -- (-1867.940) (-1871.705) (-1866.625) [-1875.595] * (-1869.445) (-1886.411) [-1871.899] (-1884.215) -- 0:03:01
472000 -- [-1876.681] (-1870.892) (-1871.146) (-1873.410) * (-1874.094) (-1865.857) [-1865.963] (-1872.758) -- 0:03:02
473000 -- (-1874.510) (-1869.026) (-1867.673) [-1865.334] * [-1871.033] (-1876.283) (-1868.736) (-1874.043) -- 0:03:01
474000 -- (-1871.871) (-1871.613) [-1866.730] (-1868.820) * (-1881.785) (-1881.295) (-1876.723) [-1864.605] -- 0:03:00
475000 -- (-1884.019) (-1874.297) (-1867.800) [-1873.064] * (-1869.170) (-1874.067) (-1876.387) [-1873.030] -- 0:03:01
Average standard deviation of split frequencies: 0.007112
476000 -- (-1880.897) (-1877.996) (-1873.825) [-1868.066] * [-1871.290] (-1875.666) (-1877.744) (-1868.657) -- 0:03:00
477000 -- [-1879.853] (-1869.469) (-1868.307) (-1870.129) * (-1868.340) (-1874.492) (-1880.904) [-1864.954] -- 0:02:59
478000 -- (-1876.263) (-1877.072) (-1875.748) [-1875.252] * [-1866.739] (-1868.415) (-1873.089) (-1868.919) -- 0:03:00
479000 -- (-1875.344) (-1865.792) [-1866.386] (-1880.517) * (-1872.680) (-1863.955) [-1871.014] (-1868.386) -- 0:02:59
480000 -- (-1875.916) (-1879.406) (-1868.431) [-1871.523] * [-1872.530] (-1869.947) (-1877.343) (-1869.575) -- 0:02:58
Average standard deviation of split frequencies: 0.006598
481000 -- (-1871.785) (-1874.311) [-1865.778] (-1877.144) * (-1884.757) [-1872.080] (-1886.452) (-1870.176) -- 0:02:59
482000 -- (-1877.209) (-1878.706) (-1872.758) [-1870.113] * [-1871.429] (-1866.683) (-1875.496) (-1871.692) -- 0:02:58
483000 -- [-1873.440] (-1868.909) (-1878.596) (-1870.191) * (-1888.077) (-1864.363) (-1875.515) [-1875.544] -- 0:02:57
484000 -- (-1884.450) [-1867.726] (-1871.479) (-1868.934) * (-1889.408) [-1871.176] (-1875.113) (-1865.677) -- 0:02:58
485000 -- (-1871.093) [-1873.841] (-1866.180) (-1875.041) * (-1878.565) (-1870.084) [-1871.422] (-1869.684) -- 0:02:57
Average standard deviation of split frequencies: 0.005996
486000 -- (-1884.004) (-1867.966) (-1878.798) [-1865.763] * (-1881.986) (-1876.860) (-1870.845) [-1872.403] -- 0:02:56
487000 -- (-1867.015) (-1870.365) (-1876.167) [-1867.034] * [-1866.091] (-1874.715) (-1869.802) (-1871.666) -- 0:02:56
488000 -- [-1876.101] (-1875.680) (-1867.751) (-1870.030) * (-1867.114) (-1874.253) (-1870.128) [-1868.189] -- 0:02:56
489000 -- (-1880.888) [-1873.637] (-1869.893) (-1878.269) * (-1871.596) (-1867.912) (-1868.289) [-1866.571] -- 0:02:55
490000 -- (-1875.319) (-1873.873) [-1871.465] (-1869.600) * (-1869.339) (-1865.623) [-1873.529] (-1866.430) -- 0:02:55
Average standard deviation of split frequencies: 0.006201
491000 -- [-1865.701] (-1866.129) (-1878.377) (-1873.017) * (-1873.550) (-1881.535) [-1873.123] (-1876.217) -- 0:02:55
492000 -- (-1870.915) (-1872.020) [-1879.608] (-1876.911) * (-1867.027) (-1874.941) (-1871.046) [-1872.969] -- 0:02:54
493000 -- (-1871.659) (-1874.021) (-1867.816) [-1870.882] * (-1870.234) (-1864.865) [-1873.208] (-1876.947) -- 0:02:54
494000 -- (-1868.312) [-1873.686] (-1868.627) (-1878.280) * (-1868.891) [-1871.078] (-1870.437) (-1875.431) -- 0:02:54
495000 -- [-1869.835] (-1872.157) (-1877.005) (-1871.950) * (-1872.730) [-1869.251] (-1876.438) (-1869.760) -- 0:02:54
Average standard deviation of split frequencies: 0.005530
496000 -- [-1868.643] (-1873.972) (-1870.752) (-1873.266) * (-1873.427) [-1869.498] (-1867.295) (-1870.187) -- 0:02:53
497000 -- (-1876.602) (-1866.732) [-1875.889] (-1877.653) * [-1876.681] (-1871.665) (-1874.716) (-1871.909) -- 0:02:53
498000 -- (-1878.631) [-1870.298] (-1867.824) (-1885.742) * (-1868.431) [-1869.197] (-1871.282) (-1868.358) -- 0:02:53
499000 -- (-1874.445) (-1867.312) (-1869.247) [-1870.801] * [-1863.119] (-1870.023) (-1878.364) (-1873.495) -- 0:02:52
500000 -- (-1879.053) (-1870.085) (-1880.643) [-1873.559] * (-1878.986) (-1872.864) (-1874.523) [-1868.163] -- 0:02:52
Average standard deviation of split frequencies: 0.005649
501000 -- (-1876.380) [-1866.152] (-1883.574) (-1872.972) * (-1869.591) [-1871.190] (-1869.978) (-1875.560) -- 0:02:52
502000 -- (-1869.382) (-1876.615) [-1876.892] (-1873.817) * (-1872.134) (-1867.627) [-1872.109] (-1870.826) -- 0:02:51
503000 -- (-1873.576) (-1875.674) (-1873.823) [-1875.456] * (-1868.653) (-1872.525) [-1870.059] (-1869.366) -- 0:02:50
504000 -- (-1872.249) (-1878.835) (-1872.550) [-1868.414] * [-1866.277] (-1871.386) (-1872.521) (-1867.606) -- 0:02:51
505000 -- (-1888.561) (-1869.337) (-1868.314) [-1868.811] * (-1869.427) [-1875.430] (-1873.525) (-1874.659) -- 0:02:50
Average standard deviation of split frequencies: 0.005082
506000 -- (-1873.054) (-1871.782) (-1868.417) [-1873.914] * (-1865.989) [-1870.808] (-1873.530) (-1867.347) -- 0:02:49
507000 -- (-1870.447) [-1865.971] (-1864.623) (-1872.832) * [-1870.724] (-1875.642) (-1871.903) (-1873.142) -- 0:02:50
508000 -- [-1864.457] (-1860.763) (-1869.861) (-1873.200) * (-1871.882) (-1866.612) [-1875.013] (-1868.380) -- 0:02:49
509000 -- [-1866.600] (-1865.597) (-1871.348) (-1874.617) * (-1867.706) [-1871.003] (-1872.381) (-1887.998) -- 0:02:48
510000 -- (-1874.980) (-1876.373) (-1883.474) [-1875.794] * (-1870.852) (-1874.395) [-1865.090] (-1868.531) -- 0:02:49
Average standard deviation of split frequencies: 0.005958
511000 -- [-1878.733] (-1880.075) (-1869.920) (-1873.412) * [-1871.477] (-1876.151) (-1878.304) (-1872.066) -- 0:02:48
512000 -- (-1885.552) (-1870.274) [-1863.440] (-1874.421) * (-1872.331) (-1867.969) (-1869.592) [-1872.298] -- 0:02:47
513000 -- (-1882.607) (-1877.488) (-1875.100) [-1875.420] * (-1874.856) [-1874.273] (-1876.623) (-1874.723) -- 0:02:48
514000 -- (-1876.728) (-1872.647) [-1870.244] (-1870.425) * [-1870.686] (-1875.123) (-1870.836) (-1876.118) -- 0:02:47
515000 -- [-1874.245] (-1885.308) (-1886.479) (-1871.052) * (-1867.180) (-1866.837) (-1866.583) [-1872.475] -- 0:02:46
Average standard deviation of split frequencies: 0.006063
516000 -- (-1874.489) (-1870.754) [-1876.436] (-1869.855) * (-1869.232) [-1878.079] (-1870.658) (-1873.911) -- 0:02:46
517000 -- [-1870.537] (-1873.799) (-1870.871) (-1876.618) * (-1872.917) (-1879.477) [-1865.292] (-1874.083) -- 0:02:46
518000 -- (-1878.729) (-1871.993) [-1877.784] (-1877.791) * (-1876.134) (-1869.029) [-1869.053] (-1882.801) -- 0:02:45
519000 -- (-1871.971) (-1873.771) [-1867.555] (-1875.770) * (-1869.102) (-1878.802) [-1875.490] (-1884.913) -- 0:02:45
520000 -- [-1880.883] (-1865.774) (-1877.240) (-1879.139) * (-1876.475) [-1875.040] (-1866.470) (-1873.252) -- 0:02:45
Average standard deviation of split frequencies: 0.006420
521000 -- (-1874.077) (-1874.930) (-1869.507) [-1877.465] * [-1873.662] (-1872.429) (-1876.368) (-1892.455) -- 0:02:44
522000 -- (-1868.029) (-1871.054) [-1870.396] (-1871.055) * [-1877.926] (-1868.078) (-1875.594) (-1894.862) -- 0:02:44
523000 -- (-1868.574) [-1868.005] (-1877.229) (-1876.065) * [-1872.325] (-1865.310) (-1886.678) (-1871.903) -- 0:02:44
524000 -- (-1874.026) (-1869.727) (-1871.850) [-1864.167] * (-1869.938) (-1875.059) (-1878.814) [-1873.002] -- 0:02:43
525000 -- [-1869.144] (-1877.404) (-1870.609) (-1872.133) * [-1868.568] (-1872.639) (-1881.270) (-1869.541) -- 0:02:43
Average standard deviation of split frequencies: 0.007170
526000 -- [-1869.493] (-1866.351) (-1866.590) (-1869.123) * [-1874.488] (-1864.535) (-1872.909) (-1875.947) -- 0:02:43
527000 -- (-1875.945) [-1877.985] (-1877.014) (-1874.107) * [-1868.016] (-1872.689) (-1866.826) (-1870.364) -- 0:02:42
528000 -- (-1877.144) (-1870.859) [-1872.951] (-1872.960) * (-1881.518) (-1882.337) (-1880.759) [-1862.975] -- 0:02:42
529000 -- (-1879.302) (-1885.083) [-1867.011] (-1876.873) * [-1864.277] (-1870.996) (-1875.965) (-1872.339) -- 0:02:42
530000 -- (-1877.236) [-1876.591] (-1876.850) (-1872.102) * (-1876.550) (-1867.930) (-1878.384) [-1875.237] -- 0:02:41
Average standard deviation of split frequencies: 0.007026
531000 -- [-1868.430] (-1881.811) (-1870.735) (-1872.249) * (-1874.033) (-1878.301) (-1883.907) [-1867.600] -- 0:02:41
532000 -- (-1869.632) (-1878.950) [-1867.707] (-1875.684) * (-1870.468) (-1890.207) (-1872.827) [-1872.662] -- 0:02:40
533000 -- [-1876.607] (-1865.146) (-1871.269) (-1874.817) * (-1867.515) (-1875.118) [-1872.632] (-1879.077) -- 0:02:41
534000 -- (-1872.726) (-1872.686) (-1870.350) [-1871.205] * [-1863.059] (-1864.583) (-1869.640) (-1875.207) -- 0:02:40
535000 -- (-1872.155) [-1869.302] (-1873.840) (-1877.037) * (-1862.498) (-1879.949) [-1870.443] (-1873.212) -- 0:02:39
Average standard deviation of split frequencies: 0.006956
536000 -- [-1869.950] (-1867.542) (-1869.595) (-1865.415) * (-1869.571) (-1877.413) [-1873.762] (-1874.612) -- 0:02:40
537000 -- (-1866.737) (-1868.108) (-1872.801) [-1867.883] * (-1869.292) (-1881.106) [-1866.597] (-1867.898) -- 0:02:39
538000 -- [-1871.381] (-1878.131) (-1885.547) (-1872.750) * (-1868.380) (-1869.885) [-1873.889] (-1876.730) -- 0:02:38
539000 -- (-1875.381) (-1875.737) (-1871.864) [-1867.659] * (-1873.675) [-1868.175] (-1881.378) (-1869.548) -- 0:02:39
540000 -- (-1877.845) [-1876.953] (-1878.112) (-1868.420) * (-1870.565) (-1880.733) (-1872.235) [-1872.400] -- 0:02:38
Average standard deviation of split frequencies: 0.006817
541000 -- (-1869.073) (-1868.365) (-1869.226) [-1863.655] * (-1874.826) (-1871.431) (-1880.869) [-1871.344] -- 0:02:37
542000 -- [-1870.017] (-1875.827) (-1873.066) (-1871.124) * (-1868.868) (-1872.222) (-1880.948) [-1867.410] -- 0:02:38
543000 -- [-1863.743] (-1869.143) (-1875.684) (-1863.669) * (-1869.705) (-1881.163) [-1871.530] (-1870.413) -- 0:02:37
544000 -- (-1866.665) (-1867.486) [-1866.340] (-1873.249) * (-1867.860) [-1867.985] (-1869.275) (-1869.280) -- 0:02:36
545000 -- (-1868.714) (-1875.744) (-1875.830) [-1871.978] * [-1865.161] (-1876.100) (-1875.588) (-1871.332) -- 0:02:36
Average standard deviation of split frequencies: 0.007221
546000 -- (-1871.039) (-1865.726) (-1875.359) [-1870.626] * (-1880.386) [-1874.936] (-1878.812) (-1875.247) -- 0:02:36
547000 -- (-1875.615) (-1867.412) [-1872.373] (-1871.084) * (-1872.358) (-1883.306) [-1870.827] (-1871.760) -- 0:02:35
548000 -- (-1872.504) (-1873.952) (-1873.978) [-1872.573] * (-1885.057) (-1870.158) (-1876.283) [-1870.085] -- 0:02:35
549000 -- [-1865.961] (-1872.788) (-1880.980) (-1869.908) * (-1875.004) (-1866.692) (-1872.647) [-1871.802] -- 0:02:35
550000 -- (-1866.036) (-1872.504) (-1875.209) [-1867.650] * [-1863.154] (-1878.438) (-1874.090) (-1870.797) -- 0:02:34
Average standard deviation of split frequencies: 0.007082
551000 -- (-1873.960) [-1869.087] (-1883.272) (-1875.119) * [-1876.966] (-1876.584) (-1880.298) (-1866.354) -- 0:02:34
552000 -- (-1876.715) (-1871.689) (-1885.457) [-1867.877] * (-1866.535) [-1870.367] (-1883.449) (-1874.019) -- 0:02:34
553000 -- (-1872.406) [-1870.655] (-1872.959) (-1871.999) * [-1869.103] (-1872.204) (-1867.076) (-1881.398) -- 0:02:33
554000 -- (-1880.956) (-1874.766) (-1880.220) [-1872.100] * (-1876.110) (-1880.169) (-1870.630) [-1870.747] -- 0:02:33
555000 -- (-1871.384) (-1873.836) (-1873.387) [-1876.862] * (-1870.160) [-1876.785] (-1879.173) (-1877.552) -- 0:02:33
Average standard deviation of split frequencies: 0.006397
556000 -- (-1864.770) (-1876.357) [-1870.155] (-1880.311) * (-1870.694) [-1871.048] (-1870.921) (-1871.544) -- 0:02:32
557000 -- (-1874.335) (-1874.412) (-1878.486) [-1871.582] * (-1873.071) (-1872.192) (-1871.613) [-1874.337] -- 0:02:32
558000 -- (-1872.699) (-1883.119) [-1868.273] (-1872.394) * (-1878.768) (-1870.082) [-1862.983] (-1877.696) -- 0:02:32
559000 -- (-1867.399) (-1880.991) [-1868.265] (-1877.155) * (-1880.523) [-1869.489] (-1867.589) (-1870.260) -- 0:02:31
560000 -- [-1869.638] (-1885.287) (-1876.198) (-1872.920) * (-1878.897) [-1871.917] (-1876.353) (-1870.160) -- 0:02:31
Average standard deviation of split frequencies: 0.005962
561000 -- (-1871.481) [-1866.013] (-1879.117) (-1870.023) * (-1870.947) [-1866.851] (-1879.569) (-1869.779) -- 0:02:31
562000 -- (-1870.058) (-1867.752) [-1875.396] (-1868.534) * (-1871.387) (-1871.608) [-1869.680] (-1874.985) -- 0:02:30
563000 -- (-1870.720) (-1867.815) [-1873.699] (-1878.606) * (-1871.232) (-1883.449) (-1874.534) [-1866.721] -- 0:02:30
564000 -- (-1871.440) (-1872.080) (-1872.405) [-1869.737] * (-1871.625) (-1872.893) (-1879.052) [-1869.889] -- 0:02:29
565000 -- [-1866.994] (-1871.242) (-1876.841) (-1872.624) * (-1867.027) [-1869.238] (-1885.444) (-1873.298) -- 0:02:29
Average standard deviation of split frequencies: 0.005527
566000 -- (-1873.975) [-1866.784] (-1879.220) (-1872.135) * (-1872.438) (-1876.637) (-1883.296) [-1867.387] -- 0:02:29
567000 -- (-1879.619) [-1866.323] (-1880.095) (-1865.709) * (-1878.600) (-1870.426) [-1877.426] (-1877.782) -- 0:02:28
568000 -- (-1871.038) (-1871.822) (-1871.671) [-1874.386] * (-1870.108) (-1873.015) [-1864.987] (-1871.688) -- 0:02:28
569000 -- (-1868.028) (-1866.232) (-1875.911) [-1868.592] * (-1875.618) (-1869.380) [-1867.953] (-1876.961) -- 0:02:28
570000 -- [-1873.709] (-1867.676) (-1874.519) (-1877.748) * (-1875.323) (-1870.882) (-1869.606) [-1867.927] -- 0:02:27
Average standard deviation of split frequencies: 0.005407
571000 -- (-1870.438) [-1871.655] (-1873.709) (-1882.173) * (-1873.080) (-1871.177) (-1890.570) [-1868.012] -- 0:02:27
572000 -- [-1870.476] (-1869.882) (-1875.251) (-1868.953) * (-1875.111) (-1880.427) [-1873.239] (-1874.374) -- 0:02:27
573000 -- (-1879.863) [-1866.252] (-1871.666) (-1871.992) * (-1866.722) [-1872.008] (-1874.932) (-1886.190) -- 0:02:26
574000 -- [-1867.915] (-1869.285) (-1875.229) (-1874.747) * (-1869.369) [-1867.299] (-1869.420) (-1878.428) -- 0:02:26
575000 -- (-1870.856) (-1873.283) (-1873.257) [-1868.347] * (-1878.894) (-1873.811) (-1872.751) [-1877.590] -- 0:02:26
Average standard deviation of split frequencies: 0.005208
576000 -- (-1865.688) (-1871.882) (-1876.486) [-1868.019] * (-1873.269) [-1872.768] (-1885.786) (-1872.056) -- 0:02:25
577000 -- [-1871.328] (-1867.944) (-1872.324) (-1868.957) * (-1874.869) (-1878.921) (-1871.713) [-1872.661] -- 0:02:25
578000 -- (-1890.757) (-1872.794) (-1868.314) [-1864.900] * (-1867.390) [-1869.591] (-1877.659) (-1872.622) -- 0:02:25
579000 -- (-1877.770) (-1871.541) [-1867.297] (-1878.437) * (-1869.849) (-1870.830) (-1879.922) [-1874.674] -- 0:02:24
580000 -- (-1869.563) [-1871.695] (-1868.258) (-1871.639) * (-1871.602) (-1878.067) (-1875.259) [-1863.797] -- 0:02:24
Average standard deviation of split frequencies: 0.004945
581000 -- (-1877.596) [-1868.718] (-1868.410) (-1873.362) * (-1865.538) (-1874.669) [-1875.248] (-1876.372) -- 0:02:24
582000 -- (-1874.057) (-1883.813) (-1870.121) [-1867.930] * (-1864.360) [-1872.360] (-1871.965) (-1888.600) -- 0:02:23
583000 -- (-1880.688) [-1873.508] (-1876.337) (-1877.506) * (-1865.971) (-1873.685) [-1872.554] (-1875.128) -- 0:02:23
584000 -- [-1869.228] (-1884.335) (-1870.539) (-1872.171) * [-1874.715] (-1867.520) (-1878.481) (-1879.984) -- 0:02:23
585000 -- (-1864.041) [-1867.325] (-1883.195) (-1873.999) * [-1872.536] (-1873.605) (-1869.626) (-1874.190) -- 0:02:22
Average standard deviation of split frequencies: 0.005485
586000 -- (-1877.961) (-1872.201) (-1870.702) [-1870.330] * (-1863.629) (-1882.659) [-1864.243] (-1872.937) -- 0:02:22
587000 -- (-1882.190) (-1879.854) [-1868.469] (-1867.704) * [-1870.505] (-1881.637) (-1871.710) (-1868.646) -- 0:02:22
588000 -- (-1872.905) (-1874.017) [-1871.981] (-1876.478) * (-1878.867) [-1870.124] (-1868.276) (-1876.964) -- 0:02:21
589000 -- (-1874.597) [-1867.135] (-1875.021) (-1873.126) * (-1879.679) (-1865.960) (-1871.988) [-1873.554] -- 0:02:21
590000 -- (-1862.323) (-1883.410) [-1869.761] (-1878.165) * (-1874.166) (-1878.932) (-1870.918) [-1872.511] -- 0:02:21
Average standard deviation of split frequencies: 0.006893
591000 -- (-1875.180) (-1874.816) [-1871.874] (-1865.613) * (-1869.694) [-1872.672] (-1868.298) (-1866.411) -- 0:02:20
592000 -- [-1867.273] (-1870.536) (-1865.361) (-1865.674) * [-1865.408] (-1871.662) (-1879.608) (-1880.012) -- 0:02:20
593000 -- (-1869.292) (-1878.753) (-1874.092) [-1872.360] * (-1872.103) (-1879.376) (-1875.982) [-1869.664] -- 0:02:20
594000 -- (-1866.955) (-1865.217) [-1872.437] (-1873.025) * [-1870.689] (-1876.097) (-1884.281) (-1882.019) -- 0:02:19
595000 -- (-1871.118) [-1880.818] (-1871.802) (-1873.245) * (-1869.449) (-1870.027) (-1885.608) [-1871.841] -- 0:02:19
Average standard deviation of split frequencies: 0.006759
596000 -- (-1870.416) [-1872.192] (-1872.923) (-1878.815) * (-1878.030) (-1868.397) [-1871.024] (-1873.076) -- 0:02:18
597000 -- (-1876.817) (-1873.393) (-1876.166) [-1864.031] * [-1877.427] (-1873.653) (-1874.774) (-1872.855) -- 0:02:18
598000 -- (-1873.960) (-1875.391) (-1867.244) [-1869.223] * (-1868.521) [-1868.608] (-1876.936) (-1874.382) -- 0:02:18
599000 -- (-1870.105) [-1873.909] (-1874.433) (-1866.273) * [-1863.553] (-1876.991) (-1873.988) (-1873.972) -- 0:02:17
600000 -- (-1873.780) [-1878.721] (-1880.187) (-1875.586) * (-1875.504) (-1873.002) (-1875.921) [-1869.717] -- 0:02:17
Average standard deviation of split frequencies: 0.006635
601000 -- (-1882.242) (-1877.495) [-1866.561] (-1867.452) * (-1873.581) [-1870.423] (-1873.208) (-1879.398) -- 0:02:17
602000 -- [-1867.215] (-1873.080) (-1872.669) (-1874.020) * (-1881.339) (-1877.691) [-1868.988] (-1868.698) -- 0:02:16
603000 -- (-1867.169) (-1879.321) (-1871.527) [-1877.185] * [-1873.945] (-1876.434) (-1871.105) (-1870.977) -- 0:02:16
604000 -- (-1865.843) (-1872.971) (-1876.729) [-1874.870] * (-1873.385) (-1875.131) [-1867.767] (-1869.860) -- 0:02:16
605000 -- (-1866.414) (-1869.435) [-1870.990] (-1881.233) * (-1872.469) [-1873.698] (-1873.159) (-1868.477) -- 0:02:15
Average standard deviation of split frequencies: 0.005445
606000 -- (-1881.682) (-1870.625) (-1876.514) [-1881.423] * (-1874.379) [-1867.825] (-1880.725) (-1872.452) -- 0:02:15
607000 -- (-1874.725) (-1866.713) [-1869.471] (-1880.962) * (-1870.687) [-1869.292] (-1874.691) (-1874.794) -- 0:02:15
608000 -- (-1872.637) (-1869.836) (-1875.465) [-1869.869] * (-1879.042) [-1866.700] (-1870.128) (-1873.525) -- 0:02:14
609000 -- [-1869.581] (-1877.108) (-1870.618) (-1874.067) * (-1872.148) [-1867.066] (-1879.582) (-1875.292) -- 0:02:14
610000 -- (-1870.433) (-1869.243) [-1873.517] (-1876.914) * [-1867.654] (-1870.689) (-1881.416) (-1876.492) -- 0:02:14
Average standard deviation of split frequencies: 0.005544
611000 -- (-1866.087) (-1870.912) [-1870.647] (-1870.635) * [-1866.635] (-1871.870) (-1874.210) (-1880.527) -- 0:02:13
612000 -- (-1868.663) [-1875.378] (-1878.067) (-1875.315) * (-1874.923) (-1868.764) [-1869.323] (-1868.185) -- 0:02:13
613000 -- (-1880.340) [-1871.838] (-1877.410) (-1873.736) * (-1876.816) (-1870.912) (-1865.895) [-1867.676] -- 0:02:13
614000 -- [-1872.311] (-1876.559) (-1876.104) (-1870.015) * [-1869.030] (-1872.672) (-1870.058) (-1878.114) -- 0:02:12
615000 -- (-1875.227) [-1876.242] (-1868.168) (-1873.998) * (-1873.192) (-1882.525) (-1876.839) [-1875.639] -- 0:02:12
Average standard deviation of split frequencies: 0.005218
616000 -- (-1873.443) (-1867.197) (-1870.503) [-1874.661] * (-1873.405) (-1882.237) [-1870.782] (-1875.119) -- 0:02:12
617000 -- (-1876.003) [-1869.130] (-1870.837) (-1871.064) * (-1873.183) [-1875.525] (-1879.078) (-1883.897) -- 0:02:12
618000 -- (-1865.572) (-1872.705) [-1868.808] (-1873.439) * [-1873.785] (-1877.201) (-1877.869) (-1879.087) -- 0:02:11
619000 -- (-1883.463) [-1871.975] (-1871.027) (-1866.140) * (-1869.621) [-1883.780] (-1881.761) (-1868.928) -- 0:02:11
620000 -- (-1869.439) [-1874.309] (-1865.238) (-1871.067) * (-1869.269) (-1879.477) [-1875.444] (-1876.388) -- 0:02:11
Average standard deviation of split frequencies: 0.005109
621000 -- (-1870.667) (-1872.957) (-1887.883) [-1871.072] * (-1884.438) [-1865.124] (-1871.081) (-1875.556) -- 0:02:10
622000 -- [-1866.423] (-1876.606) (-1868.166) (-1880.403) * [-1871.112] (-1872.070) (-1871.473) (-1880.316) -- 0:02:10
623000 -- (-1876.319) (-1870.217) [-1875.073] (-1871.671) * (-1878.674) [-1880.131] (-1878.766) (-1869.739) -- 0:02:10
624000 -- (-1870.967) (-1881.740) (-1869.973) [-1874.006] * [-1861.778] (-1876.784) (-1880.328) (-1869.340) -- 0:02:09
625000 -- [-1872.908] (-1878.796) (-1875.391) (-1875.207) * (-1870.801) [-1873.722] (-1879.936) (-1872.417) -- 0:02:09
Average standard deviation of split frequencies: 0.005477
626000 -- (-1877.484) (-1875.442) [-1881.278] (-1871.137) * (-1869.873) (-1879.112) [-1871.213] (-1869.793) -- 0:02:09
627000 -- (-1877.578) (-1871.849) [-1873.646] (-1862.053) * (-1876.942) (-1872.556) (-1875.853) [-1863.140] -- 0:02:08
628000 -- [-1866.832] (-1873.770) (-1871.569) (-1876.145) * (-1881.555) [-1875.382] (-1883.257) (-1867.993) -- 0:02:07
629000 -- (-1871.376) (-1872.053) [-1871.170] (-1876.053) * (-1880.449) (-1873.333) [-1865.171] (-1873.559) -- 0:02:07
630000 -- (-1866.919) [-1871.895] (-1874.483) (-1871.666) * [-1874.441] (-1873.865) (-1869.453) (-1870.045) -- 0:02:07
Average standard deviation of split frequencies: 0.005844
631000 -- (-1872.053) [-1868.828] (-1876.396) (-1873.019) * (-1877.317) [-1868.808] (-1867.970) (-1877.818) -- 0:02:06
632000 -- (-1876.138) [-1877.325] (-1870.203) (-1867.517) * (-1868.518) (-1873.797) [-1872.725] (-1875.446) -- 0:02:06
633000 -- (-1880.217) (-1869.673) (-1866.929) [-1873.484] * (-1881.233) (-1867.759) [-1866.108] (-1877.855) -- 0:02:06
634000 -- (-1872.165) [-1874.766] (-1880.960) (-1869.003) * (-1868.790) (-1868.327) (-1867.382) [-1871.029] -- 0:02:06
635000 -- (-1868.880) (-1864.322) (-1881.327) [-1867.522] * (-1871.808) (-1881.148) (-1879.143) [-1874.543] -- 0:02:05
Average standard deviation of split frequencies: 0.005188
636000 -- (-1881.414) [-1869.631] (-1870.054) (-1876.254) * [-1868.482] (-1868.919) (-1873.780) (-1873.550) -- 0:02:05
637000 -- [-1871.187] (-1875.833) (-1873.411) (-1872.331) * (-1876.733) [-1869.677] (-1873.482) (-1873.156) -- 0:02:05
638000 -- (-1870.002) [-1865.844] (-1881.560) (-1884.891) * (-1871.424) [-1871.146] (-1869.474) (-1884.004) -- 0:02:04
639000 -- (-1869.851) [-1864.724] (-1872.525) (-1877.079) * (-1875.745) [-1870.673] (-1868.691) (-1874.463) -- 0:02:04
640000 -- (-1866.601) (-1875.429) [-1872.375] (-1872.288) * (-1874.341) (-1869.683) [-1865.198] (-1869.828) -- 0:02:04
Average standard deviation of split frequencies: 0.004883
641000 -- (-1874.514) (-1870.076) [-1874.633] (-1884.468) * [-1873.789] (-1868.801) (-1876.898) (-1871.017) -- 0:02:03
642000 -- [-1864.816] (-1868.098) (-1876.737) (-1869.544) * (-1873.091) [-1870.122] (-1877.460) (-1872.706) -- 0:02:03
643000 -- (-1875.248) (-1862.669) (-1870.321) [-1869.742] * (-1863.662) [-1868.046] (-1872.692) (-1872.228) -- 0:02:03
644000 -- (-1876.407) (-1871.293) (-1864.118) [-1867.843] * (-1882.452) (-1872.442) (-1873.440) [-1871.383] -- 0:02:02
645000 -- (-1870.211) [-1870.597] (-1877.053) (-1868.396) * (-1867.663) (-1865.545) (-1873.388) [-1873.568] -- 0:02:02
Average standard deviation of split frequencies: 0.005108
646000 -- (-1870.120) [-1867.141] (-1875.563) (-1874.475) * (-1867.310) [-1869.355] (-1869.701) (-1881.098) -- 0:02:02
647000 -- (-1884.093) (-1871.124) [-1868.804] (-1869.465) * (-1870.637) (-1872.655) (-1873.028) [-1869.205] -- 0:02:01
648000 -- (-1875.719) (-1870.538) (-1866.232) [-1874.622] * [-1871.909] (-1872.512) (-1880.011) (-1869.634) -- 0:02:01
649000 -- (-1878.681) (-1871.718) [-1868.224] (-1868.265) * (-1877.549) [-1869.748] (-1869.694) (-1877.342) -- 0:02:01
650000 -- (-1867.134) (-1872.294) (-1876.936) [-1869.241] * [-1875.950] (-1871.713) (-1881.685) (-1872.738) -- 0:02:00
Average standard deviation of split frequencies: 0.005401
651000 -- (-1871.147) [-1868.627] (-1875.751) (-1876.013) * [-1873.739] (-1879.944) (-1879.771) (-1875.204) -- 0:02:00
652000 -- [-1870.776] (-1871.162) (-1869.831) (-1870.636) * (-1869.893) [-1884.021] (-1870.098) (-1876.794) -- 0:02:00
653000 -- (-1873.807) [-1875.097] (-1870.114) (-1877.157) * (-1874.141) [-1886.540] (-1871.318) (-1866.241) -- 0:01:59
654000 -- (-1875.518) (-1864.344) (-1871.502) [-1868.430] * (-1871.584) (-1874.551) (-1870.620) [-1864.612] -- 0:01:59
655000 -- (-1870.211) (-1870.136) (-1871.651) [-1881.495] * (-1880.745) (-1872.530) (-1875.443) [-1868.877] -- 0:01:59
Average standard deviation of split frequencies: 0.005553
656000 -- (-1873.092) [-1874.256] (-1873.162) (-1875.159) * (-1873.575) (-1861.408) [-1863.363] (-1872.598) -- 0:01:58
657000 -- (-1866.676) (-1871.083) (-1874.181) [-1872.264] * (-1868.580) (-1868.173) [-1872.046] (-1872.595) -- 0:01:57
658000 -- (-1869.511) [-1876.177] (-1872.725) (-1879.226) * [-1868.274] (-1879.791) (-1871.754) (-1868.460) -- 0:01:57
659000 -- [-1880.526] (-1870.774) (-1877.194) (-1869.710) * (-1875.723) (-1868.348) [-1868.176] (-1873.253) -- 0:01:57
660000 -- (-1870.677) [-1868.148] (-1874.161) (-1876.890) * (-1876.016) (-1871.014) [-1869.426] (-1872.377) -- 0:01:56
Average standard deviation of split frequencies: 0.006292
661000 -- (-1876.079) (-1874.941) [-1881.169] (-1877.624) * (-1875.067) [-1876.406] (-1879.781) (-1868.735) -- 0:01:56
662000 -- (-1872.024) (-1875.017) [-1873.630] (-1880.251) * [-1871.041] (-1875.427) (-1865.673) (-1874.212) -- 0:01:56
663000 -- (-1882.167) [-1871.308] (-1872.951) (-1879.891) * [-1870.650] (-1876.855) (-1871.728) (-1873.635) -- 0:01:55
664000 -- (-1872.561) [-1878.746] (-1868.487) (-1875.608) * (-1869.611) [-1872.041] (-1879.252) (-1878.286) -- 0:01:55
665000 -- (-1874.376) (-1876.644) [-1867.002] (-1872.062) * (-1868.677) (-1868.242) [-1870.354] (-1876.451) -- 0:01:55
Average standard deviation of split frequencies: 0.006885
666000 -- (-1881.916) (-1875.557) (-1873.862) [-1869.806] * [-1875.572] (-1869.060) (-1873.100) (-1871.226) -- 0:01:55
667000 -- (-1870.437) [-1873.491] (-1875.927) (-1883.897) * (-1870.420) [-1874.867] (-1869.676) (-1873.164) -- 0:01:54
668000 -- (-1874.686) (-1871.609) (-1875.966) [-1876.103] * [-1865.103] (-1867.487) (-1867.319) (-1869.023) -- 0:01:54
669000 -- [-1871.105] (-1873.563) (-1878.667) (-1874.123) * (-1876.511) (-1868.379) (-1876.477) [-1865.986] -- 0:01:54
670000 -- (-1880.516) [-1866.870] (-1873.728) (-1871.348) * (-1863.882) (-1867.405) (-1870.988) [-1869.771] -- 0:01:53
Average standard deviation of split frequencies: 0.007093
671000 -- [-1871.951] (-1868.234) (-1877.598) (-1873.826) * [-1868.817] (-1868.649) (-1876.275) (-1868.688) -- 0:01:53
672000 -- (-1882.940) [-1869.312] (-1877.619) (-1885.242) * [-1865.467] (-1870.438) (-1876.166) (-1880.541) -- 0:01:53
673000 -- [-1874.882] (-1872.231) (-1883.598) (-1872.518) * (-1870.499) [-1869.493] (-1879.724) (-1887.060) -- 0:01:52
674000 -- (-1868.404) (-1879.161) (-1871.287) [-1875.825] * (-1870.725) (-1873.308) (-1876.249) [-1869.513] -- 0:01:52
675000 -- [-1871.689] (-1878.329) (-1869.920) (-1870.416) * (-1870.799) (-1876.080) (-1878.811) [-1878.693] -- 0:01:52
Average standard deviation of split frequencies: 0.007037
676000 -- (-1876.115) (-1871.610) (-1879.394) [-1868.163] * (-1868.411) (-1876.209) (-1883.397) [-1870.717] -- 0:01:51
677000 -- (-1871.618) (-1870.936) [-1870.023] (-1872.274) * [-1871.809] (-1874.853) (-1869.471) (-1868.313) -- 0:01:51
678000 -- (-1871.307) (-1866.185) [-1867.501] (-1874.627) * (-1872.862) [-1877.334] (-1870.707) (-1880.606) -- 0:01:51
679000 -- (-1874.627) [-1868.710] (-1865.661) (-1872.640) * [-1875.837] (-1876.538) (-1877.698) (-1879.889) -- 0:01:50
680000 -- (-1875.817) [-1872.508] (-1866.104) (-1873.926) * [-1873.817] (-1870.172) (-1885.573) (-1875.399) -- 0:01:50
Average standard deviation of split frequencies: 0.007303
681000 -- [-1870.614] (-1879.206) (-1867.435) (-1884.014) * (-1869.683) (-1866.245) [-1874.717] (-1869.871) -- 0:01:50
682000 -- (-1879.085) (-1876.632) (-1873.314) [-1873.768] * (-1867.183) [-1868.015] (-1870.556) (-1869.407) -- 0:01:49
683000 -- (-1871.865) [-1868.888] (-1875.083) (-1882.379) * (-1877.204) (-1875.692) (-1873.644) [-1873.181] -- 0:01:49
684000 -- (-1871.894) [-1869.345] (-1872.881) (-1874.066) * (-1871.470) [-1870.718] (-1866.529) (-1870.978) -- 0:01:49
685000 -- (-1877.854) (-1875.436) (-1876.179) [-1870.412] * (-1886.037) [-1871.199] (-1871.252) (-1874.359) -- 0:01:48
Average standard deviation of split frequencies: 0.007184
686000 -- (-1867.318) (-1868.701) (-1869.671) [-1867.474] * (-1870.583) (-1877.074) (-1876.197) [-1877.017] -- 0:01:48
687000 -- (-1871.285) (-1877.208) (-1871.460) [-1868.673] * (-1887.407) (-1873.274) (-1866.918) [-1870.528] -- 0:01:47
688000 -- (-1869.022) (-1874.703) [-1871.394] (-1879.254) * (-1877.523) [-1869.531] (-1872.916) (-1870.491) -- 0:01:47
689000 -- [-1872.255] (-1866.058) (-1871.044) (-1879.081) * (-1870.972) [-1869.016] (-1874.667) (-1869.225) -- 0:01:46
690000 -- [-1870.235] (-1872.411) (-1869.733) (-1871.922) * (-1879.974) [-1866.384] (-1866.600) (-1874.280) -- 0:01:46
Average standard deviation of split frequencies: 0.006081
691000 -- (-1872.109) [-1874.932] (-1877.472) (-1867.614) * (-1865.344) [-1870.805] (-1871.394) (-1872.611) -- 0:01:46
692000 -- [-1875.023] (-1867.960) (-1879.422) (-1878.668) * [-1871.343] (-1876.724) (-1869.882) (-1874.695) -- 0:01:45
693000 -- (-1874.855) (-1875.146) [-1868.459] (-1877.938) * (-1870.168) (-1876.424) (-1877.553) [-1866.267] -- 0:01:45
694000 -- (-1878.012) [-1874.424] (-1866.335) (-1881.002) * (-1871.520) (-1878.311) (-1868.810) [-1867.792] -- 0:01:45
695000 -- (-1871.016) (-1878.050) (-1881.821) [-1863.484] * (-1877.067) (-1872.767) [-1867.003] (-1870.899) -- 0:01:44
Average standard deviation of split frequencies: 0.006219
696000 -- (-1876.498) (-1882.939) [-1870.201] (-1867.902) * [-1864.923] (-1867.535) (-1879.774) (-1876.068) -- 0:01:44
697000 -- (-1865.532) (-1880.234) [-1876.500] (-1870.018) * (-1883.072) (-1869.433) (-1874.143) [-1871.301] -- 0:01:44
698000 -- (-1880.489) (-1875.763) (-1868.774) [-1875.122] * [-1868.488] (-1882.439) (-1874.899) (-1877.481) -- 0:01:44
699000 -- (-1871.156) (-1877.279) (-1874.725) [-1870.503] * (-1876.205) (-1875.149) (-1868.285) [-1867.119] -- 0:01:43
700000 -- (-1876.712) (-1872.170) (-1876.722) [-1868.035] * [-1867.187] (-1874.410) (-1869.593) (-1870.119) -- 0:01:43
Average standard deviation of split frequencies: 0.005015
701000 -- (-1883.906) (-1872.314) [-1866.368] (-1864.289) * [-1868.450] (-1867.801) (-1869.784) (-1873.185) -- 0:01:43
702000 -- (-1871.202) (-1882.483) [-1866.760] (-1866.834) * (-1868.872) (-1866.551) (-1879.546) [-1870.986] -- 0:01:42
703000 -- (-1871.627) (-1869.466) [-1874.956] (-1875.377) * [-1874.659] (-1875.117) (-1874.727) (-1871.211) -- 0:01:42
704000 -- (-1884.679) [-1874.739] (-1869.179) (-1871.657) * [-1870.390] (-1871.320) (-1874.383) (-1875.119) -- 0:01:42
705000 -- (-1875.992) (-1867.483) (-1872.231) [-1875.070] * (-1872.814) (-1875.779) [-1871.433] (-1877.507) -- 0:01:41
Average standard deviation of split frequencies: 0.005524
706000 -- (-1882.602) (-1878.747) [-1873.687] (-1881.363) * (-1878.501) [-1866.488] (-1867.177) (-1867.890) -- 0:01:41
707000 -- [-1869.080] (-1869.084) (-1870.128) (-1876.139) * [-1869.210] (-1874.414) (-1871.348) (-1870.940) -- 0:01:41
708000 -- (-1879.642) (-1871.792) [-1871.858] (-1880.746) * (-1875.433) (-1868.515) (-1878.719) [-1871.720] -- 0:01:40
709000 -- (-1875.126) [-1871.400] (-1873.281) (-1863.664) * (-1872.560) (-1865.776) [-1870.478] (-1884.015) -- 0:01:40
710000 -- (-1877.561) (-1867.669) [-1872.620] (-1870.830) * (-1872.269) (-1872.337) [-1872.654] (-1874.192) -- 0:01:40
Average standard deviation of split frequencies: 0.005970
711000 -- [-1872.207] (-1882.411) (-1867.926) (-1875.962) * (-1865.520) (-1874.566) (-1875.098) [-1873.569] -- 0:01:39
712000 -- (-1876.178) (-1881.707) [-1874.485] (-1873.682) * (-1872.739) [-1875.485] (-1876.648) (-1866.448) -- 0:01:39
713000 -- (-1876.011) [-1873.365] (-1871.508) (-1876.091) * (-1880.524) (-1874.800) [-1875.021] (-1872.810) -- 0:01:39
714000 -- (-1884.719) [-1875.495] (-1862.901) (-1872.842) * (-1871.932) (-1875.518) (-1878.745) [-1871.298] -- 0:01:38
715000 -- (-1878.877) [-1871.012] (-1873.483) (-1867.103) * (-1876.916) [-1870.758] (-1879.390) (-1870.756) -- 0:01:38
Average standard deviation of split frequencies: 0.006165
716000 -- (-1871.376) [-1869.673] (-1876.860) (-1877.455) * (-1880.373) [-1877.125] (-1878.962) (-1877.121) -- 0:01:37
717000 -- (-1876.552) (-1880.386) (-1872.655) [-1874.758] * (-1872.781) [-1870.670] (-1875.684) (-1866.403) -- 0:01:37
718000 -- (-1884.109) (-1874.105) (-1872.603) [-1867.519] * [-1874.110] (-1871.162) (-1874.251) (-1874.814) -- 0:01:37
719000 -- (-1872.413) (-1873.593) (-1874.713) [-1870.582] * (-1875.841) [-1876.460] (-1876.691) (-1870.009) -- 0:01:36
720000 -- [-1871.781] (-1869.447) (-1875.988) (-1871.321) * (-1887.731) (-1872.863) [-1871.740] (-1865.782) -- 0:01:36
Average standard deviation of split frequencies: 0.007017
721000 -- (-1869.288) (-1870.285) (-1868.114) [-1871.813] * (-1876.717) (-1873.540) (-1875.693) [-1875.508] -- 0:01:35
722000 -- (-1875.070) (-1875.384) [-1870.219] (-1879.884) * (-1873.948) (-1870.489) (-1874.533) [-1864.890] -- 0:01:35
723000 -- [-1868.123] (-1873.778) (-1867.414) (-1877.408) * (-1875.871) [-1871.361] (-1863.913) (-1865.592) -- 0:01:35
724000 -- (-1887.723) (-1870.345) [-1874.371] (-1868.702) * [-1874.847] (-1876.547) (-1873.289) (-1869.107) -- 0:01:35
725000 -- (-1887.127) (-1870.195) [-1871.456] (-1869.773) * (-1881.386) (-1877.923) [-1870.739] (-1872.704) -- 0:01:34
Average standard deviation of split frequencies: 0.008028
726000 -- (-1879.528) (-1867.696) [-1872.345] (-1875.242) * (-1875.677) [-1869.080] (-1861.391) (-1872.923) -- 0:01:34
727000 -- (-1880.695) (-1868.848) [-1874.543] (-1866.282) * (-1873.254) (-1867.416) [-1868.507] (-1885.295) -- 0:01:34
728000 -- (-1868.473) [-1864.391] (-1871.795) (-1879.402) * (-1882.625) (-1880.287) (-1872.935) [-1872.923] -- 0:01:33
729000 -- (-1878.783) (-1870.820) (-1868.574) [-1870.084] * (-1879.204) (-1888.503) [-1871.726] (-1873.921) -- 0:01:33
730000 -- (-1876.683) (-1879.346) (-1890.157) [-1870.211] * (-1871.730) (-1872.258) (-1873.623) [-1873.463] -- 0:01:33
Average standard deviation of split frequencies: 0.008153
731000 -- (-1888.444) (-1870.082) [-1871.493] (-1877.681) * [-1873.960] (-1872.017) (-1874.026) (-1878.470) -- 0:01:32
732000 -- (-1884.743) (-1873.138) [-1869.883] (-1872.545) * (-1875.376) [-1874.204] (-1877.274) (-1873.037) -- 0:01:32
733000 -- (-1870.116) (-1868.839) (-1879.427) [-1866.139] * (-1873.455) (-1868.364) (-1872.609) [-1872.826] -- 0:01:32
734000 -- (-1876.809) (-1873.361) (-1877.204) [-1870.216] * (-1882.797) (-1872.282) (-1867.707) [-1871.509] -- 0:01:31
735000 -- [-1868.082] (-1880.209) (-1869.863) (-1865.819) * (-1882.296) (-1876.261) (-1871.917) [-1868.686] -- 0:01:31
Average standard deviation of split frequencies: 0.007686
736000 -- (-1874.714) (-1872.664) (-1880.354) [-1867.395] * (-1872.777) [-1871.841] (-1873.150) (-1879.752) -- 0:01:31
737000 -- [-1871.515] (-1867.939) (-1873.906) (-1870.027) * (-1870.534) (-1884.738) [-1867.797] (-1880.176) -- 0:01:30
738000 -- [-1872.030] (-1870.451) (-1870.854) (-1872.036) * (-1869.830) (-1872.217) [-1877.412] (-1878.898) -- 0:01:30
739000 -- (-1867.606) [-1866.583] (-1871.636) (-1872.831) * (-1871.743) (-1868.456) (-1870.572) [-1873.490] -- 0:01:30
740000 -- (-1869.693) [-1866.462] (-1868.959) (-1875.640) * (-1878.602) (-1882.029) [-1872.326] (-1862.757) -- 0:01:29
Average standard deviation of split frequencies: 0.007869
741000 -- (-1865.862) [-1863.823] (-1870.112) (-1869.649) * (-1872.719) (-1872.076) (-1875.045) [-1872.096] -- 0:01:29
742000 -- (-1871.163) (-1871.477) [-1877.772] (-1872.563) * (-1871.165) (-1881.264) [-1868.558] (-1872.111) -- 0:01:29
743000 -- (-1874.029) (-1877.842) (-1870.493) [-1869.110] * (-1867.839) (-1875.443) (-1873.227) [-1869.700] -- 0:01:28
744000 -- (-1867.462) (-1891.319) [-1875.892] (-1875.409) * (-1871.758) (-1873.611) [-1872.466] (-1871.288) -- 0:01:28
745000 -- (-1868.717) (-1878.936) [-1874.843] (-1879.311) * [-1870.555] (-1870.517) (-1870.339) (-1868.415) -- 0:01:27
Average standard deviation of split frequencies: 0.008042
746000 -- (-1875.212) (-1873.427) (-1882.620) [-1869.502] * (-1887.922) [-1871.899] (-1868.105) (-1876.103) -- 0:01:27
747000 -- (-1868.204) [-1870.780] (-1879.156) (-1870.827) * (-1884.194) [-1874.401] (-1873.767) (-1874.552) -- 0:01:27
748000 -- (-1870.263) [-1874.876] (-1875.198) (-1871.217) * (-1887.295) (-1873.953) (-1869.083) [-1868.659] -- 0:01:26
749000 -- [-1872.606] (-1876.328) (-1873.284) (-1868.535) * [-1871.433] (-1882.264) (-1876.784) (-1875.120) -- 0:01:26
750000 -- (-1873.532) (-1875.277) (-1871.314) [-1878.229] * (-1876.165) (-1866.475) (-1875.799) [-1863.573] -- 0:01:26
Average standard deviation of split frequencies: 0.007593
751000 -- (-1872.149) (-1871.966) [-1865.793] (-1877.154) * [-1874.731] (-1877.397) (-1869.113) (-1890.310) -- 0:01:25
752000 -- [-1868.822] (-1873.733) (-1875.164) (-1878.197) * (-1871.375) (-1875.424) (-1878.808) [-1875.130] -- 0:01:25
753000 -- (-1866.954) [-1872.954] (-1880.048) (-1875.126) * [-1875.648] (-1876.905) (-1889.185) (-1881.121) -- 0:01:24
754000 -- (-1882.889) [-1872.936] (-1873.951) (-1870.537) * (-1884.316) (-1869.324) [-1865.100] (-1869.636) -- 0:01:24
755000 -- (-1881.004) (-1873.462) [-1868.897] (-1877.180) * (-1879.910) (-1866.918) [-1869.020] (-1876.903) -- 0:01:24
Average standard deviation of split frequencies: 0.008163
756000 -- (-1867.031) (-1872.635) (-1875.064) [-1880.111] * (-1874.271) (-1868.028) [-1862.748] (-1883.962) -- 0:01:23
757000 -- [-1867.025] (-1871.390) (-1873.589) (-1875.503) * [-1864.774] (-1874.441) (-1879.784) (-1883.102) -- 0:01:23
758000 -- (-1866.803) (-1874.340) (-1871.283) [-1873.421] * (-1879.025) (-1883.341) [-1874.402] (-1877.288) -- 0:01:23
759000 -- (-1870.177) (-1875.677) [-1867.839] (-1874.629) * (-1868.877) (-1877.529) (-1874.071) [-1873.963] -- 0:01:22
760000 -- (-1863.110) (-1876.909) [-1865.492] (-1879.240) * [-1872.263] (-1868.995) (-1867.618) (-1876.257) -- 0:01:22
Average standard deviation of split frequencies: 0.007775
761000 -- (-1865.274) (-1870.345) (-1877.944) [-1875.392] * (-1874.832) (-1873.323) [-1864.894] (-1872.852) -- 0:01:22
762000 -- (-1872.666) (-1869.415) (-1878.081) [-1876.698] * [-1869.413] (-1870.852) (-1873.616) (-1877.330) -- 0:01:22
763000 -- [-1864.916] (-1871.304) (-1875.094) (-1875.259) * (-1886.426) (-1884.957) [-1872.357] (-1863.951) -- 0:01:21
764000 -- (-1874.304) [-1871.767] (-1876.633) (-1873.740) * (-1882.268) (-1875.126) [-1875.270] (-1869.543) -- 0:01:21
765000 -- (-1869.042) (-1882.090) (-1867.443) [-1872.095] * (-1874.318) [-1875.070] (-1872.830) (-1870.307) -- 0:01:21
Average standard deviation of split frequencies: 0.008336
766000 -- (-1881.176) [-1872.409] (-1869.391) (-1871.222) * (-1875.132) [-1867.800] (-1868.144) (-1870.520) -- 0:01:20
767000 -- [-1875.775] (-1881.969) (-1867.930) (-1877.951) * (-1873.471) [-1871.743] (-1870.848) (-1869.970) -- 0:01:20
768000 -- (-1873.746) (-1866.579) [-1869.629] (-1876.275) * [-1875.992] (-1877.696) (-1876.864) (-1876.681) -- 0:01:20
769000 -- (-1885.018) (-1870.262) [-1869.487] (-1870.953) * (-1877.507) (-1870.864) (-1871.916) [-1874.988] -- 0:01:19
770000 -- (-1874.046) (-1868.369) [-1868.325] (-1875.018) * (-1883.028) (-1874.116) [-1870.444] (-1872.369) -- 0:01:19
Average standard deviation of split frequencies: 0.008397
771000 -- (-1881.489) (-1878.436) (-1868.039) [-1871.029] * (-1878.104) (-1880.191) (-1867.391) [-1867.277] -- 0:01:19
772000 -- (-1871.610) (-1873.524) [-1870.976] (-1876.219) * (-1881.032) (-1880.479) [-1870.854] (-1871.876) -- 0:01:18
773000 -- (-1877.807) (-1873.232) [-1873.939] (-1873.168) * (-1874.369) [-1874.520] (-1872.096) (-1865.999) -- 0:01:18
774000 -- (-1870.373) (-1876.377) [-1870.787] (-1873.497) * (-1870.505) (-1886.816) [-1869.578] (-1879.876) -- 0:01:17
775000 -- [-1874.150] (-1877.187) (-1866.721) (-1876.967) * (-1871.107) [-1866.980] (-1868.518) (-1877.003) -- 0:01:17
Average standard deviation of split frequencies: 0.008063
776000 -- [-1878.249] (-1872.708) (-1870.302) (-1878.951) * (-1881.810) (-1881.905) (-1864.835) [-1874.296] -- 0:01:17
777000 -- (-1867.582) (-1888.503) (-1872.356) [-1867.886] * (-1876.338) [-1870.729] (-1872.659) (-1875.686) -- 0:01:16
778000 -- [-1868.601] (-1878.696) (-1875.742) (-1881.083) * (-1876.027) (-1876.047) [-1867.341] (-1881.133) -- 0:01:16
779000 -- (-1869.928) (-1887.448) [-1870.364] (-1866.873) * (-1861.115) (-1874.166) (-1876.785) [-1868.899] -- 0:01:16
780000 -- (-1879.560) [-1879.498] (-1867.610) (-1871.182) * (-1872.408) (-1874.298) [-1864.657] (-1872.970) -- 0:01:15
Average standard deviation of split frequencies: 0.008070
781000 -- [-1878.021] (-1866.719) (-1869.734) (-1878.384) * [-1867.553] (-1874.361) (-1875.199) (-1872.731) -- 0:01:15
782000 -- (-1869.783) (-1872.612) (-1867.052) [-1868.225] * (-1874.491) [-1874.325] (-1879.940) (-1880.436) -- 0:01:14
783000 -- (-1873.508) [-1871.706] (-1865.635) (-1867.797) * (-1868.442) (-1871.810) [-1875.345] (-1874.739) -- 0:01:14
784000 -- (-1870.374) [-1874.003] (-1875.919) (-1868.199) * [-1870.213] (-1868.537) (-1882.816) (-1881.951) -- 0:01:14
785000 -- [-1867.305] (-1875.714) (-1871.729) (-1869.062) * (-1875.899) (-1866.644) [-1872.313] (-1882.322) -- 0:01:14
Average standard deviation of split frequencies: 0.008233
786000 -- (-1870.518) (-1868.670) (-1872.624) [-1866.453] * (-1872.754) [-1874.492] (-1874.950) (-1874.738) -- 0:01:13
787000 -- (-1871.475) [-1862.368] (-1874.314) (-1869.227) * (-1872.455) (-1871.836) (-1873.349) [-1872.517] -- 0:01:13
788000 -- (-1872.106) (-1867.553) [-1875.684] (-1873.063) * (-1872.643) (-1867.520) (-1874.015) [-1863.779] -- 0:01:13
789000 -- (-1868.480) (-1874.513) (-1869.736) [-1868.698] * (-1868.086) (-1875.902) (-1878.787) [-1875.887] -- 0:01:12
790000 -- [-1879.991] (-1882.392) (-1878.581) (-1864.118) * [-1870.913] (-1872.480) (-1870.857) (-1870.964) -- 0:01:12
Average standard deviation of split frequencies: 0.008889
791000 -- (-1872.121) (-1879.427) (-1874.390) [-1881.156] * (-1867.537) (-1860.086) [-1872.179] (-1865.485) -- 0:01:12
792000 -- (-1874.702) (-1871.266) (-1871.337) [-1870.906] * (-1876.728) (-1878.006) [-1870.305] (-1871.803) -- 0:01:11
793000 -- [-1872.119] (-1878.510) (-1876.485) (-1873.741) * (-1869.642) (-1877.834) (-1872.389) [-1870.687] -- 0:01:11
794000 -- [-1870.021] (-1877.878) (-1871.697) (-1874.946) * [-1869.335] (-1867.895) (-1873.799) (-1883.508) -- 0:01:11
795000 -- [-1874.574] (-1879.540) (-1873.351) (-1873.557) * [-1870.148] (-1879.935) (-1868.497) (-1869.894) -- 0:01:10
Average standard deviation of split frequencies: 0.008506
796000 -- [-1879.798] (-1873.991) (-1879.359) (-1873.744) * (-1880.368) (-1872.810) [-1868.557] (-1880.268) -- 0:01:10
797000 -- (-1875.115) [-1874.572] (-1870.153) (-1875.312) * (-1872.559) [-1870.797] (-1871.048) (-1872.230) -- 0:01:10
798000 -- (-1872.459) (-1870.837) (-1874.496) [-1866.674] * (-1880.980) (-1878.182) [-1867.460] (-1870.930) -- 0:01:09
799000 -- (-1874.637) [-1880.570] (-1873.332) (-1873.556) * [-1868.319] (-1872.389) (-1873.850) (-1878.696) -- 0:01:09
800000 -- [-1874.298] (-1872.347) (-1869.781) (-1875.354) * [-1878.091] (-1872.702) (-1871.961) (-1870.836) -- 0:01:09
Average standard deviation of split frequencies: 0.008831
801000 -- [-1874.773] (-1873.203) (-1863.776) (-1875.171) * (-1870.928) (-1875.986) [-1872.834] (-1875.462) -- 0:01:08
802000 -- (-1878.679) (-1882.060) [-1872.213] (-1876.084) * (-1864.171) (-1871.400) (-1877.585) [-1871.157] -- 0:01:08
803000 -- (-1875.524) (-1891.431) (-1872.200) [-1866.397] * [-1865.928] (-1866.419) (-1870.454) (-1870.717) -- 0:01:07
804000 -- (-1869.996) [-1872.018] (-1868.242) (-1868.545) * (-1872.214) [-1869.315] (-1878.289) (-1882.302) -- 0:01:07
805000 -- (-1873.903) (-1875.833) (-1875.765) [-1874.312] * (-1875.876) (-1878.850) [-1870.989] (-1868.379) -- 0:01:07
Average standard deviation of split frequencies: 0.008879
806000 -- (-1887.680) (-1879.375) (-1875.215) [-1874.104] * (-1877.276) (-1876.670) (-1877.411) [-1867.380] -- 0:01:06
807000 -- (-1888.868) [-1870.454] (-1873.470) (-1869.420) * (-1866.873) (-1872.198) (-1875.076) [-1867.473] -- 0:01:06
808000 -- (-1886.671) (-1871.511) (-1873.629) [-1868.359] * [-1865.877] (-1870.720) (-1881.170) (-1870.887) -- 0:01:06
809000 -- (-1879.891) (-1875.753) [-1870.092] (-1878.746) * [-1867.469] (-1881.506) (-1868.161) (-1878.092) -- 0:01:05
810000 -- (-1875.414) (-1872.099) [-1874.998] (-1869.955) * (-1875.258) (-1866.313) (-1870.470) [-1881.781] -- 0:01:05
Average standard deviation of split frequencies: 0.009198
811000 -- [-1867.768] (-1877.141) (-1876.700) (-1869.606) * (-1874.372) (-1873.430) [-1875.772] (-1874.014) -- 0:01:05
812000 -- (-1876.982) [-1867.962] (-1867.776) (-1868.066) * [-1867.204] (-1883.734) (-1867.539) (-1874.419) -- 0:01:04
813000 -- (-1869.486) (-1867.154) (-1867.689) [-1867.663] * (-1870.208) (-1877.423) [-1875.655] (-1874.502) -- 0:01:04
814000 -- [-1867.505] (-1870.959) (-1872.099) (-1879.668) * (-1878.878) [-1869.318] (-1871.286) (-1874.669) -- 0:01:03
815000 -- (-1871.795) [-1866.185] (-1870.505) (-1872.871) * (-1872.412) [-1870.397] (-1878.406) (-1875.530) -- 0:01:03
Average standard deviation of split frequencies: 0.008718
816000 -- (-1868.064) [-1878.314] (-1874.474) (-1878.309) * (-1866.391) (-1869.904) [-1866.140] (-1877.030) -- 0:01:03
817000 -- (-1873.057) (-1872.408) (-1877.995) [-1866.679] * (-1871.941) (-1870.479) [-1869.206] (-1872.925) -- 0:01:03
818000 -- [-1865.525] (-1874.145) (-1870.764) (-1875.111) * (-1871.841) [-1877.344] (-1872.110) (-1874.431) -- 0:01:02
819000 -- [-1863.749] (-1866.893) (-1867.082) (-1873.067) * (-1886.058) (-1877.224) [-1862.805] (-1876.575) -- 0:01:02
820000 -- [-1869.880] (-1870.189) (-1870.503) (-1874.035) * (-1868.479) (-1873.852) (-1869.826) [-1875.299] -- 0:01:02
Average standard deviation of split frequencies: 0.009191
821000 -- [-1870.595] (-1875.681) (-1868.830) (-1879.647) * (-1874.680) (-1879.081) (-1870.957) [-1874.426] -- 0:01:01
822000 -- (-1880.074) [-1867.648] (-1871.886) (-1872.435) * (-1872.759) (-1874.599) [-1871.339] (-1876.862) -- 0:01:01
823000 -- (-1869.169) [-1870.481] (-1877.491) (-1885.609) * (-1876.048) [-1869.069] (-1871.801) (-1870.906) -- 0:01:01
824000 -- (-1875.007) (-1878.463) [-1876.588] (-1873.186) * [-1868.972] (-1873.437) (-1872.263) (-1874.215) -- 0:01:00
825000 -- (-1869.172) (-1879.300) [-1868.104] (-1879.480) * (-1869.801) [-1876.965] (-1868.547) (-1873.075) -- 0:01:00
Average standard deviation of split frequencies: 0.009495
826000 -- (-1871.355) (-1879.083) [-1874.443] (-1870.522) * (-1879.772) (-1878.055) (-1885.810) [-1873.822] -- 0:01:00
827000 -- (-1883.634) [-1868.315] (-1876.182) (-1869.993) * (-1885.737) (-1867.189) (-1865.596) [-1872.137] -- 0:00:59
828000 -- (-1885.275) [-1871.707] (-1877.295) (-1881.378) * [-1868.437] (-1880.301) (-1868.381) (-1871.674) -- 0:00:59
829000 -- (-1874.971) (-1880.462) (-1869.431) [-1869.910] * (-1870.660) (-1874.217) (-1870.925) [-1867.154] -- 0:00:58
830000 -- (-1869.155) (-1875.518) [-1868.747] (-1867.201) * (-1880.653) [-1871.163] (-1870.934) (-1868.827) -- 0:00:58
Average standard deviation of split frequencies: 0.010009
831000 -- (-1878.064) (-1877.531) [-1869.663] (-1868.800) * (-1877.386) (-1874.590) [-1874.127] (-1875.917) -- 0:00:58
832000 -- (-1879.262) (-1877.713) (-1883.287) [-1874.269] * (-1873.631) (-1875.896) (-1885.496) [-1868.260] -- 0:00:57
833000 -- (-1876.673) (-1878.440) (-1880.873) [-1877.494] * (-1882.452) (-1882.702) [-1867.996] (-1870.699) -- 0:00:57
834000 -- (-1877.422) (-1878.224) (-1872.093) [-1883.457] * (-1873.189) (-1886.768) [-1864.397] (-1868.983) -- 0:00:57
835000 -- [-1867.562] (-1874.125) (-1887.830) (-1876.047) * (-1868.106) [-1865.786] (-1878.712) (-1869.143) -- 0:00:56
Average standard deviation of split frequencies: 0.009535
836000 -- (-1874.642) (-1878.176) (-1885.849) [-1876.795] * (-1880.616) [-1863.344] (-1872.001) (-1880.708) -- 0:00:56
837000 -- (-1873.924) [-1871.704] (-1875.364) (-1873.387) * [-1870.684] (-1867.956) (-1870.872) (-1869.374) -- 0:00:56
838000 -- (-1880.207) [-1868.450] (-1868.653) (-1873.524) * [-1875.353] (-1882.216) (-1875.070) (-1875.116) -- 0:00:55
839000 -- (-1869.756) (-1871.238) [-1869.927] (-1870.395) * (-1874.607) (-1879.361) [-1871.624] (-1876.748) -- 0:00:55
840000 -- (-1864.630) (-1872.403) [-1872.425] (-1868.562) * (-1863.979) (-1870.290) (-1871.568) [-1873.528] -- 0:00:55
Average standard deviation of split frequencies: 0.009125
841000 -- (-1877.533) (-1871.302) [-1876.360] (-1870.295) * [-1871.914] (-1886.332) (-1876.090) (-1883.389) -- 0:00:54
842000 -- (-1869.941) [-1865.753] (-1876.834) (-1872.840) * (-1871.608) (-1877.033) [-1873.935] (-1878.032) -- 0:00:54
843000 -- (-1869.283) (-1873.985) (-1869.519) [-1871.155] * (-1871.418) (-1876.866) (-1875.241) [-1877.878] -- 0:00:54
844000 -- (-1872.932) (-1880.127) (-1872.280) [-1867.820] * (-1881.027) (-1877.030) [-1874.347] (-1872.497) -- 0:00:53
845000 -- (-1875.684) (-1875.044) [-1871.914] (-1889.568) * (-1872.150) [-1867.836] (-1867.171) (-1877.335) -- 0:00:53
Average standard deviation of split frequencies: 0.008358
846000 -- [-1868.728] (-1870.474) (-1875.151) (-1877.371) * (-1877.833) [-1872.175] (-1870.152) (-1869.940) -- 0:00:53
847000 -- [-1871.924] (-1869.567) (-1873.804) (-1877.784) * [-1868.222] (-1863.813) (-1869.904) (-1874.611) -- 0:00:52
848000 -- (-1877.219) (-1864.917) [-1868.805] (-1868.059) * (-1881.377) (-1871.084) [-1871.438] (-1872.793) -- 0:00:52
849000 -- (-1882.600) (-1875.851) [-1866.716] (-1870.968) * (-1869.815) (-1880.507) (-1888.920) [-1873.127] -- 0:00:52
850000 -- (-1878.452) (-1867.490) [-1866.553] (-1869.206) * (-1875.199) (-1874.312) (-1879.344) [-1867.916] -- 0:00:51
Average standard deviation of split frequencies: 0.008564
851000 -- (-1871.612) [-1867.505] (-1864.826) (-1881.034) * (-1875.508) (-1879.237) [-1877.499] (-1872.478) -- 0:00:51
852000 -- (-1865.357) (-1876.409) [-1871.879] (-1869.718) * (-1876.136) (-1882.103) [-1878.551] (-1875.024) -- 0:00:51
853000 -- (-1874.527) (-1871.646) (-1867.691) [-1869.440] * (-1874.284) [-1873.439] (-1870.995) (-1880.181) -- 0:00:50
854000 -- (-1864.856) (-1873.822) (-1876.311) [-1866.823] * (-1879.307) (-1879.230) (-1876.923) [-1869.471] -- 0:00:50
855000 -- [-1872.441] (-1870.237) (-1886.414) (-1872.441) * (-1871.240) (-1871.600) (-1878.949) [-1875.227] -- 0:00:50
Average standard deviation of split frequencies: 0.008861
856000 -- [-1874.521] (-1886.535) (-1870.339) (-1872.196) * (-1875.717) [-1869.228] (-1885.782) (-1876.452) -- 0:00:49
857000 -- (-1870.457) (-1870.407) [-1870.854] (-1871.520) * [-1880.059] (-1866.460) (-1872.260) (-1874.277) -- 0:00:49
858000 -- (-1871.077) (-1879.793) (-1865.728) [-1873.102] * (-1875.214) (-1865.461) [-1869.854] (-1872.718) -- 0:00:48
859000 -- (-1870.261) (-1874.187) (-1873.495) [-1871.052] * [-1872.668] (-1867.901) (-1879.252) (-1873.630) -- 0:00:48
860000 -- (-1867.320) (-1870.081) [-1882.272] (-1866.574) * (-1869.392) (-1869.202) [-1873.549] (-1877.323) -- 0:00:48
Average standard deviation of split frequencies: 0.009212
861000 -- [-1866.357] (-1877.872) (-1884.537) (-1868.691) * [-1872.682] (-1874.386) (-1874.996) (-1877.924) -- 0:00:47
862000 -- (-1869.738) (-1875.195) [-1869.293] (-1876.731) * (-1869.578) [-1875.926] (-1881.931) (-1873.759) -- 0:00:47
863000 -- (-1878.064) (-1871.590) (-1868.313) [-1875.007] * (-1872.031) (-1867.838) [-1866.469] (-1870.416) -- 0:00:47
864000 -- (-1868.368) [-1867.042] (-1870.321) (-1879.796) * (-1867.492) [-1867.587] (-1872.980) (-1879.174) -- 0:00:46
865000 -- [-1862.607] (-1868.807) (-1871.555) (-1867.635) * (-1872.771) (-1872.785) (-1869.298) [-1867.357] -- 0:00:46
Average standard deviation of split frequencies: 0.009056
866000 -- (-1870.693) (-1887.739) (-1869.434) [-1870.712] * (-1867.898) [-1869.850] (-1873.948) (-1868.989) -- 0:00:46
867000 -- [-1870.328] (-1869.798) (-1872.710) (-1869.811) * (-1873.691) [-1868.041] (-1877.656) (-1871.089) -- 0:00:45
868000 -- (-1872.339) (-1868.170) [-1867.291] (-1878.340) * (-1876.754) [-1869.490] (-1876.692) (-1877.642) -- 0:00:45
869000 -- (-1874.648) [-1874.085] (-1876.986) (-1877.856) * (-1877.218) (-1873.287) (-1871.378) [-1875.243] -- 0:00:45
870000 -- (-1882.286) [-1866.831] (-1875.478) (-1879.294) * (-1870.044) [-1877.111] (-1876.320) (-1864.025) -- 0:00:44
Average standard deviation of split frequencies: 0.009155
871000 -- (-1876.755) (-1881.144) (-1874.080) [-1864.463] * (-1874.503) (-1871.077) (-1871.664) [-1869.589] -- 0:00:44
872000 -- (-1876.645) (-1874.223) [-1874.427] (-1876.001) * (-1872.656) (-1868.186) (-1869.821) [-1870.403] -- 0:00:44
873000 -- (-1880.652) (-1871.182) (-1877.533) [-1868.561] * (-1865.218) [-1867.172] (-1872.888) (-1876.337) -- 0:00:43
874000 -- (-1878.251) [-1875.807] (-1879.865) (-1879.658) * (-1866.949) [-1873.612] (-1864.877) (-1863.616) -- 0:00:43
875000 -- (-1867.931) (-1869.811) [-1868.656] (-1865.078) * (-1870.762) (-1871.917) (-1866.740) [-1870.431] -- 0:00:43
Average standard deviation of split frequencies: 0.008659
876000 -- (-1872.128) [-1869.846] (-1869.905) (-1877.944) * (-1870.673) (-1881.016) [-1864.392] (-1885.256) -- 0:00:42
877000 -- (-1877.216) (-1874.025) [-1869.130] (-1872.221) * (-1873.526) (-1869.711) [-1865.006] (-1871.550) -- 0:00:42
878000 -- (-1876.002) [-1869.687] (-1870.344) (-1869.757) * (-1866.367) [-1869.326] (-1889.836) (-1874.914) -- 0:00:42
879000 -- [-1878.155] (-1869.235) (-1872.235) (-1871.522) * (-1869.589) (-1870.070) [-1873.962] (-1870.806) -- 0:00:41
880000 -- (-1871.381) (-1874.087) [-1870.166] (-1870.374) * [-1868.238] (-1865.935) (-1877.481) (-1871.739) -- 0:00:41
Average standard deviation of split frequencies: 0.009002
881000 -- [-1870.646] (-1870.235) (-1873.956) (-1878.813) * (-1871.404) [-1862.492] (-1871.711) (-1873.388) -- 0:00:41
882000 -- [-1876.242] (-1876.617) (-1873.430) (-1868.137) * (-1864.998) (-1867.860) (-1869.554) [-1867.911] -- 0:00:40
883000 -- (-1867.875) (-1882.585) (-1870.590) [-1869.057] * (-1871.278) [-1866.988] (-1875.526) (-1877.538) -- 0:00:40
884000 -- (-1865.945) (-1878.261) [-1863.503] (-1873.680) * (-1875.379) [-1873.453] (-1878.733) (-1880.101) -- 0:00:40
885000 -- [-1868.841] (-1876.489) (-1878.460) (-1866.961) * [-1865.224] (-1869.919) (-1875.600) (-1868.327) -- 0:00:39
Average standard deviation of split frequencies: 0.009480
886000 -- (-1875.015) (-1870.008) (-1875.125) [-1872.519] * [-1866.447] (-1873.377) (-1876.536) (-1867.803) -- 0:00:39
887000 -- [-1875.910] (-1880.382) (-1873.171) (-1875.616) * (-1866.128) [-1874.836] (-1878.189) (-1873.973) -- 0:00:38
888000 -- [-1866.592] (-1878.642) (-1872.800) (-1873.958) * [-1866.211] (-1877.388) (-1870.414) (-1871.304) -- 0:00:38
889000 -- [-1875.726] (-1874.308) (-1872.589) (-1875.982) * (-1872.627) (-1881.589) [-1874.551] (-1882.796) -- 0:00:38
890000 -- (-1872.974) [-1867.390] (-1879.257) (-1873.565) * (-1872.603) (-1867.156) [-1873.384] (-1873.347) -- 0:00:37
Average standard deviation of split frequencies: 0.009816
891000 -- (-1867.467) [-1862.944] (-1873.134) (-1867.716) * (-1868.018) (-1877.690) [-1872.393] (-1876.663) -- 0:00:37
892000 -- [-1870.384] (-1872.109) (-1869.327) (-1870.724) * (-1873.912) [-1866.251] (-1885.900) (-1876.617) -- 0:00:37
893000 -- (-1871.209) (-1877.941) [-1871.477] (-1867.501) * (-1871.678) (-1866.865) (-1879.097) [-1870.678] -- 0:00:36
894000 -- (-1872.957) (-1867.356) [-1869.098] (-1865.613) * [-1872.623] (-1879.060) (-1874.109) (-1874.182) -- 0:00:36
895000 -- (-1872.719) (-1879.729) (-1873.370) [-1870.916] * (-1879.618) (-1868.767) (-1892.778) [-1881.924] -- 0:00:36
Average standard deviation of split frequencies: 0.010331
896000 -- (-1877.360) [-1875.092] (-1870.365) (-1865.877) * (-1874.802) (-1871.752) [-1873.536] (-1872.877) -- 0:00:35
897000 -- [-1868.782] (-1873.863) (-1876.758) (-1875.255) * (-1879.707) (-1867.251) [-1867.125] (-1873.969) -- 0:00:35
898000 -- (-1865.069) (-1870.300) [-1870.258] (-1873.175) * (-1880.030) (-1862.177) [-1875.884] (-1866.504) -- 0:00:35
899000 -- (-1873.475) (-1872.847) [-1868.724] (-1881.689) * [-1872.932] (-1873.678) (-1875.293) (-1863.094) -- 0:00:34
900000 -- (-1872.812) [-1877.027] (-1870.199) (-1871.526) * (-1883.517) [-1866.937] (-1866.573) (-1874.728) -- 0:00:34
Average standard deviation of split frequencies: 0.010135
901000 -- (-1869.168) [-1872.464] (-1872.597) (-1871.484) * (-1872.072) [-1865.286] (-1871.945) (-1879.062) -- 0:00:34
902000 -- [-1869.778] (-1869.077) (-1869.364) (-1869.491) * (-1881.756) (-1876.158) [-1868.405] (-1869.779) -- 0:00:33
903000 -- (-1868.448) [-1871.785] (-1887.292) (-1875.554) * (-1878.810) (-1868.820) (-1877.339) [-1864.837] -- 0:00:33
904000 -- (-1876.951) (-1868.942) [-1870.714] (-1871.108) * (-1877.728) (-1876.425) (-1870.749) [-1871.850] -- 0:00:33
905000 -- (-1872.697) (-1875.975) [-1874.534] (-1874.285) * [-1870.873] (-1869.703) (-1879.333) (-1875.684) -- 0:00:32
Average standard deviation of split frequencies: 0.009981
906000 -- [-1871.539] (-1880.194) (-1871.777) (-1866.217) * (-1884.636) (-1871.750) (-1879.632) [-1874.915] -- 0:00:32
907000 -- (-1872.009) [-1863.731] (-1870.877) (-1878.056) * (-1874.046) [-1867.914] (-1884.620) (-1874.189) -- 0:00:32
908000 -- (-1874.277) (-1865.120) [-1869.623] (-1867.874) * (-1873.713) (-1880.082) (-1871.521) [-1870.236] -- 0:00:31
909000 -- (-1873.240) (-1875.822) (-1871.811) [-1876.907] * (-1875.042) (-1866.116) (-1878.978) [-1874.592] -- 0:00:31
910000 -- (-1873.671) (-1867.756) (-1876.155) [-1870.750] * [-1871.337] (-1869.583) (-1870.614) (-1875.165) -- 0:00:31
Average standard deviation of split frequencies: 0.009694
911000 -- (-1874.329) [-1882.397] (-1878.241) (-1879.232) * (-1873.832) (-1870.982) (-1868.253) [-1868.888] -- 0:00:30
912000 -- (-1878.086) [-1870.126] (-1878.338) (-1876.946) * (-1865.680) (-1873.849) (-1873.972) [-1870.556] -- 0:00:30
913000 -- (-1874.041) (-1867.575) (-1879.178) [-1875.189] * (-1873.410) (-1870.088) (-1874.757) [-1879.286] -- 0:00:30
914000 -- [-1872.308] (-1876.480) (-1874.353) (-1867.558) * (-1869.677) (-1871.231) [-1883.689] (-1871.962) -- 0:00:29
915000 -- (-1875.169) (-1871.463) (-1868.724) [-1878.751] * (-1870.237) [-1867.978] (-1883.484) (-1874.133) -- 0:00:29
Average standard deviation of split frequencies: 0.009404
916000 -- (-1872.508) (-1870.179) (-1877.604) [-1867.499] * (-1872.058) (-1876.321) [-1874.655] (-1875.812) -- 0:00:28
917000 -- (-1872.572) (-1877.756) (-1870.561) [-1877.698] * (-1873.577) (-1880.563) [-1867.105] (-1875.807) -- 0:00:28
918000 -- (-1867.459) (-1872.224) (-1867.358) [-1865.375] * (-1875.277) (-1874.552) (-1874.551) [-1876.130] -- 0:00:28
919000 -- [-1868.690] (-1876.135) (-1873.709) (-1873.065) * [-1869.582] (-1874.420) (-1873.185) (-1872.029) -- 0:00:27
920000 -- (-1869.672) (-1875.477) [-1865.032] (-1874.919) * (-1870.042) (-1879.077) [-1874.164] (-1874.591) -- 0:00:27
Average standard deviation of split frequencies: 0.009310
921000 -- (-1869.167) [-1874.129] (-1882.926) (-1871.241) * (-1875.787) [-1876.028] (-1879.730) (-1877.740) -- 0:00:27
922000 -- [-1872.957] (-1867.102) (-1878.424) (-1881.201) * [-1867.540] (-1870.576) (-1873.813) (-1875.652) -- 0:00:26
923000 -- (-1867.732) (-1868.466) [-1875.867] (-1881.262) * [-1869.021] (-1873.362) (-1870.834) (-1866.665) -- 0:00:26
924000 -- (-1881.904) (-1871.181) (-1871.644) [-1874.872] * (-1876.850) [-1873.036] (-1869.235) (-1872.007) -- 0:00:26
925000 -- (-1877.030) (-1871.244) [-1862.363] (-1869.508) * (-1868.617) [-1869.683] (-1875.872) (-1869.936) -- 0:00:25
Average standard deviation of split frequencies: 0.009071
926000 -- (-1882.625) (-1870.212) (-1873.546) [-1869.942] * (-1867.345) (-1868.435) (-1871.798) [-1867.753] -- 0:00:25
927000 -- (-1873.766) (-1869.096) [-1869.966] (-1868.292) * (-1878.841) (-1873.231) [-1870.806] (-1880.123) -- 0:00:25
928000 -- (-1885.766) (-1870.450) [-1868.034] (-1874.830) * (-1874.434) (-1880.293) (-1866.861) [-1871.936] -- 0:00:24
929000 -- (-1873.379) [-1866.931] (-1871.218) (-1870.859) * (-1868.590) (-1877.719) (-1874.422) [-1872.392] -- 0:00:24
930000 -- (-1874.779) (-1875.645) [-1868.374] (-1872.180) * (-1868.343) [-1875.393] (-1869.789) (-1876.919) -- 0:00:24
Average standard deviation of split frequencies: 0.007782
931000 -- (-1873.260) [-1874.579] (-1866.624) (-1878.517) * (-1874.338) (-1871.954) [-1870.821] (-1876.972) -- 0:00:23
932000 -- (-1883.638) [-1870.948] (-1882.319) (-1869.963) * (-1873.758) (-1879.005) (-1877.152) [-1870.943] -- 0:00:23
933000 -- (-1870.816) [-1872.636] (-1872.873) (-1880.495) * (-1872.057) [-1874.663] (-1875.546) (-1875.620) -- 0:00:23
934000 -- (-1872.131) [-1870.739] (-1876.113) (-1873.877) * (-1876.903) (-1882.452) [-1872.243] (-1873.151) -- 0:00:22
935000 -- (-1868.625) (-1876.580) (-1866.768) [-1868.616] * (-1874.401) (-1876.334) (-1868.848) [-1868.915] -- 0:00:22
Average standard deviation of split frequencies: 0.007967
936000 -- (-1873.064) [-1866.580] (-1881.919) (-1870.225) * [-1862.941] (-1875.045) (-1873.808) (-1873.032) -- 0:00:22
937000 -- [-1869.714] (-1870.588) (-1876.450) (-1869.161) * [-1872.736] (-1869.012) (-1874.548) (-1878.313) -- 0:00:21
938000 -- (-1874.491) [-1871.670] (-1890.246) (-1875.068) * (-1881.326) (-1874.414) (-1867.638) [-1862.412] -- 0:00:21
939000 -- (-1877.858) (-1874.644) [-1874.781] (-1871.420) * (-1882.984) (-1877.488) (-1873.146) [-1882.234] -- 0:00:21
940000 -- (-1869.683) (-1870.659) [-1870.688] (-1880.179) * [-1863.997] (-1868.578) (-1869.038) (-1875.794) -- 0:00:20
Average standard deviation of split frequencies: 0.008109
941000 -- [-1876.017] (-1874.662) (-1878.884) (-1878.178) * (-1873.978) [-1869.691] (-1880.203) (-1868.137) -- 0:00:20
942000 -- (-1883.707) (-1876.387) (-1871.820) [-1870.534] * (-1871.911) (-1870.112) [-1867.331] (-1880.158) -- 0:00:20
943000 -- [-1871.878] (-1877.157) (-1871.750) (-1879.398) * (-1873.110) [-1871.308] (-1875.917) (-1869.273) -- 0:00:19
944000 -- (-1877.325) (-1875.244) (-1876.916) [-1868.212] * (-1873.225) [-1870.575] (-1873.990) (-1871.198) -- 0:00:19
945000 -- (-1873.355) [-1867.296] (-1873.859) (-1883.879) * (-1868.134) (-1872.685) (-1873.597) [-1874.128] -- 0:00:18
Average standard deviation of split frequencies: 0.008607
946000 -- (-1869.619) (-1872.826) (-1877.596) [-1876.219] * (-1869.297) (-1880.806) (-1870.715) [-1868.106] -- 0:00:18
947000 -- [-1866.640] (-1869.392) (-1876.123) (-1879.544) * (-1871.634) (-1867.728) [-1870.720] (-1877.014) -- 0:00:18
948000 -- [-1871.376] (-1869.263) (-1872.866) (-1872.629) * (-1869.271) [-1864.338] (-1882.990) (-1873.549) -- 0:00:17
949000 -- [-1871.146] (-1874.212) (-1868.962) (-1864.398) * [-1866.186] (-1872.968) (-1877.384) (-1873.947) -- 0:00:17
950000 -- [-1867.244] (-1877.733) (-1876.639) (-1879.724) * [-1872.003] (-1875.676) (-1873.587) (-1880.038) -- 0:00:17
Average standard deviation of split frequencies: 0.008249
951000 -- (-1875.682) (-1868.902) [-1870.030] (-1881.537) * (-1866.863) (-1874.245) [-1870.517] (-1879.205) -- 0:00:16
952000 -- (-1870.463) [-1869.017] (-1875.120) (-1884.021) * (-1868.677) (-1876.961) [-1869.078] (-1874.795) -- 0:00:16
953000 -- (-1871.181) (-1876.734) [-1867.932] (-1871.716) * (-1874.852) (-1874.573) [-1865.319] (-1868.980) -- 0:00:16
954000 -- (-1869.071) [-1880.503] (-1874.134) (-1878.158) * [-1875.219] (-1874.298) (-1875.299) (-1875.854) -- 0:00:15
955000 -- [-1865.527] (-1873.149) (-1867.547) (-1871.680) * (-1869.287) (-1871.240) [-1868.982] (-1870.146) -- 0:00:15
Average standard deviation of split frequencies: 0.008607
956000 -- (-1880.233) [-1873.029] (-1874.199) (-1872.913) * (-1875.350) [-1868.920] (-1873.099) (-1880.095) -- 0:00:15
957000 -- (-1874.650) [-1874.386] (-1868.083) (-1872.772) * [-1874.018] (-1874.384) (-1872.352) (-1868.622) -- 0:00:14
958000 -- (-1873.615) (-1878.494) (-1876.851) [-1867.557] * (-1872.576) (-1870.372) (-1876.380) [-1867.816] -- 0:00:14
959000 -- (-1874.602) (-1876.504) (-1877.205) [-1862.899] * (-1874.340) (-1873.070) (-1870.666) [-1869.604] -- 0:00:14
960000 -- (-1874.701) (-1867.920) [-1868.708] (-1865.501) * (-1873.958) (-1880.013) [-1873.338] (-1881.136) -- 0:00:13
Average standard deviation of split frequencies: 0.008520
961000 -- (-1884.248) [-1866.146] (-1877.481) (-1870.006) * (-1868.303) (-1867.779) [-1868.706] (-1878.185) -- 0:00:13
962000 -- (-1869.290) (-1871.156) (-1872.051) [-1866.936] * (-1869.376) (-1869.468) [-1868.014] (-1868.614) -- 0:00:13
963000 -- [-1878.981] (-1873.446) (-1872.396) (-1877.238) * (-1875.271) [-1865.165] (-1873.332) (-1883.344) -- 0:00:12
964000 -- [-1877.824] (-1875.222) (-1879.018) (-1874.482) * [-1876.833] (-1871.753) (-1866.801) (-1877.911) -- 0:00:12
965000 -- [-1871.023] (-1870.576) (-1866.621) (-1877.071) * (-1874.140) (-1874.446) (-1871.805) [-1866.538] -- 0:00:12
Average standard deviation of split frequencies: 0.008961
966000 -- (-1869.350) (-1880.215) (-1883.746) [-1869.471] * (-1868.466) [-1873.587] (-1868.357) (-1876.850) -- 0:00:11
967000 -- [-1865.437] (-1875.588) (-1874.173) (-1880.217) * (-1873.377) [-1868.955] (-1882.380) (-1866.341) -- 0:00:11
968000 -- (-1880.358) [-1877.388] (-1868.998) (-1872.297) * (-1871.328) [-1868.613] (-1879.664) (-1870.739) -- 0:00:11
969000 -- (-1871.881) (-1881.944) (-1874.370) [-1862.224] * [-1872.179] (-1871.685) (-1869.808) (-1872.118) -- 0:00:10
970000 -- (-1873.647) (-1877.702) [-1869.940] (-1877.078) * (-1883.828) [-1867.798] (-1871.217) (-1874.145) -- 0:00:10
Average standard deviation of split frequencies: 0.008830
971000 -- [-1869.424] (-1880.306) (-1880.588) (-1876.258) * [-1874.646] (-1876.057) (-1872.142) (-1867.284) -- 0:00:10
972000 -- [-1876.469] (-1873.315) (-1874.980) (-1873.506) * [-1870.956] (-1875.829) (-1873.380) (-1866.620) -- 0:00:09
973000 -- (-1875.070) (-1868.723) [-1862.156] (-1883.382) * (-1871.438) [-1874.896] (-1877.207) (-1868.367) -- 0:00:09
974000 -- (-1865.662) (-1872.231) [-1865.762] (-1881.648) * (-1879.714) [-1873.129] (-1874.977) (-1878.964) -- 0:00:08
975000 -- (-1882.170) (-1879.155) (-1865.824) [-1870.818] * (-1876.371) [-1866.345] (-1880.546) (-1882.589) -- 0:00:08
Average standard deviation of split frequencies: 0.009001
976000 -- (-1870.565) (-1874.370) [-1867.605] (-1865.828) * (-1875.619) (-1871.029) [-1869.112] (-1886.691) -- 0:00:08
977000 -- [-1874.905] (-1868.415) (-1872.853) (-1867.326) * (-1878.397) [-1870.222] (-1862.413) (-1873.326) -- 0:00:07
978000 -- (-1875.212) (-1875.173) (-1865.216) [-1872.759] * (-1867.951) [-1865.256] (-1872.346) (-1873.656) -- 0:00:07
979000 -- [-1865.155] (-1868.767) (-1878.778) (-1870.831) * (-1874.744) [-1867.878] (-1873.211) (-1882.018) -- 0:00:07
980000 -- [-1864.700] (-1868.728) (-1873.489) (-1864.244) * (-1871.070) (-1875.357) (-1873.636) [-1871.313] -- 0:00:06
Average standard deviation of split frequencies: 0.008696
981000 -- (-1873.900) [-1873.968] (-1876.887) (-1870.875) * (-1869.559) (-1879.780) (-1869.747) [-1870.214] -- 0:00:06
982000 -- (-1864.407) (-1870.902) [-1871.205] (-1880.609) * (-1877.022) (-1874.495) [-1875.966] (-1868.722) -- 0:00:06
983000 -- (-1875.871) (-1881.003) [-1871.531] (-1873.008) * (-1871.966) [-1873.146] (-1867.731) (-1871.746) -- 0:00:05
984000 -- [-1867.209] (-1869.649) (-1866.533) (-1875.102) * [-1871.532] (-1884.539) (-1867.716) (-1879.267) -- 0:00:05
985000 -- (-1865.342) (-1871.523) (-1866.658) [-1873.353] * [-1868.567] (-1878.818) (-1869.824) (-1867.491) -- 0:00:05
Average standard deviation of split frequencies: 0.008649
986000 -- (-1883.180) (-1869.175) [-1867.082] (-1873.466) * [-1872.542] (-1881.909) (-1874.371) (-1865.828) -- 0:00:04
987000 -- (-1869.584) (-1868.321) [-1871.865] (-1878.466) * (-1875.828) [-1875.325] (-1874.343) (-1866.514) -- 0:00:04
988000 -- (-1871.777) (-1874.987) (-1878.051) [-1873.961] * [-1867.114] (-1873.530) (-1874.119) (-1872.876) -- 0:00:04
989000 -- (-1874.263) [-1867.826] (-1869.131) (-1879.627) * (-1876.323) (-1873.234) (-1868.108) [-1869.463] -- 0:00:03
990000 -- (-1882.323) (-1873.290) [-1866.457] (-1871.475) * [-1880.372] (-1872.601) (-1873.030) (-1867.330) -- 0:00:03
Average standard deviation of split frequencies: 0.008435
991000 -- (-1880.582) [-1870.536] (-1867.370) (-1868.587) * (-1874.203) [-1869.340] (-1877.268) (-1871.837) -- 0:00:03
992000 -- [-1869.769] (-1869.247) (-1865.169) (-1865.197) * (-1864.281) [-1870.286] (-1878.673) (-1878.900) -- 0:00:02
993000 -- (-1871.323) [-1869.219] (-1877.045) (-1878.025) * (-1864.035) (-1872.105) (-1873.578) [-1866.109] -- 0:00:02
994000 -- (-1878.288) [-1875.956] (-1874.441) (-1872.441) * (-1873.295) (-1869.187) [-1870.111] (-1873.186) -- 0:00:02
995000 -- (-1879.592) (-1886.741) [-1864.669] (-1872.256) * [-1875.274] (-1875.879) (-1878.394) (-1872.009) -- 0:00:01
Average standard deviation of split frequencies: 0.008089
996000 -- (-1878.297) (-1875.607) (-1869.938) [-1867.121] * (-1877.950) (-1866.818) (-1866.226) [-1871.337] -- 0:00:01
997000 -- (-1875.220) [-1871.245] (-1873.389) (-1873.140) * (-1877.503) (-1871.315) (-1869.876) [-1865.475] -- 0:00:01
998000 -- [-1867.258] (-1867.391) (-1869.712) (-1880.113) * [-1864.245] (-1878.616) (-1878.669) (-1866.772) -- 0:00:00
999000 -- (-1868.837) (-1873.409) [-1864.143] (-1875.045) * [-1868.608] (-1873.332) (-1871.629) (-1874.118) -- 0:00:00
1000000 -- (-1871.820) (-1875.198) [-1867.822] (-1871.691) * [-1877.668] (-1869.322) (-1875.641) (-1877.008) -- 0:00:00
Average standard deviation of split frequencies: 0.008009
Analysis completed in 5 mins 45 seconds
Analysis used 344.93 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -1858.69
Likelihood of best state for "cold" chain of run 2 was -1857.93
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
54.7 % ( 42 %) Dirichlet(Revmat{all})
70.0 % ( 63 %) Slider(Revmat{all})
26.6 % ( 28 %) Dirichlet(Pi{all})
28.1 % ( 27 %) Slider(Pi{all})
44.4 % ( 22 %) Multiplier(Alpha{1,2})
55.7 % ( 28 %) Multiplier(Alpha{3})
55.7 % ( 37 %) Slider(Pinvar{all})
27.7 % ( 31 %) ExtSPR(Tau{all},V{all})
13.4 % ( 16 %) ExtTBR(Tau{all},V{all})
32.1 % ( 24 %) NNI(Tau{all},V{all})
38.5 % ( 37 %) ParsSPR(Tau{all},V{all})
26.7 % ( 31 %) Multiplier(V{all})
37.9 % ( 38 %) Nodeslider(V{all})
25.8 % ( 29 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
55.5 % ( 50 %) Dirichlet(Revmat{all})
70.9 % ( 64 %) Slider(Revmat{all})
26.2 % ( 20 %) Dirichlet(Pi{all})
28.6 % ( 24 %) Slider(Pi{all})
44.8 % ( 26 %) Multiplier(Alpha{1,2})
55.8 % ( 26 %) Multiplier(Alpha{3})
55.9 % ( 26 %) Slider(Pinvar{all})
27.9 % ( 25 %) ExtSPR(Tau{all},V{all})
13.4 % ( 18 %) ExtTBR(Tau{all},V{all})
32.3 % ( 25 %) NNI(Tau{all},V{all})
38.1 % ( 39 %) ParsSPR(Tau{all},V{all})
26.8 % ( 23 %) Multiplier(V{all})
37.6 % ( 44 %) Nodeslider(V{all})
25.6 % ( 39 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.77 0.58 0.42
2 | 166154 0.79 0.60
3 | 166877 167135 0.80
4 | 166641 167123 166070
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.77 0.58 0.42
2 | 166424 0.79 0.60
3 | 167206 166019 0.80
4 | 167443 166530 166378
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -1868.62
| 1 1|
| 1 2 2 |
| 21 1 2 21 1 2 |
| 2 2 2 * |
| 1 12 2 2 * 21 1 1 2 2 |
|* 2 1 2 2 1 * 22 * |
| 11 2 * 1 ** 1 2 1 2|
| 2 * 2 2 1121 2 1 2 11 * 1 1 |
| 122 11 2 1 112 1 2 *1 |
| 1 2 1 2 2 2 |
| 1 1 2 * 1 212 1 * 1 2 1 |
| 2 2 2 1 2 |
| |
| |
| 1 1 2 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -1873.64
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1865.80 -1879.55
2 -1865.96 -1879.94
--------------------------------------
TOTAL -1865.88 -1879.76
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.451659 0.005179 0.323877 0.597337 0.445167 1230.19 1275.51 1.000
r(A<->C){all} 0.069541 0.000812 0.020476 0.126434 0.066554 671.91 780.18 1.002
r(A<->G){all} 0.187722 0.001733 0.107723 0.268560 0.184180 760.38 801.50 1.000
r(A<->T){all} 0.117332 0.000831 0.067041 0.178537 0.115295 780.34 796.02 1.000
r(C<->G){all} 0.083463 0.000925 0.028729 0.142312 0.080474 811.69 819.43 1.000
r(C<->T){all} 0.510754 0.003250 0.390813 0.616064 0.510946 723.80 740.97 1.000
r(G<->T){all} 0.031189 0.000316 0.001092 0.065092 0.028921 914.98 929.28 1.000
pi(A){all} 0.267854 0.000231 0.237550 0.297582 0.267691 1091.38 1201.93 1.001
pi(C){all} 0.227746 0.000197 0.200981 0.256092 0.227221 1085.74 1293.37 1.001
pi(G){all} 0.194010 0.000183 0.168189 0.220006 0.193778 1310.99 1355.43 1.000
pi(T){all} 0.310390 0.000249 0.281256 0.343061 0.310388 1177.66 1211.45 1.000
alpha{1,2} 0.167802 0.005098 0.024165 0.303018 0.161687 977.08 1044.71 1.005
alpha{3} 2.116727 1.265798 0.479979 4.366005 1.874239 1005.88 1093.26 1.001
pinvar{all} 0.503875 0.007331 0.332414 0.659123 0.516264 873.67 876.92 1.002
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C2
3 -- C3
4 -- C4
5 -- C5
6 -- C6
7 -- C7
8 -- C8
9 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
---------------
1 -- .********
2 -- .*.......
3 -- ..*......
4 -- ...*.....
5 -- ....*....
6 -- .....*...
7 -- ......*..
8 -- .......*.
9 -- ........*
10 -- ...**....
11 -- .....***.
12 -- ...******
13 -- .....****
14 -- ..*******
15 -- ......**.
16 -- .....**..
17 -- .....*.*.
18 -- .**......
19 -- ...**...*
20 -- .*.******
---------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
10 3002 1.000000 0.000000 1.000000 1.000000 2
11 3002 1.000000 0.000000 1.000000 1.000000 2
12 2969 0.989007 0.001413 0.988008 0.990007 2
13 1894 0.630913 0.002827 0.628914 0.632911 2
14 1453 0.484011 0.016488 0.472352 0.495670 2
15 1038 0.345769 0.002827 0.343771 0.347768 2
16 1009 0.336109 0.014604 0.325783 0.346436 2
17 955 0.318121 0.017430 0.305796 0.330446 2
18 866 0.288474 0.002827 0.286476 0.290473 2
19 836 0.278481 0.010364 0.271153 0.285809 2
20 683 0.227515 0.019315 0.213857 0.241173 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.017696 0.000079 0.000064 0.033680 0.016879 1.000 2
length{all}[2] 0.252961 0.002978 0.153356 0.357912 0.246433 1.001 2
length{all}[3] 0.033726 0.000122 0.014447 0.056931 0.032952 1.001 2
length{all}[4] 0.001584 0.000003 0.000000 0.004729 0.001108 1.000 2
length{all}[5] 0.001515 0.000002 0.000000 0.004506 0.001037 1.000 2
length{all}[6] 0.001590 0.000002 0.000001 0.004946 0.001090 1.000 2
length{all}[7] 0.001612 0.000003 0.000001 0.004936 0.001109 1.000 2
length{all}[8] 0.001595 0.000002 0.000000 0.004831 0.001127 1.001 2
length{all}[9] 0.031575 0.000088 0.015165 0.050320 0.030560 1.000 2
length{all}[10] 0.041272 0.000130 0.021292 0.064031 0.040178 1.000 2
length{all}[11] 0.022218 0.000060 0.007295 0.036759 0.021193 1.000 2
length{all}[12] 0.024886 0.000090 0.007131 0.043502 0.023854 1.000 2
length{all}[13] 0.007970 0.000027 0.000002 0.017781 0.007114 1.000 2
length{all}[14] 0.011209 0.000055 0.000008 0.025045 0.010048 1.000 2
length{all}[15] 0.001545 0.000002 0.000001 0.004729 0.001017 1.000 2
length{all}[16] 0.001645 0.000003 0.000002 0.004929 0.001179 0.999 2
length{all}[17] 0.001565 0.000003 0.000001 0.004662 0.001034 1.000 2
length{all}[18] 0.010499 0.000063 0.000060 0.025666 0.009039 0.999 2
length{all}[19] 0.006783 0.000022 0.000074 0.015767 0.005682 1.000 2
length{all}[20] 0.009912 0.000065 0.000038 0.026865 0.008041 1.005 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.008009
Maximum standard deviation of split frequencies = 0.019315
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.005
Clade credibility values:
/------------------------------------------------------------------------ C1 (1)
|
|------------------------------------------------------------------------ C2 (2)
|
|------------------------------------------------------------------------ C3 (3)
|
+ /------------------ C4 (4)
| /----------------100----------------+
| | \------------------ C5 (5)
| |
| | /------------------ C6 (6)
\--------99-------+ |
| /-------100-------+------------------ C7 (7)
| | |
\--------63-------+ \------------------ C8 (8)
|
\------------------------------------ C9 (9)
Phylogram (based on average branch lengths):
/----- C1 (1)
|
|------------------------------------------------------------------------ C2 (2)
|
|---------- C3 (3)
|
+ / C4 (4)
| /-----------+
| | \ C5 (5)
| |
| | /- C6 (6)
\------+ |
| /-----+- C7 (7)
| | |
\-+ \- C8 (8)
|
\--------- C9 (9)
|-------------| 0.050 expected changes per site
Calculating tree probabilities...
Credible sets of trees (40 trees sampled):
50 % credible set contains 6 trees
90 % credible set contains 18 trees
95 % credible set contains 23 trees
99 % credible set contains 28 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Tue Oct 25 21:15:09 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.06 sec, SCORE=1000, Nseq=9, Len=257
C1 MTDDSMDLSLDCVIAQPSSEIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C2 MTDDSMDLNLDCVIAQPSSEIVMMPLSPISTRKRRRHPKNKTRYAKRRFS
C3 MTDDSMDLSLDCVIAQPSSEIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C4 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C6 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C7 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C8 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
C9 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFT
******.********** ****************** ** *******:
C1 PVVPSDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C2 PLEPRDIIMCEKPTHCIRLVFDQSLRWLHFDGVKNILADYGVTFSSDLHV
C3 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C4 PVEPNDIIMCDKPTHCIRLVFDQSLRWVHFDGIKNILTDYDVIFNPDLHV
C5 PVEPNDIIMCDKPTHCIRLVFDQSLRWVHFDGIKNILTDYDVIFNPDLHV
C6 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C7 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C8 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
C9 PVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHV
*: * *****:****************:****:****:**.* *..****
C1 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C2 TVALVCAGNGVTFSDLTPLTFLLADMLLEFNGISTLGQTLVIGVREYPWL
C3 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFNLGQTLVIGAREYCWL
C4 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C5 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C6 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C7 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C8 TVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWL
C9 TIALVCAGNGVTFSDLTPLTFILAEMLLEFNGNFTLGQTLVIGAREYHWL
*:*******************:**:******* .********.*** **
C1 PQELKTNVGKAIPQSKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C2 PKDLKSNVGQAIPQSKEWLVEHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C3 PQELKANVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDSVQQSY
C4 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C5 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C6 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C7 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C8 PQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
C9 PQELKTNVGKAIPQAKEWLVHHGYNVYHTGLPTHMSLAKLHSLDFVQQSY
*::**:***:****:*****.*********************** *****
C1 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C2 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C3 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C4 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C5 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C6 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C7 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C8 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
C9 VGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHY
**************************************************
C1 RACFPGR
C2 RACFPGR
C3 RACFPGR
C4 RACFPGR
C5 RACFPGR
C6 RACFPGR
C7 RACFPGR
C8 RACFPGR
C9 RACFPGR
*******
-- Starting log on Tue Oct 25 21:56:24 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5.result/original_alignment/codeml,TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C1 771 sites
reading seq# 2 C2 771 sites
reading seq# 3 C3 771 sites
reading seq# 4 C4 771 sites
reading seq# 5 C5 771 sites
reading seq# 6 C6 771 sites
reading seq# 7 C7 771 sites
reading seq# 8 C8 771 sites
reading seq# 9 C9 771 sitesns = 9 ls = 771
Reading sequences, sequential format..
Reading seq # 1: C1
Reading seq # 2: C2
Reading seq # 3: C3
Reading seq # 4: C4
Reading seq # 5: C5
Reading seq # 6: C6
Reading seq # 7: C7
Reading seq # 8: C8
Reading seq # 9: C9
Sites with gaps or missing data are removed.
3 ambiguity characters in seq. 4
3 ambiguity characters in seq. 5
3 ambiguity characters in seq. 6
3 ambiguity characters in seq. 7
3 ambiguity characters in seq. 8
3 ambiguity characters in seq. 9
1 sites are removed. 1
Sequences read..
Counting site patterns.. 0:00
Compressing, 152 patterns at 256 / 256 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 152 patterns at 256 / 256 sites (100.0%), 0:00
Counting codons..
288 bytes for distance
148352 bytes for conP
13376 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(1, 2, 3, ((4, 5), ((6, 7, 8), 9))); MP score: 155
370880 bytes for conP, adjusted
0.067848 0.105257 0.101954 0.096815 0.044268 0.057858 0.108542 0.016155 0.101639 0.045800 0.097415 0.088272 0.065686 0.300000 0.782691 0.539337
ntime & nrate & np: 13 2 16
Bounds (np=16):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 11.548088
np = 16
lnL0 = -2114.569488
Iterating by ming2
Initial: fx= 2114.569488
x= 0.06785 0.10526 0.10195 0.09682 0.04427 0.05786 0.10854 0.01615 0.10164 0.04580 0.09742 0.08827 0.06569 0.30000 0.78269 0.53934
1 h-m-p 0.0000 0.0002 822.8830 +++ 2009.066350 m 0.0002 22 | 1/16
2 h-m-p 0.0000 0.0000 1157.2515 ++ 1993.088173 m 0.0000 41 | 2/16
3 h-m-p 0.0000 0.0000 5932.4300 ++ 1963.781880 m 0.0000 60 | 3/16
4 h-m-p 0.0000 0.0000 8507.3905 ++ 1957.606683 m 0.0000 79 | 4/16
5 h-m-p 0.0000 0.0000 100548.5534 ++ 1953.905636 m 0.0000 98 | 5/16
6 h-m-p 0.0000 0.0003 1400.6113 +++ 1861.110801 m 0.0003 118 | 5/16
7 h-m-p 0.0000 0.0000 932.9765
h-m-p: 0.00000000e+00 0.00000000e+00 9.32976541e+02 1861.110801
.. | 5/16
8 h-m-p 0.0000 0.0008 526.5916 ++YCCCC 1841.721624 4 0.0003 162 | 5/16
9 h-m-p 0.0001 0.0003 354.4829 +CCYC 1827.371583 3 0.0002 187 | 5/16
10 h-m-p 0.0001 0.0007 191.6317 +CCYC 1819.354090 3 0.0006 212 | 5/16
11 h-m-p 0.0001 0.0003 840.9999 YCYC 1814.733774 3 0.0001 235 | 5/16
12 h-m-p 0.0005 0.0035 199.5515 CYCCC 1811.316666 4 0.0004 261 | 5/16
13 h-m-p 0.0010 0.0049 58.9939 CYCCC 1808.939787 4 0.0017 287 | 5/16
14 h-m-p 0.0004 0.0066 239.8615 +YYCC 1803.090928 3 0.0013 311 | 5/16
15 h-m-p 0.0006 0.0031 205.7716 CYC 1801.005184 2 0.0006 333 | 5/16
16 h-m-p 0.0008 0.0042 35.7116 YCCC 1800.807876 3 0.0005 357 | 5/16
17 h-m-p 0.0034 0.0227 5.0221 YC 1800.796583 1 0.0006 377 | 5/16
18 h-m-p 0.0089 0.4653 0.3639 ++YYCC 1799.769286 3 0.1270 402 | 5/16
19 h-m-p 0.0007 0.0069 65.1217 +YYYCCC 1794.205682 5 0.0029 440 | 5/16
20 h-m-p 1.1131 6.5382 0.1668 CCCC 1792.104341 3 1.8111 465 | 5/16
21 h-m-p 1.6000 8.0000 0.0852 CCC 1791.797020 2 1.4392 499 | 5/16
22 h-m-p 1.6000 8.0000 0.0478 CCC 1791.708129 2 1.3926 533 | 5/16
23 h-m-p 1.6000 8.0000 0.0343 CC 1791.662557 1 1.4995 565 | 5/16
24 h-m-p 1.6000 8.0000 0.0146 CC 1791.646923 1 1.5218 597 | 5/16
25 h-m-p 1.6000 8.0000 0.0022 CC 1791.645070 1 1.3179 629 | 5/16
26 h-m-p 1.6000 8.0000 0.0005 Y 1791.644989 0 1.0963 659 | 5/16
27 h-m-p 1.6000 8.0000 0.0001 Y 1791.644989 0 1.0578 689 | 5/16
28 h-m-p 1.6000 8.0000 0.0000 Y 1791.644989 0 1.1155 719 | 5/16
29 h-m-p 1.6000 8.0000 0.0000 Y 1791.644989 0 0.7419 749 | 5/16
30 h-m-p 1.6000 8.0000 0.0000 --------Y 1791.644989 0 0.0000 787
Out..
lnL = -1791.644989
788 lfun, 2364 eigenQcodon, 20488 P(t)
end of tree file.
Time used: 0:09
Model 2: PositiveSelection
TREE # 1
(1, 2, 3, ((4, 5), ((6, 7, 8), 9))); MP score: 155
0.026358 0.065700 0.057102 0.087265 0.058513 0.074014 0.105334 0.062502 0.074221 0.013734 0.012471 0.060181 0.035577 2.013891 0.844208 0.291445 0.430870 1.343405
ntime & nrate & np: 13 3 18
Bounds (np=18):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 5.496390
np = 18
lnL0 = -2026.053330
Iterating by ming2
Initial: fx= 2026.053330
x= 0.02636 0.06570 0.05710 0.08727 0.05851 0.07401 0.10533 0.06250 0.07422 0.01373 0.01247 0.06018 0.03558 2.01389 0.84421 0.29144 0.43087 1.34341
1 h-m-p 0.0000 0.0001 1112.9451 ++ 1975.326218 m 0.0001 23 | 1/18
2 h-m-p 0.0000 0.0000 644.8842 ++ 1973.953693 m 0.0000 44 | 2/18
3 h-m-p 0.0000 0.0000 42454.5098 ++ 1935.284770 m 0.0000 65 | 3/18
4 h-m-p 0.0000 0.0000 7421.7773 ++ 1927.872619 m 0.0000 86 | 4/18
5 h-m-p 0.0000 0.0000 1005.8094 ++ 1918.952095 m 0.0000 107 | 5/18
6 h-m-p 0.0002 0.0033 125.5963 ++YYYYYC 1904.857421 5 0.0024 135 | 5/18
7 h-m-p 0.0000 0.0001 1622.4471 ++ 1895.166233 m 0.0001 156 | 6/18
8 h-m-p 0.0011 0.0054 34.5729 CYCCC 1893.895591 4 0.0018 184 | 6/18
9 h-m-p 0.0001 0.0004 451.7719 CYCCC 1892.254681 4 0.0002 212 | 6/18
10 h-m-p 0.0000 0.0002 980.9574 +CYCCC 1886.028864 4 0.0002 241 | 6/18
11 h-m-p 0.0001 0.0005 64.4037 +YCCC 1885.452782 3 0.0003 268 | 6/18
12 h-m-p 0.0004 0.0038 47.5795 +YCCCC 1881.257164 4 0.0028 297 | 6/18
13 h-m-p 0.0002 0.0010 31.3594 ++ 1880.543317 m 0.0010 318 | 7/18
14 h-m-p 0.0024 0.1996 9.0187 +++YYCCCC 1864.707073 5 0.1170 350 | 7/18
15 h-m-p 0.0438 0.9396 24.0681 +YCCCCC 1836.696788 5 0.1100 381 | 6/18
16 h-m-p 0.0016 0.0080 953.7173 -YCCC 1835.538033 3 0.0002 408 | 6/18
17 h-m-p 0.0345 0.7883 4.6998 +YCYCCC 1825.974718 5 0.3096 438 | 6/18
18 h-m-p 0.1905 0.9524 0.7958 +YYCCCC 1810.141181 5 0.6462 468 | 6/18
19 h-m-p 1.2261 6.1307 0.3714 CYCC 1800.303834 3 1.3296 506 | 5/18
20 h-m-p 0.3454 5.8300 1.4297 CYCCC 1798.938264 4 0.3998 546 | 5/18
21 h-m-p 0.1564 0.7819 0.9443 +CYCC 1795.031456 3 0.5762 573 | 5/18
22 h-m-p 0.2413 1.2065 0.1696 +YC 1793.859532 1 1.0166 609 | 5/18
23 h-m-p 1.3108 8.0000 0.1316 YCCC 1792.795141 3 2.9867 648 | 5/18
24 h-m-p 0.1663 0.8316 0.2050 ++ 1792.507220 m 0.8316 682 | 5/18
25 h-m-p -0.0000 -0.0000 0.3215
h-m-p: -0.00000000e+00 -0.00000000e+00 3.21500565e-01 1792.507220
.. | 5/18
26 h-m-p 0.0000 0.0027 166.1106 +YYCCC 1791.957710 4 0.0001 754 | 5/18
27 h-m-p 0.0002 0.0023 38.8010 CCC 1791.752050 2 0.0003 779 | 5/18
28 h-m-p 0.0007 0.0039 15.1829 CY 1791.734161 1 0.0002 802 | 5/18
29 h-m-p 0.0008 0.0627 3.5101 YC 1791.732247 1 0.0003 824 | 5/18
30 h-m-p 0.0005 0.1771 2.4018 +C 1791.728032 0 0.0020 846 | 5/18
31 h-m-p 0.0007 0.0725 6.6805 CC 1791.724709 1 0.0007 869 | 5/18
32 h-m-p 0.0015 0.2161 2.8743 YC 1791.723508 1 0.0007 891 | 5/18
33 h-m-p 0.0004 0.1366 4.7057 +YC 1791.713462 1 0.0041 914 | 5/18
34 h-m-p 0.0004 0.0661 49.5810 +CCC 1791.654101 2 0.0023 940 | 5/18
35 h-m-p 0.0013 0.0065 1.2958 +YC 1791.652301 1 0.0040 963 | 5/18
36 h-m-p 0.0001 0.0003 10.2222 ++ 1791.650254 m 0.0003 984 | 6/18
37 h-m-p 0.0031 1.5668 1.1355 C 1791.650147 0 0.0044 1005 | 6/18
38 h-m-p 0.5558 8.0000 0.0090 YC 1791.649408 1 0.3971 1027 | 6/18
39 h-m-p 0.3417 8.0000 0.0105 ---------------.. | 6/18
40 h-m-p 0.0000 0.0064 2.3623 +YC 1791.649128 1 0.0001 1108 | 6/18
41 h-m-p 0.0003 0.1720 0.7517 C 1791.649040 0 0.0003 1129 | 6/18
42 h-m-p 0.0008 0.4023 0.6488 C 1791.649010 0 0.0002 1162 | 6/18
43 h-m-p 0.0029 1.4647 0.3519 +YC 1791.648672 1 0.0081 1197 | 6/18
44 h-m-p 0.0021 1.0579 8.6579 C 1791.646481 0 0.0022 1230 | 6/18
45 h-m-p 0.0011 0.0743 17.6398 CC 1791.645609 1 0.0004 1253 | 6/18
46 h-m-p 0.0055 0.4697 1.3674 C 1791.645401 0 0.0014 1274 | 6/18
47 h-m-p 0.0008 0.3774 2.9141 C 1791.645216 0 0.0006 1295 | 6/18
48 h-m-p 0.0015 0.2378 1.2326 C 1791.645170 0 0.0004 1316 | 6/18
49 h-m-p 0.0087 3.1292 0.0564 C 1791.645166 0 0.0025 1337 | 6/18
50 h-m-p 0.0135 6.7272 0.4191 C 1791.644989 0 0.0172 1370 | 6/18
51 h-m-p 1.6000 8.0000 0.0001 Y 1791.644989 0 1.0072 1403 | 6/18
52 h-m-p 1.6000 8.0000 0.0000 C 1791.644989 0 1.6000 1436 | 6/18
53 h-m-p 1.6000 8.0000 0.0000 -----Y 1791.644989 0 0.0004 1474
Out..
lnL = -1791.644989
1475 lfun, 5900 eigenQcodon, 57525 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -1801.502309 S = -1722.596301 -103.372534
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 152 patterns 0:34
did 20 / 152 patterns 0:34
did 30 / 152 patterns 0:34
did 40 / 152 patterns 0:34
did 50 / 152 patterns 0:34
did 60 / 152 patterns 0:34
did 70 / 152 patterns 0:34
did 80 / 152 patterns 0:34
did 90 / 152 patterns 0:34
did 100 / 152 patterns 0:34
did 110 / 152 patterns 0:34
did 120 / 152 patterns 0:35
did 130 / 152 patterns 0:35
did 140 / 152 patterns 0:35
did 150 / 152 patterns 0:35
did 152 / 152 patterns 0:35end of tree file.
Time used: 0:35
Model 7: beta
TREE # 1
(1, 2, 3, ((4, 5), ((6, 7, 8), 9))); MP score: 155
0.070411 0.106597 0.042550 0.089732 0.031457 0.048046 0.031636 0.070986 0.030388 0.105355 0.058437 0.075468 0.027458 2.013890 0.968602 1.595650
ntime & nrate & np: 13 1 16
Bounds (np=16):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 8.758919
np = 16
lnL0 = -1970.618532
Iterating by ming2
Initial: fx= 1970.618532
x= 0.07041 0.10660 0.04255 0.08973 0.03146 0.04805 0.03164 0.07099 0.03039 0.10535 0.05844 0.07547 0.02746 2.01389 0.96860 1.59565
1 h-m-p 0.0000 0.0001 889.6987 ++ 1891.886606 m 0.0001 21 | 1/16
2 h-m-p 0.0000 0.0000 834.0092 ++ 1873.285905 m 0.0000 40 | 2/16
3 h-m-p 0.0000 0.0000 3375.7711 ++ 1865.059177 m 0.0000 59 | 3/16
4 h-m-p 0.0000 0.0000 169494.6472 ++ 1855.550292 m 0.0000 78 | 4/16
5 h-m-p 0.0000 0.0001 287.2876 ++ 1847.307358 m 0.0001 97 | 5/16
6 h-m-p 0.0001 0.0006 190.1678 +YCYCCC 1841.557717 5 0.0005 126 | 5/16
7 h-m-p 0.0002 0.0012 142.2914 CYCCC 1839.547351 4 0.0004 152 | 5/16
8 h-m-p 0.0002 0.0008 132.1497 +YYCCC 1837.103221 4 0.0006 178 | 5/16
9 h-m-p 0.0002 0.0017 494.6902 +YYCYYYYYYY 1812.903274 10 0.0012 208 | 5/16
10 h-m-p 0.0000 0.0002 1518.2848 CYCCCC 1810.756585 5 0.0000 236 | 5/16
11 h-m-p 0.0048 0.0239 12.4782 YCC 1810.435162 2 0.0027 258 | 5/16
12 h-m-p 0.0003 0.0058 101.2274 YCCC 1809.773451 3 0.0007 282 | 5/16
13 h-m-p 0.0057 0.2227 12.9609 +YCCC 1806.788256 3 0.0417 307 | 5/16
14 h-m-p 0.2223 1.1115 2.0236 CYCCCC 1800.966542 5 0.3703 335 | 5/16
15 h-m-p 0.2354 1.5762 3.1837 YYCCC 1795.243623 4 0.2971 360 | 5/16
16 h-m-p 0.2902 1.4511 0.2098 CYCCC 1793.828962 4 0.5150 386 | 5/16
17 h-m-p 0.3878 6.4532 0.2786 +YYYC 1792.904243 3 1.3743 420 | 5/16
18 h-m-p 1.6000 8.0000 0.1807 CYCCC 1792.419014 4 2.4975 457 | 5/16
19 h-m-p 0.6345 3.1723 0.4493 CYCCC 1792.091305 4 1.1216 494 | 5/16
20 h-m-p 1.6000 8.0000 0.0822 YCCC 1791.954738 3 0.8607 529 | 5/16
21 h-m-p 0.6294 8.0000 0.1124 CC 1791.836293 1 0.7377 561 | 5/16
22 h-m-p 1.1052 8.0000 0.0750 C 1791.795929 0 1.1063 591 | 5/16
23 h-m-p 0.9377 8.0000 0.0885 CCC 1791.780785 2 0.7277 625 | 5/16
24 h-m-p 1.6000 8.0000 0.0153 YC 1791.776555 1 1.0617 656 | 5/16
25 h-m-p 1.6000 8.0000 0.0042 C 1791.776183 0 1.3886 686 | 5/16
26 h-m-p 1.6000 8.0000 0.0003 Y 1791.776116 0 1.2786 716 | 5/16
27 h-m-p 1.4035 8.0000 0.0003 Y 1791.776087 0 2.8356 746 | 5/16
28 h-m-p 1.6000 8.0000 0.0002 C 1791.776081 0 1.2855 776 | 5/16
29 h-m-p 1.6000 8.0000 0.0000 Y 1791.776080 0 3.3482 806 | 5/16
30 h-m-p 1.6000 8.0000 0.0000 Y 1791.776080 0 1.0699 836 | 5/16
31 h-m-p 1.6000 8.0000 0.0000 C 1791.776080 0 2.3950 866 | 5/16
32 h-m-p 1.6000 8.0000 0.0000 Y 1791.776080 0 1.0623 896 | 5/16
33 h-m-p 1.6000 8.0000 0.0000 -Y 1791.776080 0 0.1000 927
Out..
lnL = -1791.776080
928 lfun, 10208 eigenQcodon, 120640 P(t)
end of tree file.
Time used: 1:26
Model 8: beta&w>1
TREE # 1
(1, 2, 3, ((4, 5), ((6, 7, 8), 9))); MP score: 155
0.103429 0.026088 0.089360 0.108290 0.017240 0.089685 0.106158 0.057086 0.062098 0.064217 0.091272 0.066406 0.038961 1.983085 0.900000 0.962340 1.057208 1.300000
ntime & nrate & np: 13 2 18
Bounds (np=18):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 6.999823
np = 18
lnL0 = -2100.533854
Iterating by ming2
Initial: fx= 2100.533854
x= 0.10343 0.02609 0.08936 0.10829 0.01724 0.08969 0.10616 0.05709 0.06210 0.06422 0.09127 0.06641 0.03896 1.98309 0.90000 0.96234 1.05721 1.30000
1 h-m-p 0.0000 0.0003 2659.7282 +++ 1899.488619 m 0.0003 24 | 1/18
2 h-m-p 0.0000 0.0000 457.8609 ++ 1897.369752 m 0.0000 45 | 2/18
3 h-m-p 0.0000 0.0000 208519.7780 ++ 1878.406286 m 0.0000 66 | 3/18
4 h-m-p 0.0000 0.0000 543.4164 ++ 1876.283432 m 0.0000 87 | 4/18
5 h-m-p 0.0000 0.0000 470.9175 ++ 1871.771549 m 0.0000 108 | 5/18
6 h-m-p 0.0000 0.0008 310.4272 +++ 1857.062719 m 0.0008 130 | 5/18
7 h-m-p 0.0000 0.0000 307.7469
h-m-p: 7.25890781e-20 3.62945390e-19 3.07746882e+02 1857.062719
.. | 5/18
8 h-m-p 0.0000 0.0001 804.7189 +YCYCCC 1853.936018 5 0.0000 178 | 5/18
9 h-m-p 0.0000 0.0001 175.5698 ++ 1851.398438 m 0.0001 199 | 6/18
10 h-m-p 0.0001 0.0007 281.4048 +CYCCCC 1844.080549 5 0.0004 230 | 6/18
11 h-m-p 0.0002 0.0009 346.7248 YCYCCC 1834.423440 5 0.0005 259 | 6/18
12 h-m-p 0.0001 0.0007 1159.4229 +YCYCCC 1805.172632 5 0.0004 289 | 6/18
13 h-m-p 0.0004 0.0018 162.0717 CYCCCC 1802.110207 5 0.0005 319 | 6/18
14 h-m-p 0.0003 0.0016 125.7784 YYCCCC 1800.904288 5 0.0003 348 | 6/18
15 h-m-p 0.0017 0.0107 24.6348 CCC 1800.750797 2 0.0006 373 | 5/18
16 h-m-p 0.0001 0.0041 114.1366 YYC 1800.167709 2 0.0002 396 | 5/18
17 h-m-p 0.0018 0.0805 10.2106 +YCCC 1799.165653 3 0.0173 423 | 5/18
18 h-m-p 0.0006 0.0058 302.2592 YCCC 1797.228524 3 0.0013 449 | 5/18
19 h-m-p 0.0370 0.1852 1.6792 ++ 1794.476343 m 0.1852 470 | 5/18
20 h-m-p 0.2678 2.3785 1.1612 YCC 1793.218455 2 0.4367 494 | 5/18
21 h-m-p 0.3616 2.5466 1.4024 CYC 1792.385576 2 0.3381 518 | 5/18
22 h-m-p 0.3041 1.5206 0.4041 +YCC 1791.861313 2 1.0184 543 | 5/18
23 h-m-p 1.3752 6.8758 0.0353 CC 1791.750083 1 1.4766 579 | 5/18
24 h-m-p 1.6000 8.0000 0.0287 CCC 1791.724908 2 1.4629 617 | 5/18
25 h-m-p 1.6000 8.0000 0.0168 CC 1791.712873 1 2.0983 653 | 5/18
26 h-m-p 0.3075 1.5374 0.0636 +YC 1791.708249 1 0.9068 689 | 5/18
27 h-m-p 1.6000 8.0000 0.0072 CC 1791.703048 1 1.3332 725 | 5/18
28 h-m-p 0.3041 1.5205 0.0273 ++ 1791.699681 m 1.5205 759 | 5/18
29 h-m-p -0.0000 -0.0000 0.0130
h-m-p: -0.00000000e+00 -0.00000000e+00 1.29791303e-02 1791.699681
.. | 5/18
30 h-m-p 0.0002 0.0899 1.6504 C 1791.699460 0 0.0002 824 | 5/18
31 h-m-p 0.0002 0.0319 1.3414 C 1791.699332 0 0.0002 845 | 5/18
32 h-m-p 0.0005 0.2499 0.6537 C 1791.699234 0 0.0006 866 | 5/18
33 h-m-p 0.0008 0.3597 0.5224 YC 1791.699121 1 0.0014 901 | 5/18
34 h-m-p 0.0031 0.7838 0.2404 -Y 1791.699113 0 0.0004 936 | 5/18
35 h-m-p 0.0011 0.1130 0.0845 +C 1791.699094 0 0.0067 971 | 5/18
36 h-m-p 0.0003 0.0043 1.7653 +YC 1791.698953 1 0.0023 1007 | 5/18
37 h-m-p 0.0001 0.0006 4.7203 ++ 1791.698847 m 0.0006 1028 | 6/18
38 h-m-p 0.0030 1.5059 3.1534 YC 1791.698058 1 0.0075 1050 | 6/18
39 h-m-p 0.0024 1.2060 51.9689 +CCCC 1791.672987 3 0.0121 1078 | 6/18
40 h-m-p 0.0066 0.0848 94.8186 -C 1791.671514 0 0.0005 1100 | 6/18
41 h-m-p 0.0417 8.0000 1.0678 ++YC 1791.656658 1 0.4368 1124 | 6/18
42 h-m-p 0.7695 8.0000 0.6062 CC 1791.652761 1 0.2200 1147 | 6/18
43 h-m-p 0.2678 8.0000 0.4981 +CCC 1791.640642 2 1.3231 1185 | 6/18
44 h-m-p 1.6000 8.0000 0.2639 CC 1791.627309 1 1.5630 1220 | 6/18
45 h-m-p 0.7040 8.0000 0.5859 +YC 1791.617747 1 1.7625 1255 | 6/18
46 h-m-p 1.6000 8.0000 0.3795 +YC 1791.611492 1 4.1396 1290 | 6/18
47 h-m-p 1.6000 8.0000 0.8316 YC 1791.609128 1 0.9760 1324 | 6/18
48 h-m-p 1.6000 8.0000 0.2652 C 1791.608559 0 1.6000 1357 | 6/18
49 h-m-p 1.2687 8.0000 0.3345 YC 1791.608143 1 2.8049 1391 | 6/18
50 h-m-p 1.6000 8.0000 0.0605 C 1791.608102 0 1.2869 1424 | 6/18
51 h-m-p 0.9091 8.0000 0.0857 Y 1791.608090 0 1.8209 1457 | 6/18
52 h-m-p 1.6000 8.0000 0.0055 C 1791.608084 0 2.1572 1490 | 6/18
53 h-m-p 0.4627 8.0000 0.0254 +Y 1791.608083 0 1.4552 1524 | 6/18
54 h-m-p 1.6000 8.0000 0.0024 Y 1791.608083 0 1.0529 1557 | 6/18
55 h-m-p 1.6000 8.0000 0.0001 C 1791.608083 0 1.6000 1590 | 6/18
56 h-m-p 1.6000 8.0000 0.0001 C 1791.608083 0 0.4000 1623 | 6/18
57 h-m-p 0.8900 8.0000 0.0000 --------------Y 1791.608083 0 0.0000 1670
Out..
lnL = -1791.608083
1671 lfun, 20052 eigenQcodon, 238953 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -1802.753160 S = -1722.750979 -87.208190
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 152 patterns 3:07
did 20 / 152 patterns 3:08
did 30 / 152 patterns 3:08
did 40 / 152 patterns 3:08
did 50 / 152 patterns 3:08
did 60 / 152 patterns 3:08
did 70 / 152 patterns 3:09
did 80 / 152 patterns 3:09
did 90 / 152 patterns 3:09
did 100 / 152 patterns 3:09
did 110 / 152 patterns 3:09
did 120 / 152 patterns 3:10
did 130 / 152 patterns 3:10
did 140 / 152 patterns 3:10
did 150 / 152 patterns 3:10
did 152 / 152 patterns 3:10end of tree file.
Time used: 3:10
The loglikelihoods for models M1, M2, M7 and M8 are -1791.644989 -1791.644989 -1791.776080 -1791.608083 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
BY140535_orf4b_AWH65913_1_2014_06_26_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 MTDDSMDLSLDCVIAQPSSEIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVVPSDIIMC
BtPa_GD2013_NA_AIA62346_1_2013_China_Bat_Pipistrellus_bat_coronavirus_HKU5 MTDDSMDLNLDCVIAQPSSEIVMMPLSPISTRKRRRHPKNKTRYAKRRFSPLEPRDIIMC
BY140562_orf4b_AWH65924_1_2014_06_28_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 MTDDSMDLSLDCVIAQPSSEIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMC
HKU5_1_LMH03f_NS3c_YP_001039965_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMC
LMH03f_NS3c_ABN10878_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMC
TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMC
TT06f_NS3c_ABN10896_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMC
TT07f_NS3c_ABN10905_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMC
YD13403_orf4b_AWH65935_1_2013_06_03_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMC
******.********** ****************** ** *******:*: * *****
BY140535_orf4b_AWH65913_1_2014_06_26_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 EKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLT
BtPa_GD2013_NA_AIA62346_1_2013_China_Bat_Pipistrellus_bat_coronavirus_HKU5 EKPTHCIRLVFDQSLRWLHFDGVKNILADYGVTFSSDLHVTVALVCAGNGVTFSDLTPLT
BY140562_orf4b_AWH65924_1_2014_06_28_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 EKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLT
HKU5_1_LMH03f_NS3c_YP_001039965_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 DKPTHCIRLVFDQSLRWVHFDGIKNILTDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLT
LMH03f_NS3c_ABN10878_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 DKPTHCIRLVFDQSLRWVHFDGIKNILTDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLT
TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 EKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLT
TT06f_NS3c_ABN10896_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 EKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLT
TT07f_NS3c_ABN10905_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 EKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLT
YD13403_orf4b_AWH65935_1_2013_06_03_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 EKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHVTIALVCAGNGVTFSDLTPLT
:****************:****:****:**.* *..*****:******************
BY140535_orf4b_AWH65913_1_2014_06_26_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 FILADMLLEFNGIFTLGQTLVIGAREYHWLPQELKTNVGKAIPQSKEWLVDHGYNVYHTG
BtPa_GD2013_NA_AIA62346_1_2013_China_Bat_Pipistrellus_bat_coronavirus_HKU5 FLLADMLLEFNGISTLGQTLVIGVREYPWLPKDLKSNVGQAIPQSKEWLVEHGYNVYHTG
BY140562_orf4b_AWH65924_1_2014_06_28_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 FILADMLLEFNGIFNLGQTLVIGAREYCWLPQELKANVGKAIPQAKEWLVDHGYNVYHTG
HKU5_1_LMH03f_NS3c_YP_001039965_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 FILADMLLEFNGIFTLGQTLVIGAREYHWLPQELKTNVGKAIPQAKEWLVDHGYNVYHTG
LMH03f_NS3c_ABN10878_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 FILADMLLEFNGIFTLGQTLVIGAREYHWLPQELKTNVGKAIPQAKEWLVDHGYNVYHTG
TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 FILADMLLEFNGIFTLGQTLVIGAREYHWLPQELKTNVGKAIPQAKEWLVDHGYNVYHTG
TT06f_NS3c_ABN10896_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 FILADMLLEFNGIFTLGQTLVIGAREYHWLPQELKTNVGKAIPQAKEWLVDHGYNVYHTG
TT07f_NS3c_ABN10905_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 FILADMLLEFNGIFTLGQTLVIGAREYHWLPQELKTNVGKAIPQAKEWLVDHGYNVYHTG
YD13403_orf4b_AWH65935_1_2013_06_03_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 FILAEMLLEFNGNFTLGQTLVIGAREYHWLPQELKTNVGKAIPQAKEWLVHHGYNVYHTG
*:**:******* .********.*** ***::**:***:****:*****.*********
BY140535_orf4b_AWH65913_1_2014_06_26_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 LPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQ
BtPa_GD2013_NA_AIA62346_1_2013_China_Bat_Pipistrellus_bat_coronavirus_HKU5 LPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQ
BY140562_orf4b_AWH65924_1_2014_06_28_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 LPTHMSLAKLHSLDSVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQ
HKU5_1_LMH03f_NS3c_YP_001039965_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 LPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQ
LMH03f_NS3c_ABN10878_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 LPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQ
TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 LPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQ
TT06f_NS3c_ABN10896_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 LPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQ
TT07f_NS3c_ABN10905_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 LPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQ
YD13403_orf4b_AWH65935_1_2013_06_03_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 LPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQ
************** *********************************************
BY140535_orf4b_AWH65913_1_2014_06_26_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 YPIHNHYRHYRACFPGR
BtPa_GD2013_NA_AIA62346_1_2013_China_Bat_Pipistrellus_bat_coronavirus_HKU5 YPIHNHYRHYRACFPGR
BY140562_orf4b_AWH65924_1_2014_06_28_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 YPIHNHYRHYRACFPGR
HKU5_1_LMH03f_NS3c_YP_001039965_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 YPIHNHYRHYRACFPGR
LMH03f_NS3c_ABN10878_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 YPIHNHYRHYRACFPGR
TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 YPIHNHYRHYRACFPGR
TT06f_NS3c_ABN10896_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 YPIHNHYRHYRACFPGR
TT07f_NS3c_ABN10905_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 YPIHNHYRHYRACFPGR
YD13403_orf4b_AWH65935_1_2013_06_03_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 YPIHNHYRHYRACFPGR
*****************
>BY140535_orf4b_AWH65913_1_2014_06_26_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 ATGACGGACGACTCGATGGATTTGAGCTTAGACTGCGTTATAGCACAGCCTTCCAGCGAAATCGTTATGATGCCTCTAAGTCCTATTTCTACACGCAAACGTCGTCGTCATCCAATGAATAAAAGACGCTATGCTAAGCGCCGTTTTACTCCTGTTGTGCCGAGCGATATCATAATGTGTGAAAAACCCACACATTGCATTCGCTTGGTTTTCGACCAATCATTACGCTGGGTGCATTTTGATGGTATCAAAAACATCCTCAGTGATTATGATGTTATCTTCAACCCTGATTTACACGTTACTGTTGCATTAGTTTGCGCAGGTAACGGTGTTACATTCAGTGATCTCACACCACTAACATTCATTCTAGCTGACATGCTGCTTGAATTTAATGGTATCTTTACTTTGGGACAGACTTTGGTCATTGGTGCTCGTGAGTACCACTGGCTACCACAAGAGCTCAAAACTAATGTGGGCAAAGCTATCCCTCAGTCTAAAGAATGGCTTGTAGATCATGGTTACAACGTGTACCATACAGGCCTTCCTACTCATATGTCGCTTGCAAAGCTGCATTCTTTAGACTTTGTCCAACAATCTTACGTTGGCAGCAAGTTCTTTATTAAACATTCTCACACCACCGAATATGCTATGCCTGTTTGTTTACAGGTAATAGCTATTGATGGTGAGAAAGTTGATGGTCGATCGAAACCCTTGTTTCAGTATCCCATCCATAATCATTACAGACACTATCGTGCCTGCTTTCCTGGCCGC >BtPa_GD2013_NA_AIA62346_1_2013_China_Bat_Pipistrellus_bat_coronavirus_HKU5 ATGACGGACGACTCGATGGATTTGAACTTAGACTGCGTTATAGCACAGCCTTCCAGCGAAATCGTTATGATGCCTCTAAGTCCTATTTCTACACGAAAACGCCGTCGTCACCCGAAGAATAAAACGCGCTATGCAAAGCGCCGTTTTAGTCCTCTTGAACCTCGCGATATTATAATGTGTGAAAAGCCTACCCATTGTATTCGCTTGGTTTTCGACCAATCCTTGAGATGGTTGCATTTTGATGGCGTCAAAAACATCCTTGCTGATTATGGCGTCACATTTTCCTCTGATTTACACGTTACAGTGGCATTAGTTTGCGCAGGTAATGGTGTTACATTCAGTGATTTAACACCACTAACATTCTTACTAGCTGACATGCTACTGGAATTTAATGGTATTTCTACTTTGGGACAGACCTTAGTCATTGGTGTGCGCGAGTACCCATGGCTACCAAAAGACCTTAAATCTAATGTAGGTCAGGCTATCCCTCAGTCCAAAGAATGGCTTGTAGAACATGGTTACAACGTGTACCATACAGGCCTTCCAACTCATATGTCGCTTGCAAAGCTTCACTCATTAGATTTTGTCCAACAGTCCTATGTTGGCAGCAAATTTTTCATTAAACATTCTCACACCACTGAATATGCTATGCCTGTTTGTTTACAGGTAATAGCTATTGACGGTGAGAAAGTTGATGGTCGATCGAAACCTTTGTTTCAGTATCCCATTCATAATCATTACAGACACTATCGTGCCTGCTTTCCTGGCCGC >BY140562_orf4b_AWH65924_1_2014_06_28_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 ATGACGGACGACTCGATGGATTTGAGCTTAGACTGCGTTATAGCACAGCCTTCCAGCGAAATCGTTATGATGCCTCTAAGTCCTATTTCTACACGGAAACGTCGTCGTCATCCAATGAATAAAAGACGCTACGCTAAGCGCCGTTTTACTCCTGTTGAGCCAAACGACATCATAATGTGTGAAAAACCCACACATTGCATTCGCTTGGTTTTCGACCAATCATTACGCTGGGTGCATTTTGATGGTATCAAAAACATCCTCAGTGATTATGATGTTATCTTCAACCCTGATTTACACGTTACTGTAGCATTAGTTTGCGCAGGTAATGGTGTAACATTCAGTGATCTCACACCACTAACATTCATTCTAGCTGACATGCTGCTTGAATTTAATGGTATCTTCAATTTGGGACAGACTTTAGTCATTGGTGCTCGTGAGTACTGCTGGCTTCCACAGGAGCTCAAAGCTAATGTGGGCAAAGCTATCCCTCAGGCTAAAGAATGGCTTGTAGATCATGGCTACAATGTGTACCATACAGGCCTTCCAACTCATATGTCGCTTGCAAAGCTGCATTCATTAGACTCTGTCCAACAATCATATGTTGGCAGCAAGTTCTTTATTAAACATTCTCACACCACTGAATATGCTATGCCTGTTTGTCTACAGGTAATAGCTATTGATGGTGAGAAAGTTGATGGTCGATCGAAACCCCTGTTTCAGTATCCCATTCATAATCATTACAGACACTATCGTGCCTGCTTTCCTGGCCGC >HKU5_1_LMH03f_NS3c_YP_001039965_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 ---ATGGACGACTCGATGGATTTGGACTTAGACTGCGTTATAGCACAGCCTTCGAGCACAATCGTTATGATGCCTCTAAGTCCTATTTCTACACGCAAACGTCGTCGTCATCCCATGAATAAAAGACGCTACGCTAAGCGCCGTTTTACTCCTGTAGAGCCAAACGATATTATAATGTGTGATAAACCCACACATTGTATTCGCTTGGTTTTTGATCAATCATTACGCTGGGTGCATTTTGATGGTATCAAAAACATCCTCACTGATTATGATGTTATTTTTAACCCTGATTTACACGTTACTGTTGCTTTAGTTTGTGCAGGTAATGGTGTTACATTCAGTGATCTCACACCACTAACATTCATTCTAGCTGACATGCTGCTTGAATTTAATGGTATCTTTACTTTGGGACAGACTTTGGTCATTGGTGCTCGTGAGTACCATTGGCTACCACAAGAGCTTAAAACTAATGTGGGCAAAGCTATCCCTCAGGCTAAAGAATGGCTTGTAGATCATGGCTACAACGTGTACCATACAGGCCTTCCTACTCATATGTCGCTTGCAAAGCTTCATTCACTTGACTTCGTCCAACAATCATATGTTGGCAGTAAGTTCTTTATTAAGCATTCTCATACCACTGAATATGCTATGCCCGTTTGTTTACAGGTAATAGCTATTGATGGTGAGAAAGTTGATGGTCGATCGAAACCCCTGTTTCAGTATCCCATCCATAATCATTACAGACACTATCGTGCCTGCTTTCCTGGCCGC >LMH03f_NS3c_ABN10878_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 ---ATGGACGACTCGATGGATTTGGACTTAGACTGCGTTATAGCACAGCCTTCGAGCACAATCGTTATGATGCCTCTAAGTCCTATTTCTACACGCAAACGTCGTCGTCATCCCATGAATAAAAGACGCTACGCTAAGCGCCGTTTTACTCCTGTAGAGCCAAACGATATTATAATGTGTGATAAACCCACACATTGTATTCGCTTGGTTTTTGATCAATCATTACGCTGGGTGCATTTTGATGGTATCAAAAACATCCTCACTGATTATGATGTTATTTTTAACCCTGATTTACACGTTACTGTTGCTTTAGTTTGTGCAGGTAATGGTGTTACATTCAGTGATCTCACACCACTAACATTCATTCTAGCTGACATGCTGCTTGAATTTAATGGTATCTTTACTTTGGGACAGACTTTGGTCATTGGTGCTCGTGAGTACCATTGGCTACCACAAGAGCTTAAAACTAATGTGGGCAAAGCTATCCCTCAGGCTAAAGAATGGCTTGTAGATCATGGCTACAACGTGTACCATACAGGCCTTCCTACTCATATGTCGCTTGCAAAGCTTCATTCACTTGACTTCGTCCAACAATCATATGTTGGCAGTAAGTTCTTTATTAAGCATTCTCATACCACTGAATATGCTATGCCCGTTTGTTTACAGGTAATAGCTATTGATGGTGAGAAAGTTGATGGTCGATCGAAACCCCTGTTTCAGTATCCCATCCATAATCATTACAGACACTATCGTGCCTGCTTTCCTGGCCGC >TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 ---ATGGACGACTCGATGGATTTGGACTTAGACTGCGTTATAGCACAGCCTTCGAGCACAATCGTTATGATGCCTCTAAGTCCTATTTCTACACGGAAACGTCGTCGTCATCCGATGAATAAAAGACGCTATGCTAAGCGCCGTTTTACTCCTGTTGAGCCAAACGATATAATAATGTGTGAAAAACCCACACATTGTATTCGCTTGGTTTTCGACCAATCATTACGCTGGGTGCATTTTGATGGTATCAAAAACATCCTCAGTGATTATGATGTTATCTTTAACCCTGATTTACACGTTACTGTAGCATTAGTTTGCGCAGGTAACGGTGTTACATTCAGTGATCTCACACCACTAACATTCATTCTAGCTGACATGCTGCTTGAATTTAATGGCATCTTTACTTTGGGACAGACTTTGGTCATTGGTGCACGAGAGTACCATTGGCTACCACAAGAGCTCAAAACTAATGTGGGCAAAGCGATCCCTCAGGCTAAAGAATGGCTTGTAGACCATGGCTACAATGTGTACCATACAGGCCTTCCTACTCATATGTCGCTTGCAAAGCTGCATTCATTAGACTTCGTCCAACAATCATATGTTGGCAGTAAGTTCTTTATTAAACATTCTCACACCACCGAATACGCTATGCCTGTTTGCTTACAGGTAATAGCTATTGATGGTGAGAAAGTTGATGGTCGATCGAAACCTCTGTTTCAGTATCCCATCCATAATCACTACAGACACTATCGTGCCTGCTTTCCTGGCCGC >TT06f_NS3c_ABN10896_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 ---ATGGACGACTCGATGGATTTGGACTTAGACTGCGTTATAGCACAGCCTTCGAGCACAATCGTTATGATGCCTCTAAGTCCTATTTCTACACGGAAACGTCGTCGTCATCCGATGAATAAAAGACGCTATGCTAAGCGCCGTTTTACTCCTGTTGAGCCAAACGATATAATAATGTGTGAAAAACCCACACATTGTATTCGCTTGGTTTTCGACCAATCATTACGCTGGGTGCATTTTGATGGTATCAAAAACATCCTCAGTGATTATGATGTTATCTTTAACCCTGATTTACACGTTACTGTAGCATTAGTTTGCGCAGGTAACGGTGTTACATTCAGTGATCTCACACCACTAACATTCATTCTAGCTGACATGCTGCTTGAATTTAATGGCATCTTTACTTTGGGACAGACTTTGGTCATTGGTGCACGAGAGTACCATTGGCTACCACAAGAGCTCAAAACTAATGTGGGCAAAGCGATCCCTCAGGCTAAAGAATGGCTTGTAGACCATGGCTACAATGTGTACCATACAGGCCTTCCTACTCATATGTCGCTTGCAAAGCTGCATTCATTAGACTTCGTCCAACAATCATATGTTGGCAGTAAGTTCTTTATTAAACATTCTCACACCACCGAATACGCTATGCCTGTTTGCTTACAGGTAATAGCTATTGATGGTGAGAAAGTTGATGGTCGATCGAAACCTCTGTTTCAGTATCCCATCCATAATCACTACAGACACTATCGTGCCTGCTTTCCTGGCCGC >TT07f_NS3c_ABN10905_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 ---ATGGACGACTCGATGGATTTGGACTTAGACTGCGTTATAGCACAGCCTTCGAGCACAATCGTTATGATGCCTCTAAGTCCTATTTCTACACGGAAACGTCGTCGTCATCCGATGAATAAAAGACGCTATGCTAAGCGCCGTTTTACTCCTGTTGAGCCAAACGATATAATAATGTGTGAAAAACCCACACATTGTATTCGCTTGGTTTTCGACCAATCATTACGCTGGGTGCATTTTGATGGTATCAAAAACATCCTCAGTGATTATGATGTTATCTTTAACCCTGATTTACACGTTACTGTAGCATTAGTTTGCGCAGGTAACGGTGTTACATTCAGTGATCTCACACCACTAACATTCATTCTAGCTGACATGCTGCTTGAATTTAATGGCATCTTTACTTTGGGACAGACTTTGGTCATTGGTGCACGAGAGTACCATTGGCTACCACAAGAGCTCAAAACTAATGTGGGCAAAGCGATCCCTCAGGCTAAAGAATGGCTTGTAGACCATGGCTACAATGTGTACCATACAGGCCTTCCTACTCATATGTCGCTTGCAAAGCTGCATTCATTAGACTTCGTCCAACAATCATATGTTGGCAGTAAGTTCTTTATTAAACATTCTCACACCACCGAATACGCTATGCCTGTTTGCTTACAGGTAATAGCTATTGATGGTGAGAAAGTTGATGGTCGATCGAAACCTCTGTTTCAGTATCCCATCCATAATCACTACAGACACTATCGTGCCTGCTTTCCTGGCCGC >YD13403_orf4b_AWH65935_1_2013_06_03_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 ---ATGGACGACTCGATGGATTTGGACTTAGACTGCGTTATAGCACAGCCTTCGAGCACAATCGTTATGATGCCTCTAAGTCCTATTTCTACACGGAAACGTCGTCGTCATCCGATGAATAAAAGACGCTATGCCAAGCGCCGTTTTACTCCTGTTGAGCCAAACGATATCATAATGTGTGAAAAACCCACACATTGCATTCGCTTGGTTTTTGACCAATCATTACGCTGGGTGCATTTTGATGGTATCAAAAACATCCTCAGTGATTATGATGTTATCTTTAACCCTGATTTACACGTTACTATTGCTCTAGTTTGCGCAGGTAACGGTGTTACATTCAGTGATCTCACACCACTAACATTCATCCTAGCTGAAATGCTGCTTGAATTTAATGGTAACTTTACTTTGGGACAGACTTTGGTCATTGGTGCACGAGAGTACCATTGGCTACCACAAGAGCTAAAAACTAATGTGGGCAAAGCTATCCCTCAGGCTAAAGAATGGCTTGTACATCATGGTTACAACGTGTACCATACAGGCCTTCCAACTCATATGTCGCTTGCAAAGCTGCATTCATTAGACTTCGTCCAACAATCATACGTTGGCAGTAAGTTCTTTATTAAACATTCTCACACCACTGAATATGCTATGCCTGTTTGTTTACAGGTAATAGCTATTGATGGTGAGAAAGTTGATGGTCGATCAAAACCTCTGTTTCAGTATCCCATTCACAATCATTACAGACACTATCGTGCCTGCTTTCCTGGCCGC
>BY140535_orf4b_AWH65913_1_2014_06_26_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 MTDDSMDLSLDCVIAQPSSEIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVVPSDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWLPQELKTNVGKAIPQSKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHYRACFPGR >BtPa_GD2013_NA_AIA62346_1_2013_China_Bat_Pipistrellus_bat_coronavirus_HKU5 MTDDSMDLNLDCVIAQPSSEIVMMPLSPISTRKRRRHPKNKTRYAKRRFSPLEPRDIIMCEKPTHCIRLVFDQSLRWLHFDGVKNILADYGVTFSSDLHVTVALVCAGNGVTFSDLTPLTFLLADMLLEFNGISTLGQTLVIGVREYPWLPKDLKSNVGQAIPQSKEWLVEHGYNVYHTGLPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHYRACFPGR >BY140562_orf4b_AWH65924_1_2014_06_28_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 MTDDSMDLSLDCVIAQPSSEIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFNLGQTLVIGAREYCWLPQELKANVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDSVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHYRACFPGR >HKU5_1_LMH03f_NS3c_YP_001039965_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMCDKPTHCIRLVFDQSLRWVHFDGIKNILTDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWLPQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHYRACFPGR >LMH03f_NS3c_ABN10878_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMCDKPTHCIRLVFDQSLRWVHFDGIKNILTDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWLPQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHYRACFPGR >TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWLPQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHYRACFPGR >TT06f_NS3c_ABN10896_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWLPQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHYRACFPGR >TT07f_NS3c_ABN10905_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHVTVALVCAGNGVTFSDLTPLTFILADMLLEFNGIFTLGQTLVIGAREYHWLPQELKTNVGKAIPQAKEWLVDHGYNVYHTGLPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHYRACFPGR >YD13403_orf4b_AWH65935_1_2013_06_03_China_Unknown_Pipistrellus_bat_coronavirus_HKU5 -MDDSMDLDLDCVIAQPSSTIVMMPLSPISTRKRRRHPMNKRRYAKRRFTPVEPNDIIMCEKPTHCIRLVFDQSLRWVHFDGIKNILSDYDVIFNPDLHVTIALVCAGNGVTFSDLTPLTFILAEMLLEFNGNFTLGQTLVIGAREYHWLPQELKTNVGKAIPQAKEWLVHHGYNVYHTGLPTHMSLAKLHSLDFVQQSYVGSKFFIKHSHTTEYAMPVCLQVIAIDGEKVDGRSKPLFQYPIHNHYRHYRACFPGR
Reading sequence file /data//pss_subsets/TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5.result/original_alignment/codeml/fasta/TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5.result.1
Found 9 sequences of length 771
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 5.7%
Found 51 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 5
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 84 polymorphic sites
**p-Value(s)**
----------
NSS: 7.55e-01 (1000 permutations)
Max Chi^2: 8.00e-03 (1000 permutations)
PHI (Permutation): 3.50e-02 (1000 permutations)
PHI (Normal): 2.24e-02
#NEXUS
[ID: 4421932486]
begin taxa;
dimensions ntax=9;
taxlabels
BY140535_orf4b_AWH65913_1_2014_06_26_China_Unknown_Pipistrellus_bat_coronavirus_HKU5
BtPa_GD2013_NA_AIA62346_1_2013_China_Bat_Pipistrellus_bat_coronavirus_HKU5
BY140562_orf4b_AWH65924_1_2014_06_28_China_Unknown_Pipistrellus_bat_coronavirus_HKU5
HKU5_1_LMH03f_NS3c_YP_001039965_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5
LMH03f_NS3c_ABN10878_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5
TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5
TT06f_NS3c_ABN10896_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5
TT07f_NS3c_ABN10905_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5
YD13403_orf4b_AWH65935_1_2013_06_03_China_Unknown_Pipistrellus_bat_coronavirus_HKU5
;
end;
begin trees;
translate
1 BY140535_orf4b_AWH65913_1_2014_06_26_China_Unknown_Pipistrellus_bat_coronavirus_HKU5,
2 BtPa_GD2013_NA_AIA62346_1_2013_China_Bat_Pipistrellus_bat_coronavirus_HKU5,
3 BY140562_orf4b_AWH65924_1_2014_06_28_China_Unknown_Pipistrellus_bat_coronavirus_HKU5,
4 HKU5_1_LMH03f_NS3c_YP_001039965_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5,
5 LMH03f_NS3c_ABN10878_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5,
6 TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5,
7 TT06f_NS3c_ABN10896_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5,
8 TT07f_NS3c_ABN10905_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5,
9 YD13403_orf4b_AWH65935_1_2013_06_03_China_Unknown_Pipistrellus_bat_coronavirus_HKU5
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:1.687919e-02,2:2.464334e-01,3:3.295205e-02,((4:1.108309e-03,5:1.036809e-03)1.000:4.017751e-02,((6:1.089924e-03,7:1.109158e-03,8:1.127136e-03)1.000:2.119287e-02,9:3.056043e-02)0.631:7.114310e-03)0.989:2.385418e-02);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:1.687919e-02,2:2.464334e-01,3:3.295205e-02,((4:1.108309e-03,5:1.036809e-03):4.017751e-02,((6:1.089924e-03,7:1.109158e-03,8:1.127136e-03):2.119287e-02,9:3.056043e-02):7.114310e-03):2.385418e-02);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1865.80 -1879.55
2 -1865.96 -1879.94
--------------------------------------
TOTAL -1865.88 -1879.76
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.451659 0.005179 0.323877 0.597337 0.445167 1230.19 1275.51 1.000
r(A<->C){all} 0.069541 0.000812 0.020476 0.126434 0.066554 671.91 780.18 1.002
r(A<->G){all} 0.187722 0.001733 0.107723 0.268560 0.184180 760.38 801.50 1.000
r(A<->T){all} 0.117332 0.000831 0.067041 0.178537 0.115295 780.34 796.02 1.000
r(C<->G){all} 0.083463 0.000925 0.028729 0.142312 0.080474 811.69 819.43 1.000
r(C<->T){all} 0.510754 0.003250 0.390813 0.616064 0.510946 723.80 740.97 1.000
r(G<->T){all} 0.031189 0.000316 0.001092 0.065092 0.028921 914.98 929.28 1.000
pi(A){all} 0.267854 0.000231 0.237550 0.297582 0.267691 1091.38 1201.93 1.001
pi(C){all} 0.227746 0.000197 0.200981 0.256092 0.227221 1085.74 1293.37 1.001
pi(G){all} 0.194010 0.000183 0.168189 0.220006 0.193778 1310.99 1355.43 1.000
pi(T){all} 0.310390 0.000249 0.281256 0.343061 0.310388 1177.66 1211.45 1.000
alpha{1,2} 0.167802 0.005098 0.024165 0.303018 0.161687 977.08 1044.71 1.005
alpha{3} 2.116727 1.265798 0.479979 4.366005 1.874239 1005.88 1093.26 1.001
pinvar{all} 0.503875 0.007331 0.332414 0.659123 0.516264 873.67 876.92 1.002
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/TT03f_NS3c_ABN10887_1_NA_China_Bat_Pipistrellus_bat_coronavirus_HKU5.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 9 ls = 256
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 8 8 6 9 9 8 | Ser TCT 5 5 3 2 2 2 | Tyr TAT 5 6 5 5 5 5 | Cys TGT 2 3 2 4 4 2
TTC 5 4 6 4 4 5 | TCC 1 5 1 0 0 0 | TAC 5 4 5 5 5 5 | TGC 4 3 5 2 2 4
Leu TTA 6 8 6 5 5 6 | TCA 1 1 3 3 3 3 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 5 6 3 4 4 4 | TCG 3 3 3 4 4 4 | TAG 0 0 0 0 0 0 | Trp TGG 3 3 3 3 3 3
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 4 7 5 7 7 4 | Pro CCT 9 10 8 8 8 10 | His CAT 10 8 10 12 12 10 | Arg CGT 6 4 6 6 6 5
CTC 3 0 3 2 2 3 | CCC 3 1 3 5 5 2 | CAC 4 5 3 2 2 4 | CGC 6 7 5 6 6 5
CTA 4 5 4 4 4 4 | CCA 3 4 5 3 3 3 | Gln CAA 4 2 3 4 4 4 | CGA 1 2 1 1 1 2
CTG 2 1 3 2 2 3 | CCG 1 1 0 0 0 1 | CAG 5 7 6 5 5 5 | CGG 0 0 1 0 0 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 6 8 7 8 8 6 | Thr ACT 6 3 5 8 8 6 | Asn AAT 4 5 7 5 5 5 | Ser AGT 3 3 3 3 3 4
ATC 8 3 7 6 6 7 | ACC 2 3 1 1 1 2 | AAC 4 3 3 4 4 4 | AGC 4 2 3 1 1 1
ATA 3 3 3 3 3 4 | ACA 6 7 6 7 7 7 | Lys AAA 10 10 10 9 9 10 | Arg AGA 2 2 2 2 2 2
Met ATG 8 7 8 9 9 9 | ACG 1 2 1 0 0 0 | AAG 3 4 3 4 4 3 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 12 9 10 11 11 11 | Ala GCT 6 5 8 8 8 5 | Asp GAT 10 8 9 12 12 9 | Gly GGT 8 8 7 7 7 6
GTC 2 4 2 2 2 2 | GCC 1 1 1 1 1 1 | GAC 6 7 7 6 6 8 | GGC 4 5 5 5 5 6
GTA 2 3 4 3 3 3 | GCA 4 5 4 3 3 5 | Glu GAA 5 7 5 3 3 4 | GGA 1 1 1 1 1 1
GTG 4 3 3 3 3 3 | GCG 0 0 0 0 0 1 | GAG 3 2 4 4 4 4 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------
Phe TTT 8 8 9 | Ser TCT 2 2 2 | Tyr TAT 5 5 5 | Cys TGT 2 2 2
TTC 5 5 4 | TCC 0 0 0 | TAC 5 5 5 | TGC 4 4 4
Leu TTA 6 6 5 | TCA 3 3 4 | *** TAA 0 0 0 | *** TGA 0 0 0
TTG 4 4 4 | TCG 4 4 3 | TAG 0 0 0 | Trp TGG 3 3 3
--------------------------------------------------------------------------------------
Leu CTT 4 4 4 | Pro CCT 10 10 9 | His CAT 10 10 11 | Arg CGT 5 5 5
CTC 3 3 2 | CCC 2 2 2 | CAC 4 4 4 | CGC 5 5 5
CTA 4 4 6 | CCA 3 3 4 | Gln CAA 4 4 4 | CGA 2 2 2
CTG 3 3 3 | CCG 1 1 1 | CAG 5 5 5 | CGG 1 1 1
--------------------------------------------------------------------------------------
Ile ATT 6 6 7 | Thr ACT 6 6 7 | Asn AAT 5 5 4 | Ser AGT 4 4 4
ATC 7 7 7 | ACC 2 2 1 | AAC 4 4 6 | AGC 1 1 1
ATA 4 4 3 | ACA 7 7 7 | Lys AAA 10 10 10 | Arg AGA 2 2 2
Met ATG 9 9 9 | ACG 0 0 0 | AAG 3 3 3 | AGG 0 0 0
--------------------------------------------------------------------------------------
Val GTT 11 11 11 | Ala GCT 5 5 6 | Asp GAT 9 9 9 | Gly GGT 6 6 8
GTC 2 2 2 | GCC 1 1 2 | GAC 8 8 6 | GGC 6 6 4
GTA 3 3 2 | GCA 5 5 4 | Glu GAA 4 4 5 | GGA 1 1 1
GTG 3 3 3 | GCG 1 1 0 | GAG 4 4 4 | GGG 0 0 0
--------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C1
position 1: T:0.20703 C:0.25391 A:0.27344 G:0.26562
position 2: T:0.32031 C:0.20312 A:0.30469 G:0.17188
position 3: T:0.40625 C:0.24219 A:0.20312 G:0.14844
Average T:0.31120 C:0.23307 A:0.26042 G:0.19531
#2: C2
position 1: T:0.23047 C:0.25000 A:0.25391 G:0.26562
position 2: T:0.30859 C:0.21875 A:0.30469 G:0.16797
position 3: T:0.39062 C:0.22266 A:0.23438 G:0.15234
Average T:0.30990 C:0.23047 A:0.26432 G:0.19531
#3: C3
position 1: T:0.19922 C:0.25781 A:0.26953 G:0.27344
position 2: T:0.31250 C:0.20312 A:0.31250 G:0.17188
position 3: T:0.39453 C:0.23438 A:0.22266 G:0.14844
Average T:0.30208 C:0.23177 A:0.26823 G:0.19792
#4: C4
position 1: T:0.19531 C:0.26172 A:0.27344 G:0.26953
position 2: T:0.32031 C:0.20703 A:0.31250 G:0.16016
position 3: T:0.44922 C:0.20312 A:0.19922 G:0.14844
Average T:0.32161 C:0.22396 A:0.26172 G:0.19271
#5: C5
position 1: T:0.19531 C:0.26172 A:0.27344 G:0.26953
position 2: T:0.32031 C:0.20703 A:0.31250 G:0.16016
position 3: T:0.44922 C:0.20312 A:0.19922 G:0.14844
Average T:0.32161 C:0.22396 A:0.26172 G:0.19271
#6: C6
position 1: T:0.19922 C:0.25781 A:0.27344 G:0.26953
position 2: T:0.32031 C:0.20312 A:0.31250 G:0.16406
position 3: T:0.38281 C:0.23047 A:0.22656 G:0.16016
Average T:0.30078 C:0.23047 A:0.27083 G:0.19792
#7: C7
position 1: T:0.19922 C:0.25781 A:0.27344 G:0.26953
position 2: T:0.32031 C:0.20312 A:0.31250 G:0.16406
position 3: T:0.38281 C:0.23047 A:0.22656 G:0.16016
Average T:0.30078 C:0.23047 A:0.27083 G:0.19792
#8: C8
position 1: T:0.19922 C:0.25781 A:0.27344 G:0.26953
position 2: T:0.32031 C:0.20312 A:0.31250 G:0.16406
position 3: T:0.38281 C:0.23047 A:0.22656 G:0.16016
Average T:0.30078 C:0.23047 A:0.27083 G:0.19792
#9: C9
position 1: T:0.19531 C:0.26562 A:0.27734 G:0.26172
position 2: T:0.31641 C:0.20312 A:0.31641 G:0.16406
position 3: T:0.40234 C:0.21484 A:0.23047 G:0.15234
Average T:0.30469 C:0.22786 A:0.27474 G:0.19271
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 73 | Ser S TCT 25 | Tyr Y TAT 46 | Cys C TGT 23
TTC 42 | TCC 7 | TAC 44 | TGC 32
Leu L TTA 53 | TCA 24 | *** * TAA 0 | *** * TGA 0
TTG 38 | TCG 32 | TAG 0 | Trp W TGG 27
------------------------------------------------------------------------------
Leu L CTT 46 | Pro P CCT 82 | His H CAT 93 | Arg R CGT 48
CTC 21 | CCC 25 | CAC 32 | CGC 50
CTA 39 | CCA 31 | Gln Q CAA 33 | CGA 14
CTG 22 | CCG 6 | CAG 48 | CGG 5
------------------------------------------------------------------------------
Ile I ATT 62 | Thr T ACT 55 | Asn N AAT 45 | Ser S AGT 31
ATC 58 | ACC 15 | AAC 36 | AGC 15
ATA 30 | ACA 61 | Lys K AAA 88 | Arg R AGA 18
Met M ATG 77 | ACG 4 | AAG 30 | AGG 0
------------------------------------------------------------------------------
Val V GTT 97 | Ala A GCT 56 | Asp D GAT 87 | Gly G GGT 63
GTC 20 | GCC 10 | GAC 62 | GGC 46
GTA 26 | GCA 38 | Glu E GAA 40 | GGA 9
GTG 28 | GCG 3 | GAG 33 | GGG 0
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.20226 C:0.25825 A:0.27127 G:0.26823
position 2: T:0.31771 C:0.20573 A:0.31120 G:0.16536
position 3: T:0.40451 C:0.22352 A:0.21875 G:0.15321
Average T:0.30816 C:0.22917 A:0.26707 G:0.19560
Model 1: NearlyNeutral (2 categories)
TREE # 1: (1, 2, 3, ((4, 5), ((6, 7, 8), 9))); MP score: 155
lnL(ntime: 13 np: 16): -1791.644989 +0.000000
10..1 10..2 10..3 10..11 11..12 12..4 12..5 11..13 13..14 14..6 14..7 14..8 13..9
0.046342 0.430442 0.080991 0.053763 0.089797 0.000004 0.000004 0.013721 0.047667 0.000004 0.000004 0.000004 0.068783 2.013891 0.928520 0.038870
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.831526
(1: 0.046342, 2: 0.430442, 3: 0.080991, ((4: 0.000004, 5: 0.000004): 0.089797, ((6: 0.000004, 7: 0.000004, 8: 0.000004): 0.047667, 9: 0.068783): 0.013721): 0.053763);
(C1: 0.046342, C2: 0.430442, C3: 0.080991, ((C4: 0.000004, C5: 0.000004): 0.089797, ((C6: 0.000004, C7: 0.000004, C8: 0.000004): 0.047667, C9: 0.068783): 0.013721): 0.053763);
Detailed output identifying parameters
kappa (ts/tv) = 2.01389
MLEs of dN/dS (w) for site classes (K=2)
p: 0.92852 0.07148
w: 0.03887 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
10..1 0.046 582.0 186.0 0.1076 0.0051 0.0477 3.0 8.9
10..2 0.430 582.0 186.0 0.1076 0.0477 0.4432 27.7 82.4
10..3 0.081 582.0 186.0 0.1076 0.0090 0.0834 5.2 15.5
10..11 0.054 582.0 186.0 0.1076 0.0060 0.0554 3.5 10.3
11..12 0.090 582.0 186.0 0.1076 0.0099 0.0925 5.8 17.2
12..4 0.000 582.0 186.0 0.1076 0.0000 0.0000 0.0 0.0
12..5 0.000 582.0 186.0 0.1076 0.0000 0.0000 0.0 0.0
11..13 0.014 582.0 186.0 0.1076 0.0015 0.0141 0.9 2.6
13..14 0.048 582.0 186.0 0.1076 0.0053 0.0491 3.1 9.1
14..6 0.000 582.0 186.0 0.1076 0.0000 0.0000 0.0 0.0
14..7 0.000 582.0 186.0 0.1076 0.0000 0.0000 0.0 0.0
14..8 0.000 582.0 186.0 0.1076 0.0000 0.0000 0.0 0.0
13..9 0.069 582.0 186.0 0.1076 0.0076 0.0708 4.4 13.2
Time used: 0:09
Model 2: PositiveSelection (3 categories)
TREE # 1: (1, 2, 3, ((4, 5), ((6, 7, 8), 9))); MP score: 155
lnL(ntime: 13 np: 18): -1791.644989 +0.000000
10..1 10..2 10..3 10..11 11..12 12..4 12..5 11..13 13..14 14..6 14..7 14..8 13..9
0.046342 0.430442 0.080991 0.053763 0.089797 0.000004 0.000004 0.013721 0.047667 0.000004 0.000004 0.000004 0.068783 2.013890 0.928520 0.002746 0.038870 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.831526
(1: 0.046342, 2: 0.430442, 3: 0.080991, ((4: 0.000004, 5: 0.000004): 0.089797, ((6: 0.000004, 7: 0.000004, 8: 0.000004): 0.047667, 9: 0.068783): 0.013721): 0.053763);
(C1: 0.046342, C2: 0.430442, C3: 0.080991, ((C4: 0.000004, C5: 0.000004): 0.089797, ((C6: 0.000004, C7: 0.000004, C8: 0.000004): 0.047667, C9: 0.068783): 0.013721): 0.053763);
Detailed output identifying parameters
kappa (ts/tv) = 2.01389
MLEs of dN/dS (w) for site classes (K=3)
p: 0.92852 0.00275 0.06873
w: 0.03887 1.00000 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
10..1 0.046 582.0 186.0 0.1076 0.0051 0.0477 3.0 8.9
10..2 0.430 582.0 186.0 0.1076 0.0477 0.4432 27.7 82.4
10..3 0.081 582.0 186.0 0.1076 0.0090 0.0834 5.2 15.5
10..11 0.054 582.0 186.0 0.1076 0.0060 0.0554 3.5 10.3
11..12 0.090 582.0 186.0 0.1076 0.0099 0.0925 5.8 17.2
12..4 0.000 582.0 186.0 0.1076 0.0000 0.0000 0.0 0.0
12..5 0.000 582.0 186.0 0.1076 0.0000 0.0000 0.0 0.0
11..13 0.014 582.0 186.0 0.1076 0.0015 0.0141 0.9 2.6
13..14 0.048 582.0 186.0 0.1076 0.0053 0.0491 3.1 9.1
14..6 0.000 582.0 186.0 0.1076 0.0000 0.0000 0.0 0.0
14..7 0.000 582.0 186.0 0.1076 0.0000 0.0000 0.0 0.0
14..8 0.000 582.0 186.0 0.1076 0.0000 0.0000 0.0 0.0
13..9 0.069 582.0 186.0 0.1076 0.0076 0.0708 4.4 13.2
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
8 S 0.619 1.409 +- 0.501
54 S 0.630 1.418 +- 0.498
87 S 0.558 1.345 +- 0.443
147 H 0.664 1.451 +- 0.524
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.861 0.117 0.016 0.003 0.001 0.001 0.000 0.000 0.000 0.000
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.006 0.994
sum of density on p0-p1 = 1.000000
Time used: 0:35
Model 7: beta (10 categories)
TREE # 1: (1, 2, 3, ((4, 5), ((6, 7, 8), 9))); MP score: 155
lnL(ntime: 13 np: 16): -1791.776080 +0.000000
10..1 10..2 10..3 10..11 11..12 12..4 12..5 11..13 13..14 14..6 14..7 14..8 13..9
0.046368 0.428290 0.081246 0.053987 0.090002 0.000004 0.000004 0.013683 0.047863 0.000004 0.000004 0.000004 0.069119 1.983085 0.102137 0.865082
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.830578
(1: 0.046368, 2: 0.428290, 3: 0.081246, ((4: 0.000004, 5: 0.000004): 0.090002, ((6: 0.000004, 7: 0.000004, 8: 0.000004): 0.047863, 9: 0.069119): 0.013683): 0.053987);
(C1: 0.046368, C2: 0.428290, C3: 0.081246, ((C4: 0.000004, C5: 0.000004): 0.090002, ((C6: 0.000004, C7: 0.000004, C8: 0.000004): 0.047863, C9: 0.069119): 0.013683): 0.053987);
Detailed output identifying parameters
kappa (ts/tv) = 1.98309
Parameters in M7 (beta):
p = 0.10214 q = 0.86508
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00000 0.00004 0.00051 0.00361 0.01847 0.07446 0.24771 0.68158
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
10..1 0.046 582.5 185.5 0.1026 0.0050 0.0484 2.9 9.0
10..2 0.428 582.5 185.5 0.1026 0.0459 0.4469 26.7 82.9
10..3 0.081 582.5 185.5 0.1026 0.0087 0.0848 5.1 15.7
10..11 0.054 582.5 185.5 0.1026 0.0058 0.0563 3.4 10.5
11..12 0.090 582.5 185.5 0.1026 0.0096 0.0939 5.6 17.4
12..4 0.000 582.5 185.5 0.1026 0.0000 0.0000 0.0 0.0
12..5 0.000 582.5 185.5 0.1026 0.0000 0.0000 0.0 0.0
11..13 0.014 582.5 185.5 0.1026 0.0015 0.0143 0.9 2.6
13..14 0.048 582.5 185.5 0.1026 0.0051 0.0499 3.0 9.3
14..6 0.000 582.5 185.5 0.1026 0.0000 0.0000 0.0 0.0
14..7 0.000 582.5 185.5 0.1026 0.0000 0.0000 0.0 0.0
14..8 0.000 582.5 185.5 0.1026 0.0000 0.0000 0.0 0.0
13..9 0.069 582.5 185.5 0.1026 0.0074 0.0721 4.3 13.4
Time used: 1:26
Model 8: beta&w>1 (11 categories)
TREE # 1: (1, 2, 3, ((4, 5), ((6, 7, 8), 9))); MP score: 155
lnL(ntime: 13 np: 18): -1791.608083 +0.000000
10..1 10..2 10..3 10..11 11..12 12..4 12..5 11..13 13..14 14..6 14..7 14..8 13..9
0.046355 0.430055 0.081133 0.053856 0.089901 0.000004 0.000004 0.013716 0.047709 0.000004 0.000004 0.000004 0.068855 2.002611 0.937097 0.465763 9.248019 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.831598
(1: 0.046355, 2: 0.430055, 3: 0.081133, ((4: 0.000004, 5: 0.000004): 0.089901, ((6: 0.000004, 7: 0.000004, 8: 0.000004): 0.047709, 9: 0.068855): 0.013716): 0.053856);
(C1: 0.046355, C2: 0.430055, C3: 0.081133, ((C4: 0.000004, C5: 0.000004): 0.089901, ((C6: 0.000004, C7: 0.000004, C8: 0.000004): 0.047709, C9: 0.068855): 0.013716): 0.053856);
Detailed output identifying parameters
kappa (ts/tv) = 2.00261
Parameters in M8 (beta&w>1):
p0 = 0.93710 p = 0.46576 q = 9.24802
(p1 = 0.06290) w = 1.00000
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09371 0.09371 0.09371 0.09371 0.09371 0.09371 0.09371 0.09371 0.09371 0.09371 0.06290
w: 0.00014 0.00147 0.00448 0.00949 0.01696 0.02766 0.04292 0.06548 0.10232 0.18463 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
10..1 0.046 582.1 185.9 0.1056 0.0051 0.0480 2.9 8.9
10..2 0.430 582.1 185.9 0.1056 0.0470 0.4451 27.4 82.7
10..3 0.081 582.1 185.9 0.1056 0.0089 0.0840 5.2 15.6
10..11 0.054 582.1 185.9 0.1056 0.0059 0.0557 3.4 10.4
11..12 0.090 582.1 185.9 0.1056 0.0098 0.0931 5.7 17.3
12..4 0.000 582.1 185.9 0.1056 0.0000 0.0000 0.0 0.0
12..5 0.000 582.1 185.9 0.1056 0.0000 0.0000 0.0 0.0
11..13 0.014 582.1 185.9 0.1056 0.0015 0.0142 0.9 2.6
13..14 0.048 582.1 185.9 0.1056 0.0052 0.0494 3.0 9.2
14..6 0.000 582.1 185.9 0.1056 0.0000 0.0000 0.0 0.0
14..7 0.000 582.1 185.9 0.1056 0.0000 0.0000 0.0 0.0
14..8 0.000 582.1 185.9 0.1056 0.0000 0.0000 0.0 0.0
13..9 0.069 582.1 185.9 0.1056 0.0075 0.0713 4.4 13.2
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
8 S 0.790 1.380 +- 0.516
54 S 0.805 1.397 +- 0.505
87 S 0.725 1.301 +- 0.533
94 N 0.564 1.079 +- 0.633
147 H 0.847 1.444 +- 0.478
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.000 0.004 0.024 0.076 0.166 0.290 0.440
ws: 0.917 0.075 0.006 0.001 0.000 0.000 0.000 0.000 0.000 0.000
Time used: 3:10
Model 1: NearlyNeutral -1791.644989 Model 2: PositiveSelection -1791.644989 Model 7: beta -1791.776080 Model 8: beta&w>1 -1791.608083 Model 2 vs 1 0 Model 8 vs 7 .335994
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
