--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2225.78 -2253.49
2 -2229.58 -2253.56
--------------------------------------
TOTAL -2226.45 -2253.53
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.041196 0.000056 0.027599 0.056936 0.040550 1494.98 1497.99 1.000
r(A<->C){all} 0.028858 0.000791 0.000006 0.084137 0.020100 412.99 418.30 1.000
r(A<->G){all} 0.239074 0.004931 0.115442 0.377927 0.233947 526.28 557.61 1.000
r(A<->T){all} 0.022952 0.000193 0.002189 0.050164 0.020124 562.50 686.86 1.000
r(C<->G){all} 0.038428 0.001379 0.000006 0.114897 0.027713 300.07 391.13 1.000
r(C<->T){all} 0.650120 0.006057 0.500457 0.795281 0.652423 541.54 554.59 1.000
r(G<->T){all} 0.020567 0.000231 0.000024 0.050875 0.016857 624.73 652.01 1.000
pi(A){all} 0.253071 0.000120 0.231308 0.273528 0.253068 863.17 977.66 1.000
pi(C){all} 0.115857 0.000067 0.099384 0.131177 0.115685 1164.34 1178.39 1.000
pi(G){all} 0.183726 0.000098 0.164239 0.202783 0.183637 826.93 888.72 1.000
pi(T){all} 0.447346 0.000162 0.422969 0.472522 0.447531 735.77 824.30 1.000
alpha{1,2} 0.124593 0.029417 0.000011 0.344377 0.085677 1014.46 1094.47 1.000
alpha{3} 2.284749 1.699733 0.319334 4.962356 2.006349 941.56 1094.01 1.000
pinvar{all} 0.739602 0.008891 0.551677 0.881567 0.756660 595.88 776.86 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -2092.511847
Model 2: PositiveSelection -2091.990462
Model 7: beta -2093.031572
Model 8: beta&w>1 -2092.002936
Model 2 vs 1 1.042770
Model 8 vs 7 2.057272
-- Starting log on Wed Nov 23 21:54:13 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.18 sec, SCORE=1000, Nseq=38, Len=496
C1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C2 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C3 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C4 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C5 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C6 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C7 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C8 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C9 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C10 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C11 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C12 VVLSNLLYILFFISLTCFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C13 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C14 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C15 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C16 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C17 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C18 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C19 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C20 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C21 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C22 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C23 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C24 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C25 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C26 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C27 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C28 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C29 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C30 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C31 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C32 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C33 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C34 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C35 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C36 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C37 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C38 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
************:** **********************************
C1 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C2 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C3 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C4 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C5 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C6 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C7 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C8 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C9 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C10 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C11 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C12 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C13 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C14 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C15 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C16 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C17 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C18 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C19 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C20 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C21 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C22 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C23 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C24 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C25 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C26 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C27 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C28 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C29 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C30 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C31 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C32 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C33 VRDISVNDLCFANKFFQFNQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C34 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C35 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C36 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C37 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C38 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
******************:*********.*********************
C1 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C2 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C3 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C4 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C5 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C6 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C7 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C8 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C9 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C10 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C11 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C12 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C13 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C14 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C15 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C16 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C17 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C18 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C19 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C20 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C21 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C22 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C23 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C24 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C25 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C26 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C27 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C28 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C29 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C30 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C31 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C32 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C33 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C34 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C35 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C36 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C37 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C38 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
***********:**************************************
C1 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C2 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C3 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C4 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C5 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C6 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C7 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C8 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C9 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C10 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C11 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C12 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C13 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C14 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C15 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C16 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C17 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C18 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C19 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C20 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C21 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C22 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C23 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C24 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C25 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C26 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C27 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C28 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C29 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLADSNGFIRF
C30 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C31 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C32 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C33 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C34 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C35 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C36 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C37 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C38 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
*******************:**********************:*******
C1 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C2 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C3 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C4 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C5 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C6 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSV
C7 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C8 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C9 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C10 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C11 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C12 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C13 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C14 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C15 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C16 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C17 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C18 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C19 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C20 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C21 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C22 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C23 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C24 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C25 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C26 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C27 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C28 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C29 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C30 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C31 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C32 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C33 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C34 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C35 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C36 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C37 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C38 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
*************************************************:
C1 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C2 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C3 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C4 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C5 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C6 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C7 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C8 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C9 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C10 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C11 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C12 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C13 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C14 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C15 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C16 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C17 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C18 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C19 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C20 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C21 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C22 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C23 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C24 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C25 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C26 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C27 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C28 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C29 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C30 PGTFCGRDLFDLFYQFLSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C31 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C32 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C33 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C34 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C35 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C36 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C37 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C38 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
********:*******:*********************************
C1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C2 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C3 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C4 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C5 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C6 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C7 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C8 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C9 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C10 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C11 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C12 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C13 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C14 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C15 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C16 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C17 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C18 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C19 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C20 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C21 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C22 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C23 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C24 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C25 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C26 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C27 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C28 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C29 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C30 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C31 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C32 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C33 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C34 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C35 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C36 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C37 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C38 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
******************:*******************************
C1 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C2 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C3 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C4 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C5 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C6 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C7 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C8 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C9 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C10 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C11 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C12 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C13 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C14 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C15 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C16 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C17 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C18 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C19 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C20 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C21 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C22 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C23 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C24 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C25 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C26 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C27 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C28 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C29 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C30 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C31 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C32 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C33 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C34 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C35 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C36 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C37 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C38 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
**************************************************
C1 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C2 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C3 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C4 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C5 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C6 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C7 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C8 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C9 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C10 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C11 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C12 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C13 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C14 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C15 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C16 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C17 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C18 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C19 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C20 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C21 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C22 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C23 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C24 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C25 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C26 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C27 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C28 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C29 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C30 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C31 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C32 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C33 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C34 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C35 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C36 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C37 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C38 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
****.*********************************************
C1 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C2 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C3 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C4 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C5 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C6 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C7 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C8 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C9 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C10 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C11 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C12 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C13 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C14 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C15 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C16 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C17 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C18 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C19 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C20 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C21 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C22 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C23 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C24 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C25 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C26 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C27 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C28 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C29 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C30 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C31 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C32 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C33 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C34 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C35 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C36 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C37 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C38 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
**********************************************
-- Starting log on Wed Nov 23 21:57:00 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=1.18 sec, SCORE=1000, Nseq=38, Len=496
C1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C2 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C3 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C4 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C5 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C6 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C7 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C8 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C9 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C10 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C11 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C12 VVLSNLLYILFFISLTCFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C13 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C14 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C15 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C16 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C17 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C18 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C19 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C20 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C21 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C22 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C23 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C24 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C25 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C26 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C27 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C28 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C29 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C30 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C31 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C32 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C33 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C34 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C35 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C36 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C37 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C38 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
************:** **********************************
C1 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C2 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C3 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C4 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C5 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C6 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C7 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C8 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C9 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C10 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C11 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C12 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C13 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C14 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C15 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C16 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C17 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C18 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C19 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C20 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C21 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C22 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C23 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C24 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C25 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C26 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C27 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C28 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C29 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C30 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C31 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C32 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C33 VRDISVNDLCFANKFFQFNQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C34 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C35 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C36 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C37 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C38 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
******************:*********.*********************
C1 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C2 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C3 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C4 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C5 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C6 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C7 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C8 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C9 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C10 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C11 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C12 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C13 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C14 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C15 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C16 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C17 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C18 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C19 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C20 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C21 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C22 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C23 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C24 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C25 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C26 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C27 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C28 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C29 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C30 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C31 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C32 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C33 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C34 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C35 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C36 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C37 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C38 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
***********:**************************************
C1 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C2 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C3 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C4 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C5 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C6 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C7 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C8 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C9 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C10 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C11 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C12 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C13 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C14 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C15 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C16 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C17 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C18 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C19 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C20 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C21 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C22 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C23 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C24 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C25 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C26 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C27 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C28 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C29 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLADSNGFIRF
C30 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C31 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C32 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C33 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C34 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C35 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C36 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C37 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C38 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
*******************:**********************:*******
C1 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C2 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C3 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C4 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C5 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C6 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSV
C7 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C8 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C9 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C10 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C11 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C12 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C13 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C14 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C15 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C16 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C17 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C18 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C19 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C20 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C21 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C22 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C23 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C24 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C25 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C26 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C27 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C28 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C29 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C30 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C31 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C32 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C33 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C34 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C35 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C36 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C37 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C38 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
*************************************************:
C1 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C2 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C3 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C4 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C5 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C6 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C7 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C8 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C9 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C10 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C11 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C12 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C13 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C14 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C15 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C16 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C17 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C18 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C19 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C20 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C21 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C22 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C23 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C24 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C25 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C26 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C27 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C28 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C29 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C30 PGTFCGRDLFDLFYQFLSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C31 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C32 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C33 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C34 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C35 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C36 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C37 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C38 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
********:*******:*********************************
C1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C2 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C3 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C4 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C5 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C6 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C7 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C8 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C9 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C10 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C11 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C12 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C13 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C14 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C15 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C16 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C17 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C18 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C19 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C20 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C21 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C22 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C23 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C24 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C25 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C26 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C27 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C28 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C29 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C30 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C31 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C32 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C33 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C34 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C35 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C36 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C37 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C38 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
******************:*******************************
C1 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C2 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C3 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C4 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C5 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C6 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C7 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C8 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C9 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C10 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C11 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C12 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C13 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C14 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C15 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C16 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C17 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C18 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C19 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C20 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C21 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C22 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C23 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C24 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C25 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C26 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C27 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C28 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C29 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C30 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C31 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C32 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C33 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C34 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C35 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C36 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C37 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C38 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
**************************************************
C1 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C2 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C3 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C4 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C5 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C6 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C7 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C8 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C9 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C10 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C11 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C12 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C13 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C14 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C15 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C16 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C17 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C18 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C19 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C20 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C21 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C22 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C23 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C24 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C25 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C26 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C27 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C28 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C29 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C30 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C31 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C32 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C33 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C34 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C35 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C36 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C37 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C38 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
****.*********************************************
C1 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C2 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C3 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C4 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C5 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C6 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C7 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C8 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C9 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C10 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C11 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C12 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C13 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C14 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C15 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C16 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C17 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C18 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C19 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C20 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C21 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C22 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C23 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C24 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C25 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C26 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C27 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C28 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C29 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C30 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C31 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C32 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C33 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C34 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C35 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C36 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C37 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C38 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
**********************************************
-- Starting log on Wed Nov 23 23:29:54 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result/gapped_alignment/codeml,BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 30 taxa and 1488 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C11
Taxon 4 -> C12
Taxon 5 -> C14
Taxon 6 -> C15
Taxon 7 -> C16
Taxon 8 -> C18
Taxon 9 -> C19
Taxon 10 -> C2
Taxon 11 -> C21
Taxon 12 -> C22
Taxon 13 -> C23
Taxon 14 -> C24
Taxon 15 -> C25
Taxon 16 -> C26
Taxon 17 -> C28
Taxon 18 -> C30
Taxon 19 -> C31
Taxon 20 -> C33
Taxon 21 -> C34
Taxon 22 -> C35
Taxon 23 -> C37
Taxon 24 -> C38
Taxon 25 -> C4
Taxon 26 -> C5
Taxon 27 -> C6
Taxon 28 -> C7
Taxon 29 -> C8
Taxon 30 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1669246196
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 2139416488
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 1470486239
Seed = 1525519933
Swapseed = 1669246196
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 14 unique site patterns
Division 2 has 6 unique site patterns
Division 3 has 22 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -3991.093913 -- 82.122948
Chain 2 -- -4064.888322 -- 82.122948
Chain 3 -- -4001.852196 -- 82.122948
Chain 4 -- -4037.940067 -- 82.122948
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -4067.833411 -- 82.122948
Chain 2 -- -4077.832066 -- 82.122948
Chain 3 -- -3994.143546 -- 82.122948
Chain 4 -- -4069.554954 -- 82.122948
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-3991.094] (-4064.888) (-4001.852) (-4037.940) * [-4067.833] (-4077.832) (-3994.144) (-4069.555)
1000 -- (-2486.988) [-2379.334] (-2376.260) (-2519.043) * (-2457.473) (-2370.386) [-2322.069] (-2407.390) -- 0:16:39
2000 -- (-2351.138) (-2316.528) (-2286.770) [-2294.386] * (-2289.667) (-2295.754) [-2278.426] (-2301.421) -- 0:08:19
3000 -- (-2280.075) (-2288.239) (-2272.604) [-2261.200] * (-2277.970) (-2279.685) (-2264.147) [-2261.071] -- 0:11:04
4000 -- [-2255.060] (-2272.573) (-2253.572) (-2251.143) * (-2252.667) (-2258.105) (-2253.774) [-2250.886] -- 0:08:18
5000 -- [-2264.948] (-2287.107) (-2248.536) (-2248.275) * (-2238.528) [-2244.865] (-2252.171) (-2263.944) -- 0:09:57
Average standard deviation of split frequencies: 0.084049
6000 -- [-2256.292] (-2271.222) (-2251.974) (-2252.214) * (-2247.544) (-2234.721) [-2250.085] (-2243.060) -- 0:11:02
7000 -- (-2262.082) [-2255.562] (-2249.595) (-2251.600) * (-2243.098) (-2238.446) [-2250.303] (-2252.265) -- 0:11:49
8000 -- (-2255.063) (-2259.795) (-2248.939) [-2255.195] * [-2234.185] (-2249.288) (-2246.269) (-2244.257) -- 0:10:20
9000 -- (-2249.863) (-2250.174) [-2246.634] (-2250.010) * (-2238.538) (-2236.181) [-2247.710] (-2257.789) -- 0:11:00
10000 -- (-2243.394) (-2260.071) (-2254.183) [-2240.923] * (-2238.018) (-2254.912) [-2237.966] (-2233.338) -- 0:11:33
Average standard deviation of split frequencies: 0.086222
11000 -- (-2255.041) (-2264.951) (-2247.860) [-2241.566] * [-2235.441] (-2239.965) (-2238.067) (-2240.263) -- 0:11:59
12000 -- [-2252.404] (-2255.687) (-2247.758) (-2244.806) * [-2238.692] (-2248.274) (-2249.424) (-2240.394) -- 0:10:58
13000 -- [-2238.959] (-2275.930) (-2254.600) (-2255.857) * [-2231.466] (-2253.051) (-2248.314) (-2242.113) -- 0:11:23
14000 -- [-2245.739] (-2261.730) (-2243.497) (-2236.514) * [-2233.279] (-2249.168) (-2250.520) (-2239.432) -- 0:11:44
15000 -- (-2248.168) (-2247.723) (-2245.376) [-2236.767] * [-2242.530] (-2257.914) (-2241.995) (-2256.372) -- 0:12:02
Average standard deviation of split frequencies: 0.076276
16000 -- [-2240.401] (-2248.872) (-2241.901) (-2237.866) * (-2257.477) (-2247.435) (-2248.785) [-2240.626] -- 0:12:18
17000 -- [-2239.895] (-2232.371) (-2247.383) (-2237.397) * [-2234.076] (-2243.608) (-2249.555) (-2235.972) -- 0:12:31
18000 -- (-2255.018) (-2236.745) (-2259.598) [-2238.759] * (-2234.443) (-2253.533) (-2245.501) [-2236.461] -- 0:11:49
19000 -- (-2250.782) (-2261.012) (-2263.469) [-2235.776] * (-2232.387) (-2248.719) [-2236.211] (-2248.490) -- 0:12:02
20000 -- (-2243.644) (-2237.744) (-2277.880) [-2236.309] * (-2239.249) (-2250.873) [-2245.441] (-2244.866) -- 0:12:15
Average standard deviation of split frequencies: 0.065764
21000 -- [-2245.640] (-2241.277) (-2260.830) (-2242.996) * [-2234.275] (-2243.931) (-2248.189) (-2245.623) -- 0:12:25
22000 -- (-2239.730) [-2235.423] (-2249.678) (-2246.330) * [-2241.029] (-2245.832) (-2244.674) (-2257.988) -- 0:12:35
23000 -- [-2246.776] (-2256.220) (-2248.407) (-2233.496) * [-2243.523] (-2249.093) (-2255.620) (-2234.369) -- 0:12:44
24000 -- (-2235.180) (-2246.193) (-2246.850) [-2230.878] * (-2244.139) [-2250.391] (-2256.714) (-2249.442) -- 0:12:12
25000 -- [-2251.092] (-2239.827) (-2239.806) (-2236.295) * (-2251.672) [-2242.744] (-2244.683) (-2235.982) -- 0:12:21
Average standard deviation of split frequencies: 0.047433
26000 -- (-2257.781) (-2243.081) (-2243.595) [-2235.236] * [-2235.050] (-2242.134) (-2236.089) (-2252.535) -- 0:12:29
27000 -- (-2248.551) (-2252.620) (-2252.868) [-2236.032] * (-2235.834) [-2244.720] (-2256.492) (-2253.954) -- 0:12:36
28000 -- (-2247.932) [-2241.130] (-2252.263) (-2235.903) * [-2232.450] (-2256.691) (-2244.211) (-2243.622) -- 0:12:43
29000 -- (-2254.460) [-2233.037] (-2239.541) (-2245.507) * [-2241.410] (-2246.305) (-2243.774) (-2245.100) -- 0:12:50
30000 -- (-2265.473) (-2244.774) (-2247.885) [-2240.737] * [-2234.288] (-2269.165) (-2240.805) (-2240.853) -- 0:12:56
Average standard deviation of split frequencies: 0.046116
31000 -- (-2261.911) [-2246.671] (-2242.913) (-2245.444) * (-2249.746) [-2244.991] (-2231.798) (-2239.883) -- 0:12:30
32000 -- (-2256.784) [-2243.017] (-2241.811) (-2246.500) * (-2237.648) (-2252.576) (-2262.442) [-2229.806] -- 0:12:36
33000 -- (-2252.535) (-2244.831) (-2242.244) [-2243.811] * (-2242.594) (-2233.167) [-2251.229] (-2248.765) -- 0:12:41
34000 -- [-2240.881] (-2244.292) (-2246.947) (-2258.930) * (-2248.902) (-2246.211) [-2261.551] (-2264.031) -- 0:12:47
35000 -- (-2241.927) [-2239.133] (-2243.586) (-2253.054) * [-2247.679] (-2256.607) (-2249.157) (-2252.463) -- 0:12:52
Average standard deviation of split frequencies: 0.040623
36000 -- (-2256.712) (-2244.851) [-2229.881] (-2242.650) * (-2242.100) (-2244.941) [-2246.848] (-2254.691) -- 0:12:29
37000 -- (-2256.313) [-2246.862] (-2244.693) (-2247.638) * (-2268.362) (-2243.600) [-2242.070] (-2245.387) -- 0:12:34
38000 -- (-2250.395) (-2253.107) [-2244.667] (-2255.156) * (-2246.419) (-2262.029) (-2244.649) [-2240.556] -- 0:12:39
39000 -- (-2249.072) (-2239.038) [-2243.835] (-2245.259) * (-2260.065) (-2247.290) (-2259.286) [-2239.448] -- 0:12:43
40000 -- (-2258.189) [-2240.741] (-2246.153) (-2239.943) * [-2245.701] (-2246.210) (-2262.331) (-2237.923) -- 0:12:48
Average standard deviation of split frequencies: 0.039498
41000 -- (-2267.722) [-2235.076] (-2251.886) (-2236.471) * [-2246.511] (-2244.552) (-2239.584) (-2239.079) -- 0:12:51
42000 -- (-2258.724) (-2235.783) (-2265.923) [-2229.959] * (-2258.154) (-2239.323) (-2270.144) [-2232.948] -- 0:12:55
43000 -- [-2237.963] (-2237.628) (-2258.318) (-2238.532) * (-2257.868) (-2248.572) (-2251.378) [-2227.292] -- 0:12:36
44000 -- (-2237.959) [-2239.799] (-2245.690) (-2250.306) * [-2238.845] (-2253.211) (-2247.649) (-2258.209) -- 0:12:40
45000 -- [-2242.677] (-2246.414) (-2259.655) (-2242.045) * (-2249.286) (-2239.814) (-2269.133) [-2248.356] -- 0:12:44
Average standard deviation of split frequencies: 0.037234
46000 -- [-2233.532] (-2241.630) (-2261.405) (-2247.091) * (-2250.555) [-2238.281] (-2242.882) (-2235.910) -- 0:12:47
47000 -- [-2233.742] (-2254.706) (-2271.539) (-2247.944) * [-2238.090] (-2235.488) (-2245.130) (-2236.574) -- 0:12:50
48000 -- (-2239.483) (-2253.975) (-2257.460) [-2244.068] * [-2239.177] (-2243.767) (-2252.215) (-2254.733) -- 0:12:33
49000 -- (-2237.808) (-2248.701) (-2239.187) [-2242.384] * (-2246.256) (-2237.496) (-2244.424) [-2250.310] -- 0:12:36
50000 -- (-2249.210) [-2240.546] (-2246.978) (-2244.573) * (-2240.408) (-2265.049) [-2236.696] (-2255.542) -- 0:12:40
Average standard deviation of split frequencies: 0.036296
51000 -- (-2258.456) [-2239.339] (-2252.950) (-2252.048) * [-2237.861] (-2254.659) (-2236.566) (-2252.025) -- 0:12:42
52000 -- (-2247.557) (-2239.551) [-2240.397] (-2242.600) * (-2254.703) (-2239.088) [-2235.223] (-2250.367) -- 0:12:45
53000 -- (-2247.403) (-2242.543) (-2242.716) [-2236.195] * (-2241.297) [-2233.645] (-2246.447) (-2245.176) -- 0:12:48
54000 -- [-2246.753] (-2246.715) (-2233.263) (-2261.491) * (-2242.053) (-2241.728) (-2267.326) [-2244.261] -- 0:12:50
55000 -- (-2247.051) (-2237.641) [-2245.847] (-2252.040) * [-2234.589] (-2257.568) (-2256.671) (-2243.757) -- 0:12:53
Average standard deviation of split frequencies: 0.037580
56000 -- (-2268.741) [-2235.262] (-2245.799) (-2249.150) * (-2239.800) (-2250.823) [-2246.687] (-2243.946) -- 0:12:38
57000 -- [-2247.888] (-2257.287) (-2255.812) (-2233.757) * [-2245.369] (-2226.119) (-2255.140) (-2262.427) -- 0:12:41
58000 -- (-2263.785) (-2243.956) (-2241.569) [-2247.283] * (-2248.723) (-2245.723) (-2237.454) [-2245.980] -- 0:12:43
59000 -- [-2242.337] (-2232.297) (-2254.132) (-2247.680) * (-2262.897) (-2245.427) (-2241.059) [-2240.339] -- 0:12:45
60000 -- (-2255.894) (-2238.990) (-2257.980) [-2245.765] * (-2241.368) [-2246.528] (-2238.639) (-2251.253) -- 0:12:47
Average standard deviation of split frequencies: 0.033740
61000 -- [-2249.412] (-2236.981) (-2244.193) (-2254.062) * (-2234.476) [-2237.645] (-2245.208) (-2245.234) -- 0:12:49
62000 -- (-2248.592) [-2242.707] (-2231.950) (-2243.825) * (-2258.370) (-2251.547) (-2239.471) [-2246.180] -- 0:12:51
63000 -- (-2255.825) [-2244.970] (-2235.668) (-2249.046) * (-2236.121) (-2249.307) (-2255.945) [-2241.034] -- 0:12:53
64000 -- (-2256.145) (-2253.700) (-2252.519) [-2241.699] * (-2240.975) [-2247.958] (-2262.579) (-2234.993) -- 0:12:40
65000 -- (-2251.726) (-2244.368) (-2260.329) [-2233.424] * (-2233.589) [-2237.322] (-2258.413) (-2240.852) -- 0:12:42
Average standard deviation of split frequencies: 0.030977
66000 -- (-2245.486) [-2247.949] (-2257.598) (-2254.184) * (-2235.677) (-2238.787) (-2251.840) [-2236.097] -- 0:12:44
67000 -- [-2240.396] (-2246.564) (-2243.153) (-2259.783) * (-2247.860) (-2236.153) (-2224.872) [-2239.453] -- 0:12:45
68000 -- (-2240.653) (-2254.758) [-2243.583] (-2261.331) * [-2238.000] (-2242.770) (-2245.223) (-2255.693) -- 0:12:47
69000 -- [-2236.697] (-2244.236) (-2252.884) (-2255.665) * (-2233.496) [-2244.940] (-2253.827) (-2246.206) -- 0:12:49
70000 -- (-2243.533) (-2249.169) [-2243.504] (-2247.874) * (-2242.752) (-2240.423) (-2243.124) [-2237.717] -- 0:12:50
Average standard deviation of split frequencies: 0.029941
71000 -- (-2247.031) [-2240.151] (-2230.808) (-2248.394) * (-2245.225) (-2230.842) [-2228.246] (-2241.538) -- 0:12:51
72000 -- (-2255.851) (-2247.692) [-2232.335] (-2254.241) * (-2245.083) (-2261.606) [-2230.220] (-2255.188) -- 0:12:53
73000 -- (-2251.508) (-2235.172) [-2229.737] (-2246.991) * (-2242.528) [-2239.605] (-2252.721) (-2248.036) -- 0:12:41
74000 -- (-2257.809) (-2230.688) [-2243.816] (-2254.763) * (-2244.113) (-2239.808) [-2243.965] (-2246.077) -- 0:12:43
75000 -- (-2251.780) [-2234.671] (-2254.583) (-2257.911) * [-2234.435] (-2238.517) (-2244.178) (-2244.078) -- 0:12:44
Average standard deviation of split frequencies: 0.027734
76000 -- (-2261.981) (-2234.927) [-2237.209] (-2247.188) * (-2250.853) [-2237.547] (-2256.686) (-2258.617) -- 0:12:45
77000 -- (-2253.359) (-2245.316) [-2239.980] (-2241.095) * (-2253.946) [-2245.189] (-2238.434) (-2267.321) -- 0:12:47
78000 -- (-2245.869) (-2242.606) [-2240.515] (-2242.826) * (-2269.963) (-2254.557) (-2239.841) [-2239.366] -- 0:12:48
79000 -- (-2257.359) (-2264.196) [-2246.333] (-2237.526) * (-2241.458) (-2246.960) (-2249.983) [-2233.785] -- 0:12:49
80000 -- (-2254.198) (-2262.890) [-2236.888] (-2237.284) * (-2250.501) [-2246.317] (-2244.495) (-2233.244) -- 0:12:39
Average standard deviation of split frequencies: 0.026482
81000 -- (-2249.673) (-2242.984) [-2238.773] (-2243.036) * (-2247.945) (-2244.879) (-2244.886) [-2235.813] -- 0:12:40
82000 -- [-2251.150] (-2250.508) (-2251.540) (-2239.064) * (-2249.331) (-2247.968) (-2262.493) [-2240.682] -- 0:12:41
83000 -- [-2253.244] (-2261.392) (-2245.186) (-2240.685) * (-2240.565) (-2246.507) [-2245.600] (-2243.268) -- 0:12:42
84000 -- (-2247.574) [-2242.035] (-2235.918) (-2236.414) * (-2251.143) (-2254.664) (-2244.018) [-2236.384] -- 0:12:43
85000 -- (-2254.354) (-2237.151) [-2230.519] (-2248.283) * (-2254.152) [-2237.789] (-2240.174) (-2254.752) -- 0:12:44
Average standard deviation of split frequencies: 0.026053
86000 -- (-2237.829) (-2256.710) (-2253.473) [-2240.694] * (-2246.323) (-2237.747) (-2249.395) [-2251.953] -- 0:12:45
87000 -- (-2256.448) (-2253.494) [-2239.986] (-2245.017) * (-2245.386) (-2234.103) [-2234.031] (-2263.017) -- 0:12:35
88000 -- (-2262.845) (-2252.419) (-2238.025) [-2234.203] * [-2233.525] (-2237.226) (-2235.709) (-2244.057) -- 0:12:36
89000 -- (-2245.196) (-2248.940) (-2244.614) [-2237.002] * (-2245.502) [-2238.004] (-2240.662) (-2239.063) -- 0:12:37
90000 -- (-2235.477) [-2232.039] (-2250.779) (-2234.372) * (-2257.104) [-2233.920] (-2254.122) (-2252.149) -- 0:12:38
Average standard deviation of split frequencies: 0.023143
91000 -- (-2241.362) (-2238.937) [-2237.202] (-2241.653) * (-2252.119) (-2237.217) [-2239.039] (-2260.486) -- 0:12:39
92000 -- (-2244.180) (-2237.689) (-2248.776) [-2238.824] * (-2244.633) [-2241.858] (-2256.583) (-2257.835) -- 0:12:39
93000 -- [-2230.127] (-2250.339) (-2253.174) (-2238.689) * (-2246.131) (-2248.269) (-2250.160) [-2240.304] -- 0:12:40
94000 -- (-2235.965) (-2258.180) [-2233.659] (-2245.814) * (-2246.981) [-2230.931] (-2243.368) (-2234.661) -- 0:12:31
95000 -- [-2242.146] (-2249.050) (-2242.480) (-2248.158) * (-2236.545) (-2252.317) [-2244.134] (-2248.471) -- 0:12:32
Average standard deviation of split frequencies: 0.022252
96000 -- (-2258.201) (-2248.400) (-2256.922) [-2240.003] * [-2247.671] (-2246.991) (-2242.339) (-2251.865) -- 0:12:33
97000 -- (-2248.382) [-2246.570] (-2262.173) (-2258.243) * (-2250.610) (-2245.487) (-2239.819) [-2231.341] -- 0:12:34
98000 -- (-2235.949) (-2237.711) [-2235.824] (-2256.192) * (-2244.858) [-2234.777] (-2232.987) (-2245.389) -- 0:12:34
99000 -- (-2252.524) (-2253.513) (-2247.384) [-2237.539] * (-2248.030) (-2262.465) [-2228.365] (-2258.558) -- 0:12:35
100000 -- (-2249.724) (-2269.379) [-2241.840] (-2235.608) * (-2258.259) (-2254.957) [-2237.098] (-2233.393) -- 0:12:36
Average standard deviation of split frequencies: 0.020457
101000 -- [-2230.295] (-2259.316) (-2244.430) (-2241.141) * [-2246.547] (-2252.606) (-2240.148) (-2255.471) -- 0:12:27
102000 -- (-2247.229) (-2238.741) [-2235.843] (-2246.221) * (-2238.037) [-2233.728] (-2248.486) (-2244.863) -- 0:12:28
103000 -- (-2228.481) (-2249.336) (-2261.905) [-2241.997] * (-2248.488) (-2245.028) (-2239.733) [-2240.222] -- 0:12:28
104000 -- (-2247.693) (-2240.275) (-2254.112) [-2246.993] * (-2248.782) (-2245.975) [-2235.848] (-2246.287) -- 0:12:29
105000 -- (-2247.265) (-2246.913) [-2242.298] (-2255.931) * (-2254.235) (-2240.420) (-2240.776) [-2239.210] -- 0:12:30
Average standard deviation of split frequencies: 0.020068
106000 -- (-2247.371) [-2231.933] (-2252.381) (-2237.403) * (-2249.316) (-2242.461) (-2244.680) [-2244.964] -- 0:12:30
107000 -- (-2249.029) (-2267.525) [-2242.789] (-2234.904) * (-2255.248) (-2235.176) [-2237.286] (-2245.264) -- 0:12:22
108000 -- (-2253.535) [-2244.604] (-2259.870) (-2244.807) * [-2250.640] (-2245.986) (-2233.314) (-2260.874) -- 0:12:23
109000 -- [-2239.412] (-2251.175) (-2249.487) (-2258.726) * (-2244.928) (-2240.354) (-2250.182) [-2241.675] -- 0:12:23
110000 -- (-2270.421) (-2248.030) (-2246.577) [-2240.389] * (-2242.710) (-2255.997) (-2251.893) [-2240.519] -- 0:12:24
Average standard deviation of split frequencies: 0.020534
111000 -- (-2262.839) (-2239.532) (-2247.277) [-2240.299] * (-2256.816) (-2252.952) [-2251.571] (-2246.173) -- 0:12:24
112000 -- (-2255.819) [-2235.036] (-2254.730) (-2247.981) * (-2248.511) (-2245.014) (-2259.752) [-2237.885] -- 0:12:25
113000 -- [-2240.424] (-2243.195) (-2239.164) (-2253.605) * (-2241.806) (-2248.998) [-2247.509] (-2242.643) -- 0:12:25
114000 -- (-2252.605) [-2241.888] (-2234.747) (-2241.804) * (-2245.531) (-2245.953) [-2245.681] (-2263.314) -- 0:12:18
115000 -- [-2232.706] (-2251.185) (-2260.442) (-2238.501) * (-2247.324) [-2235.742] (-2239.130) (-2244.599) -- 0:12:18
Average standard deviation of split frequencies: 0.019398
116000 -- [-2240.903] (-2247.941) (-2242.211) (-2249.371) * (-2244.091) (-2245.287) [-2236.222] (-2257.339) -- 0:12:19
117000 -- (-2255.863) [-2248.659] (-2263.244) (-2250.386) * (-2247.122) (-2238.908) [-2235.434] (-2241.176) -- 0:12:19
118000 -- (-2248.775) [-2239.765] (-2258.205) (-2241.771) * (-2241.080) [-2231.383] (-2243.997) (-2234.782) -- 0:12:19
119000 -- [-2246.495] (-2245.187) (-2248.813) (-2244.903) * (-2244.606) [-2237.174] (-2233.039) (-2257.370) -- 0:12:12
120000 -- (-2254.469) [-2235.004] (-2258.271) (-2247.907) * (-2230.848) [-2226.846] (-2239.070) (-2248.379) -- 0:12:13
Average standard deviation of split frequencies: 0.020022
121000 -- [-2250.383] (-2232.863) (-2269.204) (-2245.619) * (-2243.586) [-2231.027] (-2255.385) (-2246.608) -- 0:12:06
122000 -- (-2228.561) [-2240.781] (-2248.322) (-2246.092) * (-2246.788) [-2237.805] (-2258.218) (-2243.660) -- 0:12:06
123000 -- (-2239.869) [-2257.269] (-2234.274) (-2260.536) * (-2258.202) (-2242.944) [-2253.834] (-2247.658) -- 0:12:07
124000 -- (-2248.112) [-2242.781] (-2238.444) (-2246.549) * [-2241.983] (-2255.669) (-2264.717) (-2246.946) -- 0:12:00
125000 -- (-2244.147) (-2242.446) [-2234.574] (-2260.949) * (-2243.616) (-2247.525) (-2252.665) [-2239.651] -- 0:12:01
Average standard deviation of split frequencies: 0.020193
126000 -- (-2236.852) (-2241.973) [-2232.890] (-2251.682) * (-2248.155) (-2241.134) [-2237.556] (-2243.989) -- 0:11:54
127000 -- (-2240.715) [-2242.872] (-2241.946) (-2264.041) * [-2242.956] (-2241.463) (-2243.420) (-2255.603) -- 0:11:54
128000 -- (-2244.628) (-2246.575) [-2236.761] (-2248.619) * (-2253.328) (-2239.892) [-2234.276] (-2246.267) -- 0:11:48
129000 -- [-2239.848] (-2257.067) (-2242.038) (-2242.423) * (-2252.003) (-2241.142) [-2230.329] (-2245.218) -- 0:11:48
130000 -- [-2250.093] (-2245.617) (-2254.662) (-2256.361) * (-2247.402) [-2234.416] (-2235.185) (-2251.560) -- 0:11:49
Average standard deviation of split frequencies: 0.019211
131000 -- (-2255.510) (-2241.221) (-2240.367) [-2239.283] * (-2260.201) (-2236.758) [-2237.055] (-2247.063) -- 0:11:43
132000 -- (-2253.002) [-2237.647] (-2232.249) (-2262.037) * [-2234.356] (-2251.502) (-2241.860) (-2243.428) -- 0:11:43
133000 -- (-2242.240) [-2253.531] (-2249.110) (-2254.268) * (-2240.934) (-2247.676) [-2234.981] (-2248.775) -- 0:11:37
134000 -- (-2238.485) (-2263.423) (-2242.986) [-2246.050] * (-2254.134) [-2240.611] (-2239.517) (-2255.454) -- 0:11:37
135000 -- [-2247.703] (-2270.837) (-2245.956) (-2245.057) * (-2249.408) (-2241.976) [-2233.131] (-2247.487) -- 0:11:38
Average standard deviation of split frequencies: 0.018691
136000 -- (-2250.488) (-2238.722) [-2238.901] (-2248.962) * (-2238.137) (-2240.940) [-2236.016] (-2245.732) -- 0:11:32
137000 -- [-2233.522] (-2242.223) (-2254.281) (-2251.556) * (-2249.272) (-2242.810) (-2250.554) [-2240.191] -- 0:11:32
138000 -- (-2242.804) (-2241.355) [-2245.014] (-2261.128) * [-2247.494] (-2247.113) (-2243.297) (-2244.015) -- 0:11:27
139000 -- (-2251.167) (-2248.337) (-2237.889) [-2239.575] * (-2253.180) (-2251.391) [-2235.650] (-2239.842) -- 0:11:27
140000 -- (-2248.362) (-2241.033) [-2236.950] (-2243.489) * (-2245.615) (-2244.515) (-2257.991) [-2235.313] -- 0:11:21
Average standard deviation of split frequencies: 0.017300
141000 -- (-2244.644) (-2247.887) (-2236.220) [-2239.526] * (-2239.275) (-2242.537) (-2268.236) [-2231.710] -- 0:11:22
142000 -- (-2252.568) (-2243.910) [-2229.709] (-2245.500) * (-2248.931) (-2238.763) (-2243.042) [-2243.555] -- 0:11:22
143000 -- (-2244.081) (-2247.010) [-2231.450] (-2253.744) * (-2262.297) [-2233.779] (-2236.771) (-2251.889) -- 0:11:17
144000 -- (-2236.569) [-2240.625] (-2234.910) (-2250.292) * (-2252.614) (-2244.222) [-2240.669] (-2256.478) -- 0:11:17
145000 -- (-2251.245) [-2239.698] (-2251.513) (-2250.273) * (-2240.620) [-2244.398] (-2246.656) (-2236.445) -- 0:11:18
Average standard deviation of split frequencies: 0.017291
146000 -- (-2245.171) [-2228.293] (-2239.155) (-2243.783) * (-2246.379) [-2238.465] (-2237.777) (-2253.919) -- 0:11:18
147000 -- [-2236.507] (-2243.749) (-2237.561) (-2280.104) * (-2242.684) [-2236.563] (-2243.778) (-2235.237) -- 0:11:18
148000 -- (-2242.508) (-2232.063) [-2239.814] (-2246.891) * (-2251.620) [-2247.834] (-2240.868) (-2256.110) -- 0:11:19
149000 -- [-2240.783] (-2241.340) (-2240.392) (-2242.313) * (-2244.313) (-2258.032) [-2233.723] (-2242.195) -- 0:11:19
150000 -- (-2255.015) (-2234.201) [-2233.133] (-2270.578) * (-2258.506) (-2239.525) [-2226.743] (-2234.688) -- 0:11:20
Average standard deviation of split frequencies: 0.016278
151000 -- [-2237.475] (-2233.077) (-2255.733) (-2259.509) * [-2249.209] (-2245.307) (-2242.839) (-2243.845) -- 0:11:14
152000 -- [-2237.480] (-2262.096) (-2251.775) (-2243.528) * (-2248.802) [-2234.707] (-2233.692) (-2248.627) -- 0:11:15
153000 -- [-2235.157] (-2258.237) (-2248.758) (-2250.413) * [-2246.817] (-2239.796) (-2241.036) (-2247.517) -- 0:11:15
154000 -- (-2244.886) (-2248.018) (-2250.550) [-2245.045] * (-2256.876) (-2238.223) [-2235.105] (-2242.558) -- 0:11:15
155000 -- (-2245.321) [-2241.383] (-2241.137) (-2258.336) * [-2239.766] (-2241.527) (-2240.245) (-2243.568) -- 0:11:16
Average standard deviation of split frequencies: 0.015955
156000 -- (-2243.359) (-2247.650) [-2238.687] (-2255.782) * (-2234.599) (-2249.911) (-2235.986) [-2246.728] -- 0:11:16
157000 -- (-2257.178) (-2263.437) (-2244.727) [-2238.742] * (-2248.644) (-2250.304) (-2240.926) [-2250.941] -- 0:11:11
158000 -- (-2239.414) (-2247.955) [-2238.458] (-2244.811) * (-2245.153) (-2247.832) (-2254.103) [-2241.638] -- 0:11:11
159000 -- (-2251.033) (-2254.891) (-2269.200) [-2232.112] * [-2250.050] (-2265.301) (-2246.740) (-2242.054) -- 0:11:11
160000 -- (-2241.575) (-2247.526) (-2247.409) [-2237.626] * [-2243.786] (-2237.409) (-2251.246) (-2244.084) -- 0:11:12
Average standard deviation of split frequencies: 0.017247
161000 -- [-2243.637] (-2253.550) (-2241.530) (-2246.299) * (-2240.313) [-2235.601] (-2244.791) (-2278.797) -- 0:11:12
162000 -- (-2239.548) (-2244.549) [-2232.423] (-2240.418) * (-2246.267) (-2248.478) (-2236.740) [-2239.638] -- 0:11:12
163000 -- (-2240.908) (-2237.290) [-2232.048] (-2248.355) * (-2242.560) (-2257.300) (-2247.077) [-2227.526] -- 0:11:07
164000 -- [-2248.029] (-2243.258) (-2237.007) (-2249.085) * (-2239.714) (-2251.845) (-2255.427) [-2240.100] -- 0:11:07
165000 -- (-2249.537) (-2239.432) (-2250.701) [-2235.433] * (-2243.111) (-2253.151) (-2246.918) [-2229.093] -- 0:11:08
Average standard deviation of split frequencies: 0.016319
166000 -- [-2242.359] (-2236.521) (-2248.600) (-2242.036) * (-2244.162) (-2261.262) (-2269.257) [-2235.670] -- 0:11:08
167000 -- (-2250.321) [-2240.570] (-2240.148) (-2256.236) * [-2239.355] (-2258.066) (-2249.281) (-2240.180) -- 0:11:08
168000 -- (-2245.027) (-2248.413) [-2233.435] (-2239.430) * (-2256.429) [-2247.534] (-2258.738) (-2237.679) -- 0:11:03
169000 -- [-2247.102] (-2245.774) (-2258.330) (-2260.070) * (-2243.905) [-2244.049] (-2243.845) (-2233.735) -- 0:11:03
170000 -- (-2245.593) [-2245.378] (-2258.195) (-2252.469) * (-2252.144) (-2242.822) (-2261.175) [-2248.286] -- 0:11:04
Average standard deviation of split frequencies: 0.016057
171000 -- [-2236.222] (-2241.956) (-2243.769) (-2254.046) * (-2249.406) [-2233.503] (-2238.156) (-2248.571) -- 0:11:04
172000 -- [-2233.227] (-2233.009) (-2252.310) (-2242.648) * [-2243.533] (-2243.746) (-2248.110) (-2241.503) -- 0:11:04
173000 -- [-2229.238] (-2249.027) (-2242.277) (-2242.134) * (-2240.625) [-2240.210] (-2245.101) (-2246.972) -- 0:10:59
174000 -- [-2242.746] (-2248.666) (-2251.561) (-2251.520) * (-2244.620) (-2240.615) [-2233.913] (-2251.171) -- 0:10:59
175000 -- (-2239.681) (-2243.934) (-2244.703) [-2250.944] * [-2237.608] (-2243.324) (-2238.287) (-2258.968) -- 0:11:00
Average standard deviation of split frequencies: 0.016282
176000 -- (-2234.239) (-2244.023) [-2236.761] (-2258.489) * [-2237.629] (-2252.534) (-2232.264) (-2244.233) -- 0:10:55
177000 -- [-2236.524] (-2241.464) (-2245.369) (-2253.160) * (-2246.530) (-2239.017) (-2241.831) [-2241.002] -- 0:10:55
178000 -- (-2267.790) (-2241.377) (-2247.859) [-2247.957] * (-2241.504) (-2246.367) [-2228.617] (-2262.270) -- 0:10:55
179000 -- (-2245.679) (-2244.929) (-2249.779) [-2229.435] * (-2244.710) (-2239.060) (-2242.268) [-2252.827] -- 0:10:51
180000 -- [-2249.075] (-2248.297) (-2241.722) (-2250.781) * [-2233.485] (-2246.061) (-2241.643) (-2258.544) -- 0:10:51
Average standard deviation of split frequencies: 0.015977
181000 -- (-2247.819) (-2238.752) [-2235.565] (-2248.142) * (-2233.151) (-2246.585) [-2241.883] (-2255.868) -- 0:10:51
182000 -- (-2255.067) (-2232.929) [-2236.168] (-2250.421) * [-2235.721] (-2258.447) (-2235.016) (-2237.098) -- 0:10:51
183000 -- (-2251.122) (-2230.581) [-2230.895] (-2243.568) * (-2254.128) (-2261.251) [-2240.973] (-2251.602) -- 0:10:51
184000 -- (-2252.429) (-2236.581) [-2229.911] (-2258.581) * [-2234.401] (-2265.306) (-2247.623) (-2238.828) -- 0:10:51
185000 -- (-2247.572) [-2231.845] (-2247.132) (-2251.496) * (-2243.126) (-2243.310) (-2241.180) [-2242.975] -- 0:10:52
Average standard deviation of split frequencies: 0.015740
186000 -- (-2265.337) (-2241.309) (-2242.000) [-2249.509] * [-2233.947] (-2238.719) (-2247.855) (-2239.325) -- 0:10:52
187000 -- (-2259.235) [-2231.206] (-2240.198) (-2261.645) * [-2240.176] (-2262.219) (-2247.871) (-2233.601) -- 0:10:52
188000 -- (-2256.521) (-2247.788) [-2235.170] (-2251.591) * [-2248.092] (-2243.544) (-2243.965) (-2237.198) -- 0:10:47
189000 -- [-2231.489] (-2258.539) (-2240.766) (-2270.524) * (-2257.012) (-2240.906) (-2244.253) [-2234.256] -- 0:10:47
190000 -- [-2232.328] (-2243.990) (-2233.943) (-2246.403) * [-2242.931] (-2253.463) (-2248.547) (-2254.429) -- 0:10:48
Average standard deviation of split frequencies: 0.015693
191000 -- [-2235.500] (-2238.794) (-2245.713) (-2242.343) * (-2247.358) [-2239.795] (-2239.878) (-2251.246) -- 0:10:43
192000 -- [-2243.152] (-2245.890) (-2246.791) (-2237.821) * (-2259.759) (-2244.404) [-2241.980] (-2247.632) -- 0:10:43
193000 -- (-2241.855) (-2251.945) [-2238.970] (-2245.094) * (-2242.608) (-2242.355) (-2253.628) [-2236.719] -- 0:10:39
194000 -- [-2234.075] (-2253.964) (-2238.684) (-2245.244) * (-2240.192) (-2239.429) (-2258.551) [-2233.507] -- 0:10:39
195000 -- (-2240.540) (-2250.395) (-2237.035) [-2252.359] * (-2243.295) (-2250.635) (-2254.929) [-2234.815] -- 0:10:35
Average standard deviation of split frequencies: 0.016468
196000 -- (-2249.943) (-2247.464) (-2242.801) [-2242.303] * (-2247.433) (-2274.489) (-2254.428) [-2233.009] -- 0:10:35
197000 -- (-2249.163) [-2240.229] (-2238.315) (-2242.061) * (-2260.388) (-2248.690) (-2245.163) [-2238.281] -- 0:10:35
198000 -- (-2247.266) (-2236.471) [-2233.947] (-2242.439) * (-2254.775) (-2251.395) [-2243.816] (-2244.145) -- 0:10:31
199000 -- (-2246.882) (-2238.942) [-2241.047] (-2245.144) * (-2251.000) (-2246.366) (-2247.840) [-2246.861] -- 0:10:31
200000 -- (-2240.957) (-2249.555) [-2239.309] (-2245.413) * (-2244.629) (-2235.455) [-2249.378] (-2249.548) -- 0:10:28
Average standard deviation of split frequencies: 0.016142
201000 -- (-2249.970) (-2260.750) [-2231.734] (-2243.489) * (-2254.716) (-2234.248) [-2244.394] (-2253.455) -- 0:10:28
202000 -- (-2244.819) (-2259.232) (-2229.472) [-2243.815] * (-2259.528) [-2235.586] (-2238.790) (-2258.799) -- 0:10:24
203000 -- (-2240.662) (-2247.832) (-2243.193) [-2231.847] * (-2243.544) [-2240.435] (-2237.006) (-2258.625) -- 0:10:24
204000 -- [-2235.523] (-2253.453) (-2246.325) (-2233.306) * (-2249.235) (-2248.988) [-2235.812] (-2240.360) -- 0:10:24
205000 -- [-2237.730] (-2257.504) (-2237.883) (-2249.957) * (-2248.305) (-2257.261) [-2241.876] (-2244.210) -- 0:10:20
Average standard deviation of split frequencies: 0.016202
206000 -- (-2246.160) [-2238.303] (-2257.727) (-2253.550) * [-2235.667] (-2251.499) (-2248.249) (-2239.240) -- 0:10:20
207000 -- (-2244.559) (-2242.460) (-2251.815) [-2238.252] * (-2245.165) (-2237.489) (-2245.577) [-2244.578] -- 0:10:20
208000 -- (-2245.210) [-2235.176] (-2259.535) (-2248.072) * (-2245.257) (-2242.361) (-2260.438) [-2261.316] -- 0:10:16
209000 -- (-2248.876) [-2233.035] (-2265.345) (-2249.121) * (-2243.812) (-2247.344) (-2234.256) [-2246.132] -- 0:10:16
210000 -- (-2278.533) (-2241.415) (-2248.574) [-2241.102] * [-2238.256] (-2248.485) (-2252.291) (-2249.555) -- 0:10:16
Average standard deviation of split frequencies: 0.017055
211000 -- (-2249.626) [-2249.268] (-2244.007) (-2260.128) * (-2241.284) [-2238.895] (-2249.763) (-2243.447) -- 0:10:13
212000 -- (-2251.562) (-2254.521) (-2244.024) [-2244.219] * (-2251.797) [-2230.665] (-2257.433) (-2240.470) -- 0:10:13
213000 -- [-2237.498] (-2249.250) (-2245.622) (-2239.454) * (-2242.216) [-2240.281] (-2243.653) (-2248.461) -- 0:10:09
214000 -- (-2239.603) (-2234.790) [-2233.764] (-2246.514) * (-2240.944) [-2234.217] (-2243.447) (-2238.493) -- 0:10:09
215000 -- (-2252.973) (-2241.109) [-2227.560] (-2243.731) * [-2235.243] (-2257.681) (-2243.342) (-2251.930) -- 0:10:06
Average standard deviation of split frequencies: 0.017065
216000 -- (-2233.269) [-2233.845] (-2250.345) (-2251.287) * [-2233.965] (-2248.664) (-2237.380) (-2248.031) -- 0:10:06
217000 -- (-2266.447) (-2236.006) [-2236.229] (-2261.149) * (-2252.216) (-2243.038) (-2254.923) [-2249.965] -- 0:10:06
218000 -- (-2243.422) [-2239.679] (-2236.857) (-2251.988) * (-2237.598) [-2238.350] (-2268.299) (-2253.470) -- 0:10:06
219000 -- (-2235.007) (-2249.504) (-2233.315) [-2248.572] * (-2249.367) [-2239.975] (-2246.333) (-2261.512) -- 0:10:06
220000 -- (-2236.520) (-2247.770) (-2232.395) [-2236.053] * (-2236.852) [-2235.593] (-2255.047) (-2250.348) -- 0:10:06
Average standard deviation of split frequencies: 0.017000
221000 -- (-2241.593) (-2244.059) (-2253.061) [-2237.166] * (-2258.305) [-2233.652] (-2237.982) (-2253.710) -- 0:10:02
222000 -- (-2254.294) [-2237.393] (-2239.017) (-2234.422) * (-2250.943) [-2238.666] (-2247.132) (-2257.625) -- 0:10:02
223000 -- (-2255.179) (-2250.447) [-2233.125] (-2240.843) * [-2245.554] (-2248.231) (-2245.114) (-2249.309) -- 0:10:02
224000 -- (-2253.723) (-2252.090) (-2241.316) [-2237.660] * (-2255.465) (-2256.638) [-2232.111] (-2243.126) -- 0:10:02
225000 -- (-2246.970) (-2248.510) (-2244.312) [-2236.340] * (-2244.175) (-2251.600) [-2241.286] (-2246.606) -- 0:10:02
Average standard deviation of split frequencies: 0.016107
226000 -- (-2254.327) (-2234.455) (-2252.776) [-2241.874] * [-2229.424] (-2246.654) (-2234.993) (-2244.296) -- 0:09:59
227000 -- (-2274.066) [-2229.729] (-2254.610) (-2247.837) * [-2235.149] (-2262.193) (-2253.315) (-2238.001) -- 0:09:59
228000 -- (-2245.579) [-2230.598] (-2243.185) (-2251.618) * (-2250.338) (-2241.508) (-2246.464) [-2237.475] -- 0:09:59
229000 -- (-2256.704) (-2238.631) [-2251.938] (-2260.414) * [-2241.452] (-2238.810) (-2246.035) (-2245.498) -- 0:09:59
230000 -- (-2254.851) (-2245.738) (-2250.583) [-2242.408] * (-2253.704) [-2239.667] (-2265.994) (-2247.948) -- 0:09:59
Average standard deviation of split frequencies: 0.016433
231000 -- [-2238.178] (-2251.351) (-2245.655) (-2248.201) * (-2240.205) [-2240.311] (-2264.783) (-2260.049) -- 0:09:59
232000 -- [-2236.847] (-2257.526) (-2243.138) (-2246.073) * (-2237.579) [-2238.985] (-2240.550) (-2257.082) -- 0:09:59
233000 -- (-2251.314) (-2254.769) (-2234.940) [-2239.829] * (-2233.746) [-2251.889] (-2252.958) (-2243.180) -- 0:09:55
234000 -- (-2253.281) [-2242.532] (-2246.698) (-2250.449) * (-2244.673) [-2247.095] (-2237.317) (-2253.977) -- 0:09:55
235000 -- (-2250.577) [-2237.432] (-2244.009) (-2246.106) * (-2248.935) (-2246.488) (-2240.364) [-2237.642] -- 0:09:55
Average standard deviation of split frequencies: 0.015542
236000 -- (-2238.026) [-2249.258] (-2250.191) (-2250.117) * [-2234.831] (-2243.401) (-2261.126) (-2240.539) -- 0:09:55
237000 -- [-2233.271] (-2254.313) (-2247.066) (-2253.257) * (-2242.997) (-2257.568) (-2248.462) [-2241.499] -- 0:09:55
238000 -- [-2236.027] (-2262.334) (-2256.348) (-2261.477) * (-2243.206) (-2235.529) (-2241.915) [-2228.481] -- 0:09:55
239000 -- (-2235.415) [-2254.015] (-2249.198) (-2262.624) * (-2237.935) (-2231.027) (-2263.026) [-2242.930] -- 0:09:52
240000 -- (-2242.356) [-2251.542] (-2251.483) (-2248.856) * (-2242.061) (-2258.801) (-2248.518) [-2233.272] -- 0:09:52
Average standard deviation of split frequencies: 0.015194
241000 -- (-2248.526) [-2240.685] (-2244.358) (-2247.008) * (-2251.334) (-2238.352) (-2246.210) [-2234.068] -- 0:09:52
242000 -- (-2244.319) [-2238.625] (-2241.611) (-2279.320) * (-2241.458) (-2236.995) (-2244.410) [-2235.753] -- 0:09:51
243000 -- (-2258.641) (-2243.732) [-2239.620] (-2249.107) * (-2244.092) [-2237.608] (-2256.348) (-2244.082) -- 0:09:51
244000 -- (-2250.668) (-2236.508) [-2234.427] (-2248.919) * (-2236.071) [-2239.519] (-2259.001) (-2255.459) -- 0:09:51
245000 -- (-2245.824) [-2242.783] (-2257.611) (-2243.009) * (-2240.804) [-2234.698] (-2263.059) (-2260.495) -- 0:09:51
Average standard deviation of split frequencies: 0.015330
246000 -- (-2242.383) (-2251.936) (-2253.082) [-2239.865] * (-2240.481) [-2244.629] (-2255.635) (-2247.500) -- 0:09:48
247000 -- (-2248.832) (-2249.971) (-2242.152) [-2243.293] * [-2238.438] (-2241.476) (-2252.688) (-2245.503) -- 0:09:48
248000 -- (-2241.558) (-2249.919) [-2232.280] (-2244.251) * [-2231.307] (-2249.458) (-2244.325) (-2236.950) -- 0:09:48
249000 -- (-2251.679) (-2240.216) [-2239.440] (-2260.521) * (-2241.203) (-2243.154) (-2247.757) [-2237.029] -- 0:09:48
250000 -- (-2225.831) (-2247.047) (-2241.851) [-2248.138] * (-2263.449) (-2238.786) (-2242.168) [-2232.236] -- 0:09:48
Average standard deviation of split frequencies: 0.014527
251000 -- [-2249.617] (-2256.225) (-2244.107) (-2243.775) * (-2245.302) [-2239.521] (-2247.227) (-2249.300) -- 0:09:47
252000 -- (-2246.376) (-2244.468) [-2229.758] (-2261.540) * (-2257.525) (-2236.911) [-2240.722] (-2230.479) -- 0:09:47
253000 -- (-2254.174) (-2252.535) [-2239.611] (-2255.044) * (-2249.300) [-2239.069] (-2238.597) (-2244.452) -- 0:09:44
254000 -- (-2235.997) (-2254.224) [-2228.031] (-2254.854) * (-2250.438) (-2251.384) (-2250.605) [-2239.440] -- 0:09:44
255000 -- (-2250.765) (-2253.901) [-2233.830] (-2246.669) * (-2257.495) [-2245.045] (-2242.233) (-2237.701) -- 0:09:44
Average standard deviation of split frequencies: 0.014304
256000 -- (-2259.714) (-2241.063) [-2230.375] (-2256.091) * (-2246.406) (-2243.776) (-2245.882) [-2234.898] -- 0:09:44
257000 -- (-2259.201) [-2234.365] (-2242.508) (-2244.615) * (-2240.497) (-2261.467) (-2249.352) [-2234.935] -- 0:09:43
258000 -- (-2254.993) [-2247.309] (-2249.193) (-2244.425) * (-2250.584) [-2252.940] (-2243.284) (-2252.355) -- 0:09:43
259000 -- [-2252.061] (-2245.556) (-2248.305) (-2260.779) * (-2249.772) (-2264.195) [-2248.549] (-2244.711) -- 0:09:40
260000 -- (-2248.712) (-2259.108) [-2244.097] (-2253.752) * (-2261.493) (-2249.192) [-2245.629] (-2239.188) -- 0:09:40
Average standard deviation of split frequencies: 0.014441
261000 -- (-2257.676) (-2254.150) [-2241.869] (-2237.152) * (-2244.469) (-2237.293) (-2245.010) [-2235.893] -- 0:09:40
262000 -- (-2247.165) (-2247.293) (-2251.258) [-2237.253] * (-2240.715) (-2251.887) (-2263.363) [-2241.400] -- 0:09:40
263000 -- (-2234.472) (-2239.895) (-2246.921) [-2240.042] * (-2245.895) (-2260.329) (-2237.488) [-2239.896] -- 0:09:40
264000 -- [-2243.384] (-2246.931) (-2247.000) (-2263.284) * (-2258.842) (-2277.606) (-2236.976) [-2239.945] -- 0:09:37
265000 -- (-2241.563) [-2237.080] (-2244.021) (-2244.514) * [-2235.094] (-2252.394) (-2246.101) (-2243.034) -- 0:09:36
Average standard deviation of split frequencies: 0.014228
266000 -- (-2232.106) [-2242.090] (-2246.703) (-2243.368) * (-2246.944) [-2240.243] (-2251.493) (-2241.478) -- 0:09:36
267000 -- (-2260.178) (-2245.323) [-2250.296] (-2244.969) * (-2250.428) [-2229.643] (-2244.413) (-2235.098) -- 0:09:36
268000 -- [-2247.118] (-2251.781) (-2244.890) (-2244.804) * (-2242.945) (-2241.708) (-2247.929) [-2240.987] -- 0:09:36
269000 -- (-2257.852) (-2232.361) (-2249.011) [-2245.584] * [-2235.087] (-2239.425) (-2242.105) (-2253.853) -- 0:09:36
270000 -- (-2254.776) [-2230.565] (-2260.872) (-2231.683) * (-2255.264) [-2241.479] (-2243.787) (-2239.161) -- 0:09:35
Average standard deviation of split frequencies: 0.014842
271000 -- (-2251.004) (-2241.587) [-2240.971] (-2244.693) * (-2253.578) [-2241.544] (-2265.074) (-2239.325) -- 0:09:32
272000 -- (-2255.055) [-2250.540] (-2241.277) (-2240.831) * (-2263.647) [-2231.598] (-2259.014) (-2238.716) -- 0:09:32
273000 -- (-2253.341) (-2243.142) [-2244.749] (-2237.931) * (-2238.714) (-2255.361) (-2249.926) [-2233.535] -- 0:09:32
274000 -- (-2242.917) (-2243.403) [-2240.851] (-2243.232) * (-2246.585) [-2233.647] (-2251.573) (-2243.074) -- 0:09:32
275000 -- (-2238.723) [-2230.979] (-2239.767) (-2256.710) * (-2251.164) [-2232.371] (-2266.492) (-2263.301) -- 0:09:32
Average standard deviation of split frequencies: 0.015006
276000 -- [-2245.065] (-2245.290) (-2242.208) (-2245.109) * (-2242.850) (-2235.696) [-2252.104] (-2244.702) -- 0:09:31
277000 -- (-2244.674) (-2244.677) (-2252.373) [-2232.616] * (-2260.090) [-2239.886] (-2252.966) (-2244.861) -- 0:09:31
278000 -- (-2235.702) (-2227.664) (-2265.481) [-2236.932] * (-2258.321) [-2239.022] (-2248.868) (-2242.192) -- 0:09:28
279000 -- (-2236.895) [-2234.214] (-2262.893) (-2246.939) * (-2247.000) [-2236.919] (-2247.149) (-2236.665) -- 0:09:28
280000 -- (-2247.034) [-2247.561] (-2253.472) (-2249.467) * [-2237.019] (-2233.330) (-2251.954) (-2252.638) -- 0:09:28
Average standard deviation of split frequencies: 0.014790
281000 -- (-2247.708) (-2247.773) (-2238.093) [-2242.678] * (-2237.745) (-2242.406) [-2249.606] (-2254.206) -- 0:09:28
282000 -- (-2247.352) (-2242.521) (-2245.892) [-2233.553] * (-2237.890) [-2238.521] (-2255.889) (-2257.113) -- 0:09:25
283000 -- (-2239.950) [-2233.276] (-2249.551) (-2259.445) * (-2242.121) [-2233.708] (-2245.391) (-2240.353) -- 0:09:24
284000 -- (-2252.464) [-2234.410] (-2241.234) (-2247.372) * [-2232.140] (-2254.384) (-2256.338) (-2237.910) -- 0:09:24
285000 -- (-2250.643) (-2245.404) [-2232.095] (-2253.556) * [-2232.729] (-2245.986) (-2252.401) (-2243.770) -- 0:09:24
Average standard deviation of split frequencies: 0.014575
286000 -- [-2239.604] (-2249.837) (-2242.036) (-2245.659) * [-2237.077] (-2238.518) (-2250.793) (-2256.329) -- 0:09:21
287000 -- (-2242.538) (-2245.609) (-2233.906) [-2243.774] * [-2249.045] (-2252.757) (-2244.809) (-2255.318) -- 0:09:21
288000 -- (-2254.847) (-2245.174) [-2233.351] (-2245.084) * (-2262.318) (-2251.800) (-2244.388) [-2234.621] -- 0:09:21
289000 -- (-2252.743) [-2234.945] (-2241.246) (-2248.182) * (-2250.558) (-2248.216) (-2244.529) [-2242.553] -- 0:09:20
290000 -- (-2239.741) [-2235.970] (-2249.370) (-2246.872) * (-2255.392) (-2243.334) (-2251.760) [-2250.332] -- 0:09:20
Average standard deviation of split frequencies: 0.014375
291000 -- (-2232.702) (-2253.433) [-2234.052] (-2261.653) * [-2239.302] (-2259.179) (-2252.800) (-2242.523) -- 0:09:20
292000 -- (-2244.224) (-2244.457) [-2242.008] (-2242.207) * [-2238.480] (-2240.693) (-2266.779) (-2250.113) -- 0:09:17
293000 -- [-2235.628] (-2257.743) (-2247.558) (-2240.824) * [-2242.609] (-2253.163) (-2246.316) (-2254.327) -- 0:09:17
294000 -- [-2239.450] (-2253.221) (-2236.946) (-2247.857) * (-2268.711) (-2236.502) (-2240.273) [-2247.846] -- 0:09:17
295000 -- (-2255.335) (-2247.460) [-2247.703] (-2235.098) * (-2238.707) (-2234.569) [-2239.299] (-2248.540) -- 0:09:16
Average standard deviation of split frequencies: 0.014143
296000 -- (-2260.176) (-2244.916) [-2235.761] (-2240.366) * [-2240.681] (-2247.574) (-2256.523) (-2250.872) -- 0:09:16
297000 -- (-2248.662) (-2264.985) [-2244.143] (-2244.408) * (-2254.437) [-2231.175] (-2251.780) (-2239.817) -- 0:09:16
298000 -- (-2236.982) (-2248.421) [-2241.038] (-2248.106) * (-2237.753) (-2243.775) (-2249.347) [-2245.258] -- 0:09:15
299000 -- (-2261.230) (-2256.285) [-2243.805] (-2243.758) * (-2240.366) [-2242.474] (-2247.629) (-2256.146) -- 0:09:13
300000 -- (-2248.050) (-2266.606) [-2244.663] (-2244.829) * (-2253.211) (-2240.118) (-2259.980) [-2237.909] -- 0:09:13
Average standard deviation of split frequencies: 0.014738
301000 -- (-2249.017) (-2249.059) [-2240.786] (-2232.579) * (-2239.567) (-2254.276) (-2251.236) [-2244.646] -- 0:09:12
302000 -- (-2242.188) (-2242.917) [-2250.024] (-2253.737) * [-2232.372] (-2254.594) (-2243.937) (-2241.141) -- 0:09:12
303000 -- (-2249.349) [-2237.775] (-2235.400) (-2241.588) * (-2234.686) [-2230.835] (-2243.239) (-2249.063) -- 0:09:12
304000 -- (-2260.230) (-2243.139) [-2240.765] (-2257.608) * (-2245.764) (-2270.975) [-2244.364] (-2233.143) -- 0:09:11
305000 -- (-2253.905) (-2264.649) (-2242.250) [-2243.866] * (-2240.466) (-2269.643) (-2244.007) [-2231.948] -- 0:09:11
Average standard deviation of split frequencies: 0.013381
306000 -- (-2245.841) (-2240.598) (-2251.552) [-2227.877] * [-2237.677] (-2236.360) (-2271.765) (-2251.630) -- 0:09:08
307000 -- (-2234.154) (-2242.244) (-2261.415) [-2232.185] * [-2237.873] (-2238.165) (-2255.640) (-2258.894) -- 0:09:08
308000 -- (-2248.273) [-2234.138] (-2239.590) (-2235.438) * (-2265.711) [-2246.614] (-2267.270) (-2248.620) -- 0:09:08
309000 -- (-2243.813) (-2247.537) (-2252.501) [-2231.656] * (-2251.020) (-2239.461) [-2239.681] (-2243.707) -- 0:09:07
310000 -- [-2230.799] (-2243.630) (-2247.422) (-2240.099) * (-2274.528) (-2237.098) [-2241.676] (-2244.738) -- 0:09:07
Average standard deviation of split frequencies: 0.013770
311000 -- [-2241.656] (-2250.820) (-2243.737) (-2245.241) * (-2248.060) (-2235.855) (-2252.416) [-2239.139] -- 0:09:07
312000 -- (-2246.892) (-2239.229) (-2242.710) [-2232.133] * (-2242.560) (-2232.099) (-2262.737) [-2233.975] -- 0:09:04
313000 -- (-2258.213) (-2260.363) [-2239.908] (-2240.185) * [-2237.058] (-2234.467) (-2261.109) (-2240.062) -- 0:09:04
314000 -- (-2250.109) (-2252.314) (-2256.395) [-2243.006] * (-2247.857) (-2239.983) (-2242.939) [-2239.836] -- 0:09:01
315000 -- (-2257.385) (-2251.734) (-2247.956) [-2238.910] * (-2244.317) (-2250.052) (-2251.934) [-2240.337] -- 0:09:01
Average standard deviation of split frequencies: 0.013953
316000 -- (-2241.967) [-2245.477] (-2257.624) (-2235.513) * [-2234.343] (-2248.663) (-2242.267) (-2245.759) -- 0:08:58
317000 -- (-2234.180) (-2246.443) [-2244.643] (-2243.751) * (-2235.858) (-2243.090) [-2242.193] (-2246.392) -- 0:08:58
318000 -- [-2240.853] (-2248.737) (-2250.139) (-2234.332) * (-2232.934) (-2249.309) [-2231.679] (-2241.535) -- 0:08:58
319000 -- [-2240.103] (-2236.101) (-2262.189) (-2236.645) * [-2231.565] (-2250.493) (-2231.760) (-2250.240) -- 0:08:55
320000 -- [-2236.594] (-2254.754) (-2244.295) (-2234.809) * [-2226.249] (-2251.511) (-2239.483) (-2251.172) -- 0:08:55
Average standard deviation of split frequencies: 0.013977
321000 -- [-2239.369] (-2248.826) (-2244.139) (-2241.147) * (-2242.391) (-2263.516) [-2239.594] (-2257.163) -- 0:08:55
322000 -- (-2241.631) (-2242.230) (-2244.304) [-2242.440] * [-2236.336] (-2245.625) (-2240.485) (-2259.844) -- 0:08:54
323000 -- (-2240.888) (-2238.238) (-2240.193) [-2237.119] * (-2234.819) (-2255.746) [-2231.488] (-2255.092) -- 0:08:54
324000 -- (-2242.073) [-2246.469] (-2246.318) (-2238.378) * (-2254.608) [-2242.111] (-2245.345) (-2247.025) -- 0:08:54
325000 -- (-2248.685) [-2229.647] (-2246.587) (-2240.996) * (-2255.737) [-2235.229] (-2235.792) (-2250.778) -- 0:08:51
Average standard deviation of split frequencies: 0.013985
326000 -- [-2235.200] (-2243.961) (-2253.275) (-2229.932) * (-2258.280) (-2246.861) (-2247.591) [-2235.298] -- 0:08:51
327000 -- (-2243.728) (-2251.879) (-2263.829) [-2238.100] * [-2236.707] (-2241.390) (-2246.796) (-2241.608) -- 0:08:48
328000 -- (-2244.982) [-2242.400] (-2246.494) (-2247.153) * [-2233.545] (-2241.103) (-2232.473) (-2251.300) -- 0:08:48
329000 -- [-2243.285] (-2257.348) (-2247.430) (-2253.109) * (-2242.876) (-2252.459) [-2241.359] (-2236.352) -- 0:08:48
330000 -- (-2249.170) (-2252.616) [-2242.232] (-2251.346) * (-2256.293) (-2263.444) [-2238.503] (-2249.007) -- 0:08:47
Average standard deviation of split frequencies: 0.013554
331000 -- [-2241.987] (-2247.559) (-2260.196) (-2241.265) * (-2248.718) (-2248.787) [-2234.171] (-2239.884) -- 0:08:47
332000 -- (-2244.852) [-2239.388] (-2277.705) (-2239.361) * [-2231.105] (-2250.442) (-2235.232) (-2246.459) -- 0:08:47
333000 -- (-2250.564) (-2252.470) (-2264.978) [-2239.974] * [-2231.107] (-2246.010) (-2239.400) (-2240.493) -- 0:08:46
334000 -- [-2229.593] (-2250.307) (-2258.305) (-2246.779) * (-2241.733) (-2242.758) [-2240.639] (-2238.663) -- 0:08:44
335000 -- [-2237.361] (-2241.748) (-2261.927) (-2249.162) * (-2242.236) [-2234.047] (-2233.619) (-2244.288) -- 0:08:44
Average standard deviation of split frequencies: 0.014094
336000 -- [-2236.312] (-2236.579) (-2249.548) (-2244.715) * (-2241.123) (-2248.914) [-2232.489] (-2243.670) -- 0:08:43
337000 -- [-2230.983] (-2243.391) (-2250.047) (-2254.449) * (-2236.051) (-2251.306) [-2228.342] (-2240.999) -- 0:08:41
338000 -- (-2241.550) [-2232.689] (-2245.463) (-2268.040) * [-2249.885] (-2250.416) (-2239.197) (-2240.833) -- 0:08:40
339000 -- (-2259.043) [-2228.636] (-2249.826) (-2244.648) * [-2253.557] (-2245.269) (-2253.429) (-2237.596) -- 0:08:38
340000 -- (-2242.077) [-2226.838] (-2249.731) (-2240.302) * (-2242.752) (-2242.809) (-2249.325) [-2236.133] -- 0:08:38
Average standard deviation of split frequencies: 0.013943
341000 -- (-2242.068) (-2239.223) (-2249.161) [-2233.373] * [-2242.367] (-2244.973) (-2251.868) (-2234.458) -- 0:08:35
342000 -- (-2252.259) [-2228.671] (-2255.562) (-2249.452) * (-2242.543) (-2255.309) (-2258.109) [-2247.025] -- 0:08:35
343000 -- (-2247.512) (-2235.951) (-2246.587) [-2237.071] * (-2247.019) (-2244.002) [-2241.857] (-2259.674) -- 0:08:35
344000 -- (-2260.307) (-2238.511) (-2251.559) [-2227.043] * (-2248.296) (-2245.668) (-2240.496) [-2251.982] -- 0:08:32
345000 -- (-2247.548) (-2250.491) (-2256.367) [-2247.368] * (-2238.650) (-2252.424) [-2239.485] (-2236.963) -- 0:08:32
Average standard deviation of split frequencies: 0.013865
346000 -- (-2260.558) [-2248.124] (-2249.705) (-2244.556) * (-2242.238) (-2253.687) (-2234.861) [-2233.534] -- 0:08:30
347000 -- (-2261.305) (-2241.147) (-2247.589) [-2238.997] * (-2242.125) (-2238.729) (-2260.757) [-2239.844] -- 0:08:29
348000 -- (-2251.564) [-2242.762] (-2253.077) (-2242.211) * (-2244.713) (-2249.029) (-2246.628) [-2234.453] -- 0:08:27
349000 -- (-2245.220) [-2236.636] (-2274.143) (-2248.121) * (-2246.719) (-2236.393) (-2242.799) [-2249.329] -- 0:08:27
350000 -- [-2238.896] (-2248.998) (-2249.242) (-2260.366) * (-2244.643) [-2230.316] (-2246.058) (-2252.815) -- 0:08:27
Average standard deviation of split frequencies: 0.013667
351000 -- [-2247.330] (-2242.485) (-2239.617) (-2234.290) * (-2244.961) [-2234.631] (-2231.445) (-2240.838) -- 0:08:24
352000 -- [-2236.290] (-2255.100) (-2245.840) (-2234.843) * (-2248.249) (-2231.973) [-2237.147] (-2246.235) -- 0:08:24
353000 -- (-2245.708) (-2247.280) [-2244.086] (-2245.707) * (-2247.107) (-2245.647) (-2250.868) [-2231.276] -- 0:08:22
354000 -- [-2236.477] (-2252.825) (-2246.138) (-2239.243) * (-2262.996) [-2229.352] (-2240.766) (-2236.762) -- 0:08:21
355000 -- (-2244.701) [-2236.568] (-2255.563) (-2244.105) * [-2226.358] (-2243.072) (-2247.405) (-2248.914) -- 0:08:19
Average standard deviation of split frequencies: 0.013182
356000 -- [-2240.028] (-2239.104) (-2251.869) (-2243.408) * (-2232.696) [-2234.357] (-2251.690) (-2251.877) -- 0:08:19
357000 -- (-2254.721) (-2254.117) (-2245.224) [-2245.220] * (-2229.059) (-2244.202) [-2246.446] (-2255.426) -- 0:08:18
358000 -- (-2242.226) (-2248.781) (-2258.954) [-2228.244] * (-2236.435) (-2243.193) [-2235.061] (-2243.516) -- 0:08:16
359000 -- [-2241.091] (-2257.779) (-2257.808) (-2242.156) * (-2236.088) (-2246.570) (-2258.969) [-2242.943] -- 0:08:16
360000 -- (-2243.871) [-2241.234] (-2258.306) (-2241.934) * [-2234.595] (-2253.757) (-2256.011) (-2254.829) -- 0:08:14
Average standard deviation of split frequencies: 0.012266
361000 -- [-2237.441] (-2243.028) (-2254.287) (-2235.322) * (-2247.579) (-2251.214) [-2243.078] (-2246.969) -- 0:08:13
362000 -- [-2233.223] (-2241.592) (-2267.393) (-2232.156) * (-2248.224) (-2262.733) (-2254.593) [-2250.641] -- 0:08:13
363000 -- (-2245.185) (-2272.306) (-2242.312) [-2237.294] * (-2248.933) (-2255.659) (-2241.747) [-2231.005] -- 0:08:11
364000 -- (-2251.278) (-2256.833) [-2243.954] (-2241.502) * (-2246.513) (-2237.322) [-2243.743] (-2261.489) -- 0:08:10
365000 -- [-2230.103] (-2274.837) (-2244.450) (-2253.648) * (-2258.635) (-2244.808) (-2259.308) [-2240.315] -- 0:08:08
Average standard deviation of split frequencies: 0.011996
366000 -- (-2238.590) (-2257.964) (-2240.905) [-2238.574] * (-2250.851) [-2234.736] (-2241.696) (-2237.150) -- 0:08:08
367000 -- [-2236.265] (-2251.540) (-2258.629) (-2245.406) * (-2247.243) [-2236.633] (-2249.530) (-2243.675) -- 0:08:06
368000 -- [-2237.071] (-2259.179) (-2244.888) (-2248.999) * (-2249.146) (-2244.517) (-2241.465) [-2235.717] -- 0:08:06
369000 -- [-2233.565] (-2263.648) (-2252.323) (-2246.032) * (-2248.315) (-2251.840) [-2244.593] (-2239.143) -- 0:08:05
370000 -- [-2247.467] (-2245.558) (-2249.401) (-2246.179) * (-2250.126) [-2235.258] (-2250.769) (-2250.816) -- 0:08:03
Average standard deviation of split frequencies: 0.011870
371000 -- (-2251.361) [-2246.755] (-2246.816) (-2248.784) * (-2252.924) [-2246.559] (-2257.129) (-2242.465) -- 0:08:03
372000 -- [-2240.331] (-2249.211) (-2250.007) (-2258.310) * (-2249.161) (-2244.257) [-2242.870] (-2250.325) -- 0:08:01
373000 -- (-2250.939) [-2247.665] (-2237.886) (-2254.795) * (-2247.304) (-2246.749) [-2237.129] (-2251.352) -- 0:08:00
374000 -- (-2242.804) (-2250.194) (-2243.991) [-2236.963] * (-2251.590) [-2244.498] (-2235.408) (-2266.768) -- 0:07:58
375000 -- (-2251.235) [-2242.245] (-2232.595) (-2242.078) * (-2255.262) [-2251.498] (-2235.165) (-2242.154) -- 0:07:58
Average standard deviation of split frequencies: 0.011505
376000 -- (-2247.259) (-2264.210) (-2232.502) [-2232.813] * (-2250.524) (-2246.731) (-2248.995) [-2231.461] -- 0:07:57
377000 -- [-2237.687] (-2241.364) (-2250.355) (-2239.801) * (-2245.177) [-2251.208] (-2243.921) (-2240.524) -- 0:07:57
378000 -- [-2239.822] (-2256.580) (-2233.080) (-2243.994) * (-2252.678) (-2240.864) (-2249.902) [-2229.912] -- 0:07:57
379000 -- (-2255.957) [-2245.953] (-2250.441) (-2248.581) * (-2247.439) (-2243.329) (-2256.728) [-2239.581] -- 0:07:56
380000 -- (-2244.336) (-2235.008) [-2237.781] (-2240.826) * (-2253.750) (-2244.664) (-2247.832) [-2238.230] -- 0:07:54
Average standard deviation of split frequencies: 0.011545
381000 -- (-2237.497) (-2252.547) [-2237.615] (-2231.989) * (-2253.279) (-2251.261) (-2237.679) [-2232.721] -- 0:07:54
382000 -- (-2234.599) (-2240.023) [-2230.263] (-2245.209) * (-2244.750) (-2252.765) (-2254.025) [-2244.096] -- 0:07:54
383000 -- (-2239.235) (-2252.364) [-2244.968] (-2233.067) * (-2236.968) (-2241.067) (-2246.522) [-2230.067] -- 0:07:53
384000 -- (-2249.040) (-2257.750) [-2234.276] (-2234.412) * [-2228.724] (-2259.663) (-2260.729) (-2235.411) -- 0:07:53
385000 -- (-2244.566) (-2248.928) (-2238.250) [-2240.758] * (-2238.843) (-2254.856) (-2267.151) [-2238.628] -- 0:07:52
Average standard deviation of split frequencies: 0.011082
386000 -- [-2237.334] (-2241.667) (-2240.198) (-2238.772) * [-2238.695] (-2243.801) (-2248.479) (-2243.733) -- 0:07:50
387000 -- (-2236.098) (-2238.291) [-2245.547] (-2250.852) * (-2243.213) [-2251.437] (-2258.771) (-2260.236) -- 0:07:50
388000 -- (-2239.321) [-2231.182] (-2247.337) (-2238.700) * (-2252.782) [-2240.453] (-2237.571) (-2243.692) -- 0:07:50
389000 -- (-2248.542) (-2255.773) [-2233.985] (-2254.161) * (-2256.006) (-2243.488) [-2243.409] (-2230.473) -- 0:07:49
390000 -- [-2246.219] (-2246.223) (-2244.365) (-2245.071) * (-2237.972) (-2258.857) [-2234.287] (-2236.122) -- 0:07:49
Average standard deviation of split frequencies: 0.010984
391000 -- [-2230.116] (-2254.179) (-2259.865) (-2242.627) * (-2258.699) (-2246.281) [-2242.712] (-2257.198) -- 0:07:48
392000 -- [-2243.033] (-2273.550) (-2230.718) (-2258.135) * (-2247.711) (-2247.777) (-2245.106) [-2233.276] -- 0:07:48
393000 -- (-2241.063) (-2239.587) [-2238.258] (-2245.932) * (-2240.981) (-2246.427) [-2240.410] (-2238.034) -- 0:07:46
394000 -- [-2248.165] (-2238.225) (-2243.874) (-2240.177) * (-2260.674) (-2251.449) (-2235.678) [-2239.319] -- 0:07:46
395000 -- (-2259.107) [-2235.898] (-2246.143) (-2234.286) * (-2245.666) (-2247.030) (-2244.972) [-2239.922] -- 0:07:45
Average standard deviation of split frequencies: 0.010486
396000 -- (-2241.199) (-2244.530) (-2258.426) [-2225.606] * (-2248.563) [-2235.485] (-2255.656) (-2241.528) -- 0:07:45
397000 -- (-2245.713) (-2237.688) [-2237.848] (-2239.792) * (-2255.746) [-2232.181] (-2253.095) (-2255.086) -- 0:07:44
398000 -- (-2244.174) (-2247.580) [-2236.061] (-2240.800) * (-2245.752) (-2238.510) [-2238.103] (-2249.601) -- 0:07:44
399000 -- (-2264.176) (-2234.464) [-2236.270] (-2244.411) * (-2246.561) (-2244.395) [-2243.915] (-2236.537) -- 0:07:43
400000 -- (-2249.665) [-2244.645] (-2230.884) (-2244.675) * (-2239.721) (-2237.196) [-2235.818] (-2250.297) -- 0:07:42
Average standard deviation of split frequencies: 0.010535
401000 -- (-2256.256) (-2248.837) [-2244.248] (-2245.222) * (-2238.762) (-2248.141) (-2250.140) [-2241.103] -- 0:07:41
402000 -- (-2249.660) (-2235.541) (-2265.028) [-2233.575] * (-2236.106) (-2247.835) (-2237.027) [-2235.073] -- 0:07:41
403000 -- (-2257.510) (-2234.297) (-2260.342) [-2238.442] * (-2245.508) (-2246.006) [-2233.125] (-2234.764) -- 0:07:39
404000 -- (-2248.661) (-2246.021) [-2242.044] (-2241.834) * (-2252.782) (-2244.033) (-2255.014) [-2239.264] -- 0:07:38
405000 -- (-2254.134) [-2244.809] (-2249.959) (-2241.090) * [-2239.543] (-2249.534) (-2245.701) (-2256.275) -- 0:07:38
Average standard deviation of split frequencies: 0.010177
406000 -- (-2246.951) (-2240.470) (-2250.416) [-2240.070] * (-2250.627) (-2239.542) [-2237.524] (-2247.835) -- 0:07:37
407000 -- [-2236.101] (-2244.979) (-2242.822) (-2246.144) * (-2264.015) (-2244.273) [-2238.835] (-2243.240) -- 0:07:37
408000 -- (-2246.476) (-2256.209) (-2238.343) [-2235.760] * (-2241.889) (-2243.783) [-2235.578] (-2254.257) -- 0:07:35
409000 -- (-2238.250) (-2247.832) (-2250.642) [-2242.284] * (-2258.354) (-2241.610) (-2241.891) [-2238.352] -- 0:07:35
410000 -- (-2241.110) [-2238.338] (-2245.669) (-2248.950) * (-2249.481) (-2247.180) (-2241.189) [-2236.922] -- 0:07:34
Average standard deviation of split frequencies: 0.009943
411000 -- (-2247.937) (-2258.000) (-2233.131) [-2241.820] * (-2252.469) (-2243.026) (-2247.763) [-2236.340] -- 0:07:34
412000 -- (-2244.576) (-2261.735) [-2238.417] (-2251.049) * (-2265.850) (-2238.213) (-2234.822) [-2227.578] -- 0:07:33
413000 -- [-2227.015] (-2248.616) (-2235.206) (-2268.357) * [-2243.347] (-2232.814) (-2233.463) (-2255.668) -- 0:07:31
414000 -- (-2238.776) [-2236.360] (-2247.206) (-2257.524) * (-2256.254) (-2241.951) (-2241.634) [-2236.460] -- 0:07:31
415000 -- (-2239.135) (-2240.561) [-2245.253] (-2252.592) * (-2247.520) (-2240.649) [-2234.660] (-2240.998) -- 0:07:31
Average standard deviation of split frequencies: 0.010013
416000 -- (-2252.492) (-2240.417) [-2233.449] (-2247.397) * (-2244.371) (-2242.663) [-2240.084] (-2243.807) -- 0:07:30
417000 -- (-2249.705) (-2252.895) (-2255.127) [-2233.756] * (-2244.055) (-2251.741) [-2237.101] (-2236.727) -- 0:07:30
418000 -- (-2247.777) (-2247.486) (-2242.074) [-2236.853] * (-2248.781) (-2238.419) [-2240.926] (-2239.343) -- 0:07:29
419000 -- [-2227.646] (-2248.572) (-2232.538) (-2256.368) * (-2240.005) (-2239.277) (-2249.387) [-2238.351] -- 0:07:29
420000 -- [-2237.549] (-2249.751) (-2255.775) (-2239.892) * (-2252.788) [-2249.767] (-2251.900) (-2237.334) -- 0:07:27
Average standard deviation of split frequencies: 0.010706
421000 -- (-2241.533) (-2251.407) (-2239.935) [-2231.377] * (-2252.153) (-2246.582) (-2253.564) [-2235.630] -- 0:07:26
422000 -- (-2242.632) (-2253.541) (-2237.229) [-2233.612] * (-2251.902) [-2235.190] (-2241.753) (-2245.892) -- 0:07:25
423000 -- (-2251.675) (-2244.777) [-2242.959] (-2231.364) * (-2244.623) (-2234.764) (-2248.713) [-2240.557] -- 0:07:24
424000 -- (-2243.119) (-2236.732) (-2253.725) [-2236.567] * (-2249.246) [-2230.671] (-2253.905) (-2245.949) -- 0:07:24
425000 -- (-2235.103) (-2250.814) [-2242.242] (-2250.354) * [-2235.999] (-2228.810) (-2247.619) (-2257.067) -- 0:07:22
Average standard deviation of split frequencies: 0.010415
426000 -- (-2254.927) [-2244.013] (-2235.357) (-2259.925) * [-2237.420] (-2240.716) (-2257.722) (-2257.585) -- 0:07:21
427000 -- (-2246.548) (-2238.347) [-2233.351] (-2257.780) * (-2240.089) [-2245.129] (-2237.731) (-2260.502) -- 0:07:20
428000 -- (-2244.375) (-2251.632) [-2237.101] (-2251.125) * (-2245.498) [-2241.279] (-2251.578) (-2256.493) -- 0:07:19
429000 -- (-2244.726) (-2253.310) [-2231.874] (-2255.481) * (-2242.990) [-2235.587] (-2250.087) (-2254.864) -- 0:07:17
430000 -- (-2260.759) (-2244.103) [-2240.045] (-2241.987) * (-2248.756) [-2243.859] (-2248.192) (-2237.205) -- 0:07:17
Average standard deviation of split frequencies: 0.010624
431000 -- (-2241.745) [-2234.767] (-2252.137) (-2231.418) * (-2250.417) [-2230.331] (-2251.408) (-2246.509) -- 0:07:16
432000 -- (-2242.823) (-2244.717) [-2251.554] (-2240.073) * (-2243.586) (-2241.293) (-2240.979) [-2236.820] -- 0:07:16
433000 -- [-2249.358] (-2249.527) (-2259.911) (-2261.856) * (-2242.787) (-2240.533) (-2262.979) [-2235.408] -- 0:07:16
434000 -- [-2240.778] (-2258.253) (-2240.884) (-2252.194) * (-2238.897) (-2244.230) (-2255.219) [-2236.061] -- 0:07:14
435000 -- (-2237.886) [-2238.412] (-2248.736) (-2243.834) * (-2245.631) (-2254.309) (-2240.994) [-2240.861] -- 0:07:13
Average standard deviation of split frequencies: 0.010844
436000 -- (-2230.518) [-2234.427] (-2247.811) (-2240.410) * (-2242.927) (-2243.902) (-2249.673) [-2246.904] -- 0:07:13
437000 -- (-2242.019) [-2226.250] (-2264.625) (-2242.304) * (-2244.121) (-2243.799) (-2248.452) [-2247.612] -- 0:07:12
438000 -- (-2233.309) [-2235.226] (-2251.390) (-2246.380) * (-2253.235) [-2238.805] (-2244.781) (-2239.793) -- 0:07:12
439000 -- [-2230.951] (-2231.848) (-2248.319) (-2248.104) * (-2243.120) (-2237.572) (-2242.678) [-2241.290] -- 0:07:11
440000 -- [-2236.897] (-2248.225) (-2254.946) (-2235.013) * (-2247.112) (-2247.677) [-2245.178] (-2235.220) -- 0:07:10
Average standard deviation of split frequencies: 0.010500
441000 -- (-2252.106) (-2247.776) [-2249.258] (-2235.340) * (-2242.823) [-2230.021] (-2246.974) (-2243.525) -- 0:07:09
442000 -- [-2247.519] (-2239.401) (-2251.412) (-2237.120) * (-2242.169) (-2255.809) (-2237.133) [-2229.480] -- 0:07:09
443000 -- [-2237.481] (-2239.827) (-2260.350) (-2248.380) * (-2242.038) (-2260.422) (-2240.014) [-2240.312] -- 0:07:07
444000 -- (-2268.139) (-2259.397) (-2251.272) [-2234.929] * [-2237.268] (-2253.076) (-2247.193) (-2239.321) -- 0:07:07
445000 -- [-2244.045] (-2240.502) (-2255.654) (-2248.298) * (-2239.562) (-2249.252) (-2247.095) [-2236.807] -- 0:07:06
Average standard deviation of split frequencies: 0.010238
446000 -- [-2248.243] (-2245.746) (-2244.256) (-2248.563) * [-2233.434] (-2245.981) (-2245.755) (-2242.698) -- 0:07:04
447000 -- [-2243.990] (-2247.845) (-2259.715) (-2252.645) * (-2250.495) [-2244.217] (-2244.177) (-2244.074) -- 0:07:04
448000 -- (-2254.350) (-2256.926) [-2241.119] (-2258.125) * (-2259.676) (-2247.164) (-2248.466) [-2237.494] -- 0:07:03
449000 -- (-2255.704) (-2248.726) [-2236.774] (-2250.922) * (-2255.802) (-2233.748) (-2235.861) [-2240.324] -- 0:07:03
450000 -- (-2244.051) (-2246.781) [-2231.693] (-2259.541) * (-2253.001) (-2233.364) [-2243.373] (-2265.821) -- 0:07:02
Average standard deviation of split frequencies: 0.010444
451000 -- (-2244.074) (-2246.315) [-2238.767] (-2263.452) * (-2260.924) (-2248.796) (-2242.492) [-2239.003] -- 0:07:02
452000 -- [-2235.454] (-2246.489) (-2236.816) (-2259.219) * (-2240.703) (-2249.356) [-2237.672] (-2242.923) -- 0:07:01
453000 -- [-2233.552] (-2250.990) (-2240.852) (-2256.261) * [-2253.662] (-2243.119) (-2246.274) (-2243.173) -- 0:07:00
454000 -- (-2233.883) (-2263.118) [-2234.232] (-2256.814) * (-2244.957) [-2234.248] (-2245.490) (-2247.856) -- 0:06:59
455000 -- (-2241.467) [-2247.201] (-2245.765) (-2244.398) * (-2243.832) [-2242.171] (-2240.640) (-2241.742) -- 0:06:59
Average standard deviation of split frequencies: 0.010667
456000 -- (-2243.038) (-2239.319) [-2235.669] (-2247.554) * (-2241.274) (-2258.769) [-2245.908] (-2240.230) -- 0:06:58
457000 -- (-2233.858) [-2235.122] (-2254.563) (-2248.250) * [-2236.520] (-2239.774) (-2249.543) (-2228.668) -- 0:06:58
458000 -- (-2246.361) (-2244.819) [-2235.718] (-2253.421) * (-2248.721) (-2252.431) (-2235.132) [-2239.030] -- 0:06:56
459000 -- (-2247.252) [-2240.564] (-2251.533) (-2256.842) * (-2251.881) (-2240.662) (-2248.003) [-2232.353] -- 0:06:56
460000 -- [-2231.326] (-2254.976) (-2246.761) (-2246.856) * (-2274.350) (-2236.103) [-2248.660] (-2239.791) -- 0:06:55
Average standard deviation of split frequencies: 0.010543
461000 -- [-2235.795] (-2266.665) (-2249.390) (-2243.883) * (-2252.191) [-2236.826] (-2237.836) (-2246.127) -- 0:06:53
462000 -- [-2239.113] (-2255.356) (-2237.563) (-2241.564) * (-2235.192) [-2239.597] (-2255.717) (-2248.168) -- 0:06:53
463000 -- (-2238.740) (-2245.405) (-2238.719) [-2245.735] * (-2244.233) [-2237.271] (-2243.996) (-2235.561) -- 0:06:52
464000 -- (-2249.662) [-2239.804] (-2245.496) (-2238.381) * (-2245.913) (-2251.984) [-2241.553] (-2253.667) -- 0:06:52
465000 -- (-2240.351) [-2230.489] (-2254.002) (-2234.495) * [-2239.852] (-2249.994) (-2242.482) (-2246.471) -- 0:06:51
Average standard deviation of split frequencies: 0.010056
466000 -- (-2252.221) (-2245.713) [-2231.500] (-2245.421) * [-2236.386] (-2254.936) (-2256.706) (-2242.553) -- 0:06:51
467000 -- (-2250.941) [-2240.884] (-2228.978) (-2260.883) * (-2246.766) (-2250.944) [-2242.603] (-2258.943) -- 0:06:50
468000 -- [-2251.851] (-2241.499) (-2237.720) (-2249.479) * [-2243.706] (-2246.829) (-2241.317) (-2261.473) -- 0:06:49
469000 -- (-2247.331) (-2243.028) (-2231.619) [-2242.581] * [-2242.695] (-2236.345) (-2257.747) (-2256.854) -- 0:06:48
470000 -- (-2248.737) (-2254.083) (-2238.922) [-2234.560] * (-2243.854) (-2236.046) (-2251.101) [-2238.533] -- 0:06:48
Average standard deviation of split frequencies: 0.009803
471000 -- [-2245.794] (-2249.532) (-2255.777) (-2243.983) * [-2239.919] (-2240.911) (-2242.170) (-2248.067) -- 0:06:47
472000 -- (-2250.569) (-2256.422) [-2246.385] (-2243.381) * (-2258.106) (-2239.312) [-2242.632] (-2230.328) -- 0:06:47
473000 -- (-2250.044) [-2251.505] (-2252.251) (-2259.945) * (-2259.993) (-2245.718) (-2236.373) [-2241.655] -- 0:06:46
474000 -- (-2240.242) [-2244.601] (-2269.177) (-2237.228) * (-2233.287) (-2244.436) (-2238.021) [-2239.939] -- 0:06:45
475000 -- [-2244.430] (-2253.445) (-2251.635) (-2253.396) * (-2250.462) (-2240.936) (-2240.874) [-2240.846] -- 0:06:44
Average standard deviation of split frequencies: 0.009558
476000 -- [-2250.008] (-2244.113) (-2247.755) (-2240.821) * [-2247.020] (-2252.369) (-2242.593) (-2243.559) -- 0:06:44
477000 -- [-2254.162] (-2264.072) (-2252.930) (-2232.398) * (-2232.458) (-2253.421) (-2235.797) [-2233.440] -- 0:06:43
478000 -- [-2236.709] (-2258.819) (-2253.819) (-2240.429) * (-2239.937) (-2260.449) [-2235.625] (-2238.420) -- 0:06:42
479000 -- (-2244.908) (-2261.787) (-2253.372) [-2240.729] * (-2243.034) (-2254.811) [-2235.875] (-2236.031) -- 0:06:42
480000 -- (-2267.214) [-2250.390] (-2243.202) (-2235.269) * [-2247.678] (-2247.623) (-2240.781) (-2258.103) -- 0:06:41
Average standard deviation of split frequencies: 0.009340
481000 -- (-2232.952) [-2236.922] (-2255.564) (-2251.325) * [-2235.210] (-2255.630) (-2245.855) (-2241.798) -- 0:06:41
482000 -- [-2238.285] (-2248.613) (-2243.039) (-2248.822) * (-2246.089) (-2250.129) [-2242.081] (-2258.062) -- 0:06:39
483000 -- (-2240.888) (-2237.819) [-2234.385] (-2262.686) * (-2249.528) (-2255.180) [-2231.656] (-2250.333) -- 0:06:39
484000 -- (-2252.975) (-2228.773) (-2242.836) [-2253.679] * (-2240.398) [-2237.127] (-2246.017) (-2248.121) -- 0:06:38
485000 -- (-2243.027) [-2243.280] (-2251.342) (-2252.620) * (-2246.223) [-2232.354] (-2244.649) (-2242.952) -- 0:06:38
Average standard deviation of split frequencies: 0.009342
486000 -- (-2251.014) (-2245.025) [-2245.060] (-2242.034) * (-2256.417) [-2244.401] (-2256.248) (-2235.453) -- 0:06:36
487000 -- (-2257.463) (-2246.776) (-2238.386) [-2244.715] * (-2243.545) [-2231.668] (-2238.927) (-2242.512) -- 0:06:36
488000 -- (-2253.611) (-2245.071) (-2255.795) [-2233.643] * (-2247.301) [-2244.824] (-2232.722) (-2235.989) -- 0:06:35
489000 -- (-2249.440) (-2264.557) (-2250.112) [-2237.849] * (-2249.131) [-2231.097] (-2249.018) (-2234.824) -- 0:06:33
490000 -- (-2241.365) [-2235.686] (-2261.878) (-2244.200) * (-2241.067) (-2238.446) [-2234.857] (-2248.215) -- 0:06:33
Average standard deviation of split frequencies: 0.009312
491000 -- (-2256.232) (-2254.385) (-2253.265) [-2242.438] * (-2251.897) (-2246.173) [-2240.359] (-2255.345) -- 0:06:31
492000 -- (-2263.606) (-2244.309) [-2233.123] (-2240.453) * (-2249.011) (-2248.659) (-2239.759) [-2232.617] -- 0:06:31
493000 -- (-2250.284) (-2239.969) (-2234.019) [-2246.433] * (-2264.809) [-2242.876] (-2244.879) (-2239.413) -- 0:06:29
494000 -- (-2255.743) [-2232.035] (-2240.178) (-2245.564) * [-2248.345] (-2244.421) (-2262.913) (-2256.998) -- 0:06:29
495000 -- (-2242.064) (-2236.553) [-2246.130] (-2246.132) * (-2255.312) (-2249.226) [-2232.873] (-2244.023) -- 0:06:28
Average standard deviation of split frequencies: 0.009029
496000 -- (-2254.957) [-2245.842] (-2240.588) (-2243.486) * (-2250.748) (-2251.977) [-2242.429] (-2236.788) -- 0:06:27
497000 -- (-2242.130) [-2236.815] (-2242.301) (-2253.260) * (-2244.865) (-2250.343) [-2241.005] (-2241.588) -- 0:06:26
498000 -- (-2266.515) (-2251.985) (-2243.461) [-2242.795] * (-2250.604) (-2251.369) (-2235.759) [-2250.956] -- 0:06:25
499000 -- (-2252.245) (-2246.310) [-2246.974] (-2240.973) * (-2243.885) (-2237.441) [-2244.223] (-2255.650) -- 0:06:24
500000 -- (-2231.189) (-2245.144) [-2240.796] (-2234.872) * (-2240.951) (-2251.398) [-2240.433] (-2256.156) -- 0:06:24
Average standard deviation of split frequencies: 0.008812
501000 -- (-2251.054) (-2233.439) [-2246.352] (-2230.192) * [-2233.372] (-2260.980) (-2243.945) (-2251.077) -- 0:06:23
502000 -- (-2240.082) (-2245.900) (-2248.221) [-2238.820] * (-2238.360) (-2256.861) (-2253.330) [-2244.377] -- 0:06:22
503000 -- (-2252.829) (-2240.936) (-2238.197) [-2235.477] * [-2236.000] (-2241.612) (-2253.069) (-2247.527) -- 0:06:22
504000 -- (-2240.729) [-2245.466] (-2264.687) (-2237.616) * [-2237.788] (-2259.625) (-2249.991) (-2241.380) -- 0:06:20
505000 -- (-2248.569) [-2240.071] (-2244.333) (-2239.181) * [-2232.670] (-2241.307) (-2248.656) (-2238.268) -- 0:06:20
Average standard deviation of split frequencies: 0.008815
506000 -- (-2257.056) (-2251.871) [-2237.463] (-2243.085) * [-2239.495] (-2235.170) (-2256.798) (-2239.772) -- 0:06:19
507000 -- (-2249.691) (-2232.952) [-2235.574] (-2235.105) * (-2241.990) [-2236.138] (-2244.182) (-2258.582) -- 0:06:19
508000 -- (-2227.529) [-2244.258] (-2238.579) (-2248.872) * (-2252.533) [-2241.694] (-2244.563) (-2245.270) -- 0:06:18
509000 -- [-2229.924] (-2238.807) (-2250.155) (-2246.055) * (-2252.020) (-2248.326) [-2226.563] (-2248.801) -- 0:06:18
510000 -- [-2242.818] (-2254.193) (-2249.031) (-2261.342) * (-2247.113) (-2239.497) [-2242.772] (-2249.394) -- 0:06:16
Average standard deviation of split frequencies: 0.008784
511000 -- [-2234.640] (-2243.916) (-2257.157) (-2248.961) * [-2235.773] (-2243.176) (-2234.807) (-2236.567) -- 0:06:16
512000 -- [-2241.104] (-2242.567) (-2259.187) (-2239.542) * (-2240.660) (-2240.812) [-2241.130] (-2248.441) -- 0:06:15
513000 -- [-2238.601] (-2258.839) (-2245.307) (-2256.972) * (-2260.733) [-2241.990] (-2233.499) (-2257.855) -- 0:06:14
514000 -- (-2248.750) (-2255.150) [-2235.417] (-2263.316) * (-2257.594) (-2242.650) [-2230.925] (-2256.284) -- 0:06:14
515000 -- (-2243.852) (-2253.432) (-2246.250) [-2244.269] * [-2239.360] (-2239.866) (-2247.755) (-2241.428) -- 0:06:13
Average standard deviation of split frequencies: 0.008443
516000 -- (-2240.250) (-2261.426) (-2240.226) [-2235.238] * (-2235.342) (-2248.343) [-2243.659] (-2246.429) -- 0:06:13
517000 -- (-2239.117) (-2247.465) [-2229.688] (-2245.120) * [-2244.216] (-2251.158) (-2246.932) (-2237.726) -- 0:06:12
518000 -- [-2242.463] (-2253.642) (-2247.980) (-2233.915) * [-2243.153] (-2239.848) (-2265.096) (-2241.051) -- 0:06:11
519000 -- (-2246.888) (-2237.808) (-2253.630) [-2236.272] * (-2236.241) (-2239.522) (-2252.870) [-2250.253] -- 0:06:10
520000 -- (-2248.716) (-2229.887) (-2266.554) [-2241.470] * (-2239.304) [-2235.359] (-2250.798) (-2246.472) -- 0:06:10
Average standard deviation of split frequencies: 0.008601
521000 -- (-2245.985) (-2246.744) (-2258.108) [-2234.919] * (-2243.637) [-2236.510] (-2239.524) (-2249.580) -- 0:06:09
522000 -- (-2254.608) (-2246.067) [-2234.023] (-2229.577) * [-2243.854] (-2237.113) (-2255.354) (-2249.658) -- 0:06:09
523000 -- [-2246.327] (-2244.185) (-2243.958) (-2232.049) * (-2246.846) [-2229.444] (-2262.431) (-2245.479) -- 0:06:08
524000 -- (-2247.684) (-2259.118) (-2236.387) [-2236.331] * (-2239.141) (-2246.318) (-2246.788) [-2237.199] -- 0:06:06
525000 -- (-2248.302) (-2244.324) (-2264.334) [-2244.033] * (-2253.338) [-2241.515] (-2257.960) (-2237.645) -- 0:06:06
Average standard deviation of split frequencies: 0.008766
526000 -- (-2251.193) (-2248.321) (-2239.723) [-2236.714] * (-2243.018) (-2236.218) (-2251.139) [-2236.632] -- 0:06:05
527000 -- (-2255.594) (-2253.782) [-2243.035] (-2242.170) * [-2235.430] (-2243.991) (-2281.320) (-2234.757) -- 0:06:05
528000 -- (-2246.821) (-2240.039) [-2236.605] (-2253.265) * (-2262.622) [-2238.722] (-2267.705) (-2239.613) -- 0:06:04
529000 -- [-2244.966] (-2248.637) (-2243.385) (-2251.862) * (-2261.593) [-2232.867] (-2246.781) (-2247.348) -- 0:06:04
530000 -- [-2236.820] (-2245.810) (-2249.724) (-2252.938) * (-2255.994) (-2237.785) [-2242.111] (-2251.803) -- 0:06:03
Average standard deviation of split frequencies: 0.008505
531000 -- (-2249.005) [-2239.766] (-2244.422) (-2249.175) * (-2249.828) (-2230.849) (-2236.698) [-2238.585] -- 0:06:02
532000 -- [-2239.589] (-2247.191) (-2255.450) (-2241.840) * (-2239.390) [-2232.309] (-2247.163) (-2228.877) -- 0:06:01
533000 -- [-2252.873] (-2238.161) (-2259.089) (-2242.311) * [-2241.300] (-2256.806) (-2238.740) (-2250.922) -- 0:06:00
534000 -- [-2237.072] (-2247.084) (-2240.437) (-2239.630) * [-2244.033] (-2241.882) (-2254.309) (-2246.024) -- 0:06:00
535000 -- (-2254.781) (-2244.007) (-2233.804) [-2240.635] * [-2240.980] (-2239.920) (-2246.259) (-2243.671) -- 0:05:59
Average standard deviation of split frequencies: 0.008013
536000 -- [-2234.312] (-2248.770) (-2238.098) (-2249.256) * [-2237.950] (-2252.843) (-2248.026) (-2245.931) -- 0:05:59
537000 -- (-2244.937) (-2251.815) (-2230.314) [-2228.804] * [-2240.459] (-2241.583) (-2251.894) (-2265.562) -- 0:05:57
538000 -- (-2236.964) (-2239.209) [-2229.616] (-2235.897) * (-2232.445) (-2240.540) (-2264.561) [-2241.311] -- 0:05:57
539000 -- (-2254.617) [-2236.948] (-2248.084) (-2242.781) * (-2248.323) [-2227.813] (-2237.853) (-2258.285) -- 0:05:56
540000 -- (-2261.026) [-2239.879] (-2256.937) (-2238.158) * (-2242.791) (-2235.444) [-2241.932] (-2248.994) -- 0:05:56
Average standard deviation of split frequencies: 0.008339
541000 -- [-2237.367] (-2246.509) (-2244.702) (-2238.219) * [-2245.816] (-2247.172) (-2238.249) (-2258.457) -- 0:05:55
542000 -- [-2243.959] (-2254.017) (-2243.548) (-2242.418) * [-2242.518] (-2234.608) (-2231.971) (-2254.049) -- 0:05:54
543000 -- (-2250.135) (-2249.333) (-2252.883) [-2230.254] * (-2252.286) (-2253.261) [-2226.277] (-2254.556) -- 0:05:54
544000 -- [-2237.213] (-2244.276) (-2244.985) (-2247.888) * (-2248.914) (-2253.755) (-2234.342) [-2235.160] -- 0:05:52
545000 -- (-2249.642) [-2243.025] (-2252.323) (-2249.988) * (-2247.994) (-2250.327) (-2241.651) [-2240.177] -- 0:05:52
Average standard deviation of split frequencies: 0.008381
546000 -- (-2247.066) (-2248.964) (-2238.719) [-2239.124] * (-2240.971) (-2251.147) (-2242.931) [-2240.689] -- 0:05:51
547000 -- (-2257.545) (-2238.453) (-2254.003) [-2250.836] * (-2265.756) (-2237.680) (-2244.424) [-2238.778] -- 0:05:51
548000 -- [-2241.270] (-2241.436) (-2248.345) (-2240.523) * [-2240.204] (-2251.734) (-2249.429) (-2231.478) -- 0:05:50
549000 -- (-2242.840) (-2239.653) (-2260.968) [-2246.144] * (-2253.423) (-2230.033) [-2244.428] (-2242.415) -- 0:05:49
550000 -- (-2253.319) (-2239.515) (-2246.305) [-2233.242] * (-2244.656) (-2258.148) [-2237.852] (-2243.290) -- 0:05:48
Average standard deviation of split frequencies: 0.008534
551000 -- (-2248.190) (-2239.201) (-2253.403) [-2234.608] * (-2247.736) (-2254.999) (-2245.026) [-2231.782] -- 0:05:47
552000 -- (-2253.381) (-2240.719) [-2239.220] (-2234.988) * (-2241.186) (-2247.363) (-2245.345) [-2229.615] -- 0:05:47
553000 -- [-2238.676] (-2235.936) (-2271.812) (-2240.438) * [-2235.267] (-2246.954) (-2246.720) (-2233.008) -- 0:05:46
554000 -- [-2233.168] (-2269.996) (-2249.591) (-2242.816) * (-2243.917) (-2250.144) (-2245.087) [-2238.007] -- 0:05:46
555000 -- (-2238.452) [-2254.410] (-2270.612) (-2243.503) * (-2238.948) [-2230.935] (-2261.575) (-2237.748) -- 0:05:45
Average standard deviation of split frequencies: 0.008757
556000 -- (-2246.011) (-2239.908) [-2240.433] (-2245.747) * (-2246.751) (-2240.297) (-2245.739) [-2237.812] -- 0:05:44
557000 -- [-2233.116] (-2251.642) (-2237.012) (-2242.315) * [-2241.078] (-2244.995) (-2247.178) (-2235.875) -- 0:05:43
558000 -- [-2227.314] (-2260.162) (-2253.335) (-2240.720) * (-2237.577) (-2249.584) (-2248.977) [-2239.837] -- 0:05:42
559000 -- [-2243.627] (-2253.414) (-2239.188) (-2255.433) * (-2239.082) (-2242.226) (-2261.425) [-2234.090] -- 0:05:42
560000 -- (-2260.694) (-2259.370) [-2247.272] (-2230.640) * [-2256.873] (-2254.308) (-2246.433) (-2248.896) -- 0:05:41
Average standard deviation of split frequencies: 0.008381
561000 -- (-2249.452) (-2258.062) (-2242.017) [-2238.466] * (-2251.005) (-2234.597) [-2236.056] (-2256.390) -- 0:05:41
562000 -- [-2246.200] (-2251.178) (-2254.417) (-2245.062) * (-2254.908) (-2248.343) (-2236.676) [-2234.653] -- 0:05:40
563000 -- (-2259.853) (-2243.940) (-2254.438) [-2230.796] * (-2252.428) (-2249.076) (-2255.559) [-2238.648] -- 0:05:39
564000 -- (-2239.837) (-2243.093) (-2241.351) [-2241.858] * (-2239.701) [-2239.444] (-2247.272) (-2242.946) -- 0:05:39
565000 -- [-2234.943] (-2243.159) (-2250.496) (-2250.485) * (-2242.425) (-2242.214) (-2250.053) [-2240.778] -- 0:05:37
Average standard deviation of split frequencies: 0.008459
566000 -- (-2234.534) [-2242.821] (-2255.451) (-2254.384) * (-2243.884) [-2236.474] (-2247.015) (-2254.497) -- 0:05:37
567000 -- (-2253.038) (-2239.211) (-2243.335) [-2237.383] * [-2242.324] (-2235.155) (-2255.131) (-2245.654) -- 0:05:36
568000 -- (-2246.446) [-2235.916] (-2244.062) (-2265.512) * (-2240.765) [-2247.577] (-2241.960) (-2270.985) -- 0:05:36
569000 -- [-2238.303] (-2243.660) (-2244.202) (-2251.497) * [-2240.047] (-2254.181) (-2261.261) (-2257.293) -- 0:05:35
570000 -- [-2242.341] (-2249.751) (-2240.653) (-2254.477) * (-2233.471) (-2255.032) [-2245.133] (-2252.170) -- 0:05:34
Average standard deviation of split frequencies: 0.008854
571000 -- [-2246.022] (-2243.756) (-2239.133) (-2252.703) * (-2244.064) (-2241.615) [-2248.792] (-2250.308) -- 0:05:34
572000 -- [-2240.455] (-2245.506) (-2247.133) (-2240.769) * (-2236.508) (-2248.463) [-2240.951] (-2254.348) -- 0:05:33
573000 -- [-2244.830] (-2246.369) (-2230.926) (-2253.545) * (-2265.016) (-2247.748) [-2242.660] (-2251.735) -- 0:05:32
574000 -- (-2237.186) (-2240.367) [-2234.415] (-2268.307) * (-2259.213) (-2243.319) [-2236.279] (-2245.299) -- 0:05:31
575000 -- (-2250.875) (-2244.012) [-2241.869] (-2244.681) * (-2238.817) (-2254.688) [-2240.632] (-2249.209) -- 0:05:31
Average standard deviation of split frequencies: 0.008847
576000 -- (-2242.362) (-2254.222) (-2262.504) [-2240.573] * (-2254.203) (-2235.243) [-2244.125] (-2257.513) -- 0:05:30
577000 -- (-2231.870) [-2237.774] (-2253.514) (-2249.234) * (-2242.193) [-2238.301] (-2255.300) (-2247.053) -- 0:05:29
578000 -- (-2241.475) (-2241.504) (-2245.596) [-2232.027] * (-2247.259) (-2245.815) [-2238.909] (-2259.283) -- 0:05:28
579000 -- (-2246.788) (-2248.203) (-2246.280) [-2239.390] * (-2275.729) [-2240.158] (-2242.133) (-2255.976) -- 0:05:27
580000 -- (-2244.296) (-2240.106) (-2235.425) [-2242.787] * (-2262.446) [-2245.291] (-2236.047) (-2262.963) -- 0:05:27
Average standard deviation of split frequencies: 0.008590
581000 -- (-2262.178) (-2245.758) (-2248.568) [-2241.181] * (-2259.029) (-2245.455) (-2238.916) [-2242.709] -- 0:05:25
582000 -- (-2252.962) (-2253.333) (-2239.720) [-2234.241] * (-2257.816) (-2242.990) [-2249.127] (-2255.857) -- 0:05:25
583000 -- [-2258.196] (-2246.247) (-2242.281) (-2253.826) * (-2263.304) (-2234.572) [-2237.361] (-2242.852) -- 0:05:24
584000 -- (-2249.842) (-2237.826) (-2248.917) [-2240.477] * (-2241.878) [-2241.860] (-2246.981) (-2261.304) -- 0:05:23
585000 -- (-2244.917) (-2260.053) [-2248.037] (-2262.898) * (-2258.635) (-2236.879) [-2245.252] (-2248.579) -- 0:05:22
Average standard deviation of split frequencies: 0.008249
586000 -- (-2244.343) [-2245.216] (-2234.841) (-2246.724) * (-2238.788) [-2233.392] (-2251.370) (-2247.521) -- 0:05:21
587000 -- (-2258.484) (-2246.902) [-2238.549] (-2243.366) * (-2241.959) (-2239.231) [-2234.027] (-2241.605) -- 0:05:20
588000 -- (-2251.431) [-2242.449] (-2245.543) (-2245.040) * (-2253.567) (-2242.450) [-2227.495] (-2236.164) -- 0:05:20
589000 -- (-2247.857) (-2254.538) [-2237.705] (-2254.914) * (-2238.473) (-2247.840) [-2239.232] (-2241.538) -- 0:05:19
590000 -- (-2249.116) [-2241.906] (-2245.095) (-2245.373) * (-2243.318) [-2234.661] (-2241.769) (-2257.945) -- 0:05:18
Average standard deviation of split frequencies: 0.008006
591000 -- (-2258.679) (-2235.900) (-2238.308) [-2232.656] * (-2242.612) [-2236.576] (-2248.499) (-2243.389) -- 0:05:17
592000 -- [-2238.811] (-2245.062) (-2231.153) (-2255.501) * (-2244.946) (-2242.483) (-2260.795) [-2244.977] -- 0:05:17
593000 -- (-2245.279) (-2237.440) [-2237.982] (-2279.847) * (-2245.612) [-2241.981] (-2275.420) (-2237.389) -- 0:05:16
594000 -- (-2247.511) (-2251.650) [-2241.343] (-2263.272) * (-2238.916) [-2238.497] (-2263.747) (-2235.992) -- 0:05:15
595000 -- [-2241.376] (-2257.137) (-2237.982) (-2245.677) * (-2235.647) [-2249.585] (-2268.383) (-2228.880) -- 0:05:15
Average standard deviation of split frequencies: 0.007947
596000 -- (-2246.436) [-2241.804] (-2241.129) (-2250.577) * (-2244.403) (-2257.292) (-2280.009) [-2234.267] -- 0:05:14
597000 -- (-2247.063) (-2260.487) [-2236.403] (-2248.118) * (-2248.344) (-2235.524) (-2247.412) [-2241.196] -- 0:05:13
598000 -- [-2240.075] (-2248.811) (-2244.131) (-2244.246) * (-2261.744) [-2236.992] (-2260.124) (-2245.336) -- 0:05:13
599000 -- (-2247.173) (-2244.416) [-2255.602] (-2236.686) * (-2252.104) [-2240.343] (-2262.405) (-2234.401) -- 0:05:11
600000 -- (-2245.788) (-2247.223) (-2255.222) [-2249.630] * (-2247.317) [-2239.109] (-2259.511) (-2224.694) -- 0:05:11
Average standard deviation of split frequencies: 0.007910
601000 -- (-2256.169) (-2240.180) [-2247.504] (-2258.703) * [-2240.131] (-2248.172) (-2247.059) (-2266.567) -- 0:05:10
602000 -- (-2243.001) [-2233.224] (-2251.964) (-2258.390) * (-2251.326) (-2252.106) [-2243.056] (-2237.666) -- 0:05:10
603000 -- (-2233.036) [-2236.143] (-2242.270) (-2256.068) * (-2245.935) (-2249.381) [-2240.621] (-2264.110) -- 0:05:09
604000 -- [-2236.425] (-2241.111) (-2243.760) (-2255.701) * (-2258.721) (-2248.142) (-2245.811) [-2240.919] -- 0:05:08
605000 -- [-2233.528] (-2244.495) (-2243.417) (-2248.535) * (-2260.152) (-2251.054) [-2234.388] (-2238.281) -- 0:05:08
Average standard deviation of split frequencies: 0.008125
606000 -- (-2236.279) (-2251.150) [-2242.339] (-2248.549) * (-2257.095) (-2249.451) [-2243.944] (-2259.788) -- 0:05:07
607000 -- (-2246.013) (-2237.690) [-2244.610] (-2267.423) * (-2243.400) [-2237.721] (-2239.994) (-2249.183) -- 0:05:06
608000 -- (-2239.091) [-2239.022] (-2251.426) (-2267.829) * [-2231.866] (-2249.762) (-2236.017) (-2252.446) -- 0:05:05
609000 -- (-2257.328) (-2244.558) [-2243.576] (-2247.571) * [-2242.972] (-2232.775) (-2272.649) (-2248.674) -- 0:05:04
610000 -- (-2239.579) (-2242.694) [-2240.342] (-2253.595) * (-2258.230) [-2233.399] (-2273.694) (-2245.827) -- 0:05:04
Average standard deviation of split frequencies: 0.007869
611000 -- (-2242.953) (-2247.788) [-2231.366] (-2250.524) * (-2240.716) [-2248.684] (-2256.217) (-2234.134) -- 0:05:03
612000 -- [-2236.247] (-2245.135) (-2249.986) (-2254.505) * (-2232.529) [-2237.407] (-2249.453) (-2254.708) -- 0:05:03
613000 -- (-2242.099) (-2239.792) (-2248.769) [-2233.731] * [-2233.618] (-2246.830) (-2229.282) (-2230.434) -- 0:05:02
614000 -- (-2240.128) (-2251.314) [-2240.353] (-2240.634) * (-2250.484) (-2239.888) [-2239.657] (-2234.575) -- 0:05:01
615000 -- (-2245.970) (-2239.524) [-2244.616] (-2241.444) * [-2237.601] (-2239.116) (-2246.736) (-2242.001) -- 0:05:01
Average standard deviation of split frequencies: 0.007863
616000 -- (-2248.604) (-2252.799) [-2232.468] (-2252.769) * [-2232.993] (-2239.563) (-2232.801) (-2251.316) -- 0:05:00
617000 -- (-2238.718) [-2241.098] (-2245.311) (-2246.352) * (-2239.839) (-2251.968) [-2236.123] (-2240.191) -- 0:04:59
618000 -- (-2260.507) [-2231.003] (-2238.016) (-2246.898) * (-2240.632) [-2235.831] (-2253.058) (-2241.068) -- 0:04:58
619000 -- (-2252.015) (-2242.360) [-2233.425] (-2243.435) * (-2242.057) (-2243.381) [-2232.784] (-2230.319) -- 0:04:57
620000 -- [-2236.071] (-2266.414) (-2247.474) (-2233.547) * [-2231.036] (-2244.951) (-2253.196) (-2236.563) -- 0:04:57
Average standard deviation of split frequencies: 0.007559
621000 -- (-2240.980) [-2240.375] (-2252.439) (-2251.437) * [-2236.396] (-2250.740) (-2242.396) (-2247.732) -- 0:04:56
622000 -- (-2259.965) (-2246.028) (-2245.303) [-2246.895] * [-2238.012] (-2249.324) (-2263.271) (-2241.481) -- 0:04:55
623000 -- (-2257.317) (-2255.087) [-2238.547] (-2244.089) * (-2246.919) (-2265.227) [-2246.210] (-2241.462) -- 0:04:54
624000 -- (-2250.649) (-2243.824) (-2235.922) [-2238.839] * (-2241.632) [-2237.892] (-2244.339) (-2243.175) -- 0:04:54
625000 -- (-2258.178) (-2246.648) (-2257.240) [-2235.077] * [-2234.014] (-2242.349) (-2247.074) (-2235.425) -- 0:04:53
Average standard deviation of split frequencies: 0.007507
626000 -- (-2265.080) (-2252.260) (-2254.215) [-2237.211] * (-2234.577) (-2253.882) [-2233.540] (-2242.850) -- 0:04:52
627000 -- (-2247.980) (-2247.303) (-2245.790) [-2238.421] * (-2240.988) (-2239.654) [-2240.429] (-2253.116) -- 0:04:52
628000 -- [-2240.641] (-2262.757) (-2247.560) (-2241.123) * (-2245.802) [-2245.214] (-2248.653) (-2249.574) -- 0:04:51
629000 -- (-2238.069) [-2249.297] (-2247.981) (-2251.178) * (-2244.551) (-2238.757) [-2236.458] (-2263.732) -- 0:04:50
630000 -- [-2237.179] (-2251.197) (-2242.972) (-2257.404) * [-2234.521] (-2237.065) (-2240.236) (-2257.154) -- 0:04:49
Average standard deviation of split frequencies: 0.007736
631000 -- (-2250.193) (-2264.399) [-2239.674] (-2244.747) * (-2243.690) [-2246.131] (-2256.456) (-2250.949) -- 0:04:48
632000 -- [-2242.367] (-2263.837) (-2234.052) (-2238.758) * (-2232.827) (-2241.870) (-2263.020) [-2244.008] -- 0:04:48
633000 -- (-2245.448) (-2252.413) (-2245.120) [-2240.604] * (-2256.604) (-2250.652) (-2247.961) [-2234.073] -- 0:04:47
634000 -- (-2245.527) (-2245.733) [-2234.574] (-2244.775) * (-2248.006) (-2263.640) (-2247.029) [-2238.411] -- 0:04:46
635000 -- (-2241.764) (-2240.068) [-2237.366] (-2240.957) * (-2251.467) (-2261.418) [-2238.125] (-2237.335) -- 0:04:46
Average standard deviation of split frequencies: 0.007789
636000 -- (-2247.523) (-2243.068) [-2247.262] (-2238.866) * (-2259.668) (-2247.190) (-2243.761) [-2243.733] -- 0:04:45
637000 -- (-2242.448) (-2247.156) (-2236.846) [-2236.863] * (-2244.336) (-2244.801) (-2258.102) [-2240.820] -- 0:04:44
638000 -- (-2243.215) [-2242.693] (-2242.199) (-2255.287) * (-2258.943) (-2247.832) (-2240.648) [-2234.357] -- 0:04:43
639000 -- [-2250.175] (-2254.487) (-2237.094) (-2258.850) * (-2243.687) (-2245.980) (-2251.283) [-2236.823] -- 0:04:43
640000 -- (-2236.726) (-2254.351) [-2236.782] (-2256.715) * [-2236.705] (-2238.915) (-2252.716) (-2246.327) -- 0:04:42
Average standard deviation of split frequencies: 0.007767
641000 -- (-2246.281) (-2240.830) [-2241.189] (-2261.570) * (-2239.781) [-2240.949] (-2245.129) (-2256.520) -- 0:04:41
642000 -- (-2246.530) (-2247.142) [-2237.132] (-2257.147) * [-2237.979] (-2245.057) (-2239.521) (-2258.756) -- 0:04:41
643000 -- (-2245.694) [-2239.535] (-2241.388) (-2260.054) * [-2239.086] (-2262.084) (-2248.506) (-2246.873) -- 0:04:39
644000 -- (-2240.842) (-2236.386) (-2234.981) [-2238.275] * [-2237.990] (-2249.051) (-2249.382) (-2241.795) -- 0:04:39
645000 -- [-2236.091] (-2239.826) (-2240.268) (-2249.558) * [-2233.394] (-2239.488) (-2240.633) (-2246.843) -- 0:04:38
Average standard deviation of split frequencies: 0.007833
646000 -- (-2244.676) (-2238.773) (-2243.528) [-2245.519] * (-2241.105) (-2248.859) [-2239.875] (-2258.003) -- 0:04:37
647000 -- (-2244.172) (-2239.003) [-2237.009] (-2251.939) * [-2240.053] (-2233.374) (-2243.164) (-2249.088) -- 0:04:37
648000 -- (-2264.956) (-2235.978) (-2243.701) [-2227.997] * [-2232.155] (-2252.642) (-2238.981) (-2250.949) -- 0:04:36
649000 -- (-2238.989) (-2251.879) (-2243.004) [-2240.954] * (-2249.749) [-2246.653] (-2242.917) (-2236.365) -- 0:04:35
650000 -- (-2252.601) (-2261.953) (-2243.849) [-2242.691] * (-2241.020) [-2256.040] (-2243.431) (-2252.356) -- 0:04:34
Average standard deviation of split frequencies: 0.007590
651000 -- [-2241.435] (-2250.260) (-2244.629) (-2248.825) * [-2231.933] (-2255.000) (-2257.428) (-2261.834) -- 0:04:33
652000 -- [-2240.917] (-2248.855) (-2240.469) (-2243.519) * [-2233.587] (-2242.156) (-2244.689) (-2252.123) -- 0:04:32
653000 -- [-2239.840] (-2243.347) (-2255.136) (-2243.252) * [-2246.436] (-2233.085) (-2253.361) (-2250.025) -- 0:04:32
654000 -- (-2247.903) [-2243.217] (-2257.081) (-2237.843) * (-2233.730) [-2232.757] (-2256.870) (-2246.600) -- 0:04:31
655000 -- (-2233.479) (-2238.309) (-2250.824) [-2239.160] * (-2237.034) (-2253.552) [-2242.408] (-2252.793) -- 0:04:30
Average standard deviation of split frequencies: 0.007198
656000 -- [-2240.141] (-2248.760) (-2251.856) (-2239.316) * (-2239.094) [-2245.831] (-2257.321) (-2264.337) -- 0:04:30
657000 -- (-2272.672) (-2242.054) (-2241.334) [-2238.113] * (-2249.732) [-2240.668] (-2240.919) (-2243.813) -- 0:04:28
658000 -- (-2256.751) (-2237.276) (-2237.548) [-2232.921] * [-2235.357] (-2249.116) (-2246.313) (-2253.364) -- 0:04:28
659000 -- (-2247.045) (-2236.766) [-2236.471] (-2245.364) * (-2236.731) (-2248.382) [-2244.585] (-2244.659) -- 0:04:27
660000 -- (-2243.290) (-2245.039) (-2239.733) [-2237.655] * (-2241.449) (-2241.954) [-2244.815] (-2245.384) -- 0:04:26
Average standard deviation of split frequencies: 0.007603
661000 -- (-2239.716) (-2247.764) [-2232.593] (-2240.351) * (-2243.906) (-2249.479) (-2250.837) [-2244.719] -- 0:04:26
662000 -- (-2251.580) (-2243.113) [-2241.208] (-2241.743) * (-2242.204) [-2238.745] (-2247.372) (-2242.989) -- 0:04:25
663000 -- (-2243.577) (-2242.749) (-2245.186) [-2232.447] * (-2252.501) [-2237.987] (-2251.090) (-2243.028) -- 0:04:24
664000 -- (-2242.122) (-2250.163) (-2245.314) [-2240.787] * (-2246.117) (-2236.993) [-2242.009] (-2244.006) -- 0:04:23
665000 -- (-2234.927) (-2246.214) [-2240.967] (-2239.750) * (-2242.130) [-2244.759] (-2244.629) (-2237.430) -- 0:04:22
Average standard deviation of split frequencies: 0.007507
666000 -- [-2238.660] (-2240.644) (-2247.278) (-2251.667) * (-2262.121) (-2243.873) (-2244.624) [-2232.963] -- 0:04:22
667000 -- (-2235.012) (-2247.646) (-2254.019) [-2237.309] * (-2247.682) [-2235.625] (-2239.182) (-2239.661) -- 0:04:21
668000 -- (-2251.277) (-2245.475) (-2268.185) [-2241.235] * (-2264.560) [-2242.652] (-2234.667) (-2241.303) -- 0:04:20
669000 -- [-2235.578] (-2258.848) (-2248.105) (-2244.261) * (-2274.038) [-2229.182] (-2237.750) (-2249.402) -- 0:04:20
670000 -- (-2250.017) (-2258.136) [-2237.358] (-2233.654) * (-2272.665) (-2230.482) (-2252.481) [-2240.969] -- 0:04:19
Average standard deviation of split frequencies: 0.007528
671000 -- (-2249.011) (-2242.861) (-2240.211) [-2240.550] * (-2257.929) (-2233.162) (-2252.193) [-2238.980] -- 0:04:18
672000 -- (-2235.644) (-2251.622) (-2248.107) [-2231.640] * (-2248.571) [-2233.476] (-2245.561) (-2234.538) -- 0:04:17
673000 -- (-2236.436) (-2257.008) (-2253.882) [-2243.316] * (-2240.172) (-2237.456) (-2262.768) [-2238.717] -- 0:04:17
674000 -- (-2238.974) (-2238.973) (-2250.124) [-2246.238] * (-2259.178) [-2237.561] (-2239.267) (-2245.264) -- 0:04:16
675000 -- (-2241.257) [-2235.782] (-2238.634) (-2271.843) * (-2245.436) [-2243.480] (-2252.902) (-2249.358) -- 0:04:15
Average standard deviation of split frequencies: 0.007339
676000 -- (-2240.581) (-2233.278) [-2230.954] (-2257.298) * [-2243.740] (-2227.532) (-2232.007) (-2244.957) -- 0:04:14
677000 -- [-2242.658] (-2238.669) (-2245.141) (-2247.944) * (-2252.941) [-2238.209] (-2242.814) (-2252.880) -- 0:04:14
678000 -- (-2245.249) [-2237.137] (-2239.649) (-2257.635) * (-2239.477) [-2230.947] (-2237.105) (-2244.208) -- 0:04:13
679000 -- [-2240.934] (-2230.213) (-2245.039) (-2238.812) * (-2253.637) (-2241.757) [-2237.192] (-2239.623) -- 0:04:12
680000 -- (-2242.443) [-2234.876] (-2244.428) (-2242.764) * (-2237.380) [-2260.144] (-2244.719) (-2233.667) -- 0:04:11
Average standard deviation of split frequencies: 0.007278
681000 -- [-2237.359] (-2243.017) (-2255.666) (-2248.774) * (-2247.061) (-2250.963) [-2234.026] (-2241.907) -- 0:04:11
682000 -- (-2255.973) [-2235.255] (-2253.193) (-2262.143) * (-2249.168) (-2240.407) (-2248.456) [-2228.770] -- 0:04:10
683000 -- (-2258.858) [-2232.207] (-2252.055) (-2251.220) * [-2241.963] (-2245.365) (-2245.519) (-2255.436) -- 0:04:09
684000 -- (-2249.656) [-2239.420] (-2244.713) (-2237.345) * (-2247.602) (-2273.111) (-2239.566) [-2233.558] -- 0:04:09
685000 -- (-2250.205) (-2239.708) [-2229.114] (-2237.918) * (-2243.768) (-2245.073) [-2242.622] (-2234.024) -- 0:04:08
Average standard deviation of split frequencies: 0.007198
686000 -- (-2237.195) [-2238.206] (-2248.900) (-2249.194) * (-2239.136) (-2250.488) (-2239.756) [-2236.769] -- 0:04:07
687000 -- (-2237.096) [-2233.463] (-2252.913) (-2258.746) * (-2242.157) [-2242.058] (-2255.025) (-2236.222) -- 0:04:06
688000 -- (-2237.545) [-2232.346] (-2247.070) (-2259.137) * (-2235.059) (-2260.289) (-2242.948) [-2232.136] -- 0:04:05
689000 -- [-2247.737] (-2231.814) (-2273.796) (-2243.966) * (-2248.372) (-2250.470) (-2266.826) [-2241.694] -- 0:04:05
690000 -- [-2240.842] (-2239.258) (-2255.597) (-2256.828) * (-2238.629) [-2254.100] (-2261.839) (-2242.044) -- 0:04:04
Average standard deviation of split frequencies: 0.007079
691000 -- [-2230.042] (-2239.892) (-2250.099) (-2241.334) * (-2245.245) (-2255.993) (-2248.198) [-2234.850] -- 0:04:03
692000 -- [-2242.347] (-2231.765) (-2240.613) (-2240.367) * [-2233.878] (-2242.668) (-2244.921) (-2247.349) -- 0:04:03
693000 -- [-2232.826] (-2232.367) (-2242.733) (-2248.603) * [-2234.560] (-2255.207) (-2248.518) (-2244.075) -- 0:04:02
694000 -- (-2241.120) [-2238.586] (-2233.063) (-2267.903) * (-2246.348) (-2249.466) (-2239.610) [-2239.050] -- 0:04:01
695000 -- (-2232.880) (-2243.509) (-2268.249) [-2242.221] * (-2239.084) (-2244.440) (-2240.324) [-2236.547] -- 0:04:00
Average standard deviation of split frequencies: 0.007123
696000 -- (-2237.235) [-2238.576] (-2255.416) (-2250.531) * (-2252.477) (-2246.864) (-2246.883) [-2239.776] -- 0:03:59
697000 -- (-2239.275) [-2234.017] (-2258.769) (-2240.600) * (-2234.270) (-2253.799) [-2243.434] (-2242.643) -- 0:03:59
698000 -- (-2243.691) [-2236.547] (-2258.409) (-2243.623) * (-2254.169) [-2240.874] (-2237.352) (-2253.339) -- 0:03:58
699000 -- (-2246.714) (-2255.592) (-2246.936) [-2241.706] * (-2261.341) (-2237.456) (-2236.371) [-2243.000] -- 0:03:57
700000 -- (-2244.362) [-2250.547] (-2245.237) (-2244.657) * (-2256.614) (-2253.552) (-2254.015) [-2241.504] -- 0:03:57
Average standard deviation of split frequencies: 0.007173
701000 -- (-2237.431) (-2244.255) (-2249.648) [-2231.912] * (-2250.559) (-2243.683) [-2249.867] (-2241.185) -- 0:03:55
702000 -- (-2244.588) (-2240.766) (-2253.960) [-2235.376] * (-2267.123) (-2257.036) [-2239.387] (-2263.814) -- 0:03:55
703000 -- (-2251.143) (-2239.793) [-2240.837] (-2241.818) * (-2246.168) (-2251.769) [-2239.766] (-2264.108) -- 0:03:54
704000 -- (-2234.248) (-2240.246) [-2239.163] (-2234.432) * [-2241.028] (-2258.217) (-2238.538) (-2251.501) -- 0:03:53
705000 -- (-2241.291) [-2241.878] (-2247.031) (-2231.319) * (-2250.960) (-2248.466) [-2237.506] (-2240.596) -- 0:03:53
Average standard deviation of split frequencies: 0.007259
706000 -- (-2239.339) [-2232.208] (-2252.902) (-2259.195) * (-2250.448) (-2255.435) [-2245.437] (-2257.575) -- 0:03:51
707000 -- (-2244.495) (-2240.379) (-2260.692) [-2233.652] * (-2239.923) (-2240.828) [-2241.982] (-2262.853) -- 0:03:51
708000 -- (-2249.049) (-2246.937) (-2240.680) [-2233.376] * (-2231.771) (-2250.403) [-2236.663] (-2250.660) -- 0:03:50
709000 -- (-2265.902) (-2243.292) (-2237.963) [-2240.526] * (-2240.730) (-2246.871) [-2240.427] (-2256.587) -- 0:03:49
710000 -- (-2230.716) [-2231.655] (-2244.745) (-2255.508) * (-2256.136) (-2249.170) (-2242.311) [-2238.405] -- 0:03:49
Average standard deviation of split frequencies: 0.007244
711000 -- (-2256.584) (-2245.236) (-2252.823) [-2242.828] * (-2256.431) (-2252.337) [-2237.112] (-2246.912) -- 0:03:48
712000 -- [-2239.766] (-2247.813) (-2252.997) (-2238.619) * [-2232.800] (-2248.017) (-2238.246) (-2245.816) -- 0:03:47
713000 -- (-2247.094) (-2242.465) (-2259.117) [-2246.800] * (-2246.998) (-2230.438) (-2237.666) [-2244.305] -- 0:03:47
714000 -- [-2235.354] (-2238.704) (-2271.261) (-2246.771) * (-2240.619) (-2266.779) (-2239.067) [-2238.122] -- 0:03:46
715000 -- (-2237.149) (-2237.560) (-2249.151) [-2235.076] * (-2242.285) (-2249.393) [-2243.818] (-2243.764) -- 0:03:45
Average standard deviation of split frequencies: 0.007106
716000 -- (-2240.170) (-2238.882) [-2219.872] (-2250.718) * [-2240.603] (-2248.943) (-2244.107) (-2258.250) -- 0:03:44
717000 -- (-2249.607) [-2236.541] (-2231.518) (-2247.976) * [-2235.043] (-2239.035) (-2252.976) (-2239.047) -- 0:03:43
718000 -- (-2235.956) (-2245.197) [-2234.842] (-2251.797) * (-2242.419) [-2236.291] (-2270.776) (-2238.653) -- 0:03:43
719000 -- (-2257.577) [-2239.005] (-2245.831) (-2242.773) * (-2246.926) [-2242.350] (-2246.911) (-2242.151) -- 0:03:42
720000 -- (-2239.139) (-2241.159) [-2236.929] (-2265.447) * (-2238.876) (-2244.370) [-2237.380] (-2253.947) -- 0:03:41
Average standard deviation of split frequencies: 0.007335
721000 -- [-2245.840] (-2237.261) (-2247.422) (-2247.333) * [-2242.410] (-2246.320) (-2237.340) (-2254.190) -- 0:03:40
722000 -- (-2251.076) [-2239.284] (-2241.052) (-2249.720) * [-2243.081] (-2248.381) (-2237.279) (-2254.896) -- 0:03:40
723000 -- (-2264.852) (-2251.590) (-2259.032) [-2257.015] * [-2240.717] (-2258.584) (-2259.073) (-2249.340) -- 0:03:39
724000 -- (-2257.195) [-2244.779] (-2240.354) (-2249.730) * (-2238.427) (-2248.037) (-2249.030) [-2241.173] -- 0:03:38
725000 -- (-2243.531) (-2264.334) [-2237.527] (-2249.856) * (-2248.991) (-2239.766) (-2243.357) [-2236.941] -- 0:03:37
Average standard deviation of split frequencies: 0.007142
726000 -- [-2243.850] (-2254.026) (-2243.092) (-2255.825) * [-2244.715] (-2244.911) (-2238.405) (-2241.871) -- 0:03:37
727000 -- (-2239.428) (-2238.457) [-2237.760] (-2247.466) * [-2246.870] (-2271.108) (-2249.856) (-2246.153) -- 0:03:36
728000 -- (-2235.825) (-2259.170) [-2245.213] (-2243.833) * (-2252.448) (-2250.773) [-2227.764] (-2250.728) -- 0:03:35
729000 -- (-2247.166) (-2251.838) [-2239.255] (-2243.752) * (-2245.827) [-2243.372] (-2233.085) (-2249.539) -- 0:03:34
730000 -- (-2240.921) [-2243.085] (-2255.927) (-2228.707) * (-2235.511) [-2250.743] (-2241.375) (-2259.024) -- 0:03:34
Average standard deviation of split frequencies: 0.006938
731000 -- (-2240.580) (-2257.934) (-2248.071) [-2232.877] * (-2247.781) [-2237.725] (-2247.057) (-2245.059) -- 0:03:33
732000 -- (-2237.949) (-2248.165) [-2240.101] (-2230.385) * (-2257.081) (-2236.935) [-2238.142] (-2243.792) -- 0:03:32
733000 -- (-2243.887) (-2243.903) [-2235.944] (-2246.374) * (-2247.029) (-2255.367) [-2238.841] (-2252.244) -- 0:03:31
734000 -- (-2250.825) [-2236.790] (-2248.032) (-2246.806) * (-2235.675) [-2234.474] (-2258.574) (-2247.694) -- 0:03:30
735000 -- [-2233.089] (-2245.095) (-2258.188) (-2255.347) * (-2246.750) [-2231.795] (-2241.251) (-2258.873) -- 0:03:30
Average standard deviation of split frequencies: 0.006904
736000 -- (-2241.200) (-2251.422) [-2242.287] (-2253.113) * [-2238.413] (-2242.202) (-2256.595) (-2246.331) -- 0:03:29
737000 -- (-2239.764) (-2251.229) [-2246.629] (-2250.759) * (-2240.363) (-2240.814) [-2245.052] (-2260.466) -- 0:03:28
738000 -- [-2241.316] (-2255.863) (-2258.621) (-2248.860) * (-2247.981) [-2239.241] (-2245.649) (-2242.117) -- 0:03:28
739000 -- (-2256.487) (-2253.350) (-2249.433) [-2259.267] * [-2250.310] (-2239.512) (-2255.763) (-2236.118) -- 0:03:27
740000 -- (-2254.321) [-2252.763] (-2250.697) (-2248.853) * (-2259.720) (-2240.954) (-2246.948) [-2238.483] -- 0:03:26
Average standard deviation of split frequencies: 0.007043
741000 -- [-2233.478] (-2243.099) (-2261.210) (-2253.712) * (-2250.288) [-2237.717] (-2254.893) (-2248.401) -- 0:03:25
742000 -- [-2234.050] (-2252.811) (-2246.928) (-2259.523) * (-2255.938) [-2235.810] (-2255.500) (-2247.695) -- 0:03:24
743000 -- [-2235.058] (-2246.034) (-2255.088) (-2253.738) * (-2242.665) (-2235.481) (-2238.326) [-2251.055] -- 0:03:24
744000 -- (-2237.751) (-2243.479) (-2249.733) [-2244.317] * (-2254.758) [-2244.541] (-2238.840) (-2238.264) -- 0:03:23
745000 -- [-2237.143] (-2242.518) (-2247.223) (-2246.379) * [-2236.727] (-2246.893) (-2236.885) (-2252.743) -- 0:03:22
Average standard deviation of split frequencies: 0.006868
746000 -- (-2240.200) [-2249.543] (-2240.845) (-2255.191) * (-2254.845) (-2253.843) [-2242.015] (-2247.354) -- 0:03:21
747000 -- (-2240.385) (-2246.391) [-2230.883] (-2246.645) * (-2256.141) [-2238.523] (-2241.620) (-2246.368) -- 0:03:20
748000 -- [-2242.482] (-2266.673) (-2236.105) (-2243.968) * (-2252.958) [-2239.020] (-2243.749) (-2246.326) -- 0:03:20
749000 -- [-2248.215] (-2248.267) (-2242.837) (-2249.057) * (-2252.254) (-2241.255) [-2235.839] (-2244.669) -- 0:03:19
750000 -- [-2235.944] (-2265.812) (-2242.018) (-2242.785) * (-2246.959) (-2258.936) (-2241.191) [-2232.068] -- 0:03:18
Average standard deviation of split frequencies: 0.007012
751000 -- (-2247.817) (-2245.645) (-2247.138) [-2238.494] * (-2241.857) (-2241.267) (-2241.367) [-2231.031] -- 0:03:17
752000 -- [-2234.901] (-2254.485) (-2248.609) (-2257.225) * (-2249.699) (-2252.439) (-2230.177) [-2239.011] -- 0:03:17
753000 -- (-2237.595) [-2241.799] (-2247.623) (-2240.976) * (-2261.965) (-2241.831) (-2237.461) [-2235.372] -- 0:03:16
754000 -- (-2242.096) (-2246.678) [-2241.549] (-2241.751) * (-2257.268) (-2243.340) [-2243.855] (-2240.919) -- 0:03:15
755000 -- (-2233.586) (-2241.966) [-2238.292] (-2234.650) * (-2269.071) (-2249.545) [-2240.307] (-2241.785) -- 0:03:14
Average standard deviation of split frequencies: 0.006786
756000 -- (-2241.033) [-2243.386] (-2238.840) (-2240.225) * (-2263.977) (-2250.081) [-2233.602] (-2249.045) -- 0:03:13
757000 -- (-2239.397) [-2233.172] (-2261.166) (-2249.232) * (-2248.248) (-2257.153) (-2246.832) [-2245.863] -- 0:03:13
758000 -- (-2248.504) [-2238.546] (-2236.793) (-2242.482) * (-2240.606) (-2252.801) (-2232.131) [-2237.943] -- 0:03:12
759000 -- (-2250.680) [-2238.497] (-2245.064) (-2238.046) * (-2233.978) (-2239.627) [-2233.978] (-2248.994) -- 0:03:11
760000 -- (-2230.772) (-2250.034) (-2252.801) [-2233.376] * (-2248.998) (-2248.795) [-2230.817] (-2238.934) -- 0:03:11
Average standard deviation of split frequencies: 0.006617
761000 -- [-2241.409] (-2240.266) (-2261.415) (-2245.895) * [-2229.430] (-2259.511) (-2251.524) (-2234.365) -- 0:03:10
762000 -- [-2235.149] (-2241.956) (-2259.002) (-2256.210) * [-2239.802] (-2239.378) (-2253.581) (-2239.445) -- 0:03:09
763000 -- (-2249.538) (-2252.178) (-2240.665) [-2238.981] * (-2236.522) [-2236.611] (-2251.786) (-2261.154) -- 0:03:08
764000 -- (-2232.623) (-2252.951) [-2234.690] (-2245.942) * (-2238.411) [-2233.800] (-2260.569) (-2241.894) -- 0:03:07
765000 -- (-2248.407) [-2240.923] (-2237.580) (-2249.572) * [-2236.164] (-2241.943) (-2251.527) (-2244.310) -- 0:03:07
Average standard deviation of split frequencies: 0.006482
766000 -- (-2243.956) (-2241.610) [-2252.475] (-2244.209) * [-2229.635] (-2250.795) (-2240.711) (-2241.135) -- 0:03:06
767000 -- (-2237.293) (-2237.502) [-2243.728] (-2238.108) * [-2241.171] (-2242.535) (-2246.518) (-2240.139) -- 0:03:05
768000 -- [-2246.198] (-2261.528) (-2245.637) (-2248.394) * (-2237.471) (-2240.069) [-2241.110] (-2247.690) -- 0:03:04
769000 -- (-2231.337) (-2251.042) [-2235.674] (-2259.302) * [-2247.323] (-2247.922) (-2251.960) (-2242.915) -- 0:03:03
770000 -- [-2239.121] (-2242.265) (-2244.533) (-2270.057) * (-2242.601) (-2244.206) (-2239.532) [-2236.533] -- 0:03:03
Average standard deviation of split frequencies: 0.006392
771000 -- (-2245.493) [-2245.392] (-2255.404) (-2244.364) * (-2242.562) (-2242.386) [-2233.367] (-2254.323) -- 0:03:02
772000 -- [-2236.891] (-2237.143) (-2248.888) (-2245.116) * [-2236.413] (-2251.573) (-2246.126) (-2253.985) -- 0:03:01
773000 -- (-2264.442) [-2240.996] (-2256.176) (-2238.759) * (-2238.657) (-2259.526) [-2244.330] (-2251.462) -- 0:03:00
774000 -- [-2236.387] (-2248.771) (-2269.222) (-2252.682) * [-2224.226] (-2251.386) (-2240.805) (-2239.102) -- 0:03:00
775000 -- (-2251.639) [-2243.196] (-2252.562) (-2238.324) * (-2261.061) (-2242.920) (-2234.628) [-2233.147] -- 0:02:59
Average standard deviation of split frequencies: 0.006284
776000 -- [-2239.779] (-2240.266) (-2252.637) (-2261.818) * (-2264.048) (-2249.723) (-2230.770) [-2235.039] -- 0:02:58
777000 -- (-2244.547) (-2248.387) (-2251.137) [-2243.312] * (-2255.155) [-2238.873] (-2254.607) (-2241.253) -- 0:02:57
778000 -- (-2236.682) [-2239.046] (-2269.856) (-2249.461) * (-2245.397) [-2242.910] (-2252.870) (-2241.317) -- 0:02:56
779000 -- (-2234.754) (-2238.193) [-2251.863] (-2251.733) * (-2245.761) (-2236.351) (-2248.217) [-2235.376] -- 0:02:56
780000 -- (-2239.947) [-2240.496] (-2258.428) (-2263.819) * (-2248.823) [-2239.985] (-2252.197) (-2241.784) -- 0:02:55
Average standard deviation of split frequencies: 0.006068
781000 -- [-2234.105] (-2249.724) (-2249.672) (-2244.245) * (-2241.811) [-2223.980] (-2251.341) (-2252.529) -- 0:02:54
782000 -- (-2245.947) (-2238.063) (-2255.669) [-2245.997] * (-2239.585) [-2234.116] (-2258.707) (-2243.153) -- 0:02:53
783000 -- (-2252.103) (-2244.625) (-2239.293) [-2241.619] * [-2246.729] (-2258.953) (-2241.128) (-2255.143) -- 0:02:53
784000 -- (-2251.440) (-2232.410) [-2235.592] (-2254.249) * (-2253.281) (-2253.299) [-2243.609] (-2237.238) -- 0:02:52
785000 -- (-2251.295) [-2230.261] (-2265.493) (-2246.154) * (-2256.742) [-2235.761] (-2237.076) (-2241.175) -- 0:02:51
Average standard deviation of split frequencies: 0.005988
786000 -- (-2246.093) (-2232.351) (-2278.228) [-2236.891] * (-2248.713) [-2233.963] (-2257.342) (-2241.179) -- 0:02:50
787000 -- (-2240.377) [-2241.849] (-2259.340) (-2248.101) * (-2248.172) [-2230.742] (-2240.420) (-2261.957) -- 0:02:49
788000 -- (-2232.065) [-2238.446] (-2253.540) (-2245.756) * (-2259.767) [-2237.044] (-2237.196) (-2245.196) -- 0:02:48
789000 -- (-2246.887) (-2230.650) (-2249.465) [-2245.767] * (-2243.247) (-2242.967) [-2240.918] (-2244.122) -- 0:02:47
790000 -- (-2246.862) (-2236.263) [-2242.733] (-2239.844) * (-2255.397) (-2242.763) [-2241.034] (-2241.502) -- 0:02:47
Average standard deviation of split frequencies: 0.005982
791000 -- (-2250.320) (-2254.164) [-2237.409] (-2251.507) * (-2256.413) (-2240.819) [-2235.108] (-2249.491) -- 0:02:46
792000 -- (-2245.620) [-2236.688] (-2226.037) (-2254.407) * [-2244.998] (-2244.833) (-2256.413) (-2240.553) -- 0:02:45
793000 -- (-2254.507) [-2235.682] (-2252.106) (-2244.514) * (-2240.784) [-2241.940] (-2257.508) (-2241.038) -- 0:02:44
794000 -- (-2255.240) (-2246.600) [-2240.263] (-2241.169) * (-2240.634) (-2253.843) (-2251.568) [-2231.396] -- 0:02:43
795000 -- (-2266.493) [-2234.847] (-2246.306) (-2245.021) * (-2239.603) (-2248.502) (-2261.879) [-2239.486] -- 0:02:42
Average standard deviation of split frequencies: 0.006053
796000 -- (-2252.477) [-2240.219] (-2267.783) (-2251.249) * [-2233.500] (-2245.662) (-2253.277) (-2242.108) -- 0:02:42
797000 -- [-2237.031] (-2248.498) (-2263.160) (-2253.776) * (-2240.993) (-2257.829) [-2235.972] (-2255.631) -- 0:02:41
798000 -- [-2232.296] (-2259.436) (-2239.362) (-2247.922) * (-2246.235) (-2255.979) [-2250.612] (-2248.042) -- 0:02:40
799000 -- (-2242.195) (-2246.893) [-2244.436] (-2248.444) * [-2232.233] (-2251.648) (-2255.774) (-2254.423) -- 0:02:39
800000 -- (-2252.560) (-2243.480) [-2234.126] (-2240.968) * (-2234.384) (-2249.003) (-2256.984) [-2241.382] -- 0:02:39
Average standard deviation of split frequencies: 0.006237
801000 -- (-2242.522) [-2238.679] (-2246.684) (-2265.213) * (-2246.580) (-2258.464) [-2240.779] (-2241.150) -- 0:02:38
802000 -- (-2245.749) (-2244.266) (-2268.682) [-2230.702] * (-2239.203) (-2247.088) [-2242.508] (-2256.069) -- 0:02:37
803000 -- (-2245.935) (-2249.327) (-2267.341) [-2234.812] * [-2241.798] (-2246.351) (-2241.798) (-2248.812) -- 0:02:36
804000 -- (-2238.344) [-2247.303] (-2264.793) (-2234.850) * (-2260.955) (-2247.925) [-2243.681] (-2251.316) -- 0:02:36
805000 -- [-2233.309] (-2236.638) (-2257.683) (-2249.470) * (-2259.165) (-2255.084) [-2231.392] (-2246.151) -- 0:02:35
Average standard deviation of split frequencies: 0.006265
806000 -- (-2247.504) [-2234.544] (-2255.110) (-2242.677) * (-2248.792) (-2240.740) (-2232.965) [-2242.072] -- 0:02:34
807000 -- (-2247.820) [-2233.874] (-2252.469) (-2240.070) * [-2237.327] (-2253.322) (-2242.843) (-2248.662) -- 0:02:33
808000 -- (-2235.841) (-2247.876) (-2244.179) [-2239.420] * (-2255.775) [-2242.218] (-2254.237) (-2248.132) -- 0:02:32
809000 -- (-2252.188) [-2231.944] (-2253.709) (-2235.780) * (-2254.634) [-2233.371] (-2236.350) (-2243.580) -- 0:02:32
810000 -- (-2255.087) [-2232.341] (-2256.810) (-2240.178) * (-2255.919) (-2252.151) [-2246.664] (-2246.774) -- 0:02:31
Average standard deviation of split frequencies: 0.006183
811000 -- (-2249.377) [-2235.516] (-2255.413) (-2238.440) * (-2264.116) (-2245.973) [-2235.292] (-2242.031) -- 0:02:30
812000 -- [-2240.385] (-2246.213) (-2263.737) (-2242.695) * (-2253.594) (-2253.408) (-2242.905) [-2246.211] -- 0:02:29
813000 -- (-2260.599) [-2243.834] (-2262.945) (-2244.413) * (-2256.767) (-2248.001) [-2236.404] (-2241.034) -- 0:02:28
814000 -- (-2255.996) (-2240.050) (-2265.242) [-2238.311] * (-2232.208) (-2263.025) [-2235.127] (-2241.079) -- 0:02:28
815000 -- (-2239.396) (-2238.729) (-2242.170) [-2236.483] * (-2244.393) (-2262.208) [-2238.488] (-2235.888) -- 0:02:27
Average standard deviation of split frequencies: 0.006232
816000 -- [-2237.641] (-2235.057) (-2252.324) (-2237.841) * [-2238.082] (-2248.508) (-2241.487) (-2242.541) -- 0:02:26
817000 -- (-2233.988) (-2248.188) (-2254.469) [-2239.746] * (-2252.186) (-2265.692) [-2241.832] (-2242.851) -- 0:02:25
818000 -- (-2268.544) [-2259.236] (-2241.452) (-2241.663) * [-2226.736] (-2257.992) (-2241.201) (-2242.010) -- 0:02:25
819000 -- (-2262.999) (-2250.055) (-2240.231) [-2237.516] * [-2242.859] (-2252.355) (-2259.823) (-2242.468) -- 0:02:24
820000 -- [-2242.157] (-2245.165) (-2241.726) (-2233.108) * (-2245.409) (-2242.843) [-2229.867] (-2253.977) -- 0:02:23
Average standard deviation of split frequencies: 0.006041
821000 -- [-2234.781] (-2245.571) (-2248.307) (-2229.406) * (-2256.218) (-2240.596) (-2240.343) [-2240.508] -- 0:02:22
822000 -- (-2257.674) (-2243.783) (-2260.995) [-2231.868] * (-2242.381) [-2237.705] (-2244.492) (-2253.543) -- 0:02:21
823000 -- (-2246.937) [-2246.527] (-2253.847) (-2244.780) * (-2243.400) (-2249.833) [-2235.943] (-2247.688) -- 0:02:21
824000 -- (-2236.235) (-2240.614) (-2262.811) [-2229.045] * (-2234.734) (-2249.693) [-2241.869] (-2248.775) -- 0:02:20
825000 -- [-2230.750] (-2259.862) (-2248.891) (-2245.643) * [-2237.207] (-2250.483) (-2254.228) (-2248.344) -- 0:02:19
Average standard deviation of split frequencies: 0.006287
826000 -- (-2245.618) (-2237.692) (-2254.256) [-2243.844] * [-2236.932] (-2243.540) (-2251.909) (-2240.440) -- 0:02:18
827000 -- (-2228.979) (-2246.495) (-2244.925) [-2242.478] * (-2242.537) (-2235.281) (-2244.715) [-2231.244] -- 0:02:17
828000 -- [-2234.369] (-2249.541) (-2255.651) (-2245.273) * (-2253.996) (-2252.890) [-2240.570] (-2249.492) -- 0:02:17
829000 -- (-2235.257) [-2228.354] (-2255.120) (-2233.251) * (-2254.010) (-2245.318) [-2232.948] (-2233.082) -- 0:02:16
830000 -- (-2239.373) [-2239.224] (-2241.763) (-2242.854) * (-2250.915) [-2244.459] (-2245.040) (-2251.305) -- 0:02:15
Average standard deviation of split frequencies: 0.006143
831000 -- [-2247.224] (-2244.836) (-2240.661) (-2234.951) * (-2247.822) (-2244.368) (-2243.125) [-2243.482] -- 0:02:14
832000 -- (-2238.734) (-2243.681) [-2244.983] (-2254.040) * (-2253.241) (-2237.651) (-2249.251) [-2238.173] -- 0:02:13
833000 -- (-2245.996) (-2245.368) (-2233.139) [-2242.310] * (-2250.703) [-2235.926] (-2244.447) (-2240.135) -- 0:02:12
834000 -- (-2241.034) (-2247.746) [-2229.896] (-2245.370) * (-2240.304) [-2232.190] (-2259.816) (-2235.425) -- 0:02:11
835000 -- [-2232.956] (-2247.969) (-2240.862) (-2232.396) * (-2253.288) [-2241.900] (-2243.406) (-2237.283) -- 0:02:11
Average standard deviation of split frequencies: 0.006185
836000 -- (-2235.949) (-2249.541) (-2249.706) [-2236.457] * (-2239.162) (-2234.225) (-2259.384) [-2233.850] -- 0:02:10
837000 -- (-2252.309) (-2255.202) (-2258.035) [-2238.597] * (-2251.753) (-2240.943) (-2229.295) [-2238.669] -- 0:02:09
838000 -- (-2235.838) (-2247.679) [-2238.374] (-2248.877) * (-2246.943) (-2250.143) [-2236.830] (-2241.471) -- 0:02:08
839000 -- (-2230.260) (-2259.421) [-2238.972] (-2260.722) * (-2270.739) (-2250.852) (-2248.083) [-2239.918] -- 0:02:08
840000 -- [-2241.175] (-2256.498) (-2241.363) (-2244.970) * (-2258.454) (-2248.290) (-2252.829) [-2240.558] -- 0:02:07
Average standard deviation of split frequencies: 0.006213
841000 -- [-2228.340] (-2269.485) (-2242.129) (-2248.270) * [-2238.139] (-2239.993) (-2254.715) (-2245.901) -- 0:02:06
842000 -- [-2235.107] (-2240.019) (-2240.245) (-2255.045) * [-2237.569] (-2245.229) (-2242.288) (-2249.723) -- 0:02:05
843000 -- (-2249.275) [-2239.296] (-2240.469) (-2242.731) * (-2241.633) [-2233.685] (-2244.169) (-2253.971) -- 0:02:04
844000 -- (-2270.718) (-2250.013) (-2241.929) [-2236.265] * [-2238.909] (-2251.051) (-2248.674) (-2251.822) -- 0:02:04
845000 -- (-2255.384) (-2241.118) (-2246.896) [-2237.977] * [-2243.374] (-2249.602) (-2254.119) (-2248.593) -- 0:02:03
Average standard deviation of split frequencies: 0.006121
846000 -- (-2253.574) (-2244.080) (-2249.300) [-2241.225] * (-2249.161) [-2240.892] (-2252.346) (-2239.909) -- 0:02:02
847000 -- (-2256.445) (-2245.872) (-2240.187) [-2246.818] * (-2246.914) (-2251.270) (-2248.085) [-2246.332] -- 0:02:01
848000 -- (-2259.964) [-2245.678] (-2244.294) (-2246.224) * [-2248.496] (-2251.410) (-2259.314) (-2234.700) -- 0:02:00
849000 -- [-2236.742] (-2254.005) (-2237.834) (-2248.565) * (-2248.604) [-2240.385] (-2252.480) (-2249.139) -- 0:02:00
850000 -- (-2257.352) (-2242.171) (-2232.506) [-2232.178] * (-2250.080) (-2257.608) [-2239.899] (-2244.929) -- 0:01:59
Average standard deviation of split frequencies: 0.006061
851000 -- (-2262.253) (-2251.368) [-2240.596] (-2245.267) * (-2252.353) [-2242.827] (-2257.891) (-2241.143) -- 0:01:58
852000 -- (-2259.777) (-2253.507) [-2241.298] (-2238.770) * [-2247.495] (-2253.961) (-2239.111) (-2244.477) -- 0:01:57
853000 -- (-2267.682) [-2236.142] (-2242.107) (-2260.111) * (-2248.793) [-2248.837] (-2242.665) (-2257.834) -- 0:01:57
854000 -- (-2242.833) [-2240.686] (-2252.045) (-2250.164) * [-2245.778] (-2251.604) (-2261.833) (-2254.745) -- 0:01:56
855000 -- [-2233.809] (-2235.096) (-2259.444) (-2259.462) * (-2249.051) (-2246.432) (-2256.359) [-2233.673] -- 0:01:55
Average standard deviation of split frequencies: 0.006256
856000 -- (-2235.542) (-2246.501) (-2262.049) [-2234.266] * (-2260.519) (-2241.736) [-2237.606] (-2229.830) -- 0:01:54
857000 -- (-2244.573) [-2247.829] (-2246.061) (-2236.688) * (-2249.965) (-2260.908) (-2240.684) [-2230.035] -- 0:01:53
858000 -- (-2248.479) [-2239.221] (-2254.607) (-2245.095) * [-2238.690] (-2270.581) (-2251.816) (-2255.404) -- 0:01:53
859000 -- (-2251.668) (-2244.356) [-2239.476] (-2240.698) * (-2240.340) (-2255.943) (-2247.876) [-2248.438] -- 0:01:52
860000 -- (-2277.762) [-2247.024] (-2229.702) (-2262.108) * [-2243.012] (-2243.081) (-2230.494) (-2259.237) -- 0:01:51
Average standard deviation of split frequencies: 0.006350
861000 -- (-2258.538) [-2234.293] (-2240.207) (-2245.470) * (-2245.389) (-2253.691) [-2238.255] (-2246.997) -- 0:01:50
862000 -- (-2250.791) (-2248.896) [-2237.036] (-2241.643) * (-2258.618) (-2234.296) [-2233.281] (-2240.076) -- 0:01:49
863000 -- (-2253.018) [-2238.135] (-2242.842) (-2256.041) * (-2256.477) (-2239.440) (-2232.264) [-2233.607] -- 0:01:49
864000 -- (-2246.508) [-2232.936] (-2244.312) (-2236.508) * (-2245.207) (-2247.323) [-2243.893] (-2239.703) -- 0:01:48
865000 -- (-2256.821) (-2240.483) [-2241.738] (-2253.444) * (-2246.019) (-2246.806) (-2247.387) [-2230.921] -- 0:01:47
Average standard deviation of split frequencies: 0.006405
866000 -- [-2236.727] (-2235.282) (-2235.665) (-2251.262) * (-2234.091) (-2231.140) (-2257.503) [-2243.420] -- 0:01:46
867000 -- [-2245.708] (-2244.864) (-2244.677) (-2239.074) * (-2252.460) [-2244.895] (-2250.709) (-2254.080) -- 0:01:45
868000 -- (-2243.519) [-2250.026] (-2242.846) (-2242.325) * (-2254.073) [-2231.548] (-2240.986) (-2249.352) -- 0:01:45
869000 -- (-2248.700) (-2250.062) (-2249.929) [-2229.902] * (-2255.944) [-2244.853] (-2252.181) (-2254.952) -- 0:01:44
870000 -- (-2252.695) (-2266.422) (-2246.274) [-2243.118] * (-2245.655) (-2233.462) [-2233.330] (-2255.121) -- 0:01:43
Average standard deviation of split frequencies: 0.006360
871000 -- (-2239.818) (-2256.890) (-2245.584) [-2237.194] * (-2243.073) [-2241.885] (-2241.979) (-2243.298) -- 0:01:42
872000 -- (-2254.110) [-2228.669] (-2231.313) (-2245.813) * [-2248.885] (-2243.936) (-2246.624) (-2252.432) -- 0:01:42
873000 -- (-2246.201) (-2264.570) (-2229.889) [-2239.210] * (-2245.011) (-2255.353) [-2245.420] (-2258.496) -- 0:01:41
874000 -- (-2257.216) [-2236.356] (-2243.013) (-2241.333) * [-2242.066] (-2250.604) (-2254.372) (-2244.797) -- 0:01:40
875000 -- (-2255.977) [-2233.607] (-2244.281) (-2260.984) * (-2250.713) (-2247.793) [-2231.429] (-2242.423) -- 0:01:39
Average standard deviation of split frequencies: 0.006327
876000 -- [-2244.154] (-2244.513) (-2230.436) (-2257.299) * (-2246.980) (-2244.626) (-2249.604) [-2239.353] -- 0:01:38
877000 -- (-2241.198) (-2248.643) [-2237.177] (-2250.648) * (-2250.842) [-2247.186] (-2244.970) (-2250.368) -- 0:01:37
878000 -- (-2248.412) [-2242.427] (-2249.859) (-2243.742) * [-2241.025] (-2242.672) (-2231.942) (-2258.128) -- 0:01:37
879000 -- (-2253.461) [-2237.520] (-2240.246) (-2250.335) * (-2237.628) (-2261.387) [-2235.907] (-2246.405) -- 0:01:36
880000 -- (-2249.243) (-2243.483) [-2233.563] (-2253.534) * (-2234.842) [-2253.289] (-2239.374) (-2244.668) -- 0:01:35
Average standard deviation of split frequencies: 0.006147
881000 -- (-2245.197) (-2245.014) [-2229.389] (-2248.873) * (-2238.454) (-2264.735) (-2254.764) [-2236.839] -- 0:01:34
882000 -- (-2239.963) (-2249.169) [-2233.847] (-2237.065) * (-2250.671) (-2247.597) (-2267.852) [-2245.108] -- 0:01:33
883000 -- (-2233.916) (-2252.336) [-2238.329] (-2248.116) * (-2266.650) [-2227.199] (-2254.612) (-2238.384) -- 0:01:33
884000 -- (-2244.483) [-2229.802] (-2248.374) (-2262.656) * [-2243.812] (-2235.323) (-2251.174) (-2239.762) -- 0:01:32
885000 -- (-2250.975) [-2231.433] (-2246.062) (-2239.352) * [-2232.080] (-2237.835) (-2269.750) (-2238.876) -- 0:01:31
Average standard deviation of split frequencies: 0.006024
886000 -- (-2245.694) [-2233.684] (-2263.125) (-2248.318) * [-2227.426] (-2239.254) (-2244.933) (-2247.583) -- 0:01:30
887000 -- (-2242.874) [-2227.029] (-2256.685) (-2242.236) * [-2234.044] (-2241.400) (-2266.410) (-2248.162) -- 0:01:30
888000 -- (-2252.527) [-2243.765] (-2239.379) (-2229.175) * (-2249.017) (-2259.342) [-2249.649] (-2242.999) -- 0:01:29
889000 -- (-2248.731) (-2241.567) [-2241.586] (-2237.737) * (-2248.494) (-2252.913) (-2245.618) [-2240.101] -- 0:01:28
890000 -- (-2261.503) (-2258.918) (-2230.838) [-2249.085] * [-2247.368] (-2249.304) (-2241.387) (-2252.833) -- 0:01:27
Average standard deviation of split frequencies: 0.005882
891000 -- (-2254.056) [-2238.535] (-2237.728) (-2244.512) * (-2259.982) [-2240.147] (-2250.122) (-2251.278) -- 0:01:26
892000 -- [-2237.208] (-2237.469) (-2257.497) (-2240.761) * (-2244.366) [-2235.630] (-2243.138) (-2242.169) -- 0:01:26
893000 -- [-2238.226] (-2240.504) (-2257.125) (-2239.863) * (-2233.652) [-2243.455] (-2252.045) (-2236.308) -- 0:01:25
894000 -- (-2248.990) [-2224.949] (-2256.740) (-2239.126) * (-2238.944) (-2248.482) [-2236.639] (-2239.211) -- 0:01:24
895000 -- (-2250.175) (-2236.900) (-2243.901) [-2240.577] * [-2241.459] (-2241.216) (-2246.081) (-2237.016) -- 0:01:23
Average standard deviation of split frequencies: 0.005704
896000 -- (-2244.311) [-2239.181] (-2270.540) (-2236.419) * [-2231.422] (-2256.147) (-2247.081) (-2236.823) -- 0:01:22
897000 -- (-2242.835) [-2235.859] (-2257.676) (-2245.102) * (-2241.840) (-2256.277) [-2245.439] (-2240.579) -- 0:01:22
898000 -- (-2261.880) [-2244.331] (-2260.450) (-2238.356) * (-2242.515) (-2255.966) (-2247.872) [-2235.679] -- 0:01:21
899000 -- (-2242.975) (-2260.482) (-2256.336) [-2240.663] * [-2245.710] (-2246.609) (-2246.752) (-2252.739) -- 0:01:20
900000 -- (-2247.992) [-2248.644] (-2235.588) (-2236.756) * (-2243.292) (-2253.101) (-2247.116) [-2240.809] -- 0:01:19
Average standard deviation of split frequencies: 0.005957
901000 -- (-2252.961) (-2255.328) [-2239.160] (-2242.141) * [-2247.089] (-2236.806) (-2251.447) (-2252.058) -- 0:01:18
902000 -- (-2248.864) (-2258.010) [-2236.172] (-2251.327) * [-2228.444] (-2240.159) (-2238.011) (-2233.947) -- 0:01:18
903000 -- [-2238.410] (-2237.421) (-2246.019) (-2241.618) * [-2230.034] (-2236.700) (-2237.521) (-2264.754) -- 0:01:17
904000 -- (-2250.861) (-2245.045) [-2243.500] (-2237.520) * [-2234.966] (-2236.912) (-2239.553) (-2244.539) -- 0:01:16
905000 -- (-2239.233) (-2250.521) (-2243.202) [-2234.651] * [-2241.551] (-2247.126) (-2237.288) (-2238.686) -- 0:01:15
Average standard deviation of split frequencies: 0.005971
906000 -- (-2245.424) [-2238.376] (-2252.292) (-2242.061) * (-2260.862) [-2242.174] (-2256.205) (-2247.258) -- 0:01:14
907000 -- (-2256.052) (-2247.647) (-2235.201) [-2241.227] * [-2244.751] (-2242.946) (-2247.524) (-2255.512) -- 0:01:13
908000 -- (-2242.159) (-2264.552) [-2242.802] (-2235.826) * (-2255.379) (-2242.166) [-2232.522] (-2250.730) -- 0:01:13
909000 -- (-2258.095) (-2246.617) (-2246.722) [-2237.043] * (-2250.153) (-2240.144) [-2244.295] (-2251.082) -- 0:01:12
910000 -- (-2247.278) [-2239.370] (-2240.608) (-2263.566) * (-2257.181) [-2245.539] (-2245.013) (-2264.013) -- 0:01:11
Average standard deviation of split frequencies: 0.005990
911000 -- [-2238.850] (-2234.442) (-2239.285) (-2249.779) * (-2256.681) (-2241.729) (-2241.076) [-2237.941] -- 0:01:10
912000 -- (-2243.131) (-2238.764) [-2245.494] (-2249.477) * (-2263.217) (-2227.975) [-2246.768] (-2244.941) -- 0:01:10
913000 -- (-2246.549) (-2250.041) (-2250.255) [-2241.112] * (-2246.593) [-2238.894] (-2243.194) (-2260.964) -- 0:01:09
914000 -- (-2236.374) (-2243.584) [-2243.962] (-2242.263) * [-2239.554] (-2246.387) (-2257.845) (-2243.514) -- 0:01:08
915000 -- (-2234.843) [-2237.752] (-2256.988) (-2251.327) * (-2249.010) (-2249.449) [-2245.047] (-2262.973) -- 0:01:07
Average standard deviation of split frequencies: 0.005985
916000 -- (-2245.091) (-2240.107) (-2250.052) [-2236.040] * (-2243.135) (-2238.795) [-2246.153] (-2251.715) -- 0:01:06
917000 -- (-2245.634) (-2261.336) [-2243.069] (-2251.836) * (-2244.896) [-2236.541] (-2240.909) (-2253.290) -- 0:01:06
918000 -- (-2251.660) [-2245.080] (-2240.030) (-2241.802) * (-2254.138) (-2241.731) [-2235.007] (-2241.204) -- 0:01:05
919000 -- (-2248.053) (-2242.329) [-2240.085] (-2248.543) * (-2262.975) (-2241.392) [-2233.347] (-2244.205) -- 0:01:04
920000 -- (-2245.283) [-2234.993] (-2243.287) (-2244.747) * (-2249.807) (-2250.102) [-2240.341] (-2247.496) -- 0:01:03
Average standard deviation of split frequencies: 0.006128
921000 -- (-2248.774) (-2235.097) (-2251.768) [-2235.695] * (-2244.135) (-2248.433) (-2240.705) [-2233.755] -- 0:01:02
922000 -- (-2244.744) (-2235.791) (-2253.497) [-2243.135] * [-2239.926] (-2246.151) (-2244.825) (-2259.298) -- 0:01:02
923000 -- (-2248.768) (-2241.093) (-2248.674) [-2243.784] * (-2258.735) (-2236.855) (-2243.371) [-2236.562] -- 0:01:01
924000 -- (-2244.756) (-2240.881) (-2241.653) [-2237.077] * (-2243.751) (-2240.367) (-2244.952) [-2235.646] -- 0:01:00
925000 -- [-2239.210] (-2244.180) (-2258.873) (-2242.137) * [-2234.560] (-2235.713) (-2248.706) (-2240.748) -- 0:00:59
Average standard deviation of split frequencies: 0.006009
926000 -- (-2262.064) (-2242.703) (-2241.491) [-2233.310] * [-2234.682] (-2234.094) (-2248.627) (-2254.259) -- 0:00:58
927000 -- (-2256.685) (-2244.920) [-2232.634] (-2243.642) * (-2238.414) [-2230.671] (-2263.538) (-2248.767) -- 0:00:58
928000 -- (-2249.134) (-2243.533) (-2244.670) [-2236.868] * (-2234.446) (-2237.655) (-2256.213) [-2241.558] -- 0:00:57
929000 -- [-2239.630] (-2248.921) (-2241.390) (-2243.694) * (-2245.383) (-2241.994) (-2254.962) [-2237.570] -- 0:00:56
930000 -- (-2249.409) [-2240.433] (-2240.393) (-2235.886) * [-2227.905] (-2250.426) (-2249.037) (-2226.931) -- 0:00:55
Average standard deviation of split frequencies: 0.006095
931000 -- (-2254.026) (-2256.624) [-2246.071] (-2250.950) * (-2243.129) (-2248.848) [-2242.063] (-2245.645) -- 0:00:54
932000 -- (-2237.003) (-2245.044) [-2240.514] (-2259.425) * (-2263.028) (-2237.457) (-2232.858) [-2234.807] -- 0:00:54
933000 -- (-2232.647) (-2237.879) [-2235.086] (-2250.352) * (-2246.612) (-2235.167) [-2240.265] (-2237.199) -- 0:00:53
934000 -- (-2236.873) (-2242.859) (-2255.313) [-2238.850] * (-2259.398) (-2254.561) (-2241.345) [-2233.012] -- 0:00:52
935000 -- [-2242.533] (-2258.297) (-2257.162) (-2243.258) * (-2272.930) [-2253.766] (-2236.687) (-2253.779) -- 0:00:51
Average standard deviation of split frequencies: 0.005924
936000 -- [-2232.296] (-2246.274) (-2243.171) (-2253.451) * (-2252.244) (-2237.332) (-2235.875) [-2243.291] -- 0:00:51
937000 -- (-2239.605) [-2240.787] (-2253.504) (-2240.128) * (-2250.047) [-2238.516] (-2232.317) (-2260.816) -- 0:00:50
938000 -- (-2240.465) (-2249.085) (-2248.576) [-2255.975] * [-2226.081] (-2242.106) (-2234.166) (-2249.752) -- 0:00:49
939000 -- (-2238.870) [-2239.564] (-2245.802) (-2241.908) * [-2227.087] (-2246.817) (-2243.632) (-2240.754) -- 0:00:48
940000 -- (-2254.116) (-2255.059) [-2237.683] (-2237.089) * [-2238.018] (-2237.473) (-2253.643) (-2259.449) -- 0:00:47
Average standard deviation of split frequencies: 0.005886
941000 -- [-2236.457] (-2249.623) (-2236.543) (-2241.286) * (-2243.983) (-2240.311) [-2230.494] (-2253.357) -- 0:00:47
942000 -- [-2239.230] (-2249.968) (-2251.916) (-2241.797) * (-2234.255) (-2248.545) (-2259.719) [-2238.395] -- 0:00:46
943000 -- [-2239.592] (-2256.597) (-2248.131) (-2256.310) * [-2244.280] (-2244.823) (-2256.651) (-2241.304) -- 0:00:45
944000 -- (-2247.688) (-2263.258) [-2244.089] (-2236.870) * (-2249.952) (-2252.105) (-2250.081) [-2240.123] -- 0:00:44
945000 -- (-2240.347) (-2258.754) (-2259.006) [-2237.567] * (-2241.664) (-2265.321) (-2254.760) [-2233.278] -- 0:00:43
Average standard deviation of split frequencies: 0.005988
946000 -- (-2240.461) (-2252.934) [-2242.404] (-2235.163) * [-2243.103] (-2255.412) (-2251.970) (-2245.128) -- 0:00:43
947000 -- (-2249.091) (-2233.112) [-2234.285] (-2241.651) * (-2248.252) (-2241.495) (-2253.890) [-2236.721] -- 0:00:42
948000 -- (-2250.700) (-2257.327) (-2238.949) [-2239.144] * (-2239.996) [-2244.877] (-2269.911) (-2254.575) -- 0:00:41
949000 -- (-2258.782) (-2238.977) [-2235.006] (-2240.413) * (-2244.411) (-2247.503) [-2234.396] (-2245.621) -- 0:00:40
950000 -- (-2245.610) (-2245.483) (-2248.792) [-2238.193] * (-2242.565) (-2255.070) (-2240.311) [-2239.597] -- 0:00:39
Average standard deviation of split frequencies: 0.005769
951000 -- (-2242.771) (-2245.839) (-2253.814) [-2238.039] * (-2236.608) (-2250.973) [-2239.853] (-2244.317) -- 0:00:39
952000 -- (-2250.851) (-2256.830) (-2255.460) [-2240.156] * (-2254.127) [-2230.278] (-2238.878) (-2245.060) -- 0:00:38
953000 -- (-2239.396) [-2245.681] (-2244.698) (-2241.380) * (-2260.249) (-2247.436) [-2233.696] (-2244.816) -- 0:00:37
954000 -- (-2243.926) (-2252.422) (-2254.520) [-2238.583] * (-2238.500) (-2253.628) [-2228.093] (-2246.455) -- 0:00:36
955000 -- (-2255.526) (-2240.828) (-2253.687) [-2242.715] * (-2254.102) (-2248.827) [-2235.559] (-2241.943) -- 0:00:35
Average standard deviation of split frequencies: 0.005518
956000 -- (-2240.806) [-2230.099] (-2251.729) (-2231.583) * (-2250.896) [-2241.377] (-2245.668) (-2248.044) -- 0:00:35
957000 -- (-2238.209) (-2241.207) (-2248.909) [-2230.563] * (-2239.378) (-2260.106) (-2245.646) [-2237.177] -- 0:00:34
958000 -- [-2240.605] (-2258.144) (-2244.792) (-2241.411) * (-2244.530) (-2250.614) [-2244.977] (-2247.510) -- 0:00:33
959000 -- [-2245.830] (-2255.045) (-2243.221) (-2238.723) * (-2231.586) [-2235.664] (-2244.605) (-2256.542) -- 0:00:32
960000 -- [-2236.891] (-2248.070) (-2259.884) (-2235.849) * (-2244.846) (-2239.570) [-2229.727] (-2268.566) -- 0:00:31
Average standard deviation of split frequencies: 0.005779
961000 -- [-2244.054] (-2252.014) (-2259.480) (-2258.498) * (-2242.216) [-2235.491] (-2242.939) (-2246.511) -- 0:00:31
962000 -- (-2246.707) [-2235.647] (-2256.339) (-2250.097) * [-2231.805] (-2238.104) (-2250.513) (-2260.401) -- 0:00:30
963000 -- [-2234.933] (-2247.216) (-2259.420) (-2238.983) * (-2241.482) (-2242.975) [-2244.947] (-2261.098) -- 0:00:29
964000 -- (-2245.400) (-2260.605) (-2260.138) [-2234.271] * [-2232.956] (-2248.969) (-2257.078) (-2248.790) -- 0:00:28
965000 -- [-2232.205] (-2240.747) (-2252.186) (-2244.504) * [-2238.165] (-2241.853) (-2264.656) (-2251.687) -- 0:00:27
Average standard deviation of split frequencies: 0.005926
966000 -- (-2250.782) [-2242.839] (-2250.461) (-2239.840) * (-2252.904) [-2241.875] (-2249.517) (-2230.444) -- 0:00:27
967000 -- (-2238.312) [-2238.531] (-2248.194) (-2247.232) * (-2246.042) (-2240.566) [-2236.555] (-2237.078) -- 0:00:26
968000 -- (-2250.427) (-2246.500) [-2234.390] (-2239.713) * (-2255.420) (-2248.281) [-2248.851] (-2250.524) -- 0:00:25
969000 -- (-2243.126) [-2229.222] (-2243.249) (-2263.257) * (-2247.126) (-2242.794) [-2236.995] (-2245.313) -- 0:00:24
970000 -- (-2244.897) (-2232.875) [-2239.075] (-2247.672) * (-2251.292) (-2246.208) [-2237.245] (-2248.356) -- 0:00:23
Average standard deviation of split frequencies: 0.006028
971000 -- (-2251.537) (-2245.867) [-2233.587] (-2243.230) * (-2267.411) (-2238.933) [-2240.995] (-2235.737) -- 0:00:23
972000 -- (-2245.056) [-2248.868] (-2234.022) (-2247.348) * (-2246.400) (-2243.089) (-2266.999) [-2240.880] -- 0:00:22
973000 -- [-2232.349] (-2251.651) (-2253.330) (-2249.699) * (-2252.092) [-2229.706] (-2256.011) (-2243.074) -- 0:00:21
974000 -- (-2237.573) (-2251.905) (-2253.483) [-2236.671] * (-2253.409) [-2237.430] (-2248.202) (-2236.562) -- 0:00:20
975000 -- [-2236.225] (-2243.358) (-2260.318) (-2251.837) * (-2247.630) (-2240.895) (-2250.405) [-2229.112] -- 0:00:19
Average standard deviation of split frequencies: 0.005926
976000 -- [-2230.122] (-2246.773) (-2243.823) (-2257.354) * (-2246.003) (-2248.176) (-2246.229) [-2227.069] -- 0:00:19
977000 -- (-2234.792) (-2252.439) [-2244.207] (-2247.856) * (-2258.346) (-2259.254) [-2233.170] (-2236.186) -- 0:00:18
978000 -- (-2254.565) (-2238.031) (-2248.221) [-2239.612] * (-2261.250) (-2257.384) (-2242.745) [-2230.072] -- 0:00:17
979000 -- (-2253.629) [-2235.095] (-2242.862) (-2252.566) * (-2242.186) [-2240.958] (-2240.797) (-2248.705) -- 0:00:16
980000 -- (-2252.800) (-2261.850) [-2247.846] (-2252.841) * (-2243.089) (-2253.914) [-2235.666] (-2250.629) -- 0:00:15
Average standard deviation of split frequencies: 0.005799
981000 -- [-2237.621] (-2242.022) (-2232.699) (-2249.018) * (-2242.137) (-2252.483) (-2244.007) [-2240.258] -- 0:00:15
982000 -- (-2243.921) (-2230.108) [-2239.331] (-2250.930) * [-2232.092] (-2256.960) (-2242.139) (-2238.137) -- 0:00:14
983000 -- (-2242.224) [-2234.559] (-2243.500) (-2247.447) * [-2231.304] (-2255.124) (-2240.629) (-2254.181) -- 0:00:13
984000 -- (-2235.436) [-2237.751] (-2249.046) (-2254.867) * (-2225.312) (-2247.946) [-2246.359] (-2252.183) -- 0:00:12
985000 -- (-2239.326) [-2218.834] (-2253.705) (-2259.953) * (-2234.829) (-2247.729) [-2245.058] (-2260.099) -- 0:00:11
Average standard deviation of split frequencies: 0.005601
986000 -- [-2249.783] (-2237.066) (-2259.808) (-2269.754) * (-2243.904) (-2252.724) (-2263.792) [-2239.169] -- 0:00:11
987000 -- (-2238.538) [-2232.528] (-2248.073) (-2258.239) * (-2236.533) (-2240.656) (-2263.118) [-2239.724] -- 0:00:10
988000 -- (-2243.619) (-2231.217) [-2245.702] (-2275.455) * [-2244.131] (-2234.375) (-2248.565) (-2253.893) -- 0:00:09
989000 -- [-2240.796] (-2245.650) (-2253.715) (-2271.973) * (-2261.885) [-2238.952] (-2242.459) (-2242.748) -- 0:00:08
990000 -- [-2243.266] (-2235.606) (-2239.250) (-2266.394) * (-2253.034) (-2244.637) (-2244.412) [-2236.005] -- 0:00:07
Average standard deviation of split frequencies: 0.005695
991000 -- (-2251.191) [-2235.679] (-2243.385) (-2246.119) * (-2256.802) [-2236.715] (-2245.211) (-2248.694) -- 0:00:07
992000 -- (-2240.227) [-2237.501] (-2244.462) (-2262.982) * (-2255.099) (-2247.808) [-2246.062] (-2247.505) -- 0:00:06
993000 -- (-2267.249) [-2233.999] (-2237.054) (-2261.069) * (-2245.819) (-2244.472) [-2249.746] (-2247.591) -- 0:00:05
994000 -- (-2243.674) (-2247.688) (-2269.337) [-2243.895] * [-2241.939] (-2250.895) (-2248.861) (-2238.996) -- 0:00:04
995000 -- (-2252.893) (-2239.670) (-2246.848) [-2247.406] * (-2247.241) (-2256.108) (-2247.658) [-2233.455] -- 0:00:03
Average standard deviation of split frequencies: 0.005875
996000 -- (-2243.128) [-2241.024] (-2258.437) (-2253.550) * (-2249.319) (-2270.843) (-2239.567) [-2243.193] -- 0:00:03
997000 -- [-2243.094] (-2247.538) (-2256.185) (-2256.694) * (-2255.057) (-2256.841) (-2241.655) [-2237.094] -- 0:00:02
998000 -- (-2238.806) (-2252.381) [-2241.593] (-2250.906) * (-2270.892) (-2262.473) (-2241.475) [-2235.004] -- 0:00:01
999000 -- (-2253.313) [-2236.462] (-2240.371) (-2257.097) * (-2248.678) (-2243.316) [-2235.518] (-2254.470) -- 0:00:00
1000000 -- (-2250.720) (-2256.396) [-2235.238] (-2254.538) * (-2250.941) [-2242.721] (-2243.522) (-2266.655) -- 0:00:00
Average standard deviation of split frequencies: 0.005997
Analysis completed in 13 mins 16 seconds
Analysis used 794.01 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -2217.99
Likelihood of best state for "cold" chain of run 2 was -2217.99
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
53.7 % ( 42 %) Dirichlet(Revmat{all})
75.1 % ( 65 %) Slider(Revmat{all})
22.8 % ( 34 %) Dirichlet(Pi{all})
26.1 % ( 22 %) Slider(Pi{all})
76.1 % ( 53 %) Multiplier(Alpha{1,2})
64.6 % ( 43 %) Multiplier(Alpha{3})
62.5 % ( 35 %) Slider(Pinvar{all})
64.0 % ( 63 %) ExtSPR(Tau{all},V{all})
53.4 % ( 55 %) ExtTBR(Tau{all},V{all})
68.4 % ( 70 %) NNI(Tau{all},V{all})
49.1 % ( 53 %) ParsSPR(Tau{all},V{all})
27.4 % ( 27 %) Multiplier(V{all})
74.6 % ( 82 %) Nodeslider(V{all})
26.3 % ( 26 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
52.9 % ( 45 %) Dirichlet(Revmat{all})
76.6 % ( 68 %) Slider(Revmat{all})
22.1 % ( 27 %) Dirichlet(Pi{all})
26.4 % ( 29 %) Slider(Pi{all})
75.4 % ( 50 %) Multiplier(Alpha{1,2})
64.7 % ( 42 %) Multiplier(Alpha{3})
62.3 % ( 38 %) Slider(Pinvar{all})
64.2 % ( 62 %) ExtSPR(Tau{all},V{all})
53.7 % ( 55 %) ExtTBR(Tau{all},V{all})
68.3 % ( 57 %) NNI(Tau{all},V{all})
49.1 % ( 47 %) ParsSPR(Tau{all},V{all})
27.5 % ( 28 %) Multiplier(V{all})
74.8 % ( 76 %) Nodeslider(V{all})
26.2 % ( 27 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.43 0.12 0.02
2 | 166763 0.45 0.14
3 | 166472 166462 0.47
4 | 166418 166632 167253
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.42 0.12 0.02
2 | 166719 0.45 0.14
3 | 166309 166514 0.47
4 | 167030 166761 166667
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -2235.77
| 2 2 2 |
| 1 2 1 2 |
| 2 1 1 * 2 2 |
| 1 1 2 1 2 |
| 2 1 2 1 21 1 |
| 2 1 2 12 2 2 2 2 1 2 2 1 1 1 1 2 2 2 1 |
| * 1 2 21*2 1 2 2 1 1 |
| 1 12 1 1 2 1 1 1 |
| 21 2 21 * 1 22 1 12 1|
|1 1 2 1 1 1 2 21 112 221 |
| * 2 2 1 2|
| 1 1 2 1 2 1 |
|2 2 1 1 2 2 |
| 1 |
| 2 * |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -2242.18
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2225.78 -2253.49
2 -2229.58 -2253.56
--------------------------------------
TOTAL -2226.45 -2253.53
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.041196 0.000056 0.027599 0.056936 0.040550 1494.98 1497.99 1.000
r(A<->C){all} 0.028858 0.000791 0.000006 0.084137 0.020100 412.99 418.30 1.000
r(A<->G){all} 0.239074 0.004931 0.115442 0.377927 0.233947 526.28 557.61 1.000
r(A<->T){all} 0.022952 0.000193 0.002189 0.050164 0.020124 562.50 686.86 1.000
r(C<->G){all} 0.038428 0.001379 0.000006 0.114897 0.027713 300.07 391.13 1.000
r(C<->T){all} 0.650120 0.006057 0.500457 0.795281 0.652423 541.54 554.59 1.000
r(G<->T){all} 0.020567 0.000231 0.000024 0.050875 0.016857 624.73 652.01 1.000
pi(A){all} 0.253071 0.000120 0.231308 0.273528 0.253068 863.17 977.66 1.000
pi(C){all} 0.115857 0.000067 0.099384 0.131177 0.115685 1164.34 1178.39 1.000
pi(G){all} 0.183726 0.000098 0.164239 0.202783 0.183637 826.93 888.72 1.000
pi(T){all} 0.447346 0.000162 0.422969 0.472522 0.447531 735.77 824.30 1.000
alpha{1,2} 0.124593 0.029417 0.000011 0.344377 0.085677 1014.46 1094.47 1.000
alpha{3} 2.284749 1.699733 0.319334 4.962356 2.006349 941.56 1094.01 1.000
pinvar{all} 0.739602 0.008891 0.551677 0.881567 0.756660 595.88 776.86 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C11
4 -- C12
5 -- C14
6 -- C15
7 -- C16
8 -- C18
9 -- C19
10 -- C2
11 -- C21
12 -- C22
13 -- C23
14 -- C24
15 -- C25
16 -- C26
17 -- C28
18 -- C30
19 -- C31
20 -- C33
21 -- C34
22 -- C35
23 -- C37
24 -- C38
25 -- C4
26 -- C5
27 -- C6
28 -- C7
29 -- C8
30 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------------------------
1 -- .*****************************
2 -- .*............................
3 -- ..*...........................
4 -- ...*..........................
5 -- ....*.........................
6 -- .....*........................
7 -- ......*.......................
8 -- .......*......................
9 -- ........*.....................
10 -- .........*....................
11 -- ..........*...................
12 -- ...........*..................
13 -- ............*.................
14 -- .............*................
15 -- ..............*...............
16 -- ...............*..............
17 -- ................*.............
18 -- .................*............
19 -- ..................*...........
20 -- ...................*..........
21 -- ....................*.........
22 -- .....................*........
23 -- ......................*.......
24 -- .......................*......
25 -- ........................*.....
26 -- .........................*....
27 -- ..........................*...
28 -- ...........................*..
29 -- ............................*.
30 -- .............................*
31 -- ......................**......
32 -- ..........**..**..*...........
33 -- .********.********************
34 -- ...*.............*...***......
35 -- .*****....**..**.**..********.
36 -- ...*.............*....**......
37 -- .******.*.**..**.************.
38 -- .**.**..................*****.
39 -- ...*......**..**.**..***......
40 -- ...*..................**......
41 -- .................*....**......
42 -- ...*.............*............
43 -- ......*.*..........**.........
44 -- .*****...........*...********.
45 -- ........*..........*..........
46 -- ......*.*.....................
47 -- ..........*...**..*...........
48 -- ......*.............*.........
49 -- ...............*..*...........
50 -- ..........*...*...............
51 -- ..........*....*..............
52 -- ..........**..*...*...........
53 -- ..........*.......*...........
54 -- ..........**..................
55 -- ..............*...*...........
56 -- ...........*......*...........
57 -- ..............**..............
58 -- ...........*..*...............
59 -- ..........**..**..............
60 -- ...................**.........
61 -- ......*............*..........
62 -- ..........**...*..*...........
63 -- ........*...........*.........
64 -- .******.*.**.***.************.
65 -- .******.*.**..**.**.*********.
66 -- .******...**..**.**..********.
67 -- .*****....**..**.**.*********.
68 -- .*****....**..**.***.********.
69 -- ...........*...*..............
70 -- .******.*.**..**.***.********.
71 -- ...........*..**..*...........
72 -- .*****..*.**..**.************.
73 -- ................*............*
74 -- .*****..*.**..**.**..********.
75 -- .******...**..**.************.
76 -- ............*...*.............
77 -- .......*....*.................
78 -- .******.*.********************
79 -- .********.*******************.
80 -- ............*................*
81 -- .......*........*.............
82 -- .**.**....**..**..*.....*****.
83 -- .********.**.*****************
84 -- .********.******.*************
85 -- .......*.....................*
86 -- .............*...............*
87 -- ............**................
88 -- .********.***.****************
89 -- .********.**..**.************.
90 -- .......*....**..*............*
91 -- .......*.....*................
92 -- .******.*.***.**.************.
93 -- .******.*.**..***************.
------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 3002 1.000000 0.000000 1.000000 1.000000 2
33 3001 0.999667 0.000471 0.999334 1.000000 2
34 3001 0.999667 0.000471 0.999334 1.000000 2
35 2987 0.995003 0.000471 0.994670 0.995336 2
36 2827 0.941706 0.015546 0.930713 0.952698 2
37 2645 0.881079 0.001413 0.880080 0.882079 2
38 2380 0.792805 0.007537 0.787475 0.798135 2
39 1985 0.661226 0.009893 0.654231 0.668221 2
40 1135 0.378081 0.009893 0.371086 0.385077 2
41 882 0.293804 0.016017 0.282478 0.305130 2
42 872 0.290473 0.002827 0.288474 0.292472 2
43 621 0.206862 0.011777 0.198534 0.215190 2
44 514 0.171219 0.013191 0.161892 0.180546 2
45 476 0.158561 0.007537 0.153231 0.163891 2
46 461 0.153564 0.008009 0.147901 0.159227 2
47 458 0.152565 0.000000 0.152565 0.152565 2
48 457 0.152232 0.003298 0.149900 0.154564 2
49 449 0.149567 0.002355 0.147901 0.151233 2
50 448 0.149234 0.006595 0.144570 0.153897 2
51 446 0.148568 0.006595 0.143904 0.153231 2
52 441 0.146902 0.001413 0.145903 0.147901 2
53 438 0.145903 0.006595 0.141239 0.150566 2
54 436 0.145237 0.010364 0.137908 0.152565 2
55 435 0.144903 0.016488 0.133245 0.156562 2
56 429 0.142905 0.010835 0.135243 0.150566 2
57 429 0.142905 0.003298 0.140573 0.145237 2
58 424 0.141239 0.008480 0.135243 0.147235 2
59 422 0.140573 0.001884 0.139241 0.141905 2
60 421 0.140240 0.007066 0.135243 0.145237 2
61 417 0.138907 0.005182 0.135243 0.142572 2
62 413 0.137575 0.006124 0.133245 0.141905 2
63 412 0.137242 0.003769 0.134577 0.139907 2
64 411 0.136909 0.000471 0.136576 0.137242 2
65 401 0.133578 0.003298 0.131246 0.135909 2
66 400 0.133245 0.000942 0.132578 0.133911 2
67 395 0.131579 0.008009 0.125916 0.137242 2
68 394 0.131246 0.002827 0.129247 0.133245 2
69 393 0.130913 0.004240 0.127915 0.133911 2
70 388 0.129247 0.002827 0.127249 0.131246 2
71 387 0.128914 0.002355 0.127249 0.130580 2
72 387 0.128914 0.011777 0.120586 0.137242 2
73 374 0.124584 0.001884 0.123251 0.125916 2
74 370 0.123251 0.019786 0.109260 0.137242 2
75 367 0.122252 0.005182 0.118588 0.125916 2
76 365 0.121586 0.008009 0.115923 0.127249 2
77 356 0.118588 0.006595 0.113924 0.123251 2
78 347 0.115590 0.005182 0.111925 0.119254 2
79 334 0.111259 0.008480 0.105263 0.117255 2
80 330 0.109927 0.013191 0.100600 0.119254 2
81 325 0.108261 0.001413 0.107262 0.109260 2
82 324 0.107928 0.005653 0.103931 0.111925 2
83 320 0.106596 0.000942 0.105929 0.107262 2
84 316 0.105263 0.010364 0.097935 0.112592 2
85 312 0.103931 0.007537 0.098601 0.109260 2
86 312 0.103931 0.001884 0.102598 0.105263 2
87 308 0.102598 0.001884 0.101266 0.103931 2
88 303 0.100933 0.001413 0.099933 0.101932 2
89 300 0.099933 0.006595 0.095270 0.104597 2
90 294 0.097935 0.007537 0.092605 0.103264 2
91 292 0.097268 0.006595 0.092605 0.101932 2
92 291 0.096935 0.006124 0.092605 0.101266 2
93 288 0.095936 0.009422 0.089274 0.102598 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.000386 0.000000 0.000000 0.001154 0.000264 1.000 2
length{all}[2] 0.000384 0.000000 0.000000 0.001186 0.000266 1.000 2
length{all}[3] 0.000395 0.000000 0.000000 0.001154 0.000268 1.000 2
length{all}[4] 0.001111 0.000000 0.000141 0.002489 0.000977 1.000 2
length{all}[5] 0.000381 0.000000 0.000000 0.001191 0.000256 1.000 2
length{all}[6] 0.000380 0.000000 0.000000 0.001105 0.000259 1.000 2
length{all}[7] 0.000387 0.000000 0.000000 0.001205 0.000263 1.000 2
length{all}[8] 0.000745 0.000000 0.000005 0.001788 0.000611 1.000 2
length{all}[9] 0.000375 0.000000 0.000001 0.001153 0.000252 1.000 2
length{all}[10] 0.000372 0.000000 0.000000 0.001183 0.000252 1.000 2
length{all}[11] 0.000380 0.000000 0.000000 0.001179 0.000257 1.000 2
length{all}[12] 0.000361 0.000000 0.000000 0.001107 0.000242 1.000 2
length{all}[13] 0.000390 0.000000 0.000000 0.001202 0.000262 1.000 2
length{all}[14] 0.001080 0.000000 0.000000 0.002361 0.000951 1.000 2
length{all}[15] 0.000379 0.000000 0.000000 0.001157 0.000256 1.000 2
length{all}[16] 0.000376 0.000000 0.000000 0.001163 0.000255 1.000 2
length{all}[17] 0.000377 0.000000 0.000000 0.001142 0.000256 1.000 2
length{all}[18] 0.001071 0.000000 0.000033 0.002412 0.000943 1.000 2
length{all}[19] 0.000370 0.000000 0.000000 0.001114 0.000246 1.000 2
length{all}[20] 0.000769 0.000000 0.000030 0.001862 0.000647 1.000 2
length{all}[21] 0.000387 0.000000 0.000000 0.001158 0.000272 1.000 2
length{all}[22] 0.002465 0.000001 0.000553 0.004667 0.002328 1.000 2
length{all}[23] 0.000381 0.000000 0.000000 0.001126 0.000261 1.000 2
length{all}[24] 0.000372 0.000000 0.000000 0.001150 0.000244 1.000 2
length{all}[25] 0.000385 0.000000 0.000000 0.001163 0.000263 1.001 2
length{all}[26] 0.000390 0.000000 0.000000 0.001163 0.000275 1.000 2
length{all}[27] 0.000782 0.000000 0.000026 0.001969 0.000639 1.000 2
length{all}[28] 0.000393 0.000000 0.000000 0.001181 0.000274 1.000 2
length{all}[29] 0.000390 0.000000 0.000000 0.001162 0.000264 1.001 2
length{all}[30] 0.000779 0.000000 0.000035 0.001859 0.000652 1.000 2
length{all}[31] 0.001149 0.000000 0.000112 0.002537 0.001004 1.001 2
length{all}[32] 0.006906 0.000004 0.003082 0.011040 0.006663 1.001 2
length{all}[33] 0.001140 0.000000 0.000082 0.002487 0.000991 1.000 2
length{all}[34] 0.002377 0.000001 0.000433 0.004677 0.002163 1.000 2
length{all}[35] 0.001306 0.000001 0.000107 0.002851 0.001135 1.000 2
length{all}[36] 0.001554 0.000001 0.000105 0.003366 0.001396 1.005 2
length{all}[37] 0.000763 0.000000 0.000016 0.001842 0.000627 1.000 2
length{all}[38] 0.001115 0.000001 0.000009 0.002456 0.000974 1.000 2
length{all}[39] 0.000919 0.000001 0.000000 0.002332 0.000757 1.000 2
length{all}[40] 0.000492 0.000000 0.000000 0.001501 0.000337 0.999 2
length{all}[41] 0.000403 0.000000 0.000001 0.001202 0.000269 1.000 2
length{all}[42] 0.000397 0.000000 0.000000 0.001298 0.000257 1.002 2
length{all}[43] 0.000536 0.000000 0.000001 0.001638 0.000378 0.999 2
length{all}[44] 0.000748 0.000000 0.000006 0.001890 0.000566 0.998 2
length{all}[45] 0.000393 0.000000 0.000001 0.001136 0.000284 1.004 2
length{all}[46] 0.000390 0.000000 0.000001 0.001152 0.000263 1.000 2
length{all}[47] 0.000382 0.000000 0.000000 0.001147 0.000249 0.998 2
length{all}[48] 0.000396 0.000000 0.000001 0.001177 0.000284 1.000 2
length{all}[49] 0.000380 0.000000 0.000001 0.001131 0.000257 0.999 2
length{all}[50] 0.000354 0.000000 0.000001 0.001061 0.000255 0.999 2
length{all}[51] 0.000375 0.000000 0.000000 0.001096 0.000256 1.000 2
length{all}[52] 0.000378 0.000000 0.000001 0.001063 0.000261 0.999 2
length{all}[53] 0.000379 0.000000 0.000001 0.001157 0.000266 1.001 2
length{all}[54] 0.000366 0.000000 0.000001 0.001081 0.000249 1.000 2
length{all}[55] 0.000361 0.000000 0.000000 0.001053 0.000247 0.998 2
length{all}[56] 0.000357 0.000000 0.000002 0.001082 0.000243 0.998 2
length{all}[57] 0.000371 0.000000 0.000000 0.001197 0.000246 0.999 2
length{all}[58] 0.000394 0.000000 0.000004 0.001223 0.000257 0.999 2
length{all}[59] 0.000367 0.000000 0.000002 0.001164 0.000264 1.003 2
length{all}[60] 0.000376 0.000000 0.000001 0.001127 0.000243 0.998 2
length{all}[61] 0.000349 0.000000 0.000002 0.001079 0.000224 1.001 2
length{all}[62] 0.000380 0.000000 0.000000 0.001069 0.000301 0.998 2
length{all}[63] 0.000389 0.000000 0.000000 0.001214 0.000262 1.004 2
length{all}[64] 0.000426 0.000000 0.000001 0.001326 0.000285 0.998 2
length{all}[65] 0.000386 0.000000 0.000001 0.001129 0.000301 1.001 2
length{all}[66] 0.000383 0.000000 0.000001 0.001099 0.000274 1.002 2
length{all}[67] 0.000362 0.000000 0.000001 0.001074 0.000248 0.998 2
length{all}[68] 0.000406 0.000000 0.000000 0.001223 0.000285 0.998 2
length{all}[69] 0.000368 0.000000 0.000002 0.001055 0.000253 1.000 2
length{all}[70] 0.000396 0.000000 0.000000 0.001150 0.000266 0.997 2
length{all}[71] 0.000412 0.000000 0.000001 0.001163 0.000287 0.997 2
length{all}[72] 0.000408 0.000000 0.000002 0.001228 0.000279 0.999 2
length{all}[73] 0.000381 0.000000 0.000000 0.001180 0.000251 0.999 2
length{all}[74] 0.000381 0.000000 0.000001 0.001090 0.000267 1.003 2
length{all}[75] 0.000411 0.000000 0.000001 0.001157 0.000300 0.997 2
length{all}[76] 0.000384 0.000000 0.000001 0.001113 0.000261 1.002 2
length{all}[77] 0.000370 0.000000 0.000001 0.001174 0.000235 0.997 2
length{all}[78] 0.000395 0.000000 0.000000 0.001197 0.000265 0.997 2
length{all}[79] 0.000392 0.000000 0.000006 0.001216 0.000237 0.997 2
length{all}[80] 0.000402 0.000000 0.000001 0.001125 0.000287 0.997 2
length{all}[81] 0.000417 0.000000 0.000005 0.001301 0.000295 0.997 2
length{all}[82] 0.000526 0.000000 0.000001 0.001595 0.000370 0.997 2
length{all}[83] 0.000387 0.000000 0.000001 0.001075 0.000277 1.001 2
length{all}[84] 0.000374 0.000000 0.000001 0.001051 0.000277 0.997 2
length{all}[85] 0.000402 0.000000 0.000001 0.001303 0.000235 0.997 2
length{all}[86] 0.000418 0.000000 0.000004 0.001277 0.000300 1.002 2
length{all}[87] 0.000380 0.000000 0.000002 0.001182 0.000258 0.998 2
length{all}[88] 0.000379 0.000000 0.000002 0.001128 0.000234 0.997 2
length{all}[89] 0.000431 0.000000 0.000001 0.001272 0.000264 0.997 2
length{all}[90] 0.000366 0.000000 0.000001 0.000993 0.000285 1.011 2
length{all}[91] 0.000393 0.000000 0.000003 0.001118 0.000273 0.999 2
length{all}[92] 0.000398 0.000000 0.000003 0.001117 0.000287 0.997 2
length{all}[93] 0.000379 0.000000 0.000000 0.001173 0.000248 0.999 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.005997
Maximum standard deviation of split frequencies = 0.019786
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.011
Clade credibility values:
/---------------------------------------------------------------------- C1 (1)
|
|---------------------------------------------------------------------- C2 (10)
|
| /--------- C10 (2)
| |
| |--------- C11 (3)
| |
| |--------- C14 (5)
| |
| |--------- C15 (6)
| |
| /----------------79----------------+--------- C4 (25)
| | |
| | |--------- C5 (26)
| | |
| | |--------- C6 (27)
| | |
| | |--------- C7 (28)
| | |
| | \--------- C8 (29)
| |
| /--100--+ /----------------- C12 (4)
| | | |
+ | | |----------------- C30 (18)
| | | /---94---+
| | | | | /--------- C37 (23)
| | | | \--100--+
| | | /---100--+ \--------- C38 (24)
| | | | |
| | | | \-------------------------- C35 (22)
| | | |
| | \---66---+ /--------- C21 (11)
| | | |
| | | |--------- C22 (12)
| /---88---+ | |
| | | \-----------100-----------+--------- C25 (15)
| | | |
| | | |--------- C26 (16)
| | | |
| | | \--------- C31 (19)
| | |
| | |---------------------------------------------------- C16 (7)
| | |
| | |---------------------------------------------------- C19 (9)
| | |
| | |---------------------------------------------------- C33 (20)
\---100--+ |
| \---------------------------------------------------- C34 (21)
|
|------------------------------------------------------------- C18 (8)
|
|------------------------------------------------------------- C23 (13)
|
|------------------------------------------------------------- C24 (14)
|
|------------------------------------------------------------- C28 (17)
|
\------------------------------------------------------------- C9 (30)
Phylogram (based on average branch lengths):
/-- C1 (1)
|
|-- C2 (10)
|
| /-- C10 (2)
| |
| |-- C11 (3)
| |
| |-- C14 (5)
| |
| |-- C15 (6)
| |
| /------+-- C4 (25)
| | |
| | |-- C5 (26)
| | |
| | |---- C6 (27)
| | |
| | |-- C7 (28)
| | |
| | \-- C8 (29)
| |
| /------+ /------- C12 (4)
| | | |
+ | | |------- C30 (18)
| | | /--------+
| | | | | /-- C37 (23)
| | | | \------+
| | | /-------------+ \-- C38 (24)
| | | | |
| | | | \---------------- C35 (22)
| | | |
| | \-----+ /-- C21 (11)
| | | |
| | | |-- C22 (12)
| /---+ | |
| | | \-------------------------------------------+-- C25 (15)
| | | |
| | | |-- C26 (16)
| | | |
| | | \-- C31 (19)
| | |
| | |-- C16 (7)
| | |
| | |-- C19 (9)
| | |
| | |---- C33 (20)
\------+ |
| \-- C34 (21)
|
|---- C18 (8)
|
|- C23 (13)
|
|------ C24 (14)
|
|- C28 (17)
|
\---- C9 (30)
|------------| 0.002 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Wed Nov 23 21:54:13 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.18 sec, SCORE=1000, Nseq=38, Len=496
C1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C2 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C3 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C4 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C5 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C6 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C7 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C8 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C9 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C10 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C11 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C12 VVLSNLLYILFFISLTCFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C13 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C14 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C15 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C16 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C17 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C18 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C19 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C20 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C21 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C22 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C23 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C24 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C25 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C26 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C27 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C28 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C29 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C30 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C31 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C32 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C33 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C34 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C35 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C36 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C37 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
C38 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGV
************:** **********************************
C1 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C2 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C3 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C4 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C5 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C6 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C7 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C8 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C9 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C10 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C11 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C12 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C13 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C14 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C15 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C16 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C17 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C18 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C19 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C20 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C21 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C22 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C23 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C24 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C25 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C26 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C27 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C28 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C29 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C30 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C31 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C32 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C33 VRDISVNDLCFANKFFQFNQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C34 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C35 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C36 VRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGS
C37 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
C38 VRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGS
******************:*********.*********************
C1 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C2 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C3 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C4 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C5 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C6 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C7 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C8 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C9 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C10 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C11 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C12 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C13 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C14 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C15 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C16 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C17 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C18 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C19 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C20 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C21 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C22 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C23 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C24 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C25 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C26 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C27 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C28 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C29 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C30 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C31 TMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C32 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C33 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C34 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C35 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C36 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C37 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
C38 TMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVL
***********:**************************************
C1 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C2 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C3 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C4 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C5 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C6 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C7 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C8 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C9 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C10 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C11 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C12 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C13 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C14 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C15 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C16 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C17 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C18 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C19 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C20 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C21 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C22 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C23 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C24 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C25 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C26 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C27 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C28 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C29 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLADSNGFIRF
C30 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C31 SSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C32 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C33 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C34 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C35 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C36 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C37 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
C38 SSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRF
*******************:**********************:*******
C1 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C2 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C3 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C4 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C5 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C6 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSV
C7 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C8 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C9 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C10 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C11 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C12 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C13 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C14 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C15 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C16 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C17 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C18 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C19 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C20 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C21 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C22 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C23 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C24 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C25 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C26 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C27 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C28 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C29 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C30 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C31 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C32 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C33 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C34 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C35 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C36 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C37 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
C38 PDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSM
*************************************************:
C1 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C2 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C3 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C4 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C5 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C6 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C7 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C8 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C9 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C10 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C11 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C12 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C13 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C14 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C15 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C16 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C17 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C18 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C19 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C20 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C21 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C22 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C23 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C24 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C25 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C26 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C27 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C28 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C29 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C30 PGTFCGRDLFDLFYQFLSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C31 PGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C32 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C33 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C34 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C35 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C36 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C37 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
C38 PGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
********:*******:*********************************
C1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C2 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C3 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C4 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C5 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C6 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C7 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C8 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C9 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C10 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C11 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C12 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C13 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C14 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C15 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C16 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C17 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C18 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C19 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C20 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C21 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C22 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C23 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C24 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C25 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C26 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C27 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C28 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C29 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C30 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C31 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C32 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C33 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C34 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C35 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C36 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTL
C37 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
C38 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTL
******************:*******************************
C1 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C2 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C3 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C4 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C5 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C6 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C7 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C8 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C9 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C10 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C11 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C12 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C13 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C14 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C15 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C16 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C17 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C18 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C19 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C20 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C21 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C22 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C23 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C24 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C25 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C26 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C27 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C28 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C29 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C30 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C31 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C32 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C33 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C34 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C35 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C36 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C37 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
C38 YFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIG
**************************************************
C1 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C2 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C3 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C4 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C5 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C6 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C7 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C8 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C9 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C10 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C11 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C12 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C13 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C14 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C15 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C16 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C17 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C18 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C19 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C20 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C21 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C22 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C23 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C24 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C25 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C26 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C27 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C28 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C29 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C30 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C31 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C32 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C33 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C34 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C35 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C36 VNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C37 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
C38 VNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYS
****.*********************************************
C1 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C2 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C3 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C4 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C5 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C6 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C7 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C8 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C9 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C10 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C11 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C12 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C13 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C14 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C15 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C16 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C17 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C18 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C19 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C20 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C21 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C22 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C23 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C24 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C25 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C26 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C27 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C28 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C29 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C30 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C31 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C32 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C33 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C34 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C35 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C36 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C37 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
C38 GKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
**********************************************
-- Starting log on Thu Nov 24 00:51:54 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result/original_alignment/codeml,BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C14 1488 sites
reading seq# 2 C19 1488 sites
reading seq# 3 C11 1488 sites
reading seq# 4 C24 1488 sites
reading seq# 5 C9 1488 sites
reading seq# 6 C15 1488 sites
reading seq# 7 C30 1488 sites
reading seq# 8 C5 1488 sites
reading seq# 9 C2 1488 sites
reading seq#10 C33 1488 sites
reading seq#11 C38 1488 sites
reading seq#12 C22 1488 sites
reading seq#13 C18 1488 sites
reading seq#14 C16 1488 sites
reading seq#15 C12 1488 sites
reading seq#16 C7 1488 sites
reading seq#17 C8 1488 sites
reading seq#18 C35 1488 sites
reading seq#19 C10 1488 sites
reading seq#20 C37 1488 sites
reading seq#21 C23 1488 sites
reading seq#22 C21 1488 sites
reading seq#23 C26 1488 sites
reading seq#24 C1 1488 sites
reading seq#25 C28 1488 sites
reading seq#26 C31 1488 sites
reading seq#27 C6 1488 sites
reading seq#28 C25 1488 sites
reading seq#29 C34 1488 sites
reading seq#30 C4 1488 sitesns = 30 ls = 1488
Reading sequences, sequential format..
Reading seq # 1: C14
Reading seq # 2: C19
Reading seq # 3: C11
Reading seq # 4: C24
Reading seq # 5: C9
Reading seq # 6: C15
Reading seq # 7: C30
Reading seq # 8: C5
Reading seq # 9: C2
Reading seq #10: C33
Reading seq #11: C38
Reading seq #12: C22
Reading seq #13: C18
Reading seq #14: C16
Reading seq #15: C12
Reading seq #16: C7
Reading seq #17: C8
Reading seq #18: C35
Reading seq #19: C10
Reading seq #20: C37
Reading seq #21: C23
Reading seq #22: C21
Reading seq #23: C26
Reading seq #24: C1
Reading seq #25: C28
Reading seq #26: C31
Reading seq #27: C6
Reading seq #28: C25
Reading seq #29: C34
Reading seq #30: C4
Sequences read..
Counting site patterns.. 0:00
Compressing, 87 patterns at 496 / 496 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 87 patterns at 496 / 496 sites (100.0%), 0:00
Counting codons..
3480 bytes for distance
84912 bytes for conP
7656 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(24, 9, ((((19, 3, 1, 6, 30, 8, 27, 16, 17), (((15, 7, (20, 11)), 18), (22, 12, 28, 23, 26))), 14, 2, 10, 29), 13, 21, 4, 25, 5)); MP score: 48
424560 bytes for conP, adjusted
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
34
0.061633 0.080061 0.070438 0.015161 0.040912 0.050922 0.044436 0.088478 0.093227 0.095192 0.057045 0.043736 0.053661 0.100210 0.019983 0.014568 0.028885 0.053236 0.049075 0.015250 0.020664 0.083342 0.056069 0.023755 0.043406 0.057110 0.046206 0.020955 0.027937 0.026573 0.101255 0.021912 0.078699 0.102843 0.102671 0.010203 0.026551 0.103859 0.024582 0.300000 0.704791 0.521824
ntime & nrate & np: 39 2 42
Bounds (np=42):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 7.814663
np = 42
lnL0 = -3019.231167
Iterating by ming2
Initial: fx= 3019.231167
x= 0.06163 0.08006 0.07044 0.01516 0.04091 0.05092 0.04444 0.08848 0.09323 0.09519 0.05704 0.04374 0.05366 0.10021 0.01998 0.01457 0.02888 0.05324 0.04908 0.01525 0.02066 0.08334 0.05607 0.02375 0.04341 0.05711 0.04621 0.02095 0.02794 0.02657 0.10126 0.02191 0.07870 0.10284 0.10267 0.01020 0.02655 0.10386 0.02458 0.30000 0.70479 0.52182
1 h-m-p 0.0000 0.0000 2452.1976 ++ 2875.238424 m 0.0000 47 | 1/42
2 h-m-p 0.0000 0.0000 23341.2261 ++ 2756.500793 m 0.0000 92 | 2/42
3 h-m-p 0.0000 0.0000 2587145.8129 ++ 2744.424188 m 0.0000 137 | 3/42
4 h-m-p 0.0000 0.0000 27051.2202 ++ 2734.942342 m 0.0000 182 | 4/42
5 h-m-p 0.0000 0.0000 18925.1858 ++ 2687.012571 m 0.0000 227 | 5/42
6 h-m-p 0.0000 0.0000 12075.6578 ++ 2675.155317 m 0.0000 272 | 6/42
7 h-m-p 0.0000 0.0000 13773.7307 ++ 2554.338646 m 0.0000 317 | 7/42
8 h-m-p 0.0000 0.0000 51770.3843 ++ 2549.199361 m 0.0000 362 | 8/42
9 h-m-p 0.0000 0.0000 44672.4370 ++ 2537.185323 m 0.0000 407 | 9/42
10 h-m-p 0.0000 0.0000 30539.3977 ++ 2480.847327 m 0.0000 452 | 10/42
11 h-m-p 0.0000 0.0000 35572.4951 ++ 2468.657988 m 0.0000 497 | 11/42
12 h-m-p 0.0000 0.0000 12970.7958 ++ 2468.542554 m 0.0000 542 | 12/42
13 h-m-p 0.0000 0.0000 4483.6907 ++ 2445.276310 m 0.0000 587 | 13/42
14 h-m-p 0.0000 0.0000 31808.4093 ++ 2360.867570 m 0.0000 632 | 14/42
15 h-m-p 0.0000 0.0000 2607.6925 ++ 2345.796385 m 0.0000 677 | 15/42
16 h-m-p 0.0000 0.0000 2249.9562 ++ 2323.946503 m 0.0000 722 | 16/42
17 h-m-p 0.0000 0.0000 3893.9311 ++ 2307.436616 m 0.0000 767 | 17/42
18 h-m-p 0.0000 0.0000 29176.0503 ++ 2301.824129 m 0.0000 812 | 18/42
19 h-m-p 0.0000 0.0000 27042.5284 ++ 2290.618120 m 0.0000 857 | 19/42
20 h-m-p 0.0000 0.0000 8256.0607 ++ 2289.122735 m 0.0000 902 | 20/42
21 h-m-p 0.0000 0.0000 5453.7992 ++ 2286.868820 m 0.0000 947 | 21/42
22 h-m-p 0.0000 0.0000 2550.4055 ++ 2286.165118 m 0.0000 992 | 22/42
23 h-m-p 0.0000 0.0004 161.8765 +++ 2273.823039 m 0.0004 1038 | 22/42
24 h-m-p 0.0000 0.0000 262.7391 +YYCYCYC 2269.469230 6 0.0000 1092 | 22/42
25 h-m-p 0.0000 0.0000 1582.6559 +YYCYYYYY 2255.649301 7 0.0000 1146 | 22/42
26 h-m-p 0.0000 0.0001 656.1547 +YYCCYYC 2239.841166 6 0.0001 1201 | 22/42
27 h-m-p 0.0002 0.0011 225.2448 ++ 2209.709775 m 0.0011 1246 | 23/42
28 h-m-p 0.0001 0.0006 224.6789 +YYCYCCC 2194.229628 6 0.0005 1301 | 23/42
29 h-m-p 0.0000 0.0002 207.7703 +YYCYCC 2191.140134 5 0.0002 1354 | 23/42
30 h-m-p 0.0000 0.0002 183.9575 +YYCYYCCC 2186.533187 7 0.0002 1410 | 23/42
31 h-m-p 0.0002 0.0010 260.7294 +YYCYCYCCC 2157.038109 8 0.0008 1469 | 22/42
32 h-m-p 0.0000 0.0000 780183.8770 CYCCC 2156.151272 4 0.0000 1521 | 22/42
33 h-m-p 0.0005 0.0026 5.0715 +YYCYCC 2154.049357 5 0.0017 1574 | 22/42
34 h-m-p 0.0011 0.0107 8.0758 +YYYC 2152.746232 3 0.0038 1623 | 22/42
35 h-m-p 0.0016 0.0081 11.8074 +YYCCC 2149.631032 4 0.0055 1675 | 22/42
36 h-m-p 0.0002 0.0008 35.8126 +YYCCCC 2148.710633 5 0.0005 1729 | 22/42
37 h-m-p 0.0015 0.0077 8.7320 +YYCCC 2147.675411 4 0.0052 1781 | 22/42
38 h-m-p 0.0203 0.1016 0.6473 +YYYYCC 2141.941958 5 0.0768 1833 | 22/42
39 h-m-p 0.0214 0.1071 0.5718 CCCC 2140.963285 3 0.0228 1904 | 22/42
40 h-m-p 0.0255 0.1274 0.3264 CYCCC 2139.983976 4 0.0513 1976 | 22/42
41 h-m-p 0.0260 0.4431 0.6445 +CYCCC 2136.434876 4 0.2081 2049 | 22/42
42 h-m-p 0.0108 0.0541 2.9952 +YYCYC 2133.648451 4 0.0367 2120 | 22/42
43 h-m-p 0.0437 0.2183 0.5761 +YYCCC 2131.401854 4 0.1469 2172 | 22/42
44 h-m-p 0.0329 0.1647 1.4200 +YYCYC 2128.312010 4 0.1130 2243 | 22/42
45 h-m-p 0.1637 1.8305 0.9800 +CCCC 2122.105574 3 0.6305 2295 | 22/42
46 h-m-p 0.0636 0.3180 0.5497 YCYCCC 2121.066020 5 0.1462 2368 | 22/42
47 h-m-p 0.1436 1.0529 0.5599 +CCYC 2115.648799 3 0.8703 2440 | 22/42
48 h-m-p 0.1248 0.6242 1.6104 YCCCC 2111.775208 4 0.3164 2512 | 22/42
49 h-m-p 0.5532 2.7660 0.7172 YCCC 2107.056223 3 1.1700 2562 | 22/42
50 h-m-p 1.6000 8.0000 0.4339 YCCC 2103.719518 3 3.5991 2632 | 22/42
51 h-m-p 1.1231 5.6153 0.6041 CYCCC 2101.514482 4 2.1477 2704 | 22/42
52 h-m-p 1.6000 8.0000 0.5281 CYCC 2100.510156 3 2.0767 2774 | 22/42
53 h-m-p 1.4585 7.2926 0.7116 YCCC 2099.014476 3 3.5099 2844 | 22/42
54 h-m-p 1.6000 8.0000 0.4803 CCCC 2098.529002 3 2.6931 2915 | 22/42
55 h-m-p 1.6000 8.0000 0.3182 CYCCC 2098.008943 4 3.0491 2987 | 22/42
56 h-m-p 1.6000 8.0000 0.2585 CCC 2097.599705 2 2.3694 3056 | 22/42
57 h-m-p 1.6000 8.0000 0.1352 CCCC 2097.293712 3 2.7658 3127 | 22/42
58 h-m-p 1.6000 8.0000 0.1205 YCCC 2097.034269 3 2.9172 3197 | 22/42
59 h-m-p 0.4674 8.0000 0.7522 +CC 2096.767270 1 2.3836 3265 | 22/42
60 h-m-p 1.6000 8.0000 0.5158 CC 2096.597746 1 1.9322 3332 | 22/42
61 h-m-p 1.6000 8.0000 0.3841 CCC 2096.463740 2 1.8990 3401 | 22/42
62 h-m-p 1.6000 8.0000 0.1596 CCC 2096.365733 2 2.1210 3470 | 22/42
63 h-m-p 1.6000 8.0000 0.1196 YC 2096.269532 1 3.0927 3536 | 22/42
64 h-m-p 1.6000 8.0000 0.1316 CCC 2096.209717 2 1.7895 3605 | 22/42
65 h-m-p 1.6000 8.0000 0.0067 CC 2096.189088 1 2.2515 3672 | 22/42
66 h-m-p 1.6000 8.0000 0.0018 +C 2096.146695 0 6.5573 3738 | 22/42
67 h-m-p 0.0593 8.0000 0.1982 +++YC 2096.098553 1 2.3754 3807 | 22/42
68 h-m-p 1.6000 8.0000 0.0528 CC 2096.056316 1 2.1693 3874 | 22/42
69 h-m-p 1.6000 8.0000 0.0208 +YC 2095.934099 1 5.1667 3941 | 22/42
70 h-m-p 0.3666 8.0000 0.2932 +YCCC 2095.777438 3 3.0394 4012 | 22/42
71 h-m-p 1.6000 8.0000 0.1841 +CC 2095.396979 1 6.4038 4080 | 22/42
72 h-m-p 0.9145 4.5723 0.2973 YCCCC 2094.957118 4 1.7381 4152 | 22/42
73 h-m-p 0.6218 8.0000 0.8309 +CC 2094.455222 1 2.4873 4220 | 22/42
74 h-m-p 0.8114 4.0572 0.0606 YCCCC 2093.840491 4 1.9033 4292 | 22/42
75 h-m-p 0.0670 4.4385 1.7219 ++CYCCC 2092.891568 4 2.0816 4366 | 22/42
76 h-m-p 0.4086 2.0432 0.5195 CYCCC 2092.739552 4 0.6642 4418 | 22/42
77 h-m-p 0.1882 5.2516 1.8331 +CYC 2092.651836 2 0.8025 4487 | 22/42
78 h-m-p 1.6000 8.0000 0.8649 CC 2092.619981 1 1.3336 4534 | 22/42
79 h-m-p 1.6000 8.0000 0.3062 CC 2092.612224 1 1.8247 4601 | 22/42
80 h-m-p 1.6000 8.0000 0.1386 YC 2092.607748 1 2.8979 4667 | 22/42
81 h-m-p 1.6000 8.0000 0.0237 C 2092.606703 0 1.6191 4732 | 22/42
82 h-m-p 1.6000 8.0000 0.0011 C 2092.606540 0 1.8104 4797 | 22/42
83 h-m-p 0.1673 8.0000 0.0117 ++C 2092.606443 0 2.3344 4864 | 22/42
84 h-m-p 1.6000 8.0000 0.0077 YC 2092.606335 1 3.9236 4930 | 22/42
85 h-m-p 1.6000 8.0000 0.0069 ++ 2092.605521 m 8.0000 4995 | 22/42
86 h-m-p 1.6000 8.0000 0.0299 +YC 2092.601996 1 4.2342 5062 | 22/42
87 h-m-p 1.4058 8.0000 0.0900 ++ 2092.569381 m 8.0000 5127 | 22/42
88 h-m-p 0.3852 8.0000 1.8684 +YCC 2092.521535 2 1.2830 5196 | 22/42
89 h-m-p 1.6000 8.0000 0.5545 C 2092.512301 0 1.6000 5241 | 22/42
90 h-m-p 1.6000 8.0000 0.0003 YC 2092.511943 1 1.0809 5307 | 22/42
91 h-m-p 0.0160 8.0000 0.0308 +++C 2092.511923 0 1.3754 5375 | 22/42
92 h-m-p 1.6000 8.0000 0.0024 Y 2092.511923 0 0.8355 5440 | 22/42
93 h-m-p 1.6000 8.0000 0.0002 C 2092.511923 0 0.3612 5505 | 22/42
94 h-m-p 0.2048 8.0000 0.0004 C 2092.511923 0 0.2067 5570 | 22/42
95 h-m-p 0.1852 8.0000 0.0004 C 2092.511923 0 0.2064 5635 | 22/42
96 h-m-p 0.2211 8.0000 0.0004 C 2092.511923 0 0.2415 5700 | 22/42
97 h-m-p 0.2109 8.0000 0.0004 C 2092.511923 0 0.2987 5765 | 22/42
98 h-m-p 0.3653 8.0000 0.0004 C 2092.511923 0 0.3653 5830 | 22/42
99 h-m-p 0.3488 8.0000 0.0004 C 2092.511922 0 0.5313 5895 | 22/42
100 h-m-p 0.5788 8.0000 0.0003 C 2092.511922 0 0.8036 5960 | 22/42
101 h-m-p 0.9347 8.0000 0.0003 C 2092.511922 0 1.4466 6025 | 22/42
102 h-m-p 1.6000 8.0000 0.0002 Y 2092.511922 0 3.5163 6090 | 22/42
103 h-m-p 1.6000 8.0000 0.0003 ++ 2092.511918 m 8.0000 6155 | 22/42
104 h-m-p 0.2536 8.0000 0.0098 ++C 2092.511894 0 3.5414 6222 | 22/42
105 h-m-p 1.6000 8.0000 0.0180 Y 2092.511847 0 3.6004 6287 | 22/42
106 h-m-p 1.6000 8.0000 0.0030 C 2092.511847 0 1.3206 6352 | 22/42
107 h-m-p 1.6000 8.0000 0.0009 --C 2092.511847 0 0.0250 6419 | 22/42
108 h-m-p 0.0317 8.0000 0.0007 --------Y 2092.511847 0 0.0000 6492
Out..
lnL = -2092.511847
6493 lfun, 19479 eigenQcodon, 506454 P(t)
end of tree file.
Time used: 3:39
Model 2: PositiveSelection
TREE # 1
(24, 9, ((((19, 3, 1, 6, 30, 8, 27, 16, 17), (((15, 7, (20, 11)), 18), (22, 12, 28, 23, 26))), 14, 2, 10, 29), 13, 21, 4, 25, 5)); MP score: 48
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
34
0.099690 0.101288 0.015252 0.067597 0.053844 0.048963 0.036732 0.037034 0.033998 0.096232 0.069818 0.055892 0.040608 0.053337 0.077026 0.028455 0.076825 0.024555 0.021379 0.022448 0.058155 0.043567 0.028165 0.072326 0.035308 0.086465 0.037232 0.015674 0.078659 0.092083 0.031736 0.079886 0.047778 0.094343 0.104298 0.011343 0.044450 0.046290 0.096505 27.379835 0.842438 0.163146 0.422096 1.332954
ntime & nrate & np: 39 3 44
Bounds (np=44):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 0.590729
np = 44
lnL0 = -2858.636846
Iterating by ming2
Initial: fx= 2858.636846
x= 0.09969 0.10129 0.01525 0.06760 0.05384 0.04896 0.03673 0.03703 0.03400 0.09623 0.06982 0.05589 0.04061 0.05334 0.07703 0.02845 0.07682 0.02456 0.02138 0.02245 0.05816 0.04357 0.02817 0.07233 0.03531 0.08646 0.03723 0.01567 0.07866 0.09208 0.03174 0.07989 0.04778 0.09434 0.10430 0.01134 0.04445 0.04629 0.09650 27.37983 0.84244 0.16315 0.42210 1.33295
1 h-m-p 0.0000 0.0000 2007.6457 ++ 2724.540819 m 0.0000 49 | 1/44
2 h-m-p 0.0000 0.0000 33653.0863 ++ 2679.787774 m 0.0000 96 | 2/44
3 h-m-p 0.0000 0.0000 7678.6502 ++ 2550.554346 m 0.0000 143 | 3/44
4 h-m-p 0.0000 0.0000 8477.1577 ++ 2514.678890 m 0.0000 190 | 4/44
5 h-m-p 0.0000 0.0000 3665.3556 ++ 2497.524290 m 0.0000 237 | 5/44
6 h-m-p 0.0000 0.0000 2724.4419 ++ 2480.702711 m 0.0000 284 | 6/44
7 h-m-p 0.0000 0.0000 3797.4913 ++ 2479.415340 m 0.0000 331 | 7/44
8 h-m-p 0.0000 0.0000 4705.8288 ++ 2479.075646 m 0.0000 378 | 8/44
9 h-m-p 0.0000 0.0000 21441.8232 ++ 2446.880186 m 0.0000 425 | 9/44
10 h-m-p 0.0000 0.0000 63811.4387 ++ 2432.759014 m 0.0000 472 | 10/44
11 h-m-p 0.0000 0.0000 11985.0897 ++ 2404.888253 m 0.0000 519 | 11/44
12 h-m-p 0.0000 0.0000 5107.9341 ++ 2395.067054 m 0.0000 566 | 12/44
13 h-m-p 0.0000 0.0000 138332.0895 ++ 2347.019897 m 0.0000 613 | 13/44
14 h-m-p 0.0000 0.0000 47397.0774 ++ 2326.649794 m 0.0000 660 | 14/44
15 h-m-p 0.0000 0.0000 2035255.8358 ++ 2325.089794 m 0.0000 707 | 15/44
16 h-m-p 0.0000 0.0000 7031.5281 ++ 2317.014342 m 0.0000 754 | 16/44
17 h-m-p 0.0000 0.0000 91135.7209 ++ 2310.395138 m 0.0000 801 | 17/44
18 h-m-p 0.0000 0.0000 6628.2750 ++ 2301.801064 m 0.0000 848 | 18/44
19 h-m-p 0.0000 0.0000 18429.5270 ++ 2294.743603 m 0.0000 895 | 19/44
20 h-m-p 0.0000 0.0000 7799.8841 ++ 2293.850363 m 0.0000 942 | 20/44
21 h-m-p 0.0000 0.0000 65119.0437 ++ 2289.812291 m 0.0000 989 | 21/44
22 h-m-p 0.0000 0.0000 2178.1351 ++ 2289.282905 m 0.0000 1036 | 22/44
23 h-m-p 0.0000 0.0002 316.2287 +++ 2266.617776 m 0.0002 1084 | 22/44
24 h-m-p 0.0000 0.0001 862.8239 +CYYYCCCCC 2239.664813 8 0.0001 1145 | 22/44
25 h-m-p 0.0000 0.0001 554.0594 +YYYCYYCCC 2228.714787 8 0.0001 1205 | 22/44
26 h-m-p 0.0000 0.0001 817.2412 +YYYYCCC 2218.478805 6 0.0000 1261 | 22/44
27 h-m-p 0.0000 0.0000 587.1541 +YYYYCCCCC 2213.878203 8 0.0000 1321 | 22/44
28 h-m-p 0.0000 0.0000 193.0989 CYCCC 2213.664754 4 0.0000 1375 | 22/44
29 h-m-p 0.0000 0.0018 113.2307 ++++ 2193.979598 m 0.0018 1424 | 22/44
30 h-m-p 0.0000 0.0001 2015.6823 ++ 2179.198543 m 0.0001 1471 | 23/44
31 h-m-p 0.0001 0.0003 677.0052 +CYYCYCCC 2156.712478 7 0.0003 1530 | 23/44
32 h-m-p 0.0001 0.0006 90.8608 +YYYCYCYC 2150.843920 7 0.0005 1588 | 23/44
33 h-m-p 0.0000 0.0001 476.0853 +YYYCCC 2147.294947 5 0.0001 1643 | 23/44
34 h-m-p 0.0002 0.0009 129.0876 +YCYYYCC 2138.019789 6 0.0008 1699 | 23/44
35 h-m-p 0.0000 0.0002 22.9900 ++ 2137.450263 m 0.0002 1746 | 23/44
36 h-m-p 0.0004 0.0110 11.8941 ++YYCYCCC 2132.294380 6 0.0082 1804 | 23/44
37 h-m-p 0.0006 0.0028 17.7392 +YYYCCC 2130.777524 5 0.0020 1859 | 23/44
38 h-m-p 0.0031 0.0157 9.7546 +YYYYCC 2127.132980 5 0.0121 1913 | 23/44
39 h-m-p 0.0008 0.0040 37.6758 YCCCC 2125.481078 4 0.0020 1967 | 23/44
40 h-m-p 0.0124 0.1955 6.0338 ++ 2117.086737 m 0.1955 2014 | 23/44
41 h-m-p -0.0000 -0.0000 20.8507
h-m-p: -5.64805997e-19 -2.82402998e-18 2.08507445e+01 2117.086737
.. | 23/44
42 h-m-p 0.0000 0.0000 241847.6353 --CYCCCCC 2108.310584 6 0.0000 2119 | 23/44
43 h-m-p 0.0000 0.0000 3845.9096 YYCYCCC 2103.242774 6 0.0000 2176 | 23/44
44 h-m-p 0.0000 0.0000 423.2273 YCCC 2102.375396 3 0.0000 2228 | 23/44
45 h-m-p 0.0000 0.0000 306.2263 YCCCC 2102.017099 4 0.0000 2282 | 23/44
46 h-m-p 0.0000 0.0001 236.5962 CCCCC 2101.660364 4 0.0000 2337 | 23/44
47 h-m-p 0.0000 0.0001 420.8423 CCC 2101.343242 2 0.0000 2388 | 23/44
48 h-m-p 0.0000 0.0001 459.8794 +CYYYCC 2099.328489 5 0.0001 2443 | 23/44
49 h-m-p 0.0000 0.0000 5973.0697 +YCCC 2096.666504 3 0.0000 2496 | 23/44
50 h-m-p 0.0000 0.0000 2844.7213 ++ 2096.228401 m 0.0000 2543 | 24/44
51 h-m-p 0.0000 0.0001 108.0603 CC 2096.151322 1 0.0000 2592 | 24/44
52 h-m-p 0.0000 0.0002 38.7783 CCCC 2096.076109 3 0.0000 2645 | 24/44
53 h-m-p 0.0000 0.0001 153.3917 +YYCC 2095.851223 3 0.0000 2697 | 24/44
54 h-m-p 0.0000 0.0001 210.3678 CCCC 2095.583536 3 0.0000 2750 | 24/44
55 h-m-p 0.0000 0.0002 83.4470 YC 2095.545138 1 0.0000 2798 | 24/44
56 h-m-p 0.0000 0.0002 17.0622 CC 2095.542833 1 0.0000 2847 | 24/44
57 h-m-p 0.0001 0.0015 4.2000 C 2095.542639 0 0.0000 2894 | 24/44
58 h-m-p 0.0000 0.0159 3.0238 ++YC 2095.540565 1 0.0004 2944 | 24/44
59 h-m-p 0.0000 0.0072 89.6474 +++YC 2095.278150 1 0.0016 2995 | 24/44
60 h-m-p 0.0000 0.0001 2450.3609 CCCC 2095.132757 3 0.0000 3048 | 24/44
61 h-m-p 0.1641 0.8203 0.1655 +YCCCC 2093.359938 4 0.4338 3103 | 23/44
62 h-m-p 0.0261 0.3635 2.7559 ---CC 2093.359335 1 0.0001 3175 | 23/44
63 h-m-p 0.0081 1.0156 0.0507 ++++ 2093.120170 m 1.0156 3224 | 23/44
64 h-m-p 1.4676 8.0000 0.0351 YCCC 2093.007003 3 0.9235 3297 | 23/44
65 h-m-p 0.6207 8.0000 0.0522 CCC 2092.941546 2 0.9142 3369 | 23/44
66 h-m-p 0.5230 8.0000 0.0913 +YCC 2092.866001 2 1.5064 3441 | 23/44
67 h-m-p 1.0473 8.0000 0.1313 CCC 2092.790544 2 1.2447 3513 | 23/44
68 h-m-p 1.6000 8.0000 0.0847 YCC 2092.748480 2 1.1599 3584 | 22/44
69 h-m-p 0.4858 8.0000 0.2023 +YCC 2092.643348 2 3.0206 3656 | 22/44
70 h-m-p 0.8600 8.0000 0.7106 CCCC 2092.485172 3 1.1882 3731 | 22/44
71 h-m-p 1.2301 6.9618 0.6864 CYC 2092.341650 2 1.0710 3803 | 22/44
72 h-m-p 1.6000 8.0000 0.2748 YCCC 2092.256248 3 0.9474 3877 | 22/44
73 h-m-p 1.5892 8.0000 0.1638 YCC 2092.218085 2 1.1210 3949 | 22/44
74 h-m-p 0.2434 8.0000 0.7545 +YC 2092.189317 1 0.6507 4020 | 22/44
75 h-m-p 1.6000 8.0000 0.1985 C 2092.170835 0 1.5843 4089 | 22/44
76 h-m-p 1.6000 8.0000 0.1824 C 2092.158249 0 1.6000 4158 | 22/44
77 h-m-p 1.6000 8.0000 0.1041 CC 2092.152669 1 1.4533 4229 | 22/44
78 h-m-p 1.6000 8.0000 0.0782 CC 2092.148346 1 2.2322 4300 | 22/44
79 h-m-p 1.6000 8.0000 0.1054 YC 2092.138720 1 3.7195 4370 | 22/44
80 h-m-p 1.6000 8.0000 0.1037 C 2092.133685 0 1.6345 4439 | 22/44
81 h-m-p 1.6000 8.0000 0.1045 +YC 2092.119246 1 4.9083 4510 | 22/44
82 h-m-p 1.3596 8.0000 0.3773 +CC 2092.069577 1 4.7696 4582 | 22/44
83 h-m-p 1.6000 8.0000 1.0211 CCC 2092.016423 2 1.8353 4655 | 22/44
84 h-m-p 1.6000 8.0000 0.4821 CYC 2091.992570 2 1.3867 4705 | 22/44
85 h-m-p 1.6000 8.0000 0.1152 YC 2091.990832 1 1.0749 4775 | 22/44
86 h-m-p 1.6000 8.0000 0.0378 C 2091.990667 0 1.3022 4844 | 22/44
87 h-m-p 1.6000 8.0000 0.0063 C 2091.990655 0 1.3495 4913 | 22/44
88 h-m-p 1.6000 8.0000 0.0039 C 2091.990652 0 2.4881 4982 | 22/44
89 h-m-p 1.6000 8.0000 0.0049 Y 2091.990649 0 3.2792 5051 | 22/44
90 h-m-p 1.6000 8.0000 0.0056 ++ 2091.990624 m 8.0000 5120 | 22/44
91 h-m-p 0.5245 8.0000 0.0856 +C 2091.990566 0 2.0249 5190 | 22/44
92 h-m-p 1.6000 8.0000 0.0178 C 2091.990545 0 1.7479 5259 | 22/44
93 h-m-p 1.6000 8.0000 0.0018 Y 2091.990545 0 0.9571 5328 | 22/44
94 h-m-p 1.6000 8.0000 0.0002 C 2091.990545 0 0.5871 5397 | 22/44
95 h-m-p 0.6102 8.0000 0.0002 C 2091.990545 0 0.7861 5466 | 22/44
96 h-m-p 0.5215 8.0000 0.0004 +Y 2091.990545 0 1.3782 5536 | 22/44
97 h-m-p 0.6765 8.0000 0.0007 +C 2091.990545 0 3.1879 5606 | 22/44
98 h-m-p 0.9735 8.0000 0.0024 ++ 2091.990544 m 8.0000 5675 | 22/44
99 h-m-p 0.5276 8.0000 0.0363 ++ 2091.990539 m 8.0000 5744 | 22/44
100 h-m-p 1.6000 8.0000 0.0237 Y 2091.990518 0 3.7070 5813 | 22/44
101 h-m-p 0.2706 8.0000 0.3241 +++ 2091.990469 m 8.0000 5883 | 22/44
102 h-m-p 1.6000 8.0000 0.2035 C 2091.990466 0 1.3345 5952 | 22/44
103 h-m-p 1.6000 8.0000 0.1641 Y 2091.990464 0 3.7863 6021 | 22/44
104 h-m-p 1.4119 8.0000 0.4401 +Y 2091.990463 0 4.2255 6091 | 22/44
105 h-m-p 1.6000 8.0000 0.1904 Y 2091.990463 0 1.0201 6160 | 22/44
106 h-m-p 0.5706 8.0000 0.3404 Y 2091.990463 0 0.9906 6229 | 22/44
107 h-m-p 0.6956 8.0000 0.4848 +C 2091.990462 0 2.7022 6299 | 22/44
108 h-m-p 1.6000 8.0000 0.3419 +Y 2091.990462 0 4.0549 6369 | 22/44
109 h-m-p 1.6000 8.0000 0.1869 -C 2091.990462 0 0.1382 6439 | 22/44
110 h-m-p 1.6000 8.0000 0.0029 --C 2091.990462 0 0.0263 6510 | 22/44
111 h-m-p 0.0160 8.0000 0.1904 +C 2091.990462 0 0.0640 6580 | 22/44
112 h-m-p 0.0160 8.0000 1.9074 Y 2091.990462 0 0.0321 6649 | 22/44
113 h-m-p 0.0129 6.4457 12.9025 Y 2091.990462 0 0.0308 6696 | 22/44
114 h-m-p 1.6000 8.0000 0.2079 C 2091.990462 0 2.2792 6743 | 22/44
115 h-m-p 1.6000 8.0000 0.0937 Y 2091.990462 0 0.6646 6812 | 22/44
116 h-m-p 0.4263 8.0000 0.1460 ----Y 2091.990462 0 0.0004 6885 | 22/44
117 h-m-p 0.0317 8.0000 0.0019 +C 2091.990462 0 0.1269 6955 | 22/44
118 h-m-p 0.2236 8.0000 0.0011 ---C 2091.990462 0 0.0009 7027 | 22/44
119 h-m-p 0.0160 8.0000 0.0107 -------------.. | 22/44
120 h-m-p 0.0160 8.0000 0.0347 ------------- | 22/44
121 h-m-p 0.0160 8.0000 0.0347 -------------
Out..
lnL = -2091.990462
7268 lfun, 29072 eigenQcodon, 850356 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -2108.493335 S = -2058.674794 -72.245002
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 87 patterns 9:55
did 20 / 87 patterns 9:55
did 30 / 87 patterns 9:55
did 40 / 87 patterns 9:55
did 50 / 87 patterns 9:55
did 60 / 87 patterns 9:55
did 70 / 87 patterns 9:55
did 80 / 87 patterns 9:55
did 87 / 87 patterns 9:55end of tree file.
Time used: 9:55
Model 7: beta
TREE # 1
(24, 9, ((((19, 3, 1, 6, 30, 8, 27, 16, 17), (((15, 7, (20, 11)), 18), (22, 12, 28, 23, 26))), 14, 2, 10, 29), 13, 21, 4, 25, 5)); MP score: 48
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
34
0.041300 0.103764 0.105705 0.063851 0.053471 0.020934 0.033814 0.092941 0.040927 0.090229 0.067866 0.066944 0.072434 0.082813 0.054765 0.097213 0.015346 0.046111 0.042974 0.083673 0.043381 0.097550 0.079702 0.073949 0.024388 0.089302 0.037293 0.083329 0.055277 0.017458 0.023492 0.086504 0.086301 0.024068 0.105298 0.067031 0.051890 0.015501 0.051069 27.932834 0.954331 1.902081
ntime & nrate & np: 39 1 42
Bounds (np=42):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 1.136879
np = 42
lnL0 = -2833.938427
Iterating by ming2
Initial: fx= 2833.938427
x= 0.04130 0.10376 0.10571 0.06385 0.05347 0.02093 0.03381 0.09294 0.04093 0.09023 0.06787 0.06694 0.07243 0.08281 0.05477 0.09721 0.01535 0.04611 0.04297 0.08367 0.04338 0.09755 0.07970 0.07395 0.02439 0.08930 0.03729 0.08333 0.05528 0.01746 0.02349 0.08650 0.08630 0.02407 0.10530 0.06703 0.05189 0.01550 0.05107 27.93283 0.95433 1.90208
1 h-m-p 0.0000 0.0001 1590.4012 ++ 2688.954036 m 0.0001 89 | 1/42
2 h-m-p 0.0000 0.0000 30478.2558 ++ 2673.473950 m 0.0000 176 | 2/42
3 h-m-p 0.0000 0.0000 15502.2930 ++ 2616.019853 m 0.0000 262 | 3/42
4 h-m-p 0.0000 0.0000 12652.8510 ++ 2611.355506 m 0.0000 347 | 4/42
5 h-m-p 0.0000 0.0000 2262.1494 ++ 2537.455913 m 0.0000 431 | 5/42
6 h-m-p 0.0000 0.0000 1216.7397 ++ 2516.377855 m 0.0000 514 | 6/42
7 h-m-p 0.0000 0.0000 21454.7947 ++ 2481.426255 m 0.0000 596 | 7/42
8 h-m-p 0.0000 0.0000 119334.6574 ++ 2463.095737 m 0.0000 677 | 8/42
9 h-m-p 0.0000 0.0000 6100.9629 ++ 2404.262931 m 0.0000 757 | 9/42
10 h-m-p 0.0000 0.0000 26366.1373 ++ 2393.133064 m 0.0000 836 | 10/42
11 h-m-p 0.0000 0.0000 107339.7497 ++ 2333.250508 m 0.0000 914 | 11/42
12 h-m-p 0.0000 0.0000 14479.8250 ++ 2329.226388 m 0.0000 991 | 12/42
13 h-m-p 0.0000 0.0000 4196.3377 ++ 2328.435681 m 0.0000 1067 | 13/42
14 h-m-p 0.0000 0.0000 15737.5069 ++ 2291.104431 m 0.0000 1142 | 14/42
15 h-m-p 0.0000 0.0000 10160.7126 ++ 2283.677689 m 0.0000 1216 | 15/42
16 h-m-p 0.0000 0.0000 7869.9990 ++ 2281.011321 m 0.0000 1289 | 16/42
17 h-m-p 0.0000 0.0000 6131.3368 ++ 2276.614800 m 0.0000 1361 | 17/42
18 h-m-p 0.0000 0.0000 6206.7848 ++ 2270.442822 m 0.0000 1432 | 18/42
19 h-m-p 0.0000 0.0000 9363.3178 ++ 2266.722399 m 0.0000 1502 | 19/42
20 h-m-p 0.0000 0.0000 3687.2688 ++ 2263.125265 m 0.0000 1571 | 20/42
21 h-m-p 0.0000 0.0000 3270.4794 ++ 2255.939654 m 0.0000 1639 | 21/42
22 h-m-p 0.0000 0.0000 2733.6372 ++ 2246.040379 m 0.0000 1706 | 22/42
23 h-m-p 0.0000 0.0000 730.8747 +CYYYCYCCC 2225.229982 8 0.0000 1786 | 22/42
24 h-m-p 0.0000 0.0000 5073.6033 ++ 2197.312794 m 0.0000 1851 | 22/42
25 h-m-p 0.0000 0.0000 3881.1517 ++ 2177.275123 m 0.0000 1916 | 23/42
26 h-m-p 0.0000 0.0000 438.2435 +YYYYYC 2172.640376 5 0.0000 1987 | 23/42
27 h-m-p 0.0000 0.0001 544.4914 ++ 2159.867864 m 0.0001 2051 | 23/42
28 h-m-p 0.0000 0.0000 777.9509 +YYCCCC 2157.451095 5 0.0000 2124 | 23/42
29 h-m-p 0.0000 0.0001 146.2915 +YCYCCC 2155.976169 5 0.0001 2197 | 23/42
30 h-m-p 0.0000 0.0000 591.6723 CYCCC 2155.727403 4 0.0000 2268 | 23/42
31 h-m-p 0.0000 0.0013 82.8091 +++ 2143.780001 m 0.0013 2333 | 22/42
32 h-m-p 0.0000 0.0000 2775.4938
h-m-p: 1.49093681e-22 7.45468407e-22 2.77549381e+03 2143.780001
.. | 22/42
33 h-m-p 0.0000 0.0000 1093586.2648 ---CYCCYCCC 2130.633494 7 0.0000 2475 | 22/42
34 h-m-p 0.0000 0.0000 3206.1411 CYYCCC 2125.417768 5 0.0000 2548 | 22/42
35 h-m-p 0.0000 0.0000 591.6668 +YYYCCC 2122.182442 5 0.0000 2621 | 22/42
36 h-m-p 0.0000 0.0000 1668.5115 +YCYCCC 2120.375215 5 0.0000 2695 | 22/42
37 h-m-p 0.0000 0.0000 875.8641 +YYCCC 2118.348376 4 0.0000 2767 | 22/42
38 h-m-p 0.0000 0.0000 2981.0352 +YYCYCC 2112.887428 5 0.0000 2840 | 22/42
39 h-m-p 0.0000 0.0000 1416.4028 CYCCC 2112.017501 4 0.0000 2912 | 22/42
40 h-m-p 0.0000 0.0000 147.2157 CCCC 2111.920581 3 0.0000 2983 | 22/42
41 h-m-p 0.0000 0.0001 85.3954 CCC 2111.863566 2 0.0000 3052 | 22/42
42 h-m-p 0.0000 0.0002 192.3651 CCC 2111.797955 2 0.0000 3121 | 22/42
43 h-m-p 0.0000 0.0001 123.7115 YCC 2111.768728 2 0.0000 3189 | 22/42
44 h-m-p 0.0000 0.0001 163.9800 YCC 2111.747355 2 0.0000 3257 | 22/42
45 h-m-p 0.0000 0.0012 59.9549 ++YYYC 2111.480524 3 0.0003 3327 | 22/42
46 h-m-p 0.0000 0.0003 1263.9802 +YCCC 2110.331403 3 0.0001 3398 | 22/42
47 h-m-p 0.0000 0.0001 6003.1067 +YYYCCC 2105.284357 5 0.0000 3471 | 22/42
48 h-m-p 0.0000 0.0000 23579.3840 YCYCCC 2103.637389 5 0.0000 3544 | 22/42
49 h-m-p 0.0000 0.0000 20460.2784 YCCCCC 2103.206309 5 0.0000 3618 | 22/42
50 h-m-p 0.0008 0.0041 6.8070 -C 2103.204659 0 0.0001 3684 | 22/42
51 h-m-p 0.0002 0.0868 23.6924 ++++CYYCCC 2097.452894 5 0.0612 3761 | 22/42
52 h-m-p 0.1419 0.7096 0.3620 +YYCCCC 2095.217374 5 0.4413 3835 | 22/42
53 h-m-p 0.4868 4.1261 0.3282 YCCC 2094.381713 3 1.2059 3905 | 22/42
54 h-m-p 0.5130 2.5650 0.2563 CCCC 2094.245518 3 0.5275 3976 | 22/42
55 h-m-p 0.6932 3.4658 0.1788 CYC 2094.152249 2 0.6657 4044 | 22/42
56 h-m-p 1.5459 7.7296 0.0443 YCC 2094.076404 2 0.8646 4112 | 22/42
57 h-m-p 0.2094 8.0000 0.1831 +YCCC 2094.001764 3 1.5026 4183 | 22/42
58 h-m-p 1.6000 8.0000 0.0947 YCCC 2093.943050 3 2.8120 4253 | 22/42
59 h-m-p 1.0035 8.0000 0.2654 +YYCCC 2093.758984 4 3.4873 4325 | 22/42
60 h-m-p 0.2310 1.1550 1.3016 CYYYYC 2093.573461 5 0.5663 4396 | 22/42
61 h-m-p 0.0528 0.2642 2.6195 CYCYC 2093.474229 4 0.1167 4468 | 22/42
62 h-m-p 0.0574 0.2869 0.9225 YYCYCYCCC 2093.352270 8 0.1009 4545 | 22/42
63 h-m-p 0.7523 3.7613 0.0228 CCC 2093.181282 2 0.6391 4614 | 22/42
64 h-m-p 0.1059 1.7939 0.1378 +YYYYCCYCCC 2093.123232 9 0.6337 4693 | 22/42
65 h-m-p 1.3249 7.7711 0.0659 CYC 2093.106200 2 0.3755 4761 | 22/42
66 h-m-p 0.6102 5.1844 0.0406 YCCC 2093.094939 3 1.1850 4831 | 22/42
67 h-m-p 1.4338 7.1692 0.0239 YYC 2093.089644 2 1.4338 4898 | 22/42
68 h-m-p 1.6000 8.0000 0.0092 CC 2093.088275 1 0.5959 4965 | 22/42
69 h-m-p 0.2673 6.4903 0.0205 +YY 2093.086921 1 1.0691 5032 | 22/42
70 h-m-p 1.6000 8.0000 0.0036 YC 2093.086699 1 1.1004 5098 | 22/42
71 h-m-p 1.6000 8.0000 0.0022 CC 2093.086457 1 2.5200 5165 | 22/42
72 h-m-p 1.6000 8.0000 0.0017 ++ 2093.085481 m 8.0000 5230 | 22/42
73 h-m-p 0.7182 8.0000 0.0186 +YCYC 2093.080151 3 5.6940 5300 | 22/42
74 h-m-p 1.1499 8.0000 0.0923 CYC 2093.076114 2 0.8811 5368 | 22/42
75 h-m-p 0.6894 4.6925 0.1180 +YYYY 2093.056044 3 2.6693 5437 | 22/42
76 h-m-p 1.6000 8.0000 0.1046 CCYC 2093.051881 3 2.1631 5507 | 22/42
77 h-m-p 1.6000 8.0000 0.0497 CC 2093.039636 1 1.4448 5574 | 22/42
78 h-m-p 0.4951 8.0000 0.1451 +YC 2093.035246 1 1.2482 5641 | 22/42
79 h-m-p 1.6000 8.0000 0.0208 YC 2093.034451 1 1.1662 5707 | 22/42
80 h-m-p 1.6000 8.0000 0.0058 YC 2093.033847 1 3.0958 5773 | 22/42
81 h-m-p 1.6000 8.0000 0.0078 C 2093.033593 0 1.7225 5838 | 22/42
82 h-m-p 1.6000 8.0000 0.0056 +Y 2093.032929 0 6.7203 5904 | 22/42
83 h-m-p 1.6000 8.0000 0.0078 C 2093.032672 0 1.6000 5969 | 22/42
84 h-m-p 1.6000 8.0000 0.0029 Y 2093.032660 0 0.6720 6034 | 22/42
85 h-m-p 0.1661 8.0000 0.0119 +Y 2093.032603 0 1.5480 6100 | 22/42
86 h-m-p 1.6000 8.0000 0.0035 Y 2093.032597 0 0.6461 6165 | 22/42
87 h-m-p 0.3452 8.0000 0.0066 +C 2093.032570 0 1.6530 6231 | 22/42
88 h-m-p 0.5036 8.0000 0.0218 ++ 2093.032426 m 8.0000 6296 | 22/42
89 h-m-p 1.6000 8.0000 0.0664 +YC 2093.031838 1 4.9629 6363 | 22/42
90 h-m-p 1.6000 8.0000 0.1354 C 2093.031620 0 1.7961 6428 | 22/42
91 h-m-p 1.6000 8.0000 0.0297 C 2093.031590 0 2.3346 6493 | 22/42
92 h-m-p 1.6000 8.0000 0.0361 C 2093.031588 0 0.5011 6558 | 22/42
93 h-m-p 0.8907 8.0000 0.0203 C 2093.031585 0 1.0820 6623 | 22/42
94 h-m-p 1.6000 8.0000 0.0008 ++ 2093.031573 m 8.0000 6688 | 22/42
95 h-m-p 1.1615 8.0000 0.0057 --------------C 2093.031573 0 0.0000 6767 | 22/42
96 h-m-p 0.0160 8.0000 0.0099 ++Y 2093.031572 0 0.6059 6834 | 22/42
97 h-m-p 1.6000 8.0000 0.0016 -C 2093.031572 0 0.1000 6900 | 22/42
98 h-m-p 0.1140 8.0000 0.0014 C 2093.031572 0 0.0302 6965 | 22/42
99 h-m-p 0.0280 8.0000 0.0015 --------------.. | 22/42
100 h-m-p 0.0001 0.0487 0.2006 --C 2093.031572 0 0.0000 7109 | 22/42
101 h-m-p 0.0004 0.1828 0.0728 --C 2093.031572 0 0.0000 7176 | 22/42
102 h-m-p 0.0003 0.1396 0.0249 --C 2093.031572 0 0.0000 7243 | 22/42
103 h-m-p 0.0028 1.4066 0.0071 ------Y 2093.031572 0 0.0000 7314 | 22/42
104 h-m-p 0.0043 2.1293 0.0054 -Y 2093.031572 0 0.0001 7380 | 22/42
105 h-m-p 0.0048 2.3812 0.0085 ---------Y 2093.031572 0 0.0000 7454 | 22/42
106 h-m-p 0.0055 2.7384 0.0047 ---Y 2093.031572 0 0.0000 7522 | 22/42
107 h-m-p 0.0112 5.5947 0.0022 -------Y 2093.031572 0 0.0000 7594 | 22/42
108 h-m-p 0.0117 5.8268 0.0015 -----------Y 2093.031572 0 0.0000 7670 | 22/42
109 h-m-p 0.0160 8.0000 0.0014 ----------C 2093.031572 0 0.0000 7745 | 22/42
110 h-m-p 0.0014 0.7058 0.0448 ----------C 2093.031572 0 0.0000 7820 | 22/42
111 h-m-p 0.0160 8.0000 0.0011 -Y 2093.031572 0 0.0005 7886 | 22/42
112 h-m-p 0.0160 8.0000 0.0009 -------------.. | 22/42
113 h-m-p 0.0001 0.0443 0.1550 --------Y 2093.031572 0 0.0000 8035 | 22/42
114 h-m-p 0.0005 0.2568 0.0364 -----------.. | 22/42
115 h-m-p 0.0001 0.0443 0.1550 ---------
Out..
lnL = -2093.031572
8182 lfun, 90002 eigenQcodon, 3190980 P(t)
end of tree file.
Time used: 33:57
Model 8: beta&w>1
TREE # 1
(24, 9, ((((19, 3, 1, 6, 30, 8, 27, 16, 17), (((15, 7, (20, 11)), 18), (22, 12, 28, 23, 26))), 14, 2, 10, 29), 13, 21, 4, 25, 5)); MP score: 48
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
34
0.095537 0.070577 0.101908 0.088630 0.086657 0.107707 0.064547 0.087324 0.087941 0.015473 0.049029 0.108129 0.093036 0.018047 0.010716 0.050911 0.066610 0.039489 0.085082 0.034583 0.052749 0.053864 0.047427 0.054992 0.063716 0.086431 0.017802 0.086834 0.072524 0.070595 0.072086 0.021813 0.107758 0.040310 0.095154 0.010207 0.024071 0.012613 0.087073 27.591220 0.900000 0.580502 1.868129 1.300000
ntime & nrate & np: 39 2 44
Bounds (np=44):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 1.128714
np = 44
lnL0 = -2692.100893
Iterating by ming2
Initial: fx= 2692.100893
x= 0.09554 0.07058 0.10191 0.08863 0.08666 0.10771 0.06455 0.08732 0.08794 0.01547 0.04903 0.10813 0.09304 0.01805 0.01072 0.05091 0.06661 0.03949 0.08508 0.03458 0.05275 0.05386 0.04743 0.05499 0.06372 0.08643 0.01780 0.08683 0.07252 0.07060 0.07209 0.02181 0.10776 0.04031 0.09515 0.01021 0.02407 0.01261 0.08707 27.59122 0.90000 0.58050 1.86813 1.30000
1 h-m-p 0.0000 0.0000 1392.3584 ++ 2605.372733 m 0.0000 93 | 1/44
2 h-m-p 0.0000 0.0000 8489.8444 ++ 2602.387602 m 0.0000 184 | 2/44
3 h-m-p 0.0000 0.0000 1103.0459 ++ 2581.433286 m 0.0000 274 | 3/44
4 h-m-p 0.0000 0.0000 4230.5739 ++ 2555.460790 m 0.0000 363 | 4/44
5 h-m-p 0.0000 0.0000 3697.5288 ++ 2544.684331 m 0.0000 451 | 5/44
6 h-m-p 0.0000 0.0000 1615.5312 ++ 2540.573677 m 0.0000 538 | 6/44
7 h-m-p 0.0000 0.0000 1649.5357 ++ 2526.109475 m 0.0000 624 | 7/44
8 h-m-p 0.0000 0.0000 21721.9240 ++ 2458.040154 m 0.0000 709 | 8/44
9 h-m-p 0.0000 0.0000 19362.0289 ++ 2436.788287 m 0.0000 793 | 9/44
10 h-m-p 0.0000 0.0000 1488.9653 ++ 2434.155850 m 0.0000 876 | 10/44
11 h-m-p 0.0000 0.0000 9349.5517 ++ 2414.348688 m 0.0000 958 | 11/44
12 h-m-p 0.0000 0.0000 3129.0355 ++ 2398.552076 m 0.0000 1039 | 12/44
13 h-m-p 0.0000 0.0000 5981.4853 ++ 2389.682548 m 0.0000 1119 | 13/44
14 h-m-p 0.0000 0.0000 6511.5411 ++ 2388.602807 m 0.0000 1198 | 14/44
15 h-m-p 0.0000 0.0000 1684.4213 ++ 2359.568866 m 0.0000 1276 | 15/44
16 h-m-p 0.0000 0.0000 68574.3487 ++ 2344.368158 m 0.0000 1353 | 16/44
17 h-m-p 0.0000 0.0000 1591.1553 ++ 2343.054373 m 0.0000 1429 | 17/44
18 h-m-p 0.0000 0.0000 43095.9725 ++ 2341.921477 m 0.0000 1504 | 18/44
19 h-m-p 0.0000 0.0000 3630.5499 ++ 2334.990159 m 0.0000 1578 | 19/44
20 h-m-p 0.0000 0.0000 229849.6036 ++ 2334.186235 m 0.0000 1651 | 20/44
21 h-m-p 0.0000 0.0000 2246.0247 ++ 2323.961587 m 0.0000 1723 | 20/44
22 h-m-p 0.0000 0.0000 1377.5846 ++ 2304.774407 m 0.0000 1794 | 21/44
23 h-m-p 0.0000 0.0000 715.4984 ++ 2303.673758 m 0.0000 1865 | 22/44
24 h-m-p 0.0000 0.0000 11775.4431 ++ 2257.805223 m 0.0000 1935 | 22/44
25 h-m-p 0.0000 0.0000 3713.8140 +YYYCCC 2256.526759 5 0.0000 2012 | 22/44
26 h-m-p 0.0000 0.0000 2179.5279 +YCYYYCYCCC 2247.355300 9 0.0000 2095 | 22/44
27 h-m-p 0.0000 0.0000 3179.3205 +YYYYCYCCC 2243.641651 8 0.0000 2176 | 22/44
28 h-m-p 0.0000 0.0000 2406.3848 ++ 2241.413807 m 0.0000 2245 | 23/44
29 h-m-p 0.0001 0.0003 146.1067 +CYCYCYC 2231.639611 6 0.0003 2324 | 23/44
30 h-m-p 0.0002 0.0010 171.4134 +CYCCCCC 2199.536667 6 0.0010 2405 | 22/44
31 h-m-p 0.0000 0.0000 799.1094 YCCC 2198.874255 3 0.0000 2478 | 22/44
32 h-m-p 0.0000 0.0000 1038.4746 CYCCC 2198.528729 4 0.0000 2554 | 22/44
33 h-m-p 0.0000 0.0000 1534.7580 +YYCCCC 2196.917159 5 0.0000 2632 | 22/44
34 h-m-p 0.0000 0.0002 305.2624 +YYCYYCCC 2190.314199 7 0.0002 2713 | 22/44
35 h-m-p 0.0005 0.0026 36.9432 +YYYC 2184.667473 3 0.0021 2786 | 22/44
36 h-m-p 0.0002 0.0008 27.8519 +CYCCC 2182.269601 4 0.0007 2864 | 22/44
37 h-m-p 0.0001 0.0005 112.4018 +YYCCCC 2179.006252 5 0.0003 2942 | 22/44
38 h-m-p 0.0002 0.0011 77.7611 +YCYYCYCYC 2168.297545 8 0.0010 3023 | 22/44
39 h-m-p 0.0033 0.0167 9.1728 +YCYYYCYCCC 2150.168065 9 0.0153 3106 | 22/44
40 h-m-p 0.0023 0.0115 18.6937 +YCYYYYC 2120.101424 6 0.0109 3184 | 22/44
41 h-m-p 0.0069 0.0344 0.9274 +YYCYCC 2118.391791 5 0.0220 3261 | 22/44
42 h-m-p 0.0176 0.0882 1.1305 +YYYCCC 2111.577232 5 0.0630 3338 | 22/44
43 h-m-p 0.0087 0.0433 2.7726 +YYCYCC 2109.044591 5 0.0304 3415 | 22/44
44 h-m-p 0.0311 0.1557 0.8072 +YYYYYC 2106.166672 5 0.1218 3490 | 22/44
45 h-m-p 0.0623 0.5358 1.5794 YC 2104.653562 1 0.1296 3560 | 22/44
46 h-m-p 0.0475 0.2377 1.0585 +YYCYCC 2102.944226 5 0.1533 3637 | 22/44
47 h-m-p 0.0345 0.1726 4.3771 YCYCCC 2100.201391 5 0.0913 3714 | 22/44
48 h-m-p 0.1213 0.6066 0.3386 +CYCC 2099.052254 3 0.4367 3789 | 22/44
49 h-m-p 0.2360 1.4439 0.6263 CCC 2098.179661 2 0.3669 3862 | 22/44
50 h-m-p 1.0462 5.2312 0.1600 YCY 2097.908786 2 0.7427 3934 | 22/44
51 h-m-p 0.4595 8.0000 0.2586 +YYC 2097.491095 2 1.5237 4006 | 22/44
52 h-m-p 0.5715 3.6122 0.6893 YCCC 2096.994099 3 1.1376 4080 | 22/44
53 h-m-p 0.8081 4.0406 0.7388 YCCC 2096.314263 3 1.5486 4154 | 22/44
54 h-m-p 0.2833 1.4163 1.1464 ++ 2095.694444 m 1.4163 4223 | 22/44
55 h-m-p -0.0000 -0.0000 0.3778
h-m-p: -0.00000000e+00 -0.00000000e+00 3.77826631e-01 2095.694444
.. | 22/44
56 h-m-p 0.0000 0.0001 12330.4597 -CYCYCYC 2093.206285 6 0.0000 4369 | 22/44
57 h-m-p 0.0000 0.0001 781.4778 CYCCC 2092.811617 4 0.0000 4445 | 22/44
58 h-m-p 0.0000 0.0001 152.4530 CCC 2092.685565 2 0.0000 4518 | 22/44
59 h-m-p 0.0000 0.0001 64.4913 YC 2092.669642 1 0.0000 4588 | 22/44
60 h-m-p 0.0000 0.0001 58.2741 CC 2092.653701 1 0.0000 4659 | 22/44
61 h-m-p 0.0000 0.0006 40.9146 CC 2092.643903 1 0.0000 4730 | 22/44
62 h-m-p 0.0000 0.0004 44.4852 CC 2092.632246 1 0.0000 4801 | 22/44
63 h-m-p 0.0000 0.0006 88.5775 CC 2092.624040 1 0.0000 4872 | 22/44
64 h-m-p 0.0000 0.0005 82.9740 CC 2092.613251 1 0.0000 4943 | 22/44
65 h-m-p 0.0001 0.0003 23.7289 C 2092.611778 0 0.0000 5012 | 22/44
66 h-m-p 0.0000 0.0056 7.7630 YC 2092.610449 1 0.0001 5082 | 22/44
67 h-m-p 0.0000 0.0004 19.9010 C 2092.610117 0 0.0000 5151 | 22/44
68 h-m-p 0.0000 0.0031 6.1962 C 2092.609857 0 0.0000 5220 | 22/44
69 h-m-p 0.0000 0.0064 3.4684 C 2092.609800 0 0.0000 5289 | 22/44
70 h-m-p 0.0001 0.0262 2.0742 +YC 2092.609319 1 0.0004 5360 | 22/44
71 h-m-p 0.0000 0.0023 72.2606 ++YC 2092.589061 1 0.0004 5432 | 22/44
72 h-m-p 0.0001 0.0005 86.2501 -CC 2092.588551 1 0.0000 5504 | 22/44
73 h-m-p 0.0013 0.3484 0.6050 CC 2092.588240 1 0.0020 5575 | 22/44
74 h-m-p 0.0000 0.0038 130.9608 +++YCYCCC 2092.524966 5 0.0015 5655 | 22/44
75 h-m-p 0.0001 0.0003 536.0121 YC 2092.523689 1 0.0000 5725 | 22/44
76 h-m-p 0.0220 8.0000 0.2237 +++YCCC 2092.372817 3 2.8415 5802 | 22/44
77 h-m-p 0.2249 1.1247 0.4477 CYCCC 2092.330703 4 0.3446 5878 | 22/44
78 h-m-p 0.4066 3.6524 0.3794 CCC 2092.250845 2 0.5433 5951 | 22/44
79 h-m-p 1.2429 8.0000 0.1659 YCC 2092.196816 2 2.7230 6023 | 22/44
80 h-m-p 0.2636 1.3180 1.0001 CYCCC 2092.158607 4 0.4031 6099 | 22/44
81 h-m-p 1.3956 8.0000 0.2889 CC 2092.139318 1 1.4006 6170 | 22/44
82 h-m-p 1.6000 8.0000 0.1050 CC 2092.133248 1 0.5291 6241 | 22/44
83 h-m-p 0.3068 8.0000 0.1811 +CC 2092.128805 1 1.5661 6313 | 22/44
84 h-m-p 1.6000 8.0000 0.0306 CC 2092.128078 1 2.3541 6384 | 22/44
85 h-m-p 1.6000 8.0000 0.0309 ++ 2092.124959 m 8.0000 6453 | 22/44
86 h-m-p 0.5863 8.0000 0.4213 +CC 2092.118010 1 2.6196 6525 | 22/44
87 h-m-p 1.6000 8.0000 0.4508 ++ 2092.086448 m 8.0000 6594 | 22/44
88 h-m-p 1.6000 8.0000 1.3776 CC 2092.076782 1 2.1106 6665 | 22/44
89 h-m-p 1.6000 8.0000 0.8896 CCC 2092.074332 2 1.3393 6738 | 22/44
90 h-m-p 1.6000 8.0000 0.6789 +C 2092.067754 0 6.0999 6808 | 22/44
91 h-m-p 1.6000 8.0000 1.2179 +CC 2092.046330 1 6.6690 6880 | 22/44
92 h-m-p 1.6000 8.0000 3.3115 CCC 2092.033805 2 1.7909 6953 | 22/44
93 h-m-p 1.6000 8.0000 1.9134 CC 2092.032389 1 2.1350 7024 | 22/44
94 h-m-p 1.6000 8.0000 1.9176 YC 2092.031197 1 2.8277 7094 | 22/44
95 h-m-p 1.6000 8.0000 0.5167 YC 2092.030683 1 3.7608 7164 | 22/44
96 h-m-p 1.6000 8.0000 0.3159 ++ 2092.026791 m 8.0000 7233 | 22/44
97 h-m-p 1.6000 8.0000 0.9686 CC 2092.022944 1 1.2645 7304 | 22/44
98 h-m-p 0.3666 8.0000 3.3411 +C 2092.022368 0 1.8596 7374 | 22/44
99 h-m-p 1.6000 8.0000 1.0846 YC 2092.021982 1 3.4255 7444 | 22/44
100 h-m-p 1.6000 8.0000 1.4688 +C 2092.021427 0 5.7805 7514 | 22/44
101 h-m-p 1.6000 8.0000 1.5092 ++ 2092.017400 m 8.0000 7583 | 22/44
102 h-m-p 0.1551 0.7756 26.7090 ++ 2092.011032 m 0.7756 7652 | 22/44
103 h-m-p 0.0000 0.0000 39.3716
h-m-p: 0.00000000e+00 0.00000000e+00 3.93715595e+01 2092.011032
.. | 22/44
104 h-m-p 0.0000 0.0008 9.5253 YC 2092.010798 1 0.0000 7788 | 22/44
105 h-m-p 0.0000 0.0030 3.6382 C 2092.010712 0 0.0000 7857 | 22/44
106 h-m-p 0.0000 0.0093 2.4025 Y 2092.010682 0 0.0000 7926 | 22/44
107 h-m-p 0.0000 0.0108 1.2622 C 2092.010667 0 0.0000 7995 | 22/44
108 h-m-p 0.0000 0.0165 2.7468 C 2092.010657 0 0.0000 8064 | 22/44
109 h-m-p 0.0000 0.0146 1.5496 Y 2092.010651 0 0.0000 8133 | 22/44
110 h-m-p 0.0000 0.0184 0.6331 Y 2092.010649 0 0.0000 8202 | 22/44
111 h-m-p 0.0001 0.0274 0.1568 Y 2092.010648 0 0.0000 8271 | 22/44
112 h-m-p 0.0002 0.1104 0.1747 Y 2092.010648 0 0.0000 8340 | 22/44
113 h-m-p 0.0004 0.1773 0.2547 C 2092.010647 0 0.0001 8409 | 22/44
114 h-m-p 0.0002 0.0943 1.5322 Y 2092.010646 0 0.0000 8478 | 22/44
115 h-m-p 0.0000 0.0142 7.8730 C 2092.010634 0 0.0000 8547 | 22/44
116 h-m-p 0.0001 0.0258 22.2613 C 2092.010571 0 0.0001 8616 | 22/44
117 h-m-p 0.0000 0.0084 84.8109 +YC 2092.010136 1 0.0001 8687 | 22/44
118 h-m-p 0.0000 0.0074 1085.1315 +YC 2092.006065 1 0.0001 8758 | 22/44
119 h-m-p 0.0001 0.0003 1486.1581 -CC 2092.005782 1 0.0000 8830 | 22/44
120 h-m-p 0.0004 0.0061 18.6979 --C 2092.005776 0 0.0000 8901 | 22/44
121 h-m-p 0.0178 1.0339 0.0095 -----------Y 2092.005776 0 0.0000 8981 | 22/44
122 h-m-p 0.0160 8.0000 0.0105 Y 2092.005775 0 0.0325 9050 | 22/44
123 h-m-p 0.0000 0.0070 35.7450 +++Y 2092.005696 0 0.0007 9122 | 22/44
124 h-m-p 0.0048 0.0438 5.2854 C 2092.005588 0 0.0064 9191 | 22/44
125 h-m-p 0.7139 3.5696 0.0365 +C 2092.005317 0 2.5691 9261 | 22/44
126 h-m-p 0.2113 1.0564 0.0027 ++ 2092.005312 m 1.0564 9330 | 23/44
127 h-m-p 0.3436 8.0000 0.0080 +C 2092.005298 0 2.1316 9400 | 23/44
128 h-m-p 1.6000 8.0000 0.0057 Y 2092.005276 0 3.9323 9468 | 23/44
129 h-m-p 1.6000 8.0000 0.0009 ++ 2092.005264 m 8.0000 9536 | 23/44
130 h-m-p 0.5863 8.0000 0.0122 +Y 2092.005175 0 4.1172 9605 | 23/44
131 h-m-p 1.5875 8.0000 0.0315 ++ 2092.004252 m 8.0000 9673 | 23/44
132 h-m-p 0.2807 8.0000 0.8987 +YC 2092.002937 1 0.9347 9743 | 23/44
133 h-m-p 1.6000 8.0000 0.0077 Y 2092.002936 0 0.9430 9811 | 23/44
134 h-m-p 1.6000 8.0000 0.0004 --C 2092.002936 0 0.0263 9881 | 23/44
135 h-m-p 0.0260 8.0000 0.0004 C 2092.002936 0 0.0065 9949 | 23/44
136 h-m-p 0.0160 8.0000 0.0004 ---C 2092.002936 0 0.0001 10020
Out..
lnL = -2092.002936
10021 lfun, 120252 eigenQcodon, 4299009 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -2112.275751 S = -2058.664991 -49.860003
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 87 patterns 1:05:08
did 20 / 87 patterns 1:05:08
did 30 / 87 patterns 1:05:08
did 40 / 87 patterns 1:05:08
did 50 / 87 patterns 1:05:08
did 60 / 87 patterns 1:05:09
did 70 / 87 patterns 1:05:09
did 80 / 87 patterns 1:05:09
did 87 / 87 patterns 1:05:09end of tree file.
Time used: 1:05:09
The loglikelihoods for models M1, M2, M7 and M8 are -2092.511847 -2091.990462 -2093.031572 -2092.002936 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFISLTCFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLC
************:** ********************************************
N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1 FANKFFQFNQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRYGFHVLHFL
N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRYGFHVLHFL
N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRYGFHVLHFL
BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRYGFHVLHFL
HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRYGFHVLHFL
N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1 FANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFL
********:*********.********************************:********
N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYTDGVMKNASLY
N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYTDGVMKNASLY
N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYTDGVMKNASLY
BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYTDGVMKNASLY
HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYTDGVMKNASLY
N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1 TYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLY
*************************************************:**********
N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1 TSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSW
************************************************************
N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFLSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 VLNNDYYRSVPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1 VLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYL
*********:********:*******:*********************************
N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1 IKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIM
******************:*****************************************
N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCNDSTFEETSLTTFMIT
HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCNDSTFEETSLTTFMIT
N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCNDSTFEETSLTTFMIT
HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCNDSTFEETSLTTFMIT
N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1 HLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMIT
********************************************.***************
N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1 KDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGND
************************************************************
N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1 VLYQPPTASVSTSFLQ
****************
>N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTGTTAGTTTAATCTGTTTTATATTATTGTGGGCTTTATTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTATTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATATCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTGTTAGTTTAATCTGTTTTATATTATTGTGGGCTTTATTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTGTTAGTTTAATCTGTTTTATATTATTGTGGGCTTTATTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTATTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAGGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATATCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTATTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTATTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAGGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATATCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTGTTAGTTTAATCTGTTTTATATTATTGTGGGCTTTATTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTTTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATTGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTCTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATATGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCTTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTCTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTCGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTATTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAATGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCTTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTGTTAGTTTAATCTGTTTTATATTATTGTGGGCTTTATTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATTGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAACGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTATTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAGGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATATCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTAATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTATTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATATCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTTTTTACTATCATAATTCTATGGATTGCCCTATTGTTGTGGCAGTTATGGATGAAGATATTGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTCTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATATGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTCGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTATTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTCTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAATGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCTTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATTTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTATTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGATATGGCTTTCATGTTTTACATTTTCTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGTTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATACAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTAGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTCAATTTTAATAGTTCCTGGGTTTTGAATAACGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATTTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTCGTTTTGGTTTTTTATTATTTAATAAAACTCAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTATTGTTTGGTGTATTAATTTTCTTATGCTCTTTGTCTTTCAAGTTTATCCTATTTGTGCATGCGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCGGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTATTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAGGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATATCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTATTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATATCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAACCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTTTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATTGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTCTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATATGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGACTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTCGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTATTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAATGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCTTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTGTTAGTTTAATCTGTTTTATATTATTGTGGGCTTTATTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTGTTAGTTTAATCTGTTTTATATTATTGTGGGCTTTATTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTGTTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTTTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATTGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACCTATTGTAGAGTGGGTGCATGTGAATATGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCTTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTCTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTATTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCTTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCATAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTGTTAGTTTAATCTGTTTTATATTATTGTGGGCTTTATTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTTTTTACTATCATAATTCTATGGATTGCCCTATTGTTGTGGCAGTTATGGATGAAGATATTGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTCTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATATGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTCGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTATTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTCTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAATGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCTTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTATTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAGGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATATCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATTTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTATTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGATATGGCTTTCATGTTTTACATTTTCTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGTTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATACAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTAGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTCAATTTTAATAGTTCCTGGGTTTTGAATAACGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATTTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTCGTTTTGGTTTTTTATTATTTAATAAAACTCAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTATTGTTTGGTGTATTAATTTTCTTATGCTCTTTGTCTTTCAAGTTTATCCTATTTGTGCATGCGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATTTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTATTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGATATGGCTTTCATGTTTTACATTTTCTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGTTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATACAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTAGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTCAATTTTAATAGTTCCTGGGTTTTGAATAACGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATTTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTCGTTTTGGTTTTTTATTATTTAATAAAACTCAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTATTGTTTGGTGTATTAATTTTCTTATGCTCTTTGTCTTTCAAGTTTATCCTATTTGTGCATGCGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATTGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAACGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTATTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAGGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATATCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTATTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAGGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATATCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATTTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTATTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGATATGGCTTTCATGTTTTACATTTTCTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGTTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATACAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTAGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTCAATTTTAATAGTTCCTGGGTTTTGAATAACGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATTTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTCGTTTTGGTTTTTTATTATTTAATAAAACTCAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTATTGTTTGGTGTATTAATTTTCTTATGCTCTTTGTCTTTCAAGTTTATCCTATTTGTGCATGCGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTGTTAGTTTAATCTGTTTTATATTATTGTGGGCTTTATTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTGTGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATTTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTATTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGATATGGCTTTCATGTTTTACATTTTCTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGTTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATACAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTAGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTCAATTTTAATAGTTCCTGGGTTTTGAATAACGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATTTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTCGTTTTGGTTTTTTATTATTTAATAAAACTCAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTATTGTTTGGTGTATTAATTTTCTTATGCTCTTTGTCTTTCAAGTTTATCCTATTTGTGCATGCGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTATTAGTTTAATCTGTTTTATATTATTGTGGGCTTTACTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTATTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATATCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA >HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1 GTTGTATTGAGTAATTTGTTATATATATTATTTTTTGTTAGTTTAATCTGTTTTATATTATTGTGGGCTTTATTGCCTACATATAGTGTTTATAAGTCTGATATTCATTTGCCTGCTTATGCTAGTTTTAAAGTTATTGATAATGGTGTTGTTAGAGATATTTCAGTTAATGATTTATGTTTTGCTAATAAATTTTTCCAATTTGATCAATGGTATGAGTCCACTTTTGGGTCTGTTTACTATCATAATTCTATGGATTGCCCTATTGTAGTGGCAGTTATGGATGAAGATATCGGTTCTACTATGTTTAATGTTCCTACTAAAGTTTTGAGACATGGCTTTCATGTTTTACATTTTTTAACTTATGCATTTGCTAGTGATAGTGTTCAGTGCTATACACCACATATTCAGATTTCTTATAATGATTTTTATGCTAGTGGTTGTGTTTTATCATCTTTGTGTACTATGTTTAAAAGAGGTGATGGTACACCACATCCTTATTGTTATTCAGATGGTGTTATGAAGAATGCTTCTTTGTATACATCTTTGGTTCCACATACACGTTATAGCCTTGCTAATTCTAATGGTTTTATAAGATTTCCTGATGTTATTAGTGAAGGTATTGTACGTATTGTAAGAACGCGCTCTATGACTTATTGTAGAGTGGGTGCATGTGAATACGCCGAAGAGGGTATATGTTTTAATTTTAATAGTTCCTGGGTTTTGAATAATGATTATTATAGAAGTATGCCTGGAACTTTTTGTGGTAGAGATCTTTTTGATTTGTTTTATCAATTTTTTAGTAGTTTAATTCGTCCTATAGATTTCTTTTCTCTTACTGCTAGTTCTATTTTTGGAGCTATATTGGCTATAGTTGTTGTCTTGGTTTTTTATTATTTAATAAAACTTAAGCGTGCTTTTGGAGATTATACTAGTGTTGTAGTTATAAATGTTGTTGTTTGGTGTATTAATTTTCTTATGCTTTTTGTTTTTCAAGTTTATCCTATTTGTGCATGTGTTTATGCTTGTTTTTATTTTTATGTAACATTGTATTTTCCTTCTGAAATTAGTGTAATTATGCATTTGCAATGGATTGTTATGTATGGTGCTATAATGCCTTTTTGGTTTTGTGTCACATATGTAGCTATGGTTATTGCAAACCATGTTTTATGGTTATTTTCATATTGTAGGAAAATTGGTGTTAATGTATGTAGTGATAGTACATTTGAAGAAACATCTCTTACTACTTTTATGATTACTAAAGATTCTTATTGTAGATTAAAGAATTCTGTTTCTGATGTTGCCTACAATAGATATTTGAGTTTGTATAATAAGTATCGTTACTATAGTGGTAAAATGGATACTGCTGCCTATAGAGAAGCGGCGTGTTCTCAGTTAGCTAAAGCTATGGAAACATTTAATCACAATAATGGTAATGATGTCTTATACCAACCTCCTACAGCATCTGTTTCTACATCTTTTTTGCAA
>N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFLSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFNQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFISLTCFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSFYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCNDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSVPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRYGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYTDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDFFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVIVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1 VVLSNLLYILFFISLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ >HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1 VVLSNLLYILFFVSLICFILLWALLPTYSVYKSDIHLPAYASFKVIDNGVVRDISVNDLCFANKFFQFDQWYESTFGSVYYHNSMDCPIVVAVMDEDIGSTMFNVPTKVLRHGFHVLHFLTYAFASDSVQCYTPHIQISYNDFYASGCVLSSLCTMFKRGDGTPHPYCYSDGVMKNASLYTSLVPHTRYSLANSNGFIRFPDVISEGIVRIVRTRSMTYCRVGACEYAEEGICFNFNSSWVLNNDYYRSMPGTFCGRDLFDLFYQFFSSLIRPIDFFSLTASSIFGAILAIVVVLVFYYLIKLKRAFGDYTSVVVINVVVWCINFLMLFVFQVYPICACVYACFYFYVTLYFPSEISVIMHLQWIVMYGAIMPFWFCVTYVAMVIANHVLWLFSYCRKIGVNVCSDSTFEETSLTTFMITKDSYCRLKNSVSDVAYNRYLSLYNKYRYYSGKMDTAAYREAACSQLAKAMETFNHNNGNDVLYQPPTASVSTSFLQ
Reading sequence file /data//pss_subsets/BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result/original_alignment/codeml/fasta/BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result.1
Found 30 sequences of length 1488
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 0.7%
Found 32 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 2
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 27 polymorphic sites
**p-Value(s)**
----------
NSS: 1.47e-01 (1000 permutations)
Max Chi^2: 9.33e-01 (1000 permutations)
PHI (Permutation): 9.00e-02 (1000 permutations)
PHI (Normal): 5.78e-02
#NEXUS
[ID: 1470486239]
begin taxa;
dimensions ntax=30;
taxlabels
BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1
N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1
N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1
N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1
N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1
N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1
N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1
BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1
N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1
N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1
N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1
N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1
N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1
N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1
N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1
N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1
N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1
N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1
N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1
SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1
SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1
UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1
HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1
HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1
;
end;
begin trees;
translate
1 BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1,
2 HKU1_human_USA_HKU1_18_2010_nsp4_VIPR_ALG4_530291049_8755_10242_1_2010_01_22_USA_Human_Human_coronavirus_HKU1,
3 HKU1_human_USA_HKU1_5_2009_nsp4_VIPR_ALG4_545299228_8740_10227_1_2009_11_28_USA_Human_Human_coronavirus_HKU1,
4 N08_87_nsp4_VIPR_ALG4_ARB07436_1_8694_10181_1_2016_USA_Human_Human_coronavirus_HKU1,
5 N09_1627B_nsp4_VIPR_ALG4_ARB07605_1_8702_10189_1_2016_USA_Human_Human_coronavirus_HKU1,
6 N09_1663B_nsp4_VIPR_ALG4_ARB07596_1_8270_9757_1_2016_USA_Human_Human_coronavirus_HKU1,
7 N10_nsp4_VIPR_ALG4_89515513_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1,
8 N13_nsp4_VIPR_ALG4_89515531_8561_10048_1_NA_China_Unknown_Human_coronavirus_HKU1,
9 N14_nsp4_VIPR_ALG4_89515540_8591_10078_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1,
10 BJ01_p9_nsp4_VIPR_ALG4_1002824425_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1,
11 N16_nsp4_VIPR_ALG4_89515558_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1,
12 N17_nsp4_VIPR_ALG4_89515567_8594_10081_1_NA_China_Unknown_Human_coronavirus_HKU1,
13 N18_nsp4_VIPR_ALG4_89515576_8681_10168_1_NA_China_Unknown_Human_coronavirus_HKU1,
14 N19_nsp4_VIPR_ALG4_89515414_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1,
15 N20_nsp4_VIPR_ALG4_89515423_8654_10141_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1,
16 N21_nsp4_VIPR_ALG4_89515432_8624_10111_1_NA_Hong_Kong_Unknown_Human_coronavirus_HKU1,
17 N23_nsp4_VIPR_ALG4_89515450_8606_10093_1_NA_China_Unknown_Human_coronavirus_HKU1,
18 N25_nsp4_VIPR_ALG4_89515468_8654_10141_1_NA_China_Unknown_Human_coronavirus_HKU1,
19 N5P8_nsp4_VIPR_ALG4_85541021_8564_10051_1_NA_NA_Unknown_Human_coronavirus_HKU1,
20 N6_nsp4_VIPR_ALG4_89515486_8351_9838_1_NA_China_Unknown_Human_coronavirus_HKU1,
21 N7_nsp4_VIPR_ALG4_89515495_8651_10138_1_NA_China_Unknown_Human_coronavirus_HKU1,
22 SC2521_nsp4_VIPR_ALG4_AZS52616_1_8717_10204_1_2017_USA_Human_Human_coronavirus_HKU1,
23 SI17244_nsp4_VIPR_ALG4_AYN64559_1_8620_10107_1_2017_06_04_Thailand_Human_Human_coronavirus_HKU1,
24 UNKNOWN_AY884001_nsp4_VIPR_ALG4_62198465_8624_10111_1_NA_NA_Unknown_Human_coronavirus_HKU1,
25 HKU1_ORF1ab_YP_459935_1_NA_USA_Human_Human_coronavirus_HKU1,
26 HKU1_human_USA_HKU1_10_2010_nsp4_VIPR_ALG4_545299238_8650_10137_1_2010_01_16_USA_Human_Human_coronavirus_HKU1,
27 HKU1_human_USA_HKU1_11_2009_nsp4_VIPR_ALG4_545299248_8560_10047_1_2009_12_13_USA_Human_Human_coronavirus_HKU1,
28 HKU1_human_USA_HKU1_12_2010_nsp4_VIPR_ALG4_545299278_8800_10287_1_2010_01_09_USA_Human_Human_coronavirus_HKU1,
29 HKU1_human_USA_HKU1_13_2010_nsp4_VIPR_ALG4_545299258_8800_10287_1_2010_01_08_USA_Human_Human_coronavirus_HKU1,
30 HKU1_human_USA_HKU1_15_2009_nsp4_VIPR_ALG4_545299268_8512_9999_1_2009_12_28_USA_Human_Human_coronavirus_HKU1
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:2.642977e-04,10:2.524612e-04,((((2:2.664741e-04,3:2.678277e-04,5:2.561149e-04,6:2.593549e-04,25:2.628902e-04,26:2.754036e-04,27:6.386250e-04,28:2.743399e-04,29:2.638178e-04)0.793:9.740725e-04,(((4:9.766274e-04,18:9.434062e-04,(23:2.605836e-04,24:2.437635e-04)1.000:1.004478e-03)0.942:1.396421e-03,22:2.328287e-03)1.000:2.163170e-03,(11:2.570859e-04,12:2.421323e-04,15:2.560276e-04,16:2.548304e-04,19:2.459733e-04)1.000:6.663275e-03)0.661:7.565527e-04)0.995:1.134965e-03,7:2.629832e-04,9:2.523825e-04,20:6.473027e-04,21:2.716588e-04)0.881:6.267764e-04,8:6.109108e-04,13:2.620117e-04,14:9.505783e-04,17:2.557314e-04,30:6.524756e-04)1.000:9.913953e-04);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:2.642977e-04,10:2.524612e-04,((((2:2.664741e-04,3:2.678277e-04,5:2.561149e-04,6:2.593549e-04,25:2.628902e-04,26:2.754036e-04,27:6.386250e-04,28:2.743399e-04,29:2.638178e-04):9.740725e-04,(((4:9.766274e-04,18:9.434062e-04,(23:2.605836e-04,24:2.437635e-04):1.004478e-03):1.396421e-03,22:2.328287e-03):2.163170e-03,(11:2.570859e-04,12:2.421323e-04,15:2.560276e-04,16:2.548304e-04,19:2.459733e-04):6.663275e-03):7.565527e-04):1.134965e-03,7:2.629832e-04,9:2.523825e-04,20:6.473027e-04,21:2.716588e-04):6.267764e-04,8:6.109108e-04,13:2.620117e-04,14:9.505783e-04,17:2.557314e-04,30:6.524756e-04):9.913953e-04);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2225.78 -2253.49
2 -2229.58 -2253.56
--------------------------------------
TOTAL -2226.45 -2253.53
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.041196 0.000056 0.027599 0.056936 0.040550 1494.98 1497.99 1.000
r(A<->C){all} 0.028858 0.000791 0.000006 0.084137 0.020100 412.99 418.30 1.000
r(A<->G){all} 0.239074 0.004931 0.115442 0.377927 0.233947 526.28 557.61 1.000
r(A<->T){all} 0.022952 0.000193 0.002189 0.050164 0.020124 562.50 686.86 1.000
r(C<->G){all} 0.038428 0.001379 0.000006 0.114897 0.027713 300.07 391.13 1.000
r(C<->T){all} 0.650120 0.006057 0.500457 0.795281 0.652423 541.54 554.59 1.000
r(G<->T){all} 0.020567 0.000231 0.000024 0.050875 0.016857 624.73 652.01 1.000
pi(A){all} 0.253071 0.000120 0.231308 0.273528 0.253068 863.17 977.66 1.000
pi(C){all} 0.115857 0.000067 0.099384 0.131177 0.115685 1164.34 1178.39 1.000
pi(G){all} 0.183726 0.000098 0.164239 0.202783 0.183637 826.93 888.72 1.000
pi(T){all} 0.447346 0.000162 0.422969 0.472522 0.447531 735.77 824.30 1.000
alpha{1,2} 0.124593 0.029417 0.000011 0.344377 0.085677 1014.46 1094.47 1.000
alpha{3} 2.284749 1.699733 0.319334 4.962356 2.006349 941.56 1094.01 1.000
pinvar{all} 0.739602 0.008891 0.551677 0.881567 0.756660 595.88 776.86 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/BJ01_p3_nsp4_VIPR_ALG4_1002824416_8681_10168_1_2009_04_23_China_Human_Human_coronavirus_HKU1.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 30 ls = 496
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 40 40 40 40 40 40 | Ser TCT 21 21 21 21 21 21 | Tyr TAT 35 36 35 36 37 35 | Cys TGT 18 18 18 18 18 18
TTC 2 2 2 2 2 2 | TCC 2 2 2 2 2 2 | TAC 5 4 5 4 3 5 | TGC 2 2 2 2 2 2
Leu TTA 16 17 16 17 17 16 | TCA 4 4 4 4 4 4 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 18 16 18 17 16 18 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 7 7 7 7 7 7
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 7 7 7 7 7 7 | Pro CCT 13 13 13 13 13 13 | His CAT 10 10 10 10 10 10 | Arg CGT 5 5 5 5 5 5
CTC 0 0 0 0 0 0 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 1 | CGC 1 1 1 1 1 1
CTA 0 0 0 0 0 0 | CCA 3 3 3 3 3 3 | Gln CAA 7 7 7 7 7 7 | CGA 0 0 0 0 0 0
CTG 0 1 0 0 1 0 | CCG 0 0 0 0 0 0 | CAG 3 3 3 3 3 3 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 19 20 19 19 20 19 | Thr ACT 13 13 13 13 13 13 | Asn AAT 24 24 24 24 24 24 | Ser AGT 19 19 19 19 19 19
ATC 2 2 2 2 2 2 | ACC 0 0 0 0 0 0 | AAC 1 1 1 1 1 1 | AGC 1 1 1 1 1 1
ATA 10 10 10 10 10 10 | ACA 12 12 12 12 12 12 | Lys AAA 9 9 9 8 8 9 | Arg AGA 11 11 11 11 11 11
Met ATG 15 15 15 15 15 15 | ACG 1 1 1 1 1 1 | AAG 5 5 5 6 6 5 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 36 35 36 36 35 36 | Ala GCT 18 18 18 18 18 18 | Asp GAT 23 23 23 23 23 23 | Gly GGT 15 15 15 15 15 15
GTC 3 3 3 3 3 3 | GCC 3 3 3 3 3 3 | GAC 0 0 0 0 0 0 | GGC 1 1 1 1 1 1
GTA 9 9 9 9 9 9 | GCA 6 6 6 6 6 6 | Glu GAA 9 9 9 9 9 9 | GGA 3 3 3 3 3 3
GTG 2 2 2 2 2 2 | GCG 2 2 2 2 2 2 | GAG 2 2 2 2 2 2 | GGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 40 40 40 40 41 40 | Ser TCT 22 21 21 21 21 21 | Tyr TAT 36 35 36 36 36 37 | Cys TGT 18 18 18 18 18 18
TTC 2 2 2 2 2 3 | TCC 1 2 2 2 2 2 | TAC 4 5 4 4 4 4 | TGC 2 2 2 2 2 2
Leu TTA 15 16 17 17 15 16 | TCA 4 4 4 4 4 3 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 17 18 16 16 17 16 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 7 7 7 7 7 7
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 8 7 7 7 7 4 | Pro CCT 13 13 13 13 13 13 | His CAT 10 10 10 10 10 9 | Arg CGT 5 5 5 5 5 5
CTC 0 0 0 0 0 2 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 1 | CGC 1 1 1 1 1 1
CTA 1 0 0 0 1 1 | CCA 3 3 3 3 3 3 | Gln CAA 7 7 7 7 7 7 | CGA 0 0 0 0 0 0
CTG 1 0 1 1 1 1 | CCG 0 0 0 0 0 0 | CAG 3 3 3 3 3 3 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 22 19 21 20 22 22 | Thr ACT 13 13 13 13 13 13 | Asn AAT 25 24 23 25 25 23 | Ser AGT 18 19 19 19 18 19
ATC 1 2 1 2 1 1 | ACC 0 0 0 0 0 0 | AAC 1 1 2 1 1 2 | AGC 1 1 1 1 1 1
ATA 10 10 10 10 10 10 | ACA 12 12 12 12 12 13 | Lys AAA 9 9 8 9 9 9 | Arg AGA 11 11 11 11 11 11
Met ATG 15 15 15 15 15 15 | ACG 1 1 1 1 1 1 | AAG 5 5 6 5 5 5 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 32 36 35 35 32 33 | Ala GCT 19 18 18 18 19 18 | Asp GAT 23 23 23 22 23 23 | Gly GGT 15 15 15 15 15 15
GTC 4 3 3 3 5 4 | GCC 2 3 3 3 2 3 | GAC 0 0 0 0 0 0 | GGC 1 1 1 1 1 1
GTA 9 9 9 9 8 9 | GCA 6 6 6 6 6 6 | Glu GAA 9 9 9 9 9 9 | GGA 3 3 3 3 3 3
GTG 2 2 2 2 2 2 | GCG 2 2 2 2 2 2 | GAG 2 2 2 2 2 2 | GGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 40 40 41 40 40 40 | Ser TCT 21 21 21 21 21 22 | Tyr TAT 36 36 36 35 35 36 | Cys TGT 18 18 18 18 18 18
TTC 2 2 2 2 2 3 | TCC 2 2 2 2 2 1 | TAC 4 4 4 5 5 4 | TGC 2 2 2 2 2 2
Leu TTA 17 17 15 16 16 16 | TCA 4 4 4 4 4 4 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 16 16 17 18 18 17 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 7 7 7 7 7 7
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 7 7 7 7 7 7 | Pro CCT 13 13 13 13 13 13 | His CAT 10 10 10 10 10 11 | Arg CGT 5 5 5 5 5 5
CTC 0 0 0 0 0 0 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 0 | CGC 1 1 1 1 1 1
CTA 0 0 1 0 0 0 | CCA 3 3 3 3 3 3 | Gln CAA 7 7 7 7 7 7 | CGA 0 0 0 0 0 0
CTG 1 1 1 0 0 1 | CCG 0 0 0 0 0 0 | CAG 3 3 3 3 3 3 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 20 20 22 19 19 21 | Thr ACT 13 13 13 13 13 12 | Asn AAT 24 24 25 24 24 24 | Ser AGT 19 19 18 19 19 19
ATC 2 2 0 2 2 1 | ACC 0 0 1 0 0 1 | AAC 1 1 1 1 1 1 | AGC 1 1 1 1 1 1
ATA 10 10 10 10 10 10 | ACA 12 12 12 12 12 12 | Lys AAA 8 9 9 9 9 9 | Arg AGA 11 11 11 11 11 11
Met ATG 15 15 15 15 15 15 | ACG 1 1 1 1 1 1 | AAG 6 5 5 5 5 5 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 35 35 32 36 36 34 | Ala GCT 18 18 19 18 18 19 | Asp GAT 23 23 22 23 23 23 | Gly GGT 15 15 15 15 15 15
GTC 3 3 4 3 3 3 | GCC 3 3 2 3 3 2 | GAC 0 0 1 0 0 0 | GGC 1 1 1 1 1 1
GTA 9 9 9 9 9 9 | GCA 5 6 6 6 6 6 | Glu GAA 9 9 9 9 9 9 | GGA 3 3 3 3 3 3
GTG 2 2 2 2 2 2 | GCG 3 2 2 2 2 2 | GAG 2 2 2 2 2 2 | GGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 40 41 40 40 40 40 | Ser TCT 21 21 21 21 21 21 | Tyr TAT 35 36 36 37 37 36 | Cys TGT 18 18 18 18 18 18
TTC 2 2 2 3 3 2 | TCC 2 2 2 2 2 2 | TAC 5 4 4 4 4 4 | TGC 2 2 2 2 2 2
Leu TTA 16 15 17 16 16 17 | TCA 4 4 4 3 3 4 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 18 17 16 16 16 16 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 7 7 7 7 7 7
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 7 7 7 4 4 7 | Pro CCT 13 13 13 13 13 13 | His CAT 10 10 10 9 9 10 | Arg CGT 5 5 5 5 5 5
CTC 0 0 0 2 2 0 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 1 | CGC 1 1 1 1 1 1
CTA 0 1 0 1 1 0 | CCA 3 3 3 3 3 3 | Gln CAA 7 7 7 7 7 7 | CGA 0 0 0 0 0 0
CTG 0 1 1 1 1 1 | CCG 0 0 0 0 0 0 | CAG 3 3 3 3 3 3 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 19 22 20 22 22 21 | Thr ACT 13 13 13 13 13 13 | Asn AAT 24 25 24 23 23 23 | Ser AGT 19 18 19 19 19 19
ATC 2 1 2 1 1 1 | ACC 0 0 0 0 0 0 | AAC 1 1 1 2 2 2 | AGC 1 1 1 1 1 1
ATA 10 10 10 10 10 10 | ACA 12 12 12 13 13 12 | Lys AAA 9 9 8 9 9 8 | Arg AGA 11 11 11 11 11 11
Met ATG 15 15 15 15 15 15 | ACG 1 1 1 1 1 1 | AAG 5 5 6 5 5 6 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 36 32 35 33 33 35 | Ala GCT 18 19 18 18 18 18 | Asp GAT 23 23 23 23 23 23 | Gly GGT 15 15 15 15 15 15
GTC 3 5 3 4 4 3 | GCC 3 2 3 3 3 3 | GAC 0 0 0 0 0 0 | GGC 1 1 1 1 1 1
GTA 9 8 9 9 9 9 | GCA 6 6 6 6 6 6 | Glu GAA 9 9 9 9 9 9 | GGA 3 3 3 3 3 3
GTG 2 2 2 2 2 2 | GCG 2 2 2 2 2 2 | GAG 2 2 2 2 2 2 | GGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 40 40 40 40 40 40 | Ser TCT 21 21 21 21 21 21 | Tyr TAT 36 37 35 37 36 35 | Cys TGT 18 18 18 18 18 18
TTC 2 3 2 3 2 2 | TCC 2 2 2 2 2 2 | TAC 4 4 5 4 4 5 | TGC 2 2 2 2 2 2
Leu TTA 17 16 16 16 17 16 | TCA 4 3 4 3 4 4 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 16 16 18 16 16 18 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 7 7 7 7 7 7
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 7 4 7 4 7 7 | Pro CCT 13 13 13 13 13 13 | His CAT 10 9 10 9 10 10 | Arg CGT 5 5 5 5 5 5
CTC 0 2 0 2 0 0 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 1 | CGC 1 1 1 1 1 1
CTA 0 1 0 1 0 0 | CCA 3 3 3 3 3 3 | Gln CAA 7 7 7 7 7 7 | CGA 0 0 0 0 0 0
CTG 1 1 0 1 1 0 | CCG 0 0 0 0 0 0 | CAG 3 3 3 3 3 3 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 20 22 19 22 20 19 | Thr ACT 13 13 13 13 13 13 | Asn AAT 24 23 24 23 24 24 | Ser AGT 19 19 19 19 19 19
ATC 2 1 2 1 2 2 | ACC 0 0 0 0 0 0 | AAC 1 2 1 2 1 1 | AGC 1 1 1 1 1 1
ATA 10 10 10 10 10 10 | ACA 12 13 12 13 12 12 | Lys AAA 8 9 9 9 9 9 | Arg AGA 11 11 11 11 11 11
Met ATG 15 15 14 15 15 15 | ACG 1 1 1 1 1 1 | AAG 6 5 5 5 5 5 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 35 33 36 33 35 36 | Ala GCT 18 18 18 18 18 18 | Asp GAT 23 23 23 23 23 23 | Gly GGT 15 15 15 15 15 15
GTC 3 4 3 4 3 3 | GCC 3 3 3 3 3 3 | GAC 0 0 0 0 0 0 | GGC 1 1 1 1 1 1
GTA 9 9 9 9 9 9 | GCA 6 6 6 6 6 6 | Glu GAA 9 9 9 9 9 9 | GGA 3 3 3 3 3 3
GTG 2 2 3 2 2 2 | GCG 2 2 2 2 2 2 | GAG 2 2 2 2 2 2 | GGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C14
position 1: T:0.34274 C:0.10081 A:0.28831 G:0.26815
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63710 C:0.04839 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25269 G:0.18481
#2: C19
position 1: T:0.34073 C:0.10282 A:0.29032 G:0.26613
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63911 C:0.04637 A:0.20161 G:0.11290
Average T:0.44691 C:0.11559 A:0.25403 G:0.18347
#3: C11
position 1: T:0.34274 C:0.10081 A:0.28831 G:0.26815
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63710 C:0.04839 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25269 G:0.18481
#4: C24
position 1: T:0.34274 C:0.10081 A:0.28831 G:0.26815
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63911 C:0.04637 A:0.19960 G:0.11492
Average T:0.44758 C:0.11492 A:0.25269 G:0.18481
#5: C9
position 1: T:0.34073 C:0.10282 A:0.29032 G:0.26613
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.64113 C:0.04435 A:0.19960 G:0.11492
Average T:0.44758 C:0.11492 A:0.25336 G:0.18414
#6: C15
position 1: T:0.34274 C:0.10081 A:0.28831 G:0.26815
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63710 C:0.04839 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25269 G:0.18481
#7: C30
position 1: T:0.33871 C:0.10685 A:0.29234 G:0.26210
position 2: T:0.36089 C:0.19758 A:0.27218 G:0.16935
position 3: T:0.64315 C:0.04234 A:0.19960 G:0.11492
Average T:0.44758 C:0.11559 A:0.25470 G:0.18212
#8: C5
position 1: T:0.34274 C:0.10081 A:0.28831 G:0.26815
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63710 C:0.04839 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25269 G:0.18481
#9: C2
position 1: T:0.34073 C:0.10282 A:0.29032 G:0.26613
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63911 C:0.04637 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25336 G:0.18414
#10: C33
position 1: T:0.34073 C:0.10282 A:0.29234 G:0.26411
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63911 C:0.04637 A:0.20161 G:0.11290
Average T:0.44691 C:0.11559 A:0.25470 G:0.18280
#11: C38
position 1: T:0.34073 C:0.10484 A:0.29234 G:0.26210
position 2: T:0.36089 C:0.19758 A:0.27218 G:0.16935
position 3: T:0.64113 C:0.04637 A:0.19758 G:0.11492
Average T:0.44758 C:0.11626 A:0.25403 G:0.18212
#12: C22
position 1: T:0.34073 C:0.10081 A:0.29435 G:0.26411
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63105 C:0.05444 A:0.20161 G:0.11290
Average T:0.44422 C:0.11761 A:0.25538 G:0.18280
#13: C18
position 1: T:0.34073 C:0.10282 A:0.29032 G:0.26613
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63911 C:0.04637 A:0.19758 G:0.11694
Average T:0.44691 C:0.11559 A:0.25269 G:0.18481
#14: C16
position 1: T:0.34073 C:0.10282 A:0.29032 G:0.26613
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63911 C:0.04637 A:0.20161 G:0.11290
Average T:0.44691 C:0.11559 A:0.25403 G:0.18347
#15: C12
position 1: T:0.34073 C:0.10484 A:0.29234 G:0.26210
position 2: T:0.35887 C:0.19960 A:0.27218 G:0.16935
position 3: T:0.63911 C:0.04637 A:0.19960 G:0.11492
Average T:0.44624 C:0.11694 A:0.25470 G:0.18212
#16: C7
position 1: T:0.34274 C:0.10081 A:0.28831 G:0.26815
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63710 C:0.04839 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25269 G:0.18481
#17: C8
position 1: T:0.34274 C:0.10081 A:0.28831 G:0.26815
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63710 C:0.04839 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25269 G:0.18481
#18: C35
position 1: T:0.34274 C:0.10282 A:0.29032 G:0.26411
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.64315 C:0.04234 A:0.19960 G:0.11492
Average T:0.44892 C:0.11425 A:0.25336 G:0.18347
#19: C10
position 1: T:0.34274 C:0.10081 A:0.28831 G:0.26815
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63710 C:0.04839 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25269 G:0.18481
#20: C37
position 1: T:0.34073 C:0.10484 A:0.29234 G:0.26210
position 2: T:0.36089 C:0.19758 A:0.27218 G:0.16935
position 3: T:0.64113 C:0.04637 A:0.19758 G:0.11492
Average T:0.44758 C:0.11626 A:0.25403 G:0.18212
#21: C23
position 1: T:0.34073 C:0.10282 A:0.29032 G:0.26613
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63911 C:0.04637 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25336 G:0.18414
#22: C21
position 1: T:0.34073 C:0.10081 A:0.29435 G:0.26411
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63105 C:0.05444 A:0.20161 G:0.11290
Average T:0.44422 C:0.11761 A:0.25538 G:0.18280
#23: C26
position 1: T:0.34073 C:0.10081 A:0.29435 G:0.26411
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63105 C:0.05444 A:0.20161 G:0.11290
Average T:0.44422 C:0.11761 A:0.25538 G:0.18280
#24: C1
position 1: T:0.34073 C:0.10282 A:0.29032 G:0.26613
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63911 C:0.04637 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25336 G:0.18414
#25: C28
position 1: T:0.34073 C:0.10282 A:0.29032 G:0.26613
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63911 C:0.04637 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25336 G:0.18414
#26: C31
position 1: T:0.34073 C:0.10081 A:0.29435 G:0.26411
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63105 C:0.05444 A:0.20161 G:0.11290
Average T:0.44422 C:0.11761 A:0.25538 G:0.18280
#27: C6
position 1: T:0.34274 C:0.10081 A:0.28629 G:0.27016
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63710 C:0.04839 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25202 G:0.18548
#28: C25
position 1: T:0.34073 C:0.10081 A:0.29435 G:0.26411
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63105 C:0.05444 A:0.20161 G:0.11290
Average T:0.44422 C:0.11761 A:0.25538 G:0.18280
#29: C34
position 1: T:0.34073 C:0.10282 A:0.29032 G:0.26613
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63911 C:0.04637 A:0.20161 G:0.11290
Average T:0.44691 C:0.11559 A:0.25403 G:0.18347
#30: C4
position 1: T:0.34274 C:0.10081 A:0.28831 G:0.26815
position 2: T:0.36089 C:0.19758 A:0.27016 G:0.17137
position 3: T:0.63710 C:0.04839 A:0.19960 G:0.11492
Average T:0.44691 C:0.11559 A:0.25269 G:0.18481
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 1203 | Ser S TCT 632 | Tyr Y TAT 1077 | Cys C TGT 540
TTC 66 | TCC 58 | TAC 128 | TGC 60
Leu L TTA 487 | TCA 115 | *** * TAA 0 | *** * TGA 0
TTG 504 | TCG 0 | TAG 0 | Trp W TGG 210
------------------------------------------------------------------------------
Leu L CTT 196 | Pro P CCT 390 | His H CAT 296 | Arg R CGT 150
CTC 10 | CCC 0 | CAC 29 | CGC 30
CTA 9 | CCA 90 | Gln Q CAA 210 | CGA 0
CTG 20 | CCG 0 | CAG 90 | CGG 0
------------------------------------------------------------------------------
Ile I ATT 611 | Thr T ACT 389 | Asn N AAT 718 | Ser S AGT 566
ATC 47 | ACC 2 | AAC 37 | AGC 30
ATA 300 | ACA 365 | Lys K AAA 263 | Arg R AGA 330
Met M ATG 449 | ACG 30 | AAG 157 | AGG 30
------------------------------------------------------------------------------
Val V GTT 1037 | Ala A GCT 545 | Asp D GAT 688 | Gly G GGT 450
GTC 101 | GCC 85 | GAC 1 | GGC 30
GTA 268 | GCA 179 | Glu E GAA 270 | GGA 90
GTG 61 | GCG 61 | GAG 60 | GGG 30
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.34140 C:0.10215 A:0.29059 G:0.26586
position 2: T:0.36082 C:0.19765 A:0.27043 G:0.17110
position 3: T:0.63763 C:0.04798 A:0.20000 G:0.11438
Average T:0.44662 C:0.11593 A:0.25367 G:0.18378
Model 1: NearlyNeutral (2 categories)
TREE # 1: (24, 9, ((((19, 3, 1, 6, 30, 8, 27, 16, 17), (((15, 7, (20, 11)), 18), (22, 12, 28, 23, 26))), 14, 2, 10, 29), 13, 21, 4, 25, 5)); MP score: 48
lnL(ntime: 39 np: 42): -2092.511847 +0.000000
31..24 31..9 31..32 32..33 33..34 34..35 35..19 35..3 35..1 35..6 35..30 35..8 35..27 35..16 35..17 34..36 36..37 37..38 38..15 38..7 38..39 39..20 39..11 37..18 36..40 40..22 40..12 40..28 40..23 40..26 33..14 33..2 33..10 33..29 32..13 32..21 32..4 32..25 32..5
0.000004 0.000004 0.004241 0.002110 0.004544 0.003944 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.002084 0.000004 0.000004 0.002163 0.009438 0.006257 0.004263 0.004277 0.004252 0.000004 0.000004 0.011554 0.035562 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.002111 0.000004 0.002108 0.000004 0.004231 0.000004 0.002119 27.379835 0.970962 0.018878
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.105347
(24: 0.000004, 9: 0.000004, ((((19: 0.000004, 3: 0.000004, 1: 0.000004, 6: 0.000004, 30: 0.000004, 8: 0.000004, 27: 0.002084, 16: 0.000004, 17: 0.000004): 0.003944, (((15: 0.004263, 7: 0.004277, (20: 0.000004, 11: 0.000004): 0.004252): 0.006257, 18: 0.011554): 0.009438, (22: 0.000004, 12: 0.000004, 28: 0.000004, 23: 0.000004, 26: 0.000004): 0.035562): 0.002163): 0.004544, 14: 0.000004, 2: 0.000004, 10: 0.002111, 29: 0.000004): 0.002110, 13: 0.002108, 21: 0.000004, 4: 0.004231, 25: 0.000004, 5: 0.002119): 0.004241);
(C1: 0.000004, C2: 0.000004, ((((C10: 0.000004, C11: 0.000004, C14: 0.000004, C15: 0.000004, C4: 0.000004, C5: 0.000004, C6: 0.002084, C7: 0.000004, C8: 0.000004): 0.003944, (((C12: 0.004263, C30: 0.004277, (C37: 0.000004, C38: 0.000004): 0.004252): 0.006257, C35: 0.011554): 0.009438, (C21: 0.000004, C22: 0.000004, C25: 0.000004, C26: 0.000004, C31: 0.000004): 0.035562): 0.002163): 0.004544, C16: 0.000004, C19: 0.000004, C33: 0.002111, C34: 0.000004): 0.002110, C18: 0.002108, C23: 0.000004, C24: 0.004231, C28: 0.000004, C9: 0.002119): 0.004241);
Detailed output identifying parameters
kappa (ts/tv) = 27.37983
MLEs of dN/dS (w) for site classes (K=2)
p: 0.97096 0.02904
w: 0.01888 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..24 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
31..9 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
31..32 0.004 1317.8 170.2 0.0474 0.0004 0.0090 0.6 1.5
32..33 0.002 1317.8 170.2 0.0474 0.0002 0.0045 0.3 0.8
33..34 0.005 1317.8 170.2 0.0474 0.0005 0.0097 0.6 1.6
34..35 0.004 1317.8 170.2 0.0474 0.0004 0.0084 0.5 1.4
35..19 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
35..3 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
35..1 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
35..6 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
35..30 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
35..8 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
35..27 0.002 1317.8 170.2 0.0474 0.0002 0.0044 0.3 0.8
35..16 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
35..17 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
34..36 0.002 1317.8 170.2 0.0474 0.0002 0.0046 0.3 0.8
36..37 0.009 1317.8 170.2 0.0474 0.0010 0.0201 1.3 3.4
37..38 0.006 1317.8 170.2 0.0474 0.0006 0.0133 0.8 2.3
38..15 0.004 1317.8 170.2 0.0474 0.0004 0.0091 0.6 1.5
38..7 0.004 1317.8 170.2 0.0474 0.0004 0.0091 0.6 1.6
38..39 0.004 1317.8 170.2 0.0474 0.0004 0.0091 0.6 1.5
39..20 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
39..11 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
37..18 0.012 1317.8 170.2 0.0474 0.0012 0.0246 1.5 4.2
36..40 0.036 1317.8 170.2 0.0474 0.0036 0.0758 4.7 12.9
40..22 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
40..12 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
40..28 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
40..23 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
40..26 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
33..14 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
33..2 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
33..10 0.002 1317.8 170.2 0.0474 0.0002 0.0045 0.3 0.8
33..29 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
32..13 0.002 1317.8 170.2 0.0474 0.0002 0.0045 0.3 0.8
32..21 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
32..4 0.004 1317.8 170.2 0.0474 0.0004 0.0090 0.6 1.5
32..25 0.000 1317.8 170.2 0.0474 0.0000 0.0000 0.0 0.0
32..5 0.002 1317.8 170.2 0.0474 0.0002 0.0045 0.3 0.8
Time used: 3:39
Model 2: PositiveSelection (3 categories)
TREE # 1: (24, 9, ((((19, 3, 1, 6, 30, 8, 27, 16, 17), (((15, 7, (20, 11)), 18), (22, 12, 28, 23, 26))), 14, 2, 10, 29), 13, 21, 4, 25, 5)); MP score: 48
check convergence..
lnL(ntime: 39 np: 44): -2091.990462 +0.000000
31..24 31..9 31..32 32..33 33..34 34..35 35..19 35..3 35..1 35..6 35..30 35..8 35..27 35..16 35..17 34..36 36..37 37..38 38..15 38..7 38..39 39..20 39..11 37..18 36..40 40..22 40..12 40..28 40..23 40..26 33..14 33..2 33..10 33..29 32..13 32..21 32..4 32..25 32..5
0.000004 0.000004 0.004218 0.002093 0.005211 0.003190 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.002065 0.000004 0.000004 0.002687 0.009239 0.006864 0.004241 0.004252 0.004231 0.000004 0.000004 0.010876 0.036587 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.002094 0.000004 0.002091 0.000004 0.004195 0.000004 0.002101 27.932834 0.994933 0.000000 0.032835 3.867708
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.106322
(24: 0.000004, 9: 0.000004, ((((19: 0.000004, 3: 0.000004, 1: 0.000004, 6: 0.000004, 30: 0.000004, 8: 0.000004, 27: 0.002065, 16: 0.000004, 17: 0.000004): 0.003190, (((15: 0.004241, 7: 0.004252, (20: 0.000004, 11: 0.000004): 0.004231): 0.006864, 18: 0.010876): 0.009239, (22: 0.000004, 12: 0.000004, 28: 0.000004, 23: 0.000004, 26: 0.000004): 0.036587): 0.002687): 0.005211, 14: 0.000004, 2: 0.000004, 10: 0.002094, 29: 0.000004): 0.002093, 13: 0.002091, 21: 0.000004, 4: 0.004195, 25: 0.000004, 5: 0.002101): 0.004218);
(C1: 0.000004, C2: 0.000004, ((((C10: 0.000004, C11: 0.000004, C14: 0.000004, C15: 0.000004, C4: 0.000004, C5: 0.000004, C6: 0.002065, C7: 0.000004, C8: 0.000004): 0.003190, (((C12: 0.004241, C30: 0.004252, (C37: 0.000004, C38: 0.000004): 0.004231): 0.006864, C35: 0.010876): 0.009239, (C21: 0.000004, C22: 0.000004, C25: 0.000004, C26: 0.000004, C31: 0.000004): 0.036587): 0.002687): 0.005211, C16: 0.000004, C19: 0.000004, C33: 0.002094, C34: 0.000004): 0.002093, C18: 0.002091, C23: 0.000004, C24: 0.004195, C28: 0.000004, C9: 0.002101): 0.004218);
Detailed output identifying parameters
kappa (ts/tv) = 27.93283
MLEs of dN/dS (w) for site classes (K=3)
p: 0.99493 0.00000 0.00507
w: 0.03284 1.00000 3.86771
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..24 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
31..9 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
31..32 0.004 1317.8 170.2 0.0523 0.0005 0.0087 0.6 1.5
32..33 0.002 1317.8 170.2 0.0523 0.0002 0.0043 0.3 0.7
33..34 0.005 1317.8 170.2 0.0523 0.0006 0.0108 0.7 1.8
34..35 0.003 1317.8 170.2 0.0523 0.0003 0.0066 0.5 1.1
35..19 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
35..3 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
35..1 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
35..6 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
35..30 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
35..8 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
35..27 0.002 1317.8 170.2 0.0523 0.0002 0.0043 0.3 0.7
35..16 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
35..17 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
34..36 0.003 1317.8 170.2 0.0523 0.0003 0.0056 0.4 0.9
36..37 0.009 1317.8 170.2 0.0523 0.0010 0.0192 1.3 3.3
37..38 0.007 1317.8 170.2 0.0523 0.0007 0.0142 1.0 2.4
38..15 0.004 1317.8 170.2 0.0523 0.0005 0.0088 0.6 1.5
38..7 0.004 1317.8 170.2 0.0523 0.0005 0.0088 0.6 1.5
38..39 0.004 1317.8 170.2 0.0523 0.0005 0.0088 0.6 1.5
39..20 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
39..11 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
37..18 0.011 1317.8 170.2 0.0523 0.0012 0.0226 1.6 3.8
36..40 0.037 1317.8 170.2 0.0523 0.0040 0.0759 5.2 12.9
40..22 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
40..12 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
40..28 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
40..23 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
40..26 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
33..14 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
33..2 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
33..10 0.002 1317.8 170.2 0.0523 0.0002 0.0043 0.3 0.7
33..29 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
32..13 0.002 1317.8 170.2 0.0523 0.0002 0.0043 0.3 0.7
32..21 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
32..4 0.004 1317.8 170.2 0.0523 0.0005 0.0087 0.6 1.5
32..25 0.000 1317.8 170.2 0.0523 0.0000 0.0000 0.0 0.0
32..5 0.002 1317.8 170.2 0.0523 0.0002 0.0044 0.3 0.7
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C14)
Pr(w>1) post mean +- SE for w
13 V 0.999** 3.863
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C14)
Pr(w>1) post mean +- SE for w
13 V 0.747 1.675 +- 0.887
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.787 0.145 0.040 0.014 0.006 0.003 0.002 0.001 0.001 0.000
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
sum of density on p0-p1 = 1.000000
Time used: 9:55
Model 7: beta (10 categories)
TREE # 1: (24, 9, ((((19, 3, 1, 6, 30, 8, 27, 16, 17), (((15, 7, (20, 11)), 18), (22, 12, 28, 23, 26))), 14, 2, 10, 29), 13, 21, 4, 25, 5)); MP score: 48
check convergence..
lnL(ntime: 39 np: 42): -2093.031572 +0.000000
31..24 31..9 31..32 32..33 33..34 34..35 35..19 35..3 35..1 35..6 35..30 35..8 35..27 35..16 35..17 34..36 36..37 37..38 38..15 38..7 38..39 39..20 39..11 37..18 36..40 40..22 40..12 40..28 40..23 40..26 33..14 33..2 33..10 33..29 32..13 32..21 32..4 32..25 32..5
0.000004 0.000004 0.004273 0.002127 0.004434 0.004134 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.002100 0.000004 0.000004 0.001981 0.009649 0.006133 0.004296 0.004310 0.004284 0.000004 0.000004 0.011770 0.035736 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.002128 0.000004 0.002125 0.000004 0.004264 0.000004 0.002135 27.591220 0.011936 0.217118
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.105964
(24: 0.000004, 9: 0.000004, ((((19: 0.000004, 3: 0.000004, 1: 0.000004, 6: 0.000004, 30: 0.000004, 8: 0.000004, 27: 0.002100, 16: 0.000004, 17: 0.000004): 0.004134, (((15: 0.004296, 7: 0.004310, (20: 0.000004, 11: 0.000004): 0.004284): 0.006133, 18: 0.011770): 0.009649, (22: 0.000004, 12: 0.000004, 28: 0.000004, 23: 0.000004, 26: 0.000004): 0.035736): 0.001981): 0.004434, 14: 0.000004, 2: 0.000004, 10: 0.002128, 29: 0.000004): 0.002127, 13: 0.002125, 21: 0.000004, 4: 0.004264, 25: 0.000004, 5: 0.002135): 0.004273);
(C1: 0.000004, C2: 0.000004, ((((C10: 0.000004, C11: 0.000004, C14: 0.000004, C15: 0.000004, C4: 0.000004, C5: 0.000004, C6: 0.002100, C7: 0.000004, C8: 0.000004): 0.004134, (((C12: 0.004296, C30: 0.004310, (C37: 0.000004, C38: 0.000004): 0.004284): 0.006133, C35: 0.011770): 0.009649, (C21: 0.000004, C22: 0.000004, C25: 0.000004, C26: 0.000004, C31: 0.000004): 0.035736): 0.001981): 0.004434, C16: 0.000004, C19: 0.000004, C33: 0.002128, C34: 0.000004): 0.002127, C18: 0.002125, C23: 0.000004, C24: 0.004264, C28: 0.000004, C9: 0.002135): 0.004273);
Detailed output identifying parameters
kappa (ts/tv) = 27.59122
Parameters in M7 (beta):
p = 0.01194 q = 0.21712
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00008 0.51685
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..24 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
31..9 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
31..32 0.004 1317.8 170.2 0.0517 0.0005 0.0089 0.6 1.5
32..33 0.002 1317.8 170.2 0.0517 0.0002 0.0044 0.3 0.8
33..34 0.004 1317.8 170.2 0.0517 0.0005 0.0092 0.6 1.6
34..35 0.004 1317.8 170.2 0.0517 0.0004 0.0086 0.6 1.5
35..19 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
35..3 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
35..1 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
35..6 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
35..30 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
35..8 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
35..27 0.002 1317.8 170.2 0.0517 0.0002 0.0044 0.3 0.7
35..16 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
35..17 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
34..36 0.002 1317.8 170.2 0.0517 0.0002 0.0041 0.3 0.7
36..37 0.010 1317.8 170.2 0.0517 0.0010 0.0201 1.4 3.4
37..38 0.006 1317.8 170.2 0.0517 0.0007 0.0128 0.9 2.2
38..15 0.004 1317.8 170.2 0.0517 0.0005 0.0089 0.6 1.5
38..7 0.004 1317.8 170.2 0.0517 0.0005 0.0090 0.6 1.5
38..39 0.004 1317.8 170.2 0.0517 0.0005 0.0089 0.6 1.5
39..20 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
39..11 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
37..18 0.012 1317.8 170.2 0.0517 0.0013 0.0245 1.7 4.2
36..40 0.036 1317.8 170.2 0.0517 0.0038 0.0744 5.1 12.7
40..22 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
40..12 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
40..28 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
40..23 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
40..26 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
33..14 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
33..2 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
33..10 0.002 1317.8 170.2 0.0517 0.0002 0.0044 0.3 0.8
33..29 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
32..13 0.002 1317.8 170.2 0.0517 0.0002 0.0044 0.3 0.8
32..21 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
32..4 0.004 1317.8 170.2 0.0517 0.0005 0.0089 0.6 1.5
32..25 0.000 1317.8 170.2 0.0517 0.0000 0.0000 0.0 0.0
32..5 0.002 1317.8 170.2 0.0517 0.0002 0.0044 0.3 0.8
Time used: 33:57
Model 8: beta&w>1 (11 categories)
TREE # 1: (24, 9, ((((19, 3, 1, 6, 30, 8, 27, 16, 17), (((15, 7, (20, 11)), 18), (22, 12, 28, 23, 26))), 14, 2, 10, 29), 13, 21, 4, 25, 5)); MP score: 48
lnL(ntime: 39 np: 44): -2092.002936 +0.000000
31..24 31..9 31..32 32..33 33..34 34..35 35..19 35..3 35..1 35..6 35..30 35..8 35..27 35..16 35..17 34..36 36..37 37..38 38..15 38..7 38..39 39..20 39..11 37..18 36..40 40..22 40..12 40..28 40..23 40..26 33..14 33..2 33..10 33..29 32..13 32..21 32..4 32..25 32..5
0.000004 0.000004 0.004219 0.002093 0.005210 0.003193 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.002066 0.000004 0.000004 0.002671 0.009254 0.006866 0.004242 0.004252 0.004231 0.000004 0.000004 0.010876 0.036606 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.002094 0.000004 0.002091 0.000004 0.004195 0.000004 0.002102 27.944380 0.994927 3.409633 99.000000 3.863098
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.106349
(24: 0.000004, 9: 0.000004, ((((19: 0.000004, 3: 0.000004, 1: 0.000004, 6: 0.000004, 30: 0.000004, 8: 0.000004, 27: 0.002066, 16: 0.000004, 17: 0.000004): 0.003193, (((15: 0.004242, 7: 0.004252, (20: 0.000004, 11: 0.000004): 0.004231): 0.006866, 18: 0.010876): 0.009254, (22: 0.000004, 12: 0.000004, 28: 0.000004, 23: 0.000004, 26: 0.000004): 0.036606): 0.002671): 0.005210, 14: 0.000004, 2: 0.000004, 10: 0.002094, 29: 0.000004): 0.002093, 13: 0.002091, 21: 0.000004, 4: 0.004195, 25: 0.000004, 5: 0.002102): 0.004219);
(C1: 0.000004, C2: 0.000004, ((((C10: 0.000004, C11: 0.000004, C14: 0.000004, C15: 0.000004, C4: 0.000004, C5: 0.000004, C6: 0.002066, C7: 0.000004, C8: 0.000004): 0.003193, (((C12: 0.004242, C30: 0.004252, (C37: 0.000004, C38: 0.000004): 0.004231): 0.006866, C35: 0.010876): 0.009254, (C21: 0.000004, C22: 0.000004, C25: 0.000004, C26: 0.000004, C31: 0.000004): 0.036606): 0.002671): 0.005210, C16: 0.000004, C19: 0.000004, C33: 0.002094, C34: 0.000004): 0.002093, C18: 0.002091, C23: 0.000004, C24: 0.004195, C28: 0.000004, C9: 0.002102): 0.004219);
Detailed output identifying parameters
kappa (ts/tv) = 27.94438
Parameters in M8 (beta&w>1):
p0 = 0.99493 p = 3.40963 q = 99.00000
(p1 = 0.00507) w = 3.86310
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09949 0.09949 0.09949 0.09949 0.09949 0.09949 0.09949 0.09949 0.09949 0.09949 0.00507
w: 0.01027 0.01599 0.02030 0.02426 0.02823 0.03246 0.03724 0.04307 0.05112 0.06656 3.86310
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..24 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
31..9 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
31..32 0.004 1317.8 170.2 0.0524 0.0005 0.0087 0.6 1.5
32..33 0.002 1317.8 170.2 0.0524 0.0002 0.0043 0.3 0.7
33..34 0.005 1317.8 170.2 0.0524 0.0006 0.0108 0.7 1.8
34..35 0.003 1317.8 170.2 0.0524 0.0003 0.0066 0.5 1.1
35..19 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
35..3 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
35..1 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
35..6 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
35..30 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
35..8 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
35..27 0.002 1317.8 170.2 0.0524 0.0002 0.0043 0.3 0.7
35..16 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
35..17 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
34..36 0.003 1317.8 170.2 0.0524 0.0003 0.0055 0.4 0.9
36..37 0.009 1317.8 170.2 0.0524 0.0010 0.0192 1.3 3.3
37..38 0.007 1317.8 170.2 0.0524 0.0007 0.0142 1.0 2.4
38..15 0.004 1317.8 170.2 0.0524 0.0005 0.0088 0.6 1.5
38..7 0.004 1317.8 170.2 0.0524 0.0005 0.0088 0.6 1.5
38..39 0.004 1317.8 170.2 0.0524 0.0005 0.0088 0.6 1.5
39..20 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
39..11 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
37..18 0.011 1317.8 170.2 0.0524 0.0012 0.0225 1.6 3.8
36..40 0.037 1317.8 170.2 0.0524 0.0040 0.0759 5.2 12.9
40..22 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
40..12 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
40..28 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
40..23 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
40..26 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
33..14 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
33..2 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
33..10 0.002 1317.8 170.2 0.0524 0.0002 0.0043 0.3 0.7
33..29 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
32..13 0.002 1317.8 170.2 0.0524 0.0002 0.0043 0.3 0.7
32..21 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
32..4 0.004 1317.8 170.2 0.0524 0.0005 0.0087 0.6 1.5
32..25 0.000 1317.8 170.2 0.0524 0.0000 0.0000 0.0 0.0
32..5 0.002 1317.8 170.2 0.0524 0.0002 0.0044 0.3 0.7
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C14)
Pr(w>1) post mean +- SE for w
13 V 0.998** 3.855
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C14)
Pr(w>1) post mean +- SE for w
13 V 0.904 1.486 +- 0.431
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.000 0.000 0.005 0.027 0.099 0.271 0.598
ws: 0.938 0.053 0.007 0.001 0.000 0.000 0.000 0.000 0.000 0.000
Time used: 1:05:09
Model 1: NearlyNeutral -2092.511847 Model 2: PositiveSelection -2091.990462 Model 7: beta -2093.031572 Model 8: beta&w>1 -2092.002936 Model 2 vs 1 1.042770 Model 8 vs 7 2.057272
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
