--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1473.08 -1497.91
2 -1473.03 -1499.90
--------------------------------------
TOTAL -1473.05 -1499.34
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.042163 0.000068 0.027914 0.059576 0.041299 1210.69 1303.25 1.000
r(A<->C){all} 0.102930 0.003094 0.013689 0.212243 0.094306 222.98 260.95 1.000
r(A<->G){all} 0.270458 0.005550 0.128420 0.413899 0.266122 318.33 342.48 1.000
r(A<->T){all} 0.057329 0.000868 0.008573 0.114493 0.052801 391.47 445.72 1.000
r(C<->G){all} 0.040544 0.001557 0.000007 0.120794 0.028896 255.15 344.94 1.000
r(C<->T){all} 0.479918 0.007130 0.318322 0.643048 0.482065 324.79 390.73 1.000
r(G<->T){all} 0.048822 0.000815 0.006895 0.107108 0.043082 635.44 652.10 1.000
pi(A){all} 0.262077 0.000215 0.235155 0.291172 0.261842 879.36 921.92 1.000
pi(C){all} 0.141573 0.000139 0.119448 0.165365 0.141057 740.81 933.71 1.000
pi(G){all} 0.211266 0.000179 0.187157 0.238652 0.211086 996.55 1016.98 1.000
pi(T){all} 0.385084 0.000255 0.356350 0.418785 0.385181 826.24 835.97 1.000
alpha{1,2} 0.861883 0.845009 0.000215 2.658506 0.546564 737.18 993.95 1.000
alpha{3} 1.008901 0.887577 0.001636 2.935658 0.728591 981.39 988.28 1.000
pinvar{all} 0.487807 0.048606 0.053839 0.827892 0.516206 287.23 428.82 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -1368.181027
Model 2: PositiveSelection -1368.181027
Model 7: beta -1368.279628
Model 8: beta&w>1 -1368.181028
Model 2 vs 1 0
Model 8 vs 7 .197200
-- Starting log on Wed Nov 23 21:54:13 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.16 sec, SCORE=1000, Nseq=38, Len=303
C1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C2 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C3 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C4 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C5 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C6 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C7 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C8 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C9 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C10 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C11 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C12 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C13 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C14 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C15 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C16 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C17 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C18 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C19 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C20 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C21 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C22 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C23 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C24 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C25 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C26 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C27 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C28 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C29 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C30 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C31 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C32 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C33 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C34 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C35 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C36 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C37 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C38 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
****************:*************************** *****
C1 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C2 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C3 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C4 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C5 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C6 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C7 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C8 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C9 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C10 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C11 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C12 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C13 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C14 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C15 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C16 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C17 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C18 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C19 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C20 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C21 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C22 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C23 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C24 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C25 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C26 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C27 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C28 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C29 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C30 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C31 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C32 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C33 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C34 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C35 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C36 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C37 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C38 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
**************************************************
C1 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C2 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C3 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C4 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C5 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C6 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C7 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C8 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C9 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C10 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C11 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C12 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C13 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C14 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C15 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C16 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C17 YTFGNVKPGETFTVLAAYNGPPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C18 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C19 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C20 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C21 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C22 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C23 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C24 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C25 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C26 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C27 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C28 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C29 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C30 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C31 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C32 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C33 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C34 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C35 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C36 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C37 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C38 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
**** *************** *****************************
C1 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C2 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C3 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C4 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C5 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C6 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C7 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C8 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C9 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C10 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C11 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C12 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C13 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C14 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C15 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C16 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C17 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C18 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C19 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C20 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C21 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C22 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C23 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C24 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C25 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C26 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C27 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C28 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C29 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C30 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C31 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C32 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C33 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C34 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C35 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYIQ
C36 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C37 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C38 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
***************************.********************:*
C1 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C2 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C3 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C4 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C5 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C6 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C7 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C8 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C9 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C10 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C11 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C12 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C13 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C14 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C15 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C16 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C17 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C18 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C19 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C20 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C21 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C22 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C23 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C24 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C25 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C26 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C27 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C28 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C29 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C30 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C31 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C32 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C33 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C34 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C35 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C36 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C37 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C38 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
************************** ********:**************
C1 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C2 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C3 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C4 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C5 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C6 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C7 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C8 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C9 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C10 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C11 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C12 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C13 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C14 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C15 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C16 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C17 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C18 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C19 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C20 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C21 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C22 LASMTGVSIEILLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C23 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C24 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C25 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C26 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C27 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C28 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C29 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C30 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C31 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C32 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C33 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C34 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C35 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C36 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C37 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C38 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
********** ***************************************
C1 KLQ
C2 KLQ
C3 KLQ
C4 KLQ
C5 KLQ
C6 KLQ
C7 KLQ
C8 KLQ
C9 KLQ
C10 KLQ
C11 KLQ
C12 KLQ
C13 KLQ
C14 KLQ
C15 KLQ
C16 KLQ
C17 KLQ
C18 KLQ
C19 KLQ
C20 KLQ
C21 KLQ
C22 KLQ
C23 KLQ
C24 KLQ
C25 KLQ
C26 KLQ
C27 KLQ
C28 KLQ
C29 KLQ
C30 KLQ
C31 KLQ
C32 KLQ
C33 KLQ
C34 KLQ
C35 KLQ
C36 KLQ
C37 KLQ
C38 KLQ
***
-- Starting log on Wed Nov 23 21:56:19 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.77 sec, SCORE=1000, Nseq=38, Len=303
C1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C2 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C3 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C4 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C5 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C6 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C7 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C8 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C9 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C10 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C11 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C12 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C13 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C14 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C15 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C16 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C17 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C18 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C19 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C20 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C21 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C22 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C23 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C24 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C25 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C26 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C27 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C28 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C29 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C30 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C31 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C32 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C33 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C34 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C35 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C36 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C37 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C38 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
****************:*************************** *****
C1 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C2 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C3 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C4 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C5 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C6 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C7 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C8 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C9 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C10 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C11 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C12 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C13 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C14 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C15 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C16 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C17 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C18 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C19 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C20 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C21 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C22 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C23 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C24 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C25 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C26 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C27 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C28 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C29 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C30 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C31 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C32 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C33 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C34 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C35 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C36 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C37 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C38 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
**************************************************
C1 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C2 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C3 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C4 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C5 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C6 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C7 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C8 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C9 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C10 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C11 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C12 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C13 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C14 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C15 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C16 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C17 YTFGNVKPGETFTVLAAYNGPPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C18 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C19 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C20 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C21 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C22 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C23 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C24 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C25 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C26 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C27 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C28 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C29 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C30 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C31 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C32 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C33 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C34 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C35 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C36 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C37 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C38 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
**** *************** *****************************
C1 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C2 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C3 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C4 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C5 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C6 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C7 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C8 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C9 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C10 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C11 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C12 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C13 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C14 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C15 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C16 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C17 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C18 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C19 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C20 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C21 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C22 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C23 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C24 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C25 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C26 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C27 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C28 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C29 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C30 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C31 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C32 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C33 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C34 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C35 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYIQ
C36 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C37 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C38 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
***************************.********************:*
C1 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C2 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C3 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C4 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C5 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C6 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C7 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C8 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C9 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C10 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C11 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C12 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C13 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C14 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C15 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C16 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C17 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C18 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C19 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C20 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C21 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C22 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C23 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C24 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C25 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C26 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C27 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C28 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C29 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C30 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C31 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C32 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C33 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C34 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C35 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C36 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C37 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C38 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
************************** ********:**************
C1 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C2 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C3 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C4 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C5 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C6 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C7 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C8 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C9 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C10 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C11 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C12 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C13 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C14 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C15 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C16 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C17 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C18 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C19 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C20 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C21 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C22 LASMTGVSIEILLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C23 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C24 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C25 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C26 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C27 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C28 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C29 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C30 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C31 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C32 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C33 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C34 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C35 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C36 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C37 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C38 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
********** ***************************************
C1 KLQ
C2 KLQ
C3 KLQ
C4 KLQ
C5 KLQ
C6 KLQ
C7 KLQ
C8 KLQ
C9 KLQ
C10 KLQ
C11 KLQ
C12 KLQ
C13 KLQ
C14 KLQ
C15 KLQ
C16 KLQ
C17 KLQ
C18 KLQ
C19 KLQ
C20 KLQ
C21 KLQ
C22 KLQ
C23 KLQ
C24 KLQ
C25 KLQ
C26 KLQ
C27 KLQ
C28 KLQ
C29 KLQ
C30 KLQ
C31 KLQ
C32 KLQ
C33 KLQ
C34 KLQ
C35 KLQ
C36 KLQ
C37 KLQ
C38 KLQ
***
-- Starting log on Wed Nov 23 23:41:42 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result/gapped_alignment/codeml,BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 30 taxa and 909 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C11
Taxon 4 -> C12
Taxon 5 -> C14
Taxon 6 -> C15
Taxon 7 -> C16
Taxon 8 -> C18
Taxon 9 -> C19
Taxon 10 -> C2
Taxon 11 -> C21
Taxon 12 -> C22
Taxon 13 -> C23
Taxon 14 -> C24
Taxon 15 -> C25
Taxon 16 -> C26
Taxon 17 -> C28
Taxon 18 -> C30
Taxon 19 -> C31
Taxon 20 -> C33
Taxon 21 -> C34
Taxon 22 -> C35
Taxon 23 -> C37
Taxon 24 -> C38
Taxon 25 -> C4
Taxon 26 -> C5
Taxon 27 -> C6
Taxon 28 -> C7
Taxon 29 -> C8
Taxon 30 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1669246904
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1440996847
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 1677689837
Seed = 465755609
Swapseed = 1669246904
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 9 unique site patterns
Division 2 has 8 unique site patterns
Division 3 has 24 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -2503.904966 -- 82.122948
Chain 2 -- -2621.475332 -- 82.122948
Chain 3 -- -2536.327088 -- 82.122948
Chain 4 -- -2547.298667 -- 82.122948
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -2584.357778 -- 82.122948
Chain 2 -- -2566.931136 -- 82.122948
Chain 3 -- -2611.020603 -- 82.122948
Chain 4 -- -2538.946614 -- 82.122948
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-2503.905] (-2621.475) (-2536.327) (-2547.299) * [-2584.358] (-2566.931) (-2611.021) (-2538.947)
1000 -- (-1585.010) (-1559.551) (-1610.000) [-1511.221] * (-1606.994) [-1520.082] (-1545.563) (-1533.114) -- 0:00:00
2000 -- (-1508.100) (-1513.826) (-1532.045) [-1493.833] * [-1497.297] (-1514.421) (-1495.030) (-1513.219) -- 0:08:19
3000 -- (-1489.381) [-1494.469] (-1504.460) (-1497.576) * [-1489.091] (-1500.128) (-1493.287) (-1523.509) -- 0:11:04
4000 -- (-1490.502) (-1496.047) (-1510.549) [-1483.961] * (-1491.506) (-1494.567) [-1487.635] (-1497.128) -- 0:12:27
5000 -- [-1479.937] (-1512.847) (-1498.985) (-1482.966) * (-1493.897) (-1501.340) (-1485.446) [-1476.366] -- 0:09:57
Average standard deviation of split frequencies: 0.083339
6000 -- [-1477.524] (-1494.636) (-1490.647) (-1481.137) * (-1492.467) (-1495.741) (-1491.594) [-1481.991] -- 0:11:02
7000 -- (-1493.151) (-1492.131) (-1486.293) [-1477.947] * (-1496.783) (-1500.395) [-1482.558] (-1483.496) -- 0:11:49
8000 -- [-1488.110] (-1499.493) (-1489.791) (-1490.607) * (-1504.957) [-1478.180] (-1498.839) (-1490.165) -- 0:12:24
9000 -- (-1485.484) [-1484.260] (-1494.487) (-1490.028) * [-1476.376] (-1491.831) (-1484.367) (-1487.444) -- 0:11:00
10000 -- (-1489.909) [-1484.053] (-1502.072) (-1487.407) * (-1474.894) (-1495.156) (-1481.752) [-1475.963] -- 0:11:33
Average standard deviation of split frequencies: 0.090375
11000 -- [-1481.547] (-1500.446) (-1495.054) (-1502.072) * (-1474.810) (-1496.186) [-1473.365] (-1493.442) -- 0:11:59
12000 -- (-1486.642) [-1478.649] (-1483.746) (-1511.702) * [-1480.082] (-1481.670) (-1490.481) (-1497.659) -- 0:10:58
13000 -- (-1482.738) [-1485.107] (-1484.156) (-1517.938) * (-1475.805) [-1483.214] (-1485.255) (-1496.249) -- 0:11:23
14000 -- [-1477.979] (-1474.870) (-1483.168) (-1541.893) * (-1480.406) (-1477.954) (-1568.108) [-1480.319] -- 0:11:44
15000 -- [-1481.618] (-1489.722) (-1488.971) (-1520.430) * [-1477.138] (-1493.899) (-1565.058) (-1480.045) -- 0:10:56
Average standard deviation of split frequencies: 0.069823
16000 -- (-1484.460) (-1499.575) [-1480.134] (-1505.613) * [-1481.698] (-1495.766) (-1569.290) (-1477.460) -- 0:11:16
17000 -- (-1489.071) (-1500.096) [-1483.445] (-1501.722) * [-1471.964] (-1488.817) (-1550.574) (-1480.474) -- 0:11:33
18000 -- [-1484.689] (-1514.634) (-1483.436) (-1497.199) * [-1483.344] (-1481.725) (-1542.751) (-1482.425) -- 0:11:49
19000 -- [-1498.074] (-1489.340) (-1474.709) (-1509.463) * [-1481.366] (-1487.525) (-1551.018) (-1483.460) -- 0:12:02
20000 -- (-1484.237) (-1502.701) [-1479.142] (-1538.294) * (-1488.164) [-1483.784] (-1562.470) (-1485.879) -- 0:11:26
Average standard deviation of split frequencies: 0.057605
21000 -- [-1486.445] (-1512.133) (-1489.084) (-1488.525) * (-1497.850) [-1488.826] (-1559.205) (-1483.080) -- 0:11:39
22000 -- (-1498.058) (-1477.195) [-1490.339] (-1488.488) * (-1489.694) (-1488.638) (-1563.550) [-1481.523] -- 0:11:51
23000 -- (-1525.574) (-1490.730) (-1479.015) [-1482.924] * (-1491.864) [-1485.325] (-1556.413) (-1481.712) -- 0:11:19
24000 -- (-1503.042) (-1486.477) (-1492.667) [-1485.447] * (-1495.691) (-1481.746) (-1539.952) [-1485.694] -- 0:11:31
25000 -- (-1519.116) (-1495.131) (-1484.219) [-1481.401] * (-1499.855) [-1490.600] (-1557.837) (-1476.909) -- 0:11:42
Average standard deviation of split frequencies: 0.054659
26000 -- (-1565.082) (-1494.274) (-1493.176) [-1472.761] * (-1495.674) [-1483.258] (-1543.289) (-1487.496) -- 0:11:51
27000 -- (-1535.812) [-1481.239] (-1488.021) (-1487.228) * (-1497.425) [-1482.987] (-1543.750) (-1489.006) -- 0:11:24
28000 -- (-1546.486) (-1485.975) [-1499.061] (-1483.565) * (-1502.567) (-1481.315) (-1550.170) [-1477.911] -- 0:11:34
29000 -- (-1544.855) [-1486.977] (-1488.079) (-1485.962) * (-1505.501) [-1479.270] (-1557.334) (-1481.428) -- 0:11:43
30000 -- (-1538.154) [-1492.949] (-1491.787) (-1484.281) * (-1533.083) [-1477.958] (-1554.177) (-1486.176) -- 0:11:51
Average standard deviation of split frequencies: 0.047140
31000 -- (-1554.435) (-1508.206) (-1489.260) [-1474.029] * (-1498.726) [-1479.528] (-1562.984) (-1497.849) -- 0:11:27
32000 -- (-1552.137) (-1493.528) (-1496.306) [-1472.213] * (-1495.063) [-1482.125] (-1579.154) (-1491.759) -- 0:11:35
33000 -- (-1543.973) (-1494.294) (-1506.442) [-1478.741] * (-1489.134) (-1484.505) (-1582.120) [-1474.770] -- 0:11:43
34000 -- (-1544.576) (-1480.902) (-1506.614) [-1476.013] * (-1497.180) [-1483.776] (-1567.758) (-1489.438) -- 0:11:50
35000 -- (-1539.021) [-1473.896] (-1482.426) (-1487.176) * (-1488.490) [-1477.348] (-1557.760) (-1483.623) -- 0:11:29
Average standard deviation of split frequencies: 0.050508
36000 -- (-1537.378) (-1483.526) (-1494.601) [-1489.615] * (-1504.466) (-1489.461) (-1556.137) [-1476.656] -- 0:11:36
37000 -- (-1521.902) (-1479.579) (-1493.120) [-1480.206] * (-1495.599) (-1487.814) (-1559.383) [-1490.913] -- 0:11:42
38000 -- (-1527.708) [-1476.191] (-1494.862) (-1486.437) * (-1486.185) (-1483.378) (-1556.867) [-1488.488] -- 0:11:48
39000 -- (-1543.441) [-1484.245] (-1490.215) (-1486.584) * (-1481.760) (-1489.219) (-1546.810) [-1490.877] -- 0:11:29
40000 -- (-1539.367) [-1474.756] (-1493.442) (-1510.535) * (-1484.907) (-1482.902) (-1559.605) [-1481.653] -- 0:11:36
Average standard deviation of split frequencies: 0.047847
41000 -- (-1531.023) (-1475.814) [-1470.956] (-1469.274) * (-1491.536) [-1471.931] (-1554.015) (-1492.741) -- 0:11:18
42000 -- (-1538.468) (-1485.023) (-1491.227) [-1474.945] * (-1486.598) (-1483.843) (-1555.698) [-1482.025] -- 0:11:24
43000 -- (-1549.737) [-1481.863] (-1481.396) (-1485.043) * (-1499.515) (-1482.554) (-1566.466) [-1475.858] -- 0:11:07
44000 -- (-1538.507) (-1499.458) (-1508.177) [-1471.742] * (-1492.063) [-1478.922] (-1557.299) (-1484.542) -- 0:11:13
45000 -- (-1549.322) (-1483.635) (-1511.727) [-1479.817] * (-1493.197) (-1482.509) (-1553.511) [-1476.376] -- 0:10:57
Average standard deviation of split frequencies: 0.044292
46000 -- (-1549.820) [-1481.707] (-1498.218) (-1485.916) * (-1492.799) (-1485.692) (-1566.545) [-1473.857] -- 0:11:03
47000 -- (-1545.336) [-1487.229] (-1489.806) (-1474.863) * (-1501.318) (-1487.246) (-1553.842) [-1481.292] -- 0:10:48
48000 -- (-1537.762) [-1484.726] (-1485.378) (-1479.008) * (-1493.535) (-1483.102) (-1565.069) [-1481.260] -- 0:10:54
49000 -- (-1550.221) [-1480.578] (-1488.880) (-1479.536) * (-1495.928) [-1484.906] (-1553.137) (-1485.047) -- 0:10:59
50000 -- (-1548.495) [-1483.928] (-1483.838) (-1477.867) * (-1482.275) (-1482.718) (-1550.155) [-1487.343] -- 0:10:46
Average standard deviation of split frequencies: 0.040258
51000 -- (-1537.472) (-1480.563) (-1494.314) [-1494.256] * (-1478.826) [-1480.868] (-1570.248) (-1491.155) -- 0:10:51
52000 -- (-1544.225) [-1488.891] (-1489.700) (-1480.534) * (-1479.781) [-1475.154] (-1565.807) (-1488.474) -- 0:10:56
53000 -- (-1552.882) [-1472.767] (-1476.316) (-1495.399) * [-1483.104] (-1483.113) (-1556.285) (-1488.053) -- 0:10:43
54000 -- (-1545.225) (-1478.263) [-1487.888] (-1492.569) * (-1494.546) [-1474.415] (-1566.100) (-1487.078) -- 0:10:48
55000 -- (-1548.795) [-1476.198] (-1499.957) (-1490.079) * (-1492.564) [-1480.495] (-1548.007) (-1480.984) -- 0:10:52
Average standard deviation of split frequencies: 0.037233
56000 -- (-1543.300) (-1489.098) [-1480.235] (-1491.585) * (-1491.560) [-1482.125] (-1567.800) (-1489.750) -- 0:10:57
57000 -- (-1536.830) [-1479.472] (-1486.206) (-1471.860) * (-1495.675) [-1480.949] (-1560.369) (-1495.334) -- 0:10:45
58000 -- (-1540.353) (-1487.834) (-1486.400) [-1484.675] * [-1480.227] (-1488.885) (-1545.227) (-1492.230) -- 0:10:49
59000 -- (-1540.637) (-1484.439) [-1475.193] (-1477.898) * [-1477.463] (-1493.420) (-1553.167) (-1485.510) -- 0:10:53
60000 -- (-1535.701) (-1485.388) [-1476.706] (-1485.552) * [-1485.891] (-1483.819) (-1555.474) (-1500.714) -- 0:10:58
Average standard deviation of split frequencies: 0.036503
61000 -- (-1539.108) (-1491.467) [-1476.217] (-1478.593) * (-1491.843) [-1477.903] (-1567.961) (-1505.623) -- 0:10:46
62000 -- (-1534.740) (-1475.594) [-1471.222] (-1491.916) * (-1484.006) (-1488.925) (-1562.851) [-1494.365] -- 0:10:50
63000 -- (-1538.759) [-1483.680] (-1479.802) (-1501.536) * [-1492.596] (-1478.160) (-1553.098) (-1493.872) -- 0:10:54
64000 -- (-1549.709) (-1504.699) [-1492.025] (-1489.669) * (-1482.122) [-1479.154] (-1560.890) (-1490.184) -- 0:10:43
65000 -- (-1537.779) (-1496.740) (-1476.876) [-1478.940] * (-1474.133) [-1478.650] (-1564.994) (-1491.038) -- 0:10:47
Average standard deviation of split frequencies: 0.034339
66000 -- (-1557.888) (-1492.911) (-1480.152) [-1487.902] * [-1479.591] (-1487.400) (-1564.178) (-1497.977) -- 0:10:50
67000 -- (-1551.438) (-1499.350) [-1472.696] (-1486.943) * (-1484.470) (-1501.361) (-1567.180) [-1475.627] -- 0:10:54
68000 -- (-1551.471) (-1494.738) [-1479.483] (-1481.962) * (-1490.133) [-1488.791] (-1568.519) (-1490.225) -- 0:10:44
69000 -- (-1551.045) [-1489.312] (-1480.029) (-1485.183) * (-1487.452) [-1480.955] (-1564.073) (-1498.980) -- 0:10:47
70000 -- (-1551.080) (-1498.506) (-1488.578) [-1473.118] * (-1502.211) [-1477.251] (-1559.247) (-1489.506) -- 0:10:51
Average standard deviation of split frequencies: 0.032644
71000 -- (-1542.222) [-1497.382] (-1481.366) (-1484.153) * (-1486.447) [-1478.748] (-1545.465) (-1504.070) -- 0:10:54
72000 -- (-1542.593) (-1496.878) (-1496.977) [-1489.544] * [-1490.667] (-1481.039) (-1557.158) (-1506.203) -- 0:10:44
73000 -- (-1541.066) (-1496.965) (-1482.571) [-1487.980] * (-1489.891) [-1489.138] (-1559.653) (-1486.615) -- 0:10:47
74000 -- (-1543.288) (-1487.536) [-1480.652] (-1484.097) * (-1494.960) (-1474.421) (-1552.704) [-1485.350] -- 0:10:50
75000 -- (-1530.903) (-1493.514) [-1473.978] (-1486.501) * (-1488.524) [-1478.437] (-1555.959) (-1490.329) -- 0:10:53
Average standard deviation of split frequencies: 0.028317
76000 -- (-1529.840) (-1485.975) (-1478.190) [-1474.772] * (-1498.721) (-1494.100) (-1548.384) [-1479.571] -- 0:10:44
77000 -- (-1536.740) (-1499.942) (-1479.614) [-1477.152] * (-1485.510) (-1504.425) (-1567.221) [-1493.137] -- 0:10:47
78000 -- (-1539.111) (-1488.837) [-1491.083] (-1484.519) * [-1484.010] (-1501.514) (-1551.404) (-1494.948) -- 0:10:50
79000 -- (-1532.598) (-1491.647) [-1480.190] (-1478.711) * [-1473.627] (-1509.836) (-1551.754) (-1489.220) -- 0:10:41
80000 -- (-1545.496) (-1496.030) (-1500.047) [-1482.966] * (-1481.412) (-1505.665) (-1550.597) [-1478.893] -- 0:10:44
Average standard deviation of split frequencies: 0.027132
81000 -- (-1549.425) (-1492.997) [-1482.172] (-1489.025) * (-1487.529) (-1502.012) (-1558.899) [-1479.989] -- 0:10:46
82000 -- (-1537.633) (-1484.692) [-1480.683] (-1490.809) * [-1481.951] (-1494.950) (-1557.984) (-1487.678) -- 0:10:49
83000 -- (-1537.655) [-1490.088] (-1476.958) (-1482.130) * [-1475.394] (-1494.993) (-1558.762) (-1490.759) -- 0:10:40
84000 -- (-1545.921) [-1488.858] (-1483.201) (-1482.299) * [-1472.515] (-1491.268) (-1560.210) (-1494.023) -- 0:10:43
85000 -- (-1528.324) [-1475.746] (-1501.623) (-1484.082) * (-1474.227) [-1486.509] (-1551.670) (-1490.954) -- 0:10:45
Average standard deviation of split frequencies: 0.022760
86000 -- (-1546.530) [-1473.831] (-1508.412) (-1496.963) * [-1483.955] (-1492.333) (-1574.068) (-1505.943) -- 0:10:48
87000 -- (-1540.710) (-1486.064) (-1500.290) [-1481.121] * (-1490.974) [-1483.177] (-1552.632) (-1509.939) -- 0:10:40
88000 -- (-1546.027) [-1485.892] (-1491.032) (-1483.549) * [-1492.407] (-1483.233) (-1551.216) (-1495.009) -- 0:10:42
89000 -- (-1548.223) [-1484.297] (-1483.193) (-1487.749) * (-1477.446) [-1477.007] (-1555.673) (-1485.799) -- 0:10:44
90000 -- (-1541.657) [-1484.211] (-1476.686) (-1504.223) * (-1484.835) [-1475.681] (-1546.636) (-1493.214) -- 0:10:47
Average standard deviation of split frequencies: 0.024460
91000 -- (-1546.994) [-1481.071] (-1486.506) (-1497.952) * (-1487.794) (-1486.556) (-1575.225) [-1474.315] -- 0:10:39
92000 -- (-1553.635) (-1490.042) [-1493.999] (-1504.162) * (-1476.148) (-1487.009) (-1567.631) [-1479.816] -- 0:10:41
93000 -- (-1544.544) (-1481.464) [-1483.421] (-1505.853) * (-1488.710) [-1483.235] (-1559.316) (-1479.855) -- 0:10:43
94000 -- (-1537.694) (-1486.545) [-1490.018] (-1499.948) * [-1493.631] (-1489.440) (-1551.323) (-1490.524) -- 0:10:45
95000 -- (-1546.755) [-1483.536] (-1491.496) (-1513.094) * (-1481.595) [-1477.698] (-1561.245) (-1485.808) -- 0:10:38
Average standard deviation of split frequencies: 0.026891
96000 -- (-1542.631) [-1477.389] (-1483.046) (-1488.826) * (-1482.931) [-1484.675] (-1560.519) (-1494.413) -- 0:10:40
97000 -- (-1551.259) [-1485.013] (-1504.289) (-1487.607) * (-1497.692) [-1484.793] (-1554.126) (-1492.484) -- 0:10:42
98000 -- (-1537.911) (-1496.144) (-1485.207) [-1491.133] * (-1477.723) (-1497.411) (-1576.418) [-1478.692] -- 0:10:44
99000 -- (-1531.888) [-1485.431] (-1484.436) (-1487.543) * [-1475.241] (-1489.822) (-1559.962) (-1481.068) -- 0:10:37
100000 -- (-1547.637) (-1493.122) (-1489.267) [-1489.489] * (-1478.735) [-1479.756] (-1552.128) (-1480.020) -- 0:10:39
Average standard deviation of split frequencies: 0.026202
101000 -- (-1543.633) (-1482.723) [-1480.949] (-1484.375) * [-1477.904] (-1487.349) (-1562.342) (-1485.529) -- 0:10:40
102000 -- (-1544.301) (-1486.679) [-1480.358] (-1485.788) * [-1483.852] (-1486.432) (-1555.350) (-1485.989) -- 0:10:33
103000 -- (-1555.964) (-1481.998) [-1479.454] (-1498.751) * (-1487.867) (-1480.583) (-1555.644) [-1481.301] -- 0:10:35
104000 -- (-1534.114) (-1480.513) [-1480.938] (-1485.559) * (-1496.361) (-1479.284) (-1553.952) [-1479.273] -- 0:10:37
105000 -- (-1552.270) [-1479.177] (-1496.448) (-1485.545) * (-1495.734) (-1490.756) (-1561.390) [-1484.066] -- 0:10:39
Average standard deviation of split frequencies: 0.023045
106000 -- (-1531.768) (-1485.306) (-1485.347) [-1474.835] * (-1488.517) [-1487.654] (-1552.919) (-1479.179) -- 0:10:32
107000 -- (-1538.260) [-1479.634] (-1481.233) (-1489.466) * (-1492.695) (-1496.014) (-1553.836) [-1480.274] -- 0:10:34
108000 -- (-1547.848) (-1493.572) [-1470.076] (-1484.426) * (-1484.092) [-1485.733] (-1560.466) (-1483.781) -- 0:10:27
109000 -- (-1538.439) (-1500.998) (-1481.852) [-1476.730] * (-1490.706) (-1482.852) (-1557.190) [-1481.678] -- 0:10:29
110000 -- (-1547.113) [-1479.257] (-1482.264) (-1491.223) * (-1489.003) (-1477.371) (-1560.859) [-1477.440] -- 0:10:23
Average standard deviation of split frequencies: 0.024369
111000 -- (-1549.173) (-1490.258) (-1489.500) [-1483.240] * (-1488.573) (-1486.017) (-1560.203) [-1476.916] -- 0:10:24
112000 -- (-1542.982) (-1475.812) (-1484.599) [-1485.897] * (-1484.525) [-1477.399] (-1564.631) (-1482.572) -- 0:10:18
113000 -- (-1537.309) [-1486.442] (-1485.692) (-1497.067) * (-1497.808) [-1477.711] (-1566.155) (-1479.366) -- 0:10:20
114000 -- (-1551.586) [-1480.452] (-1490.594) (-1487.895) * (-1500.962) [-1472.657] (-1564.380) (-1480.375) -- 0:10:13
115000 -- (-1543.370) (-1483.183) (-1485.405) [-1485.733] * (-1497.469) (-1489.024) (-1568.298) [-1485.018] -- 0:10:15
Average standard deviation of split frequencies: 0.024752
116000 -- (-1546.346) (-1475.300) [-1486.122] (-1482.595) * (-1494.186) (-1487.433) (-1559.858) [-1472.915] -- 0:10:09
117000 -- (-1545.177) [-1484.100] (-1480.479) (-1489.068) * (-1498.492) [-1479.893] (-1549.354) (-1486.682) -- 0:10:11
118000 -- (-1531.120) [-1474.562] (-1474.294) (-1474.827) * [-1503.027] (-1497.604) (-1551.574) (-1477.506) -- 0:10:05
119000 -- (-1540.245) [-1479.433] (-1481.046) (-1482.968) * (-1495.154) (-1492.482) (-1577.025) [-1482.037] -- 0:10:07
120000 -- (-1554.420) (-1484.909) [-1480.595] (-1486.680) * (-1492.713) (-1500.087) (-1570.957) [-1476.513] -- 0:10:08
Average standard deviation of split frequencies: 0.025530
121000 -- (-1538.633) (-1503.439) (-1488.782) [-1481.251] * (-1493.483) (-1493.128) (-1559.290) [-1488.433] -- 0:10:02
122000 -- (-1531.504) (-1493.842) [-1486.479] (-1482.822) * (-1490.023) [-1482.327] (-1542.016) (-1500.680) -- 0:10:04
123000 -- (-1541.899) (-1496.390) [-1476.624] (-1494.171) * (-1495.802) [-1476.351] (-1546.579) (-1482.754) -- 0:10:06
124000 -- (-1540.377) (-1486.567) [-1474.675] (-1489.932) * (-1498.573) (-1485.564) (-1565.131) [-1476.211] -- 0:10:07
125000 -- (-1555.430) (-1487.607) [-1481.402] (-1490.006) * (-1487.181) (-1495.898) (-1563.391) [-1480.043] -- 0:10:02
Average standard deviation of split frequencies: 0.024942
126000 -- (-1543.991) (-1488.739) (-1472.603) [-1482.068] * (-1494.668) [-1476.917] (-1558.100) (-1477.302) -- 0:10:03
127000 -- (-1542.528) (-1487.688) [-1483.256] (-1492.734) * (-1479.027) (-1477.623) (-1562.608) [-1486.211] -- 0:10:04
128000 -- (-1554.439) (-1480.834) [-1480.351] (-1478.665) * [-1483.111] (-1482.025) (-1565.927) (-1500.697) -- 0:09:59
129000 -- (-1538.938) (-1478.547) [-1481.758] (-1493.140) * [-1481.346] (-1479.148) (-1556.470) (-1493.207) -- 0:10:00
130000 -- (-1532.572) [-1474.045] (-1488.151) (-1486.280) * (-1502.418) (-1481.664) (-1550.510) [-1485.173] -- 0:10:02
Average standard deviation of split frequencies: 0.022849
131000 -- (-1538.906) (-1486.092) [-1470.745] (-1487.911) * (-1485.707) (-1488.991) (-1552.861) [-1477.816] -- 0:10:03
132000 -- (-1543.411) [-1486.236] (-1481.176) (-1493.643) * (-1494.452) [-1483.180] (-1566.140) (-1477.432) -- 0:09:58
133000 -- (-1550.370) (-1479.251) (-1486.467) [-1487.049] * (-1487.294) (-1502.487) (-1558.937) [-1478.551] -- 0:09:59
134000 -- (-1557.994) (-1502.417) (-1486.325) [-1480.758] * (-1494.577) [-1486.138] (-1561.193) (-1479.049) -- 0:10:01
135000 -- (-1540.151) (-1490.905) (-1492.421) [-1481.744] * (-1487.125) (-1492.557) (-1568.128) [-1477.803] -- 0:09:55
Average standard deviation of split frequencies: 0.020797
136000 -- (-1531.743) (-1506.387) [-1484.336] (-1481.877) * (-1485.533) (-1504.710) (-1556.121) [-1479.163] -- 0:09:57
137000 -- (-1544.333) (-1497.753) (-1488.037) [-1470.445] * (-1479.257) (-1491.252) (-1559.483) [-1479.272] -- 0:09:52
138000 -- (-1551.483) (-1494.200) (-1484.692) [-1479.514] * [-1478.839] (-1493.538) (-1548.625) (-1480.800) -- 0:09:53
139000 -- (-1547.307) [-1480.643] (-1489.050) (-1477.581) * (-1488.027) (-1487.289) (-1549.327) [-1478.408] -- 0:09:54
140000 -- (-1547.890) (-1499.818) (-1489.316) [-1474.462] * (-1492.379) (-1487.817) (-1559.153) [-1482.795] -- 0:09:49
Average standard deviation of split frequencies: 0.020985
141000 -- (-1538.142) (-1506.752) [-1483.122] (-1489.797) * [-1480.927] (-1479.976) (-1567.457) (-1495.357) -- 0:09:50
142000 -- (-1547.809) [-1479.547] (-1489.447) (-1481.989) * (-1479.479) [-1485.155] (-1559.814) (-1479.558) -- 0:09:52
143000 -- (-1531.791) (-1494.414) [-1477.841] (-1480.784) * (-1474.752) (-1488.765) (-1554.266) [-1476.758] -- 0:09:47
144000 -- (-1548.727) (-1483.164) [-1474.005] (-1482.905) * [-1483.579] (-1485.429) (-1551.259) (-1488.243) -- 0:09:48
145000 -- (-1543.042) (-1484.839) [-1476.234] (-1474.824) * (-1482.468) [-1488.261] (-1559.686) (-1488.160) -- 0:09:49
Average standard deviation of split frequencies: 0.020950
146000 -- (-1542.405) (-1475.399) [-1485.893] (-1494.735) * (-1499.524) (-1503.448) (-1561.317) [-1479.617] -- 0:09:44
147000 -- (-1538.351) [-1484.155] (-1488.977) (-1476.877) * (-1496.994) [-1483.899] (-1554.852) (-1471.112) -- 0:09:46
148000 -- (-1533.959) (-1514.775) [-1484.341] (-1479.538) * (-1499.199) [-1487.257] (-1554.149) (-1478.786) -- 0:09:47
149000 -- (-1550.014) (-1485.839) (-1485.500) [-1479.532] * (-1490.235) (-1479.823) (-1564.719) [-1478.816] -- 0:09:48
150000 -- (-1539.515) (-1478.455) (-1495.451) [-1480.854] * (-1500.866) (-1488.646) (-1542.378) [-1485.168] -- 0:09:43
Average standard deviation of split frequencies: 0.019271
151000 -- (-1551.802) [-1478.710] (-1496.037) (-1493.668) * (-1504.362) [-1485.167] (-1552.235) (-1483.988) -- 0:09:44
152000 -- (-1540.793) [-1478.423] (-1490.773) (-1493.697) * (-1494.794) (-1489.928) (-1548.338) [-1476.753] -- 0:09:45
153000 -- (-1541.242) (-1480.520) [-1484.575] (-1490.768) * [-1482.880] (-1490.247) (-1547.248) (-1505.243) -- 0:09:46
154000 -- (-1539.133) (-1484.264) [-1480.825] (-1488.529) * (-1482.594) (-1482.558) (-1559.440) [-1479.326] -- 0:09:42
155000 -- (-1552.284) (-1495.728) [-1481.074] (-1484.831) * (-1504.614) [-1483.707] (-1576.698) (-1477.718) -- 0:09:43
Average standard deviation of split frequencies: 0.019298
156000 -- (-1538.304) (-1489.263) [-1475.784] (-1493.193) * [-1480.609] (-1485.737) (-1551.188) (-1492.134) -- 0:09:44
157000 -- (-1560.829) (-1502.247) (-1486.716) [-1475.444] * (-1503.807) [-1484.426] (-1557.184) (-1479.469) -- 0:09:45
158000 -- (-1548.485) (-1492.946) (-1491.580) [-1477.916] * (-1492.127) [-1476.203] (-1565.979) (-1475.294) -- 0:09:40
159000 -- (-1538.348) (-1498.058) (-1488.014) [-1472.416] * (-1490.949) [-1483.752] (-1556.561) (-1481.765) -- 0:09:41
160000 -- (-1549.528) (-1489.650) [-1488.229] (-1474.577) * (-1508.702) (-1493.089) (-1544.452) [-1483.714] -- 0:09:42
Average standard deviation of split frequencies: 0.018938
161000 -- (-1564.931) (-1492.224) [-1478.162] (-1475.667) * (-1500.882) (-1484.668) (-1555.859) [-1477.836] -- 0:09:43
162000 -- (-1553.499) (-1492.457) (-1486.332) [-1486.726] * (-1496.063) (-1486.387) (-1574.594) [-1488.866] -- 0:09:39
163000 -- (-1546.435) (-1508.486) (-1482.878) [-1476.658] * (-1508.364) [-1480.358] (-1564.067) (-1494.030) -- 0:09:40
164000 -- (-1538.297) (-1505.060) [-1487.040] (-1490.327) * (-1502.012) (-1481.011) (-1557.634) [-1498.066] -- 0:09:41
165000 -- (-1543.345) (-1498.001) [-1476.004] (-1482.960) * (-1515.239) (-1480.741) (-1557.758) [-1476.171] -- 0:09:41
Average standard deviation of split frequencies: 0.018553
166000 -- (-1554.180) (-1501.667) [-1488.787] (-1492.362) * (-1506.981) (-1476.529) (-1572.970) [-1477.390] -- 0:09:37
167000 -- (-1554.943) (-1513.406) [-1476.020] (-1491.819) * (-1518.046) [-1474.737] (-1565.799) (-1487.931) -- 0:09:38
168000 -- (-1539.983) (-1481.958) [-1472.839] (-1489.106) * (-1496.894) [-1473.613] (-1554.349) (-1491.495) -- 0:09:39
169000 -- (-1555.494) [-1483.598] (-1481.270) (-1491.095) * [-1480.160] (-1488.028) (-1556.346) (-1502.360) -- 0:09:40
170000 -- (-1550.477) [-1492.510] (-1491.788) (-1483.065) * (-1507.790) (-1480.688) (-1556.822) [-1479.923] -- 0:09:36
Average standard deviation of split frequencies: 0.017187
171000 -- (-1548.470) (-1496.000) (-1494.647) [-1486.838] * (-1483.547) [-1477.883] (-1551.249) (-1493.493) -- 0:09:36
172000 -- (-1547.713) (-1493.801) (-1495.631) [-1483.858] * (-1481.668) [-1472.123] (-1559.478) (-1491.822) -- 0:09:37
173000 -- (-1550.027) [-1480.263] (-1478.652) (-1481.176) * (-1493.409) [-1479.845] (-1548.296) (-1484.849) -- 0:09:38
174000 -- (-1537.456) [-1483.685] (-1484.556) (-1480.765) * (-1508.180) (-1485.661) (-1558.486) [-1477.678] -- 0:09:34
175000 -- (-1548.305) [-1477.489] (-1481.368) (-1492.930) * [-1494.539] (-1486.398) (-1561.595) (-1486.590) -- 0:09:35
Average standard deviation of split frequencies: 0.017379
176000 -- (-1538.366) (-1476.133) [-1479.986] (-1502.748) * (-1502.489) (-1483.404) (-1558.431) [-1477.087] -- 0:09:35
177000 -- (-1550.463) [-1478.872] (-1478.770) (-1497.325) * (-1495.060) (-1488.517) (-1564.881) [-1477.839] -- 0:09:36
178000 -- (-1546.364) (-1507.181) [-1481.509] (-1487.115) * (-1488.676) [-1480.481] (-1551.545) (-1488.956) -- 0:09:32
179000 -- (-1547.621) [-1481.520] (-1477.376) (-1496.008) * [-1488.913] (-1477.750) (-1558.849) (-1517.390) -- 0:09:33
180000 -- (-1558.828) [-1482.360] (-1495.634) (-1504.249) * (-1483.289) [-1472.757] (-1562.866) (-1514.957) -- 0:09:34
Average standard deviation of split frequencies: 0.017840
181000 -- (-1529.722) (-1481.923) [-1479.098] (-1502.605) * (-1483.101) [-1471.323] (-1556.652) (-1497.132) -- 0:09:30
182000 -- (-1541.824) (-1484.320) (-1481.914) [-1496.468] * (-1481.030) [-1475.080] (-1554.957) (-1491.558) -- 0:09:30
183000 -- (-1549.856) (-1485.848) [-1483.670] (-1486.461) * [-1492.275] (-1476.333) (-1551.198) (-1498.261) -- 0:09:26
184000 -- (-1544.780) (-1496.967) [-1478.055] (-1481.885) * (-1486.616) [-1472.457] (-1543.765) (-1503.964) -- 0:09:27
185000 -- (-1539.401) (-1499.434) [-1474.427] (-1483.981) * (-1486.834) [-1484.142] (-1558.583) (-1514.887) -- 0:09:23
Average standard deviation of split frequencies: 0.017034
186000 -- (-1541.201) (-1499.301) [-1472.327] (-1485.514) * (-1487.720) [-1484.883] (-1552.590) (-1490.569) -- 0:09:24
187000 -- (-1544.201) (-1486.314) [-1478.746] (-1503.456) * (-1497.333) [-1479.383] (-1545.462) (-1483.525) -- 0:09:20
188000 -- (-1541.235) (-1481.415) [-1480.739] (-1502.756) * (-1478.084) [-1482.342] (-1550.096) (-1494.750) -- 0:09:21
189000 -- (-1539.515) (-1495.374) [-1474.247] (-1493.204) * (-1492.431) (-1477.120) (-1547.934) [-1483.143] -- 0:09:17
190000 -- (-1529.730) (-1487.348) [-1471.846] (-1482.582) * (-1500.847) [-1487.148] (-1545.355) (-1500.325) -- 0:09:18
Average standard deviation of split frequencies: 0.017019
191000 -- (-1524.763) [-1486.892] (-1498.584) (-1489.560) * (-1494.606) [-1477.351] (-1557.655) (-1516.207) -- 0:09:14
192000 -- (-1539.610) (-1497.104) (-1493.015) [-1490.625] * (-1490.735) [-1482.705] (-1553.632) (-1491.264) -- 0:09:15
193000 -- (-1538.861) (-1493.503) (-1482.133) [-1488.096] * (-1491.943) [-1475.329] (-1552.562) (-1507.081) -- 0:09:11
194000 -- (-1535.013) (-1510.714) [-1492.601] (-1488.034) * (-1481.182) (-1481.559) (-1564.405) [-1501.630] -- 0:09:12
195000 -- (-1527.360) (-1499.554) [-1480.482] (-1482.342) * [-1491.645] (-1483.750) (-1567.567) (-1505.685) -- 0:09:09
Average standard deviation of split frequencies: 0.017656
196000 -- (-1537.621) (-1496.591) (-1486.518) [-1480.364] * [-1492.480] (-1481.932) (-1562.615) (-1501.582) -- 0:09:09
197000 -- (-1547.533) (-1496.723) [-1480.721] (-1479.108) * (-1487.806) [-1478.624] (-1552.146) (-1503.988) -- 0:09:06
198000 -- (-1542.707) (-1487.121) [-1477.460] (-1481.004) * [-1472.231] (-1484.337) (-1551.678) (-1494.091) -- 0:09:06
199000 -- (-1539.699) [-1472.937] (-1484.706) (-1486.341) * [-1478.576] (-1500.392) (-1560.525) (-1480.771) -- 0:09:03
200000 -- (-1546.546) (-1509.024) (-1478.102) [-1482.162] * (-1482.972) (-1504.899) (-1553.868) [-1489.572] -- 0:09:00
Average standard deviation of split frequencies: 0.017017
201000 -- (-1554.241) (-1492.435) (-1476.301) [-1487.696] * (-1487.009) (-1486.277) (-1561.840) [-1479.187] -- 0:09:00
202000 -- (-1547.998) [-1489.480] (-1473.423) (-1500.093) * [-1471.580] (-1492.060) (-1558.163) (-1493.823) -- 0:08:57
203000 -- (-1548.703) (-1479.687) [-1475.272] (-1489.947) * (-1481.802) (-1499.085) (-1566.040) [-1481.114] -- 0:08:57
204000 -- (-1532.521) [-1481.518] (-1499.925) (-1485.238) * (-1481.954) [-1477.054] (-1551.182) (-1487.386) -- 0:08:54
205000 -- (-1540.210) (-1480.112) (-1479.759) [-1484.404] * (-1484.634) [-1477.096] (-1563.568) (-1497.835) -- 0:08:55
Average standard deviation of split frequencies: 0.017138
206000 -- (-1541.284) [-1486.551] (-1480.966) (-1487.864) * (-1486.024) [-1481.956] (-1553.598) (-1498.883) -- 0:08:51
207000 -- (-1528.119) (-1485.703) [-1473.804] (-1496.779) * (-1493.359) [-1490.844] (-1559.290) (-1485.350) -- 0:08:52
208000 -- (-1546.416) (-1486.214) [-1483.519] (-1502.359) * (-1490.380) (-1480.659) (-1568.026) [-1480.470] -- 0:08:49
209000 -- (-1538.196) [-1479.040] (-1498.215) (-1488.944) * (-1489.146) [-1483.896] (-1560.816) (-1478.040) -- 0:08:49
210000 -- (-1546.922) (-1473.721) (-1496.215) [-1489.301] * (-1478.426) (-1484.752) (-1556.782) [-1482.666] -- 0:08:46
Average standard deviation of split frequencies: 0.016132
211000 -- (-1546.866) (-1490.631) (-1484.581) [-1495.310] * (-1478.566) (-1489.836) (-1557.051) [-1474.988] -- 0:08:47
212000 -- (-1556.808) [-1474.422] (-1479.075) (-1499.004) * [-1478.833] (-1491.144) (-1559.203) (-1481.932) -- 0:08:44
213000 -- (-1561.696) (-1482.901) [-1475.313] (-1496.718) * (-1479.278) (-1481.016) (-1545.719) [-1479.475] -- 0:08:44
214000 -- (-1544.544) [-1493.159] (-1472.448) (-1510.773) * (-1474.955) (-1502.642) (-1551.783) [-1476.033] -- 0:08:41
215000 -- (-1541.879) (-1487.122) [-1479.173] (-1489.193) * [-1475.697] (-1490.384) (-1537.115) (-1475.911) -- 0:08:42
Average standard deviation of split frequencies: 0.016004
216000 -- (-1547.756) (-1509.980) [-1479.843] (-1480.950) * [-1486.551] (-1486.119) (-1567.376) (-1478.319) -- 0:08:39
217000 -- (-1535.645) (-1493.724) [-1477.184] (-1490.675) * (-1499.252) (-1505.698) (-1550.561) [-1477.974] -- 0:08:39
218000 -- (-1541.620) [-1489.269] (-1483.036) (-1491.166) * (-1504.935) (-1496.522) (-1547.415) [-1487.538] -- 0:08:36
219000 -- (-1536.874) [-1484.034] (-1485.284) (-1489.221) * (-1506.477) (-1483.818) (-1547.323) [-1485.204] -- 0:08:37
220000 -- (-1548.316) [-1480.134] (-1489.369) (-1500.541) * (-1481.500) [-1477.680] (-1542.161) (-1487.379) -- 0:08:34
Average standard deviation of split frequencies: 0.017912
221000 -- (-1539.980) [-1486.022] (-1504.470) (-1519.006) * (-1481.441) (-1482.485) (-1548.447) [-1477.824] -- 0:08:34
222000 -- (-1539.656) [-1483.681] (-1496.897) (-1497.375) * (-1492.183) (-1480.286) (-1550.666) [-1492.224] -- 0:08:35
223000 -- (-1553.703) [-1491.559] (-1494.966) (-1494.734) * (-1489.678) (-1484.266) (-1565.920) [-1483.644] -- 0:08:32
224000 -- (-1544.223) [-1469.783] (-1492.246) (-1486.326) * (-1494.446) (-1488.167) (-1562.599) [-1473.626] -- 0:08:32
225000 -- (-1545.495) (-1477.187) (-1484.540) [-1480.808] * (-1491.160) [-1480.857] (-1544.185) (-1483.065) -- 0:08:33
Average standard deviation of split frequencies: 0.017035
226000 -- (-1533.887) (-1483.395) (-1481.988) [-1481.041] * (-1489.542) (-1494.677) (-1543.871) [-1479.431] -- 0:08:33
227000 -- (-1543.737) (-1480.959) [-1495.707] (-1491.439) * (-1491.550) (-1475.759) (-1543.430) [-1474.662] -- 0:08:34
228000 -- (-1544.928) (-1487.952) [-1473.792] (-1478.332) * (-1506.485) (-1484.273) (-1559.314) [-1473.000] -- 0:08:31
229000 -- (-1547.364) (-1488.061) [-1473.638] (-1502.746) * (-1506.037) [-1484.991] (-1578.006) (-1487.324) -- 0:08:31
230000 -- (-1550.002) [-1473.586] (-1469.205) (-1493.437) * [-1485.450] (-1480.548) (-1573.311) (-1483.379) -- 0:08:28
Average standard deviation of split frequencies: 0.018004
231000 -- (-1551.519) [-1473.904] (-1481.749) (-1494.224) * [-1473.086] (-1480.455) (-1542.481) (-1492.842) -- 0:08:29
232000 -- (-1550.654) (-1486.961) [-1478.015] (-1483.571) * (-1491.081) [-1473.168] (-1557.380) (-1483.583) -- 0:08:29
233000 -- (-1553.501) [-1489.724] (-1480.235) (-1484.390) * (-1492.508) [-1473.920] (-1559.500) (-1486.688) -- 0:08:26
234000 -- (-1546.238) [-1492.551] (-1485.182) (-1486.212) * (-1493.954) [-1479.849] (-1572.247) (-1488.085) -- 0:08:27
235000 -- (-1549.011) (-1508.736) [-1482.525] (-1477.088) * [-1470.525] (-1483.672) (-1552.141) (-1491.980) -- 0:08:24
Average standard deviation of split frequencies: 0.017216
236000 -- (-1539.135) (-1513.012) [-1479.705] (-1501.694) * (-1483.690) [-1475.980] (-1546.133) (-1484.571) -- 0:08:25
237000 -- (-1551.788) [-1496.582] (-1479.197) (-1508.337) * (-1478.614) (-1487.305) (-1556.559) [-1486.392] -- 0:08:22
238000 -- (-1547.023) (-1490.729) (-1485.904) [-1485.233] * (-1485.796) [-1479.613] (-1552.751) (-1501.658) -- 0:08:22
239000 -- (-1534.210) (-1485.948) [-1475.446] (-1517.548) * (-1482.658) [-1477.060] (-1545.508) (-1487.476) -- 0:08:19
240000 -- (-1538.838) (-1486.723) [-1479.661] (-1501.499) * (-1487.135) (-1496.769) (-1560.700) [-1487.052] -- 0:08:20
Average standard deviation of split frequencies: 0.016789
241000 -- (-1539.255) [-1475.281] (-1474.716) (-1489.073) * [-1480.014] (-1489.170) (-1555.515) (-1485.970) -- 0:08:17
242000 -- (-1554.802) (-1483.340) (-1484.170) [-1487.905] * (-1496.112) [-1476.303] (-1547.128) (-1479.714) -- 0:08:18
243000 -- (-1544.403) (-1474.488) (-1482.995) [-1477.345] * (-1487.114) (-1479.675) (-1542.087) [-1480.262] -- 0:08:15
244000 -- (-1544.491) (-1482.242) (-1490.482) [-1476.994] * (-1490.293) [-1485.450] (-1550.704) (-1485.056) -- 0:08:15
245000 -- (-1537.408) [-1473.083] (-1478.146) (-1482.864) * (-1485.085) [-1479.673] (-1555.473) (-1478.764) -- 0:08:13
Average standard deviation of split frequencies: 0.016444
246000 -- (-1543.901) (-1473.266) (-1486.843) [-1476.621] * (-1488.683) (-1489.960) (-1561.885) [-1469.020] -- 0:08:13
247000 -- (-1548.321) (-1485.643) (-1475.970) [-1473.525] * (-1489.945) [-1474.873] (-1549.699) (-1479.168) -- 0:08:10
248000 -- (-1556.781) (-1473.684) [-1478.243] (-1473.195) * (-1484.581) [-1476.821] (-1559.507) (-1493.788) -- 0:08:08
249000 -- (-1542.403) (-1476.452) (-1494.618) [-1474.443] * (-1492.108) (-1478.393) (-1542.341) [-1483.248] -- 0:08:08
250000 -- (-1546.093) [-1468.494] (-1492.415) (-1484.487) * [-1483.213] (-1481.914) (-1557.962) (-1476.168) -- 0:08:06
Average standard deviation of split frequencies: 0.015089
251000 -- (-1546.280) (-1481.371) [-1483.657] (-1496.273) * (-1478.792) (-1491.313) (-1569.494) [-1483.054] -- 0:08:06
252000 -- (-1549.048) [-1476.116] (-1486.686) (-1480.708) * (-1490.495) (-1483.361) (-1556.147) [-1484.184] -- 0:08:03
253000 -- (-1546.637) [-1474.367] (-1491.465) (-1477.150) * (-1480.175) (-1479.549) (-1554.200) [-1477.286] -- 0:08:04
254000 -- (-1545.730) [-1473.874] (-1487.074) (-1472.700) * [-1483.418] (-1475.263) (-1562.610) (-1486.542) -- 0:08:01
255000 -- (-1543.800) [-1489.917] (-1502.975) (-1488.989) * (-1481.491) (-1477.832) (-1563.325) [-1476.340] -- 0:08:02
Average standard deviation of split frequencies: 0.015345
256000 -- (-1542.687) (-1489.571) (-1488.609) [-1478.518] * (-1488.312) [-1474.492] (-1567.411) (-1484.500) -- 0:07:59
257000 -- (-1546.633) (-1502.592) (-1484.065) [-1482.276] * (-1477.303) [-1477.032] (-1557.834) (-1483.848) -- 0:07:59
258000 -- (-1549.513) [-1476.682] (-1487.204) (-1490.047) * (-1499.275) [-1489.144] (-1563.176) (-1487.846) -- 0:07:57
259000 -- (-1548.866) [-1480.009] (-1495.845) (-1485.219) * (-1490.324) [-1477.340] (-1558.994) (-1490.142) -- 0:07:57
260000 -- (-1559.203) [-1486.957] (-1480.410) (-1490.248) * (-1487.594) [-1480.512] (-1574.276) (-1487.116) -- 0:07:58
Average standard deviation of split frequencies: 0.015673
261000 -- (-1543.722) [-1485.135] (-1493.368) (-1483.033) * (-1481.720) (-1485.556) (-1543.889) [-1474.294] -- 0:07:58
262000 -- (-1533.539) [-1470.676] (-1505.228) (-1488.392) * (-1496.681) (-1478.870) (-1538.735) [-1471.410] -- 0:07:56
263000 -- (-1555.379) (-1477.804) (-1499.913) [-1479.756] * (-1499.823) (-1484.390) (-1552.015) [-1486.198] -- 0:07:56
264000 -- (-1562.242) [-1478.238] (-1509.116) (-1477.688) * (-1493.224) [-1486.796] (-1553.048) (-1490.957) -- 0:07:56
265000 -- (-1556.261) (-1482.924) (-1520.951) [-1472.970] * (-1540.283) [-1486.201] (-1574.200) (-1482.953) -- 0:07:57
Average standard deviation of split frequencies: 0.015496
266000 -- (-1548.268) (-1476.110) (-1491.424) [-1476.372] * (-1530.112) [-1487.360] (-1557.737) (-1484.167) -- 0:07:54
267000 -- (-1539.691) [-1480.446] (-1514.044) (-1484.049) * (-1543.340) [-1493.291] (-1558.826) (-1492.031) -- 0:07:54
268000 -- (-1540.546) (-1480.430) (-1507.657) [-1477.932] * (-1527.274) (-1484.703) (-1555.858) [-1479.156] -- 0:07:55
269000 -- (-1545.050) [-1480.128] (-1499.216) (-1488.501) * (-1538.767) (-1487.866) (-1566.969) [-1481.249] -- 0:07:52
270000 -- (-1547.587) [-1475.758] (-1490.636) (-1495.115) * (-1538.270) [-1494.590] (-1558.260) (-1478.111) -- 0:07:53
Average standard deviation of split frequencies: 0.015882
271000 -- (-1532.166) (-1496.186) [-1490.489] (-1493.709) * (-1545.887) [-1474.307] (-1559.688) (-1476.421) -- 0:07:53
272000 -- (-1536.066) (-1496.159) [-1485.917] (-1490.424) * (-1544.422) (-1478.799) (-1562.708) [-1474.990] -- 0:07:53
273000 -- (-1540.082) (-1504.266) (-1484.073) [-1482.673] * (-1535.198) [-1484.479] (-1560.650) (-1481.947) -- 0:07:51
274000 -- (-1541.627) [-1478.102] (-1480.898) (-1493.124) * (-1536.777) (-1482.363) (-1546.554) [-1488.529] -- 0:07:51
275000 -- (-1537.458) (-1499.472) (-1487.778) [-1495.830] * (-1536.378) [-1470.247] (-1543.715) (-1477.053) -- 0:07:51
Average standard deviation of split frequencies: 0.015372
276000 -- (-1545.053) (-1485.352) [-1485.670] (-1506.957) * (-1549.397) (-1473.770) (-1539.200) [-1479.029] -- 0:07:52
277000 -- (-1560.639) (-1495.455) (-1483.116) [-1489.632] * (-1536.792) (-1484.914) (-1557.059) [-1482.314] -- 0:07:49
278000 -- (-1547.229) [-1480.211] (-1486.190) (-1484.190) * (-1531.484) [-1483.587] (-1546.760) (-1493.259) -- 0:07:50
279000 -- (-1541.116) [-1485.749] (-1486.894) (-1479.542) * (-1537.710) [-1483.455] (-1542.432) (-1487.126) -- 0:07:50
280000 -- (-1547.996) (-1488.025) [-1482.847] (-1495.107) * (-1544.274) (-1483.970) (-1554.679) [-1477.758] -- 0:07:50
Average standard deviation of split frequencies: 0.014789
281000 -- (-1531.223) [-1483.975] (-1485.657) (-1494.440) * (-1546.274) [-1480.229] (-1547.097) (-1486.559) -- 0:07:48
282000 -- (-1550.884) (-1475.367) [-1483.638] (-1495.053) * (-1539.655) (-1489.589) (-1539.111) [-1489.066] -- 0:07:48
283000 -- (-1540.136) (-1485.528) [-1483.560] (-1496.507) * (-1542.136) (-1488.722) (-1557.114) [-1484.274] -- 0:07:48
284000 -- (-1556.101) (-1493.975) [-1478.251] (-1488.581) * (-1547.106) [-1477.534] (-1564.175) (-1498.153) -- 0:07:48
285000 -- (-1536.214) [-1485.207] (-1491.917) (-1487.788) * (-1551.170) (-1481.710) (-1559.318) [-1484.279] -- 0:07:46
Average standard deviation of split frequencies: 0.014085
286000 -- (-1538.268) [-1484.476] (-1496.617) (-1490.609) * (-1544.059) [-1483.867] (-1559.295) (-1479.636) -- 0:07:46
287000 -- (-1546.295) [-1475.307] (-1492.011) (-1498.432) * (-1528.159) [-1484.678] (-1567.621) (-1485.436) -- 0:07:47
288000 -- (-1541.192) [-1479.085] (-1507.633) (-1483.599) * (-1565.426) (-1491.875) (-1566.390) [-1477.976] -- 0:07:47
289000 -- (-1544.270) [-1474.302] (-1497.898) (-1484.892) * (-1533.232) [-1480.327] (-1569.462) (-1484.049) -- 0:07:47
290000 -- (-1536.894) [-1472.732] (-1490.361) (-1499.894) * (-1538.170) [-1474.712] (-1537.049) (-1478.669) -- 0:07:45
Average standard deviation of split frequencies: 0.012342
291000 -- (-1537.627) (-1480.328) [-1478.375] (-1491.982) * (-1536.093) [-1478.344] (-1548.188) (-1486.464) -- 0:07:45
292000 -- (-1544.297) (-1482.653) [-1480.819] (-1488.464) * (-1531.169) [-1479.865] (-1573.280) (-1485.891) -- 0:07:45
293000 -- (-1557.981) (-1485.248) [-1484.180] (-1494.538) * (-1554.717) [-1490.671] (-1556.774) (-1488.465) -- 0:07:45
294000 -- (-1579.789) [-1493.093] (-1483.464) (-1476.958) * (-1537.908) (-1485.684) (-1547.314) [-1484.442] -- 0:07:43
295000 -- (-1554.735) (-1482.944) [-1486.406] (-1491.949) * (-1545.059) (-1487.010) (-1551.538) [-1483.471] -- 0:07:43
Average standard deviation of split frequencies: 0.012663
296000 -- (-1542.903) (-1486.600) [-1478.010] (-1483.397) * (-1544.987) (-1486.774) (-1562.129) [-1483.051] -- 0:07:43
297000 -- (-1543.565) (-1482.629) [-1472.959] (-1480.875) * (-1533.680) [-1484.038] (-1568.438) (-1480.789) -- 0:07:43
298000 -- (-1536.548) (-1493.503) [-1483.816] (-1489.720) * (-1535.626) (-1480.905) (-1554.106) [-1474.766] -- 0:07:41
299000 -- (-1530.103) (-1484.354) [-1483.617] (-1495.855) * (-1534.425) [-1481.524] (-1556.927) (-1476.626) -- 0:07:41
300000 -- (-1542.100) (-1489.915) [-1472.929] (-1486.240) * (-1541.647) [-1481.003] (-1544.895) (-1491.384) -- 0:07:42
Average standard deviation of split frequencies: 0.012505
301000 -- (-1544.814) (-1482.146) (-1485.453) [-1478.551] * (-1537.152) [-1480.491] (-1565.192) (-1479.271) -- 0:07:42
302000 -- (-1542.137) (-1496.219) (-1485.631) [-1475.846] * (-1525.548) [-1480.858] (-1561.585) (-1478.565) -- 0:07:39
303000 -- (-1559.063) (-1484.991) [-1485.314] (-1477.775) * (-1542.409) [-1486.001] (-1550.736) (-1493.534) -- 0:07:40
304000 -- (-1553.883) (-1489.524) (-1487.203) [-1478.799] * (-1528.976) (-1487.868) (-1553.278) [-1482.757] -- 0:07:40
305000 -- (-1536.961) (-1510.055) (-1479.833) [-1477.494] * (-1534.098) (-1484.970) (-1568.453) [-1479.318] -- 0:07:38
Average standard deviation of split frequencies: 0.011811
306000 -- (-1535.481) (-1513.365) (-1482.631) [-1474.701] * (-1548.951) (-1492.737) (-1565.779) [-1485.380] -- 0:07:38
307000 -- (-1541.555) (-1496.912) [-1481.495] (-1473.540) * (-1538.503) [-1479.713] (-1567.524) (-1490.854) -- 0:07:38
308000 -- (-1523.026) (-1496.159) [-1493.700] (-1484.693) * (-1522.873) (-1480.195) (-1564.939) [-1485.007] -- 0:07:38
309000 -- (-1551.508) (-1499.182) [-1482.376] (-1478.344) * (-1542.606) (-1477.853) (-1549.498) [-1473.027] -- 0:07:36
310000 -- (-1540.597) (-1492.865) (-1485.743) [-1486.404] * (-1550.162) [-1469.498] (-1548.919) (-1476.907) -- 0:07:36
Average standard deviation of split frequencies: 0.011695
311000 -- (-1543.499) (-1485.392) (-1495.365) [-1489.397] * (-1530.652) (-1472.352) (-1560.766) [-1481.570] -- 0:07:36
312000 -- (-1544.041) (-1491.024) (-1502.604) [-1478.101] * (-1540.076) (-1476.054) (-1575.255) [-1490.895] -- 0:07:36
313000 -- (-1543.356) (-1481.404) (-1488.322) [-1484.888] * (-1533.311) [-1481.060] (-1556.892) (-1482.049) -- 0:07:34
314000 -- (-1540.038) (-1490.526) (-1496.751) [-1478.091] * (-1548.028) [-1483.639] (-1554.422) (-1487.398) -- 0:07:34
315000 -- (-1525.148) [-1482.649] (-1487.127) (-1480.651) * (-1549.793) [-1478.010] (-1564.877) (-1501.767) -- 0:07:34
Average standard deviation of split frequencies: 0.011322
316000 -- (-1539.290) (-1487.193) (-1484.769) [-1470.810] * (-1548.958) [-1478.523] (-1559.274) (-1482.678) -- 0:07:32
317000 -- (-1524.483) (-1495.423) (-1493.089) [-1478.370] * (-1541.638) [-1481.678] (-1556.953) (-1488.063) -- 0:07:32
318000 -- (-1536.082) (-1494.360) [-1484.754] (-1480.743) * (-1558.823) [-1480.886] (-1551.547) (-1478.965) -- 0:07:32
319000 -- (-1536.854) (-1491.638) (-1502.168) [-1473.473] * (-1556.582) [-1486.889] (-1566.243) (-1487.030) -- 0:07:32
320000 -- (-1547.314) [-1487.987] (-1484.537) (-1480.831) * (-1557.841) [-1477.231] (-1574.302) (-1482.319) -- 0:07:30
Average standard deviation of split frequencies: 0.011721
321000 -- (-1540.131) (-1489.499) [-1474.463] (-1494.601) * (-1545.502) (-1472.158) (-1567.727) [-1486.634] -- 0:07:30
322000 -- (-1544.102) (-1483.498) [-1471.468] (-1484.859) * (-1539.250) [-1471.174] (-1557.385) (-1491.505) -- 0:07:28
323000 -- (-1537.253) (-1499.155) [-1474.924] (-1491.109) * (-1537.109) [-1474.789] (-1546.635) (-1482.915) -- 0:07:28
324000 -- (-1544.574) (-1481.528) [-1472.599] (-1504.617) * (-1544.938) (-1484.446) (-1569.760) [-1477.164] -- 0:07:26
325000 -- (-1538.946) (-1487.624) [-1495.448] (-1486.199) * (-1529.503) [-1473.477] (-1573.805) (-1479.541) -- 0:07:26
Average standard deviation of split frequencies: 0.011785
326000 -- (-1544.601) (-1480.822) (-1489.952) [-1492.335] * (-1540.998) [-1472.445] (-1551.433) (-1481.677) -- 0:07:24
327000 -- (-1539.773) [-1478.101] (-1488.298) (-1491.412) * (-1537.944) (-1474.551) (-1555.848) [-1478.341] -- 0:07:24
328000 -- (-1532.133) (-1493.887) [-1480.037] (-1481.360) * (-1538.894) [-1473.657] (-1546.674) (-1483.719) -- 0:07:22
329000 -- (-1548.562) (-1476.723) (-1481.356) [-1482.058] * (-1544.384) (-1493.449) (-1557.813) [-1490.065] -- 0:07:22
330000 -- (-1538.238) (-1490.289) (-1490.267) [-1476.165] * (-1550.310) (-1473.632) (-1548.794) [-1487.069] -- 0:07:20
Average standard deviation of split frequencies: 0.012305
331000 -- (-1545.338) (-1489.800) (-1501.565) [-1480.659] * (-1549.631) [-1482.154] (-1557.727) (-1479.789) -- 0:07:20
332000 -- (-1551.965) [-1483.725] (-1504.691) (-1506.736) * (-1546.292) (-1494.368) (-1564.259) [-1481.961] -- 0:07:18
333000 -- (-1541.306) [-1481.318] (-1505.298) (-1507.713) * (-1541.317) (-1481.465) (-1554.112) [-1481.523] -- 0:07:18
334000 -- (-1555.719) [-1475.046] (-1517.420) (-1492.079) * (-1533.400) (-1480.521) (-1542.595) [-1475.863] -- 0:07:18
335000 -- (-1555.658) (-1488.625) [-1492.840] (-1491.353) * (-1536.855) (-1475.046) (-1566.495) [-1475.429] -- 0:07:18
Average standard deviation of split frequencies: 0.011906
336000 -- (-1555.086) (-1495.450) (-1490.979) [-1488.755] * (-1541.396) [-1480.948] (-1545.350) (-1485.004) -- 0:07:16
337000 -- (-1551.294) [-1485.356] (-1497.525) (-1494.102) * (-1561.866) (-1482.276) (-1567.072) [-1488.532] -- 0:07:16
338000 -- (-1527.147) (-1492.333) [-1492.032] (-1493.811) * (-1538.571) [-1474.518] (-1560.152) (-1485.293) -- 0:07:16
339000 -- (-1550.058) (-1492.244) (-1480.117) [-1479.315] * (-1529.067) (-1481.592) (-1562.684) [-1485.453] -- 0:07:16
340000 -- (-1532.910) (-1492.228) (-1476.398) [-1487.348] * (-1537.701) [-1483.758] (-1552.152) (-1494.657) -- 0:07:14
Average standard deviation of split frequencies: 0.012418
341000 -- (-1535.359) (-1485.316) [-1476.562] (-1490.266) * (-1536.202) (-1483.632) (-1564.924) [-1487.399] -- 0:07:14
342000 -- (-1540.431) (-1491.110) [-1480.015] (-1489.085) * (-1531.054) (-1483.474) (-1562.524) [-1481.254] -- 0:07:14
343000 -- (-1541.638) (-1504.351) [-1472.626] (-1497.411) * (-1543.746) (-1487.314) (-1556.815) [-1480.093] -- 0:07:14
344000 -- (-1531.423) (-1487.031) [-1478.866] (-1483.075) * (-1526.679) (-1489.228) (-1561.479) [-1484.487] -- 0:07:12
345000 -- (-1551.257) (-1475.233) [-1473.730] (-1499.364) * (-1519.547) [-1480.192] (-1560.116) (-1482.131) -- 0:07:12
Average standard deviation of split frequencies: 0.012330
346000 -- (-1532.209) [-1480.372] (-1490.001) (-1486.699) * (-1537.015) [-1476.195] (-1552.787) (-1478.317) -- 0:07:12
347000 -- (-1535.431) (-1483.165) (-1504.346) [-1483.457] * (-1529.932) (-1480.809) (-1559.624) [-1476.417] -- 0:07:12
348000 -- (-1529.403) (-1487.881) (-1494.757) [-1486.117] * (-1533.387) [-1476.808] (-1558.963) (-1484.226) -- 0:07:10
349000 -- (-1531.845) (-1486.649) (-1494.610) [-1491.982] * (-1537.128) (-1491.120) (-1561.457) [-1471.382] -- 0:07:10
350000 -- (-1532.023) (-1495.226) (-1483.207) [-1486.521] * (-1531.217) (-1484.603) (-1561.895) [-1488.323] -- 0:07:10
Average standard deviation of split frequencies: 0.012237
351000 -- (-1555.723) [-1483.721] (-1489.560) (-1486.961) * (-1535.112) [-1481.263] (-1558.633) (-1489.873) -- 0:07:08
352000 -- (-1547.395) [-1483.573] (-1479.005) (-1492.995) * (-1552.815) (-1483.387) (-1559.576) [-1485.487] -- 0:07:08
353000 -- (-1545.244) [-1479.110] (-1486.473) (-1487.057) * (-1533.060) [-1481.425] (-1555.963) (-1482.373) -- 0:07:08
354000 -- (-1535.253) [-1477.858] (-1493.726) (-1496.836) * (-1541.893) (-1484.406) (-1550.464) [-1489.273] -- 0:07:08
355000 -- (-1543.563) [-1472.204] (-1489.885) (-1486.117) * (-1531.054) (-1480.648) (-1558.279) [-1484.408] -- 0:07:06
Average standard deviation of split frequencies: 0.011952
356000 -- (-1549.950) [-1477.414] (-1498.084) (-1484.557) * (-1549.541) (-1477.096) (-1559.976) [-1475.842] -- 0:07:06
357000 -- (-1553.952) (-1485.469) [-1476.794] (-1492.160) * (-1538.025) [-1481.915] (-1554.509) (-1487.991) -- 0:07:06
358000 -- (-1546.876) [-1485.135] (-1473.383) (-1494.801) * (-1536.783) (-1484.931) (-1566.694) [-1480.862] -- 0:07:05
359000 -- (-1552.244) [-1490.916] (-1493.239) (-1510.985) * (-1547.618) [-1482.104] (-1546.160) (-1477.101) -- 0:07:04
360000 -- (-1529.115) (-1489.621) [-1480.402] (-1496.823) * (-1548.872) (-1503.593) (-1561.089) [-1483.375] -- 0:07:04
Average standard deviation of split frequencies: 0.011696
361000 -- (-1548.934) [-1478.899] (-1475.744) (-1491.345) * (-1549.971) [-1501.393] (-1556.285) (-1492.517) -- 0:07:03
362000 -- (-1538.384) (-1480.689) [-1479.334] (-1494.674) * (-1548.362) [-1481.120] (-1560.141) (-1485.222) -- 0:07:02
363000 -- (-1540.188) (-1490.823) (-1477.798) [-1494.721] * (-1540.506) (-1486.880) (-1551.002) [-1477.031] -- 0:07:02
364000 -- (-1550.221) (-1486.883) [-1474.857] (-1483.038) * (-1544.701) (-1484.455) (-1540.910) [-1481.171] -- 0:07:02
365000 -- (-1537.527) (-1475.503) [-1480.338] (-1509.456) * (-1555.900) [-1476.814] (-1552.638) (-1486.374) -- 0:07:01
Average standard deviation of split frequencies: 0.011141
366000 -- (-1536.948) (-1491.588) [-1481.936] (-1503.413) * (-1545.894) (-1477.731) (-1553.688) [-1491.548] -- 0:07:00
367000 -- (-1552.768) (-1483.271) [-1483.639] (-1481.561) * (-1535.455) [-1475.006] (-1543.879) (-1505.357) -- 0:07:00
368000 -- (-1544.961) (-1485.793) [-1478.057] (-1482.211) * (-1537.357) [-1481.238] (-1548.018) (-1493.866) -- 0:06:59
369000 -- (-1549.258) (-1488.529) [-1476.661] (-1484.000) * (-1534.513) [-1479.823] (-1556.996) (-1489.888) -- 0:06:58
370000 -- (-1538.290) (-1478.780) (-1478.199) [-1472.872] * (-1536.699) [-1478.315] (-1579.134) (-1494.373) -- 0:06:58
Average standard deviation of split frequencies: 0.011192
371000 -- (-1534.310) (-1479.994) (-1478.716) [-1481.188] * (-1538.851) (-1476.783) (-1582.620) [-1490.178] -- 0:06:58
372000 -- (-1538.554) (-1494.093) (-1480.306) [-1483.617] * (-1545.925) [-1483.715] (-1554.162) (-1483.957) -- 0:06:56
373000 -- (-1554.248) (-1490.028) (-1482.825) [-1476.894] * (-1562.997) [-1490.705] (-1546.822) (-1490.118) -- 0:06:56
374000 -- (-1558.123) (-1488.231) [-1479.543] (-1486.520) * (-1559.420) [-1484.690] (-1551.296) (-1485.992) -- 0:06:56
375000 -- (-1545.372) (-1503.791) (-1478.780) [-1489.915] * (-1547.270) (-1491.468) (-1545.249) [-1474.928] -- 0:06:55
Average standard deviation of split frequencies: 0.011315
376000 -- (-1532.010) (-1501.478) (-1488.068) [-1485.107] * (-1544.581) (-1495.394) (-1544.216) [-1490.587] -- 0:06:54
377000 -- (-1531.532) (-1495.025) (-1489.516) [-1501.563] * (-1540.921) [-1479.646] (-1537.253) (-1485.346) -- 0:06:54
378000 -- (-1538.020) [-1493.383] (-1483.577) (-1489.357) * (-1540.088) (-1499.428) (-1557.930) [-1489.886] -- 0:06:54
379000 -- (-1529.900) (-1496.150) [-1482.485] (-1489.638) * (-1540.165) [-1483.300] (-1558.068) (-1479.520) -- 0:06:52
380000 -- (-1533.494) [-1481.571] (-1492.139) (-1496.504) * (-1549.886) [-1470.316] (-1566.545) (-1482.749) -- 0:06:52
Average standard deviation of split frequencies: 0.012233
381000 -- (-1544.196) (-1485.941) (-1482.070) [-1489.837] * (-1529.095) (-1486.551) (-1545.145) [-1475.511] -- 0:06:52
382000 -- (-1544.669) (-1479.442) [-1471.354] (-1488.815) * (-1540.431) (-1488.896) (-1558.320) [-1477.563] -- 0:06:52
383000 -- (-1536.837) (-1490.694) [-1471.074] (-1491.788) * (-1523.020) (-1484.338) (-1559.614) [-1483.983] -- 0:06:50
384000 -- (-1536.806) [-1476.080] (-1476.564) (-1498.671) * (-1523.938) [-1492.426] (-1564.082) (-1490.459) -- 0:06:50
385000 -- (-1525.472) [-1477.005] (-1481.797) (-1493.787) * (-1535.827) [-1484.514] (-1550.728) (-1496.018) -- 0:06:50
Average standard deviation of split frequencies: 0.012183
386000 -- (-1540.418) [-1474.661] (-1485.330) (-1486.148) * (-1541.706) (-1487.935) (-1553.759) [-1487.740] -- 0:06:48
387000 -- (-1536.094) (-1476.998) [-1489.902] (-1491.443) * (-1542.130) [-1476.570] (-1551.443) (-1492.427) -- 0:06:48
388000 -- (-1535.117) [-1476.293] (-1485.833) (-1497.085) * (-1533.482) [-1488.133] (-1573.951) (-1472.009) -- 0:06:48
389000 -- (-1529.866) (-1480.993) [-1485.445] (-1497.399) * (-1538.199) [-1491.959] (-1563.262) (-1475.643) -- 0:06:46
390000 -- (-1536.026) [-1490.899] (-1490.745) (-1492.385) * (-1534.148) (-1485.538) (-1567.500) [-1474.270] -- 0:06:46
Average standard deviation of split frequencies: 0.012037
391000 -- (-1554.678) [-1482.199] (-1481.655) (-1494.049) * (-1541.996) (-1486.234) (-1556.986) [-1481.754] -- 0:06:46
392000 -- (-1544.525) [-1479.858] (-1483.227) (-1483.312) * (-1550.343) (-1484.353) (-1552.287) [-1480.619] -- 0:06:46
393000 -- (-1550.541) [-1489.444] (-1491.095) (-1488.773) * (-1529.232) (-1479.904) (-1557.299) [-1481.603] -- 0:06:44
394000 -- (-1543.212) [-1487.626] (-1486.717) (-1480.090) * (-1544.324) (-1488.639) (-1558.044) [-1472.649] -- 0:06:44
395000 -- (-1538.587) [-1502.926] (-1489.943) (-1485.022) * (-1537.435) (-1486.425) (-1556.395) [-1492.089] -- 0:06:44
Average standard deviation of split frequencies: 0.012078
396000 -- (-1551.029) (-1497.512) (-1484.092) [-1486.767] * (-1538.156) [-1476.021] (-1551.784) (-1493.075) -- 0:06:44
397000 -- (-1533.722) (-1480.844) (-1491.384) [-1474.045] * (-1534.105) [-1479.981] (-1564.007) (-1493.323) -- 0:06:42
398000 -- (-1524.565) [-1493.102] (-1500.988) (-1476.861) * (-1518.599) [-1494.970] (-1565.519) (-1507.584) -- 0:06:42
399000 -- (-1543.270) [-1480.234] (-1485.741) (-1485.948) * (-1528.311) [-1487.879] (-1555.976) (-1489.052) -- 0:06:42
400000 -- (-1526.302) (-1480.113) [-1474.846] (-1483.502) * (-1535.890) [-1483.601] (-1571.158) (-1491.372) -- 0:06:40
Average standard deviation of split frequencies: 0.012118
401000 -- (-1547.181) (-1476.081) [-1487.865] (-1496.763) * (-1532.556) [-1482.983] (-1556.326) (-1487.439) -- 0:06:40
402000 -- (-1532.038) (-1479.710) (-1483.434) [-1489.305] * (-1553.385) (-1482.051) (-1546.853) [-1480.757] -- 0:06:40
403000 -- (-1535.339) (-1496.964) [-1486.991] (-1488.154) * (-1533.350) (-1485.004) (-1553.971) [-1477.202] -- 0:06:39
404000 -- (-1538.587) (-1494.466) (-1486.677) [-1485.544] * (-1524.858) [-1477.927] (-1547.826) (-1484.376) -- 0:06:39
405000 -- (-1527.022) (-1477.388) [-1476.190] (-1491.864) * (-1542.461) (-1489.800) (-1549.639) [-1489.491] -- 0:06:38
Average standard deviation of split frequencies: 0.012319
406000 -- (-1528.757) (-1477.368) [-1482.732] (-1489.125) * (-1535.072) [-1472.530] (-1548.143) (-1489.021) -- 0:06:37
407000 -- (-1538.549) (-1478.499) (-1499.233) [-1476.933] * (-1541.723) [-1475.481] (-1571.053) (-1492.002) -- 0:06:37
408000 -- (-1548.867) (-1498.566) (-1485.313) [-1474.030] * (-1541.105) [-1476.680] (-1547.092) (-1493.318) -- 0:06:37
409000 -- (-1552.298) (-1477.939) [-1487.491] (-1477.260) * (-1545.067) [-1486.821] (-1547.825) (-1505.945) -- 0:06:35
410000 -- (-1544.526) (-1497.437) (-1483.021) [-1479.533] * (-1527.714) (-1481.854) (-1564.539) [-1486.679] -- 0:06:35
Average standard deviation of split frequencies: 0.012935
411000 -- (-1548.747) (-1491.157) [-1484.083] (-1486.664) * (-1544.670) [-1477.088] (-1574.703) (-1478.424) -- 0:06:35
412000 -- (-1535.762) [-1477.584] (-1486.022) (-1512.487) * (-1525.239) [-1477.099] (-1554.952) (-1484.165) -- 0:06:35
413000 -- (-1544.565) [-1475.365] (-1493.972) (-1486.748) * (-1529.837) (-1494.883) (-1561.980) [-1491.169] -- 0:06:33
414000 -- (-1538.216) (-1490.292) [-1481.311] (-1488.198) * (-1539.844) (-1487.077) (-1559.814) [-1479.149] -- 0:06:33
415000 -- (-1555.468) (-1484.232) [-1481.406] (-1482.741) * (-1536.862) (-1478.631) (-1555.004) [-1485.164] -- 0:06:33
Average standard deviation of split frequencies: 0.012631
416000 -- (-1549.104) (-1483.004) [-1477.274] (-1487.990) * (-1538.099) (-1485.469) (-1549.306) [-1483.791] -- 0:06:33
417000 -- (-1546.272) [-1479.444] (-1483.864) (-1492.473) * (-1525.906) (-1476.925) (-1559.423) [-1481.591] -- 0:06:31
418000 -- (-1554.099) [-1482.964] (-1497.102) (-1483.539) * (-1525.403) (-1484.657) (-1551.555) [-1480.552] -- 0:06:31
419000 -- (-1546.376) [-1488.185] (-1501.278) (-1483.073) * (-1530.976) (-1476.066) (-1543.281) [-1472.554] -- 0:06:31
420000 -- (-1530.108) [-1484.958] (-1498.608) (-1482.766) * (-1535.969) [-1477.132] (-1553.441) (-1487.733) -- 0:06:29
Average standard deviation of split frequencies: 0.013256
421000 -- (-1544.095) (-1491.159) [-1490.243] (-1489.372) * (-1559.096) (-1473.556) (-1553.316) [-1477.945] -- 0:06:29
422000 -- (-1536.418) [-1494.981] (-1481.902) (-1499.897) * (-1530.008) [-1481.484] (-1561.680) (-1484.816) -- 0:06:28
423000 -- (-1549.206) [-1481.365] (-1483.682) (-1493.196) * (-1536.418) (-1476.285) (-1552.883) [-1483.436] -- 0:06:28
424000 -- (-1528.996) [-1476.841] (-1477.360) (-1501.020) * (-1533.263) [-1480.186] (-1560.571) (-1486.107) -- 0:06:27
425000 -- (-1538.847) (-1477.964) [-1486.705] (-1497.991) * (-1539.400) [-1475.368] (-1549.942) (-1482.410) -- 0:06:26
Average standard deviation of split frequencies: 0.013411
426000 -- (-1537.576) [-1471.865] (-1486.398) (-1508.455) * (-1537.845) (-1479.768) (-1557.511) [-1481.312] -- 0:06:26
427000 -- (-1540.885) [-1480.838] (-1494.214) (-1496.661) * (-1545.616) (-1508.201) (-1552.916) [-1479.178] -- 0:06:26
428000 -- (-1549.287) [-1480.708] (-1481.695) (-1507.805) * (-1538.774) [-1487.161] (-1554.653) (-1476.567) -- 0:06:24
429000 -- (-1542.927) (-1478.841) [-1476.240] (-1506.153) * (-1541.594) [-1491.948] (-1542.935) (-1496.404) -- 0:06:24
430000 -- (-1540.499) (-1487.201) [-1472.372] (-1491.566) * (-1529.466) [-1490.990] (-1558.124) (-1474.988) -- 0:06:24
Average standard deviation of split frequencies: 0.013917
431000 -- (-1536.264) (-1489.313) [-1487.626] (-1509.125) * (-1536.303) [-1477.749] (-1559.193) (-1482.395) -- 0:06:22
432000 -- (-1544.557) [-1479.614] (-1480.314) (-1506.700) * (-1545.609) [-1478.775] (-1561.576) (-1489.723) -- 0:06:22
433000 -- (-1541.671) [-1485.309] (-1475.912) (-1494.241) * (-1537.193) [-1482.025] (-1554.363) (-1513.262) -- 0:06:22
434000 -- (-1548.005) [-1486.005] (-1480.951) (-1510.292) * (-1536.665) [-1480.674] (-1560.164) (-1504.159) -- 0:06:22
435000 -- (-1537.855) [-1483.383] (-1481.490) (-1497.316) * (-1544.964) (-1495.488) (-1564.750) [-1484.816] -- 0:06:20
Average standard deviation of split frequencies: 0.014262
436000 -- (-1534.892) (-1480.677) [-1484.292] (-1496.817) * (-1547.186) [-1484.419] (-1565.635) (-1486.161) -- 0:06:20
437000 -- (-1543.953) (-1489.347) [-1487.453] (-1492.089) * (-1542.222) [-1492.667] (-1557.689) (-1476.363) -- 0:06:20
438000 -- (-1535.450) (-1479.176) [-1482.614] (-1494.872) * (-1534.038) (-1501.078) (-1547.159) [-1485.103] -- 0:06:19
439000 -- (-1536.973) (-1479.472) [-1480.285] (-1491.605) * (-1548.241) (-1486.332) (-1549.354) [-1477.487] -- 0:06:18
440000 -- (-1546.130) [-1483.514] (-1490.058) (-1495.510) * (-1537.962) (-1495.006) (-1555.893) [-1478.697] -- 0:06:18
Average standard deviation of split frequencies: 0.013981
441000 -- (-1540.313) (-1490.090) [-1486.087] (-1494.242) * (-1539.178) [-1482.287] (-1558.798) (-1473.780) -- 0:06:17
442000 -- (-1543.668) [-1482.682] (-1492.151) (-1502.387) * (-1551.713) (-1480.574) (-1557.571) [-1486.032] -- 0:06:17
443000 -- (-1535.936) (-1489.041) [-1481.901] (-1512.662) * (-1528.852) (-1474.182) (-1552.527) [-1490.392] -- 0:06:15
444000 -- (-1547.363) (-1480.565) [-1482.143] (-1513.505) * (-1548.471) [-1484.304] (-1549.246) (-1485.883) -- 0:06:15
445000 -- (-1542.158) [-1477.890] (-1470.317) (-1497.005) * (-1538.003) [-1480.653] (-1552.048) (-1481.107) -- 0:06:14
Average standard deviation of split frequencies: 0.014232
446000 -- (-1536.597) [-1476.023] (-1491.963) (-1495.716) * (-1548.844) (-1486.775) (-1553.530) [-1483.076] -- 0:06:13
447000 -- (-1537.935) [-1480.830] (-1495.056) (-1506.552) * (-1534.270) [-1482.149] (-1553.344) (-1486.975) -- 0:06:12
448000 -- (-1545.386) (-1476.654) [-1478.449] (-1506.492) * (-1541.555) [-1482.839] (-1540.734) (-1482.783) -- 0:06:12
449000 -- (-1527.959) (-1499.987) [-1470.585] (-1495.490) * (-1527.729) [-1479.246] (-1557.100) (-1482.632) -- 0:06:10
450000 -- (-1535.167) (-1490.138) [-1471.986] (-1491.689) * (-1533.683) (-1482.155) (-1548.868) [-1485.800] -- 0:06:10
Average standard deviation of split frequencies: 0.013717
451000 -- (-1553.030) (-1479.807) [-1473.471] (-1508.045) * (-1541.900) (-1483.930) (-1544.774) [-1476.318] -- 0:06:08
452000 -- (-1536.374) [-1485.410] (-1480.196) (-1502.701) * (-1571.284) [-1478.785] (-1534.580) (-1480.507) -- 0:06:08
453000 -- (-1557.171) (-1483.127) [-1479.393] (-1485.381) * (-1543.696) (-1481.862) (-1548.181) [-1478.882] -- 0:06:07
454000 -- (-1536.690) (-1503.031) (-1496.402) [-1485.671] * (-1539.447) (-1485.580) (-1558.693) [-1476.380] -- 0:06:06
455000 -- (-1543.345) [-1483.618] (-1496.614) (-1500.156) * (-1537.275) (-1480.295) (-1550.875) [-1474.725] -- 0:06:05
Average standard deviation of split frequencies: 0.013295
456000 -- (-1556.346) [-1483.974] (-1498.618) (-1487.301) * (-1534.048) [-1482.136] (-1547.383) (-1488.472) -- 0:06:05
457000 -- (-1545.995) (-1480.727) (-1498.397) [-1471.845] * (-1541.491) [-1475.507] (-1553.995) (-1487.795) -- 0:06:03
458000 -- (-1529.935) [-1492.092] (-1501.288) (-1492.425) * (-1537.673) (-1478.871) (-1558.581) [-1478.019] -- 0:06:03
459000 -- (-1541.711) (-1517.146) (-1502.966) [-1476.107] * (-1542.511) (-1479.386) (-1554.899) [-1479.248] -- 0:06:01
460000 -- (-1553.234) [-1480.650] (-1517.624) (-1481.410) * (-1537.229) [-1472.061] (-1542.204) (-1476.346) -- 0:06:01
Average standard deviation of split frequencies: 0.012868
461000 -- (-1544.856) (-1490.340) (-1491.659) [-1490.168] * (-1539.064) (-1485.638) (-1558.125) [-1476.005] -- 0:06:00
462000 -- (-1545.861) [-1501.044] (-1486.060) (-1488.017) * (-1537.916) (-1487.708) (-1561.369) [-1487.572] -- 0:05:59
463000 -- (-1556.531) [-1481.649] (-1475.889) (-1493.413) * (-1538.339) (-1477.483) (-1560.244) [-1475.225] -- 0:05:58
464000 -- (-1548.619) (-1494.272) [-1482.970] (-1483.443) * (-1529.846) (-1485.617) (-1556.748) [-1476.570] -- 0:05:58
465000 -- (-1549.594) (-1479.787) (-1476.526) [-1481.384] * (-1532.087) (-1490.128) (-1555.447) [-1480.541] -- 0:05:56
Average standard deviation of split frequencies: 0.012731
466000 -- (-1547.832) (-1484.466) (-1490.149) [-1475.007] * (-1535.471) [-1481.824] (-1562.519) (-1476.191) -- 0:05:56
467000 -- (-1540.289) [-1479.882] (-1498.816) (-1483.335) * (-1535.078) (-1495.905) (-1558.824) [-1483.197] -- 0:05:56
468000 -- (-1547.569) (-1497.441) [-1480.618] (-1488.856) * (-1525.049) (-1496.592) (-1558.963) [-1478.898] -- 0:05:54
469000 -- (-1530.584) (-1500.820) [-1478.730] (-1494.172) * (-1523.867) [-1490.647] (-1552.563) (-1477.496) -- 0:05:54
470000 -- (-1538.063) (-1485.903) [-1490.654] (-1478.555) * (-1545.869) (-1495.727) (-1549.759) [-1471.856] -- 0:05:54
Average standard deviation of split frequencies: 0.012312
471000 -- (-1543.015) (-1499.697) (-1494.221) [-1477.041] * (-1548.925) (-1486.461) (-1557.560) [-1484.935] -- 0:05:53
472000 -- (-1546.998) (-1496.258) (-1479.786) [-1476.987] * (-1556.871) [-1476.482] (-1559.081) (-1481.054) -- 0:05:52
473000 -- (-1541.563) (-1486.101) (-1488.346) [-1492.470] * (-1561.733) [-1475.054] (-1547.748) (-1501.314) -- 0:05:52
474000 -- (-1527.686) (-1486.974) (-1486.043) [-1482.945] * (-1544.454) [-1480.932] (-1550.622) (-1488.809) -- 0:05:51
475000 -- (-1553.710) [-1478.921] (-1483.766) (-1488.175) * (-1535.658) [-1493.964] (-1553.144) (-1494.261) -- 0:05:51
Average standard deviation of split frequencies: 0.012053
476000 -- (-1546.291) (-1483.459) [-1490.685] (-1481.893) * (-1531.818) [-1474.884] (-1555.147) (-1486.121) -- 0:05:50
477000 -- (-1547.805) [-1488.154] (-1495.708) (-1497.628) * (-1534.915) [-1476.163] (-1547.270) (-1499.417) -- 0:05:49
478000 -- (-1544.841) (-1478.578) (-1483.999) [-1504.627] * (-1543.627) [-1473.118] (-1556.178) (-1493.368) -- 0:05:49
479000 -- (-1550.334) [-1471.285] (-1488.041) (-1497.797) * (-1533.272) [-1474.389] (-1565.413) (-1491.495) -- 0:05:48
480000 -- (-1527.597) (-1481.534) [-1479.423] (-1481.559) * (-1543.106) [-1473.766] (-1567.689) (-1480.677) -- 0:05:47
Average standard deviation of split frequencies: 0.011842
481000 -- (-1534.207) (-1480.429) [-1485.914] (-1483.812) * (-1552.172) [-1482.840] (-1542.368) (-1478.013) -- 0:05:47
482000 -- (-1537.295) [-1490.377] (-1481.517) (-1481.078) * (-1540.126) [-1477.302] (-1565.395) (-1492.772) -- 0:05:46
483000 -- (-1556.957) (-1503.819) [-1483.935] (-1499.844) * (-1543.177) (-1482.513) (-1548.771) [-1484.053] -- 0:05:45
484000 -- (-1544.059) (-1510.502) [-1489.065] (-1485.500) * (-1551.837) (-1489.803) (-1552.218) [-1484.716] -- 0:05:45
485000 -- (-1542.381) [-1491.302] (-1493.342) (-1491.338) * (-1562.951) (-1484.277) (-1556.289) [-1474.408] -- 0:05:44
Average standard deviation of split frequencies: 0.012171
486000 -- (-1546.440) (-1490.943) [-1488.575] (-1499.658) * (-1548.754) (-1481.799) (-1551.450) [-1480.177] -- 0:05:43
487000 -- (-1550.035) (-1488.247) (-1494.764) [-1479.978] * (-1550.842) (-1478.109) (-1551.511) [-1488.074] -- 0:05:43
488000 -- (-1547.239) (-1484.875) (-1496.575) [-1481.444] * (-1531.682) (-1475.181) (-1554.880) [-1476.689] -- 0:05:43
489000 -- (-1564.381) (-1484.695) (-1498.759) [-1481.477] * (-1536.965) (-1496.633) (-1556.686) [-1480.605] -- 0:05:41
490000 -- (-1545.000) (-1484.599) (-1490.177) [-1476.102] * (-1536.989) [-1493.835] (-1560.111) (-1498.985) -- 0:05:41
Average standard deviation of split frequencies: 0.012032
491000 -- (-1559.371) [-1477.709] (-1484.113) (-1482.573) * (-1542.010) (-1490.313) (-1561.217) [-1488.318] -- 0:05:41
492000 -- (-1543.464) (-1484.099) [-1486.150] (-1486.669) * (-1534.618) (-1489.805) (-1543.544) [-1473.553] -- 0:05:40
493000 -- (-1534.630) (-1476.639) (-1480.575) [-1481.352] * (-1532.294) [-1480.874] (-1557.548) (-1486.761) -- 0:05:39
494000 -- (-1543.036) [-1478.100] (-1483.941) (-1496.884) * (-1535.039) [-1472.936] (-1557.907) (-1482.653) -- 0:05:39
495000 -- (-1529.864) (-1482.776) [-1479.193] (-1520.562) * (-1542.398) (-1485.247) (-1571.521) [-1477.877] -- 0:05:38
Average standard deviation of split frequencies: 0.011925
496000 -- (-1532.260) [-1489.073] (-1480.354) (-1500.019) * (-1529.879) (-1487.845) (-1552.228) [-1480.286] -- 0:05:37
497000 -- (-1538.460) (-1473.148) [-1477.577] (-1523.004) * (-1532.611) (-1489.424) (-1563.626) [-1476.781] -- 0:05:37
498000 -- (-1548.346) (-1477.191) [-1479.770] (-1517.277) * (-1555.729) (-1490.733) (-1566.393) [-1477.391] -- 0:05:36
499000 -- (-1551.420) [-1473.597] (-1492.152) (-1507.389) * (-1551.438) (-1485.794) (-1549.495) [-1481.597] -- 0:05:36
500000 -- (-1534.911) [-1474.937] (-1491.535) (-1488.774) * (-1541.312) (-1483.774) (-1545.719) [-1488.266] -- 0:05:35
Average standard deviation of split frequencies: 0.012470
501000 -- (-1552.764) (-1475.106) (-1488.581) [-1485.480] * (-1553.542) (-1484.971) (-1547.827) [-1481.894] -- 0:05:34
502000 -- (-1550.668) (-1476.667) (-1491.511) [-1483.931] * (-1548.000) (-1497.759) (-1559.000) [-1482.106] -- 0:05:34
503000 -- (-1564.270) (-1498.364) (-1496.150) [-1487.677] * (-1533.608) (-1482.480) (-1560.552) [-1477.664] -- 0:05:32
504000 -- (-1542.262) (-1496.929) (-1484.786) [-1493.099] * (-1548.722) (-1482.565) (-1555.664) [-1486.420] -- 0:05:32
505000 -- (-1537.974) (-1479.442) (-1503.772) [-1484.006] * (-1532.207) (-1483.831) (-1566.413) [-1488.742] -- 0:05:32
Average standard deviation of split frequencies: 0.012679
506000 -- (-1551.414) (-1498.700) [-1484.676] (-1491.064) * (-1534.856) (-1481.493) (-1565.077) [-1484.212] -- 0:05:31
507000 -- (-1535.839) (-1511.624) [-1481.748] (-1485.032) * (-1519.761) (-1474.518) (-1568.941) [-1478.699] -- 0:05:30
508000 -- (-1551.560) (-1503.751) [-1479.070] (-1492.430) * (-1539.376) [-1480.815] (-1552.682) (-1477.489) -- 0:05:30
509000 -- (-1537.973) (-1490.098) (-1489.736) [-1490.972] * (-1559.367) (-1487.955) (-1556.878) [-1482.225] -- 0:05:29
510000 -- (-1534.025) (-1481.649) (-1493.727) [-1474.120] * (-1543.603) [-1486.283] (-1564.036) (-1471.381) -- 0:05:28
Average standard deviation of split frequencies: 0.012970
511000 -- (-1537.980) (-1499.166) [-1480.994] (-1480.481) * (-1540.785) (-1490.921) (-1566.466) [-1485.665] -- 0:05:28
512000 -- (-1531.395) (-1501.511) [-1473.680] (-1493.732) * (-1547.478) [-1490.198] (-1547.614) (-1477.340) -- 0:05:27
513000 -- (-1529.556) (-1500.487) [-1483.133] (-1490.650) * (-1553.609) [-1479.254] (-1565.524) (-1482.622) -- 0:05:26
514000 -- (-1525.437) (-1504.976) (-1491.999) [-1481.753] * (-1536.359) [-1479.700] (-1549.374) (-1489.834) -- 0:05:26
515000 -- (-1528.038) (-1492.854) (-1505.688) [-1482.709] * (-1542.770) [-1486.081] (-1564.914) (-1488.697) -- 0:05:24
Average standard deviation of split frequencies: 0.012744
516000 -- (-1548.344) (-1501.969) [-1487.227] (-1482.015) * (-1554.450) [-1484.446] (-1558.630) (-1492.721) -- 0:05:24
517000 -- (-1532.407) (-1480.609) (-1488.680) [-1476.412] * (-1545.801) (-1491.164) (-1574.856) [-1481.569] -- 0:05:23
518000 -- (-1542.754) (-1483.413) [-1480.295] (-1489.588) * (-1528.600) (-1485.938) (-1556.441) [-1476.407] -- 0:05:22
519000 -- (-1542.310) [-1474.540] (-1483.789) (-1485.634) * (-1531.691) [-1486.671] (-1552.346) (-1489.967) -- 0:05:21
520000 -- (-1544.834) (-1492.862) (-1482.458) [-1476.108] * (-1531.274) [-1479.603] (-1558.205) (-1482.401) -- 0:05:21
Average standard deviation of split frequencies: 0.012608
521000 -- (-1556.392) (-1483.108) (-1489.436) [-1474.384] * (-1523.587) (-1481.926) (-1575.361) [-1478.525] -- 0:05:19
522000 -- (-1534.792) [-1480.190] (-1496.952) (-1494.964) * (-1532.752) (-1475.779) (-1567.445) [-1489.359] -- 0:05:19
523000 -- (-1534.469) [-1495.466] (-1481.318) (-1500.024) * (-1550.196) (-1485.222) (-1568.188) [-1487.907] -- 0:05:18
524000 -- (-1547.583) [-1477.897] (-1482.581) (-1493.883) * (-1550.794) (-1487.726) (-1552.942) [-1478.763] -- 0:05:17
525000 -- (-1545.934) (-1492.556) [-1474.677] (-1491.519) * (-1524.757) (-1483.837) (-1567.876) [-1482.879] -- 0:05:16
Average standard deviation of split frequencies: 0.012350
526000 -- (-1537.673) (-1482.219) [-1477.162] (-1493.701) * (-1521.628) [-1479.853] (-1568.539) (-1488.633) -- 0:05:15
527000 -- (-1528.869) (-1483.259) [-1484.401] (-1491.567) * (-1524.681) [-1478.547] (-1557.556) (-1489.805) -- 0:05:15
528000 -- (-1532.213) (-1489.742) [-1476.944] (-1483.163) * (-1537.875) (-1481.821) (-1558.714) [-1484.232] -- 0:05:13
529000 -- (-1534.810) (-1492.505) [-1478.298] (-1497.679) * (-1540.728) (-1484.598) (-1571.453) [-1480.596] -- 0:05:13
530000 -- (-1544.964) (-1502.578) [-1476.079] (-1488.070) * (-1533.482) [-1473.424] (-1564.649) (-1496.471) -- 0:05:12
Average standard deviation of split frequencies: 0.013014
531000 -- (-1537.584) (-1500.670) (-1484.010) [-1476.106] * (-1535.183) [-1483.616] (-1569.339) (-1494.303) -- 0:05:11
532000 -- (-1541.545) (-1490.709) [-1476.814] (-1483.861) * (-1544.765) (-1493.752) (-1569.069) [-1471.804] -- 0:05:10
533000 -- (-1549.925) (-1484.359) (-1478.768) [-1481.195] * (-1546.049) (-1502.767) (-1570.008) [-1484.566] -- 0:05:10
534000 -- (-1537.924) (-1506.637) [-1470.158] (-1477.339) * (-1536.520) (-1483.214) (-1558.925) [-1482.804] -- 0:05:08
535000 -- (-1549.904) (-1497.683) [-1480.648] (-1485.724) * (-1531.792) [-1486.834] (-1544.213) (-1492.372) -- 0:05:08
Average standard deviation of split frequencies: 0.013016
536000 -- (-1545.358) (-1496.129) [-1479.995] (-1477.576) * (-1537.780) [-1478.846] (-1549.411) (-1483.713) -- 0:05:07
537000 -- (-1547.091) (-1493.899) [-1476.161] (-1496.351) * (-1528.504) [-1491.254] (-1556.986) (-1487.385) -- 0:05:06
538000 -- (-1548.384) (-1494.265) (-1478.300) [-1487.116] * (-1539.398) [-1482.826] (-1566.093) (-1478.635) -- 0:05:05
539000 -- (-1544.806) (-1486.115) (-1484.889) [-1481.731] * (-1537.336) [-1485.757] (-1561.774) (-1497.113) -- 0:05:05
540000 -- (-1551.167) (-1481.271) [-1488.246] (-1492.122) * (-1537.417) [-1484.168] (-1545.835) (-1493.829) -- 0:05:04
Average standard deviation of split frequencies: 0.013514
541000 -- (-1538.232) [-1472.596] (-1503.882) (-1490.573) * (-1538.742) [-1470.468] (-1546.608) (-1481.807) -- 0:05:03
542000 -- (-1523.401) [-1481.723] (-1483.286) (-1493.697) * (-1530.764) [-1474.766] (-1552.604) (-1502.675) -- 0:05:02
543000 -- (-1527.040) (-1481.329) (-1484.064) [-1485.177] * (-1529.044) [-1480.228] (-1542.405) (-1485.746) -- 0:05:02
544000 -- (-1546.322) [-1477.588] (-1486.370) (-1491.176) * (-1527.851) (-1487.092) (-1551.484) [-1481.127] -- 0:05:01
545000 -- (-1556.527) [-1481.963] (-1482.832) (-1497.736) * (-1535.231) (-1490.156) (-1548.715) [-1486.364] -- 0:05:00
Average standard deviation of split frequencies: 0.013876
546000 -- (-1555.070) (-1488.704) [-1484.253] (-1489.330) * (-1533.784) [-1486.118] (-1549.151) (-1489.162) -- 0:05:00
547000 -- (-1544.636) (-1490.365) [-1478.902] (-1485.216) * (-1539.879) (-1493.741) (-1541.279) [-1478.199] -- 0:04:58
548000 -- (-1537.523) (-1488.098) [-1477.633] (-1499.149) * (-1540.189) (-1475.622) (-1554.318) [-1476.375] -- 0:04:58
549000 -- (-1544.169) [-1476.028] (-1474.714) (-1492.325) * (-1524.496) [-1484.220] (-1556.676) (-1487.553) -- 0:04:57
550000 -- (-1549.480) (-1485.853) [-1483.589] (-1502.467) * (-1536.953) [-1482.531] (-1550.054) (-1472.086) -- 0:04:57
Average standard deviation of split frequencies: 0.014472
551000 -- (-1546.619) [-1477.437] (-1478.769) (-1497.447) * (-1534.836) (-1486.247) (-1542.041) [-1480.789] -- 0:04:55
552000 -- (-1552.781) (-1474.309) [-1477.389] (-1508.556) * (-1539.436) (-1490.411) (-1553.765) [-1478.701] -- 0:04:54
553000 -- (-1562.413) (-1480.823) [-1481.394] (-1504.490) * (-1539.657) [-1487.301] (-1540.200) (-1482.816) -- 0:04:54
554000 -- (-1545.632) [-1480.972] (-1485.665) (-1497.266) * (-1539.134) (-1498.564) (-1548.557) [-1478.290] -- 0:04:53
555000 -- (-1532.397) [-1479.425] (-1494.564) (-1487.487) * (-1536.267) (-1490.072) (-1550.720) [-1484.397] -- 0:04:52
Average standard deviation of split frequencies: 0.014165
556000 -- (-1535.597) [-1478.424] (-1494.475) (-1497.842) * (-1548.677) (-1489.217) (-1555.595) [-1481.005] -- 0:04:51
557000 -- (-1539.649) [-1475.627] (-1495.047) (-1493.817) * (-1537.901) [-1491.708] (-1575.898) (-1500.252) -- 0:04:51
558000 -- (-1542.911) (-1473.487) (-1485.652) [-1483.138] * (-1530.492) (-1500.185) (-1550.381) [-1487.309] -- 0:04:49
559000 -- (-1558.481) [-1473.904] (-1490.667) (-1495.092) * (-1535.154) [-1475.173] (-1550.003) (-1488.138) -- 0:04:49
560000 -- (-1549.863) (-1478.730) (-1495.009) [-1485.033] * (-1558.145) (-1478.777) (-1557.277) [-1481.132] -- 0:04:48
Average standard deviation of split frequencies: 0.014273
561000 -- (-1545.513) (-1482.134) [-1483.629] (-1474.966) * (-1532.776) [-1473.496] (-1561.465) (-1490.880) -- 0:04:47
562000 -- (-1555.612) (-1489.636) (-1503.685) [-1485.298] * (-1542.108) [-1475.749] (-1559.568) (-1486.983) -- 0:04:46
563000 -- (-1542.293) (-1492.365) (-1481.254) [-1485.291] * (-1547.987) [-1481.650] (-1564.935) (-1494.158) -- 0:04:46
564000 -- (-1541.323) (-1480.248) (-1489.618) [-1480.938] * (-1550.033) (-1472.573) (-1556.235) [-1484.716] -- 0:04:45
565000 -- (-1541.468) [-1478.999] (-1483.059) (-1484.240) * (-1550.168) [-1476.182] (-1558.315) (-1481.767) -- 0:04:44
Average standard deviation of split frequencies: 0.014238
566000 -- (-1535.690) (-1493.391) [-1476.391] (-1473.777) * (-1545.756) [-1490.690] (-1552.137) (-1488.395) -- 0:04:43
567000 -- (-1540.344) (-1472.303) [-1480.130] (-1478.263) * (-1548.512) (-1489.171) (-1555.189) [-1480.904] -- 0:04:43
568000 -- (-1550.621) [-1485.101] (-1489.255) (-1481.626) * (-1537.844) [-1485.213] (-1554.894) (-1482.981) -- 0:04:42
569000 -- (-1541.466) [-1485.908] (-1485.642) (-1497.218) * (-1541.434) (-1492.371) (-1562.019) [-1480.100] -- 0:04:41
570000 -- (-1548.776) (-1493.918) [-1475.578] (-1480.128) * (-1532.500) [-1492.802] (-1560.684) (-1477.569) -- 0:04:41
Average standard deviation of split frequencies: 0.014587
571000 -- (-1537.620) [-1481.319] (-1488.351) (-1471.007) * (-1533.342) (-1483.164) (-1553.461) [-1482.866] -- 0:04:40
572000 -- (-1558.014) [-1473.411] (-1486.570) (-1496.292) * (-1540.827) [-1484.470] (-1566.145) (-1490.406) -- 0:04:39
573000 -- (-1543.692) [-1486.654] (-1492.283) (-1483.364) * (-1547.828) [-1486.005] (-1567.046) (-1495.223) -- 0:04:39
574000 -- (-1551.351) (-1484.726) [-1487.316] (-1478.222) * (-1542.177) (-1480.516) (-1555.439) [-1483.957] -- 0:04:38
575000 -- (-1537.961) [-1486.702] (-1494.268) (-1485.872) * (-1537.034) (-1494.384) (-1543.140) [-1491.417] -- 0:04:37
Average standard deviation of split frequencies: 0.013995
576000 -- (-1548.035) [-1486.132] (-1480.728) (-1493.246) * (-1539.907) [-1482.468] (-1554.191) (-1483.574) -- 0:04:36
577000 -- (-1540.552) (-1485.424) [-1477.759] (-1494.720) * (-1548.838) [-1478.313] (-1553.660) (-1480.085) -- 0:04:36
578000 -- (-1546.873) [-1492.275] (-1481.815) (-1495.303) * (-1547.946) [-1483.190] (-1551.010) (-1490.921) -- 0:04:35
579000 -- (-1545.405) (-1479.049) (-1503.610) [-1482.202] * (-1528.401) [-1488.754] (-1545.694) (-1477.474) -- 0:04:34
580000 -- (-1544.114) [-1479.456] (-1492.661) (-1480.225) * (-1531.324) [-1483.977] (-1555.942) (-1484.331) -- 0:04:33
Average standard deviation of split frequencies: 0.014613
581000 -- (-1548.532) [-1477.522] (-1498.564) (-1484.981) * (-1550.478) (-1492.787) (-1543.338) [-1475.119] -- 0:04:33
582000 -- (-1544.380) [-1477.086] (-1495.240) (-1486.883) * (-1529.911) (-1495.220) (-1542.728) [-1475.012] -- 0:04:32
583000 -- (-1548.855) (-1480.073) (-1494.414) [-1483.371] * (-1537.017) [-1479.760] (-1533.045) (-1488.804) -- 0:04:31
584000 -- (-1547.952) (-1485.698) (-1491.005) [-1492.523] * (-1545.986) [-1486.760] (-1555.834) (-1486.369) -- 0:04:30
585000 -- (-1531.016) [-1476.768] (-1491.501) (-1486.283) * (-1530.214) [-1487.829] (-1551.105) (-1504.911) -- 0:04:30
Average standard deviation of split frequencies: 0.014735
586000 -- (-1550.074) (-1482.771) (-1484.337) [-1492.126] * (-1544.773) [-1479.068] (-1538.452) (-1508.961) -- 0:04:29
587000 -- (-1540.887) [-1493.393] (-1483.937) (-1491.532) * (-1535.204) (-1488.926) (-1555.592) [-1493.343] -- 0:04:28
588000 -- (-1544.990) (-1481.010) (-1485.334) [-1478.706] * (-1538.703) [-1473.890] (-1562.679) (-1480.100) -- 0:04:27
589000 -- (-1545.442) (-1479.926) [-1483.458] (-1479.943) * (-1527.296) [-1484.132] (-1552.216) (-1484.602) -- 0:04:27
590000 -- (-1546.042) (-1494.361) [-1487.520] (-1485.172) * (-1535.048) [-1489.832] (-1559.789) (-1477.914) -- 0:04:26
Average standard deviation of split frequencies: 0.014805
591000 -- (-1542.128) (-1493.990) [-1489.387] (-1481.362) * (-1536.838) [-1477.419] (-1558.610) (-1483.889) -- 0:04:25
592000 -- (-1542.165) (-1492.706) [-1483.198] (-1485.015) * (-1542.646) (-1482.047) (-1557.007) [-1490.401] -- 0:04:24
593000 -- (-1539.139) [-1489.411] (-1478.660) (-1480.136) * (-1540.709) (-1481.100) (-1558.787) [-1484.014] -- 0:04:23
594000 -- (-1546.584) (-1495.566) [-1479.655] (-1477.680) * (-1542.593) [-1474.497] (-1559.298) (-1483.426) -- 0:04:23
595000 -- (-1555.741) (-1492.651) [-1476.670] (-1480.436) * (-1539.342) (-1488.677) (-1547.963) [-1495.892] -- 0:04:22
Average standard deviation of split frequencies: 0.014494
596000 -- (-1540.809) (-1487.949) [-1473.701] (-1484.176) * (-1533.423) (-1489.243) (-1567.713) [-1485.129] -- 0:04:21
597000 -- (-1549.238) (-1493.694) [-1481.152] (-1481.110) * (-1539.868) (-1483.507) (-1546.194) [-1484.595] -- 0:04:20
598000 -- (-1544.947) (-1478.346) (-1487.206) [-1482.595] * (-1522.660) [-1479.170] (-1553.483) (-1486.423) -- 0:04:20
599000 -- (-1533.482) [-1482.233] (-1484.597) (-1486.229) * (-1535.019) [-1477.050] (-1556.870) (-1481.234) -- 0:04:19
600000 -- (-1525.549) [-1480.884] (-1487.533) (-1517.998) * (-1535.344) [-1483.855] (-1552.955) (-1490.618) -- 0:04:18
Average standard deviation of split frequencies: 0.014421
601000 -- (-1538.413) (-1496.190) (-1480.755) [-1482.015] * (-1534.562) [-1483.482] (-1548.193) (-1494.571) -- 0:04:17
602000 -- (-1542.791) (-1484.609) (-1487.989) [-1470.943] * (-1529.922) [-1482.907] (-1545.786) (-1487.029) -- 0:04:17
603000 -- (-1552.548) [-1482.124] (-1489.396) (-1489.258) * (-1538.591) [-1473.621] (-1554.625) (-1490.141) -- 0:04:16
604000 -- (-1542.991) [-1491.596] (-1481.305) (-1488.053) * (-1548.599) (-1479.588) (-1552.811) [-1478.094] -- 0:04:15
605000 -- (-1542.715) (-1491.032) [-1473.248] (-1500.781) * (-1543.597) (-1492.359) (-1558.187) [-1485.098] -- 0:04:14
Average standard deviation of split frequencies: 0.013496
606000 -- (-1548.783) (-1498.530) [-1488.541] (-1484.614) * (-1531.730) (-1485.848) (-1557.366) [-1483.622] -- 0:04:14
607000 -- (-1535.960) [-1486.179] (-1484.518) (-1486.531) * (-1537.838) (-1494.847) (-1571.657) [-1488.902] -- 0:04:13
608000 -- (-1548.035) (-1492.445) [-1478.833] (-1482.237) * (-1554.393) [-1485.208] (-1560.641) (-1483.829) -- 0:04:12
609000 -- (-1538.147) (-1499.044) (-1485.578) [-1483.037] * (-1542.680) [-1476.294] (-1560.553) (-1490.755) -- 0:04:11
610000 -- (-1547.801) (-1501.214) [-1478.839] (-1486.371) * (-1534.814) [-1483.271] (-1551.301) (-1483.443) -- 0:04:11
Average standard deviation of split frequencies: 0.013935
611000 -- (-1549.771) (-1493.676) (-1492.045) [-1487.197] * (-1521.659) (-1485.572) (-1570.454) [-1476.752] -- 0:04:10
612000 -- (-1533.844) (-1491.848) [-1471.684] (-1482.886) * (-1526.670) [-1485.200] (-1562.161) (-1485.725) -- 0:04:09
613000 -- (-1542.807) (-1494.272) (-1474.284) [-1480.347] * (-1537.050) [-1479.699] (-1565.742) (-1494.088) -- 0:04:08
614000 -- (-1533.929) (-1480.691) [-1481.782] (-1481.287) * (-1538.969) (-1481.664) (-1547.403) [-1481.051] -- 0:04:07
615000 -- (-1547.851) (-1476.691) (-1507.383) [-1487.345] * (-1529.859) [-1477.786] (-1553.425) (-1486.409) -- 0:04:07
Average standard deviation of split frequencies: 0.013304
616000 -- (-1545.888) [-1476.889] (-1493.792) (-1499.372) * (-1539.228) (-1487.119) (-1563.047) [-1475.823] -- 0:04:06
617000 -- (-1548.553) [-1472.938] (-1489.565) (-1493.822) * (-1540.371) [-1484.500] (-1548.312) (-1485.883) -- 0:04:05
618000 -- (-1531.129) (-1481.957) (-1492.583) [-1484.513] * (-1543.126) (-1470.080) (-1550.642) [-1474.239] -- 0:04:04
619000 -- (-1535.642) (-1507.961) (-1488.283) [-1479.750] * (-1538.633) (-1475.017) (-1547.576) [-1488.821] -- 0:04:04
620000 -- (-1535.375) (-1515.933) [-1485.279] (-1482.033) * (-1535.712) (-1488.219) (-1545.787) [-1475.810] -- 0:04:03
Average standard deviation of split frequencies: 0.013766
621000 -- (-1559.404) (-1498.005) (-1484.233) [-1475.351] * (-1532.955) (-1489.540) (-1555.921) [-1480.631] -- 0:04:02
622000 -- (-1551.452) (-1493.100) (-1487.602) [-1480.212] * (-1552.188) [-1480.981] (-1552.240) (-1494.210) -- 0:04:01
623000 -- (-1549.919) (-1484.326) (-1473.041) [-1489.087] * (-1544.785) [-1485.605] (-1558.255) (-1493.830) -- 0:04:01
624000 -- (-1557.569) (-1476.145) [-1482.131] (-1492.632) * (-1550.899) [-1482.703] (-1555.998) (-1497.970) -- 0:04:00
625000 -- (-1548.958) [-1478.106] (-1501.094) (-1490.975) * (-1542.571) [-1472.463] (-1542.441) (-1478.166) -- 0:04:00
Average standard deviation of split frequencies: 0.013720
626000 -- (-1548.495) [-1479.246] (-1496.340) (-1484.556) * (-1536.292) [-1477.718] (-1538.618) (-1491.631) -- 0:03:58
627000 -- (-1548.803) [-1479.789] (-1512.405) (-1475.837) * (-1543.034) (-1491.164) (-1547.680) [-1490.604] -- 0:03:58
628000 -- (-1538.559) (-1479.813) (-1496.384) [-1477.486] * (-1530.485) (-1495.020) (-1556.439) [-1475.831] -- 0:03:57
629000 -- (-1541.309) [-1488.634] (-1523.217) (-1481.285) * (-1531.283) (-1491.924) (-1551.125) [-1478.433] -- 0:03:57
630000 -- (-1545.935) (-1495.195) [-1489.279] (-1480.428) * (-1537.197) (-1498.361) (-1548.499) [-1473.977] -- 0:03:56
Average standard deviation of split frequencies: 0.013691
631000 -- (-1542.665) (-1492.074) (-1498.892) [-1478.732] * (-1541.090) [-1475.539] (-1559.683) (-1483.195) -- 0:03:55
632000 -- (-1543.666) (-1498.384) (-1490.611) [-1483.775] * (-1538.246) [-1480.615] (-1552.462) (-1479.509) -- 0:03:54
633000 -- (-1542.505) [-1488.180] (-1478.289) (-1482.377) * (-1536.689) (-1493.575) (-1563.480) [-1472.956] -- 0:03:54
634000 -- (-1550.911) (-1482.491) (-1486.039) [-1490.226] * (-1547.103) [-1473.673] (-1551.851) (-1496.878) -- 0:03:53
635000 -- (-1540.336) [-1480.603] (-1499.024) (-1483.336) * (-1543.876) [-1483.261] (-1559.079) (-1491.143) -- 0:03:52
Average standard deviation of split frequencies: 0.013342
636000 -- (-1531.239) [-1474.082] (-1507.432) (-1476.429) * (-1529.558) (-1483.347) (-1557.224) [-1486.367] -- 0:03:51
637000 -- (-1541.812) [-1480.549] (-1484.224) (-1493.544) * (-1537.305) [-1478.704] (-1545.766) (-1478.017) -- 0:03:51
638000 -- (-1551.907) (-1487.178) [-1478.267] (-1489.036) * (-1531.185) [-1488.085] (-1560.860) (-1486.382) -- 0:03:50
639000 -- (-1526.904) (-1499.223) [-1481.304] (-1492.509) * (-1546.374) (-1481.345) (-1549.485) [-1471.584] -- 0:03:49
640000 -- (-1541.565) (-1506.442) (-1493.496) [-1481.643] * (-1542.842) [-1485.496] (-1567.076) (-1479.772) -- 0:03:48
Average standard deviation of split frequencies: 0.013336
641000 -- (-1534.837) [-1502.802] (-1485.712) (-1491.243) * (-1542.626) [-1473.595] (-1552.674) (-1482.407) -- 0:03:48
642000 -- (-1545.023) (-1493.710) (-1494.726) [-1486.021] * (-1539.680) (-1484.881) (-1551.461) [-1479.196] -- 0:03:47
643000 -- (-1545.111) (-1498.059) (-1486.239) [-1488.855] * (-1543.165) [-1492.496] (-1555.674) (-1482.753) -- 0:03:46
644000 -- (-1536.071) [-1484.198] (-1502.166) (-1474.130) * (-1535.023) [-1475.118] (-1563.508) (-1487.468) -- 0:03:46
645000 -- (-1533.167) [-1484.474] (-1503.174) (-1486.741) * (-1537.054) (-1476.962) (-1545.985) [-1476.295] -- 0:03:45
Average standard deviation of split frequencies: 0.012815
646000 -- (-1539.950) (-1487.139) (-1496.811) [-1490.910] * (-1555.799) [-1475.521] (-1545.374) (-1482.755) -- 0:03:44
647000 -- (-1534.572) (-1494.361) (-1518.166) [-1481.768] * (-1551.715) [-1485.079] (-1574.101) (-1482.945) -- 0:03:43
648000 -- (-1546.523) (-1503.503) (-1499.122) [-1479.898] * (-1541.543) [-1479.640] (-1554.715) (-1483.422) -- 0:03:43
649000 -- (-1537.009) (-1501.512) (-1508.015) [-1477.427] * (-1536.138) (-1491.948) (-1561.464) [-1477.249] -- 0:03:42
650000 -- (-1532.015) [-1491.326] (-1492.476) (-1492.820) * (-1538.830) [-1488.357] (-1553.685) (-1485.107) -- 0:03:41
Average standard deviation of split frequencies: 0.012407
651000 -- (-1537.266) [-1485.698] (-1495.559) (-1489.543) * (-1531.336) (-1487.177) (-1553.323) [-1479.132] -- 0:03:40
652000 -- (-1531.365) (-1488.031) (-1496.932) [-1490.200] * (-1539.616) (-1499.495) (-1559.288) [-1481.424] -- 0:03:40
653000 -- (-1549.492) (-1488.070) (-1485.452) [-1482.188] * (-1536.157) (-1494.911) (-1549.448) [-1480.311] -- 0:03:39
654000 -- (-1552.579) (-1476.668) (-1496.401) [-1481.483] * (-1532.628) (-1501.152) (-1556.538) [-1481.863] -- 0:03:39
655000 -- (-1534.372) (-1477.634) (-1496.160) [-1478.801] * (-1546.399) [-1491.246] (-1543.234) (-1481.774) -- 0:03:38
Average standard deviation of split frequencies: 0.011737
656000 -- (-1550.569) (-1491.162) [-1484.375] (-1491.023) * (-1546.596) (-1477.795) (-1549.192) [-1484.709] -- 0:03:37
657000 -- (-1531.967) (-1492.374) [-1492.734] (-1488.203) * (-1530.378) [-1476.800] (-1551.318) (-1489.118) -- 0:03:36
658000 -- (-1539.037) [-1483.007] (-1507.857) (-1496.188) * (-1537.901) [-1481.248] (-1552.952) (-1478.830) -- 0:03:36
659000 -- (-1535.631) (-1486.247) [-1487.477] (-1488.889) * (-1545.156) (-1482.419) (-1549.715) [-1483.403] -- 0:03:35
660000 -- (-1536.300) [-1491.478] (-1481.925) (-1504.863) * (-1549.826) [-1480.279] (-1551.096) (-1481.846) -- 0:03:34
Average standard deviation of split frequencies: 0.011892
661000 -- (-1542.200) (-1497.415) [-1474.420] (-1484.411) * (-1546.631) (-1477.862) (-1548.360) [-1480.336] -- 0:03:33
662000 -- (-1541.106) (-1478.660) [-1481.724] (-1478.137) * (-1539.367) [-1496.767] (-1556.048) (-1474.679) -- 0:03:33
663000 -- (-1541.885) (-1503.005) [-1479.274] (-1481.904) * (-1532.469) (-1478.954) (-1560.000) [-1476.808] -- 0:03:32
664000 -- (-1546.776) (-1496.355) [-1489.552] (-1492.457) * (-1530.648) (-1484.868) (-1554.617) [-1466.892] -- 0:03:32
665000 -- (-1531.784) [-1478.457] (-1491.050) (-1482.656) * (-1533.188) (-1487.957) (-1546.247) [-1473.242] -- 0:03:31
Average standard deviation of split frequencies: 0.011742
666000 -- (-1541.155) (-1503.429) (-1490.216) [-1481.186] * (-1539.385) (-1484.030) (-1559.085) [-1477.371] -- 0:03:30
667000 -- (-1544.544) (-1489.750) (-1485.588) [-1485.307] * (-1538.951) [-1480.232] (-1563.908) (-1487.565) -- 0:03:29
668000 -- (-1562.175) (-1489.597) (-1503.826) [-1482.297] * (-1543.356) [-1487.878] (-1556.622) (-1497.586) -- 0:03:28
669000 -- (-1534.775) [-1486.888] (-1503.034) (-1481.607) * (-1550.558) [-1482.559] (-1560.125) (-1495.609) -- 0:03:28
670000 -- (-1534.915) (-1481.968) (-1484.383) [-1483.503] * (-1552.623) (-1484.130) (-1555.388) [-1477.103] -- 0:03:27
Average standard deviation of split frequencies: 0.012292
671000 -- (-1547.469) (-1496.017) (-1486.566) [-1475.434] * (-1556.769) [-1475.023] (-1549.563) (-1474.259) -- 0:03:26
672000 -- (-1548.380) [-1490.398] (-1491.165) (-1481.104) * (-1534.774) (-1484.897) (-1552.772) [-1479.649] -- 0:03:25
673000 -- (-1548.466) [-1485.265] (-1500.269) (-1486.970) * (-1538.706) [-1480.863] (-1562.331) (-1486.198) -- 0:03:25
674000 -- (-1554.439) [-1488.706] (-1506.669) (-1485.182) * (-1545.070) [-1478.533] (-1540.700) (-1493.992) -- 0:03:24
675000 -- (-1539.357) (-1497.834) (-1514.165) [-1478.708] * (-1539.975) [-1480.966] (-1537.274) (-1486.722) -- 0:03:24
Average standard deviation of split frequencies: 0.012034
676000 -- (-1533.746) (-1491.166) [-1481.803] (-1493.774) * (-1533.564) (-1479.294) (-1550.610) [-1483.357] -- 0:03:23
677000 -- (-1549.741) (-1492.125) [-1472.378] (-1488.048) * (-1539.917) [-1494.833] (-1571.231) (-1488.705) -- 0:03:22
678000 -- (-1543.295) (-1498.582) [-1479.091] (-1495.079) * (-1539.624) (-1480.774) (-1560.106) [-1493.160] -- 0:03:21
679000 -- (-1529.368) [-1485.567] (-1477.700) (-1498.838) * (-1521.084) [-1479.831] (-1544.272) (-1486.077) -- 0:03:21
680000 -- (-1549.531) (-1501.459) [-1484.570] (-1483.108) * (-1533.320) [-1478.346] (-1550.324) (-1482.165) -- 0:03:20
Average standard deviation of split frequencies: 0.012065
681000 -- (-1552.073) (-1495.864) [-1480.310] (-1488.775) * (-1540.842) [-1469.699] (-1564.966) (-1487.860) -- 0:03:20
682000 -- (-1554.213) (-1497.920) (-1484.323) [-1496.283] * (-1534.504) (-1478.523) (-1565.949) [-1482.219] -- 0:03:19
683000 -- (-1552.437) (-1503.183) [-1487.127] (-1493.935) * (-1552.842) [-1488.712] (-1559.829) (-1478.050) -- 0:03:18
684000 -- (-1555.417) (-1498.002) (-1481.189) [-1483.704] * (-1545.215) (-1474.417) (-1554.882) [-1473.387] -- 0:03:17
685000 -- (-1551.721) (-1475.963) [-1481.423] (-1486.727) * (-1541.072) (-1480.448) (-1566.957) [-1474.103] -- 0:03:16
Average standard deviation of split frequencies: 0.011971
686000 -- (-1538.550) [-1476.295] (-1489.095) (-1485.173) * (-1533.458) (-1487.892) (-1555.516) [-1473.269] -- 0:03:16
687000 -- (-1537.530) [-1476.414] (-1492.055) (-1486.722) * (-1546.543) (-1485.060) (-1538.673) [-1474.212] -- 0:03:15
688000 -- (-1543.087) (-1491.402) (-1496.666) [-1485.003] * (-1547.824) (-1479.447) (-1561.606) [-1479.294] -- 0:03:15
689000 -- (-1554.908) (-1476.294) (-1496.969) [-1477.468] * (-1548.194) (-1497.696) (-1563.406) [-1480.037] -- 0:03:14
690000 -- (-1532.636) (-1490.100) [-1475.712] (-1503.810) * (-1548.810) (-1497.238) (-1572.300) [-1482.442] -- 0:03:13
Average standard deviation of split frequencies: 0.012142
691000 -- (-1540.711) (-1488.899) (-1495.064) [-1480.094] * (-1540.736) (-1486.397) (-1538.919) [-1477.769] -- 0:03:12
692000 -- (-1535.418) (-1485.858) (-1486.659) [-1480.295] * (-1532.224) (-1485.427) (-1545.954) [-1481.001] -- 0:03:12
693000 -- (-1548.943) (-1481.513) [-1479.546] (-1482.435) * (-1545.860) [-1475.443] (-1559.165) (-1482.186) -- 0:03:11
694000 -- (-1550.799) (-1502.077) [-1485.870] (-1477.551) * (-1527.035) [-1475.585] (-1581.105) (-1491.157) -- 0:03:10
695000 -- (-1547.850) (-1490.661) [-1489.993] (-1485.480) * (-1533.062) (-1479.456) (-1561.769) [-1488.056] -- 0:03:10
Average standard deviation of split frequencies: 0.012035
696000 -- (-1544.551) [-1487.812] (-1491.670) (-1510.985) * (-1522.697) (-1483.297) (-1566.407) [-1484.939] -- 0:03:09
697000 -- (-1551.718) [-1480.896] (-1476.552) (-1502.470) * (-1555.902) [-1490.356] (-1561.394) (-1486.602) -- 0:03:08
698000 -- (-1547.795) (-1483.684) [-1482.149] (-1497.904) * (-1534.878) [-1488.566] (-1574.097) (-1491.500) -- 0:03:08
699000 -- (-1549.566) [-1494.225] (-1498.893) (-1492.643) * (-1529.534) [-1481.283] (-1554.807) (-1486.602) -- 0:03:07
700000 -- (-1540.321) (-1490.875) (-1502.336) [-1477.446] * (-1536.866) (-1487.445) (-1552.866) [-1489.659] -- 0:03:06
Average standard deviation of split frequencies: 0.012197
701000 -- (-1535.462) [-1486.670] (-1492.725) (-1481.368) * (-1543.499) (-1481.028) (-1546.295) [-1480.796] -- 0:03:06
702000 -- (-1533.124) (-1485.757) (-1499.367) [-1477.666] * (-1539.424) [-1483.602] (-1556.102) (-1480.332) -- 0:03:05
703000 -- (-1547.506) [-1489.283] (-1492.613) (-1480.585) * (-1538.038) [-1474.829] (-1550.631) (-1481.321) -- 0:03:05
704000 -- (-1555.518) (-1484.714) (-1483.652) [-1478.489] * (-1542.999) [-1483.304] (-1556.233) (-1500.771) -- 0:03:04
705000 -- (-1530.693) (-1478.311) [-1486.493] (-1479.285) * (-1531.712) [-1486.432] (-1554.930) (-1500.734) -- 0:03:03
Average standard deviation of split frequencies: 0.011796
706000 -- (-1535.192) (-1479.518) (-1494.298) [-1480.072] * (-1533.357) (-1482.174) (-1559.186) [-1484.757] -- 0:03:02
707000 -- (-1540.781) [-1481.213] (-1491.326) (-1480.910) * (-1543.392) (-1484.977) (-1559.730) [-1484.154] -- 0:03:02
708000 -- (-1546.370) [-1484.443] (-1483.084) (-1483.510) * (-1539.791) [-1486.764] (-1557.613) (-1487.217) -- 0:03:01
709000 -- (-1544.913) (-1482.376) (-1481.758) [-1490.348] * (-1545.026) (-1483.201) (-1551.537) [-1473.603] -- 0:03:01
710000 -- (-1545.374) (-1496.032) [-1492.228] (-1491.130) * (-1545.996) [-1484.560] (-1550.482) (-1474.811) -- 0:03:00
Average standard deviation of split frequencies: 0.011050
711000 -- (-1557.632) [-1483.760] (-1498.339) (-1476.731) * (-1550.100) [-1485.454] (-1547.421) (-1488.384) -- 0:02:59
712000 -- (-1539.985) [-1487.473] (-1504.017) (-1476.969) * (-1556.981) (-1485.275) (-1549.071) [-1480.896] -- 0:02:59
713000 -- (-1552.905) (-1483.935) (-1500.330) [-1484.034] * (-1542.064) [-1478.903] (-1539.824) (-1472.967) -- 0:02:58
714000 -- (-1534.705) [-1478.567] (-1509.676) (-1495.073) * (-1540.638) (-1490.950) (-1549.765) [-1485.451] -- 0:02:58
715000 -- (-1538.796) [-1484.391] (-1482.928) (-1502.307) * (-1544.571) [-1480.824] (-1546.180) (-1491.412) -- 0:02:57
Average standard deviation of split frequencies: 0.010863
716000 -- (-1536.202) [-1486.232] (-1482.058) (-1491.378) * (-1538.950) (-1484.983) (-1552.523) [-1482.183] -- 0:02:56
717000 -- (-1528.144) (-1490.690) (-1477.334) [-1473.312] * (-1548.611) [-1479.758] (-1552.484) (-1476.418) -- 0:02:56
718000 -- (-1519.631) (-1491.140) [-1482.653] (-1481.188) * (-1544.117) (-1480.027) (-1552.872) [-1479.450] -- 0:02:55
719000 -- (-1531.777) [-1487.775] (-1489.537) (-1487.319) * (-1538.731) (-1486.258) (-1548.011) [-1479.502] -- 0:02:55
720000 -- (-1548.843) [-1485.650] (-1495.594) (-1504.980) * (-1540.153) (-1484.695) (-1542.810) [-1476.950] -- 0:02:54
Average standard deviation of split frequencies: 0.011170
721000 -- (-1540.808) (-1486.103) (-1496.214) [-1495.991] * (-1532.778) [-1479.167] (-1558.610) (-1478.430) -- 0:02:54
722000 -- (-1538.321) [-1471.572] (-1488.128) (-1495.361) * (-1545.223) [-1487.936] (-1550.651) (-1477.439) -- 0:02:53
723000 -- (-1549.936) [-1485.044] (-1477.543) (-1497.701) * (-1532.333) (-1499.394) (-1558.686) [-1477.038] -- 0:02:52
724000 -- (-1544.020) (-1490.633) (-1498.386) [-1480.347] * (-1530.577) [-1496.239] (-1560.518) (-1481.912) -- 0:02:52
725000 -- (-1553.059) [-1488.668] (-1482.833) (-1492.687) * (-1537.045) [-1496.957] (-1568.874) (-1489.817) -- 0:02:51
Average standard deviation of split frequencies: 0.011188
726000 -- (-1539.298) [-1482.393] (-1482.101) (-1484.494) * (-1539.474) (-1486.062) (-1561.062) [-1482.640] -- 0:02:50
727000 -- (-1544.809) (-1484.765) [-1484.513] (-1499.034) * (-1529.643) [-1486.527] (-1555.080) (-1474.910) -- 0:02:50
728000 -- (-1546.400) [-1486.900] (-1480.656) (-1490.121) * (-1537.943) [-1482.218] (-1558.215) (-1477.447) -- 0:02:50
729000 -- (-1536.313) (-1489.680) (-1491.963) [-1484.281] * (-1535.586) (-1484.859) (-1551.315) [-1481.759] -- 0:02:49
730000 -- (-1559.179) (-1482.580) [-1484.143] (-1483.658) * (-1554.081) [-1485.898] (-1559.769) (-1482.183) -- 0:02:48
Average standard deviation of split frequencies: 0.011107
731000 -- (-1546.204) [-1486.003] (-1488.689) (-1486.220) * (-1543.884) (-1489.379) (-1554.394) [-1482.204] -- 0:02:48
732000 -- (-1551.214) (-1494.235) (-1482.289) [-1486.376] * (-1542.231) (-1509.351) (-1583.085) [-1485.008] -- 0:02:47
733000 -- (-1536.911) [-1473.874] (-1484.517) (-1489.844) * (-1537.105) [-1482.844] (-1552.222) (-1478.520) -- 0:02:46
734000 -- (-1530.201) [-1476.031] (-1480.100) (-1481.003) * (-1546.064) (-1491.534) (-1559.945) [-1486.864] -- 0:02:46
735000 -- (-1538.710) (-1479.107) (-1486.959) [-1483.902] * (-1542.230) [-1491.944] (-1564.478) (-1474.956) -- 0:02:45
Average standard deviation of split frequencies: 0.010836
736000 -- (-1546.119) (-1480.332) [-1477.928] (-1490.049) * (-1537.280) (-1485.795) (-1549.023) [-1474.935] -- 0:02:45
737000 -- (-1563.616) [-1477.368] (-1480.521) (-1485.987) * (-1545.629) (-1480.771) (-1551.551) [-1474.054] -- 0:02:44
738000 -- (-1548.906) (-1483.803) [-1476.179] (-1479.785) * (-1530.950) (-1473.964) (-1556.890) [-1483.700] -- 0:02:44
739000 -- (-1542.522) (-1487.671) (-1484.595) [-1481.710] * (-1543.634) [-1477.213] (-1568.374) (-1490.233) -- 0:02:43
740000 -- (-1535.642) (-1478.335) (-1495.536) [-1477.453] * (-1537.642) (-1494.091) (-1551.577) [-1481.233] -- 0:02:42
Average standard deviation of split frequencies: 0.010803
741000 -- (-1537.440) (-1497.936) (-1480.151) [-1481.310] * (-1537.591) [-1492.423] (-1561.231) (-1481.589) -- 0:02:42
742000 -- (-1544.543) (-1497.204) (-1477.261) [-1483.791] * (-1538.944) (-1490.195) (-1556.886) [-1490.896] -- 0:02:41
743000 -- (-1538.700) (-1492.326) [-1479.354] (-1489.785) * (-1545.329) (-1482.554) (-1563.166) [-1480.535] -- 0:02:41
744000 -- (-1542.177) (-1496.433) [-1477.997] (-1494.177) * (-1543.179) (-1490.118) (-1549.562) [-1498.544] -- 0:02:40
745000 -- (-1529.605) (-1490.988) [-1476.848] (-1498.423) * (-1533.659) [-1478.572] (-1556.642) (-1500.992) -- 0:02:39
Average standard deviation of split frequencies: 0.010862
746000 -- (-1541.055) (-1482.210) [-1484.454] (-1505.069) * (-1543.957) [-1470.934] (-1554.649) (-1496.061) -- 0:02:39
747000 -- (-1536.605) (-1476.909) [-1483.538] (-1489.190) * (-1541.990) (-1482.413) (-1555.936) [-1481.201] -- 0:02:38
748000 -- (-1531.660) [-1480.134] (-1493.424) (-1509.521) * (-1539.548) (-1489.171) (-1546.358) [-1477.924] -- 0:02:38
749000 -- (-1538.868) [-1474.807] (-1500.219) (-1500.730) * (-1545.540) (-1495.430) (-1541.669) [-1475.727] -- 0:02:37
750000 -- (-1553.063) [-1474.132] (-1507.353) (-1479.210) * (-1543.937) (-1479.291) (-1532.953) [-1478.965] -- 0:02:37
Average standard deviation of split frequencies: 0.010659
751000 -- (-1536.192) [-1481.329] (-1492.263) (-1492.000) * (-1527.698) (-1483.946) (-1549.289) [-1478.602] -- 0:02:36
752000 -- (-1551.531) [-1486.448] (-1488.792) (-1491.254) * (-1538.110) [-1477.543] (-1555.833) (-1490.899) -- 0:02:35
753000 -- (-1545.074) (-1479.359) [-1481.303] (-1485.395) * (-1537.564) (-1477.867) (-1560.567) [-1493.988] -- 0:02:35
754000 -- (-1546.835) [-1476.605] (-1474.400) (-1485.032) * (-1536.199) [-1478.045] (-1549.639) (-1484.439) -- 0:02:34
755000 -- (-1548.311) (-1485.100) (-1480.397) [-1479.716] * (-1546.623) (-1479.120) (-1555.203) [-1484.367] -- 0:02:33
Average standard deviation of split frequencies: 0.010354
756000 -- (-1547.447) (-1490.893) [-1480.540] (-1485.270) * (-1547.666) (-1480.464) (-1555.075) [-1470.759] -- 0:02:33
757000 -- (-1520.329) [-1481.935] (-1487.439) (-1487.969) * (-1541.652) (-1486.163) (-1577.444) [-1473.437] -- 0:02:32
758000 -- (-1542.043) (-1488.950) [-1478.207] (-1478.662) * (-1532.505) (-1479.205) (-1557.206) [-1469.868] -- 0:02:31
759000 -- (-1536.547) (-1477.960) [-1482.962] (-1487.152) * (-1550.818) (-1492.336) (-1545.499) [-1480.951] -- 0:02:31
760000 -- (-1540.498) (-1494.614) [-1482.320] (-1486.975) * (-1558.395) [-1472.050] (-1546.878) (-1494.983) -- 0:02:30
Average standard deviation of split frequencies: 0.009981
761000 -- (-1547.359) (-1483.015) (-1498.142) [-1473.348] * (-1547.927) [-1478.316] (-1559.049) (-1490.612) -- 0:02:30
762000 -- (-1544.220) [-1487.191] (-1488.047) (-1481.513) * (-1537.100) (-1477.052) (-1552.033) [-1485.587] -- 0:02:29
763000 -- (-1544.578) [-1477.816] (-1489.413) (-1492.459) * (-1548.542) (-1489.938) (-1556.629) [-1484.966] -- 0:02:29
764000 -- (-1537.981) [-1487.082] (-1492.245) (-1490.842) * (-1541.942) [-1476.219] (-1556.059) (-1496.034) -- 0:02:28
765000 -- (-1541.107) [-1487.931] (-1500.809) (-1478.566) * (-1547.128) [-1472.596] (-1558.114) (-1490.493) -- 0:02:27
Average standard deviation of split frequencies: 0.009944
766000 -- (-1540.091) (-1495.725) (-1497.945) [-1478.819] * (-1531.306) [-1472.087] (-1567.063) (-1485.010) -- 0:02:27
767000 -- (-1564.116) (-1478.999) (-1485.410) [-1475.756] * (-1530.218) [-1480.217] (-1578.787) (-1482.176) -- 0:02:26
768000 -- (-1559.312) (-1479.078) (-1481.803) [-1476.468] * (-1539.620) [-1483.949] (-1574.988) (-1484.820) -- 0:02:26
769000 -- (-1541.426) (-1486.530) [-1483.378] (-1496.586) * (-1531.121) [-1481.489] (-1565.248) (-1479.538) -- 0:02:25
770000 -- (-1545.887) [-1483.109] (-1492.540) (-1494.042) * (-1525.985) [-1484.516] (-1544.625) (-1472.526) -- 0:02:24
Average standard deviation of split frequencies: 0.009787
771000 -- (-1526.937) (-1507.759) (-1482.473) [-1475.239] * (-1536.681) (-1482.844) (-1569.356) [-1474.753] -- 0:02:24
772000 -- (-1541.385) (-1491.315) [-1485.081] (-1474.168) * (-1537.759) [-1474.939] (-1566.641) (-1479.970) -- 0:02:23
773000 -- (-1548.185) (-1487.911) [-1475.763] (-1483.595) * (-1529.477) (-1490.074) (-1550.977) [-1480.693] -- 0:02:23
774000 -- (-1546.741) (-1482.123) [-1476.969] (-1482.511) * (-1545.690) [-1478.368] (-1547.854) (-1485.549) -- 0:02:22
775000 -- (-1546.716) (-1487.359) [-1481.111] (-1493.407) * (-1547.680) (-1489.764) (-1560.269) [-1483.779] -- 0:02:21
Average standard deviation of split frequencies: 0.010097
776000 -- (-1553.008) [-1479.877] (-1495.536) (-1485.878) * (-1535.659) (-1493.989) (-1548.222) [-1486.525] -- 0:02:20
777000 -- (-1555.342) [-1488.051] (-1499.926) (-1485.016) * (-1556.357) (-1494.668) (-1548.531) [-1482.354] -- 0:02:20
778000 -- (-1546.825) (-1487.363) [-1485.551] (-1480.575) * (-1548.165) (-1486.321) (-1554.085) [-1477.208] -- 0:02:19
779000 -- (-1552.357) (-1487.724) (-1498.777) [-1477.467] * (-1540.895) [-1494.690] (-1558.482) (-1491.221) -- 0:02:19
780000 -- (-1547.604) (-1484.085) (-1508.402) [-1484.748] * (-1535.807) [-1490.958] (-1565.865) (-1480.880) -- 0:02:18
Average standard deviation of split frequencies: 0.009948
781000 -- (-1537.129) (-1480.636) (-1506.445) [-1490.985] * (-1543.840) [-1478.658] (-1545.663) (-1492.071) -- 0:02:17
782000 -- (-1551.539) [-1478.610] (-1502.898) (-1481.892) * (-1531.681) (-1490.436) (-1549.060) [-1472.029] -- 0:02:16
783000 -- (-1540.760) [-1491.855] (-1486.628) (-1483.979) * (-1531.808) [-1486.510] (-1550.763) (-1482.929) -- 0:02:16
784000 -- (-1549.727) (-1477.236) [-1477.388] (-1503.296) * (-1546.165) (-1500.993) (-1554.513) [-1484.037] -- 0:02:15
785000 -- (-1542.723) (-1488.112) (-1478.961) [-1484.100] * (-1537.773) (-1486.384) (-1558.271) [-1480.819] -- 0:02:15
Average standard deviation of split frequencies: 0.009564
786000 -- (-1540.989) [-1474.917] (-1495.291) (-1491.771) * (-1531.083) (-1501.640) (-1545.410) [-1486.352] -- 0:02:14
787000 -- (-1537.993) [-1480.156] (-1497.173) (-1511.440) * (-1533.596) (-1487.938) (-1553.934) [-1479.982] -- 0:02:13
788000 -- (-1560.921) [-1480.663] (-1494.624) (-1515.335) * (-1529.692) (-1479.027) (-1556.972) [-1484.040] -- 0:02:13
789000 -- (-1553.855) [-1485.126] (-1479.101) (-1495.061) * (-1551.038) [-1493.278] (-1539.663) (-1483.838) -- 0:02:12
790000 -- (-1537.268) (-1491.868) (-1500.255) [-1484.166] * (-1552.285) (-1490.629) (-1541.630) [-1479.697] -- 0:02:12
Average standard deviation of split frequencies: 0.009100
791000 -- (-1543.781) [-1487.743] (-1506.594) (-1488.300) * (-1542.576) [-1492.289] (-1550.281) (-1487.493) -- 0:02:11
792000 -- (-1546.361) (-1492.339) (-1496.993) [-1493.793] * (-1540.297) [-1489.511] (-1544.792) (-1479.331) -- 0:02:10
793000 -- (-1536.651) (-1494.709) [-1484.583] (-1481.957) * (-1548.244) (-1485.330) (-1549.490) [-1473.356] -- 0:02:10
794000 -- (-1534.784) (-1491.106) [-1493.484] (-1486.496) * (-1524.647) [-1483.841] (-1545.547) (-1478.767) -- 0:02:09
795000 -- (-1547.028) [-1473.608] (-1493.450) (-1485.276) * (-1527.060) (-1482.722) (-1543.626) [-1477.257] -- 0:02:08
Average standard deviation of split frequencies: 0.008931
796000 -- (-1534.797) [-1479.072] (-1492.830) (-1483.146) * (-1537.300) (-1488.604) (-1556.338) [-1476.772] -- 0:02:08
797000 -- (-1537.153) [-1475.110] (-1511.567) (-1490.606) * (-1528.178) (-1489.025) (-1552.843) [-1479.364] -- 0:02:07
798000 -- (-1536.792) [-1473.553] (-1494.562) (-1486.571) * (-1533.734) [-1484.511] (-1553.067) (-1485.496) -- 0:02:07
799000 -- (-1545.773) [-1480.971] (-1493.444) (-1485.121) * (-1531.915) [-1476.735] (-1559.343) (-1474.460) -- 0:02:06
800000 -- (-1538.654) (-1498.060) (-1488.469) [-1478.306] * (-1532.028) (-1487.759) (-1549.982) [-1473.485] -- 0:02:06
Average standard deviation of split frequencies: 0.008752
801000 -- (-1540.584) (-1489.885) (-1499.257) [-1473.836] * (-1542.231) (-1492.557) (-1549.034) [-1475.514] -- 0:02:05
802000 -- (-1547.805) (-1481.462) [-1488.146] (-1493.809) * (-1528.917) (-1486.100) (-1547.459) [-1472.450] -- 0:02:04
803000 -- (-1549.427) [-1491.608] (-1488.760) (-1503.193) * (-1526.511) (-1495.988) (-1558.537) [-1483.188] -- 0:02:04
804000 -- (-1552.374) [-1488.456] (-1491.538) (-1503.171) * (-1531.814) (-1500.093) (-1565.605) [-1483.924] -- 0:02:03
805000 -- (-1551.741) (-1495.513) [-1475.538] (-1497.384) * (-1541.719) (-1505.379) (-1560.213) [-1486.316] -- 0:02:03
Average standard deviation of split frequencies: 0.008805
806000 -- (-1549.777) (-1484.336) [-1476.488] (-1496.009) * (-1543.232) (-1512.890) (-1564.984) [-1479.321] -- 0:02:02
807000 -- (-1554.271) (-1479.300) [-1480.694] (-1497.738) * (-1538.704) (-1483.527) (-1548.702) [-1481.861] -- 0:02:01
808000 -- (-1552.734) [-1474.699] (-1492.054) (-1492.163) * (-1544.411) (-1479.732) (-1554.176) [-1476.125] -- 0:02:01
809000 -- (-1551.661) [-1482.828] (-1489.184) (-1482.277) * (-1534.963) (-1489.349) (-1557.974) [-1484.151] -- 0:02:00
810000 -- (-1553.709) [-1476.964] (-1484.917) (-1484.874) * (-1545.055) (-1486.938) (-1560.115) [-1489.827] -- 0:01:59
Average standard deviation of split frequencies: 0.008770
811000 -- (-1552.047) [-1476.238] (-1485.644) (-1485.198) * (-1535.769) [-1471.139] (-1553.645) (-1488.671) -- 0:01:59
812000 -- (-1542.199) [-1475.373] (-1494.213) (-1494.679) * (-1535.122) (-1484.856) (-1540.151) [-1484.808] -- 0:01:58
813000 -- (-1524.457) [-1478.856] (-1490.565) (-1478.897) * (-1549.059) [-1482.501] (-1564.951) (-1477.201) -- 0:01:57
814000 -- (-1533.564) [-1474.261] (-1486.149) (-1484.444) * (-1527.113) (-1481.967) (-1563.980) [-1478.019] -- 0:01:57
815000 -- (-1536.895) (-1476.444) (-1489.457) [-1479.763] * (-1550.153) (-1481.313) (-1560.869) [-1476.470] -- 0:01:56
Average standard deviation of split frequencies: 0.008728
816000 -- (-1536.945) [-1475.516] (-1509.416) (-1486.414) * (-1539.240) (-1485.870) (-1556.757) [-1495.931] -- 0:01:56
817000 -- (-1540.949) [-1482.541] (-1516.250) (-1487.931) * (-1549.255) (-1486.624) (-1558.751) [-1481.780] -- 0:01:55
818000 -- (-1532.716) [-1472.354] (-1490.609) (-1485.423) * (-1532.741) [-1494.977] (-1552.272) (-1485.153) -- 0:01:55
819000 -- (-1540.714) [-1479.056] (-1477.232) (-1484.745) * (-1540.067) (-1490.125) (-1570.109) [-1477.699] -- 0:01:54
820000 -- (-1548.883) [-1483.790] (-1483.764) (-1503.251) * (-1540.053) (-1493.487) (-1549.929) [-1479.825] -- 0:01:53
Average standard deviation of split frequencies: 0.008321
821000 -- (-1541.021) (-1487.058) [-1475.751] (-1477.238) * (-1544.213) (-1493.953) (-1552.702) [-1482.715] -- 0:01:53
822000 -- (-1556.654) (-1482.949) (-1475.800) [-1473.623] * (-1559.474) (-1483.139) (-1555.369) [-1476.928] -- 0:01:52
823000 -- (-1540.820) (-1480.470) [-1480.101] (-1484.355) * (-1545.169) (-1482.957) (-1552.613) [-1487.385] -- 0:01:51
824000 -- (-1531.840) [-1475.599] (-1496.513) (-1494.251) * (-1533.780) [-1485.830] (-1552.233) (-1475.696) -- 0:01:51
825000 -- (-1526.631) [-1474.467] (-1493.738) (-1485.328) * (-1526.848) (-1481.484) (-1573.921) [-1471.491] -- 0:01:50
Average standard deviation of split frequencies: 0.008730
826000 -- (-1520.508) (-1482.567) (-1490.660) [-1492.252] * (-1523.968) [-1483.409] (-1560.225) (-1493.673) -- 0:01:49
827000 -- (-1539.561) (-1480.430) (-1503.562) [-1485.783] * (-1542.104) [-1482.739] (-1558.842) (-1483.856) -- 0:01:49
828000 -- (-1546.023) (-1482.533) (-1494.971) [-1473.849] * (-1543.501) (-1493.794) (-1551.127) [-1489.299] -- 0:01:48
829000 -- (-1535.749) [-1477.169] (-1504.489) (-1480.724) * (-1537.739) (-1495.009) (-1554.047) [-1492.853] -- 0:01:48
830000 -- (-1548.720) [-1485.025] (-1490.136) (-1480.738) * (-1545.291) (-1508.071) (-1550.522) [-1482.875] -- 0:01:47
Average standard deviation of split frequencies: 0.008513
831000 -- (-1557.693) (-1494.210) [-1479.165] (-1488.133) * (-1528.897) (-1495.894) (-1563.478) [-1481.890] -- 0:01:46
832000 -- (-1533.555) (-1507.548) (-1488.357) [-1480.329] * (-1519.339) [-1488.426] (-1552.607) (-1492.355) -- 0:01:46
833000 -- (-1540.075) (-1479.018) (-1489.846) [-1482.277] * (-1528.626) (-1488.390) (-1574.135) [-1482.588] -- 0:01:45
834000 -- (-1535.899) (-1512.772) (-1486.445) [-1476.101] * (-1533.819) [-1485.650] (-1559.880) (-1487.096) -- 0:01:45
835000 -- (-1552.835) (-1499.271) (-1498.946) [-1473.308] * (-1546.137) [-1480.043] (-1550.557) (-1504.455) -- 0:01:44
Average standard deviation of split frequencies: 0.008306
836000 -- (-1533.182) (-1476.738) [-1479.025] (-1481.954) * (-1540.030) (-1485.135) (-1558.287) [-1484.043] -- 0:01:43
837000 -- (-1543.917) (-1484.238) [-1480.685] (-1478.464) * (-1547.098) [-1471.157] (-1548.865) (-1490.061) -- 0:01:43
838000 -- (-1543.469) [-1477.183] (-1479.234) (-1499.777) * (-1548.503) [-1490.215] (-1553.255) (-1496.755) -- 0:01:42
839000 -- (-1533.915) (-1497.218) [-1479.158] (-1494.096) * (-1534.888) [-1481.382] (-1546.148) (-1483.863) -- 0:01:41
840000 -- (-1556.111) (-1486.732) [-1478.340] (-1493.863) * (-1549.925) (-1487.703) (-1549.629) [-1484.550] -- 0:01:41
Average standard deviation of split frequencies: 0.008290
841000 -- (-1547.450) (-1497.612) [-1482.313] (-1495.373) * (-1549.756) (-1489.869) (-1552.511) [-1492.399] -- 0:01:40
842000 -- (-1536.762) (-1480.123) [-1482.558] (-1500.689) * (-1533.855) (-1491.185) (-1552.852) [-1487.477] -- 0:01:39
843000 -- (-1538.803) (-1476.365) [-1476.959] (-1504.330) * (-1553.678) [-1485.126] (-1548.562) (-1486.552) -- 0:01:39
844000 -- (-1543.682) [-1471.378] (-1483.576) (-1508.560) * (-1531.689) [-1487.670] (-1573.252) (-1485.534) -- 0:01:38
845000 -- (-1546.592) (-1489.758) [-1474.357] (-1495.673) * (-1532.346) [-1476.024] (-1564.374) (-1489.086) -- 0:01:37
Average standard deviation of split frequencies: 0.008042
846000 -- (-1556.874) (-1490.158) [-1477.614] (-1495.298) * (-1546.001) [-1480.576] (-1556.088) (-1481.566) -- 0:01:37
847000 -- (-1543.944) (-1489.357) (-1486.889) [-1480.428] * (-1546.194) [-1484.428] (-1560.132) (-1478.537) -- 0:01:36
848000 -- (-1531.892) (-1486.497) [-1487.297] (-1481.451) * (-1548.393) (-1488.168) (-1542.046) [-1484.764] -- 0:01:35
849000 -- (-1548.831) (-1487.502) (-1490.967) [-1484.098] * (-1536.719) (-1481.731) (-1564.330) [-1483.319] -- 0:01:35
850000 -- (-1545.501) (-1488.250) [-1496.522] (-1479.926) * (-1548.066) [-1477.579] (-1560.150) (-1494.870) -- 0:01:34
Average standard deviation of split frequencies: 0.007968
851000 -- (-1541.407) (-1477.061) [-1488.574] (-1490.017) * (-1543.596) (-1487.050) (-1547.933) [-1502.333] -- 0:01:33
852000 -- (-1539.680) [-1481.226] (-1495.053) (-1495.472) * (-1534.364) [-1482.184] (-1561.589) (-1485.107) -- 0:01:33
853000 -- (-1544.393) (-1475.535) (-1497.779) [-1483.797] * (-1540.177) [-1483.520] (-1553.554) (-1488.942) -- 0:01:32
854000 -- (-1544.317) (-1493.980) (-1491.843) [-1490.191] * (-1540.161) (-1493.883) (-1560.724) [-1477.965] -- 0:01:31
855000 -- (-1545.843) (-1480.529) [-1483.895] (-1495.037) * (-1569.826) (-1494.247) (-1564.276) [-1479.199] -- 0:01:31
Average standard deviation of split frequencies: 0.007710
856000 -- (-1565.810) [-1484.991] (-1496.914) (-1492.737) * (-1547.522) (-1485.934) (-1549.341) [-1476.546] -- 0:01:30
857000 -- (-1541.482) [-1479.617] (-1488.011) (-1501.210) * (-1547.914) [-1487.292] (-1561.887) (-1481.443) -- 0:01:30
858000 -- (-1544.301) [-1476.995] (-1487.509) (-1504.413) * (-1530.540) (-1489.605) (-1553.384) [-1476.107] -- 0:01:29
859000 -- (-1536.561) (-1482.429) (-1479.426) [-1491.793] * (-1547.026) [-1485.801] (-1551.589) (-1484.413) -- 0:01:28
860000 -- (-1542.927) (-1490.920) [-1485.603] (-1483.248) * (-1537.026) (-1494.307) (-1552.012) [-1488.220] -- 0:01:28
Average standard deviation of split frequencies: 0.007653
861000 -- (-1535.968) (-1490.097) (-1501.279) [-1485.546] * (-1540.021) (-1497.496) (-1558.259) [-1475.318] -- 0:01:27
862000 -- (-1533.320) (-1493.534) (-1503.235) [-1479.869] * (-1548.340) (-1490.402) (-1571.862) [-1479.434] -- 0:01:26
863000 -- (-1531.858) (-1492.640) (-1492.797) [-1482.167] * (-1548.756) (-1483.997) (-1562.126) [-1481.406] -- 0:01:26
864000 -- (-1533.731) (-1475.166) (-1497.920) [-1484.551] * (-1546.063) (-1482.119) (-1569.211) [-1483.918] -- 0:01:25
865000 -- (-1532.130) [-1485.182] (-1488.164) (-1492.310) * (-1547.323) [-1475.890] (-1560.716) (-1482.504) -- 0:01:25
Average standard deviation of split frequencies: 0.007179
866000 -- (-1549.123) (-1480.836) [-1474.667] (-1479.706) * (-1541.123) [-1472.347] (-1557.833) (-1488.600) -- 0:01:24
867000 -- (-1540.716) [-1473.825] (-1483.443) (-1483.477) * (-1541.136) [-1474.096] (-1561.653) (-1483.442) -- 0:01:23
868000 -- (-1547.259) (-1471.794) [-1477.642] (-1479.025) * (-1526.412) (-1492.756) (-1540.147) [-1468.964] -- 0:01:23
869000 -- (-1524.845) [-1479.890] (-1486.381) (-1494.185) * (-1541.074) (-1474.806) (-1555.304) [-1473.082] -- 0:01:22
870000 -- (-1536.860) [-1474.165] (-1487.842) (-1485.525) * (-1552.839) (-1481.452) (-1561.335) [-1475.624] -- 0:01:21
Average standard deviation of split frequencies: 0.007390
871000 -- (-1546.546) [-1479.262] (-1493.062) (-1497.275) * (-1549.096) [-1471.203] (-1548.848) (-1472.699) -- 0:01:21
872000 -- (-1539.537) (-1475.073) (-1496.194) [-1479.677] * (-1537.785) [-1471.156] (-1542.943) (-1486.207) -- 0:01:20
873000 -- (-1544.068) [-1476.806] (-1486.812) (-1486.409) * (-1541.262) [-1475.468] (-1556.829) (-1485.239) -- 0:01:19
874000 -- (-1537.623) [-1481.524] (-1486.764) (-1490.666) * (-1546.866) [-1478.861] (-1554.952) (-1494.332) -- 0:01:19
875000 -- (-1536.814) (-1482.890) [-1478.324] (-1482.720) * (-1548.522) [-1481.413] (-1551.997) (-1491.034) -- 0:01:18
Average standard deviation of split frequencies: 0.007505
876000 -- (-1534.210) (-1485.177) [-1467.928] (-1476.189) * (-1537.526) [-1481.016] (-1567.644) (-1485.371) -- 0:01:17
877000 -- (-1552.632) (-1487.389) [-1470.695] (-1473.726) * (-1541.155) [-1479.206] (-1554.799) (-1482.163) -- 0:01:17
878000 -- (-1543.790) (-1487.725) (-1484.515) [-1478.896] * (-1532.289) [-1485.695] (-1558.042) (-1479.704) -- 0:01:16
879000 -- (-1541.248) (-1491.770) [-1480.384] (-1493.083) * (-1539.585) [-1488.236] (-1559.132) (-1488.851) -- 0:01:15
880000 -- (-1535.472) (-1490.291) (-1482.410) [-1494.071] * (-1540.792) (-1495.031) (-1568.525) [-1487.293] -- 0:01:15
Average standard deviation of split frequencies: 0.007107
881000 -- (-1541.937) (-1484.733) (-1487.907) [-1479.182] * (-1555.896) [-1492.139] (-1542.098) (-1497.897) -- 0:01:14
882000 -- (-1517.862) (-1497.450) (-1486.155) [-1483.187] * (-1534.840) [-1490.037] (-1569.185) (-1490.714) -- 0:01:13
883000 -- (-1539.673) [-1492.317] (-1485.563) (-1498.408) * (-1524.807) (-1499.365) (-1552.642) [-1480.317] -- 0:01:13
884000 -- (-1548.722) [-1491.236] (-1480.322) (-1484.141) * (-1525.007) [-1475.348] (-1577.446) (-1480.279) -- 0:01:12
885000 -- (-1535.665) (-1486.668) [-1475.440] (-1488.219) * (-1523.204) (-1477.345) (-1557.121) [-1477.212] -- 0:01:12
Average standard deviation of split frequencies: 0.006960
886000 -- (-1534.449) [-1490.541] (-1482.347) (-1480.170) * (-1542.611) [-1473.316] (-1550.738) (-1480.579) -- 0:01:11
887000 -- (-1539.106) [-1479.373] (-1488.143) (-1495.359) * (-1532.265) [-1487.830] (-1556.888) (-1481.899) -- 0:01:10
888000 -- (-1529.207) [-1481.118] (-1487.491) (-1510.051) * (-1539.700) (-1484.882) (-1557.625) [-1477.559] -- 0:01:10
889000 -- (-1523.959) [-1475.214] (-1496.231) (-1518.470) * (-1531.408) (-1481.270) (-1541.989) [-1473.076] -- 0:01:09
890000 -- (-1530.505) [-1481.716] (-1494.926) (-1490.674) * (-1540.572) [-1486.278] (-1546.799) (-1477.482) -- 0:01:08
Average standard deviation of split frequencies: 0.006797
891000 -- (-1536.779) [-1485.552] (-1490.278) (-1504.144) * (-1528.962) [-1481.220] (-1552.247) (-1498.533) -- 0:01:08
892000 -- (-1545.146) (-1481.859) (-1490.714) [-1473.353] * (-1531.162) (-1485.664) (-1549.814) [-1484.883] -- 0:01:07
893000 -- (-1541.905) [-1480.031] (-1481.801) (-1482.547) * (-1539.024) [-1483.303] (-1559.177) (-1482.332) -- 0:01:07
894000 -- (-1543.677) (-1487.207) [-1475.534] (-1482.503) * (-1539.818) [-1473.061] (-1553.795) (-1503.072) -- 0:01:06
895000 -- (-1549.217) [-1480.257] (-1475.426) (-1492.797) * (-1547.388) [-1481.449] (-1546.346) (-1490.984) -- 0:01:05
Average standard deviation of split frequencies: 0.006669
896000 -- (-1532.091) (-1481.133) (-1485.876) [-1475.028] * (-1545.500) [-1488.745] (-1565.880) (-1487.175) -- 0:01:05
897000 -- (-1537.374) [-1487.490] (-1493.684) (-1485.470) * (-1544.880) (-1486.155) (-1563.557) [-1479.563] -- 0:01:04
898000 -- (-1538.791) (-1478.035) (-1499.404) [-1476.561] * (-1544.765) (-1476.673) (-1561.779) [-1487.847] -- 0:01:04
899000 -- (-1569.596) [-1478.300] (-1503.539) (-1484.229) * (-1552.636) (-1482.354) (-1562.788) [-1486.912] -- 0:01:03
900000 -- (-1544.998) [-1477.214] (-1497.651) (-1486.583) * (-1552.524) [-1495.818] (-1560.652) (-1482.577) -- 0:01:02
Average standard deviation of split frequencies: 0.006479
901000 -- (-1534.397) [-1481.459] (-1508.895) (-1483.651) * (-1555.727) (-1483.609) (-1558.002) [-1480.591] -- 0:01:02
902000 -- (-1543.380) (-1487.748) (-1498.648) [-1478.597] * (-1536.587) [-1479.334] (-1564.298) (-1494.189) -- 0:01:01
903000 -- (-1551.864) (-1490.642) (-1485.083) [-1487.238] * (-1534.432) (-1488.631) (-1545.259) [-1481.333] -- 0:01:01
904000 -- (-1546.853) (-1493.717) (-1499.264) [-1480.742] * (-1553.458) [-1482.828] (-1551.196) (-1489.971) -- 0:01:00
905000 -- (-1530.159) [-1476.802] (-1489.356) (-1480.667) * (-1545.038) [-1477.428] (-1553.295) (-1491.111) -- 0:00:59
Average standard deviation of split frequencies: 0.006627
906000 -- (-1531.442) (-1483.573) (-1496.042) [-1476.066] * (-1537.212) [-1475.601] (-1543.598) (-1488.964) -- 0:00:59
907000 -- (-1537.181) (-1488.712) (-1490.960) [-1476.793] * (-1529.522) (-1487.187) (-1553.615) [-1488.464] -- 0:00:58
908000 -- (-1547.283) [-1478.279] (-1506.745) (-1484.012) * (-1533.743) (-1481.536) (-1544.893) [-1485.629] -- 0:00:57
909000 -- (-1552.202) (-1486.455) [-1488.435] (-1490.039) * (-1547.269) [-1477.737] (-1549.034) (-1491.328) -- 0:00:57
910000 -- (-1543.024) (-1485.902) [-1479.445] (-1475.061) * (-1556.906) [-1479.718] (-1550.584) (-1498.985) -- 0:00:56
Average standard deviation of split frequencies: 0.006798
911000 -- (-1547.780) [-1477.766] (-1500.701) (-1510.669) * (-1548.172) (-1486.799) (-1542.415) [-1491.251] -- 0:00:55
912000 -- (-1536.984) (-1479.731) (-1498.870) [-1485.029] * (-1529.505) (-1486.310) (-1547.801) [-1479.263] -- 0:00:55
913000 -- (-1549.977) [-1486.021] (-1483.960) (-1479.569) * (-1537.667) (-1486.316) (-1546.761) [-1492.858] -- 0:00:54
914000 -- (-1533.466) (-1494.088) (-1495.842) [-1481.992] * (-1542.199) (-1486.294) (-1554.558) [-1481.333] -- 0:00:53
915000 -- (-1538.640) (-1502.339) [-1489.864] (-1478.907) * (-1536.112) (-1479.418) (-1551.411) [-1490.512] -- 0:00:53
Average standard deviation of split frequencies: 0.007015
916000 -- (-1536.502) (-1501.042) (-1482.431) [-1481.341] * (-1535.426) [-1481.491] (-1540.074) (-1489.711) -- 0:00:52
917000 -- (-1539.882) (-1514.314) [-1478.404] (-1480.967) * (-1527.337) [-1490.219] (-1535.917) (-1507.130) -- 0:00:52
918000 -- (-1548.092) (-1500.307) (-1479.155) [-1486.007] * (-1533.805) (-1481.950) (-1554.711) [-1493.808] -- 0:00:51
919000 -- (-1551.840) (-1480.229) [-1486.492] (-1492.731) * (-1547.417) (-1476.768) (-1548.644) [-1480.568] -- 0:00:50
920000 -- (-1542.292) (-1498.707) [-1477.930] (-1490.827) * (-1545.389) [-1480.123] (-1546.466) (-1481.385) -- 0:00:50
Average standard deviation of split frequencies: 0.006872
921000 -- (-1537.852) (-1500.722) [-1481.459] (-1487.875) * (-1536.905) (-1485.497) (-1547.749) [-1483.024] -- 0:00:49
922000 -- (-1561.530) (-1490.434) [-1475.785] (-1498.409) * (-1542.688) [-1482.029] (-1546.280) (-1477.917) -- 0:00:48
923000 -- (-1546.140) [-1474.487] (-1486.003) (-1495.955) * (-1528.532) [-1479.425] (-1558.842) (-1479.671) -- 0:00:48
924000 -- (-1553.644) [-1475.051] (-1484.285) (-1488.537) * (-1545.820) [-1479.793] (-1564.631) (-1487.189) -- 0:00:47
925000 -- (-1543.558) (-1488.392) [-1486.926] (-1505.883) * (-1521.789) [-1499.677] (-1561.717) (-1488.784) -- 0:00:46
Average standard deviation of split frequencies: 0.006966
926000 -- (-1542.341) (-1479.119) (-1504.275) [-1477.920] * (-1521.651) (-1483.841) (-1561.932) [-1486.305] -- 0:00:46
927000 -- (-1547.458) (-1476.510) (-1486.732) [-1489.050] * (-1522.170) (-1482.052) (-1554.315) [-1480.309] -- 0:00:45
928000 -- (-1541.105) (-1480.478) [-1483.802] (-1489.317) * (-1526.259) [-1493.111] (-1551.829) (-1490.644) -- 0:00:45
929000 -- (-1540.269) [-1481.199] (-1486.690) (-1479.445) * (-1540.123) (-1484.167) (-1555.875) [-1489.479] -- 0:00:44
930000 -- (-1531.968) (-1483.063) (-1485.483) [-1470.780] * (-1550.996) [-1479.852] (-1544.361) (-1491.453) -- 0:00:43
Average standard deviation of split frequencies: 0.007171
931000 -- (-1550.862) (-1491.816) [-1485.786] (-1486.005) * (-1536.548) [-1483.138] (-1562.720) (-1479.073) -- 0:00:43
932000 -- (-1556.049) (-1490.196) (-1476.497) [-1477.051] * (-1537.252) (-1485.059) (-1552.214) [-1482.049] -- 0:00:42
933000 -- (-1533.381) (-1501.634) [-1476.781] (-1484.005) * (-1542.733) [-1492.654] (-1550.822) (-1485.930) -- 0:00:41
934000 -- (-1553.795) (-1496.598) [-1482.640] (-1491.079) * (-1540.450) (-1514.285) (-1568.739) [-1486.637] -- 0:00:41
935000 -- (-1552.410) (-1482.510) (-1491.567) [-1482.678] * (-1543.854) (-1499.072) (-1559.263) [-1484.318] -- 0:00:40
Average standard deviation of split frequencies: 0.007356
936000 -- (-1550.985) (-1487.028) [-1479.562] (-1480.036) * (-1544.668) (-1499.720) (-1550.996) [-1478.267] -- 0:00:40
937000 -- (-1555.935) [-1477.134] (-1485.259) (-1482.356) * (-1555.018) (-1491.022) (-1563.234) [-1477.801] -- 0:00:39
938000 -- (-1537.501) [-1481.532] (-1478.053) (-1494.757) * (-1551.582) (-1486.561) (-1546.945) [-1476.484] -- 0:00:38
939000 -- (-1533.409) (-1481.645) (-1488.276) [-1483.106] * (-1538.537) (-1487.404) (-1552.914) [-1487.342] -- 0:00:38
940000 -- (-1535.942) [-1485.579] (-1481.937) (-1480.217) * (-1540.401) (-1483.963) (-1558.763) [-1482.606] -- 0:00:37
Average standard deviation of split frequencies: 0.007728
941000 -- (-1537.334) (-1483.673) (-1479.657) [-1478.934] * (-1533.258) (-1482.010) (-1550.515) [-1469.860] -- 0:00:36
942000 -- (-1544.294) (-1486.245) [-1479.386] (-1488.065) * (-1537.050) (-1487.757) (-1551.070) [-1492.453] -- 0:00:36
943000 -- (-1538.643) (-1486.163) (-1488.978) [-1473.290] * (-1543.727) [-1480.228] (-1562.091) (-1483.275) -- 0:00:35
944000 -- (-1542.839) (-1492.612) (-1485.937) [-1480.821] * (-1543.616) (-1496.050) (-1557.751) [-1483.587] -- 0:00:35
945000 -- (-1542.896) (-1485.142) [-1484.587] (-1485.817) * (-1537.920) (-1480.457) (-1562.257) [-1479.899] -- 0:00:34
Average standard deviation of split frequencies: 0.007724
946000 -- (-1551.246) [-1480.935] (-1484.651) (-1479.752) * (-1536.564) (-1478.442) (-1548.754) [-1474.736] -- 0:00:33
947000 -- (-1547.117) [-1479.534] (-1479.618) (-1502.448) * (-1544.942) [-1481.262] (-1550.420) (-1481.332) -- 0:00:33
948000 -- (-1541.299) [-1474.570] (-1477.207) (-1498.245) * (-1532.839) [-1477.301] (-1553.948) (-1479.423) -- 0:00:32
949000 -- (-1540.396) [-1476.853] (-1482.373) (-1505.886) * (-1546.119) [-1471.977] (-1550.353) (-1476.562) -- 0:00:32
950000 -- (-1547.554) (-1478.695) [-1485.646] (-1490.377) * (-1544.150) (-1478.452) (-1568.176) [-1473.676] -- 0:00:31
Average standard deviation of split frequencies: 0.007773
951000 -- (-1540.315) (-1481.771) [-1485.134] (-1486.608) * (-1541.123) [-1483.599] (-1552.588) (-1481.941) -- 0:00:30
952000 -- (-1537.471) [-1479.906] (-1495.944) (-1492.123) * (-1531.634) [-1479.055] (-1561.719) (-1480.521) -- 0:00:30
953000 -- (-1540.565) [-1484.807] (-1489.722) (-1482.009) * (-1526.957) [-1487.650] (-1572.213) (-1484.930) -- 0:00:29
954000 -- (-1532.147) [-1483.624] (-1486.951) (-1481.409) * (-1536.659) (-1474.990) (-1541.840) [-1469.146] -- 0:00:28
955000 -- (-1531.631) [-1477.726] (-1480.205) (-1483.309) * (-1536.728) [-1480.622] (-1554.002) (-1471.301) -- 0:00:28
Average standard deviation of split frequencies: 0.007476
956000 -- (-1535.717) (-1489.636) [-1470.842] (-1494.943) * (-1533.656) (-1490.694) (-1554.653) [-1475.777] -- 0:00:27
957000 -- (-1535.170) (-1490.335) [-1485.916] (-1480.106) * (-1530.144) (-1486.449) (-1541.407) [-1486.019] -- 0:00:27
958000 -- (-1547.876) [-1487.110] (-1490.554) (-1492.583) * (-1533.021) [-1492.681] (-1562.973) (-1488.857) -- 0:00:26
959000 -- (-1553.467) [-1485.536] (-1497.070) (-1482.304) * (-1528.100) (-1488.894) (-1566.300) [-1476.165] -- 0:00:25
960000 -- (-1552.832) (-1493.050) (-1487.132) [-1484.955] * (-1531.327) [-1488.496] (-1547.540) (-1480.891) -- 0:00:25
Average standard deviation of split frequencies: 0.007361
961000 -- (-1544.810) (-1488.325) (-1494.015) [-1483.321] * (-1542.284) [-1484.943] (-1554.613) (-1495.457) -- 0:00:24
962000 -- (-1535.878) [-1486.138] (-1504.129) (-1485.812) * (-1541.694) (-1473.466) (-1567.300) [-1488.063] -- 0:00:23
963000 -- (-1542.510) [-1491.996] (-1508.641) (-1481.904) * (-1539.988) (-1477.703) (-1567.787) [-1487.738] -- 0:00:23
964000 -- (-1531.017) (-1480.323) (-1487.257) [-1488.609] * (-1531.347) [-1477.655] (-1555.603) (-1480.886) -- 0:00:22
965000 -- (-1542.719) (-1489.436) (-1496.217) [-1480.335] * (-1544.592) [-1473.198] (-1561.009) (-1484.152) -- 0:00:22
Average standard deviation of split frequencies: 0.007241
966000 -- (-1537.938) [-1478.835] (-1489.240) (-1470.769) * (-1544.918) (-1476.519) (-1560.740) [-1481.779] -- 0:00:21
967000 -- (-1539.423) (-1485.341) [-1481.889] (-1486.965) * (-1543.242) [-1480.248] (-1573.148) (-1489.169) -- 0:00:20
968000 -- (-1555.128) [-1482.393] (-1492.782) (-1489.181) * (-1559.276) (-1482.128) (-1580.967) [-1490.733] -- 0:00:20
969000 -- (-1544.191) [-1483.773] (-1476.215) (-1482.878) * (-1553.681) [-1478.396] (-1575.022) (-1493.883) -- 0:00:19
970000 -- (-1539.470) [-1484.606] (-1479.355) (-1480.115) * (-1538.490) [-1478.253] (-1556.116) (-1490.677) -- 0:00:18
Average standard deviation of split frequencies: 0.007062
971000 -- (-1543.185) (-1489.245) [-1483.112] (-1483.554) * (-1542.806) (-1483.610) (-1547.166) [-1481.526] -- 0:00:18
972000 -- (-1541.731) [-1494.338] (-1494.069) (-1480.294) * (-1544.741) (-1480.700) (-1548.696) [-1473.904] -- 0:00:17
973000 -- (-1548.403) (-1491.401) [-1483.830] (-1475.805) * (-1539.365) (-1487.020) (-1541.486) [-1484.111] -- 0:00:16
974000 -- (-1545.677) (-1492.060) (-1515.444) [-1474.769] * (-1534.680) [-1478.821] (-1562.364) (-1493.676) -- 0:00:16
975000 -- (-1541.987) (-1477.225) (-1487.307) [-1480.738] * (-1538.704) (-1481.422) (-1554.513) [-1490.391] -- 0:00:15
Average standard deviation of split frequencies: 0.007151
976000 -- (-1540.663) (-1493.635) (-1488.207) [-1477.277] * (-1525.625) [-1484.117] (-1546.484) (-1499.857) -- 0:00:15
977000 -- (-1524.100) (-1498.647) (-1487.160) [-1482.078] * (-1540.212) [-1489.297] (-1547.826) (-1492.488) -- 0:00:14
978000 -- (-1545.741) (-1496.726) (-1487.515) [-1473.102] * (-1540.838) (-1484.748) (-1566.908) [-1487.754] -- 0:00:13
979000 -- (-1547.622) (-1491.544) [-1485.420] (-1479.498) * (-1533.228) [-1485.330] (-1563.858) (-1481.440) -- 0:00:13
980000 -- (-1543.595) (-1490.306) (-1481.764) [-1474.214] * (-1533.768) (-1493.428) (-1558.513) [-1482.583] -- 0:00:12
Average standard deviation of split frequencies: 0.007344
981000 -- (-1541.681) (-1476.416) (-1489.611) [-1475.353] * (-1530.627) (-1487.824) (-1550.415) [-1476.614] -- 0:00:11
982000 -- (-1548.301) [-1477.262] (-1483.596) (-1493.800) * (-1537.820) (-1491.256) (-1560.560) [-1471.590] -- 0:00:11
983000 -- (-1540.932) (-1484.937) [-1480.704] (-1493.699) * (-1538.984) (-1492.807) (-1555.731) [-1475.567] -- 0:00:10
984000 -- (-1549.628) (-1479.695) (-1488.691) [-1485.967] * (-1534.172) [-1480.852] (-1560.128) (-1482.888) -- 0:00:10
985000 -- (-1540.712) (-1488.883) [-1485.027] (-1498.678) * (-1535.368) [-1480.452] (-1564.500) (-1477.164) -- 0:00:09
Average standard deviation of split frequencies: 0.006972
986000 -- (-1526.104) (-1494.309) [-1472.485] (-1482.828) * (-1540.301) (-1487.969) (-1547.657) [-1475.900] -- 0:00:08
987000 -- (-1537.311) (-1491.146) [-1475.962] (-1488.434) * (-1540.102) (-1483.152) (-1560.439) [-1477.341] -- 0:00:08
988000 -- (-1549.122) (-1478.263) (-1489.523) [-1488.037] * (-1543.876) [-1482.563] (-1549.579) (-1481.397) -- 0:00:07
989000 -- (-1558.029) [-1473.638] (-1487.303) (-1482.525) * (-1553.022) [-1478.375] (-1547.602) (-1484.296) -- 0:00:06
990000 -- (-1542.164) [-1478.813] (-1476.958) (-1503.375) * (-1538.171) (-1491.148) (-1562.995) [-1486.294] -- 0:00:06
Average standard deviation of split frequencies: 0.006900
991000 -- (-1564.107) (-1480.702) [-1472.637] (-1510.628) * (-1550.192) (-1490.194) (-1564.721) [-1477.889] -- 0:00:05
992000 -- (-1551.037) [-1484.071] (-1479.237) (-1503.014) * (-1539.744) (-1486.547) (-1567.924) [-1484.493] -- 0:00:05
993000 -- (-1540.207) [-1477.359] (-1487.318) (-1502.426) * (-1530.528) (-1483.316) (-1565.166) [-1484.072] -- 0:00:04
994000 -- (-1543.474) (-1491.178) [-1476.738] (-1490.669) * (-1535.438) [-1477.072] (-1566.041) (-1496.988) -- 0:00:03
995000 -- (-1534.589) (-1495.182) [-1480.442] (-1493.631) * (-1544.737) [-1479.353] (-1550.679) (-1485.184) -- 0:00:03
Average standard deviation of split frequencies: 0.006744
996000 -- (-1534.938) (-1475.914) [-1478.617] (-1492.187) * (-1541.292) [-1473.636] (-1558.091) (-1488.353) -- 0:00:02
997000 -- (-1526.246) (-1486.747) [-1487.337] (-1492.816) * (-1532.750) [-1481.690] (-1551.955) (-1496.600) -- 0:00:01
998000 -- (-1540.583) (-1494.329) (-1489.461) [-1471.979] * (-1539.888) [-1480.512] (-1548.265) (-1483.466) -- 0:00:01
999000 -- (-1548.892) (-1495.707) (-1498.475) [-1482.881] * (-1538.620) (-1487.704) (-1554.667) [-1477.965] -- 0:00:00
1000000 -- (-1547.057) (-1503.825) (-1494.529) [-1475.590] * (-1533.035) [-1487.148] (-1553.878) (-1489.178) -- 0:00:00
Average standard deviation of split frequencies: 0.006988
Analysis completed in 10 mins 29 seconds
Analysis used 627.78 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -1462.80
Likelihood of best state for "cold" chain of run 2 was -1466.11
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
64.1 % ( 62 %) Dirichlet(Revmat{all})
80.0 % ( 72 %) Slider(Revmat{all})
26.6 % ( 26 %) Dirichlet(Pi{all})
28.4 % ( 31 %) Slider(Pi{all})
79.9 % ( 69 %) Multiplier(Alpha{1,2})
75.7 % ( 63 %) Multiplier(Alpha{3})
86.9 % ( 81 %) Slider(Pinvar{all})
63.9 % ( 62 %) ExtSPR(Tau{all},V{all})
55.5 % ( 59 %) ExtTBR(Tau{all},V{all})
71.1 % ( 74 %) NNI(Tau{all},V{all})
45.1 % ( 42 %) ParsSPR(Tau{all},V{all})
27.6 % ( 22 %) Multiplier(V{all})
77.8 % ( 78 %) Nodeslider(V{all})
26.4 % ( 24 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
64.8 % ( 62 %) Dirichlet(Revmat{all})
80.1 % ( 64 %) Slider(Revmat{all})
25.9 % ( 29 %) Dirichlet(Pi{all})
27.8 % ( 19 %) Slider(Pi{all})
80.9 % ( 64 %) Multiplier(Alpha{1,2})
75.5 % ( 45 %) Multiplier(Alpha{3})
86.8 % ( 71 %) Slider(Pinvar{all})
63.9 % ( 53 %) ExtSPR(Tau{all},V{all})
55.2 % ( 47 %) ExtTBR(Tau{all},V{all})
70.8 % ( 67 %) NNI(Tau{all},V{all})
45.0 % ( 42 %) ParsSPR(Tau{all},V{all})
27.5 % ( 30 %) Multiplier(V{all})
77.5 % ( 76 %) Nodeslider(V{all})
26.2 % ( 23 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.38 0.08 0.00
2 | 166292 0.36 0.00
3 | 166426 166565 0.01
4 | 166716 166863 167138
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.38 0.02 0.00
2 | 166826 0.09 0.00
3 | 166909 166113 0.20
4 | 166973 166490 166689
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -1477.26
| 2 |
| 1 2 1 |
| 2 1 2 2 1 |
|1 2 2 2 1 |
|21 2 1 2 1 12 |
| 2 2 12 * 1 2 2 1 1 1 1 2 1|
| 1 2 2 1 * 1 * 1 2* 1 11 |
| * 11 1 1 *21 1 21 1 12 2 1 1 2|
| 2 1 2 1 2 * 2 |
| 2 1 2 1 2 2 2 1* 1 2 |
| 2 1 2 1 1 2 2 22 |
| 2 2 1 1 2 1 |
| 2 2 2 2 1 |
| 1 1 1 2 1 2 |
| 2 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -1485.59
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1473.08 -1497.91
2 -1473.03 -1499.90
--------------------------------------
TOTAL -1473.05 -1499.34
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.042163 0.000068 0.027914 0.059576 0.041299 1210.69 1303.25 1.000
r(A<->C){all} 0.102930 0.003094 0.013689 0.212243 0.094306 222.98 260.95 1.000
r(A<->G){all} 0.270458 0.005550 0.128420 0.413899 0.266122 318.33 342.48 1.000
r(A<->T){all} 0.057329 0.000868 0.008573 0.114493 0.052801 391.47 445.72 1.000
r(C<->G){all} 0.040544 0.001557 0.000007 0.120794 0.028896 255.15 344.94 1.000
r(C<->T){all} 0.479918 0.007130 0.318322 0.643048 0.482065 324.79 390.73 1.000
r(G<->T){all} 0.048822 0.000815 0.006895 0.107108 0.043082 635.44 652.10 1.000
pi(A){all} 0.262077 0.000215 0.235155 0.291172 0.261842 879.36 921.92 1.000
pi(C){all} 0.141573 0.000139 0.119448 0.165365 0.141057 740.81 933.71 1.000
pi(G){all} 0.211266 0.000179 0.187157 0.238652 0.211086 996.55 1016.98 1.000
pi(T){all} 0.385084 0.000255 0.356350 0.418785 0.385181 826.24 835.97 1.000
alpha{1,2} 0.861883 0.845009 0.000215 2.658506 0.546564 737.18 993.95 1.000
alpha{3} 1.008901 0.887577 0.001636 2.935658 0.728591 981.39 988.28 1.000
pinvar{all} 0.487807 0.048606 0.053839 0.827892 0.516206 287.23 428.82 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C11
4 -- C12
5 -- C14
6 -- C15
7 -- C16
8 -- C18
9 -- C19
10 -- C2
11 -- C21
12 -- C22
13 -- C23
14 -- C24
15 -- C25
16 -- C26
17 -- C28
18 -- C30
19 -- C31
20 -- C33
21 -- C34
22 -- C35
23 -- C37
24 -- C38
25 -- C4
26 -- C5
27 -- C6
28 -- C7
29 -- C8
30 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------------------------
1 -- .*****************************
2 -- .*............................
3 -- ..*...........................
4 -- ...*..........................
5 -- ....*.........................
6 -- .....*........................
7 -- ......*.......................
8 -- .......*......................
9 -- ........*.....................
10 -- .........*....................
11 -- ..........*...................
12 -- ...........*..................
13 -- ............*.................
14 -- .............*................
15 -- ..............*...............
16 -- ...............*..............
17 -- ................*.............
18 -- .................*............
19 -- ..................*...........
20 -- ...................*..........
21 -- ....................*.........
22 -- .....................*........
23 -- ......................*.......
24 -- .......................*......
25 -- ........................*.....
26 -- .........................*....
27 -- ..........................*...
28 -- ...........................*..
29 -- ............................*.
30 -- .............................*
31 -- ...*......**..**.*....**......
32 -- ..........**..**..............
33 -- ...*.............*....**......
34 -- ...................**.........
35 -- .*.......................*....
36 -- .............*....*...........
37 -- .**.**...................****.
38 -- .**.*****...**..*.****..******
39 -- .********.********************
40 -- .**.******..**..*.****..******
41 -- ...*.....***..**.*....**......
42 -- .................*.....*......
43 -- ...*.............*....*.......
44 -- ...........*..**..............
45 -- ..........*...**..............
46 -- ...*.............*............
47 -- ...*...................*......
48 -- ..........*....*..............
49 -- ..........**...*..............
50 -- ..............**..............
51 -- ...........*...*..............
52 -- ...*..................*.......
53 -- .................*....**......
54 -- ......................**......
55 -- ..........**..*...............
56 -- ..........*...*...............
57 -- .................*....*.......
58 -- ..........**..................
59 -- ...*..................**......
60 -- ...........*..*...............
61 -- ...*.............*.....*......
62 -- ...*......**.***.**...**......
63 -- .**.**...................*****
64 -- .*.......................*...*
65 -- ..*.........................*.
66 -- ..........................**..
------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 3002 1.000000 0.000000 1.000000 1.000000 2
33 2983 0.993671 0.004240 0.990673 0.996669 2
34 2922 0.973351 0.001884 0.972019 0.974684 2
35 2497 0.831779 0.005182 0.828115 0.835443 2
36 2420 0.806129 0.000942 0.805463 0.806795 2
37 2335 0.777815 0.007066 0.772818 0.782811 2
38 2038 0.678881 0.000000 0.678881 0.678881 2
39 1446 0.481679 0.004711 0.478348 0.485010 2
40 769 0.256163 0.007066 0.251166 0.261159 2
41 691 0.230180 0.003298 0.227848 0.232512 2
42 620 0.206529 0.006595 0.201865 0.211193 2
43 617 0.205530 0.007066 0.200533 0.210526 2
44 613 0.204197 0.014604 0.193871 0.214524 2
45 613 0.204197 0.002355 0.202532 0.205863 2
46 612 0.203864 0.004711 0.200533 0.207195 2
47 610 0.203198 0.001884 0.201865 0.204530 2
48 609 0.202865 0.003298 0.200533 0.205197 2
49 609 0.202865 0.007066 0.197868 0.207861 2
50 607 0.202199 0.016488 0.190540 0.213857 2
51 606 0.201865 0.020728 0.187209 0.216522 2
52 598 0.199201 0.000942 0.198534 0.199867 2
53 596 0.198534 0.012248 0.189873 0.207195 2
54 593 0.197535 0.007066 0.192538 0.202532 2
55 593 0.197535 0.008951 0.191206 0.203864 2
56 591 0.196869 0.017430 0.184544 0.209194 2
57 589 0.196203 0.011777 0.187875 0.204530 2
58 587 0.195536 0.006124 0.191206 0.199867 2
59 586 0.195203 0.014133 0.185210 0.205197 2
60 576 0.191872 0.008480 0.185876 0.197868 2
61 566 0.188541 0.005653 0.184544 0.192538 2
62 433 0.144237 0.002355 0.142572 0.145903 2
63 420 0.139907 0.004711 0.136576 0.143238 2
64 384 0.127915 0.009422 0.121252 0.134577 2
65 284 0.094604 0.014133 0.084610 0.104597 2
66 283 0.094270 0.008951 0.087941 0.100600 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.000466 0.000000 0.000000 0.001366 0.000314 1.000 2
length{all}[2] 0.000505 0.000000 0.000000 0.001525 0.000344 1.000 2
length{all}[3] 0.000450 0.000000 0.000000 0.001353 0.000302 1.000 2
length{all}[4] 0.000460 0.000000 0.000001 0.001400 0.000313 1.001 2
length{all}[5] 0.000437 0.000000 0.000000 0.001334 0.000300 1.000 2
length{all}[6] 0.000436 0.000000 0.000000 0.001348 0.000294 1.000 2
length{all}[7] 0.001381 0.000001 0.000102 0.002951 0.001238 1.001 2
length{all}[8] 0.000453 0.000000 0.000000 0.001361 0.000314 1.000 2
length{all}[9] 0.000453 0.000000 0.000000 0.001408 0.000305 1.000 2
length{all}[10] 0.000478 0.000000 0.000000 0.001431 0.000324 1.000 2
length{all}[11] 0.000445 0.000000 0.000000 0.001337 0.000303 1.000 2
length{all}[12] 0.001339 0.000001 0.000161 0.003005 0.001165 1.000 2
length{all}[13] 0.000450 0.000000 0.000000 0.001390 0.000304 1.000 2
length{all}[14] 0.000497 0.000000 0.000001 0.001473 0.000343 1.000 2
length{all}[15] 0.000463 0.000000 0.000000 0.001430 0.000311 1.001 2
length{all}[16] 0.000463 0.000000 0.000000 0.001416 0.000314 1.000 2
length{all}[17] 0.000448 0.000000 0.000000 0.001353 0.000304 1.001 2
length{all}[18] 0.000458 0.000000 0.000000 0.001334 0.000317 1.001 2
length{all}[19] 0.001400 0.000001 0.000128 0.003098 0.001225 1.000 2
length{all}[20] 0.000449 0.000000 0.000000 0.001382 0.000298 1.000 2
length{all}[21] 0.000456 0.000000 0.000000 0.001380 0.000309 1.000 2
length{all}[22] 0.000908 0.000000 0.000030 0.002127 0.000746 1.001 2
length{all}[23] 0.000445 0.000000 0.000000 0.001363 0.000305 1.000 2
length{all}[24] 0.000461 0.000000 0.000000 0.001395 0.000314 1.000 2
length{all}[25] 0.000916 0.000000 0.000008 0.002222 0.000740 1.000 2
length{all}[26] 0.000933 0.000000 0.000011 0.002285 0.000759 1.000 2
length{all}[27] 0.000454 0.000000 0.000000 0.001397 0.000311 1.000 2
length{all}[28] 0.000459 0.000000 0.000000 0.001321 0.000317 1.000 2
length{all}[29] 0.000450 0.000000 0.000000 0.001380 0.000292 1.000 2
length{all}[30] 0.000887 0.000000 0.000006 0.002243 0.000727 1.000 2
length{all}[31] 0.003365 0.000002 0.000974 0.006162 0.003130 1.001 2
length{all}[32] 0.005697 0.000004 0.002471 0.009640 0.005426 1.000 2
length{all}[33] 0.001743 0.000001 0.000219 0.003621 0.001577 1.000 2
length{all}[34] 0.000908 0.000000 0.000008 0.002259 0.000745 1.000 2
length{all}[35] 0.000876 0.000000 0.000019 0.002191 0.000708 1.000 2
length{all}[36] 0.000887 0.000000 0.000001 0.002224 0.000724 1.000 2
length{all}[37] 0.000919 0.000000 0.000020 0.002198 0.000756 1.000 2
length{all}[38] 0.000905 0.000000 0.000033 0.002181 0.000751 1.000 2
length{all}[39] 0.000719 0.000000 0.000000 0.002013 0.000573 1.001 2
length{all}[40] 0.000487 0.000000 0.000001 0.001497 0.000339 0.999 2
length{all}[41] 0.000499 0.000000 0.000000 0.001497 0.000339 1.000 2
length{all}[42] 0.000414 0.000000 0.000000 0.001189 0.000288 1.000 2
length{all}[43] 0.000462 0.000000 0.000001 0.001447 0.000301 0.999 2
length{all}[44] 0.000426 0.000000 0.000001 0.001359 0.000290 1.003 2
length{all}[45] 0.000476 0.000000 0.000001 0.001472 0.000329 0.999 2
length{all}[46] 0.000476 0.000000 0.000001 0.001436 0.000322 0.998 2
length{all}[47] 0.000462 0.000000 0.000000 0.001473 0.000310 1.000 2
length{all}[48] 0.000422 0.000000 0.000002 0.001283 0.000284 0.998 2
length{all}[49] 0.000474 0.000000 0.000000 0.001364 0.000341 1.008 2
length{all}[50] 0.000444 0.000000 0.000002 0.001362 0.000350 1.001 2
length{all}[51] 0.000459 0.000000 0.000000 0.001404 0.000314 1.000 2
length{all}[52] 0.000474 0.000000 0.000001 0.001506 0.000316 0.999 2
length{all}[53] 0.000480 0.000000 0.000002 0.001555 0.000319 1.002 2
length{all}[54] 0.000476 0.000000 0.000001 0.001509 0.000319 0.998 2
length{all}[55] 0.000488 0.000000 0.000001 0.001457 0.000342 0.998 2
length{all}[56] 0.000464 0.000000 0.000001 0.001404 0.000327 0.998 2
length{all}[57] 0.000456 0.000000 0.000001 0.001383 0.000305 0.999 2
length{all}[58] 0.000473 0.000000 0.000001 0.001463 0.000293 1.001 2
length{all}[59] 0.000478 0.000000 0.000000 0.001471 0.000329 0.998 2
length{all}[60] 0.000467 0.000000 0.000002 0.001435 0.000325 0.998 2
length{all}[61] 0.000463 0.000000 0.000001 0.001362 0.000320 0.998 2
length{all}[62] 0.000889 0.000001 0.000008 0.002256 0.000700 0.998 2
length{all}[63] 0.000799 0.000000 0.000005 0.002107 0.000629 0.998 2
length{all}[64] 0.000862 0.000000 0.000020 0.002000 0.000717 1.005 2
length{all}[65] 0.000405 0.000000 0.000005 0.001244 0.000267 0.996 2
length{all}[66] 0.000470 0.000000 0.000005 0.001489 0.000295 0.997 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.006988
Maximum standard deviation of split frequencies = 0.020728
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.008
Clade credibility values:
/---------------------------------------------------------------------- C1 (1)
|
|---------------------------------------------------------------------- C2 (10)
|
| /----------------- C12 (4)
| |
| |----------------- C30 (18)
| /--------99-------+
| | |----------------- C37 (23)
| | |
| | \----------------- C38 (24)
|----------------100---------------+
| | /----------------- C21 (11)
| | |
| | |----------------- C22 (12)
| \-------100-------+
| |----------------- C25 (15)
| |
| \----------------- C26 (16)
|
| /----------------- C10 (2)
| /--------83-------+
+ | \----------------- C5 (26)
| |
| |----------------------------------- C11 (3)
| |
| |----------------------------------- C14 (5)
| |
| /-------78-------+----------------------------------- C15 (6)
| | |
| | |----------------------------------- C6 (27)
| | |
| | |----------------------------------- C7 (28)
| | |
| | \----------------------------------- C8 (29)
| |
| |---------------------------------------------------- C16 (7)
| |
| |---------------------------------------------------- C18 (8)
| |
| |---------------------------------------------------- C19 (9)
| |
| |---------------------------------------------------- C23 (13)
\--------68-------+
| /----------------- C24 (14)
|----------------81----------------+
| \----------------- C31 (19)
|
|---------------------------------------------------- C28 (17)
|
| /----------------- C33 (20)
|----------------97----------------+
| \----------------- C34 (21)
|
|---------------------------------------------------- C35 (22)
|
|---------------------------------------------------- C4 (25)
|
\---------------------------------------------------- C9 (30)
Phylogram (based on average branch lengths):
/-- C1 (1)
|
|-- C2 (10)
|
| /-- C12 (4)
| |
| |-- C30 (18)
| /----------+
| | |-- C37 (23)
| | |
| | \-- C38 (24)
|----------------------+
| | /-- C21 (11)
| | |
| | |-------- C22 (12)
| \--------------------------------------+
| |-- C25 (15)
| |
| \-- C26 (16)
|
| /-- C10 (2)
| /----+
+ | \----- C5 (26)
| |
| |-- C11 (3)
| |
| |-- C14 (5)
| |
| /-----+-- C15 (6)
| | |
| | |-- C6 (27)
| | |
| | |-- C7 (28)
| | |
| | \-- C8 (29)
| |
| |--------- C16 (7)
| |
| |--- C18 (8)
| |
| |--- C19 (9)
| |
| |--- C23 (13)
\----+
| /-- C24 (14)
|-----+
| \-------- C31 (19)
|
|--- C28 (17)
|
| /-- C33 (20)
|-----+
| \-- C34 (21)
|
|------ C35 (22)
|
|------ C4 (25)
|
\------ C9 (30)
|-------------| 0.002 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Wed Nov 23 21:54:13 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.16 sec, SCORE=1000, Nseq=38, Len=303
C1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C2 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C3 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C4 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C5 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C6 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C7 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C8 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C9 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C10 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C11 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C12 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C13 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C14 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C15 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C16 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C17 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C18 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C19 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C20 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C21 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C22 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C23 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C24 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C25 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C26 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C27 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C28 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C29 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C30 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C31 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C32 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C33 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C34 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C35 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMN
C36 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C37 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
C38 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMN
****************:*************************** *****
C1 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C2 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C3 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C4 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C5 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C6 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C7 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C8 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C9 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C10 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C11 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C12 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C13 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C14 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C15 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C16 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C17 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C18 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C19 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C20 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C21 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C22 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C23 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C24 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C25 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C26 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C27 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C28 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C29 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C30 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C31 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C32 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C33 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C34 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C35 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C36 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C37 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
C38 EPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPK
**************************************************
C1 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C2 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C3 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C4 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C5 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C6 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C7 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C8 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C9 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C10 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C11 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C12 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C13 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C14 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C15 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C16 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C17 YTFGNVKPGETFTVLAAYNGPPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C18 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C19 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C20 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C21 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C22 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C23 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C24 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C25 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C26 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C27 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C28 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C29 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C30 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C31 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C32 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C33 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C34 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C35 YTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C36 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C37 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
C38 YTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGY
**** *************** *****************************
C1 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C2 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C3 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C4 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C5 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C6 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C7 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C8 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C9 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C10 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C11 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C12 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C13 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C14 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C15 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C16 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C17 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C18 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C19 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C20 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C21 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C22 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C23 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C24 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C25 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C26 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C27 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C28 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C29 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C30 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C31 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C32 VLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQ
C33 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C34 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C35 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYIQ
C36 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C37 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
C38 VLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQ
***************************.********************:*
C1 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C2 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C3 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C4 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C5 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C6 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C7 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C8 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C9 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C10 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C11 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C12 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C13 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C14 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C15 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C16 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C17 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C18 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C19 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C20 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C21 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C22 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C23 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C24 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C25 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C26 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C27 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C28 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C29 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C30 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C31 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C32 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C33 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C34 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C35 TVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDA
C36 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C37 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
C38 TVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDA
************************** ********:**************
C1 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C2 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C3 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C4 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C5 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C6 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C7 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C8 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C9 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C10 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C11 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C12 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C13 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C14 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C15 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C16 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C17 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C18 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C19 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C20 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C21 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C22 LASMTGVSIEILLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C23 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C24 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C25 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C26 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C27 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C28 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C29 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C30 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C31 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C32 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C33 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C34 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C35 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C36 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C37 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
C38 LASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
********** ***************************************
C1 KLQ
C2 KLQ
C3 KLQ
C4 KLQ
C5 KLQ
C6 KLQ
C7 KLQ
C8 KLQ
C9 KLQ
C10 KLQ
C11 KLQ
C12 KLQ
C13 KLQ
C14 KLQ
C15 KLQ
C16 KLQ
C17 KLQ
C18 KLQ
C19 KLQ
C20 KLQ
C21 KLQ
C22 KLQ
C23 KLQ
C24 KLQ
C25 KLQ
C26 KLQ
C27 KLQ
C28 KLQ
C29 KLQ
C30 KLQ
C31 KLQ
C32 KLQ
C33 KLQ
C34 KLQ
C35 KLQ
C36 KLQ
C37 KLQ
C38 KLQ
***
-- Starting log on Thu Nov 24 01:01:33 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result/original_alignment/codeml,BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C14 909 sites
reading seq# 2 C19 909 sites
reading seq# 3 C11 909 sites
reading seq# 4 C24 909 sites
reading seq# 5 C9 909 sites
reading seq# 6 C15 909 sites
reading seq# 7 C30 909 sites
reading seq# 8 C5 909 sites
reading seq# 9 C2 909 sites
reading seq#10 C33 909 sites
reading seq#11 C38 909 sites
reading seq#12 C22 909 sites
reading seq#13 C18 909 sites
reading seq#14 C16 909 sites
reading seq#15 C12 909 sites
reading seq#16 C7 909 sites
reading seq#17 C8 909 sites
reading seq#18 C35 909 sites
reading seq#19 C10 909 sites
reading seq#20 C37 909 sites
reading seq#21 C23 909 sites
reading seq#22 C21 909 sites
reading seq#23 C26 909 sites
reading seq#24 C1 909 sites
reading seq#25 C28 909 sites
reading seq#26 C31 909 sites
reading seq#27 C6 909 sites
reading seq#28 C25 909 sites
reading seq#29 C34 909 sites
reading seq#30 C4 909 sitesns = 30 ls = 909
Reading sequences, sequential format..
Reading seq # 1: C14
Reading seq # 2: C19
Reading seq # 3: C11
Reading seq # 4: C24
Reading seq # 5: C9
Reading seq # 6: C15
Reading seq # 7: C30
Reading seq # 8: C5
Reading seq # 9: C2
Reading seq #10: C33
Reading seq #11: C38
Reading seq #12: C22
Reading seq #13: C18
Reading seq #14: C16
Reading seq #15: C12
Reading seq #16: C7
Reading seq #17: C8
Reading seq #18: C35
Reading seq #19: C10
Reading seq #20: C37
Reading seq #21: C23
Reading seq #22: C21
Reading seq #23: C26
Reading seq #24: C1
Reading seq #25: C28
Reading seq #26: C31
Reading seq #27: C6
Reading seq #28: C25
Reading seq #29: C34
Reading seq #30: C4
Sequences read..
Counting site patterns.. 0:00
Compressing, 75 patterns at 303 / 303 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 75 patterns at 303 / 303 sites (100.0%), 0:00
Counting codons..
3480 bytes for distance
73200 bytes for conP
6600 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(24, 9, ((15, 7, 20, 11), (22, 12, 28, 23)), (((19, 8), 3, 1, 6, 27, 16, 17), 14, 13, 2, 21, (4, 26), 25, (10, 29), 18, 30, 5)); MP score: 33
329400 bytes for conP, adjusted
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
35
0.104379 0.106600 0.061623 0.071760 0.018048 0.065122 0.055109 0.060626 0.088555 0.100698 0.025342 0.080948 0.026742 0.073521 0.050654 0.020589 0.098810 0.094995 0.102644 0.061671 0.063929 0.024940 0.091563 0.106837 0.062936 0.014023 0.055731 0.109328 0.062780 0.052331 0.087192 0.105293 0.036428 0.060043 0.060787 0.021802 0.032901 0.031122 0.300000 0.895309 0.594777
ntime & nrate & np: 38 2 41
Bounds (np=41):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 9.237527
np = 41
lnL0 = -2044.018357
Iterating by ming2
Initial: fx= 2044.018357
x= 0.10438 0.10660 0.06162 0.07176 0.01805 0.06512 0.05511 0.06063 0.08855 0.10070 0.02534 0.08095 0.02674 0.07352 0.05065 0.02059 0.09881 0.09499 0.10264 0.06167 0.06393 0.02494 0.09156 0.10684 0.06294 0.01402 0.05573 0.10933 0.06278 0.05233 0.08719 0.10529 0.03643 0.06004 0.06079 0.02180 0.03290 0.03112 0.30000 0.89531 0.59478
1 h-m-p 0.0000 0.0000 1641.4679 ++ 1911.587023 m 0.0000 46 | 1/41
2 h-m-p 0.0000 0.0000 12377.1120 ++ 1879.411714 m 0.0000 90 | 2/41
3 h-m-p 0.0000 0.0000 12241273.9876 ++ 1825.780185 m 0.0000 134 | 3/41
4 h-m-p 0.0000 0.0000 19974.0739 ++ 1815.098691 m 0.0000 178 | 4/41
5 h-m-p 0.0000 0.0000 15598.6504 ++ 1654.405842 m 0.0000 222 | 5/41
6 h-m-p 0.0000 0.0000 35318.3266 ++ 1639.331315 m 0.0000 266 | 6/41
7 h-m-p 0.0000 0.0000 50240.0284 ++ 1635.968252 m 0.0000 310 | 7/41
8 h-m-p 0.0000 0.0000 234122.5511 ++ 1614.301419 m 0.0000 354 | 8/41
9 h-m-p 0.0000 0.0000 1488213.9768 ++ 1611.394132 m 0.0000 398 | 9/41
10 h-m-p 0.0000 0.0000 33075.7337 ++ 1610.816924 m 0.0000 442 | 10/41
11 h-m-p 0.0000 0.0000 55798.0722 ++ 1606.352640 m 0.0000 486 | 11/41
12 h-m-p 0.0000 0.0000 35993.5673 ++ 1597.767959 m 0.0000 530 | 12/41
13 h-m-p 0.0000 0.0000 13885.7021 ++ 1594.172811 m 0.0000 574 | 13/41
14 h-m-p 0.0000 0.0000 17837.1878 ++ 1545.169281 m 0.0000 618 | 14/41
15 h-m-p 0.0000 0.0000 16399.2198 ++ 1512.138977 m 0.0000 662 | 15/41
16 h-m-p 0.0000 0.0000 8866.8919 ++ 1491.371328 m 0.0000 706 | 16/41
17 h-m-p 0.0000 0.0000 16305.5442 ++ 1491.251381 m 0.0000 750 | 17/41
18 h-m-p 0.0000 0.0000 7848.3589 ++ 1485.452190 m 0.0000 794 | 18/41
19 h-m-p 0.0000 0.0000 12877.4872 ++ 1483.511469 m 0.0000 838 | 19/41
20 h-m-p 0.0000 0.0000 4798.8983 ++ 1481.892871 m 0.0000 882 | 20/41
21 h-m-p 0.0000 0.0000 16326.5150 ++ 1480.834331 m 0.0000 926 | 21/41
22 h-m-p 0.0000 0.0000 2309.6180 ++ 1480.269974 m 0.0000 970 | 22/41
23 h-m-p 0.0000 0.0000 1994.2786 ++ 1479.348218 m 0.0000 1014 | 23/41
24 h-m-p 0.0000 0.0002 734.1544 ++CCYCCC 1458.653473 5 0.0002 1070 | 23/41
25 h-m-p 0.0002 0.0008 112.6666 ++ 1444.383563 m 0.0008 1114 | 24/41
26 h-m-p 0.0001 0.0007 172.3661 +YCYYYCCCCC 1429.157656 9 0.0006 1173 | 24/41
27 h-m-p 0.0002 0.0008 139.5570 ++ 1422.359954 m 0.0008 1217 | 24/41
28 h-m-p 0.0000 0.0000 328.6025
h-m-p: 1.02257169e-20 5.11285843e-20 3.28602450e+02 1422.359954
.. | 24/41
29 h-m-p 0.0000 0.0000 5162.3090 YCCCCC 1416.040021 5 0.0000 1312 | 24/41
30 h-m-p 0.0000 0.0001 539.1679 +YYYYCC 1409.497805 5 0.0000 1363 | 24/41
31 h-m-p 0.0000 0.0000 814.2013 YCCCC 1408.516936 4 0.0000 1414 | 24/41
32 h-m-p 0.0000 0.0000 487.9648 +YYCCCC 1407.531567 5 0.0000 1467 | 24/41
33 h-m-p 0.0000 0.0000 278.1122 YCCCC 1407.001767 4 0.0000 1518 | 24/41
34 h-m-p 0.0000 0.0001 537.8967 CCCC 1406.363925 3 0.0000 1568 | 24/41
35 h-m-p 0.0000 0.0001 740.7787 CCCC 1405.777186 3 0.0000 1618 | 24/41
36 h-m-p 0.0000 0.0000 405.3882 CCC 1405.569456 2 0.0000 1666 | 24/41
37 h-m-p 0.0000 0.0004 223.6102 +CCCCC 1404.541312 4 0.0001 1719 | 24/41
38 h-m-p 0.0000 0.0001 368.0337 YCCCC 1403.802765 4 0.0001 1770 | 24/41
39 h-m-p 0.0000 0.0001 837.8935 +YYCCCC 1400.976048 5 0.0001 1823 | 24/41
40 h-m-p 0.0000 0.0000 6681.8313 YCYCCC 1397.802871 5 0.0000 1875 | 24/41
41 h-m-p 0.0000 0.0000 977.3013 CYC 1397.526154 2 0.0000 1922 | 24/41
42 h-m-p 0.0000 0.0001 97.9898 YCC 1397.493537 2 0.0000 1969 | 23/41
43 h-m-p 0.0000 0.0002 421.3042 +YYCCC 1395.646684 4 0.0001 2020 | 23/41
44 h-m-p 0.0001 0.0004 73.3364 CCCCC 1395.477643 4 0.0001 2072 | 23/41
45 h-m-p 0.0000 0.0005 433.4836 ++YCYYCCC 1392.536090 6 0.0004 2127 | 23/41
46 h-m-p 0.0000 0.0001 13493.4265 +CYYCYCCC 1381.009317 7 0.0001 2183 | 23/41
47 h-m-p 0.1321 0.6604 0.7582 YCCC 1378.878286 3 0.3356 2232 | 23/41
48 h-m-p 0.4247 2.1233 0.3262 CYC 1377.908351 2 0.5330 2297 | 23/41
49 h-m-p 0.2922 1.4612 0.3096 +YYCCC 1375.378720 4 1.0555 2366 | 23/41
50 h-m-p 0.2800 1.3998 0.3915 +YYYYCC 1372.855654 5 1.0636 2435 | 23/41
51 h-m-p 0.4453 2.2266 0.4173 +YCYCC 1371.489418 4 1.2876 2504 | 23/41
52 h-m-p 0.8522 4.2611 0.3236 ++ 1369.602923 m 4.2611 2566 | 24/41
53 h-m-p 0.4951 2.4757 1.0750 CCCC 1368.987849 3 0.8555 2634 | 24/41
54 h-m-p 1.6000 8.0000 0.1846 CCCC 1368.738280 3 1.4397 2684 | 24/41
55 h-m-p 1.6000 8.0000 0.0983 YCCC 1368.489229 3 3.2278 2750 | 24/41
56 h-m-p 1.6000 8.0000 0.0097 CCCC 1368.376533 3 2.5905 2817 | 24/41
57 h-m-p 0.2234 8.0000 0.1127 +YC 1368.315452 1 2.0661 2880 | 24/41
58 h-m-p 1.1730 8.0000 0.1986 YC 1368.267172 1 2.4492 2942 | 24/41
59 h-m-p 1.6000 8.0000 0.1279 YCC 1368.220540 2 2.9829 3006 | 24/41
60 h-m-p 1.6000 8.0000 0.1483 CC 1368.195317 1 1.8592 3069 | 24/41
61 h-m-p 1.6000 8.0000 0.0743 CC 1368.183247 1 1.8811 3132 | 24/41
62 h-m-p 1.6000 8.0000 0.0039 CC 1368.181708 1 1.8057 3195 | 24/41
63 h-m-p 1.6000 8.0000 0.0019 CC 1368.181462 1 2.2862 3258 | 24/41
64 h-m-p 1.6000 8.0000 0.0020 +YC 1368.181236 1 4.5501 3321 | 24/41
65 h-m-p 1.6000 8.0000 0.0009 C 1368.181102 0 2.1985 3382 | 24/41
66 h-m-p 0.7991 8.0000 0.0023 +C 1368.181044 0 2.8412 3444 | 24/41
67 h-m-p 1.5208 8.0000 0.0044 C 1368.181029 0 1.7106 3505 | 24/41
68 h-m-p 1.6000 8.0000 0.0001 C 1368.181027 0 1.8222 3566 | 24/41
69 h-m-p 1.6000 8.0000 0.0001 Y 1368.181027 0 1.2638 3627 | 24/41
70 h-m-p 0.6923 8.0000 0.0002 C 1368.181027 0 0.8643 3688 | 24/41
71 h-m-p 1.6000 8.0000 0.0001 Y 1368.181027 0 0.2703 3749 | 24/41
72 h-m-p 0.4191 8.0000 0.0001 Y 1368.181027 0 0.1048 3810 | 24/41
73 h-m-p 0.1548 8.0000 0.0000 -----Y 1368.181027 0 0.0000 3876
Out..
lnL = -1368.181027
3877 lfun, 11631 eigenQcodon, 294652 P(t)
end of tree file.
Time used: 2:05
Model 2: PositiveSelection
TREE # 1
(24, 9, ((15, 7, 20, 11), (22, 12, 28, 23)), (((19, 8), 3, 1, 6, 27, 16, 17), 14, 13, 2, 21, (4, 26), 25, (10, 29), 18, 30, 5)); MP score: 33
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
35
0.067134 0.015976 0.058566 0.019578 0.034355 0.104019 0.024648 0.034887 0.028653 0.042077 0.023727 0.109609 0.020439 0.099562 0.053439 0.084960 0.022481 0.066370 0.052919 0.092935 0.049200 0.044428 0.037049 0.050347 0.048914 0.068828 0.071620 0.016047 0.063718 0.069490 0.031604 0.059764 0.046693 0.059296 0.059718 0.066007 0.041121 0.109616 7.739535 0.874659 0.407301 0.465613 1.401870
ntime & nrate & np: 38 3 43
Bounds (np=43):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 1.861938
np = 43
lnL0 = -1837.647583
Iterating by ming2
Initial: fx= 1837.647583
x= 0.06713 0.01598 0.05857 0.01958 0.03436 0.10402 0.02465 0.03489 0.02865 0.04208 0.02373 0.10961 0.02044 0.09956 0.05344 0.08496 0.02248 0.06637 0.05292 0.09294 0.04920 0.04443 0.03705 0.05035 0.04891 0.06883 0.07162 0.01605 0.06372 0.06949 0.03160 0.05976 0.04669 0.05930 0.05972 0.06601 0.04112 0.10962 7.73954 0.87466 0.40730 0.46561 1.40187
1 h-m-p 0.0000 0.0001 1299.2597 ++ 1717.125931 m 0.0001 48 | 1/43
2 h-m-p 0.0000 0.0000 313932.1212 ++ 1716.487759 m 0.0000 94 | 2/43
3 h-m-p 0.0000 0.0000 21971.4109 ++ 1684.680938 m 0.0000 140 | 3/43
4 h-m-p 0.0000 0.0000 5419.3902 ++ 1667.169255 m 0.0000 186 | 4/43
5 h-m-p 0.0000 0.0000 3183.0371 ++ 1652.424755 m 0.0000 232 | 5/43
6 h-m-p 0.0000 0.0000 1186.8373 ++ 1616.224631 m 0.0000 278 | 5/43
7 h-m-p 0.0000 0.0000 6009.3486 ++ 1603.921528 m 0.0000 324 | 6/43
8 h-m-p 0.0000 0.0000 33340.9119 ++ 1600.933440 m 0.0000 370 | 7/43
9 h-m-p 0.0000 0.0000 4924.8345 ++ 1598.889972 m 0.0000 416 | 7/43
10 h-m-p 0.0000 0.0000 3132.7385 ++ 1586.305103 m 0.0000 462 | 8/43
11 h-m-p 0.0000 0.0000 2851.9700 ++ 1563.457002 m 0.0000 508 | 9/43
12 h-m-p 0.0000 0.0000 7535.5119 ++ 1552.055989 m 0.0000 554 | 10/43
13 h-m-p 0.0000 0.0000 73616.7208 ++ 1532.789606 m 0.0000 600 | 11/43
14 h-m-p 0.0000 0.0000 29777.3470 ++ 1528.391092 m 0.0000 646 | 12/43
15 h-m-p 0.0000 0.0000 9795.8116 ++ 1519.558882 m 0.0000 692 | 13/43
16 h-m-p 0.0000 0.0000 95186.5446 ++ 1497.803527 m 0.0000 738 | 14/43
17 h-m-p 0.0000 0.0000 74466.2116 ++ 1496.767215 m 0.0000 784 | 15/43
18 h-m-p 0.0000 0.0000 18890.1766 ++ 1495.706144 m 0.0000 830 | 16/43
19 h-m-p 0.0000 0.0000 11284.3077 ++ 1490.731646 m 0.0000 876 | 16/43
20 h-m-p -0.0000 -0.0000 99077.5864
h-m-p: -0.00000000e+00 -0.00000000e+00 9.90775864e+04 1490.731646
.. | 16/43
21 h-m-p 0.0000 0.0000 16279.0057 CYCYYCCC 1481.300770 7 0.0000 976 | 16/43
22 h-m-p 0.0000 0.0000 982.9521 ++ 1467.728851 m 0.0000 1022 | 17/43
23 h-m-p 0.0000 0.0000 13290.0057 ++ 1461.523765 m 0.0000 1068 | 18/43
24 h-m-p 0.0000 0.0000 448589.4864 ++ 1454.093745 m 0.0000 1114 | 19/43
25 h-m-p 0.0000 0.0000 1981.0373 ++ 1454.071514 m 0.0000 1160 | 20/43
26 h-m-p 0.0000 0.0000 4687.6070 ++ 1423.204370 m 0.0000 1206 | 21/43
27 h-m-p 0.0000 0.0000 12008.2205 +YCYYYYYC 1415.982025 7 0.0000 1261 | 21/43
28 h-m-p 0.0000 0.0000 17802.7601 ++ 1410.263805 m 0.0000 1307 | 22/43
29 h-m-p 0.0000 0.0000 2697.6577 ++ 1404.056491 m 0.0000 1353 | 23/43
30 h-m-p 0.0000 0.0001 304.5385 +YYCCCC 1402.369126 5 0.0000 1408 | 23/43
31 h-m-p 0.0001 0.0004 71.5559 CCCC 1402.143070 3 0.0001 1460 | 23/43
32 h-m-p 0.0001 0.0006 59.0485 CCC 1402.097690 2 0.0000 1510 | 23/43
33 h-m-p 0.0001 0.0015 21.2687 +YYYC 1402.008745 3 0.0004 1560 | 23/43
34 h-m-p 0.0000 0.0007 252.9199 ++YCCC 1401.148714 3 0.0004 1613 | 23/43
35 h-m-p 0.0001 0.0003 931.9778 ++ 1395.364169 m 0.0003 1659 | 24/43
36 h-m-p 0.0000 0.0001 4744.4647 +YCCC 1394.217263 3 0.0001 1711 | 24/43
37 h-m-p 0.0000 0.0001 1063.4130 CCCC 1394.085122 3 0.0000 1763 | 24/43
38 h-m-p 0.0001 0.0006 213.0556 YYC 1393.983326 2 0.0001 1811 | 24/43
39 h-m-p 0.0002 0.0013 103.0585 ++ 1392.863302 m 0.0013 1857 | 25/43
40 h-m-p 0.0081 0.0406 9.3367 +YYYCCC 1390.824412 5 0.0288 1911 | 25/43
41 h-m-p 0.0099 0.0494 4.7101 +YYYYYCYCCC 1383.072820 10 0.0410 1971 | 25/43
42 h-m-p 0.0441 0.2205 3.6364 +YYCCCC 1378.390981 5 0.1422 2026 | 25/43
43 h-m-p 0.0315 0.1577 16.3411 YCYCCC 1376.905391 5 0.0150 2080 | 25/43
44 h-m-p 0.0433 0.2164 1.3192 +YYYCYCCC 1372.062257 7 0.1849 2137 | 25/43
45 h-m-p 0.0760 0.3799 0.9038 +YYYCCC 1369.788400 5 0.2779 2191 | 25/43
46 h-m-p 0.3939 1.9697 0.5888 YCCC 1368.908551 3 0.8073 2260 | 25/43
47 h-m-p 0.5551 2.7753 0.1778 YCCC 1368.808206 3 0.3661 2329 | 25/43
48 h-m-p 0.2624 1.3122 0.1647 YYYC 1368.745611 3 0.2504 2396 | 25/43
49 h-m-p 1.6000 8.0000 0.0224 CCC 1368.663262 2 1.4298 2464 | 25/43
50 h-m-p 1.0948 8.0000 0.0292 YC 1368.533129 1 2.1856 2529 | 25/43
51 h-m-p 1.2894 8.0000 0.0495 CC 1368.423457 1 1.5012 2595 | 24/43
52 h-m-p 0.4463 7.0274 0.1666 CCC 1368.362166 2 0.5568 2663 | 24/43
53 h-m-p 0.0890 0.4449 0.0726 ++ 1368.328464 m 0.4449 2728 | 25/43
54 h-m-p 0.5955 8.0000 0.0429 YC 1368.301653 1 1.2048 2794 | 25/43
55 h-m-p 1.6000 8.0000 0.0164 YC 1368.274145 1 3.4541 2859 | 25/43
56 h-m-p 1.3058 8.0000 0.0434 CYC 1368.255252 2 1.1617 2926 | 25/43
57 h-m-p 1.6000 8.0000 0.0276 YCC 1368.244482 2 1.2145 2993 | 25/43
58 h-m-p 1.6000 8.0000 0.0045 +YC 1368.229945 1 4.5446 3059 | 25/43
59 h-m-p 1.4439 8.0000 0.0143 YC 1368.204549 1 3.3218 3124 | 25/43
60 h-m-p 1.6000 8.0000 0.0152 CC 1368.186004 1 2.0693 3190 | 25/43
61 h-m-p 1.6000 8.0000 0.0086 CC 1368.181493 1 1.4442 3256 | 25/43
62 h-m-p 1.6000 8.0000 0.0070 YC 1368.181223 1 1.0775 3321 | 25/43
63 h-m-p 1.6000 8.0000 0.0014 C 1368.181197 0 2.0807 3385 | 25/43
64 h-m-p 1.2950 8.0000 0.0023 +Y 1368.181108 0 6.1582 3450 | 25/43
65 h-m-p 1.6000 8.0000 0.0034 Y 1368.181079 0 1.2384 3514 | 25/43
66 h-m-p 1.6000 8.0000 0.0001 ++ 1368.181044 m 8.0000 3578 | 25/43
67 h-m-p 1.1961 8.0000 0.0009 C 1368.181029 0 1.4182 3642 | 25/43
68 h-m-p 1.6000 8.0000 0.0006 C 1368.181028 0 1.9123 3706 | 25/43
69 h-m-p 1.4372 8.0000 0.0008 +C 1368.181027 0 5.1543 3771 | 25/43
70 h-m-p 1.6000 8.0000 0.0009 Y 1368.181027 0 1.2507 3835 | 25/43
71 h-m-p 1.6000 8.0000 0.0001 C 1368.181027 0 0.4358 3899 | 25/43
72 h-m-p 0.7545 8.0000 0.0001 -C 1368.181027 0 0.0618 3964 | 25/43
73 h-m-p 0.0668 8.0000 0.0001 --------------.. | 25/43
74 h-m-p 0.0016 0.7891 0.0088 ----------- | 25/43
75 h-m-p 0.0016 0.7891 0.0088 -----------
Out..
lnL = -1368.181027
4187 lfun, 16748 eigenQcodon, 477318 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -1380.199579 S = -1342.337944 -46.575485
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 75 patterns 5:46
did 20 / 75 patterns 5:47
did 30 / 75 patterns 5:47
did 40 / 75 patterns 5:47
did 50 / 75 patterns 5:47
did 60 / 75 patterns 5:47
did 70 / 75 patterns 5:47
did 75 / 75 patterns 5:47end of tree file.
Time used: 5:47
Model 7: beta
TREE # 1
(24, 9, ((15, 7, 20, 11), (22, 12, 28, 23)), (((19, 8), 3, 1, 6, 27, 16, 17), 14, 13, 2, 21, (4, 26), 25, (10, 29), 18, 30, 5)); MP score: 33
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
35
0.095852 0.109314 0.010363 0.097229 0.027946 0.108964 0.022624 0.016872 0.020495 0.074521 0.038747 0.049607 0.096763 0.040571 0.089824 0.066924 0.017790 0.078605 0.087197 0.049940 0.024257 0.102589 0.067014 0.082991 0.016139 0.097078 0.034283 0.022136 0.062347 0.066332 0.086141 0.074498 0.107532 0.077862 0.068993 0.099375 0.018246 0.048855 7.739654 1.092398 1.070766
ntime & nrate & np: 38 1 41
Bounds (np=41):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 2.741408
np = 41
lnL0 = -1862.957290
Iterating by ming2
Initial: fx= 1862.957290
x= 0.09585 0.10931 0.01036 0.09723 0.02795 0.10896 0.02262 0.01687 0.02049 0.07452 0.03875 0.04961 0.09676 0.04057 0.08982 0.06692 0.01779 0.07860 0.08720 0.04994 0.02426 0.10259 0.06701 0.08299 0.01614 0.09708 0.03428 0.02214 0.06235 0.06633 0.08614 0.07450 0.10753 0.07786 0.06899 0.09937 0.01825 0.04886 7.73965 1.09240 1.07077
1 h-m-p 0.0000 0.0001 1147.8341 ++ 1756.527089 m 0.0001 87 | 1/41
2 h-m-p 0.0000 0.0000 8623.7005 ++ 1749.522067 m 0.0000 172 | 2/41
3 h-m-p 0.0000 0.0000 4201.8946 +YCYYCYCCC 1740.362099 8 0.0000 269 | 2/41
4 h-m-p 0.0000 0.0000 882.9673 +YYCYYYYCC 1726.733399 8 0.0000 363 | 2/41
5 h-m-p 0.0000 0.0000 5138.4504 ++ 1719.333523 m 0.0000 446 | 3/41
6 h-m-p 0.0000 0.0000 1489.8904 ++ 1715.823833 m 0.0000 529 | 4/41
7 h-m-p 0.0000 0.0000 1957.1135 ++ 1702.350874 m 0.0000 611 | 5/41
8 h-m-p 0.0000 0.0000 2250.9144 ++ 1676.484936 m 0.0000 692 | 6/41
9 h-m-p 0.0000 0.0000 12941.6189 ++ 1638.831890 m 0.0000 772 | 7/41
10 h-m-p 0.0000 0.0000 75219.2095 ++ 1562.324596 m 0.0000 851 | 8/41
11 h-m-p 0.0000 0.0000 14788.4773 ++ 1552.623126 m 0.0000 929 | 9/41
12 h-m-p 0.0000 0.0001 3997.8688 ++ 1489.398176 m 0.0001 1006 | 9/41
13 h-m-p 0.0000 0.0000 14229.7882 ++ 1481.658993 m 0.0000 1082 | 10/41
14 h-m-p 0.0000 0.0000 18334.9485 ++ 1475.615481 m 0.0000 1158 | 11/41
15 h-m-p 0.0000 0.0000 13817.3259 ++ 1459.522341 m 0.0000 1233 | 12/41
16 h-m-p 0.0000 0.0000 16471.0159 ++ 1447.210867 m 0.0000 1307 | 13/41
17 h-m-p 0.0000 0.0000 78360.1931 ++ 1443.336892 m 0.0000 1380 | 14/41
18 h-m-p 0.0000 0.0000 43797.0005 ++ 1431.526216 m 0.0000 1452 | 15/41
19 h-m-p 0.0000 0.0000 6633.0717 ++ 1429.031871 m 0.0000 1523 | 16/41
20 h-m-p 0.0000 0.0000 1180350.3228 ++ 1420.511104 m 0.0000 1593 | 17/41
21 h-m-p 0.0000 0.0000 2639.8774 ++ 1400.103967 m 0.0000 1662 | 18/41
22 h-m-p 0.0000 0.0000 1550.2007 ++ 1399.978937 m 0.0000 1730 | 19/41
23 h-m-p 0.0000 0.0000 1286860.0637 ++ 1399.537448 m 0.0000 1797 | 20/41
24 h-m-p 0.0000 0.0000 1599.5895 ++ 1397.094447 m 0.0000 1863 | 21/41
25 h-m-p 0.0000 0.0000 6659.0843 ++ 1393.785725 m 0.0000 1928 | 22/41
26 h-m-p 0.0000 0.0000 768.7954 ++ 1392.476979 m 0.0000 1992 | 23/41
27 h-m-p 0.0000 0.0007 138.6515 ++YYYYCCC 1386.823275 6 0.0006 2065 | 23/41
28 h-m-p 0.0001 0.0004 321.8452 CYCYC 1385.787813 4 0.0002 2134 | 23/41
29 h-m-p 0.0003 0.0013 8.8613 YCYCCC 1385.262313 5 0.0007 2204 | 23/41
30 h-m-p 0.0008 0.0038 5.7015 +YYYYCC 1382.494332 5 0.0029 2273 | 23/41
31 h-m-p 0.0003 0.0017 8.4444 +YYYYCCC 1380.627069 6 0.0013 2344 | 23/41
32 h-m-p 0.0036 0.0376 3.1147 +CYYCCC 1379.427123 5 0.0232 2415 | 23/41
33 h-m-p 0.0007 0.0033 72.2569 +YYCCC 1377.284816 4 0.0023 2484 | 23/41
34 h-m-p 0.0115 0.0573 4.9376 YCCCC 1375.137078 4 0.0247 2553 | 23/41
35 h-m-p 0.0085 0.0426 0.9774 CYCCC 1374.746100 4 0.0163 2622 | 23/41
36 h-m-p 0.0197 8.0000 0.8060 +YCYC 1374.035892 3 0.1437 2689 | 23/41
37 h-m-p 0.1243 0.6216 0.0362 YCYCCC 1373.266828 5 0.3107 2759 | 23/41
38 h-m-p 0.0219 0.8054 0.5144 ++YCCC 1372.726365 3 0.2465 2828 | 23/41
39 h-m-p 0.3318 1.6592 0.2711 CYC 1372.522977 2 0.3176 2893 | 23/41
40 h-m-p 0.2522 1.9430 0.3415 CYCCC 1372.281044 4 0.4500 2962 | 23/41
41 h-m-p 0.5947 2.9735 0.1044 CCC 1372.081202 2 0.4938 3028 | 23/41
42 h-m-p 0.2786 4.2130 0.1850 +YYC 1371.883112 2 0.9011 3093 | 23/41
43 h-m-p 1.3497 6.7486 0.1147 YCCC 1371.759856 3 0.8180 3160 | 23/41
44 h-m-p 0.2732 2.4874 0.3436 +YCCC 1371.615287 3 0.7032 3228 | 23/41
45 h-m-p 0.4043 2.0214 0.3816 +YYCYCC 1371.390439 5 1.3352 3298 | 23/41
46 h-m-p 0.1285 0.6423 0.2822 YYYCCCCC 1371.363286 7 0.1741 3371 | 23/41
47 h-m-p 0.1282 0.6409 0.2986 +YY
QuantileBeta(0.05, 0.00771, 0.13540) = 2.556681e-161 2000 rounds
YCYCCC 1371.259999 7 0.5391 3444 | 23/41
48 h-m-p 0.3559 1.7795 0.0736 -CC 1371.250193 1 0.0222 3509 | 23/41
49 h-m-p 0.0382 4.7571 0.0428 ++CCC 1371.161772 2 0.8261 3577 | 23/41
50 h-m-p 0.2747 1.3737 0.0509 ++ 1371.119046 m 1.3737 3639 | 23/41
51 h-m-p 0.7749 6.5395 0.0903 CYC 1371.115756 2 0.1503 3704 | 23/41
52 h-m-p 1.6000 8.0000 0.0082 YCC 1371.076924 2 2.8480 3769 | 23/41
53 h-m-p 1.6000 8.0000 0.0108 YC 1370.990800 1 2.9684 3832 | 23/41
54 h-m-p 1.6000 8.0000 0.0041 CYC 1370.914277 2 2.0817 3897 | 23/41
55 h-m-p 1.6000 8.0000 0.0026 CCC 1370.857267 2 2.1552 3963 | 23/41
56 h-m-p 0.5994 8.0000 0.0093 +CCC 1370.764805 2 2.8367 4030 | 23/41
57 h-m-p 1.6000 8.0000 0.0153 CCC 1370.689955 2 1.8421 4096 | 23/41
58 h-m-p 1.6000 8.0000 0.0020 YC 1370.620199 1 3.4162 4159 | 23/41
59 h-m-p 1.1525 8.0000 0.0059 CCC 1370.566393 2 1.7777 4225 | 23/41
60 h-m-p 1.6000 8.0000 0.0056 YC 1370.517524 1 2.8130 4288 | 23/41
61 h-m-p 1.6000 8.0000 0.0074 CCC 1370.463732 2 2.1916 4354 | 23/41
62 h-m-p 1.5852 8.0000 0.0103 YC 1370.418329 1 2.8790 4417 | 23/41
63 h-m-p 1.6000 8.0000 0.0061 +YCC 1370.299399 2 5.2634 4483 | 23/41
64 h-m-p 1.3579 8.0000 0.0236 YCCC 1370.141544 3 2.6614 4550 | 23/41
65 h-m-p 1.6000 8.0000 0.0214 +YC 1369.849942 1 4.3486 4614 | 23/41
66 h-m-p 1.6000 8.0000 0.0161 YC 1369.311594 1 3.8768 4677 | 23/41
67 h-m-p 1.2713 6.3566 0.0205 YCCCC 1368.922319 4 2.5095 4746 | 23/41
68 h-m-p 0.6480 3.2402 0.0258 CYCCC 1368.788498 4 1.0754 4815 | 23/41
69 h-m-p 1.0011 8.0000 0.0277 YC 1368.723786 1 2.4153 4878 | 23/41
70 h-m-p 1.6000 8.0000 0.0320 YCCC 1368.665311 3 2.8373 4945 | 23/41
71 h-m-p 1.6000 8.0000 0.0237 CC 1368.652920 1 1.5166 5009 | 23/41
72 h-m-p 1.6000 8.0000 0.0091 CC 1368.650821 1 1.8512 5073 | 23/41
73 h-m-p 1.6000 8.0000 0.0103 +YC 1368.648810 1 4.2363 5137 | 23/41
74 h-m-p 1.6000 8.0000 0.0204 YC 1368.646142 1 3.2147 5200 | 23/41
75 h-m-p 1.6000 8.0000 0.0071 +YC 1368.643213 1 4.2853 5264 | 23/41
76 h-m-p 1.1486 8.0000 0.0267 ++ 1368.621204 m 8.0000 5326 | 23/41
77 h-m-p 0.4194 6.6591 0.5088 +YYYYCYCCC 1368.538619 8 2.4454 5400 | 23/41
78 h-m-p 1.6000 8.0000 0.1369 YYCCCCC 1368.476024 6 2.2219 5472 | 23/41
79 h-m-p 0.9518 7.8631 0.3196 YCC 1368.456402 2 0.7925 5537 | 23/41
80 h-m-p 1.6000 8.0000 0.1442 YCYCCC 1368.405349 5 3.4957 5607 | 23/41
81 h-m-p 0.8272 8.0000 0.6094 YCCC 1368.348493 3 1.5327 5674 | 23/41
82 h-m-p 0.3834 1.9172 0.1249 CCYC 1368.297901 3 1.0645 5742 | 23/41
83 h-m-p 1.2165 8.0000 0.1093 YCCC 1368.287153 3 0.6038 5809 | 23/41
84 h-m-p 0.4175 8.0000 0.1580 CC 1368.281154 1 0.5100 5873 | 23/41
85 h-m-p 1.0768 5.3838 0.0576 YYY 1368.280091 2 1.0768 5937 | 23/41
86 h-m-p 1.6000 8.0000 0.0059 YC 1368.279866 1 1.0433 6000 | 23/41
87 h-m-p 0.5054 8.0000 0.0121 +Y 1368.279714 0 2.0215 6063 | 23/41
88 h-m-p 1.6000 8.0000 0.0143 Y 1368.279680 0 0.6636 6125 | 23/41
89 h-m-p 1.6000 8.0000 0.0057 C 1368.279652 0 2.0053 6187 | 23/41
90 h-m-p 1.6000 8.0000 0.0070 Y 1368.279648 0 0.8860 6249 | 23/41
91 h-m-p 1.6000 8.0000 0.0011 ++ 1368.279633 m 8.0000 6311 | 23/41
92 h-m-p 1.1771 8.0000 0.0073 -Y 1368.279633 0 0.0551 6374 | 23/41
93 h-m-p 0.0585 8.0000 0.0069 Y 1368.279633 0 0.1189 6436 | 23/41
94 h-m-p 0.1374 8.0000 0.0059 -Y 1368.279633 0 0.0050 6499 | 23/41
95 h-m-p 0.0160 8.0000 0.0062 Y 1368.279633 0 0.0025 6561 | 23/41
96 h-m-p 0.0160 8.0000 0.0058 C 1368.279633 0 0.0151 6623 | 23/41
97 h-m-p 0.0160 8.0000 0.0059 -------------.. | 23/41
98 h-m-p 0.0000 0.0117 1.0186 C 1368.279630 0 0.0000 6758 | 23/41
99 h-m-p 0.0000 0.0206 0.4496 C 1368.279629 0 0.0000 6820 | 23/41
100 h-m-p 0.0001 0.0698 0.1553 Y 1368.279628 0 0.0000 6882 | 23/41
101 h-m-p 0.0013 0.6702 0.0630 -C 1368.279628 0 0.0001 6945 | 23/41
102 h-m-p 0.0006 0.3211 0.0584 --C 1368.279628 0 0.0000 7009 | 23/41
103 h-m-p 0.0011 0.5636 0.0410 --C 1368.279628 0 0.0000 7073 | 23/41
104 h-m-p 0.0026 1.3172 0.0174 --C 1368.279628 0 0.0001 7137 | 23/41
105 h-m-p 0.0059 2.9737 0.0086 --------C 1368.279628 0 0.0000 7207 | 23/41
106 h-m-p 0.0029 1.4731 0.0063 -C 1368.279628 0 0.0002 7270 | 23/41
107 h-m-p 0.0160 8.0000 0.0009 -----Y 1368.279628 0 0.0000 7337
Out..
lnL = -1368.279628
7338 lfun, 80718 eigenQcodon, 2788440 P(t)
end of tree file.
Time used: 25:40
Model 8: beta&w>1
TREE # 1
(24, 9, ((15, 7, 20, 11), (22, 12, 28, 23)), (((19, 8), 3, 1, 6, 27, 16, 17), 14, 13, 2, 21, (4, 26), 25, (10, 29), 18, 30, 5)); MP score: 33
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
35
0.085643 0.098899 0.052257 0.086409 0.076918 0.067455 0.099331 0.086743 0.102656 0.069522 0.047222 0.015624 0.042291 0.037908 0.010066 0.087828 0.044857 0.075574 0.018273 0.096841 0.097219 0.016462 0.044132 0.074656 0.026969 0.068269 0.098806 0.060869 0.082188 0.085580 0.030393 0.066973 0.105236 0.096816 0.027756 0.096814 0.092785 0.083431 7.719860 0.900000 1.197951 1.491320 1.300000
ntime & nrate & np: 38 2 43
Bounds (np=43):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 2.646361
np = 43
lnL0 = -1849.802887
Iterating by ming2
Initial: fx= 1849.802887
x= 0.08564 0.09890 0.05226 0.08641 0.07692 0.06746 0.09933 0.08674 0.10266 0.06952 0.04722 0.01562 0.04229 0.03791 0.01007 0.08783 0.04486 0.07557 0.01827 0.09684 0.09722 0.01646 0.04413 0.07466 0.02697 0.06827 0.09881 0.06087 0.08219 0.08558 0.03039 0.06697 0.10524 0.09682 0.02776 0.09681 0.09278 0.08343 7.71986 0.90000 1.19795 1.49132 1.30000
1 h-m-p 0.0000 0.0001 968.6976 ++ 1761.486353 m 0.0001 91 | 1/43
2 h-m-p 0.0000 0.0000 62237.3535 ++ 1757.101750 m 0.0000 180 | 2/43
3 h-m-p 0.0000 0.0000 6718.2844 ++ 1746.232030 m 0.0000 268 | 3/43
4 h-m-p 0.0000 0.0000 3350.1583 ++ 1694.410166 m 0.0000 355 | 4/43
5 h-m-p 0.0000 0.0001 1409.7742 ++ 1629.048503 m 0.0001 441 | 5/43
6 h-m-p 0.0000 0.0000 3948.7017 ++ 1621.390667 m 0.0000 526 | 6/43
7 h-m-p 0.0000 0.0000 1469.3981 ++ 1614.620641 m 0.0000 610 | 7/43
8 h-m-p 0.0000 0.0001 1507.1844 ++ 1531.132739 m 0.0001 693 | 8/43
9 h-m-p 0.0000 0.0000 3164.3955 ++ 1507.358154 m 0.0000 775 | 9/43
10 h-m-p 0.0000 0.0000 67033.2554 ++ 1507.047214 m 0.0000 856 | 10/43
11 h-m-p 0.0000 0.0000 10019.4865 ++ 1502.606045 m 0.0000 936 | 11/43
12 h-m-p 0.0000 0.0000 1644.4669 ++ 1500.225976 m 0.0000 1015 | 12/43
13 h-m-p 0.0000 0.0000 10711.5262 ++ 1486.082640 m 0.0000 1093 | 13/43
14 h-m-p 0.0000 0.0000 88918.7518 ++ 1480.249824 m 0.0000 1170 | 14/43
15 h-m-p 0.0000 0.0000 6357.2759 ++ 1463.987642 m 0.0000 1246 | 15/43
16 h-m-p 0.0000 0.0000 389110.9882 ++ 1459.541089 m 0.0000 1321 | 16/43
17 h-m-p 0.0000 0.0000 6831.7131 ++ 1459.216429 m 0.0000 1395 | 17/43
18 h-m-p 0.0000 0.0000 28314.6991 ++ 1445.203897 m 0.0000 1468 | 18/43
19 h-m-p 0.0000 0.0000 7520.6577 ++ 1444.749894 m 0.0000 1540 | 19/43
20 h-m-p 0.0000 0.0000 8203.2566 ++ 1444.272527 m 0.0000 1611 | 20/43
21 h-m-p 0.0000 0.0000 3105.9450 ++ 1442.748273 m 0.0000 1681 | 21/43
22 h-m-p 0.0000 0.0000 2422.9767 ++ 1442.698420 m 0.0000 1750 | 22/43
23 h-m-p 0.0000 0.0000 1006.7545 ++ 1442.236054 m 0.0000 1818 | 23/43
24 h-m-p 0.0000 0.0002 391.7758 ++CCYCCC 1417.457127 5 0.0002 1897 | 23/43
25 h-m-p 0.0000 0.0000 263.8205 +YYYCCC 1415.662555 5 0.0000 1971 | 23/43
26 h-m-p 0.0000 0.0000 700.2782 +YYYYCC 1413.826231 5 0.0000 2044 | 23/43
27 h-m-p 0.0000 0.0001 229.0812 +YYYYCC 1411.863150 5 0.0000 2117 | 23/43
28 h-m-p 0.0000 0.0000 301.6893 +YYCYC 1410.359316 4 0.0000 2189 | 23/43
29 h-m-p 0.0000 0.0000 359.9246 YCYCCC 1409.846423 5 0.0000 2263 | 23/43
30 h-m-p 0.0000 0.0000 135.7236 CCCC 1409.767149 3 0.0000 2335 | 23/43
31 h-m-p 0.0000 0.0002 42.4518 +YYCCC 1409.494795 4 0.0001 2408 | 23/43
32 h-m-p 0.0001 0.0039 62.5012 +++ 1400.026823 m 0.0039 2475 | 23/43
33 h-m-p 0.0000 0.0001 1859.9261 YCCCCC 1398.162942 5 0.0000 2550 | 23/43
34 h-m-p 0.0003 0.0015 56.9599 +YYYCCC 1395.403092 5 0.0011 2624 | 23/43
35 h-m-p 0.0007 0.0058 82.7574 ++ 1378.561441 m 0.0058 2690 | 24/43
36 h-m-p 0.0014 0.0070 11.9874 YCCCC 1377.746323 4 0.0030 2763 | 23/43
37 h-m-p 0.0024 0.0163 15.5250 CYC 1377.665063 2 0.0008 2831 | 23/43
38 h-m-p 0.0006 0.0078 21.6103 ++ 1376.737300 m 0.0078 2897 | 23/43
39 h-m-p 0.0000 0.0000 8.0364
h-m-p: 1.32316015e-19 6.61580075e-19 8.03636649e+00 1376.737300
.. | 23/43
40 h-m-p 0.0000 0.0001 4034.7715 YYCYCCC 1373.401546 6 0.0000 3035 | 23/43
41 h-m-p 0.0000 0.0001 583.6962 YCC 1369.973679 2 0.0000 3104 | 23/43
42 h-m-p 0.0000 0.0001 295.0842 CCC 1369.204913 2 0.0000 3174
QuantileBeta(0.15, 0.00496, 1.84192) = 4.197804e-162 2000 rounds
| 23/43
43 h-m-p 0.0000 0.0001 237.1239 YCYCCC 1368.749932 5 0.0000 3248
QuantileBeta(0.15, 0.00496, 1.84192) = 9.471316e-162 2000 rounds
| 23/43
44 h-m-p 0.0001 0.0005 57.0684 CCC 1368.612901 2 0.0001 3318
QuantileBeta(0.15, 0.00498, 1.84192) = 3.714588e-161 2000 rounds
| 23/43
45 h-m-p 0.0001 0.0003 79.0530 YCC 1368.557832 2 0.0000 3387
QuantileBeta(0.15, 0.00499, 1.84192) = 8.601460e-161 2000 rounds
| 23/43
46 h-m-p 0.0000 0.0010 82.4213 CCC 1368.500934 2 0.0000 3457 | 23/43
47 h-m-p 0.0001 0.0005 22.9791 CC 1368.496342 1 0.0000 3525 | 23/43
48 h-m-p 0.0000 0.0024 16.2427 YC 1368.490426 1 0.0001 3592 | 23/43
49 h-m-p 0.0001 0.0020 18.1743 YC 1368.488084 1 0.0000 3659 | 23/43
50 h-m-p 0.0000 0.0016 18.6146 CC 1368.485795 1 0.0000 3727 | 23/43
51 h-m-p 0.0003 0.0033 2.9005 -C 1368.485732 0 0.0000 3794 | 23/43
52 h-m-p 0.0001 0.0324 0.7820 Y 1368.485720 0 0.0000 3860 | 23/43
53 h-m-p 0.0001 0.0497 0.6866 +C 1368.485625 0 0.0004 3927 | 23/43
54 h-m-p 0.0000 0.0126 16.5206 ++++YC 1368.460655 1 0.0042 3998 | 23/43
55 h-m-p 0.0000 0.0000 3938.8769 ++ 1368.388017 m 0.0000 4064 | 23/43
56 h-m-p -0.0000 -0.0000 8.3617
h-m-p: -0.00000000e+00 -0.00000000e+00 8.36174875e+00 1368.388017
.. | 23/43
57 h-m-p 0.0000 0.0001 129.8413 CYCCC 1368.197601 4 0.0000 4200 | 23/43
58 h-m-p 0.0001 0.0003 34.6702 C 1368.188608 0 0.0000 4266 | 23/43
59 h-m-p 0.0000 0.0003 17.1131 YC 1368.185650 1 0.0000 4333 | 23/43
60 h-m-p 0.0000 0.0001 7.5270 ++ 1368.183825 m 0.0001 4399 | 24/43
61 h-m-p 0.0001 0.0017 7.3268 CC 1368.183473 1 0.0000 4467 | 24/43
62 h-m-p 0.0000 0.0157 6.4607 YC 1368.182814 1 0.0001 4533 | 24/43
63 h-m-p 0.0001 0.0107 4.8580 C 1368.182332 0 0.0001 4598 | 24/43
64 h-m-p 0.0000 0.0026 9.2391 CC 1368.182161 1 0.0000 4665 | 24/43
65 h-m-p 0.0001 0.0097 2.1909 YC 1368.181965 1 0.0001 4731 | 24/43
66 h-m-p 0.0001 0.0033 5.2150 YC 1368.181848 1 0.0000 4797 | 24/43
67 h-m-p 0.0002 0.0079 1.0036 -C 1368.181843 0 0.0000 4863 | 24/43
68 h-m-p 0.0000 0.0075 0.5756 +++YC 1368.181496 1 0.0033 4932 | 24/43
69 h-m-p 0.0000 0.0001 33.9018 +YC 1368.181265 1 0.0000 4999 | 24/43
70 h-m-p 0.0000 0.0001 11.2988 Y 1368.181231 0 0.0000 5064 | 24/43
71 h-m-p 0.0088 0.2126 0.0204 ---C 1368.181231 0 0.0000 5132 | 24/43
72 h-m-p 0.0030 1.5021 0.0021 +++YC 1368.181107 1 0.3425 5201 | 24/43
73 h-m-p 0.0000 0.0001 18.6384 YC 1368.181052 1 0.0000 5267 | 24/43
74 h-m-p 0.0984 1.6093 0.0033 -----Y 1368.181052 0 0.0000 5337 | 24/43
75 h-m-p 0.0014 0.6765 0.0036 ++++C 1368.181039 0 0.3202 5406 | 24/43
76 h-m-p 0.2610 1.3052 0.0012 ++ 1368.181031 m 1.3052 5471 | 25/43
77 h-m-p 0.4967 8.0000 0.0030 Y 1368.181029 0 1.2250 5536 | 25/43
78 h-m-p 1.6000 8.0000 0.0013 Y 1368.181028 0 3.4489 5600 | 25/43
79 h-m-p 1.6000 8.0000 0.0003 Y 1368.181028 0 1.1493 5664 | 25/43
80 h-m-p 1.6000 8.0000 0.0000 Y 1368.181028 0 1.0021 5728 | 25/43
81 h-m-p 1.6000 8.0000 0.0000 ---Y 1368.181028 0 0.0063 5795
Out..
lnL = -1368.181028
5796 lfun, 69552 eigenQcodon, 2422728 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -1381.882572 S = -1342.337952 -63.282505
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 75 patterns 43:05
did 20 / 75 patterns 43:05
did 30 / 75 patterns 43:06
did 40 / 75 patterns 43:06
did 50 / 75 patterns 43:06
did 60 / 75 patterns 43:06
did 70 / 75 patterns 43:07
did 75 / 75 patterns 43:07end of tree file.
Time used: 43:07
The loglikelihoods for models M1, M2, M7 and M8 are -1368.181027 -1368.181027 -1368.279628 -1368.181028 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
N09_1627B_nsp5_VIPR_ALG4_ARB07605_1_10190_11098_1_2016_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
N14_nsp5_VIPR_ALG4_89515540_10079_10987_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
HKU1_human_USA_HKU1_5_2009_nsp5_VIPR_ALG4_545299228_10228_11136_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
N19_nsp5_VIPR_ALG4_89515414_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
HKU1_human_USA_HKU1_15_2009_nsp5_VIPR_ALG4_545299268_10000_10908_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
N09_1663B_nsp5_VIPR_ALG4_ARB07596_1_9758_10666_1_2016_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
N25_nsp5_VIPR_ALG4_89515468_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCR
HKU1_human_USA_HKU1_10_2010_nsp5_VIPR_ALG4_545299238_10138_11046_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
BJ01_p9_nsp5_VIPR_ALG4_1002824425_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
N6_nsp5_VIPR_ALG4_89515486_9839_10747_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
UNKNOWN_AY884001_nsp5_VIPR_ALG4_62198465_10112_11020_1_NA_NA_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCR
N17_nsp5_VIPR_ALG4_89515567_10082_10990_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCR
N13_nsp5_VIPR_ALG4_89515531_10049_10957_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
N10_nsp5_VIPR_ALG4_89515513_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
N08_87_nsp5_VIPR_ALG4_ARB07436_1_10182_11090_1_2016_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCR
HKU1_human_USA_HKU1_13_2010_nsp5_VIPR_ALG4_545299258_10288_11196_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
HKU1_human_USA_HKU1_12_2010_nsp5_VIPR_ALG4_545299278_10288_11196_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
N9_nsp5_VIPR_ALG4_89515504_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
HKU1_human_USA_HKU1_18_2010_nsp5_VIPR_ALG4_530291049_10243_11151_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
SI17244_nsp5_VIPR_ALG4_AYN64559_1_10108_11016_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCR
N18_nsp5_VIPR_ALG4_89515576_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
N16_nsp5_VIPR_ALG4_89515558_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCR
N21_nsp5_VIPR_ALG4_89515432_10112_11020_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCR
BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
N23_nsp5_VIPR_ALG4_89515450_10094_11002_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
N3_nsp5_VIPR_ALG4_89515477_10202_11110_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
HKU1_human_USA_HKU1_11_2009_nsp5_VIPR_ALG4_545299248_10048_10956_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
N20_nsp5_VIPR_ALG4_89515423_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCR
N7_nsp5_VIPR_ALG4_89515495_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
Caen1_nsp5_VIPR_ALG4_306569685_10172_11080_1_2005_03_04_France_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCR
****************:*************************** ***************
N09_1627B_nsp5_VIPR_ALG4_ARB07605_1_10190_11098_1_2016_USA_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
N14_nsp5_VIPR_ALG4_89515540_10079_10987_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
HKU1_human_USA_HKU1_5_2009_nsp5_VIPR_ALG4_545299228_10228_11136_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
N19_nsp5_VIPR_ALG4_89515414_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
HKU1_human_USA_HKU1_15_2009_nsp5_VIPR_ALG4_545299268_10000_10908_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
N09_1663B_nsp5_VIPR_ALG4_ARB07596_1_9758_10666_1_2016_USA_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
N25_nsp5_VIPR_ALG4_89515468_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNG
HKU1_human_USA_HKU1_10_2010_nsp5_VIPR_ALG4_545299238_10138_11046_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
BJ01_p9_nsp5_VIPR_ALG4_1002824425_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
N6_nsp5_VIPR_ALG4_89515486_9839_10747_1_NA_China_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
UNKNOWN_AY884001_nsp5_VIPR_ALG4_62198465_10112_11020_1_NA_NA_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNG
N17_nsp5_VIPR_ALG4_89515567_10082_10990_1_NA_China_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNG
N13_nsp5_VIPR_ALG4_89515531_10049_10957_1_NA_China_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
N10_nsp5_VIPR_ALG4_89515513_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
N08_87_nsp5_VIPR_ALG4_ARB07436_1_10182_11090_1_2016_USA_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNG
HKU1_human_USA_HKU1_13_2010_nsp5_VIPR_ALG4_545299258_10288_11196_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
HKU1_human_USA_HKU1_12_2010_nsp5_VIPR_ALG4_545299278_10288_11196_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
N9_nsp5_VIPR_ALG4_89515504_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
HKU1_human_USA_HKU1_18_2010_nsp5_VIPR_ALG4_530291049_10243_11151_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
SI17244_nsp5_VIPR_ALG4_AYN64559_1_10108_11016_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNG
N18_nsp5_VIPR_ALG4_89515576_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
N16_nsp5_VIPR_ALG4_89515558_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNG
N21_nsp5_VIPR_ALG4_89515432_10112_11020_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNG
BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
N23_nsp5_VIPR_ALG4_89515450_10094_11002_1_NA_China_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
N3_nsp5_VIPR_ALG4_89515477_10202_11110_1_NA_China_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
HKU1_human_USA_HKU1_11_2009_nsp5_VIPR_ALG4_545299248_10048_10956_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
N20_nsp5_VIPR_ALG4_89515423_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNG
N7_nsp5_VIPR_ALG4_89515495_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
Caen1_nsp5_VIPR_ALG4_306569685_10172_11080_1_2005_03_04_France_Human_Human_coronavirus_HKU1 VTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNG
******************************************** ***************
N09_1627B_nsp5_VIPR_ALG4_ARB07605_1_10190_11098_1_2016_USA_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N14_nsp5_VIPR_ALG4_89515540_10079_10987_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
HKU1_human_USA_HKU1_5_2009_nsp5_VIPR_ALG4_545299228_10228_11136_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N19_nsp5_VIPR_ALG4_89515414_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
HKU1_human_USA_HKU1_15_2009_nsp5_VIPR_ALG4_545299268_10000_10908_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N09_1663B_nsp5_VIPR_ALG4_ARB07596_1_9758_10666_1_2016_USA_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N25_nsp5_VIPR_ALG4_89515468_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
HKU1_human_USA_HKU1_10_2010_nsp5_VIPR_ALG4_545299238_10138_11046_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
BJ01_p9_nsp5_VIPR_ALG4_1002824425_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N6_nsp5_VIPR_ALG4_89515486_9839_10747_1_NA_China_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
UNKNOWN_AY884001_nsp5_VIPR_ALG4_62198465_10112_11020_1_NA_NA_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N17_nsp5_VIPR_ALG4_89515567_10082_10990_1_NA_China_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFNGN
N13_nsp5_VIPR_ALG4_89515531_10049_10957_1_NA_China_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N10_nsp5_VIPR_ALG4_89515513_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N08_87_nsp5_VIPR_ALG4_ARB07436_1_10182_11090_1_2016_USA_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
HKU1_human_USA_HKU1_13_2010_nsp5_VIPR_ALG4_545299258_10288_11196_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
HKU1_human_USA_HKU1_12_2010_nsp5_VIPR_ALG4_545299278_10288_11196_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N9_nsp5_VIPR_ALG4_89515504_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
HKU1_human_USA_HKU1_18_2010_nsp5_VIPR_ALG4_530291049_10243_11151_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
SI17244_nsp5_VIPR_ALG4_AYN64559_1_10108_11016_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N18_nsp5_VIPR_ALG4_89515576_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N16_nsp5_VIPR_ALG4_89515558_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFNGN
N21_nsp5_VIPR_ALG4_89515432_10112_11020_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFNGN
BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N23_nsp5_VIPR_ALG4_89515450_10094_11002_1_NA_China_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N3_nsp5_VIPR_ALG4_89515477_10202_11110_1_NA_China_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
HKU1_human_USA_HKU1_11_2009_nsp5_VIPR_ALG4_545299248_10048_10956_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
N20_nsp5_VIPR_ALG4_89515423_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFNGN
N7_nsp5_VIPR_ALG4_89515495_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
Caen1_nsp5_VIPR_ALG4_306569685_10172_11080_1_2005_03_04_France_Human_Human_coronavirus_HKU1 RPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGN
*********************************************************.**
N09_1627B_nsp5_VIPR_ALG4_ARB07605_1_10190_11098_1_2016_USA_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
N14_nsp5_VIPR_ALG4_89515540_10079_10987_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
HKU1_human_USA_HKU1_5_2009_nsp5_VIPR_ALG4_545299228_10228_11136_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
N19_nsp5_VIPR_ALG4_89515414_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
HKU1_human_USA_HKU1_15_2009_nsp5_VIPR_ALG4_545299268_10000_10908_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
N09_1663B_nsp5_VIPR_ALG4_ARB07596_1_9758_10666_1_2016_USA_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
N25_nsp5_VIPR_ALG4_89515468_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFS
HKU1_human_USA_HKU1_10_2010_nsp5_VIPR_ALG4_545299238_10138_11046_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
BJ01_p9_nsp5_VIPR_ALG4_1002824425_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
N6_nsp5_VIPR_ALG4_89515486_9839_10747_1_NA_China_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
UNKNOWN_AY884001_nsp5_VIPR_ALG4_62198465_10112_11020_1_NA_NA_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFS
N17_nsp5_VIPR_ALG4_89515567_10082_10990_1_NA_China_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFS
N13_nsp5_VIPR_ALG4_89515531_10049_10957_1_NA_China_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
N10_nsp5_VIPR_ALG4_89515513_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
N08_87_nsp5_VIPR_ALG4_ARB07436_1_10182_11090_1_2016_USA_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFS
HKU1_human_USA_HKU1_13_2010_nsp5_VIPR_ALG4_545299258_10288_11196_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
HKU1_human_USA_HKU1_12_2010_nsp5_VIPR_ALG4_545299278_10288_11196_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
N9_nsp5_VIPR_ALG4_89515504_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYIQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
HKU1_human_USA_HKU1_18_2010_nsp5_VIPR_ALG4_530291049_10243_11151_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
SI17244_nsp5_VIPR_ALG4_AYN64559_1_10108_11016_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFS
N18_nsp5_VIPR_ALG4_89515576_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
N16_nsp5_VIPR_ALG4_89515558_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFS
N21_nsp5_VIPR_ALG4_89515432_10112_11020_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFS
BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
N23_nsp5_VIPR_ALG4_89515450_10094_11002_1_NA_China_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
N3_nsp5_VIPR_ALG4_89515477_10202_11110_1_NA_China_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
HKU1_human_USA_HKU1_11_2009_nsp5_VIPR_ALG4_545299248_10048_10956_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
N20_nsp5_VIPR_ALG4_89515423_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFS
N7_nsp5_VIPR_ALG4_89515495_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
Caen1_nsp5_VIPR_ALG4_306569685_10172_11080_1_2005_03_04_France_Human_Human_coronavirus_HKU1 FYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFS
******************:*************************** ********:****
N09_1627B_nsp5_VIPR_ALG4_ARB07605_1_10190_11098_1_2016_USA_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N14_nsp5_VIPR_ALG4_89515540_10079_10987_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
HKU1_human_USA_HKU1_5_2009_nsp5_VIPR_ALG4_545299228_10228_11136_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N19_nsp5_VIPR_ALG4_89515414_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
HKU1_human_USA_HKU1_15_2009_nsp5_VIPR_ALG4_545299268_10000_10908_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N09_1663B_nsp5_VIPR_ALG4_ARB07596_1_9758_10666_1_2016_USA_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N25_nsp5_VIPR_ALG4_89515468_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
HKU1_human_USA_HKU1_10_2010_nsp5_VIPR_ALG4_545299238_10138_11046_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
BJ01_p9_nsp5_VIPR_ALG4_1002824425_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N6_nsp5_VIPR_ALG4_89515486_9839_10747_1_NA_China_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
UNKNOWN_AY884001_nsp5_VIPR_ALG4_62198465_10112_11020_1_NA_NA_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N17_nsp5_VIPR_ALG4_89515567_10082_10990_1_NA_China_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIEILLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N13_nsp5_VIPR_ALG4_89515531_10049_10957_1_NA_China_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N10_nsp5_VIPR_ALG4_89515513_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N08_87_nsp5_VIPR_ALG4_ARB07436_1_10182_11090_1_2016_USA_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
HKU1_human_USA_HKU1_13_2010_nsp5_VIPR_ALG4_545299258_10288_11196_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
HKU1_human_USA_HKU1_12_2010_nsp5_VIPR_ALG4_545299278_10288_11196_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N9_nsp5_VIPR_ALG4_89515504_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
HKU1_human_USA_HKU1_18_2010_nsp5_VIPR_ALG4_530291049_10243_11151_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
SI17244_nsp5_VIPR_ALG4_AYN64559_1_10108_11016_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N18_nsp5_VIPR_ALG4_89515576_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N16_nsp5_VIPR_ALG4_89515558_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N21_nsp5_VIPR_ALG4_89515432_10112_11020_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N23_nsp5_VIPR_ALG4_89515450_10094_11002_1_NA_China_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N3_nsp5_VIPR_ALG4_89515477_10202_11110_1_NA_China_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
HKU1_human_USA_HKU1_11_2009_nsp5_VIPR_ALG4_545299248_10048_10956_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N20_nsp5_VIPR_ALG4_89515423_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
N7_nsp5_VIPR_ALG4_89515495_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
Caen1_nsp5_VIPR_ALG4_306569685_10172_11080_1_2005_03_04_France_Human_Human_coronavirus_HKU1 QVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGV
******************** ***************************************
N09_1627B_nsp5_VIPR_ALG4_ARB07605_1_10190_11098_1_2016_USA_Human_Human_coronavirus_HKU1 KLQ
N14_nsp5_VIPR_ALG4_89515540_10079_10987_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 KLQ
HKU1_human_USA_HKU1_5_2009_nsp5_VIPR_ALG4_545299228_10228_11136_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 KLQ
N19_nsp5_VIPR_ALG4_89515414_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 KLQ
HKU1_human_USA_HKU1_15_2009_nsp5_VIPR_ALG4_545299268_10000_10908_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 KLQ
N09_1663B_nsp5_VIPR_ALG4_ARB07596_1_9758_10666_1_2016_USA_Human_Human_coronavirus_HKU1 KLQ
N25_nsp5_VIPR_ALG4_89515468_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 KLQ
HKU1_human_USA_HKU1_10_2010_nsp5_VIPR_ALG4_545299238_10138_11046_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 KLQ
BJ01_p9_nsp5_VIPR_ALG4_1002824425_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 KLQ
N6_nsp5_VIPR_ALG4_89515486_9839_10747_1_NA_China_Unknown_Human_coronavirus_HKU1 KLQ
UNKNOWN_AY884001_nsp5_VIPR_ALG4_62198465_10112_11020_1_NA_NA_Unknown_Human_coronavirus_HKU1 KLQ
N17_nsp5_VIPR_ALG4_89515567_10082_10990_1_NA_China_Unknown_Human_coronavirus_HKU1 KLQ
N13_nsp5_VIPR_ALG4_89515531_10049_10957_1_NA_China_Unknown_Human_coronavirus_HKU1 KLQ
N10_nsp5_VIPR_ALG4_89515513_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 KLQ
N08_87_nsp5_VIPR_ALG4_ARB07436_1_10182_11090_1_2016_USA_Human_Human_coronavirus_HKU1 KLQ
HKU1_human_USA_HKU1_13_2010_nsp5_VIPR_ALG4_545299258_10288_11196_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 KLQ
HKU1_human_USA_HKU1_12_2010_nsp5_VIPR_ALG4_545299278_10288_11196_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 KLQ
N9_nsp5_VIPR_ALG4_89515504_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 KLQ
HKU1_human_USA_HKU1_18_2010_nsp5_VIPR_ALG4_530291049_10243_11151_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 KLQ
SI17244_nsp5_VIPR_ALG4_AYN64559_1_10108_11016_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 KLQ
N18_nsp5_VIPR_ALG4_89515576_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 KLQ
N16_nsp5_VIPR_ALG4_89515558_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 KLQ
N21_nsp5_VIPR_ALG4_89515432_10112_11020_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 KLQ
BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 KLQ
N23_nsp5_VIPR_ALG4_89515450_10094_11002_1_NA_China_Unknown_Human_coronavirus_HKU1 KLQ
N3_nsp5_VIPR_ALG4_89515477_10202_11110_1_NA_China_Unknown_Human_coronavirus_HKU1 KLQ
HKU1_human_USA_HKU1_11_2009_nsp5_VIPR_ALG4_545299248_10048_10956_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 KLQ
N20_nsp5_VIPR_ALG4_89515423_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 KLQ
N7_nsp5_VIPR_ALG4_89515495_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 KLQ
Caen1_nsp5_VIPR_ALG4_306569685_10172_11080_1_2005_03_04_France_Human_Human_coronavirus_HKU1 KLQ
***
>N09_1627B_nsp5_VIPR_ALG4_ARB07605_1_10190_11098_1_2016_USA_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACCTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N14_nsp5_VIPR_ALG4_89515540_10079_10987_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >HKU1_human_USA_HKU1_5_2009_nsp5_VIPR_ALG4_545299228_10228_11136_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACCTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N19_nsp5_VIPR_ALG4_89515414_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTACGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >HKU1_human_USA_HKU1_15_2009_nsp5_VIPR_ALG4_545299268_10000_10908_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTATACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N09_1663B_nsp5_VIPR_ALG4_ARB07596_1_9758_10666_1_2016_USA_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACCTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N25_nsp5_VIPR_ALG4_89515468_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTTATCCTCTAATATGAATGAACCTGATTATTCTGCCTTATTATGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGGCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTGTTGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTACGTCCAAACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTATTGAAGATTTTAATGTTTGGGCTATGACAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >HKU1_human_USA_HKU1_10_2010_nsp5_VIPR_ALG4_545299238_10138_11046_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTATACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAACGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACCTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >BJ01_p9_nsp5_VIPR_ALG4_1002824425_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAATGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N6_nsp5_VIPR_ALG4_89515486_9839_10747_1_NA_China_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGAATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >UNKNOWN_AY884001_nsp5_VIPR_ALG4_62198465_10112_11020_1_NA_NA_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTTATCCTCTAATATGAATGAACCTGATTATTCTGCCTTATTATGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGGCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTGTTGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTACGTCCAAACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTATTGAAGATTTTAATGTTTGGGCTATGACAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N17_nsp5_VIPR_ALG4_89515567_10082_10990_1_NA_China_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCGCCTACGTCAAAAATTGAACCTTGTTTAGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTTATCCTCTAATATGAATGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTTTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTATACTCCAAAATATACTTTTGGTGTTGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCATATAATGGCCGACCACAAGGAGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCACCAATTAGAGCTCAGTACTGGTTGTCACACTGGTACTGATTTTAATGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGATTATGTCCAAACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTATTGAAGATTTTAATGTTTGGGCTATGACAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAATTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGATGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N13_nsp5_VIPR_ALG4_89515531_10049_10957_1_NA_China_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N10_nsp5_VIPR_ALG4_89515513_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTGTTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCCATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N08_87_nsp5_VIPR_ALG4_ARB07436_1_10182_11090_1_2016_USA_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTTATCCTCTAATATGAATGAACCTGATTATTCTGCCTTATTATGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGGCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTGTTGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTACGTCCAAACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTATTGAAGATTTTAATGTTTGGGCTATGACAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >HKU1_human_USA_HKU1_13_2010_nsp5_VIPR_ALG4_545299258_10288_11196_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACCTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >HKU1_human_USA_HKU1_12_2010_nsp5_VIPR_ALG4_545299278_10288_11196_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACCTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N9_nsp5_VIPR_ALG4_89515504_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATATCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >HKU1_human_USA_HKU1_18_2010_nsp5_VIPR_ALG4_530291049_10243_11151_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTATACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACCTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >SI17244_nsp5_VIPR_ALG4_AYN64559_1_10108_11016_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTTATCCTCTAATATGAATGAACCTGATTATTCTGCCTTATTATGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGGCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTGTTGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTACGTCCAAACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTATTGAAGATTTTAATGTTTGGGCTATGACAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N18_nsp5_VIPR_ALG4_89515576_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N16_nsp5_VIPR_ALG4_89515558_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCGCCTACGTCAAAAATTGAACCTTGTTTAGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTTATCCTCTAATATGAATGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTTTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTATACTCCAAAATATACTTTTGGTGTTGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCATATAATGGCCGACCACAAGGAGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCACCAATTAGAGCTCAGTACTGGTTGTCACACTGGTACTGATTTTAATGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAAACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTATTGAAGATTTTAATGTTTGGGCTATGACAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGATGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N21_nsp5_VIPR_ALG4_89515432_10112_11020_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCGCCTACGTCAAAAATTGAACCTTGTTTAGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTTATCCTCTAATATGAATGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTTTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTATACTCCAAAATATACTTTTGGTGTTGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCATATAATGGCCGACCACAAGGAGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCACCAATTAGAGCTCAGTACTGGTTGTCACACTGGTACTGATTTTAATGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAAACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTATTGAAGATTTTAATGTTTGGGCTATGACAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGATGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAATGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N23_nsp5_VIPR_ALG4_89515450_10094_11002_1_NA_China_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N3_nsp5_VIPR_ALG4_89515477_10202_11110_1_NA_China_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGATCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTACGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTCTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >HKU1_human_USA_HKU1_11_2009_nsp5_VIPR_ALG4_545299248_10048_10956_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACCTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N20_nsp5_VIPR_ALG4_89515423_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCGCCTACGTCAAAAATTGAACCTTGTTTAGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTTATCCTCTAATATGAATGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTTTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTATACTCCAAAATATACTTTTGGTGTTGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCATATAATGGCCGACCACAAGGAGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCACCAATTAGAGCTCAGTACTGGTTGTCACACTGGTACTGATTTTAATGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAAACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTATTGAAGATTTTAATGTTTGGGCTATGACAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGATGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >N7_nsp5_VIPR_ALG4_89515495_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGAATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTCTCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA >Caen1_nsp5_VIPR_ALG4_306569685_10172_11080_1_2005_03_04_France_Human_Human_coronavirus_HKU1 TCAGGTATTGTAAAGATGGTATCTCCTACGTCAAAAATTGAACCTTGTATTGTTAGTGTTACTTATGGTAGTATGACTTTGAATGGTTTATGGTTAGATGACAAAGTTTATTGTCCTCGTCATGTTATATGTTCATCCTCTAATATGAACGAACCTGATTATTCTGCCTTATTGTGTAGAGTTACTCTAGGTGATTTTACTATAATGTCTGGTCGGATGAGTTTAACAGTTGTGTCTTACCAGATGCAGGGCTGTCAACTTGTTTTGACAGTATCTTTACAAAATCCTTACACTCCAAAATATACTTTTGGTAATGTTAAACCTGGTGAAACTTTTACTGTTTTAGCTGCGTATAATGGCCGACCACAAGGGGCATTTCATGTTACTATGCGTAGTAGTTATACTATTAAAGGTTCTTTTTTGTGTGGGTCATGTGGATCTGTTGGTTATGTATTAACAGGTGATAGTGTTAAGTTTGTATATATGCATCAATTAGAGCTCAGTACTGGTTGTCACACTGGCACTGATTTTACTGGTAATTTTTATGGTCCATATAGAGATGCTCAAGTTGTACAGTTGCCAGTTAAGGACTATGTCCAGACTGTTAATGTTATTGCTTGGCTCTATGCAGCTATACTTAATAATTGTGCTTGGTTTGTACAAAATGATGTTTGTTCTACTGAAGATTTTAATGTTTGGGCTATGGCAAATGGTTTTAGCCAAGTAAAAGCAGATCTTGTTTTAGATGCTTTGGCTTCAATGACAGGTGTTTCTATTGAAACTTTATTGGCTGCTATTAAGCGTCTATATATGGGATTTCAAGGTCGTCAAATACTAGGAAGTTGTACTTTTGAAGATGAATTGGCACCTTCTGACGTTTATCAACAATTGGCTGGTGTTAAATTGCAA
>N09_1627B_nsp5_VIPR_ALG4_ARB07605_1_10190_11098_1_2016_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N14_nsp5_VIPR_ALG4_89515540_10079_10987_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >HKU1_human_USA_HKU1_5_2009_nsp5_VIPR_ALG4_545299228_10228_11136_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N19_nsp5_VIPR_ALG4_89515414_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >HKU1_human_USA_HKU1_15_2009_nsp5_VIPR_ALG4_545299268_10000_10908_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N09_1663B_nsp5_VIPR_ALG4_ARB07596_1_9758_10666_1_2016_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N25_nsp5_VIPR_ALG4_89515468_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >HKU1_human_USA_HKU1_10_2010_nsp5_VIPR_ALG4_545299238_10138_11046_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >BJ01_p9_nsp5_VIPR_ALG4_1002824425_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N6_nsp5_VIPR_ALG4_89515486_9839_10747_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >UNKNOWN_AY884001_nsp5_VIPR_ALG4_62198465_10112_11020_1_NA_NA_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N17_nsp5_VIPR_ALG4_89515567_10082_10990_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDALASMTGVSIEILLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N13_nsp5_VIPR_ALG4_89515531_10049_10957_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N10_nsp5_VIPR_ALG4_89515513_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N08_87_nsp5_VIPR_ALG4_ARB07436_1_10182_11090_1_2016_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >HKU1_human_USA_HKU1_13_2010_nsp5_VIPR_ALG4_545299258_10288_11196_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >HKU1_human_USA_HKU1_12_2010_nsp5_VIPR_ALG4_545299278_10288_11196_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N9_nsp5_VIPR_ALG4_89515504_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYIQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >HKU1_human_USA_HKU1_18_2010_nsp5_VIPR_ALG4_530291049_10243_11151_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >SI17244_nsp5_VIPR_ALG4_AYN64559_1_10108_11016_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N18_nsp5_VIPR_ALG4_89515576_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N16_nsp5_VIPR_ALG4_89515558_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N21_nsp5_VIPR_ALG4_89515432_10112_11020_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N23_nsp5_VIPR_ALG4_89515450_10094_11002_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N3_nsp5_VIPR_ALG4_89515477_10202_11110_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >HKU1_human_USA_HKU1_11_2009_nsp5_VIPR_ALG4_545299248_10048_10956_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N20_nsp5_VIPR_ALG4_89515423_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCLVSVTYGSMTLNGLWLDDKVYCPRHVICLSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGVVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFNGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSIEDFNVWAMTNGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >N7_nsp5_VIPR_ALG4_89515495_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ >Caen1_nsp5_VIPR_ALG4_306569685_10172_11080_1_2005_03_04_France_Human_Human_coronavirus_HKU1 SGIVKMVSPTSKIEPCIVSVTYGSMTLNGLWLDDKVYCPRHVICSSSNMNEPDYSALLCRVTLGDFTIMSGRMSLTVVSYQMQGCQLVLTVSLQNPYTPKYTFGNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCSTEDFNVWAMANGFSQVKADLVLDALASMTGVSIETLLAAIKRLYMGFQGRQILGSCTFEDELAPSDVYQQLAGVKLQ
Reading sequence file /data//pss_subsets/BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result/original_alignment/codeml/fasta/BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result.1
Found 30 sequences of length 909
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 0.8%
Found 23 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 2
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 21 polymorphic sites
**p-Value(s)**
----------
NSS: 1.65e-01 (1000 permutations)
Max Chi^2: 6.22e-01 (1000 permutations)
PHI (Permutation): 9.52e-01 (1000 permutations)
PHI (Normal): 8.82e-01
#NEXUS
[ID: 1677689837]
begin taxa;
dimensions ntax=30;
taxlabels
BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_18_2010_nsp5_VIPR_ALG4_530291049_10243_11151_1_2010_01_22_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_5_2009_nsp5_VIPR_ALG4_545299228_10228_11136_1_2009_11_28_USA_Human_Human_coronavirus_HKU1
N08_87_nsp5_VIPR_ALG4_ARB07436_1_10182_11090_1_2016_USA_Human_Human_coronavirus_HKU1
N09_1627B_nsp5_VIPR_ALG4_ARB07605_1_10190_11098_1_2016_USA_Human_Human_coronavirus_HKU1
N09_1663B_nsp5_VIPR_ALG4_ARB07596_1_9758_10666_1_2016_USA_Human_Human_coronavirus_HKU1
N10_nsp5_VIPR_ALG4_89515513_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1
N13_nsp5_VIPR_ALG4_89515531_10049_10957_1_NA_China_Unknown_Human_coronavirus_HKU1
N14_nsp5_VIPR_ALG4_89515540_10079_10987_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1
BJ01_p9_nsp5_VIPR_ALG4_1002824425_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1
N16_nsp5_VIPR_ALG4_89515558_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1
N17_nsp5_VIPR_ALG4_89515567_10082_10990_1_NA_China_Unknown_Human_coronavirus_HKU1
N18_nsp5_VIPR_ALG4_89515576_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1
N19_nsp5_VIPR_ALG4_89515414_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1
N20_nsp5_VIPR_ALG4_89515423_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1
N21_nsp5_VIPR_ALG4_89515432_10112_11020_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1
N23_nsp5_VIPR_ALG4_89515450_10094_11002_1_NA_China_Unknown_Human_coronavirus_HKU1
N25_nsp5_VIPR_ALG4_89515468_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1
N3_nsp5_VIPR_ALG4_89515477_10202_11110_1_NA_China_Unknown_Human_coronavirus_HKU1
N6_nsp5_VIPR_ALG4_89515486_9839_10747_1_NA_China_Unknown_Human_coronavirus_HKU1
N7_nsp5_VIPR_ALG4_89515495_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1
N9_nsp5_VIPR_ALG4_89515504_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1
SI17244_nsp5_VIPR_ALG4_AYN64559_1_10108_11016_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1
UNKNOWN_AY884001_nsp5_VIPR_ALG4_62198465_10112_11020_1_NA_NA_Unknown_Human_coronavirus_HKU1
Caen1_nsp5_VIPR_ALG4_306569685_10172_11080_1_2005_03_04_France_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_10_2010_nsp5_VIPR_ALG4_545299238_10138_11046_1_2010_01_16_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_11_2009_nsp5_VIPR_ALG4_545299248_10048_10956_1_2009_12_13_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_13_2010_nsp5_VIPR_ALG4_545299258_10288_11196_1_2010_01_08_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_12_2010_nsp5_VIPR_ALG4_545299278_10288_11196_1_2010_01_09_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_15_2009_nsp5_VIPR_ALG4_545299268_10000_10908_1_2009_12_28_USA_Human_Human_coronavirus_HKU1
;
end;
begin trees;
translate
1 BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1,
2 HKU1_human_USA_HKU1_18_2010_nsp5_VIPR_ALG4_530291049_10243_11151_1_2010_01_22_USA_Human_Human_coronavirus_HKU1,
3 HKU1_human_USA_HKU1_5_2009_nsp5_VIPR_ALG4_545299228_10228_11136_1_2009_11_28_USA_Human_Human_coronavirus_HKU1,
4 N08_87_nsp5_VIPR_ALG4_ARB07436_1_10182_11090_1_2016_USA_Human_Human_coronavirus_HKU1,
5 N09_1627B_nsp5_VIPR_ALG4_ARB07605_1_10190_11098_1_2016_USA_Human_Human_coronavirus_HKU1,
6 N09_1663B_nsp5_VIPR_ALG4_ARB07596_1_9758_10666_1_2016_USA_Human_Human_coronavirus_HKU1,
7 N10_nsp5_VIPR_ALG4_89515513_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1,
8 N13_nsp5_VIPR_ALG4_89515531_10049_10957_1_NA_China_Unknown_Human_coronavirus_HKU1,
9 N14_nsp5_VIPR_ALG4_89515540_10079_10987_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1,
10 BJ01_p9_nsp5_VIPR_ALG4_1002824425_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1,
11 N16_nsp5_VIPR_ALG4_89515558_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1,
12 N17_nsp5_VIPR_ALG4_89515567_10082_10990_1_NA_China_Unknown_Human_coronavirus_HKU1,
13 N18_nsp5_VIPR_ALG4_89515576_10169_11077_1_NA_China_Unknown_Human_coronavirus_HKU1,
14 N19_nsp5_VIPR_ALG4_89515414_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1,
15 N20_nsp5_VIPR_ALG4_89515423_10142_11050_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1,
16 N21_nsp5_VIPR_ALG4_89515432_10112_11020_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1,
17 N23_nsp5_VIPR_ALG4_89515450_10094_11002_1_NA_China_Unknown_Human_coronavirus_HKU1,
18 N25_nsp5_VIPR_ALG4_89515468_10142_11050_1_NA_China_Unknown_Human_coronavirus_HKU1,
19 N3_nsp5_VIPR_ALG4_89515477_10202_11110_1_NA_China_Unknown_Human_coronavirus_HKU1,
20 N6_nsp5_VIPR_ALG4_89515486_9839_10747_1_NA_China_Unknown_Human_coronavirus_HKU1,
21 N7_nsp5_VIPR_ALG4_89515495_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1,
22 N9_nsp5_VIPR_ALG4_89515504_10139_11047_1_NA_China_Unknown_Human_coronavirus_HKU1,
23 SI17244_nsp5_VIPR_ALG4_AYN64559_1_10108_11016_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1,
24 UNKNOWN_AY884001_nsp5_VIPR_ALG4_62198465_10112_11020_1_NA_NA_Unknown_Human_coronavirus_HKU1,
25 Caen1_nsp5_VIPR_ALG4_306569685_10172_11080_1_2005_03_04_France_Human_Human_coronavirus_HKU1,
26 HKU1_human_USA_HKU1_10_2010_nsp5_VIPR_ALG4_545299238_10138_11046_1_2010_01_16_USA_Human_Human_coronavirus_HKU1,
27 HKU1_human_USA_HKU1_11_2009_nsp5_VIPR_ALG4_545299248_10048_10956_1_2009_12_13_USA_Human_Human_coronavirus_HKU1,
28 HKU1_human_USA_HKU1_13_2010_nsp5_VIPR_ALG4_545299258_10288_11196_1_2010_01_08_USA_Human_Human_coronavirus_HKU1,
29 HKU1_human_USA_HKU1_12_2010_nsp5_VIPR_ALG4_545299278_10288_11196_1_2010_01_09_USA_Human_Human_coronavirus_HKU1,
30 HKU1_human_USA_HKU1_15_2009_nsp5_VIPR_ALG4_545299268_10000_10908_1_2009_12_28_USA_Human_Human_coronavirus_HKU1
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:3.144222e-04,10:3.240041e-04,((4:3.125267e-04,18:3.171724e-04,23:3.051822e-04,24:3.140909e-04)0.994:1.576624e-03,(11:3.032793e-04,12:1.165393e-03,15:3.112475e-04,16:3.138120e-04)1.000:5.425505e-03)1.000:3.129877e-03,(((2:3.438730e-04,26:7.592963e-04)0.832:7.080821e-04,3:3.022295e-04,5:3.003694e-04,6:2.939439e-04,27:3.110259e-04,28:3.169084e-04,29:2.918939e-04)0.778:7.561887e-04,7:1.237634e-03,8:3.138394e-04,9:3.046004e-04,13:3.038610e-04,(14:3.427714e-04,19:1.224880e-03)0.806:7.240556e-04,17:3.043714e-04,(20:2.976918e-04,21:3.087462e-04)0.973:7.450981e-04,22:7.458208e-04,25:7.396019e-04,30:7.268966e-04)0.679:7.507689e-04);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:3.144222e-04,10:3.240041e-04,((4:3.125267e-04,18:3.171724e-04,23:3.051822e-04,24:3.140909e-04):1.576624e-03,(11:3.032793e-04,12:1.165393e-03,15:3.112475e-04,16:3.138120e-04):5.425505e-03):3.129877e-03,(((2:3.438730e-04,26:7.592963e-04):7.080821e-04,3:3.022295e-04,5:3.003694e-04,6:2.939439e-04,27:3.110259e-04,28:3.169084e-04,29:2.918939e-04):7.561887e-04,7:1.237634e-03,8:3.138394e-04,9:3.046004e-04,13:3.038610e-04,(14:3.427714e-04,19:1.224880e-03):7.240556e-04,17:3.043714e-04,(20:2.976918e-04,21:3.087462e-04):7.450981e-04,22:7.458208e-04,25:7.396019e-04,30:7.268966e-04):7.507689e-04);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1473.08 -1497.91
2 -1473.03 -1499.90
--------------------------------------
TOTAL -1473.05 -1499.34
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.042163 0.000068 0.027914 0.059576 0.041299 1210.69 1303.25 1.000
r(A<->C){all} 0.102930 0.003094 0.013689 0.212243 0.094306 222.98 260.95 1.000
r(A<->G){all} 0.270458 0.005550 0.128420 0.413899 0.266122 318.33 342.48 1.000
r(A<->T){all} 0.057329 0.000868 0.008573 0.114493 0.052801 391.47 445.72 1.000
r(C<->G){all} 0.040544 0.001557 0.000007 0.120794 0.028896 255.15 344.94 1.000
r(C<->T){all} 0.479918 0.007130 0.318322 0.643048 0.482065 324.79 390.73 1.000
r(G<->T){all} 0.048822 0.000815 0.006895 0.107108 0.043082 635.44 652.10 1.000
pi(A){all} 0.262077 0.000215 0.235155 0.291172 0.261842 879.36 921.92 1.000
pi(C){all} 0.141573 0.000139 0.119448 0.165365 0.141057 740.81 933.71 1.000
pi(G){all} 0.211266 0.000179 0.187157 0.238652 0.211086 996.55 1016.98 1.000
pi(T){all} 0.385084 0.000255 0.356350 0.418785 0.385181 826.24 835.97 1.000
alpha{1,2} 0.861883 0.845009 0.000215 2.658506 0.546564 737.18 993.95 1.000
alpha{3} 1.008901 0.887577 0.001636 2.935658 0.728591 981.39 988.28 1.000
pinvar{all} 0.487807 0.048606 0.053839 0.827892 0.516206 287.23 428.82 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/BJ01_p3_nsp5_VIPR_ALG4_1002824416_10169_11077_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 30 ls = 303
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 13 13 13 13 13 13 | Ser TCT 11 11 11 11 11 11 | Tyr TAT 14 14 14 13 15 14 | Cys TGT 11 11 11 11 11 11
TTC 0 0 0 0 0 0 | TCC 1 1 1 1 1 1 | TAC 2 2 2 3 1 2 | TGC 0 0 0 0 0 0
Leu TTA 10 10 10 10 10 10 | TCA 5 5 5 5 5 5 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 10 10 10 10 10 10 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 4 4 4 4 4 4
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 3 3 3 3 3 | Pro CCT 7 7 7 7 7 7 | His CAT 3 3 3 3 3 3 | Arg CGT 4 4 4 4 4 4
CTC 2 2 2 2 2 2 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 1 | CGC 0 0 0 0 0 0
CTA 3 3 3 3 3 3 | CCA 4 4 4 4 4 4 | Gln CAA 12 12 12 12 12 12 | CGA 1 1 1 1 1 1
CTG 0 0 0 0 0 0 | CCG 0 0 0 0 0 0 | CAG 4 4 4 4 4 4 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 7 7 7 7 7 7 | Thr ACT 17 18 17 18 18 17 | Asn AAT 12 12 12 12 12 12 | Ser AGT 8 8 8 8 8 8
ATC 0 0 0 0 0 0 | ACC 1 0 1 0 0 1 | AAC 1 1 1 1 1 1 | AGC 1 1 1 1 1 1
ATA 4 4 4 4 4 4 | ACA 4 4 4 4 4 4 | Lys AAA 7 7 7 7 7 7 | Arg AGA 2 2 2 2 2 2
Met ATG 11 11 11 11 11 11 | ACG 1 1 1 1 1 1 | AAG 4 4 4 4 4 4 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 22 22 22 22 22 22 | Ala GCT 11 11 11 11 11 11 | Asp GAT 11 11 11 11 11 11 | Gly GGT 17 17 17 17 17 17
GTC 2 2 2 2 2 2 | GCC 1 1 1 1 1 1 | GAC 3 3 3 3 3 3 | GGC 3 3 3 3 3 3
GTA 7 7 7 7 7 7 | GCA 5 5 5 5 5 5 | Glu GAA 7 7 7 7 7 7 | GGA 3 3 3 3 3 3
GTG 1 1 1 1 1 1 | GCG 1 1 1 1 1 1 | GAG 1 1 1 1 1 1 | GGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 13 13 13 13 13 13 | Ser TCT 11 11 11 11 11 10 | Tyr TAT 13 15 14 14 13 15 | Cys TGT 11 11 11 11 11 11
TTC 0 0 0 0 0 0 | TCC 1 1 1 1 1 1 | TAC 3 1 2 2 3 1 | TGC 0 0 0 0 0 0
Leu TTA 12 10 10 10 12 13 | TCA 4 5 5 5 4 4 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 9 10 10 10 9 10 | TCG 0 0 0 0 0 1 | TAG 0 0 0 0 0 0 | Trp TGG 4 4 4 4 4 4
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 3 3 3 3 3 | Pro CCT 7 7 7 7 7 7 | His CAT 3 3 3 3 3 2 | Arg CGT 4 4 4 4 4 4
CTC 2 2 2 2 2 2 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 2 | CGC 0 0 0 0 0 0
CTA 3 3 3 3 3 2 | CCA 4 4 4 4 4 4 | Gln CAA 13 12 12 12 13 13 | CGA 1 1 1 2 1 1
CTG 0 0 0 0 0 0 | CCG 0 0 0 0 0 0 | CAG 3 4 4 4 3 3 | CGG 1 1 1 0 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 8 7 7 7 8 8 | Thr ACT 17 17 18 18 17 15 | Asn AAT 12 11 13 12 12 13 | Ser AGT 8 8 8 8 8 8
ATC 0 0 0 0 0 0 | ACC 0 1 0 0 0 0 | AAC 0 2 0 1 0 0 | AGC 1 1 1 1 1 1
ATA 4 4 4 4 4 4 | ACA 5 4 4 4 5 5 | Lys AAA 7 7 7 7 7 7 | Arg AGA 2 2 2 2 2 2
Met ATG 11 11 11 11 11 11 | ACG 1 1 1 1 1 1 | AAG 4 4 4 4 4 4 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 23 22 22 22 23 23 | Ala GCT 11 11 11 11 11 11 | Asp GAT 11 11 11 11 11 13 | Gly GGT 16 17 17 17 16 18
GTC 2 2 2 2 2 2 | GCC 1 1 1 1 1 1 | GAC 3 3 3 3 3 1 | GGC 3 3 3 3 3 2
GTA 7 7 7 7 7 7 | GCA 4 5 5 5 4 5 | Glu GAA 7 7 7 7 7 7 | GGA 3 3 3 3 3 4
GTG 1 1 1 1 1 1 | GCG 1 1 1 1 1 0 | GAG 1 1 1 1 1 1 | GGG 3 2 2 2 3 1
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 13 13 13 13 13 13 | Ser TCT 11 10 11 11 11 11 | Tyr TAT 14 14 13 14 14 14 | Cys TGT 11 11 11 11 11 11
TTC 0 0 0 0 0 0 | TCC 1 2 1 1 1 1 | TAC 2 2 3 2 2 2 | TGC 0 0 0 0 0 0
Leu TTA 10 10 12 10 10 10 | TCA 5 5 4 5 5 5 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 10 10 9 10 10 10 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 4 4 4 4 4 4
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 3 3 3 3 3 | Pro CCT 7 7 7 7 7 7 | His CAT 3 3 3 3 3 3 | Arg CGT 4 4 4 4 4 4
CTC 2 2 2 2 2 2 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 1 | CGC 0 0 0 0 0 0
CTA 3 3 3 3 3 3 | CCA 4 4 4 4 4 4 | Gln CAA 12 12 13 12 12 12 | CGA 1 1 1 1 1 1
CTG 0 0 0 0 0 0 | CCG 0 0 0 0 0 0 | CAG 4 4 3 4 4 4 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 7 7 8 7 7 7 | Thr ACT 18 18 17 17 17 18 | Asn AAT 12 12 12 12 12 12 | Ser AGT 8 8 8 8 8 8
ATC 0 0 0 0 0 1 | ACC 0 0 0 1 1 0 | AAC 1 1 0 1 1 1 | AGC 1 1 1 1 1 1
ATA 4 4 4 4 4 4 | ACA 4 4 5 4 4 4 | Lys AAA 7 7 7 7 7 7 | Arg AGA 2 2 2 2 2 2
Met ATG 11 11 11 11 11 11 | ACG 1 1 1 1 1 1 | AAG 4 4 4 4 4 4 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 22 22 23 22 22 22 | Ala GCT 11 11 11 11 11 11 | Asp GAT 11 11 11 11 11 11 | Gly GGT 17 17 16 17 17 17
GTC 2 2 2 2 2 1 | GCC 1 1 1 1 1 1 | GAC 3 3 3 3 3 3 | GGC 3 3 3 3 3 3
GTA 7 6 7 7 7 7 | GCA 5 5 4 5 5 5 | Glu GAA 7 7 7 7 7 7 | GGA 3 3 3 3 3 3
GTG 1 2 1 1 1 1 | GCG 1 1 1 1 1 1 | GAG 1 1 1 1 1 1 | GGG 2 2 3 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 13 13 13 13 13 13 | Ser TCT 11 11 11 10 10 11 | Tyr TAT 15 13 14 15 15 14 | Cys TGT 11 11 11 11 11 11
TTC 0 0 0 0 0 0 | TCC 1 1 1 1 1 1 | TAC 1 3 2 1 1 2 | TGC 0 0 0 0 0 0
Leu TTA 10 12 10 13 13 10 | TCA 5 4 5 4 4 5 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 10 9 10 10 10 10 | TCG 0 0 0 1 1 0 | TAG 0 0 0 0 0 0 | Trp TGG 4 4 4 4 4 4
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 3 3 3 3 3 | Pro CCT 7 7 7 7 7 7 | His CAT 3 3 3 2 2 3 | Arg CGT 4 4 4 4 4 4
CTC 2 2 2 2 2 2 | CCC 0 0 0 0 0 0 | CAC 1 1 1 2 2 1 | CGC 0 0 0 0 0 0
CTA 3 3 3 2 2 3 | CCA 4 4 4 4 4 4 | Gln CAA 12 13 12 13 13 12 | CGA 1 1 1 1 1 1
CTG 0 0 0 0 0 0 | CCG 0 0 0 0 0 0 | CAG 4 3 4 3 3 4 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 7 8 7 7 7 7 | Thr ACT 17 17 18 16 16 18 | Asn AAT 12 12 12 13 13 13 | Ser AGT 8 8 8 8 8 8
ATC 0 0 0 0 0 0 | ACC 1 0 0 0 0 0 | AAC 1 0 1 0 0 0 | AGC 1 1 1 1 1 1
ATA 4 4 4 4 4 4 | ACA 4 5 4 5 5 4 | Lys AAA 7 7 7 7 7 7 | Arg AGA 2 2 2 2 2 2
Met ATG 11 11 11 11 11 11 | ACG 1 1 1 1 1 1 | AAG 4 4 4 4 4 4 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 22 23 22 23 23 22 | Ala GCT 11 11 11 11 11 11 | Asp GAT 11 11 11 12 12 11 | Gly GGT 17 16 17 18 18 17
GTC 2 2 2 2 2 2 | GCC 1 1 1 1 1 1 | GAC 3 3 3 2 2 3 | GGC 3 3 3 2 2 3
GTA 7 7 7 7 7 7 | GCA 5 4 5 5 5 5 | Glu GAA 7 7 7 7 7 7 | GGA 3 3 3 4 4 3
GTG 1 1 1 1 1 1 | GCG 1 1 1 0 0 1 | GAG 1 1 1 1 1 1 | GGG 2 3 2 1 1 2
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 13 13 13 13 13 13 | Ser TCT 11 11 11 10 11 11 | Tyr TAT 14 13 14 15 14 14 | Cys TGT 11 11 11 11 11 11
TTC 0 0 0 0 0 0 | TCC 1 1 1 1 1 1 | TAC 2 3 2 1 2 2 | TGC 0 0 0 0 0 0
Leu TTA 10 10 10 13 10 10 | TCA 5 5 5 4 5 5 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 10 10 10 10 10 10 | TCG 0 0 0 1 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 4 4 4 4 4 4
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 3 3 3 3 3 | Pro CCT 7 7 7 7 7 7 | His CAT 3 3 3 2 3 3 | Arg CGT 4 4 4 4 4 4
CTC 2 2 2 2 2 2 | CCC 0 0 0 0 0 0 | CAC 1 1 1 2 1 1 | CGC 0 0 0 0 0 0
CTA 3 3 3 2 3 3 | CCA 4 4 4 4 4 4 | Gln CAA 12 12 12 13 12 12 | CGA 1 1 1 1 2 1
CTG 0 0 0 0 0 0 | CCG 0 0 0 0 0 0 | CAG 4 4 4 3 4 4 | CGG 1 1 1 1 0 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 7 7 7 7 7 7 | Thr ACT 18 18 17 16 18 18 | Asn AAT 12 12 12 13 12 12 | Ser AGT 8 8 8 8 8 8
ATC 0 0 0 0 0 0 | ACC 0 0 1 0 0 0 | AAC 1 1 1 0 1 1 | AGC 1 1 1 1 1 1
ATA 4 4 4 4 4 4 | ACA 4 4 4 5 4 4 | Lys AAA 7 7 7 7 7 7 | Arg AGA 2 2 2 2 2 2
Met ATG 11 11 11 11 11 11 | ACG 1 1 1 1 1 1 | AAG 4 4 4 4 4 4 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 22 21 22 23 22 22 | Ala GCT 11 11 11 11 11 11 | Asp GAT 11 11 11 12 11 11 | Gly GGT 17 17 17 18 17 17
GTC 2 3 2 2 2 1 | GCC 1 1 1 1 1 1 | GAC 3 3 3 2 3 3 | GGC 3 3 3 2 3 3
GTA 7 7 7 7 7 8 | GCA 5 5 5 5 5 5 | Glu GAA 7 7 7 7 7 7 | GGA 3 4 3 4 3 3
GTG 1 1 1 1 1 1 | GCG 1 1 1 0 1 1 | GAG 1 1 1 1 1 1 | GGG 2 1 2 1 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C14
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56436 C:0.05941 A:0.24422 G:0.13201
Average T:0.38174 C:0.14521 A:0.25963 G:0.21342
#2: C19
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56766 C:0.05611 A:0.24422 G:0.13201
Average T:0.38284 C:0.14411 A:0.25963 G:0.21342
#3: C11
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56436 C:0.05941 A:0.24422 G:0.13201
Average T:0.38174 C:0.14521 A:0.25963 G:0.21342
#4: C24
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56436 C:0.05941 A:0.24422 G:0.13201
Average T:0.38174 C:0.14521 A:0.25963 G:0.21342
#5: C9
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.57096 C:0.05281 A:0.24422 G:0.13201
Average T:0.38394 C:0.14301 A:0.25963 G:0.21342
#6: C15
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56436 C:0.05941 A:0.24422 G:0.13201
Average T:0.38174 C:0.14521 A:0.25963 G:0.21342
#7: C30
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.32343 C:0.22112 A:0.26733 G:0.18812
position 3: T:0.56436 C:0.05611 A:0.25083 G:0.12871
Average T:0.38504 C:0.14191 A:0.26073 G:0.21232
#8: C5
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56436 C:0.05941 A:0.24422 G:0.13201
Average T:0.38174 C:0.14521 A:0.25963 G:0.21342
#9: C2
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.57096 C:0.05281 A:0.24422 G:0.13201
Average T:0.38394 C:0.14301 A:0.25963 G:0.21342
#10: C33
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56766 C:0.05611 A:0.24752 G:0.12871
Average T:0.38284 C:0.14411 A:0.26073 G:0.21232
#11: C38
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.32343 C:0.22112 A:0.26733 G:0.18812
position 3: T:0.56436 C:0.05611 A:0.25083 G:0.12871
Average T:0.38504 C:0.14191 A:0.26073 G:0.21232
#12: C22
position 1: T:0.27393 C:0.14521 A:0.26073 G:0.32013
position 2: T:0.32673 C:0.21452 A:0.27063 G:0.18812
position 3: T:0.57426 C:0.04290 A:0.25743 G:0.12541
Average T:0.39164 C:0.13421 A:0.26293 G:0.21122
#13: C18
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56766 C:0.05611 A:0.24422 G:0.13201
Average T:0.38284 C:0.14411 A:0.25963 G:0.21342
#14: C16
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56436 C:0.05941 A:0.24092 G:0.13531
Average T:0.38174 C:0.14521 A:0.25853 G:0.21452
#15: C12
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.32343 C:0.22112 A:0.26733 G:0.18812
position 3: T:0.56436 C:0.05611 A:0.25083 G:0.12871
Average T:0.38504 C:0.14191 A:0.26073 G:0.21232
#16: C7
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56436 C:0.05941 A:0.24422 G:0.13201
Average T:0.38174 C:0.14521 A:0.25963 G:0.21342
#17: C8
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56436 C:0.05941 A:0.24422 G:0.13201
Average T:0.38174 C:0.14521 A:0.25963 G:0.21342
#18: C35
position 1: T:0.26733 C:0.14851 A:0.26733 G:0.31683
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56766 C:0.05611 A:0.24422 G:0.13201
Average T:0.38284 C:0.14411 A:0.26073 G:0.21232
#19: C10
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56766 C:0.05611 A:0.24422 G:0.13201
Average T:0.38284 C:0.14411 A:0.25963 G:0.21342
#20: C37
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.32343 C:0.22112 A:0.26733 G:0.18812
position 3: T:0.56436 C:0.05611 A:0.25083 G:0.12871
Average T:0.38504 C:0.14191 A:0.26073 G:0.21232
#21: C23
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56766 C:0.05611 A:0.24422 G:0.13201
Average T:0.38284 C:0.14411 A:0.25963 G:0.21342
#22: C21
position 1: T:0.27393 C:0.14521 A:0.26073 G:0.32013
position 2: T:0.32343 C:0.21782 A:0.27063 G:0.18812
position 3: T:0.57096 C:0.04620 A:0.25743 G:0.12541
Average T:0.38944 C:0.13641 A:0.26293 G:0.21122
#23: C26
position 1: T:0.27393 C:0.14521 A:0.26073 G:0.32013
position 2: T:0.32343 C:0.21782 A:0.27063 G:0.18812
position 3: T:0.57096 C:0.04620 A:0.25743 G:0.12541
Average T:0.38944 C:0.13641 A:0.26293 G:0.21122
#24: C1
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.57096 C:0.05281 A:0.24422 G:0.13201
Average T:0.38394 C:0.14301 A:0.25963 G:0.21342
#25: C28
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56766 C:0.05611 A:0.24422 G:0.13201
Average T:0.38284 C:0.14411 A:0.25963 G:0.21342
#26: C31
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56106 C:0.06271 A:0.24752 G:0.12871
Average T:0.38064 C:0.14631 A:0.26073 G:0.21232
#27: C6
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56436 C:0.05941 A:0.24422 G:0.13201
Average T:0.38174 C:0.14521 A:0.25963 G:0.21342
#28: C25
position 1: T:0.27393 C:0.14521 A:0.26073 G:0.32013
position 2: T:0.32343 C:0.21782 A:0.27063 G:0.18812
position 3: T:0.57096 C:0.04620 A:0.25743 G:0.12541
Average T:0.38944 C:0.13641 A:0.26293 G:0.21122
#29: C34
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56766 C:0.05611 A:0.24752 G:0.12871
Average T:0.38284 C:0.14411 A:0.26073 G:0.21232
#30: C4
position 1: T:0.26733 C:0.14851 A:0.26403 G:0.32013
position 2: T:0.31353 C:0.22772 A:0.27063 G:0.18812
position 3: T:0.56766 C:0.05281 A:0.24752 G:0.13201
Average T:0.38284 C:0.14301 A:0.26073 G:0.21342
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 390 | Ser S TCT 325 | Tyr Y TAT 421 | Cys C TGT 330
TTC 0 | TCC 31 | TAC 59 | TGC 0
Leu L TTA 320 | TCA 142 | *** * TAA 0 | *** * TGA 0
TTG 296 | TCG 4 | TAG 0 | Trp W TGG 120
------------------------------------------------------------------------------
Leu L CTT 90 | Pro P CCT 210 | His H CAT 86 | Arg R CGT 120
CTC 60 | CCC 0 | CAC 34 | CGC 0
CTA 86 | CCA 120 | Gln Q CAA 368 | CGA 32
CTG 0 | CCG 0 | CAG 112 | CGG 28
------------------------------------------------------------------------------
Ile I ATT 215 | Thr T ACT 519 | Asn N AAT 365 | Ser S AGT 240
ATC 1 | ACC 8 | AAC 21 | AGC 30
ATA 120 | ACA 128 | Lys K AAA 210 | Arg R AGA 60
Met M ATG 330 | ACG 30 | AAG 120 | AGG 0
------------------------------------------------------------------------------
Val V GTT 667 | Ala A GCT 330 | Asp D GAT 335 | Gly G GGT 510
GTC 59 | GCC 30 | GAC 85 | GGC 86
GTA 210 | GCA 146 | Glu E GAA 210 | GGA 95
GTG 31 | GCG 26 | GAG 30 | GGG 59
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.26821 C:0.14807 A:0.26370 G:0.32002
position 2: T:0.31628 C:0.22541 A:0.27019 G:0.18812
position 3: T:0.56689 C:0.05545 A:0.24719 G:0.13047
Average T:0.38379 C:0.14298 A:0.26036 G:0.21287
Model 1: NearlyNeutral (2 categories)
TREE # 1: (24, 9, ((15, 7, 20, 11), (22, 12, 28, 23)), (((19, 8), 3, 1, 6, 27, 16, 17), 14, 13, 2, 21, (4, 26), 25, (10, 29), 18, 30, 5)); MP score: 33
lnL(ntime: 38 np: 41): -1368.181027 +0.000000
31..24 31..9 31..32 32..33 33..15 33..7 33..20 33..11 32..34 34..22 34..12 34..28 34..23 31..35 35..36 36..37 37..19 37..8 36..3 36..1 36..6 36..27 36..16 36..17 35..14 35..13 35..2 35..21 35..38 38..4 38..26 35..25 35..39 39..10 39..29 35..18 35..30 35..5
0.000004 0.000004 0.022001 0.010432 0.000004 0.000004 0.000004 0.000004 0.043706 0.000004 0.007309 0.000004 0.000004 0.003489 0.003501 0.003540 0.000004 0.003539 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.006954 0.000004 0.000004 0.000004 0.003463 0.000004 0.006897 0.000004 0.003478 0.000004 0.000004 0.003481 0.003520 0.003490 7.739535 0.933252 0.000001
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.128892
(24: 0.000004, 9: 0.000004, ((15: 0.000004, 7: 0.000004, 20: 0.000004, 11: 0.000004): 0.010432, (22: 0.000004, 12: 0.007309, 28: 0.000004, 23: 0.000004): 0.043706): 0.022001, (((19: 0.000004, 8: 0.003539): 0.003540, 3: 0.000004, 1: 0.000004, 6: 0.000004, 27: 0.000004, 16: 0.000004, 17: 0.000004): 0.003501, 14: 0.006954, 13: 0.000004, 2: 0.000004, 21: 0.000004, (4: 0.000004, 26: 0.006897): 0.003463, 25: 0.000004, (10: 0.000004, 29: 0.000004): 0.003478, 18: 0.003481, 30: 0.003520, 5: 0.003490): 0.003489);
(C1: 0.000004, C2: 0.000004, ((C12: 0.000004, C30: 0.000004, C37: 0.000004, C38: 0.000004): 0.010432, (C21: 0.000004, C22: 0.007309, C25: 0.000004, C26: 0.000004): 0.043706): 0.022001, (((C10: 0.000004, C5: 0.003539): 0.003540, C11: 0.000004, C14: 0.000004, C15: 0.000004, C6: 0.000004, C7: 0.000004, C8: 0.000004): 0.003501, C16: 0.006954, C18: 0.000004, C19: 0.000004, C23: 0.000004, (C24: 0.000004, C31: 0.006897): 0.003463, C28: 0.000004, (C33: 0.000004, C34: 0.000004): 0.003478, C35: 0.003481, C4: 0.003520, C9: 0.003490): 0.003489);
Detailed output identifying parameters
kappa (ts/tv) = 7.73954
MLEs of dN/dS (w) for site classes (K=2)
p: 0.93325 0.06675
w: 0.00000 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..24 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
31..9 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
31..32 0.022 781.7 127.3 0.0667 0.0025 0.0371 1.9 4.7
32..33 0.010 781.7 127.3 0.0667 0.0012 0.0176 0.9 2.2
33..15 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
33..7 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
33..20 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
33..11 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
32..34 0.044 781.7 127.3 0.0667 0.0049 0.0738 3.9 9.4
34..22 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
34..12 0.007 781.7 127.3 0.0667 0.0008 0.0123 0.6 1.6
34..28 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
34..23 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
31..35 0.003 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.7
35..36 0.004 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.8
36..37 0.004 781.7 127.3 0.0667 0.0004 0.0060 0.3 0.8
37..19 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
37..8 0.004 781.7 127.3 0.0667 0.0004 0.0060 0.3 0.8
36..3 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..1 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..6 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..27 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..16 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..17 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..14 0.007 781.7 127.3 0.0667 0.0008 0.0117 0.6 1.5
35..13 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..2 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..21 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..38 0.003 781.7 127.3 0.0667 0.0004 0.0058 0.3 0.7
38..4 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
38..26 0.007 781.7 127.3 0.0667 0.0008 0.0116 0.6 1.5
35..25 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..39 0.003 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.7
39..10 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
39..29 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..18 0.003 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.7
35..30 0.004 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.8
35..5 0.003 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.7
Time used: 2:05
Model 2: PositiveSelection (3 categories)
TREE # 1: (24, 9, ((15, 7, 20, 11), (22, 12, 28, 23)), (((19, 8), 3, 1, 6, 27, 16, 17), 14, 13, 2, 21, (4, 26), 25, (10, 29), 18, 30, 5)); MP score: 33
check convergence..
lnL(ntime: 38 np: 43): -1368.181027 +0.000000
31..24 31..9 31..32 32..33 33..15 33..7 33..20 33..11 32..34 34..22 34..12 34..28 34..23 31..35 35..36 36..37 37..19 37..8 36..3 36..1 36..6 36..27 36..16 36..17 35..14 35..13 35..2 35..21 35..38 38..4 38..26 35..25 35..39 39..10 39..29 35..18 35..30 35..5
0.000004 0.000004 0.022001 0.010433 0.000004 0.000004 0.000004 0.000004 0.043706 0.000004 0.007309 0.000004 0.000004 0.003489 0.003501 0.003540 0.000004 0.003539 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.006954 0.000004 0.000004 0.000004 0.003463 0.000004 0.006897 0.000004 0.003478 0.000004 0.000004 0.003481 0.003520 0.003490 7.739654 0.933252 0.043515 0.000001 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.128892
(24: 0.000004, 9: 0.000004, ((15: 0.000004, 7: 0.000004, 20: 0.000004, 11: 0.000004): 0.010433, (22: 0.000004, 12: 0.007309, 28: 0.000004, 23: 0.000004): 0.043706): 0.022001, (((19: 0.000004, 8: 0.003539): 0.003540, 3: 0.000004, 1: 0.000004, 6: 0.000004, 27: 0.000004, 16: 0.000004, 17: 0.000004): 0.003501, 14: 0.006954, 13: 0.000004, 2: 0.000004, 21: 0.000004, (4: 0.000004, 26: 0.006897): 0.003463, 25: 0.000004, (10: 0.000004, 29: 0.000004): 0.003478, 18: 0.003481, 30: 0.003520, 5: 0.003490): 0.003489);
(C1: 0.000004, C2: 0.000004, ((C12: 0.000004, C30: 0.000004, C37: 0.000004, C38: 0.000004): 0.010433, (C21: 0.000004, C22: 0.007309, C25: 0.000004, C26: 0.000004): 0.043706): 0.022001, (((C10: 0.000004, C5: 0.003539): 0.003540, C11: 0.000004, C14: 0.000004, C15: 0.000004, C6: 0.000004, C7: 0.000004, C8: 0.000004): 0.003501, C16: 0.006954, C18: 0.000004, C19: 0.000004, C23: 0.000004, (C24: 0.000004, C31: 0.006897): 0.003463, C28: 0.000004, (C33: 0.000004, C34: 0.000004): 0.003478, C35: 0.003481, C4: 0.003520, C9: 0.003490): 0.003489);
Detailed output identifying parameters
kappa (ts/tv) = 7.73965
MLEs of dN/dS (w) for site classes (K=3)
p: 0.93325 0.04351 0.02323
w: 0.00000 1.00000 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..24 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
31..9 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
31..32 0.022 781.7 127.3 0.0667 0.0025 0.0371 1.9 4.7
32..33 0.010 781.7 127.3 0.0667 0.0012 0.0176 0.9 2.2
33..15 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
33..7 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
33..20 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
33..11 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
32..34 0.044 781.7 127.3 0.0667 0.0049 0.0738 3.9 9.4
34..22 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
34..12 0.007 781.7 127.3 0.0667 0.0008 0.0123 0.6 1.6
34..28 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
34..23 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
31..35 0.003 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.7
35..36 0.004 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.8
36..37 0.004 781.7 127.3 0.0667 0.0004 0.0060 0.3 0.8
37..19 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
37..8 0.004 781.7 127.3 0.0667 0.0004 0.0060 0.3 0.8
36..3 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..1 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..6 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..27 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..16 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..17 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..14 0.007 781.7 127.3 0.0667 0.0008 0.0117 0.6 1.5
35..13 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..2 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..21 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..38 0.003 781.7 127.3 0.0667 0.0004 0.0058 0.3 0.7
38..4 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
38..26 0.007 781.7 127.3 0.0667 0.0008 0.0116 0.6 1.5
35..25 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..39 0.003 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.7
39..10 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
39..29 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..18 0.003 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.7
35..30 0.004 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.8
35..5 0.003 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.7
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C14)
Pr(w>1) post mean +- SE for w
105 N 0.619 1.796 +- 1.298
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.592 0.216 0.091 0.044 0.023 0.013 0.008 0.005 0.004 0.003
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.002 0.997
sum of density on p0-p1 = 1.000000
Time used: 5:47
Model 7: beta (10 categories)
TREE # 1: (24, 9, ((15, 7, 20, 11), (22, 12, 28, 23)), (((19, 8), 3, 1, 6, 27, 16, 17), 14, 13, 2, 21, (4, 26), 25, (10, 29), 18, 30, 5)); MP score: 33
lnL(ntime: 38 np: 41): -1368.279628 +0.000000
31..24 31..9 31..32 32..33 33..15 33..7 33..20 33..11 32..34 34..22 34..12 34..28 34..23 31..35 35..36 36..37 37..19 37..8 36..3 36..1 36..6 36..27 36..16 36..17 35..14 35..13 35..2 35..21 35..38 38..4 38..26 35..25 35..39 39..10 39..29 35..18 35..30 35..5
0.000004 0.000004 0.022256 0.010153 0.000004 0.000004 0.000004 0.000004 0.042944 0.000004 0.007292 0.000004 0.000004 0.003504 0.003503 0.003528 0.000004 0.003528 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.006979 0.000004 0.000004 0.000004 0.003478 0.000004 0.006922 0.000004 0.003492 0.000004 0.000004 0.003496 0.003536 0.003505 7.719860 0.010794 0.182683
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.128206
(24: 0.000004, 9: 0.000004, ((15: 0.000004, 7: 0.000004, 20: 0.000004, 11: 0.000004): 0.010153, (22: 0.000004, 12: 0.007292, 28: 0.000004, 23: 0.000004): 0.042944): 0.022256, (((19: 0.000004, 8: 0.003528): 0.003528, 3: 0.000004, 1: 0.000004, 6: 0.000004, 27: 0.000004, 16: 0.000004, 17: 0.000004): 0.003503, 14: 0.006979, 13: 0.000004, 2: 0.000004, 21: 0.000004, (4: 0.000004, 26: 0.006922): 0.003478, 25: 0.000004, (10: 0.000004, 29: 0.000004): 0.003492, 18: 0.003496, 30: 0.003536, 5: 0.003505): 0.003504);
(C1: 0.000004, C2: 0.000004, ((C12: 0.000004, C30: 0.000004, C37: 0.000004, C38: 0.000004): 0.010153, (C21: 0.000004, C22: 0.007292, C25: 0.000004, C26: 0.000004): 0.042944): 0.022256, (((C10: 0.000004, C5: 0.003528): 0.003528, C11: 0.000004, C14: 0.000004, C15: 0.000004, C6: 0.000004, C7: 0.000004, C8: 0.000004): 0.003503, C16: 0.006979, C18: 0.000004, C19: 0.000004, C23: 0.000004, (C24: 0.000004, C31: 0.006922): 0.003478, C28: 0.000004, (C33: 0.000004, C34: 0.000004): 0.003492, C35: 0.003496, C4: 0.003536, C9: 0.003505): 0.003504);
Detailed output identifying parameters
kappa (ts/tv) = 7.71986
Parameters in M7 (beta):
p = 0.01079 q = 0.18268
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00005 0.63014
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..24 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
31..9 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
31..32 0.022 781.7 127.3 0.0630 0.0024 0.0382 1.9 4.9
32..33 0.010 781.7 127.3 0.0630 0.0011 0.0174 0.9 2.2
33..15 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
33..7 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
33..20 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
33..11 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
32..34 0.043 781.7 127.3 0.0630 0.0046 0.0737 3.6 9.4
34..22 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
34..12 0.007 781.7 127.3 0.0630 0.0008 0.0125 0.6 1.6
34..28 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
34..23 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
31..35 0.004 781.7 127.3 0.0630 0.0004 0.0060 0.3 0.8
35..36 0.004 781.7 127.3 0.0630 0.0004 0.0060 0.3 0.8
36..37 0.004 781.7 127.3 0.0630 0.0004 0.0061 0.3 0.8
37..19 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
37..8 0.004 781.7 127.3 0.0630 0.0004 0.0061 0.3 0.8
36..3 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
36..1 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
36..6 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
36..27 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
36..16 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
36..17 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
35..14 0.007 781.7 127.3 0.0630 0.0008 0.0120 0.6 1.5
35..13 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
35..2 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
35..21 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
35..38 0.003 781.7 127.3 0.0630 0.0004 0.0060 0.3 0.8
38..4 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
38..26 0.007 781.7 127.3 0.0630 0.0007 0.0119 0.6 1.5
35..25 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
35..39 0.003 781.7 127.3 0.0630 0.0004 0.0060 0.3 0.8
39..10 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
39..29 0.000 781.7 127.3 0.0630 0.0000 0.0000 0.0 0.0
35..18 0.003 781.7 127.3 0.0630 0.0004 0.0060 0.3 0.8
35..30 0.004 781.7 127.3 0.0630 0.0004 0.0061 0.3 0.8
35..5 0.004 781.7 127.3 0.0630 0.0004 0.0060 0.3 0.8
Time used: 25:40
Model 8: beta&w>1 (11 categories)
TREE # 1: (24, 9, ((15, 7, 20, 11), (22, 12, 28, 23)), (((19, 8), 3, 1, 6, 27, 16, 17), 14, 13, 2, 21, (4, 26), 25, (10, 29), 18, 30, 5)); MP score: 33
lnL(ntime: 38 np: 43): -1368.181028 +0.000000
31..24 31..9 31..32 32..33 33..15 33..7 33..20 33..11 32..34 34..22 34..12 34..28 34..23 31..35 35..36 36..37 37..19 37..8 36..3 36..1 36..6 36..27 36..16 36..17 35..14 35..13 35..2 35..21 35..38 38..4 38..26 35..25 35..39 39..10 39..29 35..18 35..30 35..5
0.000004 0.000004 0.022001 0.010432 0.000004 0.000004 0.000004 0.000004 0.043706 0.000004 0.007309 0.000004 0.000004 0.003490 0.003501 0.003540 0.000004 0.003539 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.006954 0.000004 0.000004 0.000004 0.003463 0.000004 0.006897 0.000004 0.003478 0.000004 0.000004 0.003481 0.003520 0.003490 7.739573 0.933252 0.005000 1.841736 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.128892
(24: 0.000004, 9: 0.000004, ((15: 0.000004, 7: 0.000004, 20: 0.000004, 11: 0.000004): 0.010432, (22: 0.000004, 12: 0.007309, 28: 0.000004, 23: 0.000004): 0.043706): 0.022001, (((19: 0.000004, 8: 0.003539): 0.003540, 3: 0.000004, 1: 0.000004, 6: 0.000004, 27: 0.000004, 16: 0.000004, 17: 0.000004): 0.003501, 14: 0.006954, 13: 0.000004, 2: 0.000004, 21: 0.000004, (4: 0.000004, 26: 0.006897): 0.003463, 25: 0.000004, (10: 0.000004, 29: 0.000004): 0.003478, 18: 0.003481, 30: 0.003520, 5: 0.003490): 0.003490);
(C1: 0.000004, C2: 0.000004, ((C12: 0.000004, C30: 0.000004, C37: 0.000004, C38: 0.000004): 0.010432, (C21: 0.000004, C22: 0.007309, C25: 0.000004, C26: 0.000004): 0.043706): 0.022001, (((C10: 0.000004, C5: 0.003539): 0.003540, C11: 0.000004, C14: 0.000004, C15: 0.000004, C6: 0.000004, C7: 0.000004, C8: 0.000004): 0.003501, C16: 0.006954, C18: 0.000004, C19: 0.000004, C23: 0.000004, (C24: 0.000004, C31: 0.006897): 0.003463, C28: 0.000004, (C33: 0.000004, C34: 0.000004): 0.003478, C35: 0.003481, C4: 0.003520, C9: 0.003490): 0.003490);
Detailed output identifying parameters
kappa (ts/tv) = 7.73957
Parameters in M8 (beta&w>1):
p0 = 0.93325 p = 0.00500 q = 1.84174
(p1 = 0.06675) w = 1.00000
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09333 0.09333 0.09333 0.09333 0.09333 0.09333 0.09333 0.09333 0.09333 0.09333 0.06675
w: 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00001 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..24 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
31..9 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
31..32 0.022 781.7 127.3 0.0667 0.0025 0.0371 1.9 4.7
32..33 0.010 781.7 127.3 0.0667 0.0012 0.0176 0.9 2.2
33..15 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
33..7 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
33..20 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
33..11 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
32..34 0.044 781.7 127.3 0.0667 0.0049 0.0738 3.9 9.4
34..22 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
34..12 0.007 781.7 127.3 0.0667 0.0008 0.0123 0.6 1.6
34..28 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
34..23 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
31..35 0.003 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.7
35..36 0.004 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.8
36..37 0.004 781.7 127.3 0.0667 0.0004 0.0060 0.3 0.8
37..19 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
37..8 0.004 781.7 127.3 0.0667 0.0004 0.0060 0.3 0.8
36..3 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..1 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..6 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..27 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..16 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
36..17 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..14 0.007 781.7 127.3 0.0667 0.0008 0.0117 0.6 1.5
35..13 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..2 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..21 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..38 0.003 781.7 127.3 0.0667 0.0004 0.0058 0.3 0.7
38..4 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
38..26 0.007 781.7 127.3 0.0667 0.0008 0.0116 0.6 1.5
35..25 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..39 0.003 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.7
39..10 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
39..29 0.000 781.7 127.3 0.0667 0.0000 0.0000 0.0 0.0
35..18 0.003 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.7
35..30 0.004 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.8
35..5 0.003 781.7 127.3 0.0667 0.0004 0.0059 0.3 0.7
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C14)
Pr(w>1) post mean +- SE for w
17 I 0.535 1.119 +- 0.947
105 N 0.723 1.448 +- 0.894
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 0.999 0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.001 0.008 0.031 0.081 0.165 0.283 0.432
ws: 0.801 0.141 0.036 0.012 0.005 0.002 0.001 0.001 0.000 0.000
Time used: 43:07
Model 1: NearlyNeutral -1368.181027 Model 2: PositiveSelection -1368.181027 Model 7: beta -1368.279628 Model 8: beta&w>1 -1368.181028 Model 2 vs 1 0 Model 8 vs 7 .197200
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
