--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1861.38 -1892.42
2 -1860.30 -1890.60
--------------------------------------
TOTAL -1860.70 -1891.87
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.078192 0.000141 0.056898 0.101899 0.077215 732.97 857.04 1.000
r(A<->C){all} 0.072390 0.001366 0.011023 0.143326 0.066258 461.47 538.30 1.000
r(A<->G){all} 0.176295 0.001829 0.099648 0.261799 0.172317 664.06 730.51 1.000
r(A<->T){all} 0.039584 0.000253 0.013886 0.072311 0.037492 639.21 817.09 1.000
r(C<->G){all} 0.071055 0.001934 0.002946 0.157102 0.062282 426.55 586.46 1.000
r(C<->T){all} 0.571892 0.004041 0.440000 0.686545 0.571609 468.31 529.95 1.000
r(G<->T){all} 0.068786 0.000638 0.024710 0.118966 0.065878 716.91 739.15 1.000
pi(A){all} 0.303315 0.000181 0.276525 0.328321 0.302874 884.54 950.27 1.000
pi(C){all} 0.110607 0.000084 0.093916 0.129083 0.110425 1048.83 1096.80 1.000
pi(G){all} 0.203141 0.000139 0.180112 0.225931 0.202833 876.70 972.42 1.000
pi(T){all} 0.382936 0.000203 0.356176 0.411129 0.382978 925.90 970.63 1.000
alpha{1,2} 0.416330 0.404146 0.000109 1.668365 0.188343 953.57 991.32 1.000
alpha{3} 2.106430 1.611899 0.238352 4.579625 1.812278 1118.96 1265.50 1.000
pinvar{all} 0.230729 0.023074 0.000033 0.503592 0.215849 903.29 907.30 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -1756.408119
Model 2: PositiveSelection -1756.294110
Model 7: beta -1756.488869
Model 8: beta&w>1 -1756.295842
Model 2 vs 1 .228018
Model 8 vs 7 .386054
-- Starting log on Wed Nov 23 21:53:42 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.15 sec, SCORE=1000, Nseq=38, Len=374
C1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C2 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C3 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C4 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C5 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C6 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFP
C7 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFP
C8 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFP
C9 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C10 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C11 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C12 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C13 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C14 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C15 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C16 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C17 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C18 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C19 SLENVVYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C20 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C21 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C22 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C23 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C24 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C25 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C26 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C27 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C28 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C29 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C30 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C31 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C32 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C33 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C34 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C35 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C36 SLENVIYNLFNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C37 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C38 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
*****:***.*.****** *******:*********************:*
C1 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C2 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C3 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C4 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C5 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C6 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C7 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C8 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C9 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C10 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C11 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C12 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C13 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C14 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C15 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C16 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C17 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C18 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C19 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C20 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C21 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C22 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C23 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C24 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C25 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C26 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C27 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C28 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C29 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C30 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C31 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C32 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C33 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C34 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C35 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C36 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C37 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C38 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
**************************************************
C1 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C2 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C3 VCKYTDLQFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C4 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C5 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C6 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C7 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C8 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C9 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C10 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C11 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C12 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C13 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C14 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C15 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C16 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C17 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C18 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C19 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C20 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C21 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C22 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C23 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C24 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C25 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C26 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C27 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C28 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C29 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C30 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C31 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C32 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C33 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C34 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C35 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C36 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C37 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C38 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
*******:******:******.***************** *** ******
C1 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C2 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C3 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C4 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C5 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C6 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C7 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C8 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C9 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C10 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C11 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C12 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C13 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C14 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C15 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C16 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C17 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C18 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C19 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C20 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C21 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C22 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C23 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C24 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C25 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C26 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C27 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C28 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C29 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C30 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C31 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C32 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C33 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C34 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C35 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C36 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C37 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C38 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
*****************:******************:***..********
C1 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C2 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C3 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C4 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C5 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C6 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C7 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C8 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C9 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C10 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C11 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C12 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C13 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C14 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C15 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C16 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C17 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C18 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C19 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C20 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C21 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C22 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C23 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C24 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C25 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C26 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C27 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C28 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C29 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C30 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C31 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C32 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C33 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C34 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C35 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C36 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C37 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C38 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
*********. *****:************:**************:*.***
C1 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C2 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C3 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRQKKSNLLIQEFLQYD
C4 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRKKKSNLLIQEFLQYD
C5 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C6 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C7 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C8 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C9 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C10 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C11 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C12 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C13 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C14 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C15 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C16 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C17 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C18 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C19 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C20 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C21 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C22 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C23 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C24 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C25 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C26 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C27 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C28 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C29 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C30 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C31 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRKKKSNLLIQEFLQYD
C32 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C33 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C34 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C35 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C36 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C37 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C38 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
*******************:*************** *****:********
C1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C2 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C3 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C4 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C5 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C6 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C7 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C8 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C9 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C10 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C11 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C12 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
C13 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C14 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C15 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C16 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C17 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C18 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C19 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C20 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
C21 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C22 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C23 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C24 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C25 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C26 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C27 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C28 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C29 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C30 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
C31 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C32 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C33 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C34 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C35 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLSCVSKVVNINV
C36 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C37 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
C38 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
******************************* *******.**********
C1 DFKDFQFMLWCNDNKIMTFYPKMQ
C2 DFKDFQFMLWCNDNKIMTFYPKMQ
C3 DFKDFQFMLWCNDNKIMTFYPKMQ
C4 DFKDFQFMLWCNDNKIMTFYPKMQ
C5 DFKDFQFMLWCNDNKIMTFYPKMQ
C6 DFKDFQFMLWCNDNKIMTFYPKMQ
C7 DFKDFQFMLWCNDNKIMTFYPKMQ
C8 DFKDFQFMLWCNDNKIMTFYPKMQ
C9 DFKDFQFMLWCNDNKIMTFYPKMQ
C10 DFKDFQFMLWCNDNKIMTFYPKMQ
C11 DFKDFQFMLWCNDNKIMTFYPKMQ
C12 DFKDFQFMLWCNDNKIMTFYPKMQ
C13 DFKDFQFMLWCNDNKIMTFYPKMQ
C14 DFKDFQFMLWCNDNKIMTFYPKMQ
C15 DFKDFQFMLWCNDNKIMTFYPKMQ
C16 DFKDFQFMLWCNDNKIMTFYPKMQ
C17 DFKDFQFMLWCNDNKIMTFYPKMQ
C18 DFKDFQFMLWCNDNKIMTFYPKMQ
C19 DFKDFQFMLWCNDNKIMTFYPKMQ
C20 DFKDFQFMLWCNDNKIMTFYPKMQ
C21 DFKDFQFMLWCNDHKIMTFYPKMQ
C22 DFKDFQFMLWCNDNKIMTFYPKMQ
C23 DFKDFQFMLWCNDNKIMTFYPKMQ
C24 DFKDFQFMLWCNDNKIMTFYPKMQ
C25 DFKDFQFMLWCNDHKIMTFYPKMQ
C26 DFKDFQFMLWCNDNKIMTFYPKMQ
C27 DFKDFQFMLWCNDNKIMTFYPKMQ
C28 DFKDFQFMLWCNDNKIMTFYPKMQ
C29 DFKDFQFMLWCNDNKIMTFYPKMQ
C30 DFKDFQFMLWCNDNKIMTFYPKMQ
C31 DFKDFQFMLWCNDNKIMTFYPKMQ
C32 DFKDFQFMLWCNDNKIMTFYPKMQ
C33 DFKDFQFMLWCNDNKIMTFYPKMQ
C34 DFKDFQFMLWCNDNKIMTFYPKMQ
C35 DFKDFQFMLWCNDNKIMTFYPKMQ
C36 DFKDFQFMLWCNDNKIMTFYPKMQ
C37 DFKDFQFMLWCNDNKIMTFYPKMQ
C38 DFKDFQFMLWCNDNKIMTFYPKMQ
*************:**********
-- Starting log on Wed Nov 23 21:54:20 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.93 sec, SCORE=1000, Nseq=38, Len=374
C1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C2 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C3 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C4 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C5 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C6 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFP
C7 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFP
C8 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFP
C9 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C10 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C11 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C12 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C13 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C14 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C15 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C16 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C17 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C18 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C19 SLENVVYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C20 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C21 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C22 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C23 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C24 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C25 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C26 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C27 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C28 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C29 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C30 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C31 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C32 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C33 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C34 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C35 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C36 SLENVIYNLFNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C37 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C38 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
*****:***.*.****** *******:*********************:*
C1 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C2 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C3 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C4 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C5 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C6 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C7 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C8 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C9 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C10 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C11 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C12 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C13 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C14 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C15 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C16 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C17 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C18 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C19 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C20 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C21 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C22 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C23 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C24 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C25 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C26 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C27 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C28 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C29 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C30 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C31 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C32 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C33 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C34 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C35 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C36 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C37 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C38 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
**************************************************
C1 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C2 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C3 VCKYTDLQFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C4 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C5 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C6 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C7 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C8 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C9 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C10 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C11 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C12 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C13 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C14 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C15 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C16 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C17 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C18 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C19 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C20 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C21 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C22 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C23 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C24 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C25 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C26 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C27 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C28 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C29 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C30 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C31 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C32 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C33 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C34 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C35 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C36 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C37 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C38 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
*******:******:******.***************** *** ******
C1 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C2 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C3 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C4 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C5 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C6 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C7 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C8 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C9 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C10 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C11 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C12 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C13 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C14 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C15 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C16 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C17 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C18 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C19 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C20 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C21 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C22 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C23 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C24 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C25 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C26 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C27 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C28 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C29 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C30 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C31 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C32 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C33 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C34 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C35 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C36 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C37 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C38 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
*****************:******************:***..********
C1 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C2 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C3 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C4 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C5 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C6 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C7 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C8 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C9 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C10 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C11 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C12 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C13 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C14 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C15 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C16 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C17 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C18 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C19 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C20 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C21 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C22 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C23 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C24 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C25 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C26 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C27 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C28 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C29 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C30 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C31 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C32 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C33 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C34 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C35 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C36 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C37 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C38 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
*********. *****:************:**************:*.***
C1 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C2 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C3 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRQKKSNLLIQEFLQYD
C4 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRKKKSNLLIQEFLQYD
C5 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C6 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C7 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C8 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C9 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C10 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C11 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C12 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C13 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C14 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C15 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C16 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C17 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C18 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C19 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C20 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C21 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C22 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C23 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C24 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C25 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C26 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C27 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C28 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C29 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C30 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C31 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRKKKSNLLIQEFLQYD
C32 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C33 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C34 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C35 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C36 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C37 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C38 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
*******************:*************** *****:********
C1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C2 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C3 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C4 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C5 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C6 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C7 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C8 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C9 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C10 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C11 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C12 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
C13 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C14 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C15 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C16 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C17 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C18 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C19 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C20 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
C21 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C22 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C23 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C24 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C25 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C26 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C27 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C28 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C29 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C30 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
C31 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C32 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C33 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C34 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C35 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLSCVSKVVNINV
C36 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C37 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
C38 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
******************************* *******.**********
C1 DFKDFQFMLWCNDNKIMTFYPKMQ
C2 DFKDFQFMLWCNDNKIMTFYPKMQ
C3 DFKDFQFMLWCNDNKIMTFYPKMQ
C4 DFKDFQFMLWCNDNKIMTFYPKMQ
C5 DFKDFQFMLWCNDNKIMTFYPKMQ
C6 DFKDFQFMLWCNDNKIMTFYPKMQ
C7 DFKDFQFMLWCNDNKIMTFYPKMQ
C8 DFKDFQFMLWCNDNKIMTFYPKMQ
C9 DFKDFQFMLWCNDNKIMTFYPKMQ
C10 DFKDFQFMLWCNDNKIMTFYPKMQ
C11 DFKDFQFMLWCNDNKIMTFYPKMQ
C12 DFKDFQFMLWCNDNKIMTFYPKMQ
C13 DFKDFQFMLWCNDNKIMTFYPKMQ
C14 DFKDFQFMLWCNDNKIMTFYPKMQ
C15 DFKDFQFMLWCNDNKIMTFYPKMQ
C16 DFKDFQFMLWCNDNKIMTFYPKMQ
C17 DFKDFQFMLWCNDNKIMTFYPKMQ
C18 DFKDFQFMLWCNDNKIMTFYPKMQ
C19 DFKDFQFMLWCNDNKIMTFYPKMQ
C20 DFKDFQFMLWCNDNKIMTFYPKMQ
C21 DFKDFQFMLWCNDHKIMTFYPKMQ
C22 DFKDFQFMLWCNDNKIMTFYPKMQ
C23 DFKDFQFMLWCNDNKIMTFYPKMQ
C24 DFKDFQFMLWCNDNKIMTFYPKMQ
C25 DFKDFQFMLWCNDHKIMTFYPKMQ
C26 DFKDFQFMLWCNDNKIMTFYPKMQ
C27 DFKDFQFMLWCNDNKIMTFYPKMQ
C28 DFKDFQFMLWCNDNKIMTFYPKMQ
C29 DFKDFQFMLWCNDNKIMTFYPKMQ
C30 DFKDFQFMLWCNDNKIMTFYPKMQ
C31 DFKDFQFMLWCNDNKIMTFYPKMQ
C32 DFKDFQFMLWCNDNKIMTFYPKMQ
C33 DFKDFQFMLWCNDNKIMTFYPKMQ
C34 DFKDFQFMLWCNDNKIMTFYPKMQ
C35 DFKDFQFMLWCNDNKIMTFYPKMQ
C36 DFKDFQFMLWCNDNKIMTFYPKMQ
C37 DFKDFQFMLWCNDNKIMTFYPKMQ
C38 DFKDFQFMLWCNDNKIMTFYPKMQ
*************:**********
-- Starting log on Wed Nov 23 22:58:01 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result/gapped_alignment/codeml,BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 30 taxa and 1122 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C11
Taxon 4 -> C12
Taxon 5 -> C14
Taxon 6 -> C15
Taxon 7 -> C16
Taxon 8 -> C18
Taxon 9 -> C19
Taxon 10 -> C2
Taxon 11 -> C21
Taxon 12 -> C22
Taxon 13 -> C23
Taxon 14 -> C24
Taxon 15 -> C25
Taxon 16 -> C26
Taxon 17 -> C28
Taxon 18 -> C30
Taxon 19 -> C31
Taxon 20 -> C33
Taxon 21 -> C34
Taxon 22 -> C35
Taxon 23 -> C37
Taxon 24 -> C38
Taxon 25 -> C4
Taxon 26 -> C5
Taxon 27 -> C6
Taxon 28 -> C7
Taxon 29 -> C8
Taxon 30 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1669244283
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 2088335588
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 1826296599
Seed = 81879217
Swapseed = 1669244283
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 12 unique site patterns
Division 2 has 12 unique site patterns
Division 3 has 19 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -3776.263230 -- 82.122948
Chain 2 -- -4078.875579 -- 82.122948
Chain 3 -- -4063.071566 -- 82.122948
Chain 4 -- -4033.037061 -- 82.122948
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -4075.689072 -- 82.122948
Chain 2 -- -3799.839838 -- 82.122948
Chain 3 -- -4028.821312 -- 82.122948
Chain 4 -- -4067.222076 -- 82.122948
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-3776.263] (-4078.876) (-4063.072) (-4033.037) * [-4075.689] (-3799.840) (-4028.821) (-4067.222)
1000 -- (-2034.943) [-1958.935] (-2000.539) (-2156.879) * (-2673.188) (-2088.804) [-2002.224] (-2054.295) -- 0:16:39
2000 -- [-1896.554] (-1912.094) (-1940.796) (-2009.728) * (-1951.616) (-1939.521) (-1926.937) [-1916.160] -- 0:16:38
3000 -- (-1882.183) [-1887.469] (-1905.539) (-1917.702) * (-1910.527) [-1884.479] (-1909.692) (-1882.971) -- 0:11:04
4000 -- [-1859.953] (-1881.205) (-1898.608) (-1911.533) * (-1883.196) (-1877.827) (-1904.133) [-1875.801] -- 0:12:27
5000 -- (-1873.462) [-1872.770] (-1879.798) (-1914.630) * (-1881.559) (-1891.138) (-1889.862) [-1878.412] -- 0:13:16
Average standard deviation of split frequencies: 0.084220
6000 -- [-1870.166] (-1868.534) (-1887.016) (-1889.527) * (-1871.640) (-1889.101) (-1874.920) [-1875.989] -- 0:13:48
7000 -- (-1883.114) (-1876.428) (-1882.151) [-1880.383] * (-1912.847) (-1889.521) [-1879.592] (-1868.373) -- 0:11:49
8000 -- (-1897.541) (-1889.631) [-1879.771] (-1868.607) * (-1894.964) (-1893.313) (-1891.487) [-1863.827] -- 0:12:24
9000 -- (-1892.058) [-1871.055] (-1867.547) (-1900.893) * (-1883.520) (-1883.422) (-1890.283) [-1867.308] -- 0:12:50
10000 -- (-1890.719) [-1888.958] (-1879.442) (-1879.180) * (-1878.902) (-1881.558) (-1893.171) [-1869.348] -- 0:11:33
Average standard deviation of split frequencies: 0.093210
11000 -- (-1896.722) (-1885.958) (-1882.419) [-1874.024] * (-1876.398) (-1899.449) (-1872.496) [-1872.447] -- 0:11:59
12000 -- (-1913.777) [-1870.839] (-1889.054) (-1892.957) * (-1880.941) (-1908.837) [-1875.473] (-1885.390) -- 0:12:21
13000 -- (-1902.733) [-1882.819] (-1885.145) (-1892.644) * (-1896.523) (-1892.769) [-1878.923] (-1870.777) -- 0:12:39
14000 -- (-1880.777) [-1890.941] (-1878.027) (-1874.141) * (-1881.882) (-1891.367) (-1891.488) [-1871.054] -- 0:12:54
15000 -- (-1873.065) (-1896.765) [-1886.971] (-1883.182) * (-1880.386) (-1883.490) (-1882.739) [-1873.527] -- 0:12:02
Average standard deviation of split frequencies: 0.073259
16000 -- (-1877.617) (-1882.442) [-1873.777] (-1876.369) * (-1877.843) [-1866.695] (-1887.420) (-1876.339) -- 0:12:18
17000 -- (-1878.761) (-1898.810) [-1883.518] (-1898.674) * (-1905.435) (-1869.338) (-1881.568) [-1863.937] -- 0:12:31
18000 -- (-1877.146) (-1897.342) [-1870.707] (-1880.254) * (-1896.945) (-1873.607) (-1887.325) [-1871.155] -- 0:12:43
19000 -- (-1899.064) (-1902.349) [-1873.215] (-1881.755) * (-1881.219) (-1883.215) [-1873.246] (-1879.260) -- 0:12:02
20000 -- (-1909.873) [-1874.888] (-1869.920) (-1880.597) * (-1885.151) (-1872.437) (-1885.977) [-1862.095] -- 0:12:15
Average standard deviation of split frequencies: 0.057393
21000 -- (-1888.262) (-1872.171) [-1873.337] (-1908.604) * (-1874.833) (-1886.591) (-1885.127) [-1882.997] -- 0:12:25
22000 -- (-1891.511) (-1871.771) [-1872.556] (-1891.388) * (-1872.833) (-1867.692) (-1902.477) [-1891.818] -- 0:12:35
23000 -- (-1875.680) [-1865.964] (-1883.825) (-1883.892) * (-1880.161) [-1882.492] (-1887.007) (-1902.457) -- 0:12:02
24000 -- (-1872.595) (-1873.835) [-1874.032] (-1885.094) * [-1874.780] (-1907.622) (-1883.070) (-1888.505) -- 0:12:12
25000 -- (-1872.558) [-1870.910] (-1889.534) (-1882.274) * [-1869.151] (-1887.153) (-1891.023) (-1876.251) -- 0:12:21
Average standard deviation of split frequencies: 0.041162
26000 -- (-1885.307) (-1879.866) [-1876.636] (-1893.971) * (-1869.683) (-1902.682) [-1875.915] (-1867.265) -- 0:12:29
27000 -- (-1892.089) [-1878.567] (-1884.885) (-1866.079) * (-1886.005) (-1885.260) [-1866.665] (-1879.467) -- 0:12:00
28000 -- (-1884.790) [-1877.482] (-1876.439) (-1858.750) * (-1875.381) (-1898.194) (-1884.399) [-1878.251] -- 0:12:09
29000 -- [-1868.772] (-1876.559) (-1892.716) (-1884.339) * (-1898.351) (-1889.921) [-1876.550] (-1901.469) -- 0:12:16
30000 -- (-1874.303) (-1881.032) [-1877.332] (-1867.147) * [-1876.563] (-1891.036) (-1876.981) (-1906.859) -- 0:11:51
Average standard deviation of split frequencies: 0.037917
31000 -- (-1878.595) [-1873.892] (-1885.812) (-1875.036) * [-1861.526] (-1887.094) (-1884.882) (-1911.649) -- 0:11:58
32000 -- [-1875.175] (-1878.846) (-1891.984) (-1877.136) * [-1868.264] (-1905.469) (-1886.975) (-1881.247) -- 0:12:06
33000 -- (-1880.264) (-1894.391) [-1868.749] (-1881.859) * (-1893.038) (-1879.512) (-1881.417) [-1878.101] -- 0:12:12
34000 -- (-1865.893) (-1876.639) (-1888.298) [-1870.974] * (-1883.687) (-1900.446) (-1881.506) [-1881.140] -- 0:11:50
35000 -- (-1866.803) [-1871.839] (-1883.701) (-1892.276) * [-1874.183] (-1892.586) (-1884.373) (-1877.926) -- 0:11:56
Average standard deviation of split frequencies: 0.027700
36000 -- (-1879.979) (-1883.719) [-1877.828] (-1871.621) * (-1880.268) (-1893.848) (-1868.922) [-1868.458] -- 0:12:03
37000 -- (-1877.044) (-1886.189) [-1874.578] (-1894.285) * (-1870.574) (-1897.610) [-1879.401] (-1883.051) -- 0:11:42
38000 -- [-1874.064] (-1871.899) (-1885.332) (-1881.109) * [-1874.711] (-1882.721) (-1884.814) (-1887.897) -- 0:11:48
39000 -- (-1872.035) (-1888.650) [-1872.080] (-1882.390) * (-1896.745) (-1877.231) (-1880.033) [-1863.087] -- 0:11:54
40000 -- [-1869.407] (-1872.562) (-1873.787) (-1886.580) * (-1889.312) (-1873.476) [-1872.104] (-1867.733) -- 0:12:00
Average standard deviation of split frequencies: 0.027048
41000 -- [-1879.178] (-1865.501) (-1889.434) (-1884.976) * (-1899.504) (-1887.273) (-1864.915) [-1877.406] -- 0:11:41
42000 -- [-1868.499] (-1898.745) (-1877.544) (-1879.928) * (-1881.794) (-1873.340) (-1886.311) [-1878.093] -- 0:11:47
43000 -- (-1870.382) [-1867.612] (-1885.653) (-1885.637) * (-1895.909) [-1874.862] (-1877.188) (-1867.508) -- 0:11:52
44000 -- (-1876.330) [-1870.454] (-1903.508) (-1874.184) * (-1879.012) (-1882.980) (-1880.558) [-1885.657] -- 0:11:57
45000 -- (-1876.566) (-1869.533) [-1871.531] (-1879.756) * (-1894.717) (-1894.072) (-1875.549) [-1874.106] -- 0:11:40
Average standard deviation of split frequencies: 0.024185
46000 -- (-1882.053) [-1866.885] (-1872.482) (-1879.296) * [-1872.574] (-1884.543) (-1873.392) (-1877.255) -- 0:11:45
47000 -- (-1872.838) [-1871.337] (-1894.494) (-1878.709) * (-1884.714) (-1869.744) [-1866.242] (-1877.964) -- 0:11:29
48000 -- (-1887.167) [-1871.306] (-1873.801) (-1894.097) * (-1903.289) (-1886.969) (-1889.923) [-1866.674] -- 0:11:34
49000 -- (-1866.914) (-1883.794) (-1893.342) [-1877.943] * (-1878.140) (-1885.774) (-1891.727) [-1879.676] -- 0:11:19
50000 -- (-1878.373) [-1874.784] (-1904.084) (-1892.250) * [-1872.881] (-1879.357) (-1890.134) (-1888.840) -- 0:11:24
Average standard deviation of split frequencies: 0.025407
51000 -- (-1875.289) [-1875.357] (-1890.896) (-1900.096) * [-1875.369] (-1873.609) (-1873.771) (-1906.709) -- 0:11:28
52000 -- (-1862.984) [-1877.857] (-1887.737) (-1888.251) * [-1886.403] (-1874.404) (-1889.786) (-1891.840) -- 0:11:32
53000 -- (-1869.652) [-1872.006] (-1881.334) (-1876.079) * [-1877.745] (-1872.589) (-1883.353) (-1893.250) -- 0:11:18
54000 -- (-1880.842) (-1875.425) [-1881.149] (-1880.774) * (-1874.003) [-1874.799] (-1889.881) (-1875.845) -- 0:11:23
55000 -- [-1863.781] (-1881.614) (-1886.050) (-1887.817) * (-1888.829) (-1882.605) (-1898.910) [-1882.986] -- 0:11:27
Average standard deviation of split frequencies: 0.027816
56000 -- [-1892.820] (-1879.842) (-1887.105) (-1866.709) * [-1878.943] (-1890.946) (-1897.445) (-1887.838) -- 0:11:31
57000 -- (-1883.312) (-1900.725) (-1900.785) [-1868.439] * [-1869.765] (-1887.222) (-1888.948) (-1885.389) -- 0:11:18
58000 -- (-1890.924) (-1892.401) (-1893.107) [-1867.395] * (-1870.064) (-1902.178) (-1900.118) [-1889.863] -- 0:11:22
59000 -- (-1901.329) (-1881.848) (-1885.944) [-1869.924] * [-1873.689] (-1893.354) (-1886.829) (-1891.796) -- 0:11:25
60000 -- (-1908.588) (-1880.468) (-1880.461) [-1875.947] * [-1871.169] (-1887.047) (-1884.206) (-1882.093) -- 0:11:29
Average standard deviation of split frequencies: 0.029392
61000 -- (-1890.564) (-1883.588) (-1872.733) [-1871.780] * (-1877.761) (-1872.793) (-1889.027) [-1872.873] -- 0:11:17
62000 -- (-1877.757) (-1882.470) (-1867.330) [-1866.280] * (-1877.728) (-1895.735) (-1883.163) [-1875.767] -- 0:11:20
63000 -- (-1888.291) (-1884.470) (-1878.487) [-1869.072] * (-1878.517) (-1889.761) (-1879.600) [-1881.428] -- 0:11:24
64000 -- (-1881.964) (-1885.133) [-1872.445] (-1886.736) * (-1887.627) (-1902.111) (-1875.624) [-1875.152] -- 0:11:27
65000 -- [-1872.179] (-1867.489) (-1865.792) (-1881.686) * (-1881.459) (-1886.523) (-1887.515) [-1882.604] -- 0:11:16
Average standard deviation of split frequencies: 0.035415
66000 -- (-1867.099) (-1882.519) [-1860.585] (-1893.767) * [-1881.738] (-1895.052) (-1886.810) (-1877.268) -- 0:11:19
67000 -- (-1882.849) (-1884.514) [-1877.154] (-1872.857) * (-1877.514) (-1880.056) (-1881.777) [-1878.344] -- 0:11:22
68000 -- (-1897.899) (-1888.375) [-1873.939] (-1877.807) * (-1875.362) (-1899.755) (-1880.167) [-1865.651] -- 0:11:25
69000 -- (-1894.797) (-1888.809) [-1865.719] (-1874.901) * (-1873.436) (-1872.036) (-1870.441) [-1871.065] -- 0:11:14
70000 -- [-1880.996] (-1884.401) (-1867.082) (-1885.257) * [-1862.680] (-1905.364) (-1889.318) (-1872.678) -- 0:11:17
Average standard deviation of split frequencies: 0.036556
71000 -- (-1885.000) (-1883.058) (-1864.130) [-1868.907] * [-1874.772] (-1874.198) (-1886.544) (-1888.385) -- 0:11:20
72000 -- (-1897.047) (-1877.378) [-1874.016] (-1866.800) * [-1875.169] (-1874.656) (-1895.397) (-1876.452) -- 0:11:23
73000 -- (-1906.096) (-1880.370) (-1881.524) [-1871.590] * (-1878.428) (-1876.254) (-1891.062) [-1867.195] -- 0:11:13
74000 -- (-1889.019) [-1889.467] (-1876.038) (-1881.633) * (-1881.854) (-1886.153) (-1892.296) [-1864.644] -- 0:11:15
75000 -- (-1896.228) (-1877.234) (-1888.145) [-1865.572] * [-1878.256] (-1880.211) (-1890.747) (-1868.030) -- 0:11:18
Average standard deviation of split frequencies: 0.040938
76000 -- (-1877.061) (-1872.338) (-1879.338) [-1867.358] * (-1876.962) [-1873.370] (-1876.790) (-1879.219) -- 0:11:20
77000 -- (-1883.582) (-1873.310) [-1875.625] (-1881.656) * (-1872.857) (-1877.613) (-1880.256) [-1881.592] -- 0:11:11
78000 -- (-1873.849) (-1886.503) (-1879.785) [-1869.751] * [-1861.243] (-1881.405) (-1903.573) (-1883.206) -- 0:11:13
79000 -- (-1877.787) (-1884.273) (-1877.295) [-1886.403] * [-1869.158] (-1881.302) (-1889.983) (-1881.033) -- 0:11:16
80000 -- (-1884.777) (-1871.461) [-1876.571] (-1879.622) * [-1876.259] (-1887.213) (-1881.401) (-1886.773) -- 0:11:07
Average standard deviation of split frequencies: 0.038102
81000 -- (-1887.699) (-1887.446) [-1870.006] (-1875.929) * (-1874.582) (-1895.090) [-1855.022] (-1891.335) -- 0:11:09
82000 -- (-1882.065) (-1882.449) (-1884.183) [-1884.937] * [-1868.962] (-1884.579) (-1866.205) (-1886.342) -- 0:11:00
83000 -- [-1877.885] (-1897.829) (-1895.195) (-1881.622) * (-1879.236) (-1880.403) [-1874.137] (-1886.033) -- 0:11:02
84000 -- (-1880.330) [-1879.568] (-1911.184) (-1875.410) * (-1890.063) (-1880.171) [-1856.379] (-1881.491) -- 0:10:54
85000 -- (-1878.510) [-1873.277] (-1890.981) (-1892.734) * (-1869.854) (-1882.731) [-1867.503] (-1896.821) -- 0:10:56
Average standard deviation of split frequencies: 0.031573
86000 -- (-1881.957) (-1883.254) (-1873.421) [-1888.907] * (-1885.259) (-1907.437) [-1878.569] (-1873.100) -- 0:10:48
87000 -- (-1865.012) [-1880.466] (-1873.233) (-1893.752) * (-1879.128) [-1889.909] (-1880.095) (-1887.680) -- 0:10:50
88000 -- (-1876.391) (-1885.250) (-1873.040) [-1878.218] * (-1881.463) (-1882.324) (-1884.571) [-1875.252] -- 0:10:42
89000 -- (-1870.430) (-1884.323) (-1879.296) [-1862.861] * (-1886.446) [-1876.209] (-1891.094) (-1863.361) -- 0:10:44
90000 -- (-1871.304) (-1893.241) (-1882.278) [-1875.047] * [-1868.647] (-1884.534) (-1881.924) (-1882.797) -- 0:10:47
Average standard deviation of split frequencies: 0.030364
91000 -- [-1866.113] (-1895.779) (-1886.679) (-1877.242) * (-1879.555) [-1877.217] (-1873.849) (-1883.074) -- 0:10:49
92000 -- (-1866.012) (-1880.749) [-1873.702] (-1888.408) * [-1864.541] (-1883.716) (-1880.177) (-1880.513) -- 0:10:41
93000 -- (-1871.168) (-1897.431) (-1890.295) [-1860.485] * [-1862.574] (-1880.010) (-1899.479) (-1879.511) -- 0:10:43
94000 -- (-1871.923) (-1892.272) (-1877.907) [-1869.247] * (-1876.499) [-1866.882] (-1887.145) (-1904.909) -- 0:10:45
95000 -- (-1877.266) (-1878.431) (-1893.793) [-1879.304] * (-1870.022) [-1875.979] (-1875.067) (-1898.094) -- 0:10:38
Average standard deviation of split frequencies: 0.030486
96000 -- (-1883.291) [-1878.623] (-1890.619) (-1870.040) * (-1865.420) (-1875.613) [-1865.691] (-1898.816) -- 0:10:40
97000 -- (-1872.712) [-1871.717] (-1882.047) (-1891.442) * (-1876.156) (-1883.464) (-1867.079) [-1892.838] -- 0:10:42
98000 -- [-1874.986] (-1888.416) (-1886.121) (-1879.565) * (-1895.192) [-1867.966] (-1866.900) (-1881.671) -- 0:10:35
99000 -- (-1889.302) (-1893.418) (-1888.795) [-1872.316] * (-1900.391) (-1886.176) (-1868.881) [-1880.133] -- 0:10:37
100000 -- (-1886.153) (-1884.911) [-1881.331] (-1886.861) * (-1894.558) (-1878.320) [-1871.159] (-1897.232) -- 0:10:39
Average standard deviation of split frequencies: 0.031094
101000 -- (-1874.989) (-1873.964) [-1867.189] (-1873.639) * (-1878.269) (-1886.840) (-1871.965) [-1880.563] -- 0:10:40
102000 -- [-1872.569] (-1874.056) (-1891.450) (-1886.593) * (-1875.902) (-1882.984) (-1880.104) [-1864.695] -- 0:10:33
103000 -- [-1873.068] (-1877.297) (-1876.462) (-1887.536) * (-1872.219) (-1878.685) (-1880.942) [-1875.103] -- 0:10:35
104000 -- (-1880.927) (-1878.631) (-1881.805) [-1872.947] * [-1874.773] (-1879.085) (-1873.438) (-1892.897) -- 0:10:37
105000 -- (-1875.313) (-1883.583) [-1860.638] (-1885.976) * (-1876.177) [-1873.174] (-1882.967) (-1879.644) -- 0:10:39
Average standard deviation of split frequencies: 0.035578
106000 -- [-1872.849] (-1871.864) (-1876.447) (-1890.237) * (-1878.982) [-1885.205] (-1880.119) (-1887.711) -- 0:10:32
107000 -- (-1885.219) (-1887.670) (-1864.729) [-1880.718] * [-1858.586] (-1895.131) (-1877.636) (-1887.218) -- 0:10:34
108000 -- (-1882.500) (-1878.698) (-1886.488) [-1870.145] * [-1876.692] (-1885.767) (-1889.267) (-1872.686) -- 0:10:35
109000 -- (-1897.740) (-1875.829) [-1885.425] (-1892.688) * (-1886.396) (-1878.419) (-1895.393) [-1874.356] -- 0:10:37
110000 -- [-1858.725] (-1897.477) (-1878.067) (-1887.347) * (-1876.561) [-1870.432] (-1889.071) (-1878.364) -- 0:10:31
Average standard deviation of split frequencies: 0.035142
111000 -- (-1880.871) (-1882.756) [-1867.407] (-1896.786) * (-1881.378) [-1875.938] (-1886.337) (-1896.627) -- 0:10:32
112000 -- (-1896.548) (-1873.771) [-1876.453] (-1883.271) * [-1873.030] (-1883.198) (-1885.341) (-1890.070) -- 0:10:34
113000 -- (-1896.761) [-1880.274] (-1891.217) (-1891.563) * [-1875.273] (-1903.490) (-1879.790) (-1894.340) -- 0:10:35
114000 -- (-1892.222) [-1867.682] (-1872.711) (-1906.693) * (-1881.734) (-1892.360) [-1879.915] (-1883.316) -- 0:10:37
115000 -- (-1884.424) (-1863.921) [-1867.560] (-1902.574) * (-1874.910) (-1887.996) [-1876.770] (-1902.018) -- 0:10:31
Average standard deviation of split frequencies: 0.033486
116000 -- (-1880.415) [-1863.311] (-1876.568) (-1872.886) * (-1880.903) (-1885.768) [-1875.153] (-1878.566) -- 0:10:32
117000 -- (-1892.421) [-1860.028] (-1876.218) (-1880.327) * (-1893.470) (-1872.729) [-1877.323] (-1885.989) -- 0:10:33
118000 -- (-1863.822) (-1886.087) [-1871.639] (-1885.900) * (-1896.200) [-1873.994] (-1873.262) (-1878.334) -- 0:10:27
119000 -- (-1877.453) (-1890.865) [-1866.787] (-1881.915) * (-1889.215) (-1876.483) (-1879.526) [-1874.607] -- 0:10:29
120000 -- [-1872.029] (-1863.375) (-1885.870) (-1872.684) * [-1884.239] (-1877.540) (-1875.465) (-1897.521) -- 0:10:30
Average standard deviation of split frequencies: 0.033910
121000 -- (-1882.162) [-1876.532] (-1879.657) (-1878.045) * (-1899.854) [-1878.283] (-1866.160) (-1887.380) -- 0:10:32
122000 -- [-1874.097] (-1889.205) (-1875.720) (-1874.625) * [-1875.707] (-1883.547) (-1877.539) (-1904.744) -- 0:10:26
123000 -- (-1882.184) (-1886.745) (-1874.425) [-1867.466] * [-1872.959] (-1889.206) (-1875.829) (-1895.133) -- 0:10:27
124000 -- (-1873.388) [-1879.236] (-1884.448) (-1893.599) * [-1870.978] (-1892.117) (-1879.860) (-1869.936) -- 0:10:28
125000 -- [-1879.007] (-1898.617) (-1876.615) (-1879.247) * [-1869.960] (-1884.345) (-1875.835) (-1898.812) -- 0:10:23
Average standard deviation of split frequencies: 0.036066
126000 -- [-1888.304] (-1885.335) (-1884.342) (-1884.809) * [-1881.576] (-1877.756) (-1873.602) (-1897.731) -- 0:10:24
127000 -- (-1889.297) (-1880.124) [-1868.479] (-1877.609) * (-1875.739) (-1884.464) [-1879.225] (-1896.524) -- 0:10:25
128000 -- (-1867.874) (-1887.347) (-1883.815) [-1886.941] * (-1871.963) [-1880.701] (-1871.281) (-1884.228) -- 0:10:26
129000 -- (-1875.578) (-1874.626) [-1877.126] (-1892.587) * [-1877.635] (-1882.726) (-1872.565) (-1905.485) -- 0:10:21
130000 -- (-1888.385) (-1883.814) [-1878.141] (-1884.547) * [-1863.595] (-1902.298) (-1876.553) (-1875.149) -- 0:10:22
Average standard deviation of split frequencies: 0.033335
131000 -- (-1902.136) (-1869.461) [-1871.780] (-1890.160) * [-1876.990] (-1888.748) (-1877.796) (-1879.761) -- 0:10:23
132000 -- (-1877.044) [-1859.389] (-1878.647) (-1881.709) * (-1879.280) (-1911.226) [-1878.384] (-1884.349) -- 0:10:24
133000 -- (-1884.788) (-1871.939) [-1868.971] (-1892.211) * (-1863.658) (-1885.649) [-1872.866] (-1890.663) -- 0:10:19
134000 -- (-1897.652) (-1868.890) [-1866.776] (-1888.108) * [-1866.148] (-1884.394) (-1874.055) (-1891.977) -- 0:10:20
135000 -- (-1884.961) (-1871.682) (-1878.560) [-1871.944] * (-1886.188) (-1886.533) [-1876.454] (-1887.873) -- 0:10:21
Average standard deviation of split frequencies: 0.030087
136000 -- (-1879.001) (-1876.564) [-1876.609] (-1885.118) * (-1876.488) (-1882.528) [-1870.687] (-1884.098) -- 0:10:22
137000 -- (-1881.486) (-1882.858) (-1876.683) [-1874.827] * (-1883.973) (-1873.059) [-1867.869] (-1889.770) -- 0:10:17
138000 -- [-1862.213] (-1876.146) (-1874.324) (-1880.721) * (-1894.515) (-1881.137) [-1867.996] (-1897.478) -- 0:10:18
139000 -- (-1878.235) (-1880.565) (-1903.888) [-1866.474] * (-1881.036) [-1867.959] (-1884.248) (-1886.838) -- 0:10:19
140000 -- (-1882.949) (-1887.625) (-1885.456) [-1879.637] * [-1874.162] (-1879.244) (-1882.903) (-1882.431) -- 0:10:20
Average standard deviation of split frequencies: 0.028625
141000 -- [-1870.369] (-1893.082) (-1891.085) (-1872.821) * (-1881.435) (-1885.365) [-1870.938] (-1877.086) -- 0:10:15
142000 -- (-1884.190) (-1894.091) [-1865.456] (-1893.603) * (-1889.685) (-1881.287) [-1872.137] (-1880.409) -- 0:10:16
143000 -- (-1883.000) (-1899.003) [-1861.475] (-1894.291) * (-1890.645) (-1893.910) (-1878.111) [-1881.001] -- 0:10:17
144000 -- (-1880.051) (-1897.494) (-1879.692) [-1871.545] * (-1881.313) (-1890.465) [-1869.322] (-1873.258) -- 0:10:18
145000 -- (-1881.828) (-1896.439) (-1879.100) [-1872.591] * (-1888.578) (-1884.451) [-1868.027] (-1881.619) -- 0:10:13
Average standard deviation of split frequencies: 0.027321
146000 -- (-1872.108) (-1893.890) (-1877.181) [-1867.442] * (-1872.990) (-1864.210) [-1873.819] (-1877.969) -- 0:10:14
147000 -- (-1879.709) [-1873.165] (-1866.577) (-1883.790) * (-1878.327) (-1872.876) [-1866.836] (-1870.560) -- 0:10:15
148000 -- [-1863.943] (-1884.565) (-1877.207) (-1904.995) * (-1880.676) (-1886.988) (-1874.815) [-1870.216] -- 0:10:15
149000 -- (-1876.650) (-1857.128) (-1899.331) [-1882.437] * (-1886.653) (-1885.981) [-1878.710] (-1875.604) -- 0:10:16
150000 -- (-1877.389) [-1871.671] (-1892.802) (-1887.194) * (-1866.633) (-1883.506) (-1879.630) [-1873.559] -- 0:10:12
Average standard deviation of split frequencies: 0.026715
151000 -- (-1877.810) [-1871.420] (-1884.758) (-1889.745) * (-1873.887) (-1903.352) (-1886.045) [-1858.917] -- 0:10:12
152000 -- (-1874.105) (-1870.086) [-1866.825] (-1880.302) * (-1883.431) (-1886.658) (-1879.787) [-1869.886] -- 0:10:08
153000 -- (-1878.846) (-1876.802) [-1869.886] (-1879.272) * (-1868.531) (-1892.056) (-1872.369) [-1873.447] -- 0:10:08
154000 -- (-1888.233) [-1887.763] (-1881.725) (-1889.232) * (-1870.084) (-1887.360) (-1881.952) [-1871.688] -- 0:10:09
155000 -- [-1875.501] (-1884.010) (-1876.353) (-1877.139) * (-1875.771) [-1875.786] (-1902.417) (-1877.076) -- 0:10:05
Average standard deviation of split frequencies: 0.024407
156000 -- (-1875.858) [-1874.257] (-1875.549) (-1874.276) * (-1872.645) (-1862.354) (-1880.957) [-1874.287] -- 0:10:05
157000 -- [-1869.874] (-1867.715) (-1882.821) (-1874.640) * (-1879.185) [-1865.955] (-1882.928) (-1876.208) -- 0:10:01
158000 -- (-1870.179) [-1871.004] (-1903.845) (-1890.566) * (-1869.163) [-1870.231] (-1883.479) (-1878.964) -- 0:10:02
159000 -- (-1872.181) [-1881.624] (-1876.580) (-1906.445) * (-1867.038) (-1877.641) [-1883.553] (-1883.740) -- 0:09:57
160000 -- (-1878.882) (-1884.925) (-1882.263) [-1887.411] * (-1889.574) (-1886.655) [-1867.807] (-1888.733) -- 0:09:58
Average standard deviation of split frequencies: 0.024294
161000 -- (-1895.749) (-1882.012) [-1881.240] (-1872.418) * (-1887.386) [-1870.971] (-1874.978) (-1882.319) -- 0:09:59
162000 -- (-1896.617) (-1880.794) [-1873.298] (-1876.794) * [-1870.306] (-1877.690) (-1884.547) (-1879.323) -- 0:09:54
163000 -- (-1885.907) [-1885.660] (-1869.582) (-1878.423) * (-1881.625) [-1872.274] (-1881.089) (-1887.537) -- 0:09:55
164000 -- (-1878.742) (-1899.519) (-1870.157) [-1868.301] * [-1878.913] (-1874.705) (-1873.288) (-1895.711) -- 0:09:56
165000 -- (-1883.490) (-1899.227) [-1884.866] (-1868.368) * [-1867.210] (-1875.303) (-1876.585) (-1879.144) -- 0:09:57
Average standard deviation of split frequencies: 0.023059
166000 -- [-1874.978] (-1897.838) (-1888.555) (-1865.179) * [-1868.753] (-1881.937) (-1887.249) (-1901.675) -- 0:09:52
167000 -- [-1885.231] (-1898.849) (-1886.449) (-1882.017) * (-1868.075) [-1878.078] (-1888.557) (-1905.081) -- 0:09:53
168000 -- (-1879.950) (-1890.119) [-1889.431] (-1873.826) * (-1875.477) [-1873.692] (-1878.019) (-1893.601) -- 0:09:54
169000 -- (-1894.577) (-1914.696) (-1875.055) [-1862.730] * (-1880.967) (-1879.504) (-1881.224) [-1878.861] -- 0:09:50
170000 -- (-1903.197) (-1885.178) (-1886.938) [-1859.561] * (-1890.535) (-1891.552) (-1877.443) [-1870.284] -- 0:09:50
Average standard deviation of split frequencies: 0.022870
171000 -- (-1893.165) (-1882.987) (-1895.984) [-1864.109] * (-1893.386) [-1874.604] (-1869.503) (-1897.890) -- 0:09:46
172000 -- (-1887.258) (-1872.466) [-1870.421] (-1887.839) * (-1876.419) [-1875.479] (-1883.478) (-1889.637) -- 0:09:47
173000 -- [-1875.263] (-1875.910) (-1875.283) (-1880.798) * (-1877.000) [-1864.569] (-1868.576) (-1899.033) -- 0:09:43
174000 -- (-1868.878) (-1869.077) [-1883.431] (-1866.320) * [-1874.429] (-1868.438) (-1876.618) (-1882.590) -- 0:09:43
175000 -- [-1877.542] (-1880.482) (-1882.782) (-1869.450) * [-1878.652] (-1875.429) (-1882.574) (-1886.919) -- 0:09:39
Average standard deviation of split frequencies: 0.022320
176000 -- [-1865.651] (-1869.701) (-1872.538) (-1869.191) * (-1891.282) [-1864.908] (-1891.847) (-1885.894) -- 0:09:40
177000 -- (-1872.594) (-1867.323) [-1863.642] (-1894.000) * (-1885.058) [-1867.661] (-1871.926) (-1885.934) -- 0:09:41
178000 -- (-1880.893) [-1872.147] (-1877.209) (-1873.747) * (-1876.894) (-1868.726) [-1868.043] (-1902.881) -- 0:09:37
179000 -- (-1883.582) [-1869.058] (-1893.113) (-1889.593) * (-1875.198) [-1865.348] (-1876.074) (-1879.449) -- 0:09:37
180000 -- [-1869.878] (-1881.013) (-1888.004) (-1880.205) * (-1883.375) (-1878.586) [-1867.616] (-1865.378) -- 0:09:38
Average standard deviation of split frequencies: 0.023266
181000 -- (-1891.061) (-1880.257) (-1901.695) [-1874.950] * (-1896.276) (-1879.423) (-1868.775) [-1866.296] -- 0:09:39
182000 -- (-1885.770) [-1873.893] (-1907.360) (-1879.832) * (-1880.235) [-1878.691] (-1888.220) (-1872.814) -- 0:09:35
183000 -- (-1887.577) (-1881.934) (-1893.648) [-1871.409] * (-1876.160) (-1867.630) (-1891.076) [-1863.153] -- 0:09:35
184000 -- [-1866.404] (-1890.820) (-1897.336) (-1878.904) * (-1882.013) (-1899.447) (-1878.670) [-1863.612] -- 0:09:32
185000 -- [-1879.985] (-1882.538) (-1888.811) (-1885.812) * (-1873.584) (-1889.389) [-1882.163] (-1888.567) -- 0:09:32
Average standard deviation of split frequencies: 0.019983
186000 -- [-1874.120] (-1876.018) (-1888.734) (-1881.831) * (-1867.000) (-1875.741) (-1882.225) [-1871.859] -- 0:09:33
187000 -- [-1875.029] (-1881.299) (-1883.440) (-1876.396) * [-1880.620] (-1878.571) (-1871.887) (-1873.694) -- 0:09:29
188000 -- (-1885.630) (-1889.961) [-1871.747] (-1883.190) * (-1870.166) [-1871.654] (-1894.762) (-1890.385) -- 0:09:30
189000 -- (-1886.727) (-1885.482) (-1884.836) [-1870.440] * (-1875.151) [-1862.942] (-1890.233) (-1885.898) -- 0:09:30
190000 -- (-1875.967) [-1878.205] (-1875.030) (-1910.261) * (-1881.055) (-1881.827) (-1908.602) [-1881.531] -- 0:09:31
Average standard deviation of split frequencies: 0.018448
191000 -- (-1875.221) (-1866.815) [-1870.180] (-1884.849) * [-1872.418] (-1888.098) (-1896.878) (-1867.355) -- 0:09:27
192000 -- (-1867.651) (-1871.018) [-1877.574] (-1878.833) * (-1877.401) (-1876.961) (-1896.476) [-1867.352] -- 0:09:28
193000 -- (-1876.265) (-1891.595) [-1883.340] (-1877.904) * [-1866.935] (-1897.482) (-1880.414) (-1884.435) -- 0:09:28
194000 -- [-1867.062] (-1880.296) (-1872.791) (-1894.527) * [-1872.070] (-1893.765) (-1886.756) (-1888.121) -- 0:09:29
195000 -- [-1890.917] (-1872.290) (-1900.602) (-1876.307) * [-1865.218] (-1878.403) (-1887.688) (-1895.299) -- 0:09:29
Average standard deviation of split frequencies: 0.017237
196000 -- [-1879.474] (-1873.953) (-1911.200) (-1876.245) * [-1864.606] (-1878.891) (-1917.544) (-1888.514) -- 0:09:26
197000 -- [-1861.617] (-1880.587) (-1900.306) (-1875.490) * [-1862.034] (-1869.785) (-1921.768) (-1872.578) -- 0:09:26
198000 -- (-1878.712) [-1867.689] (-1901.356) (-1892.595) * (-1885.881) (-1874.212) (-1889.036) [-1877.621] -- 0:09:27
199000 -- (-1873.451) [-1862.305] (-1890.973) (-1896.935) * [-1875.583] (-1877.075) (-1880.493) (-1892.821) -- 0:09:27
200000 -- (-1865.773) [-1869.363] (-1893.741) (-1890.822) * (-1888.896) (-1897.606) [-1878.052] (-1870.169) -- 0:09:24
Average standard deviation of split frequencies: 0.016350
201000 -- (-1872.512) [-1877.765] (-1883.571) (-1883.761) * (-1874.306) (-1888.975) (-1887.954) [-1874.138] -- 0:09:24
202000 -- (-1873.428) (-1870.057) [-1882.457] (-1881.266) * (-1881.284) (-1897.576) [-1866.826] (-1874.210) -- 0:09:24
203000 -- [-1870.480] (-1884.472) (-1876.688) (-1872.688) * (-1883.080) (-1887.019) [-1859.972] (-1867.366) -- 0:09:21
204000 -- (-1888.013) (-1899.883) [-1874.270] (-1876.623) * (-1888.311) (-1895.300) (-1862.896) [-1883.719] -- 0:09:21
205000 -- (-1884.208) (-1883.919) (-1871.438) [-1878.222] * (-1885.993) (-1899.489) [-1880.116] (-1880.943) -- 0:09:22
Average standard deviation of split frequencies: 0.015378
206000 -- [-1878.075] (-1911.372) (-1873.221) (-1873.047) * (-1860.596) (-1895.108) (-1875.159) [-1868.671] -- 0:09:22
207000 -- [-1879.134] (-1905.364) (-1889.410) (-1892.158) * (-1869.500) (-1881.294) [-1864.418] (-1872.863) -- 0:09:19
208000 -- [-1872.851] (-1890.482) (-1880.906) (-1872.322) * (-1871.123) (-1868.042) (-1867.132) [-1873.742] -- 0:09:19
209000 -- (-1885.223) (-1890.063) (-1883.825) [-1873.087] * (-1881.850) (-1873.112) (-1872.818) [-1878.755] -- 0:09:16
210000 -- (-1886.926) [-1887.918] (-1865.685) (-1884.602) * (-1884.024) (-1874.856) [-1873.321] (-1882.056) -- 0:09:16
Average standard deviation of split frequencies: 0.015753
211000 -- (-1884.379) (-1880.077) [-1868.637] (-1907.876) * (-1875.156) (-1874.142) [-1868.736] (-1874.419) -- 0:09:17
212000 -- (-1878.340) [-1866.531] (-1862.315) (-1893.038) * (-1893.919) [-1868.036] (-1879.443) (-1871.410) -- 0:09:17
213000 -- (-1881.395) (-1885.087) [-1868.365] (-1881.735) * (-1894.384) (-1869.517) (-1864.495) [-1882.652] -- 0:09:14
214000 -- (-1883.094) (-1875.522) [-1873.493] (-1888.239) * (-1887.449) (-1885.543) (-1880.014) [-1881.919] -- 0:09:14
215000 -- (-1877.499) (-1873.787) [-1872.311] (-1898.901) * (-1884.088) (-1886.740) [-1862.063] (-1887.049) -- 0:09:14
Average standard deviation of split frequencies: 0.015102
216000 -- (-1874.963) (-1888.148) [-1862.174] (-1893.150) * (-1885.812) [-1868.128] (-1882.429) (-1874.295) -- 0:09:15
217000 -- (-1866.859) (-1901.362) [-1876.651] (-1892.275) * (-1897.894) (-1895.112) (-1884.982) [-1871.491] -- 0:09:12
218000 -- (-1882.342) (-1883.169) [-1878.771] (-1909.312) * (-1885.470) [-1893.945] (-1872.546) (-1891.648) -- 0:09:12
219000 -- [-1870.577] (-1882.060) (-1874.981) (-1879.756) * (-1881.224) (-1892.099) [-1874.686] (-1882.596) -- 0:09:12
220000 -- [-1867.968] (-1888.148) (-1886.759) (-1870.034) * [-1870.155] (-1880.908) (-1881.579) (-1896.888) -- 0:09:09
Average standard deviation of split frequencies: 0.015552
221000 -- [-1872.435] (-1875.725) (-1890.075) (-1884.923) * (-1883.739) (-1891.952) (-1896.709) [-1881.344] -- 0:09:09
222000 -- [-1869.743] (-1892.727) (-1886.580) (-1889.140) * (-1878.706) [-1868.988] (-1893.515) (-1862.251) -- 0:09:10
223000 -- [-1875.158] (-1877.989) (-1889.058) (-1907.493) * [-1874.454] (-1886.379) (-1886.526) (-1869.414) -- 0:09:10
224000 -- (-1888.141) [-1879.333] (-1909.012) (-1879.531) * [-1889.624] (-1908.132) (-1875.097) (-1875.842) -- 0:09:10
225000 -- (-1886.799) (-1882.569) [-1882.343] (-1885.870) * (-1883.801) (-1885.277) [-1874.107] (-1889.765) -- 0:09:07
Average standard deviation of split frequencies: 0.014768
226000 -- (-1881.053) [-1883.518] (-1875.540) (-1885.424) * (-1863.175) [-1875.608] (-1885.607) (-1890.978) -- 0:09:07
227000 -- (-1888.585) [-1885.027] (-1894.904) (-1882.059) * (-1871.665) [-1864.544] (-1884.728) (-1894.089) -- 0:09:08
228000 -- (-1886.355) [-1886.293] (-1890.852) (-1889.464) * [-1874.993] (-1878.464) (-1896.684) (-1876.021) -- 0:09:08
229000 -- (-1874.469) [-1875.060] (-1895.290) (-1885.694) * [-1872.218] (-1894.578) (-1873.504) (-1877.679) -- 0:09:05
230000 -- (-1888.314) (-1875.101) (-1879.264) [-1877.538] * [-1870.697] (-1887.417) (-1884.622) (-1897.537) -- 0:09:05
Average standard deviation of split frequencies: 0.014633
231000 -- (-1876.817) (-1872.106) [-1881.195] (-1885.437) * (-1865.001) (-1902.434) [-1874.278] (-1884.864) -- 0:09:05
232000 -- (-1872.286) [-1867.166] (-1891.937) (-1895.509) * (-1882.341) (-1876.291) [-1863.332] (-1891.884) -- 0:09:06
233000 -- [-1868.208] (-1863.536) (-1881.158) (-1898.769) * (-1872.214) (-1876.427) [-1867.961] (-1888.788) -- 0:09:03
234000 -- (-1893.362) (-1878.529) (-1883.123) [-1879.804] * (-1881.667) (-1875.136) [-1864.051] (-1895.627) -- 0:09:03
235000 -- (-1901.781) (-1869.659) [-1854.641] (-1881.773) * [-1879.046] (-1893.689) (-1881.420) (-1877.066) -- 0:09:00
Average standard deviation of split frequencies: 0.013902
236000 -- (-1878.271) [-1868.689] (-1886.225) (-1894.914) * [-1874.959] (-1894.578) (-1879.831) (-1892.302) -- 0:09:00
237000 -- [-1873.363] (-1868.419) (-1907.814) (-1882.807) * (-1879.403) (-1882.257) [-1877.227] (-1868.756) -- 0:08:57
238000 -- (-1878.807) [-1866.934] (-1909.126) (-1885.840) * (-1868.264) [-1868.188] (-1875.358) (-1881.037) -- 0:08:57
239000 -- (-1872.977) [-1868.419] (-1901.668) (-1881.533) * (-1873.309) (-1868.658) [-1881.807] (-1889.645) -- 0:08:54
240000 -- (-1880.365) [-1866.503] (-1893.482) (-1872.048) * (-1891.703) (-1866.764) (-1878.385) [-1879.866] -- 0:08:55
Average standard deviation of split frequencies: 0.012650
241000 -- (-1899.988) [-1881.527] (-1896.454) (-1878.880) * (-1883.656) (-1874.647) (-1886.480) [-1875.063] -- 0:08:52
242000 -- (-1890.378) (-1885.816) (-1881.565) [-1872.827] * (-1886.285) (-1875.535) (-1900.363) [-1879.288] -- 0:08:52
243000 -- (-1885.451) (-1887.043) [-1870.190] (-1862.835) * (-1904.636) [-1870.745] (-1893.302) (-1872.645) -- 0:08:52
244000 -- [-1869.181] (-1881.188) (-1894.884) (-1874.482) * (-1901.141) [-1872.461] (-1891.236) (-1883.807) -- 0:08:49
245000 -- [-1874.463] (-1895.733) (-1891.742) (-1891.145) * (-1901.416) [-1879.726] (-1880.488) (-1878.469) -- 0:08:50
Average standard deviation of split frequencies: 0.013015
246000 -- (-1877.917) (-1885.654) [-1866.795] (-1885.495) * (-1898.241) [-1878.127] (-1877.417) (-1886.337) -- 0:08:50
247000 -- (-1896.578) (-1879.839) [-1871.707] (-1905.780) * (-1910.122) (-1877.377) (-1877.168) [-1872.573] -- 0:08:47
248000 -- (-1878.892) (-1884.558) [-1878.456] (-1907.610) * (-1893.895) (-1873.864) [-1867.047] (-1888.678) -- 0:08:47
249000 -- [-1870.432] (-1877.634) (-1879.795) (-1901.039) * (-1885.542) [-1867.311] (-1873.383) (-1886.926) -- 0:08:47
250000 -- (-1871.618) [-1880.802] (-1881.192) (-1915.196) * [-1870.452] (-1867.125) (-1881.460) (-1880.996) -- 0:08:45
Average standard deviation of split frequencies: 0.012513
251000 -- (-1866.409) [-1883.466] (-1883.311) (-1904.534) * (-1884.501) [-1879.050] (-1879.072) (-1897.658) -- 0:08:45
252000 -- [-1863.908] (-1892.738) (-1880.374) (-1884.084) * [-1881.742] (-1894.527) (-1874.241) (-1884.742) -- 0:08:45
253000 -- (-1877.463) (-1882.124) [-1874.189] (-1893.114) * (-1882.682) [-1870.024] (-1879.869) (-1878.473) -- 0:08:42
254000 -- (-1880.684) (-1884.654) [-1882.579] (-1891.075) * (-1890.751) [-1885.348] (-1871.159) (-1886.584) -- 0:08:42
255000 -- [-1873.879] (-1885.681) (-1866.831) (-1883.413) * [-1885.555] (-1897.634) (-1905.959) (-1884.765) -- 0:08:42
Average standard deviation of split frequencies: 0.013244
256000 -- (-1861.933) (-1886.093) (-1888.792) [-1876.416] * (-1876.864) (-1900.944) (-1904.836) [-1877.741] -- 0:08:43
257000 -- (-1877.504) [-1873.680] (-1890.972) (-1876.628) * (-1875.268) (-1904.330) (-1897.262) [-1872.123] -- 0:08:40
258000 -- (-1880.220) (-1873.778) [-1874.502] (-1904.270) * [-1881.501] (-1890.660) (-1885.559) (-1876.834) -- 0:08:40
259000 -- (-1879.651) (-1867.418) [-1879.754] (-1895.310) * (-1878.524) (-1867.196) (-1896.690) [-1873.480] -- 0:08:40
260000 -- [-1872.660] (-1893.339) (-1884.562) (-1891.182) * (-1885.708) [-1872.647] (-1907.300) (-1868.747) -- 0:08:40
Average standard deviation of split frequencies: 0.011863
261000 -- (-1876.808) [-1867.806] (-1884.209) (-1895.502) * (-1876.131) [-1870.368] (-1894.652) (-1890.971) -- 0:08:38
262000 -- (-1878.913) [-1863.364] (-1879.095) (-1902.019) * [-1864.048] (-1874.507) (-1881.693) (-1901.016) -- 0:08:38
263000 -- (-1894.308) [-1859.490] (-1889.654) (-1874.017) * (-1877.034) [-1867.496] (-1885.890) (-1885.589) -- 0:08:38
264000 -- (-1890.424) [-1875.786] (-1883.380) (-1872.278) * [-1871.464] (-1880.872) (-1879.891) (-1876.005) -- 0:08:38
265000 -- (-1888.297) (-1882.674) [-1883.026] (-1882.490) * [-1870.037] (-1900.311) (-1891.214) (-1893.837) -- 0:08:35
Average standard deviation of split frequencies: 0.011587
266000 -- (-1884.133) [-1882.522] (-1873.030) (-1879.459) * (-1888.788) (-1880.301) [-1878.447] (-1879.862) -- 0:08:36
267000 -- (-1879.541) [-1876.728] (-1880.832) (-1875.965) * (-1888.958) (-1867.145) (-1870.529) [-1864.866] -- 0:08:36
268000 -- [-1872.345] (-1863.219) (-1891.096) (-1874.404) * (-1871.211) (-1897.253) (-1881.659) [-1883.338] -- 0:08:36
269000 -- (-1882.165) (-1880.907) (-1911.096) [-1865.584] * (-1892.530) (-1889.905) [-1874.926] (-1887.379) -- 0:08:33
270000 -- (-1883.459) (-1877.664) (-1896.380) [-1880.952] * (-1875.370) (-1885.609) (-1885.750) [-1879.427] -- 0:08:33
Average standard deviation of split frequencies: 0.011053
271000 -- (-1880.487) (-1875.753) (-1880.542) [-1878.836] * (-1893.182) [-1876.199] (-1874.337) (-1884.507) -- 0:08:33
272000 -- (-1877.423) (-1882.702) [-1871.626] (-1888.223) * [-1865.353] (-1879.176) (-1871.889) (-1891.882) -- 0:08:33
273000 -- (-1879.719) (-1875.982) [-1879.271] (-1891.788) * [-1874.367] (-1882.144) (-1874.920) (-1891.281) -- 0:08:31
274000 -- (-1912.187) (-1869.327) [-1875.162] (-1899.420) * (-1872.456) (-1871.890) (-1894.279) [-1878.962] -- 0:08:31
275000 -- (-1905.118) [-1873.442] (-1871.006) (-1892.682) * (-1882.652) [-1863.943] (-1879.247) (-1899.004) -- 0:08:28
Average standard deviation of split frequencies: 0.011233
276000 -- (-1884.350) [-1879.187] (-1898.823) (-1891.982) * (-1868.807) [-1874.440] (-1884.840) (-1892.492) -- 0:08:28
277000 -- (-1877.299) (-1884.164) (-1883.730) [-1872.577] * (-1873.655) [-1869.984] (-1878.215) (-1880.769) -- 0:08:28
278000 -- (-1867.826) [-1870.837] (-1900.606) (-1877.120) * (-1887.549) [-1872.991] (-1875.661) (-1885.161) -- 0:08:29
279000 -- (-1874.505) [-1885.126] (-1893.550) (-1888.472) * (-1882.276) (-1881.239) (-1884.639) [-1872.050] -- 0:08:29
280000 -- (-1874.029) [-1879.967] (-1883.055) (-1883.572) * (-1874.598) [-1864.835] (-1877.449) (-1881.441) -- 0:08:26
Average standard deviation of split frequencies: 0.011757
281000 -- [-1873.003] (-1874.742) (-1895.918) (-1877.118) * (-1875.305) (-1867.612) (-1880.358) [-1869.223] -- 0:08:26
282000 -- (-1882.968) (-1872.439) (-1870.481) [-1866.388] * [-1861.187] (-1872.982) (-1900.745) (-1874.123) -- 0:08:26
283000 -- (-1869.886) [-1876.870] (-1897.906) (-1871.979) * (-1885.027) (-1883.535) (-1906.833) [-1883.134] -- 0:08:26
284000 -- [-1872.113] (-1899.283) (-1900.306) (-1879.371) * [-1871.053] (-1877.754) (-1898.698) (-1878.441) -- 0:08:24
285000 -- [-1870.506] (-1888.268) (-1891.891) (-1875.358) * [-1882.117] (-1897.468) (-1880.621) (-1884.907) -- 0:08:24
Average standard deviation of split frequencies: 0.011284
286000 -- (-1893.475) (-1882.403) [-1878.207] (-1875.242) * (-1877.677) [-1871.768] (-1891.289) (-1886.908) -- 0:08:24
287000 -- (-1891.315) (-1887.343) [-1878.890] (-1887.654) * (-1884.432) [-1878.221] (-1871.696) (-1878.403) -- 0:08:24
288000 -- (-1882.858) (-1874.892) (-1877.201) [-1877.817] * (-1890.235) (-1868.990) (-1871.088) [-1883.507] -- 0:08:21
289000 -- (-1884.293) (-1877.221) [-1875.323] (-1895.911) * (-1878.867) (-1887.174) (-1872.559) [-1887.169] -- 0:08:21
290000 -- [-1870.937] (-1873.524) (-1885.482) (-1889.085) * (-1883.014) [-1884.541] (-1875.226) (-1901.972) -- 0:08:21
Average standard deviation of split frequencies: 0.011041
291000 -- (-1880.478) (-1892.173) [-1875.805] (-1899.339) * (-1881.157) [-1868.708] (-1893.217) (-1887.377) -- 0:08:21
292000 -- (-1901.609) [-1881.120] (-1872.026) (-1884.211) * (-1882.286) [-1871.709] (-1887.616) (-1881.096) -- 0:08:21
293000 -- [-1885.639] (-1906.913) (-1890.509) (-1893.232) * [-1871.817] (-1867.850) (-1886.557) (-1891.955) -- 0:08:19
294000 -- (-1893.166) (-1893.387) [-1872.418] (-1878.466) * (-1876.347) [-1857.263] (-1882.165) (-1872.481) -- 0:08:19
295000 -- (-1910.438) (-1880.679) (-1869.103) [-1867.973] * (-1880.188) (-1896.219) (-1879.516) [-1865.975] -- 0:08:19
Average standard deviation of split frequencies: 0.011638
296000 -- (-1897.703) (-1893.886) (-1882.134) [-1881.421] * [-1871.951] (-1885.468) (-1878.585) (-1888.912) -- 0:08:19
297000 -- [-1881.895] (-1885.167) (-1876.799) (-1876.097) * [-1878.774] (-1872.926) (-1882.643) (-1899.111) -- 0:08:17
298000 -- (-1891.681) (-1881.367) [-1875.034] (-1872.125) * [-1865.808] (-1883.175) (-1874.985) (-1872.044) -- 0:08:17
299000 -- [-1883.384] (-1885.103) (-1886.039) (-1879.240) * (-1885.982) (-1884.555) [-1881.963] (-1881.331) -- 0:08:17
300000 -- (-1881.449) (-1893.081) (-1886.758) [-1871.099] * (-1891.877) (-1891.129) (-1874.376) [-1879.407] -- 0:08:17
Average standard deviation of split frequencies: 0.011156
301000 -- (-1899.601) (-1894.819) (-1899.641) [-1878.248] * (-1877.859) (-1891.182) [-1875.604] (-1878.638) -- 0:08:14
302000 -- (-1882.158) [-1881.636] (-1886.659) (-1889.495) * (-1868.610) (-1891.688) [-1876.523] (-1879.280) -- 0:08:14
303000 -- (-1886.253) (-1871.074) [-1880.517] (-1897.887) * [-1874.479] (-1882.829) (-1877.351) (-1878.259) -- 0:08:14
304000 -- [-1872.467] (-1886.004) (-1878.719) (-1877.275) * (-1876.450) (-1879.641) [-1873.319] (-1895.851) -- 0:08:14
305000 -- (-1881.522) [-1877.889] (-1871.662) (-1870.103) * (-1884.353) (-1871.358) [-1877.478] (-1875.664) -- 0:08:12
Average standard deviation of split frequencies: 0.011495
306000 -- (-1879.201) (-1878.965) [-1871.904] (-1889.001) * [-1869.690] (-1876.892) (-1885.955) (-1878.993) -- 0:08:12
307000 -- (-1865.514) (-1880.997) [-1863.648] (-1887.775) * (-1884.433) [-1888.824] (-1888.929) (-1865.908) -- 0:08:12
308000 -- (-1879.287) [-1874.237] (-1877.078) (-1896.742) * (-1869.577) (-1872.816) [-1871.099] (-1870.755) -- 0:08:12
309000 -- (-1879.273) (-1885.857) (-1873.951) [-1876.722] * (-1870.493) (-1894.823) [-1873.700] (-1886.324) -- 0:08:09
310000 -- (-1901.018) (-1892.003) (-1882.792) [-1870.527] * [-1873.852] (-1890.000) (-1863.019) (-1882.066) -- 0:08:09
Average standard deviation of split frequencies: 0.010804
311000 -- (-1873.305) (-1881.682) (-1871.062) [-1876.244] * [-1873.189] (-1875.502) (-1876.456) (-1892.508) -- 0:08:09
312000 -- [-1877.174] (-1898.622) (-1875.002) (-1875.088) * [-1866.243] (-1869.163) (-1866.471) (-1883.245) -- 0:08:07
313000 -- (-1879.262) (-1888.189) [-1856.687] (-1873.300) * (-1890.020) [-1875.363] (-1875.746) (-1875.349) -- 0:08:07
314000 -- (-1877.626) (-1894.729) (-1865.738) [-1870.173] * (-1900.463) (-1881.053) (-1881.124) [-1866.932] -- 0:08:07
315000 -- (-1885.439) (-1885.530) (-1894.516) [-1872.510] * (-1889.089) [-1875.932] (-1877.850) (-1883.547) -- 0:08:07
Average standard deviation of split frequencies: 0.011159
316000 -- (-1888.356) (-1904.886) (-1882.765) [-1874.909] * (-1886.478) (-1867.262) (-1878.580) [-1882.517] -- 0:08:04
317000 -- (-1881.097) (-1898.571) [-1886.198] (-1867.626) * (-1891.890) (-1871.108) (-1877.225) [-1884.012] -- 0:08:04
318000 -- [-1872.249] (-1890.466) (-1883.203) (-1870.373) * (-1886.765) [-1884.385] (-1875.080) (-1876.332) -- 0:08:04
319000 -- [-1861.971] (-1887.571) (-1886.768) (-1896.626) * [-1862.827] (-1876.725) (-1896.080) (-1867.628) -- 0:08:04
320000 -- [-1872.077] (-1880.492) (-1870.559) (-1903.497) * (-1885.890) (-1889.496) [-1894.353] (-1870.836) -- 0:08:02
Average standard deviation of split frequencies: 0.011332
321000 -- (-1882.433) (-1885.841) [-1861.386] (-1899.019) * (-1878.817) (-1873.640) (-1890.840) [-1866.624] -- 0:08:02
322000 -- (-1876.410) (-1892.984) [-1876.718] (-1887.372) * (-1884.431) (-1892.334) (-1893.493) [-1875.028] -- 0:08:02
323000 -- (-1872.261) (-1884.176) [-1866.538] (-1903.645) * (-1882.678) (-1891.474) (-1871.579) [-1865.040] -- 0:08:02
324000 -- [-1864.272] (-1872.927) (-1878.888) (-1914.616) * (-1903.027) (-1883.035) (-1875.073) [-1867.887] -- 0:07:59
325000 -- (-1884.887) (-1895.003) [-1870.847] (-1914.978) * (-1900.709) (-1881.834) (-1882.895) [-1870.925] -- 0:07:59
Average standard deviation of split frequencies: 0.010725
326000 -- (-1899.440) [-1882.411] (-1888.287) (-1884.492) * (-1899.430) (-1867.849) (-1890.150) [-1866.134] -- 0:07:59
327000 -- (-1890.852) [-1888.414] (-1867.041) (-1876.945) * (-1904.003) (-1867.136) (-1884.227) [-1866.374] -- 0:07:59
328000 -- (-1886.675) (-1886.348) [-1873.026] (-1886.379) * [-1881.209] (-1874.151) (-1870.082) (-1876.874) -- 0:07:57
329000 -- [-1888.882] (-1896.641) (-1866.799) (-1903.421) * (-1892.619) (-1888.763) (-1887.997) [-1881.147] -- 0:07:57
330000 -- (-1889.885) (-1891.691) (-1870.630) [-1867.849] * (-1891.018) (-1878.727) [-1872.103] (-1871.906) -- 0:07:57
Average standard deviation of split frequencies: 0.010227
331000 -- (-1890.598) (-1880.862) (-1880.993) [-1874.851] * (-1896.464) (-1875.777) (-1877.683) [-1871.860] -- 0:07:56
332000 -- (-1895.100) (-1888.027) (-1889.758) [-1865.594] * (-1883.388) (-1870.716) [-1875.539] (-1875.322) -- 0:07:54
333000 -- (-1897.170) (-1871.464) (-1870.601) [-1861.466] * [-1872.581] (-1876.682) (-1871.726) (-1884.910) -- 0:07:54
334000 -- (-1899.007) (-1885.936) (-1879.207) [-1867.761] * (-1879.648) (-1879.464) [-1873.571] (-1902.025) -- 0:07:54
335000 -- (-1896.853) (-1867.922) [-1872.994] (-1869.346) * [-1881.835] (-1899.778) (-1877.269) (-1885.957) -- 0:07:54
Average standard deviation of split frequencies: 0.010309
336000 -- (-1893.530) [-1872.055] (-1880.062) (-1870.242) * (-1887.033) (-1893.806) (-1875.929) [-1877.365] -- 0:07:54
337000 -- (-1874.135) [-1861.132] (-1876.880) (-1880.233) * (-1878.078) (-1883.272) (-1885.686) [-1882.908] -- 0:07:52
338000 -- (-1877.524) (-1884.610) (-1874.915) [-1875.481] * [-1869.627] (-1893.358) (-1890.472) (-1877.791) -- 0:07:52
339000 -- (-1885.818) (-1886.671) (-1876.039) [-1869.880] * (-1870.032) (-1896.047) (-1889.519) [-1857.824] -- 0:07:51
340000 -- (-1880.760) [-1871.919] (-1891.418) (-1885.179) * [-1871.611] (-1880.067) (-1890.431) (-1875.948) -- 0:07:49
Average standard deviation of split frequencies: 0.008664
341000 -- (-1877.825) (-1889.084) [-1882.257] (-1881.148) * [-1877.511] (-1898.142) (-1871.696) (-1886.867) -- 0:07:49
342000 -- (-1887.302) (-1887.961) [-1865.271] (-1883.262) * (-1881.685) (-1881.246) (-1871.707) [-1869.173] -- 0:07:49
343000 -- (-1879.934) (-1888.674) [-1881.929] (-1882.652) * [-1876.000] (-1897.579) (-1880.586) (-1889.643) -- 0:07:49
344000 -- (-1892.175) (-1869.141) (-1881.154) [-1875.228] * (-1894.663) (-1899.888) [-1879.124] (-1886.219) -- 0:07:49
345000 -- (-1891.315) (-1877.073) (-1895.529) [-1879.034] * [-1889.429] (-1887.373) (-1877.266) (-1896.051) -- 0:07:47
Average standard deviation of split frequencies: 0.008352
346000 -- [-1877.356] (-1870.898) (-1906.745) (-1873.918) * (-1891.603) (-1907.674) [-1876.533] (-1892.957) -- 0:07:46
347000 -- [-1873.607] (-1892.145) (-1900.249) (-1879.726) * (-1907.401) (-1907.637) (-1869.086) [-1874.926] -- 0:07:46
348000 -- [-1877.524] (-1894.687) (-1882.052) (-1883.116) * (-1874.899) (-1893.475) [-1873.031] (-1892.341) -- 0:07:44
349000 -- [-1865.131] (-1890.884) (-1878.444) (-1867.242) * [-1875.336] (-1894.477) (-1875.107) (-1873.922) -- 0:07:44
350000 -- [-1864.069] (-1893.660) (-1878.652) (-1874.875) * [-1874.928] (-1886.153) (-1884.188) (-1879.819) -- 0:07:44
Average standard deviation of split frequencies: 0.008650
351000 -- [-1864.209] (-1887.157) (-1877.051) (-1881.669) * (-1880.412) (-1880.109) (-1875.774) [-1876.349] -- 0:07:44
352000 -- (-1874.392) [-1877.028] (-1888.842) (-1879.638) * (-1882.738) (-1879.719) (-1879.664) [-1877.289] -- 0:07:42
353000 -- [-1880.220] (-1887.849) (-1889.769) (-1875.044) * (-1894.972) [-1875.054] (-1886.822) (-1884.360) -- 0:07:41
354000 -- [-1870.166] (-1880.270) (-1891.533) (-1876.081) * [-1876.655] (-1882.354) (-1872.089) (-1876.688) -- 0:07:41
355000 -- (-1883.350) (-1889.146) (-1885.351) [-1869.481] * [-1870.396] (-1881.989) (-1883.769) (-1880.130) -- 0:07:41
Average standard deviation of split frequencies: 0.008636
356000 -- (-1875.806) [-1871.177] (-1881.889) (-1883.355) * (-1887.947) (-1877.844) [-1874.656] (-1888.525) -- 0:07:39
357000 -- (-1885.799) [-1872.363] (-1910.729) (-1881.052) * [-1887.224] (-1892.953) (-1882.591) (-1872.176) -- 0:07:39
358000 -- (-1881.473) (-1892.654) (-1868.393) [-1889.349] * (-1886.778) (-1891.878) [-1868.650] (-1874.482) -- 0:07:39
359000 -- (-1873.073) [-1887.469] (-1873.442) (-1887.136) * (-1891.772) (-1879.911) (-1869.650) [-1881.056] -- 0:07:37
360000 -- [-1872.859] (-1875.991) (-1880.857) (-1874.086) * [-1883.328] (-1874.976) (-1879.992) (-1897.582) -- 0:07:36
Average standard deviation of split frequencies: 0.008354
361000 -- [-1883.316] (-1890.355) (-1892.179) (-1878.937) * (-1904.670) [-1868.346] (-1863.850) (-1883.110) -- 0:07:34
362000 -- (-1879.418) [-1877.951] (-1895.510) (-1876.960) * (-1884.913) (-1876.950) [-1873.712] (-1884.637) -- 0:07:34
363000 -- (-1894.195) (-1886.038) (-1888.082) [-1881.530] * (-1882.829) (-1877.660) (-1881.936) [-1883.774] -- 0:07:34
364000 -- (-1898.954) (-1876.724) (-1896.203) [-1863.613] * (-1896.512) (-1877.873) [-1868.083] (-1875.602) -- 0:07:32
365000 -- (-1893.494) (-1879.426) (-1891.653) [-1862.453] * (-1879.429) (-1878.751) (-1875.507) [-1865.570] -- 0:07:32
Average standard deviation of split frequencies: 0.009016
366000 -- (-1879.442) [-1873.865] (-1886.078) (-1877.674) * (-1890.602) [-1857.619] (-1870.454) (-1881.463) -- 0:07:30
367000 -- [-1868.786] (-1880.362) (-1884.968) (-1872.876) * (-1893.819) [-1867.903] (-1882.716) (-1894.459) -- 0:07:30
368000 -- (-1867.731) (-1903.859) (-1888.023) [-1876.664] * (-1868.089) [-1872.954] (-1879.403) (-1876.660) -- 0:07:28
369000 -- (-1874.319) (-1904.251) (-1899.601) [-1862.766] * (-1881.366) (-1879.504) [-1873.726] (-1869.966) -- 0:07:28
370000 -- [-1875.436] (-1875.524) (-1890.435) (-1865.582) * (-1879.724) (-1870.629) [-1865.402] (-1884.997) -- 0:07:26
Average standard deviation of split frequencies: 0.008902
371000 -- (-1889.197) (-1892.774) (-1879.839) [-1880.428] * (-1894.406) [-1866.530] (-1883.203) (-1874.157) -- 0:07:25
372000 -- (-1892.541) [-1880.698] (-1886.987) (-1880.392) * (-1876.110) (-1877.484) (-1881.180) [-1871.785] -- 0:07:23
373000 -- (-1879.025) [-1876.755] (-1875.540) (-1878.332) * [-1873.851] (-1883.449) (-1865.077) (-1878.072) -- 0:07:23
374000 -- (-1891.617) (-1881.574) (-1881.914) [-1875.501] * (-1879.986) [-1873.437] (-1869.494) (-1891.315) -- 0:07:21
375000 -- (-1882.046) (-1899.872) (-1889.651) [-1861.916] * [-1865.281] (-1882.301) (-1880.574) (-1882.515) -- 0:07:21
Average standard deviation of split frequencies: 0.009321
376000 -- (-1888.702) [-1867.236] (-1882.781) (-1884.934) * [-1859.735] (-1885.281) (-1862.771) (-1886.505) -- 0:07:21
377000 -- (-1890.608) (-1867.278) (-1881.836) [-1869.062] * [-1868.034] (-1892.150) (-1873.640) (-1901.250) -- 0:07:19
378000 -- [-1860.163] (-1876.456) (-1878.624) (-1887.601) * (-1874.846) (-1886.946) [-1867.623] (-1892.207) -- 0:07:19
379000 -- [-1866.817] (-1879.644) (-1871.140) (-1878.578) * [-1871.536] (-1878.380) (-1877.471) (-1889.835) -- 0:07:19
380000 -- [-1880.458] (-1875.252) (-1877.654) (-1886.760) * [-1866.448] (-1881.472) (-1870.612) (-1891.614) -- 0:07:18
Average standard deviation of split frequencies: 0.009315
381000 -- (-1890.595) [-1870.570] (-1875.964) (-1880.293) * (-1881.976) (-1892.407) [-1879.572] (-1899.245) -- 0:07:17
382000 -- (-1894.480) (-1885.877) (-1881.452) [-1872.731] * (-1888.329) (-1900.047) [-1890.001] (-1877.256) -- 0:07:16
383000 -- [-1882.889] (-1887.731) (-1883.581) (-1876.308) * (-1874.904) (-1885.343) (-1888.679) [-1871.266] -- 0:07:16
384000 -- (-1875.542) [-1869.565] (-1871.008) (-1876.909) * (-1883.857) [-1875.857] (-1884.884) (-1887.960) -- 0:07:16
385000 -- (-1881.076) (-1872.690) (-1885.091) [-1876.379] * [-1865.536] (-1888.259) (-1879.375) (-1874.684) -- 0:07:14
Average standard deviation of split frequencies: 0.009982
386000 -- (-1875.462) [-1877.805] (-1876.423) (-1874.676) * (-1871.790) (-1900.659) (-1878.300) [-1869.436] -- 0:07:14
387000 -- (-1884.230) [-1886.621] (-1877.051) (-1901.198) * (-1871.674) [-1882.336] (-1891.543) (-1890.950) -- 0:07:14
388000 -- (-1882.544) (-1862.907) [-1879.368] (-1906.038) * [-1865.779] (-1875.826) (-1884.964) (-1890.687) -- 0:07:13
389000 -- (-1884.858) (-1877.614) (-1900.945) [-1878.787] * [-1872.289] (-1880.303) (-1879.446) (-1872.487) -- 0:07:11
390000 -- (-1874.577) (-1883.979) [-1874.596] (-1876.849) * (-1870.919) (-1864.316) [-1872.187] (-1883.446) -- 0:07:11
Average standard deviation of split frequencies: 0.009968
391000 -- (-1873.630) (-1879.881) [-1887.441] (-1877.587) * [-1867.333] (-1870.486) (-1892.513) (-1897.347) -- 0:07:11
392000 -- (-1882.456) [-1871.238] (-1869.064) (-1861.334) * (-1891.211) (-1869.055) [-1879.011] (-1895.008) -- 0:07:11
393000 -- (-1880.611) [-1877.691] (-1879.480) (-1878.810) * (-1869.842) (-1880.746) [-1873.404] (-1899.951) -- 0:07:09
394000 -- (-1880.238) (-1879.232) [-1867.528] (-1879.209) * [-1880.801] (-1900.955) (-1880.008) (-1875.688) -- 0:07:09
395000 -- (-1867.298) [-1871.210] (-1878.943) (-1883.557) * [-1868.156] (-1889.674) (-1877.034) (-1880.268) -- 0:07:08
Average standard deviation of split frequencies: 0.009834
396000 -- [-1867.837] (-1875.773) (-1881.295) (-1896.890) * (-1878.669) (-1888.998) (-1877.828) [-1881.115] -- 0:07:08
397000 -- (-1871.233) [-1879.034] (-1892.311) (-1891.335) * (-1887.946) (-1896.232) [-1869.799] (-1874.471) -- 0:07:06
398000 -- (-1866.931) [-1875.500] (-1885.150) (-1916.692) * (-1881.506) (-1888.037) (-1893.452) [-1867.497] -- 0:07:06
399000 -- (-1871.620) (-1886.056) (-1877.704) [-1883.034] * (-1894.462) [-1872.690] (-1902.883) (-1877.991) -- 0:07:04
400000 -- (-1869.608) (-1886.673) [-1867.731] (-1888.525) * (-1892.686) [-1863.035] (-1891.871) (-1888.094) -- 0:07:04
Average standard deviation of split frequencies: 0.009668
401000 -- [-1871.507] (-1880.881) (-1873.011) (-1882.006) * (-1890.176) [-1860.475] (-1899.537) (-1874.111) -- 0:07:04
402000 -- [-1867.570] (-1900.917) (-1881.209) (-1863.579) * (-1898.784) (-1869.014) (-1888.333) [-1880.983] -- 0:07:02
403000 -- [-1865.813] (-1882.238) (-1887.435) (-1878.642) * (-1892.094) [-1871.120] (-1894.283) (-1877.829) -- 0:07:02
404000 -- (-1880.668) (-1880.930) (-1887.215) [-1872.449] * (-1876.252) (-1874.686) (-1889.765) [-1863.982] -- 0:07:01
405000 -- (-1888.030) (-1875.155) (-1885.829) [-1881.430] * (-1888.031) (-1868.453) (-1890.619) [-1863.922] -- 0:07:01
Average standard deviation of split frequencies: 0.010298
406000 -- (-1887.735) (-1878.318) [-1872.347] (-1876.124) * (-1891.105) [-1866.447] (-1878.226) (-1885.134) -- 0:06:59
407000 -- (-1881.782) [-1875.514] (-1882.288) (-1898.292) * (-1900.132) (-1880.257) [-1873.157] (-1893.552) -- 0:06:59
408000 -- (-1879.540) [-1871.832] (-1890.261) (-1882.904) * (-1887.625) (-1881.317) (-1863.551) [-1878.753] -- 0:06:59
409000 -- (-1888.065) (-1865.161) [-1873.351] (-1899.879) * (-1889.607) (-1877.248) [-1877.239] (-1881.413) -- 0:06:59
410000 -- (-1875.871) [-1863.760] (-1880.238) (-1886.329) * (-1890.379) [-1871.067] (-1875.605) (-1893.160) -- 0:06:57
Average standard deviation of split frequencies: 0.010481
411000 -- (-1877.684) [-1874.099] (-1874.599) (-1909.644) * (-1898.289) [-1865.910] (-1879.089) (-1868.884) -- 0:06:57
412000 -- (-1876.225) [-1869.811] (-1879.634) (-1911.689) * (-1889.539) [-1872.403] (-1878.983) (-1873.373) -- 0:06:56
413000 -- (-1881.688) [-1873.663] (-1881.428) (-1875.807) * (-1911.034) (-1874.129) [-1871.046] (-1876.665) -- 0:06:56
414000 -- (-1875.886) [-1871.602] (-1889.203) (-1884.563) * (-1905.547) [-1870.939] (-1884.469) (-1871.457) -- 0:06:54
415000 -- (-1877.516) (-1876.538) (-1880.347) [-1885.369] * (-1889.959) (-1878.667) (-1873.023) [-1859.023] -- 0:06:54
Average standard deviation of split frequencies: 0.012229
416000 -- [-1873.541] (-1879.216) (-1876.960) (-1886.215) * (-1879.971) (-1867.019) (-1864.020) [-1868.007] -- 0:06:54
417000 -- (-1876.280) (-1885.972) [-1870.870] (-1897.946) * (-1867.227) (-1865.445) [-1875.031] (-1881.441) -- 0:06:52
418000 -- (-1877.754) (-1890.061) (-1884.165) [-1867.905] * (-1884.338) [-1867.578] (-1890.761) (-1877.296) -- 0:06:52
419000 -- (-1885.540) [-1884.597] (-1883.896) (-1876.005) * (-1876.231) [-1862.120] (-1887.026) (-1886.344) -- 0:06:51
420000 -- (-1886.945) (-1872.043) (-1887.197) [-1874.475] * (-1889.584) (-1876.302) (-1896.862) [-1870.592] -- 0:06:51
Average standard deviation of split frequencies: 0.011813
421000 -- (-1875.036) [-1877.091] (-1896.860) (-1865.943) * (-1873.463) (-1879.785) (-1895.902) [-1870.721] -- 0:06:49
422000 -- (-1877.723) (-1885.322) (-1877.473) [-1866.651] * (-1863.593) [-1871.171] (-1884.818) (-1878.686) -- 0:06:49
423000 -- (-1864.676) (-1878.955) (-1891.366) [-1867.630] * (-1863.810) (-1884.972) (-1886.664) [-1865.167] -- 0:06:49
424000 -- [-1870.257] (-1881.101) (-1899.996) (-1878.551) * [-1876.340] (-1883.002) (-1870.181) (-1902.676) -- 0:06:48
425000 -- (-1885.148) (-1887.802) (-1888.872) [-1868.850] * [-1877.543] (-1883.210) (-1878.840) (-1885.185) -- 0:06:47
Average standard deviation of split frequencies: 0.011757
426000 -- (-1887.280) (-1884.207) (-1882.743) [-1881.596] * [-1869.935] (-1880.726) (-1905.151) (-1896.240) -- 0:06:46
427000 -- [-1880.344] (-1881.703) (-1892.788) (-1873.358) * (-1882.036) (-1897.973) [-1880.721] (-1892.795) -- 0:06:46
428000 -- (-1869.328) [-1873.070] (-1896.874) (-1875.854) * (-1880.387) (-1891.001) (-1884.388) [-1880.360] -- 0:06:46
429000 -- (-1878.073) [-1883.450] (-1892.712) (-1889.626) * [-1877.776] (-1890.199) (-1878.211) (-1889.911) -- 0:06:44
430000 -- [-1877.601] (-1879.735) (-1886.126) (-1883.913) * (-1875.147) (-1897.083) [-1880.303] (-1888.002) -- 0:06:44
Average standard deviation of split frequencies: 0.012177
431000 -- (-1885.976) (-1883.349) [-1879.610] (-1872.352) * [-1880.132] (-1895.079) (-1899.861) (-1877.258) -- 0:06:43
432000 -- [-1870.658] (-1896.425) (-1881.262) (-1879.934) * (-1885.023) (-1907.229) (-1898.583) [-1866.827] -- 0:06:43
433000 -- (-1884.854) (-1896.643) [-1865.788] (-1879.588) * [-1879.801] (-1887.019) (-1873.475) (-1864.845) -- 0:06:42
434000 -- (-1879.516) (-1896.923) (-1889.336) [-1876.468] * (-1885.871) (-1875.504) (-1884.167) [-1860.915] -- 0:06:41
435000 -- (-1883.931) (-1891.194) (-1875.470) [-1868.049] * (-1894.161) (-1875.417) [-1875.337] (-1880.175) -- 0:06:41
Average standard deviation of split frequencies: 0.012073
436000 -- (-1874.335) (-1889.892) [-1873.913] (-1878.298) * (-1894.635) (-1872.414) [-1873.782] (-1885.075) -- 0:06:41
437000 -- [-1865.747] (-1877.923) (-1890.507) (-1873.180) * (-1881.985) [-1873.066] (-1879.934) (-1875.872) -- 0:06:39
438000 -- [-1872.018] (-1874.409) (-1893.611) (-1873.734) * (-1886.002) (-1899.526) (-1867.172) [-1875.760] -- 0:06:39
439000 -- (-1881.206) (-1883.268) [-1886.881] (-1881.683) * (-1887.377) (-1886.269) (-1871.975) [-1880.118] -- 0:06:38
440000 -- (-1879.439) (-1892.044) (-1902.747) [-1873.310] * (-1862.224) [-1869.063] (-1872.056) (-1874.793) -- 0:06:38
Average standard deviation of split frequencies: 0.011723
441000 -- [-1868.877] (-1895.140) (-1903.480) (-1875.599) * [-1871.122] (-1903.384) (-1884.644) (-1902.399) -- 0:06:36
442000 -- (-1867.993) (-1903.313) [-1877.862] (-1874.542) * (-1878.234) (-1881.103) (-1875.847) [-1874.778] -- 0:06:36
443000 -- [-1875.813] (-1908.192) (-1884.681) (-1882.451) * (-1877.721) [-1878.111] (-1875.411) (-1884.987) -- 0:06:36
444000 -- [-1857.846] (-1908.867) (-1869.338) (-1880.735) * (-1894.269) (-1897.061) [-1869.058] (-1884.202) -- 0:06:34
445000 -- (-1879.612) (-1895.056) [-1872.331] (-1867.020) * (-1880.000) (-1889.950) [-1879.658] (-1882.853) -- 0:06:34
Average standard deviation of split frequencies: 0.011489
446000 -- [-1872.362] (-1878.386) (-1873.157) (-1874.856) * (-1888.343) (-1879.557) (-1872.319) [-1883.159] -- 0:06:33
447000 -- (-1867.116) (-1891.431) (-1877.988) [-1878.074] * (-1891.265) (-1896.830) [-1869.958] (-1883.171) -- 0:06:32
448000 -- (-1876.531) (-1889.428) [-1883.896] (-1881.733) * (-1883.709) (-1884.114) (-1900.876) [-1876.467] -- 0:06:31
449000 -- (-1879.726) [-1892.143] (-1875.049) (-1887.580) * (-1886.584) (-1872.514) (-1889.719) [-1866.709] -- 0:06:30
450000 -- (-1882.725) (-1896.998) (-1880.267) [-1872.378] * [-1877.876] (-1870.024) (-1873.150) (-1873.673) -- 0:06:29
Average standard deviation of split frequencies: 0.011552
451000 -- (-1893.282) (-1892.060) (-1867.382) [-1868.523] * [-1870.191] (-1887.703) (-1875.378) (-1878.737) -- 0:06:29
452000 -- (-1898.111) (-1868.449) (-1884.048) [-1865.750] * (-1878.124) (-1899.847) (-1872.017) [-1874.079] -- 0:06:29
453000 -- (-1898.838) (-1875.524) (-1891.258) [-1862.805] * (-1879.849) (-1898.608) (-1870.674) [-1874.005] -- 0:06:27
454000 -- (-1889.323) (-1870.889) (-1904.199) [-1879.341] * (-1887.408) (-1882.878) (-1869.097) [-1862.194] -- 0:06:27
455000 -- [-1889.962] (-1877.349) (-1890.975) (-1875.894) * [-1872.657] (-1874.432) (-1877.519) (-1871.105) -- 0:06:26
Average standard deviation of split frequencies: 0.011057
456000 -- [-1871.996] (-1882.422) (-1880.082) (-1872.483) * (-1887.070) [-1868.415] (-1885.391) (-1867.982) -- 0:06:26
457000 -- [-1872.695] (-1867.218) (-1889.813) (-1884.011) * (-1871.674) (-1891.168) [-1875.104] (-1884.329) -- 0:06:24
458000 -- [-1871.280] (-1872.993) (-1881.625) (-1873.834) * (-1883.036) [-1872.454] (-1887.742) (-1887.491) -- 0:06:24
459000 -- (-1870.118) (-1889.659) [-1869.821] (-1890.044) * (-1874.336) (-1881.222) [-1870.586] (-1887.585) -- 0:06:24
460000 -- [-1864.760] (-1897.918) (-1868.566) (-1883.953) * [-1885.592] (-1884.057) (-1872.783) (-1887.149) -- 0:06:23
Average standard deviation of split frequencies: 0.011167
461000 -- (-1869.087) (-1895.018) (-1877.497) [-1881.535] * [-1886.557] (-1889.157) (-1885.696) (-1888.678) -- 0:06:23
462000 -- (-1882.941) (-1906.000) (-1874.598) [-1875.720] * (-1870.685) (-1885.566) [-1878.076] (-1885.726) -- 0:06:21
463000 -- (-1892.457) (-1894.964) (-1885.265) [-1871.702] * [-1891.351] (-1899.817) (-1881.317) (-1887.967) -- 0:06:21
464000 -- (-1884.055) [-1868.702] (-1889.668) (-1879.884) * (-1875.740) (-1893.109) (-1874.615) [-1881.358] -- 0:06:21
465000 -- [-1883.278] (-1871.469) (-1885.677) (-1872.892) * (-1885.015) (-1897.666) [-1858.686] (-1888.257) -- 0:06:20
Average standard deviation of split frequencies: 0.010732
466000 -- (-1885.187) (-1885.437) (-1877.735) [-1876.395] * (-1889.888) (-1874.364) [-1868.606] (-1878.521) -- 0:06:19
467000 -- (-1884.495) [-1874.379] (-1874.338) (-1873.796) * (-1897.195) (-1876.997) (-1886.117) [-1872.164] -- 0:06:18
468000 -- (-1881.527) (-1878.766) [-1869.501] (-1872.465) * [-1880.234] (-1888.755) (-1887.679) (-1876.963) -- 0:06:18
469000 -- (-1884.098) [-1881.517] (-1875.902) (-1882.285) * (-1885.322) (-1898.771) [-1882.298] (-1862.853) -- 0:06:18
470000 -- [-1874.563] (-1867.621) (-1869.571) (-1889.260) * (-1879.192) (-1888.584) (-1877.340) [-1865.240] -- 0:06:16
Average standard deviation of split frequencies: 0.010495
471000 -- (-1869.577) (-1878.789) [-1863.739] (-1879.819) * (-1876.246) (-1876.629) [-1870.632] (-1869.762) -- 0:06:16
472000 -- (-1867.771) (-1876.034) [-1874.052] (-1880.134) * (-1887.910) [-1868.608] (-1869.961) (-1882.052) -- 0:06:15
473000 -- [-1864.704] (-1877.899) (-1892.046) (-1879.051) * (-1897.788) [-1875.382] (-1872.774) (-1879.554) -- 0:06:15
474000 -- [-1866.747] (-1870.166) (-1879.610) (-1872.580) * (-1885.303) [-1881.796] (-1873.327) (-1886.026) -- 0:06:13
475000 -- (-1865.237) (-1890.237) (-1875.634) [-1870.644] * (-1881.837) (-1895.718) [-1887.331] (-1873.466) -- 0:06:13
Average standard deviation of split frequencies: 0.010894
476000 -- (-1870.181) [-1876.424] (-1883.979) (-1874.783) * (-1878.538) (-1905.545) [-1877.299] (-1872.416) -- 0:06:12
477000 -- (-1874.320) [-1877.616] (-1897.503) (-1879.550) * (-1896.798) (-1872.813) [-1875.082] (-1878.843) -- 0:06:11
478000 -- (-1870.212) (-1876.524) (-1894.851) [-1874.404] * (-1883.243) [-1862.037] (-1877.965) (-1870.993) -- 0:06:10
479000 -- [-1878.764] (-1877.178) (-1889.228) (-1884.738) * (-1894.142) [-1873.417] (-1880.252) (-1873.462) -- 0:06:09
480000 -- (-1883.285) [-1865.644] (-1889.476) (-1880.049) * (-1877.849) (-1863.156) [-1879.059] (-1888.955) -- 0:06:09
Average standard deviation of split frequencies: 0.011939
481000 -- (-1876.429) [-1865.512] (-1886.749) (-1883.954) * (-1874.753) (-1880.708) (-1882.838) [-1882.016] -- 0:06:07
482000 -- (-1877.254) (-1889.161) [-1861.298] (-1874.967) * (-1884.076) [-1872.196] (-1869.479) (-1880.368) -- 0:06:07
483000 -- (-1882.304) (-1885.500) (-1871.978) [-1865.101] * (-1887.661) (-1876.461) [-1874.316] (-1878.026) -- 0:06:07
484000 -- (-1892.117) (-1883.533) (-1899.059) [-1875.419] * (-1888.963) [-1873.972] (-1871.707) (-1884.035) -- 0:06:06
485000 -- (-1887.712) (-1877.740) [-1862.832] (-1871.343) * (-1875.297) (-1886.200) [-1867.833] (-1877.503) -- 0:06:05
Average standard deviation of split frequencies: 0.012061
486000 -- (-1884.775) (-1878.914) (-1865.379) [-1877.478] * [-1878.169] (-1889.469) (-1867.496) (-1886.211) -- 0:06:04
487000 -- (-1883.555) [-1873.977] (-1876.421) (-1880.502) * (-1883.585) (-1890.472) [-1878.352] (-1895.389) -- 0:06:04
488000 -- (-1895.679) [-1880.102] (-1873.222) (-1880.138) * (-1895.553) [-1878.419] (-1872.277) (-1882.547) -- 0:06:04
489000 -- (-1899.059) [-1867.078] (-1885.502) (-1889.225) * [-1875.558] (-1884.905) (-1904.502) (-1888.503) -- 0:06:02
490000 -- (-1889.325) (-1876.534) [-1873.957] (-1895.248) * (-1889.299) [-1876.356] (-1894.297) (-1899.442) -- 0:06:02
Average standard deviation of split frequencies: 0.012030
491000 -- (-1905.065) (-1881.699) [-1879.257] (-1890.323) * (-1883.493) [-1863.101] (-1879.975) (-1891.680) -- 0:06:00
492000 -- (-1886.385) [-1869.226] (-1878.366) (-1885.496) * [-1874.713] (-1872.252) (-1893.983) (-1879.626) -- 0:06:00
493000 -- (-1898.948) [-1866.457] (-1873.831) (-1871.442) * (-1874.981) (-1890.972) (-1883.774) [-1871.209] -- 0:05:59
494000 -- (-1887.512) (-1880.034) (-1882.744) [-1866.476] * (-1881.966) [-1881.357] (-1870.976) (-1885.479) -- 0:05:58
495000 -- (-1896.237) (-1876.306) (-1890.270) [-1875.136] * [-1884.200] (-1891.666) (-1878.361) (-1897.735) -- 0:05:58
Average standard deviation of split frequencies: 0.011694
496000 -- (-1883.774) [-1873.366] (-1876.859) (-1875.597) * (-1888.752) (-1885.915) (-1882.741) [-1878.652] -- 0:05:57
497000 -- (-1902.653) [-1863.843] (-1876.245) (-1873.677) * (-1862.826) (-1895.907) [-1868.941] (-1873.972) -- 0:05:56
498000 -- (-1882.025) (-1889.590) (-1878.625) [-1869.887] * (-1872.958) (-1887.060) (-1873.754) [-1870.885] -- 0:05:55
499000 -- (-1875.291) (-1882.588) (-1896.079) [-1875.673] * (-1879.369) (-1888.964) (-1868.557) [-1874.591] -- 0:05:55
500000 -- (-1888.208) (-1874.858) [-1874.712] (-1868.065) * (-1883.933) (-1883.759) (-1879.874) [-1867.964] -- 0:05:55
Average standard deviation of split frequencies: 0.011462
501000 -- (-1873.326) (-1873.478) [-1875.010] (-1890.029) * (-1879.167) (-1882.174) (-1894.050) [-1868.092] -- 0:05:53
502000 -- [-1874.500] (-1882.014) (-1890.017) (-1887.788) * (-1883.717) [-1867.354] (-1879.326) (-1875.493) -- 0:05:53
503000 -- [-1871.954] (-1879.020) (-1874.284) (-1893.312) * (-1885.039) (-1899.444) [-1878.426] (-1895.440) -- 0:05:52
504000 -- [-1870.073] (-1874.700) (-1902.758) (-1883.147) * [-1883.987] (-1887.002) (-1890.844) (-1900.457) -- 0:05:52
505000 -- [-1874.638] (-1890.893) (-1886.010) (-1878.075) * [-1863.663] (-1874.087) (-1894.093) (-1888.625) -- 0:05:50
Average standard deviation of split frequencies: 0.010572
506000 -- (-1892.772) [-1877.376] (-1875.997) (-1881.381) * (-1868.729) [-1877.862] (-1883.164) (-1884.224) -- 0:05:50
507000 -- (-1900.120) [-1880.429] (-1884.811) (-1892.790) * [-1869.629] (-1879.108) (-1876.024) (-1881.097) -- 0:05:50
508000 -- (-1913.019) [-1885.847] (-1880.113) (-1877.391) * (-1877.277) (-1889.835) [-1871.711] (-1891.669) -- 0:05:49
509000 -- (-1892.854) (-1886.908) (-1877.828) [-1868.259] * (-1876.765) (-1879.920) (-1887.961) [-1880.513] -- 0:05:48
510000 -- (-1892.215) (-1883.827) [-1869.461] (-1899.515) * [-1872.910] (-1888.187) (-1885.676) (-1882.541) -- 0:05:47
Average standard deviation of split frequencies: 0.010957
511000 -- (-1884.331) (-1886.455) [-1880.177] (-1881.741) * (-1864.960) (-1878.087) [-1884.326] (-1890.162) -- 0:05:47
512000 -- (-1893.945) [-1875.126] (-1871.680) (-1869.499) * (-1881.195) [-1874.346] (-1870.558) (-1885.515) -- 0:05:45
513000 -- [-1865.666] (-1893.642) (-1869.443) (-1877.223) * [-1876.499] (-1883.289) (-1873.231) (-1879.956) -- 0:05:45
514000 -- [-1866.187] (-1914.802) (-1891.011) (-1892.533) * (-1884.563) (-1871.390) [-1887.368] (-1875.779) -- 0:05:45
515000 -- (-1876.965) (-1887.509) (-1891.631) [-1876.433] * [-1875.190] (-1885.807) (-1882.113) (-1877.556) -- 0:05:43
Average standard deviation of split frequencies: 0.010764
516000 -- (-1876.900) (-1895.912) (-1886.979) [-1884.278] * (-1884.092) [-1878.881] (-1894.907) (-1874.180) -- 0:05:43
517000 -- (-1882.365) (-1890.454) [-1867.730] (-1885.671) * (-1888.620) [-1880.992] (-1881.111) (-1885.393) -- 0:05:42
518000 -- [-1864.656] (-1880.493) (-1893.999) (-1895.152) * [-1873.745] (-1877.993) (-1872.228) (-1892.010) -- 0:05:41
519000 -- (-1877.736) [-1880.374] (-1873.953) (-1883.113) * (-1886.225) [-1887.729] (-1876.492) (-1913.153) -- 0:05:41
520000 -- (-1887.119) (-1883.497) (-1889.550) [-1889.035] * (-1893.998) (-1880.555) (-1880.972) [-1878.947] -- 0:05:40
Average standard deviation of split frequencies: 0.010314
521000 -- (-1885.732) [-1880.391] (-1879.225) (-1881.055) * (-1919.654) (-1889.248) (-1869.425) [-1873.814] -- 0:05:40
522000 -- (-1892.231) (-1874.613) [-1882.690] (-1886.873) * (-1908.969) [-1863.285] (-1897.122) (-1878.202) -- 0:05:38
523000 -- (-1874.085) (-1879.274) (-1876.586) [-1877.599] * (-1899.056) (-1869.198) (-1883.364) [-1876.922] -- 0:05:38
524000 -- (-1881.474) (-1877.289) [-1874.216] (-1869.630) * (-1902.068) [-1878.180] (-1900.871) (-1883.860) -- 0:05:37
525000 -- (-1864.637) (-1887.311) [-1878.624] (-1878.923) * (-1904.102) [-1870.570] (-1909.150) (-1886.523) -- 0:05:37
Average standard deviation of split frequencies: 0.009858
526000 -- (-1872.756) (-1888.180) (-1872.476) [-1873.223] * (-1894.228) [-1877.466] (-1890.450) (-1879.780) -- 0:05:36
527000 -- [-1876.484] (-1879.892) (-1877.698) (-1871.442) * (-1903.822) [-1872.275] (-1883.853) (-1876.458) -- 0:05:35
528000 -- (-1892.594) (-1881.020) (-1871.364) [-1874.297] * (-1904.321) (-1879.136) (-1882.939) [-1880.509] -- 0:05:35
529000 -- (-1880.629) (-1896.190) (-1873.527) [-1870.849] * (-1901.006) (-1880.120) [-1878.405] (-1880.327) -- 0:05:34
530000 -- (-1883.744) (-1892.903) [-1870.829] (-1873.384) * (-1884.003) (-1877.076) (-1885.315) [-1864.022] -- 0:05:33
Average standard deviation of split frequencies: 0.010892
531000 -- (-1885.926) [-1885.016] (-1876.099) (-1876.388) * (-1881.261) (-1904.188) (-1908.970) [-1867.862] -- 0:05:32
532000 -- (-1875.669) (-1873.181) [-1877.799] (-1878.872) * (-1895.627) (-1890.380) (-1886.656) [-1874.877] -- 0:05:32
533000 -- (-1875.930) (-1870.403) (-1873.142) [-1856.949] * (-1890.484) (-1884.428) (-1908.103) [-1868.832] -- 0:05:32
534000 -- (-1882.430) (-1866.408) (-1874.843) [-1864.935] * (-1882.731) [-1882.577] (-1887.194) (-1867.754) -- 0:05:30
535000 -- (-1886.023) (-1886.383) (-1879.529) [-1869.702] * (-1896.509) [-1878.084] (-1895.967) (-1866.101) -- 0:05:30
Average standard deviation of split frequencies: 0.011510
536000 -- [-1877.667] (-1887.452) (-1879.764) (-1868.817) * [-1879.816] (-1881.330) (-1900.224) (-1869.604) -- 0:05:29
537000 -- (-1882.097) (-1883.743) (-1889.508) [-1875.594] * (-1883.219) [-1863.681] (-1888.013) (-1879.908) -- 0:05:28
538000 -- (-1882.748) (-1877.025) (-1875.634) [-1869.013] * (-1876.265) (-1871.833) (-1881.567) [-1871.789] -- 0:05:28
539000 -- (-1877.490) (-1877.879) [-1863.266] (-1879.661) * [-1872.128] (-1901.730) (-1875.110) (-1879.918) -- 0:05:27
540000 -- (-1881.065) (-1879.145) [-1868.494] (-1883.475) * (-1880.082) (-1911.312) (-1878.505) [-1883.515] -- 0:05:27
Average standard deviation of split frequencies: 0.010880
541000 -- (-1886.144) [-1868.116] (-1876.143) (-1885.543) * (-1874.382) [-1881.642] (-1874.405) (-1881.745) -- 0:05:25
542000 -- (-1899.009) [-1870.986] (-1883.631) (-1878.937) * (-1884.894) (-1876.755) (-1881.086) [-1881.267] -- 0:05:25
543000 -- (-1893.253) [-1879.756] (-1871.837) (-1875.790) * (-1892.211) [-1872.638] (-1899.612) (-1881.215) -- 0:05:24
544000 -- (-1899.363) [-1874.901] (-1877.272) (-1875.299) * (-1880.778) [-1872.291] (-1897.470) (-1879.594) -- 0:05:24
545000 -- (-1886.101) (-1879.994) (-1893.004) [-1865.986] * (-1882.698) (-1895.503) (-1876.863) [-1872.373] -- 0:05:23
Average standard deviation of split frequencies: 0.011825
546000 -- (-1886.063) (-1879.252) (-1881.630) [-1874.948] * (-1865.170) (-1877.448) (-1880.202) [-1877.081] -- 0:05:22
547000 -- (-1887.453) [-1876.588] (-1897.438) (-1875.441) * (-1876.576) (-1883.166) (-1873.642) [-1865.973] -- 0:05:21
548000 -- (-1871.463) (-1879.800) (-1881.173) [-1864.098] * [-1875.769] (-1890.030) (-1901.683) (-1867.622) -- 0:05:20
549000 -- (-1877.288) (-1885.288) (-1877.894) [-1869.251] * (-1883.975) (-1884.217) (-1889.400) [-1869.313] -- 0:05:20
550000 -- (-1892.011) (-1875.482) [-1870.018] (-1889.860) * (-1883.494) [-1860.856] (-1900.234) (-1867.675) -- 0:05:19
Average standard deviation of split frequencies: 0.011464
551000 -- (-1881.989) (-1884.657) [-1875.200] (-1887.152) * [-1865.083] (-1875.546) (-1880.453) (-1871.704) -- 0:05:18
552000 -- (-1895.797) (-1882.729) (-1881.452) [-1888.472] * (-1868.099) [-1873.752] (-1879.596) (-1887.211) -- 0:05:17
553000 -- (-1896.193) [-1881.039] (-1882.913) (-1879.870) * (-1865.605) [-1863.872] (-1881.653) (-1884.520) -- 0:05:16
554000 -- (-1891.655) (-1872.333) [-1866.685] (-1890.334) * (-1871.411) [-1876.888] (-1875.734) (-1886.474) -- 0:05:15
555000 -- (-1901.815) (-1876.999) (-1873.840) [-1875.819] * (-1871.241) (-1884.269) [-1868.877] (-1880.430) -- 0:05:15
Average standard deviation of split frequencies: 0.011096
556000 -- (-1889.464) [-1871.427] (-1870.073) (-1866.365) * [-1879.734] (-1880.845) (-1865.777) (-1869.936) -- 0:05:14
557000 -- (-1881.084) (-1883.331) (-1895.394) [-1866.144] * (-1882.923) [-1866.625] (-1875.287) (-1884.472) -- 0:05:14
558000 -- (-1897.231) [-1873.817] (-1910.331) (-1876.556) * [-1878.406] (-1881.786) (-1884.669) (-1874.820) -- 0:05:12
559000 -- (-1871.522) (-1901.668) (-1869.050) [-1866.942] * (-1883.934) (-1887.403) (-1889.710) [-1875.831] -- 0:05:12
560000 -- [-1870.935] (-1891.879) (-1887.596) (-1868.834) * [-1883.744] (-1873.809) (-1886.608) (-1895.359) -- 0:05:11
Average standard deviation of split frequencies: 0.010163
561000 -- (-1878.235) (-1897.711) [-1882.664] (-1880.617) * (-1873.236) (-1873.888) (-1896.147) [-1876.850] -- 0:05:10
562000 -- (-1877.434) (-1893.634) [-1875.153] (-1882.240) * [-1882.290] (-1890.533) (-1882.487) (-1886.982) -- 0:05:10
563000 -- (-1878.300) [-1869.115] (-1881.400) (-1871.457) * (-1884.316) (-1905.762) [-1867.896] (-1886.149) -- 0:05:09
564000 -- [-1870.956] (-1875.981) (-1896.377) (-1874.378) * [-1883.374] (-1889.525) (-1861.218) (-1869.884) -- 0:05:09
565000 -- [-1875.487] (-1891.219) (-1908.657) (-1894.529) * (-1903.251) (-1880.697) [-1865.192] (-1876.106) -- 0:05:08
Average standard deviation of split frequencies: 0.010465
566000 -- [-1869.141] (-1878.127) (-1890.130) (-1895.023) * (-1878.148) [-1875.867] (-1865.139) (-1884.018) -- 0:05:07
567000 -- [-1872.712] (-1886.360) (-1883.279) (-1878.192) * (-1881.266) (-1873.689) [-1870.238] (-1874.536) -- 0:05:06
568000 -- (-1892.966) [-1882.155] (-1904.033) (-1889.238) * [-1871.542] (-1885.563) (-1882.028) (-1872.699) -- 0:05:06
569000 -- (-1887.981) (-1877.903) (-1878.216) [-1879.122] * (-1889.850) [-1870.401] (-1873.755) (-1886.324) -- 0:05:05
570000 -- (-1884.450) [-1868.105] (-1883.053) (-1876.405) * (-1870.785) [-1873.590] (-1892.311) (-1880.728) -- 0:05:04
Average standard deviation of split frequencies: 0.009877
571000 -- (-1892.762) (-1882.415) (-1892.604) [-1875.256] * (-1879.810) (-1874.075) (-1884.495) [-1864.547] -- 0:05:04
572000 -- (-1887.948) (-1874.058) (-1881.587) [-1873.387] * (-1890.096) (-1872.070) (-1874.146) [-1869.811] -- 0:05:03
573000 -- (-1892.059) [-1869.510] (-1878.188) (-1861.492) * (-1895.368) [-1870.802] (-1879.917) (-1871.842) -- 0:05:02
574000 -- (-1877.454) (-1879.066) (-1884.239) [-1867.899] * [-1893.582] (-1886.896) (-1885.693) (-1860.008) -- 0:05:01
575000 -- (-1875.878) [-1875.360] (-1883.010) (-1884.092) * (-1899.044) (-1878.791) (-1902.198) [-1876.298] -- 0:05:00
Average standard deviation of split frequencies: 0.009999
576000 -- (-1895.126) [-1871.376] (-1877.518) (-1887.975) * (-1891.482) [-1882.906] (-1893.863) (-1876.230) -- 0:04:59
577000 -- (-1894.477) (-1868.418) (-1879.516) [-1883.470] * (-1879.532) (-1900.323) (-1886.809) [-1872.818] -- 0:04:59
578000 -- (-1890.899) (-1868.352) [-1872.749] (-1890.265) * (-1882.605) (-1883.866) (-1884.939) [-1884.773] -- 0:04:57
579000 -- (-1879.262) [-1869.956] (-1876.596) (-1895.164) * (-1864.471) [-1879.957] (-1884.979) (-1884.832) -- 0:04:57
580000 -- (-1883.856) (-1891.825) [-1877.392] (-1882.336) * [-1880.136] (-1880.031) (-1894.740) (-1873.625) -- 0:04:56
Average standard deviation of split frequencies: 0.010236
581000 -- (-1879.040) (-1891.685) (-1891.998) [-1880.293] * (-1890.079) (-1898.566) (-1892.477) [-1870.769] -- 0:04:55
582000 -- (-1885.137) (-1880.537) (-1870.494) [-1870.446] * (-1883.372) (-1898.909) (-1889.373) [-1870.012] -- 0:04:54
583000 -- (-1864.320) [-1861.586] (-1878.705) (-1884.328) * (-1874.579) (-1893.870) (-1880.323) [-1870.492] -- 0:04:53
584000 -- (-1873.332) (-1874.198) (-1888.122) [-1879.664] * (-1885.652) (-1889.130) (-1892.489) [-1868.389] -- 0:04:53
585000 -- [-1881.450] (-1880.388) (-1887.086) (-1879.745) * (-1873.734) (-1879.481) (-1880.241) [-1862.926] -- 0:04:52
Average standard deviation of split frequencies: 0.010563
586000 -- (-1894.541) (-1870.941) (-1873.525) [-1874.567] * (-1872.434) (-1890.163) [-1872.317] (-1878.855) -- 0:04:51
587000 -- (-1891.636) (-1876.032) (-1885.181) [-1858.526] * (-1876.788) [-1869.232] (-1864.560) (-1888.161) -- 0:04:51
588000 -- (-1901.572) [-1870.409] (-1892.323) (-1871.642) * (-1881.097) [-1883.576] (-1873.544) (-1881.045) -- 0:04:50
589000 -- (-1899.067) (-1863.307) (-1881.355) [-1866.192] * (-1881.599) (-1875.592) [-1873.683] (-1876.794) -- 0:04:50
590000 -- (-1894.117) [-1867.293] (-1881.440) (-1876.724) * (-1894.475) [-1876.106] (-1897.495) (-1873.243) -- 0:04:49
Average standard deviation of split frequencies: 0.010549
591000 -- [-1883.823] (-1896.361) (-1868.185) (-1884.205) * (-1889.766) (-1878.723) (-1894.661) [-1870.295] -- 0:04:48
592000 -- (-1886.392) (-1894.283) [-1868.755] (-1883.184) * (-1876.384) (-1881.679) (-1894.421) [-1867.512] -- 0:04:48
593000 -- [-1863.400] (-1880.472) (-1886.058) (-1888.639) * (-1878.889) (-1883.943) (-1896.603) [-1869.614] -- 0:04:47
594000 -- [-1876.488] (-1882.223) (-1890.506) (-1878.383) * (-1904.773) [-1875.899] (-1896.430) (-1876.695) -- 0:04:46
595000 -- (-1884.614) [-1875.001] (-1888.680) (-1873.776) * (-1895.138) [-1876.969] (-1891.560) (-1877.235) -- 0:04:45
Average standard deviation of split frequencies: 0.010661
596000 -- (-1879.161) (-1899.663) [-1876.070] (-1890.021) * (-1896.236) [-1864.185] (-1876.325) (-1879.715) -- 0:04:45
597000 -- (-1891.879) [-1863.734] (-1888.844) (-1876.934) * (-1893.445) [-1863.255] (-1874.882) (-1874.781) -- 0:04:44
598000 -- (-1893.575) (-1872.955) (-1901.237) [-1869.212] * (-1874.714) (-1872.957) [-1860.943] (-1886.603) -- 0:04:43
599000 -- (-1890.719) (-1871.050) (-1900.644) [-1868.693] * (-1890.701) [-1874.891] (-1875.644) (-1889.191) -- 0:04:43
600000 -- (-1878.127) (-1867.461) (-1882.264) [-1873.624] * (-1899.828) (-1861.930) [-1872.386] (-1872.801) -- 0:04:42
Average standard deviation of split frequencies: 0.010612
601000 -- (-1869.931) (-1890.465) [-1869.440] (-1883.948) * [-1874.924] (-1876.533) (-1879.812) (-1880.484) -- 0:04:42
602000 -- [-1871.412] (-1883.621) (-1880.162) (-1874.091) * (-1873.636) [-1867.656] (-1895.465) (-1878.277) -- 0:04:40
603000 -- (-1881.578) (-1884.927) (-1899.181) [-1875.265] * (-1872.628) [-1876.410] (-1904.311) (-1872.684) -- 0:04:40
604000 -- [-1872.282] (-1871.030) (-1916.771) (-1879.480) * [-1871.968] (-1885.258) (-1877.585) (-1884.465) -- 0:04:39
605000 -- [-1872.780] (-1876.216) (-1901.380) (-1876.070) * [-1879.514] (-1882.908) (-1888.070) (-1908.737) -- 0:04:39
Average standard deviation of split frequencies: 0.010586
606000 -- (-1876.139) (-1883.649) (-1865.949) [-1870.345] * [-1883.400] (-1873.798) (-1871.373) (-1896.095) -- 0:04:38
607000 -- (-1869.306) (-1901.906) (-1875.627) [-1871.916] * [-1879.163] (-1871.511) (-1871.664) (-1893.504) -- 0:04:37
608000 -- (-1877.524) [-1873.155] (-1876.180) (-1872.199) * (-1890.183) (-1875.164) (-1864.253) [-1881.362] -- 0:04:37
609000 -- (-1900.002) (-1868.568) (-1874.413) [-1871.691] * [-1876.215] (-1879.654) (-1867.304) (-1894.811) -- 0:04:36
610000 -- (-1881.475) [-1870.265] (-1874.252) (-1871.848) * (-1871.528) [-1874.993] (-1868.870) (-1897.254) -- 0:04:35
Average standard deviation of split frequencies: 0.010203
611000 -- (-1893.595) (-1868.452) [-1870.425] (-1883.344) * (-1878.226) (-1890.040) [-1869.558] (-1888.921) -- 0:04:34
612000 -- [-1881.015] (-1868.960) (-1886.342) (-1880.688) * [-1867.478] (-1867.452) (-1876.827) (-1895.059) -- 0:04:33
613000 -- (-1884.323) (-1882.463) [-1872.016] (-1899.281) * (-1869.711) [-1860.852] (-1877.938) (-1893.868) -- 0:04:32
614000 -- [-1873.682] (-1890.506) (-1890.184) (-1907.869) * (-1878.450) [-1863.706] (-1868.513) (-1890.372) -- 0:04:32
615000 -- [-1873.933] (-1876.158) (-1889.693) (-1899.504) * (-1891.332) [-1880.809] (-1880.992) (-1880.827) -- 0:04:31
Average standard deviation of split frequencies: 0.010281
616000 -- [-1871.750] (-1899.965) (-1885.873) (-1878.077) * (-1897.627) [-1881.544] (-1869.145) (-1881.892) -- 0:04:31
617000 -- (-1879.696) (-1899.035) [-1873.360] (-1886.443) * (-1885.719) (-1881.154) [-1875.375] (-1878.071) -- 0:04:30
618000 -- (-1869.334) (-1896.998) (-1892.358) [-1877.411] * (-1901.525) [-1879.224] (-1888.716) (-1881.358) -- 0:04:29
619000 -- (-1867.269) (-1884.498) (-1889.919) [-1867.935] * [-1874.018] (-1879.087) (-1894.869) (-1883.466) -- 0:04:28
620000 -- (-1888.907) (-1877.683) (-1891.297) [-1863.546] * [-1869.023] (-1891.156) (-1896.283) (-1895.834) -- 0:04:28
Average standard deviation of split frequencies: 0.010732
621000 -- (-1887.800) (-1887.431) [-1874.952] (-1866.591) * (-1872.448) (-1897.594) (-1877.070) [-1876.805] -- 0:04:27
622000 -- (-1896.791) (-1908.726) (-1901.782) [-1877.164] * (-1866.741) [-1884.588] (-1896.548) (-1881.769) -- 0:04:26
623000 -- (-1902.951) (-1898.383) (-1886.194) [-1890.387] * (-1893.822) (-1891.748) [-1886.271] (-1875.207) -- 0:04:26
624000 -- [-1880.584] (-1888.973) (-1881.259) (-1880.840) * [-1876.884] (-1888.983) (-1896.013) (-1876.903) -- 0:04:25
625000 -- [-1864.018] (-1878.764) (-1890.299) (-1873.476) * (-1873.556) [-1865.241] (-1905.379) (-1886.248) -- 0:04:24
Average standard deviation of split frequencies: 0.011296
626000 -- [-1879.794] (-1876.975) (-1883.929) (-1896.028) * (-1891.107) (-1881.541) (-1889.076) [-1880.381] -- 0:04:24
627000 -- [-1869.934] (-1883.230) (-1888.757) (-1894.157) * [-1871.353] (-1874.009) (-1890.922) (-1894.580) -- 0:04:23
628000 -- [-1856.458] (-1888.165) (-1885.868) (-1878.889) * [-1881.567] (-1869.247) (-1891.031) (-1886.012) -- 0:04:23
629000 -- [-1884.710] (-1898.672) (-1875.059) (-1872.169) * (-1876.606) [-1869.158] (-1870.740) (-1882.143) -- 0:04:21
630000 -- [-1870.402] (-1877.777) (-1888.777) (-1876.155) * (-1892.005) [-1870.813] (-1878.684) (-1884.956) -- 0:04:21
Average standard deviation of split frequencies: 0.011765
631000 -- [-1885.767] (-1868.332) (-1888.731) (-1889.981) * (-1892.465) (-1881.491) (-1889.047) [-1881.575] -- 0:04:20
632000 -- (-1877.437) (-1873.383) [-1871.968] (-1895.794) * (-1895.861) (-1868.191) (-1887.117) [-1872.382] -- 0:04:19
633000 -- (-1891.429) (-1882.033) [-1872.290] (-1885.441) * (-1913.614) [-1866.489] (-1897.474) (-1874.541) -- 0:04:19
634000 -- (-1884.143) (-1873.018) [-1872.350] (-1899.953) * (-1918.476) (-1875.608) (-1883.693) [-1865.262] -- 0:04:18
635000 -- (-1896.249) (-1883.317) (-1880.097) [-1889.185] * (-1887.554) (-1881.692) (-1894.425) [-1871.561] -- 0:04:18
Average standard deviation of split frequencies: 0.010989
636000 -- [-1877.214] (-1887.431) (-1885.633) (-1887.591) * (-1870.955) (-1880.198) (-1883.900) [-1874.650] -- 0:04:16
637000 -- (-1884.804) [-1878.255] (-1887.460) (-1896.845) * (-1867.528) [-1876.945] (-1893.776) (-1866.786) -- 0:04:16
638000 -- (-1877.989) [-1873.592] (-1870.917) (-1881.721) * (-1894.994) [-1870.810] (-1890.672) (-1890.442) -- 0:04:15
639000 -- (-1873.352) [-1871.484] (-1872.922) (-1888.348) * (-1890.822) [-1866.345] (-1882.335) (-1900.324) -- 0:04:15
640000 -- (-1875.350) [-1873.629] (-1877.511) (-1897.771) * (-1873.756) (-1887.370) [-1878.180] (-1878.511) -- 0:04:14
Average standard deviation of split frequencies: 0.010237
641000 -- (-1877.124) (-1874.122) [-1872.797] (-1890.089) * (-1878.612) (-1889.314) (-1879.503) [-1869.692] -- 0:04:13
642000 -- [-1878.187] (-1877.865) (-1879.389) (-1881.327) * (-1908.711) (-1887.287) (-1872.808) [-1873.980] -- 0:04:13
643000 -- (-1875.300) [-1872.028] (-1866.695) (-1895.437) * (-1893.124) (-1878.794) (-1877.628) [-1881.702] -- 0:04:12
644000 -- [-1879.505] (-1887.404) (-1872.998) (-1887.566) * (-1900.341) [-1868.423] (-1867.276) (-1877.675) -- 0:04:11
645000 -- (-1873.036) (-1879.161) [-1866.668] (-1895.064) * (-1881.501) [-1878.131] (-1893.856) (-1886.887) -- 0:04:10
Average standard deviation of split frequencies: 0.010692
646000 -- (-1875.385) (-1887.119) [-1870.942] (-1901.842) * (-1886.744) [-1864.820] (-1901.175) (-1877.780) -- 0:04:10
647000 -- (-1877.595) (-1865.087) [-1869.292] (-1899.952) * (-1886.590) [-1869.728] (-1901.049) (-1882.427) -- 0:04:09
648000 -- (-1868.031) (-1874.919) [-1860.188] (-1904.450) * (-1874.123) [-1869.310] (-1897.775) (-1867.044) -- 0:04:08
649000 -- (-1880.722) [-1872.809] (-1879.800) (-1890.294) * [-1881.775] (-1884.730) (-1880.904) (-1869.553) -- 0:04:08
650000 -- (-1870.212) [-1873.611] (-1881.659) (-1886.198) * (-1874.218) [-1891.477] (-1876.659) (-1864.729) -- 0:04:07
Average standard deviation of split frequencies: 0.010867
651000 -- (-1880.989) (-1885.495) [-1873.336] (-1890.402) * [-1881.132] (-1874.889) (-1867.288) (-1873.418) -- 0:04:07
652000 -- (-1878.313) (-1881.921) [-1880.648] (-1885.093) * (-1887.276) [-1871.364] (-1882.169) (-1871.582) -- 0:04:06
653000 -- (-1881.172) (-1894.273) [-1865.797] (-1895.505) * (-1888.200) (-1884.665) [-1870.729] (-1878.876) -- 0:04:05
654000 -- (-1877.258) (-1875.141) [-1869.367] (-1891.080) * (-1897.964) (-1889.139) (-1865.054) [-1873.225] -- 0:04:04
655000 -- [-1882.561] (-1892.743) (-1876.843) (-1883.785) * (-1906.923) (-1872.607) (-1860.448) [-1866.438] -- 0:04:04
Average standard deviation of split frequencies: 0.010842
656000 -- [-1875.895] (-1899.173) (-1876.043) (-1893.888) * (-1886.537) (-1869.148) [-1872.383] (-1864.628) -- 0:04:03
657000 -- (-1873.680) (-1892.055) [-1877.454] (-1881.867) * [-1868.951] (-1869.889) (-1874.570) (-1871.554) -- 0:04:02
658000 -- (-1884.206) (-1893.532) (-1887.836) [-1879.132] * (-1866.902) (-1867.224) (-1884.007) [-1874.548] -- 0:04:01
659000 -- (-1876.532) (-1887.116) [-1870.285] (-1889.029) * [-1868.089] (-1885.829) (-1879.993) (-1885.102) -- 0:04:01
660000 -- (-1897.287) (-1869.813) [-1870.820] (-1887.587) * (-1866.449) (-1884.309) [-1864.694] (-1889.096) -- 0:04:00
Average standard deviation of split frequencies: 0.010920
661000 -- (-1872.077) [-1874.104] (-1881.323) (-1894.078) * (-1888.222) (-1888.433) [-1866.648] (-1880.496) -- 0:03:59
662000 -- (-1879.004) (-1884.951) [-1872.838] (-1873.929) * (-1883.643) (-1881.064) [-1882.346] (-1872.445) -- 0:03:58
663000 -- (-1877.697) (-1891.886) (-1871.605) [-1875.375] * (-1886.093) (-1874.069) (-1897.362) [-1871.340] -- 0:03:57
664000 -- [-1880.793] (-1878.893) (-1875.120) (-1895.376) * (-1892.161) [-1875.300] (-1883.267) (-1873.968) -- 0:03:57
665000 -- (-1885.127) (-1871.495) [-1881.383] (-1892.800) * (-1905.615) (-1890.157) (-1885.999) [-1869.184] -- 0:03:56
Average standard deviation of split frequencies: 0.009756
666000 -- (-1884.993) (-1870.564) [-1878.812] (-1883.196) * (-1899.912) (-1884.057) [-1866.068] (-1877.415) -- 0:03:55
667000 -- (-1873.228) (-1896.738) (-1879.234) [-1877.170] * (-1917.611) (-1873.944) (-1889.715) [-1874.377] -- 0:03:54
668000 -- [-1874.095] (-1897.468) (-1875.319) (-1883.853) * (-1893.088) (-1879.027) (-1883.690) [-1878.887] -- 0:03:54
669000 -- (-1872.339) (-1893.393) [-1875.786] (-1891.142) * (-1901.611) (-1880.149) (-1880.857) [-1880.377] -- 0:03:53
670000 -- (-1876.086) (-1896.947) [-1866.465] (-1890.288) * (-1883.815) (-1885.240) (-1894.033) [-1885.011] -- 0:03:52
Average standard deviation of split frequencies: 0.010054
671000 -- (-1872.339) (-1898.547) (-1862.095) [-1881.861] * (-1889.864) (-1885.093) (-1877.137) [-1871.685] -- 0:03:51
672000 -- (-1874.742) (-1891.424) (-1867.681) [-1868.103] * (-1891.330) [-1876.132] (-1875.746) (-1883.289) -- 0:03:50
673000 -- [-1869.300] (-1892.257) (-1878.956) (-1874.802) * [-1881.470] (-1879.155) (-1882.826) (-1879.217) -- 0:03:49
674000 -- (-1871.165) (-1873.929) [-1875.151] (-1868.813) * (-1869.994) (-1894.879) [-1871.529] (-1876.908) -- 0:03:49
675000 -- (-1877.361) (-1875.887) [-1870.984] (-1877.126) * (-1879.094) [-1882.176] (-1887.978) (-1883.475) -- 0:03:48
Average standard deviation of split frequencies: 0.009945
676000 -- (-1884.878) (-1879.062) (-1881.707) [-1876.860] * (-1893.548) (-1880.743) [-1892.207] (-1881.544) -- 0:03:47
677000 -- (-1893.565) (-1870.368) [-1879.586] (-1887.380) * (-1885.351) (-1880.884) [-1881.197] (-1887.811) -- 0:03:46
678000 -- (-1887.356) [-1881.357] (-1893.240) (-1878.084) * (-1875.040) [-1872.540] (-1899.775) (-1876.455) -- 0:03:46
679000 -- (-1876.717) [-1867.244] (-1883.612) (-1880.309) * (-1872.898) (-1872.286) (-1879.083) [-1869.532] -- 0:03:45
680000 -- (-1871.930) (-1890.900) [-1874.997] (-1885.005) * [-1866.734] (-1878.222) (-1875.710) (-1881.488) -- 0:03:44
Average standard deviation of split frequencies: 0.010298
681000 -- [-1869.575] (-1895.214) (-1872.631) (-1889.931) * [-1863.372] (-1867.883) (-1881.543) (-1892.818) -- 0:03:43
682000 -- [-1864.656] (-1874.640) (-1901.530) (-1873.377) * (-1871.576) (-1869.434) [-1874.128] (-1881.715) -- 0:03:42
683000 -- (-1885.963) [-1871.735] (-1891.324) (-1877.076) * [-1883.040] (-1868.136) (-1892.428) (-1910.529) -- 0:03:42
684000 -- (-1887.977) (-1884.424) (-1888.273) [-1871.808] * (-1877.677) [-1872.720] (-1887.680) (-1888.269) -- 0:03:41
685000 -- (-1877.020) (-1881.412) (-1870.412) [-1875.621] * [-1879.080] (-1875.872) (-1896.003) (-1881.787) -- 0:03:40
Average standard deviation of split frequencies: 0.010756
686000 -- [-1867.460] (-1879.819) (-1880.098) (-1873.670) * (-1872.478) [-1867.612] (-1892.022) (-1890.112) -- 0:03:39
687000 -- (-1897.613) [-1878.648] (-1885.142) (-1872.589) * (-1894.223) [-1872.478] (-1872.757) (-1884.856) -- 0:03:39
688000 -- (-1877.333) [-1872.676] (-1892.732) (-1884.963) * [-1886.355] (-1888.146) (-1888.043) (-1882.359) -- 0:03:38
689000 -- [-1865.623] (-1874.617) (-1901.322) (-1885.436) * (-1882.753) [-1876.676] (-1880.646) (-1888.699) -- 0:03:37
690000 -- [-1876.796] (-1882.290) (-1889.590) (-1899.914) * [-1876.915] (-1895.905) (-1880.616) (-1882.990) -- 0:03:36
Average standard deviation of split frequencies: 0.010357
691000 -- (-1882.767) [-1877.169] (-1900.563) (-1902.184) * [-1876.117] (-1908.077) (-1865.657) (-1874.405) -- 0:03:35
692000 -- (-1880.894) (-1893.829) [-1884.857] (-1891.883) * (-1871.968) (-1906.081) [-1867.567] (-1880.338) -- 0:03:34
693000 -- (-1877.192) (-1858.763) (-1887.206) [-1873.213] * (-1878.064) (-1892.185) [-1880.886] (-1892.024) -- 0:03:34
694000 -- (-1888.112) [-1864.100] (-1888.201) (-1885.580) * [-1876.650] (-1889.982) (-1872.397) (-1887.265) -- 0:03:33
695000 -- (-1895.335) [-1874.415] (-1901.943) (-1872.252) * [-1871.668] (-1885.352) (-1877.221) (-1870.407) -- 0:03:32
Average standard deviation of split frequencies: 0.011072
696000 -- (-1888.770) [-1858.686] (-1898.598) (-1869.876) * (-1879.607) (-1876.642) [-1867.260] (-1888.410) -- 0:03:31
697000 -- (-1883.077) (-1877.390) (-1888.569) [-1879.949] * (-1908.079) (-1888.323) [-1872.767] (-1875.926) -- 0:03:31
698000 -- (-1878.460) (-1867.486) (-1886.097) [-1880.537] * (-1882.803) (-1879.597) (-1878.303) [-1884.250] -- 0:03:30
699000 -- (-1870.927) (-1866.410) [-1881.816] (-1894.943) * (-1876.047) (-1872.173) [-1870.192] (-1869.786) -- 0:03:29
700000 -- (-1884.111) (-1867.784) [-1882.233] (-1892.406) * (-1880.379) (-1874.593) (-1871.177) [-1864.310] -- 0:03:29
Average standard deviation of split frequencies: 0.011233
701000 -- (-1872.002) [-1872.402] (-1885.747) (-1890.804) * [-1877.886] (-1903.591) (-1877.566) (-1873.168) -- 0:03:28
702000 -- [-1882.557] (-1882.211) (-1895.568) (-1875.747) * [-1879.866] (-1887.584) (-1880.059) (-1880.175) -- 0:03:28
703000 -- (-1892.535) (-1875.754) (-1882.331) [-1866.246] * [-1880.822] (-1912.932) (-1887.789) (-1901.586) -- 0:03:27
704000 -- (-1878.090) [-1872.220] (-1881.009) (-1866.886) * [-1876.597] (-1897.436) (-1887.534) (-1887.701) -- 0:03:26
705000 -- (-1887.611) [-1877.780] (-1886.569) (-1871.260) * (-1872.907) (-1885.724) (-1878.391) [-1874.740] -- 0:03:25
Average standard deviation of split frequencies: 0.011293
706000 -- (-1885.480) (-1898.641) (-1871.496) [-1877.595] * (-1874.506) (-1889.468) (-1886.004) [-1874.445] -- 0:03:25
707000 -- (-1902.987) (-1878.061) (-1887.084) [-1881.722] * (-1874.728) (-1891.114) (-1870.658) [-1874.180] -- 0:03:24
708000 -- (-1885.205) [-1874.611] (-1871.972) (-1886.102) * (-1879.917) [-1872.117] (-1880.276) (-1884.350) -- 0:03:23
709000 -- (-1892.054) [-1870.230] (-1886.552) (-1882.171) * (-1888.576) [-1864.092] (-1887.780) (-1871.325) -- 0:03:23
710000 -- (-1879.359) (-1871.586) (-1891.045) [-1878.316] * (-1882.850) (-1874.054) (-1890.338) [-1863.917] -- 0:03:22
Average standard deviation of split frequencies: 0.010584
711000 -- (-1902.597) (-1878.446) (-1880.306) [-1872.636] * (-1876.283) (-1863.636) (-1880.037) [-1869.965] -- 0:03:21
712000 -- (-1880.578) (-1878.079) [-1884.942] (-1882.699) * (-1874.180) [-1876.880] (-1894.630) (-1881.939) -- 0:03:21
713000 -- [-1881.288] (-1916.603) (-1885.094) (-1883.584) * (-1891.195) [-1867.036] (-1886.821) (-1888.854) -- 0:03:20
714000 -- [-1875.418] (-1913.903) (-1891.039) (-1879.035) * (-1890.519) (-1890.028) (-1881.382) [-1876.698] -- 0:03:19
715000 -- (-1873.378) (-1902.274) (-1902.479) [-1878.222] * (-1888.717) (-1884.779) [-1882.316] (-1873.791) -- 0:03:18
Average standard deviation of split frequencies: 0.009590
716000 -- (-1881.631) (-1918.497) [-1876.596] (-1878.490) * (-1886.575) (-1867.792) (-1874.978) [-1873.157] -- 0:03:17
717000 -- (-1888.151) (-1889.161) (-1885.350) [-1878.307] * (-1884.041) [-1870.702] (-1883.214) (-1875.637) -- 0:03:17
718000 -- (-1870.969) (-1887.835) (-1887.879) [-1872.352] * (-1869.795) (-1875.791) [-1872.509] (-1872.187) -- 0:03:16
719000 -- (-1875.736) (-1880.595) [-1880.098] (-1878.528) * (-1869.652) (-1882.771) (-1885.805) [-1872.514] -- 0:03:16
720000 -- (-1879.255) [-1883.710] (-1877.528) (-1894.351) * (-1877.723) (-1877.598) (-1875.549) [-1868.226] -- 0:03:15
Average standard deviation of split frequencies: 0.008930
721000 -- (-1873.403) (-1870.782) (-1880.953) [-1875.527] * [-1877.646] (-1886.451) (-1879.098) (-1869.484) -- 0:03:14
722000 -- [-1878.476] (-1875.144) (-1879.202) (-1886.472) * (-1882.266) (-1872.629) (-1876.765) [-1884.790] -- 0:03:14
723000 -- (-1885.232) [-1868.462] (-1884.777) (-1880.119) * (-1884.850) [-1875.996] (-1886.811) (-1888.370) -- 0:03:13
724000 -- (-1872.445) [-1882.654] (-1877.220) (-1880.125) * (-1875.646) [-1865.183] (-1890.829) (-1877.504) -- 0:03:12
725000 -- (-1874.295) [-1888.174] (-1880.487) (-1907.379) * [-1878.899] (-1879.348) (-1884.570) (-1884.711) -- 0:03:11
Average standard deviation of split frequencies: 0.008498
726000 -- (-1875.220) (-1887.688) [-1879.524] (-1880.282) * [-1881.888] (-1880.774) (-1877.924) (-1890.205) -- 0:03:11
727000 -- (-1873.843) (-1887.823) [-1877.238] (-1883.485) * [-1867.116] (-1876.278) (-1894.180) (-1886.820) -- 0:03:10
728000 -- (-1876.202) (-1886.977) (-1887.961) [-1863.252] * (-1880.825) [-1883.891] (-1892.887) (-1880.231) -- 0:03:09
729000 -- (-1877.034) (-1893.778) (-1880.091) [-1887.721] * (-1892.568) [-1878.577] (-1888.003) (-1885.855) -- 0:03:09
730000 -- (-1888.097) [-1874.843] (-1879.887) (-1901.233) * (-1893.893) [-1872.937] (-1892.483) (-1894.274) -- 0:03:08
Average standard deviation of split frequencies: 0.008107
731000 -- (-1907.247) [-1872.300] (-1868.668) (-1895.779) * (-1898.692) [-1881.704] (-1872.747) (-1903.310) -- 0:03:07
732000 -- (-1889.341) [-1880.476] (-1886.684) (-1899.021) * (-1879.939) [-1867.128] (-1892.976) (-1913.245) -- 0:03:07
733000 -- (-1881.831) [-1883.539] (-1881.250) (-1881.286) * (-1888.967) [-1862.841] (-1882.706) (-1887.331) -- 0:03:06
734000 -- [-1872.991] (-1881.643) (-1885.457) (-1892.406) * (-1900.078) (-1887.033) [-1875.204] (-1885.728) -- 0:03:05
735000 -- (-1900.100) (-1882.836) [-1878.352] (-1907.544) * (-1913.374) [-1872.250] (-1876.202) (-1877.383) -- 0:03:04
Average standard deviation of split frequencies: 0.008271
736000 -- (-1885.620) [-1884.128] (-1885.260) (-1892.321) * (-1887.846) [-1869.672] (-1868.908) (-1876.815) -- 0:03:04
737000 -- (-1891.728) [-1874.504] (-1888.015) (-1896.082) * [-1881.708] (-1867.751) (-1886.980) (-1882.733) -- 0:03:03
738000 -- (-1889.341) [-1875.324] (-1894.191) (-1899.242) * (-1901.967) [-1873.448] (-1882.086) (-1878.824) -- 0:03:02
739000 -- (-1902.921) [-1867.912] (-1899.887) (-1882.179) * (-1923.033) [-1881.921] (-1889.760) (-1880.619) -- 0:03:02
740000 -- (-1909.418) [-1873.071] (-1897.754) (-1865.873) * (-1891.848) [-1865.912] (-1885.708) (-1892.850) -- 0:03:01
Average standard deviation of split frequencies: 0.008053
741000 -- (-1900.113) (-1886.187) (-1899.444) [-1887.913] * (-1879.138) [-1866.565] (-1884.767) (-1885.098) -- 0:03:01
742000 -- (-1889.658) [-1867.896] (-1888.252) (-1876.357) * [-1878.394] (-1878.901) (-1882.129) (-1875.575) -- 0:03:00
743000 -- (-1884.359) (-1879.222) (-1901.263) [-1872.778] * [-1867.166] (-1890.350) (-1879.990) (-1892.412) -- 0:02:59
744000 -- (-1896.133) [-1870.174] (-1887.477) (-1879.623) * [-1885.080] (-1912.898) (-1891.211) (-1895.794) -- 0:02:58
745000 -- (-1886.637) (-1886.880) (-1880.527) [-1876.396] * [-1879.128] (-1902.506) (-1885.014) (-1894.929) -- 0:02:58
Average standard deviation of split frequencies: 0.008050
746000 -- (-1890.297) [-1872.472] (-1883.747) (-1878.156) * (-1881.704) (-1885.977) [-1886.039] (-1887.944) -- 0:02:57
747000 -- (-1882.771) (-1878.739) [-1878.773] (-1895.141) * [-1873.517] (-1911.561) (-1878.656) (-1873.199) -- 0:02:56
748000 -- [-1880.271] (-1890.595) (-1880.945) (-1896.296) * [-1859.818] (-1889.748) (-1881.038) (-1871.578) -- 0:02:55
749000 -- (-1880.200) (-1877.978) [-1874.310] (-1887.733) * [-1865.529] (-1888.130) (-1883.043) (-1879.026) -- 0:02:55
750000 -- (-1872.998) (-1882.125) (-1880.966) [-1873.655] * [-1870.412] (-1875.596) (-1876.370) (-1872.195) -- 0:02:54
Average standard deviation of split frequencies: 0.008355
751000 -- [-1876.440] (-1878.292) (-1903.002) (-1895.989) * (-1868.293) [-1871.317] (-1874.251) (-1875.975) -- 0:02:54
752000 -- (-1870.102) (-1880.129) (-1881.116) [-1875.257] * (-1878.519) (-1873.139) (-1883.599) [-1875.520] -- 0:02:53
753000 -- [-1865.949] (-1889.707) (-1887.064) (-1885.108) * (-1877.156) (-1889.451) [-1872.847] (-1878.635) -- 0:02:52
754000 -- [-1861.851] (-1889.368) (-1885.421) (-1881.762) * (-1879.638) [-1878.303] (-1867.683) (-1887.976) -- 0:02:51
755000 -- (-1872.302) [-1879.864] (-1883.088) (-1876.165) * (-1882.222) [-1877.219] (-1886.420) (-1901.716) -- 0:02:51
Average standard deviation of split frequencies: 0.008269
756000 -- (-1890.097) [-1879.228] (-1879.192) (-1881.894) * [-1882.070] (-1874.889) (-1879.797) (-1895.006) -- 0:02:50
757000 -- (-1888.282) (-1871.082) (-1890.510) [-1874.049] * (-1874.854) (-1878.415) [-1868.721] (-1905.631) -- 0:02:49
758000 -- (-1877.915) (-1880.157) [-1877.257] (-1877.863) * (-1889.416) (-1868.522) [-1869.793] (-1872.816) -- 0:02:49
759000 -- (-1891.190) [-1877.296] (-1882.919) (-1874.506) * (-1873.381) [-1881.054] (-1879.572) (-1877.015) -- 0:02:48
760000 -- (-1898.444) (-1867.984) [-1874.188] (-1875.790) * (-1864.635) (-1874.726) (-1886.038) [-1877.745] -- 0:02:47
Average standard deviation of split frequencies: 0.008003
761000 -- (-1876.413) (-1879.849) [-1877.843] (-1879.281) * [-1891.150] (-1883.201) (-1879.189) (-1879.432) -- 0:02:46
762000 -- (-1878.574) (-1887.245) (-1881.062) [-1880.832] * (-1888.747) (-1897.135) [-1881.471] (-1885.214) -- 0:02:46
763000 -- [-1869.595] (-1887.214) (-1884.765) (-1899.878) * (-1886.871) [-1878.426] (-1898.239) (-1889.146) -- 0:02:45
764000 -- [-1883.973] (-1879.427) (-1873.507) (-1907.036) * (-1886.895) [-1873.233] (-1875.086) (-1902.496) -- 0:02:44
765000 -- (-1876.610) (-1879.584) [-1867.475] (-1886.368) * (-1892.753) [-1870.117] (-1887.053) (-1882.508) -- 0:02:43
Average standard deviation of split frequencies: 0.008214
766000 -- (-1886.497) (-1889.722) (-1883.357) [-1890.166] * (-1883.071) [-1869.131] (-1878.888) (-1890.971) -- 0:02:43
767000 -- [-1866.919] (-1885.733) (-1878.790) (-1876.826) * (-1889.257) (-1871.222) (-1886.503) [-1865.399] -- 0:02:42
768000 -- (-1883.626) [-1864.675] (-1875.547) (-1879.007) * (-1895.367) [-1868.575] (-1875.253) (-1884.829) -- 0:02:41
769000 -- (-1887.789) (-1871.672) [-1872.711] (-1885.163) * (-1881.395) [-1882.370] (-1887.584) (-1883.012) -- 0:02:40
770000 -- (-1883.678) [-1870.655] (-1887.870) (-1883.734) * (-1872.209) (-1892.029) (-1872.834) [-1872.337] -- 0:02:40
Average standard deviation of split frequencies: 0.008750
771000 -- [-1867.250] (-1877.117) (-1889.282) (-1871.982) * (-1884.363) (-1883.062) [-1873.581] (-1874.641) -- 0:02:39
772000 -- [-1866.496] (-1878.816) (-1891.047) (-1882.324) * [-1875.894] (-1883.377) (-1880.640) (-1875.227) -- 0:02:38
773000 -- (-1875.980) (-1884.672) (-1880.552) [-1874.176] * (-1867.486) [-1869.800] (-1872.816) (-1884.406) -- 0:02:37
774000 -- [-1878.583] (-1885.493) (-1888.443) (-1882.007) * (-1861.994) (-1879.434) [-1875.176] (-1890.177) -- 0:02:37
775000 -- [-1867.154] (-1887.023) (-1870.459) (-1882.159) * [-1867.708] (-1879.326) (-1887.595) (-1883.858) -- 0:02:36
Average standard deviation of split frequencies: 0.008452
776000 -- [-1883.992] (-1877.424) (-1872.466) (-1881.319) * (-1874.659) (-1892.673) [-1892.734] (-1876.606) -- 0:02:35
777000 -- (-1870.401) [-1877.596] (-1890.130) (-1883.956) * (-1872.056) (-1885.864) (-1878.682) [-1875.157] -- 0:02:34
778000 -- (-1873.570) (-1874.118) [-1869.044] (-1872.554) * (-1878.303) (-1872.739) (-1878.349) [-1864.339] -- 0:02:34
779000 -- (-1878.862) (-1882.428) [-1863.155] (-1879.786) * (-1889.515) (-1874.991) [-1878.729] (-1875.566) -- 0:02:33
780000 -- (-1885.243) (-1890.938) [-1871.915] (-1900.726) * (-1882.538) (-1890.135) [-1877.495] (-1891.143) -- 0:02:32
Average standard deviation of split frequencies: 0.008900
781000 -- (-1888.015) (-1899.112) (-1876.137) [-1880.409] * (-1870.635) (-1882.597) [-1877.769] (-1889.274) -- 0:02:31
782000 -- (-1882.321) (-1898.181) (-1880.589) [-1884.738] * (-1869.095) [-1864.096] (-1869.348) (-1895.778) -- 0:02:31
783000 -- (-1878.318) (-1890.058) (-1892.787) [-1879.048] * [-1868.493] (-1889.005) (-1872.257) (-1886.001) -- 0:02:30
784000 -- [-1875.351] (-1885.391) (-1883.557) (-1880.168) * [-1864.540] (-1878.608) (-1871.149) (-1880.914) -- 0:02:29
785000 -- [-1869.589] (-1869.473) (-1895.558) (-1884.697) * (-1876.482) [-1869.589] (-1868.895) (-1871.899) -- 0:02:28
Average standard deviation of split frequencies: 0.009074
786000 -- (-1864.828) (-1886.120) [-1880.771] (-1888.016) * (-1876.198) [-1871.395] (-1879.540) (-1883.080) -- 0:02:28
787000 -- (-1870.887) [-1868.135] (-1881.532) (-1877.321) * [-1874.925] (-1890.092) (-1874.680) (-1874.681) -- 0:02:27
788000 -- (-1881.184) [-1871.619] (-1869.200) (-1878.709) * [-1869.123] (-1893.431) (-1877.755) (-1869.618) -- 0:02:27
789000 -- (-1875.811) (-1879.854) (-1898.564) [-1881.267] * (-1864.871) [-1880.456] (-1895.301) (-1875.157) -- 0:02:26
790000 -- (-1877.738) [-1874.373] (-1882.485) (-1885.730) * [-1870.121] (-1876.342) (-1890.585) (-1866.511) -- 0:02:25
Average standard deviation of split frequencies: 0.008632
791000 -- (-1887.376) (-1882.728) (-1879.897) [-1882.935] * (-1870.012) [-1877.962] (-1883.194) (-1871.256) -- 0:02:25
792000 -- [-1876.400] (-1876.244) (-1882.674) (-1895.732) * (-1864.133) (-1897.408) (-1877.331) [-1873.429] -- 0:02:24
793000 -- (-1887.263) (-1883.994) [-1870.127] (-1880.574) * (-1878.835) (-1888.429) (-1882.596) [-1870.875] -- 0:02:23
794000 -- (-1885.300) (-1879.125) [-1864.577] (-1886.714) * (-1882.862) (-1884.507) (-1881.488) [-1871.921] -- 0:02:22
795000 -- [-1874.368] (-1874.789) (-1889.049) (-1886.420) * (-1886.573) (-1899.003) (-1881.967) [-1878.496] -- 0:02:22
Average standard deviation of split frequencies: 0.008677
796000 -- [-1867.256] (-1876.816) (-1869.659) (-1896.327) * (-1864.802) (-1893.995) (-1862.534) [-1871.068] -- 0:02:21
797000 -- (-1876.749) (-1876.413) (-1890.505) [-1890.415] * [-1865.257] (-1882.299) (-1872.249) (-1872.799) -- 0:02:20
798000 -- [-1866.720] (-1893.613) (-1887.638) (-1888.968) * (-1864.128) (-1893.550) (-1874.981) [-1871.048] -- 0:02:20
799000 -- [-1862.866] (-1878.438) (-1889.216) (-1901.870) * [-1871.497] (-1893.403) (-1872.741) (-1871.461) -- 0:02:19
800000 -- (-1867.563) [-1877.401] (-1902.416) (-1880.792) * (-1879.810) (-1899.248) [-1878.402] (-1884.333) -- 0:02:18
Average standard deviation of split frequencies: 0.008652
801000 -- [-1873.626] (-1892.523) (-1886.191) (-1885.848) * [-1881.114] (-1918.682) (-1876.763) (-1925.242) -- 0:02:18
802000 -- [-1865.439] (-1891.340) (-1886.191) (-1871.634) * (-1870.405) (-1882.244) [-1871.641] (-1900.314) -- 0:02:17
803000 -- [-1867.065] (-1898.099) (-1890.384) (-1880.882) * [-1866.527] (-1873.683) (-1869.526) (-1868.926) -- 0:02:16
804000 -- [-1869.161] (-1890.326) (-1890.387) (-1884.870) * (-1871.826) (-1868.835) [-1874.471] (-1880.278) -- 0:02:16
805000 -- (-1884.861) [-1879.319] (-1896.819) (-1868.740) * (-1878.375) [-1868.211] (-1890.708) (-1876.409) -- 0:02:15
Average standard deviation of split frequencies: 0.009129
806000 -- (-1867.195) (-1885.949) [-1870.786] (-1881.004) * (-1886.917) [-1878.862] (-1865.260) (-1896.147) -- 0:02:14
807000 -- (-1873.564) (-1907.213) (-1868.291) [-1866.057] * (-1877.087) (-1890.522) [-1874.181] (-1892.369) -- 0:02:14
808000 -- (-1885.135) (-1889.853) [-1865.574] (-1885.004) * (-1880.840) (-1891.826) (-1859.544) [-1877.151] -- 0:02:13
809000 -- (-1886.177) (-1874.266) (-1891.017) [-1868.826] * (-1872.404) [-1883.492] (-1888.083) (-1886.855) -- 0:02:12
810000 -- (-1888.711) (-1878.661) (-1889.914) [-1865.848] * [-1875.066] (-1880.576) (-1872.108) (-1887.222) -- 0:02:12
Average standard deviation of split frequencies: 0.008798
811000 -- (-1876.533) (-1886.740) (-1883.501) [-1882.086] * (-1871.412) [-1870.435] (-1885.037) (-1880.900) -- 0:02:11
812000 -- (-1876.206) (-1892.470) [-1878.728] (-1873.050) * (-1869.871) (-1879.140) [-1878.961] (-1887.979) -- 0:02:10
813000 -- [-1876.146] (-1904.598) (-1877.235) (-1876.966) * [-1871.499] (-1887.266) (-1876.509) (-1883.293) -- 0:02:09
814000 -- (-1889.447) (-1894.209) [-1874.044] (-1882.197) * (-1863.307) (-1873.228) (-1885.228) [-1879.841] -- 0:02:09
815000 -- [-1871.983] (-1890.908) (-1878.097) (-1885.435) * [-1875.291] (-1869.793) (-1872.681) (-1881.336) -- 0:02:08
Average standard deviation of split frequencies: 0.009218
816000 -- (-1869.455) (-1877.175) [-1871.156] (-1874.526) * [-1867.174] (-1876.684) (-1875.342) (-1891.317) -- 0:02:07
817000 -- [-1874.208] (-1883.967) (-1883.899) (-1876.435) * (-1887.035) (-1887.220) (-1879.972) [-1869.706] -- 0:02:07
818000 -- (-1888.478) (-1889.071) [-1876.185] (-1884.375) * (-1905.718) (-1880.961) [-1864.904] (-1888.771) -- 0:02:06
819000 -- [-1880.744] (-1867.831) (-1889.790) (-1880.374) * (-1881.412) (-1900.151) (-1875.890) [-1874.699] -- 0:02:05
820000 -- (-1900.962) [-1874.080] (-1874.120) (-1878.019) * (-1883.251) (-1883.998) (-1892.038) [-1871.392] -- 0:02:05
Average standard deviation of split frequencies: 0.009216
821000 -- (-1902.322) (-1872.619) [-1874.201] (-1873.461) * (-1872.630) (-1903.867) (-1885.296) [-1857.646] -- 0:02:04
822000 -- (-1900.343) (-1877.606) [-1871.204] (-1888.329) * [-1877.483] (-1879.665) (-1873.056) (-1883.675) -- 0:02:03
823000 -- (-1898.199) (-1877.108) (-1865.546) [-1889.775] * [-1870.593] (-1868.662) (-1890.000) (-1884.956) -- 0:02:03
824000 -- (-1881.132) [-1871.263] (-1876.977) (-1877.621) * (-1888.051) [-1867.216] (-1885.129) (-1901.289) -- 0:02:02
825000 -- (-1889.129) (-1872.335) [-1882.226] (-1893.115) * (-1885.001) (-1868.165) [-1870.792] (-1906.238) -- 0:02:01
Average standard deviation of split frequencies: 0.009007
826000 -- [-1871.340] (-1875.066) (-1878.049) (-1894.733) * (-1885.976) [-1876.241] (-1880.485) (-1887.586) -- 0:02:00
827000 -- (-1878.014) (-1872.998) [-1872.625] (-1906.021) * (-1885.959) (-1881.516) (-1902.284) [-1883.707] -- 0:02:00
828000 -- (-1875.905) [-1873.932] (-1881.866) (-1895.653) * [-1881.165] (-1871.057) (-1899.030) (-1899.023) -- 0:01:59
829000 -- [-1863.724] (-1878.816) (-1893.927) (-1903.553) * (-1885.109) [-1871.540] (-1883.988) (-1902.834) -- 0:01:58
830000 -- (-1894.062) [-1880.229] (-1889.430) (-1874.390) * (-1886.342) [-1873.423] (-1878.901) (-1892.096) -- 0:01:58
Average standard deviation of split frequencies: 0.009425
831000 -- (-1890.137) (-1869.479) [-1877.728] (-1871.027) * (-1881.261) (-1872.423) [-1869.724] (-1903.779) -- 0:01:57
832000 -- (-1885.739) (-1873.624) (-1880.369) [-1876.542] * (-1878.707) [-1876.440] (-1892.987) (-1886.208) -- 0:01:56
833000 -- (-1880.096) [-1874.382] (-1900.481) (-1875.716) * (-1908.443) [-1882.576] (-1886.959) (-1886.558) -- 0:01:56
834000 -- [-1870.871] (-1876.162) (-1901.789) (-1890.083) * (-1884.822) (-1871.028) [-1867.847] (-1885.864) -- 0:01:55
835000 -- (-1876.296) (-1886.776) (-1891.654) [-1872.239] * (-1890.748) (-1876.378) (-1880.317) [-1885.595] -- 0:01:54
Average standard deviation of split frequencies: 0.009684
836000 -- (-1887.743) (-1899.615) (-1891.497) [-1870.516] * (-1891.968) [-1866.590] (-1871.011) (-1876.658) -- 0:01:54
837000 -- [-1886.042] (-1879.918) (-1886.852) (-1877.393) * (-1878.941) [-1872.534] (-1877.108) (-1889.206) -- 0:01:53
838000 -- (-1874.986) (-1876.587) [-1869.821] (-1883.336) * (-1867.350) [-1870.386] (-1873.615) (-1877.473) -- 0:01:52
839000 -- (-1879.110) [-1875.791] (-1908.032) (-1882.977) * (-1876.809) [-1879.951] (-1875.162) (-1887.611) -- 0:01:52
840000 -- [-1878.480] (-1875.274) (-1904.394) (-1884.424) * (-1879.940) (-1873.889) [-1865.562] (-1894.998) -- 0:01:51
Average standard deviation of split frequencies: 0.010020
841000 -- (-1889.804) [-1882.218] (-1892.274) (-1883.305) * (-1879.275) (-1864.717) (-1873.656) [-1866.452] -- 0:01:50
842000 -- (-1900.293) [-1875.994] (-1890.606) (-1889.585) * (-1891.446) (-1880.315) [-1867.902] (-1905.977) -- 0:01:49
843000 -- [-1862.626] (-1877.224) (-1882.842) (-1883.181) * (-1875.587) [-1870.916] (-1878.330) (-1888.367) -- 0:01:49
844000 -- [-1866.673] (-1894.903) (-1874.454) (-1884.340) * (-1865.019) (-1871.860) [-1867.692] (-1910.102) -- 0:01:48
845000 -- [-1874.120] (-1903.554) (-1874.395) (-1878.042) * (-1885.984) [-1880.568] (-1871.391) (-1883.377) -- 0:01:47
Average standard deviation of split frequencies: 0.010296
846000 -- (-1874.502) (-1877.891) [-1870.759] (-1888.213) * (-1882.943) (-1873.036) [-1858.178] (-1895.424) -- 0:01:47
847000 -- (-1870.834) (-1878.752) [-1867.400] (-1897.526) * (-1871.970) [-1867.178] (-1868.708) (-1872.296) -- 0:01:46
848000 -- (-1881.100) (-1879.906) (-1889.834) [-1869.853] * (-1871.386) [-1876.531] (-1866.626) (-1879.881) -- 0:01:45
849000 -- (-1880.766) [-1878.403] (-1881.544) (-1876.457) * (-1863.305) (-1880.641) [-1862.958] (-1880.445) -- 0:01:45
850000 -- (-1880.702) [-1877.027] (-1891.765) (-1870.465) * (-1874.430) (-1878.700) [-1882.442] (-1892.339) -- 0:01:44
Average standard deviation of split frequencies: 0.010577
851000 -- [-1863.362] (-1885.651) (-1887.443) (-1871.351) * [-1876.053] (-1889.638) (-1872.803) (-1870.360) -- 0:01:43
852000 -- (-1875.167) (-1877.191) (-1892.326) [-1859.459] * [-1879.018] (-1884.791) (-1877.232) (-1889.880) -- 0:01:43
853000 -- [-1859.911] (-1869.418) (-1908.171) (-1886.772) * (-1899.120) (-1893.690) [-1882.208] (-1860.398) -- 0:01:42
854000 -- [-1867.179] (-1874.746) (-1878.715) (-1913.498) * (-1878.425) (-1879.749) (-1877.997) [-1876.054] -- 0:01:41
855000 -- [-1874.803] (-1891.780) (-1875.095) (-1892.150) * (-1877.399) [-1876.251] (-1913.523) (-1887.958) -- 0:01:41
Average standard deviation of split frequencies: 0.010703
856000 -- [-1865.107] (-1878.688) (-1878.270) (-1899.225) * (-1867.526) (-1868.536) (-1893.234) [-1876.023] -- 0:01:40
857000 -- (-1867.033) (-1880.142) (-1856.733) [-1875.761] * [-1880.544] (-1897.559) (-1885.303) (-1876.263) -- 0:01:39
858000 -- (-1890.843) (-1874.977) (-1875.881) [-1879.286] * [-1876.211] (-1906.467) (-1889.757) (-1881.205) -- 0:01:38
859000 -- [-1878.054] (-1886.872) (-1876.516) (-1875.676) * (-1874.857) (-1902.429) [-1877.218] (-1871.250) -- 0:01:38
860000 -- (-1871.938) (-1883.283) [-1880.270] (-1897.836) * (-1880.386) (-1882.386) (-1884.800) [-1874.105] -- 0:01:37
Average standard deviation of split frequencies: 0.010407
861000 -- (-1881.795) (-1898.628) (-1877.837) [-1878.870] * (-1883.155) (-1877.333) [-1885.042] (-1876.729) -- 0:01:36
862000 -- [-1880.950] (-1889.629) (-1889.262) (-1896.825) * (-1888.230) (-1884.660) (-1874.971) [-1863.923] -- 0:01:36
863000 -- [-1870.140] (-1895.083) (-1902.891) (-1885.152) * (-1896.430) [-1881.057] (-1884.182) (-1862.941) -- 0:01:35
864000 -- (-1866.765) (-1900.859) (-1884.100) [-1873.767] * (-1897.116) (-1891.463) [-1874.793] (-1865.070) -- 0:01:34
865000 -- [-1869.066] (-1893.802) (-1894.433) (-1866.815) * (-1887.782) [-1875.637] (-1884.778) (-1886.417) -- 0:01:34
Average standard deviation of split frequencies: 0.010106
866000 -- (-1896.280) (-1890.160) [-1884.244] (-1873.327) * (-1896.402) (-1883.243) (-1885.926) [-1876.776] -- 0:01:33
867000 -- (-1875.755) [-1874.735] (-1891.271) (-1880.881) * (-1878.374) (-1877.856) (-1899.204) [-1871.574] -- 0:01:32
868000 -- [-1883.465] (-1880.673) (-1889.592) (-1895.148) * [-1892.057] (-1890.444) (-1889.961) (-1871.714) -- 0:01:32
869000 -- [-1887.612] (-1894.152) (-1892.807) (-1885.561) * [-1866.886] (-1899.960) (-1889.251) (-1871.179) -- 0:01:31
870000 -- (-1877.385) [-1879.744] (-1885.657) (-1874.708) * (-1884.257) (-1898.033) (-1895.402) [-1880.619] -- 0:01:30
Average standard deviation of split frequencies: 0.010217
871000 -- (-1877.511) (-1873.695) (-1880.651) [-1881.952] * (-1876.292) (-1883.545) [-1875.724] (-1883.582) -- 0:01:29
872000 -- (-1883.728) (-1888.325) (-1887.391) [-1874.504] * [-1880.968] (-1894.043) (-1871.717) (-1886.480) -- 0:01:29
873000 -- (-1889.390) (-1880.403) (-1882.071) [-1869.096] * [-1871.733] (-1875.706) (-1880.343) (-1896.103) -- 0:01:28
874000 -- (-1872.119) [-1888.083] (-1885.488) (-1891.118) * [-1872.093] (-1881.928) (-1878.764) (-1886.404) -- 0:01:27
875000 -- (-1865.187) (-1885.100) [-1874.396] (-1894.358) * (-1874.689) (-1879.344) [-1869.740] (-1879.463) -- 0:01:27
Average standard deviation of split frequencies: 0.010248
876000 -- (-1867.072) (-1873.453) [-1870.331] (-1892.899) * (-1885.794) (-1891.124) [-1862.048] (-1882.084) -- 0:01:26
877000 -- (-1870.517) [-1875.444] (-1872.201) (-1887.999) * (-1873.522) (-1885.287) [-1879.591] (-1880.874) -- 0:01:25
878000 -- (-1884.112) (-1870.218) [-1870.877] (-1872.215) * (-1873.324) (-1880.240) (-1878.649) [-1875.073] -- 0:01:25
879000 -- (-1862.878) (-1881.406) [-1873.147] (-1887.520) * (-1881.929) (-1887.936) (-1872.972) [-1870.485] -- 0:01:24
880000 -- [-1870.860] (-1877.511) (-1894.410) (-1890.948) * (-1879.843) (-1873.193) (-1884.623) [-1865.734] -- 0:01:23
Average standard deviation of split frequencies: 0.009984
881000 -- (-1877.177) (-1870.691) (-1895.724) [-1882.050] * [-1875.962] (-1870.242) (-1896.703) (-1885.525) -- 0:01:23
882000 -- (-1899.661) (-1883.098) (-1886.976) [-1879.203] * (-1880.673) [-1866.628] (-1886.185) (-1870.565) -- 0:01:22
883000 -- (-1893.945) (-1860.295) (-1891.045) [-1879.994] * (-1866.331) (-1869.776) (-1881.048) [-1879.663] -- 0:01:21
884000 -- [-1872.730] (-1868.529) (-1882.016) (-1884.893) * (-1887.853) (-1868.231) (-1879.778) [-1880.623] -- 0:01:20
885000 -- (-1880.265) [-1867.233] (-1869.407) (-1876.505) * (-1887.087) (-1873.099) [-1872.473] (-1875.229) -- 0:01:20
Average standard deviation of split frequencies: 0.010294
886000 -- (-1887.449) [-1877.193] (-1877.859) (-1889.113) * (-1875.987) (-1889.131) [-1873.152] (-1877.096) -- 0:01:19
887000 -- [-1868.776] (-1871.471) (-1877.422) (-1879.643) * [-1875.684] (-1878.767) (-1875.270) (-1884.665) -- 0:01:18
888000 -- (-1876.285) (-1871.806) [-1861.341] (-1869.824) * (-1877.371) (-1870.931) [-1873.706] (-1890.794) -- 0:01:18
889000 -- (-1888.813) (-1873.381) [-1873.229] (-1882.857) * (-1883.470) (-1875.027) [-1866.963] (-1885.231) -- 0:01:17
890000 -- (-1898.234) (-1879.726) [-1869.873] (-1891.369) * [-1870.056] (-1880.866) (-1892.781) (-1879.061) -- 0:01:16
Average standard deviation of split frequencies: 0.010493
891000 -- (-1903.085) (-1901.036) (-1889.963) [-1873.838] * [-1864.222] (-1882.286) (-1897.608) (-1879.406) -- 0:01:16
892000 -- (-1887.713) (-1884.660) [-1876.260] (-1882.540) * (-1891.230) (-1892.705) (-1880.276) [-1877.433] -- 0:01:15
893000 -- (-1889.051) [-1875.876] (-1874.402) (-1878.702) * [-1885.604] (-1884.741) (-1886.701) (-1904.801) -- 0:01:14
894000 -- [-1867.160] (-1891.509) (-1872.809) (-1863.479) * (-1887.878) (-1890.249) (-1871.456) [-1882.469] -- 0:01:14
895000 -- [-1863.754] (-1882.637) (-1882.250) (-1890.460) * (-1884.758) (-1900.504) [-1871.215] (-1873.151) -- 0:01:13
Average standard deviation of split frequencies: 0.009973
896000 -- [-1863.982] (-1881.518) (-1878.989) (-1898.101) * (-1886.308) (-1880.252) (-1890.649) [-1876.481] -- 0:01:12
897000 -- (-1867.725) (-1906.663) [-1874.610] (-1895.812) * (-1888.442) [-1881.332] (-1893.134) (-1875.150) -- 0:01:11
898000 -- (-1886.133) [-1870.881] (-1871.205) (-1892.225) * (-1899.710) (-1879.550) [-1883.579] (-1877.642) -- 0:01:11
899000 -- (-1882.367) (-1872.786) [-1884.382] (-1894.584) * (-1901.384) (-1860.796) [-1874.911] (-1874.656) -- 0:01:10
900000 -- [-1879.142] (-1873.377) (-1891.175) (-1885.818) * (-1894.200) (-1871.074) (-1889.910) [-1878.326] -- 0:01:09
Average standard deviation of split frequencies: 0.009876
901000 -- [-1897.836] (-1875.561) (-1899.609) (-1880.163) * (-1884.305) (-1870.750) (-1888.209) [-1871.362] -- 0:01:09
902000 -- (-1885.516) (-1889.033) (-1885.429) [-1871.554] * (-1891.248) (-1881.730) (-1889.385) [-1888.160] -- 0:01:08
903000 -- (-1893.306) [-1870.882] (-1879.085) (-1878.820) * (-1897.227) [-1878.426] (-1883.510) (-1891.250) -- 0:01:07
904000 -- (-1885.092) [-1860.883] (-1897.305) (-1871.888) * (-1896.155) [-1869.596] (-1862.222) (-1876.272) -- 0:01:07
905000 -- (-1912.375) (-1889.620) (-1880.656) [-1868.382] * (-1893.597) (-1882.603) [-1878.981] (-1872.491) -- 0:01:06
Average standard deviation of split frequencies: 0.009705
906000 -- (-1901.882) (-1899.190) (-1867.628) [-1881.939] * (-1880.124) (-1876.275) (-1872.577) [-1873.197] -- 0:01:05
907000 -- (-1894.510) (-1888.942) (-1884.667) [-1872.962] * (-1885.445) (-1883.105) (-1881.228) [-1864.904] -- 0:01:05
908000 -- (-1893.888) (-1884.894) [-1877.212] (-1873.255) * [-1879.886] (-1891.923) (-1868.720) (-1883.987) -- 0:01:04
909000 -- (-1879.253) [-1875.235] (-1872.660) (-1878.820) * (-1886.650) [-1876.039] (-1873.329) (-1870.892) -- 0:01:03
910000 -- (-1877.681) (-1870.170) [-1872.916] (-1881.767) * [-1885.542] (-1881.072) (-1910.794) (-1889.249) -- 0:01:03
Average standard deviation of split frequencies: 0.009610
911000 -- (-1876.907) (-1883.210) (-1865.514) [-1870.197] * (-1882.484) [-1876.869] (-1889.790) (-1880.314) -- 0:01:02
912000 -- (-1879.689) (-1893.663) (-1875.811) [-1868.444] * [-1872.649] (-1885.918) (-1888.174) (-1874.853) -- 0:01:01
913000 -- (-1880.419) (-1884.335) (-1888.301) [-1874.654] * (-1873.015) (-1877.345) [-1889.719] (-1879.588) -- 0:01:00
914000 -- (-1886.779) (-1873.592) (-1874.757) [-1867.804] * (-1875.784) (-1890.655) (-1887.234) [-1881.992] -- 0:01:00
915000 -- (-1879.013) (-1884.561) (-1878.672) [-1869.856] * [-1872.552] (-1908.438) (-1889.692) (-1873.548) -- 0:00:59
Average standard deviation of split frequencies: 0.009711
916000 -- (-1891.936) (-1877.322) [-1889.527] (-1876.650) * (-1868.987) (-1891.246) (-1885.202) [-1874.788] -- 0:00:58
917000 -- (-1886.095) (-1892.726) (-1875.603) [-1869.674] * [-1867.522] (-1893.314) (-1892.204) (-1875.190) -- 0:00:58
918000 -- (-1883.738) (-1893.381) (-1894.017) [-1874.206] * [-1871.503] (-1896.155) (-1876.912) (-1888.637) -- 0:00:57
919000 -- (-1887.956) [-1879.669] (-1878.649) (-1885.232) * [-1873.561] (-1912.909) (-1904.447) (-1893.771) -- 0:00:56
920000 -- (-1893.490) (-1873.391) (-1875.284) [-1864.581] * [-1868.990] (-1873.251) (-1887.857) (-1895.552) -- 0:00:56
Average standard deviation of split frequencies: 0.009573
921000 -- (-1872.244) (-1893.752) [-1865.049] (-1877.026) * (-1889.479) [-1869.227] (-1882.413) (-1896.744) -- 0:00:55
922000 -- [-1873.275] (-1893.163) (-1878.652) (-1882.587) * (-1864.499) [-1865.043] (-1901.053) (-1891.053) -- 0:00:54
923000 -- (-1876.740) [-1876.082] (-1877.792) (-1873.676) * (-1871.286) (-1871.037) (-1892.452) [-1876.425] -- 0:00:53
924000 -- (-1875.535) [-1872.791] (-1884.732) (-1893.911) * [-1861.953] (-1888.236) (-1903.411) (-1897.253) -- 0:00:53
925000 -- (-1878.108) [-1876.357] (-1883.276) (-1869.211) * (-1866.025) (-1879.090) (-1903.135) [-1883.937] -- 0:00:52
Average standard deviation of split frequencies: 0.009274
926000 -- (-1872.245) [-1872.238] (-1862.866) (-1875.840) * (-1870.911) [-1871.448] (-1895.020) (-1875.265) -- 0:00:51
927000 -- (-1882.646) [-1872.540] (-1868.598) (-1871.521) * (-1878.990) [-1880.683] (-1898.851) (-1871.341) -- 0:00:51
928000 -- (-1892.246) (-1894.245) (-1868.813) [-1877.401] * [-1873.035] (-1905.051) (-1902.561) (-1872.373) -- 0:00:50
929000 -- (-1889.934) (-1905.009) (-1877.127) [-1876.415] * (-1884.799) (-1891.015) [-1881.497] (-1869.461) -- 0:00:49
930000 -- [-1865.242] (-1895.444) (-1879.632) (-1875.374) * [-1872.129] (-1902.126) (-1875.479) (-1878.298) -- 0:00:49
Average standard deviation of split frequencies: 0.009272
931000 -- [-1874.094] (-1883.800) (-1884.006) (-1881.391) * [-1874.197] (-1896.919) (-1885.489) (-1877.517) -- 0:00:48
932000 -- (-1878.910) [-1878.924] (-1888.137) (-1876.999) * (-1877.252) (-1883.227) [-1876.493] (-1886.417) -- 0:00:47
933000 -- (-1869.234) (-1885.039) [-1874.024] (-1889.619) * (-1879.314) (-1881.074) (-1870.587) [-1872.372] -- 0:00:46
934000 -- (-1870.432) [-1874.479] (-1886.483) (-1886.018) * (-1889.182) (-1895.736) (-1879.331) [-1877.503] -- 0:00:46
935000 -- (-1880.282) (-1899.208) [-1872.078] (-1883.903) * (-1893.455) [-1863.897] (-1891.274) (-1869.987) -- 0:00:45
Average standard deviation of split frequencies: 0.009022
936000 -- (-1897.924) (-1888.317) [-1865.285] (-1891.830) * (-1888.782) [-1874.654] (-1890.176) (-1875.093) -- 0:00:44
937000 -- [-1882.907] (-1879.361) (-1879.810) (-1887.218) * (-1875.326) (-1862.631) (-1883.935) [-1877.597] -- 0:00:44
938000 -- [-1881.696] (-1872.098) (-1873.019) (-1892.844) * (-1890.845) (-1864.735) [-1876.698] (-1884.675) -- 0:00:43
939000 -- (-1872.493) [-1873.840] (-1889.172) (-1892.681) * (-1874.149) [-1865.541] (-1897.502) (-1891.928) -- 0:00:42
940000 -- (-1873.291) [-1869.902] (-1866.473) (-1889.749) * (-1886.748) (-1868.587) (-1910.025) [-1874.029] -- 0:00:42
Average standard deviation of split frequencies: 0.009108
941000 -- [-1870.034] (-1878.689) (-1877.996) (-1876.879) * (-1892.339) (-1868.536) (-1897.683) [-1873.534] -- 0:00:41
942000 -- (-1865.435) (-1888.339) [-1879.007] (-1874.466) * (-1893.430) (-1875.462) (-1894.317) [-1864.468] -- 0:00:40
943000 -- (-1875.806) (-1890.918) [-1862.297] (-1892.569) * (-1889.732) (-1874.915) (-1896.988) [-1873.518] -- 0:00:39
944000 -- (-1878.205) (-1883.601) (-1881.287) [-1880.376] * (-1883.316) (-1860.662) (-1903.157) [-1877.204] -- 0:00:39
945000 -- (-1882.248) [-1872.351] (-1885.343) (-1888.438) * [-1862.584] (-1865.490) (-1898.504) (-1894.343) -- 0:00:38
Average standard deviation of split frequencies: 0.009186
946000 -- [-1879.052] (-1862.749) (-1885.955) (-1882.311) * (-1878.592) [-1894.247] (-1883.263) (-1886.238) -- 0:00:37
947000 -- (-1874.486) [-1864.492] (-1890.853) (-1870.384) * (-1870.182) [-1873.070] (-1884.666) (-1890.397) -- 0:00:37
948000 -- (-1872.856) (-1896.869) [-1871.099] (-1864.464) * (-1884.130) (-1887.496) (-1883.313) [-1874.626] -- 0:00:36
949000 -- (-1886.616) [-1876.379] (-1870.162) (-1872.436) * (-1885.005) (-1891.438) (-1875.333) [-1865.292] -- 0:00:35
950000 -- (-1872.748) (-1886.553) (-1877.774) [-1869.593] * (-1885.716) (-1883.539) (-1873.136) [-1866.507] -- 0:00:34
Average standard deviation of split frequencies: 0.008861
951000 -- (-1884.154) (-1882.061) (-1876.978) [-1867.270] * (-1877.455) (-1884.337) (-1876.476) [-1867.315] -- 0:00:34
952000 -- (-1880.114) (-1875.297) [-1873.678] (-1886.162) * (-1885.877) (-1870.900) (-1880.329) [-1872.470] -- 0:00:33
953000 -- [-1864.652] (-1873.771) (-1881.739) (-1881.870) * (-1878.752) [-1857.941] (-1892.021) (-1861.787) -- 0:00:32
954000 -- [-1867.125] (-1889.627) (-1878.232) (-1883.192) * (-1878.610) [-1869.637] (-1883.729) (-1897.788) -- 0:00:32
955000 -- [-1859.590] (-1890.803) (-1896.574) (-1867.705) * (-1881.211) [-1883.402] (-1883.796) (-1889.275) -- 0:00:31
Average standard deviation of split frequencies: 0.008854
956000 -- (-1878.241) (-1891.615) (-1885.558) [-1869.170] * (-1880.820) [-1872.937] (-1892.158) (-1889.715) -- 0:00:30
957000 -- (-1895.182) (-1886.461) (-1886.029) [-1881.219] * (-1908.939) (-1867.107) [-1871.780] (-1893.962) -- 0:00:30
958000 -- (-1876.763) (-1892.051) [-1869.328] (-1887.251) * (-1906.255) [-1880.819] (-1881.327) (-1871.399) -- 0:00:29
959000 -- [-1883.192] (-1892.380) (-1886.409) (-1877.145) * (-1874.661) (-1883.146) (-1876.888) [-1867.156] -- 0:00:28
960000 -- [-1880.762] (-1879.608) (-1892.748) (-1872.640) * (-1883.297) (-1871.558) (-1894.765) [-1866.162] -- 0:00:27
Average standard deviation of split frequencies: 0.008939
961000 -- (-1879.855) [-1880.485] (-1888.584) (-1891.513) * (-1880.912) [-1887.579] (-1899.505) (-1879.625) -- 0:00:27
962000 -- (-1882.508) (-1877.181) [-1880.523] (-1891.507) * (-1873.500) (-1905.134) [-1881.842] (-1887.221) -- 0:00:26
963000 -- (-1882.998) (-1881.315) (-1886.864) [-1876.896] * (-1879.140) (-1894.049) [-1876.453] (-1870.937) -- 0:00:25
964000 -- (-1897.290) [-1869.051] (-1860.958) (-1871.182) * (-1876.534) (-1894.650) [-1872.894] (-1867.442) -- 0:00:25
965000 -- (-1891.242) [-1879.759] (-1877.800) (-1870.052) * [-1869.981] (-1887.395) (-1879.975) (-1874.686) -- 0:00:24
Average standard deviation of split frequencies: 0.009145
966000 -- (-1898.921) (-1876.415) [-1882.750] (-1885.964) * [-1877.836] (-1879.122) (-1889.425) (-1877.267) -- 0:00:23
967000 -- [-1872.981] (-1867.449) (-1885.874) (-1882.194) * [-1861.117] (-1877.819) (-1882.735) (-1883.403) -- 0:00:23
968000 -- (-1879.733) (-1877.166) [-1867.641] (-1888.376) * [-1861.176] (-1878.732) (-1893.116) (-1886.175) -- 0:00:22
969000 -- (-1891.030) [-1869.027] (-1890.877) (-1896.007) * (-1871.517) (-1884.541) [-1883.432] (-1867.940) -- 0:00:21
970000 -- (-1878.266) (-1868.374) [-1874.102] (-1894.269) * (-1875.750) (-1876.120) [-1872.941] (-1895.917) -- 0:00:20
Average standard deviation of split frequencies: 0.009270
971000 -- [-1867.810] (-1881.121) (-1878.702) (-1904.754) * (-1869.312) (-1888.081) [-1870.947] (-1884.481) -- 0:00:20
972000 -- (-1870.674) (-1875.763) [-1871.421] (-1878.335) * [-1878.249] (-1873.327) (-1860.917) (-1879.016) -- 0:00:19
973000 -- (-1873.672) (-1887.905) [-1877.652] (-1882.104) * [-1873.181] (-1896.325) (-1872.077) (-1870.844) -- 0:00:18
974000 -- (-1890.475) (-1893.248) [-1882.484] (-1889.835) * [-1874.339] (-1869.806) (-1872.723) (-1884.089) -- 0:00:18
975000 -- [-1881.056] (-1888.847) (-1898.939) (-1886.608) * (-1901.294) [-1854.213] (-1872.282) (-1903.493) -- 0:00:17
Average standard deviation of split frequencies: 0.009051
976000 -- (-1887.809) (-1878.191) [-1873.943] (-1879.609) * [-1887.350] (-1873.224) (-1875.855) (-1887.888) -- 0:00:16
977000 -- [-1874.186] (-1883.001) (-1870.761) (-1874.548) * (-1892.457) (-1879.875) [-1864.283] (-1886.251) -- 0:00:16
978000 -- [-1864.038] (-1889.641) (-1873.173) (-1891.189) * (-1878.730) [-1871.537] (-1878.493) (-1883.795) -- 0:00:15
979000 -- (-1870.955) [-1875.676] (-1875.526) (-1889.204) * (-1892.069) (-1877.688) [-1882.427] (-1886.013) -- 0:00:14
980000 -- (-1876.105) [-1874.036] (-1883.455) (-1898.990) * (-1902.549) (-1875.015) [-1879.518] (-1880.971) -- 0:00:13
Average standard deviation of split frequencies: 0.008736
981000 -- (-1878.111) [-1869.179] (-1898.939) (-1893.332) * (-1908.106) [-1870.930] (-1881.759) (-1876.147) -- 0:00:13
982000 -- [-1880.115] (-1877.297) (-1882.607) (-1871.025) * (-1917.924) [-1872.600] (-1869.505) (-1884.751) -- 0:00:12
983000 -- (-1887.399) [-1868.473] (-1891.162) (-1884.705) * (-1887.576) (-1886.102) [-1866.657] (-1884.420) -- 0:00:11
984000 -- [-1867.111] (-1869.764) (-1915.394) (-1873.869) * (-1885.307) (-1878.649) (-1884.386) [-1872.663] -- 0:00:11
985000 -- [-1869.081] (-1885.495) (-1870.173) (-1872.155) * (-1886.766) [-1876.056] (-1888.290) (-1885.503) -- 0:00:10
Average standard deviation of split frequencies: 0.008668
986000 -- (-1879.197) (-1883.596) [-1878.864] (-1877.951) * [-1874.260] (-1891.803) (-1874.225) (-1885.375) -- 0:00:09
987000 -- (-1876.741) (-1877.433) (-1876.697) [-1885.480] * (-1887.971) (-1888.947) (-1881.553) [-1879.907] -- 0:00:09
988000 -- [-1860.227] (-1865.959) (-1878.064) (-1897.723) * (-1892.501) (-1889.981) (-1887.714) [-1886.137] -- 0:00:08
989000 -- [-1865.852] (-1880.185) (-1880.162) (-1878.715) * [-1873.346] (-1875.325) (-1898.506) (-1888.335) -- 0:00:07
990000 -- [-1867.174] (-1883.556) (-1873.771) (-1883.039) * (-1874.668) [-1878.816] (-1881.474) (-1885.158) -- 0:00:06
Average standard deviation of split frequencies: 0.008813
991000 -- [-1870.550] (-1910.364) (-1882.524) (-1885.596) * (-1883.365) (-1874.721) (-1901.655) [-1873.301] -- 0:00:06
992000 -- (-1873.369) (-1886.312) [-1872.092] (-1872.996) * (-1894.611) [-1873.384] (-1902.148) (-1869.316) -- 0:00:05
993000 -- (-1890.874) (-1881.642) [-1874.000] (-1881.395) * [-1878.153] (-1869.862) (-1887.818) (-1883.326) -- 0:00:04
994000 -- (-1877.728) (-1898.663) (-1872.291) [-1868.907] * (-1882.132) (-1876.886) (-1878.302) [-1858.719] -- 0:00:04
995000 -- (-1876.460) (-1886.328) [-1862.951] (-1881.041) * (-1916.186) (-1905.819) [-1880.733] (-1868.501) -- 0:00:03
Average standard deviation of split frequencies: 0.008972
996000 -- (-1879.647) (-1875.698) (-1879.125) [-1875.938] * (-1891.124) (-1902.624) [-1881.777] (-1879.657) -- 0:00:02
997000 -- (-1876.377) (-1883.674) [-1872.642] (-1880.718) * (-1883.199) (-1890.578) (-1868.098) [-1882.084] -- 0:00:02
998000 -- [-1867.631] (-1880.897) (-1886.506) (-1875.149) * [-1879.870] (-1892.408) (-1868.917) (-1878.527) -- 0:00:01
999000 -- (-1875.172) [-1875.294] (-1879.901) (-1887.404) * (-1893.213) (-1884.154) [-1866.347] (-1869.652) -- 0:00:00
1000000 -- (-1879.013) (-1866.924) [-1872.141] (-1894.122) * (-1889.830) (-1884.167) [-1868.585] (-1885.385) -- 0:00:00
Average standard deviation of split frequencies: 0.008684
Analysis completed in 11 mins 39 seconds
Analysis used 696.47 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -1849.56
Likelihood of best state for "cold" chain of run 2 was -1852.28
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
57.5 % ( 42 %) Dirichlet(Revmat{all})
72.6 % ( 66 %) Slider(Revmat{all})
25.3 % ( 19 %) Dirichlet(Pi{all})
26.7 % ( 29 %) Slider(Pi{all})
80.3 % ( 61 %) Multiplier(Alpha{1,2})
65.1 % ( 41 %) Multiplier(Alpha{3})
89.3 % ( 82 %) Slider(Pinvar{all})
56.3 % ( 57 %) ExtSPR(Tau{all},V{all})
52.3 % ( 37 %) ExtTBR(Tau{all},V{all})
67.1 % ( 63 %) NNI(Tau{all},V{all})
41.2 % ( 44 %) ParsSPR(Tau{all},V{all})
27.6 % ( 22 %) Multiplier(V{all})
78.1 % ( 87 %) Nodeslider(V{all})
26.2 % ( 26 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
58.7 % ( 53 %) Dirichlet(Revmat{all})
73.1 % ( 67 %) Slider(Revmat{all})
24.8 % ( 20 %) Dirichlet(Pi{all})
26.7 % ( 24 %) Slider(Pi{all})
80.6 % ( 69 %) Multiplier(Alpha{1,2})
65.3 % ( 39 %) Multiplier(Alpha{3})
89.4 % ( 75 %) Slider(Pinvar{all})
56.2 % ( 57 %) ExtSPR(Tau{all},V{all})
51.7 % ( 51 %) ExtTBR(Tau{all},V{all})
67.3 % ( 72 %) NNI(Tau{all},V{all})
41.2 % ( 51 %) ParsSPR(Tau{all},V{all})
27.6 % ( 23 %) Multiplier(V{all})
78.2 % ( 72 %) Nodeslider(V{all})
25.9 % ( 26 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.49 0.18 0.05
2 | 166967 0.51 0.20
3 | 166366 166942 0.53
4 | 166893 166154 166678
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.48 0.17 0.05
2 | 166574 0.51 0.20
3 | 166937 165724 0.53
4 | 167006 167069 166690
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -1869.82
| 2 2 2 |
| 2 1|
| 2 2 1 2 1 1 |
| 2 1 *1 1* 2 1 1 2 ** |
|1 121 1 11 1 2 2 21 |
| 12 1 1 2 11 111 2 2 1 1 1 |
| 1 1 222 12 2 22 * 22 121 22 |
| *2 211 12 * 1 2 1 * |
|2 2 12 * 2 2 22 2 * 1 * 1 2 2|
| 12 2 2 11 1 2 |
| 1 |
| |
| 1 |
| 2 |
| 1 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -1879.33
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1861.38 -1892.42
2 -1860.30 -1890.60
--------------------------------------
TOTAL -1860.70 -1891.87
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.078192 0.000141 0.056898 0.101899 0.077215 732.97 857.04 1.000
r(A<->C){all} 0.072390 0.001366 0.011023 0.143326 0.066258 461.47 538.30 1.000
r(A<->G){all} 0.176295 0.001829 0.099648 0.261799 0.172317 664.06 730.51 1.000
r(A<->T){all} 0.039584 0.000253 0.013886 0.072311 0.037492 639.21 817.09 1.000
r(C<->G){all} 0.071055 0.001934 0.002946 0.157102 0.062282 426.55 586.46 1.000
r(C<->T){all} 0.571892 0.004041 0.440000 0.686545 0.571609 468.31 529.95 1.000
r(G<->T){all} 0.068786 0.000638 0.024710 0.118966 0.065878 716.91 739.15 1.000
pi(A){all} 0.303315 0.000181 0.276525 0.328321 0.302874 884.54 950.27 1.000
pi(C){all} 0.110607 0.000084 0.093916 0.129083 0.110425 1048.83 1096.80 1.000
pi(G){all} 0.203141 0.000139 0.180112 0.225931 0.202833 876.70 972.42 1.000
pi(T){all} 0.382936 0.000203 0.356176 0.411129 0.382978 925.90 970.63 1.000
alpha{1,2} 0.416330 0.404146 0.000109 1.668365 0.188343 953.57 991.32 1.000
alpha{3} 2.106430 1.611899 0.238352 4.579625 1.812278 1118.96 1265.50 1.000
pinvar{all} 0.230729 0.023074 0.000033 0.503592 0.215849 903.29 907.30 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C11
4 -- C12
5 -- C14
6 -- C15
7 -- C16
8 -- C18
9 -- C19
10 -- C2
11 -- C21
12 -- C22
13 -- C23
14 -- C24
15 -- C25
16 -- C26
17 -- C28
18 -- C30
19 -- C31
20 -- C33
21 -- C34
22 -- C35
23 -- C37
24 -- C38
25 -- C4
26 -- C5
27 -- C6
28 -- C7
29 -- C8
30 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------------------------
1 -- .*****************************
2 -- .*............................
3 -- ..*...........................
4 -- ...*..........................
5 -- ....*.........................
6 -- .....*........................
7 -- ......*.......................
8 -- .......*......................
9 -- ........*.....................
10 -- .........*....................
11 -- ..........*...................
12 -- ...........*..................
13 -- ............*.................
14 -- .............*................
15 -- ..............*...............
16 -- ...............*..............
17 -- ................*.............
18 -- .................*............
19 -- ..................*...........
20 -- ...................*..........
21 -- ....................*.........
22 -- .....................*........
23 -- ......................*.......
24 -- .......................*......
25 -- ........................*.....
26 -- .........................*....
27 -- ..........................*...
28 -- ...........................*..
29 -- ............................*.
30 -- .............................*
31 -- ...*.............*...***......
32 -- ..................*.....*.....
33 -- ..........*...*...............
34 -- ..........**..**..............
35 -- ..........................***.
36 -- ...*.............*....**......
37 -- ...*..................**......
38 -- ...................**.........
39 -- .********...**..**************
40 -- .**.*****...**..*.***...******
41 -- ...........*...*..............
42 -- ...........................**.
43 -- ..........................*.*.
44 -- ..........**..*...............
45 -- ...*...................*......
46 -- ...*..................*.......
47 -- ..........................**..
48 -- ..........*...**..............
49 -- ......................**......
50 -- .********.********************
51 -- .*********..**..**************
52 -- .........***..**..............
53 -- ...*.............*.*****......
------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 3002 1.000000 0.000000 1.000000 1.000000 2
33 2993 0.997002 0.000471 0.996669 0.997335 2
34 2985 0.994337 0.000471 0.994004 0.994670 2
35 2960 0.986009 0.006595 0.981346 0.990673 2
36 2861 0.953031 0.008009 0.947368 0.958694 2
37 2782 0.926716 0.024497 0.909394 0.944037 2
38 2334 0.777482 0.011306 0.769487 0.785476 2
39 1859 0.619254 0.003298 0.616922 0.621586 2
40 1083 0.360759 0.012719 0.351765 0.369753 2
41 1021 0.340107 0.001413 0.339107 0.341106 2
42 1018 0.339107 0.014133 0.329114 0.349101 2
43 1014 0.337775 0.016959 0.325783 0.349767 2
44 1006 0.335110 0.008480 0.329114 0.341106 2
45 983 0.327448 0.007066 0.322452 0.332445 2
46 966 0.321785 0.006595 0.317122 0.326449 2
47 965 0.321452 0.005182 0.317788 0.325117 2
48 961 0.320120 0.005182 0.316456 0.323784 2
49 958 0.319121 0.006595 0.314457 0.323784 2
50 915 0.304797 0.019315 0.291139 0.318454 2
51 808 0.269154 0.008480 0.263158 0.275150 2
52 795 0.264823 0.018373 0.251832 0.277815 2
53 733 0.244171 0.014604 0.233844 0.254497 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.000587 0.000000 0.000000 0.001749 0.000414 1.000 2
length{all}[2] 0.000566 0.000000 0.000000 0.001690 0.000397 1.000 2
length{all}[3] 0.000586 0.000000 0.000000 0.001761 0.000401 1.000 2
length{all}[4] 0.000579 0.000000 0.000000 0.001727 0.000406 1.000 2
length{all}[5] 0.000572 0.000000 0.000000 0.001729 0.000385 1.001 2
length{all}[6] 0.000558 0.000000 0.000000 0.001631 0.000399 1.000 2
length{all}[7] 0.000552 0.000000 0.000000 0.001636 0.000383 1.002 2
length{all}[8] 0.000565 0.000000 0.000000 0.001740 0.000390 1.000 2
length{all}[9] 0.001148 0.000001 0.000015 0.002670 0.000964 1.000 2
length{all}[10] 0.000597 0.000000 0.000000 0.001855 0.000399 1.000 2
length{all}[11] 0.000564 0.000000 0.000000 0.001709 0.000394 1.000 2
length{all}[12] 0.000571 0.000000 0.000000 0.001732 0.000398 1.001 2
length{all}[13] 0.000581 0.000000 0.000000 0.001753 0.000407 1.000 2
length{all}[14] 0.000575 0.000000 0.000000 0.001774 0.000400 1.000 2
length{all}[15] 0.000574 0.000000 0.000000 0.001737 0.000392 1.000 2
length{all}[16] 0.000572 0.000000 0.000000 0.001734 0.000400 1.000 2
length{all}[17] 0.000573 0.000000 0.000000 0.001675 0.000402 1.000 2
length{all}[18] 0.000602 0.000000 0.000000 0.001823 0.000403 1.000 2
length{all}[19] 0.000565 0.000000 0.000000 0.001654 0.000397 1.001 2
length{all}[20] 0.000610 0.000000 0.000000 0.001780 0.000445 1.001 2
length{all}[21] 0.000626 0.000000 0.000000 0.001855 0.000439 1.000 2
length{all}[22] 0.000747 0.000001 0.000000 0.002292 0.000502 1.000 2
length{all}[23] 0.000561 0.000000 0.000000 0.001708 0.000379 1.000 2
length{all}[24] 0.000590 0.000000 0.000000 0.001786 0.000403 1.000 2
length{all}[25] 0.000579 0.000000 0.000000 0.001719 0.000409 1.000 2
length{all}[26] 0.000574 0.000000 0.000000 0.001735 0.000398 1.000 2
length{all}[27] 0.000574 0.000000 0.000000 0.001727 0.000396 1.000 2
length{all}[28] 0.000609 0.000000 0.000000 0.001858 0.000411 1.000 2
length{all}[29] 0.000572 0.000000 0.000000 0.001779 0.000390 1.001 2
length{all}[30] 0.000560 0.000000 0.000000 0.001662 0.000385 1.000 2
length{all}[31] 0.039092 0.000054 0.026296 0.053835 0.038255 1.000 2
length{all}[32] 0.001734 0.000001 0.000184 0.003781 0.001502 1.000 2
length{all}[33] 0.001155 0.000001 0.000019 0.002674 0.000964 1.000 2
length{all}[34] 0.001167 0.000001 0.000040 0.002859 0.000978 1.000 2
length{all}[35] 0.001129 0.000001 0.000026 0.002713 0.000936 1.000 2
length{all}[36] 0.002158 0.000001 0.000300 0.004447 0.001967 1.000 2
length{all}[37] 0.001120 0.000001 0.000024 0.002705 0.000925 1.000 2
length{all}[38] 0.001103 0.000001 0.000006 0.002733 0.000894 1.000 2
length{all}[39] 0.001112 0.000001 0.000002 0.002742 0.000904 1.000 2
length{all}[40] 0.001096 0.000001 0.000011 0.002674 0.000893 1.001 2
length{all}[41] 0.000568 0.000000 0.000001 0.001623 0.000398 0.999 2
length{all}[42] 0.000575 0.000000 0.000001 0.001779 0.000366 1.001 2
length{all}[43] 0.000591 0.000000 0.000001 0.001875 0.000381 1.000 2
length{all}[44] 0.000574 0.000000 0.000001 0.001669 0.000391 1.006 2
length{all}[45] 0.000607 0.000000 0.000000 0.001840 0.000410 1.000 2
length{all}[46] 0.000580 0.000000 0.000000 0.001688 0.000410 1.000 2
length{all}[47] 0.000543 0.000000 0.000000 0.001742 0.000342 1.000 2
length{all}[48] 0.000583 0.000000 0.000004 0.001696 0.000394 0.999 2
length{all}[49] 0.000596 0.000000 0.000000 0.001832 0.000427 1.001 2
length{all}[50] 0.000687 0.000000 0.000001 0.002061 0.000473 1.001 2
length{all}[51] 0.000618 0.000000 0.000000 0.001771 0.000417 1.001 2
length{all}[52] 0.000588 0.000000 0.000003 0.001742 0.000435 1.000 2
length{all}[53] 0.001153 0.000001 0.000009 0.003016 0.000934 0.999 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.008684
Maximum standard deviation of split frequencies = 0.024497
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.006
Clade credibility values:
/---------------------------------------------------------------------- C1 (1)
|
|---------------------------------------------------------------------- C2 (10)
|
| /-------------- C21 (11)
| /-----100-----+
| | \-------------- C25 (15)
| |
|--------------------99-------------------+---------------------------- C22 (12)
| |
| \---------------------------- C26 (16)
|
| /-------------------------------------------------------- C10 (2)
| |
| |-------------------------------------------------------- C11 (3)
| |
| | /-------------- C12 (4)
| | |
+ | /------93-----+-------------- C37 (23)
| | | |
| | /------95-----+ \-------------- C38 (24)
| | | |
| |-----100-----+ \---------------------------- C30 (18)
| | |
| | \------------------------------------------ C35 (22)
| |
| |-------------------------------------------------------- C14 (5)
| |
| |-------------------------------------------------------- C15 (6)
| |
| |-------------------------------------------------------- C16 (7)
| |
| |-------------------------------------------------------- C18 (8)
| |
| |-------------------------------------------------------- C19 (9)
\------62-----+
|-------------------------------------------------------- C23 (13)
|
|-------------------------------------------------------- C24 (14)
|
|-------------------------------------------------------- C28 (17)
|
| /-------------- C31 (19)
|-------------------100-------------------+
| \-------------- C4 (25)
|
| /-------------- C33 (20)
|--------------------78-------------------+
| \-------------- C34 (21)
|
|-------------------------------------------------------- C5 (26)
|
| /-------------- C6 (27)
| |
|--------------------99-------------------+-------------- C7 (28)
| |
| \-------------- C8 (29)
|
\-------------------------------------------------------- C9 (30)
Phylogram (based on average branch lengths):
/- C1 (1)
|
|- C2 (10)
|
| /- C21 (11)
| /+
| |\- C25 (15)
| |
|-+ C22 (12)
| |
| \ C26 (16)
|
|/- C10 (2)
||
||- C11 (3)
||
|| /- C12 (4)
|| |
+| /+- C37 (23)
|| ||
|| /--+\- C38 (24)
|| | |
||---------------------------------------------------------------+ \ C30 (18)
|| |
|| \ C35 (22)
||
||- C14 (5)
||
||- C15 (6)
||
||- C16 (7)
||
||- C18 (8)
||
||-- C19 (9)
\+
|- C23 (13)
|
|- C24 (14)
|
|- C28 (17)
|
| /- C31 (19)
|--+
| \- C4 (25)
|
| /- C33 (20)
|-+
| \- C34 (21)
|
|- C5 (26)
|
| /- C6 (27)
| |
|-+- C7 (28)
| |
| \- C8 (29)
|
\- C9 (30)
|---------------| 0.010 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Wed Nov 23 21:53:42 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.15 sec, SCORE=1000, Nseq=38, Len=374
C1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C2 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C3 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C4 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C5 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C6 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFP
C7 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFP
C8 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFP
C9 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C10 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C11 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C12 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C13 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C14 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C15 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C16 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C17 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C18 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C19 SLENVVYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C20 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C21 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C22 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C23 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C24 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C25 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C26 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C27 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C28 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C29 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C30 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C31 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C32 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C33 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C34 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C35 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C36 SLENVIYNLFNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFP
C37 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
C38 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLP
*****:***.*.****** *******:*********************:*
C1 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C2 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C3 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C4 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C5 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C6 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C7 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C8 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C9 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C10 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C11 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C12 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C13 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C14 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C15 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C16 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C17 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C18 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C19 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C20 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C21 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C22 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C23 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C24 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C25 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C26 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C27 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C28 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C29 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C30 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C31 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C32 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C33 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C34 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C35 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C36 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C37 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
C38 TNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYG
**************************************************
C1 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C2 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C3 VCKYTDLQFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C4 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C5 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C6 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C7 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C8 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C9 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C10 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C11 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C12 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C13 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C14 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C15 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C16 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C17 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C18 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C19 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C20 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C21 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C22 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C23 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C24 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C25 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C26 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C27 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C28 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C29 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C30 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C31 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C32 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C33 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C34 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C35 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C36 VCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKG
C37 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
C38 VCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKG
*******:******:******.***************** *** ******
C1 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C2 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C3 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C4 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C5 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C6 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C7 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C8 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C9 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C10 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C11 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C12 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C13 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C14 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C15 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C16 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C17 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C18 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C19 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C20 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C21 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C22 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C23 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C24 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C25 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C26 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C27 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C28 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C29 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C30 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C31 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C32 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C33 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C34 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C35 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C36 PQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQG
C37 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
C38 PQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQG
*****************:******************:***..********
C1 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C2 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C3 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C4 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C5 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C6 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C7 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C8 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C9 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C10 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C11 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C12 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C13 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C14 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C15 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C16 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C17 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C18 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C19 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C20 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C21 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C22 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C23 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C24 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C25 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C26 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C27 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C28 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C29 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C30 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C31 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C32 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C33 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C34 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C35 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C36 NLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFI
C37 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
C38 NLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFI
*********. *****:************:**************:*.***
C1 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C2 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C3 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRQKKSNLLIQEFLQYD
C4 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRKKKSNLLIQEFLQYD
C5 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C6 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C7 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C8 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C9 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C10 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C11 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C12 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C13 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C14 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C15 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C16 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C17 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C18 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C19 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C20 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C21 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C22 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C23 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C24 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C25 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C26 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C27 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C28 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C29 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C30 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C31 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRKKKSNLLIQEFLQYD
C32 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C33 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C34 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C35 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C36 AKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
C37 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
C38 AKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
*******************:*************** *****:********
C1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C2 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C3 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C4 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C5 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C6 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C7 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C8 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C9 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C10 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C11 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C12 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
C13 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C14 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C15 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C16 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C17 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C18 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C19 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C20 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
C21 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C22 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C23 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C24 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C25 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C26 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C27 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C28 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C29 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C30 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
C31 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C32 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C33 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C34 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C35 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLSCVSKVVNINV
C36 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINV
C37 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
C38 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINV
******************************* *******.**********
C1 DFKDFQFMLWCNDNKIMTFYPKMQ
C2 DFKDFQFMLWCNDNKIMTFYPKMQ
C3 DFKDFQFMLWCNDNKIMTFYPKMQ
C4 DFKDFQFMLWCNDNKIMTFYPKMQ
C5 DFKDFQFMLWCNDNKIMTFYPKMQ
C6 DFKDFQFMLWCNDNKIMTFYPKMQ
C7 DFKDFQFMLWCNDNKIMTFYPKMQ
C8 DFKDFQFMLWCNDNKIMTFYPKMQ
C9 DFKDFQFMLWCNDNKIMTFYPKMQ
C10 DFKDFQFMLWCNDNKIMTFYPKMQ
C11 DFKDFQFMLWCNDNKIMTFYPKMQ
C12 DFKDFQFMLWCNDNKIMTFYPKMQ
C13 DFKDFQFMLWCNDNKIMTFYPKMQ
C14 DFKDFQFMLWCNDNKIMTFYPKMQ
C15 DFKDFQFMLWCNDNKIMTFYPKMQ
C16 DFKDFQFMLWCNDNKIMTFYPKMQ
C17 DFKDFQFMLWCNDNKIMTFYPKMQ
C18 DFKDFQFMLWCNDNKIMTFYPKMQ
C19 DFKDFQFMLWCNDNKIMTFYPKMQ
C20 DFKDFQFMLWCNDNKIMTFYPKMQ
C21 DFKDFQFMLWCNDHKIMTFYPKMQ
C22 DFKDFQFMLWCNDNKIMTFYPKMQ
C23 DFKDFQFMLWCNDNKIMTFYPKMQ
C24 DFKDFQFMLWCNDNKIMTFYPKMQ
C25 DFKDFQFMLWCNDHKIMTFYPKMQ
C26 DFKDFQFMLWCNDNKIMTFYPKMQ
C27 DFKDFQFMLWCNDNKIMTFYPKMQ
C28 DFKDFQFMLWCNDNKIMTFYPKMQ
C29 DFKDFQFMLWCNDNKIMTFYPKMQ
C30 DFKDFQFMLWCNDNKIMTFYPKMQ
C31 DFKDFQFMLWCNDNKIMTFYPKMQ
C32 DFKDFQFMLWCNDNKIMTFYPKMQ
C33 DFKDFQFMLWCNDNKIMTFYPKMQ
C34 DFKDFQFMLWCNDNKIMTFYPKMQ
C35 DFKDFQFMLWCNDNKIMTFYPKMQ
C36 DFKDFQFMLWCNDNKIMTFYPKMQ
C37 DFKDFQFMLWCNDNKIMTFYPKMQ
C38 DFKDFQFMLWCNDNKIMTFYPKMQ
*************:**********
-- Starting log on Wed Nov 23 23:59:44 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result/original_alignment/codeml,BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C14 1122 sites
reading seq# 2 C19 1122 sites
reading seq# 3 C11 1122 sites
reading seq# 4 C24 1122 sites
reading seq# 5 C9 1122 sites
reading seq# 6 C15 1122 sites
reading seq# 7 C30 1122 sites
reading seq# 8 C5 1122 sites
reading seq# 9 C2 1122 sites
reading seq#10 C33 1122 sites
reading seq#11 C38 1122 sites
reading seq#12 C22 1122 sites
reading seq#13 C18 1122 sites
reading seq#14 C16 1122 sites
reading seq#15 C12 1122 sites
reading seq#16 C7 1122 sites
reading seq#17 C8 1122 sites
reading seq#18 C35 1122 sites
reading seq#19 C10 1122 sites
reading seq#20 C37 1122 sites
reading seq#21 C23 1122 sites
reading seq#22 C21 1122 sites
reading seq#23 C26 1122 sites
reading seq#24 C1 1122 sites
reading seq#25 C28 1122 sites
reading seq#26 C31 1122 sites
reading seq#27 C6 1122 sites
reading seq#28 C25 1122 sites
reading seq#29 C34 1122 sites
reading seq#30 C4 1122 sitesns = 30 ls = 1122
Reading sequences, sequential format..
Reading seq # 1: C14
Reading seq # 2: C19
Reading seq # 3: C11
Reading seq # 4: C24
Reading seq # 5: C9
Reading seq # 6: C15
Reading seq # 7: C30
Reading seq # 8: C5
Reading seq # 9: C2
Reading seq #10: C33
Reading seq #11: C38
Reading seq #12: C22
Reading seq #13: C18
Reading seq #14: C16
Reading seq #15: C12
Reading seq #16: C7
Reading seq #17: C8
Reading seq #18: C35
Reading seq #19: C10
Reading seq #20: C37
Reading seq #21: C23
Reading seq #22: C21
Reading seq #23: C26
Reading seq #24: C1
Reading seq #25: C28
Reading seq #26: C31
Reading seq #27: C6
Reading seq #28: C25
Reading seq #29: C34
Reading seq #30: C4
Sequences read..
Counting site patterns.. 0:00
Compressing, 107 patterns at 374 / 374 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 107 patterns at 374 / 374 sites (100.0%), 0:00
Counting codons..
3480 bytes for distance
104432 bytes for conP
9416 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(24, 9, ((22, 28), 12, 23), (19, 3, (((15, 20, 11), 7), 18), 1, 6, 14, 13, 2, 21, 4, 25, (26, 30), (10, 29), 8, (27, 16, 17), 5)); MP score: 70
522160 bytes for conP, adjusted
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
34
0.082411 0.084865 0.031495 0.078947 0.023008 0.043876 0.097680 0.083289 0.096580 0.018116 0.041367 0.014769 0.065857 0.094141 0.045859 0.032682 0.033912 0.073748 0.101937 0.101708 0.096672 0.086657 0.038841 0.027791 0.016034 0.102327 0.050066 0.107988 0.030768 0.064321 0.018673 0.055218 0.097407 0.045673 0.021803 0.033855 0.028302 0.098686 0.069070 0.300000 0.528352 0.395157
ntime & nrate & np: 39 2 42
Bounds (np=42):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 8.526652
np = 42
lnL0 = -2625.004384
Iterating by ming2
Initial: fx= 2625.004384
x= 0.08241 0.08486 0.03150 0.07895 0.02301 0.04388 0.09768 0.08329 0.09658 0.01812 0.04137 0.01477 0.06586 0.09414 0.04586 0.03268 0.03391 0.07375 0.10194 0.10171 0.09667 0.08666 0.03884 0.02779 0.01603 0.10233 0.05007 0.10799 0.03077 0.06432 0.01867 0.05522 0.09741 0.04567 0.02180 0.03385 0.02830 0.09869 0.06907 0.30000 0.52835 0.39516
1 h-m-p 0.0000 0.0001 4170.4620 ++ 2340.816466 m 0.0001 47 | 1/42
2 h-m-p 0.0000 0.0000 1875.0087 ++ 2320.673952 m 0.0000 92 | 2/42
3 h-m-p 0.0000 0.0000 72648.3954 ++ 2277.000388 m 0.0000 137 | 3/42
4 h-m-p 0.0000 0.0000 745850.6626 ++ 2230.347397 m 0.0000 182 | 4/42
5 h-m-p 0.0000 0.0000 66729.0842 ++ 2208.576839 m 0.0000 227 | 5/42
6 h-m-p 0.0000 0.0000 5564914.4981 ++ 2197.466944 m 0.0000 272 | 6/42
7 h-m-p 0.0000 0.0000 63480.6171 ++ 2187.631453 m 0.0000 317 | 7/42
8 h-m-p 0.0000 0.0000 63617.1802 ++ 2184.280007 m 0.0000 362 | 8/42
9 h-m-p 0.0000 0.0000 61724.7074 ++ 2147.094041 m 0.0000 407 | 9/42
10 h-m-p 0.0000 0.0000 720648.8590 ++ 2129.240652 m 0.0000 452 | 10/42
11 h-m-p 0.0000 0.0000 33351.7093 ++ 2112.610955 m 0.0000 497 | 11/42
12 h-m-p 0.0000 0.0000 11878.6037 ++ 2103.524868 m 0.0000 542 | 12/42
13 h-m-p 0.0000 0.0000 150401.9676 ++ 2100.197185 m 0.0000 587 | 13/42
14 h-m-p 0.0000 0.0000 55833.6620 ++ 2074.046557 m 0.0000 632 | 14/42
15 h-m-p 0.0000 0.0000 5935148.7226 ++ 2044.331560 m 0.0000 677 | 15/42
16 h-m-p 0.0000 0.0000 255361.1620 ++ 1997.650470 m 0.0000 722 | 16/42
17 h-m-p 0.0000 0.0000 21393.4030 ++ 1971.919439 m 0.0000 767 | 17/42
18 h-m-p 0.0000 0.0000 11336.3461 ++ 1951.220352 m 0.0000 812 | 18/42
19 h-m-p 0.0000 0.0000 13149.3213 ++ 1911.681545 m 0.0000 857 | 19/42
20 h-m-p 0.0000 0.0000 13060.1899 ++ 1908.633362 m 0.0000 902 | 20/42
21 h-m-p 0.0000 0.0000 3240.6759 ++ 1901.962098 m 0.0000 947 | 21/42
22 h-m-p 0.0000 0.0000 16980.1279 ++ 1895.855668 m 0.0000 992 | 22/42
23 h-m-p 0.0000 0.0000 14750.4366 ++ 1867.638650 m 0.0000 1037 | 23/42
24 h-m-p 0.0000 0.0000 8215.0151 ++ 1866.358195 m 0.0000 1082 | 24/42
25 h-m-p 0.0000 0.0000 4806.8395 ++ 1865.886127 m 0.0000 1127 | 25/42
26 h-m-p 0.0000 0.0000 4718.8048 ++ 1864.325743 m 0.0000 1172 | 26/42
27 h-m-p 0.0000 0.0000 3366.7089 ++ 1860.282771 m 0.0000 1217 | 27/42
28 h-m-p 0.0000 0.0000 2975.0010 ++ 1859.782488 m 0.0000 1262 | 28/42
29 h-m-p 0.0000 0.0000 1121.8340 ++ 1858.822065 m 0.0000 1307 | 29/42
30 h-m-p 0.0000 0.0018 100.2053 +++YCYYCCC 1836.361346 6 0.0016 1365 | 29/42
31 h-m-p 0.0004 0.0019 233.8229 ++ 1802.669996 m 0.0019 1410 | 29/42
32 h-m-p 0.0000 0.0000 6.7698
h-m-p: 0.00000000e+00 0.00000000e+00 6.76979026e+00 1802.669996
.. | 29/42
33 h-m-p 0.0000 0.0000 681.1351 +YYCYYC 1794.281962 5 0.0000 1505 | 29/42
34 h-m-p 0.0000 0.0000 2065.0903 +YYYYY 1789.464401 4 0.0000 1555 | 29/42
35 h-m-p 0.0000 0.0000 798.6124 +YYYCCC 1787.458066 5 0.0000 1608 | 29/42
36 h-m-p 0.0000 0.0000 686.3313 +YYCCCC 1786.564994 5 0.0000 1662 | 29/42
37 h-m-p 0.0000 0.0000 539.7595 CYCCC 1786.400968 4 0.0000 1714 | 29/42
38 h-m-p 0.0000 0.0002 194.7271 +CYCCC 1785.080978 4 0.0001 1768 | 29/42
39 h-m-p 0.0000 0.0000 2291.8821 +YCYCCC 1781.168840 5 0.0000 1822 | 29/42
40 h-m-p 0.0000 0.0000 5570.5609 CCCCC 1779.637457 4 0.0000 1875 | 29/42
41 h-m-p 0.0000 0.0001 787.7811 YCYC 1779.137043 3 0.0000 1924 | 29/42
42 h-m-p 0.0000 0.0001 344.0108 YCCCC 1778.596295 4 0.0000 1976 | 29/42
43 h-m-p 0.0001 0.0006 109.2200 CYCC 1778.401240 3 0.0001 2026 | 29/42
44 h-m-p 0.0002 0.0161 39.4754 +++YCCC 1773.593084 3 0.0083 2079 | 29/42
45 h-m-p 0.0007 0.0086 443.5156 +YCCCCC 1763.262087 5 0.0020 2134 | 29/42
46 h-m-p 0.0980 0.4901 0.2017 +YYYCCC 1761.532420 5 0.3488 2187 | 29/42
47 h-m-p 0.2375 8.0000 0.2961 +YCCCC 1758.762793 4 1.6030 2253 | 29/42
48 h-m-p 0.3891 1.9453 0.2457 +YCYCCC 1757.858216 5 1.1208 2320 | 29/42
49 h-m-p 0.6969 4.2449 0.3951 CYC 1757.263474 2 0.8181 2381 | 29/42
50 h-m-p 0.3732 1.8662 0.3009 CCCC 1756.962795 3 0.6336 2445 | 29/42
51 h-m-p 0.9331 8.0000 0.2043 YCCC 1756.640047 3 1.8224 2508 | 29/42
52 h-m-p 1.5805 7.9027 0.1335 CCC 1756.527652 2 1.6403 2570 | 29/42
53 h-m-p 1.6000 8.0000 0.0637 CYC 1756.479682 2 1.7968 2631 | 29/42
54 h-m-p 1.6000 8.0000 0.0488 CC 1756.439721 1 2.3815 2691 | 29/42
55 h-m-p 1.6000 8.0000 0.0315 CCC 1756.411550 2 1.8841 2753 | 29/42
56 h-m-p 1.6000 8.0000 0.0222 CC 1756.408893 1 1.3531 2813 | 29/42
57 h-m-p 1.6000 8.0000 0.0016 C 1756.408683 0 1.8051 2871 | 29/42
58 h-m-p 1.6000 8.0000 0.0018 YC 1756.408486 1 3.9032 2930 | 29/42
59 h-m-p 1.6000 8.0000 0.0018 YC 1756.408220 1 3.9688 2989 | 29/42
60 h-m-p 1.6000 8.0000 0.0023 C 1756.408139 0 1.4939 3047 | 29/42
61 h-m-p 1.6000 8.0000 0.0016 C 1756.408121 0 1.9637 3105 | 29/42
62 h-m-p 1.6000 8.0000 0.0003 C 1756.408119 0 1.3262 3163 | 29/42
63 h-m-p 1.6000 8.0000 0.0001 C 1756.408119 0 1.6000 3221 | 29/42
64 h-m-p 1.6000 8.0000 0.0000 C 1756.408119 0 1.6000 3279 | 29/42
65 h-m-p 0.2721 8.0000 0.0001 --C 1756.408119 0 0.0043 3339 | 29/42
66 h-m-p 0.0367 8.0000 0.0000 -------C 1756.408119 0 0.0000 3404
Out..
lnL = -1756.408119
3405 lfun, 10215 eigenQcodon, 265590 P(t)
end of tree file.
Time used: 2:12
Model 2: PositiveSelection
TREE # 1
(24, 9, ((22, 28), 12, 23), (19, 3, (((15, 20, 11), 7), 18), 1, 6, 14, 13, 2, 21, 4, 25, (26, 30), (10, 29), 8, (27, 16, 17), 5)); MP score: 70
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
34
0.047601 0.104535 0.052010 0.032358 0.047578 0.076939 0.093350 0.080910 0.108415 0.057883 0.041792 0.025786 0.056463 0.062652 0.097834 0.083261 0.083148 0.103352 0.017099 0.106787 0.103565 0.079070 0.028056 0.086476 0.023557 0.082728 0.048076 0.083247 0.088734 0.079319 0.108771 0.039832 0.063862 0.085229 0.076542 0.085824 0.066059 0.053308 0.029281 4.208603 0.989526 0.301200 0.233601 1.339435
ntime & nrate & np: 39 3 44
Bounds (np=44):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 3.281386
np = 44
lnL0 = -2499.345784
Iterating by ming2
Initial: fx= 2499.345784
x= 0.04760 0.10454 0.05201 0.03236 0.04758 0.07694 0.09335 0.08091 0.10842 0.05788 0.04179 0.02579 0.05646 0.06265 0.09783 0.08326 0.08315 0.10335 0.01710 0.10679 0.10357 0.07907 0.02806 0.08648 0.02356 0.08273 0.04808 0.08325 0.08873 0.07932 0.10877 0.03983 0.06386 0.08523 0.07654 0.08582 0.06606 0.05331 0.02928 4.20860 0.98953 0.30120 0.23360 1.33943
1 h-m-p 0.0000 0.0001 2624.5130 ++ 2199.772410 m 0.0001 49 | 1/44
2 h-m-p 0.0000 0.0000 1598.4337 ++ 2183.092011 m 0.0000 96 | 2/44
3 h-m-p 0.0000 0.0000 3241.3732 ++ 2157.136617 m 0.0000 143 | 3/44
4 h-m-p 0.0000 0.0000 1701.8349 ++ 2150.277204 m 0.0000 190 | 4/44
5 h-m-p 0.0000 0.0004 293.6693 ++ 2108.600773 m 0.0004 237 | 5/44
6 h-m-p 0.0000 0.0000 1363.5227 ++ 2100.445867 m 0.0000 284 | 6/44
7 h-m-p 0.0000 0.0000 45984.0408 ++ 2073.935871 m 0.0000 331 | 7/44
8 h-m-p 0.0000 0.0000 6838.2016 ++ 2069.670901 m 0.0000 378 | 8/44
9 h-m-p 0.0000 0.0000 9894.4269 ++ 2067.719335 m 0.0000 425 | 9/44
10 h-m-p 0.0000 0.0000 4071.2162 ++ 2059.024430 m 0.0000 472 | 10/44
11 h-m-p 0.0000 0.0000 16736.0627 ++ 2036.785444 m 0.0000 519 | 11/44
12 h-m-p 0.0000 0.0000 8173.4992 ++ 2016.045116 m 0.0000 566 | 12/44
13 h-m-p 0.0000 0.0000 15729.9527 ++ 2015.913528 m 0.0000 613 | 13/44
14 h-m-p 0.0000 0.0000 5487.7749 ++ 1970.439501 m 0.0000 660 | 14/44
15 h-m-p 0.0000 0.0000 13651.3672 ++ 1964.893780 m 0.0000 707 | 15/44
16 h-m-p 0.0000 0.0000 5829.3557 ++ 1962.596636 m 0.0000 754 | 16/44
17 h-m-p 0.0000 0.0000 246449.1784 ++ 1962.276589 m 0.0000 801 | 17/44
18 h-m-p 0.0000 0.0000 5580.2337 ++ 1956.452330 m 0.0000 848 | 18/44
19 h-m-p 0.0000 0.0000 102793877.1490
h-m-p: 1.02602908e-11 5.13014539e-11 1.02793877e+08 1956.452330
.. | 18/44
20 h-m-p 0.0000 0.0000 957.5649 ++ 1953.793530 m 0.0000 939 | 19/44
21 h-m-p 0.0000 0.0000 817482.9083 ++ 1952.989697 m 0.0000 986 | 20/44
22 h-m-p 0.0000 0.0000 2361.9820 ++ 1942.897758 m 0.0000 1033 | 21/44
23 h-m-p 0.0000 0.0000 16924.9433 ++ 1938.507928 m 0.0000 1080 | 22/44
24 h-m-p 0.0000 0.0000 4202.4981 ++ 1937.179284 m 0.0000 1127 | 23/44
25 h-m-p 0.0000 0.0000 26546.5304 ++ 1908.500314 m 0.0000 1174 | 24/44
26 h-m-p 0.0000 0.0000 12102.8417 ++ 1899.469066 m 0.0000 1221 | 25/44
27 h-m-p 0.0000 0.0000 58313.6412 ++ 1894.973161 m 0.0000 1268 | 26/44
28 h-m-p 0.0000 0.0000 18603.2055 ++ 1883.391808 m 0.0000 1315 | 27/44
29 h-m-p 0.0000 0.0000 18374.8046 ++ 1875.903998 m 0.0000 1362 | 28/44
30 h-m-p 0.0000 0.0000 10758.3291 ++ 1870.033039 m 0.0000 1409 | 29/44
31 h-m-p 0.0000 0.0000 4169.2494 ++ 1834.816979 m 0.0000 1456 | 30/44
32 h-m-p 0.0000 0.0000 562.9458 +YCYYCYCCC 1824.920572 8 0.0000 1516 | 30/44
33 h-m-p 0.0000 0.0001 720.3309 +CYCYYYYYC 1808.604326 8 0.0001 1574 | 30/44
34 h-m-p 0.0000 0.0000 1586.6045 +YCYYYYCCCC 1793.561541 10 0.0000 1636 | 30/44
35 h-m-p 0.0000 0.0000 760.7203 +YYYYC 1790.937016 4 0.0000 1688 | 30/44
36 h-m-p 0.0000 0.0000 2279.2121 +YYYYCYCCC 1786.113556 8 0.0000 1747 | 30/44
37 h-m-p 0.0000 0.0000 650.5598 +YYCYC 1784.778568 4 0.0000 1800 | 30/44
38 h-m-p 0.0000 0.0001 473.1953 +YYYCCC 1780.533038 5 0.0001 1855 | 30/44
39 h-m-p 0.0000 0.0000 2510.8117 YCYCCC 1779.875115 5 0.0000 1910 | 30/44
40 h-m-p 0.0001 0.0003 60.7735 CCCC 1779.560695 3 0.0001 1963 | 30/44
41 h-m-p 0.0002 0.0074 41.0033 ++CYYCCC 1775.547012 5 0.0049 2021 | 30/44
42 h-m-p 0.0055 0.0273 29.6738 ++ 1766.742230 m 0.0273 2068 | 30/44
43 h-m-p 0.0545 0.2725 2.2346 +YCYCCC 1759.069528 5 0.1672 2124 | 29/44
44 h-m-p 0.0311 0.1557 6.4620 --CCC 1759.055652 2 0.0005 2177 | 29/44
45 h-m-p 0.0030 0.6300 0.9907 ++CCCC 1758.153366 3 0.0708 2232 | 29/44
46 h-m-p 0.1344 2.0878 0.5217 +CYCCC 1757.395486 4 0.9541 2303 | 29/44
47 h-m-p 0.8203 4.1013 0.5175 CYCC 1757.108300 3 0.6147 2370 | 29/44
48 h-m-p 0.6189 3.0947 0.4810 CC 1756.826419 1 0.6851 2434 | 29/44
49 h-m-p 0.6386 3.1931 0.3466 YCCC 1756.679611 3 0.4417 2501 | 29/44
50 h-m-p 0.8553 8.0000 0.1790 YCCC 1756.472559 3 1.3307 2568 | 29/44
51 h-m-p 0.7746 3.8730 0.1505 CCCC 1756.415432 3 0.8995 2636 | 29/44
52 h-m-p 1.3462 8.0000 0.1006 CC 1756.390998 1 1.2680 2700 | 29/44
53 h-m-p 1.6000 8.0000 0.0346 CC 1756.376243 1 1.3838 2764 | 29/44
54 h-m-p 1.6000 8.0000 0.0222 CC 1756.369101 1 1.3998 2828 | 29/44
55 h-m-p 1.6000 8.0000 0.0182 YC 1756.366555 1 1.1562 2891 | 29/44
56 h-m-p 1.5534 8.0000 0.0135 CC 1756.365365 1 2.0320 2955 | 29/44
57 h-m-p 1.6000 8.0000 0.0135 Y 1756.365321 0 0.6489 3017 | 29/44
58 h-m-p 1.6000 8.0000 0.0037 -------C 1756.365321 0 0.0000 3086 | 29/44
59 h-m-p 0.0000 0.0041 620.8388 +YC 1756.364769 1 0.0001 3150 | 29/44
60 h-m-p 1.2741 8.0000 0.0428 ++ 1756.359586 m 8.0000 3197 | 29/44
61 h-m-p 1.3566 8.0000 0.2526 CC 1756.354234 1 1.9871 3261 | 29/44
62 h-m-p 1.6000 8.0000 0.0167 YC 1756.353095 1 1.1753 3324 | 29/44
63 h-m-p 0.2737 8.0000 0.0719 +YC 1756.352027 1 2.4389 3388 | 29/44
64 h-m-p 1.6000 8.0000 0.0240 ++ 1756.344887 m 8.0000 3450 | 29/44
65 h-m-p 0.5672 8.0000 0.3390 +Y 1756.325487 0 1.7716 3513 | 29/44
66 h-m-p 1.6000 8.0000 0.3527 YCC 1756.315768 2 1.1663 3578 | 29/44
67 h-m-p 1.6000 8.0000 0.1149 CY 1756.311389 1 1.4146 3642 | 29/44
68 h-m-p 0.4561 8.0000 0.3563 C 1756.310370 0 0.4728 3704 | 29/44
69 h-m-p 0.7611 8.0000 0.2214 YC 1756.306283 1 1.8547 3767 | 29/44
70 h-m-p 1.6000 8.0000 0.1172 YC 1756.300875 1 3.5081 3830 | 29/44
71 h-m-p 1.5588 8.0000 0.2637 YYC 1756.298844 2 1.1038 3894 | 29/44
72 h-m-p 1.6000 8.0000 0.0792 CC 1756.297882 1 0.5192 3958 | 29/44
73 h-m-p 0.3212 8.0000 0.1281 +CC 1756.297217 1 1.7028 4023 | 29/44
74 h-m-p 1.6000 8.0000 0.1092 YC 1756.296998 1 1.0831 4086 | 29/44
75 h-m-p 1.6000 8.0000 0.0132 YC 1756.296970 1 0.8845 4149 | 29/44
76 h-m-p 0.4966 8.0000 0.0235 Y 1756.296966 0 0.9490 4211 | 29/44
77 h-m-p 1.6000 8.0000 0.0018 Y 1756.296966 0 1.0680 4273 | 29/44
78 h-m-p 1.6000 8.0000 0.0003 -C 1756.296966 0 0.1000 4336 | 29/44
79 h-m-p 0.0204 8.0000 0.0016 +++Y 1756.296966 0 2.5340 4401 | 29/44
80 h-m-p 1.6000 8.0000 0.0016 ++ 1756.296964 m 8.0000 4463 | 29/44
81 h-m-p 1.6000 8.0000 0.0002 ++ 1756.296947 m 8.0000 4525 | 29/44
82 h-m-p 0.0314 8.0000 0.0545 +++C 1756.296685 0 2.0792 4590 | 29/44
83 h-m-p 1.1452 8.0000 0.0990 +C 1756.295902 0 4.8664 4653 | 29/44
84 h-m-p 1.6000 8.0000 0.2047 CC 1756.295417 1 1.3344 4717 | 29/44
85 h-m-p 1.6000 8.0000 0.1466 YC 1756.295012 1 2.9638 4780 | 29/44
86 h-m-p 1.6000 8.0000 0.1205 YC 1756.294839 1 0.8012 4843 | 29/44
87 h-m-p 0.1637 8.0000 0.5895 +C 1756.294605 0 0.7092 4906 | 29/44
88 h-m-p 1.0380 8.0000 0.4028 C 1756.294481 0 1.0516 4968 | 29/44
89 h-m-p 1.6000 8.0000 0.2376 Y 1756.294327 0 2.8257 5030 | 29/44
90 h-m-p 1.6000 8.0000 0.4028 Y 1756.294230 0 1.1815 5092 | 29/44
91 h-m-p 1.6000 8.0000 0.1680 Y 1756.294194 0 1.2754 5154 | 29/44
92 h-m-p 0.6515 8.0000 0.3289 +C 1756.294153 0 2.7423 5217 | 29/44
93 h-m-p 1.6000 8.0000 0.2625 C 1756.294131 0 2.0911 5279 | 29/44
94 h-m-p 1.2353 8.0000 0.4443 C 1756.294119 0 1.8355 5341 | 29/44
95 h-m-p 1.6000 8.0000 0.3327 Y 1756.294113 0 3.6635 5403 | 29/44
96 h-m-p 1.6000 8.0000 0.4079 C 1756.294111 0 1.5850 5465 | 29/44
97 h-m-p 1.6000 8.0000 0.3497 +Y 1756.294110 0 4.9782 5528 | 29/44
98 h-m-p 1.6000 8.0000 0.1300 Y 1756.294110 0 1.1413 5590 | 29/44
99 h-m-p 0.2569 8.0000 0.5774 Y 1756.294110 0 0.6170 5652 | 29/44
100 h-m-p 1.6000 8.0000 0.1265 Y 1756.294110 0 0.9166 5714 | 29/44
101 h-m-p 1.2353 8.0000 0.0939 Y 1756.294110 0 2.6733 5776 | 29/44
102 h-m-p 1.3350 8.0000 0.1879 Y 1756.294110 0 2.6109 5838 | 29/44
103 h-m-p 1.6000 8.0000 0.0409 Y 1756.294110 0 1.6000 5900 | 29/44
104 h-m-p 0.5568 8.0000 0.1175 ++ 1756.294110 m 8.0000 5962 | 29/44
105 h-m-p 0.2193 8.0000 4.2854 --C 1756.294110 0 0.0051 6026 | 29/44
106 h-m-p 0.9471 8.0000 0.0230 ----------------.. | 29/44
107 h-m-p 0.0004 0.1805 0.0463 ---C 1756.294110 0 0.0000 6152 | 29/44
108 h-m-p 0.0022 1.0887 0.0110 ------------.. | 29/44
109 h-m-p 0.0004 0.2171 0.0390 ---------C 1756.294110 0 0.0000 6295 | 29/44
110 h-m-p 0.0000 0.0104 0.8040 ----Y 1756.294110 0 0.0000 6361 | 29/44
111 h-m-p 0.0023 1.1647 0.0082 ------------.. | 29/44
112 h-m-p 0.0005 0.2287 0.0372 ----------- | 29/44
113 h-m-p 0.0005 0.2287 0.0372 -----------
Out..
lnL = -1756.294110
6576 lfun, 26304 eigenQcodon, 769392 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -1764.758802 S = -1685.311034 -76.797584
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 107 patterns 8:28
did 20 / 107 patterns 8:28
did 30 / 107 patterns 8:28
did 40 / 107 patterns 8:28
did 50 / 107 patterns 8:29
did 60 / 107 patterns 8:29
did 70 / 107 patterns 8:29
did 80 / 107 patterns 8:29
did 90 / 107 patterns 8:29
did 100 / 107 patterns 8:29
did 107 / 107 patterns 8:29end of tree file.
Time used: 8:29
Model 7: beta
TREE # 1
(24, 9, ((22, 28), 12, 23), (19, 3, (((15, 20, 11), 7), 18), 1, 6, 14, 13, 2, 21, 4, 25, (26, 30), (10, 29), 8, (27, 16, 17), 5)); MP score: 70
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
34
0.099784 0.020241 0.033005 0.074485 0.092019 0.014068 0.097766 0.100407 0.015590 0.086705 0.066464 0.049686 0.054732 0.088914 0.030224 0.089177 0.098231 0.015472 0.060593 0.099147 0.084018 0.071279 0.066199 0.049288 0.075314 0.078772 0.092678 0.018394 0.060498 0.025088 0.045537 0.093620 0.043898 0.022412 0.090662 0.060271 0.069690 0.029937 0.062153 4.257676 0.780562 1.860799
ntime & nrate & np: 39 1 42
Bounds (np=42):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 5.731309
np = 42
lnL0 = -2435.657735
Iterating by ming2
Initial: fx= 2435.657735
x= 0.09978 0.02024 0.03301 0.07448 0.09202 0.01407 0.09777 0.10041 0.01559 0.08671 0.06646 0.04969 0.05473 0.08891 0.03022 0.08918 0.09823 0.01547 0.06059 0.09915 0.08402 0.07128 0.06620 0.04929 0.07531 0.07877 0.09268 0.01839 0.06050 0.02509 0.04554 0.09362 0.04390 0.02241 0.09066 0.06027 0.06969 0.02994 0.06215 4.25768 0.78056 1.86080
1 h-m-p 0.0000 0.0001 1694.5370 ++ 2285.276144 m 0.0001 89 | 1/42
2 h-m-p 0.0000 0.0000 5248.7153 ++ 2271.482897 m 0.0000 176 | 2/42
3 h-m-p 0.0000 0.0000 1295.4299 +YYCYYCCC 2266.409692 7 0.0000 274 | 2/42
4 h-m-p 0.0000 0.0000 1317.8285 +YYYYYC 2262.093571 5 0.0000 365 | 2/42
5 h-m-p 0.0000 0.0000 1112.0930 +YYCYYCCC 2256.706934 7 0.0000 461 | 2/42
6 h-m-p 0.0000 0.0001 629.9261 ++ 2242.809591 m 0.0001 546 | 2/42
7 h-m-p 0.0000 0.0000 1143.0799 +YYYCYCYC 2237.886017 7 0.0000 642 | 2/42
8 h-m-p 0.0000 0.0000 1656.8320 ++ 2231.198153 m 0.0000 727 | 2/42
9 h-m-p 0.0000 0.0000 2070.8775
h-m-p: 2.51903573e-20 1.25951787e-19 2.07087750e+03 2231.198153
.. | 2/42
10 h-m-p 0.0000 0.0000 1788.9314 ++ 2198.015256 m 0.0000 894 | 3/42
11 h-m-p 0.0000 0.0000 3535.3021 ++ 2184.192728 m 0.0000 979 | 4/42
12 h-m-p 0.0000 0.0000 15612.8549 ++ 2165.159963 m 0.0000 1063 | 5/42
13 h-m-p 0.0000 0.0000 7826.6822 ++ 2140.894053 m 0.0000 1146 | 6/42
14 h-m-p 0.0000 0.0000 2227.3584 ++ 2130.370069 m 0.0000 1228 | 7/42
15 h-m-p 0.0000 0.0000 5964.3223 +CYYYYYY 2110.485251 6 0.0000 1318 | 7/42
16 h-m-p 0.0000 0.0000 9800.3715 ++ 2091.645487 m 0.0000 1398 | 7/42
17 h-m-p 0.0000 0.0001 751.6455 +CYYCYCCC 2047.938577 7 0.0001 1491 | 7/42
18 h-m-p 0.0000 0.0000 5315.3193 ++ 1993.619941 m 0.0000 1571 | 8/42
19 h-m-p 0.0000 0.0000 183589.8400 ++ 1956.972019 m 0.0000 1651 | 8/42
20 h-m-p 0.0000 0.0000 2483.7080 ++ 1948.491869 m 0.0000 1730 | 9/42
21 h-m-p 0.0000 0.0000 519.4891 +YCYYYCCYCY 1939.086767 10 0.0000 1824 | 9/42
22 h-m-p 0.0000 0.0000 641.2609 +YYYYYCYC
a 0.000009 0.000009 0.000009 0.000009
f 1936.808161 1936.808111 1936.808176 1936.808284
8.915039e-06 1936.808161
8.917777e-06 1936.807644
8.920515e-06 1936.808208
8.923253e-06 1936.808000
8.925991e-06 1936.808087
8.928729e-06 1936.808220
8.931466e-06 1936.808227
8.934204e-06 1936.808209
8.936942e-06 1936.808194
8.939680e-06 1936.807996
8.942418e-06 1936.808133
8.945156e-06 1936.808078
8.947894e-06 1936.808110
8.950632e-06 1936.808216
8.953370e-06 1936.808437
8.956108e-06 1936.808457
8.958846e-06 1936.808293
8.961584e-06 1936.808058
8.964322e-06 1936.808458
8.967060e-06 1936.807956
Linesearch2 a4: multiple optima?
YC 1936.807879 10 0.0000 1935 | 9/42
23 h-m-p 0.0000 0.0000 916.4946 ++ 1931.405756 m 0.0000 2013 | 10/42
24 h-m-p 0.0000 0.0001 587.3462 ++ 1920.411512 m 0.0001 2091 | 11/42
25 h-m-p 0.0000 0.0000 10613.7140 ++ 1899.757742 m 0.0000 2168 | 12/42
26 h-m-p 0.0000 0.0000 743.7100 ++ 1898.037149 m 0.0000 2244 | 13/42
27 h-m-p 0.0000 0.0000 119275.6519 ++ 1882.686109 m 0.0000 2319 | 14/42
28 h-m-p 0.0000 0.0000 9553.1894 ++ 1879.761083 m 0.0000 2393 | 15/42
29 h-m-p 0.0000 0.0000 62184.6940 ++ 1874.190930 m 0.0000 2466 | 16/42
30 h-m-p 0.0000 0.0001 243.3883 ++ 1858.752544 m 0.0001 2538 | 17/42
31 h-m-p 0.0001 0.0003 89.7423 ++ 1851.386035 m 0.0003 2609 | 18/42
32 h-m-p 0.0000 0.0001 149.8587 ++ 1842.605541 m 0.0001 2679 | 19/42
33 h-m-p 0.0000 0.0000 199.8810 ++ 1838.394571 m 0.0000 2748 | 20/42
34 h-m-p 0.0000 0.0000 434.7983 ++ 1832.965888 m 0.0000 2816 | 21/42
35 h-m-p 0.0000 0.0000 2858.3726 ++ 1825.515630 m 0.0000 2883 | 22/42
36 h-m-p 0.0000 0.0000 192.7226 ++ 1821.198586 m 0.0000 2949 | 23/42
37 h-m-p 0.0000 0.0000 153.5381 ++ 1816.526783 m 0.0000 3014 | 24/42
38 h-m-p 0.0000 0.0001 41.0747 ++ 1814.845840 m 0.0001 3078 | 25/42
39 h-m-p 0.0000 0.0001 96.7484 ++ 1810.782208 m 0.0001 3141 | 26/42
40 h-m-p 0.0000 0.0002 42.5008 ++ 1808.394673 m 0.0002 3203 | 27/42
41 h-m-p 0.0000 0.0000 229.3339 ++ 1805.935738 m 0.0000 3264 | 27/42
42 h-m-p 0.0000 0.0000 350.8859
h-m-p: 1.44828400e-21 7.24142002e-21 3.50885859e+02 1805.935738
.. | 27/42
43 h-m-p 0.0000 0.0000 424496.0835 --CYYCYCCCC 1788.270956 8 0.0000 3397 | 27/42
44 h-m-p 0.0000 0.0000 1486.8870 YYYYYYC 1784.947451 6 0.0000 3463 | 27/42
45 h-m-p 0.0000 0.0000 766.6416 +YCYYYCCCCC 1774.310872 9 0.0000 3538 | 27/42
46 h-m-p 0.0000 0.0000 8659.4869 +YYYCCC 1772.453453 5 0.0000 3606 | 27/42
47 h-m-p 0.0000 0.0000 3561.6849 ++ 1766.916830 m 0.0000 3666 | 28/42
48 h-m-p 0.0000 0.0000 1770.9218 ++ 1766.481924 m 0.0000 3726 | 29/42
49 h-m-p 0.0000 0.0058 41.0838 ++YCCC 1766.149032 3 0.0004 3792 | 29/42
50 h-m-p 0.0001 0.0008 243.8543 +YYYC 1764.815400 3 0.0002 3854 | 29/42
51 h-m-p 0.0001 0.0003 78.5037 CYCCC 1764.669340 4 0.0001 3919 | 29/42
52 h-m-p 0.0001 0.0005 137.4678 +CYYYC 1763.548513 4 0.0004 3983 | 29/42
53 h-m-p 0.0000 0.0001 2568.1967 +YCYCCC 1760.722540 5 0.0001 4050 | 29/42
54 h-m-p 0.0010 0.0050 59.4730 CYCCCC 1759.455158 5 0.0016 4117 | 29/42
55 h-m-p 0.0803 0.9122 1.1506 +CYC 1758.235189 2 0.4152 4179 | 29/42
56 h-m-p 0.4609 2.3045 0.4186 YCYCCC 1757.331797 5 1.0550 4245 | 29/42
57 h-m-p 0.4720 2.3601 0.1138 YCYCCC 1757.004716 5 1.1243 4311 | 29/42
58 h-m-p 0.3326 1.6631 0.2384 CYCCC 1756.825346 4 0.5232 4376 | 29/42
59 h-m-p 0.5199 3.1538 0.2399 CYC 1756.793519 2 0.4979 4437 | 29/42
60 h-m-p 0.4878 6.0093 0.2449 +YYCC 1756.714967 3 1.6941 4500 | 29/42
61 h-m-p 0.3883 1.9415 0.5621 YCYCYC 1756.638133 5 0.6113 4565 | 29/42
62 h-m-p 0.2799 1.3994 0.5217 CCC 1756.602630 2 0.3322 4627 | 29/42
63 h-m-p 0.6094 3.0469 0.1683 YYC 1756.563372 2 0.5241 4687 | 29/42
64 h-m-p 1.3656 8.0000 0.0646 YC 1756.553513 1 0.6431 4746 | 29/42
65 h-m-p 1.6000 8.0000 0.0159 YC 1756.551269 1 0.6584 4805 | 29/42
66 h-m-p 0.7413 8.0000 0.0141 CC 1756.550405 1 0.9491 4865 | 29/42
67 h-m-p 1.6000 8.0000 0.0022 C 1756.549971 0 1.8414 4923 | 29/42
68 h-m-p 1.6000 8.0000 0.0022 +C 1756.549085 0 5.8142 4982 | 29/42
69 h-m-p 1.6000 8.0000 0.0032 ++ 1756.542871 m 8.0000 5040 | 29/42
70 h-m-p 1.6000 8.0000 0.0055 CC 1756.536717 1 2.0419 5100 | 29/42
71 h-m-p 1.6000 8.0000 0.0030 +YC 1756.524890 1 5.3326 5160 | 29/42
72 h-m-p 1.5725 8.0000 0.0101 +YC 1756.512922 1 3.9376 5220 | 29/42
73 h-m-p 1.6000 8.0000 0.0089 YC 1756.500547 1 2.6871 5279 | 29/42
74 h-m-p 1.6000 8.0000 0.0147 YC 1756.491175 1 3.3775 5338 | 29/42
75 h-m-p 1.6000 8.0000 0.0121 CC 1756.488971 1 1.3556 5398 | 29/42
76 h-m-p 1.5841 8.0000 0.0104 Y 1756.488873 0 1.2278 5456 | 29/42
77 h-m-p 1.6000 8.0000 0.0017 Y 1756.488869 0 1.0837 5514 | 29/42
78 h-m-p 1.6000 8.0000 0.0001 Y 1756.488869 0 1.0396 5572 | 29/42
79 h-m-p 1.6000 8.0000 0.0000 Y 1756.488869 0 0.4000 5630 | 29/42
80 h-m-p 1.6000 8.0000 0.0000 --------------C 1756.488869 0 0.0000 5702
Out..
lnL = -1756.488869
5703 lfun, 62733 eigenQcodon, 2224170 P(t)
end of tree file.
Time used: 25:35
Model 8: beta&w>1
TREE # 1
(24, 9, ((22, 28), 12, 23), (19, 3, (((15, 20, 11), 7), 18), 1, 6, 14, 13, 2, 21, 4, 25, (26, 30), (10, 29), 8, (27, 16, 17), 5)); MP score: 70
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
34
0.060897 0.082162 0.034745 0.011977 0.073080 0.072435 0.023162 0.063329 0.016291 0.012244 0.102460 0.031315 0.085172 0.072386 0.079611 0.079577 0.100840 0.029950 0.062043 0.062691 0.019765 0.043528 0.087371 0.063047 0.043335 0.043568 0.031157 0.098340 0.076544 0.067546 0.078629 0.016849 0.059232 0.044655 0.021307 0.072702 0.068327 0.109689 0.014470 4.221196 0.900000 0.583060 1.545178 1.300000
ntime & nrate & np: 39 2 44
Bounds (np=44):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 4.930343
np = 44
lnL0 = -2348.701764
Iterating by ming2
Initial: fx= 2348.701764
x= 0.06090 0.08216 0.03474 0.01198 0.07308 0.07243 0.02316 0.06333 0.01629 0.01224 0.10246 0.03131 0.08517 0.07239 0.07961 0.07958 0.10084 0.02995 0.06204 0.06269 0.01976 0.04353 0.08737 0.06305 0.04334 0.04357 0.03116 0.09834 0.07654 0.06755 0.07863 0.01685 0.05923 0.04466 0.02131 0.07270 0.06833 0.10969 0.01447 4.22120 0.90000 0.58306 1.54518 1.30000
1 h-m-p 0.0000 0.0001 2095.7567 ++ 2190.567583 m 0.0001 93 | 1/44
2 h-m-p 0.0000 0.0000 1799.9426 ++ 2175.106688 m 0.0000 184 | 2/44
3 h-m-p 0.0000 0.0000 19091.7898 ++ 2158.045143 m 0.0000 274 | 3/44
4 h-m-p 0.0000 0.0000 8098.8859 ++ 2137.817261 m 0.0000 363 | 4/44
5 h-m-p 0.0000 0.0000 7297.6701 ++ 2114.430711 m 0.0000 451 | 5/44
6 h-m-p 0.0000 0.0000 1466.3549 ++ 2075.147466 m 0.0000 538 | 6/44
7 h-m-p 0.0000 0.0000 1317.4020 ++ 2071.003075 m 0.0000 624 | 7/44
8 h-m-p 0.0000 0.0000 33782.9396 ++ 2000.172256 m 0.0000 709 | 8/44
9 h-m-p 0.0000 0.0000 1433.6258 ++ 1998.699388 m 0.0000 793 | 9/44
10 h-m-p 0.0000 0.0000 85772.1775 ++ 1990.808598 m 0.0000 876 | 10/44
11 h-m-p 0.0000 0.0001 2509.3813 ++ 1919.764693 m 0.0001 958 | 11/44
12 h-m-p 0.0000 0.0000 17789.9059 ++ 1915.427080 m 0.0000 1039 | 12/44
13 h-m-p 0.0000 0.0000 46257.0217 ++ 1908.637312 m 0.0000 1119 | 13/44
14 h-m-p 0.0000 0.0000 15678.0177 ++ 1907.836861 m 0.0000 1198 | 14/44
15 h-m-p 0.0000 0.0000 440843.0104 ++ 1904.258866 m 0.0000 1276 | 15/44
16 h-m-p 0.0000 0.0000 12017.1302 ++ 1893.153464 m 0.0000 1353 | 16/44
17 h-m-p 0.0000 0.0000 48109.2732 ++ 1891.409779 m 0.0000 1429 | 17/44
18 h-m-p 0.0000 0.0000 11363.8343 ++ 1879.868610 m 0.0000 1504 | 18/44
19 h-m-p 0.0000 0.0000 166928.2893 ++ 1876.979290 m 0.0000 1578 | 19/44
20 h-m-p 0.0000 0.0000 16901.8524 ++ 1875.537420 m 0.0000 1651 | 20/44
21 h-m-p 0.0000 0.0000 57381.9586 ++ 1871.111231 m 0.0000 1723 | 21/44
22 h-m-p 0.0000 0.0000 15299.2929 ++ 1870.439939 m 0.0000 1794 | 22/44
23 h-m-p 0.0000 0.0000 6736.4663 ++ 1862.716627 m 0.0000 1864 | 23/44
24 h-m-p 0.0000 0.0000 4872.0666 ++ 1858.554626 m 0.0000 1933 | 24/44
25 h-m-p 0.0000 0.0000 115401.3628 ++ 1850.481132 m 0.0000 2001 | 25/44
26 h-m-p 0.0000 0.0000 2080.7219 ++ 1848.261223 m 0.0000 2068 | 26/44
27 h-m-p 0.0000 0.0000 2907.7037 ++ 1846.287227 m 0.0000 2134 | 27/44
28 h-m-p 0.0000 0.0002 307.4631 ++ 1835.777143 m 0.0002 2199 | 28/44
29 h-m-p 0.0000 0.0000 14505.4194 +YYYCYYCCC 1824.694193 8 0.0000 2276 | 28/44
30 h-m-p 0.0000 0.0001 271.1312 +YYCYC 1822.994906 4 0.0000 2345 | 28/44
31 h-m-p 0.0000 0.0000 348.7254 CYCCC 1822.590527 4 0.0000 2415 | 28/44
32 h-m-p 0.0000 0.0025 138.1017 ++++ 1787.707172 m 0.0025 2480 | 28/44
33 h-m-p 0.0000 0.0000 76.7058
h-m-p: 2.47841045e-20 1.23920522e-19 7.67058306e+01 1787.707172
.. | 28/44
34 h-m-p 0.0000 0.0000 770.8883 ++ 1786.773592 m 0.0000 2603 | 29/44
35 h-m-p 0.0000 0.0000 7130.2894 +CYCYCCC 1775.561658 6 0.0000 2677
QuantileBeta(0.15, 0.00495, 1.42825) = 1.909299e-162 2000 rounds
| 29/44
36 h-m-p 0.0000 0.0000 15977.4749 +YYYCYCCC 1769.891269 7 0.0000 2750
QuantileBeta(0.15, 0.00495, 1.42825) = 3.566281e-162 2000 rounds
| 29/44
37 h-m-p 0.0000 0.0000 1760.0795 +YCYCCC 1768.379743 5 0.0000 2821
QuantileBeta(0.15, 0.00495, 1.42825) = 3.708451e-162 2000 rounds
| 29/44
38 h-m-p 0.0000 0.0000 1621.1163 +YYCYC 1767.145406 4 0.0000 2889
QuantileBeta(0.15, 0.00495, 1.42825) = 3.820522e-162 2000 rounds
| 29/44
39 h-m-p 0.0000 0.0000 2217.0072 +YYYYCC 1764.694725 5 0.0000 2958
QuantileBeta(0.15, 0.00495, 1.42825) = 4.046512e-162 2000 rounds
| 29/44
40 h-m-p 0.0000 0.0000 570.8819 CYCCC 1764.456650 4 0.0000 3027
QuantileBeta(0.15, 0.00495, 1.42825) = 4.064097e-162 2000 rounds
| 29/44
41 h-m-p 0.0000 0.0000 561.4209 YCYCCC 1764.226282 5 0.0000 3097
QuantileBeta(0.15, 0.00495, 1.42825) = 4.068612e-162 2000 rounds
| 29/44
42 h-m-p 0.0000 0.0006 203.9857 ++CYCCC 1760.753638 4 0.0003 3168
QuantileBeta(0.15, 0.00495, 1.42825) = 1.895263e-162 2000 rounds
| 29/44
43 h-m-p 0.0000 0.0000 97.1280 CCC 1760.722626 2 0.0000 3234
QuantileBeta(0.15, 0.00495, 1.42825) = 7.409244e-163 2000 rounds
| 29/44
44 h-m-p 0.0000 0.0000 89.0078 ++ 1760.657980 m 0.0000 3296 | 29/44
45 h-m-p 0.0004 0.1172 3.2091 +++++ 1758.957877 m 0.1172 3361 | 30/44
46 h-m-p 0.0008 0.0040 8.4040 +Y
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
C 1758.834883 1 0.0035 3425
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42869) = 6.177512e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42849) = 6.178757e-161 2000 rounds
QuantileBeta(0.05, 0.00788, 1.42859) = 6.178135e-161 2000 rounds
| 30/44
47 h-m-p 0.1414 1.4221 0.2077 +YCCC 1758.096277 3 0.3920 3492 | 30/44
48 h-m-p 0.6443 3.2217 0.1237 YCYC 1757.007646 3 1.1015 3557 | 30/44
49 h-m-p 0.9076 5.4269 0.1502 CYC 1756.765545 2 1.0879 3621 | 30/44
50 h-m-p 1.0181 5.0907 0.0265 CYCCC 1756.563843 4 1.5322 3689 | 29/44
51 h-m-p 0.1407 8.0000 0.2888 +YC 1756.538455 1 0.3635 3752 | 29/44
52 h-m-p 1.1326 5.6631 0.0523 CCC 1756.487253 2 1.3777 3818 | 29/44
53 h-m-p 0.9804 8.0000 0.0735 YCCC 1756.460122 3 2.2211 3885 | 29/44
54 h-m-p 1.6000 8.0000 0.0988 CYC 1756.436055 2 1.7385 3950 | 29/44
55 h-m-p 1.1056 6.0274 0.1553 CCCC 1756.419712 3 1.3616 4018 | 29/44
56 h-m-p 1.6000 8.0000 0.1265 YC 1756.406228 1 0.8731 4081 | 29/44
57 h-m-p 0.5133 3.1719 0.2153 CYCC 1756.395444 3 0.7395 4148 | 29/44
58 h-m-p 1.3565 8.0000 0.1173 CCC 1756.385681 2 1.9412 4214 | 29/44
59 h-m-p 1.6000 8.0000 0.0840 CC 1756.380717 1 2.2978 4278 | 29/44
60 h-m-p 1.6000 8.0000 0.0309 YC 1756.378092 1 1.0102 4341 | 29/44
61 h-m-p 0.1588 6.6777 0.1968 +YCCC 1756.369740 3 1.4083 4409 | 29/44
62 h-m-p 1.6000 8.0000 0.1511 CC 1756.360910 1 2.0293 4473 | 29/44
63 h-m-p 1.6000 8.0000 0.1064 +YC 1756.347890 1 4.0902 4537 | 29/44
64 h-m-p 1.6000 8.0000 0.0218 CC 1756.345162 1 0.6054 4601 | 29/44
65 h-m-p 0.0422 5.9878 0.3128 ++CC 1756.341571 1 0.6900 4667 | 29/44
66 h-m-p 1.6000 8.0000 0.0438 CC 1756.340860 1 2.0667 4731 | 29/44
67 h-m-p 1.5339 8.0000 0.0590 YC 1756.340397 1 2.5561 4794 | 29/44
68 h-m-p 1.6000 8.0000 0.0149 YC 1756.340246 1 1.1455 4857 | 29/44
69 h-m-p 0.9775 8.0000 0.0175 Y 1756.340180 0 1.7347 4919 | 29/44
70 h-m-p 1.6000 8.0000 0.0065 ++ 1756.339955 m 8.0000 4981 | 29/44
71 h-m-p 1.5115 8.0000 0.0342 +YC 1756.339404 1 4.8059 5045 | 29/44
72 h-m-p 1.6000 8.0000 0.0580 ++ 1756.335724 m 8.0000 5107 | 29/44
73 h-m-p 0.8689 7.9100 0.5338 CYC 1756.332327 2 1.2056 5172 | 29/44
74 h-m-p 0.9574 8.0000 0.6721 YC 1756.329158 1 0.6846 5235 | 29/44
75 h-m-p 1.1743 8.0000 0.3918 C 1756.325594 0 1.1743 5297 | 29/44
76 h-m-p 1.6000 8.0000 0.1991 CC 1756.323352 1 1.3306 5361 | 29/44
77 h-m-p 0.5238 8.0000 0.5058 +Y 1756.320826 0 2.0953 5424 | 29/44
78 h-m-p 1.6000 8.0000 0.3213 CC 1756.316817 1 2.2197 5488 | 29/44
79 h-m-p 0.8888 8.0000 0.8023 YC 1756.313356 1 1.9736 5551 | 29/44
80 h-m-p 1.6000 8.0000 0.9154 CC 1756.310578 1 2.1715 5615 | 29/44
81 h-m-p 1.6000 8.0000 0.9357 YCC 1756.307083 2 2.9396 5680 | 29/44
82 h-m-p 0.8960 8.0000 3.0700 CC 1756.305058 1 1.0100 5744 | 29/44
83 h-m-p 1.6000 8.0000 1.7783 YC 1756.303968 1 0.8416 5807 | 29/44
84 h-m-p 0.8514 8.0000 1.7578 +CC 1756.302094 1 3.0187 5872 | 29/44
85 h-m-p 1.6000 8.0000 2.0607 YC 1756.300437 1 3.1556 5935 | 29/44
86 h-m-p 1.6000 8.0000 3.2614 YC 1756.299220 1 2.8255 5998 | 29/44
87 h-m-p 1.6000 8.0000 3.5957 C 1756.298345 0 2.0110 6060 | 29/44
88 h-m-p 1.0478 7.8365 6.9013 CC 1756.297786 1 1.3740 6124 | 29/44
89 h-m-p 1.6000 8.0000 3.2534 +YC 1756.297235 1 4.8590 6188 | 29/44
90 h-m-p 0.6452 3.2259 8.9245 +Y 1756.296324 0 2.8217 6251 | 29/44
91 h-m-p 0.0717 0.3584 10.0640 ++ 1756.296198 m 0.3584 6313 | 29/44
92 h-m-p 0.0000 0.0000 22.9860
h-m-p: 0.00000000e+00 0.00000000e+00 2.29860158e+01 1756.296198
.. | 29/44
93 h-m-p 0.0000 0.0012 3.9884 C 1756.296125 0 0.0000 6434 | 29/44
94 h-m-p 0.0001 0.0317 1.1004 Y 1756.296108 0 0.0000 6496 | 29/44
95 h-m-p 0.0001 0.0253 0.9255 C 1756.296087 0 0.0001 6558 | 29/44
96 h-m-p 0.0000 0.0167 1.7176 C 1756.296070 0 0.0000 6620 | 29/44
97 h-m-p 0.0001 0.0131 1.1223 Y 1756.296068 0 0.0000 6682 | 29/44
98 h-m-p 0.0025 1.2572 0.0377 -Y 1756.296068 0 0.0001 6745 | 29/44
99 h-m-p 0.0007 0.3349 0.5301 -Y 1756.296067 0 0.0001 6808 | 29/44
100 h-m-p 0.0021 0.3010 0.0204 ---Y 1756.296067 0 0.0000 6873 | 29/44
101 h-m-p 0.0160 8.0000 0.0085 ++Y 1756.296062 0 0.1713 6937 | 29/44
102 h-m-p 0.0001 0.0276 159.4564 +Y 1756.295969 0 0.0002 7000 | 29/44
103 h-m-p 0.0040 0.0355 6.7104 ----C 1756.295969 0 0.0000 7066 | 29/44
104 h-m-p 0.0160 8.0000 0.0045 --Y 1756.295969 0 0.0003 7130 | 29/44
105 h-m-p 0.0089 4.4363 0.6120 +Y 1756.295906 0 0.0574 7193 | 29/44
106 h-m-p 1.6000 8.0000 0.0133 Y 1756.295851 0 2.6351 7255 | 29/44
107 h-m-p 1.6000 8.0000 0.0055 C 1756.295842 0 1.4373 7317 | 29/44
108 h-m-p 1.6000 8.0000 0.0001 C 1756.295842 0 0.5385 7379 | 29/44
109 h-m-p 0.1545 8.0000 0.0004 Y 1756.295842 0 0.1545 7441 | 29/44
110 h-m-p 0.4290 8.0000 0.0002 ---------------.. | 29/44
111 h-m-p 0.0007 0.3282 0.0365 -----C 1756.295842 0 0.0000 7583 | 29/44
112 h-m-p 0.0160 8.0000 0.0018 -------------.. | 29/44
113 h-m-p 0.0007 0.3347 0.0358 -----------
Out..
lnL = -1756.295842
7728 lfun, 92736 eigenQcodon, 3315312 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -1765.382596 S = -1685.314147 -112.780083
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 107 patterns 52:03
did 20 / 107 patterns 52:03
did 30 / 107 patterns 52:03
did 40 / 107 patterns 52:03
did 50 / 107 patterns 52:04
did 60 / 107 patterns 52:04
did 70 / 107 patterns 52:04
did 80 / 107 patterns 52:04
did 90 / 107 patterns 52:04
did 100 / 107 patterns 52:04
did 107 / 107 patterns 52:05end of tree file.
Time used: 52:05
The loglikelihoods for models M1, M2, M7 and M8 are -1756.408119 -1756.294110 -1756.488869 -1756.295842 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
N09_1627B_nsp15_VIPR_ALG4_ARB07605_1_19714_20835_1_2016_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N14_nsp15_VIPR_ALG4_89515540_19603_20724_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SLENVVYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
HKU1_human_USA_HKU1_5_2009_nsp15_VIPR_ALG4_545299228_19752_20873_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N19_nsp15_VIPR_ALG4_89515414_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
HKU1_human_USA_HKU1_15_2009_nsp15_VIPR_ALG4_545299268_19524_20645_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N09_1663B_nsp15_VIPR_ALG4_ARB07596_1_19282_20403_1_2016_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N25_nsp15_VIPR_ALG4_89515468_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLPTNIAVELFTK
HKU1_human_USA_HKU1_10_2010_nsp15_VIPR_ALG4_545299238_19662_20783_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
BJ01_p9_nsp15_VIPR_ALG4_1002824425_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N6_nsp15_VIPR_ALG4_89515486_19363_20484_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
SI17244_nsp15_VIPR_ALG4_AYN64559_1_19632_20753_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLPTNIAVELFTK
N17_nsp15_VIPR_ALG4_89515567_19606_20727_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N13_nsp15_VIPR_ALG4_89515531_19573_20694_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N10_nsp15_VIPR_ALG4_89515513_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N08_87_nsp15_VIPR_ALG4_ARB07436_1_19706_20827_1_2016_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLPTNIAVELFTK
HKU1_human_USA_HKU1_12_2010_nsp15_VIPR_ALG4_545299278_19812_20933_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
HKU1_human_USA_HKU1_13_2010_nsp15_VIPR_ALG4_545299258_19812_20933_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
SC2521_nsp15_VIPR_ALG4_AZS52616_1_19729_20850_1_2017_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLPTNIAVELFTK
HKU1_human_USA_HKU1_18_2010_nsp15_VIPR_ALG4_530291049_19767_20888_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
UNKNOWN_AY884001_nsp15_VIPR_ALG4_62198465_19636_20757_1_NA_NA_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLPTNIAVELFTK
N18_nsp15_VIPR_ALG4_89515576_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N16_nsp15_VIPR_ALG4_89515558_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N21_nsp15_VIPR_ALG4_89515432_19636_20757_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N23_nsp15_VIPR_ALG4_89515450_19618_20739_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N3_nsp15_VIPR_ALG4_89515477_19726_20847_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
HKU1_human_USA_HKU1_11_2009_nsp15_VIPR_ALG4_545299248_19572_20693_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N20_nsp15_VIPR_ALG4_89515423_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
N7_nsp15_VIPR_ALG4_89515495_19663_20784_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
HKU1_ORF1ab_YP_460022_1_NA_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTK
*****:*****.****** *******:*********************:***********
N09_1627B_nsp15_VIPR_ALG4_ARB07605_1_19714_20835_1_2016_USA_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N14_nsp15_VIPR_ALG4_89515540_19603_20724_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
HKU1_human_USA_HKU1_5_2009_nsp15_VIPR_ALG4_545299228_19752_20873_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N19_nsp15_VIPR_ALG4_89515414_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
HKU1_human_USA_HKU1_15_2009_nsp15_VIPR_ALG4_545299268_19524_20645_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N09_1663B_nsp15_VIPR_ALG4_ARB07596_1_19282_20403_1_2016_USA_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N25_nsp15_VIPR_ALG4_89515468_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLNFIENLNVLFDGR
HKU1_human_USA_HKU1_10_2010_nsp15_VIPR_ALG4_545299238_19662_20783_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
BJ01_p9_nsp15_VIPR_ALG4_1002824425_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N6_nsp15_VIPR_ALG4_89515486_19363_20484_1_NA_China_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
SI17244_nsp15_VIPR_ALG4_AYN64559_1_19632_20753_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLNFIENLNVLFDGR
N17_nsp15_VIPR_ALG4_89515567_19606_20727_1_NA_China_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N13_nsp15_VIPR_ALG4_89515531_19573_20694_1_NA_China_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N10_nsp15_VIPR_ALG4_89515513_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N08_87_nsp15_VIPR_ALG4_ARB07436_1_19706_20827_1_2016_USA_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLNFIENLNVLFDGR
HKU1_human_USA_HKU1_12_2010_nsp15_VIPR_ALG4_545299278_19812_20933_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
HKU1_human_USA_HKU1_13_2010_nsp15_VIPR_ALG4_545299258_19812_20933_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
SC2521_nsp15_VIPR_ALG4_AZS52616_1_19729_20850_1_2017_USA_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLNFIENLNVLFDGR
HKU1_human_USA_HKU1_18_2010_nsp15_VIPR_ALG4_530291049_19767_20888_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
UNKNOWN_AY884001_nsp15_VIPR_ALG4_62198465_19636_20757_1_NA_NA_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLNFIENLNVLFDGR
N18_nsp15_VIPR_ALG4_89515576_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N16_nsp15_VIPR_ALG4_89515558_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N21_nsp15_VIPR_ALG4_89515432_19636_20757_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N23_nsp15_VIPR_ALG4_89515450_19618_20739_1_NA_China_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N3_nsp15_VIPR_ALG4_89515477_19726_20847_1_NA_China_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
HKU1_human_USA_HKU1_11_2009_nsp15_VIPR_ALG4_545299248_19572_20693_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N20_nsp15_VIPR_ALG4_89515423_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
N7_nsp15_VIPR_ALG4_89515495_19663_20784_1_NA_China_Unknown_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
HKU1_ORF1ab_YP_460022_1_NA_USA_Human_Human_coronavirus_HKU1 RSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGR
***********************************************:******:*****
N09_1627B_nsp15_VIPR_ALG4_ARB07605_1_19714_20835_1_2016_USA_Human_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N14_nsp15_VIPR_ALG4_89515540_19603_20724_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
HKU1_human_USA_HKU1_5_2009_nsp15_VIPR_ALG4_545299228_19752_20873_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N19_nsp15_VIPR_ALG4_89515414_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
HKU1_human_USA_HKU1_15_2009_nsp15_VIPR_ALG4_545299268_19524_20645_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N09_1663B_nsp15_VIPR_ALG4_ARB07596_1_19282_20403_1_2016_USA_Human_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N25_nsp15_VIPR_ALG4_89515468_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 DNGALEAFRKARNGVFISTGKLSSLSMIKGPQRADLNGVIVDKVGELNVEFWFAMRKDGD
HKU1_human_USA_HKU1_10_2010_nsp15_VIPR_ALG4_545299238_19662_20783_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
BJ01_p9_nsp15_VIPR_ALG4_1002824425_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N6_nsp15_VIPR_ALG4_89515486_19363_20484_1_NA_China_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
SI17244_nsp15_VIPR_ALG4_AYN64559_1_19632_20753_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 DNGALEAFRKARNGVFISTGKLSSLSMIKGPQRADLNGVIVDKVGELNVEFWFAMRKDGD
N17_nsp15_VIPR_ALG4_89515567_19606_20727_1_NA_China_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N13_nsp15_VIPR_ALG4_89515531_19573_20694_1_NA_China_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N10_nsp15_VIPR_ALG4_89515513_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N08_87_nsp15_VIPR_ALG4_ARB07436_1_19706_20827_1_2016_USA_Human_Human_coronavirus_HKU1 DNGALEAFRKARNGVFISTGKLSSLSMIKGPQRADLNGVIVDKVGELNVEFWFAMRKDGD
HKU1_human_USA_HKU1_12_2010_nsp15_VIPR_ALG4_545299278_19812_20933_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
HKU1_human_USA_HKU1_13_2010_nsp15_VIPR_ALG4_545299258_19812_20933_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
SC2521_nsp15_VIPR_ALG4_AZS52616_1_19729_20850_1_2017_USA_Human_Human_coronavirus_HKU1 DNGALEAFRKARNGVFISTGKLSSLSMIKGPQRADLNGVIVDKVGELNVEFWFAMRKDGD
HKU1_human_USA_HKU1_18_2010_nsp15_VIPR_ALG4_530291049_19767_20888_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
UNKNOWN_AY884001_nsp15_VIPR_ALG4_62198465_19636_20757_1_NA_NA_Unknown_Human_coronavirus_HKU1 DNGALEAFRKARNGVFISTGKLSSLSMIKGPQRADLNGVIVDKVGELNVEFWFAMRKDGD
N18_nsp15_VIPR_ALG4_89515576_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N16_nsp15_VIPR_ALG4_89515558_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N21_nsp15_VIPR_ALG4_89515432_19636_20757_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N23_nsp15_VIPR_ALG4_89515450_19618_20739_1_NA_China_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N3_nsp15_VIPR_ALG4_89515477_19726_20847_1_NA_China_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
HKU1_human_USA_HKU1_11_2009_nsp15_VIPR_ALG4_545299248_19572_20693_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N20_nsp15_VIPR_ALG4_89515423_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
N7_nsp15_VIPR_ALG4_89515495_19663_20784_1_NA_China_Unknown_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
HKU1_ORF1ab_YP_460022_1_NA_USA_Human_Human_coronavirus_HKU1 DTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGD
*.***************** *** ***********************:************
N09_1627B_nsp15_VIPR_ALG4_ARB07605_1_19714_20835_1_2016_USA_Human_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N14_nsp15_VIPR_ALG4_89515540_19603_20724_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
HKU1_human_USA_HKU1_5_2009_nsp15_VIPR_ALG4_545299228_19752_20873_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N19_nsp15_VIPR_ALG4_89515414_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
HKU1_human_USA_HKU1_15_2009_nsp15_VIPR_ALG4_545299268_19524_20645_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N09_1663B_nsp15_VIPR_ALG4_ARB07596_1_19282_20403_1_2016_USA_Human_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N25_nsp15_VIPR_ALG4_89515468_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 DVIFSRADSLSPSHYWSPQGNLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERD
HKU1_human_USA_HKU1_10_2010_nsp15_VIPR_ALG4_545299238_19662_20783_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
BJ01_p9_nsp15_VIPR_ALG4_1002824425_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N6_nsp15_VIPR_ALG4_89515486_19363_20484_1_NA_China_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
SI17244_nsp15_VIPR_ALG4_AYN64559_1_19632_20753_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 DVIFSRADSLSPSHYWSPQGNLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERD
N17_nsp15_VIPR_ALG4_89515567_19606_20727_1_NA_China_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N13_nsp15_VIPR_ALG4_89515531_19573_20694_1_NA_China_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N10_nsp15_VIPR_ALG4_89515513_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N08_87_nsp15_VIPR_ALG4_ARB07436_1_19706_20827_1_2016_USA_Human_Human_coronavirus_HKU1 DVIFSRADSLSPSHYWSPQGNLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERD
HKU1_human_USA_HKU1_12_2010_nsp15_VIPR_ALG4_545299278_19812_20933_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
HKU1_human_USA_HKU1_13_2010_nsp15_VIPR_ALG4_545299258_19812_20933_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
SC2521_nsp15_VIPR_ALG4_AZS52616_1_19729_20850_1_2017_USA_Human_Human_coronavirus_HKU1 DVIFSRADSLSPSHYWSPQGNLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERD
HKU1_human_USA_HKU1_18_2010_nsp15_VIPR_ALG4_530291049_19767_20888_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
UNKNOWN_AY884001_nsp15_VIPR_ALG4_62198465_19636_20757_1_NA_NA_Unknown_Human_coronavirus_HKU1 DVIFSRADSLSPSHYWSPQGNLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERD
N18_nsp15_VIPR_ALG4_89515576_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N16_nsp15_VIPR_ALG4_89515558_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N21_nsp15_VIPR_ALG4_89515432_19636_20757_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N23_nsp15_VIPR_ALG4_89515450_19618_20739_1_NA_China_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N3_nsp15_VIPR_ALG4_89515477_19726_20847_1_NA_China_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
HKU1_human_USA_HKU1_11_2009_nsp15_VIPR_ALG4_545299248_19572_20693_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N20_nsp15_VIPR_ALG4_89515423_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
N7_nsp15_VIPR_ALG4_89515495_19663_20784_1_NA_China_Unknown_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
HKU1_ORF1ab_YP_460022_1_NA_USA_Human_Human_coronavirus_HKU1 DVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERD
******:***..*****************. *****:************:**********
N09_1627B_nsp15_VIPR_ALG4_ARB07605_1_19714_20835_1_2016_USA_Human_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N14_nsp15_VIPR_ALG4_89515540_19603_20724_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
HKU1_human_USA_HKU1_5_2009_nsp15_VIPR_ALG4_545299228_19752_20873_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N19_nsp15_VIPR_ALG4_89515414_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
HKU1_human_USA_HKU1_15_2009_nsp15_VIPR_ALG4_545299268_19524_20645_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N09_1663B_nsp15_VIPR_ALG4_ARB07596_1_19282_20403_1_2016_USA_Human_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N25_nsp15_VIPR_ALG4_89515468_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 FIDMEDSLFIAKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
HKU1_human_USA_HKU1_10_2010_nsp15_VIPR_ALG4_545299238_19662_20783_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
BJ01_p9_nsp15_VIPR_ALG4_1002824425_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N6_nsp15_VIPR_ALG4_89515486_19363_20484_1_NA_China_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
SI17244_nsp15_VIPR_ALG4_AYN64559_1_19632_20753_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 FIDMEDSLFIAKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
N17_nsp15_VIPR_ALG4_89515567_19606_20727_1_NA_China_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N13_nsp15_VIPR_ALG4_89515531_19573_20694_1_NA_China_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N10_nsp15_VIPR_ALG4_89515513_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N08_87_nsp15_VIPR_ALG4_ARB07436_1_19706_20827_1_2016_USA_Human_Human_coronavirus_HKU1 FIDMEDSLFIAKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
HKU1_human_USA_HKU1_12_2010_nsp15_VIPR_ALG4_545299278_19812_20933_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
HKU1_human_USA_HKU1_13_2010_nsp15_VIPR_ALG4_545299258_19812_20933_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
SC2521_nsp15_VIPR_ALG4_AZS52616_1_19729_20850_1_2017_USA_Human_Human_coronavirus_HKU1 FIDMEDSLFIAKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
HKU1_human_USA_HKU1_18_2010_nsp15_VIPR_ALG4_530291049_19767_20888_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
UNKNOWN_AY884001_nsp15_VIPR_ALG4_62198465_19636_20757_1_NA_NA_Unknown_Human_coronavirus_HKU1 FIDMEDSLFIAKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYD
N18_nsp15_VIPR_ALG4_89515576_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N16_nsp15_VIPR_ALG4_89515558_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N21_nsp15_VIPR_ALG4_89515432_19636_20757_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N23_nsp15_VIPR_ALG4_89515450_19618_20739_1_NA_China_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N3_nsp15_VIPR_ALG4_89515477_19726_20847_1_NA_China_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRKKKSNLLIQEFLQYD
HKU1_human_USA_HKU1_11_2009_nsp15_VIPR_ALG4_545299248_19572_20693_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N20_nsp15_VIPR_ALG4_89515423_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
N7_nsp15_VIPR_ALG4_89515495_19663_20784_1_NA_China_Unknown_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYD
HKU1_ORF1ab_YP_460022_1_NA_USA_Human_Human_coronavirus_HKU1 FIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRKKKSNLLIQEFLQYD
****:*.**********************:*************** *****:********
N09_1627B_nsp15_VIPR_ALG4_ARB07605_1_19714_20835_1_2016_USA_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N14_nsp15_VIPR_ALG4_89515540_19603_20724_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
HKU1_human_USA_HKU1_5_2009_nsp15_VIPR_ALG4_545299228_19752_20873_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N19_nsp15_VIPR_ALG4_89515414_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
HKU1_human_USA_HKU1_15_2009_nsp15_VIPR_ALG4_545299268_19524_20645_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N09_1663B_nsp15_VIPR_ALG4_ARB07596_1_19282_20403_1_2016_USA_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N25_nsp15_VIPR_ALG4_89515468_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINVDFKDFQFMLW
HKU1_human_USA_HKU1_10_2010_nsp15_VIPR_ALG4_545299238_19662_20783_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
BJ01_p9_nsp15_VIPR_ALG4_1002824425_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N6_nsp15_VIPR_ALG4_89515486_19363_20484_1_NA_China_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
SI17244_nsp15_VIPR_ALG4_AYN64559_1_19632_20753_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINVDFKDFQFMLW
N17_nsp15_VIPR_ALG4_89515567_19606_20727_1_NA_China_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N13_nsp15_VIPR_ALG4_89515531_19573_20694_1_NA_China_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N10_nsp15_VIPR_ALG4_89515513_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N08_87_nsp15_VIPR_ALG4_ARB07436_1_19706_20827_1_2016_USA_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINVDFKDFQFMLW
HKU1_human_USA_HKU1_12_2010_nsp15_VIPR_ALG4_545299278_19812_20933_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
HKU1_human_USA_HKU1_13_2010_nsp15_VIPR_ALG4_545299258_19812_20933_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
SC2521_nsp15_VIPR_ALG4_AZS52616_1_19729_20850_1_2017_USA_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLSCVSKVVNINVDFKDFQFMLW
HKU1_human_USA_HKU1_18_2010_nsp15_VIPR_ALG4_530291049_19767_20888_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
UNKNOWN_AY884001_nsp15_VIPR_ALG4_62198465_19636_20757_1_NA_NA_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINVDFKDFQFMLW
N18_nsp15_VIPR_ALG4_89515576_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N16_nsp15_VIPR_ALG4_89515558_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N21_nsp15_VIPR_ALG4_89515432_19636_20757_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N23_nsp15_VIPR_ALG4_89515450_19618_20739_1_NA_China_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N3_nsp15_VIPR_ALG4_89515477_19726_20847_1_NA_China_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
HKU1_human_USA_HKU1_11_2009_nsp15_VIPR_ALG4_545299248_19572_20693_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N20_nsp15_VIPR_ALG4_89515423_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
N7_nsp15_VIPR_ALG4_89515495_19663_20784_1_NA_China_Unknown_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
HKU1_ORF1ab_YP_460022_1_NA_USA_Human_Human_coronavirus_HKU1 SSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLW
******************************* *******.********************
N09_1627B_nsp15_VIPR_ALG4_ARB07605_1_19714_20835_1_2016_USA_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N14_nsp15_VIPR_ALG4_89515540_19603_20724_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
HKU1_human_USA_HKU1_5_2009_nsp15_VIPR_ALG4_545299228_19752_20873_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N19_nsp15_VIPR_ALG4_89515414_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
HKU1_human_USA_HKU1_15_2009_nsp15_VIPR_ALG4_545299268_19524_20645_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N09_1663B_nsp15_VIPR_ALG4_ARB07596_1_19282_20403_1_2016_USA_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N25_nsp15_VIPR_ALG4_89515468_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
HKU1_human_USA_HKU1_10_2010_nsp15_VIPR_ALG4_545299238_19662_20783_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
BJ01_p9_nsp15_VIPR_ALG4_1002824425_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N6_nsp15_VIPR_ALG4_89515486_19363_20484_1_NA_China_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
SI17244_nsp15_VIPR_ALG4_AYN64559_1_19632_20753_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N17_nsp15_VIPR_ALG4_89515567_19606_20727_1_NA_China_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N13_nsp15_VIPR_ALG4_89515531_19573_20694_1_NA_China_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N10_nsp15_VIPR_ALG4_89515513_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N08_87_nsp15_VIPR_ALG4_ARB07436_1_19706_20827_1_2016_USA_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
HKU1_human_USA_HKU1_12_2010_nsp15_VIPR_ALG4_545299278_19812_20933_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
HKU1_human_USA_HKU1_13_2010_nsp15_VIPR_ALG4_545299258_19812_20933_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
SC2521_nsp15_VIPR_ALG4_AZS52616_1_19729_20850_1_2017_USA_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
HKU1_human_USA_HKU1_18_2010_nsp15_VIPR_ALG4_530291049_19767_20888_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
UNKNOWN_AY884001_nsp15_VIPR_ALG4_62198465_19636_20757_1_NA_NA_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N18_nsp15_VIPR_ALG4_89515576_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N16_nsp15_VIPR_ALG4_89515558_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 CNDHKIMTFYPKMQ
N21_nsp15_VIPR_ALG4_89515432_19636_20757_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N23_nsp15_VIPR_ALG4_89515450_19618_20739_1_NA_China_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N3_nsp15_VIPR_ALG4_89515477_19726_20847_1_NA_China_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
HKU1_human_USA_HKU1_11_2009_nsp15_VIPR_ALG4_545299248_19572_20693_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
N20_nsp15_VIPR_ALG4_89515423_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 CNDHKIMTFYPKMQ
N7_nsp15_VIPR_ALG4_89515495_19663_20784_1_NA_China_Unknown_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
HKU1_ORF1ab_YP_460022_1_NA_USA_Human_Human_coronavirus_HKU1 CNDNKIMTFYPKMQ
***:**********
>N09_1627B_nsp15_VIPR_ALG4_ARB07605_1_19714_20835_1_2016_USA_Human_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N14_nsp15_VIPR_ALG4_89515540_19603_20724_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAGTATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >HKU1_human_USA_HKU1_5_2009_nsp15_VIPR_ALG4_545299228_19752_20873_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N19_nsp15_VIPR_ALG4_89515414_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >HKU1_human_USA_HKU1_15_2009_nsp15_VIPR_ALG4_545299268_19524_20645_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N09_1663B_nsp15_VIPR_ALG4_ARB07596_1_19282_20403_1_2016_USA_Human_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N25_nsp15_VIPR_ALG4_89515468_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 AGCTTAGAAAATGTAATATATAATTTGGTTAATGCTGGTCATTATGATGGACGTATAGGTGAATTGCCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCACTTCCTACTAATATAGCTGTTGAATTATTTACAAAACGTAGTATTCGCCATCACCCTGAACTTAAGATTCTTAGAAATTTGAATATTGATATCTGTTGGAAGCATGTCCTTTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCTACCTATGGTGTCTGCAAATACACAGATTTAAATTTTATTGAAAATTTGAATGTACTTTTTGATGGTCGTGACAATGGTGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGGAAAATTAAGTAGTTTGTCTATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGCGTAATTGTGGATAAAGTTGGAGAACTCAATGTTGAGTTTTGGTTTGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGTGCAGACAGCCTAAGCCCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGTGCAGGTAATGCCAGCGGTAATGATGCTCTAGCGCGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAACCTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGAGGATAGTCTGTTTATAGCCAAATATGGTTTAGAAGATTATGCATTTGATCATATAGTTTATGGTAGTTTTAATTATAAAGTTATAGGAGGTTTGCACTTGCTTATAGGTTTATTTCGTAGACTAAAAAAATCTAATTTGGTAATTCAAGAGTTTTTGCAGTATGATTCTAGTATTCATTCATATTTCATTACTGATCAAGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGACTTTGTTGTTATTGTTAAGTCATTAAATTTGAATTGTGTTAGTAAAGTTGTTAATATTAATGTTGACTTTAAGGACTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >HKU1_human_USA_HKU1_10_2010_nsp15_VIPR_ALG4_545299238_19662_20783_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >BJ01_p9_nsp15_VIPR_ALG4_1002824425_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATTCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N6_nsp15_VIPR_ALG4_89515486_19363_20484_1_NA_China_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCTACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >SI17244_nsp15_VIPR_ALG4_AYN64559_1_19632_20753_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 AGCTTAGAAAATGTAATATATAATTTGGTTAATGCTGGTCATTATGATGGACGTATAGGTGAATTGCCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCACTTCCTACTAATATAGCTGTTGAATTATTTACAAAACGTAGTATTCGCCATCACCCTGAACTTAAGATTCTTAGAAATTTGAATATTGATATTTGTTGGAAGCATGTCCTTTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCTACCTATGGTGTCTGCAAATACACAGATTTAAATTTTATTGAAAATTTGAATGTACTTTTTGATGGTCGTGACAATGGTGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGGAAAATTAAGTAGTTTGTCTATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGCGTAATTGTGGATAAAGTTGGAGAACTCAATGTTGAGTTTTGGTTTGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGTGCAGACAGCCTAAGCCCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGTGCAGGTAATGCCAGCGGTAATGATGCTCTAGCGCGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAACCTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGAGGATAGTCTGTTTATAGCCAAATATGGTTTAGAAGATTATGCATTTGATCATATAGTTTATGGTAGTTTTAATTATAAAGTTATAGGAGGTTTGCACTTGCTTATAGGTTTATTTCGTAGACTAAAAAAATCTAATTTGGTAATTCAAGAGTTTTTGCAGTATGATTCTAGTATTCATTCATATTTCATTACTGATCAAGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGACTTTGTTGTTATTGTTAAGTCATTAAATTTGAATTGTGTTAGTAAAGTTGTTAATATTAATGTTGACTTTAAGGACTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N17_nsp15_VIPR_ALG4_89515567_19606_20727_1_NA_China_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATTCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACTGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N13_nsp15_VIPR_ALG4_89515531_19573_20694_1_NA_China_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N10_nsp15_VIPR_ALG4_89515513_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N08_87_nsp15_VIPR_ALG4_ARB07436_1_19706_20827_1_2016_USA_Human_Human_coronavirus_HKU1 AGCTTAGAAAATGTAATATATAATTTGGTTAATGCTGGTCATTATGATGGACGTATAGGTGAATTGCCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCACTTCCTACTAATATAGCTGTTGAATTATTTACAAAACGTAGTATTCGCCATCACCCTGAACTTAAGATTCTTAGAAATTTGAATATTGATATTTGTTGGAAGCATGTCCTTTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCTACCTATGGTGTCTGCAAATACACAGATTTAAATTTTATTGAAAATTTGAATGTACTTTTTGATGGTCGTGACAATGGTGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGGAAAATTAAGTAGTTTGTCTATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGCGTAATTGTGGATAAAGTTGGAGAACTCAATGTTGAGTTTTGGTTTGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGTGCAGACAGCCTAAGCCCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGTGCAGGTAATGCCAGCGGTAATGATGCTCTAGCGCGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAACCTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGAGGATAGTCTGTTTATAGCCAAATATGGTTTAGAAGATTATGCATTTGATCATATAGTTTATGGTAGTTTTAATTATAAAGTTATAGGAGGTTTGCACTTGCTTATAGGTTTATTTCGTAGACTAAAAAAATCTAATTTGGTAATTCAAGAGTTTTTGCAGTATGATTCTAGTATTCATTCATATTTCATTACTGATCAAGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGACTTTGTTGTTATTGTTAAGTCATTAAATTTGAATTGTGTTAGTAAAGTTGTTAATATTAATGTTGACTTTAAGGACTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >HKU1_human_USA_HKU1_12_2010_nsp15_VIPR_ALG4_545299278_19812_20933_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATTAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >HKU1_human_USA_HKU1_13_2010_nsp15_VIPR_ALG4_545299258_19812_20933_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATTAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >SC2521_nsp15_VIPR_ALG4_AZS52616_1_19729_20850_1_2017_USA_Human_Human_coronavirus_HKU1 AGCTTAGAAAATGTAATATATAATTTGGTTAATGCTGGTCATTATGATGGACGTATAGGTGAATTGCCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCACTTCCTACTAATATAGCTGTTGAATTATTTACAAAACGTAGTATTCGCCATCACCCTGAACTTAAGATTCTTAGAAATTTGAATATTGATATCTGTTGGAAGCATGTCCTTTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCTACCTATGGTGTCTGCAAATACACAGATTTAAATTTTATTGAAAATTTGAATGTACTTTTTGATGGTCGTGACAATGGTGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGGAAAATTAAGTAGTTTGTCTATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGCGTAATTGTGGATAAAGTTGGAGAACTCAATGTTGAGTTTTGGTTTGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGTGCAGACAGCCTAAGCCCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGTGCAGGTAATGCCAGCGGTAATGATGCTCTAGCGCGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAACCTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGAGGATAGTCTGTTTATAGCCAAATATGGTTTAGAAGATTATGCATTTGATCATATAGTTTATGGTAGTTTTAATTATAAAGTTATAGGAGGTTTGCACTTGCTTATAGGTTTATTTCGTAGACTAAAAAAATCTAATTTGGTAATTCAAGAGTTTTTGCAGTATGATTCTAGTATTCATTCATATTTCATTACTGATCAAGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGACTTTGTTGTTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >HKU1_human_USA_HKU1_18_2010_nsp15_VIPR_ALG4_530291049_19767_20888_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >UNKNOWN_AY884001_nsp15_VIPR_ALG4_62198465_19636_20757_1_NA_NA_Unknown_Human_coronavirus_HKU1 AGCTTAGAAAATGTAATATATAATTTGGTTAATGCTGGTCATTATGATGGACGTATAGGTGAATTGCCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCACTTCCTACTAATATAGCTGTTGAATTATTTACAAAACGTAGTATTCGCCATCACCCTGAACTTAAGATTCTTAGAAATTTGAATATTGATATTTGTTGGAAGCATGTCCTTTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCTACCTATGGTGTCTGCAAATACACAGATTTAAATTTTATTGAAAATTTGAATGTACTTTTTGATGGTCGTGACAATGGTGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGGAAAATTAAGTAGTTTGTCTATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGCGTAATTGTGGATAAAGTTGGAGAACTCAATGTTGAGTTTTGGTTTGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGTGCAGACAGCCTAAGCCCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGTGCAGGTAATGCCAGCGGTAATGATGCTCTAGCGCGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAACCTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGAGGATAGTCTGTTTATAGCCAAATATGGTTTAGAAGATTATGCATTTGATCATATAGTTTATGGTAGTTTTAATTATAAAGTTATAGGAGGTTTGCACTTGCTTATAGGTTTATTTCGTAGACTAAAAAAATCTAATTTGGTAATTCAAGAGTTTTTGCAGTATGATTCTAGTATTCATTCATATTTCATTACTGATCAAGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGACTTTGTTGTTATTGTTAAGTCATTAAATTTGAATTGTGTTAGTAAAGTTGTTAATATTAATGTTGACTTTAAGGACTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N18_nsp15_VIPR_ALG4_89515576_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N16_nsp15_VIPR_ALG4_89515558_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATTCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACTGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATCATAAAATTATGACTTTTTATCCTAAAATGCAA >N21_nsp15_VIPR_ALG4_89515432_19636_20757_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATTCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACTGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATTCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N23_nsp15_VIPR_ALG4_89515450_19618_20739_1_NA_China_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N3_nsp15_VIPR_ALG4_89515477_19726_20847_1_NA_China_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGAAAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >HKU1_human_USA_HKU1_11_2009_nsp15_VIPR_ALG4_545299248_19572_20693_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATTAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >N20_nsp15_VIPR_ALG4_89515423_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATTCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACTGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATCATAAAATTATGACTTTTTATCCTAAAATGCAA >N7_nsp15_VIPR_ALG4_89515495_19663_20784_1_NA_China_Unknown_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCTACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGCTAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA >HKU1_ORF1ab_YP_460022_1_NA_USA_Human_Human_coronavirus_HKU1 AGTTTAGAAAACGTAATATATAACTTGGTTAATGTTGGTCATTATGATGGACGTACAGGTGAATTACCTTGTGCTATTATGAATGACAAAGTTGTTGTTAAGATTAATAATGTAGATACTGTTATTTTTAAAAATAATACATCATTTCCTACTAATATAGCTGTTGAATTGTTTACAAAACGTAGTATCCGGCACCACCCTGAACTTAAGATTCTTAGAAATTTGAACATTGATATTTGTTGGAAGCATGTCCTGTGGGATTATGTTAAAGATAGTTTGTTTTGTAGTTCCACTTATGGTGTTTGTAAATACACAGATTTGAAGTTCATCGAAAATTTGAATATACTTTTTGATGGTCGTGACACTGGCGCTTTAGAAGCTTTTAGAAAAGCAAGAAATGGTGTTTTTATTAGTACTGAAAAATTAAGTAGGTTATCAATGATTAAAGGTCCGCAACGAGCTGATTTAAATGGTGTGATTGTGGATAAAGTTGGAGAACTCAAAGTTGAGTTTTGGTTCGCTATGAGAAAAGATGGTGACGATGTTATCTTCAGCCGAACAGACAGCCTATGCTCAAGCCATTACTGGAGCCCACAAGGTAATCTAGGTGGTAATTGCGCGGGTAATGTCATTGGTAATGATGCTCTAACACGTTTTACTATCTTTACTCAGAGTCGTGTATTGTCAAGTTTTGAACCTCGCTCAGATTTAGAACGGGATTTTATTGATATGGATGATAATCTGTTTATTGCTAAATATGGTTTAGAAGACTATGCATTTGATCATATAGTTTATGGTAGTTTTAACCATAAAGTTATAGGAGGTTTGCATTTGCTTATAGGCTTATTTCGTAGGAAAAAAAAATCTAATTTGTTAATTCAAGAGTTTTTACAGTATGATTCTAGTATTCATTCATATTTTATTACTGATCAGGAGTGTGGTAGTAGTAAGAGTGTTTGTACAGTTATTGATTTATTATTAGATGATTTTGTTTCTATTGTTAAGTCATTAAATTTGAGTTGTGTTAGTAAAGTTGTTAATATTAATGTTGATTTTAAGGATTTTCAATTTATGTTGTGGTGTAATGATAATAAAATTATGACTTTTTATCCTAAAATGCAA
>N09_1627B_nsp15_VIPR_ALG4_ARB07605_1_19714_20835_1_2016_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N14_nsp15_VIPR_ALG4_89515540_19603_20724_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SLENVVYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >HKU1_human_USA_HKU1_5_2009_nsp15_VIPR_ALG4_545299228_19752_20873_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N19_nsp15_VIPR_ALG4_89515414_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >HKU1_human_USA_HKU1_15_2009_nsp15_VIPR_ALG4_545299268_19524_20645_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N09_1663B_nsp15_VIPR_ALG4_ARB07596_1_19282_20403_1_2016_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N25_nsp15_VIPR_ALG4_89515468_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKGPQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQGNLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFIAKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >HKU1_human_USA_HKU1_10_2010_nsp15_VIPR_ALG4_545299238_19662_20783_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >BJ01_p9_nsp15_VIPR_ALG4_1002824425_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N6_nsp15_VIPR_ALG4_89515486_19363_20484_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >SI17244_nsp15_VIPR_ALG4_AYN64559_1_19632_20753_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKGPQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQGNLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFIAKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N17_nsp15_VIPR_ALG4_89515567_19606_20727_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N13_nsp15_VIPR_ALG4_89515531_19573_20694_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N10_nsp15_VIPR_ALG4_89515513_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N08_87_nsp15_VIPR_ALG4_ARB07436_1_19706_20827_1_2016_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKGPQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQGNLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFIAKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >HKU1_human_USA_HKU1_12_2010_nsp15_VIPR_ALG4_545299278_19812_20933_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >HKU1_human_USA_HKU1_13_2010_nsp15_VIPR_ALG4_545299258_19812_20933_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >SC2521_nsp15_VIPR_ALG4_AZS52616_1_19729_20850_1_2017_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKGPQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQGNLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFIAKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >HKU1_human_USA_HKU1_18_2010_nsp15_VIPR_ALG4_530291049_19767_20888_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >UNKNOWN_AY884001_nsp15_VIPR_ALG4_62198465_19636_20757_1_NA_NA_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNAGHYDGRIGELPCAIMNDKVVVKINNVDTVIFKNNTSLPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLNFIENLNVLFDGRDNGALEAFRKARNGVFISTGKLSSLSMIKGPQRADLNGVIVDKVGELNVEFWFAMRKDGDDVIFSRADSLSPSHYWSPQGNLGGNCAGNASGNDALARFTIFTQSRVLSTFEPRSDLERDFIDMEDSLFIAKYGLEDYAFDHIVYGSFNYKVIGGLHLLIGLFRRLKKSNLVIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVVIVKSLNLNCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N18_nsp15_VIPR_ALG4_89515576_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N16_nsp15_VIPR_ALG4_89515558_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDHKIMTFYPKMQ >N21_nsp15_VIPR_ALG4_89515432_19636_20757_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N23_nsp15_VIPR_ALG4_89515450_19618_20739_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N3_nsp15_VIPR_ALG4_89515477_19726_20847_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRKKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >HKU1_human_USA_HKU1_11_2009_nsp15_VIPR_ALG4_545299248_19572_20693_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIINDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >N20_nsp15_VIPR_ALG4_89515423_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDHKIMTFYPKMQ >N7_nsp15_VIPR_ALG4_89515495_19663_20784_1_NA_China_Unknown_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRLKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ >HKU1_ORF1ab_YP_460022_1_NA_USA_Human_Human_coronavirus_HKU1 SLENVIYNLVNVGHYDGRTGELPCAIMNDKVVVKINNVDTVIFKNNTSFPTNIAVELFTKRSIRHHPELKILRNLNIDICWKHVLWDYVKDSLFCSSTYGVCKYTDLKFIENLNILFDGRDTGALEAFRKARNGVFISTEKLSRLSMIKGPQRADLNGVIVDKVGELKVEFWFAMRKDGDDVIFSRTDSLCSSHYWSPQGNLGGNCAGNVIGNDALTRFTIFTQSRVLSSFEPRSDLERDFIDMDDNLFIAKYGLEDYAFDHIVYGSFNHKVIGGLHLLIGLFRRKKKSNLLIQEFLQYDSSIHSYFITDQECGSSKSVCTVIDLLLDDFVSIVKSLNLSCVSKVVNINVDFKDFQFMLWCNDNKIMTFYPKMQ
Reading sequence file /data//pss_subsets/BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result/original_alignment/codeml/fasta/BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result.1
Found 30 sequences of length 1122
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 1.8%
Found 71 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 5
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 48 polymorphic sites
**p-Value(s)**
----------
NSS: 8.00e-03 (1000 permutations)
Max Chi^2: 2.69e-01 (1000 permutations)
PHI (Permutation): 5.42e-01 (1000 permutations)
PHI (Normal): 2.11e-01
#NEXUS
[ID: 1826296599]
begin taxa;
dimensions ntax=30;
taxlabels
BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_18_2010_nsp15_VIPR_ALG4_530291049_19767_20888_1_2010_01_22_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_5_2009_nsp15_VIPR_ALG4_545299228_19752_20873_1_2009_11_28_USA_Human_Human_coronavirus_HKU1
N08_87_nsp15_VIPR_ALG4_ARB07436_1_19706_20827_1_2016_USA_Human_Human_coronavirus_HKU1
N09_1627B_nsp15_VIPR_ALG4_ARB07605_1_19714_20835_1_2016_USA_Human_Human_coronavirus_HKU1
N09_1663B_nsp15_VIPR_ALG4_ARB07596_1_19282_20403_1_2016_USA_Human_Human_coronavirus_HKU1
N10_nsp15_VIPR_ALG4_89515513_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1
N13_nsp15_VIPR_ALG4_89515531_19573_20694_1_NA_China_Unknown_Human_coronavirus_HKU1
N14_nsp15_VIPR_ALG4_89515540_19603_20724_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1
BJ01_p9_nsp15_VIPR_ALG4_1002824425_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1
N16_nsp15_VIPR_ALG4_89515558_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1
N17_nsp15_VIPR_ALG4_89515567_19606_20727_1_NA_China_Unknown_Human_coronavirus_HKU1
N18_nsp15_VIPR_ALG4_89515576_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1
N19_nsp15_VIPR_ALG4_89515414_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1
N20_nsp15_VIPR_ALG4_89515423_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1
N21_nsp15_VIPR_ALG4_89515432_19636_20757_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1
N23_nsp15_VIPR_ALG4_89515450_19618_20739_1_NA_China_Unknown_Human_coronavirus_HKU1
N25_nsp15_VIPR_ALG4_89515468_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1
N3_nsp15_VIPR_ALG4_89515477_19726_20847_1_NA_China_Unknown_Human_coronavirus_HKU1
N6_nsp15_VIPR_ALG4_89515486_19363_20484_1_NA_China_Unknown_Human_coronavirus_HKU1
N7_nsp15_VIPR_ALG4_89515495_19663_20784_1_NA_China_Unknown_Human_coronavirus_HKU1
SC2521_nsp15_VIPR_ALG4_AZS52616_1_19729_20850_1_2017_USA_Human_Human_coronavirus_HKU1
UNKNOWN_AY884001_nsp15_VIPR_ALG4_62198465_19636_20757_1_NA_NA_Unknown_Human_coronavirus_HKU1
SI17244_nsp15_VIPR_ALG4_AYN64559_1_19632_20753_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1
HKU1_ORF1ab_YP_460022_1_NA_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_10_2010_nsp15_VIPR_ALG4_545299238_19662_20783_1_2010_01_16_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_11_2009_nsp15_VIPR_ALG4_545299248_19572_20693_1_2009_12_13_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_12_2010_nsp15_VIPR_ALG4_545299278_19812_20933_1_2010_01_09_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_13_2010_nsp15_VIPR_ALG4_545299258_19812_20933_1_2010_01_08_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_15_2009_nsp15_VIPR_ALG4_545299268_19524_20645_1_2009_12_28_USA_Human_Human_coronavirus_HKU1
;
end;
begin trees;
translate
1 BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1,
2 HKU1_human_USA_HKU1_18_2010_nsp15_VIPR_ALG4_530291049_19767_20888_1_2010_01_22_USA_Human_Human_coronavirus_HKU1,
3 HKU1_human_USA_HKU1_5_2009_nsp15_VIPR_ALG4_545299228_19752_20873_1_2009_11_28_USA_Human_Human_coronavirus_HKU1,
4 N08_87_nsp15_VIPR_ALG4_ARB07436_1_19706_20827_1_2016_USA_Human_Human_coronavirus_HKU1,
5 N09_1627B_nsp15_VIPR_ALG4_ARB07605_1_19714_20835_1_2016_USA_Human_Human_coronavirus_HKU1,
6 N09_1663B_nsp15_VIPR_ALG4_ARB07596_1_19282_20403_1_2016_USA_Human_Human_coronavirus_HKU1,
7 N10_nsp15_VIPR_ALG4_89515513_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1,
8 N13_nsp15_VIPR_ALG4_89515531_19573_20694_1_NA_China_Unknown_Human_coronavirus_HKU1,
9 N14_nsp15_VIPR_ALG4_89515540_19603_20724_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1,
10 BJ01_p9_nsp15_VIPR_ALG4_1002824425_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1,
11 N16_nsp15_VIPR_ALG4_89515558_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1,
12 N17_nsp15_VIPR_ALG4_89515567_19606_20727_1_NA_China_Unknown_Human_coronavirus_HKU1,
13 N18_nsp15_VIPR_ALG4_89515576_19693_20814_1_NA_China_Unknown_Human_coronavirus_HKU1,
14 N19_nsp15_VIPR_ALG4_89515414_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1,
15 N20_nsp15_VIPR_ALG4_89515423_19666_20787_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1,
16 N21_nsp15_VIPR_ALG4_89515432_19636_20757_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1,
17 N23_nsp15_VIPR_ALG4_89515450_19618_20739_1_NA_China_Unknown_Human_coronavirus_HKU1,
18 N25_nsp15_VIPR_ALG4_89515468_19666_20787_1_NA_China_Unknown_Human_coronavirus_HKU1,
19 N3_nsp15_VIPR_ALG4_89515477_19726_20847_1_NA_China_Unknown_Human_coronavirus_HKU1,
20 N6_nsp15_VIPR_ALG4_89515486_19363_20484_1_NA_China_Unknown_Human_coronavirus_HKU1,
21 N7_nsp15_VIPR_ALG4_89515495_19663_20784_1_NA_China_Unknown_Human_coronavirus_HKU1,
22 SC2521_nsp15_VIPR_ALG4_AZS52616_1_19729_20850_1_2017_USA_Human_Human_coronavirus_HKU1,
23 UNKNOWN_AY884001_nsp15_VIPR_ALG4_62198465_19636_20757_1_NA_NA_Unknown_Human_coronavirus_HKU1,
24 SI17244_nsp15_VIPR_ALG4_AYN64559_1_19632_20753_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1,
25 HKU1_ORF1ab_YP_460022_1_NA_USA_Human_Human_coronavirus_HKU1,
26 HKU1_human_USA_HKU1_10_2010_nsp15_VIPR_ALG4_545299238_19662_20783_1_2010_01_16_USA_Human_Human_coronavirus_HKU1,
27 HKU1_human_USA_HKU1_11_2009_nsp15_VIPR_ALG4_545299248_19572_20693_1_2009_12_13_USA_Human_Human_coronavirus_HKU1,
28 HKU1_human_USA_HKU1_12_2010_nsp15_VIPR_ALG4_545299278_19812_20933_1_2010_01_09_USA_Human_Human_coronavirus_HKU1,
29 HKU1_human_USA_HKU1_13_2010_nsp15_VIPR_ALG4_545299258_19812_20933_1_2010_01_08_USA_Human_Human_coronavirus_HKU1,
30 HKU1_human_USA_HKU1_15_2009_nsp15_VIPR_ALG4_545299268_19524_20645_1_2009_12_28_USA_Human_Human_coronavirus_HKU1
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:4.136206e-04,10:3.986800e-04,((11:3.943470e-04,15:3.922757e-04)0.997:9.636295e-04,12:3.977921e-04,16:4.001291e-04)0.994:9.777216e-04,(2:3.966630e-04,3:4.011490e-04,(((4:4.059994e-04,23:3.792559e-04,24:4.026857e-04)0.927:9.252702e-04,18:4.032649e-04)0.953:1.967432e-03,22:5.019546e-04)1.000:3.825497e-02,5:3.852566e-04,6:3.990537e-04,7:3.830149e-04,8:3.898754e-04,9:9.639886e-04,13:4.072269e-04,14:3.997151e-04,17:4.024176e-04,(19:3.974761e-04,25:4.088896e-04)1.000:1.501551e-03,(20:4.454029e-04,21:4.389563e-04)0.777:8.941597e-04,26:3.979895e-04,(27:3.959966e-04,28:4.108422e-04,29:3.895560e-04)0.986:9.359268e-04,30:3.851605e-04)0.619:9.039905e-04);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:4.136206e-04,10:3.986800e-04,((11:3.943470e-04,15:3.922757e-04):9.636295e-04,12:3.977921e-04,16:4.001291e-04):9.777216e-04,(2:3.966630e-04,3:4.011490e-04,(((4:4.059994e-04,23:3.792559e-04,24:4.026857e-04):9.252702e-04,18:4.032649e-04):1.967432e-03,22:5.019546e-04):3.825497e-02,5:3.852566e-04,6:3.990537e-04,7:3.830149e-04,8:3.898754e-04,9:9.639886e-04,13:4.072269e-04,14:3.997151e-04,17:4.024176e-04,(19:3.974761e-04,25:4.088896e-04):1.501551e-03,(20:4.454029e-04,21:4.389563e-04):8.941597e-04,26:3.979895e-04,(27:3.959966e-04,28:4.108422e-04,29:3.895560e-04):9.359268e-04,30:3.851605e-04):9.039905e-04);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1861.38 -1892.42
2 -1860.30 -1890.60
--------------------------------------
TOTAL -1860.70 -1891.87
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.078192 0.000141 0.056898 0.101899 0.077215 732.97 857.04 1.000
r(A<->C){all} 0.072390 0.001366 0.011023 0.143326 0.066258 461.47 538.30 1.000
r(A<->G){all} 0.176295 0.001829 0.099648 0.261799 0.172317 664.06 730.51 1.000
r(A<->T){all} 0.039584 0.000253 0.013886 0.072311 0.037492 639.21 817.09 1.000
r(C<->G){all} 0.071055 0.001934 0.002946 0.157102 0.062282 426.55 586.46 1.000
r(C<->T){all} 0.571892 0.004041 0.440000 0.686545 0.571609 468.31 529.95 1.000
r(G<->T){all} 0.068786 0.000638 0.024710 0.118966 0.065878 716.91 739.15 1.000
pi(A){all} 0.303315 0.000181 0.276525 0.328321 0.302874 884.54 950.27 1.000
pi(C){all} 0.110607 0.000084 0.093916 0.129083 0.110425 1048.83 1096.80 1.000
pi(G){all} 0.203141 0.000139 0.180112 0.225931 0.202833 876.70 972.42 1.000
pi(T){all} 0.382936 0.000203 0.356176 0.411129 0.382978 925.90 970.63 1.000
alpha{1,2} 0.416330 0.404146 0.000109 1.668365 0.188343 953.57 991.32 1.000
alpha{3} 2.106430 1.611899 0.238352 4.579625 1.812278 1118.96 1265.50 1.000
pinvar{all} 0.230729 0.023074 0.000033 0.503592 0.215849 903.29 907.30 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/BJ01_p3_nsp15_VIPR_ALG4_1002824416_19693_20814_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 30 ls = 374
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 23 23 23 23 23 23 | Ser TCT 3 3 3 3 3 3 | Tyr TAT 10 10 10 10 10 10 | Cys TGT 8 8 8 8 8 8
TTC 3 3 3 3 3 3 | TCC 1 1 1 1 1 1 | TAC 2 2 2 2 2 2 | TGC 2 2 2 2 2 2
Leu TTA 15 15 15 15 15 15 | TCA 7 7 7 7 7 7 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 12 12 12 12 12 12 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 5 5 5 5 5 5
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 4 4 4 4 4 4 | Pro CCT 5 5 5 5 5 5 | His CAT 7 7 7 7 7 7 | Arg CGT 6 6 6 6 6 6
CTC 1 1 1 1 1 1 | CCC 0 0 0 0 0 0 | CAC 2 2 2 2 2 2 | CGC 1 1 1 1 1 1
CTA 4 4 4 4 4 4 | CCA 1 1 1 1 1 1 | Gln CAA 5 5 5 5 5 5 | CGA 2 2 2 2 2 2
CTG 2 2 2 2 2 2 | CCG 1 1 1 1 1 1 | CAG 3 3 3 3 3 3 | CGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 19 19 19 19 19 19 | Thr ACT 9 9 9 9 9 9 | Asn AAT 23 23 23 23 23 23 | Ser AGT 15 15 15 15 15 15
ATC 4 4 4 4 4 4 | ACC 0 0 0 0 0 0 | AAC 4 4 4 4 4 4 | AGC 4 4 4 4 4 4
ATA 6 5 6 6 6 6 | ACA 7 7 7 7 7 7 | Lys AAA 18 18 18 18 18 18 | Arg AGA 4 4 4 4 4 4
Met ATG 7 7 7 7 7 7 | ACG 0 0 0 0 0 0 | AAG 7 7 7 7 7 7 | AGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 23 23 23 23 23 23 | Ala GCT 8 8 8 8 8 8 | Asp GAT 26 26 26 26 26 26 | Gly GGT 17 17 17 17 17 17
GTC 2 2 2 2 2 2 | GCC 0 0 0 0 0 0 | GAC 5 5 5 5 5 5 | GGC 2 2 2 2 2 2
GTA 3 4 3 3 3 3 | GCA 2 2 2 2 2 2 | Glu GAA 11 11 11 11 11 11 | GGA 3 3 3 3 3 3
GTG 2 2 2 2 2 2 | GCG 1 1 1 1 1 1 | GAG 3 3 3 3 3 3 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 23 23 23 23 23 23 | Ser TCT 4 3 3 4 4 3 | Tyr TAT 11 10 10 10 11 10 | Cys TGT 8 8 8 8 8 8
TTC 2 3 3 3 2 3 | TCC 0 1 1 0 0 1 | TAC 2 2 2 2 2 2 | TGC 1 2 2 2 1 2
Leu TTA 13 15 15 15 13 15 | TCA 5 7 7 7 5 7 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 13 12 12 12 13 12 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 5 5 5 5 5 5
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 6 4 4 4 6 4 | Pro CCT 5 5 5 5 5 5 | His CAT 6 7 7 7 6 7 | Arg CGT 7 6 6 6 7 6
CTC 1 1 1 1 1 1 | CCC 0 0 0 0 0 0 | CAC 2 2 2 2 2 2 | CGC 2 1 1 1 2 1
CTA 4 4 4 4 4 4 | CCA 2 1 1 1 2 1 | Gln CAA 6 5 5 5 6 5 | CGA 1 2 2 2 1 2
CTG 1 2 2 2 1 2 | CCG 1 1 1 1 1 1 | CAG 2 3 3 3 2 3 | CGG 1 2 2 2 1 2
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 18 19 20 19 19 20 | Thr ACT 7 9 9 9 7 10 | Asn AAT 30 23 23 23 30 23 | Ser AGT 14 15 15 15 14 15
ATC 3 4 3 4 2 3 | ACC 2 0 0 0 2 0 | AAC 0 4 4 4 0 4 | AGC 7 4 4 4 7 4
ATA 7 6 6 6 7 6 | ACA 4 7 7 7 4 6 | Lys AAA 17 18 18 18 17 18 | Arg AGA 5 4 4 4 5 4
Met ATG 7 7 7 7 7 7 | ACG 0 0 0 0 0 0 | AAG 6 7 7 7 6 7 | AGG 0 2 2 2 0 2
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 22 23 23 23 22 23 | Ala GCT 8 8 8 8 8 8 | Asp GAT 23 26 26 26 23 26 | Gly GGT 18 17 17 17 18 17
GTC 2 2 2 2 2 2 | GCC 2 0 0 0 2 0 | GAC 7 5 5 5 7 5 | GGC 1 2 2 2 1 2
GTA 6 3 3 3 6 3 | GCA 4 2 2 2 4 2 | Glu GAA 10 11 11 11 10 11 | GGA 4 3 3 3 4 3
GTG 1 2 2 2 1 2 | GCG 1 1 1 1 1 1 | GAG 4 3 3 3 4 3 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 23 23 23 23 23 23 | Ser TCT 3 3 4 3 3 4 | Tyr TAT 10 10 11 10 10 11 | Cys TGT 8 8 8 8 8 8
TTC 3 3 2 3 3 2 | TCC 1 1 0 1 1 0 | TAC 2 2 2 2 2 2 | TGC 2 2 1 2 2 1
Leu TTA 15 15 13 15 15 13 | TCA 7 7 5 7 7 5 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 12 12 13 12 12 13 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 5 5 5 5 5 5
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 4 4 6 4 4 6 | Pro CCT 5 5 5 5 5 5 | His CAT 7 7 6 7 7 6 | Arg CGT 6 6 7 6 6 7
CTC 1 1 1 1 1 1 | CCC 0 0 0 0 0 0 | CAC 2 2 2 2 2 2 | CGC 1 1 2 1 1 2
CTA 4 4 4 4 4 4 | CCA 1 1 2 1 1 2 | Gln CAA 5 5 6 5 5 6 | CGA 2 2 1 2 2 1
CTG 2 2 1 2 2 1 | CCG 1 1 1 1 1 1 | CAG 3 3 2 3 3 2 | CGG 2 2 1 2 2 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 19 19 19 20 20 18 | Thr ACT 9 9 7 9 9 7 | Asn AAT 23 23 30 23 23 29 | Ser AGT 15 15 14 15 15 15
ATC 4 4 2 4 4 3 | ACC 0 0 2 0 0 2 | AAC 4 4 0 4 4 0 | AGC 4 4 7 4 4 7
ATA 6 6 7 6 6 7 | ACA 7 7 4 7 7 4 | Lys AAA 18 18 17 18 18 17 | Arg AGA 4 4 5 4 4 5
Met ATG 7 7 7 6 6 7 | ACG 0 0 0 0 0 0 | AAG 7 7 6 7 7 6 | AGG 2 2 0 2 2 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 23 23 22 23 23 22 | Ala GCT 8 8 8 8 8 8 | Asp GAT 26 26 23 26 26 25 | Gly GGT 17 17 18 17 17 18
GTC 2 2 2 2 2 2 | GCC 0 0 2 0 0 2 | GAC 5 5 7 5 5 5 | GGC 2 2 1 2 2 1
GTA 3 3 6 3 3 6 | GCA 2 2 4 2 2 4 | Glu GAA 11 11 10 11 11 10 | GGA 3 3 4 3 3 4
GTG 2 2 1 2 2 1 | GCG 1 1 1 1 1 1 | GAG 3 3 4 3 3 4 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 23 23 23 23 23 23 | Ser TCT 3 4 3 3 3 3 | Tyr TAT 10 11 10 10 10 10 | Cys TGT 8 8 8 8 8 8
TTC 3 2 3 3 3 3 | TCC 1 0 1 1 1 1 | TAC 2 2 2 2 2 2 | TGC 2 1 2 2 2 2
Leu TTA 15 13 15 15 15 15 | TCA 7 5 7 7 7 7 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 12 13 12 12 12 12 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 5 5 5 5 5 5
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 4 6 4 4 4 4 | Pro CCT 5 5 5 5 5 5 | His CAT 7 6 7 8 7 7 | Arg CGT 6 7 6 6 6 6
CTC 1 1 1 1 1 1 | CCC 0 0 0 0 0 0 | CAC 2 2 2 2 2 2 | CGC 1 2 1 1 1 1
CTA 4 4 4 4 4 4 | CCA 1 2 1 1 1 1 | Gln CAA 5 6 5 5 5 5 | CGA 2 1 2 2 2 2
CTG 2 1 2 2 2 2 | CCG 1 1 1 1 1 1 | CAG 3 2 3 3 3 3 | CGG 2 1 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 19 19 19 20 20 20 | Thr ACT 9 7 9 10 10 9 | Asn AAT 23 30 23 22 23 23 | Ser AGT 15 14 15 15 15 15
ATC 4 2 4 3 3 3 | ACC 0 2 0 0 0 0 | AAC 4 0 4 4 4 4 | AGC 4 7 4 4 4 4
ATA 6 7 6 6 6 6 | ACA 7 4 7 6 6 7 | Lys AAA 18 17 18 18 18 18 | Arg AGA 4 5 4 4 4 4
Met ATG 7 7 7 7 7 7 | ACG 0 0 0 0 0 0 | AAG 7 6 7 7 7 7 | AGG 2 0 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 23 22 23 23 23 23 | Ala GCT 8 8 8 8 8 8 | Asp GAT 26 23 26 26 26 26 | Gly GGT 17 18 17 17 17 17
GTC 2 2 2 2 2 2 | GCC 0 2 0 0 0 0 | GAC 5 7 5 5 5 5 | GGC 2 1 2 2 2 2
GTA 3 6 3 3 3 3 | GCA 2 4 2 2 2 2 | Glu GAA 11 10 11 11 11 11 | GGA 3 4 3 3 3 3
GTG 2 1 2 2 2 2 | GCG 1 1 1 1 1 1 | GAG 3 4 3 3 3 3 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 23 23 23 23 23 23 | Ser TCT 3 3 3 3 4 3 | Tyr TAT 10 10 10 10 10 10 | Cys TGT 8 8 8 8 8 8
TTC 3 3 3 3 3 3 | TCC 1 1 1 1 0 1 | TAC 2 2 2 2 2 2 | TGC 2 2 2 2 2 2
Leu TTA 15 15 15 15 15 15 | TCA 7 7 7 7 7 7 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 12 12 12 12 12 12 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 5 5 5 5 5 5
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 4 4 4 4 4 4 | Pro CCT 5 5 5 5 5 5 | His CAT 7 7 7 8 7 7 | Arg CGT 6 6 6 6 6 6
CTC 1 1 1 1 1 1 | CCC 0 0 0 0 0 0 | CAC 2 2 2 2 2 2 | CGC 1 1 1 1 1 1
CTA 4 3 4 4 4 3 | CCA 1 1 1 1 1 1 | Gln CAA 5 5 5 5 5 5 | CGA 2 2 2 2 2 2
CTG 2 2 2 2 2 2 | CCG 1 1 1 1 1 1 | CAG 3 3 3 3 3 3 | CGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 19 19 20 20 19 19 | Thr ACT 9 9 9 10 9 9 | Asn AAT 23 23 23 22 23 23 | Ser AGT 15 15 15 15 15 15
ATC 4 4 4 3 4 4 | ACC 0 0 0 0 0 0 | AAC 4 4 4 4 4 4 | AGC 4 4 4 4 4 4
ATA 6 6 6 6 6 6 | ACA 7 7 7 6 7 7 | Lys AAA 18 19 18 18 18 19 | Arg AGA 4 4 4 4 4 4
Met ATG 7 7 6 7 7 7 | ACG 0 0 0 0 0 0 | AAG 7 7 7 7 7 7 | AGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 23 23 23 23 23 23 | Ala GCT 8 8 8 8 8 8 | Asp GAT 26 26 26 26 26 26 | Gly GGT 17 17 17 17 17 17
GTC 2 2 2 2 2 2 | GCC 0 0 0 0 0 0 | GAC 5 5 5 5 5 5 | GGC 2 2 2 2 2 2
GTA 3 3 3 3 3 3 | GCA 2 2 2 2 2 2 | Glu GAA 11 11 11 11 11 11 | GGA 3 3 3 3 3 3
GTG 2 2 2 2 2 2 | GCG 1 1 1 1 1 1 | GAG 3 3 3 3 3 3 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C14
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.38057 C:0.11052 A:0.30570 G:0.20321
#2: C19
position 1: T:0.24332 C:0.12299 A:0.34225 G:0.29144
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.38057 C:0.11052 A:0.30481 G:0.20410
#3: C11
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.38057 C:0.11052 A:0.30570 G:0.20321
#4: C24
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.38057 C:0.11052 A:0.30570 G:0.20321
#5: C9
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.38057 C:0.11052 A:0.30570 G:0.20321
#6: C15
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.38057 C:0.11052 A:0.30570 G:0.20321
#7: C30
position 1: T:0.23262 C:0.12567 A:0.33957 G:0.30214
position 2: T:0.34492 C:0.12032 A:0.33690 G:0.19786
position 3: T:0.56150 C:0.09091 A:0.23529 G:0.11230
Average T:0.37968 C:0.11230 A:0.30392 G:0.20410
#8: C5
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.38057 C:0.11052 A:0.30570 G:0.20321
#9: C2
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55348 C:0.08556 A:0.23529 G:0.12567
Average T:0.38146 C:0.10963 A:0.30570 G:0.20321
#10: C33
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55348 C:0.08556 A:0.23529 G:0.12567
Average T:0.38146 C:0.10963 A:0.30570 G:0.20321
#11: C38
position 1: T:0.23262 C:0.12567 A:0.33957 G:0.30214
position 2: T:0.34492 C:0.12032 A:0.33690 G:0.19786
position 3: T:0.56417 C:0.08824 A:0.23529 G:0.11230
Average T:0.38057 C:0.11141 A:0.30392 G:0.20410
#12: C22
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55615 C:0.08556 A:0.23262 G:0.12567
Average T:0.38235 C:0.10963 A:0.30481 G:0.20321
#13: C18
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.38057 C:0.11052 A:0.30570 G:0.20321
#14: C16
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.38057 C:0.11052 A:0.30570 G:0.20321
#15: C12
position 1: T:0.23262 C:0.12567 A:0.33957 G:0.30214
position 2: T:0.34492 C:0.12032 A:0.33690 G:0.19786
position 3: T:0.56417 C:0.08824 A:0.23529 G:0.11230
Average T:0.38057 C:0.11141 A:0.30392 G:0.20410
#16: C7
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55348 C:0.08824 A:0.23529 G:0.12299
Average T:0.38146 C:0.11052 A:0.30570 G:0.20232
#17: C8
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55348 C:0.08824 A:0.23529 G:0.12299
Average T:0.38146 C:0.11052 A:0.30570 G:0.20232
#18: C35
position 1: T:0.23262 C:0.12567 A:0.33957 G:0.30214
position 2: T:0.34492 C:0.12032 A:0.33422 G:0.20053
position 3: T:0.56684 C:0.08556 A:0.23529 G:0.11230
Average T:0.38146 C:0.11052 A:0.30303 G:0.20499
#19: C10
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.38057 C:0.11052 A:0.30570 G:0.20321
#20: C37
position 1: T:0.23262 C:0.12567 A:0.33957 G:0.30214
position 2: T:0.34492 C:0.12032 A:0.33690 G:0.19786
position 3: T:0.56417 C:0.08824 A:0.23529 G:0.11230
Average T:0.38057 C:0.11141 A:0.30392 G:0.20410
#21: C23
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.38057 C:0.11052 A:0.30570 G:0.20321
#22: C21
position 1: T:0.24332 C:0.12567 A:0.34225 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55615 C:0.08556 A:0.23262 G:0.12567
Average T:0.38235 C:0.11052 A:0.30392 G:0.20321
#23: C26
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55615 C:0.08556 A:0.23262 G:0.12567
Average T:0.38235 C:0.10963 A:0.30481 G:0.20321
#24: C1
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55348 C:0.08556 A:0.23529 G:0.12567
Average T:0.38146 C:0.10963 A:0.30570 G:0.20321
#25: C28
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.38057 C:0.11052 A:0.30570 G:0.20321
#26: C31
position 1: T:0.24332 C:0.12032 A:0.34759 G:0.28877
position 2: T:0.34492 C:0.12032 A:0.33957 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.37968 C:0.10963 A:0.30749 G:0.20321
#27: C6
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55348 C:0.08824 A:0.23529 G:0.12299
Average T:0.38146 C:0.11052 A:0.30570 G:0.20232
#28: C25
position 1: T:0.24332 C:0.12567 A:0.34225 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55615 C:0.08556 A:0.23262 G:0.12567
Average T:0.38235 C:0.11052 A:0.30392 G:0.20321
#29: C34
position 1: T:0.24332 C:0.12299 A:0.34492 G:0.28877
position 2: T:0.34759 C:0.12032 A:0.33690 G:0.19519
position 3: T:0.55348 C:0.08556 A:0.23529 G:0.12567
Average T:0.38146 C:0.10963 A:0.30570 G:0.20321
#30: C4
position 1: T:0.24332 C:0.12032 A:0.34759 G:0.28877
position 2: T:0.34492 C:0.12032 A:0.33957 G:0.19519
position 3: T:0.55080 C:0.08824 A:0.23529 G:0.12567
Average T:0.37968 C:0.10963 A:0.30749 G:0.20321
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 690 | Ser S TCT 97 | Tyr Y TAT 305 | Cys C TGT 240
TTC 85 | TCC 23 | TAC 60 | TGC 55
Leu L TTA 440 | TCA 200 | *** * TAA 0 | *** * TGA 0
TTG 365 | TCG 0 | TAG 0 | Trp W TGG 150
------------------------------------------------------------------------------
Leu L CTT 130 | Pro P CCT 150 | His H CAT 207 | Arg R CGT 185
CTC 30 | CCC 0 | CAC 60 | CGC 35
CTA 118 | CCA 35 | Gln Q CAA 155 | CGA 55
CTG 55 | CCG 30 | CAG 85 | CGG 55
------------------------------------------------------------------------------
Ile I ATT 577 | Thr T ACT 264 | Asn N AAT 722 | Ser S AGT 446
ATC 106 | ACC 10 | AAC 100 | AGC 135
ATA 184 | ACA 191 | Lys K AAA 537 | Arg R AGA 125
Met M ATG 207 | ACG 0 | AAG 205 | AGG 50
------------------------------------------------------------------------------
Val V GTT 685 | Ala A GCT 240 | Asp D GAT 767 | Gly G GGT 515
GTC 60 | GCC 10 | GAC 158 | GGC 55
GTA 106 | GCA 70 | Glu E GAA 325 | GGA 95
GTG 55 | GCG 30 | GAG 95 | GGG 0
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.24153 C:0.12344 A:0.34394 G:0.29109
position 2: T:0.34697 C:0.12032 A:0.33699 G:0.19572
position 3: T:0.55437 C:0.08752 A:0.23494 G:0.12317
Average T:0.38096 C:0.11043 A:0.30529 G:0.20333
Model 1: NearlyNeutral (2 categories)
TREE # 1: (24, 9, ((22, 28), 12, 23), (19, 3, (((15, 20, 11), 7), 18), 1, 6, 14, 13, 2, 21, 4, 25, (26, 30), (10, 29), 8, (27, 16, 17), 5)); MP score: 70
lnL(ntime: 39 np: 42): -1756.408119 +0.000000
31..24 31..9 31..32 32..33 33..22 33..28 32..12 32..23 31..34 34..19 34..3 34..35 35..36 36..37 37..15 37..20 37..11 36..7 35..18 34..1 34..6 34..14 34..13 34..2 34..21 34..4 34..25 34..38 38..26 38..30 34..39 39..10 39..29 34..8 34..40 40..27 40..16 40..17 34..5
0.000004 0.000004 0.002849 0.002858 0.000004 0.000004 0.000004 0.000004 0.002840 0.000004 0.000004 0.218964 0.008719 0.002887 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.002832 0.000004 0.000004 0.000004 0.005683 0.000004 0.000004 0.002834 0.000004 0.000004 0.000004 0.002832 0.000004 0.000004 0.000004 0.000004 4.208603 0.923866 0.040757
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.253414
(24: 0.000004, 9: 0.000004, ((22: 0.000004, 28: 0.000004): 0.002858, 12: 0.000004, 23: 0.000004): 0.002849, (19: 0.000004, 3: 0.000004, (((15: 0.000004, 20: 0.000004, 11: 0.000004): 0.002887, 7: 0.000004): 0.008719, 18: 0.000004): 0.218964, 1: 0.000004, 6: 0.000004, 14: 0.000004, 13: 0.000004, 2: 0.002832, 21: 0.000004, 4: 0.000004, 25: 0.000004, (26: 0.000004, 30: 0.000004): 0.005683, (10: 0.000004, 29: 0.000004): 0.002834, 8: 0.000004, (27: 0.000004, 16: 0.000004, 17: 0.000004): 0.002832, 5: 0.000004): 0.002840);
(C1: 0.000004, C2: 0.000004, ((C21: 0.000004, C25: 0.000004): 0.002858, C22: 0.000004, C26: 0.000004): 0.002849, (C10: 0.000004, C11: 0.000004, (((C12: 0.000004, C37: 0.000004, C38: 0.000004): 0.002887, C30: 0.000004): 0.008719, C35: 0.000004): 0.218964, C14: 0.000004, C15: 0.000004, C16: 0.000004, C18: 0.000004, C19: 0.002832, C23: 0.000004, C24: 0.000004, C28: 0.000004, (C31: 0.000004, C4: 0.000004): 0.005683, (C33: 0.000004, C34: 0.000004): 0.002834, C5: 0.000004, (C6: 0.000004, C7: 0.000004, C8: 0.000004): 0.002832, C9: 0.000004): 0.002840);
Detailed output identifying parameters
kappa (ts/tv) = 4.20860
MLEs of dN/dS (w) for site classes (K=2)
p: 0.92387 0.07613
w: 0.04076 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..24 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
31..9 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
31..32 0.003 945.9 176.1 0.1138 0.0004 0.0038 0.4 0.7
32..33 0.003 945.9 176.1 0.1138 0.0004 0.0038 0.4 0.7
33..22 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
33..28 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
32..12 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
32..23 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
31..34 0.003 945.9 176.1 0.1138 0.0004 0.0037 0.4 0.7
34..19 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..3 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..35 0.219 945.9 176.1 0.1138 0.0328 0.2887 31.1 50.8
35..36 0.009 945.9 176.1 0.1138 0.0013 0.0115 1.2 2.0
36..37 0.003 945.9 176.1 0.1138 0.0004 0.0038 0.4 0.7
37..15 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
37..20 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
37..11 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
36..7 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
35..18 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..1 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..6 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..14 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..13 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..2 0.003 945.9 176.1 0.1138 0.0004 0.0037 0.4 0.7
34..21 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..4 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..25 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..38 0.006 945.9 176.1 0.1138 0.0009 0.0075 0.8 1.3
38..26 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
38..30 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..39 0.003 945.9 176.1 0.1138 0.0004 0.0037 0.4 0.7
39..10 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
39..29 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..8 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..40 0.003 945.9 176.1 0.1138 0.0004 0.0037 0.4 0.7
40..27 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
40..16 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
40..17 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
34..5 0.000 945.9 176.1 0.1138 0.0000 0.0000 0.0 0.0
Time used: 2:12
Model 2: PositiveSelection (3 categories)
TREE # 1: (24, 9, ((22, 28), 12, 23), (19, 3, (((15, 20, 11), 7), 18), 1, 6, 14, 13, 2, 21, 4, 25, (26, 30), (10, 29), 8, (27, 16, 17), 5)); MP score: 70
check convergence..
lnL(ntime: 39 np: 44): -1756.294110 +0.000000
31..24 31..9 31..32 32..33 33..22 33..28 32..12 32..23 31..34 34..19 34..3 34..35 35..36 36..37 37..15 37..20 37..11 36..7 35..18 34..1 34..6 34..14 34..13 34..2 34..21 34..4 34..25 34..38 38..26 38..30 34..39 39..10 39..29 34..8 34..40 40..27 40..16 40..17 34..5
0.000004 0.000004 0.002890 0.002897 0.000004 0.000004 0.000004 0.000004 0.002881 0.000004 0.000004 0.224307 0.008826 0.002920 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.002873 0.000004 0.000004 0.000004 0.005759 0.000004 0.000004 0.002874 0.000004 0.000004 0.000004 0.002873 0.000004 0.000004 0.000004 0.000004 4.257676 0.974215 0.000000 0.063989 2.330719
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.259216
(24: 0.000004, 9: 0.000004, ((22: 0.000004, 28: 0.000004): 0.002897, 12: 0.000004, 23: 0.000004): 0.002890, (19: 0.000004, 3: 0.000004, (((15: 0.000004, 20: 0.000004, 11: 0.000004): 0.002920, 7: 0.000004): 0.008826, 18: 0.000004): 0.224307, 1: 0.000004, 6: 0.000004, 14: 0.000004, 13: 0.000004, 2: 0.002873, 21: 0.000004, 4: 0.000004, 25: 0.000004, (26: 0.000004, 30: 0.000004): 0.005759, (10: 0.000004, 29: 0.000004): 0.002874, 8: 0.000004, (27: 0.000004, 16: 0.000004, 17: 0.000004): 0.002873, 5: 0.000004): 0.002881);
(C1: 0.000004, C2: 0.000004, ((C21: 0.000004, C25: 0.000004): 0.002897, C22: 0.000004, C26: 0.000004): 0.002890, (C10: 0.000004, C11: 0.000004, (((C12: 0.000004, C37: 0.000004, C38: 0.000004): 0.002920, C30: 0.000004): 0.008826, C35: 0.000004): 0.224307, C14: 0.000004, C15: 0.000004, C16: 0.000004, C18: 0.000004, C19: 0.002873, C23: 0.000004, C24: 0.000004, C28: 0.000004, (C31: 0.000004, C4: 0.000004): 0.005759, (C33: 0.000004, C34: 0.000004): 0.002874, C5: 0.000004, (C6: 0.000004, C7: 0.000004, C8: 0.000004): 0.002873, C9: 0.000004): 0.002881);
Detailed output identifying parameters
kappa (ts/tv) = 4.25768
MLEs of dN/dS (w) for site classes (K=3)
p: 0.97421 0.00000 0.02579
w: 0.06399 1.00000 2.33072
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..24 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
31..9 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
31..32 0.003 945.7 176.3 0.1224 0.0005 0.0037 0.4 0.7
32..33 0.003 945.7 176.3 0.1224 0.0005 0.0037 0.4 0.7
33..22 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
33..28 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
32..12 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
32..23 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
31..34 0.003 945.7 176.3 0.1224 0.0005 0.0037 0.4 0.7
34..19 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..3 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..35 0.224 945.7 176.3 0.1224 0.0352 0.2872 33.3 50.6
35..36 0.009 945.7 176.3 0.1224 0.0014 0.0113 1.3 2.0
36..37 0.003 945.7 176.3 0.1224 0.0005 0.0037 0.4 0.7
37..15 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
37..20 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
37..11 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
36..7 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
35..18 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..1 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..6 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..14 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..13 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..2 0.003 945.7 176.3 0.1224 0.0005 0.0037 0.4 0.6
34..21 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..4 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..25 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..38 0.006 945.7 176.3 0.1224 0.0009 0.0074 0.9 1.3
38..26 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
38..30 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..39 0.003 945.7 176.3 0.1224 0.0005 0.0037 0.4 0.6
39..10 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
39..29 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..8 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..40 0.003 945.7 176.3 0.1224 0.0005 0.0037 0.4 0.6
40..27 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
40..16 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
40..17 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
34..5 0.000 945.7 176.3 0.1224 0.0000 0.0000 0.0 0.0
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C14)
Pr(w>1) post mean +- SE for w
286 L 0.958* 2.235
332 S 0.889 2.079
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C14)
Pr(w>1) post mean +- SE for w
286 L 0.775 2.540 +- 1.758
332 S 0.646 2.168 +- 1.622
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.411 0.266 0.146 0.078 0.043 0.024 0.014 0.009 0.006 0.004
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.003
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.011 0.986
sum of density on p0-p1 = 1.000000
Time used: 8:29
Model 7: beta (10 categories)
TREE # 1: (24, 9, ((22, 28), 12, 23), (19, 3, (((15, 20, 11), 7), 18), 1, 6, 14, 13, 2, 21, 4, 25, (26, 30), (10, 29), 8, (27, 16, 17), 5)); MP score: 70
lnL(ntime: 39 np: 42): -1756.488869 +0.000000
31..24 31..9 31..32 32..33 33..22 33..28 32..12 32..23 31..34 34..19 34..3 34..35 35..36 36..37 37..15 37..20 37..11 36..7 35..18 34..1 34..6 34..14 34..13 34..2 34..21 34..4 34..25 34..38 38..26 38..30 34..39 39..10 39..29 34..8 34..40 40..27 40..16 40..17 34..5
0.000004 0.000004 0.002842 0.002854 0.000004 0.000004 0.000004 0.000004 0.002834 0.000004 0.000004 0.218390 0.008702 0.002881 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.002826 0.000004 0.000004 0.000004 0.005671 0.000004 0.000004 0.002827 0.000004 0.000004 0.000004 0.002825 0.000004 0.000004 0.000004 0.000004 4.221196 0.080562 0.617020
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.252767
(24: 0.000004, 9: 0.000004, ((22: 0.000004, 28: 0.000004): 0.002854, 12: 0.000004, 23: 0.000004): 0.002842, (19: 0.000004, 3: 0.000004, (((15: 0.000004, 20: 0.000004, 11: 0.000004): 0.002881, 7: 0.000004): 0.008702, 18: 0.000004): 0.218390, 1: 0.000004, 6: 0.000004, 14: 0.000004, 13: 0.000004, 2: 0.002826, 21: 0.000004, 4: 0.000004, 25: 0.000004, (26: 0.000004, 30: 0.000004): 0.005671, (10: 0.000004, 29: 0.000004): 0.002827, 8: 0.000004, (27: 0.000004, 16: 0.000004, 17: 0.000004): 0.002825, 5: 0.000004): 0.002834);
(C1: 0.000004, C2: 0.000004, ((C21: 0.000004, C25: 0.000004): 0.002854, C22: 0.000004, C26: 0.000004): 0.002842, (C10: 0.000004, C11: 0.000004, (((C12: 0.000004, C37: 0.000004, C38: 0.000004): 0.002881, C30: 0.000004): 0.008702, C35: 0.000004): 0.218390, C14: 0.000004, C15: 0.000004, C16: 0.000004, C18: 0.000004, C19: 0.002826, C23: 0.000004, C24: 0.000004, C28: 0.000004, (C31: 0.000004, C4: 0.000004): 0.005671, (C33: 0.000004, C34: 0.000004): 0.002827, C5: 0.000004, (C6: 0.000004, C7: 0.000004, C8: 0.000004): 0.002825, C9: 0.000004): 0.002834);
Detailed output identifying parameters
kappa (ts/tv) = 4.22120
Parameters in M7 (beta):
p = 0.08056 q = 0.61702
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00000 0.00001 0.00011 0.00138 0.01094 0.06342 0.27531 0.79315
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..24 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
31..9 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
31..32 0.003 945.9 176.1 0.1144 0.0004 0.0037 0.4 0.7
32..33 0.003 945.9 176.1 0.1144 0.0004 0.0038 0.4 0.7
33..22 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
33..28 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
32..12 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
32..23 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
31..34 0.003 945.9 176.1 0.1144 0.0004 0.0037 0.4 0.7
34..19 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..3 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..35 0.218 945.9 176.1 0.1144 0.0329 0.2872 31.1 50.6
35..36 0.009 945.9 176.1 0.1144 0.0013 0.0114 1.2 2.0
36..37 0.003 945.9 176.1 0.1144 0.0004 0.0038 0.4 0.7
37..15 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
37..20 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
37..11 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
36..7 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
35..18 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..1 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..6 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..14 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..13 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..2 0.003 945.9 176.1 0.1144 0.0004 0.0037 0.4 0.7
34..21 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..4 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..25 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..38 0.006 945.9 176.1 0.1144 0.0009 0.0075 0.8 1.3
38..26 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
38..30 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..39 0.003 945.9 176.1 0.1144 0.0004 0.0037 0.4 0.7
39..10 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
39..29 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..8 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..40 0.003 945.9 176.1 0.1144 0.0004 0.0037 0.4 0.7
40..27 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
40..16 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
40..17 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
34..5 0.000 945.9 176.1 0.1144 0.0000 0.0000 0.0 0.0
Time used: 25:35
Model 8: beta&w>1 (11 categories)
TREE # 1: (24, 9, ((22, 28), 12, 23), (19, 3, (((15, 20, 11), 7), 18), 1, 6, 14, 13, 2, 21, 4, 25, (26, 30), (10, 29), 8, (27, 16, 17), 5)); MP score: 70
check convergence..
lnL(ntime: 39 np: 44): -1756.295842 +0.000000
31..24 31..9 31..32 32..33 33..22 33..28 32..12 32..23 31..34 34..19 34..3 34..35 35..36 36..37 37..15 37..20 37..11 36..7 35..18 34..1 34..6 34..14 34..13 34..2 34..21 34..4 34..25 34..38 38..26 38..30 34..39 39..10 39..29 34..8 34..40 40..27 40..16 40..17 34..5
0.000004 0.000004 0.002890 0.002897 0.000004 0.000004 0.000004 0.000004 0.002881 0.000004 0.000004 0.224305 0.008826 0.002920 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.002873 0.000004 0.000004 0.000004 0.005759 0.000004 0.000004 0.002874 0.000004 0.000004 0.000004 0.002873 0.000004 0.000004 0.000004 0.000004 4.258092 0.974775 6.887094 98.994847 2.353225
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.259214
(24: 0.000004, 9: 0.000004, ((22: 0.000004, 28: 0.000004): 0.002897, 12: 0.000004, 23: 0.000004): 0.002890, (19: 0.000004, 3: 0.000004, (((15: 0.000004, 20: 0.000004, 11: 0.000004): 0.002920, 7: 0.000004): 0.008826, 18: 0.000004): 0.224305, 1: 0.000004, 6: 0.000004, 14: 0.000004, 13: 0.000004, 2: 0.002873, 21: 0.000004, 4: 0.000004, 25: 0.000004, (26: 0.000004, 30: 0.000004): 0.005759, (10: 0.000004, 29: 0.000004): 0.002874, 8: 0.000004, (27: 0.000004, 16: 0.000004, 17: 0.000004): 0.002873, 5: 0.000004): 0.002881);
(C1: 0.000004, C2: 0.000004, ((C21: 0.000004, C25: 0.000004): 0.002897, C22: 0.000004, C26: 0.000004): 0.002890, (C10: 0.000004, C11: 0.000004, (((C12: 0.000004, C37: 0.000004, C38: 0.000004): 0.002920, C30: 0.000004): 0.008826, C35: 0.000004): 0.224305, C14: 0.000004, C15: 0.000004, C16: 0.000004, C18: 0.000004, C19: 0.002873, C23: 0.000004, C24: 0.000004, C28: 0.000004, (C31: 0.000004, C4: 0.000004): 0.005759, (C33: 0.000004, C34: 0.000004): 0.002874, C5: 0.000004, (C6: 0.000004, C7: 0.000004, C8: 0.000004): 0.002873, C9: 0.000004): 0.002881);
Detailed output identifying parameters
kappa (ts/tv) = 4.25809
Parameters in M8 (beta&w>1):
p0 = 0.97478 p = 6.88709 q = 98.99485
(p1 = 0.02522) w = 2.35323
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09748 0.09748 0.09748 0.09748 0.09748 0.09748 0.09748 0.09748 0.09748 0.09748 0.02522
w: 0.03099 0.04092 0.04774 0.05368 0.05941 0.06531 0.07177 0.07941 0.08962 0.10842 2.35323
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..24 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
31..9 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
31..32 0.003 945.7 176.3 0.1225 0.0005 0.0037 0.4 0.7
32..33 0.003 945.7 176.3 0.1225 0.0005 0.0037 0.4 0.7
33..22 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
33..28 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
32..12 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
32..23 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
31..34 0.003 945.7 176.3 0.1225 0.0005 0.0037 0.4 0.7
34..19 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..3 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..35 0.224 945.7 176.3 0.1225 0.0352 0.2872 33.3 50.6
35..36 0.009 945.7 176.3 0.1225 0.0014 0.0113 1.3 2.0
36..37 0.003 945.7 176.3 0.1225 0.0005 0.0037 0.4 0.7
37..15 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
37..20 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
37..11 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
36..7 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
35..18 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..1 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..6 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..14 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..13 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..2 0.003 945.7 176.3 0.1225 0.0005 0.0037 0.4 0.6
34..21 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..4 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..25 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..38 0.006 945.7 176.3 0.1225 0.0009 0.0074 0.9 1.3
38..26 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
38..30 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..39 0.003 945.7 176.3 0.1225 0.0005 0.0037 0.4 0.6
39..10 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
39..29 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..8 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..40 0.003 945.7 176.3 0.1225 0.0005 0.0037 0.4 0.6
40..27 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
40..16 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
40..17 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
34..5 0.000 945.7 176.3 0.1225 0.0000 0.0000 0.0 0.0
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C14)
Pr(w>1) post mean +- SE for w
286 L 0.952* 2.244
332 S 0.874 2.067
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C14)
Pr(w>1) post mean +- SE for w
286 L 0.836 1.864 +- 1.142
332 S 0.736 1.676 +- 1.141
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 0.999 0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.001 0.011 0.043 0.101 0.183 0.279 0.382
ws: 0.654 0.220 0.075 0.028 0.012 0.005 0.003 0.001 0.001 0.000
Time used: 52:05
Model 1: NearlyNeutral -1756.408119 Model 2: PositiveSelection -1756.294110 Model 7: beta -1756.488869 Model 8: beta&w>1 -1756.295842 Model 2 vs 1 .228018 Model 8 vs 7 .386054
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
