--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2049.49 -2086.80
2 -2048.52 -2080.56
--------------------------------------
TOTAL -2048.89 -2086.11
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.340899 0.001680 0.263418 0.419926 0.338056 1213.54 1264.09 1.000
r(A<->C){all} 0.070377 0.000570 0.031788 0.120544 0.068119 815.12 817.16 1.000
r(A<->G){all} 0.244296 0.001515 0.167895 0.319547 0.242887 530.56 661.30 1.000
r(A<->T){all} 0.069568 0.000500 0.028521 0.113691 0.067146 766.32 881.72 1.001
r(C<->G){all} 0.057384 0.000358 0.022706 0.093881 0.055287 878.15 884.54 1.000
r(C<->T){all} 0.484219 0.002443 0.384626 0.576746 0.484624 533.35 650.59 1.000
r(G<->T){all} 0.074156 0.000376 0.038580 0.111961 0.072689 677.78 795.35 1.000
pi(A){all} 0.215603 0.000208 0.187779 0.242889 0.215499 1049.36 1113.12 1.000
pi(C){all} 0.226057 0.000217 0.198875 0.254557 0.225921 1004.69 1109.10 1.000
pi(G){all} 0.285688 0.000253 0.254679 0.316512 0.285397 1280.42 1326.84 1.000
pi(T){all} 0.272652 0.000250 0.241171 0.301913 0.272431 1040.22 1053.98 1.000
alpha{1,2} 0.291003 0.023639 0.005594 0.558584 0.261674 962.93 963.84 1.000
alpha{3} 1.859873 1.130159 0.335977 3.985038 1.615574 1092.39 1180.60 1.000
pinvar{all} 0.468112 0.012011 0.254044 0.675947 0.486371 630.22 639.97 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -1960.622938
Model 2: PositiveSelection -1958.152340
Model 7: beta -1961.930879
Model 8: beta&w>1 -1957.821633
Model 2 vs 1 4.941196
Model 8 vs 7 8.218492
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
46 V 0.991** 2.639
49 R 0.823 2.258
123 P 0.982* 2.619
131 V 0.977* 2.608
228 G 0.869 2.366
232 R 0.977* 2.609
236 T 0.948 2.543
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
46 V 0.960* 2.680 +- 0.857
49 R 0.783 2.294 +- 1.111
123 P 0.947 2.659 +- 0.885
131 V 0.937 2.636 +- 0.901
228 G 0.794 2.307 +- 1.061
232 R 0.936 2.634 +- 0.900
236 T 0.880 2.506 +- 0.971
-- Starting log on Wed Nov 02 20:11:36 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.07 sec, SCORE=1000, Nseq=27, Len=247
C1 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C2 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C3 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C4 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C5 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKAK
C6 MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK
C7 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C8 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C9 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C10 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C11 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C12 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C13 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C14 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKAK
C15 ---MGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK
C16 MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK
C17 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C18 MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK
C19 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C20 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C21 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C22 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C23 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C24 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C25 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C26 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C27 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
**************************.******************.*
C1 GRTLVNHVRVDCSRLPALECCVQSAIIRDIFVDKDPQKVEASTMMALQFG
C2 GRTLVNHVRVDYSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C3 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C4 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C5 GTSLANHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C6 GKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFG
C7 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C8 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C9 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C10 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C11 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C12 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C13 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C14 GTSLANHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVESSTMMALQFG
C15 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C16 GKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFG
C17 GRTLVNHVRVDCSRLPALECCVQSAIIRDIFVDKDPQKVEASTMMALQFG
C18 GKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFG
C19 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C20 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C21 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C22 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C23 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C24 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C25 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C26 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C27 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
* :* *****: *********************:** :**:*********
C1 SAVLIMPSKRLSIQAWANLGVLPRTPAMGLFKRVCLCNTRGCSCDVHVAF
C2 SAVLIMPSKRLSIQAWANLGVLPRTPAMGLFKRVCLCNTRGCSCDVHVAF
C3 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C4 SAVLVKPSKRLSIQAWANLGVLPKTAAMGLFKRLCLCNTRECVCDAHVAF
C5 SAVLVKPSKRLSIQAWANLGVLPKTPAMGLFKRYCLCNTRECSCDAHVAF
C6 SAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C7 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C8 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C9 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C10 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C11 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C12 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C13 SAVLVKPSKRLSIQAWAKLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C14 SAVLVKPSKRLSIQAWANLGVLPKTHAMGLFKRYCLCNTRGCSCDAHVAF
C15 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C16 SAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C17 SAVLIMPSKRLSIQAWANLGVLPRTPAMGLFKRVCLCNTRGCSCDVHVAF
C18 SAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C19 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C20 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C21 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C22 SAVLVKPSKRLSIQAWAKLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C23 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C24 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C25 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C26 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C27 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
****: ******:***::*****:* ******* ****** * **.****
C1 QLFTVQPDGVWLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C2 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C3 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C4 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C5 QLFMVQPDGVCLGNGRFIGWFVPATAVPEYAKQWLQPWSILLRKGGNKGS
C6 QLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGS
C7 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C8 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C9 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C10 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C11 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C12 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C13 QLFTVQPDGVCLGNGRLIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C14 QLFMVQPDGVCLGNGRFIGWFVPTTAIPEYAKQWLQPWSILLRKGGNKGS
C15 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C16 QLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGS
C17 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C18 QLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGS
C19 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C20 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C21 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRRGGNKGS
C22 QLFTVQPDGVCLGNGRLIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C23 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C24 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRRGGNKGS
C25 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C26 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRRGGNKGS
C27 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
:** ****** *****:******.**:* **************:******
C1 VTSGH-RRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYTLLKGYRG
C2 VTSGH-RRAVTMPVYHFNVEDACEEVHLNPKSEYSRKAYTLLKGYRG
C3 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C4 VTSGHFRRAVTMPVYDFNVEDACEEVYLNPKGKYSCKAYALLKGYRG
C5 VTSGHFRRAVTMPLYDFDVEDACEEVHLNPKGKYSRRAYTLLRGYRG
C6 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRG
C7 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C8 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C9 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C10 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C11 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C12 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C13 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPEEKYSCKAYRLLKGYRG
C14 VTFGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSSKAYALLKGYRG
C15 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C16 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRG
C17 VTSGH-RRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYTLLKGYRG
C18 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRG
C19 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C20 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C21 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C22 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C23 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C24 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C25 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C26 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C27 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
** ** *******:*.*:********:***. :** :** **:****
-- Starting log on Wed Nov 02 20:14:52 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.35 sec, SCORE=999, Nseq=27, Len=247
C1 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C2 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C3 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C4 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C5 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKAK
C6 MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK
C7 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C8 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C9 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C10 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C11 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C12 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C13 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C14 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKAK
C15 ---MGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK
C16 MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK
C17 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C18 MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK
C19 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C20 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C21 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C22 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C23 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C24 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C25 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C26 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C27 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
**************************.******************.*
C1 GRTLVNHVRVDCSRLPALECCVQSAIIRDIFVDKDPQKVEASTMMALQFG
C2 GRTLVNHVRVDYSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C3 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C4 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C5 GTSLANHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C6 GKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFG
C7 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C8 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C9 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C10 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C11 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C12 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C13 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C14 GTSLANHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVESSTMMALQFG
C15 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C16 GKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFG
C17 GRTLVNHVRVDCSRLPALECCVQSAIIRDIFVDKDPQKVEASTMMALQFG
C18 GKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFG
C19 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C20 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C21 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C22 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C23 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C24 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C25 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C26 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C27 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
* :* *****: *********************:** :**:*********
C1 SAVLIMPSKRLSIQAWANLGVLPRTPAMGLFKRVCLCNTRGCSCDVHVAF
C2 SAVLIMPSKRLSIQAWANLGVLPRTPAMGLFKRVCLCNTRGCSCDVHVAF
C3 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C4 SAVLVKPSKRLSIQAWANLGVLPKTAAMGLFKRLCLCNTRECVCDAHVAF
C5 SAVLVKPSKRLSIQAWANLGVLPKTPAMGLFKRYCLCNTRECSCDAHVAF
C6 SAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C7 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C8 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C9 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C10 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C11 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C12 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C13 SAVLVKPSKRLSIQAWAKLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C14 SAVLVKPSKRLSIQAWANLGVLPKTHAMGLFKRYCLCNTRGCSCDAHVAF
C15 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C16 SAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C17 SAVLIMPSKRLSIQAWANLGVLPRTPAMGLFKRVCLCNTRGCSCDVHVAF
C18 SAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C19 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C20 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C21 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C22 SAVLVKPSKRLSIQAWAKLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C23 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C24 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C25 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C26 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C27 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
****: ******:***::*****:* ******* ****** * **.****
C1 QLFTVQPDGVWLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C2 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C3 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C4 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C5 QLFMVQPDGVCLGNGRFIGWFVPATAVPEYAKQWLQPWSILLRKGGNKGS
C6 QLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGS
C7 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C8 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C9 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C10 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C11 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C12 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C13 QLFTVQPDGVCLGNGRLIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C14 QLFMVQPDGVCLGNGRFIGWFVPTTAIPEYAKQWLQPWSILLRKGGNKGS
C15 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C16 QLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGS
C17 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C18 QLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGS
C19 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C20 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C21 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRRGGNKGS
C22 QLFTVQPDGVCLGNGRLIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C23 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C24 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRRGGNKGS
C25 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C26 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRRGGNKGS
C27 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
:** ****** *****:******.**:* **************:******
C1 VTSGH-RRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYTLLKGYRG
C2 VTSGH-RRAVTMPVYHFNVEDACEEVHLNPKSEYSRKAYTLLKGYRG
C3 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C4 VTSGHFRRAVTMPVYDFNVEDACEEVYLNPKGKYSCKAYALLKGYRG
C5 VTSGHFRRAVTMPLYDFDVEDACEEVHLNPKGKYSRRAYTLLRGYRG
C6 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRG
C7 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C8 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C9 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C10 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C11 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C12 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C13 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPEEKYSCKAYRLLKGYRG
C14 VTFGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSSKAYALLKGYRG
C15 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C16 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRG
C17 VTSGH-RRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYTLLKGYRG
C18 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRG
C19 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C20 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C21 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C22 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C23 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C24 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C25 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C26 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C27 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
** ** *******:*.*:********:***. :** :** **:****
-- Starting log on Wed Nov 02 22:01:43 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus.result/gapped_alignment/codeml,A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 27 taxa and 741 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C11
Taxon 4 -> C12
Taxon 5 -> C13
Taxon 6 -> C14
Taxon 7 -> C15
Taxon 8 -> C16
Taxon 9 -> C17
Taxon 10 -> C18
Taxon 11 -> C19
Taxon 12 -> C2
Taxon 13 -> C20
Taxon 14 -> C21
Taxon 15 -> C22
Taxon 16 -> C23
Taxon 17 -> C24
Taxon 18 -> C25
Taxon 19 -> C26
Taxon 20 -> C27
Taxon 21 -> C3
Taxon 22 -> C4
Taxon 23 -> C5
Taxon 24 -> C6
Taxon 25 -> C7
Taxon 26 -> C8
Taxon 27 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1667426505
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1277203148
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 8354679287
Seed = 1155762260
Swapseed = 1667426505
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 31 unique site patterns
Division 2 has 31 unique site patterns
Division 3 has 67 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -3719.599009 -- 76.516819
Chain 2 -- -3730.376073 -- 76.516819
Chain 3 -- -3746.526318 -- 76.516819
Chain 4 -- -3617.510712 -- 76.516819
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -3777.232648 -- 76.516819
Chain 2 -- -3778.009257 -- 76.516819
Chain 3 -- -3723.638174 -- 76.516819
Chain 4 -- -3781.253723 -- 76.516819
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-3719.599] (-3730.376) (-3746.526) (-3617.511) * [-3777.233] (-3778.009) (-3723.638) (-3781.254)
1000 -- (-2310.260) [-2156.385] (-2181.819) (-2198.181) * [-2185.985] (-2170.419) (-2166.585) (-2187.627) -- 0:16:39
2000 -- [-2090.215] (-2083.943) (-2111.488) (-2140.625) * (-2124.776) (-2095.355) [-2120.680] (-2117.545) -- 0:16:38
3000 -- (-2071.995) [-2072.905] (-2084.951) (-2117.219) * (-2097.014) [-2084.919] (-2093.216) (-2096.572) -- 0:11:04
4000 -- (-2067.065) (-2076.822) [-2069.158] (-2092.024) * (-2089.862) (-2074.459) [-2066.114] (-2079.767) -- 0:12:27
5000 -- [-2060.808] (-2080.695) (-2077.963) (-2083.919) * (-2060.198) [-2063.454] (-2063.825) (-2063.284) -- 0:13:16
Average standard deviation of split frequencies: 0.080507
6000 -- (-2062.276) (-2076.483) (-2062.747) [-2077.537] * (-2078.375) (-2072.189) (-2075.331) [-2056.962] -- 0:13:48
7000 -- (-2074.920) (-2075.112) [-2056.127] (-2079.115) * [-2057.284] (-2064.778) (-2070.061) (-2065.684) -- 0:14:11
8000 -- (-2066.800) (-2073.271) [-2060.949] (-2078.811) * [-2058.126] (-2069.992) (-2065.778) (-2060.017) -- 0:14:28
9000 -- [-2062.427] (-2064.031) (-2080.637) (-2064.185) * (-2063.961) (-2068.567) [-2069.749] (-2068.217) -- 0:14:40
10000 -- [-2060.746] (-2068.718) (-2081.310) (-2067.712) * [-2053.746] (-2066.273) (-2083.586) (-2080.355) -- 0:13:12
Average standard deviation of split frequencies: 0.069238
11000 -- (-2068.741) (-2071.254) [-2062.549] (-2070.531) * [-2071.123] (-2073.214) (-2083.016) (-2077.348) -- 0:13:29
12000 -- (-2067.465) [-2059.792] (-2061.332) (-2062.945) * (-2073.838) (-2065.301) (-2081.741) [-2073.465] -- 0:13:43
13000 -- (-2066.415) (-2071.249) (-2078.415) [-2051.629] * [-2074.719] (-2067.768) (-2079.833) (-2069.016) -- 0:13:55
14000 -- (-2063.380) (-2070.904) (-2054.478) [-2059.755] * [-2060.205] (-2065.981) (-2062.835) (-2055.510) -- 0:14:05
15000 -- [-2058.267] (-2083.926) (-2054.009) (-2068.262) * (-2068.785) (-2088.667) [-2063.635] (-2079.191) -- 0:14:13
Average standard deviation of split frequencies: 0.058256
16000 -- (-2076.352) [-2054.402] (-2063.378) (-2068.040) * (-2063.405) (-2060.975) [-2063.557] (-2067.607) -- 0:13:19
17000 -- (-2063.358) [-2068.053] (-2067.533) (-2062.648) * (-2073.840) (-2064.848) [-2066.832] (-2069.727) -- 0:13:29
18000 -- (-2073.738) (-2064.471) (-2066.822) [-2056.705] * (-2073.644) [-2062.790] (-2064.075) (-2077.058) -- 0:13:38
19000 -- (-2082.908) (-2075.889) (-2082.046) [-2057.782] * (-2068.129) (-2066.561) [-2056.459] (-2055.720) -- 0:13:46
20000 -- (-2076.113) [-2061.901] (-2072.037) (-2079.193) * (-2063.718) (-2064.109) (-2061.937) [-2057.774] -- 0:13:53
Average standard deviation of split frequencies: 0.038262
21000 -- (-2058.940) [-2059.470] (-2076.995) (-2069.324) * (-2069.230) (-2071.117) (-2073.107) [-2060.778] -- 0:13:59
22000 -- (-2073.758) (-2074.794) (-2061.203) [-2058.787] * (-2082.803) (-2080.649) (-2071.350) [-2055.109] -- 0:14:04
23000 -- (-2068.152) (-2074.524) [-2045.625] (-2073.564) * (-2054.607) (-2080.633) [-2056.641] (-2074.798) -- 0:13:27
24000 -- (-2065.459) (-2073.733) [-2054.604] (-2082.728) * (-2059.425) (-2083.856) [-2074.896] (-2057.436) -- 0:13:33
25000 -- (-2058.477) [-2071.018] (-2079.215) (-2070.179) * (-2078.141) (-2068.823) [-2060.939] (-2049.154) -- 0:13:39
Average standard deviation of split frequencies: 0.040057
26000 -- (-2056.361) (-2059.690) [-2076.557] (-2073.093) * (-2050.189) (-2080.805) [-2057.680] (-2068.838) -- 0:13:44
27000 -- (-2081.876) (-2068.673) [-2068.127] (-2068.968) * (-2057.592) (-2080.664) [-2057.428] (-2068.907) -- 0:13:48
28000 -- (-2071.766) [-2052.054] (-2051.556) (-2060.203) * (-2083.390) (-2067.130) (-2053.179) [-2067.322] -- 0:13:53
29000 -- [-2065.988] (-2077.489) (-2054.681) (-2067.610) * (-2065.808) (-2064.392) [-2057.358] (-2062.241) -- 0:13:23
30000 -- (-2081.434) (-2074.873) [-2050.997] (-2051.792) * (-2070.338) [-2072.955] (-2075.598) (-2060.220) -- 0:13:28
Average standard deviation of split frequencies: 0.040690
31000 -- (-2068.299) (-2069.374) [-2066.940] (-2066.814) * (-2060.702) [-2061.200] (-2073.973) (-2066.231) -- 0:13:32
32000 -- (-2070.670) (-2071.419) [-2058.527] (-2059.653) * (-2067.835) [-2073.048] (-2059.345) (-2060.221) -- 0:13:36
33000 -- (-2058.630) [-2057.736] (-2062.660) (-2065.071) * (-2055.886) [-2065.519] (-2085.693) (-2070.620) -- 0:13:40
34000 -- (-2071.829) (-2077.917) (-2052.476) [-2058.627] * (-2067.456) (-2061.709) (-2072.654) [-2063.054] -- 0:13:43
35000 -- [-2061.420] (-2073.006) (-2071.071) (-2075.379) * (-2071.196) (-2057.022) (-2063.309) [-2057.058] -- 0:13:47
Average standard deviation of split frequencies: 0.040157
36000 -- (-2073.784) (-2071.449) (-2067.204) [-2056.524] * [-2066.674] (-2074.182) (-2060.636) (-2063.036) -- 0:13:23
37000 -- (-2080.473) (-2070.255) [-2059.859] (-2070.205) * (-2065.914) (-2074.452) [-2048.200] (-2073.657) -- 0:13:26
38000 -- (-2058.301) [-2055.925] (-2074.406) (-2057.126) * (-2077.865) (-2062.311) [-2060.588] (-2060.899) -- 0:13:30
39000 -- (-2070.693) (-2060.615) [-2063.327] (-2065.321) * (-2069.310) [-2060.602] (-2074.714) (-2054.621) -- 0:13:33
40000 -- (-2064.093) (-2071.443) [-2054.718] (-2078.671) * [-2055.556] (-2071.841) (-2063.306) (-2065.251) -- 0:13:36
Average standard deviation of split frequencies: 0.041018
41000 -- (-2089.798) (-2078.710) (-2060.324) [-2071.699] * [-2047.715] (-2075.980) (-2069.298) (-2079.095) -- 0:13:38
42000 -- (-2065.502) (-2079.507) (-2084.391) [-2059.926] * (-2054.520) (-2076.275) [-2057.151] (-2079.037) -- 0:13:41
43000 -- (-2058.865) (-2068.793) [-2065.038] (-2061.110) * (-2085.473) (-2059.991) (-2056.976) [-2060.074] -- 0:13:43
44000 -- (-2062.877) (-2073.908) (-2060.763) [-2062.253] * (-2059.431) [-2058.270] (-2072.404) (-2057.088) -- 0:13:45
45000 -- (-2075.561) (-2069.695) [-2074.503] (-2057.247) * [-2056.910] (-2053.598) (-2074.831) (-2062.956) -- 0:13:26
Average standard deviation of split frequencies: 0.038016
46000 -- (-2076.035) (-2070.543) (-2076.992) [-2060.628] * (-2066.610) (-2058.741) (-2074.850) [-2062.944] -- 0:13:28
47000 -- [-2057.563] (-2065.217) (-2067.327) (-2065.212) * [-2065.944] (-2065.676) (-2071.377) (-2065.788) -- 0:13:31
48000 -- (-2058.965) (-2058.206) [-2061.189] (-2062.756) * [-2061.966] (-2074.023) (-2060.191) (-2061.698) -- 0:13:33
49000 -- (-2078.164) (-2073.944) (-2066.987) [-2055.427] * (-2066.464) (-2058.229) [-2051.029] (-2081.388) -- 0:13:35
50000 -- (-2078.872) (-2065.802) (-2070.526) [-2059.684] * (-2069.466) (-2062.396) [-2058.500] (-2060.541) -- 0:13:37
Average standard deviation of split frequencies: 0.031848
51000 -- (-2085.637) [-2062.932] (-2070.698) (-2061.195) * (-2060.285) (-2062.390) [-2066.021] (-2061.533) -- 0:13:20
52000 -- (-2069.090) (-2071.420) (-2064.491) [-2060.162] * (-2064.365) (-2082.412) [-2066.744] (-2064.525) -- 0:13:22
53000 -- (-2076.583) (-2078.506) (-2059.204) [-2067.288] * (-2065.829) (-2066.437) (-2075.694) [-2076.684] -- 0:13:24
54000 -- (-2055.016) (-2071.209) (-2065.367) [-2058.511] * (-2068.306) (-2073.682) (-2090.344) [-2059.757] -- 0:13:25
55000 -- (-2053.857) (-2060.860) [-2067.073] (-2079.271) * [-2045.265] (-2073.304) (-2071.350) (-2059.000) -- 0:13:27
Average standard deviation of split frequencies: 0.033672
56000 -- (-2079.121) [-2057.965] (-2070.403) (-2076.814) * (-2063.362) (-2056.821) (-2070.307) [-2056.915] -- 0:13:29
57000 -- (-2056.682) (-2070.818) (-2068.239) [-2054.935] * (-2061.262) (-2054.666) (-2085.190) [-2072.322] -- 0:13:30
58000 -- [-2056.151] (-2065.875) (-2073.190) (-2080.451) * (-2057.556) (-2064.073) (-2077.286) [-2061.640] -- 0:13:32
59000 -- (-2063.150) (-2060.898) [-2066.199] (-2073.510) * (-2070.375) (-2073.136) (-2067.343) [-2083.944] -- 0:13:33
60000 -- (-2068.086) (-2060.587) (-2067.588) [-2054.881] * [-2058.581] (-2077.831) (-2077.698) (-2071.053) -- 0:13:34
Average standard deviation of split frequencies: 0.036162
61000 -- [-2066.116] (-2072.489) (-2067.179) (-2085.722) * [-2068.898] (-2060.682) (-2069.881) (-2085.928) -- 0:13:20
62000 -- (-2063.316) (-2060.459) [-2061.179] (-2073.733) * [-2068.179] (-2058.668) (-2069.079) (-2069.998) -- 0:13:21
63000 -- (-2080.520) (-2074.470) [-2057.942] (-2071.349) * (-2076.304) (-2054.162) [-2045.931] (-2074.080) -- 0:13:23
64000 -- (-2058.532) (-2066.665) [-2055.507] (-2067.395) * (-2070.129) [-2062.248] (-2069.492) (-2074.257) -- 0:13:24
65000 -- (-2075.038) (-2080.002) [-2053.971] (-2064.458) * (-2068.549) (-2077.869) [-2058.419] (-2057.814) -- 0:13:25
Average standard deviation of split frequencies: 0.028305
66000 -- (-2062.327) [-2074.162] (-2049.810) (-2069.558) * (-2065.965) (-2067.958) (-2063.599) [-2067.240] -- 0:13:26
67000 -- [-2062.331] (-2067.803) (-2054.932) (-2057.123) * (-2067.114) (-2077.033) [-2067.178] (-2066.352) -- 0:13:27
68000 -- (-2076.342) (-2068.517) (-2062.827) [-2065.182] * (-2066.074) (-2075.351) (-2069.704) [-2063.689] -- 0:13:28
69000 -- (-2065.934) (-2068.611) (-2066.269) [-2053.405] * [-2057.653] (-2077.120) (-2060.964) (-2066.004) -- 0:13:29
70000 -- (-2068.896) [-2046.579] (-2064.113) (-2067.308) * (-2052.411) (-2068.135) [-2056.872] (-2069.353) -- 0:13:17
Average standard deviation of split frequencies: 0.030788
71000 -- (-2073.780) [-2055.666] (-2056.714) (-2072.374) * [-2064.311] (-2079.352) (-2060.674) (-2057.118) -- 0:13:18
72000 -- (-2073.285) (-2055.825) (-2068.605) [-2070.219] * (-2090.572) (-2076.155) [-2062.111] (-2062.390) -- 0:13:19
73000 -- (-2063.825) (-2054.852) (-2075.300) [-2069.859] * (-2078.878) (-2073.104) (-2059.860) [-2066.459] -- 0:13:20
74000 -- (-2064.173) [-2064.704] (-2078.787) (-2065.151) * [-2063.362] (-2069.230) (-2052.113) (-2068.915) -- 0:13:20
75000 -- (-2052.103) (-2076.448) (-2088.047) [-2056.149] * [-2050.666] (-2061.672) (-2084.968) (-2075.048) -- 0:13:21
Average standard deviation of split frequencies: 0.026968
76000 -- [-2057.453] (-2077.005) (-2091.131) (-2056.691) * [-2066.193] (-2078.523) (-2054.129) (-2074.794) -- 0:13:22
77000 -- (-2056.613) (-2072.240) (-2078.777) [-2066.360] * (-2070.992) (-2056.052) [-2055.161] (-2071.899) -- 0:13:11
78000 -- [-2059.066] (-2064.509) (-2080.048) (-2090.312) * (-2070.989) (-2075.414) (-2057.445) [-2066.521] -- 0:13:11
79000 -- (-2063.149) (-2068.829) (-2052.318) [-2064.729] * (-2065.037) (-2068.278) [-2060.988] (-2077.177) -- 0:13:12
80000 -- (-2065.004) (-2070.964) [-2057.949] (-2058.941) * [-2050.990] (-2064.832) (-2078.233) (-2071.876) -- 0:13:13
Average standard deviation of split frequencies: 0.026054
81000 -- [-2057.458] (-2057.200) (-2077.098) (-2062.347) * [-2063.956] (-2062.343) (-2078.673) (-2068.279) -- 0:13:14
82000 -- [-2049.498] (-2063.020) (-2061.723) (-2077.876) * (-2062.112) (-2067.856) (-2069.429) [-2064.057] -- 0:13:14
83000 -- [-2053.244] (-2074.855) (-2058.636) (-2066.194) * (-2072.590) [-2053.714] (-2058.981) (-2067.056) -- 0:13:15
84000 -- (-2072.236) (-2063.393) [-2064.559] (-2062.645) * (-2066.275) [-2056.936] (-2063.169) (-2077.586) -- 0:13:16
85000 -- [-2055.629] (-2060.383) (-2067.731) (-2068.124) * (-2072.305) [-2054.848] (-2058.276) (-2056.486) -- 0:13:16
Average standard deviation of split frequencies: 0.023402
86000 -- [-2053.378] (-2068.337) (-2066.811) (-2065.328) * (-2066.545) [-2052.791] (-2067.320) (-2062.078) -- 0:13:17
87000 -- (-2067.191) (-2069.583) [-2050.264] (-2072.084) * (-2069.014) [-2055.812] (-2074.498) (-2069.290) -- 0:13:07
88000 -- (-2066.133) [-2062.225] (-2061.002) (-2058.699) * (-2070.699) [-2060.008] (-2068.232) (-2068.131) -- 0:13:07
89000 -- (-2068.702) (-2069.218) [-2065.740] (-2059.970) * (-2078.110) [-2058.421] (-2068.544) (-2076.125) -- 0:13:08
90000 -- (-2070.318) [-2072.482] (-2080.856) (-2066.154) * [-2054.389] (-2058.975) (-2074.570) (-2079.127) -- 0:13:08
Average standard deviation of split frequencies: 0.018718
91000 -- (-2079.392) (-2059.932) (-2073.523) [-2054.028] * (-2060.277) (-2076.973) [-2065.835] (-2097.959) -- 0:13:09
92000 -- (-2075.318) (-2058.335) (-2061.007) [-2058.445] * (-2066.025) (-2083.875) [-2072.038] (-2070.435) -- 0:13:09
93000 -- (-2064.137) (-2061.709) [-2049.934] (-2078.649) * (-2058.432) (-2067.690) (-2080.332) [-2053.340] -- 0:13:09
94000 -- (-2061.409) [-2067.567] (-2068.686) (-2078.803) * (-2077.120) (-2061.643) (-2078.898) [-2054.432] -- 0:13:10
95000 -- (-2058.886) (-2056.974) [-2058.982] (-2064.749) * (-2074.926) [-2067.658] (-2074.572) (-2054.346) -- 0:13:01
Average standard deviation of split frequencies: 0.017507
96000 -- (-2059.985) (-2060.630) (-2066.704) [-2068.193] * (-2081.081) (-2071.249) (-2077.759) [-2062.204] -- 0:13:01
97000 -- (-2069.433) (-2067.791) [-2053.410] (-2059.068) * (-2081.476) [-2058.107] (-2069.486) (-2063.786) -- 0:13:01
98000 -- (-2063.095) (-2064.245) [-2059.285] (-2071.339) * (-2061.346) (-2058.597) (-2061.732) [-2060.789] -- 0:13:02
99000 -- (-2085.223) (-2079.583) [-2051.493] (-2069.260) * (-2062.872) [-2076.916] (-2078.002) (-2068.495) -- 0:13:02
100000 -- (-2072.939) (-2069.334) (-2067.542) [-2062.714] * (-2059.612) (-2078.213) [-2054.043] (-2066.269) -- 0:13:03
Average standard deviation of split frequencies: 0.016695
101000 -- (-2061.242) (-2084.258) (-2067.694) [-2052.525] * (-2057.797) (-2071.772) (-2067.042) [-2073.781] -- 0:13:03
102000 -- (-2072.202) [-2058.108] (-2059.650) (-2061.193) * (-2070.119) [-2052.405] (-2065.692) (-2072.770) -- 0:13:03
103000 -- [-2056.937] (-2067.480) (-2061.520) (-2066.270) * (-2049.385) (-2067.611) [-2064.499] (-2066.634) -- 0:12:55
104000 -- (-2062.703) (-2059.515) (-2071.077) [-2058.696] * (-2065.942) (-2077.545) [-2059.316] (-2060.795) -- 0:12:55
105000 -- (-2067.326) [-2057.131] (-2069.759) (-2071.430) * (-2081.643) (-2069.694) [-2063.581] (-2061.838) -- 0:12:55
Average standard deviation of split frequencies: 0.015855
106000 -- (-2073.314) [-2072.987] (-2071.232) (-2078.005) * (-2072.388) (-2070.887) (-2065.133) [-2055.075] -- 0:12:55
107000 -- [-2061.280] (-2067.903) (-2080.071) (-2064.269) * [-2068.507] (-2060.323) (-2069.468) (-2069.613) -- 0:12:56
108000 -- (-2069.252) (-2062.835) (-2098.290) [-2065.405] * (-2091.824) (-2071.994) [-2066.680] (-2070.109) -- 0:12:56
109000 -- (-2060.419) (-2066.992) [-2058.621] (-2075.684) * (-2060.761) (-2077.551) (-2076.740) [-2057.443] -- 0:12:56
110000 -- (-2081.328) (-2059.844) (-2062.302) [-2068.591] * (-2074.065) [-2069.636] (-2067.163) (-2075.071) -- 0:12:56
Average standard deviation of split frequencies: 0.015974
111000 -- (-2075.685) (-2063.361) [-2059.014] (-2071.690) * (-2078.809) [-2054.330] (-2069.470) (-2067.591) -- 0:12:56
112000 -- (-2065.073) [-2066.575] (-2095.883) (-2068.024) * [-2053.219] (-2060.628) (-2070.621) (-2050.604) -- 0:12:49
113000 -- [-2054.256] (-2071.740) (-2083.569) (-2071.408) * [-2050.739] (-2084.995) (-2075.461) (-2060.268) -- 0:12:49
114000 -- [-2059.653] (-2069.554) (-2058.123) (-2066.535) * [-2059.512] (-2075.456) (-2070.017) (-2070.197) -- 0:12:49
115000 -- (-2076.353) (-2075.710) (-2064.172) [-2064.639] * (-2062.813) (-2058.623) (-2081.189) [-2063.660] -- 0:12:49
Average standard deviation of split frequencies: 0.015886
116000 -- [-2062.554] (-2063.791) (-2063.026) (-2068.394) * (-2070.379) (-2070.052) [-2060.384] (-2064.628) -- 0:12:49
117000 -- (-2060.298) [-2053.833] (-2065.715) (-2067.955) * (-2087.360) [-2052.740] (-2056.445) (-2070.553) -- 0:12:49
118000 -- (-2079.632) [-2063.797] (-2057.045) (-2060.977) * (-2076.750) (-2051.919) (-2065.849) [-2059.960] -- 0:12:49
119000 -- [-2070.437] (-2068.901) (-2062.001) (-2063.710) * (-2076.306) (-2065.150) [-2050.949] (-2080.630) -- 0:12:49
120000 -- (-2062.684) (-2075.205) [-2053.969] (-2063.076) * (-2071.511) (-2071.560) [-2054.226] (-2075.692) -- 0:12:42
Average standard deviation of split frequencies: 0.017402
121000 -- (-2082.289) (-2068.852) (-2057.085) [-2074.800] * [-2057.325] (-2058.483) (-2080.338) (-2075.062) -- 0:12:42
122000 -- (-2065.100) (-2070.076) [-2058.114] (-2069.151) * (-2067.221) [-2067.580] (-2077.468) (-2084.033) -- 0:12:42
123000 -- (-2059.131) [-2059.500] (-2066.584) (-2069.794) * (-2079.465) [-2062.511] (-2076.486) (-2068.675) -- 0:12:42
124000 -- (-2063.224) [-2061.304] (-2066.943) (-2067.454) * (-2066.487) (-2076.458) [-2052.248] (-2070.584) -- 0:12:42
125000 -- (-2077.734) (-2065.505) [-2057.165] (-2076.779) * (-2058.250) (-2089.773) [-2064.570] (-2070.971) -- 0:12:43
Average standard deviation of split frequencies: 0.018196
126000 -- (-2076.828) [-2058.085] (-2070.224) (-2073.584) * (-2060.115) [-2071.726] (-2064.679) (-2067.953) -- 0:12:43
127000 -- (-2081.801) [-2049.522] (-2059.857) (-2079.224) * (-2085.259) (-2067.109) [-2060.255] (-2063.368) -- 0:12:36
128000 -- (-2072.229) (-2058.543) [-2055.370] (-2060.652) * (-2058.502) (-2074.778) [-2063.187] (-2081.423) -- 0:12:36
129000 -- (-2065.851) [-2057.329] (-2065.203) (-2055.741) * (-2066.122) [-2059.790] (-2052.710) (-2073.947) -- 0:12:36
130000 -- (-2072.242) [-2072.251] (-2074.045) (-2064.271) * (-2056.251) [-2061.836] (-2069.043) (-2077.631) -- 0:12:36
Average standard deviation of split frequencies: 0.018202
131000 -- (-2064.629) (-2058.507) (-2066.628) [-2062.807] * (-2078.742) [-2052.891] (-2075.301) (-2064.751) -- 0:12:36
132000 -- [-2049.905] (-2072.721) (-2092.975) (-2075.081) * [-2074.445] (-2076.083) (-2054.610) (-2076.011) -- 0:12:36
133000 -- (-2062.717) (-2054.297) [-2061.455] (-2084.227) * (-2065.958) [-2059.648] (-2065.160) (-2063.491) -- 0:12:36
134000 -- (-2058.728) [-2050.145] (-2073.461) (-2082.408) * (-2084.642) (-2065.176) (-2077.257) [-2059.827] -- 0:12:29
135000 -- (-2054.762) (-2059.426) (-2061.040) [-2056.990] * (-2061.112) [-2056.862] (-2076.980) (-2068.485) -- 0:12:29
Average standard deviation of split frequencies: 0.017646
136000 -- [-2063.163] (-2060.505) (-2061.226) (-2065.703) * (-2066.518) [-2064.339] (-2071.943) (-2069.654) -- 0:12:29
137000 -- (-2067.688) [-2064.643] (-2069.809) (-2072.419) * (-2080.593) (-2061.568) [-2061.655] (-2064.774) -- 0:12:29
138000 -- (-2068.803) [-2057.751] (-2059.219) (-2066.763) * (-2064.730) [-2067.755] (-2067.733) (-2059.114) -- 0:12:29
139000 -- (-2061.177) [-2059.862] (-2073.545) (-2071.882) * (-2082.138) (-2063.574) (-2066.456) [-2063.253] -- 0:12:29
140000 -- (-2059.398) (-2066.852) (-2064.891) [-2053.823] * [-2059.659] (-2083.293) (-2075.345) (-2063.443) -- 0:12:23
Average standard deviation of split frequencies: 0.015080
141000 -- [-2068.245] (-2076.421) (-2069.056) (-2075.922) * [-2065.948] (-2072.046) (-2066.780) (-2081.751) -- 0:12:23
142000 -- (-2081.976) (-2079.402) [-2071.547] (-2078.881) * (-2063.938) (-2071.055) [-2072.753] (-2083.574) -- 0:12:23
143000 -- (-2063.408) (-2063.784) [-2077.482] (-2078.384) * [-2063.587] (-2076.667) (-2075.022) (-2075.808) -- 0:12:23
144000 -- [-2056.213] (-2059.537) (-2059.899) (-2067.435) * (-2080.883) (-2080.989) [-2070.895] (-2074.955) -- 0:12:23
145000 -- [-2073.904] (-2074.056) (-2061.564) (-2088.666) * (-2071.907) (-2079.559) [-2042.649] (-2077.893) -- 0:12:22
Average standard deviation of split frequencies: 0.018835
146000 -- (-2068.676) (-2084.114) [-2058.018] (-2078.292) * (-2067.875) (-2074.205) [-2069.169] (-2074.273) -- 0:12:22
147000 -- [-2057.924] (-2077.279) (-2071.131) (-2067.388) * (-2071.574) (-2072.207) [-2057.451] (-2085.136) -- 0:12:16
148000 -- (-2072.169) (-2087.517) [-2058.145] (-2069.575) * (-2071.218) (-2065.099) [-2070.582] (-2064.247) -- 0:12:16
149000 -- (-2074.649) (-2074.871) (-2083.671) [-2077.242] * (-2084.541) [-2053.311] (-2071.808) (-2063.634) -- 0:12:16
150000 -- (-2076.441) (-2064.743) [-2062.535] (-2067.179) * (-2066.508) [-2054.500] (-2072.539) (-2058.664) -- 0:12:16
Average standard deviation of split frequencies: 0.018062
151000 -- (-2072.247) (-2072.318) [-2065.316] (-2064.321) * (-2056.189) [-2051.256] (-2066.957) (-2077.835) -- 0:12:16
152000 -- (-2065.381) (-2065.955) (-2070.978) [-2065.066] * (-2067.824) (-2071.356) (-2067.217) [-2058.742] -- 0:12:16
153000 -- [-2068.868] (-2063.050) (-2073.717) (-2063.159) * (-2063.996) (-2057.703) [-2064.559] (-2070.395) -- 0:12:16
154000 -- (-2067.197) [-2058.801] (-2071.692) (-2063.907) * [-2065.406] (-2064.896) (-2072.816) (-2070.198) -- 0:12:10
155000 -- (-2075.141) (-2068.595) (-2076.221) [-2049.700] * [-2051.153] (-2069.501) (-2072.844) (-2076.330) -- 0:12:10
Average standard deviation of split frequencies: 0.019313
156000 -- (-2070.204) (-2069.493) (-2073.977) [-2053.854] * (-2065.932) [-2077.701] (-2073.854) (-2061.947) -- 0:12:10
157000 -- [-2062.485] (-2065.071) (-2098.699) (-2065.700) * [-2059.037] (-2070.594) (-2069.132) (-2079.044) -- 0:12:10
158000 -- [-2057.787] (-2064.805) (-2074.462) (-2076.692) * (-2062.549) [-2071.777] (-2071.325) (-2059.143) -- 0:12:10
159000 -- (-2060.385) (-2064.862) [-2068.209] (-2073.023) * [-2059.171] (-2065.570) (-2087.807) (-2060.584) -- 0:12:09
160000 -- (-2056.637) [-2067.994] (-2074.800) (-2080.425) * (-2071.154) (-2077.760) (-2069.243) [-2062.575] -- 0:12:09
Average standard deviation of split frequencies: 0.018138
161000 -- (-2053.894) [-2060.336] (-2082.387) (-2072.943) * (-2065.438) (-2079.800) [-2065.157] (-2064.997) -- 0:12:04
162000 -- (-2064.589) [-2061.824] (-2073.978) (-2079.609) * (-2062.773) [-2055.420] (-2064.605) (-2069.812) -- 0:12:04
163000 -- (-2066.130) [-2057.079] (-2070.737) (-2072.784) * (-2051.958) (-2082.706) [-2059.704] (-2081.222) -- 0:12:04
164000 -- [-2066.618] (-2061.237) (-2083.118) (-2061.169) * [-2064.291] (-2086.082) (-2058.828) (-2083.926) -- 0:12:03
165000 -- [-2060.885] (-2055.357) (-2071.051) (-2062.724) * (-2061.265) (-2085.412) (-2079.215) [-2061.017] -- 0:12:03
Average standard deviation of split frequencies: 0.017555
166000 -- [-2058.272] (-2065.473) (-2068.270) (-2073.663) * [-2062.342] (-2092.694) (-2078.950) (-2060.907) -- 0:12:03
167000 -- [-2062.438] (-2058.371) (-2066.352) (-2079.134) * (-2064.617) [-2060.627] (-2069.364) (-2062.323) -- 0:12:03
168000 -- [-2059.583] (-2063.597) (-2071.593) (-2062.025) * [-2063.010] (-2057.550) (-2084.058) (-2070.370) -- 0:11:58
169000 -- (-2082.862) (-2068.501) [-2058.789] (-2068.395) * (-2069.384) (-2056.954) (-2080.627) [-2061.435] -- 0:11:57
170000 -- (-2081.192) (-2054.356) (-2070.317) [-2055.913] * [-2081.263] (-2078.216) (-2080.213) (-2062.189) -- 0:11:57
Average standard deviation of split frequencies: 0.017452
171000 -- [-2068.542] (-2069.741) (-2065.816) (-2084.696) * (-2081.016) [-2060.894] (-2076.808) (-2069.587) -- 0:11:57
172000 -- (-2065.783) (-2076.216) [-2060.150] (-2075.386) * (-2070.755) [-2060.416] (-2069.219) (-2066.027) -- 0:11:57
173000 -- (-2079.307) (-2059.215) (-2065.438) [-2071.814] * [-2057.686] (-2063.861) (-2076.215) (-2068.891) -- 0:11:57
174000 -- [-2052.909] (-2050.821) (-2068.049) (-2078.320) * (-2053.438) [-2060.118] (-2062.173) (-2067.587) -- 0:11:56
175000 -- (-2050.397) (-2066.583) (-2076.362) [-2077.660] * [-2056.153] (-2059.943) (-2076.958) (-2068.598) -- 0:11:56
Average standard deviation of split frequencies: 0.017410
176000 -- (-2066.818) (-2075.619) (-2075.003) [-2066.181] * [-2053.973] (-2060.182) (-2075.946) (-2056.131) -- 0:11:56
177000 -- (-2070.183) [-2066.716] (-2068.496) (-2066.361) * (-2081.817) (-2080.272) [-2066.341] (-2061.067) -- 0:11:56
178000 -- [-2064.090] (-2067.608) (-2063.508) (-2087.997) * (-2060.381) (-2074.275) [-2063.156] (-2070.023) -- 0:11:51
179000 -- (-2061.688) (-2060.978) [-2068.081] (-2075.881) * (-2072.897) (-2073.543) [-2053.880] (-2068.211) -- 0:11:50
180000 -- [-2063.612] (-2074.924) (-2057.908) (-2065.679) * (-2080.826) (-2056.391) (-2062.483) [-2063.706] -- 0:11:50
Average standard deviation of split frequencies: 0.016011
181000 -- (-2081.833) [-2071.606] (-2054.290) (-2083.864) * [-2073.103] (-2070.093) (-2084.788) (-2065.816) -- 0:11:50
182000 -- (-2079.535) (-2077.368) [-2062.111] (-2080.501) * [-2053.267] (-2070.505) (-2082.954) (-2066.494) -- 0:11:50
183000 -- (-2083.026) (-2074.586) [-2059.410] (-2072.474) * (-2070.860) (-2070.422) (-2078.660) [-2068.060] -- 0:11:49
184000 -- (-2071.270) (-2067.072) [-2058.187] (-2070.308) * [-2063.031] (-2069.291) (-2060.417) (-2079.454) -- 0:11:49
185000 -- (-2064.476) (-2057.182) [-2052.071] (-2078.847) * [-2072.904] (-2075.749) (-2065.687) (-2058.480) -- 0:11:44
Average standard deviation of split frequencies: 0.016819
186000 -- (-2061.601) [-2060.975] (-2064.483) (-2072.180) * (-2056.958) (-2066.992) (-2065.385) [-2069.222] -- 0:11:44
187000 -- (-2070.989) (-2063.937) [-2055.724] (-2076.249) * (-2059.872) (-2086.831) (-2078.845) [-2069.085] -- 0:11:44
188000 -- (-2073.739) (-2086.474) (-2072.667) [-2057.406] * [-2066.006] (-2057.627) (-2070.862) (-2065.665) -- 0:11:44
189000 -- (-2065.188) (-2068.921) (-2082.778) [-2055.236] * (-2078.648) (-2068.808) [-2074.111] (-2063.286) -- 0:11:43
190000 -- (-2059.122) (-2060.753) (-2063.552) [-2047.509] * (-2076.399) (-2054.722) (-2064.041) [-2055.727] -- 0:11:43
Average standard deviation of split frequencies: 0.015958
191000 -- [-2064.641] (-2061.348) (-2084.424) (-2074.092) * (-2074.747) (-2070.588) [-2062.628] (-2065.030) -- 0:11:43
192000 -- (-2064.807) [-2067.704] (-2068.999) (-2067.948) * [-2068.938] (-2086.404) (-2075.566) (-2066.749) -- 0:11:38
193000 -- (-2062.499) (-2075.740) [-2069.796] (-2068.446) * (-2064.852) (-2062.219) (-2067.406) [-2056.837] -- 0:11:38
194000 -- (-2064.879) [-2058.827] (-2070.165) (-2090.151) * (-2081.314) (-2066.936) (-2073.567) [-2057.370] -- 0:11:37
195000 -- [-2059.539] (-2068.081) (-2069.892) (-2089.557) * (-2070.653) (-2059.933) (-2073.420) [-2051.796] -- 0:11:37
Average standard deviation of split frequencies: 0.016727
196000 -- (-2059.275) [-2058.696] (-2054.850) (-2071.620) * (-2066.477) (-2075.501) (-2054.953) [-2051.791] -- 0:11:37
197000 -- (-2070.350) (-2053.546) (-2071.972) [-2058.518] * (-2080.489) (-2073.378) [-2062.114] (-2072.960) -- 0:11:37
198000 -- (-2075.541) [-2057.377] (-2059.795) (-2070.151) * (-2076.299) (-2056.123) (-2068.060) [-2058.373] -- 0:11:36
199000 -- (-2078.062) (-2062.417) [-2077.970] (-2065.215) * [-2076.855] (-2072.660) (-2068.838) (-2078.379) -- 0:11:36
200000 -- [-2063.090] (-2064.454) (-2065.645) (-2072.305) * (-2056.824) (-2085.726) (-2065.611) [-2054.381] -- 0:11:36
Average standard deviation of split frequencies: 0.013882
201000 -- [-2057.463] (-2073.238) (-2075.003) (-2078.081) * (-2075.610) (-2082.005) [-2058.560] (-2082.631) -- 0:11:31
202000 -- (-2059.728) [-2065.661] (-2094.515) (-2073.910) * (-2061.366) (-2071.310) (-2061.534) [-2054.486] -- 0:11:31
203000 -- (-2061.701) (-2076.983) [-2050.738] (-2060.322) * (-2059.829) (-2079.169) (-2071.522) [-2056.006] -- 0:11:30
204000 -- (-2061.831) [-2066.595] (-2072.131) (-2066.864) * (-2065.160) (-2070.756) (-2083.835) [-2062.908] -- 0:11:30
205000 -- (-2070.931) (-2071.087) (-2059.066) [-2064.020] * (-2085.498) (-2052.494) (-2077.627) [-2071.145] -- 0:11:30
Average standard deviation of split frequencies: 0.012586
206000 -- [-2055.693] (-2080.337) (-2069.078) (-2059.414) * (-2067.509) (-2063.158) (-2071.547) [-2051.396] -- 0:11:29
207000 -- [-2060.974] (-2075.016) (-2068.708) (-2054.939) * [-2064.404] (-2072.876) (-2066.764) (-2073.532) -- 0:11:29
208000 -- (-2061.110) (-2064.243) [-2064.385] (-2070.257) * (-2087.856) (-2067.118) [-2058.340] (-2076.598) -- 0:11:29
209000 -- (-2064.438) (-2084.490) [-2060.967] (-2064.833) * (-2057.427) (-2063.484) [-2058.190] (-2082.483) -- 0:11:25
210000 -- (-2075.432) (-2071.274) (-2056.334) [-2059.178] * (-2057.341) [-2071.584] (-2077.570) (-2071.370) -- 0:11:24
Average standard deviation of split frequencies: 0.012206
211000 -- (-2079.698) (-2061.884) [-2053.881] (-2075.775) * (-2068.311) (-2085.157) [-2068.009] (-2057.098) -- 0:11:24
212000 -- (-2058.414) [-2059.172] (-2055.734) (-2065.538) * (-2066.569) [-2060.881] (-2071.962) (-2063.742) -- 0:11:23
213000 -- (-2072.483) [-2054.746] (-2069.528) (-2081.004) * [-2069.750] (-2063.008) (-2069.463) (-2070.274) -- 0:11:23
214000 -- (-2065.440) (-2055.545) [-2056.935] (-2087.441) * (-2067.703) (-2066.190) (-2065.088) [-2067.120] -- 0:11:23
215000 -- (-2080.817) (-2075.085) [-2052.416] (-2069.398) * (-2082.390) (-2085.188) [-2064.570] (-2071.303) -- 0:11:22
Average standard deviation of split frequencies: 0.013194
216000 -- (-2060.426) (-2058.350) (-2062.846) [-2055.031] * [-2050.915] (-2051.346) (-2080.432) (-2088.938) -- 0:11:22
217000 -- [-2059.189] (-2068.533) (-2079.609) (-2064.401) * (-2081.540) [-2061.670] (-2067.715) (-2075.274) -- 0:11:21
218000 -- [-2058.353] (-2067.415) (-2072.464) (-2077.346) * (-2056.590) [-2059.689] (-2082.394) (-2067.738) -- 0:11:21
219000 -- [-2055.222] (-2063.590) (-2071.551) (-2067.746) * (-2075.215) [-2063.915] (-2079.164) (-2059.491) -- 0:11:21
220000 -- (-2075.111) (-2064.531) [-2055.399] (-2085.381) * (-2062.094) (-2077.846) [-2071.856] (-2070.071) -- 0:11:17
Average standard deviation of split frequencies: 0.012429
221000 -- (-2063.878) [-2057.392] (-2066.881) (-2067.636) * [-2066.123] (-2071.487) (-2062.686) (-2055.483) -- 0:11:16
222000 -- (-2065.888) (-2059.648) [-2052.981] (-2069.150) * (-2065.031) (-2092.114) (-2060.265) [-2048.553] -- 0:11:16
223000 -- (-2083.363) (-2064.305) [-2056.576] (-2068.945) * [-2063.553] (-2075.706) (-2071.810) (-2063.884) -- 0:11:15
224000 -- (-2071.218) (-2062.794) (-2083.653) [-2057.514] * (-2066.361) [-2061.044] (-2069.553) (-2071.563) -- 0:11:15
225000 -- (-2051.600) (-2079.966) (-2071.068) [-2050.259] * [-2058.422] (-2064.732) (-2062.342) (-2060.635) -- 0:11:15
Average standard deviation of split frequencies: 0.013274
226000 -- (-2066.302) (-2061.923) [-2057.447] (-2090.702) * [-2054.577] (-2069.678) (-2070.925) (-2081.696) -- 0:11:14
227000 -- (-2069.785) (-2063.720) (-2052.676) [-2067.332] * [-2060.891] (-2066.394) (-2076.976) (-2069.003) -- 0:11:14
228000 -- (-2070.769) (-2062.623) (-2070.289) [-2072.139] * (-2067.141) [-2053.520] (-2078.455) (-2068.188) -- 0:11:10
229000 -- [-2066.864] (-2065.612) (-2070.027) (-2062.796) * (-2069.081) (-2046.853) [-2057.224] (-2056.174) -- 0:11:09
230000 -- (-2064.290) (-2068.739) (-2079.372) [-2058.297] * (-2054.023) (-2073.711) [-2057.558] (-2078.115) -- 0:11:09
Average standard deviation of split frequencies: 0.011705
231000 -- (-2079.168) (-2061.356) [-2063.517] (-2065.220) * (-2069.285) [-2061.140] (-2068.378) (-2077.909) -- 0:11:09
232000 -- (-2076.783) (-2063.744) [-2057.019] (-2060.863) * (-2082.147) (-2066.065) [-2058.353] (-2069.145) -- 0:11:08
233000 -- (-2065.850) (-2061.869) [-2063.339] (-2072.761) * [-2046.500] (-2062.510) (-2081.749) (-2072.342) -- 0:11:08
234000 -- (-2074.177) (-2054.053) [-2065.546] (-2081.043) * (-2061.390) [-2050.804] (-2068.845) (-2069.890) -- 0:11:07
235000 -- (-2078.584) [-2055.001] (-2060.315) (-2058.320) * (-2063.851) [-2050.557] (-2078.497) (-2068.410) -- 0:11:04
Average standard deviation of split frequencies: 0.013165
236000 -- (-2083.225) [-2059.054] (-2069.813) (-2072.130) * (-2053.085) [-2065.627] (-2065.210) (-2071.081) -- 0:11:03
237000 -- (-2059.337) (-2069.713) (-2067.558) [-2053.204] * (-2069.422) [-2063.080] (-2063.219) (-2063.117) -- 0:11:03
238000 -- (-2078.050) [-2050.875] (-2061.594) (-2053.955) * [-2061.122] (-2062.958) (-2073.355) (-2075.078) -- 0:11:02
239000 -- (-2079.781) [-2060.741] (-2063.984) (-2068.153) * (-2053.777) [-2063.799] (-2077.081) (-2066.580) -- 0:11:02
240000 -- (-2068.227) [-2058.548] (-2068.763) (-2070.513) * (-2058.573) [-2058.627] (-2069.539) (-2072.612) -- 0:11:01
Average standard deviation of split frequencies: 0.014334
241000 -- (-2087.945) (-2074.751) [-2063.568] (-2076.792) * (-2052.484) [-2057.167] (-2064.650) (-2078.902) -- 0:10:58
242000 -- [-2056.928] (-2072.968) (-2070.055) (-2061.249) * (-2061.631) (-2053.074) (-2075.751) [-2051.370] -- 0:10:57
243000 -- (-2052.055) [-2053.748] (-2070.606) (-2068.449) * (-2070.772) (-2054.519) (-2079.624) [-2051.341] -- 0:10:57
244000 -- [-2054.597] (-2067.617) (-2071.005) (-2078.269) * (-2059.272) (-2079.600) (-2067.776) [-2055.612] -- 0:10:56
245000 -- [-2055.035] (-2077.764) (-2073.465) (-2066.876) * (-2082.886) [-2063.648] (-2078.117) (-2060.563) -- 0:10:56
Average standard deviation of split frequencies: 0.013501
246000 -- [-2056.716] (-2072.369) (-2064.373) (-2054.381) * (-2080.741) [-2074.576] (-2062.771) (-2055.018) -- 0:10:55
247000 -- [-2069.705] (-2062.525) (-2081.602) (-2068.360) * (-2084.051) (-2063.970) (-2071.280) [-2057.305] -- 0:10:52
248000 -- (-2063.407) (-2060.438) [-2062.956] (-2058.608) * (-2073.969) [-2053.165] (-2068.392) (-2058.659) -- 0:10:51
249000 -- [-2071.639] (-2082.141) (-2066.363) (-2072.011) * (-2078.476) [-2058.140] (-2069.091) (-2070.865) -- 0:10:51
250000 -- [-2057.160] (-2074.358) (-2056.393) (-2061.566) * [-2073.004] (-2066.730) (-2082.884) (-2068.820) -- 0:10:51
Average standard deviation of split frequencies: 0.013421
251000 -- [-2061.193] (-2075.957) (-2077.609) (-2065.875) * (-2070.642) (-2062.739) (-2070.714) [-2058.526] -- 0:10:50
252000 -- (-2072.314) [-2055.157] (-2081.475) (-2051.233) * (-2068.293) (-2062.191) (-2080.354) [-2059.454] -- 0:10:50
253000 -- (-2090.135) [-2052.583] (-2065.017) (-2059.870) * [-2053.525] (-2054.169) (-2058.596) (-2082.064) -- 0:10:46
254000 -- [-2057.217] (-2078.660) (-2072.098) (-2067.209) * [-2064.251] (-2068.401) (-2066.155) (-2080.329) -- 0:10:46
255000 -- (-2067.081) [-2065.242] (-2066.840) (-2068.635) * (-2077.657) [-2057.277] (-2066.460) (-2075.015) -- 0:10:45
Average standard deviation of split frequencies: 0.012388
256000 -- (-2071.914) (-2062.192) (-2080.732) [-2060.766] * (-2084.003) (-2064.937) [-2057.085] (-2062.127) -- 0:10:45
257000 -- (-2061.544) (-2060.537) (-2082.601) [-2055.675] * (-2073.200) (-2079.137) [-2069.298] (-2062.629) -- 0:10:44
258000 -- (-2060.740) [-2052.278] (-2067.238) (-2061.284) * (-2060.667) (-2080.781) [-2054.555] (-2075.960) -- 0:10:44
259000 -- (-2063.308) [-2054.005] (-2059.332) (-2056.045) * (-2066.589) [-2056.867] (-2070.288) (-2074.265) -- 0:10:40
260000 -- (-2068.047) [-2063.095] (-2059.261) (-2072.501) * [-2057.823] (-2064.428) (-2055.049) (-2073.985) -- 0:10:40
Average standard deviation of split frequencies: 0.012166
261000 -- (-2063.683) (-2063.560) (-2058.374) [-2071.494] * [-2063.366] (-2078.245) (-2058.773) (-2070.381) -- 0:10:39
262000 -- [-2058.611] (-2059.567) (-2068.402) (-2074.152) * [-2056.846] (-2063.964) (-2060.228) (-2069.340) -- 0:10:39
263000 -- (-2061.690) [-2062.761] (-2070.430) (-2070.613) * (-2064.245) (-2068.326) [-2060.410] (-2067.559) -- 0:10:38
264000 -- (-2059.832) (-2081.013) (-2055.207) [-2070.223] * [-2067.334] (-2082.420) (-2063.689) (-2087.335) -- 0:10:38
265000 -- (-2063.441) (-2071.978) [-2058.554] (-2068.850) * (-2068.253) [-2056.800] (-2081.695) (-2079.842) -- 0:10:37
Average standard deviation of split frequencies: 0.011519
266000 -- (-2061.460) (-2069.556) (-2064.162) [-2056.708] * (-2068.264) [-2054.318] (-2072.835) (-2061.039) -- 0:10:37
267000 -- [-2054.257] (-2068.653) (-2064.627) (-2068.926) * (-2059.072) (-2062.004) [-2053.321] (-2067.522) -- 0:10:34
268000 -- (-2063.961) (-2060.904) [-2053.371] (-2070.682) * (-2074.447) (-2050.866) [-2063.633] (-2068.508) -- 0:10:33
269000 -- (-2065.457) (-2052.095) [-2061.733] (-2080.505) * (-2060.349) (-2070.389) [-2056.093] (-2078.444) -- 0:10:33
270000 -- (-2079.976) [-2069.699] (-2099.556) (-2082.202) * (-2069.406) (-2073.553) [-2057.128] (-2078.171) -- 0:10:32
Average standard deviation of split frequencies: 0.011479
271000 -- (-2080.376) [-2058.786] (-2071.599) (-2096.198) * [-2048.751] (-2075.568) (-2058.686) (-2068.506) -- 0:10:32
272000 -- (-2067.822) [-2052.271] (-2065.119) (-2062.546) * [-2050.123] (-2079.508) (-2075.782) (-2072.411) -- 0:10:31
273000 -- (-2062.873) (-2073.506) (-2062.308) [-2052.659] * [-2068.270] (-2084.996) (-2069.923) (-2067.488) -- 0:10:31
274000 -- [-2057.585] (-2068.285) (-2067.128) (-2079.450) * (-2072.013) (-2081.874) (-2073.333) [-2054.942] -- 0:10:27
275000 -- (-2065.099) (-2069.866) [-2060.313] (-2065.000) * [-2069.546] (-2070.372) (-2060.752) (-2055.984) -- 0:10:27
Average standard deviation of split frequencies: 0.011412
276000 -- (-2065.459) (-2066.268) (-2066.996) [-2063.426] * (-2090.494) (-2064.887) [-2067.534] (-2057.420) -- 0:10:26
277000 -- (-2064.299) (-2069.585) [-2061.339] (-2080.848) * (-2076.145) (-2071.421) (-2061.810) [-2067.671] -- 0:10:26
278000 -- (-2077.629) (-2072.787) (-2058.299) [-2072.320] * (-2067.865) [-2057.817] (-2057.407) (-2065.295) -- 0:10:25
279000 -- (-2076.655) [-2077.655] (-2055.800) (-2086.415) * (-2073.138) (-2069.831) (-2056.948) [-2064.200] -- 0:10:25
280000 -- [-2064.602] (-2077.765) (-2066.639) (-2064.016) * [-2059.016] (-2073.000) (-2073.724) (-2065.468) -- 0:10:24
Average standard deviation of split frequencies: 0.011986
281000 -- (-2068.347) (-2070.205) (-2071.118) [-2055.077] * (-2064.664) [-2060.538] (-2067.852) (-2079.640) -- 0:10:24
282000 -- (-2070.027) (-2068.671) [-2069.791] (-2065.969) * [-2063.611] (-2075.484) (-2058.326) (-2097.545) -- 0:10:21
283000 -- (-2080.286) (-2072.206) (-2066.238) [-2053.767] * (-2065.309) (-2075.366) [-2056.705] (-2058.443) -- 0:10:20
284000 -- (-2070.615) (-2067.103) (-2076.870) [-2059.386] * [-2053.518] (-2070.634) (-2069.415) (-2069.441) -- 0:10:20
285000 -- [-2068.310] (-2065.334) (-2063.392) (-2073.590) * (-2063.621) (-2066.242) [-2062.770] (-2064.887) -- 0:10:19
Average standard deviation of split frequencies: 0.011163
286000 -- [-2059.195] (-2078.362) (-2072.272) (-2058.930) * (-2068.452) [-2063.481] (-2058.082) (-2082.925) -- 0:10:19
287000 -- [-2063.696] (-2072.354) (-2081.327) (-2068.437) * (-2080.956) (-2072.388) [-2060.589] (-2076.789) -- 0:10:18
288000 -- (-2083.755) (-2063.656) [-2050.757] (-2064.015) * (-2054.871) (-2068.867) (-2063.043) [-2053.026] -- 0:10:18
289000 -- (-2069.293) [-2067.494] (-2078.726) (-2078.276) * [-2062.951] (-2077.564) (-2064.390) (-2067.018) -- 0:10:15
290000 -- [-2050.314] (-2064.649) (-2070.532) (-2072.431) * (-2070.878) [-2064.145] (-2065.484) (-2073.590) -- 0:10:14
Average standard deviation of split frequencies: 0.011353
291000 -- [-2066.119] (-2062.377) (-2070.480) (-2071.458) * [-2066.423] (-2066.887) (-2070.925) (-2070.547) -- 0:10:13
292000 -- (-2067.900) [-2056.599] (-2087.352) (-2077.455) * (-2064.431) [-2064.542] (-2062.288) (-2070.028) -- 0:10:13
293000 -- (-2080.476) [-2068.158] (-2065.667) (-2071.799) * (-2067.918) (-2064.459) (-2071.614) [-2068.453] -- 0:10:12
294000 -- (-2059.255) (-2072.238) [-2062.159] (-2057.380) * [-2061.582] (-2066.395) (-2073.071) (-2076.816) -- 0:10:12
295000 -- [-2054.792] (-2062.778) (-2060.723) (-2068.984) * (-2090.627) [-2047.813] (-2056.529) (-2067.117) -- 0:10:11
Average standard deviation of split frequencies: 0.011365
296000 -- (-2054.641) (-2071.392) [-2055.169] (-2064.538) * [-2059.946] (-2049.716) (-2090.608) (-2078.673) -- 0:10:08
297000 -- (-2048.766) (-2066.119) [-2077.475] (-2064.674) * (-2063.479) [-2052.253] (-2074.407) (-2068.057) -- 0:10:08
298000 -- (-2055.835) (-2087.395) (-2056.553) [-2061.780] * [-2059.774] (-2061.105) (-2075.898) (-2060.541) -- 0:10:07
299000 -- (-2061.981) [-2086.264] (-2062.387) (-2050.934) * [-2052.141] (-2057.185) (-2061.102) (-2075.974) -- 0:10:07
300000 -- (-2062.574) (-2079.870) [-2063.155] (-2061.159) * [-2064.779] (-2062.470) (-2072.261) (-2080.801) -- 0:10:06
Average standard deviation of split frequencies: 0.011902
301000 -- [-2047.357] (-2081.500) (-2072.070) (-2060.231) * (-2057.573) [-2073.973] (-2075.420) (-2075.570) -- 0:10:06
302000 -- (-2075.484) (-2070.764) [-2066.424] (-2072.591) * [-2047.806] (-2092.460) (-2071.162) (-2063.902) -- 0:10:05
303000 -- (-2063.422) [-2058.633] (-2057.665) (-2063.479) * (-2077.518) [-2069.206] (-2073.503) (-2062.506) -- 0:10:02
304000 -- (-2056.316) [-2058.104] (-2062.987) (-2065.505) * [-2060.979] (-2074.546) (-2066.855) (-2060.253) -- 0:10:02
305000 -- [-2063.760] (-2063.370) (-2076.164) (-2074.602) * (-2066.931) (-2075.802) (-2060.025) [-2055.209] -- 0:10:01
Average standard deviation of split frequencies: 0.011274
306000 -- (-2068.307) (-2070.972) [-2050.544] (-2062.760) * (-2080.831) (-2049.184) [-2059.625] (-2065.230) -- 0:10:01
307000 -- (-2079.108) [-2048.605] (-2063.747) (-2068.807) * [-2065.555] (-2068.762) (-2068.801) (-2062.436) -- 0:10:00
308000 -- (-2060.420) [-2050.467] (-2079.804) (-2051.167) * (-2064.633) [-2062.986] (-2065.996) (-2069.006) -- 0:09:59
309000 -- [-2065.477] (-2061.551) (-2064.528) (-2061.072) * (-2073.327) (-2072.966) [-2056.134] (-2076.201) -- 0:09:59
310000 -- (-2072.820) [-2058.960] (-2054.618) (-2056.393) * (-2061.816) (-2081.986) [-2058.544] (-2071.434) -- 0:09:58
Average standard deviation of split frequencies: 0.011174
311000 -- (-2076.977) (-2066.316) [-2056.542] (-2074.837) * [-2065.769] (-2070.242) (-2062.910) (-2076.791) -- 0:09:55
312000 -- (-2079.655) (-2065.447) (-2062.078) [-2082.647] * (-2076.596) [-2059.236] (-2079.019) (-2073.246) -- 0:09:55
313000 -- (-2070.684) [-2062.082] (-2074.660) (-2062.906) * (-2088.715) (-2076.407) (-2075.891) [-2068.491] -- 0:09:54
314000 -- (-2075.044) (-2068.852) (-2065.009) [-2066.643] * [-2064.713] (-2059.334) (-2070.734) (-2067.149) -- 0:09:54
315000 -- (-2064.448) (-2063.437) (-2067.958) [-2059.762] * (-2075.675) [-2059.353] (-2061.773) (-2075.981) -- 0:09:53
Average standard deviation of split frequencies: 0.010714
316000 -- [-2061.137] (-2063.659) (-2091.416) (-2060.171) * (-2082.991) (-2072.670) (-2075.320) [-2058.187] -- 0:09:53
317000 -- (-2075.593) [-2061.947] (-2072.025) (-2064.945) * (-2064.919) [-2066.239] (-2072.689) (-2062.199) -- 0:09:50
318000 -- (-2069.001) (-2078.610) (-2083.802) [-2064.385] * (-2061.523) [-2063.732] (-2075.205) (-2083.741) -- 0:09:49
319000 -- [-2061.648] (-2067.428) (-2076.169) (-2080.097) * (-2056.734) [-2060.620] (-2064.045) (-2073.989) -- 0:09:49
320000 -- [-2067.455] (-2078.779) (-2065.398) (-2068.703) * (-2058.481) [-2063.849] (-2068.683) (-2069.821) -- 0:09:48
Average standard deviation of split frequencies: 0.011427
321000 -- (-2064.205) (-2060.988) (-2079.764) [-2059.398] * (-2082.763) (-2068.494) [-2063.893] (-2081.629) -- 0:09:48
322000 -- (-2065.627) (-2073.480) (-2074.974) [-2057.376] * (-2076.662) (-2061.861) [-2050.383] (-2079.908) -- 0:09:47
323000 -- (-2084.567) (-2052.754) (-2099.990) [-2052.398] * (-2059.273) [-2062.681] (-2074.239) (-2063.936) -- 0:09:46
324000 -- [-2063.851] (-2071.491) (-2072.704) (-2062.855) * (-2069.045) [-2063.590] (-2070.997) (-2068.579) -- 0:09:44
325000 -- (-2073.024) [-2055.765] (-2086.494) (-2059.557) * (-2068.187) (-2078.948) [-2078.316] (-2074.734) -- 0:09:43
Average standard deviation of split frequencies: 0.011765
326000 -- [-2064.324] (-2063.782) (-2060.879) (-2066.716) * (-2068.898) (-2065.489) [-2060.154] (-2074.081) -- 0:09:43
327000 -- (-2066.221) (-2063.998) (-2070.965) [-2072.874] * [-2051.571] (-2072.783) (-2064.928) (-2068.709) -- 0:09:42
328000 -- (-2062.451) [-2075.946] (-2060.781) (-2063.314) * [-2065.866] (-2068.569) (-2069.140) (-2063.227) -- 0:09:41
329000 -- (-2059.368) (-2065.855) (-2064.158) [-2051.603] * (-2055.517) [-2058.778] (-2065.126) (-2064.814) -- 0:09:41
330000 -- [-2059.089] (-2064.858) (-2060.862) (-2061.707) * (-2064.050) [-2063.436] (-2078.078) (-2076.691) -- 0:09:40
Average standard deviation of split frequencies: 0.011275
331000 -- (-2074.762) (-2071.187) (-2060.665) [-2063.216] * (-2064.012) (-2064.925) (-2073.399) [-2063.516] -- 0:09:38
332000 -- [-2063.457] (-2075.427) (-2068.216) (-2069.972) * (-2059.160) (-2077.795) [-2067.525] (-2054.748) -- 0:09:37
333000 -- (-2059.078) (-2080.625) [-2072.999] (-2063.463) * (-2081.888) [-2070.286] (-2072.200) (-2059.839) -- 0:09:36
334000 -- [-2056.147] (-2068.786) (-2063.012) (-2083.633) * (-2075.378) (-2072.636) (-2062.803) [-2068.092] -- 0:09:36
335000 -- (-2062.876) (-2066.777) (-2064.678) [-2073.060] * [-2072.082] (-2064.357) (-2058.532) (-2067.239) -- 0:09:35
Average standard deviation of split frequencies: 0.011989
336000 -- (-2061.732) [-2054.136] (-2078.162) (-2071.779) * (-2073.584) (-2068.186) [-2059.611] (-2085.025) -- 0:09:35
337000 -- [-2068.007] (-2068.315) (-2065.342) (-2067.677) * [-2062.046] (-2080.874) (-2066.263) (-2073.067) -- 0:09:32
338000 -- [-2059.519] (-2057.994) (-2072.049) (-2067.296) * (-2070.763) [-2062.715] (-2080.646) (-2064.565) -- 0:09:31
339000 -- (-2069.430) [-2060.745] (-2065.029) (-2061.169) * [-2070.470] (-2054.651) (-2070.029) (-2065.141) -- 0:09:31
340000 -- (-2063.913) (-2057.922) [-2056.072] (-2062.647) * (-2067.622) (-2059.194) (-2064.343) [-2050.224] -- 0:09:30
Average standard deviation of split frequencies: 0.012202
341000 -- (-2060.562) (-2071.449) [-2063.548] (-2065.415) * [-2062.882] (-2059.467) (-2080.182) (-2068.648) -- 0:09:30
342000 -- (-2075.140) [-2049.042] (-2049.885) (-2070.080) * (-2058.807) (-2056.040) [-2055.425] (-2065.684) -- 0:09:29
343000 -- (-2066.538) [-2061.148] (-2061.897) (-2063.182) * (-2067.614) (-2059.722) [-2062.680] (-2065.452) -- 0:09:28
344000 -- (-2072.199) (-2075.638) [-2062.453] (-2082.192) * [-2060.966] (-2065.724) (-2056.364) (-2063.296) -- 0:09:28
345000 -- (-2052.021) [-2056.535] (-2070.715) (-2079.492) * [-2057.716] (-2066.667) (-2066.066) (-2067.317) -- 0:09:27
Average standard deviation of split frequencies: 0.012324
346000 -- (-2071.027) (-2066.831) [-2075.737] (-2077.599) * (-2065.598) (-2077.678) [-2061.291] (-2079.719) -- 0:09:27
347000 -- (-2059.646) [-2055.921] (-2068.757) (-2066.064) * (-2078.644) (-2088.441) (-2059.390) [-2056.357] -- 0:09:26
348000 -- (-2075.865) (-2067.332) [-2073.828] (-2062.620) * (-2076.486) (-2065.990) (-2076.081) [-2054.916] -- 0:09:23
349000 -- (-2085.251) [-2060.529] (-2067.262) (-2065.320) * (-2070.160) [-2060.800] (-2081.281) (-2057.977) -- 0:09:23
350000 -- (-2070.367) [-2056.639] (-2067.281) (-2070.211) * (-2066.752) [-2064.151] (-2067.034) (-2052.543) -- 0:09:22
Average standard deviation of split frequencies: 0.012649
351000 -- [-2074.686] (-2067.425) (-2066.046) (-2075.284) * (-2070.436) [-2058.867] (-2070.967) (-2058.131) -- 0:09:22
352000 -- (-2074.279) (-2065.693) (-2076.711) [-2066.742] * (-2073.050) (-2067.570) (-2076.788) [-2071.266] -- 0:09:21
353000 -- (-2074.809) [-2069.849] (-2079.971) (-2062.012) * (-2061.423) (-2066.632) (-2079.237) [-2054.527] -- 0:09:20
354000 -- (-2053.191) [-2063.796] (-2068.568) (-2068.250) * (-2075.477) (-2059.341) (-2067.433) [-2057.042] -- 0:09:20
355000 -- [-2063.634] (-2076.430) (-2053.797) (-2064.791) * (-2073.727) (-2066.459) (-2070.538) [-2062.085] -- 0:09:17
Average standard deviation of split frequencies: 0.012218
356000 -- (-2056.156) (-2059.465) [-2058.088] (-2077.145) * (-2088.271) (-2073.353) (-2067.354) [-2063.566] -- 0:09:17
357000 -- [-2065.861] (-2071.422) (-2071.494) (-2079.921) * (-2055.359) (-2066.902) (-2075.153) [-2079.983] -- 0:09:16
358000 -- (-2067.090) [-2051.411] (-2075.201) (-2075.928) * [-2053.733] (-2066.797) (-2067.204) (-2075.409) -- 0:09:15
359000 -- (-2070.448) (-2067.541) (-2055.261) [-2068.647] * (-2067.146) [-2055.960] (-2064.360) (-2080.878) -- 0:09:15
360000 -- (-2077.078) (-2078.406) [-2058.965] (-2059.314) * (-2075.834) (-2066.968) [-2061.168] (-2056.820) -- 0:09:14
Average standard deviation of split frequencies: 0.012120
361000 -- (-2064.927) (-2073.578) (-2060.435) [-2057.305] * [-2059.991] (-2071.461) (-2067.949) (-2059.646) -- 0:09:14
362000 -- (-2088.147) (-2069.787) [-2058.248] (-2054.587) * (-2066.897) (-2059.021) [-2065.978] (-2075.086) -- 0:09:11
363000 -- [-2055.580] (-2071.534) (-2075.928) (-2049.802) * (-2063.256) (-2053.805) [-2065.572] (-2082.413) -- 0:09:11
364000 -- (-2071.036) [-2060.768] (-2063.021) (-2064.805) * (-2080.524) (-2055.452) [-2062.355] (-2052.030) -- 0:09:10
365000 -- (-2083.205) (-2055.212) (-2060.541) [-2063.798] * (-2065.751) [-2062.688] (-2071.502) (-2067.409) -- 0:09:09
Average standard deviation of split frequencies: 0.011943
366000 -- (-2073.012) (-2064.525) (-2071.897) [-2067.682] * [-2059.580] (-2069.756) (-2057.499) (-2068.475) -- 0:09:09
367000 -- (-2083.671) [-2062.314] (-2062.502) (-2077.868) * (-2072.709) (-2071.100) [-2050.150] (-2078.938) -- 0:09:08
368000 -- (-2074.731) [-2067.047] (-2068.782) (-2073.327) * [-2071.890] (-2062.470) (-2071.463) (-2071.740) -- 0:09:07
369000 -- (-2065.183) [-2059.957] (-2065.118) (-2056.125) * [-2061.960] (-2061.976) (-2063.002) (-2067.978) -- 0:09:07
370000 -- [-2062.201] (-2068.218) (-2072.040) (-2059.659) * [-2070.124] (-2061.446) (-2064.075) (-2089.630) -- 0:09:06
Average standard deviation of split frequencies: 0.011388
371000 -- [-2056.976] (-2074.126) (-2076.152) (-2067.617) * [-2068.028] (-2063.467) (-2067.580) (-2066.133) -- 0:09:04
372000 -- [-2058.289] (-2069.211) (-2064.283) (-2063.193) * (-2073.209) (-2064.614) (-2067.190) [-2060.269] -- 0:09:03
373000 -- [-2064.396] (-2086.600) (-2068.295) (-2060.312) * (-2061.345) (-2088.814) [-2064.000] (-2067.702) -- 0:09:02
374000 -- (-2080.192) [-2066.469] (-2068.079) (-2077.523) * (-2070.510) (-2077.541) (-2056.922) [-2053.652] -- 0:09:02
375000 -- (-2062.529) (-2068.957) (-2059.956) [-2059.752] * (-2082.380) (-2069.995) [-2057.124] (-2063.849) -- 0:09:01
Average standard deviation of split frequencies: 0.011341
376000 -- (-2078.192) (-2057.554) [-2058.964] (-2055.623) * [-2059.450] (-2065.138) (-2070.382) (-2068.241) -- 0:09:01
377000 -- (-2063.962) (-2066.591) [-2048.621] (-2067.603) * [-2054.799] (-2082.424) (-2067.451) (-2074.849) -- 0:09:00
378000 -- [-2057.448] (-2069.087) (-2065.780) (-2061.464) * [-2062.701] (-2065.555) (-2083.843) (-2064.138) -- 0:08:59
379000 -- [-2047.110] (-2085.443) (-2062.492) (-2054.311) * (-2067.690) (-2095.112) [-2060.451] (-2063.211) -- 0:08:57
380000 -- [-2064.376] (-2063.602) (-2062.433) (-2054.836) * (-2084.895) (-2074.451) (-2066.106) [-2077.250] -- 0:08:56
Average standard deviation of split frequencies: 0.011821
381000 -- (-2071.857) (-2082.508) [-2066.932] (-2081.467) * (-2063.602) (-2067.007) [-2067.135] (-2069.346) -- 0:08:56
382000 -- [-2056.495] (-2085.735) (-2067.829) (-2065.686) * (-2054.699) (-2078.454) [-2059.068] (-2058.835) -- 0:08:55
383000 -- (-2091.117) (-2083.447) (-2072.615) [-2065.883] * [-2058.318] (-2055.532) (-2058.139) (-2069.748) -- 0:08:54
384000 -- (-2072.152) (-2080.988) (-2062.352) [-2049.354] * (-2056.426) (-2068.105) (-2059.512) [-2052.457] -- 0:08:54
385000 -- (-2068.344) (-2062.753) (-2075.960) [-2056.300] * (-2072.963) (-2065.211) [-2055.868] (-2068.351) -- 0:08:53
Average standard deviation of split frequencies: 0.010936
386000 -- (-2056.581) (-2076.629) [-2051.616] (-2058.108) * (-2069.507) (-2064.122) [-2064.504] (-2081.833) -- 0:08:52
387000 -- [-2059.827] (-2075.872) (-2051.288) (-2068.101) * (-2077.799) (-2056.103) [-2052.357] (-2077.008) -- 0:08:52
388000 -- (-2073.257) [-2063.526] (-2066.516) (-2069.604) * (-2067.257) (-2058.484) (-2072.032) [-2049.881] -- 0:08:51
389000 -- (-2056.248) (-2073.016) (-2067.450) [-2060.312] * (-2066.989) (-2082.831) [-2065.485] (-2069.195) -- 0:08:49
390000 -- (-2066.686) (-2073.243) (-2068.153) [-2062.653] * (-2063.072) [-2066.367] (-2054.418) (-2067.973) -- 0:08:48
Average standard deviation of split frequencies: 0.010860
391000 -- (-2064.051) [-2063.124] (-2058.455) (-2063.992) * (-2061.601) [-2063.332] (-2064.179) (-2067.899) -- 0:08:48
392000 -- (-2066.081) (-2064.365) (-2056.614) [-2059.640] * (-2060.055) [-2075.173] (-2072.963) (-2076.404) -- 0:08:47
393000 -- (-2060.527) [-2056.654] (-2069.015) (-2067.671) * [-2059.794] (-2069.726) (-2063.510) (-2068.564) -- 0:08:46
394000 -- (-2063.930) [-2056.799] (-2073.338) (-2070.309) * (-2054.291) [-2058.341] (-2077.226) (-2069.195) -- 0:08:46
395000 -- [-2076.599] (-2056.167) (-2065.333) (-2056.095) * [-2058.668] (-2074.884) (-2076.006) (-2067.168) -- 0:08:45
Average standard deviation of split frequencies: 0.010822
396000 -- (-2070.121) [-2060.809] (-2066.840) (-2059.246) * [-2064.136] (-2057.634) (-2078.571) (-2077.250) -- 0:08:44
397000 -- (-2091.452) (-2064.607) (-2080.495) [-2065.529] * (-2069.687) [-2068.565] (-2072.629) (-2058.563) -- 0:08:44
398000 -- [-2072.727] (-2059.135) (-2066.235) (-2076.158) * [-2061.922] (-2071.790) (-2063.738) (-2065.627) -- 0:08:41
399000 -- (-2084.639) (-2069.457) (-2077.410) [-2081.400] * (-2061.459) (-2085.245) (-2061.652) [-2049.597] -- 0:08:41
400000 -- (-2076.256) (-2069.280) [-2051.215] (-2057.766) * (-2068.671) (-2070.306) [-2064.676] (-2061.622) -- 0:08:40
Average standard deviation of split frequencies: 0.010108
401000 -- (-2074.767) (-2071.903) [-2057.909] (-2053.386) * (-2069.207) [-2059.190] (-2054.300) (-2069.216) -- 0:08:39
402000 -- (-2073.786) (-2059.328) [-2059.155] (-2060.150) * (-2061.812) (-2060.235) (-2064.159) [-2080.440] -- 0:08:39
403000 -- (-2068.272) [-2055.064] (-2069.370) (-2067.307) * (-2071.526) [-2071.709] (-2057.574) (-2065.803) -- 0:08:38
404000 -- (-2073.097) (-2073.865) (-2068.872) [-2056.253] * (-2072.112) (-2076.123) (-2069.835) [-2067.894] -- 0:08:37
405000 -- (-2078.310) [-2064.865] (-2055.954) (-2072.432) * [-2046.250] (-2059.232) (-2084.009) (-2063.445) -- 0:08:37
Average standard deviation of split frequencies: 0.010292
406000 -- (-2077.993) [-2072.552] (-2068.839) (-2079.010) * [-2055.466] (-2074.216) (-2073.478) (-2053.028) -- 0:08:34
407000 -- [-2056.600] (-2061.393) (-2059.942) (-2062.452) * [-2056.418] (-2067.119) (-2056.510) (-2072.300) -- 0:08:34
408000 -- (-2071.080) (-2063.431) [-2070.558] (-2066.798) * (-2060.418) (-2064.237) [-2054.494] (-2077.415) -- 0:08:33
409000 -- (-2073.510) [-2061.942] (-2062.096) (-2069.554) * [-2052.078] (-2088.297) (-2073.173) (-2080.694) -- 0:08:32
410000 -- (-2062.616) (-2064.437) (-2061.519) [-2059.695] * (-2071.974) (-2066.675) (-2068.659) [-2067.214] -- 0:08:32
Average standard deviation of split frequencies: 0.010070
411000 -- (-2067.508) (-2058.824) (-2076.783) [-2062.296] * [-2058.558] (-2077.080) (-2062.518) (-2061.235) -- 0:08:31
412000 -- (-2069.699) (-2070.359) (-2069.776) [-2068.871] * (-2076.618) [-2064.320] (-2082.367) (-2073.192) -- 0:08:30
413000 -- (-2067.960) (-2081.129) (-2060.069) [-2071.080] * (-2062.996) (-2067.835) (-2057.502) [-2056.067] -- 0:08:28
414000 -- (-2068.382) (-2063.686) [-2063.842] (-2055.461) * (-2056.335) (-2063.618) (-2059.265) [-2059.978] -- 0:08:28
415000 -- (-2070.548) (-2067.379) (-2063.062) [-2073.082] * (-2074.101) (-2060.363) (-2080.918) [-2067.680] -- 0:08:27
Average standard deviation of split frequencies: 0.010302
416000 -- (-2062.709) (-2066.837) [-2058.278] (-2088.857) * (-2074.509) [-2062.404] (-2083.021) (-2067.590) -- 0:08:26
417000 -- [-2056.232] (-2068.972) (-2062.476) (-2063.037) * (-2061.675) [-2056.698] (-2069.111) (-2064.335) -- 0:08:26
418000 -- (-2057.995) [-2060.587] (-2069.164) (-2078.319) * (-2061.472) [-2052.920] (-2078.759) (-2063.434) -- 0:08:25
419000 -- [-2058.386] (-2066.844) (-2063.993) (-2061.190) * [-2062.050] (-2057.187) (-2075.330) (-2055.640) -- 0:08:24
420000 -- (-2055.733) [-2068.031] (-2070.516) (-2071.991) * [-2072.133] (-2069.975) (-2061.961) (-2064.455) -- 0:08:24
Average standard deviation of split frequencies: 0.010086
421000 -- (-2056.132) (-2062.014) (-2054.505) [-2058.643] * (-2064.092) (-2093.285) [-2051.665] (-2065.585) -- 0:08:21
422000 -- (-2071.688) (-2060.025) (-2057.524) [-2057.760] * (-2055.052) [-2051.583] (-2086.410) (-2076.291) -- 0:08:21
423000 -- (-2060.334) (-2075.869) [-2060.535] (-2077.347) * (-2062.446) [-2066.724] (-2068.800) (-2068.919) -- 0:08:20
424000 -- [-2052.985] (-2078.955) (-2069.305) (-2062.638) * (-2068.224) (-2068.183) (-2067.490) [-2065.408] -- 0:08:19
425000 -- (-2066.809) (-2080.996) (-2059.334) [-2061.995] * (-2072.365) [-2058.651] (-2067.022) (-2067.959) -- 0:08:19
Average standard deviation of split frequencies: 0.009859
426000 -- (-2071.598) (-2066.283) (-2063.449) [-2059.799] * (-2067.213) (-2064.647) [-2066.755] (-2076.744) -- 0:08:18
427000 -- [-2065.510] (-2065.303) (-2063.419) (-2068.484) * (-2069.266) [-2061.531] (-2064.851) (-2069.831) -- 0:08:17
428000 -- (-2088.744) (-2067.163) (-2087.555) [-2057.721] * (-2066.777) (-2062.783) [-2054.733] (-2071.048) -- 0:08:15
429000 -- (-2082.086) [-2054.766] (-2087.468) (-2062.082) * (-2071.444) (-2060.838) [-2053.193] (-2067.517) -- 0:08:15
430000 -- (-2075.489) [-2056.697] (-2075.714) (-2077.712) * (-2058.133) (-2064.263) (-2077.387) [-2064.288] -- 0:08:14
Average standard deviation of split frequencies: 0.010001
431000 -- (-2073.611) (-2061.493) (-2072.839) [-2064.523] * (-2068.525) [-2054.578] (-2095.984) (-2064.164) -- 0:08:13
432000 -- (-2075.382) (-2064.661) [-2054.096] (-2077.720) * (-2070.260) (-2054.016) [-2059.560] (-2077.475) -- 0:08:13
433000 -- (-2062.426) [-2060.099] (-2061.486) (-2077.145) * [-2064.025] (-2075.119) (-2075.940) (-2066.992) -- 0:08:12
434000 -- [-2070.096] (-2076.183) (-2064.628) (-2074.708) * [-2063.583] (-2067.268) (-2063.369) (-2073.881) -- 0:08:11
435000 -- [-2058.914] (-2066.738) (-2073.152) (-2061.185) * (-2076.053) [-2052.493] (-2066.652) (-2063.274) -- 0:08:09
Average standard deviation of split frequencies: 0.010370
436000 -- (-2054.352) (-2070.219) (-2089.080) [-2057.942] * [-2060.825] (-2070.656) (-2073.156) (-2073.208) -- 0:08:08
437000 -- [-2050.421] (-2081.923) (-2078.800) (-2056.458) * (-2073.574) (-2073.073) [-2067.610] (-2071.244) -- 0:08:08
438000 -- (-2063.011) (-2068.277) [-2053.381] (-2062.218) * (-2077.012) (-2063.545) (-2063.996) [-2053.747] -- 0:08:07
439000 -- (-2074.702) (-2072.899) (-2075.988) [-2051.613] * [-2064.750] (-2065.270) (-2073.394) (-2059.623) -- 0:08:06
440000 -- (-2068.463) [-2066.677] (-2075.103) (-2082.179) * (-2059.526) (-2068.327) [-2062.312] (-2068.120) -- 0:08:06
Average standard deviation of split frequencies: 0.010941
441000 -- (-2076.426) (-2060.419) [-2060.490] (-2083.124) * [-2060.732] (-2070.691) (-2071.917) (-2067.684) -- 0:08:04
442000 -- (-2066.409) (-2057.690) [-2064.414] (-2069.046) * (-2066.474) [-2059.531] (-2079.119) (-2062.510) -- 0:08:03
443000 -- (-2067.713) [-2063.201] (-2057.803) (-2065.801) * (-2081.481) (-2063.017) (-2086.261) [-2057.543] -- 0:08:02
444000 -- (-2074.574) (-2068.920) [-2066.579] (-2077.770) * [-2063.717] (-2061.027) (-2077.540) (-2064.396) -- 0:08:02
445000 -- (-2059.581) (-2069.778) [-2060.382] (-2090.023) * (-2088.962) (-2069.250) (-2082.553) [-2061.725] -- 0:08:01
Average standard deviation of split frequencies: 0.011098
446000 -- (-2077.156) (-2053.551) (-2071.216) [-2067.148] * (-2078.409) [-2066.816] (-2065.268) (-2075.559) -- 0:08:00
447000 -- (-2058.175) (-2058.493) (-2080.708) [-2067.237] * (-2062.235) (-2075.896) [-2055.326] (-2068.253) -- 0:07:58
448000 -- (-2060.935) [-2047.085] (-2071.407) (-2077.643) * (-2070.097) (-2073.152) (-2069.316) [-2056.125] -- 0:07:58
449000 -- (-2060.842) (-2057.649) [-2076.603] (-2071.787) * (-2056.798) (-2070.729) [-2059.881] (-2048.724) -- 0:07:57
450000 -- (-2080.691) (-2060.901) [-2055.283] (-2073.904) * (-2072.298) (-2065.883) (-2073.443) [-2058.736] -- 0:07:56
Average standard deviation of split frequencies: 0.010460
451000 -- (-2074.818) [-2057.769] (-2061.928) (-2067.084) * (-2066.862) [-2073.652] (-2067.929) (-2060.938) -- 0:07:55
452000 -- [-2055.650] (-2067.402) (-2063.081) (-2080.908) * (-2052.505) (-2069.517) (-2072.362) [-2059.589] -- 0:07:55
453000 -- (-2069.815) (-2077.052) (-2063.248) [-2068.224] * (-2055.468) (-2060.333) [-2073.342] (-2066.876) -- 0:07:53
454000 -- (-2066.051) (-2070.002) (-2073.177) [-2058.637] * (-2067.186) (-2075.722) [-2070.700] (-2074.960) -- 0:07:52
455000 -- (-2075.147) [-2066.670] (-2061.828) (-2060.017) * (-2071.713) (-2078.210) [-2061.438] (-2061.014) -- 0:07:51
Average standard deviation of split frequencies: 0.010103
456000 -- (-2070.790) [-2064.464] (-2063.551) (-2063.751) * [-2057.112] (-2065.677) (-2085.146) (-2085.823) -- 0:07:51
457000 -- (-2069.284) (-2068.562) (-2074.019) [-2063.084] * (-2059.779) [-2064.178] (-2065.229) (-2078.986) -- 0:07:50
458000 -- (-2061.760) (-2064.865) (-2071.632) [-2058.934] * (-2060.141) [-2066.799] (-2078.307) (-2071.062) -- 0:07:49
459000 -- (-2062.159) (-2072.695) (-2088.462) [-2052.999] * [-2051.876] (-2063.425) (-2070.834) (-2067.778) -- 0:07:49
460000 -- (-2055.751) (-2057.925) (-2081.801) [-2066.148] * [-2053.583] (-2063.644) (-2071.537) (-2069.732) -- 0:07:47
Average standard deviation of split frequencies: 0.010373
461000 -- (-2077.786) (-2060.328) (-2059.981) [-2069.490] * (-2064.825) [-2056.795] (-2067.377) (-2064.238) -- 0:07:46
462000 -- (-2057.658) (-2072.877) [-2067.137] (-2080.143) * (-2068.476) [-2060.555] (-2053.025) (-2071.704) -- 0:07:45
463000 -- (-2070.936) (-2075.687) [-2056.433] (-2078.058) * (-2082.241) (-2069.167) (-2081.602) [-2059.599] -- 0:07:45
464000 -- [-2070.383] (-2070.612) (-2068.061) (-2070.038) * (-2061.516) (-2072.024) (-2058.704) [-2063.801] -- 0:07:44
465000 -- (-2073.483) [-2059.975] (-2058.902) (-2072.369) * (-2070.100) (-2083.909) [-2059.607] (-2070.442) -- 0:07:43
Average standard deviation of split frequencies: 0.009840
466000 -- (-2077.159) [-2059.984] (-2075.612) (-2066.929) * (-2080.452) (-2086.354) (-2059.540) [-2055.750] -- 0:07:42
467000 -- (-2066.884) (-2058.143) [-2076.387] (-2075.520) * (-2061.065) (-2065.251) (-2058.620) [-2052.497] -- 0:07:42
468000 -- (-2064.052) [-2067.068] (-2065.500) (-2080.861) * (-2071.568) (-2062.039) [-2061.582] (-2071.444) -- 0:07:40
469000 -- (-2065.458) (-2063.215) [-2058.478] (-2059.053) * [-2061.772] (-2064.171) (-2071.304) (-2069.898) -- 0:07:39
470000 -- (-2081.062) (-2079.147) [-2053.326] (-2074.673) * (-2057.238) (-2060.544) (-2083.658) [-2059.906] -- 0:07:38
Average standard deviation of split frequencies: 0.009242
471000 -- (-2074.299) (-2087.653) [-2047.549] (-2062.081) * (-2060.439) (-2051.975) [-2069.294] (-2058.981) -- 0:07:38
472000 -- (-2069.290) [-2063.638] (-2061.996) (-2076.203) * (-2065.853) [-2059.419] (-2079.471) (-2056.572) -- 0:07:37
473000 -- (-2059.315) [-2056.468] (-2068.141) (-2058.625) * (-2062.755) (-2048.728) (-2095.490) [-2065.511] -- 0:07:36
474000 -- [-2063.024] (-2050.463) (-2069.919) (-2061.313) * (-2067.391) (-2064.202) (-2069.801) [-2062.015] -- 0:07:36
475000 -- [-2069.587] (-2067.527) (-2072.682) (-2058.407) * (-2063.130) [-2059.889] (-2061.120) (-2062.536) -- 0:07:35
Average standard deviation of split frequencies: 0.008733
476000 -- [-2057.992] (-2070.955) (-2060.548) (-2072.883) * (-2055.692) [-2069.528] (-2075.046) (-2061.414) -- 0:07:34
477000 -- (-2069.820) [-2069.929] (-2056.674) (-2073.302) * (-2069.850) (-2060.258) (-2082.712) [-2055.781] -- 0:07:33
478000 -- (-2057.486) [-2057.332] (-2066.285) (-2066.357) * [-2063.790] (-2057.269) (-2084.988) (-2064.331) -- 0:07:32
479000 -- [-2060.334] (-2060.191) (-2067.845) (-2073.048) * (-2074.376) (-2080.862) (-2067.477) [-2060.359] -- 0:07:31
480000 -- (-2057.572) (-2067.630) (-2070.059) [-2058.202] * (-2078.278) (-2074.882) (-2064.834) [-2064.581] -- 0:07:30
Average standard deviation of split frequencies: 0.009406
481000 -- (-2066.789) (-2082.987) [-2065.259] (-2080.759) * (-2060.033) (-2071.665) (-2076.068) [-2071.410] -- 0:07:29
482000 -- (-2066.445) (-2083.377) (-2079.192) [-2066.377] * (-2063.906) [-2058.842] (-2067.948) (-2082.188) -- 0:07:29
483000 -- (-2077.736) (-2079.045) (-2067.806) [-2062.716] * [-2056.521] (-2085.810) (-2061.741) (-2078.109) -- 0:07:28
484000 -- (-2067.544) (-2059.611) [-2062.377] (-2070.456) * (-2071.598) [-2058.241] (-2067.983) (-2063.737) -- 0:07:27
485000 -- (-2075.513) (-2056.408) [-2061.873] (-2078.336) * [-2063.947] (-2070.024) (-2063.404) (-2075.468) -- 0:07:27
Average standard deviation of split frequencies: 0.009435
486000 -- [-2061.894] (-2068.833) (-2072.473) (-2065.498) * (-2079.543) (-2068.387) (-2088.530) [-2065.328] -- 0:07:25
487000 -- (-2071.136) (-2062.837) (-2073.320) [-2068.057] * (-2066.997) (-2071.613) (-2073.644) [-2059.117] -- 0:07:24
488000 -- (-2076.136) [-2051.818] (-2085.378) (-2075.603) * (-2077.847) (-2072.044) (-2056.837) [-2068.933] -- 0:07:23
489000 -- (-2061.034) (-2057.542) (-2062.958) [-2069.591] * (-2080.263) (-2070.708) (-2057.684) [-2066.496] -- 0:07:23
490000 -- (-2063.069) [-2066.157] (-2064.438) (-2072.561) * (-2083.185) (-2076.744) [-2061.099] (-2065.265) -- 0:07:22
Average standard deviation of split frequencies: 0.008778
491000 -- (-2066.426) (-2056.241) (-2061.608) [-2068.352] * (-2080.955) (-2070.369) (-2068.330) [-2055.036] -- 0:07:21
492000 -- (-2085.121) (-2075.271) [-2071.958] (-2051.505) * (-2082.122) (-2057.600) (-2067.988) [-2059.088] -- 0:07:20
493000 -- (-2065.797) [-2076.530] (-2084.134) (-2073.550) * [-2066.949] (-2062.807) (-2069.444) (-2059.247) -- 0:07:20
494000 -- [-2066.448] (-2062.737) (-2063.378) (-2058.707) * [-2068.423] (-2060.868) (-2064.088) (-2073.442) -- 0:07:18
495000 -- [-2073.647] (-2061.201) (-2071.339) (-2071.022) * (-2067.778) (-2072.416) (-2063.358) [-2051.712] -- 0:07:17
Average standard deviation of split frequencies: 0.008640
496000 -- [-2057.291] (-2056.578) (-2080.663) (-2069.469) * (-2074.136) (-2068.059) [-2060.524] (-2058.197) -- 0:07:16
497000 -- [-2063.288] (-2067.867) (-2088.234) (-2065.374) * (-2054.624) (-2078.349) [-2063.972] (-2073.337) -- 0:07:16
498000 -- (-2065.827) (-2065.313) (-2066.805) [-2057.605] * (-2062.432) [-2071.112] (-2075.265) (-2059.763) -- 0:07:15
499000 -- [-2054.731] (-2063.883) (-2067.725) (-2071.352) * (-2064.287) (-2065.485) [-2070.971] (-2074.787) -- 0:07:14
500000 -- [-2054.756] (-2067.693) (-2074.388) (-2069.941) * [-2063.196] (-2069.964) (-2079.866) (-2066.993) -- 0:07:14
Average standard deviation of split frequencies: 0.008602
501000 -- (-2060.085) (-2065.766) [-2066.199] (-2067.034) * [-2051.141] (-2071.789) (-2085.297) (-2062.655) -- 0:07:13
502000 -- (-2058.880) [-2061.184] (-2081.637) (-2076.042) * [-2054.342] (-2063.052) (-2072.703) (-2064.739) -- 0:07:12
503000 -- (-2059.299) (-2064.942) [-2053.273] (-2073.483) * [-2052.595] (-2069.599) (-2064.081) (-2070.261) -- 0:07:10
504000 -- (-2057.564) (-2067.706) [-2047.658] (-2065.929) * (-2071.449) (-2063.612) [-2041.400] (-2070.233) -- 0:07:10
505000 -- (-2062.861) (-2068.518) [-2049.089] (-2078.881) * (-2057.477) [-2053.296] (-2067.572) (-2071.813) -- 0:07:09
Average standard deviation of split frequencies: 0.007834
506000 -- (-2069.459) [-2072.370] (-2071.158) (-2069.072) * [-2064.803] (-2064.515) (-2057.830) (-2080.235) -- 0:07:08
507000 -- [-2061.378] (-2078.751) (-2070.188) (-2066.406) * [-2060.999] (-2082.707) (-2065.150) (-2066.488) -- 0:07:07
508000 -- [-2053.520] (-2056.829) (-2073.656) (-2070.115) * (-2057.320) [-2053.280] (-2066.092) (-2056.777) -- 0:07:07
509000 -- (-2072.368) [-2056.672] (-2069.668) (-2066.834) * (-2071.977) [-2052.234] (-2068.647) (-2075.412) -- 0:07:06
510000 -- (-2083.101) (-2068.265) (-2062.660) [-2055.646] * (-2085.068) (-2064.448) [-2046.773] (-2075.190) -- 0:07:04
Average standard deviation of split frequencies: 0.008266
511000 -- (-2062.615) (-2069.170) [-2066.775] (-2081.344) * (-2058.925) (-2066.127) [-2060.313] (-2058.551) -- 0:07:03
512000 -- (-2059.097) (-2066.898) (-2073.252) [-2060.469] * (-2062.921) (-2077.377) (-2073.232) [-2062.588] -- 0:07:03
513000 -- (-2065.494) [-2061.288] (-2082.690) (-2065.048) * [-2056.300] (-2068.159) (-2062.501) (-2054.984) -- 0:07:02
514000 -- (-2071.921) (-2052.138) [-2056.847] (-2065.732) * (-2061.260) [-2063.249] (-2064.460) (-2062.423) -- 0:07:01
515000 -- (-2070.244) (-2075.346) [-2062.320] (-2076.775) * (-2069.438) (-2061.985) [-2065.001] (-2072.479) -- 0:07:00
Average standard deviation of split frequencies: 0.008596
516000 -- (-2070.943) (-2065.857) [-2050.031] (-2067.730) * (-2078.059) (-2068.789) [-2072.154] (-2070.991) -- 0:07:00
517000 -- [-2069.003] (-2068.564) (-2055.195) (-2074.389) * (-2064.511) (-2070.491) (-2074.132) [-2050.817] -- 0:06:58
518000 -- [-2056.840] (-2065.015) (-2076.840) (-2064.090) * (-2064.922) (-2064.565) (-2076.367) [-2058.432] -- 0:06:57
519000 -- [-2061.348] (-2056.688) (-2074.131) (-2061.459) * (-2067.136) (-2062.783) (-2074.676) [-2061.445] -- 0:06:57
520000 -- [-2064.636] (-2072.710) (-2074.106) (-2068.163) * (-2059.502) (-2061.978) [-2054.277] (-2060.491) -- 0:06:56
Average standard deviation of split frequencies: 0.008478
521000 -- (-2066.278) (-2074.479) (-2058.738) [-2059.536] * (-2068.748) [-2066.204] (-2067.317) (-2061.058) -- 0:06:55
522000 -- [-2065.436] (-2068.896) (-2080.347) (-2063.807) * [-2074.510] (-2065.338) (-2054.575) (-2085.878) -- 0:06:54
523000 -- (-2065.845) (-2069.141) (-2060.042) [-2055.619] * (-2060.607) [-2056.653] (-2054.137) (-2071.679) -- 0:06:54
524000 -- [-2068.619] (-2075.194) (-2068.011) (-2063.555) * (-2066.237) (-2071.978) [-2057.374] (-2069.472) -- 0:06:53
525000 -- (-2061.174) [-2070.690] (-2058.152) (-2073.678) * [-2057.454] (-2083.025) (-2061.331) (-2065.530) -- 0:06:51
Average standard deviation of split frequencies: 0.008677
526000 -- (-2077.842) [-2059.788] (-2074.876) (-2068.965) * [-2060.874] (-2061.348) (-2064.098) (-2067.725) -- 0:06:50
527000 -- (-2080.147) (-2070.833) (-2059.603) [-2054.455] * (-2064.413) [-2059.737] (-2078.726) (-2061.276) -- 0:06:50
528000 -- (-2080.699) [-2050.383] (-2068.640) (-2055.766) * [-2054.179] (-2083.522) (-2058.756) (-2063.102) -- 0:06:49
529000 -- (-2058.604) [-2059.871] (-2059.153) (-2079.603) * (-2068.376) (-2085.700) (-2078.694) [-2066.826] -- 0:06:48
530000 -- (-2070.701) (-2074.787) (-2060.578) [-2058.669] * (-2057.662) (-2063.649) [-2056.764] (-2066.752) -- 0:06:47
Average standard deviation of split frequencies: 0.009287
531000 -- (-2066.722) (-2079.815) (-2083.502) [-2065.360] * [-2061.949] (-2064.391) (-2065.716) (-2072.280) -- 0:06:47
532000 -- (-2066.190) (-2085.869) (-2059.737) [-2056.170] * (-2071.398) [-2057.084] (-2083.617) (-2058.221) -- 0:06:45
533000 -- [-2056.769] (-2067.294) (-2070.071) (-2064.899) * (-2066.910) [-2054.976] (-2062.778) (-2070.046) -- 0:06:44
534000 -- (-2073.264) [-2066.026] (-2067.851) (-2057.147) * (-2079.961) (-2066.073) (-2070.386) [-2061.107] -- 0:06:44
535000 -- (-2064.731) (-2058.654) (-2075.788) [-2048.920] * (-2072.863) (-2065.343) (-2070.682) [-2069.892] -- 0:06:43
Average standard deviation of split frequencies: 0.008435
536000 -- (-2069.711) [-2065.220] (-2064.816) (-2070.048) * [-2062.427] (-2061.050) (-2082.804) (-2070.331) -- 0:06:42
537000 -- (-2073.773) (-2066.761) [-2067.682] (-2065.733) * (-2070.114) (-2068.083) [-2056.612] (-2055.706) -- 0:06:41
538000 -- (-2067.564) (-2069.241) [-2056.641] (-2075.291) * (-2066.889) (-2070.564) (-2064.935) [-2062.498] -- 0:06:41
539000 -- (-2058.708) (-2069.249) (-2056.689) [-2055.512] * (-2080.502) (-2067.876) [-2064.920] (-2065.634) -- 0:06:40
540000 -- (-2059.555) (-2073.758) (-2065.945) [-2057.473] * (-2064.745) (-2072.392) [-2066.929] (-2077.274) -- 0:06:38
Average standard deviation of split frequencies: 0.008442
541000 -- [-2068.246] (-2074.765) (-2063.966) (-2066.576) * [-2056.924] (-2057.887) (-2081.455) (-2071.584) -- 0:06:37
542000 -- [-2057.446] (-2076.585) (-2067.657) (-2072.774) * [-2046.951] (-2057.707) (-2064.843) (-2060.719) -- 0:06:37
543000 -- (-2070.102) [-2052.828] (-2077.154) (-2068.833) * [-2052.227] (-2068.484) (-2077.839) (-2065.257) -- 0:06:36
544000 -- (-2065.429) (-2065.305) [-2057.599] (-2072.399) * (-2062.299) (-2076.559) [-2061.637] (-2077.230) -- 0:06:35
545000 -- (-2070.683) (-2062.783) [-2056.270] (-2070.301) * [-2054.762] (-2083.798) (-2062.664) (-2064.378) -- 0:06:34
Average standard deviation of split frequencies: 0.008752
546000 -- (-2056.257) (-2066.712) [-2053.687] (-2064.932) * (-2076.496) (-2073.450) [-2052.853] (-2093.458) -- 0:06:34
547000 -- (-2068.201) (-2074.989) (-2066.657) [-2051.316] * (-2070.631) (-2068.423) [-2060.621] (-2078.303) -- 0:06:32
548000 -- (-2062.921) [-2069.524] (-2067.306) (-2064.117) * (-2058.423) (-2080.703) [-2063.223] (-2070.702) -- 0:06:31
549000 -- (-2059.872) (-2064.978) [-2052.577] (-2067.263) * (-2074.729) (-2060.818) (-2070.110) [-2054.166] -- 0:06:31
550000 -- [-2060.779] (-2078.306) (-2069.020) (-2088.340) * (-2077.902) (-2064.913) (-2071.083) [-2062.536] -- 0:06:30
Average standard deviation of split frequencies: 0.008366
551000 -- (-2071.491) (-2063.936) [-2057.984] (-2073.211) * (-2068.424) (-2068.454) [-2057.746] (-2085.237) -- 0:06:29
552000 -- (-2063.393) (-2074.453) [-2062.753] (-2068.481) * (-2061.169) (-2092.017) [-2051.813] (-2065.671) -- 0:06:28
553000 -- (-2072.345) (-2066.778) [-2053.593] (-2057.435) * (-2068.147) (-2078.288) [-2058.239] (-2065.118) -- 0:06:27
554000 -- (-2077.518) (-2063.442) [-2061.848] (-2074.577) * (-2095.227) (-2059.415) (-2062.044) [-2065.202] -- 0:06:26
555000 -- (-2075.370) (-2059.430) (-2058.585) [-2054.914] * (-2061.097) [-2047.188] (-2068.787) (-2070.239) -- 0:06:25
Average standard deviation of split frequencies: 0.009172
556000 -- (-2067.427) (-2058.085) (-2065.452) [-2056.127] * [-2056.787] (-2077.212) (-2072.401) (-2071.298) -- 0:06:24
557000 -- [-2049.363] (-2058.528) (-2058.599) (-2056.510) * (-2062.739) (-2060.286) [-2059.830] (-2069.429) -- 0:06:24
558000 -- (-2068.044) (-2061.922) [-2062.818] (-2068.513) * (-2053.437) (-2062.325) (-2073.673) [-2048.141] -- 0:06:23
559000 -- (-2072.179) (-2065.923) (-2069.189) [-2065.845] * (-2057.354) [-2054.709] (-2084.977) (-2071.431) -- 0:06:22
560000 -- (-2084.269) (-2073.450) [-2059.645] (-2070.282) * [-2053.754] (-2077.957) (-2051.545) (-2056.773) -- 0:06:21
Average standard deviation of split frequencies: 0.009249
561000 -- (-2057.205) [-2072.082] (-2076.492) (-2064.776) * (-2063.482) (-2060.784) [-2078.423] (-2070.850) -- 0:06:20
562000 -- (-2073.862) (-2062.590) (-2099.163) [-2060.845] * (-2057.991) (-2067.583) [-2070.383] (-2068.652) -- 0:06:19
563000 -- (-2068.963) [-2058.354] (-2075.659) (-2054.044) * (-2068.238) (-2077.234) (-2071.046) [-2068.996] -- 0:06:18
564000 -- [-2062.259] (-2063.818) (-2072.596) (-2052.986) * (-2068.290) (-2058.716) [-2054.980] (-2080.211) -- 0:06:18
565000 -- (-2069.838) (-2083.728) (-2085.533) [-2066.901] * (-2068.755) (-2062.850) [-2048.618] (-2076.305) -- 0:06:17
Average standard deviation of split frequencies: 0.008404
566000 -- (-2070.351) [-2062.786] (-2067.578) (-2067.910) * [-2061.239] (-2071.654) (-2069.256) (-2076.264) -- 0:06:16
567000 -- [-2059.611] (-2078.309) (-2062.952) (-2076.044) * (-2054.813) (-2070.496) (-2054.497) [-2052.042] -- 0:06:15
568000 -- [-2063.644] (-2073.087) (-2048.955) (-2061.134) * (-2068.287) (-2057.091) [-2058.686] (-2078.149) -- 0:06:14
569000 -- (-2057.838) (-2066.188) (-2058.271) [-2063.401] * (-2069.475) (-2065.363) (-2091.782) [-2056.845] -- 0:06:13
570000 -- (-2061.410) (-2057.807) [-2066.760] (-2073.549) * (-2064.381) (-2070.655) (-2074.893) [-2065.015] -- 0:06:12
Average standard deviation of split frequencies: 0.008110
571000 -- [-2061.127] (-2062.675) (-2064.360) (-2075.560) * (-2057.731) [-2059.849] (-2069.026) (-2058.880) -- 0:06:11
572000 -- (-2061.638) [-2065.367] (-2085.217) (-2061.274) * (-2056.413) [-2058.870] (-2076.871) (-2075.908) -- 0:06:11
573000 -- (-2073.638) (-2062.931) [-2054.794] (-2056.791) * (-2057.105) (-2067.531) (-2072.148) [-2064.676] -- 0:06:10
574000 -- (-2070.769) (-2056.240) [-2058.869] (-2074.072) * (-2083.158) (-2063.370) [-2062.761] (-2052.035) -- 0:06:09
575000 -- (-2072.790) (-2067.126) [-2058.673] (-2086.963) * [-2059.880] (-2066.736) (-2077.261) (-2071.144) -- 0:06:08
Average standard deviation of split frequencies: 0.007552
576000 -- (-2056.813) [-2073.582] (-2061.395) (-2061.873) * (-2077.661) [-2071.024] (-2074.239) (-2060.388) -- 0:06:07
577000 -- (-2059.331) (-2065.515) [-2061.318] (-2059.737) * (-2065.627) (-2071.181) [-2063.885] (-2061.248) -- 0:06:06
578000 -- [-2057.232] (-2076.541) (-2088.075) (-2068.197) * (-2092.398) (-2071.409) [-2073.774] (-2080.641) -- 0:06:05
579000 -- [-2066.401] (-2080.866) (-2076.405) (-2064.109) * [-2058.995] (-2061.082) (-2078.329) (-2064.299) -- 0:06:05
580000 -- (-2097.800) (-2077.163) [-2047.845] (-2054.743) * (-2059.628) [-2058.786] (-2058.788) (-2080.349) -- 0:06:04
Average standard deviation of split frequencies: 0.007196
581000 -- (-2065.253) [-2057.883] (-2052.620) (-2074.643) * (-2068.125) (-2058.148) [-2044.990] (-2061.741) -- 0:06:03
582000 -- [-2066.962] (-2066.494) (-2061.848) (-2068.997) * (-2073.391) [-2065.663] (-2065.949) (-2067.899) -- 0:06:02
583000 -- (-2069.666) [-2070.806] (-2058.464) (-2082.875) * (-2063.988) (-2062.065) (-2071.383) [-2059.871] -- 0:06:01
584000 -- (-2066.115) [-2061.460] (-2086.000) (-2073.621) * (-2059.632) [-2059.233] (-2079.391) (-2069.608) -- 0:06:00
585000 -- (-2053.932) (-2076.047) (-2072.857) [-2060.403] * [-2062.132] (-2063.878) (-2074.291) (-2078.922) -- 0:05:59
Average standard deviation of split frequencies: 0.007240
586000 -- (-2072.016) (-2059.423) (-2057.703) [-2057.894] * (-2079.900) [-2058.345] (-2059.757) (-2076.450) -- 0:05:58
587000 -- (-2076.966) [-2051.919] (-2067.411) (-2076.272) * [-2071.236] (-2060.752) (-2074.296) (-2063.376) -- 0:05:58
588000 -- (-2079.561) (-2069.967) [-2057.647] (-2057.569) * [-2060.271] (-2062.860) (-2060.137) (-2066.030) -- 0:05:57
589000 -- (-2075.525) [-2053.223] (-2054.924) (-2061.846) * [-2065.464] (-2067.228) (-2073.431) (-2079.091) -- 0:05:56
590000 -- (-2063.384) [-2054.588] (-2052.662) (-2059.676) * (-2065.493) [-2066.934] (-2080.488) (-2085.586) -- 0:05:55
Average standard deviation of split frequencies: 0.006530
591000 -- (-2065.617) (-2072.032) [-2061.724] (-2076.541) * (-2077.178) [-2055.156] (-2074.953) (-2063.881) -- 0:05:54
592000 -- [-2065.953] (-2085.389) (-2059.707) (-2064.691) * (-2075.899) (-2077.559) (-2070.230) [-2048.621] -- 0:05:53
593000 -- (-2057.999) (-2075.184) (-2064.649) [-2068.422] * (-2071.954) [-2058.593] (-2071.922) (-2062.382) -- 0:05:52
594000 -- (-2062.130) (-2073.123) [-2064.232] (-2061.380) * (-2067.682) [-2062.535] (-2074.394) (-2067.555) -- 0:05:52
595000 -- [-2068.989] (-2067.211) (-2069.372) (-2050.690) * (-2061.143) [-2062.267] (-2063.928) (-2073.674) -- 0:05:51
Average standard deviation of split frequencies: 0.007011
596000 -- (-2069.978) (-2076.276) (-2077.395) [-2061.157] * (-2067.783) (-2074.698) (-2063.512) [-2053.920] -- 0:05:50
597000 -- (-2057.271) [-2059.589] (-2061.421) (-2066.948) * (-2066.202) (-2066.183) (-2061.827) [-2057.656] -- 0:05:49
598000 -- [-2062.177] (-2057.809) (-2068.770) (-2063.821) * (-2064.878) (-2060.810) [-2052.599] (-2060.573) -- 0:05:48
599000 -- [-2058.946] (-2059.305) (-2067.057) (-2061.609) * (-2068.450) [-2066.158] (-2058.887) (-2058.526) -- 0:05:47
600000 -- [-2069.105] (-2073.748) (-2069.789) (-2064.371) * [-2052.023] (-2077.940) (-2056.998) (-2064.021) -- 0:05:46
Average standard deviation of split frequencies: 0.006171
601000 -- [-2053.793] (-2058.647) (-2059.699) (-2068.383) * (-2063.291) (-2074.372) [-2058.381] (-2072.174) -- 0:05:45
602000 -- (-2069.693) (-2062.504) (-2068.307) [-2065.164] * (-2064.882) (-2066.257) (-2058.760) [-2067.310] -- 0:05:45
603000 -- [-2064.749] (-2077.001) (-2067.591) (-2063.890) * (-2079.441) (-2053.551) [-2057.314] (-2071.191) -- 0:05:44
604000 -- (-2064.668) [-2055.736] (-2091.723) (-2073.713) * (-2070.382) (-2061.350) (-2060.460) [-2067.125] -- 0:05:43
605000 -- (-2067.693) (-2063.314) [-2070.035] (-2060.625) * (-2063.552) [-2059.112] (-2070.588) (-2085.002) -- 0:05:42
Average standard deviation of split frequencies: 0.006577
606000 -- (-2065.464) [-2060.401] (-2068.667) (-2077.882) * (-2073.571) (-2082.795) (-2068.052) [-2058.399] -- 0:05:41
607000 -- (-2071.859) (-2070.556) (-2069.627) [-2073.323] * (-2067.385) [-2053.685] (-2071.345) (-2076.236) -- 0:05:41
608000 -- (-2062.339) [-2059.684] (-2054.739) (-2064.630) * (-2068.239) [-2068.505] (-2084.212) (-2053.970) -- 0:05:40
609000 -- (-2072.530) (-2065.636) (-2066.699) [-2049.953] * (-2066.348) [-2061.312] (-2061.386) (-2075.957) -- 0:05:38
610000 -- (-2062.009) (-2060.150) [-2062.221] (-2062.609) * [-2062.451] (-2070.532) (-2067.087) (-2064.763) -- 0:05:38
Average standard deviation of split frequencies: 0.006281
611000 -- (-2071.699) (-2078.281) [-2054.063] (-2065.875) * (-2075.287) [-2054.761] (-2073.371) (-2070.422) -- 0:05:37
612000 -- (-2059.896) (-2067.695) [-2049.926] (-2064.269) * (-2064.252) (-2075.496) (-2069.474) [-2058.023] -- 0:05:36
613000 -- (-2086.906) [-2056.391] (-2066.230) (-2064.456) * (-2070.527) (-2064.637) [-2070.190] (-2068.688) -- 0:05:35
614000 -- (-2059.362) [-2060.506] (-2069.240) (-2068.276) * (-2085.167) [-2054.185] (-2080.073) (-2076.221) -- 0:05:35
615000 -- [-2068.462] (-2065.780) (-2067.074) (-2063.381) * (-2060.903) [-2052.885] (-2065.736) (-2066.125) -- 0:05:34
Average standard deviation of split frequencies: 0.005948
616000 -- (-2062.672) [-2067.891] (-2070.258) (-2061.660) * [-2072.706] (-2080.338) (-2080.182) (-2064.046) -- 0:05:32
617000 -- (-2069.613) [-2064.325] (-2073.929) (-2066.338) * [-2051.961] (-2081.123) (-2085.109) (-2073.660) -- 0:05:32
618000 -- [-2059.074] (-2063.835) (-2072.538) (-2060.678) * [-2051.983] (-2054.467) (-2072.396) (-2066.987) -- 0:05:31
619000 -- (-2063.017) (-2065.042) (-2070.556) [-2052.471] * [-2062.363] (-2052.354) (-2073.786) (-2062.305) -- 0:05:30
620000 -- (-2070.166) (-2071.058) (-2083.604) [-2059.624] * (-2075.664) (-2058.631) (-2064.890) [-2064.420] -- 0:05:29
Average standard deviation of split frequencies: 0.006628
621000 -- (-2067.494) [-2068.814] (-2070.926) (-2074.644) * (-2075.977) [-2049.896] (-2067.217) (-2067.505) -- 0:05:28
622000 -- (-2069.035) (-2058.941) (-2060.778) [-2059.384] * (-2054.815) [-2058.410] (-2073.286) (-2071.603) -- 0:05:28
623000 -- (-2062.514) [-2063.352] (-2062.024) (-2077.499) * (-2061.153) (-2068.337) (-2063.591) [-2055.466] -- 0:05:26
624000 -- (-2059.991) (-2064.677) [-2053.163] (-2066.445) * (-2070.119) [-2057.289] (-2064.321) (-2073.959) -- 0:05:25
625000 -- (-2081.322) (-2064.533) (-2072.017) [-2055.291] * (-2078.131) (-2064.185) [-2058.147] (-2065.486) -- 0:05:25
Average standard deviation of split frequencies: 0.007188
626000 -- [-2061.828] (-2082.036) (-2067.757) (-2069.958) * (-2102.126) (-2059.945) (-2052.540) [-2059.095] -- 0:05:24
627000 -- (-2068.718) (-2074.569) [-2059.581] (-2090.113) * [-2068.232] (-2063.971) (-2077.197) (-2058.530) -- 0:05:23
628000 -- [-2061.390] (-2060.754) (-2065.057) (-2091.296) * (-2060.539) (-2067.128) (-2068.230) [-2062.940] -- 0:05:22
629000 -- (-2063.310) [-2080.076] (-2068.027) (-2082.001) * (-2067.685) (-2057.708) (-2069.600) [-2055.338] -- 0:05:22
630000 -- (-2062.680) (-2076.751) [-2068.684] (-2068.015) * (-2081.523) [-2062.620] (-2077.864) (-2060.471) -- 0:05:21
Average standard deviation of split frequencies: 0.006897
631000 -- (-2082.085) (-2076.074) (-2050.373) [-2063.546] * (-2056.323) (-2094.336) (-2072.705) [-2047.566] -- 0:05:19
632000 -- (-2080.045) (-2072.481) [-2057.699] (-2061.997) * (-2061.726) (-2090.939) [-2059.247] (-2075.207) -- 0:05:19
633000 -- (-2051.530) (-2074.612) [-2065.946] (-2072.191) * (-2065.758) [-2065.488] (-2075.738) (-2076.788) -- 0:05:18
634000 -- (-2058.417) (-2070.927) (-2077.240) [-2060.791] * (-2074.150) (-2057.569) (-2077.803) [-2063.127] -- 0:05:17
635000 -- (-2066.584) [-2059.324] (-2066.954) (-2073.559) * (-2081.096) (-2073.506) [-2073.583] (-2068.325) -- 0:05:16
Average standard deviation of split frequencies: 0.007075
636000 -- (-2063.843) [-2060.069] (-2070.214) (-2068.556) * (-2068.864) (-2060.802) (-2065.188) [-2062.320] -- 0:05:15
637000 -- [-2060.024] (-2069.056) (-2053.671) (-2072.527) * (-2060.707) (-2074.589) [-2054.777] (-2074.849) -- 0:05:14
638000 -- (-2068.649) (-2063.290) (-2074.750) [-2059.876] * (-2063.002) (-2061.870) [-2055.119] (-2074.411) -- 0:05:13
639000 -- (-2055.387) (-2062.781) [-2064.528] (-2067.146) * (-2068.235) (-2083.023) [-2058.037] (-2052.616) -- 0:05:12
640000 -- [-2068.699] (-2058.399) (-2074.918) (-2062.273) * (-2076.412) (-2063.533) [-2062.723] (-2066.911) -- 0:05:12
Average standard deviation of split frequencies: 0.006923
641000 -- (-2067.316) (-2056.768) [-2057.686] (-2071.846) * (-2065.419) [-2062.308] (-2065.932) (-2064.942) -- 0:05:11
642000 -- (-2084.459) [-2060.075] (-2053.025) (-2068.655) * (-2071.465) (-2050.417) (-2077.398) [-2058.240] -- 0:05:10
643000 -- (-2087.819) [-2069.459] (-2068.892) (-2069.982) * (-2072.487) (-2061.305) (-2068.717) [-2064.591] -- 0:05:09
644000 -- [-2058.244] (-2060.228) (-2059.362) (-2054.617) * (-2063.174) (-2080.782) (-2073.686) [-2057.347] -- 0:05:09
645000 -- [-2060.744] (-2070.974) (-2061.179) (-2072.378) * (-2064.177) (-2067.187) (-2057.873) [-2067.291] -- 0:05:08
Average standard deviation of split frequencies: 0.006999
646000 -- (-2057.756) (-2075.347) (-2076.160) [-2055.671] * (-2065.340) (-2070.137) [-2044.954] (-2069.504) -- 0:05:06
647000 -- (-2060.349) [-2070.286] (-2085.819) (-2072.620) * (-2075.490) (-2056.364) [-2052.578] (-2068.530) -- 0:05:06
648000 -- (-2063.883) [-2051.282] (-2072.139) (-2064.044) * (-2063.686) (-2062.607) [-2067.349] (-2067.148) -- 0:05:05
649000 -- (-2070.188) (-2051.348) [-2070.595] (-2072.276) * (-2072.218) (-2064.993) [-2064.190] (-2062.088) -- 0:05:04
650000 -- (-2072.662) (-2067.741) [-2066.119] (-2050.667) * (-2070.024) (-2060.771) [-2067.790] (-2061.158) -- 0:05:03
Average standard deviation of split frequencies: 0.007278
651000 -- [-2057.852] (-2057.174) (-2068.815) (-2078.285) * (-2064.790) (-2067.541) [-2063.850] (-2083.718) -- 0:05:02
652000 -- (-2072.502) [-2054.027] (-2062.402) (-2053.762) * (-2066.619) (-2067.499) [-2057.805] (-2058.637) -- 0:05:02
653000 -- (-2051.209) (-2057.344) [-2061.212] (-2058.702) * (-2078.420) [-2070.429] (-2073.564) (-2063.488) -- 0:05:00
654000 -- (-2072.207) (-2064.353) [-2048.326] (-2075.206) * (-2082.166) (-2077.057) [-2069.867] (-2074.006) -- 0:04:59
655000 -- (-2056.500) (-2064.482) (-2087.121) [-2061.452] * (-2074.159) [-2064.350] (-2073.076) (-2095.658) -- 0:04:59
Average standard deviation of split frequencies: 0.007545
656000 -- (-2084.592) (-2066.759) [-2070.384] (-2056.851) * (-2064.972) (-2066.222) [-2049.264] (-2079.124) -- 0:04:58
657000 -- [-2058.825] (-2065.503) (-2060.979) (-2069.834) * (-2078.553) (-2061.611) (-2069.666) [-2064.683] -- 0:04:57
658000 -- [-2050.019] (-2063.461) (-2078.875) (-2072.035) * [-2059.282] (-2061.617) (-2070.113) (-2061.555) -- 0:04:56
659000 -- [-2061.071] (-2067.911) (-2070.553) (-2064.663) * (-2069.497) [-2052.958] (-2070.657) (-2064.725) -- 0:04:55
660000 -- (-2071.137) (-2051.226) (-2086.388) [-2060.322] * (-2066.464) [-2054.950] (-2064.413) (-2055.306) -- 0:04:54
Average standard deviation of split frequencies: 0.007687
661000 -- [-2059.463] (-2058.650) (-2072.045) (-2048.461) * (-2063.238) (-2065.339) (-2065.737) [-2059.350] -- 0:04:53
662000 -- (-2065.923) (-2061.855) (-2078.844) [-2063.751] * [-2060.420] (-2079.389) (-2076.126) (-2058.525) -- 0:04:53
663000 -- (-2076.941) (-2052.134) (-2077.042) [-2059.702] * (-2074.148) (-2063.851) [-2067.228] (-2069.718) -- 0:04:52
664000 -- (-2070.805) (-2063.693) (-2072.576) [-2056.688] * (-2073.841) (-2069.504) (-2080.390) [-2055.172] -- 0:04:51
665000 -- (-2081.433) (-2064.419) (-2071.072) [-2054.927] * (-2076.216) (-2066.278) (-2065.883) [-2064.820] -- 0:04:50
Average standard deviation of split frequencies: 0.008076
666000 -- (-2073.073) [-2058.839] (-2061.841) (-2078.116) * (-2077.942) [-2058.753] (-2065.005) (-2060.508) -- 0:04:49
667000 -- (-2063.369) [-2067.547] (-2060.625) (-2070.423) * (-2087.171) (-2064.420) [-2069.359] (-2072.800) -- 0:04:48
668000 -- (-2058.607) (-2069.104) (-2065.341) [-2068.190] * (-2068.538) [-2065.714] (-2068.970) (-2070.817) -- 0:04:47
669000 -- (-2066.433) (-2065.905) [-2062.500] (-2072.333) * (-2055.146) [-2048.565] (-2068.293) (-2081.139) -- 0:04:46
670000 -- (-2078.640) (-2065.647) [-2063.618] (-2071.715) * (-2076.953) [-2062.943] (-2062.718) (-2058.040) -- 0:04:46
Average standard deviation of split frequencies: 0.008147
671000 -- (-2063.025) (-2066.890) [-2058.590] (-2074.217) * (-2072.010) [-2063.895] (-2064.317) (-2065.492) -- 0:04:45
672000 -- (-2089.363) (-2063.360) (-2058.857) [-2065.876] * (-2061.834) (-2070.235) (-2074.035) [-2050.525] -- 0:04:44
673000 -- (-2066.686) (-2060.992) (-2052.938) [-2064.317] * (-2078.104) (-2067.139) (-2064.954) [-2057.169] -- 0:04:43
674000 -- (-2063.090) [-2059.543] (-2067.688) (-2064.950) * (-2074.570) (-2069.592) [-2069.512] (-2054.322) -- 0:04:42
675000 -- (-2071.177) (-2072.613) (-2073.331) [-2065.697] * (-2065.721) (-2062.408) [-2064.152] (-2078.055) -- 0:04:41
Average standard deviation of split frequencies: 0.008051
676000 -- (-2076.376) (-2053.858) [-2067.486] (-2071.716) * (-2064.849) [-2052.913] (-2056.645) (-2091.995) -- 0:04:40
677000 -- (-2079.856) (-2068.500) (-2070.574) [-2064.438] * (-2053.523) [-2073.120] (-2081.690) (-2071.687) -- 0:04:40
678000 -- [-2054.980] (-2069.502) (-2066.182) (-2071.605) * (-2071.062) (-2059.862) [-2063.762] (-2054.457) -- 0:04:39
679000 -- (-2076.865) (-2070.495) (-2066.457) [-2057.554] * [-2057.563] (-2069.645) (-2066.729) (-2060.093) -- 0:04:38
680000 -- (-2083.888) (-2062.485) (-2070.709) [-2059.371] * (-2060.990) (-2067.818) (-2064.447) [-2053.211] -- 0:04:37
Average standard deviation of split frequencies: 0.007335
681000 -- (-2068.669) [-2061.678] (-2072.844) (-2069.133) * [-2064.417] (-2078.137) (-2077.102) (-2043.827) -- 0:04:36
682000 -- (-2065.680) (-2063.319) (-2072.701) [-2061.411] * (-2050.536) (-2063.861) (-2060.795) [-2067.772] -- 0:04:36
683000 -- (-2073.549) [-2065.385] (-2087.754) (-2064.857) * (-2078.109) (-2051.843) [-2074.492] (-2081.204) -- 0:04:35
684000 -- [-2056.585] (-2063.186) (-2061.951) (-2061.077) * (-2061.303) (-2061.683) [-2053.365] (-2054.223) -- 0:04:34
685000 -- (-2074.518) (-2075.231) [-2058.912] (-2073.466) * (-2066.677) (-2066.822) [-2077.373] (-2074.545) -- 0:04:33
Average standard deviation of split frequencies: 0.007215
686000 -- (-2080.094) [-2055.350] (-2053.357) (-2066.706) * [-2056.359] (-2053.444) (-2061.854) (-2076.607) -- 0:04:32
687000 -- (-2064.164) (-2076.208) [-2072.565] (-2070.976) * (-2056.033) (-2077.425) (-2078.438) [-2055.370] -- 0:04:31
688000 -- (-2064.407) (-2071.943) [-2066.954] (-2057.788) * (-2072.748) (-2078.273) [-2072.193] (-2063.950) -- 0:04:30
689000 -- [-2067.784] (-2068.628) (-2067.221) (-2074.860) * (-2071.564) (-2069.667) (-2067.471) [-2056.522] -- 0:04:29
690000 -- (-2062.016) (-2066.258) (-2055.185) [-2059.790] * [-2055.175] (-2064.864) (-2062.757) (-2062.255) -- 0:04:29
Average standard deviation of split frequencies: 0.007012
691000 -- (-2068.648) [-2064.177] (-2068.440) (-2069.188) * [-2063.312] (-2066.928) (-2064.689) (-2073.122) -- 0:04:28
692000 -- (-2070.769) (-2079.211) [-2060.126] (-2071.608) * (-2069.369) (-2077.099) (-2061.431) [-2052.872] -- 0:04:27
693000 -- (-2055.034) (-2071.213) (-2071.230) [-2069.619] * (-2062.078) (-2087.303) [-2057.016] (-2061.225) -- 0:04:26
694000 -- (-2060.327) (-2076.465) (-2059.740) [-2055.323] * (-2079.882) (-2075.178) (-2052.000) [-2065.211] -- 0:04:25
695000 -- (-2066.905) (-2080.377) (-2063.484) [-2056.065] * (-2068.251) (-2062.099) (-2063.481) [-2077.362] -- 0:04:24
Average standard deviation of split frequencies: 0.007050
696000 -- [-2056.899] (-2066.678) (-2068.127) (-2064.612) * [-2058.420] (-2064.714) (-2077.271) (-2046.803) -- 0:04:23
697000 -- (-2075.709) (-2058.033) (-2074.468) [-2062.470] * [-2068.062] (-2066.409) (-2067.515) (-2055.001) -- 0:04:23
698000 -- [-2067.460] (-2067.341) (-2076.853) (-2062.185) * (-2048.643) (-2052.197) (-2072.800) [-2054.759] -- 0:04:22
699000 -- (-2065.438) [-2069.050] (-2069.017) (-2067.355) * [-2052.228] (-2064.432) (-2079.305) (-2076.549) -- 0:04:21
700000 -- (-2070.941) (-2071.716) (-2092.512) [-2067.334] * (-2059.351) [-2064.510] (-2086.582) (-2057.932) -- 0:04:20
Average standard deviation of split frequencies: 0.007126
701000 -- (-2066.050) (-2055.030) [-2062.049] (-2066.648) * (-2066.353) [-2057.545] (-2095.928) (-2064.103) -- 0:04:19
702000 -- (-2062.593) (-2063.233) [-2058.859] (-2071.861) * (-2066.284) [-2055.613] (-2097.548) (-2059.510) -- 0:04:18
703000 -- (-2065.209) [-2069.139] (-2066.562) (-2075.095) * (-2075.651) [-2065.700] (-2062.851) (-2063.959) -- 0:04:17
704000 -- (-2059.696) (-2077.306) (-2064.017) [-2068.959] * (-2061.906) [-2056.016] (-2059.691) (-2076.840) -- 0:04:16
705000 -- (-2072.236) (-2072.628) [-2068.317] (-2057.172) * [-2066.291] (-2075.698) (-2066.290) (-2079.994) -- 0:04:16
Average standard deviation of split frequencies: 0.007345
706000 -- [-2055.031] (-2067.746) (-2076.474) (-2051.812) * [-2061.395] (-2075.103) (-2070.086) (-2086.988) -- 0:04:15
707000 -- (-2059.479) (-2069.621) (-2068.110) [-2062.985] * [-2053.385] (-2070.202) (-2066.682) (-2072.553) -- 0:04:14
708000 -- [-2049.387] (-2065.698) (-2066.266) (-2067.460) * [-2062.882] (-2067.515) (-2073.328) (-2064.094) -- 0:04:13
709000 -- [-2066.196] (-2069.824) (-2075.696) (-2071.746) * (-2070.780) (-2081.527) (-2072.342) [-2054.131] -- 0:04:12
710000 -- (-2073.074) (-2071.848) [-2069.446] (-2071.063) * (-2084.056) [-2064.258] (-2074.123) (-2065.032) -- 0:04:11
Average standard deviation of split frequencies: 0.006874
711000 -- (-2076.397) [-2059.643] (-2064.369) (-2066.152) * (-2071.421) (-2067.297) (-2077.067) [-2067.159] -- 0:04:10
712000 -- (-2076.906) [-2062.403] (-2074.652) (-2065.438) * (-2062.544) (-2068.872) [-2063.489] (-2083.350) -- 0:04:09
713000 -- (-2068.306) (-2064.729) (-2070.972) [-2068.937] * [-2053.931] (-2066.543) (-2065.334) (-2079.841) -- 0:04:09
714000 -- (-2079.882) (-2047.535) (-2065.711) [-2050.186] * (-2056.239) (-2067.552) (-2076.554) [-2063.357] -- 0:04:08
715000 -- [-2060.860] (-2065.105) (-2064.453) (-2069.422) * [-2056.969] (-2076.278) (-2073.281) (-2074.455) -- 0:04:07
Average standard deviation of split frequencies: 0.007003
716000 -- (-2078.992) (-2074.472) (-2063.160) [-2055.052] * (-2066.891) (-2063.999) [-2061.834] (-2065.656) -- 0:04:06
717000 -- [-2054.879] (-2076.624) (-2076.782) (-2066.385) * (-2065.402) (-2064.452) (-2069.188) [-2058.089] -- 0:04:05
718000 -- (-2078.503) (-2068.879) [-2057.084] (-2063.368) * (-2066.034) (-2071.831) [-2049.275] (-2074.701) -- 0:04:04
719000 -- (-2069.746) (-2068.572) (-2069.758) [-2060.498] * (-2057.673) [-2060.912] (-2069.882) (-2076.673) -- 0:04:03
720000 -- (-2068.806) (-2069.809) [-2077.082] (-2067.984) * [-2065.091] (-2062.274) (-2068.013) (-2071.844) -- 0:04:03
Average standard deviation of split frequencies: 0.006779
721000 -- (-2072.887) (-2073.238) [-2058.034] (-2062.967) * (-2067.426) (-2077.790) (-2066.363) [-2068.038] -- 0:04:02
722000 -- [-2068.813] (-2071.431) (-2066.638) (-2062.251) * (-2069.696) [-2065.424] (-2063.649) (-2074.250) -- 0:04:01
723000 -- (-2067.339) [-2069.182] (-2082.739) (-2059.352) * (-2067.509) (-2067.750) (-2075.068) [-2066.500] -- 0:04:00
724000 -- (-2072.687) [-2060.998] (-2067.207) (-2073.622) * (-2068.438) [-2067.045] (-2078.955) (-2058.805) -- 0:03:59
725000 -- (-2073.381) (-2055.912) [-2065.400] (-2070.488) * (-2082.856) [-2053.691] (-2070.793) (-2060.755) -- 0:03:58
Average standard deviation of split frequencies: 0.006818
726000 -- [-2056.734] (-2076.905) (-2073.981) (-2067.517) * (-2085.247) [-2061.397] (-2064.371) (-2078.159) -- 0:03:57
727000 -- [-2052.781] (-2070.573) (-2058.846) (-2078.042) * [-2060.299] (-2070.118) (-2074.790) (-2057.178) -- 0:03:56
728000 -- (-2076.738) (-2071.018) (-2068.035) [-2061.461] * (-2068.656) (-2071.045) (-2050.150) [-2060.170] -- 0:03:56
729000 -- [-2067.106] (-2064.343) (-2054.579) (-2075.944) * (-2076.753) (-2073.233) [-2055.815] (-2062.270) -- 0:03:54
730000 -- (-2064.617) [-2065.895] (-2062.535) (-2064.713) * [-2064.302] (-2071.857) (-2063.854) (-2061.923) -- 0:03:54
Average standard deviation of split frequencies: 0.007068
731000 -- (-2068.222) (-2073.634) [-2058.360] (-2069.741) * (-2073.387) (-2077.821) [-2056.574] (-2059.611) -- 0:03:53
732000 -- (-2081.362) (-2071.776) [-2062.475] (-2070.205) * (-2087.691) (-2077.293) [-2057.536] (-2053.661) -- 0:03:52
733000 -- (-2069.489) (-2054.073) [-2058.545] (-2065.623) * [-2057.407] (-2077.541) (-2064.518) (-2065.132) -- 0:03:51
734000 -- (-2077.295) (-2072.733) (-2063.841) [-2051.658] * (-2065.567) (-2074.390) [-2077.500] (-2070.995) -- 0:03:50
735000 -- (-2076.172) [-2094.115] (-2054.100) (-2080.985) * (-2068.956) [-2055.501] (-2079.124) (-2075.724) -- 0:03:50
Average standard deviation of split frequencies: 0.006987
736000 -- (-2085.825) [-2076.077] (-2077.931) (-2079.138) * [-2059.413] (-2054.177) (-2088.620) (-2070.548) -- 0:03:48
737000 -- [-2060.199] (-2061.402) (-2086.229) (-2067.299) * (-2055.177) (-2084.294) [-2072.954] (-2058.179) -- 0:03:48
738000 -- (-2077.380) (-2060.582) [-2060.355] (-2058.797) * (-2070.158) (-2063.669) (-2072.162) [-2065.433] -- 0:03:47
739000 -- (-2066.163) (-2068.831) (-2059.902) [-2061.437] * (-2069.258) (-2066.425) [-2062.432] (-2070.977) -- 0:03:46
740000 -- (-2066.935) [-2057.276] (-2060.991) (-2072.073) * (-2087.192) (-2072.160) (-2077.597) [-2062.186] -- 0:03:45
Average standard deviation of split frequencies: 0.007117
741000 -- (-2072.573) (-2060.437) [-2059.419] (-2060.487) * (-2069.949) (-2075.727) [-2068.528] (-2060.202) -- 0:03:44
742000 -- (-2084.060) (-2066.200) (-2057.255) [-2057.734] * [-2059.504] (-2075.696) (-2070.706) (-2077.548) -- 0:03:43
743000 -- (-2086.244) (-2067.178) (-2068.879) [-2059.381] * (-2056.147) (-2070.610) (-2072.192) [-2059.084] -- 0:03:42
744000 -- (-2073.334) (-2061.559) [-2055.928] (-2061.720) * (-2062.970) (-2077.622) [-2059.162] (-2070.313) -- 0:03:41
745000 -- [-2058.404] (-2058.534) (-2064.184) (-2064.408) * (-2065.520) (-2079.201) [-2072.077] (-2080.809) -- 0:03:41
Average standard deviation of split frequencies: 0.007238
746000 -- (-2059.150) (-2066.373) (-2101.535) [-2065.216] * (-2059.582) (-2066.215) (-2075.451) [-2062.948] -- 0:03:40
747000 -- (-2071.342) (-2076.028) (-2078.872) [-2059.235] * (-2056.125) (-2063.087) (-2076.393) [-2067.601] -- 0:03:39
748000 -- [-2056.676] (-2070.312) (-2081.317) (-2068.088) * [-2050.868] (-2060.595) (-2070.509) (-2063.887) -- 0:03:38
749000 -- (-2081.913) [-2056.220] (-2061.463) (-2082.685) * (-2059.288) (-2071.507) (-2064.625) [-2070.450] -- 0:03:37
750000 -- (-2084.420) (-2081.072) [-2066.541] (-2062.044) * [-2053.533] (-2069.722) (-2055.608) (-2067.370) -- 0:03:36
Average standard deviation of split frequencies: 0.007307
751000 -- (-2071.260) [-2074.804] (-2063.937) (-2070.583) * (-2054.796) (-2083.681) (-2064.378) [-2049.523] -- 0:03:35
752000 -- (-2065.100) (-2059.591) [-2056.424] (-2073.573) * (-2076.432) (-2060.222) (-2086.712) [-2061.672] -- 0:03:35
753000 -- [-2056.332] (-2073.456) (-2055.155) (-2072.263) * (-2069.613) [-2056.341] (-2077.511) (-2074.394) -- 0:03:34
754000 -- [-2060.601] (-2058.073) (-2063.135) (-2071.291) * [-2065.528] (-2064.901) (-2068.579) (-2067.773) -- 0:03:33
755000 -- (-2077.209) [-2064.648] (-2064.720) (-2067.554) * (-2074.438) (-2072.463) (-2076.345) [-2076.401] -- 0:03:32
Average standard deviation of split frequencies: 0.007171
756000 -- (-2075.302) [-2058.428] (-2064.374) (-2072.761) * (-2064.859) [-2058.146] (-2058.296) (-2066.038) -- 0:03:31
757000 -- (-2078.164) [-2057.148] (-2069.935) (-2075.443) * (-2064.845) (-2068.143) (-2064.916) [-2060.537] -- 0:03:30
758000 -- (-2090.872) (-2067.166) [-2077.108] (-2087.252) * (-2061.570) [-2055.867] (-2058.429) (-2065.535) -- 0:03:29
759000 -- (-2067.764) (-2075.938) (-2061.549) [-2070.202] * (-2069.034) (-2061.293) [-2068.771] (-2082.055) -- 0:03:28
760000 -- [-2067.446] (-2083.437) (-2064.505) (-2083.917) * (-2090.459) (-2063.155) [-2053.779] (-2088.208) -- 0:03:28
Average standard deviation of split frequencies: 0.007071
761000 -- (-2058.246) (-2077.816) (-2068.598) [-2057.039] * (-2076.621) [-2061.784] (-2059.964) (-2074.461) -- 0:03:27
762000 -- [-2068.924] (-2071.648) (-2080.148) (-2069.988) * (-2064.877) (-2065.858) [-2064.996] (-2076.296) -- 0:03:26
763000 -- (-2062.960) [-2057.418] (-2061.800) (-2056.033) * (-2065.932) [-2060.009] (-2052.683) (-2074.524) -- 0:03:25
764000 -- (-2064.438) (-2066.679) [-2063.416] (-2071.373) * (-2080.302) [-2064.327] (-2073.845) (-2060.187) -- 0:03:24
765000 -- (-2065.043) [-2056.067] (-2058.573) (-2058.664) * (-2068.060) (-2068.758) (-2075.926) [-2055.780] -- 0:03:23
Average standard deviation of split frequencies: 0.006993
766000 -- [-2070.293] (-2065.857) (-2063.035) (-2071.631) * (-2073.668) (-2057.415) (-2056.134) [-2054.255] -- 0:03:22
767000 -- (-2066.242) [-2065.367] (-2072.718) (-2066.650) * (-2070.698) (-2072.138) [-2045.451] (-2064.386) -- 0:03:22
768000 -- (-2072.572) [-2060.235] (-2087.325) (-2063.974) * (-2077.940) (-2062.750) (-2070.726) [-2057.260] -- 0:03:21
769000 -- [-2052.131] (-2061.183) (-2069.257) (-2070.959) * (-2062.677) (-2070.173) (-2069.060) [-2071.055] -- 0:03:20
770000 -- (-2079.998) (-2051.800) (-2064.983) [-2052.373] * (-2066.124) [-2067.268] (-2075.029) (-2055.364) -- 0:03:19
Average standard deviation of split frequencies: 0.006840
771000 -- (-2070.793) [-2052.659] (-2066.659) (-2061.785) * (-2085.498) (-2071.650) [-2051.759] (-2057.181) -- 0:03:18
772000 -- (-2064.877) (-2076.042) [-2059.543] (-2057.492) * [-2053.327] (-2060.888) (-2062.771) (-2065.039) -- 0:03:17
773000 -- (-2065.001) (-2076.799) (-2068.732) [-2055.277] * (-2066.852) [-2058.392] (-2061.470) (-2061.208) -- 0:03:16
774000 -- [-2058.603] (-2085.058) (-2059.015) (-2068.192) * [-2052.847] (-2071.648) (-2075.254) (-2058.530) -- 0:03:15
775000 -- [-2068.446] (-2071.758) (-2072.946) (-2066.846) * (-2072.567) (-2062.728) (-2063.432) [-2060.716] -- 0:03:15
Average standard deviation of split frequencies: 0.006848
776000 -- (-2077.374) [-2060.869] (-2064.532) (-2082.444) * [-2068.629] (-2075.310) (-2060.381) (-2083.686) -- 0:03:14
777000 -- [-2063.770] (-2063.228) (-2066.860) (-2062.585) * (-2081.317) (-2083.879) (-2059.681) [-2061.850] -- 0:03:13
778000 -- (-2064.011) (-2078.622) (-2079.070) [-2055.850] * (-2065.293) (-2052.616) [-2070.255] (-2066.259) -- 0:03:12
779000 -- (-2070.479) (-2066.660) (-2074.763) [-2066.213] * (-2065.762) (-2071.181) (-2069.124) [-2052.370] -- 0:03:11
780000 -- (-2080.259) (-2058.449) (-2069.480) [-2067.473] * (-2070.015) (-2063.347) [-2069.182] (-2059.004) -- 0:03:10
Average standard deviation of split frequencies: 0.006505
781000 -- [-2063.721] (-2061.919) (-2067.947) (-2073.911) * (-2072.480) (-2054.432) (-2066.909) [-2063.872] -- 0:03:09
782000 -- (-2072.573) (-2059.951) [-2061.926] (-2063.372) * [-2057.910] (-2069.860) (-2071.615) (-2059.293) -- 0:03:09
783000 -- (-2055.111) (-2071.300) [-2053.421] (-2063.413) * (-2057.479) (-2076.209) [-2062.443] (-2075.934) -- 0:03:08
784000 -- [-2057.015] (-2080.593) (-2069.602) (-2061.356) * [-2061.338] (-2092.778) (-2059.525) (-2066.350) -- 0:03:07
785000 -- (-2074.525) (-2060.097) [-2060.935] (-2060.481) * (-2063.006) (-2076.196) [-2067.923] (-2052.787) -- 0:03:06
Average standard deviation of split frequencies: 0.006406
786000 -- [-2057.795] (-2069.837) (-2071.314) (-2076.170) * (-2083.800) (-2060.404) (-2072.957) [-2058.854] -- 0:03:05
787000 -- (-2068.736) (-2070.842) (-2057.630) [-2058.959] * [-2056.467] (-2077.538) (-2055.792) (-2065.241) -- 0:03:04
788000 -- (-2066.451) (-2069.076) (-2062.748) [-2060.487] * [-2054.324] (-2074.064) (-2064.555) (-2069.032) -- 0:03:03
789000 -- [-2063.463] (-2056.519) (-2071.578) (-2062.257) * (-2070.691) (-2069.026) (-2068.602) [-2070.030] -- 0:03:02
790000 -- (-2070.436) [-2047.091] (-2081.694) (-2060.443) * (-2054.316) (-2056.638) [-2067.549] (-2069.919) -- 0:03:02
Average standard deviation of split frequencies: 0.006504
791000 -- [-2061.960] (-2052.900) (-2066.123) (-2069.451) * (-2069.326) [-2067.071] (-2055.373) (-2068.485) -- 0:03:01
792000 -- (-2060.689) (-2065.771) [-2060.783] (-2071.817) * (-2054.874) [-2061.002] (-2069.376) (-2060.235) -- 0:03:00
793000 -- (-2062.384) [-2057.812] (-2057.780) (-2064.741) * (-2060.709) [-2052.843] (-2065.086) (-2063.595) -- 0:02:59
794000 -- [-2060.207] (-2069.326) (-2068.101) (-2075.425) * [-2055.998] (-2062.098) (-2064.488) (-2073.045) -- 0:02:58
795000 -- [-2070.048] (-2066.298) (-2076.840) (-2079.723) * [-2052.848] (-2068.333) (-2067.474) (-2061.489) -- 0:02:57
Average standard deviation of split frequencies: 0.006595
796000 -- (-2076.548) (-2073.350) [-2054.109] (-2068.658) * (-2056.815) [-2055.578] (-2073.786) (-2064.039) -- 0:02:56
797000 -- (-2075.932) (-2055.757) (-2077.659) [-2056.511] * (-2059.930) (-2077.539) (-2072.593) [-2062.662] -- 0:02:56
798000 -- (-2067.297) [-2060.310] (-2069.138) (-2075.245) * (-2083.026) (-2063.241) [-2064.695] (-2061.127) -- 0:02:55
799000 -- (-2067.252) [-2063.044] (-2052.294) (-2065.688) * (-2074.147) (-2076.434) (-2066.896) [-2058.120] -- 0:02:54
800000 -- (-2066.173) (-2074.463) [-2081.077] (-2071.354) * (-2070.824) (-2072.446) (-2058.523) [-2055.736] -- 0:02:53
Average standard deviation of split frequencies: 0.005941
801000 -- (-2056.534) (-2064.151) [-2073.891] (-2063.640) * (-2072.973) (-2063.670) [-2060.786] (-2065.945) -- 0:02:52
802000 -- (-2061.793) [-2064.100] (-2104.846) (-2081.689) * (-2065.975) (-2077.189) [-2069.751] (-2071.048) -- 0:02:51
803000 -- (-2064.533) [-2057.434] (-2081.650) (-2095.179) * (-2078.953) [-2067.064] (-2085.675) (-2076.882) -- 0:02:50
804000 -- (-2070.318) (-2063.408) [-2076.785] (-2064.089) * (-2074.110) [-2052.985] (-2071.645) (-2074.387) -- 0:02:49
805000 -- (-2074.204) (-2060.833) (-2060.365) [-2058.449] * [-2057.400] (-2068.758) (-2080.611) (-2071.816) -- 0:02:49
Average standard deviation of split frequencies: 0.005769
806000 -- (-2066.970) (-2067.193) (-2062.487) [-2064.036] * (-2071.293) (-2078.256) [-2069.172] (-2057.818) -- 0:02:48
807000 -- (-2088.967) (-2073.628) [-2056.488] (-2064.660) * (-2054.946) (-2070.107) [-2055.047] (-2059.362) -- 0:02:47
808000 -- (-2072.118) [-2067.924] (-2067.350) (-2061.986) * (-2067.512) (-2084.565) (-2071.748) [-2049.426] -- 0:02:46
809000 -- [-2070.145] (-2080.152) (-2059.759) (-2076.043) * [-2072.146] (-2070.411) (-2065.721) (-2068.351) -- 0:02:45
810000 -- (-2064.072) (-2074.838) [-2060.439] (-2072.751) * (-2067.804) (-2080.502) [-2068.159] (-2078.585) -- 0:02:44
Average standard deviation of split frequencies: 0.005736
811000 -- (-2062.808) [-2069.296] (-2063.138) (-2065.995) * (-2073.564) (-2061.656) (-2075.801) [-2065.211] -- 0:02:43
812000 -- [-2065.402] (-2077.349) (-2061.439) (-2062.364) * (-2076.338) [-2066.480] (-2071.940) (-2058.395) -- 0:02:42
813000 -- (-2067.769) (-2071.703) [-2060.784] (-2066.314) * (-2076.048) (-2067.173) (-2065.842) [-2060.594] -- 0:02:42
814000 -- (-2070.618) [-2072.908] (-2070.135) (-2051.012) * (-2064.213) (-2079.309) (-2056.660) [-2062.906] -- 0:02:41
815000 -- (-2079.768) (-2071.268) (-2077.277) [-2066.155] * (-2075.704) [-2077.696] (-2065.311) (-2066.683) -- 0:02:40
Average standard deviation of split frequencies: 0.006066
816000 -- (-2076.226) (-2064.915) (-2073.540) [-2061.389] * (-2063.584) (-2067.598) (-2067.215) [-2053.249] -- 0:02:39
817000 -- [-2072.149] (-2071.373) (-2065.897) (-2082.279) * [-2058.370] (-2090.733) (-2071.300) (-2072.368) -- 0:02:38
818000 -- (-2068.318) (-2065.547) [-2067.479] (-2061.175) * (-2069.040) [-2072.271] (-2060.781) (-2064.929) -- 0:02:37
819000 -- [-2061.131] (-2054.185) (-2059.080) (-2064.461) * [-2067.635] (-2064.595) (-2060.496) (-2078.668) -- 0:02:36
820000 -- (-2090.605) (-2064.034) (-2063.278) [-2054.824] * (-2051.147) (-2072.474) (-2064.942) [-2069.322] -- 0:02:36
Average standard deviation of split frequencies: 0.006110
821000 -- (-2065.873) [-2055.923] (-2063.151) (-2057.807) * (-2069.822) [-2067.055] (-2069.050) (-2056.301) -- 0:02:35
822000 -- (-2072.191) (-2055.256) [-2063.051] (-2065.869) * (-2066.593) [-2057.835] (-2063.447) (-2069.921) -- 0:02:34
823000 -- [-2073.662] (-2076.133) (-2070.132) (-2077.926) * (-2069.194) (-2068.605) [-2063.561] (-2066.229) -- 0:02:33
824000 -- (-2078.559) [-2072.014] (-2068.295) (-2072.475) * (-2077.874) (-2063.509) (-2059.307) [-2056.242] -- 0:02:32
825000 -- (-2071.776) (-2070.446) [-2060.168] (-2078.683) * [-2058.798] (-2063.306) (-2060.106) (-2076.045) -- 0:02:31
Average standard deviation of split frequencies: 0.005759
826000 -- (-2071.963) (-2069.824) [-2061.088] (-2076.714) * (-2058.405) [-2063.739] (-2076.128) (-2071.541) -- 0:02:30
827000 -- (-2063.636) (-2071.207) [-2059.576] (-2069.880) * (-2051.815) [-2067.237] (-2073.961) (-2086.398) -- 0:02:29
828000 -- (-2065.225) (-2070.373) [-2050.997] (-2069.129) * (-2058.513) [-2068.945] (-2065.696) (-2076.311) -- 0:02:29
829000 -- (-2072.254) [-2059.354] (-2055.821) (-2073.664) * (-2073.638) (-2069.606) (-2077.236) [-2059.201] -- 0:02:28
830000 -- [-2056.761] (-2076.352) (-2071.623) (-2080.753) * (-2086.245) (-2073.211) (-2062.913) [-2058.722] -- 0:02:27
Average standard deviation of split frequencies: 0.005520
831000 -- [-2073.336] (-2066.660) (-2085.832) (-2074.973) * [-2059.032] (-2068.491) (-2075.427) (-2062.903) -- 0:02:26
832000 -- (-2060.214) (-2062.469) (-2064.082) [-2067.551] * (-2068.053) [-2056.642] (-2074.901) (-2062.375) -- 0:02:25
833000 -- [-2072.719] (-2062.610) (-2070.449) (-2064.248) * (-2075.055) (-2063.105) (-2071.617) [-2053.852] -- 0:02:24
834000 -- (-2064.685) [-2070.984] (-2056.934) (-2070.369) * (-2067.159) (-2061.239) (-2079.096) [-2052.868] -- 0:02:23
835000 -- (-2084.025) [-2059.078] (-2062.314) (-2071.239) * [-2054.519] (-2071.597) (-2066.083) (-2081.802) -- 0:02:23
Average standard deviation of split frequencies: 0.005485
836000 -- [-2052.925] (-2065.892) (-2069.527) (-2070.643) * [-2062.500] (-2070.699) (-2069.266) (-2079.765) -- 0:02:22
837000 -- [-2060.057] (-2063.210) (-2060.877) (-2063.469) * (-2059.169) (-2064.059) (-2059.899) [-2063.180] -- 0:02:21
838000 -- (-2079.894) [-2060.408] (-2068.514) (-2052.923) * (-2064.018) (-2071.958) [-2060.295] (-2060.233) -- 0:02:20
839000 -- (-2075.654) (-2072.110) (-2070.490) [-2057.859] * (-2082.277) [-2064.916] (-2064.470) (-2072.500) -- 0:02:19
840000 -- (-2069.793) [-2065.618] (-2079.388) (-2064.776) * (-2081.321) [-2061.772] (-2072.976) (-2063.978) -- 0:02:18
Average standard deviation of split frequencies: 0.005633
841000 -- (-2071.339) (-2075.680) [-2065.250] (-2060.964) * (-2074.151) (-2058.804) (-2065.051) [-2054.096] -- 0:02:17
842000 -- (-2080.284) (-2056.564) [-2066.563] (-2068.814) * (-2077.429) (-2065.503) (-2083.060) [-2059.444] -- 0:02:16
843000 -- [-2056.076] (-2075.065) (-2062.955) (-2061.349) * (-2071.396) [-2070.250] (-2055.746) (-2059.581) -- 0:02:16
844000 -- [-2060.151] (-2065.832) (-2085.598) (-2074.249) * (-2073.938) (-2065.313) (-2079.476) [-2069.628] -- 0:02:15
845000 -- (-2069.067) [-2065.054] (-2076.069) (-2069.703) * [-2059.580] (-2073.093) (-2071.149) (-2067.100) -- 0:02:14
Average standard deviation of split frequencies: 0.005901
846000 -- (-2069.602) (-2067.795) (-2059.102) [-2059.758] * (-2061.732) [-2074.945] (-2094.716) (-2076.976) -- 0:02:13
847000 -- [-2059.688] (-2071.435) (-2064.485) (-2071.640) * [-2062.314] (-2066.845) (-2081.727) (-2069.604) -- 0:02:12
848000 -- [-2058.955] (-2071.790) (-2075.805) (-2067.199) * (-2071.696) (-2066.536) (-2077.741) [-2067.780] -- 0:02:11
849000 -- [-2061.246] (-2072.657) (-2070.788) (-2065.392) * (-2081.826) (-2076.615) (-2078.509) [-2056.039] -- 0:02:10
850000 -- [-2075.895] (-2075.183) (-2065.704) (-2081.746) * (-2079.393) (-2056.091) [-2066.567] (-2064.451) -- 0:02:09
Average standard deviation of split frequencies: 0.006197
851000 -- (-2070.456) (-2088.636) [-2071.610] (-2070.434) * [-2062.007] (-2061.950) (-2065.369) (-2060.018) -- 0:02:09
852000 -- (-2064.908) [-2067.383] (-2073.923) (-2077.441) * (-2068.928) [-2065.251] (-2069.321) (-2055.883) -- 0:02:08
853000 -- (-2063.739) (-2050.818) (-2080.068) [-2074.458] * [-2067.963] (-2064.661) (-2062.019) (-2078.509) -- 0:02:07
854000 -- (-2062.924) (-2082.845) (-2064.758) [-2061.988] * (-2059.976) (-2063.615) [-2055.712] (-2071.523) -- 0:02:06
855000 -- (-2074.717) (-2081.576) [-2056.411] (-2053.437) * (-2059.098) (-2075.075) (-2075.739) [-2056.389] -- 0:02:05
Average standard deviation of split frequencies: 0.006358
856000 -- (-2061.814) (-2076.136) [-2057.717] (-2073.088) * (-2079.147) (-2076.776) (-2060.150) [-2058.669] -- 0:02:04
857000 -- (-2080.875) (-2078.114) (-2064.730) [-2064.493] * (-2082.817) [-2063.543] (-2065.499) (-2062.732) -- 0:02:03
858000 -- (-2055.614) (-2068.958) [-2059.800] (-2060.573) * [-2056.157] (-2076.296) (-2070.369) (-2064.278) -- 0:02:02
859000 -- (-2072.827) (-2086.250) (-2064.072) [-2073.323] * (-2061.503) (-2078.586) [-2064.027] (-2074.938) -- 0:02:02
860000 -- [-2067.386] (-2077.708) (-2050.095) (-2058.383) * [-2053.511] (-2065.663) (-2070.334) (-2060.746) -- 0:02:01
Average standard deviation of split frequencies: 0.006722
861000 -- (-2061.284) (-2068.518) (-2064.556) [-2061.197] * (-2068.733) (-2071.648) (-2071.988) [-2058.113] -- 0:02:00
862000 -- (-2064.802) [-2056.661] (-2067.412) (-2075.338) * [-2067.838] (-2051.888) (-2055.997) (-2058.976) -- 0:01:59
863000 -- (-2068.818) [-2055.899] (-2065.094) (-2075.357) * (-2074.751) (-2064.262) [-2052.591] (-2059.449) -- 0:01:58
864000 -- [-2056.522] (-2058.612) (-2085.834) (-2063.026) * (-2056.235) (-2078.761) [-2053.624] (-2058.564) -- 0:01:57
865000 -- (-2064.651) [-2060.351] (-2073.213) (-2066.300) * (-2067.864) (-2067.257) [-2063.247] (-2067.823) -- 0:01:56
Average standard deviation of split frequencies: 0.006829
866000 -- (-2076.006) (-2073.562) [-2054.173] (-2058.323) * (-2056.997) [-2054.259] (-2058.963) (-2062.696) -- 0:01:56
867000 -- (-2073.375) (-2065.598) [-2061.803] (-2074.241) * (-2059.458) (-2082.945) (-2071.697) [-2067.025] -- 0:01:55
868000 -- (-2088.693) (-2081.904) (-2063.648) [-2063.661] * (-2062.022) (-2054.137) [-2055.916] (-2060.719) -- 0:01:54
869000 -- (-2073.821) [-2060.192] (-2064.567) (-2062.490) * (-2069.283) (-2060.713) [-2070.319] (-2067.653) -- 0:01:53
870000 -- (-2064.290) [-2066.939] (-2078.152) (-2063.429) * (-2072.962) (-2073.019) (-2066.966) [-2063.178] -- 0:01:52
Average standard deviation of split frequencies: 0.006546
871000 -- (-2073.094) [-2070.118] (-2060.866) (-2056.613) * (-2054.600) (-2077.336) [-2063.040] (-2066.977) -- 0:01:51
872000 -- [-2051.102] (-2068.290) (-2057.568) (-2068.184) * [-2048.074] (-2076.099) (-2069.449) (-2051.563) -- 0:01:50
873000 -- (-2086.704) (-2077.665) [-2071.033] (-2072.468) * (-2064.051) (-2068.798) (-2068.988) [-2056.149] -- 0:01:49
874000 -- (-2064.306) (-2068.823) [-2062.054] (-2061.570) * (-2077.679) [-2070.313] (-2070.997) (-2068.716) -- 0:01:49
875000 -- (-2082.930) [-2056.811] (-2068.510) (-2067.859) * (-2064.701) (-2062.005) (-2066.061) [-2060.107] -- 0:01:48
Average standard deviation of split frequencies: 0.007142
876000 -- (-2091.637) [-2046.934] (-2060.220) (-2076.752) * (-2057.408) (-2064.836) (-2066.873) [-2050.039] -- 0:01:47
877000 -- (-2068.151) (-2075.771) [-2059.887] (-2089.027) * (-2063.504) [-2058.267] (-2068.499) (-2058.027) -- 0:01:46
878000 -- (-2054.329) [-2056.099] (-2066.080) (-2067.416) * (-2077.042) [-2073.581] (-2070.221) (-2061.506) -- 0:01:45
879000 -- (-2083.434) [-2060.761] (-2078.832) (-2070.332) * (-2051.387) (-2082.050) (-2068.835) [-2069.519] -- 0:01:44
880000 -- (-2059.773) (-2063.589) (-2073.493) [-2058.827] * [-2046.469] (-2077.277) (-2089.559) (-2062.829) -- 0:01:43
Average standard deviation of split frequencies: 0.006983
881000 -- (-2065.515) [-2060.910] (-2068.129) (-2055.467) * [-2060.220] (-2074.731) (-2069.047) (-2066.216) -- 0:01:43
882000 -- (-2062.714) (-2067.788) (-2061.710) [-2063.279] * (-2069.457) (-2069.397) [-2053.174] (-2070.064) -- 0:01:42
883000 -- (-2070.242) (-2060.802) [-2064.868] (-2080.552) * (-2079.330) [-2071.065] (-2077.243) (-2064.633) -- 0:01:41
884000 -- (-2077.323) (-2068.780) [-2067.080] (-2087.030) * (-2056.263) (-2075.574) (-2075.097) [-2066.119] -- 0:01:40
885000 -- (-2056.611) (-2070.542) (-2074.186) [-2066.490] * (-2067.680) (-2070.333) (-2064.702) [-2055.175] -- 0:01:39
Average standard deviation of split frequencies: 0.007110
886000 -- (-2062.422) [-2057.044] (-2059.934) (-2059.160) * [-2051.157] (-2075.874) (-2078.151) (-2073.580) -- 0:01:38
887000 -- (-2057.148) (-2055.691) (-2081.473) [-2062.615] * (-2055.394) (-2068.219) [-2058.384] (-2078.763) -- 0:01:37
888000 -- [-2054.221] (-2072.940) (-2061.342) (-2064.270) * [-2067.347] (-2068.849) (-2068.896) (-2063.422) -- 0:01:37
889000 -- (-2065.089) (-2073.399) (-2079.235) [-2058.618] * [-2056.305] (-2053.853) (-2079.936) (-2088.585) -- 0:01:36
890000 -- (-2081.386) [-2057.161] (-2073.942) (-2066.496) * (-2063.775) [-2065.030] (-2073.640) (-2055.942) -- 0:01:35
Average standard deviation of split frequencies: 0.007410
891000 -- (-2082.429) (-2078.470) (-2087.433) [-2070.540] * (-2065.805) (-2056.432) (-2073.596) [-2059.131] -- 0:01:34
892000 -- (-2067.846) (-2074.335) (-2068.141) [-2061.362] * [-2070.271] (-2073.741) (-2074.565) (-2066.075) -- 0:01:33
893000 -- (-2062.465) (-2087.850) (-2068.020) [-2057.866] * [-2056.721] (-2074.129) (-2092.412) (-2079.308) -- 0:01:32
894000 -- (-2074.726) (-2068.369) (-2070.754) [-2056.473] * (-2067.448) (-2074.678) (-2073.442) [-2069.319] -- 0:01:31
895000 -- (-2073.617) (-2064.705) [-2067.699] (-2073.147) * (-2070.005) (-2067.037) (-2080.799) [-2070.657] -- 0:01:31
Average standard deviation of split frequencies: 0.007150
896000 -- (-2092.801) (-2070.490) [-2058.961] (-2061.050) * [-2057.258] (-2077.977) (-2078.162) (-2064.806) -- 0:01:30
897000 -- (-2071.570) (-2064.209) [-2063.547] (-2067.115) * (-2066.184) (-2072.301) (-2066.888) [-2069.408] -- 0:01:29
898000 -- [-2064.621] (-2059.909) (-2073.099) (-2075.811) * (-2064.887) (-2072.704) [-2071.525] (-2076.303) -- 0:01:28
899000 -- (-2071.409) [-2059.054] (-2086.433) (-2090.438) * (-2070.859) (-2079.813) [-2067.023] (-2087.042) -- 0:01:27
900000 -- (-2065.877) (-2061.719) (-2082.844) [-2055.569] * (-2063.364) (-2067.748) [-2057.872] (-2071.860) -- 0:01:26
Average standard deviation of split frequencies: 0.007066
901000 -- (-2060.633) (-2079.349) (-2075.408) [-2052.549] * (-2052.363) (-2073.110) [-2060.661] (-2072.474) -- 0:01:25
902000 -- (-2075.464) (-2065.032) [-2057.705] (-2070.555) * (-2067.270) [-2057.721] (-2065.104) (-2066.748) -- 0:01:24
903000 -- (-2055.627) (-2063.923) (-2067.587) [-2065.260] * (-2070.308) [-2047.212] (-2064.132) (-2052.248) -- 0:01:24
904000 -- [-2057.694] (-2054.298) (-2080.962) (-2073.260) * [-2067.467] (-2068.219) (-2074.051) (-2070.543) -- 0:01:23
905000 -- [-2059.030] (-2065.960) (-2074.812) (-2079.530) * (-2072.483) [-2071.708] (-2080.354) (-2051.779) -- 0:01:22
Average standard deviation of split frequencies: 0.006646
906000 -- (-2092.741) (-2069.265) (-2072.631) [-2079.133] * (-2073.953) (-2067.744) [-2070.687] (-2068.698) -- 0:01:21
907000 -- [-2063.295] (-2066.249) (-2083.133) (-2079.351) * (-2076.146) [-2070.752] (-2071.015) (-2068.821) -- 0:01:20
908000 -- (-2071.866) [-2058.298] (-2082.060) (-2077.781) * [-2064.752] (-2061.462) (-2059.603) (-2063.892) -- 0:01:19
909000 -- (-2067.487) (-2065.146) (-2076.124) [-2062.041] * (-2062.443) (-2067.970) (-2059.999) [-2051.410] -- 0:01:18
910000 -- (-2077.112) (-2075.644) [-2060.374] (-2072.332) * (-2076.721) (-2079.780) (-2064.200) [-2055.834] -- 0:01:18
Average standard deviation of split frequencies: 0.006776
911000 -- (-2054.355) (-2065.464) [-2059.081] (-2068.346) * (-2054.786) (-2074.683) (-2065.560) [-2060.692] -- 0:01:17
912000 -- [-2055.999] (-2056.621) (-2053.480) (-2068.027) * [-2053.378] (-2062.513) (-2077.705) (-2052.992) -- 0:01:16
913000 -- [-2063.460] (-2056.149) (-2077.385) (-2060.028) * (-2068.431) (-2062.289) (-2077.773) [-2063.361] -- 0:01:15
914000 -- (-2060.374) [-2047.387] (-2070.694) (-2076.474) * (-2067.455) (-2055.836) [-2063.782] (-2051.479) -- 0:01:14
915000 -- (-2070.190) (-2060.289) [-2073.904] (-2068.972) * (-2077.674) (-2056.743) [-2060.111] (-2059.604) -- 0:01:13
Average standard deviation of split frequencies: 0.006690
916000 -- (-2056.927) (-2067.019) (-2075.627) [-2059.007] * (-2066.434) (-2066.761) (-2063.081) [-2051.076] -- 0:01:12
917000 -- (-2067.310) (-2052.679) (-2071.888) [-2058.534] * (-2072.022) (-2068.745) (-2055.603) [-2062.805] -- 0:01:11
918000 -- (-2074.611) [-2064.985] (-2064.899) (-2073.962) * [-2063.202] (-2063.571) (-2058.760) (-2046.844) -- 0:01:11
919000 -- (-2072.529) (-2064.047) (-2072.080) [-2059.483] * (-2074.636) (-2069.732) [-2057.825] (-2058.418) -- 0:01:10
920000 -- (-2069.843) (-2068.861) (-2075.974) [-2059.823] * (-2073.282) (-2068.095) [-2057.007] (-2069.432) -- 0:01:09
Average standard deviation of split frequencies: 0.006610
921000 -- (-2065.905) [-2061.897] (-2060.915) (-2065.539) * (-2067.915) (-2067.834) [-2061.406] (-2060.778) -- 0:01:08
922000 -- (-2086.298) [-2059.622] (-2070.645) (-2070.033) * (-2072.561) (-2083.780) (-2058.656) [-2067.310] -- 0:01:07
923000 -- (-2068.572) (-2067.002) (-2060.968) [-2055.907] * (-2081.856) (-2068.018) [-2071.334] (-2057.423) -- 0:01:06
924000 -- (-2072.364) (-2056.647) [-2062.108] (-2071.464) * [-2059.034] (-2070.303) (-2074.196) (-2063.370) -- 0:01:05
925000 -- [-2060.822] (-2058.223) (-2068.743) (-2069.578) * (-2070.913) (-2069.640) (-2074.636) [-2051.584] -- 0:01:04
Average standard deviation of split frequencies: 0.006549
926000 -- (-2076.413) [-2057.681] (-2082.854) (-2063.087) * (-2075.344) (-2067.893) (-2079.784) [-2059.039] -- 0:01:04
927000 -- (-2068.769) [-2068.070] (-2080.227) (-2054.875) * (-2075.404) [-2056.788] (-2067.650) (-2068.439) -- 0:01:03
928000 -- (-2063.238) (-2066.102) [-2068.843] (-2066.912) * (-2073.666) (-2075.429) (-2077.670) [-2071.024] -- 0:01:02
929000 -- (-2073.145) (-2067.795) [-2065.086] (-2082.758) * (-2069.791) [-2063.806] (-2066.448) (-2087.963) -- 0:01:01
930000 -- [-2060.767] (-2070.230) (-2064.509) (-2080.178) * (-2069.009) (-2063.495) [-2067.186] (-2076.039) -- 0:01:00
Average standard deviation of split frequencies: 0.006861
931000 -- (-2067.841) [-2056.396] (-2076.945) (-2088.829) * [-2053.929] (-2071.360) (-2076.631) (-2074.416) -- 0:00:59
932000 -- (-2066.838) (-2070.111) [-2055.036] (-2068.448) * [-2059.914] (-2064.003) (-2066.883) (-2058.237) -- 0:00:58
933000 -- [-2057.518] (-2071.228) (-2068.634) (-2064.428) * (-2068.828) (-2069.818) [-2063.786] (-2075.243) -- 0:00:58
934000 -- (-2073.280) (-2059.594) (-2073.478) [-2062.350] * (-2072.149) [-2049.860] (-2069.660) (-2065.110) -- 0:00:57
935000 -- (-2072.179) [-2060.247] (-2072.844) (-2071.703) * [-2057.802] (-2059.967) (-2071.316) (-2064.982) -- 0:00:56
Average standard deviation of split frequencies: 0.007028
936000 -- (-2057.982) [-2068.271] (-2075.783) (-2067.862) * (-2066.354) (-2071.370) (-2079.440) [-2055.571] -- 0:00:55
937000 -- [-2049.984] (-2060.346) (-2060.784) (-2073.963) * (-2072.120) (-2069.874) (-2052.938) [-2061.339] -- 0:00:54
938000 -- [-2059.232] (-2060.551) (-2074.723) (-2075.050) * [-2064.844] (-2060.560) (-2064.415) (-2055.514) -- 0:00:53
939000 -- (-2071.422) [-2066.840] (-2078.771) (-2066.676) * [-2061.032] (-2067.686) (-2072.372) (-2055.646) -- 0:00:52
940000 -- (-2060.463) [-2061.342] (-2071.808) (-2068.641) * (-2064.020) [-2061.541] (-2065.196) (-2070.673) -- 0:00:51
Average standard deviation of split frequencies: 0.006925
941000 -- (-2066.183) (-2074.340) (-2076.535) [-2054.988] * (-2075.413) (-2064.179) (-2060.531) [-2057.947] -- 0:00:51
942000 -- (-2071.303) (-2073.177) (-2078.726) [-2058.789] * (-2081.009) (-2088.913) [-2077.912] (-2057.661) -- 0:00:50
943000 -- (-2071.127) (-2068.011) (-2079.208) [-2066.528] * (-2073.663) (-2071.847) (-2069.127) [-2064.875] -- 0:00:49
944000 -- (-2069.176) [-2057.296] (-2063.695) (-2073.458) * (-2068.476) [-2067.705] (-2068.329) (-2064.898) -- 0:00:48
945000 -- (-2063.052) [-2064.914] (-2062.651) (-2069.358) * (-2063.710) (-2068.046) [-2047.652] (-2066.732) -- 0:00:47
Average standard deviation of split frequencies: 0.007090
946000 -- (-2066.992) [-2059.129] (-2064.529) (-2069.541) * [-2054.664] (-2072.685) (-2062.681) (-2065.856) -- 0:00:46
947000 -- (-2068.828) (-2059.930) [-2068.445] (-2064.180) * (-2056.589) (-2075.842) (-2068.009) [-2064.582] -- 0:00:45
948000 -- (-2062.534) [-2064.657] (-2072.448) (-2064.921) * (-2070.931) [-2061.855] (-2058.506) (-2078.263) -- 0:00:45
949000 -- (-2067.607) (-2083.147) (-2079.396) [-2064.425] * (-2053.084) [-2055.530] (-2065.340) (-2071.515) -- 0:00:44
950000 -- [-2057.053] (-2059.287) (-2066.357) (-2072.756) * (-2053.403) (-2083.645) [-2053.323] (-2081.506) -- 0:00:43
Average standard deviation of split frequencies: 0.006942
951000 -- (-2072.926) (-2076.826) [-2060.290] (-2076.507) * (-2067.939) (-2084.024) [-2050.892] (-2069.053) -- 0:00:42
952000 -- [-2060.511] (-2082.192) (-2074.118) (-2064.015) * (-2072.781) (-2068.465) (-2074.729) [-2058.669] -- 0:00:41
953000 -- [-2072.062] (-2054.474) (-2087.102) (-2077.931) * (-2063.178) (-2058.399) (-2076.260) [-2067.240] -- 0:00:40
954000 -- [-2063.447] (-2068.263) (-2076.887) (-2057.048) * (-2055.148) (-2079.292) [-2059.414] (-2085.359) -- 0:00:39
955000 -- (-2078.480) (-2071.212) (-2083.932) [-2056.598] * (-2061.149) (-2098.097) (-2058.671) [-2062.325] -- 0:00:38
Average standard deviation of split frequencies: 0.006522
956000 -- (-2093.046) (-2058.217) (-2073.045) [-2059.143] * (-2060.006) (-2074.057) (-2061.971) [-2060.083] -- 0:00:38
957000 -- (-2070.733) [-2063.449] (-2083.451) (-2064.954) * (-2066.187) (-2070.207) (-2070.806) [-2061.029] -- 0:00:37
958000 -- [-2064.471] (-2066.322) (-2076.918) (-2058.554) * [-2057.617] (-2060.437) (-2060.996) (-2081.961) -- 0:00:36
959000 -- (-2065.890) [-2056.375] (-2071.664) (-2063.448) * [-2060.324] (-2067.303) (-2084.021) (-2068.054) -- 0:00:35
960000 -- (-2084.241) (-2064.897) (-2071.775) [-2058.752] * (-2063.155) (-2076.694) (-2066.904) [-2057.978] -- 0:00:34
Average standard deviation of split frequencies: 0.006268
961000 -- (-2071.958) [-2069.908] (-2067.956) (-2064.096) * (-2062.627) (-2073.161) (-2073.329) [-2056.812] -- 0:00:33
962000 -- (-2066.268) (-2069.440) [-2064.683] (-2067.026) * (-2065.946) (-2098.070) [-2058.873] (-2060.685) -- 0:00:32
963000 -- (-2069.840) [-2052.884] (-2056.140) (-2068.855) * (-2073.305) (-2060.146) [-2056.080] (-2069.169) -- 0:00:32
964000 -- (-2059.763) [-2065.971] (-2067.746) (-2060.364) * [-2049.832] (-2085.144) (-2068.546) (-2060.976) -- 0:00:31
965000 -- (-2071.424) (-2069.120) [-2052.631] (-2061.943) * (-2073.996) (-2071.132) (-2067.818) [-2049.717] -- 0:00:30
Average standard deviation of split frequencies: 0.006300
966000 -- [-2066.493] (-2075.758) (-2061.962) (-2078.248) * [-2050.572] (-2074.466) (-2067.959) (-2073.762) -- 0:00:29
967000 -- (-2067.188) (-2072.903) [-2066.267] (-2085.502) * (-2062.297) [-2070.761] (-2063.297) (-2070.100) -- 0:00:28
968000 -- (-2076.134) (-2076.606) [-2072.399] (-2058.270) * (-2064.783) (-2072.838) (-2075.228) [-2064.953] -- 0:00:27
969000 -- (-2072.104) (-2068.760) [-2054.620] (-2070.053) * [-2063.751] (-2073.570) (-2069.622) (-2052.615) -- 0:00:26
970000 -- (-2058.901) (-2067.256) (-2073.053) [-2058.612] * (-2076.514) [-2067.623] (-2070.338) (-2072.026) -- 0:00:25
Average standard deviation of split frequencies: 0.006269
971000 -- (-2070.101) (-2062.179) [-2070.125] (-2084.565) * [-2059.117] (-2054.769) (-2075.997) (-2064.638) -- 0:00:25
972000 -- (-2075.025) (-2073.150) (-2065.997) [-2061.004] * [-2067.972] (-2073.212) (-2075.277) (-2062.923) -- 0:00:24
973000 -- [-2059.655] (-2068.913) (-2071.019) (-2077.376) * (-2075.246) (-2060.234) (-2074.876) [-2069.886] -- 0:00:23
974000 -- (-2069.468) (-2084.808) (-2060.107) [-2070.499] * (-2063.025) (-2055.504) [-2062.594] (-2057.729) -- 0:00:22
975000 -- [-2056.307] (-2064.634) (-2079.808) (-2075.117) * (-2079.641) (-2063.125) (-2062.996) [-2063.166] -- 0:00:21
Average standard deviation of split frequencies: 0.006191
976000 -- (-2075.405) (-2077.806) (-2081.166) [-2063.215] * [-2063.160] (-2064.115) (-2072.136) (-2063.149) -- 0:00:20
977000 -- (-2056.790) [-2068.945] (-2066.075) (-2064.967) * (-2058.735) (-2068.563) [-2068.767] (-2053.053) -- 0:00:19
978000 -- (-2068.092) (-2068.870) [-2050.848] (-2085.871) * (-2063.721) (-2088.079) [-2065.168] (-2078.409) -- 0:00:19
979000 -- [-2069.584] (-2075.810) (-2058.780) (-2082.353) * (-2074.339) (-2072.085) [-2060.326] (-2069.696) -- 0:00:18
980000 -- [-2054.629] (-2072.557) (-2058.837) (-2070.480) * (-2060.689) (-2073.214) (-2056.651) [-2065.255] -- 0:00:17
Average standard deviation of split frequencies: 0.005834
981000 -- [-2055.194] (-2075.082) (-2086.930) (-2059.633) * (-2069.254) (-2072.312) (-2063.541) [-2068.621] -- 0:00:16
982000 -- [-2062.007] (-2067.571) (-2073.701) (-2059.407) * (-2070.146) (-2086.825) (-2077.028) [-2062.733] -- 0:00:15
983000 -- (-2080.310) (-2070.832) (-2079.312) [-2056.510] * (-2097.754) [-2063.711] (-2080.709) (-2072.398) -- 0:00:14
984000 -- (-2072.655) [-2063.252] (-2073.648) (-2059.686) * (-2077.618) (-2065.303) (-2076.881) [-2072.493] -- 0:00:13
985000 -- (-2071.050) [-2063.764] (-2092.432) (-2069.141) * [-2057.835] (-2065.121) (-2075.944) (-2069.325) -- 0:00:12
Average standard deviation of split frequencies: 0.006476
986000 -- (-2061.730) [-2062.140] (-2076.763) (-2077.896) * (-2057.707) (-2067.708) (-2068.969) [-2067.715] -- 0:00:12
987000 -- (-2056.043) [-2069.408] (-2068.050) (-2077.898) * (-2067.054) (-2067.812) [-2070.775] (-2057.056) -- 0:00:11
988000 -- [-2057.383] (-2080.907) (-2072.984) (-2065.154) * [-2062.631] (-2064.817) (-2060.647) (-2056.971) -- 0:00:10
989000 -- (-2073.157) (-2059.348) [-2071.646] (-2066.795) * (-2076.094) (-2082.585) (-2066.353) [-2063.697] -- 0:00:09
990000 -- (-2063.628) (-2065.193) (-2077.459) [-2072.420] * (-2061.506) (-2065.952) [-2061.752] (-2058.897) -- 0:00:08
Average standard deviation of split frequencies: 0.006316
991000 -- [-2054.515] (-2082.645) (-2072.606) (-2057.145) * (-2076.080) (-2067.040) (-2066.167) [-2057.824] -- 0:00:07
992000 -- (-2059.925) [-2072.420] (-2077.708) (-2054.589) * (-2084.369) (-2053.230) (-2065.990) [-2051.736] -- 0:00:06
993000 -- (-2050.574) [-2052.194] (-2070.878) (-2071.794) * (-2073.469) (-2062.156) (-2058.921) [-2061.491] -- 0:00:06
994000 -- (-2067.216) (-2074.913) (-2059.400) [-2058.623] * (-2071.340) (-2079.321) (-2066.380) [-2058.757] -- 0:00:05
995000 -- (-2052.570) (-2076.182) (-2072.865) [-2065.461] * (-2084.253) (-2065.405) (-2075.432) [-2058.705] -- 0:00:04
Average standard deviation of split frequencies: 0.005938
996000 -- (-2062.552) (-2065.100) [-2051.577] (-2081.813) * [-2057.976] (-2067.914) (-2066.780) (-2066.878) -- 0:00:03
997000 -- [-2049.362] (-2058.804) (-2058.639) (-2061.210) * (-2065.346) [-2066.078] (-2076.309) (-2073.919) -- 0:00:02
998000 -- (-2066.123) [-2052.038] (-2064.359) (-2070.560) * (-2057.326) (-2070.558) (-2078.330) [-2060.904] -- 0:00:01
999000 -- (-2074.638) (-2055.983) (-2067.601) [-2063.085] * [-2057.340] (-2067.820) (-2070.075) (-2073.051) -- 0:00:00
1000000 -- (-2075.094) [-2057.032] (-2072.223) (-2087.533) * (-2069.574) [-2056.479] (-2063.417) (-2067.440) -- 0:00:00
Average standard deviation of split frequencies: 0.006167
Analysis completed in 14 mins 26 seconds
Analysis used 865.45 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -2041.71
Likelihood of best state for "cold" chain of run 2 was -2041.36
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
49.6 % ( 43 %) Dirichlet(Revmat{all})
63.3 % ( 56 %) Slider(Revmat{all})
26.5 % ( 28 %) Dirichlet(Pi{all})
28.6 % ( 27 %) Slider(Pi{all})
47.3 % ( 22 %) Multiplier(Alpha{1,2})
55.8 % ( 27 %) Multiplier(Alpha{3})
58.5 % ( 30 %) Slider(Pinvar{all})
51.2 % ( 59 %) ExtSPR(Tau{all},V{all})
38.4 % ( 40 %) ExtTBR(Tau{all},V{all})
51.1 % ( 49 %) NNI(Tau{all},V{all})
53.3 % ( 54 %) ParsSPR(Tau{all},V{all})
27.2 % ( 32 %) Multiplier(V{all})
63.3 % ( 54 %) Nodeslider(V{all})
25.2 % ( 24 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
48.9 % ( 39 %) Dirichlet(Revmat{all})
63.4 % ( 55 %) Slider(Revmat{all})
26.4 % ( 27 %) Dirichlet(Pi{all})
28.9 % ( 27 %) Slider(Pi{all})
46.8 % ( 30 %) Multiplier(Alpha{1,2})
55.8 % ( 27 %) Multiplier(Alpha{3})
58.8 % ( 34 %) Slider(Pinvar{all})
51.4 % ( 51 %) ExtSPR(Tau{all},V{all})
38.1 % ( 30 %) ExtTBR(Tau{all},V{all})
51.5 % ( 50 %) NNI(Tau{all},V{all})
53.6 % ( 53 %) ParsSPR(Tau{all},V{all})
27.2 % ( 24 %) Multiplier(V{all})
63.2 % ( 63 %) Nodeslider(V{all})
25.4 % ( 31 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.56 0.27 0.11
2 | 166263 0.59 0.30
3 | 166555 166719 0.61
4 | 166738 166757 166968
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.56 0.27 0.11
2 | 167051 0.59 0.30
3 | 166458 166925 0.61
4 | 167110 166555 165901
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -2056.99
| 2 |
| 1 11 |
| 2 |
| 2 1 2 2 |
| 1 2 1 1 2 2 2 |
| * 1 1 21 1 *|
|2 2 2 2 2 2 2 2 1 * 2 2*2 2 |
|1 * 1 2 2*2 2 1* 1 21 1 2 2 1 1 |
| 2 22 1 1 11 2 1 2 2 1 1 2 |
| 1 1 1 2 21 1 1 |
| 1 2 2 2 1 2 2 11 |
| 1 2 1* 2 2 1*11 2 1 |
| 1 1 1 2 2 |
| * 1 1 |
| 11 2 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -2064.33
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2049.49 -2086.80
2 -2048.52 -2080.56
--------------------------------------
TOTAL -2048.89 -2086.11
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.340899 0.001680 0.263418 0.419926 0.338056 1213.54 1264.09 1.000
r(A<->C){all} 0.070377 0.000570 0.031788 0.120544 0.068119 815.12 817.16 1.000
r(A<->G){all} 0.244296 0.001515 0.167895 0.319547 0.242887 530.56 661.30 1.000
r(A<->T){all} 0.069568 0.000500 0.028521 0.113691 0.067146 766.32 881.72 1.001
r(C<->G){all} 0.057384 0.000358 0.022706 0.093881 0.055287 878.15 884.54 1.000
r(C<->T){all} 0.484219 0.002443 0.384626 0.576746 0.484624 533.35 650.59 1.000
r(G<->T){all} 0.074156 0.000376 0.038580 0.111961 0.072689 677.78 795.35 1.000
pi(A){all} 0.215603 0.000208 0.187779 0.242889 0.215499 1049.36 1113.12 1.000
pi(C){all} 0.226057 0.000217 0.198875 0.254557 0.225921 1004.69 1109.10 1.000
pi(G){all} 0.285688 0.000253 0.254679 0.316512 0.285397 1280.42 1326.84 1.000
pi(T){all} 0.272652 0.000250 0.241171 0.301913 0.272431 1040.22 1053.98 1.000
alpha{1,2} 0.291003 0.023639 0.005594 0.558584 0.261674 962.93 963.84 1.000
alpha{3} 1.859873 1.130159 0.335977 3.985038 1.615574 1092.39 1180.60 1.000
pinvar{all} 0.468112 0.012011 0.254044 0.675947 0.486371 630.22 639.97 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C11
4 -- C12
5 -- C13
6 -- C14
7 -- C15
8 -- C16
9 -- C17
10 -- C18
11 -- C19
12 -- C2
13 -- C20
14 -- C21
15 -- C22
16 -- C23
17 -- C24
18 -- C25
19 -- C26
20 -- C27
21 -- C3
22 -- C4
23 -- C5
24 -- C6
25 -- C7
26 -- C8
27 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
---------------------------------
1 -- .**************************
2 -- .*.........................
3 -- ..*........................
4 -- ...*.......................
5 -- ....*......................
6 -- .....*.....................
7 -- ......*....................
8 -- .......*...................
9 -- ........*..................
10 -- .........*.................
11 -- ..........*................
12 -- ...........*...............
13 -- ............*..............
14 -- .............*.............
15 -- ..............*............
16 -- ...............*...........
17 -- ................*..........
18 -- .................*.........
19 -- ..................*........
20 -- ...................*.......
21 -- ....................*......
22 -- .....................*.....
23 -- ......................*....
24 -- .......................*...
25 -- ........................*..
26 -- .........................*.
27 -- ..........................*
28 -- .*.*..*...*.*....*.**...***
29 -- .*******.**.***************
30 -- ..*....*.*...*.**.*....*...
31 -- .......*.*.............*...
32 -- ....*.........*............
33 -- .....*................*....
34 -- ..*..........*.**.*........
35 -- .............*..*.*........
36 -- ..*....*.*...*.**.*..*.*...
37 -- ..*.*..*.*...****.*..*.*...
38 -- ..*..........*..*.*........
39 -- ..*.**.*.*...****.*..***...
40 -- .*******.******************
41 -- .****.**.**.**********.****
42 -- .......*...............*...
43 -- .......*.*.................
44 -- .............*....*........
45 -- .............*..*..........
46 -- ................*.*........
47 -- .........*.............*...
48 -- ........*..*...............
49 -- .**********.***************
---------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
28 3002 1.000000 0.000000 1.000000 1.000000 2
29 3002 1.000000 0.000000 1.000000 1.000000 2
30 3002 1.000000 0.000000 1.000000 1.000000 2
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 3002 1.000000 0.000000 1.000000 1.000000 2
33 3002 1.000000 0.000000 1.000000 1.000000 2
34 2988 0.995336 0.001884 0.994004 0.996669 2
35 2925 0.974350 0.001413 0.973351 0.975350 2
36 2775 0.924384 0.000471 0.924051 0.924717 2
37 2669 0.889074 0.005182 0.885410 0.892738 2
38 2635 0.877748 0.006124 0.873418 0.882079 2
39 1799 0.599267 0.017430 0.586942 0.611592 2
40 1688 0.562292 0.008480 0.556296 0.568288 2
41 1051 0.350100 0.007066 0.345103 0.355097 2
42 1050 0.349767 0.002827 0.347768 0.351765 2
43 1008 0.335776 0.011306 0.327781 0.343771 2
44 998 0.332445 0.025439 0.314457 0.350433 2
45 990 0.329780 0.023555 0.313125 0.346436 2
46 978 0.325783 0.002827 0.323784 0.327781 2
47 944 0.314457 0.008480 0.308461 0.320453 2
48 717 0.238841 0.002355 0.237175 0.240506 2
49 597 0.198867 0.010835 0.191206 0.206529 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.002616 0.000004 0.000096 0.006262 0.002219 1.000 2
length{all}[2] 0.001349 0.000002 0.000000 0.004229 0.000892 1.000 2
length{all}[3] 0.001373 0.000002 0.000001 0.004168 0.000926 1.000 2
length{all}[4] 0.001294 0.000002 0.000001 0.003746 0.000919 1.000 2
length{all}[5] 0.009450 0.000014 0.002779 0.016452 0.008951 1.002 2
length{all}[6] 0.033970 0.000083 0.018339 0.052614 0.032926 1.000 2
length{all}[7] 0.006690 0.000009 0.001660 0.012645 0.006295 1.001 2
length{all}[8] 0.001316 0.000002 0.000000 0.003882 0.000909 1.000 2
length{all}[9] 0.001309 0.000002 0.000000 0.003883 0.000903 1.002 2
length{all}[10] 0.002614 0.000004 0.000027 0.006184 0.002197 1.000 2
length{all}[11] 0.001310 0.000002 0.000000 0.003951 0.000896 1.000 2
length{all}[12] 0.011742 0.000018 0.004102 0.020196 0.011303 1.000 2
length{all}[13] 0.001275 0.000002 0.000001 0.003819 0.000866 1.000 2
length{all}[14] 0.001304 0.000002 0.000000 0.004027 0.000878 1.000 2
length{all}[15] 0.001346 0.000002 0.000001 0.004262 0.000893 1.000 2
length{all}[16] 0.001480 0.000002 0.000002 0.004381 0.001014 1.000 2
length{all}[17] 0.001353 0.000002 0.000001 0.004068 0.000926 1.001 2
length{all}[18] 0.001281 0.000002 0.000000 0.003803 0.000892 1.000 2
length{all}[19] 0.001291 0.000002 0.000000 0.003919 0.000861 1.000 2
length{all}[20] 0.001336 0.000002 0.000000 0.003922 0.000935 1.000 2
length{all}[21] 0.001323 0.000002 0.000000 0.003910 0.000917 1.002 2
length{all}[22] 0.010542 0.000021 0.002905 0.019516 0.010056 1.000 2
length{all}[23] 0.036295 0.000088 0.018351 0.054095 0.035552 1.000 2
length{all}[24] 0.001294 0.000002 0.000000 0.003674 0.000895 1.000 2
length{all}[25] 0.001325 0.000002 0.000001 0.003985 0.000908 1.001 2
length{all}[26] 0.001313 0.000002 0.000000 0.004025 0.000896 1.000 2
length{all}[27] 0.001331 0.000002 0.000000 0.004131 0.000898 1.002 2
length{all}[28] 0.013411 0.000028 0.003980 0.023677 0.012765 1.000 2
length{all}[29] 0.039817 0.000102 0.022237 0.060566 0.038855 1.000 2
length{all}[30] 0.011073 0.000024 0.002846 0.020843 0.010360 1.000 2
length{all}[31] 0.031639 0.000066 0.016802 0.047877 0.030847 1.000 2
length{all}[32] 0.011673 0.000025 0.002571 0.021029 0.011020 1.000 2
length{all}[33] 0.042790 0.000108 0.024105 0.064765 0.041793 1.001 2
length{all}[34] 0.008627 0.000018 0.001279 0.016659 0.007884 1.000 2
length{all}[35] 0.002643 0.000004 0.000160 0.006340 0.002196 1.000 2
length{all}[36] 0.007932 0.000016 0.001058 0.015466 0.007267 1.000 2
length{all}[37] 0.007135 0.000016 0.000125 0.014988 0.006464 1.000 2
length{all}[38] 0.002583 0.000004 0.000017 0.006348 0.002116 1.002 2
length{all}[39] 0.006142 0.000016 0.000077 0.013494 0.005407 0.999 2
length{all}[40] 0.002339 0.000004 0.000002 0.006252 0.001787 1.000 2
length{all}[41] 0.008370 0.000029 0.000043 0.018391 0.007541 1.000 2
length{all}[42] 0.001330 0.000002 0.000002 0.004232 0.000848 0.999 2
length{all}[43] 0.001316 0.000002 0.000000 0.003936 0.000881 1.000 2
length{all}[44] 0.001317 0.000002 0.000000 0.003997 0.000875 1.000 2
length{all}[45] 0.001350 0.000002 0.000003 0.003951 0.000940 0.999 2
length{all}[46] 0.001288 0.000002 0.000000 0.003841 0.000947 1.000 2
length{all}[47] 0.001342 0.000002 0.000001 0.003976 0.000911 1.000 2
length{all}[48] 0.001326 0.000002 0.000000 0.003831 0.000959 1.002 2
length{all}[49] 0.001271 0.000002 0.000001 0.003877 0.000867 1.001 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.006167
Maximum standard deviation of split frequencies = 0.025439
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.002
Clade credibility values:
/---------------------------------------------------------------------- C1 (1)
|
|---------------------------------------------------------------------- C17 (9)
|
| /------- C10 (2)
| |
| |------- C12 (4)
| |
| |------- C15 (7)
| |
| |------- C19 (11)
| |
| |------- C20 (13)
| |
| /-----------------------100----------------------+------- C25 (18)
| | |
| | |------- C27 (20)
| | |
| | |------- C3 (21)
| | |
| | |------- C7 (25)
+ | |
| | |------- C8 (26)
| | |
| | \------- C9 (27)
| |
| | /-------------- C11 (3)
| | |
| | /--88--+ /------- C21 (14)
| | | | |
| /--100-+ | \--97--+------- C24 (17)
| | | /--100-+ |
| | | | | \------- C26 (19)
| | | | |
| | | | \--------------------- C23 (16)
| | | /--100-+
| | | | | /------- C16 (8)
| | | | | |
| | | | \---------100--------+------- C18 (10)
| | | /--92--+ |
| | | | | \------- C6 (24)
\--56--+ | | |
| | /--89--+ \----------------------------------- C4 (22)
| | | |
| | | | /------- C13 (5)
| | | \----------------100---------------+
| \--60--+ \------- C22 (15)
| |
| | /------- C14 (6)
| \-------------------100-------------------+
| \------- C5 (23)
|
\--------------------------------------------------------------- C2 (12)
Phylogram (based on average branch lengths):
/- C1 (1)
|
|- C17 (9)
|
| / C10 (2)
| |
| | C12 (4)
| |
| |--- C15 (7)
| |
| | C19 (11)
| |
| | C20 (13)
| |
| /-------+ C25 (18)
| | |
| | | C27 (20)
| | |
| | | C3 (21)
| | |
| | | C7 (25)
+ | |
| | | C8 (26)
| | |
| | \ C9 (27)
| |
| | /- C11 (3)
| | |
| | /+/- C21 (14)
| | |||
|/---------------------+ |\+- C24 (17)
|| | /----+ |
|| | | | \- C26 (19)
|| | | |
|| | | \ C23 (16)
|| | /-----+
|| | | | /- C16 (8)
|| | | | |
|| | | \-----------------+- C18 (10)
|| | /---+ |
|| | | | \- C6 (24)
\+ | | |
| | /---+ \------ C4 (22)
| | | |
| | | | /----- C13 (5)
| | | \------+
| \--+ \ C22 (15)
| |
| | /------------------ C14 (6)
| \------------------------+
| \-------------------- C5 (23)
|
\------- C2 (12)
|----------| 0.020 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Wed Nov 02 20:11:36 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.07 sec, SCORE=1000, Nseq=27, Len=247
C1 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C2 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C3 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C4 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C5 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKAK
C6 MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK
C7 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C8 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C9 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C10 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C11 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C12 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C13 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C14 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKAK
C15 ---MGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK
C16 MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK
C17 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C18 MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK
C19 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C20 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C21 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C22 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C23 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C24 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C25 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C26 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
C27 MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK
**************************.******************.*
C1 GRTLVNHVRVDCSRLPALECCVQSAIIRDIFVDKDPQKVEASTMMALQFG
C2 GRTLVNHVRVDYSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C3 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C4 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C5 GTSLANHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C6 GKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFG
C7 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C8 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C9 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C10 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C11 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C12 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C13 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C14 GTSLANHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVESSTMMALQFG
C15 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C16 GKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFG
C17 GRTLVNHVRVDCSRLPALECCVQSAIIRDIFVDKDPQKVEASTMMALQFG
C18 GKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFG
C19 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C20 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C21 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C22 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C23 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C24 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C25 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C26 GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
C27 GKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG
* :* *****: *********************:** :**:*********
C1 SAVLIMPSKRLSIQAWANLGVLPRTPAMGLFKRVCLCNTRGCSCDVHVAF
C2 SAVLIMPSKRLSIQAWANLGVLPRTPAMGLFKRVCLCNTRGCSCDVHVAF
C3 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C4 SAVLVKPSKRLSIQAWANLGVLPKTAAMGLFKRLCLCNTRECVCDAHVAF
C5 SAVLVKPSKRLSIQAWANLGVLPKTPAMGLFKRYCLCNTRECSCDAHVAF
C6 SAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C7 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C8 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C9 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C10 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C11 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C12 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C13 SAVLVKPSKRLSIQAWAKLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C14 SAVLVKPSKRLSIQAWANLGVLPKTHAMGLFKRYCLCNTRGCSCDAHVAF
C15 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C16 SAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C17 SAVLIMPSKRLSIQAWANLGVLPRTPAMGLFKRVCLCNTRGCSCDVHVAF
C18 SAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C19 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C20 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C21 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C22 SAVLVKPSKRLSIQAWAKLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C23 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C24 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C25 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
C26 SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF
C27 SAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAF
****: ******:***::*****:* ******* ****** * **.****
C1 QLFTVQPDGVWLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C2 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C3 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C4 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C5 QLFMVQPDGVCLGNGRFIGWFVPATAVPEYAKQWLQPWSILLRKGGNKGS
C6 QLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGS
C7 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C8 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C9 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C10 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C11 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C12 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C13 QLFTVQPDGVCLGNGRLIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C14 QLFMVQPDGVCLGNGRFIGWFVPTTAIPEYAKQWLQPWSILLRKGGNKGS
C15 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C16 QLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGS
C17 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C18 QLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGS
C19 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C20 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C21 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRRGGNKGS
C22 QLFTVQPDGVCLGNGRLIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C23 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C24 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRRGGNKGS
C25 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
C26 QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRRGGNKGS
C27 HLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS
:** ****** *****:******.**:* **************:******
C1 VTSGH-RRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYTLLKGYRG
C2 VTSGH-RRAVTMPVYHFNVEDACEEVHLNPKSEYSRKAYTLLKGYRG
C3 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C4 VTSGHFRRAVTMPVYDFNVEDACEEVYLNPKGKYSCKAYALLKGYRG
C5 VTSGHFRRAVTMPLYDFDVEDACEEVHLNPKGKYSRRAYTLLRGYRG
C6 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRG
C7 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C8 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C9 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C10 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C11 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C12 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C13 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPEEKYSCKAYRLLKGYRG
C14 VTFGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSSKAYALLKGYRG
C15 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C16 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRG
C17 VTSGH-RRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYTLLKGYRG
C18 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRG
C19 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C20 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C21 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C22 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C23 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C24 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C25 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
C26 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG
C27 VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
** ** *******:*.*:********:***. :** :** **:****
-- Starting log on Thu Nov 03 00:39:03 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/codeml,A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C1 741 sites
reading seq# 2 C2 741 sites
reading seq# 3 C3 741 sites
reading seq# 4 C4 741 sites
reading seq# 5 C5 741 sites
reading seq# 6 C6 741 sites
reading seq# 7 C7 741 sites
reading seq# 8 C8 741 sites
reading seq# 9 C9 741 sites
reading seq#10 C10 741 sites
reading seq#11 C11 741 sites
reading seq#12 C12 741 sites
reading seq#13 C13 741 sites
reading seq#14 C14 741 sites
reading seq#15 C15 741 sites
reading seq#16 C16 741 sites
reading seq#17 C17 741 sites
reading seq#18 C18 741 sites
reading seq#19 C19 741 sites
reading seq#20 C20 741 sites
reading seq#21 C21 741 sites
reading seq#22 C22 741 sites
reading seq#23 C23 741 sites
reading seq#24 C24 741 sites
reading seq#25 C25 741 sites
reading seq#26 C26 741 sites
reading seq#27 C27 741 sitesns = 27 ls = 741
Reading sequences, sequential format..
Reading seq # 1: C1
Reading seq # 2: C2
Reading seq # 3: C3
Reading seq # 4: C4
Reading seq # 5: C5
Reading seq # 6: C6
Reading seq # 7: C7
Reading seq # 8: C8
Reading seq # 9: C9
Reading seq #10: C10
Reading seq #11: C11
Reading seq #12: C12
Reading seq #13: C13
Reading seq #14: C14
Reading seq #15: C15
Reading seq #16: C16
Reading seq #17: C17
Reading seq #18: C18
Reading seq #19: C19
Reading seq #20: C20
Reading seq #21: C21
Reading seq #22: C22
Reading seq #23: C23
Reading seq #24: C24
Reading seq #25: C25
Reading seq #26: C26
Reading seq #27: C27
Sites with gaps or missing data are removed.
3 ambiguity characters in seq. 1
3 ambiguity characters in seq. 2
9 ambiguity characters in seq. 15
3 ambiguity characters in seq. 17
4 sites are removed. 1 2 3 206
Sequences read..
Counting site patterns.. 0:00
Compressing, 151 patterns at 243 / 243 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 151 patterns at 243 / 243 sites (100.0%), 0:00
Counting codons..
2808 bytes for distance
147376 bytes for conP
13288 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(1, 17, (((10, 12, 15, 19, 20, 25, 27, 3, 7, 8, 9), ((((((11, (21, 24, 26)), 23), (16, 18, 6)), 4), (13, 22)), (14, 5))), 2)); MP score: 163
1031632 bytes for conP, adjusted
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
30
0.034807 0.033007 0.076561 0.017791 0.037204 0.057356 0.108787 0.058612 0.078261 0.058837 0.023613 0.073446 0.032632 0.075085 0.081294 0.023327 0.070006 0.091473 0.076378 0.104097 0.011627 0.099601 0.082845 0.010122 0.033969 0.100222 0.083122 0.069780 0.061773 0.099036 0.010688 0.038672 0.067628 0.018790 0.010927 0.011479 0.070279 0.026133 0.099934 0.088411 0.300000 0.855415 0.283227
ntime & nrate & np: 40 2 43
Bounds (np=43):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 16.631834
np = 43
lnL0 = -2479.264728
Iterating by ming2
Initial: fx= 2479.264728
x= 0.03481 0.03301 0.07656 0.01779 0.03720 0.05736 0.10879 0.05861 0.07826 0.05884 0.02361 0.07345 0.03263 0.07509 0.08129 0.02333 0.07001 0.09147 0.07638 0.10410 0.01163 0.09960 0.08284 0.01012 0.03397 0.10022 0.08312 0.06978 0.06177 0.09904 0.01069 0.03867 0.06763 0.01879 0.01093 0.01148 0.07028 0.02613 0.09993 0.08841 0.30000 0.85541 0.28323
1 h-m-p 0.0000 0.0001 1643.7748 ++ 2376.030220 m 0.0001 48 | 1/43
2 h-m-p 0.0000 0.0000 1908.7878 ++ 2311.410848 m 0.0000 94 | 2/43
3 h-m-p 0.0000 0.0000 15999.1714 ++ 2309.959178 m 0.0000 140 | 3/43
4 h-m-p 0.0000 0.0000 10795.6595 ++ 2270.954368 m 0.0000 186 | 4/43
5 h-m-p 0.0000 0.0000 116223.7816 ++ 2268.517311 m 0.0000 232 | 5/43
6 h-m-p 0.0000 0.0000 14022.4776 ++ 2266.517094 m 0.0000 278 | 6/43
7 h-m-p 0.0000 0.0000 2861.0469 ++ 2247.241232 m 0.0000 324 | 7/43
8 h-m-p 0.0000 0.0000 4267.9347 ++ 2184.717093 m 0.0000 370 | 8/43
9 h-m-p 0.0000 0.0000 13848.4890 ++ 2180.056406 m 0.0000 416 | 9/43
10 h-m-p 0.0000 0.0000 22137.3526 ++ 2147.843794 m 0.0000 462 | 10/43
11 h-m-p 0.0000 0.0000 12611.7769 ++ 2139.530036 m 0.0000 508 | 11/43
12 h-m-p 0.0000 0.0000 12961.6876 ++ 2135.900849 m 0.0000 554 | 12/43
13 h-m-p 0.0000 0.0000 25178.5402 ++ 2129.582282 m 0.0000 600 | 13/43
14 h-m-p 0.0000 0.0000 6659.2088 ++ 2124.144136 m 0.0000 646 | 14/43
15 h-m-p 0.0000 0.0000 3213.1728 ++ 2122.234193 m 0.0000 692 | 15/43
16 h-m-p 0.0000 0.0000 5991.7545 ++ 2121.689174 m 0.0000 738 | 16/43
17 h-m-p 0.0000 0.0000 2764.4881 ++ 2105.084153 m 0.0000 784 | 17/43
18 h-m-p 0.0000 0.0000 1541.7650 ++ 2104.364470 m 0.0000 830 | 18/43
19 h-m-p 0.0000 0.0000 1104.1759 ++ 2100.489629 m 0.0000 876 | 19/43
20 h-m-p 0.0000 0.0002 446.6366 ++ 2091.420243 m 0.0002 922 | 19/43
21 h-m-p 0.0000 0.0000 302.8450 CC 2091.415289 1 0.0000 970 | 19/43
22 h-m-p 0.0000 0.0000 6056.2450 +YYCYCCC 2087.556669 6 0.0000 1026 | 19/43
23 h-m-p 0.0000 0.0001 504.0699 +YCYCCC 2083.942014 5 0.0001 1081 | 19/43
24 h-m-p 0.0001 0.0004 174.0620 CCCC 2082.310820 3 0.0001 1133 | 19/43
25 h-m-p 0.0001 0.0004 150.4368 YCCCC 2080.554536 4 0.0002 1186 | 19/43
26 h-m-p 0.0002 0.0008 95.4391 +YCYCCC 2076.900835 5 0.0005 1241 | 19/43
27 h-m-p 0.0001 0.0004 382.0329 +YYCCCC 2069.695535 5 0.0003 1296 | 19/43
28 h-m-p 0.0004 0.0019 72.8162 CCCC 2068.028427 3 0.0005 1348 | 19/43
29 h-m-p 0.0003 0.0017 42.0480 CCCC 2066.877755 3 0.0006 1400 | 19/43
30 h-m-p 0.0004 0.0046 69.0821 YCCC 2065.260403 3 0.0007 1451 | 19/43
31 h-m-p 0.0015 0.0076 18.0115 YCCC 2062.741846 3 0.0033 1502 | 19/43
32 h-m-p 0.0028 0.0140 5.7061 +YCYCC 2060.647378 4 0.0081 1555 | 19/43
33 h-m-p 0.0143 0.0716 1.9668 CYCCC 2056.840902 4 0.0269 1608 | 19/43
34 h-m-p 0.0042 0.0208 1.9056 +YYYYYYCCCC 2052.553273 9 0.0169 1667 | 19/43
35 h-m-p 0.0075 0.0377 2.5255 YCYCCC 2048.728255 5 0.0188 1721 | 19/43
36 h-m-p 0.0340 0.1698 0.6546 +YYCCC 2038.800087 4 0.1210 1774 | 19/43
37 h-m-p 0.0124 0.0620 2.0906 +YYCCCC 2028.618345 5 0.0411 1853 | 19/43
38 h-m-p 0.0135 0.0676 2.2530 +YYCCCC 2016.343468 5 0.0425 1908 | 19/43
39 h-m-p 0.0927 0.4637 0.7395 YCCCC 2010.039540 4 0.1740 1961 | 19/43
40 h-m-p 0.0359 0.1797 1.0767 YCCCCC 2003.372675 5 0.0825 2040 | 19/43
41 h-m-p 0.1135 1.9627 0.7828 +YCCCC 1992.022537 4 0.2885 2094 | 19/43
42 h-m-p 0.1757 0.8786 0.3622 YCCC 1988.286381 3 0.3845 2169 | 19/43
43 h-m-p 0.0659 0.3293 0.9222 +YCYCCC 1983.825036 5 0.1809 2248 | 19/43
44 h-m-p 0.2141 1.0706 0.6985 +YCCC 1974.425299 3 0.6540 2324 | 19/43
45 h-m-p 0.3276 1.6379 0.3462 +YYC 1969.495734 2 0.9551 2397 | 19/43
46 h-m-p 0.5269 2.6347 0.1657 +YYYCCC 1966.810324 5 1.8995 2475 | 19/43
47 h-m-p 0.4473 2.2365 0.2646 CCC 1965.852467 2 0.5300 2549 | 19/43
48 h-m-p 0.7284 3.6422 0.1452 YCCC 1964.693810 3 1.6318 2624 | 19/43
49 h-m-p 0.9087 4.5434 0.0945 YCC 1964.111434 2 1.6448 2697 | 19/43
50 h-m-p 1.6000 8.0000 0.0696 YCCC 1963.484145 3 2.8942 2772 | 19/43
51 h-m-p 1.6000 8.0000 0.0646 CCC 1963.067748 2 1.4526 2846 | 19/43
52 h-m-p 0.9009 8.0000 0.1041 CCC 1962.842412 2 1.4452 2920 | 19/43
53 h-m-p 1.6000 8.0000 0.0425 CC 1962.770512 1 1.6712 2992 | 19/43
54 h-m-p 1.6000 8.0000 0.0151 CC 1962.753058 1 1.2649 3064 | 19/43
55 h-m-p 1.6000 8.0000 0.0031 CC 1962.742069 1 2.1554 3136 | 19/43
56 h-m-p 0.9067 8.0000 0.0074 ++ 1962.709391 m 8.0000 3206 | 19/43
57 h-m-p 1.6000 8.0000 0.0077 YC 1962.628900 1 3.5264 3277 | 19/43
58 h-m-p 1.6000 8.0000 0.0111 +YC 1962.486319 1 4.8749 3349 | 19/43
59 h-m-p 1.6000 8.0000 0.0288 +CC 1962.196316 1 6.0388 3422 | 19/43
60 h-m-p 1.6000 8.0000 0.0166 YCCC 1961.999491 3 2.9886 3497 | 19/43
61 h-m-p 1.6000 8.0000 0.0041 CCC 1961.936547 2 2.0975 3571 | 19/43
62 h-m-p 0.7814 8.0000 0.0110 YC 1961.921684 1 1.8599 3642 | 19/43
63 h-m-p 1.6000 8.0000 0.0053 CC 1961.918247 1 2.2729 3714 | 19/43
64 h-m-p 1.6000 8.0000 0.0025 C 1961.917293 0 1.8319 3784 | 19/43
65 h-m-p 1.6000 8.0000 0.0003 YC 1961.916705 1 3.0159 3855 | 19/43
66 h-m-p 0.5104 8.0000 0.0016 +YC 1961.916272 1 3.7919 3927 | 19/43
67 h-m-p 1.6000 8.0000 0.0006 +C 1961.915289 0 6.1656 3998 | 19/43
68 h-m-p 1.6000 8.0000 0.0016 ++ 1961.910593 m 8.0000 4068 | 19/43
69 h-m-p 1.6000 8.0000 0.0008 ++ 1961.882114 m 8.0000 4138 | 19/43
70 h-m-p 0.4373 8.0000 0.0155 ++YC 1961.718725 1 7.3534 4211 | 19/43
71 h-m-p 1.6000 8.0000 0.0193 +YC 1961.398330 1 4.3462 4283 | 19/43
72 h-m-p 1.4135 7.0673 0.0218 YCCCC 1960.990452 4 2.9856 4360 | 19/43
73 h-m-p 0.5972 8.0000 0.1090 +YC 1960.800477 1 1.5111 4432 | 19/43
74 h-m-p 1.4129 7.0643 0.0174 CCCC 1960.675068 3 1.7815 4508 | 19/43
75 h-m-p 1.6000 8.0000 0.0068 CCC 1960.640478 2 2.3930 4582 | 19/43
76 h-m-p 1.4098 8.0000 0.0115 YC 1960.624183 1 2.2491 4653 | 19/43
77 h-m-p 1.6000 8.0000 0.0090 YC 1960.622961 1 1.2667 4724 | 19/43
78 h-m-p 1.6000 8.0000 0.0004 Y 1960.622938 0 1.1524 4794 | 19/43
79 h-m-p 1.6000 8.0000 0.0001 Y 1960.622938 0 1.2394 4864 | 19/43
80 h-m-p 1.6000 8.0000 0.0000 C 1960.622938 0 1.6777 4934 | 19/43
81 h-m-p 1.6000 8.0000 0.0000 Y 1960.622938 0 1.0923 5004 | 19/43
82 h-m-p 0.9671 8.0000 0.0000 -C 1960.622938 0 0.0604 5075 | 19/43
83 h-m-p 0.0295 8.0000 0.0000 Y 1960.622938 0 0.0074 5145 | 19/43
84 h-m-p 0.0160 8.0000 0.0127 -------------.. | 19/43
85 h-m-p 0.0047 2.3371 0.0039 ------------ | 19/43
86 h-m-p 0.0047 2.3371 0.0039 ------------
Out..
lnL = -1960.622938
5387 lfun, 16161 eigenQcodon, 430960 P(t)
end of tree file.
Time used: 2:50
Model 2: PositiveSelection
TREE # 1
(1, 17, (((10, 12, 15, 19, 20, 25, 27, 3, 7, 8, 9), ((((((11, (21, 24, 26)), 23), (16, 18, 6)), 4), (13, 22)), (14, 5))), 2)); MP score: 163
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
30
0.075966 0.107185 0.065196 0.016494 0.013201 0.026463 0.061490 0.094142 0.042527 0.021698 0.075371 0.030565 0.099014 0.029318 0.089694 0.071383 0.090785 0.050184 0.109165 0.039384 0.018953 0.098269 0.031017 0.020838 0.053325 0.055480 0.051908 0.054069 0.043553 0.068583 0.078246 0.093709 0.020418 0.099144 0.082113 0.099065 0.016950 0.012438 0.019987 0.070053 3.567944 0.840417 0.381327 0.485749 1.349734
ntime & nrate & np: 40 3 45
Bounds (np=45):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 4.016519
np = 45
lnL0 = -2474.732360
Iterating by ming2
Initial: fx= 2474.732360
x= 0.07597 0.10718 0.06520 0.01649 0.01320 0.02646 0.06149 0.09414 0.04253 0.02170 0.07537 0.03056 0.09901 0.02932 0.08969 0.07138 0.09079 0.05018 0.10917 0.03938 0.01895 0.09827 0.03102 0.02084 0.05333 0.05548 0.05191 0.05407 0.04355 0.06858 0.07825 0.09371 0.02042 0.09914 0.08211 0.09906 0.01695 0.01244 0.01999 0.07005 3.56794 0.84042 0.38133 0.48575 1.34973
1 h-m-p 0.0000 0.0001 2635.6229 ++ 2256.376160 m 0.0001 95 | 1/45
2 h-m-p 0.0000 0.0000 1200.4636 ++ 2232.256314 m 0.0000 188 | 2/45
3 h-m-p 0.0000 0.0000 333101796.8119
h-m-p: 8.34948684e-12 4.17474342e-11 3.33101797e+08 2232.256314
.. | 2/45
4 h-m-p 0.0000 0.0000 1001.5255 ++ 2218.382891 m 0.0000 368 | 3/45
5 h-m-p 0.0000 0.0000 133755.4683 ++ 2212.399211 m 0.0000 459 | 4/45
6 h-m-p 0.0000 0.0000 7719.9839 ++ 2209.453382 m 0.0000 549 | 5/45
7 h-m-p 0.0000 0.0000 8784.5434 ++ 2161.678362 m 0.0000 638 | 6/45
8 h-m-p 0.0000 0.0000 7196.9905 ++ 2126.801109 m 0.0000 726 | 7/45
9 h-m-p 0.0000 0.0000 5247.5805 ++ 2122.334812 m 0.0000 813 | 8/45
10 h-m-p 0.0000 0.0000 13675.4144 ++ 2116.470373 m 0.0000 899 | 9/45
11 h-m-p 0.0000 0.0000 21367.5227 ++ 2116.304312 m 0.0000 984 | 10/45
12 h-m-p 0.0000 0.0000 149011.6076 ++ 2102.294756 m 0.0000 1068 | 11/45
13 h-m-p 0.0000 0.0000 39794.4392 ++ 2086.528839 m 0.0000 1151 | 12/45
14 h-m-p 0.0000 0.0000 20392.2556 ++ 2082.303467 m 0.0000 1233 | 13/45
15 h-m-p 0.0000 0.0000 20177.6941 ++ 2076.054534 m 0.0000 1314 | 14/45
16 h-m-p 0.0000 0.0000 8144.1959 ++ 2057.346533 m 0.0000 1394 | 15/45
17 h-m-p 0.0000 0.0000 10132.8598 ++ 2052.073979 m 0.0000 1473 | 16/45
18 h-m-p 0.0000 0.0000 5747.0262 ++ 2048.362172 m 0.0000 1551 | 17/45
19 h-m-p 0.0000 0.0000 3025.5831 ++ 2046.900967 m 0.0000 1628 | 18/45
20 h-m-p 0.0000 0.0000 1980.3817 ++ 2044.428389 m 0.0000 1704 | 19/45
21 h-m-p 0.0000 0.0003 322.6413 +++ 2032.323195 m 0.0003 1780 | 19/45
22 h-m-p 0.0000 0.0000 981.9722
h-m-p: 1.13920186e-20 5.69600928e-20 9.81972155e+02 2032.323195
.. | 19/45
23 h-m-p 0.0000 0.0001 423.3828 ++ 2023.629665 m 0.0001 1925 | 19/45
24 h-m-p 0.0000 0.0000 14342.4591 +YYYYCC 2021.297122 5 0.0000 2006 | 19/45
25 h-m-p 0.0000 0.0000 2264.8601 +YYCYYCCC 2014.537637 7 0.0000 2091 | 19/45
26 h-m-p 0.0000 0.0000 1415.4395 YCYCCC 2013.890759 5 0.0000 2173 | 19/45
27 h-m-p 0.0000 0.0000 2475.6833 +YCCCC 2011.267740 4 0.0000 2255 | 19/45
28 h-m-p 0.0000 0.0002 420.9051 CCCC 2009.260392 3 0.0001 2335 | 19/45
29 h-m-p 0.0001 0.0004 203.9410 YCCCC 2007.520809 4 0.0002 2416 | 19/45
30 h-m-p 0.0001 0.0007 375.5328 +YYCCC 2001.860001 4 0.0003 2497 | 19/45
31 h-m-p 0.0000 0.0002 544.5411 ++ 1993.123450 m 0.0002 2571 | 20/45
32 h-m-p 0.0001 0.0003 81.7476 +YCCC 1991.976833 3 0.0003 2651 | 20/45
33 h-m-p 0.0001 0.0003 224.3431 ++ 1989.305058 m 0.0003 2724 | 20/45
34 h-m-p -0.0000 -0.0000 147.7001
h-m-p: -8.79045044e-22 -4.39522522e-21 1.47700073e+02 1989.305058
.. | 20/45
35 h-m-p 0.0000 0.0006 17355.5743 -YYCYCYC 1985.441649 6 0.0000 2877 | 20/45
36 h-m-p 0.0000 0.0002 665.4458 YYYCCC 1984.204465 5 0.0000 2957 | 20/45
37 h-m-p 0.0000 0.0006 261.4528 +CCYC 1979.259358 3 0.0002 3036 | 20/45
38 h-m-p 0.0000 0.0001 238.2638 +YYCCC 1977.775723 4 0.0001 3116 | 20/45
39 h-m-p 0.0000 0.0000 192.5791 +CYC 1977.537442 2 0.0000 3193 | 20/45
40 h-m-p 0.0000 0.0008 124.4210 +YCCC 1977.098712 3 0.0001 3272 | 20/45
41 h-m-p 0.0000 0.0002 111.2434 CCCC 1976.909024 3 0.0001 3351 | 20/45
42 h-m-p 0.0001 0.0003 134.2519 +CYC 1976.311269 2 0.0002 3428 | 20/45
43 h-m-p 0.0003 0.0024 102.4117 CCC 1975.806272 2 0.0003 3505 | 20/45
44 h-m-p 0.0003 0.0035 98.2632 +YYCCC 1974.452562 4 0.0009 3585 | 20/45
45 h-m-p 0.0002 0.0015 430.1151 +YCCC 1970.434615 3 0.0007 3664 | 20/45
46 h-m-p 0.0001 0.0003 1204.2067 ++ 1966.368026 m 0.0003 3737 | 21/45
47 h-m-p 0.0001 0.0006 456.3301 CCCCC 1965.158373 4 0.0002 3818 | 21/45
48 h-m-p 0.0002 0.0010 175.4976 CCCC 1964.567818 3 0.0003 3896 | 20/45
49 h-m-p 0.0003 0.0027 172.2823 CCCC 1962.815812 3 0.0002 3974 | 19/45
50 h-m-p 0.0001 0.0010 451.3585 YCYCC 1962.630869 4 0.0000 4053 | 19/45
51 h-m-p 0.0001 0.0032 47.9506 YC 1962.508612 1 0.0003 4128 | 19/45
52 h-m-p 0.0006 0.0037 21.1244 CC 1962.484799 1 0.0002 4204 | 19/45
53 h-m-p 0.0009 0.0164 4.9577 C 1962.482356 0 0.0002 4278 | 19/45
54 h-m-p 0.0004 0.0486 2.8785 CC 1962.480475 1 0.0005 4354 | 19/45
55 h-m-p 0.0006 0.0646 2.3230 CC 1962.479322 1 0.0005 4430 | 19/45
56 h-m-p 0.0012 0.3965 0.9766 ++YC 1962.452974 1 0.0128 4507 | 19/45
57 h-m-p 0.0002 0.0099 58.5900 +YCC 1962.356337 2 0.0007 4585 | 19/45
58 h-m-p 0.0005 0.0047 90.2995 YCCC 1962.148121 3 0.0010 4664 | 19/45
59 h-m-p 0.0002 0.0044 477.8230 +CCC 1960.946989 2 0.0011 4743 | 19/45
60 h-m-p 0.1890 1.0675 2.6925 YCCC 1959.307092 3 0.4011 4822 | 19/45
61 h-m-p 1.4171 7.0854 0.5042 CCCC 1958.464267 3 1.0711 4902 | 19/45
62 h-m-p 1.6000 8.0000 0.2026 YC 1958.351326 1 0.7528 4977 | 19/45
63 h-m-p 0.9383 8.0000 0.1626 CCC 1958.286261 2 1.2954 5055 | 19/45
64 h-m-p 1.6000 8.0000 0.1252 YC 1958.271513 1 0.7823 5130 | 19/45
65 h-m-p 1.6000 8.0000 0.0282 YC 1958.264423 1 1.2447 5205 | 19/45
66 h-m-p 1.3936 8.0000 0.0252 +C 1958.246318 0 5.5383 5280 | 19/45
67 h-m-p 1.6000 8.0000 0.0866 YCCC 1958.204572 3 3.0968 5359 | 19/45
68 h-m-p 1.6000 8.0000 0.1327 CCC 1958.178315 2 1.6715 5437 | 19/45
69 h-m-p 1.6000 8.0000 0.0366 YCC 1958.168302 2 1.1370 5514 | 19/45
70 h-m-p 1.6000 8.0000 0.0107 CC 1958.164656 1 1.8695 5590 | 19/45
71 h-m-p 0.3756 8.0000 0.0530 ++YC 1958.157009 1 4.0301 5667 | 19/45
72 h-m-p 1.6000 8.0000 0.0687 CC 1958.153028 1 1.4083 5743 | 19/45
73 h-m-p 1.6000 8.0000 0.0197 CC 1958.152396 1 1.3417 5819 | 19/45
74 h-m-p 1.6000 8.0000 0.0122 Y 1958.152344 0 1.1377 5893 | 19/45
75 h-m-p 1.6000 8.0000 0.0020 Y 1958.152340 0 1.0669 5967 | 19/45
76 h-m-p 1.6000 8.0000 0.0006 Y 1958.152340 0 0.7953 6041 | 19/45
77 h-m-p 1.6000 8.0000 0.0001 Y 1958.152340 0 1.0471 6115 | 19/45
78 h-m-p 1.6000 8.0000 0.0000 C 1958.152340 0 1.6000 6189 | 19/45
79 h-m-p 1.2807 8.0000 0.0000 -----------Y 1958.152340 0 0.0000 6274
Out..
lnL = -1958.152340
6275 lfun, 25100 eigenQcodon, 753000 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -1966.839177 S = -1860.488527 -125.163921
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 151 patterns 7:46
did 20 / 151 patterns 7:46
did 30 / 151 patterns 7:46
did 40 / 151 patterns 7:46
did 50 / 151 patterns 7:46
did 60 / 151 patterns 7:46
did 70 / 151 patterns 7:46
did 80 / 151 patterns 7:46
did 90 / 151 patterns 7:47
did 100 / 151 patterns 7:47
did 110 / 151 patterns 7:47
did 120 / 151 patterns 7:47
did 130 / 151 patterns 7:47
did 140 / 151 patterns 7:47
did 150 / 151 patterns 7:47
did 151 / 151 patterns 7:47end of tree file.
Time used: 7:47
Model 7: beta
TREE # 1
(1, 17, (((10, 12, 15, 19, 20, 25, 27, 3, 7, 8, 9), ((((((11, (21, 24, 26)), 23), (16, 18, 6)), 4), (13, 22)), (14, 5))), 2)); MP score: 163
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
30
0.090281 0.035599 0.109999 0.022643 0.030654 0.084017 0.013391 0.090078 0.023833 0.067847 0.055284 0.024587 0.052720 0.033961 0.045799 0.023282 0.057941 0.047162 0.022920 0.100699 0.028980 0.058099 0.092015 0.013900 0.052634 0.097648 0.065649 0.022611 0.023479 0.058686 0.095877 0.082878 0.096037 0.101218 0.066210 0.047641 0.033333 0.091774 0.085423 0.022688 3.691904 0.915177 1.530208
ntime & nrate & np: 40 1 43
Bounds (np=43):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 6.277063
np = 43
lnL0 = -2329.286881
Iterating by ming2
Initial: fx= 2329.286881
x= 0.09028 0.03560 0.11000 0.02264 0.03065 0.08402 0.01339 0.09008 0.02383 0.06785 0.05528 0.02459 0.05272 0.03396 0.04580 0.02328 0.05794 0.04716 0.02292 0.10070 0.02898 0.05810 0.09202 0.01390 0.05263 0.09765 0.06565 0.02261 0.02348 0.05869 0.09588 0.08288 0.09604 0.10122 0.06621 0.04764 0.03333 0.09177 0.08542 0.02269 3.69190 0.91518 1.53021
1 h-m-p 0.0000 0.0001 1485.8504 ++ 2224.160883 m 0.0001 91 | 1/43
2 h-m-p 0.0000 0.0000 1818.3509 ++ 2177.147710 m 0.0000 180 | 2/43
3 h-m-p 0.0000 0.0000 7781.2280 ++ 2176.122017 m 0.0000 268 | 3/43
4 h-m-p 0.0000 0.0000 7223.9100 ++ 2173.330580 m 0.0000 355 | 4/43
5 h-m-p 0.0000 0.0000 725.9159 ++ 2168.714066 m 0.0000 441 | 5/43
6 h-m-p 0.0000 0.0001 809.8322 ++ 2117.315216 m 0.0001 526 | 6/43
7 h-m-p 0.0000 0.0000 1306.8304 ++ 2102.052984 m 0.0000 610 | 7/43
8 h-m-p 0.0000 0.0000 7150.0636 ++ 2070.430711 m 0.0000 693 | 8/43
9 h-m-p 0.0000 0.0000 8270.2195 ++ 2056.576029 m 0.0000 775 | 9/43
10 h-m-p 0.0000 0.0000 14147.1295 ++ 2048.525235 m 0.0000 856 | 10/43
11 h-m-p 0.0000 0.0000 15997.3251 ++ 2046.412515 m 0.0000 936 | 11/43
12 h-m-p 0.0000 0.0000 8378.8315 ++ 2042.660047 m 0.0000 1015 | 12/43
13 h-m-p 0.0000 0.0000 5844.9822 ++ 2031.009246 m 0.0000 1093 | 13/43
14 h-m-p 0.0000 0.0000 4354.2780 ++ 2021.991455 m 0.0000 1170 | 14/43
15 h-m-p 0.0000 0.0000 7685.1286 ++ 2020.435255 m 0.0000 1246 | 15/43
16 h-m-p 0.0000 0.0000 2939.8472 ++ 2001.285607 m 0.0000 1321 | 16/43
17 h-m-p 0.0000 0.0000 1301.2026 ++ 1999.472031 m 0.0000 1395 | 17/43
18 h-m-p 0.0000 0.0000 3047.2712 ++ 1991.852048 m 0.0000 1468 | 18/43
19 h-m-p 0.0000 0.0000 748.7465 ++ 1991.663777 m 0.0000 1540 | 19/43
20 h-m-p 0.0000 0.0005 103.2983 ++CYYCCC 1988.280164 5 0.0004 1622 | 19/43
21 h-m-p 0.0000 0.0002 138.2324 +CCYC 1985.722238 3 0.0002 1698 | 19/43
22 h-m-p 0.0002 0.0008 60.9288 YCCCC 1985.316931 4 0.0003 1775 | 19/43
23 h-m-p 0.0001 0.0008 168.0364 +YCCC 1984.166652 3 0.0003 1851 | 19/43
24 h-m-p 0.0002 0.0013 275.2246 +YCCC 1980.966691 3 0.0006 1927 | 19/43
25 h-m-p 0.0001 0.0006 291.5489 ++ 1977.784019 m 0.0006 1997 | 19/43
26 h-m-p 0.0002 0.0010 313.0654 YYCC 1976.952333 3 0.0002 2071 | 19/43
27 h-m-p 0.0025 0.0124 7.1705 CCC 1976.513068 2 0.0027 2145 | 19/43
28 h-m-p 0.0003 0.0013 51.7540 YYC 1976.323520 2 0.0002 2217 | 19/43
29 h-m-p 0.0024 0.0439 4.4869 +CCCC 1975.348458 3 0.0119 2294 | 19/43
30 h-m-p 0.0063 0.0315 6.8532 CCC 1974.727762 2 0.0073 2368 | 19/43
31 h-m-p 0.0266 0.1456 1.8678 YCCC 1972.816203 3 0.0505 2443 | 19/43
32 h-m-p 0.0338 0.1688 1.2701 YC 1971.381912 1 0.0844 2514 | 19/43
33 h-m-p 0.0221 0.1254 4.8487 CYC 1970.380647 2 0.0283 2587 | 19/43
34 h-m-p 0.0314 0.1568 4.1190 +YC 1969.019462 1 0.0801 2659 | 19/43
35 h-m-p 0.0621 0.3103 3.5112 CYCCC 1967.489362 4 0.1136 2736 | 19/43
36 h-m-p 0.0903 0.4514 2.0017 CYC 1964.504246 2 0.1956 2809 | 19/43
37 h-m-p 0.0608 0.3038 1.6708 YCYC 1963.704483 3 0.1433 2883 | 19/43
38 h-m-p 0.1692 0.8459 0.4377 CC 1962.993340 1 0.1849 2955 | 19/43
39 h-m-p 0.0774 0.3868 0.4650 CCCC 1962.406466 3 0.1003 3031 | 19/43
40 h-m-p 0.1590 1.2113 0.2935 CCCC 1962.212044 3 0.2333 3107 | 19/43
41 h-m-p 0.4233 4.3194 0.1618 CCC 1962.046185 2 0.3739 3181 | 19/43
42 h-m-p 0.8277 4.1386 0.0270 YC 1961.988808 1 0.3799 3252 | 19/43
43 h-m-p 0.1775 2.2711 0.0578 CC 1961.963520 1 0.1521 3324 | 19/43
44 h-m-p 0.2719 5.9816 0.0323 CC 1961.944444 1 0.4198 3396 | 19/43
45 h-m-p 1.6000 8.0000 0.0072 YC 1961.933953 1 0.8324 3467 | 19/43
46 h-m-p 0.4895 8.0000 0.0122 CC 1961.931922 1 0.6317 3539 | 19/43
47 h-m-p 1.5899 8.0000 0.0049 YC 1961.931084 1 0.8000 3610 | 19/43
48 h-m-p 1.6000 8.0000 0.0011 YC 1961.930917 1 1.0536 3681 | 19/43
49 h-m-p 0.7215 8.0000 0.0016 C 1961.930888 0 1.1189 3751 | 19/43
50 h-m-p 0.8026 8.0000 0.0022 C 1961.930882 0 0.7471 3821 | 19/43
51 h-m-p 1.6000 8.0000 0.0007 Y 1961.930879 0 0.9429 3891 | 19/43
52 h-m-p 1.6000 8.0000 0.0001 C 1961.930879 0 1.6000 3961 | 19/43
53 h-m-p 1.6000 8.0000 0.0000 Y 1961.930879 0 1.2540 4031 | 19/43
54 h-m-p 1.6000 8.0000 0.0000 Y 1961.930879 0 1.6000 4101 | 19/43
55 h-m-p 1.5401 8.0000 0.0000 Y 1961.930879 0 1.5401 4171 | 19/43
56 h-m-p 1.6000 8.0000 0.0000 Y 1961.930879 0 1.6000 4241 | 19/43
57 h-m-p 1.6000 8.0000 0.0000 --C 1961.930879 0 0.0250 4313 | 19/43
58 h-m-p 0.0160 8.0000 0.0001 -------Y 1961.930879 0 0.0000 4390
Out..
lnL = -1961.930879
4391 lfun, 48301 eigenQcodon, 1756400 P(t)
end of tree file.
Time used: 19:18
Model 8: beta&w>1
TREE # 1
(1, 17, (((10, 12, 15, 19, 20, 25, 27, 3, 7, 8, 9), ((((((11, (21, 24, 26)), 23), (16, 18, 6)), 4), (13, 22)), (14, 5))), 2)); MP score: 163
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
30
0.100427 0.101414 0.075260 0.054527 0.020349 0.076824 0.053585 0.070619 0.019046 0.104225 0.040848 0.066266 0.058219 0.063037 0.022537 0.046923 0.048319 0.041159 0.020581 0.043283 0.039432 0.040335 0.047862 0.096867 0.109339 0.075956 0.096611 0.067389 0.090925 0.019722 0.090382 0.047840 0.056131 0.108629 0.104283 0.048220 0.048640 0.018687 0.033158 0.083866 3.612013 0.900000 0.424799 1.668325 1.300000
ntime & nrate & np: 40 2 45
Bounds (np=45):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 6.952492
np = 45
lnL0 = -2332.735201
Iterating by ming2
Initial: fx= 2332.735201
x= 0.10043 0.10141 0.07526 0.05453 0.02035 0.07682 0.05358 0.07062 0.01905 0.10423 0.04085 0.06627 0.05822 0.06304 0.02254 0.04692 0.04832 0.04116 0.02058 0.04328 0.03943 0.04034 0.04786 0.09687 0.10934 0.07596 0.09661 0.06739 0.09093 0.01972 0.09038 0.04784 0.05613 0.10863 0.10428 0.04822 0.04864 0.01869 0.03316 0.08387 3.61201 0.90000 0.42480 1.66832 1.30000
1 h-m-p 0.0000 0.0001 1492.0948 ++ 2197.100026 m 0.0001 95 | 1/45
2 h-m-p 0.0000 0.0000 1436.0899 ++ 2192.940423 m 0.0000 188 | 2/45
3 h-m-p 0.0000 0.0000 586245.5339 ++ 2182.014955 m 0.0000 280 | 3/45
4 h-m-p 0.0000 0.0000 2221.2754 ++ 2113.560564 m 0.0000 371 | 4/45
5 h-m-p 0.0000 0.0000 28891.9501 ++ 2091.631165 m 0.0000 461 | 5/45
6 h-m-p 0.0000 0.0000 67357.4889 ++ 2085.011216 m 0.0000 550 | 6/45
7 h-m-p 0.0000 0.0000 2299.6026 ++ 2083.843473 m 0.0000 638 | 7/45
8 h-m-p 0.0000 0.0000 2922.2199 ++ 2082.363842 m 0.0000 725 | 8/45
9 h-m-p 0.0000 0.0000 20013.3517 ++ 2071.191580 m 0.0000 811 | 9/45
10 h-m-p 0.0000 0.0000 276073.1830 ++ 2058.882841 m 0.0000 896 | 10/45
11 h-m-p 0.0000 0.0000 14993.1662 ++ 2047.655720 m 0.0000 980 | 11/45
12 h-m-p 0.0000 0.0000 25827.3930 ++ 2040.782323 m 0.0000 1063 | 12/45
13 h-m-p 0.0000 0.0000 9739.4356 ++ 2035.019814 m 0.0000 1145 | 13/45
14 h-m-p 0.0000 0.0000 8344.4192 ++ 2023.950442 m 0.0000 1226 | 14/45
15 h-m-p 0.0000 0.0000 5793.8136 ++ 2023.349894 m 0.0000 1306 | 15/45
16 h-m-p 0.0000 0.0000 4609.5325 ++ 2001.009648 m 0.0000 1385 | 16/45
17 h-m-p 0.0000 0.0000 2329.4720 ++ 1995.521939 m 0.0000 1463 | 17/45
18 h-m-p 0.0000 0.0000 2168.4211 ++ 1995.329356 m 0.0000 1540 | 18/45
19 h-m-p 0.0000 0.0000 873.6736 ++ 1993.561829 m 0.0000 1616 | 19/45
20 h-m-p 0.0000 0.0004 138.1509 ++YYYCYCCC 1980.870972 7 0.0003 1704 | 19/45
21 h-m-p 0.0000 0.0000 462.9855 +YCYCCC 1979.646573 5 0.0000 1787 | 19/45
22 h-m-p 0.0000 0.0000 509.4115 ++ 1978.026684 m 0.0000 1861 | 19/45
23 h-m-p 0.0000 0.0002 495.6709 +YYYYYC 1973.075542 5 0.0001 1941 | 19/45
24 h-m-p 0.0000 0.0001 152.5760 CCC 1972.938327 2 0.0000 2019 | 19/45
25 h-m-p 0.0000 0.0010 63.2795 +YCCC 1971.810221 3 0.0004 2099 | 19/45
26 h-m-p 0.0001 0.0005 122.3805 +YYYYCC 1969.105228 5 0.0004 2180 | 19/45
27 h-m-p 0.0001 0.0003 143.9392 YCYCCC 1968.355285 5 0.0002 2262 | 19/45
28 h-m-p 0.0002 0.0010 105.0325 CCCC 1967.805772 3 0.0002 2342 | 19/45
29 h-m-p 0.0002 0.0020 90.8628 +YYCC 1965.938048 3 0.0008 2421 | 19/45
30 h-m-p 0.0006 0.0028 76.9753 CCCCC 1964.750803 4 0.0008 2503 | 19/45
31 h-m-p 0.0007 0.0035 52.0709 YCY 1964.423164 2 0.0004 2580 | 19/45
32 h-m-p 0.0011 0.0059 19.2434 C 1964.070092 0 0.0011 2654 | 19/45
33 h-m-p 0.0013 0.0066 14.7616 CCCC 1963.317155 3 0.0016 2734 | 19/45
34 h-m-p 0.0015 0.0099 15.6335 YCCC 1962.285460 3 0.0031 2813 | 19/45
35 h-m-p 0.0117 0.0585 3.3396 CYC 1961.430412 2 0.0113 2890 | 19/45
36 h-m-p 0.0045 0.0226 4.8853 CCCC 1960.932925 3 0.0059 2970 | 19/45
37 h-m-p 0.0055 0.0700 5.2381 YC 1960.633811 1 0.0111 3045 | 19/45
38 h-m-p 0.0088 0.0994 6.6609 +YCCC 1960.194875 3 0.0224 3125 | 19/45
39 h-m-p 0.0561 0.3209 2.6577 CYYC 1959.853767 3 0.0543 3203 | 19/45
40 h-m-p 0.0424 0.5428 3.4014 CYC 1959.580559 2 0.0467 3280 | 19/45
41 h-m-p 0.0206 0.1360 7.7212 CCC 1959.295171 2 0.0222 3358 | 19/45
42 h-m-p 0.1166 0.6518 1.4715 CYC 1959.043400 2 0.1062 3435 | 19/45
43 h-m-p 0.2393 2.0736 0.6533 +YYC 1958.372354 2 0.7175 3512 | 19/45
44 h-m-p 1.2021 6.0107 0.2973 YC 1958.163632 1 0.6065 3587 | 19/45
45 h-m-p 0.5862 6.6202 0.3076 CCC 1957.940756 2 0.9388 3665 | 19/45
46 h-m-p 1.4546 8.0000 0.1985 YC 1957.860394 1 0.8813 3740 | 19/45
47 h-m-p 1.3191 8.0000 0.1326 YCC 1957.829968 2 0.8199 3817 | 19/45
48 h-m-p 1.6000 8.0000 0.0350 YC 1957.823371 1 0.9407 3892 | 19/45
49 h-m-p 1.4275 8.0000 0.0230 CC 1957.822063 1 1.1503 3968 | 19/45
50 h-m-p 1.6000 8.0000 0.0163 YC 1957.821828 1 0.6607 4043 | 19/45
51 h-m-p 1.6000 8.0000 0.0037 C 1957.821675 0 1.4288 4117 | 19/45
52 h-m-p 1.6000 8.0000 0.0009 C 1957.821642 0 1.7303 4191 | 19/45
53 h-m-p 1.6000 8.0000 0.0005 C 1957.821635 0 2.0786 4265 | 19/45
54 h-m-p 1.6000 8.0000 0.0003 C 1957.821633 0 1.2845 4339 | 19/45
55 h-m-p 1.6000 8.0000 0.0002 Y 1957.821633 0 1.2700 4413 | 19/45
56 h-m-p 1.6000 8.0000 0.0001 C 1957.821633 0 1.6000 4487 | 19/45
57 h-m-p 1.6000 8.0000 0.0000 C 1957.821633 0 1.6000 4561 | 19/45
58 h-m-p 1.6000 8.0000 0.0000 C 1957.821633 0 1.6000 4635 | 19/45
59 h-m-p 0.9259 8.0000 0.0000 +Y 1957.821633 0 3.7038 4710 | 19/45
60 h-m-p 1.6000 8.0000 0.0001 +Y 1957.821633 0 6.4000 4785 | 19/45
61 h-m-p 1.6000 8.0000 0.0003 Y 1957.821633 0 0.9716 4859 | 19/45
62 h-m-p 1.6000 8.0000 0.0000 Y 1957.821633 0 1.6000 4933 | 19/45
63 h-m-p 1.6000 8.0000 0.0000 ---C 1957.821633 0 0.0063 5010 | 19/45
64 h-m-p 0.0160 8.0000 0.0141 -C 1957.821633 0 0.0010 5085 | 19/45
65 h-m-p 1.4744 8.0000 0.0000 -----C 1957.821633 0 0.0004 5164 | 19/45
66 h-m-p 0.0160 8.0000 0.0000 ------Y 1957.821633 0 0.0000 5244
Out..
lnL = -1957.821633
5245 lfun, 62940 eigenQcodon, 2307800 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -1964.989706 S = -1860.538523 -135.159839
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 151 patterns 34:25
did 20 / 151 patterns 34:26
did 30 / 151 patterns 34:26
did 40 / 151 patterns 34:26
did 50 / 151 patterns 34:26
did 60 / 151 patterns 34:26
did 70 / 151 patterns 34:27
did 80 / 151 patterns 34:27
did 90 / 151 patterns 34:27
did 100 / 151 patterns 34:27
did 110 / 151 patterns 34:27
did 120 / 151 patterns 34:27
did 130 / 151 patterns 34:28
did 140 / 151 patterns 34:28
did 150 / 151 patterns 34:28
did 151 / 151 patterns 34:28end of tree file.
Time used: 34:28
The loglikelihoods for models M1, M2, M7 and M8 are -1960.622938 -1958.152340 -1961.930879 -1957.821633 respectively
The loglikelihood for model M8 is significantly different from that for M7. Twice the difference is 8.218492
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
8190_nsp1_VIPR_ALG4_381354069_183_920_1_NA_NA_Rat_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGRTLVNHVRV
681_nsp1_VIPR_ALG4_381354058_183_920_1_NA_NA_Rat_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGRTLVNHVRV
A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
MHV_1_nsp1_VIPR_ALG4_225403253_191_931_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
MHV_3_nsp1_VIPR_ALG4_225403263_187_927_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKAKGTSLANHVRV
MHV_2_nsp1_VIPR_ALG4_6625760_210_950_1_NA_NA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTKGKTLINHVRV
MHV_A59_ORF1ab_YP_009915688_1_NA_NA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
MHV_BHKR_lab_USA_icA59_17Cl1_2012_nsp1_VIPR_ALG4_530291001_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
MHV_BHKR_lab_USA_icA59_L94P_2012_nsp1_VIPR_ALG4_530291013_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
MHV_BHKR_lab_USA_icA59_ns2M_2012_nsp1_VIPR_ALG4_530291025_185_925_1_2012_10_25_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
MHV_JHM_IA_nsp1_VIPR_ALG4_225403289_190_930_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
MHV_BHKR_lab_USA_infA59_H126A_2012_nsp1_VIPR_ALG4_530290989_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
MHV_S_3239_17_nsp1_VIPR_ALG4_380706996_211_951_1_NA_NA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
MHV_MI_nsp1_VIPR_ALG4_293330423_169_909_1_1994_Australia_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKAKGTSLANHVRV
ML_10_nsp1_VIPR_ALG4_7769352_210_941_1_NA_NA_Unknown_Murine_coronavirus ---MGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTKGKTLVNHVRV
ML_11_nsp1_VIPR_ALG4_7739594_210_950_1_NA_NA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTKGKTLINHVRV
Parker_ORF1ab_YP_009924368_1_NA_NA_Rat_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGRTLVNHVRV
Penn_97_1_nsp1_VIPR_ALG4_7769341_210_950_1_NA_NA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTKGKTLINHVRV
RA59_SJHM_nsp1_VIPR_ALG4_225403223_171_911_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
RA59_R13_nsp1_VIPR_ALG4_225403197_187_927_1_2006_01_01_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
RJHM_A_nsp1_VIPR_ALG4_225403216_168_908_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
S_nsp1_VIPR_ALG4_298199703_211_951_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
UNKNOWN_AC_000192_nsp1_VIPR_ALG4_YP_209230_1_215_955_1_NA_NA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
SA59_RJHM_nsp1_VIPR_ALG4_225403245_168_908_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
inf_MHV_A59_nsp1_VIPR_ALG4_225403278_185_925_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
repJHM_RA59_nsp1_VIPR_ALG4_225403300_151_891_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
repA59_RJHM_nsp1_VIPR_ALG4_225403233_182_922_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRV
**************************.******************.** :* *****
8190_nsp1_VIPR_ALG4_381354069_183_920_1_NA_NA_Rat_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDKDPQKVEASTMMALQFGSAVLIMPSKRLSIQAWANLG
681_nsp1_VIPR_ALG4_381354058_183_920_1_NA_NA_Rat_Murine_coronavirus DYSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLIMPSKRLSIQAWANLG
A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus NCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLG
MHV_1_nsp1_VIPR_ALG4_225403253_191_931_1_NA_USA_Mouse_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWANLG
MHV_3_nsp1_VIPR_ALG4_225403263_187_927_1_NA_USA_Mouse_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWANLG
MHV_2_nsp1_VIPR_ALG4_6625760_210_950_1_NA_NA_Unknown_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFGSAVLVKPSKRLSIQAWAKLG
MHV_A59_ORF1ab_YP_009915688_1_NA_NA_Unknown_Murine_coronavirus NCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLG
MHV_BHKR_lab_USA_icA59_17Cl1_2012_nsp1_VIPR_ALG4_530291001_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus NCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLG
MHV_BHKR_lab_USA_icA59_L94P_2012_nsp1_VIPR_ALG4_530291013_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus NCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLG
MHV_BHKR_lab_USA_icA59_ns2M_2012_nsp1_VIPR_ALG4_530291025_185_925_1_2012_10_25_USA_Mouse_Murine_coronavirus NCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLG
MHV_JHM_IA_nsp1_VIPR_ALG4_225403289_190_930_1_NA_USA_Mouse_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSVQAWAKLG
MHV_BHKR_lab_USA_infA59_H126A_2012_nsp1_VIPR_ALG4_530290989_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus NCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLG
MHV_S_3239_17_nsp1_VIPR_ALG4_380706996_211_951_1_NA_NA_Unknown_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWAKLG
MHV_MI_nsp1_VIPR_ALG4_293330423_169_909_1_1994_Australia_Mouse_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPQKVESSTMMALQFGSAVLVKPSKRLSIQAWANLG
ML_10_nsp1_VIPR_ALG4_7769352_210_941_1_NA_NA_Unknown_Murine_coronavirus NCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLG
ML_11_nsp1_VIPR_ALG4_7739594_210_950_1_NA_NA_Unknown_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFGSAVLVKPSKRLSIQAWAKLG
Parker_ORF1ab_YP_009924368_1_NA_NA_Rat_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDKDPQKVEASTMMALQFGSAVLIMPSKRLSIQAWANLG
Penn_97_1_nsp1_VIPR_ALG4_7769341_210_950_1_NA_NA_Unknown_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFGSAVLVKPSKRLSIQAWAKLG
RA59_SJHM_nsp1_VIPR_ALG4_225403223_171_911_1_NA_USA_Mouse_Murine_coronavirus NCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLG
RA59_R13_nsp1_VIPR_ALG4_225403197_187_927_1_2006_01_01_USA_Mouse_Murine_coronavirus NCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLG
RJHM_A_nsp1_VIPR_ALG4_225403216_168_908_1_NA_USA_Mouse_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSVQAWAKLG
S_nsp1_VIPR_ALG4_298199703_211_951_1_NA_USA_Mouse_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWAKLG
UNKNOWN_AC_000192_nsp1_VIPR_ALG4_YP_209230_1_215_955_1_NA_NA_Unknown_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSVQAWAKLG
SA59_RJHM_nsp1_VIPR_ALG4_225403245_168_908_1_NA_USA_Mouse_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSVQAWAKLG
inf_MHV_A59_nsp1_VIPR_ALG4_225403278_185_925_1_NA_USA_Mouse_Murine_coronavirus NCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLG
repJHM_RA59_nsp1_VIPR_ALG4_225403300_151_891_1_NA_USA_Mouse_Murine_coronavirus DCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSVQAWAKLG
repA59_RJHM_nsp1_VIPR_ALG4_225403233_182_922_1_NA_USA_Mouse_Murine_coronavirus NCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLG
: *********************:** :**:*************: ******:***::**
8190_nsp1_VIPR_ALG4_381354069_183_920_1_NA_NA_Rat_Murine_coronavirus VLPRTPAMGLFKRVCLCNTRGCSCDVHVAFQLFTVQPDGVWLGNGRFIGWFVPVTAIPEY
681_nsp1_VIPR_ALG4_381354058_183_920_1_NA_NA_Rat_Murine_coronavirus VLPRTPAMGLFKRVCLCNTRGCSCDVHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
MHV_1_nsp1_VIPR_ALG4_225403253_191_931_1_NA_USA_Mouse_Murine_coronavirus VLPKTAAMGLFKRLCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
MHV_3_nsp1_VIPR_ALG4_225403263_187_927_1_NA_USA_Mouse_Murine_coronavirus VLPKTPAMGLFKRYCLCNTRECSCDAHVAFQLFMVQPDGVCLGNGRFIGWFVPATAVPEY
MHV_2_nsp1_VIPR_ALG4_6625760_210_950_1_NA_NA_Unknown_Murine_coronavirus VLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPAY
MHV_A59_ORF1ab_YP_009915688_1_NA_NA_Unknown_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
MHV_BHKR_lab_USA_icA59_17Cl1_2012_nsp1_VIPR_ALG4_530291001_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
MHV_BHKR_lab_USA_icA59_L94P_2012_nsp1_VIPR_ALG4_530291013_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
MHV_BHKR_lab_USA_icA59_ns2M_2012_nsp1_VIPR_ALG4_530291025_185_925_1_2012_10_25_USA_Mouse_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
MHV_JHM_IA_nsp1_VIPR_ALG4_225403289_190_930_1_NA_USA_Mouse_Murine_coronavirus VLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
MHV_BHKR_lab_USA_infA59_H126A_2012_nsp1_VIPR_ALG4_530290989_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
MHV_S_3239_17_nsp1_VIPR_ALG4_380706996_211_951_1_NA_NA_Unknown_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFQLFTVQPDGVCLGNGRLIGWFVPVTAIPEY
MHV_MI_nsp1_VIPR_ALG4_293330423_169_909_1_1994_Australia_Mouse_Murine_coronavirus VLPKTHAMGLFKRYCLCNTRGCSCDAHVAFQLFMVQPDGVCLGNGRFIGWFVPTTAIPEY
ML_10_nsp1_VIPR_ALG4_7769352_210_941_1_NA_NA_Unknown_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
ML_11_nsp1_VIPR_ALG4_7739594_210_950_1_NA_NA_Unknown_Murine_coronavirus VLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPAY
Parker_ORF1ab_YP_009924368_1_NA_NA_Rat_Murine_coronavirus VLPRTPAMGLFKRVCLCNTRGCSCDVHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
Penn_97_1_nsp1_VIPR_ALG4_7769341_210_950_1_NA_NA_Unknown_Murine_coronavirus VLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPAY
RA59_SJHM_nsp1_VIPR_ALG4_225403223_171_911_1_NA_USA_Mouse_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
RA59_R13_nsp1_VIPR_ALG4_225403197_187_927_1_2006_01_01_USA_Mouse_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
RJHM_A_nsp1_VIPR_ALG4_225403216_168_908_1_NA_USA_Mouse_Murine_coronavirus VLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
S_nsp1_VIPR_ALG4_298199703_211_951_1_NA_USA_Mouse_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFQLFTVQPDGVCLGNGRLIGWFVPVTAIPEY
UNKNOWN_AC_000192_nsp1_VIPR_ALG4_YP_209230_1_215_955_1_NA_NA_Unknown_Murine_coronavirus VLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
SA59_RJHM_nsp1_VIPR_ALG4_225403245_168_908_1_NA_USA_Mouse_Murine_coronavirus VLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
inf_MHV_A59_nsp1_VIPR_ALG4_225403278_185_925_1_NA_USA_Mouse_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
repJHM_RA59_nsp1_VIPR_ALG4_225403300_151_891_1_NA_USA_Mouse_Murine_coronavirus VLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
repA59_RJHM_nsp1_VIPR_ALG4_225403233_182_922_1_NA_USA_Mouse_Murine_coronavirus VLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEY
***:* ******* ****** * **.****:** ****** *****:******.**:* *
8190_nsp1_VIPR_ALG4_381354069_183_920_1_NA_NA_Rat_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGH-RRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYT
681_nsp1_VIPR_ALG4_381354058_183_920_1_NA_NA_Rat_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGH-RRAVTMPVYHFNVEDACEEVHLNPKSEYSRKAYT
A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYA
MHV_1_nsp1_VIPR_ALG4_225403253_191_931_1_NA_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVYLNPKGKYSCKAYA
MHV_3_nsp1_VIPR_ALG4_225403263_187_927_1_NA_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPLYDFDVEDACEEVHLNPKGKYSRRAYT
MHV_2_nsp1_VIPR_ALG4_6625760_210_950_1_NA_NA_Unknown_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYA
MHV_A59_ORF1ab_YP_009915688_1_NA_NA_Unknown_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYA
MHV_BHKR_lab_USA_icA59_17Cl1_2012_nsp1_VIPR_ALG4_530291001_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYA
MHV_BHKR_lab_USA_icA59_L94P_2012_nsp1_VIPR_ALG4_530291013_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYA
MHV_BHKR_lab_USA_icA59_ns2M_2012_nsp1_VIPR_ALG4_530291025_185_925_1_2012_10_25_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYA
MHV_JHM_IA_nsp1_VIPR_ALG4_225403289_190_930_1_NA_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYA
MHV_BHKR_lab_USA_infA59_H126A_2012_nsp1_VIPR_ALG4_530290989_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYA
MHV_S_3239_17_nsp1_VIPR_ALG4_380706996_211_951_1_NA_NA_Unknown_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPEEKYSCKAYR
MHV_MI_nsp1_VIPR_ALG4_293330423_169_909_1_1994_Australia_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTFGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSSKAYA
ML_10_nsp1_VIPR_ALG4_7769352_210_941_1_NA_NA_Unknown_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYA
ML_11_nsp1_VIPR_ALG4_7739594_210_950_1_NA_NA_Unknown_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYA
Parker_ORF1ab_YP_009924368_1_NA_NA_Rat_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGH-RRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYT
Penn_97_1_nsp1_VIPR_ALG4_7769341_210_950_1_NA_NA_Unknown_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYA
RA59_SJHM_nsp1_VIPR_ALG4_225403223_171_911_1_NA_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYA
RA59_R13_nsp1_VIPR_ALG4_225403197_187_927_1_2006_01_01_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYA
RJHM_A_nsp1_VIPR_ALG4_225403216_168_908_1_NA_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRRGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYA
S_nsp1_VIPR_ALG4_298199703_211_951_1_NA_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYA
UNKNOWN_AC_000192_nsp1_VIPR_ALG4_YP_209230_1_215_955_1_NA_NA_Unknown_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYA
SA59_RJHM_nsp1_VIPR_ALG4_225403245_168_908_1_NA_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRRGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYA
inf_MHV_A59_nsp1_VIPR_ALG4_225403278_185_925_1_NA_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYA
repJHM_RA59_nsp1_VIPR_ALG4_225403300_151_891_1_NA_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRRGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYA
repA59_RJHM_nsp1_VIPR_ALG4_225403233_182_922_1_NA_USA_Mouse_Murine_coronavirus AKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYA
*************:******** ** *******:*.*:********:***. :** :**
8190_nsp1_VIPR_ALG4_381354069_183_920_1_NA_NA_Rat_Murine_coronavirus LLKGYRG
681_nsp1_VIPR_ALG4_381354058_183_920_1_NA_NA_Rat_Murine_coronavirus LLKGYRG
A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus LLKGYRG
MHV_1_nsp1_VIPR_ALG4_225403253_191_931_1_NA_USA_Mouse_Murine_coronavirus LLKGYRG
MHV_3_nsp1_VIPR_ALG4_225403263_187_927_1_NA_USA_Mouse_Murine_coronavirus LLRGYRG
MHV_2_nsp1_VIPR_ALG4_6625760_210_950_1_NA_NA_Unknown_Murine_coronavirus LLKGYRG
MHV_A59_ORF1ab_YP_009915688_1_NA_NA_Unknown_Murine_coronavirus LLKGYRG
MHV_BHKR_lab_USA_icA59_17Cl1_2012_nsp1_VIPR_ALG4_530291001_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus LLKGYRG
MHV_BHKR_lab_USA_icA59_L94P_2012_nsp1_VIPR_ALG4_530291013_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus LLKGYRG
MHV_BHKR_lab_USA_icA59_ns2M_2012_nsp1_VIPR_ALG4_530291025_185_925_1_2012_10_25_USA_Mouse_Murine_coronavirus LLKGYRG
MHV_JHM_IA_nsp1_VIPR_ALG4_225403289_190_930_1_NA_USA_Mouse_Murine_coronavirus LLRGYRG
MHV_BHKR_lab_USA_infA59_H126A_2012_nsp1_VIPR_ALG4_530290989_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus LLKGYRG
MHV_S_3239_17_nsp1_VIPR_ALG4_380706996_211_951_1_NA_NA_Unknown_Murine_coronavirus LLKGYRG
MHV_MI_nsp1_VIPR_ALG4_293330423_169_909_1_1994_Australia_Mouse_Murine_coronavirus LLKGYRG
ML_10_nsp1_VIPR_ALG4_7769352_210_941_1_NA_NA_Unknown_Murine_coronavirus LLKGYRG
ML_11_nsp1_VIPR_ALG4_7739594_210_950_1_NA_NA_Unknown_Murine_coronavirus LLKGYRG
Parker_ORF1ab_YP_009924368_1_NA_NA_Rat_Murine_coronavirus LLKGYRG
Penn_97_1_nsp1_VIPR_ALG4_7769341_210_950_1_NA_NA_Unknown_Murine_coronavirus LLKGYRG
RA59_SJHM_nsp1_VIPR_ALG4_225403223_171_911_1_NA_USA_Mouse_Murine_coronavirus LLKGYRG
RA59_R13_nsp1_VIPR_ALG4_225403197_187_927_1_2006_01_01_USA_Mouse_Murine_coronavirus LLKGYRG
RJHM_A_nsp1_VIPR_ALG4_225403216_168_908_1_NA_USA_Mouse_Murine_coronavirus LLRGYRG
S_nsp1_VIPR_ALG4_298199703_211_951_1_NA_USA_Mouse_Murine_coronavirus LLKGYRG
UNKNOWN_AC_000192_nsp1_VIPR_ALG4_YP_209230_1_215_955_1_NA_NA_Unknown_Murine_coronavirus LLRGYRG
SA59_RJHM_nsp1_VIPR_ALG4_225403245_168_908_1_NA_USA_Mouse_Murine_coronavirus LLRGYRG
inf_MHV_A59_nsp1_VIPR_ALG4_225403278_185_925_1_NA_USA_Mouse_Murine_coronavirus LLKGYRG
repJHM_RA59_nsp1_VIPR_ALG4_225403300_151_891_1_NA_USA_Mouse_Murine_coronavirus LLRGYRG
repA59_RJHM_nsp1_VIPR_ALG4_225403233_182_922_1_NA_USA_Mouse_Murine_coronavirus LLKGYRG
**:****
>8190_nsp1_VIPR_ALG4_381354069_183_920_1_NA_NA_Rat_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAGAACTTTGGTTAATCACGTGAGGGTGGATTGTAGCCGGCTTCCAGCTTTGGAGTGCTGTGTTCAGTCTGCCATAATCCGTGATATCTTTGTAGATAAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCTGTCTTGATTATGCCATCCAAGCGCTTGTCTATTCAGGCATGGGCTAATTTGGGTGTGCTGCCTAGAACACCAGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAATACCAGGGGGTGTTCTTGTGACGTCCACGTGGCTTTTCAACTCTTTACCGTTCAACCCGATGGCGTATGGCTAGGTAATGGACGTTTTATAGGCTGGTTTGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAGCCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAGGGGTCTGTGACATCCGGCCAC---CGCCGTGCTGTTACCATGCCTGTGTATGACTTTAATGTGGAGGATGCTTGCGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCTCGCAAGGCGTATACTCTTCTTAAGGGCTATCGCGGT >681_nsp1_VIPR_ALG4_381354058_183_920_1_NA_NA_Rat_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAGAACTTTGGTTAATCACGTGAGGGTGGATTATAGCCGGCTTCCAGCTTTGGAGTGCTGTGTTCAGTCTGCCATAATCCGTGATATCTTTGTAGATGAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCTGTCTTGATTATGCCATCCAAGCGCTTGTCTATTCAGGCATGGGCTAATTTGGGTGTGCTGCCTAGAACACCAGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAATACCAGGGGGTGTTCTTGTGACGTCCACGTGGCTTTTCAACTCTTTACCGTTCAACCCGATGGCGTATGCCTAGGTAATGGACGTTTTATAGGCTGGTTTGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAGCCCTGGTCCATCCTTCTTCGCAAGGGTGGTAACAAGGGGTCTGTGACATCCGGCCAC---CGCCGTGCTGTTACCATGCCTGTGTATCACTTTAATGTGGAGGATGCTTGCGAGGAGGTTCATCTTAACCCGAAGTCAGAGTACTCTCGCAAGGCGTATACTCTTCTTAAGGGCTATCGCGGT >A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGAATTGTAGCCGGCTTCCAGCTTTGGAATGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTAGATGAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGACTAATTTGGGTGTGCTTCCCAAAACAGCTGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAACACCAGGGAGTGCTCTTGTGACGCCCACGTGGCCTTTCACCTTTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCACTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >MHV_1_nsp1_VIPR_ALG4_225403253_191_931_1_NA_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAGGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGAGTGGATTGTAGCCGGCTTCCAGCCTTGGAGTGCTGTGTTCAGTCCGCCATAATCCGTGATATTTTTGTTGACGAGGATCCCCAGAAGGTGGAGGCCTCGACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGGCTAATTTGGGTGTGCTGCCTAAAACAGCTGCCATGGGGTTGTTCAAGCGCCTCTGCCTGTGTAACACCAGGGAGTGCGTTTGTGACGCCCACGTGGCATTTCAACTTTTTACGGTCCAGCCCGATGGTGTATGCCTGGGTAATGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCACTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTCTATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >MHV_3_nsp1_VIPR_ALG4_225403263_187_927_1_NA_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTCCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGCCAAAGGAACCAGCTTAGCTAATCACGTGAGGGTGGATTGTAGCCGGCTTCCAGCTTTGGAGTGTTGTGTTCAGTCCGCCATAATCCGTGATATTTTTGTTGATGAGGATCCCCAAAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGGCCAATTTGGGTGTGCTGCCTAAAACACCTGCCATGGGGCTGTTCAAGCGCTACTGCCTGTGTAACACCAGGGAGTGCTCTTGTGACGCCCACGTGGCATTTCAATTGTTCATGGTCCAACCCGATGGTGTTTGCCTTGGTAATGGACGTTTTATTGGCTGGTTTGTTCCAGCAACAGCTGTACCGGAGTATGCTAAGCAGTGGTTGCAGCCCTGGTCCATTCTTCTTCGTAAGGGTGGTAACAAGGGATCTGTGACATCCGGCCATTTTCGCCGCGCTGTTACCATGCCCCTGTATGACTTTGATGTAGAGGATGCTTGTGAGGAGGTCCATCTTAACCCTAAGGGTAAGTACTCCCGCAGGGCGTATACCCTCCTTAGAGGCTATCGCGGT >MHV_2_nsp1_VIPR_ALG4_6625760_210_950_1_NA_NA_Unknown_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAGCCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCAAAAACTAAAGGAAAAACTTTGATTAATCACGTGAGGGTGGATTGTAGCCGGCTTCCAGCATTGGAGTGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTTGATGAGGATCCCTTGAATGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCTGTCTTGGTCAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGGCTAAGTTGGGTGTGCTGCCTAAAACTCCAGCCATGGGGTTGTTCAAGCGCTTCTGCCTGTGTAACACCAGGGAGTGCGTTTGTGACGCCCACGTGGCTTTTCAACTTTTTACGGTCCAGCCTGATGGTGTATGCCTGGGCAATGGCCGTTTTATAGGCTGGTTTGTGCCAGTCACAGCCATACCGGCGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTAACATCCGGCCATTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTGGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCCGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >MHV_A59_ORF1ab_YP_009915688_1_NA_NA_Unknown_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGAATTGTAGCCGGCTTCCAGCTTTGGAATGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTAGATGAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGACTAATTTGGGTGTGCTTCCCAAAACAGCTGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAACACCAGGGAGTGCTCTTGTGACGCCCACGTGGCCTTTCACCTTTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCACTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >MHV_BHKR_lab_USA_icA59_17Cl1_2012_nsp1_VIPR_ALG4_530291001_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGAATTGTAGCCGGCTTCCAGCTTTGGAATGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTAGATGAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGACTAATTTGGGTGTGCTTCCCAAAACAGCTGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAACACCAGGGAGTGCTCTTGTGACGCCCACGTGGCCTTTCACCTTTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCACTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >MHV_BHKR_lab_USA_icA59_L94P_2012_nsp1_VIPR_ALG4_530291013_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGAATTGTAGCCGGCTTCCAGCTTTGGAATGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTAGATGAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGACTAATTTGGGTGTGCTTCCCAAAACAGCTGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAACACCAGGGAGTGCTCTTGTGACGCCCACGTGGCCTTTCACCTTTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCACTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >MHV_BHKR_lab_USA_icA59_ns2M_2012_nsp1_VIPR_ALG4_530291025_185_925_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGAATTGTAGCCGGCTTCCAGCTTTGGAATGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTAGATGAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGACTAATTTGGGTGTGCTTCCCAAAACAGCTGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAACACCAGGGAGTGCTCTTGTGACGCCCACGTGGCCTTTCACCTTTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCACTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >MHV_JHM_IA_nsp1_VIPR_ALG4_225403289_190_930_1_NA_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGGATTGTAGCCGGCTTCCAGCCTTGGAGTGCTGTGTTCAGTCCGCCATAATCCGTGATATTTTTGTTGACGAGGATCCCCAGAAGGTGGAGGCCTCGACTATGATGGCATTGCAGTTCGGTAGTGCTGTCTTGGTCAAGCCATCCAAGCGCTTGTCTGTTCAGGCATGGGCTAAGTTGGGTGTGCTGCCTAAAACTCCGGCCATGGGGTTGTTCAAGCGCTTCTGCCTGTGTAATACCAGGGAGTGCGTTTGTGACGCCCACGTGGCCTTTCAACTTTTTACGGTCCAGCCCGATGGTGTATGCCTGGGTAACGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCATTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAGGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAGGGGCTATCGCGGT >MHV_BHKR_lab_USA_infA59_H126A_2012_nsp1_VIPR_ALG4_530290989_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGAATTGTAGCCGGCTTCCAGCTTTGGAATGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTAGATGAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGACTAATTTGGGTGTGCTTCCCAAAACAGCTGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAACACCAGGGAGTGCTCTTGTGACGCCCACGTGGCCTTTCACCTTTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCACTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >MHV_S_3239_17_nsp1_VIPR_ALG4_380706996_211_951_1_NA_NA_Unknown_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGGATTGTAGCCGGCTCCCAGCCTTGGAGTGCTGTGTTCAGTCCGCCATAATCCGTGATATTTTTGTTGACGAGGATCCCCAGAAGGTGGAGGCCTCGACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGGCTAAGTTGGGTGTGCTGCCTAAAACAGCAGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAATACCAGGGAGTGCTCTTGTGACGCCCACGTGGCTTTTCAACTCTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGCCTTATAGGCTGGTTTGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCATTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTCCATCTTAACCCGGAAGAGAAGTACTCCTGCAAGGCGTATCGTCTTCTTAAGGGCTATCGCGGT >MHV_MI_nsp1_VIPR_ALG4_293330423_169_909_1_1994_Australia_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCTAAAGCCAAAGGAACCAGTTTAGCTAATCACGTGAGGGTGGATTGTAGCCGGCTTCCAGCTTTGGAGTGCTGTGTTCAGTCCGCCATAATCCGTGATATTTTTGTTGATGAGGATCCCCAAAAGGTGGAGTCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCTGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGGCAAATTTGGGTGTGCTGCCTAAAACACATGCCATGGGGCTGTTCAAGCGCTACTGCCTGTGTAATACCAGGGGTTGCTCTTGTGATGCCCACGTGGCATTTCAATTGTTTATGGTCCAACCTGATGGCGTTTGTCTGGGTAATGGCCGTTTTATTGGTTGGTTTGTTCCAACAACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAATAAGGGATCTGTGACATTCGGCCATTTTCGCCGTGCTGTTACCATGCCTGTGTATGACTTTAACGTGGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCAGCAAGGCGTATGCTCTGCTTAAGGGCTATCGTGGT >ML_10_nsp1_VIPR_ALG4_7769352_210_941_1_NA_NA_Unknown_Murine_coronavirus ---------ATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAGCCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCAAAAACTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGAATTGTAGCCGGCTTCCAGCTTTGGAATGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTAGATGAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGACTAATTTGGGTGTGCTTCCCAAAACAGCTGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAACACCAGGGAGTGCTCTTGTGACGCCCACGTGGCCTTTCACCTTTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCACTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >ML_11_nsp1_VIPR_ALG4_7739594_210_950_1_NA_NA_Unknown_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAGCCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCAAAAACTAAAGGAAAAACTTTGATTAATCACGTGAGGGTGGATTGTAGCCGGCTTCCAGCATTGGAGTGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTTGATGAGGATCCCTTGAATGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCTGTCTTGGTCAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGGCTAAGTTGGGTGTGCTGCCTAAAACTCCAGCCATGGGGTTGTTCAAGCGCTTCTGCCTGTGTAACACCAGGGAGTGCGTTTGTGACGCCCACGTGGCTTTTCAACTTTTTACGGTCCAGCCTGATGGTGTATGCCTGGGCAATGGCCGTTTTATAGGCTGGTTTGTGCCAGTCACAGCCATACCGGCGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTAACATCCGGCCATTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTGGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCCGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >Parker_ORF1ab_YP_009924368_1_NA_NA_Rat_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAGAACTTTGGTTAATCACGTGAGGGTGGATTGTAGCCGGCTTCCAGCTTTGGAGTGCTGTGTTCAGTCTGCCATAATCCGTGATATCTTTGTAGATAAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCTGTCTTGATTATGCCATCCAAGCGCTTGTCTATTCAGGCATGGGCTAATTTGGGTGTGCTGCCTAGAACACCAGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAATACCAGGGGGTGTTCTTGTGACGTCCACGTGGCTTTTCAACTCTTTACCGTTCAACCCGATGGCGTATGCCTAGGTAATGGACGTTTTATAGGCTGGTTTGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAGCCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAGGGGTCTGTGACATCCGGCCAC---CGCCGTGCTGTTACCATGCCTGTGTATGACTTTAATGTGGAGGATGCTTGCGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCTCGCAAGGCGTATACTCTTCTTAAGGGCTATCGCGGT >Penn_97_1_nsp1_VIPR_ALG4_7769341_210_950_1_NA_NA_Unknown_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAGCCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCAAAAACTAAAGGAAAAACTTTGATTAATCACGTGAGGGTGGATTGTAGCCGGCTTCCAGCATTGGAGTGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTTGATGAGGATCCCTTGAATGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCTGTCTTGGTCAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGGCTAAGTTGGGTGTGCTGCCTAAAACTCCAGCCATGGGGTTGTTCAAGCGCTTCTGCCTGTGTAACACCAGGGAGTGCGTTTGTGACGCCCACGTGGCTTTTCAACTTTTTACGGTCCAGCCTGATGGTGTATGCCTGGGCAATGGCCGTTTTATAGGCTGGTTTGTGCCAGTCACAGCCATACCGGCGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGTTCTGTAACATCCGGCCATTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTGGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCCGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >RA59_SJHM_nsp1_VIPR_ALG4_225403223_171_911_1_NA_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGAATTGTAGCCGGCTTCCAGCTTTGGAATGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTAGATGAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGACTAATTTGGGTGTGCTTCCCAAAACAGCTGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAACACCAGGGAGTGCTCTTGTGACGCCCACGTGGCCTTTCACCTTTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCACTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >RA59_R13_nsp1_VIPR_ALG4_225403197_187_927_1_2006_01_01_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGAATTGTAGCCGGCTTCCAGCTTTGGAATGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTAGATGAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGACTAATTTGGGTGTGCTTCCCAAAACAGCTGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAACACCAGGGAGTGCTCTTGTGACGCCCACGTGGCCTTTCACCTTTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCACTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >RJHM_A_nsp1_VIPR_ALG4_225403216_168_908_1_NA_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGGATTGTAGCCGGCTTCCAGCCTTGGAGTGCTGTGTTCAGTCCGCCATAATCCGTGATATTTTTGTTGACGAGGATCCCCAGAAGGTGGAGGCCTCGACTATGATGGCATTGCAGTTCGGTAGTGCTGTCTTGGTCAAGCCATCCAAGCGCTTGTCTGTTCAGGCATGGGCTAAGTTGGGTGTGCTGCCTAAAACTCCGGCCATGGGGTTGTTCAAGCGCTTCTGCCTGTGTAATACCAGGGAGTGCGTTTGTGACGCCCACGTGGCCTTTCAACTTTTTACGGTCCAGCCCGATGGTGTATGCCTGGGTAACGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAGGGGTGGTAACAAAGGGTCTGTGACATCCGGCCATTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAGGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAGGGGCTATCGCGGT >S_nsp1_VIPR_ALG4_298199703_211_951_1_NA_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGGATTGTAGCCGGCTCCCAGCCTTGGAGTGCTGTGTTCAGTCCGCCATAATCCGTGATATTTTTGTTGACGAGGATCCCCAGAAGGTGGAGGCCTCGACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGGCTAAGTTGGGTGTGCTGCCTAAAACAGCAGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAATACCAGGGAGTGCTCTTGTGACGCCCACGTGGCTTTTCAACTCTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGCCTTATAGGCTGGTTTGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCATTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTCCATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >UNKNOWN_AC_000192_nsp1_VIPR_ALG4_YP_209230_1_215_955_1_NA_NA_Unknown_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGGATTGTAGCCGGCTTCCAGCCTTGGAGTGCTGTGTTCAGTCCGCCATAATCCGTGATATTTTTGTTGACGAGGATCCCCAGAAGGTGGAGGCCTCGACTATGATGGCATTGCAGTTCGGTAGTGCTGTCTTGGTCAAGCCATCCAAGCGCTTGTCTGTTCAGGCATGGGCTAAGTTGGGTGTGCTGCCTAAAACTCCGGCCATGGGGTTGTTCAAGCGCTTCTGCCTGTGTAACACCAGGGAGTGCGTTTGTGACGCCCACGTGGCCTTTCAACTTTTTACGGTCCAGCCCGATGGTGTATGCCTGGGTAACGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCATTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAGGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAGGGGCTATCGCGGT >SA59_RJHM_nsp1_VIPR_ALG4_225403245_168_908_1_NA_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGGATTGTAGCCGGCTTCCAGCCTTGGAGTGCTGTGTTCAGTCCGCCATAATCCGTGATATTTTTGTTGACGAGGATCCCCAGAAGGTGGAGGCCTCGACTATGATGGCATTGCAGTTCGGTAGTGCTGTCTTGGTCAAGCCATCCAAGCGCTTGTCTGTTCAGGCATGGGCTAAGTTGGGTGTGCTGCCTAAAACTCCGGCCATGGGGTTGTTCAAGCGCTTCTGCCTGTGTAATACCAGGGAGTGCGTTTGTGACGCCCACGTGGCCTTTCAACTTTTTACGGTCCAGCCCGATGGTGTATGCCTGGGTAACGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAGGGGTGGTAACAAAGGGTCTGTGACATCCGGCCATTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAGGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAGGGGCTATCGCGGT >inf_MHV_A59_nsp1_VIPR_ALG4_225403278_185_925_1_NA_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGAATTGTAGCCGGCTTCCAGCTTTGGAATGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTAGATGAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGACTAATTTGGGTGTGCTTCCCAAAACAGCTGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAACACCAGGGAGTGCTCTTGTGACGCCCACGTGGCCTTTCACCTTTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCACTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT >repJHM_RA59_nsp1_VIPR_ALG4_225403300_151_891_1_NA_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGGATTGTAGCCGGCTTCCAGCCTTGGAGTGCTGTGTTCAGTCCGCCATAATCCGTGATATTTTTGTTGACGAGGATCCCCAGAAGGTGGAGGCCTCGACTATGATGGCATTGCAGTTCGGTAGTGCTGTCTTGGTCAAGCCATCCAAGCGCTTGTCTGTTCAGGCATGGGCTAAGTTGGGTGTGCTGCCTAAAACTCCGGCCATGGGGTTGTTCAAGCGCTTCTGCCTGTGTAATACCAGGGAGTGCGTTTGTGACGCCCACGTGGCCTTTCAACTTTTTACGGTCCAGCCCGATGGTGTATGCCTGGGTAACGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAGGGGTGGTAACAAAGGGTCTGTGACATCCGGCCATTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAGGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAGGGGCTATCGCGGT >repA59_RJHM_nsp1_VIPR_ALG4_225403233_182_922_1_NA_USA_Mouse_Murine_coronavirus ATGGCAAAGATGGGCAAATACGGTCTCGGCTTCAAATGGGCCCCAGAATTTCCATGGATGCTTCCGAACGCATCGGAGAAGTTGGGTAACCCTGAGAGGTCAGAGGAGGATGGGTTTTGCCCCTCTGCTGCGCAAGAACCGAAAGTTAAAGGAAAAACTTTGGTTAATCACGTGAGGGTGAATTGTAGCCGGCTTCCAGCTTTGGAATGCTGTGTTCAGTCTGCCATAATCCGTGATATTTTTGTAGATGAGGATCCCCAGAAGGTGGAGGCCTCAACTATGATGGCATTGCAGTTCGGTAGTGCCGTCTTGGTTAAGCCATCCAAGCGCTTGTCTATTCAGGCATGGACTAATTTGGGTGTGCTTCCCAAAACAGCTGCCATGGGGTTGTTCAAGCGCGTCTGCCTGTGTAACACCAGGGAGTGCTCTTGTGACGCCCACGTGGCCTTTCACCTTTTTACGGTCCAACCCGATGGTGTATGCCTGGGTAATGGCCGTTTTATAGGCTGGTTCGTTCCAGTCACAGCCATACCGGAGTATGCGAAGCAGTGGTTGCAACCCTGGTCCATCCTTCTTCGTAAGGGTGGTAACAAAGGGTCTGTGACATCCGGCCACTTCCGCCGCGCTGTTACCATGCCTGTGTATGACTTTAATGTAGAGGATGCTTGTGAGGAGGTTCATCTTAACCCGAAGGGTAAGTACTCCTGCAAGGCGTATGCTCTTCTTAAGGGCTATCGCGGT
>8190_nsp1_VIPR_ALG4_381354069_183_920_1_NA_NA_Rat_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGRTLVNHVRVDCSRLPALECCVQSAIIRDIFVDKDPQKVEASTMMALQFGSAVLIMPSKRLSIQAWANLGVLPRTPAMGLFKRVCLCNTRGCSCDVHVAFQLFTVQPDGVWLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGH-RRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYTLLKGYRG >681_nsp1_VIPR_ALG4_381354058_183_920_1_NA_NA_Rat_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGRTLVNHVRVDYSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLIMPSKRLSIQAWANLGVLPRTPAMGLFKRVCLCNTRGCSCDVHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGH-RRAVTMPVYHFNVEDACEEVHLNPKSEYSRKAYTLLKGYRG >A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG >MHV_1_nsp1_VIPR_ALG4_225403253_191_931_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWANLGVLPKTAAMGLFKRLCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVYLNPKGKYSCKAYALLKGYRG >MHV_3_nsp1_VIPR_ALG4_225403263_187_927_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKAKGTSLANHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWANLGVLPKTPAMGLFKRYCLCNTRECSCDAHVAFQLFMVQPDGVCLGNGRFIGWFVPATAVPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPLYDFDVEDACEEVHLNPKGKYSRRAYTLLRGYRG >MHV_2_nsp1_VIPR_ALG4_6625760_210_950_1_NA_NA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTKGKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFGSAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRG >MHV_A59_ORF1ab_YP_009915688_1_NA_NA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG >MHV_BHKR_lab_USA_icA59_17Cl1_2012_nsp1_VIPR_ALG4_530291001_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG >MHV_BHKR_lab_USA_icA59_L94P_2012_nsp1_VIPR_ALG4_530291013_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG >MHV_BHKR_lab_USA_icA59_ns2M_2012_nsp1_VIPR_ALG4_530291025_185_925_1_2012_10_25_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG >MHV_JHM_IA_nsp1_VIPR_ALG4_225403289_190_930_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG >MHV_BHKR_lab_USA_infA59_H126A_2012_nsp1_VIPR_ALG4_530290989_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG >MHV_S_3239_17_nsp1_VIPR_ALG4_380706996_211_951_1_NA_NA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWAKLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFQLFTVQPDGVCLGNGRLIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPEEKYSCKAYRLLKGYRG >MHV_MI_nsp1_VIPR_ALG4_293330423_169_909_1_1994_Australia_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKAKGTSLANHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVESSTMMALQFGSAVLVKPSKRLSIQAWANLGVLPKTHAMGLFKRYCLCNTRGCSCDAHVAFQLFMVQPDGVCLGNGRFIGWFVPTTAIPEYAKQWLQPWSILLRKGGNKGSVTFGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSSKAYALLKGYRG >ML_10_nsp1_VIPR_ALG4_7769352_210_941_1_NA_NA_Unknown_Murine_coronavirus ---MGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTKGKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG >ML_11_nsp1_VIPR_ALG4_7739594_210_950_1_NA_NA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTKGKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFGSAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRG >Parker_ORF1ab_YP_009924368_1_NA_NA_Rat_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGRTLVNHVRVDCSRLPALECCVQSAIIRDIFVDKDPQKVEASTMMALQFGSAVLIMPSKRLSIQAWANLGVLPRTPAMGLFKRVCLCNTRGCSCDVHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGH-RRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYTLLKGYRG >Penn_97_1_nsp1_VIPR_ALG4_7769341_210_950_1_NA_NA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTKGKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFGSAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRG >RA59_SJHM_nsp1_VIPR_ALG4_225403223_171_911_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG >RA59_R13_nsp1_VIPR_ALG4_225403197_187_927_1_2006_01_01_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG >RJHM_A_nsp1_VIPR_ALG4_225403216_168_908_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRRGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG >S_nsp1_VIPR_ALG4_298199703_211_951_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWAKLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFQLFTVQPDGVCLGNGRLIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG >UNKNOWN_AC_000192_nsp1_VIPR_ALG4_YP_209230_1_215_955_1_NA_NA_Unknown_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG >SA59_RJHM_nsp1_VIPR_ALG4_225403245_168_908_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRRGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG >inf_MHV_A59_nsp1_VIPR_ALG4_225403278_185_925_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG >repJHM_RA59_nsp1_VIPR_ALG4_225403300_151_891_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAFQLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRRGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRG >repA59_RJHM_nsp1_VIPR_ALG4_225403233_182_922_1_NA_USA_Mouse_Murine_coronavirus MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVKGKTLVNHVRVNCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFGSAVLVKPSKRLSIQAWTNLGVLPKTAAMGLFKRVCLCNTRECSCDAHVAFHLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGSVTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSCKAYALLKGYRG
Reading sequence file /data//pss_subsets/A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus.result/original_alignment/codeml/fasta/A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus.result.1
Found 27 sequences of length 741
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 4.0%
Found 86 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 9
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 84 polymorphic sites
**p-Value(s)**
----------
NSS: 5.00e-03 (1000 permutations)
Max Chi^2: 9.00e-03 (1000 permutations)
PHI (Permutation): 3.00e-03 (1000 permutations)
PHI (Normal): 2.39e-03
#NEXUS
[ID: 8354679287]
begin taxa;
dimensions ntax=27;
taxlabels
8190_nsp1_VIPR_ALG4_381354069_183_920_1_NA_NA_Rat_Murine_coronavirus
MHV_BHKR_lab_USA_icA59_ns2M_2012_nsp1_VIPR_ALG4_530291025_185_925_1_2012_10_25_USA_Mouse_Murine_coronavirus
MHV_JHM_IA_nsp1_VIPR_ALG4_225403289_190_930_1_NA_USA_Mouse_Murine_coronavirus
MHV_BHKR_lab_USA_infA59_H126A_2012_nsp1_VIPR_ALG4_530290989_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus
MHV_S_3239_17_nsp1_VIPR_ALG4_380706996_211_951_1_NA_NA_Unknown_Murine_coronavirus
MHV_MI_nsp1_VIPR_ALG4_293330423_169_909_1_1994_Australia_Mouse_Murine_coronavirus
ML_10_nsp1_VIPR_ALG4_7769352_210_941_1_NA_NA_Unknown_Murine_coronavirus
ML_11_nsp1_VIPR_ALG4_7739594_210_950_1_NA_NA_Unknown_Murine_coronavirus
Parker_ORF1ab_YP_009924368_1_NA_NA_Rat_Murine_coronavirus
Penn_97_1_nsp1_VIPR_ALG4_7769341_210_950_1_NA_NA_Unknown_Murine_coronavirus
RA59_SJHM_nsp1_VIPR_ALG4_225403223_171_911_1_NA_USA_Mouse_Murine_coronavirus
681_nsp1_VIPR_ALG4_381354058_183_920_1_NA_NA_Rat_Murine_coronavirus
RA59_R13_nsp1_VIPR_ALG4_225403197_187_927_1_2006_01_01_USA_Mouse_Murine_coronavirus
RJHM_A_nsp1_VIPR_ALG4_225403216_168_908_1_NA_USA_Mouse_Murine_coronavirus
S_nsp1_VIPR_ALG4_298199703_211_951_1_NA_USA_Mouse_Murine_coronavirus
UNKNOWN_AC_000192_nsp1_VIPR_ALG4_YP_209230_1_215_955_1_NA_NA_Unknown_Murine_coronavirus
SA59_RJHM_nsp1_VIPR_ALG4_225403245_168_908_1_NA_USA_Mouse_Murine_coronavirus
inf_MHV_A59_nsp1_VIPR_ALG4_225403278_185_925_1_NA_USA_Mouse_Murine_coronavirus
repJHM_RA59_nsp1_VIPR_ALG4_225403300_151_891_1_NA_USA_Mouse_Murine_coronavirus
repA59_RJHM_nsp1_VIPR_ALG4_225403233_182_922_1_NA_USA_Mouse_Murine_coronavirus
A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus
MHV_1_nsp1_VIPR_ALG4_225403253_191_931_1_NA_USA_Mouse_Murine_coronavirus
MHV_3_nsp1_VIPR_ALG4_225403263_187_927_1_NA_USA_Mouse_Murine_coronavirus
MHV_2_nsp1_VIPR_ALG4_6625760_210_950_1_NA_NA_Unknown_Murine_coronavirus
MHV_A59_ORF1ab_YP_009915688_1_NA_NA_Unknown_Murine_coronavirus
MHV_BHKR_lab_USA_icA59_17Cl1_2012_nsp1_VIPR_ALG4_530291001_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus
MHV_BHKR_lab_USA_icA59_L94P_2012_nsp1_VIPR_ALG4_530291013_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus
;
end;
begin trees;
translate
1 8190_nsp1_VIPR_ALG4_381354069_183_920_1_NA_NA_Rat_Murine_coronavirus,
2 MHV_BHKR_lab_USA_icA59_ns2M_2012_nsp1_VIPR_ALG4_530291025_185_925_1_2012_10_25_USA_Mouse_Murine_coronavirus,
3 MHV_JHM_IA_nsp1_VIPR_ALG4_225403289_190_930_1_NA_USA_Mouse_Murine_coronavirus,
4 MHV_BHKR_lab_USA_infA59_H126A_2012_nsp1_VIPR_ALG4_530290989_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus,
5 MHV_S_3239_17_nsp1_VIPR_ALG4_380706996_211_951_1_NA_NA_Unknown_Murine_coronavirus,
6 MHV_MI_nsp1_VIPR_ALG4_293330423_169_909_1_1994_Australia_Mouse_Murine_coronavirus,
7 ML_10_nsp1_VIPR_ALG4_7769352_210_941_1_NA_NA_Unknown_Murine_coronavirus,
8 ML_11_nsp1_VIPR_ALG4_7739594_210_950_1_NA_NA_Unknown_Murine_coronavirus,
9 Parker_ORF1ab_YP_009924368_1_NA_NA_Rat_Murine_coronavirus,
10 Penn_97_1_nsp1_VIPR_ALG4_7769341_210_950_1_NA_NA_Unknown_Murine_coronavirus,
11 RA59_SJHM_nsp1_VIPR_ALG4_225403223_171_911_1_NA_USA_Mouse_Murine_coronavirus,
12 681_nsp1_VIPR_ALG4_381354058_183_920_1_NA_NA_Rat_Murine_coronavirus,
13 RA59_R13_nsp1_VIPR_ALG4_225403197_187_927_1_2006_01_01_USA_Mouse_Murine_coronavirus,
14 RJHM_A_nsp1_VIPR_ALG4_225403216_168_908_1_NA_USA_Mouse_Murine_coronavirus,
15 S_nsp1_VIPR_ALG4_298199703_211_951_1_NA_USA_Mouse_Murine_coronavirus,
16 UNKNOWN_AC_000192_nsp1_VIPR_ALG4_YP_209230_1_215_955_1_NA_NA_Unknown_Murine_coronavirus,
17 SA59_RJHM_nsp1_VIPR_ALG4_225403245_168_908_1_NA_USA_Mouse_Murine_coronavirus,
18 inf_MHV_A59_nsp1_VIPR_ALG4_225403278_185_925_1_NA_USA_Mouse_Murine_coronavirus,
19 repJHM_RA59_nsp1_VIPR_ALG4_225403300_151_891_1_NA_USA_Mouse_Murine_coronavirus,
20 repA59_RJHM_nsp1_VIPR_ALG4_225403233_182_922_1_NA_USA_Mouse_Murine_coronavirus,
21 A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus,
22 MHV_1_nsp1_VIPR_ALG4_225403253_191_931_1_NA_USA_Mouse_Murine_coronavirus,
23 MHV_3_nsp1_VIPR_ALG4_225403263_187_927_1_NA_USA_Mouse_Murine_coronavirus,
24 MHV_2_nsp1_VIPR_ALG4_6625760_210_950_1_NA_NA_Unknown_Murine_coronavirus,
25 MHV_A59_ORF1ab_YP_009915688_1_NA_NA_Unknown_Murine_coronavirus,
26 MHV_BHKR_lab_USA_icA59_17Cl1_2012_nsp1_VIPR_ALG4_530291001_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus,
27 MHV_BHKR_lab_USA_icA59_L94P_2012_nsp1_VIPR_ALG4_530291013_189_929_1_2012_10_25_USA_Mouse_Murine_coronavirus
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:2.218993e-03,9:9.028593e-04,(((2:8.915184e-04,4:9.185409e-04,7:6.294715e-03,11:8.956523e-04,13:8.661786e-04,18:8.917529e-04,20:9.347125e-04,21:9.171116e-04,25:9.075966e-04,26:8.963134e-04,27:8.982484e-04)1.000:1.276540e-02,((((((3:9.255724e-04,(14:8.781836e-04,17:9.264894e-04,19:8.606530e-04)0.974:2.196160e-03)0.878:2.116283e-03,16:1.013788e-03)0.995:7.884329e-03,(8:9.085326e-04,10:2.197255e-03,24:8.954058e-04)1.000:3.084664e-02)1.000:1.036037e-02,22:1.005560e-02)0.924:7.266731e-03,(5:8.950523e-03,15:8.928388e-04)1.000:1.102038e-02)0.889:6.463902e-03,(6:3.292639e-02,23:3.555226e-02)1.000:4.179284e-02)0.599:5.406511e-03)1.000:3.885500e-02,12:1.130321e-02)0.562:1.787374e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:2.218993e-03,9:9.028593e-04,(((2:8.915184e-04,4:9.185409e-04,7:6.294715e-03,11:8.956523e-04,13:8.661786e-04,18:8.917529e-04,20:9.347125e-04,21:9.171116e-04,25:9.075966e-04,26:8.963134e-04,27:8.982484e-04):1.276540e-02,((((((3:9.255724e-04,(14:8.781836e-04,17:9.264894e-04,19:8.606530e-04):2.196160e-03):2.116283e-03,16:1.013788e-03):7.884329e-03,(8:9.085326e-04,10:2.197255e-03,24:8.954058e-04):3.084664e-02):1.036037e-02,22:1.005560e-02):7.266731e-03,(5:8.950523e-03,15:8.928388e-04):1.102038e-02):6.463902e-03,(6:3.292639e-02,23:3.555226e-02):4.179284e-02):5.406511e-03):3.885500e-02,12:1.130321e-02):1.787374e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2049.49 -2086.80
2 -2048.52 -2080.56
--------------------------------------
TOTAL -2048.89 -2086.11
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.340899 0.001680 0.263418 0.419926 0.338056 1213.54 1264.09 1.000
r(A<->C){all} 0.070377 0.000570 0.031788 0.120544 0.068119 815.12 817.16 1.000
r(A<->G){all} 0.244296 0.001515 0.167895 0.319547 0.242887 530.56 661.30 1.000
r(A<->T){all} 0.069568 0.000500 0.028521 0.113691 0.067146 766.32 881.72 1.001
r(C<->G){all} 0.057384 0.000358 0.022706 0.093881 0.055287 878.15 884.54 1.000
r(C<->T){all} 0.484219 0.002443 0.384626 0.576746 0.484624 533.35 650.59 1.000
r(G<->T){all} 0.074156 0.000376 0.038580 0.111961 0.072689 677.78 795.35 1.000
pi(A){all} 0.215603 0.000208 0.187779 0.242889 0.215499 1049.36 1113.12 1.000
pi(C){all} 0.226057 0.000217 0.198875 0.254557 0.225921 1004.69 1109.10 1.000
pi(G){all} 0.285688 0.000253 0.254679 0.316512 0.285397 1280.42 1326.84 1.000
pi(T){all} 0.272652 0.000250 0.241171 0.301913 0.272431 1040.22 1053.98 1.000
alpha{1,2} 0.291003 0.023639 0.005594 0.558584 0.261674 962.93 963.84 1.000
alpha{3} 1.859873 1.130159 0.335977 3.985038 1.615574 1092.39 1180.60 1.000
pinvar{all} 0.468112 0.012011 0.254044 0.675947 0.486371 630.22 639.97 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/A59_ORF1ab_YP_009924342_1_NA_USA_Unknown_Murine_coronavirus.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 27 ls = 243
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 8 8 7 7 7 8 | Ser TCT 6 6 5 3 4 4 | Tyr TAT 4 5 4 5 4 4 | Cys TGT 5 4 5 5 6 5
TTC 3 3 4 4 4 4 | TCC 3 3 4 5 5 4 | TAC 2 2 2 2 3 2 | TGC 4 5 6 6 4 5
Leu TTA 0 0 0 0 1 0 | TCA 2 3 2 1 2 2 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 9 9 9 9 8 10 | TCG 1 1 1 2 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 7 6 6 6 6 6
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 7 7 9 8 6 8 | Pro CCT 3 3 2 3 4 4 | His CAT 1 1 1 0 2 2 | Arg CGT 4 3 3 3 3 3
CTC 2 2 1 2 3 1 | CCC 4 4 5 4 5 3 | CAC 3 4 4 3 2 2 | CGC 5 6 5 5 6 6
CTA 1 1 0 0 0 0 | CCA 6 6 5 5 5 7 | Gln CAA 3 3 3 2 4 3 | CGA 0 0 0 0 0 0
CTG 2 2 2 3 4 3 | CCG 4 4 4 4 3 3 | CAG 6 6 5 7 5 5 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 2 2 4 3 | Thr ACT 3 3 3 2 1 4 | Asn AAT 5 5 5 4 3 4 | Ser AGT 1 1 1 1 1 1
ATC 3 3 2 2 1 2 | ACC 3 3 2 2 4 2 | AAC 4 4 5 5 5 4 | AGC 1 1 1 1 2 2
ATA 3 3 3 3 1 3 | ACA 3 3 3 3 3 2 | Lys AAA 4 4 7 7 5 7 | Arg AGA 2 2 0 1 1 0
Met ATG 7 7 6 6 7 6 | ACG 0 0 1 1 0 1 | AAG 12 10 11 11 10 11 | AGG 3 3 3 2 4 3
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 7 7 7 8 6 5 | Ala GCT 7 7 6 6 7 7 | Asp GAT 7 7 6 6 8 7 | Gly GGT 9 8 10 10 10 9
GTC 4 4 4 4 3 4 | GCC 5 5 8 8 8 6 | GAC 2 1 2 3 2 2 | GGC 6 6 6 6 5 7
GTA 2 2 3 2 2 2 | GCA 3 3 3 4 5 4 | Glu GAA 2 2 3 2 2 2 | GGA 2 2 1 1 3 1
GTG 8 8 7 7 6 8 | GCG 3 3 3 3 2 4 | GAG 10 12 11 12 12 11 | GGG 4 4 3 3 2 3
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 7 7 7 7 7 7 | Ser TCT 5 5 5 5 3 5 | Tyr TAT 4 4 4 4 4 4 | Cys TGT 5 5 5 5 5 5
TTC 4 4 4 4 5 4 | TCC 4 4 4 4 5 4 | TAC 2 2 2 2 2 2 | TGC 6 6 6 6 6 6
Leu TTA 0 0 0 0 0 0 | TCA 2 2 2 2 1 2 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 9 9 9 9 9 9 | TCG 1 1 1 1 2 1 | TAG 0 0 0 0 0 0 | Trp TGG 6 6 6 6 6 6
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 9 9 9 9 8 9 | Pro CCT 2 2 2 2 3 2 | His CAT 1 1 1 1 2 1 | Arg CGT 3 3 3 3 3 3
CTC 1 1 1 1 1 1 | CCC 5 5 5 5 4 5 | CAC 4 4 4 4 2 4 | CGC 5 5 5 5 5 5
CTA 0 0 0 0 0 0 | CCA 5 5 5 5 5 5 | Gln CAA 3 3 3 3 3 3 | CGA 0 0 0 0 0 0
CTG 2 2 2 2 3 2 | CCG 4 4 4 4 5 4 | CAG 5 5 5 5 6 5 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 2 2 1 2 | Thr ACT 3 3 3 3 3 3 | Asn AAT 5 5 5 5 3 5 | Ser AGT 1 1 1 1 1 1
ATC 2 2 2 2 2 2 | ACC 2 2 2 2 2 2 | AAC 5 5 5 5 5 5 | AGC 1 1 1 1 1 1
ATA 3 3 3 3 3 3 | ACA 3 3 3 3 2 3 | Lys AAA 7 7 7 7 7 7 | Arg AGA 0 0 0 0 0 0
Met ATG 6 6 6 6 6 6 | ACG 1 1 1 1 1 1 | AAG 11 11 11 11 10 11 | AGG 3 3 3 3 5 3
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 7 7 7 7 9 7 | Ala GCT 6 6 6 6 6 6 | Asp GAT 6 6 6 6 6 6 | Gly GGT 10 10 10 10 10 10
GTC 4 4 4 4 4 4 | GCC 8 8 8 8 8 8 | GAC 2 2 2 2 3 2 | GGC 6 6 6 6 6 6
GTA 3 3 3 3 2 3 | GCA 3 3 3 3 3 3 | Glu GAA 3 3 3 3 2 3 | GGA 1 1 1 1 1 1
GTG 7 7 7 7 7 7 | GCG 3 3 3 3 3 3 | GAG 11 11 11 11 12 11 | GGG 3 3 3 3 3 3
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 7 8 7 8 8 8 | Ser TCT 4 4 5 4 6 4 | Tyr TAT 4 4 4 4 4 4 | Cys TGT 5 6 5 5 5 5
TTC 3 4 4 4 3 4 | TCC 5 5 4 4 3 4 | TAC 2 3 2 2 2 2 | TGC 6 4 6 5 5 5
Leu TTA 0 1 0 0 0 0 | TCA 1 2 2 2 2 2 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 9 8 9 10 9 10 | TCG 2 1 1 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 6 6 6 6 6 6
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 7 6 9 8 7 8 | Pro CCT 3 5 2 4 3 4 | His CAT 2 3 1 2 1 2 | Arg CGT 3 5 3 3 4 3
CTC 3 1 1 1 2 1 | CCC 4 3 5 3 4 3 | CAC 2 2 4 2 3 2 | CGC 6 3 5 6 5 6
CTA 0 0 0 0 1 0 | CCA 5 5 6 7 6 7 | Gln CAA 4 5 3 3 3 3 | CGA 0 0 0 0 0 0
CTG 3 5 2 3 2 3 | CCG 4 3 3 3 4 3 | CAG 5 4 5 5 6 5 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 3 2 3 2 3 | Thr ACT 2 1 4 4 3 4 | Asn AAT 4 5 5 4 5 4 | Ser AGT 1 2 1 1 1 1
ATC 2 2 2 2 3 2 | ACC 2 3 2 2 3 2 | AAC 4 4 4 4 4 4 | AGC 1 2 2 2 1 2
ATA 3 2 3 3 3 3 | ACA 3 4 3 2 3 2 | Lys AAA 7 5 7 7 4 7 | Arg AGA 0 0 0 0 2 0
Met ATG 6 7 6 6 7 6 | ACG 1 0 1 1 0 1 | AAG 11 12 11 11 12 11 | AGG 3 3 3 3 3 3
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 7 7 6 5 7 5 | Ala GCT 5 7 6 7 7 7 | Asp GAT 6 8 6 7 7 7 | Gly GGT 9 11 10 9 9 10
GTC 5 2 4 4 4 4 | GCC 8 6 8 6 5 6 | GAC 3 1 2 2 2 2 | GGC 6 6 6 7 6 7
GTA 2 0 3 2 2 2 | GCA 4 5 3 4 3 4 | Glu GAA 3 2 3 2 2 2 | GGA 1 2 1 1 2 1
GTG 7 8 7 8 8 8 | GCG 3 3 3 4 3 4 | GAG 13 11 11 11 10 11 | GGG 3 2 3 3 4 2
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 7 7 7 7 7 7 | Ser TCT 5 5 3 4 3 3 | Tyr TAT 4 4 4 4 4 4 | Cys TGT 5 5 5 5 5 5
TTC 4 4 5 3 5 5 | TCC 4 4 5 5 5 5 | TAC 2 2 2 2 2 2 | TGC 6 6 6 6 6 6
Leu TTA 0 0 0 0 0 0 | TCA 2 2 1 1 1 1 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 9 9 9 9 9 9 | TCG 1 1 2 2 2 2 | TAG 0 0 0 0 0 0 | Trp TGG 6 6 6 6 6 6
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 9 9 8 7 8 8 | Pro CCT 2 2 3 3 3 3 | His CAT 1 1 2 2 2 2 | Arg CGT 3 3 3 2 3 3
CTC 1 1 1 3 1 1 | CCC 5 5 4 4 4 4 | CAC 4 4 2 2 2 2 | CGC 5 5 5 6 5 5
CTA 0 0 0 0 0 0 | CCA 5 5 5 5 5 5 | Gln CAA 3 3 3 4 3 3 | CGA 0 0 0 0 0 0
CTG 2 2 3 3 3 3 | CCG 4 4 5 4 5 5 | CAG 5 5 6 5 6 6 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 1 2 1 1 | Thr ACT 3 3 3 2 3 3 | Asn AAT 5 5 3 4 2 3 | Ser AGT 1 1 1 1 1 1
ATC 2 2 2 2 2 2 | ACC 2 2 2 2 2 2 | AAC 5 5 5 4 6 5 | AGC 1 1 1 1 1 1
ATA 3 3 3 3 3 3 | ACA 3 3 2 3 2 2 | Lys AAA 7 7 7 7 7 7 | Arg AGA 0 0 0 0 0 0
Met ATG 6 6 6 6 6 6 | ACG 1 1 1 1 1 1 | AAG 11 11 9 12 10 9 | AGG 3 3 6 3 5 6
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 7 7 9 7 9 9 | Ala GCT 6 6 6 6 6 6 | Asp GAT 6 6 6 6 6 6 | Gly GGT 10 10 10 10 10 10
GTC 4 4 4 5 4 4 | GCC 8 8 8 8 8 8 | GAC 2 2 3 3 3 3 | GGC 6 6 6 6 6 6
GTA 3 3 2 2 2 2 | GCA 3 3 3 4 3 3 | Glu GAA 3 3 2 2 2 2 | GGA 1 1 1 1 1 1
GTG 7 7 7 7 7 7 | GCG 3 3 3 3 3 3 | GAG 11 11 12 12 12 12 | GGG 3 3 3 3 3 3
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------
Phe TTT 7 7 7 | Ser TCT 5 3 5 | Tyr TAT 4 4 4 | Cys TGT 5 5 5
TTC 4 5 4 | TCC 4 5 4 | TAC 2 2 2 | TGC 6 6 6
Leu TTA 0 0 0 | TCA 2 1 2 | *** TAA 0 0 0 | *** TGA 0 0 0
TTG 9 9 9 | TCG 1 2 1 | TAG 0 0 0 | Trp TGG 6 6 6
--------------------------------------------------------------------------------------
Leu CTT 9 8 9 | Pro CCT 2 3 2 | His CAT 1 2 1 | Arg CGT 3 3 3
CTC 1 1 1 | CCC 5 4 5 | CAC 4 2 4 | CGC 5 5 5
CTA 0 0 0 | CCA 5 5 5 | Gln CAA 3 3 3 | CGA 0 0 0
CTG 2 3 2 | CCG 4 5 4 | CAG 5 6 5 | CGG 1 1 1
--------------------------------------------------------------------------------------
Ile ATT 2 1 2 | Thr ACT 3 3 3 | Asn AAT 5 3 5 | Ser AGT 1 1 1
ATC 2 2 2 | ACC 2 2 2 | AAC 5 5 5 | AGC 1 1 1
ATA 3 3 3 | ACA 3 2 3 | Lys AAA 7 7 7 | Arg AGA 0 0 0
Met ATG 6 6 6 | ACG 1 1 1 | AAG 11 9 11 | AGG 3 6 3
--------------------------------------------------------------------------------------
Val GTT 7 9 7 | Ala GCT 6 6 6 | Asp GAT 6 6 6 | Gly GGT 10 10 10
GTC 4 4 4 | GCC 8 8 8 | GAC 2 3 2 | GGC 6 6 6
GTA 3 2 3 | GCA 3 3 3 | Glu GAA 3 2 3 | GGA 1 1 1
GTG 7 7 7 | GCG 3 3 3 | GAG 11 12 11 | GGG 3 3 3
--------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C1
position 1: T:0.22222 C:0.21399 A:0.23045 G:0.33333
position 2: T:0.27984 C:0.23045 A:0.26749 G:0.22222
position 3: T:0.32510 C:0.22222 A:0.13580 G:0.31687
Average T:0.27572 C:0.22222 A:0.21125 G:0.29081
#2: C2
position 1: T:0.22634 C:0.21811 A:0.22222 G:0.33333
position 2: T:0.27984 C:0.23457 A:0.27160 G:0.21399
position 3: T:0.31687 C:0.23045 A:0.13992 G:0.31276
Average T:0.27435 C:0.22771 A:0.21125 G:0.28669
#3: C3
position 1: T:0.22634 C:0.20576 A:0.22634 G:0.34156
position 2: T:0.27160 C:0.23457 A:0.28395 G:0.20988
position 3: T:0.31276 C:0.25103 A:0.13580 G:0.30041
Average T:0.27023 C:0.23045 A:0.21536 G:0.28395
#4: C4
position 1: T:0.22634 C:0.20576 A:0.21811 G:0.34979
position 2: T:0.27572 C:0.23045 A:0.28395 G:0.20988
position 3: T:0.30041 C:0.25514 A:0.12757 G:0.31687
Average T:0.26749 C:0.23045 A:0.20988 G:0.29218
#5: C5
position 1: T:0.22634 C:0.21811 A:0.21399 G:0.34156
position 2: T:0.25926 C:0.24280 A:0.27572 G:0.22222
position 3: T:0.31276 C:0.25514 A:0.13992 G:0.29218
Average T:0.26612 C:0.23868 A:0.20988 G:0.28532
#6: C6
position 1: T:0.22634 C:0.20988 A:0.22634 G:0.33745
position 2: T:0.27572 C:0.23868 A:0.27160 G:0.21399
position 3: T:0.32099 C:0.23045 A:0.13580 G:0.31276
Average T:0.27435 C:0.22634 A:0.21125 G:0.28807
#7: C7
position 1: T:0.22634 C:0.20576 A:0.22634 G:0.34156
position 2: T:0.27160 C:0.23457 A:0.28395 G:0.20988
position 3: T:0.31276 C:0.25103 A:0.13580 G:0.30041
Average T:0.27023 C:0.23045 A:0.21536 G:0.28395
#8: C8
position 1: T:0.22634 C:0.20576 A:0.22634 G:0.34156
position 2: T:0.27160 C:0.23457 A:0.28395 G:0.20988
position 3: T:0.31276 C:0.25103 A:0.13580 G:0.30041
Average T:0.27023 C:0.23045 A:0.21536 G:0.28395
#9: C9
position 1: T:0.22634 C:0.20576 A:0.22634 G:0.34156
position 2: T:0.27160 C:0.23457 A:0.28395 G:0.20988
position 3: T:0.31276 C:0.25103 A:0.13580 G:0.30041
Average T:0.27023 C:0.23045 A:0.21536 G:0.28395
#10: C10
position 1: T:0.22634 C:0.20576 A:0.22634 G:0.34156
position 2: T:0.27160 C:0.23457 A:0.28395 G:0.20988
position 3: T:0.31276 C:0.25103 A:0.13580 G:0.30041
Average T:0.27023 C:0.23045 A:0.21536 G:0.28395
#11: C11
position 1: T:0.22634 C:0.20988 A:0.21399 G:0.34979
position 2: T:0.27572 C:0.23045 A:0.27572 G:0.21811
position 3: T:0.30453 C:0.25103 A:0.11934 G:0.32510
Average T:0.26886 C:0.23045 A:0.20302 G:0.29767
#12: C12
position 1: T:0.22634 C:0.20576 A:0.22634 G:0.34156
position 2: T:0.27160 C:0.23457 A:0.28395 G:0.20988
position 3: T:0.31276 C:0.25103 A:0.13580 G:0.30041
Average T:0.27023 C:0.23045 A:0.21536 G:0.28395
#13: C13
position 1: T:0.22222 C:0.21399 A:0.21399 G:0.34979
position 2: T:0.27160 C:0.23045 A:0.28807 G:0.20988
position 3: T:0.29218 C:0.25514 A:0.13580 G:0.31687
Average T:0.26200 C:0.23320 A:0.21262 G:0.29218
#14: C14
position 1: T:0.23045 C:0.20988 A:0.22634 G:0.33333
position 2: T:0.26337 C:0.23457 A:0.28395 G:0.21811
position 3: T:0.34979 C:0.20988 A:0.13580 G:0.30453
Average T:0.28121 C:0.21811 A:0.21536 G:0.28532
#15: C15
position 1: T:0.22634 C:0.20576 A:0.23045 G:0.33745
position 2: T:0.26749 C:0.23868 A:0.27984 G:0.21399
position 3: T:0.31276 C:0.25103 A:0.13992 G:0.29630
Average T:0.26886 C:0.23182 A:0.21674 G:0.28258
#16: C16
position 1: T:0.22634 C:0.20988 A:0.22634 G:0.33745
position 2: T:0.27572 C:0.23868 A:0.27160 G:0.21399
position 3: T:0.32099 C:0.23045 A:0.13580 G:0.31276
Average T:0.27435 C:0.22634 A:0.21125 G:0.28807
#17: C17
position 1: T:0.22222 C:0.21399 A:0.23045 G:0.33333
position 2: T:0.27984 C:0.23045 A:0.26749 G:0.22222
position 3: T:0.32510 C:0.22634 A:0.13580 G:0.31276
Average T:0.27572 C:0.22359 A:0.21125 G:0.28944
#18: C18
position 1: T:0.22634 C:0.20988 A:0.22634 G:0.33745
position 2: T:0.27572 C:0.23868 A:0.27160 G:0.21399
position 3: T:0.32510 C:0.23045 A:0.13580 G:0.30864
Average T:0.27572 C:0.22634 A:0.21125 G:0.28669
#19: C19
position 1: T:0.22634 C:0.20576 A:0.22634 G:0.34156
position 2: T:0.27160 C:0.23457 A:0.28395 G:0.20988
position 3: T:0.31276 C:0.25103 A:0.13580 G:0.30041
Average T:0.27023 C:0.23045 A:0.21536 G:0.28395
#20: C20
position 1: T:0.22634 C:0.20576 A:0.22634 G:0.34156
position 2: T:0.27160 C:0.23457 A:0.28395 G:0.20988
position 3: T:0.31276 C:0.25103 A:0.13580 G:0.30041
Average T:0.27023 C:0.23045 A:0.21536 G:0.28395
#21: C21
position 1: T:0.22634 C:0.20988 A:0.21399 G:0.34979
position 2: T:0.27572 C:0.23045 A:0.27160 G:0.22222
position 3: T:0.30453 C:0.25103 A:0.11934 G:0.32510
Average T:0.26886 C:0.23045 A:0.20165 G:0.29904
#22: C22
position 1: T:0.22222 C:0.20988 A:0.21811 G:0.34979
position 2: T:0.27160 C:0.23457 A:0.28395 G:0.20988
position 3: T:0.29630 C:0.25514 A:0.13169 G:0.31687
Average T:0.26337 C:0.23320 A:0.21125 G:0.29218
#23: C23
position 1: T:0.22634 C:0.20988 A:0.21399 G:0.34979
position 2: T:0.27572 C:0.23045 A:0.27572 G:0.21811
position 3: T:0.30041 C:0.25514 A:0.11934 G:0.32510
Average T:0.26749 C:0.23182 A:0.20302 G:0.29767
#24: C24
position 1: T:0.22634 C:0.20988 A:0.21399 G:0.34979
position 2: T:0.27572 C:0.23045 A:0.27160 G:0.22222
position 3: T:0.30453 C:0.25103 A:0.11934 G:0.32510
Average T:0.26886 C:0.23045 A:0.20165 G:0.29904
#25: C25
position 1: T:0.22634 C:0.20576 A:0.22634 G:0.34156
position 2: T:0.27160 C:0.23457 A:0.28395 G:0.20988
position 3: T:0.31276 C:0.25103 A:0.13580 G:0.30041
Average T:0.27023 C:0.23045 A:0.21536 G:0.28395
#26: C26
position 1: T:0.22634 C:0.20988 A:0.21399 G:0.34979
position 2: T:0.27572 C:0.23045 A:0.27160 G:0.22222
position 3: T:0.30453 C:0.25103 A:0.11934 G:0.32510
Average T:0.26886 C:0.23045 A:0.20165 G:0.29904
#27: C27
position 1: T:0.22634 C:0.20576 A:0.22634 G:0.34156
position 2: T:0.27160 C:0.23457 A:0.28395 G:0.20988
position 3: T:0.31276 C:0.25103 A:0.13580 G:0.30041
Average T:0.27023 C:0.23045 A:0.21536 G:0.28395
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 196 | Ser S TCT 119 | Tyr Y TAT 110 | Cys C TGT 136
TTC 108 | TCC 115 | TAC 56 | TGC 151
Leu L TTA 2 | TCA 47 | *** * TAA 0 | *** * TGA 0
TTG 244 | TCG 35 | TAG 0 | Trp W TGG 163
------------------------------------------------------------------------------
Leu L CTT 218 | Pro P CCT 76 | His H CAT 39 | Arg R CGT 84
CTC 37 | CCC 116 | CAC 81 | CGC 140
CTA 3 | CCA 145 | Gln Q CAA 85 | CGA 0
CTG 70 | CCG 107 | CAG 144 | CGG 27
------------------------------------------------------------------------------
Ile I ATT 55 | Thr T ACT 78 | Asn N AAT 116 | Ser S AGT 28
ATC 56 | ACC 60 | AAC 126 | AGC 33
ATA 78 | ACA 74 | Lys K AAA 176 | Arg R AGA 8
Met M ATG 167 | ACG 22 | AAG 291 | AGG 94
------------------------------------------------------------------------------
Val V GTT 192 | Ala A GCT 169 | Asp D GAT 172 | Gly G GGT 264
GTC 107 | GCC 199 | GAC 60 | GGC 164
GTA 63 | GCA 91 | Glu E GAA 66 | GGA 33
GTG 195 | GCG 83 | GAG 306 | GGG 81
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.22588 C:0.20911 A:0.22283 G:0.34217
position 2: T:0.27298 C:0.23411 A:0.27862 G:0.21430
position 3: T:0.31276 C:0.24524 A:0.13275 G:0.30925
Average T:0.27054 C:0.22949 A:0.21140 G:0.28857
Model 1: NearlyNeutral (2 categories)
TREE # 1: (1, 17, (((10, 12, 15, 19, 20, 25, 27, 3, 7, 8, 9), ((((((11, (21, 24, 26)), 23), (16, 18, 6)), 4), (13, 22)), (14, 5))), 2)); MP score: 163
check convergence..
lnL(ntime: 40 np: 43): -1960.622938 +0.000000
28..1 28..17 28..29 29..30 30..31 31..10 31..12 31..15 31..19 31..20 31..25 31..27 31..3 31..7 31..8 31..9 30..32 32..33 33..34 34..35 35..36 36..37 37..11 37..38 38..21 38..24 38..26 36..23 35..39 39..16 39..18 39..6 34..4 33..40 40..13 40..22 32..41 41..14 41..5 29..2
0.004276 0.000004 0.003117 0.119140 0.036777 0.000004 0.000004 0.016866 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.013664 0.015922 0.020442 0.028386 0.022733 0.004204 0.000004 0.004205 0.000004 0.000004 0.000004 0.000004 0.093956 0.000004 0.004242 0.000004 0.029618 0.031327 0.025713 0.000004 0.117400 0.100971 0.103718 0.031792 3.567944 0.853883 0.055318
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.828547
(1: 0.004276, 17: 0.000004, (((10: 0.000004, 12: 0.000004, 15: 0.016866, 19: 0.000004, 20: 0.000004, 25: 0.000004, 27: 0.000004, 3: 0.000004, 7: 0.000004, 8: 0.000004, 9: 0.000004): 0.036777, ((((((11: 0.000004, (21: 0.000004, 24: 0.000004, 26: 0.000004): 0.004205): 0.004204, 23: 0.000004): 0.022733, (16: 0.000004, 18: 0.004242, 6: 0.000004): 0.093956): 0.028386, 4: 0.029618): 0.020442, (13: 0.025713, 22: 0.000004): 0.031327): 0.015922, (14: 0.100971, 5: 0.103718): 0.117400): 0.013664): 0.119140, 2: 0.031792): 0.003117);
(C1: 0.004276, C17: 0.000004, (((C10: 0.000004, C12: 0.000004, C15: 0.016866, C19: 0.000004, C20: 0.000004, C25: 0.000004, C27: 0.000004, C3: 0.000004, C7: 0.000004, C8: 0.000004, C9: 0.000004): 0.036777, ((((((C11: 0.000004, (C21: 0.000004, C24: 0.000004, C26: 0.000004): 0.004205): 0.004204, C23: 0.000004): 0.022733, (C16: 0.000004, C18: 0.004242, C6: 0.000004): 0.093956): 0.028386, C4: 0.029618): 0.020442, (C13: 0.025713, C22: 0.000004): 0.031327): 0.015922, (C14: 0.100971, C5: 0.103718): 0.117400): 0.013664): 0.119140, C2: 0.031792): 0.003117);
Detailed output identifying parameters
kappa (ts/tv) = 3.56794
MLEs of dN/dS (w) for site classes (K=2)
p: 0.85388 0.14612
w: 0.05532 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
28..1 0.004 528.7 200.3 0.1934 0.0007 0.0034 0.4 0.7
28..17 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
28..29 0.003 528.7 200.3 0.1934 0.0005 0.0025 0.3 0.5
29..30 0.119 528.7 200.3 0.1934 0.0185 0.0957 9.8 19.2
30..31 0.037 528.7 200.3 0.1934 0.0057 0.0295 3.0 5.9
31..10 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
31..12 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
31..15 0.017 528.7 200.3 0.1934 0.0026 0.0135 1.4 2.7
31..19 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
31..20 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
31..25 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
31..27 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
31..3 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
31..7 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
31..8 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
31..9 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
30..32 0.014 528.7 200.3 0.1934 0.0021 0.0110 1.1 2.2
32..33 0.016 528.7 200.3 0.1934 0.0025 0.0128 1.3 2.6
33..34 0.020 528.7 200.3 0.1934 0.0032 0.0164 1.7 3.3
34..35 0.028 528.7 200.3 0.1934 0.0044 0.0228 2.3 4.6
35..36 0.023 528.7 200.3 0.1934 0.0035 0.0183 1.9 3.7
36..37 0.004 528.7 200.3 0.1934 0.0007 0.0034 0.3 0.7
37..11 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
37..38 0.004 528.7 200.3 0.1934 0.0007 0.0034 0.3 0.7
38..21 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
38..24 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
38..26 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
36..23 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
35..39 0.094 528.7 200.3 0.1934 0.0146 0.0755 7.7 15.1
39..16 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
39..18 0.004 528.7 200.3 0.1934 0.0007 0.0034 0.3 0.7
39..6 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
34..4 0.030 528.7 200.3 0.1934 0.0046 0.0238 2.4 4.8
33..40 0.031 528.7 200.3 0.1934 0.0049 0.0252 2.6 5.0
40..13 0.026 528.7 200.3 0.1934 0.0040 0.0207 2.1 4.1
40..22 0.000 528.7 200.3 0.1934 0.0000 0.0000 0.0 0.0
32..41 0.117 528.7 200.3 0.1934 0.0182 0.0943 9.6 18.9
41..14 0.101 528.7 200.3 0.1934 0.0157 0.0811 8.3 16.2
41..5 0.104 528.7 200.3 0.1934 0.0161 0.0833 8.5 16.7
29..2 0.032 528.7 200.3 0.1934 0.0049 0.0255 2.6 5.1
Time used: 2:50
Model 2: PositiveSelection (3 categories)
TREE # 1: (1, 17, (((10, 12, 15, 19, 20, 25, 27, 3, 7, 8, 9), ((((((11, (21, 24, 26)), 23), (16, 18, 6)), 4), (13, 22)), (14, 5))), 2)); MP score: 163
lnL(ntime: 40 np: 45): -1958.152340 +0.000000
28..1 28..17 28..29 29..30 30..31 31..10 31..12 31..15 31..19 31..20 31..25 31..27 31..3 31..7 31..8 31..9 30..32 32..33 33..34 34..35 35..36 36..37 37..11 37..38 38..21 38..24 38..26 36..23 35..39 39..16 39..18 39..6 34..4 33..40 40..13 40..22 32..41 41..14 41..5 29..2
0.004298 0.000004 0.003735 0.119254 0.037561 0.000004 0.000004 0.016815 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.013723 0.016197 0.020447 0.027974 0.023502 0.004195 0.000004 0.004195 0.000004 0.000004 0.000004 0.000004 0.094171 0.000004 0.004260 0.000004 0.030358 0.030700 0.025980 0.000004 0.119346 0.103051 0.105780 0.031664 3.691904 0.903856 0.055224 0.084312 2.594402
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.837281
(1: 0.004298, 17: 0.000004, (((10: 0.000004, 12: 0.000004, 15: 0.016815, 19: 0.000004, 20: 0.000004, 25: 0.000004, 27: 0.000004, 3: 0.000004, 7: 0.000004, 8: 0.000004, 9: 0.000004): 0.037561, ((((((11: 0.000004, (21: 0.000004, 24: 0.000004, 26: 0.000004): 0.004195): 0.004195, 23: 0.000004): 0.023502, (16: 0.000004, 18: 0.004260, 6: 0.000004): 0.094171): 0.027974, 4: 0.030358): 0.020447, (13: 0.025980, 22: 0.000004): 0.030700): 0.016197, (14: 0.103051, 5: 0.105780): 0.119346): 0.013723): 0.119254, 2: 0.031664): 0.003735);
(C1: 0.004298, C17: 0.000004, (((C10: 0.000004, C12: 0.000004, C15: 0.016815, C19: 0.000004, C20: 0.000004, C25: 0.000004, C27: 0.000004, C3: 0.000004, C7: 0.000004, C8: 0.000004, C9: 0.000004): 0.037561, ((((((C11: 0.000004, (C21: 0.000004, C24: 0.000004, C26: 0.000004): 0.004195): 0.004195, C23: 0.000004): 0.023502, (C16: 0.000004, C18: 0.004260, C6: 0.000004): 0.094171): 0.027974, C4: 0.030358): 0.020447, (C13: 0.025980, C22: 0.000004): 0.030700): 0.016197, (C14: 0.103051, C5: 0.105780): 0.119346): 0.013723): 0.119254, C2: 0.031664): 0.003735);
Detailed output identifying parameters
kappa (ts/tv) = 3.69190
MLEs of dN/dS (w) for site classes (K=3)
p: 0.90386 0.05522 0.04092
w: 0.08431 1.00000 2.59440
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
28..1 0.004 527.9 201.1 0.2376 0.0008 0.0032 0.4 0.6
28..17 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
28..29 0.004 527.9 201.1 0.2376 0.0007 0.0028 0.3 0.6
29..30 0.119 527.9 201.1 0.2376 0.0211 0.0888 11.1 17.8
30..31 0.038 527.9 201.1 0.2376 0.0066 0.0280 3.5 5.6
31..10 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
31..12 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
31..15 0.017 527.9 201.1 0.2376 0.0030 0.0125 1.6 2.5
31..19 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
31..20 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
31..25 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
31..27 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
31..3 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
31..7 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
31..8 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
31..9 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
30..32 0.014 527.9 201.1 0.2376 0.0024 0.0102 1.3 2.1
32..33 0.016 527.9 201.1 0.2376 0.0029 0.0121 1.5 2.4
33..34 0.020 527.9 201.1 0.2376 0.0036 0.0152 1.9 3.1
34..35 0.028 527.9 201.1 0.2376 0.0049 0.0208 2.6 4.2
35..36 0.024 527.9 201.1 0.2376 0.0042 0.0175 2.2 3.5
36..37 0.004 527.9 201.1 0.2376 0.0007 0.0031 0.4 0.6
37..11 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
37..38 0.004 527.9 201.1 0.2376 0.0007 0.0031 0.4 0.6
38..21 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
38..24 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
38..26 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
36..23 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
35..39 0.094 527.9 201.1 0.2376 0.0167 0.0701 8.8 14.1
39..16 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
39..18 0.004 527.9 201.1 0.2376 0.0008 0.0032 0.4 0.6
39..6 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
34..4 0.030 527.9 201.1 0.2376 0.0054 0.0226 2.8 4.5
33..40 0.031 527.9 201.1 0.2376 0.0054 0.0228 2.9 4.6
40..13 0.026 527.9 201.1 0.2376 0.0046 0.0193 2.4 3.9
40..22 0.000 527.9 201.1 0.2376 0.0000 0.0000 0.0 0.0
32..41 0.119 527.9 201.1 0.2376 0.0211 0.0888 11.1 17.9
41..14 0.103 527.9 201.1 0.2376 0.0182 0.0767 9.6 15.4
41..5 0.106 527.9 201.1 0.2376 0.0187 0.0787 9.9 15.8
29..2 0.032 527.9 201.1 0.2376 0.0056 0.0236 3.0 4.7
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
46 V 0.906 2.445
49 R 0.707 2.103
123 P 0.891 2.420
131 V 0.872 2.390
228 G 0.703 2.115
232 R 0.872 2.390
236 T 0.789 2.257
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
46 V 0.803 2.506 +- 1.292
49 R 0.566 1.974 +- 1.229
123 P 0.793 2.524 +- 1.338
131 V 0.760 2.435 +- 1.317
228 G 0.535 1.870 +- 1.122
232 R 0.756 2.417 +- 1.302
236 T 0.631 2.092 +- 1.203
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 0.902 0.098 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.271 0.350 0.229 0.099 0.034 0.011 0.004 0.001 0.001 0.000
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.006
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.013 0.571
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.054 0.237 0.119
sum of density on p0-p1 = 1.000000
Time used: 7:47
Model 7: beta (10 categories)
TREE # 1: (1, 17, (((10, 12, 15, 19, 20, 25, 27, 3, 7, 8, 9), ((((((11, (21, 24, 26)), 23), (16, 18, 6)), 4), (13, 22)), (14, 5))), 2)); MP score: 163
lnL(ntime: 40 np: 43): -1961.930879 +0.000000
28..1 28..17 28..29 29..30 30..31 31..10 31..12 31..15 31..19 31..20 31..25 31..27 31..3 31..7 31..8 31..9 30..32 32..33 33..34 34..35 35..36 36..37 37..11 37..38 38..21 38..24 38..26 36..23 35..39 39..16 39..18 39..6 34..4 33..40 40..13 40..22 32..41 41..14 41..5 29..2
0.004269 0.000004 0.002288 0.119910 0.036564 0.000004 0.000004 0.016854 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.013771 0.015876 0.020458 0.028356 0.022671 0.004203 0.000004 0.004204 0.000004 0.000004 0.000004 0.000004 0.093879 0.000004 0.004239 0.000004 0.029493 0.031312 0.025662 0.000004 0.117034 0.100838 0.103205 0.032552 3.612013 0.082254 0.322872
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.827716
(1: 0.004269, 17: 0.000004, (((10: 0.000004, 12: 0.000004, 15: 0.016854, 19: 0.000004, 20: 0.000004, 25: 0.000004, 27: 0.000004, 3: 0.000004, 7: 0.000004, 8: 0.000004, 9: 0.000004): 0.036564, ((((((11: 0.000004, (21: 0.000004, 24: 0.000004, 26: 0.000004): 0.004204): 0.004203, 23: 0.000004): 0.022671, (16: 0.000004, 18: 0.004239, 6: 0.000004): 0.093879): 0.028356, 4: 0.029493): 0.020458, (13: 0.025662, 22: 0.000004): 0.031312): 0.015876, (14: 0.100838, 5: 0.103205): 0.117034): 0.013771): 0.119910, 2: 0.032552): 0.002288);
(C1: 0.004269, C17: 0.000004, (((C10: 0.000004, C12: 0.000004, C15: 0.016854, C19: 0.000004, C20: 0.000004, C25: 0.000004, C27: 0.000004, C3: 0.000004, C7: 0.000004, C8: 0.000004, C9: 0.000004): 0.036564, ((((((C11: 0.000004, (C21: 0.000004, C24: 0.000004, C26: 0.000004): 0.004204): 0.004203, C23: 0.000004): 0.022671, (C16: 0.000004, C18: 0.004239, C6: 0.000004): 0.093879): 0.028356, C4: 0.029493): 0.020458, (C13: 0.025662, C22: 0.000004): 0.031312): 0.015876, (C14: 0.100838, C5: 0.103205): 0.117034): 0.013771): 0.119910, C2: 0.032552): 0.002288);
Detailed output identifying parameters
kappa (ts/tv) = 3.61201
Parameters in M7 (beta):
p = 0.08225 q = 0.32287
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00000 0.00003 0.00063 0.00725 0.05364 0.26270 0.71839 0.98836
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
28..1 0.004 528.4 200.6 0.2031 0.0007 0.0034 0.4 0.7
28..17 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
28..29 0.002 528.4 200.6 0.2031 0.0004 0.0018 0.2 0.4
29..30 0.120 528.4 200.6 0.2031 0.0192 0.0946 10.2 19.0
30..31 0.037 528.4 200.6 0.2031 0.0059 0.0289 3.1 5.8
31..10 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
31..12 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
31..15 0.017 528.4 200.6 0.2031 0.0027 0.0133 1.4 2.7
31..19 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
31..20 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
31..25 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
31..27 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
31..3 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
31..7 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
31..8 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
31..9 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
30..32 0.014 528.4 200.6 0.2031 0.0022 0.0109 1.2 2.2
32..33 0.016 528.4 200.6 0.2031 0.0025 0.0125 1.3 2.5
33..34 0.020 528.4 200.6 0.2031 0.0033 0.0161 1.7 3.2
34..35 0.028 528.4 200.6 0.2031 0.0045 0.0224 2.4 4.5
35..36 0.023 528.4 200.6 0.2031 0.0036 0.0179 1.9 3.6
36..37 0.004 528.4 200.6 0.2031 0.0007 0.0033 0.4 0.7
37..11 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
37..38 0.004 528.4 200.6 0.2031 0.0007 0.0033 0.4 0.7
38..21 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
38..24 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
38..26 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
36..23 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
35..39 0.094 528.4 200.6 0.2031 0.0150 0.0741 8.0 14.9
39..16 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
39..18 0.004 528.4 200.6 0.2031 0.0007 0.0033 0.4 0.7
39..6 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
34..4 0.029 528.4 200.6 0.2031 0.0047 0.0233 2.5 4.7
33..40 0.031 528.4 200.6 0.2031 0.0050 0.0247 2.7 5.0
40..13 0.026 528.4 200.6 0.2031 0.0041 0.0203 2.2 4.1
40..22 0.000 528.4 200.6 0.2031 0.0000 0.0000 0.0 0.0
32..41 0.117 528.4 200.6 0.2031 0.0188 0.0924 9.9 18.5
41..14 0.101 528.4 200.6 0.2031 0.0162 0.0796 8.5 16.0
41..5 0.103 528.4 200.6 0.2031 0.0165 0.0815 8.7 16.3
29..2 0.033 528.4 200.6 0.2031 0.0052 0.0257 2.8 5.2
Time used: 19:18
Model 8: beta&w>1 (11 categories)
TREE # 1: (1, 17, (((10, 12, 15, 19, 20, 25, 27, 3, 7, 8, 9), ((((((11, (21, 24, 26)), 23), (16, 18, 6)), 4), (13, 22)), (14, 5))), 2)); MP score: 163
lnL(ntime: 40 np: 45): -1957.821633 +0.000000
28..1 28..17 28..29 29..30 30..31 31..10 31..12 31..15 31..19 31..20 31..25 31..27 31..3 31..7 31..8 31..9 30..32 32..33 33..34 34..35 35..36 36..37 37..11 37..38 38..21 38..24 38..26 36..23 35..39 39..16 39..18 39..6 34..4 33..40 40..13 40..22 32..41 41..14 41..5 29..2
0.004306 0.000004 0.003576 0.119766 0.037727 0.000004 0.000004 0.016829 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.013753 0.016237 0.020555 0.027703 0.023808 0.004199 0.000004 0.004200 0.000004 0.000004 0.000004 0.000004 0.094209 0.000004 0.004270 0.000004 0.030474 0.030635 0.026050 0.000004 0.119831 0.103495 0.105896 0.031973 3.691829 0.955431 0.444382 3.030326 2.659162
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.839566
(1: 0.004306, 17: 0.000004, (((10: 0.000004, 12: 0.000004, 15: 0.016829, 19: 0.000004, 20: 0.000004, 25: 0.000004, 27: 0.000004, 3: 0.000004, 7: 0.000004, 8: 0.000004, 9: 0.000004): 0.037727, ((((((11: 0.000004, (21: 0.000004, 24: 0.000004, 26: 0.000004): 0.004200): 0.004199, 23: 0.000004): 0.023808, (16: 0.000004, 18: 0.004270, 6: 0.000004): 0.094209): 0.027703, 4: 0.030474): 0.020555, (13: 0.026050, 22: 0.000004): 0.030635): 0.016237, (14: 0.103495, 5: 0.105896): 0.119831): 0.013753): 0.119766, 2: 0.031973): 0.003576);
(C1: 0.004306, C17: 0.000004, (((C10: 0.000004, C12: 0.000004, C15: 0.016829, C19: 0.000004, C20: 0.000004, C25: 0.000004, C27: 0.000004, C3: 0.000004, C7: 0.000004, C8: 0.000004, C9: 0.000004): 0.037727, ((((((C11: 0.000004, (C21: 0.000004, C24: 0.000004, C26: 0.000004): 0.004200): 0.004199, C23: 0.000004): 0.023808, (C16: 0.000004, C18: 0.004270, C6: 0.000004): 0.094209): 0.027703, C4: 0.030474): 0.020555, (C13: 0.026050, C22: 0.000004): 0.030635): 0.016237, (C14: 0.103495, C5: 0.105896): 0.119831): 0.013753): 0.119766, C2: 0.031973): 0.003576);
Detailed output identifying parameters
kappa (ts/tv) = 3.69183
Parameters in M8 (beta&w>1):
p0 = 0.95543 p = 0.44438 q = 3.03033
(p1 = 0.04457) w = 2.65916
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09554 0.09554 0.09554 0.09554 0.09554 0.09554 0.09554 0.09554 0.09554 0.09554 0.04457
w: 0.00033 0.00387 0.01237 0.02693 0.04890 0.08027 0.12437 0.18752 0.28454 0.47296 2.65916
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
28..1 0.004 527.9 201.1 0.2372 0.0008 0.0032 0.4 0.6
28..17 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
28..29 0.004 527.9 201.1 0.2372 0.0006 0.0027 0.3 0.5
29..30 0.120 527.9 201.1 0.2372 0.0212 0.0892 11.2 17.9
30..31 0.038 527.9 201.1 0.2372 0.0067 0.0281 3.5 5.6
31..10 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
31..12 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
31..15 0.017 527.9 201.1 0.2372 0.0030 0.0125 1.6 2.5
31..19 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
31..20 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
31..25 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
31..27 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
31..3 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
31..7 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
31..8 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
31..9 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
30..32 0.014 527.9 201.1 0.2372 0.0024 0.0102 1.3 2.1
32..33 0.016 527.9 201.1 0.2372 0.0029 0.0121 1.5 2.4
33..34 0.021 527.9 201.1 0.2372 0.0036 0.0153 1.9 3.1
34..35 0.028 527.9 201.1 0.2372 0.0049 0.0206 2.6 4.1
35..36 0.024 527.9 201.1 0.2372 0.0042 0.0177 2.2 3.6
36..37 0.004 527.9 201.1 0.2372 0.0007 0.0031 0.4 0.6
37..11 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
37..38 0.004 527.9 201.1 0.2372 0.0007 0.0031 0.4 0.6
38..21 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
38..24 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
38..26 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
36..23 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
35..39 0.094 527.9 201.1 0.2372 0.0166 0.0702 8.8 14.1
39..16 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
39..18 0.004 527.9 201.1 0.2372 0.0008 0.0032 0.4 0.6
39..6 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
34..4 0.030 527.9 201.1 0.2372 0.0054 0.0227 2.8 4.6
33..40 0.031 527.9 201.1 0.2372 0.0054 0.0228 2.9 4.6
40..13 0.026 527.9 201.1 0.2372 0.0046 0.0194 2.4 3.9
40..22 0.000 527.9 201.1 0.2372 0.0000 0.0000 0.0 0.0
32..41 0.120 527.9 201.1 0.2372 0.0212 0.0892 11.2 17.9
41..14 0.103 527.9 201.1 0.2372 0.0183 0.0771 9.7 15.5
41..5 0.106 527.9 201.1 0.2372 0.0187 0.0789 9.9 15.9
29..2 0.032 527.9 201.1 0.2372 0.0056 0.0238 3.0 4.8
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
46 V 0.991** 2.639
49 R 0.823 2.258
123 P 0.982* 2.619
131 V 0.977* 2.608
228 G 0.869 2.366
232 R 0.977* 2.609
236 T 0.948 2.543
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
46 V 0.960* 2.680 +- 0.857
49 R 0.783 2.294 +- 1.111
123 P 0.947 2.659 +- 0.885
131 V 0.937 2.636 +- 0.901
228 G 0.794 2.307 +- 1.061
232 R 0.936 2.634 +- 0.900
236 T 0.880 2.506 +- 0.971
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.018 0.982
p : 0.799 0.200 0.002 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.025 0.116 0.167 0.156 0.130 0.119 0.130 0.157
ws: 0.124 0.579 0.235 0.050 0.009 0.002 0.000 0.000 0.000 0.000
Time used: 34:28
Model 1: NearlyNeutral -1960.622938
Model 2: PositiveSelection -1958.152340
Model 7: beta -1961.930879
Model 8: beta&w>1 -1957.821633
Model 2 vs 1 4.941196
Model 8 vs 7 8.218492
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
46 V 0.991** 2.639
49 R 0.823 2.258
123 P 0.982* 2.619
131 V 0.977* 2.608
228 G 0.869 2.366
232 R 0.977* 2.609
236 T 0.948 2.543
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
46 V 0.960* 2.680 +- 0.857
49 R 0.783 2.294 +- 1.111
123 P 0.947 2.659 +- 0.885
131 V 0.937 2.636 +- 0.901
228 G 0.794 2.307 +- 1.061
232 R 0.936 2.634 +- 0.900
236 T 0.880 2.506 +- 0.971
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
