--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -4959.36 -4997.74
2 -4960.26 -4999.29
--------------------------------------
TOTAL -4959.71 -4998.78
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.237748 0.007609 1.067722 1.405298 1.234601 1181.77 1213.79 1.000
r(A<->C){all} 0.098765 0.000239 0.069355 0.129029 0.098609 787.21 867.40 1.000
r(A<->G){all} 0.206776 0.000463 0.163288 0.248103 0.206106 654.49 781.78 1.000
r(A<->T){all} 0.094843 0.000201 0.067337 0.123734 0.094107 1018.52 1064.95 1.001
r(C<->G){all} 0.039740 0.000186 0.014744 0.066225 0.038741 677.03 685.73 1.001
r(C<->T){all} 0.435846 0.000857 0.381881 0.493293 0.435728 656.81 743.46 1.000
r(G<->T){all} 0.124030 0.000278 0.090023 0.154877 0.123026 979.04 994.88 1.002
pi(A){all} 0.299898 0.000138 0.276670 0.322060 0.299787 698.26 912.95 1.002
pi(C){all} 0.214679 0.000107 0.194596 0.234738 0.214545 825.50 1019.52 1.000
pi(G){all} 0.218498 0.000115 0.198131 0.239909 0.218304 698.57 767.02 1.000
pi(T){all} 0.266925 0.000116 0.246911 0.287920 0.266755 1032.85 1107.24 1.001
alpha{1,2} 0.236074 0.000948 0.179795 0.297236 0.233122 990.08 1196.90 1.000
alpha{3} 3.639522 1.679862 1.596930 6.172227 3.397841 1283.37 1283.86 1.000
pinvar{all} 0.074871 0.002079 0.000070 0.155808 0.070390 1219.84 1264.10 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -4232.072048
Model 2: PositiveSelection -4232.072048
Model 7: beta -4227.299939
Model 8: beta&w>1 -4224.586136
Model 2 vs 1 0
Model 8 vs 7 5.427606
-- Starting log on Fri Nov 04 00:59:59 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.22 sec, SCORE=1000, Nseq=43, Len=408
C1 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C2 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C3 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSDQPWKVIPRNLVPVNKKD
C4 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C5 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C6 MATVKWADASEPQRGRQSRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C7 MATVNWADESEQQRGRQGRIPYSVYSPLLVDSEQPWKVIPRNLVPINKKD
C8 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C9 MATVNWADASEPQRGRQSRIPYSLYSPLLVDNDQPWKVIPRNLVPTNKKD
C10 MATVNWADASEPQRGRQSRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C11 MATVNWADESEQPRGRQARIPYSLYRPLLVDSEQPWKVIPRNLVPTNKKD
C12 MASVNWADASEPQRGRSGRIPFSLYNPLLVENGQPWKVIPRDLVPTNKKE
C13 MATVSWADASEPRRGRSGRIPYSLYRPLLVDNDQPWKVIPRDLVPTNKGD
C14 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C15 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C16 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C17 MATVNWADFSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C18 MATVNWADFSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C19 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C20 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C21 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C22 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C23 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C24 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C25 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C26 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSDQPWKVIPRNLVPVNKKD
C27 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C28 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C29 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C30 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C31 MATVKWADAPEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C32 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C33 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C34 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C35 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C36 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C37 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C38 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C39 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C40 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C41 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C42 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C43 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
**:*.*** .* ***..***:*:* ****:. ********:*** ** :
C1 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C2 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C3 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C4 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C5 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C6 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C7 KDKLIGYWNIQKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERI--E
C8 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C9 KSKLIGYWNIQKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERI--E
C10 KSKLIGYWNIQKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERI--E
C11 KSKLIGYWNVQKRFRTRKGQRVDLPPKLHFYYLGTGPHQDAKFRDRR--E
C12 KDKLIGYWNVQKRFRTKKGQRVDLPPKVHFYYLGTGPHKESKFRERI--D
C13 KDKFVGYWNMQKRFRTRKGKKIFLPPKLHFYYLGTGPYPDAKFRERIADA
C14 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C15 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C16 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C17 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C18 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C19 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C20 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C21 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C22 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C23 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C24 KNKLIGYWNVQRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C25 KNKLIGYWNVQRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C26 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C27 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C28 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C29 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C30 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C31 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C32 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C33 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C34 KNKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C35 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C36 KNKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C37 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C38 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C39 KNKLIGYWNVQRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C40 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C41 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKAAKFRERV--E
C42 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C43 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
*.*::****:*:****:**::: *.**:*********: :***:*
C1 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C2 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C3 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVADEPDSRAP
C4 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C5 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C6 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C7 GVVWVAVDGAKTEPTGYGVRRKNLNPEEPRFSQALPNGVTVVEEPDSRAP
C8 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C9 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQALPNGVTVVEEPDSRAP
C10 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQALPNGVTVVEEPDSRAP
C11 GVIWVAIDGAKTEPTGYGVRRRNADPEEPRFNQNLPSGVSIVEEPDSRGP
C12 GVVWVAVNGAKTEPTGYGVRRKNADPETPKFNQKLPNGLSIVEDPDSRAT
C13 NIVWVAMNGAKTAPTGYGVRKRNAEPQTPKFNQELPEGVTIVEDVDSRGP
C14 GVVWVAVDGAKTEPTGYGVRRKNLDPEEPRFSQSLPNGVTVVEEPDSRAP
C15 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C16 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C17 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C18 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C19 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C20 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C21 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C22 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C23 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRVP
C24 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C25 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C26 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVADEPDSRAP
C27 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C28 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C29 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C30 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C31 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C32 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C33 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C34 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C35 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C36 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C37 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C38 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C39 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C40 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C41 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C42 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPLFSQSLPNGVTVVEEPDSRAP
C43 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
.::***::**** *******::* :*: * *.* **.*:::.:: *** .
C1 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C2 SRSQSRSQSRGRGE-SKPQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C3 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C4 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C5 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C6 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C7 SRSQSRSQSRGRGE-SKPQSRNSSSDR-----NQKSSQDDILKAVAAALK
C8 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C9 SRSQSRSQSRGRGE-SKPQSRNSSSDR-----NQKSSQDDIMKAVAAALK
C10 SRSQSRSQSRGRGE-SKPQSRNSSSDR-----NQKSSQDDIMKAVAAALK
C11 SRSQSRSQSRGRGA-SKPQSRNTSTER-----SQGSNQEDLLKAVAAALK
C12 SRSQSRSQSRDRGKNSKPQSRSSSTER-----P--QSQDDIMKAVAAALK
C13 SRSQSRNRSS-----SRPQSRNASNERLPKSNSKQSNQDDIMAAVAAALE
C14 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C15 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C16 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C17 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C18 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C19 SRSQSKSQSRGRGE-F----RNSSS----------ASQDDIMKAVAAALK
C20 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C21 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C22 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C23 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C24 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C25 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C26 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C27 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C28 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C29 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C30 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C31 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C32 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C33 SRSQSRSQSR-------IQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C34 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C35 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C36 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C37 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C38 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C39 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C40 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C41 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C42 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C43 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
*****:.:* *..*. .*:*:: ******:
C1 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C2 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQTSAKSLARSQSSETKE
C3 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C4 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C5 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C6 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C7 SLGFD-PQE--KAKKAAKKGTPKPSRNQSPVSSQTRAKSPARPQSSETKE
C8 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C9 SLGFEKPQE--KENKVAKKGTPKPSRNQSPAPSQTRAKSPARSQSSETKE
C10 SLGFEKPQE--KENKVAKKGTPKPSRNQSPAPSQTRAKSPARSQSSETKE
C11 SLGFEKPQE--KDQKKGRKSTPKPSRSQSPVANQSRSKSPARSASSD-KE
C12 SLGFEKPQE--PQQKK-KKATPKSSRSSSPAPVK------AQSSDAQSKE
C13 KLGFERPNDASQPQKKQNKGTPKPSRAQSPAP--SRSKSPGRLQNAEPKE
C14 SLGF----E--KEKEAVKKGTPKPSRNQSPASSQTRAKSPARPQNSETKE
C15 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQTRAKSPARPQNSETKE
C16 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKE
C17 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKE
C18 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKE
C19 SLGFDKPQE--KEKKAAKKVTPKPSRNQSPASSQTCAKSPARPQNSETKE
C20 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKE
C21 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C22 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C23 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C24 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C25 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C26 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C27 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C28 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C29 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETKE
C30 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETKE
C31 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C32 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETKE
C33 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C34 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C35 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C36 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C37 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C38 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C39 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C40 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C41 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPSSSQSAAKILARSQSSETKE
C42 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQTRAKSPARPQNSETKE
C43 SLGFEKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
.*** : :: .. ***.** .** . .: .:: **
C1 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C2 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C3 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C4 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C5 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C6 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C7 QKHELQKPRWKRQPNSDVTSNVTQCFGPRDLDHNFGSADVVANGVKAKGY
C8 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C9 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C10 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C11 QKHEMQKPRWKRQPNSDKTSNVTQCFGPRDFEHNFGNPELLANGVKAKGY
C12 QKHELQKPRWKRQPNSDKSSNVTQCFGPRDLEHNFGSADVVANGVKAKGY
C13 KKKELEKPRWKRQPNDELPSSVMYCFGPRDLDHNFGSDATIQKGVKAPNY
C14 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C15 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C16 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C17 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C18 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C19 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLYHNFGSAGVVANGVKAKGY
C20 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C21 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C22 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C23 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C24 QKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C25 QKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C26 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C27 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C28 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C29 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C30 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C31 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C32 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C33 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C34 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C35 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C36 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C37 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C38 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C39 QKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C40 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C41 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C42 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C43 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
:*:*::*********.: .*.* ****** ****. : :**** .*
C1 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C2 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C3 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C4 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C5 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C6 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C7 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTFTTRVTVPKDHPHLGKFLE
C8 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C9 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C10 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C11 PQFAELVPSTAAMLFDSHIDTKEEGESVVLTYTTRVKVPKDHPNLGKFLD
C12 PQFAELVPSTAAVLFDSHIDSKEAGDSVLLTFTTRVKVPKDHPHLGKFLE
C13 PQFAELVPSTAALLFDSHIDTKELGDSVLITYTHKVKVPKEHPNLGKFLN
C14 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C15 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C16 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C17 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C18 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C19 PQFAELVPSTAAMLFDSHIDFNESGNNVVLIYTTRVTVPKDHPHLGKFLE
C20 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C21 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C22 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C23 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C24 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C25 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C26 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C27 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C28 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C29 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C30 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C31 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C32 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C33 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C34 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C35 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C36 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C37 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C38 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C39 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C40 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C41 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C42 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C43 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
************:****** :* *:.*:: :* :*.***:**:*****:
C1 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C2 ELNAFT-----REMQQHPL---LNPSALEFNPSQTSPATAEPVRDEVSIE
C3 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C4 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C5 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C6 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C7 EINAFTKPSQVREMQQHPL---LNPSAQEFNPSQTSPAPAEPVYDEVAIE
C8 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C9 ELNAFTKPSQVREMQQHPL---LNPSAQEFNPSQTSPATVEPVYDEVAIE
C10 ELNAFTKPSQVREMQQHPL---LNPSAQEFNPSQTSPATVEPVYDEVAIE
C11 QLNAFTKPSSVKETQSHP----MNPAAPEFSP--IVPSNPEPIYDAVAME
C12 EINAFTKPSQVKETQQHPL---LNPAAQDFTPS-TSSSTVEPVYDEVALE
C13 EVNAFTKPSQVLLTQQHPIVPTLNPVAPEFNPTSSQP-KPEPIY-EVPTE
C14 ELNAFTKPSQ-GDMQQHPL---LNPSAQEFNPSQTSPGTVEPVYDAVSIE
C15 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C16 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C17 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C18 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C19 ELNAFTKPSQ-GEMQQHPL---LNPSAQEFNSLQTLPGTVESVYDAVAIE
C20 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C21 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C22 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C23 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C24 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C25 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C26 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C27 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C28 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C29 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C30 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C31 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C32 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C33 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C34 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C35 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C36 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C37 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C38 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C39 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C40 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C41 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C42 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C43 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
::**** *.:* :** * :: . *.: *. *
C1 TDIIDEVN
C2 TDIIDEVN
C3 TDIIDEVN
C4 TDIIDEVN
C5 TDIIDEVN
C6 TDIIDEVN
C7 TDIIDEVN
C8 TDIIDEVN
C9 TDIIDEVN
C10 TDIIDEVN
C11 TDIIDEVN
C12 TDIIDEVN
C13 IDIVDEVN
C14 TDIIDEVN
C15 TDIIDEVN
C16 TDIIDEVN
C17 TDIIDEVN
C18 TDIIDEVN
C19 TDIIDEVN
C20 TDIIDEVN
C21 TDIIDEVN
C22 TDIIDEVN
C23 TDIIDEVN
C24 TDIIDEVN
C25 TDIIDEVN
C26 TDIIDEVN
C27 TDIIDEVN
C28 TDIIDEVN
C29 TDIIDEVN
C30 TDIIDEVN
C31 TDIIDEVN
C32 TDIIDEVN
C33 TDIIDEVN
C34 TDIIDEVN
C35 TDIIDEVN
C36 TDIIDEVN
C37 TDIIDEVN
C38 TDIIDEVN
C39 TDIIDEVN
C40 TDIIDEVN
C41 TDIIDEVN
C42 TDIIDEVN
C43 TDIIDEVN
**:****
-- Starting log on Fri Nov 04 01:00:52 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=1.24 sec, SCORE=986, Nseq=43, Len=408
C1 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C2 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C3 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSDQPWKVIPRNLVPVNKKD
C4 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C5 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C6 MATVKWADASEPQRGRQSRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C7 MATVNWADESEQQRGRQGRIPYSVYSPLLVDSEQPWKVIPRNLVPINKKD
C8 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C9 MATVNWADASEPQRGRQSRIPYSLYSPLLVDNDQPWKVIPRNLVPTNKKD
C10 MATVNWADASEPQRGRQSRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C11 MATVNWADESEQPRGRQARIPYSLYRPLLVDSEQPWKVIPRNLVPTNKKD
C12 MASVNWADASEPQRGRSGRIPFSLYNPLLVENGQPWKVIPRDLVPTNKKE
C13 MATVSWADASEPRRGRSGRIPYSLYRPLLVDNDQPWKVIPRDLVPTNKGD
C14 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C15 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C16 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C17 MATVNWADFSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C18 MATVNWADFSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C19 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C20 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C21 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C22 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C23 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C24 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C25 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C26 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSDQPWKVIPRNLVPVNKKD
C27 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C28 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C29 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C30 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C31 MATVKWADAPEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C32 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C33 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C34 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C35 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C36 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C37 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C38 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C39 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C40 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C41 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C42 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C43 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
**:*.*** .* ***..***:*:* ****:. ********:*** ** :
C1 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C2 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C3 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C4 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C5 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C6 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C7 KDKLIGYWNIQKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERI--E
C8 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C9 KSKLIGYWNIQKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERI--E
C10 KSKLIGYWNIQKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERI--E
C11 KSKLIGYWNVQKRFRTRKGQRVDLPPKLHFYYLGTGPHQDAKFRDRR--E
C12 KDKLIGYWNVQKRFRTKKGQRVDLPPKVHFYYLGTGPHKESKFRERI--D
C13 KDKFVGYWNMQKRFRTRKGKKIFLPPKLHFYYLGTGPYPDAKFRERIADA
C14 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C15 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C16 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C17 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C18 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C19 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C20 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C21 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C22 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C23 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C24 KNKLIGYWNVQRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C25 KNKLIGYWNVQRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C26 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C27 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C28 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C29 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C30 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C31 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C32 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C33 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C34 KNKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C35 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C36 KNKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C37 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C38 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C39 KNKLIGYWNVQRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C40 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C41 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKAAKFRERV--E
C42 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C43 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
*.*::****:*:****:**::: *.**:*********: :***:*
C1 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C2 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C3 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVADEPDSRAP
C4 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C5 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C6 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C7 GVVWVAVDGAKTEPTGYGVRRKNLNPEEPRFSQALPNGVTVVEEPDSRAP
C8 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C9 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQALPNGVTVVEEPDSRAP
C10 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQALPNGVTVVEEPDSRAP
C11 GVIWVAIDGAKTEPTGYGVRRRNADPEEPRFNQNLPSGVSIVEEPDSRGP
C12 GVVWVAVNGAKTEPTGYGVRRKNADPETPKFNQKLPNGLSIVEDPDSRAT
C13 NIVWVAMNGAKTAPTGYGVRKRNAEPQTPKFNQELPEGVTIVEDVDSRGP
C14 GVVWVAVDGAKTEPTGYGVRRKNLDPEEPRFSQSLPNGVTVVEEPDSRAP
C15 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C16 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C17 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C18 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C19 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C20 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C21 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C22 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C23 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRVP
C24 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C25 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C26 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVADEPDSRAP
C27 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C28 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C29 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C30 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C31 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C32 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C33 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C34 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C35 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C36 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C37 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C38 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C39 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C40 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C41 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C42 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPLFSQSLPNGVTVVEEPDSRAP
C43 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
.::***::**** *******::* :*: * *.* **.*:::.:: *** .
C1 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C2 SRSQSRSQSRGRGE-SKPQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C3 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C4 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C5 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C6 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C7 SRSQSRSQSRGRGE-SKPQSRNSSSDR-----NQKSSQDDILKAVAAALK
C8 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C9 SRSQSRSQSRGRGE-SKPQSRNSSSDR-----NQKSSQDDIMKAVAAALK
C10 SRSQSRSQSRGRGE-SKPQSRNSSSDR-----NQKSSQDDIMKAVAAALK
C11 SRSQSRSQSRGRGA-SKPQSRNTSTER-----SQGSNQEDLLKAVAAALK
C12 SRSQSRSQSRDRGKNSKPQSRSSSTER-----P--QSQDDIMKAVAAALK
C13 SRSQSRNRSS-----SRPQSRNASNERLPKSNSKQSNQDDIMAAVAAALE
C14 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C15 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C16 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C17 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C18 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C19 SRSQSKSQSRGRGE-F----RNSSS----------ASQDDIMKAVAAALK
C20 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C21 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C22 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C23 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C24 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C25 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C26 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C27 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C28 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C29 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C30 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C31 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C32 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C33 SRSQSRSQSR-------IQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C34 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C35 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C36 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C37 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C38 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C39 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C40 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C41 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C42 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C43 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
*****:.:* *..*. .*:*:: ******:
C1 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C2 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQTSAKSLARSQSSETKE
C3 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C4 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C5 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C6 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C7 SLGFD-PQE--KAKKAAKKGTPKPSRNQSPVSSQTRAKSPARPQSSETKE
C8 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C9 SLGFEKPQE--KENKVAKKGTPKPSRNQSPAPSQTRAKSPARSQSSETKE
C10 SLGFEKPQE--KENKVAKKGTPKPSRNQSPAPSQTRAKSPARSQSSETKE
C11 SLGFEKPQE--KDQKKGRKSTPKPSRSQSPVANQSRSKSPARSASSD-KE
C12 SLGFEKPQE--PQQKK-KKATPKSSRSSSPAPVK------AQSSDAQSKE
C13 KLGFERPNDASQPQKKQNKGTPKPSRAQSPAP--SRSKSPGRLQNAEPKE
C14 SLGF----E--KEKEAVKKGTPKPSRNQSPASSQTRAKSPARPQNSETKE
C15 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQTRAKSPARPQNSETKE
C16 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKE
C17 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKE
C18 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKE
C19 SLGFDKPQE--KEKKAAKKVTPKPSRNQSPASSQTCAKSPARPQNSETKE
C20 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKE
C21 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C22 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C23 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C24 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C25 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C26 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C27 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C28 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C29 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETKE
C30 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETKE
C31 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C32 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETKE
C33 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C34 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C35 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C36 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C37 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C38 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C39 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C40 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C41 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPSSSQSAAKILARSQSSETKE
C42 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQTRAKSPARPQNSETKE
C43 SLGFEKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
.*** : :: .. ***.** .** . .: .:: **
C1 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C2 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C3 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C4 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C5 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C6 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C7 QKHELQKPRWKRQPNSDVTSNVTQCFGPRDLDHNFGSADVVANGVKAKGY
C8 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C9 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C10 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C11 QKHEMQKPRWKRQPNSDKTSNVTQCFGPRDFEHNFGNPELLANGVKAKGY
C12 QKHELQKPRWKRQPNSDKSSNVTQCFGPRDLEHNFGSADVVANGVKAKGY
C13 KKKELEKPRWKRQPNDELPSSVMYCFGPRDLDHNFGSDATIQKGVKAPNY
C14 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C15 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C16 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C17 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C18 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C19 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLYHNFGSAGVVANGVKAKGY
C20 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C21 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C22 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C23 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C24 QKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C25 QKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C26 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C27 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C28 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C29 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C30 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C31 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C32 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C33 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C34 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C35 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C36 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C37 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C38 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C39 QKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C40 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C41 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C42 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C43 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
:*:*::*********.: .*.* ****** ****. : :**** .*
C1 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C2 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C3 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C4 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C5 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C6 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C7 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTFTTRVTVPKDHPHLGKFLE
C8 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C9 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C10 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C11 PQFAELVPSTAAMLFDSHIDTKEEGESVVLTYTTRVKVPKDHPNLGKFLD
C12 PQFAELVPSTAAVLFDSHIDSKEAGDSVLLTFTTRVKVPKDHPHLGKFLE
C13 PQFAELVPSTAALLFDSHIDTKELGDSVLITYTHKVKVPKEHPNLGKFLN
C14 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C15 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C16 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C17 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C18 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C19 PQFAELVPSTAAMLFDSHIDFNESGNNVVLIYTTRVTVPKDHPHLGKFLE
C20 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C21 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C22 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C23 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C24 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C25 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C26 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C27 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C28 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C29 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C30 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C31 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C32 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C33 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C34 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C35 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C36 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C37 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C38 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C39 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C40 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C41 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C42 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C43 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
************:****** :* *:.*:: :* :*.***:**:*****:
C1 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C2 ELNAFT-----REMQQHPL---LNPSALEFNPSQTSPATAEPVRDEVSIE
C3 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C4 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C5 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C6 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C7 EINAFTKPSQVREMQQHPL---LNPSAQEFNPSQTSPAPAEPVYDEVAIE
C8 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C9 ELNAFTKPSQVREMQQHPL---LNPSAQEFNPSQTSPATVEPVYDEVAIE
C10 ELNAFTKPSQVREMQQHPL---LNPSAQEFNPSQTSPATVEPVYDEVAIE
C11 QLNAFTKPSSVKETQSHP----MNPAAPEFSP--IVPSNPEPIYDAVAME
C12 EINAFTKPSQVKETQQHPL---LNPAAQDFTPS-TSSSTVEPVYDEVALE
C13 EVNAFTKPSQVLLTQQHPIVPTLNPVAPEFNPTSSQP-KPEPIY-EVPTE
C14 ELNAFTKPSQ-GDMQQHPL---LNPSAQEFNPSQTSPGTVEPVYDAVSIE
C15 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C16 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C17 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C18 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C19 ELNAFTKPSQ-GEMQQHPL---LNPSAQEFNSLQTLPGTVESVYDAVAIE
C20 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C21 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C22 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C23 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C24 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C25 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C26 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C27 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C28 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C29 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C30 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C31 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C32 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C33 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C34 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C35 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C36 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C37 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C38 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C39 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C40 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C41 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C42 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C43 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
::**** *.:* :** * :: . *.: *. *
C1 TDIIDEVN
C2 TDIIDEVN
C3 TDIIDEVN
C4 TDIIDEVN
C5 TDIIDEVN
C6 TDIIDEVN
C7 TDIIDEVN
C8 TDIIDEVN
C9 TDIIDEVN
C10 TDIIDEVN
C11 TDIIDEVN
C12 TDIIDEVN
C13 IDIVDEVN
C14 TDIIDEVN
C15 TDIIDEVN
C16 TDIIDEVN
C17 TDIIDEVN
C18 TDIIDEVN
C19 TDIIDEVN
C20 TDIIDEVN
C21 TDIIDEVN
C22 TDIIDEVN
C23 TDIIDEVN
C24 TDIIDEVN
C25 TDIIDEVN
C26 TDIIDEVN
C27 TDIIDEVN
C28 TDIIDEVN
C29 TDIIDEVN
C30 TDIIDEVN
C31 TDIIDEVN
C32 TDIIDEVN
C33 TDIIDEVN
C34 TDIIDEVN
C35 TDIIDEVN
C36 TDIIDEVN
C37 TDIIDEVN
C38 TDIIDEVN
C39 TDIIDEVN
C40 TDIIDEVN
C41 TDIIDEVN
C42 TDIIDEVN
C43 TDIIDEVN
**:****
-- Starting log on Fri Nov 04 01:51:23 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E.result/gapped_alignment/codeml,229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 30 taxa and 1224 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C11
Taxon 3 -> C12
Taxon 4 -> C14
Taxon 5 -> C15
Taxon 6 -> C17
Taxon 7 -> C18
Taxon 8 -> C19
Taxon 9 -> C2
Taxon 10 -> C20
Taxon 11 -> C21
Taxon 12 -> C22
Taxon 13 -> C24
Taxon 14 -> C25
Taxon 15 -> C27
Taxon 16 -> C29
Taxon 17 -> C3
Taxon 18 -> C31
Taxon 19 -> C32
Taxon 20 -> C33
Taxon 21 -> C34
Taxon 22 -> C36
Taxon 23 -> C39
Taxon 24 -> C4
Taxon 25 -> C42
Taxon 26 -> C5
Taxon 27 -> C6
Taxon 28 -> C7
Taxon 29 -> C8
Taxon 30 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1667526685
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 278220105
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 6800219872
Seed = 1524247465
Swapseed = 1667526685
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 97 unique site patterns
Division 2 has 90 unique site patterns
Division 3 has 199 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -9578.873233 -- 82.122948
Chain 2 -- -10468.330267 -- 82.122948
Chain 3 -- -11088.555432 -- 82.122948
Chain 4 -- -9830.728137 -- 82.122948
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -10694.128939 -- 82.122948
Chain 2 -- -10900.411158 -- 82.122948
Chain 3 -- -10582.443366 -- 82.122948
Chain 4 -- -10850.481296 -- 82.122948
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-9578.873] (-10468.330) (-11088.555) (-9830.728) * [-10694.129] (-10900.411) (-10582.443) (-10850.481)
1000 -- (-5591.119) (-5527.272) (-5587.461) [-5325.258] * (-5572.858) (-5545.832) [-5423.982] (-5507.858) -- 0:33:18
2000 -- (-5173.899) (-5052.404) (-5096.733) [-5021.335] * (-5076.254) (-5129.156) (-5073.047) [-5045.103] -- 0:33:16
3000 -- (-5076.107) [-4988.110] (-5010.438) (-4996.727) * (-5004.659) (-5037.525) [-4989.954] (-4996.649) -- 0:33:14
4000 -- (-5013.545) (-4975.192) (-5007.778) [-4974.417] * (-4987.513) (-5002.676) (-5007.428) [-4979.944] -- 0:37:21
5000 -- (-4975.119) (-4990.883) [-4973.779] (-4968.437) * (-4970.731) (-4986.759) (-4979.300) [-4972.455] -- 0:36:29
Average standard deviation of split frequencies: 0.066480
6000 -- [-4978.336] (-4977.835) (-4985.919) (-4964.643) * (-4982.120) (-4977.873) [-4976.376] (-4971.919) -- 0:35:53
7000 -- (-4968.030) (-4995.899) [-4983.628] (-4980.701) * (-4997.835) [-4969.629] (-4977.081) (-4979.516) -- 0:35:27
8000 -- (-4984.934) (-4993.655) [-4965.640] (-4982.362) * (-4968.476) [-4977.431] (-4974.011) (-4978.428) -- 0:35:08
9000 -- (-4980.862) (-4995.197) (-4966.431) [-4971.725] * (-4977.705) (-4986.362) (-5005.441) [-4968.367] -- 0:34:52
10000 -- (-4974.906) (-4975.914) [-4978.535] (-4994.265) * (-4969.400) (-4978.805) (-5017.408) [-4970.808] -- 0:34:39
Average standard deviation of split frequencies: 0.077153
11000 -- [-4962.221] (-4977.216) (-4981.898) (-4979.848) * (-4986.753) (-4988.620) [-4980.986] (-4977.093) -- 0:34:27
12000 -- [-4982.224] (-4973.445) (-4968.093) (-4985.187) * [-4969.007] (-4987.791) (-4996.590) (-4978.046) -- 0:34:18
13000 -- (-4981.162) [-4984.129] (-4976.094) (-4978.705) * (-4996.808) (-4982.316) [-4982.230] (-4973.310) -- 0:34:09
14000 -- (-4973.533) [-4967.359] (-4972.235) (-4975.476) * (-4987.319) [-4971.021] (-4997.778) (-4976.063) -- 0:34:02
15000 -- (-4966.597) [-4979.213] (-4981.225) (-4965.978) * [-4978.698] (-4982.107) (-4984.681) (-4963.306) -- 0:33:55
Average standard deviation of split frequencies: 0.054190
16000 -- (-4985.340) (-4988.656) (-4971.320) [-4985.731] * (-4964.008) (-5003.728) [-4965.841] (-4985.752) -- 0:33:49
17000 -- (-4990.936) (-4973.379) [-4977.055] (-4986.852) * (-4982.612) (-5008.598) (-4973.771) [-4962.178] -- 0:33:43
18000 -- (-4981.701) (-4978.133) [-4970.092] (-4982.093) * (-4978.622) (-4986.966) [-4978.760] (-4968.216) -- 0:33:38
19000 -- (-4982.163) (-4980.762) [-4980.036] (-4979.982) * [-4981.736] (-4990.715) (-5001.932) (-4975.811) -- 0:34:25
20000 -- (-4978.919) (-4983.770) (-4977.670) [-4972.899] * (-4984.549) (-4984.866) (-4996.608) [-4969.929] -- 0:34:18
Average standard deviation of split frequencies: 0.055573
21000 -- (-4979.952) [-4976.985] (-4976.476) (-4974.783) * (-4999.178) [-4976.736] (-4977.226) (-4972.256) -- 0:34:11
22000 -- (-4979.218) (-4967.974) (-4965.985) [-4971.058] * (-4984.969) (-4972.963) [-4980.689] (-4980.813) -- 0:34:04
23000 -- [-4978.132] (-4978.648) (-4975.182) (-4983.100) * (-4961.630) [-4978.496] (-5004.564) (-4980.874) -- 0:33:58
24000 -- (-4987.260) [-4982.707] (-4993.133) (-4975.050) * (-4993.161) [-4980.504] (-4976.867) (-4991.283) -- 0:33:53
25000 -- (-4975.185) [-4970.981] (-4983.981) (-4990.902) * (-4971.486) [-4973.007] (-4982.021) (-4982.219) -- 0:33:47
Average standard deviation of split frequencies: 0.050091
26000 -- (-4990.644) [-4983.669] (-4989.221) (-4981.717) * (-4977.400) [-4971.640] (-4980.225) (-4978.452) -- 0:33:42
27000 -- [-4974.577] (-4979.571) (-5005.655) (-4962.908) * [-4978.875] (-4977.117) (-4985.324) (-4979.803) -- 0:34:14
28000 -- (-4975.625) [-4975.126] (-4980.279) (-4974.806) * (-4979.152) (-4976.965) [-4965.295] (-4984.075) -- 0:34:08
29000 -- [-4979.601] (-4987.943) (-4983.831) (-4977.705) * (-4976.900) (-4990.654) [-4979.834] (-4985.643) -- 0:34:02
30000 -- (-4992.662) (-4987.701) [-4984.770] (-4985.375) * [-4972.595] (-4993.143) (-4992.968) (-4993.496) -- 0:33:56
Average standard deviation of split frequencies: 0.032222
31000 -- (-4980.044) (-5000.936) (-5015.403) [-4973.020] * (-4979.903) (-4988.816) (-4987.961) [-4971.814] -- 0:33:51
32000 -- (-4989.193) [-4958.283] (-5000.761) (-4971.657) * (-4978.770) (-4994.393) (-4979.496) [-4979.426] -- 0:33:46
33000 -- (-4989.879) [-4980.311] (-4983.472) (-4969.528) * (-4998.938) (-5005.900) [-4980.547] (-4988.270) -- 0:33:41
34000 -- (-4986.974) (-4983.492) (-4973.699) [-4966.985] * (-5000.015) [-4983.016] (-4978.456) (-4982.882) -- 0:33:37
35000 -- (-4986.755) (-4976.272) (-4982.824) [-4980.986] * (-5000.885) [-4962.274] (-4978.619) (-4980.348) -- 0:34:00
Average standard deviation of split frequencies: 0.029594
36000 -- (-4984.304) [-4970.261] (-4979.532) (-4975.633) * (-4994.811) [-4975.089] (-4980.859) (-4966.081) -- 0:33:55
37000 -- (-4990.033) [-4973.590] (-4994.066) (-4985.442) * (-4987.339) [-4965.382] (-4975.366) (-4982.944) -- 0:33:50
38000 -- [-4967.870] (-4965.033) (-4973.209) (-4982.701) * (-4988.198) [-4973.192] (-5001.012) (-4973.043) -- 0:33:45
39000 -- (-4981.284) (-4983.589) (-4992.110) [-4968.946] * (-4981.508) [-4972.262] (-4990.088) (-4984.977) -- 0:33:40
40000 -- (-4969.622) [-4986.217] (-4978.895) (-4979.348) * [-4963.663] (-4970.227) (-4994.590) (-4980.566) -- 0:33:35
Average standard deviation of split frequencies: 0.022256
41000 -- (-4977.523) (-4998.069) (-4998.149) [-4976.673] * (-4973.694) [-4973.656] (-4989.444) (-4972.232) -- 0:33:54
42000 -- (-4969.441) (-4996.923) (-4984.074) [-4982.095] * (-4987.119) [-4973.563] (-5011.392) (-4991.299) -- 0:33:50
43000 -- (-4981.721) (-4974.347) [-4980.661] (-4996.355) * [-4974.446] (-4990.761) (-4972.374) (-4983.453) -- 0:33:45
44000 -- (-4986.294) (-4991.341) [-4973.655] (-4999.917) * (-4988.453) [-4975.286] (-4999.383) (-4979.837) -- 0:33:40
45000 -- [-4989.829] (-5000.018) (-4977.791) (-4966.535) * (-4982.075) (-4988.066) (-4988.112) [-4979.732] -- 0:33:36
Average standard deviation of split frequencies: 0.027576
46000 -- (-4990.938) (-4991.848) [-4961.309] (-4972.615) * (-4990.604) (-4986.570) (-4986.088) [-4981.346] -- 0:33:31
47000 -- (-4990.991) (-4974.465) [-4977.482] (-4977.824) * (-4971.243) [-4975.253] (-4978.422) (-4993.168) -- 0:33:27
48000 -- (-4999.221) [-4965.782] (-4979.955) (-4980.326) * [-4972.317] (-4956.876) (-4979.470) (-4990.354) -- 0:33:23
49000 -- (-4978.546) (-4974.093) (-4990.995) [-4966.596] * [-4979.594] (-4999.768) (-4980.614) (-4987.780) -- 0:33:19
50000 -- (-4975.254) (-4977.865) (-4996.223) [-4973.953] * [-4968.733] (-4989.398) (-4988.498) (-4972.243) -- 0:33:14
Average standard deviation of split frequencies: 0.028263
51000 -- (-4966.260) [-4959.743] (-4992.816) (-4993.624) * (-4990.057) [-4971.905] (-4985.172) (-4974.546) -- 0:33:11
52000 -- (-4964.531) (-4977.126) (-4999.600) [-4984.836] * [-4976.091] (-4983.632) (-4981.830) (-4980.059) -- 0:33:07
53000 -- (-4976.359) (-4977.093) (-4981.761) [-4981.089] * (-4985.816) (-4983.253) [-4968.144] (-4972.862) -- 0:33:03
54000 -- (-4968.917) (-4994.651) (-4985.044) [-4971.507] * (-4979.658) [-4975.063] (-4982.526) (-4974.373) -- 0:32:59
55000 -- [-4970.730] (-4993.921) (-4982.274) (-4974.438) * [-4965.027] (-4977.136) (-4981.748) (-4976.946) -- 0:32:55
Average standard deviation of split frequencies: 0.031529
56000 -- (-4999.283) (-4991.429) [-4979.384] (-4984.527) * (-4983.062) (-4971.476) (-4976.641) [-4968.560] -- 0:32:52
57000 -- [-4960.432] (-4988.387) (-4976.200) (-4974.731) * [-4964.687] (-4982.848) (-4998.618) (-4980.612) -- 0:32:48
58000 -- (-4966.958) (-4983.109) (-4970.313) [-4977.880] * (-4986.274) (-4979.153) (-4971.069) [-4983.311] -- 0:32:45
59000 -- [-4965.301] (-4988.458) (-4981.294) (-4974.931) * (-4996.934) (-4981.618) [-4987.899] (-4983.484) -- 0:32:57
60000 -- (-4976.104) (-4980.864) (-4975.619) [-4962.490] * (-4984.710) (-4984.563) (-4966.048) [-4967.372] -- 0:32:53
Average standard deviation of split frequencies: 0.029951
61000 -- (-4971.877) (-4990.736) (-4980.563) [-4975.642] * (-4973.288) [-4966.431] (-4971.511) (-4973.886) -- 0:32:50
62000 -- (-4980.906) (-4963.905) [-4973.772] (-4987.217) * [-4984.666] (-4975.116) (-4972.122) (-4976.363) -- 0:32:46
63000 -- [-4980.230] (-4967.521) (-4991.455) (-4985.748) * (-4979.994) (-4980.932) [-4961.301] (-4971.805) -- 0:32:43
64000 -- (-4995.158) [-4963.224] (-4984.575) (-4983.278) * (-4991.718) [-4974.617] (-4970.778) (-4976.721) -- 0:32:39
65000 -- [-4976.361] (-4971.410) (-4979.324) (-4982.111) * (-4983.608) (-4978.418) [-4979.220] (-4983.206) -- 0:32:36
Average standard deviation of split frequencies: 0.030663
66000 -- (-4983.691) (-4986.762) (-4971.042) [-4981.345] * (-4989.097) [-4981.130] (-4974.878) (-4980.556) -- 0:32:32
67000 -- [-4980.525] (-4978.395) (-4966.847) (-4989.012) * (-4972.133) (-4996.360) (-4976.035) [-4980.470] -- 0:32:43
68000 -- (-4978.714) (-4993.375) (-4984.367) [-4982.549] * [-4965.314] (-4997.683) (-4967.779) (-4991.871) -- 0:32:39
69000 -- (-4994.198) (-4980.701) [-4973.193] (-4992.650) * (-4978.990) [-4968.736] (-4983.365) (-5008.117) -- 0:32:36
70000 -- (-4989.446) (-4977.557) (-4970.999) [-4989.636] * [-4979.227] (-4970.180) (-4988.134) (-4993.123) -- 0:32:32
Average standard deviation of split frequencies: 0.032163
71000 -- (-4971.488) (-4984.737) [-4964.293] (-4990.826) * [-4985.412] (-4994.398) (-4970.073) (-4978.714) -- 0:32:29
72000 -- [-4977.178] (-4985.981) (-4990.611) (-4990.279) * (-5001.080) (-4971.232) (-4997.584) [-4974.487] -- 0:32:26
73000 -- [-4979.266] (-4994.339) (-4985.204) (-4989.204) * (-4985.776) [-4973.130] (-4990.389) (-4985.182) -- 0:32:22
74000 -- (-4984.507) (-4995.521) [-4979.989] (-4980.361) * (-4974.659) (-4976.492) (-4979.467) [-4968.466] -- 0:32:19
75000 -- (-4990.624) (-4979.099) [-4981.178] (-4980.449) * [-4968.037] (-4990.052) (-4999.680) (-4989.352) -- 0:32:28
Average standard deviation of split frequencies: 0.033833
76000 -- [-4965.207] (-5003.517) (-4988.699) (-4980.322) * (-4970.584) [-4980.773] (-4978.377) (-4982.602) -- 0:32:25
77000 -- [-4964.062] (-4990.784) (-4982.745) (-4970.543) * (-4972.741) (-4986.014) (-4995.977) [-4978.704] -- 0:32:21
78000 -- (-4971.511) (-4975.377) (-5013.738) [-4971.924] * (-5005.071) [-4985.727] (-4976.482) (-4985.049) -- 0:32:18
79000 -- [-4978.329] (-4980.233) (-4982.162) (-4977.109) * (-4987.781) [-4965.311] (-4973.173) (-4977.573) -- 0:32:15
80000 -- (-4980.194) (-4971.418) (-4973.306) [-4972.047] * (-4988.607) [-4977.842] (-4973.287) (-4988.617) -- 0:32:11
Average standard deviation of split frequencies: 0.031344
81000 -- [-4967.130] (-4970.459) (-4996.474) (-4992.043) * (-4990.021) [-4975.788] (-4991.699) (-4975.553) -- 0:32:08
82000 -- (-4965.533) (-4990.258) [-4987.967] (-4994.981) * (-4984.964) (-4963.639) [-4979.916] (-4976.085) -- 0:32:05
83000 -- [-4960.133] (-4991.391) (-4971.649) (-4994.982) * (-4992.819) (-4990.008) [-4982.750] (-4981.635) -- 0:32:02
84000 -- [-4963.654] (-4968.906) (-4976.535) (-4984.193) * (-4985.086) (-4978.220) [-4987.053] (-4968.662) -- 0:32:10
85000 -- (-4971.854) [-4974.069] (-4980.687) (-4981.714) * (-4983.904) (-4987.103) (-4987.500) [-4975.402] -- 0:32:06
Average standard deviation of split frequencies: 0.031518
86000 -- [-4951.804] (-4979.737) (-4983.982) (-4989.993) * (-4973.214) (-4979.081) [-4981.466] (-4988.926) -- 0:32:03
87000 -- (-4990.692) (-4972.693) (-4981.945) [-4981.083] * (-4979.322) (-4978.946) (-4967.115) [-4975.857] -- 0:32:00
88000 -- (-4998.603) (-4972.572) [-4976.840] (-4978.148) * (-4985.925) (-4990.475) [-4976.531] (-4976.450) -- 0:31:57
89000 -- (-4986.359) (-4971.877) (-4988.623) [-4968.788] * (-4992.390) (-4981.056) [-4967.844] (-4983.379) -- 0:31:54
90000 -- (-4982.905) [-4969.696] (-4979.887) (-4995.610) * (-4980.577) (-4973.697) [-4977.794] (-4970.292) -- 0:31:50
Average standard deviation of split frequencies: 0.031289
91000 -- [-4968.661] (-4988.797) (-4967.145) (-4987.080) * (-4978.863) (-4966.074) (-4979.350) [-4985.184] -- 0:31:47
92000 -- (-4971.544) (-4983.401) (-4984.667) [-4976.183] * [-4964.295] (-4983.768) (-4965.795) (-4984.010) -- 0:31:44
93000 -- [-4970.992] (-4969.375) (-4977.415) (-4974.339) * (-4978.127) [-4971.139] (-4963.353) (-4986.670) -- 0:31:41
94000 -- (-4993.633) [-4968.016] (-4986.298) (-4972.833) * (-4976.472) (-4983.091) [-4963.746] (-4986.773) -- 0:31:38
95000 -- (-4989.222) (-4968.783) (-4975.091) [-4962.231] * (-4975.328) (-4989.132) (-4975.777) [-4974.264] -- 0:31:35
Average standard deviation of split frequencies: 0.029374
96000 -- [-4977.388] (-4968.452) (-4984.633) (-4963.685) * [-4974.906] (-4981.564) (-4983.257) (-4979.492) -- 0:31:32
97000 -- (-4975.200) (-4987.642) [-4981.602] (-4989.579) * (-4996.315) (-4980.978) [-4972.951] (-4966.667) -- 0:31:39
98000 -- (-4972.115) (-4970.337) [-4970.592] (-4989.132) * (-4980.344) (-4983.184) (-4972.580) [-4969.066] -- 0:31:36
99000 -- (-4988.150) [-4967.385] (-4961.141) (-4978.701) * (-4980.985) (-4995.273) (-4987.877) [-4977.085] -- 0:31:33
100000 -- (-4995.240) [-4970.745] (-4967.363) (-4978.723) * (-4966.788) (-4976.671) (-4977.943) [-4973.854] -- 0:31:29
Average standard deviation of split frequencies: 0.030483
101000 -- (-4986.591) (-4991.839) (-4991.222) [-4975.838] * [-4971.648] (-4969.490) (-4977.640) (-4997.582) -- 0:31:27
102000 -- (-4985.557) [-4977.250] (-4986.442) (-4994.065) * (-4981.409) [-4976.490] (-4971.022) (-4985.445) -- 0:31:32
103000 -- (-4993.572) (-4971.202) (-4975.877) [-4968.418] * (-4964.644) [-4986.779] (-4985.097) (-4977.217) -- 0:31:29
104000 -- (-4989.695) (-4987.252) [-4982.240] (-4976.205) * (-4976.984) (-4973.466) (-4977.339) [-4974.656] -- 0:31:26
105000 -- (-4974.486) (-4980.426) [-4978.343] (-4966.390) * (-4983.760) (-4984.927) [-4976.448] (-4992.106) -- 0:31:23
Average standard deviation of split frequencies: 0.029483
106000 -- (-4981.941) (-4984.605) [-4988.559] (-4974.130) * (-4978.058) (-4979.441) [-4970.053] (-4979.099) -- 0:31:20
107000 -- (-4991.917) (-4978.136) [-4967.268] (-4984.155) * [-4978.241] (-5009.416) (-4977.747) (-4982.836) -- 0:31:26
108000 -- (-4989.746) (-4968.764) [-4964.345] (-4986.906) * [-4970.181] (-5000.404) (-4972.318) (-4981.242) -- 0:31:23
109000 -- (-4980.947) [-4973.387] (-4973.283) (-4988.913) * [-4968.376] (-5010.683) (-4969.594) (-4983.399) -- 0:31:20
110000 -- [-4971.243] (-4975.894) (-4974.252) (-4994.541) * [-4985.140] (-4978.426) (-4974.549) (-4980.497) -- 0:31:17
Average standard deviation of split frequencies: 0.026952
111000 -- (-4981.315) [-4963.901] (-5004.014) (-4984.160) * (-5000.619) (-4985.429) (-4971.506) [-4965.933] -- 0:31:14
112000 -- [-4972.084] (-4977.284) (-4985.206) (-4970.743) * (-4992.854) (-4989.222) [-4964.185] (-4984.097) -- 0:31:11
113000 -- [-4973.924] (-4978.585) (-4977.464) (-4979.155) * [-4974.500] (-4975.282) (-4967.537) (-4983.780) -- 0:31:08
114000 -- (-4990.204) [-4983.686] (-4970.698) (-4986.024) * [-4972.128] (-4976.480) (-4978.802) (-4975.950) -- 0:31:13
115000 -- [-4961.824] (-4982.454) (-4998.433) (-4993.698) * [-4973.608] (-4985.468) (-4975.277) (-4981.614) -- 0:31:10
Average standard deviation of split frequencies: 0.027663
116000 -- [-4983.063] (-4981.715) (-4986.030) (-4991.428) * (-5004.783) (-4980.489) [-4973.732] (-4995.382) -- 0:31:07
117000 -- (-4975.646) [-4966.465] (-4974.152) (-4980.965) * (-4995.325) (-4994.407) [-4967.874] (-4982.928) -- 0:31:04
118000 -- (-4984.766) [-4965.115] (-4976.610) (-4976.746) * (-4981.543) (-4980.288) [-4963.648] (-4978.261) -- 0:31:01
119000 -- (-4989.485) [-4971.717] (-4965.717) (-4994.482) * (-4982.976) (-4997.320) (-4979.615) [-4972.935] -- 0:30:58
120000 -- (-4997.557) [-4968.646] (-4978.227) (-4981.545) * (-4986.637) (-4970.369) [-4959.433] (-4977.091) -- 0:30:55
Average standard deviation of split frequencies: 0.026875
121000 -- (-4984.257) (-4974.466) [-4976.750] (-4980.972) * (-4983.298) (-4981.932) (-4989.298) [-4972.137] -- 0:30:52
122000 -- (-5005.039) [-4970.970] (-4982.947) (-4977.584) * (-4982.725) (-4995.366) (-4982.715) [-4972.824] -- 0:30:49
123000 -- (-4998.169) (-4981.425) [-4976.899] (-4963.289) * [-4982.962] (-5000.627) (-4972.050) (-4977.895) -- 0:30:46
124000 -- (-4985.102) (-4972.937) (-4978.553) [-4974.879] * [-4972.317] (-4978.895) (-4967.263) (-4981.926) -- 0:30:50
125000 -- (-4980.418) [-4967.358] (-4996.605) (-4994.841) * (-4984.309) (-4991.671) [-4980.813] (-4969.425) -- 0:30:48
Average standard deviation of split frequencies: 0.024256
126000 -- (-4987.110) (-4988.320) [-4979.173] (-4996.927) * (-4993.009) (-4974.139) (-4987.703) [-4973.452] -- 0:30:45
127000 -- [-4981.020] (-4977.613) (-4982.433) (-4987.838) * (-4974.905) [-4968.047] (-4992.501) (-4984.299) -- 0:30:42
128000 -- [-4978.421] (-4995.899) (-4992.200) (-4977.419) * (-4977.597) (-4965.568) (-5004.660) [-4957.685] -- 0:30:39
129000 -- [-4971.904] (-4995.564) (-4998.456) (-4967.082) * (-4995.400) (-4984.030) [-4979.171] (-4967.880) -- 0:30:36
130000 -- [-4974.894] (-4975.456) (-4998.670) (-4972.156) * [-4972.313] (-4975.227) (-4978.881) (-4979.254) -- 0:30:33
Average standard deviation of split frequencies: 0.023386
131000 -- (-4985.222) (-4975.930) (-4984.149) [-4968.610] * (-4980.209) (-4983.424) [-4994.517] (-4989.638) -- 0:30:30
132000 -- [-4978.275] (-4982.821) (-4987.054) (-4980.889) * (-4982.763) [-4963.859] (-4962.723) (-4995.716) -- 0:30:28
133000 -- (-4979.358) [-4964.870] (-4972.381) (-4990.688) * (-4982.412) (-4990.793) (-4972.307) [-4969.378] -- 0:30:25
134000 -- (-4977.031) (-4987.777) [-4970.403] (-4983.598) * (-4970.220) (-4989.995) (-4974.949) [-4976.566] -- 0:30:22
135000 -- [-4964.107] (-4983.795) (-4988.022) (-4973.560) * (-4975.802) (-4995.958) (-4988.258) [-4977.339] -- 0:30:26
Average standard deviation of split frequencies: 0.022622
136000 -- (-4985.075) (-4983.987) [-4988.956] (-4992.428) * [-4967.570] (-4984.278) (-4983.804) (-4979.977) -- 0:30:23
137000 -- (-4988.097) (-4975.821) [-4978.152] (-4984.557) * (-4969.640) (-4974.400) (-4982.180) [-4967.093] -- 0:30:20
138000 -- (-4969.696) (-4985.890) [-4975.494] (-4975.767) * (-4983.846) (-4976.979) [-4973.532] (-4981.687) -- 0:30:17
139000 -- (-4976.373) (-4976.182) (-4973.604) [-4980.199] * (-4986.000) (-4973.998) [-4983.188] (-4969.246) -- 0:30:14
140000 -- (-4969.177) [-4970.115] (-4987.170) (-4980.746) * [-4967.444] (-4984.072) (-4995.247) (-4985.604) -- 0:30:12
Average standard deviation of split frequencies: 0.021962
141000 -- [-4968.565] (-4966.365) (-4981.490) (-4982.073) * (-4964.218) (-4979.420) (-4974.377) [-4980.108] -- 0:30:09
142000 -- [-4966.003] (-4964.006) (-4976.490) (-4996.372) * (-4974.809) [-4965.999] (-4973.355) (-4991.539) -- 0:30:06
143000 -- (-4965.704) (-4975.802) [-4981.222] (-4979.305) * [-4965.035] (-4992.788) (-4971.117) (-4986.761) -- 0:30:09
144000 -- (-4984.954) (-4970.442) [-4975.892] (-4968.269) * (-4971.352) (-4986.029) [-4973.074] (-4979.162) -- 0:30:07
145000 -- (-4974.793) [-4984.069] (-4997.985) (-4986.730) * (-4994.010) (-4974.613) (-4975.690) [-4976.193] -- 0:30:04
Average standard deviation of split frequencies: 0.023993
146000 -- [-4975.163] (-4974.126) (-4990.397) (-4975.226) * (-4971.778) (-4979.806) (-4974.276) [-4975.633] -- 0:30:01
147000 -- (-4990.468) (-4968.236) [-4969.049] (-4985.705) * (-4974.468) (-4998.859) (-4991.093) [-4986.596] -- 0:29:58
148000 -- (-4986.054) (-5004.644) (-4970.444) [-4983.675] * (-4997.334) (-4978.234) [-4978.855] (-4980.179) -- 0:29:56
149000 -- (-4999.480) (-4987.367) [-4973.070] (-4998.204) * (-4983.105) (-4977.178) [-4973.418] (-4969.349) -- 0:29:53
150000 -- (-4977.317) (-4977.955) (-4975.528) [-4968.751] * (-4988.675) (-4982.200) [-4967.798] (-4967.634) -- 0:29:50
Average standard deviation of split frequencies: 0.024136
151000 -- (-4983.684) (-4987.576) (-4990.482) [-4964.728] * (-4989.288) (-4985.367) [-4976.607] (-4979.471) -- 0:29:47
152000 -- (-4985.109) (-4981.043) (-4982.885) [-4979.227] * (-4982.339) [-4968.528] (-4977.685) (-4973.671) -- 0:29:50
153000 -- [-4977.207] (-4996.992) (-4996.048) (-4967.034) * (-4977.117) [-4967.013] (-4974.747) (-4978.591) -- 0:29:48
154000 -- (-4977.333) (-4977.042) (-4995.346) [-4965.211] * (-4970.620) (-4978.377) [-4971.644] (-4975.343) -- 0:29:45
155000 -- (-4984.732) [-4983.858] (-4968.589) (-4979.339) * [-4964.767] (-4976.737) (-4969.445) (-4989.354) -- 0:29:42
Average standard deviation of split frequencies: 0.022690
156000 -- (-4984.861) [-4972.230] (-4990.583) (-4968.373) * (-4982.498) (-4975.312) [-4975.929] (-4981.979) -- 0:29:39
157000 -- (-4981.787) (-4992.683) (-4998.295) [-4956.351] * (-4978.244) (-4976.668) [-4965.709] (-4986.407) -- 0:29:37
158000 -- (-4989.720) [-4970.057] (-4970.520) (-4972.140) * [-4964.985] (-4987.769) (-4979.086) (-4990.530) -- 0:29:34
159000 -- (-4989.819) (-4986.501) (-4968.091) [-4964.209] * [-4968.946] (-4974.320) (-4983.232) (-4972.276) -- 0:29:31
160000 -- [-4978.163] (-4988.766) (-4981.184) (-4976.007) * (-4980.601) [-4966.466] (-4979.847) (-4995.359) -- 0:29:29
Average standard deviation of split frequencies: 0.021743
161000 -- (-4980.943) (-4974.047) [-4971.629] (-4968.312) * (-4984.301) (-4975.043) (-4978.870) [-4963.054] -- 0:29:26
162000 -- [-4970.563] (-4983.973) (-4977.316) (-4971.494) * (-5019.491) (-4983.995) [-4978.499] (-4986.301) -- 0:29:23
163000 -- (-4975.339) [-4976.054] (-4985.013) (-4995.587) * (-4986.428) [-4964.556] (-4977.794) (-4972.835) -- 0:29:21
164000 -- (-4987.775) (-5001.007) [-4980.666] (-4979.596) * (-4979.509) [-4962.245] (-4981.459) (-4985.653) -- 0:29:18
165000 -- (-4980.702) (-5002.580) [-4974.348] (-4986.940) * (-4977.350) (-4970.804) (-4980.307) [-4980.903] -- 0:29:21
Average standard deviation of split frequencies: 0.021124
166000 -- [-4969.943] (-4982.752) (-4985.986) (-4972.430) * [-4980.092] (-4972.065) (-4969.890) (-4974.825) -- 0:29:18
167000 -- [-4967.018] (-4971.843) (-4978.388) (-4986.965) * (-4998.455) (-4995.146) (-4993.686) [-4960.742] -- 0:29:15
168000 -- [-4976.774] (-4967.222) (-4969.048) (-4979.580) * (-4982.478) (-4976.118) [-4972.711] (-4969.405) -- 0:29:13
169000 -- (-4982.327) [-4972.944] (-4982.093) (-4981.247) * (-4985.019) (-4969.076) (-4985.473) [-4970.319] -- 0:29:10
170000 -- (-4984.569) (-4991.577) [-4980.563] (-4977.128) * (-4993.944) [-4965.213] (-4966.265) (-4979.583) -- 0:29:07
Average standard deviation of split frequencies: 0.019976
171000 -- (-4974.036) (-4991.651) [-4979.594] (-4961.540) * [-4981.129] (-4977.103) (-4969.380) (-4986.006) -- 0:29:05
172000 -- (-4973.423) (-4984.097) (-4974.894) [-4969.497] * (-4997.051) (-4973.787) (-4977.815) [-4976.988] -- 0:29:02
173000 -- (-4988.646) (-4985.593) (-4976.980) [-4970.201] * (-4974.279) [-4969.963] (-4979.326) (-4999.187) -- 0:29:04
174000 -- (-4985.052) [-4965.399] (-4980.442) (-4969.678) * [-4960.776] (-4980.236) (-4989.052) (-4968.799) -- 0:29:02
175000 -- (-4990.389) [-4967.340] (-4974.179) (-4991.936) * (-4983.855) (-4980.966) (-4982.430) [-4977.409] -- 0:28:59
Average standard deviation of split frequencies: 0.020417
176000 -- (-4991.935) (-4973.779) (-4986.980) [-4978.884] * (-4983.480) (-4984.140) [-4975.749] (-4983.823) -- 0:28:56
177000 -- (-4996.393) [-4975.140] (-4988.558) (-4980.023) * (-4974.648) (-4969.638) [-4966.973] (-4978.983) -- 0:28:54
178000 -- (-4991.003) (-4983.536) [-4970.975] (-4982.809) * (-4973.359) [-4973.085] (-4969.888) (-4981.191) -- 0:28:51
179000 -- (-4982.782) (-4986.623) [-4966.616] (-4979.196) * (-4980.348) [-4968.417] (-4976.388) (-4998.131) -- 0:28:49
180000 -- [-4965.284] (-4976.200) (-4962.341) (-4993.895) * (-4976.062) [-4986.185] (-4977.152) (-4980.771) -- 0:28:46
Average standard deviation of split frequencies: 0.019714
181000 -- (-4990.264) (-4980.800) [-4968.242] (-4984.966) * [-4975.235] (-4991.207) (-4976.570) (-4981.816) -- 0:28:43
182000 -- [-4974.826] (-5007.996) (-4966.766) (-5006.095) * (-4983.285) (-4987.779) (-4967.211) [-4971.164] -- 0:28:41
183000 -- (-4995.919) [-4982.861] (-4976.911) (-4987.768) * (-4989.989) (-4982.219) (-4965.262) [-4980.075] -- 0:28:38
184000 -- (-4985.820) (-4990.547) [-4968.065] (-4979.268) * (-4986.245) [-4976.662] (-4993.502) (-4984.376) -- 0:28:36
185000 -- (-4978.672) (-4975.490) [-4964.881] (-4986.723) * (-4977.850) (-4978.928) [-4960.803] (-4978.609) -- 0:28:38
Average standard deviation of split frequencies: 0.019665
186000 -- (-4968.346) (-4995.948) [-4961.215] (-4971.883) * [-4970.381] (-4973.055) (-4984.707) (-4981.790) -- 0:28:35
187000 -- (-4991.991) (-4987.435) (-4974.305) [-4978.975] * (-4980.067) (-4972.812) (-4971.917) [-4968.480] -- 0:28:32
188000 -- (-4989.771) (-4994.461) [-4977.119] (-4977.083) * (-4980.030) (-4984.987) (-4976.114) [-4985.440] -- 0:28:30
189000 -- [-4969.776] (-4988.262) (-4979.034) (-4974.255) * (-4989.692) (-4990.894) [-4971.691] (-4993.913) -- 0:28:27
190000 -- [-4980.037] (-4997.923) (-4992.774) (-4962.660) * (-4989.610) (-4986.631) [-4966.928] (-4995.213) -- 0:28:25
Average standard deviation of split frequencies: 0.018955
191000 -- (-5015.584) (-4973.958) (-4975.479) [-4961.492] * (-4962.682) [-4979.208] (-4988.548) (-4994.005) -- 0:28:22
192000 -- (-4986.581) (-4971.166) (-4984.556) [-4968.303] * [-4970.885] (-4980.512) (-4961.093) (-4981.615) -- 0:28:20
193000 -- (-4977.795) (-5002.472) (-4976.768) [-4977.685] * (-4973.648) (-4972.640) [-4970.620] (-4994.730) -- 0:28:17
194000 -- (-4974.513) (-4992.919) [-4969.975] (-4994.803) * (-4990.183) [-4972.937] (-4984.486) (-4989.367) -- 0:28:15
195000 -- [-4967.737] (-4978.937) (-4975.314) (-4975.150) * (-4958.809) (-4985.204) (-4986.673) [-4972.438] -- 0:28:16
Average standard deviation of split frequencies: 0.019981
196000 -- [-4977.156] (-4968.606) (-4996.217) (-4977.896) * (-4985.648) [-4964.615] (-4982.518) (-4996.206) -- 0:28:14
197000 -- (-4957.723) (-4975.221) (-4987.915) [-4964.983] * (-4981.239) (-4984.389) [-4980.001] (-4995.731) -- 0:28:11
198000 -- [-4981.573] (-4977.125) (-4977.339) (-4988.905) * (-4980.952) [-4986.813] (-4997.868) (-4984.600) -- 0:28:09
199000 -- (-4992.289) [-4964.975] (-5012.284) (-4965.840) * (-4973.430) [-4969.521] (-4990.404) (-4978.625) -- 0:28:06
200000 -- (-4990.554) (-4976.250) (-4992.352) [-4972.147] * (-4969.133) (-4974.984) [-4967.095] (-4985.706) -- 0:28:04
Average standard deviation of split frequencies: 0.019392
201000 -- (-4971.552) [-4965.833] (-4975.649) (-4979.682) * (-4964.039) (-5008.445) (-4979.140) [-4984.061] -- 0:28:01
202000 -- [-4963.621] (-5000.249) (-4998.779) (-4981.708) * [-4977.652] (-4988.860) (-4974.256) (-4989.294) -- 0:27:58
203000 -- (-4967.165) (-4989.992) [-4981.820] (-4969.606) * (-4975.865) (-4977.812) [-4979.082] (-4976.481) -- 0:27:56
204000 -- (-4975.352) [-4969.269] (-4988.904) (-4976.640) * (-4977.389) (-4968.718) (-4978.320) [-4968.344] -- 0:27:57
205000 -- (-4980.225) [-4970.945] (-4973.968) (-4981.337) * (-4980.747) [-4964.208] (-4991.491) (-4978.947) -- 0:27:55
Average standard deviation of split frequencies: 0.020811
206000 -- [-4978.222] (-4971.281) (-4984.439) (-4983.644) * (-4996.806) [-4986.244] (-5012.750) (-4980.323) -- 0:27:52
207000 -- [-4984.361] (-4987.974) (-4975.600) (-4994.694) * (-4996.568) (-4970.739) [-4965.128] (-4994.803) -- 0:27:50
208000 -- [-4967.254] (-4998.764) (-4975.275) (-4994.427) * (-4989.614) (-4979.234) (-4977.080) [-4976.526] -- 0:27:47
209000 -- [-4957.120] (-4977.640) (-4979.644) (-4989.743) * (-4993.571) (-4986.557) [-4974.555] (-4984.193) -- 0:27:45
210000 -- (-4991.018) (-4983.322) [-4963.480] (-4989.795) * (-4978.322) (-4985.640) (-4975.157) [-4969.909] -- 0:27:42
Average standard deviation of split frequencies: 0.022250
211000 -- (-4974.573) (-4981.648) (-4957.226) [-4974.912] * [-4974.174] (-4988.772) (-4979.815) (-4972.193) -- 0:27:40
212000 -- (-5005.047) (-4990.989) [-4992.013] (-4968.094) * (-4977.534) (-4982.225) (-4978.190) [-4985.054] -- 0:27:41
213000 -- (-4994.835) (-4970.462) [-4976.831] (-4978.572) * [-4971.865] (-4975.289) (-4961.227) (-4990.211) -- 0:27:38
214000 -- (-4974.145) [-4970.370] (-4969.418) (-4972.838) * (-4970.850) (-4978.526) [-4972.086] (-4991.933) -- 0:27:36
215000 -- (-4967.191) [-4964.532] (-4979.411) (-4983.513) * (-4975.550) [-4976.354] (-4972.692) (-4986.607) -- 0:27:33
Average standard deviation of split frequencies: 0.021248
216000 -- (-4973.958) [-4970.196] (-4992.028) (-4991.311) * (-4976.641) (-4991.328) (-4973.164) [-4978.724] -- 0:27:31
217000 -- (-4984.468) (-4973.615) (-4981.117) [-4968.181] * (-4986.060) (-4985.202) [-4964.401] (-4979.160) -- 0:27:28
218000 -- (-4979.580) (-4986.274) (-4980.747) [-4962.007] * (-4972.235) (-4999.893) [-4976.530] (-4988.882) -- 0:27:26
219000 -- [-4964.965] (-4982.333) (-4994.250) (-4983.934) * (-5001.630) (-4984.575) (-4978.057) [-4974.569] -- 0:27:24
220000 -- (-4979.086) [-4971.907] (-4981.703) (-4978.631) * [-4984.798] (-4979.783) (-4991.770) (-4990.777) -- 0:27:21
Average standard deviation of split frequencies: 0.021938
221000 -- (-4994.865) [-4968.466] (-4981.767) (-4973.460) * (-4968.656) [-4969.259] (-4984.898) (-4998.580) -- 0:27:22
222000 -- (-4987.047) (-4968.569) [-4988.517] (-4984.073) * (-4995.091) [-4966.439] (-4968.279) (-4975.826) -- 0:27:20
223000 -- [-4968.040] (-4978.386) (-4968.521) (-4982.513) * (-4982.416) (-4983.468) [-4985.087] (-4991.358) -- 0:27:17
224000 -- [-4971.550] (-4984.301) (-4991.207) (-4976.600) * (-4974.379) [-4980.391] (-4980.458) (-5002.397) -- 0:27:15
225000 -- [-4979.390] (-4971.066) (-4995.334) (-4991.243) * [-4971.196] (-4996.960) (-4975.317) (-4979.926) -- 0:27:12
Average standard deviation of split frequencies: 0.021646
226000 -- [-4994.110] (-4975.656) (-5000.628) (-4989.655) * (-4996.649) (-4985.526) [-4971.784] (-4975.204) -- 0:27:10
227000 -- (-4991.023) [-4979.427] (-4976.894) (-4984.327) * (-4984.056) (-4991.269) (-4980.304) [-4971.297] -- 0:27:07
228000 -- (-4986.238) (-4983.675) (-4997.005) [-4983.145] * (-4978.001) [-4982.643] (-4968.948) (-4974.722) -- 0:27:05
229000 -- (-4977.121) (-4991.348) (-5007.900) [-4976.448] * (-4998.061) (-4978.079) [-4978.624] (-4993.824) -- 0:27:02
230000 -- (-4989.239) (-4980.219) [-4978.427] (-4989.116) * [-4981.035] (-5013.237) (-4974.923) (-4973.529) -- 0:27:00
Average standard deviation of split frequencies: 0.021694
231000 -- (-4983.942) (-4972.437) (-4975.503) [-4976.123] * (-4994.357) (-4998.725) (-4980.156) [-4983.695] -- 0:27:01
232000 -- (-4986.811) (-4982.900) [-4967.479] (-4965.073) * (-4993.705) (-5003.541) (-4968.888) [-4982.540] -- 0:26:58
233000 -- (-4988.054) (-4968.876) (-4995.040) [-4966.932] * [-4976.335] (-4979.718) (-4967.265) (-4972.586) -- 0:26:56
234000 -- (-4987.236) (-4978.040) (-4971.528) [-4972.954] * (-4984.576) (-4972.768) [-4966.370] (-4967.189) -- 0:26:53
235000 -- (-4981.769) (-4979.729) (-4988.655) [-4966.930] * (-5009.270) (-4979.343) (-4984.396) [-4968.475] -- 0:26:51
Average standard deviation of split frequencies: 0.020163
236000 -- [-4972.040] (-4984.459) (-4987.756) (-4975.061) * (-4975.574) [-4983.070] (-4986.945) (-4965.202) -- 0:26:48
237000 -- [-4973.306] (-4986.679) (-4989.113) (-4977.047) * [-4969.991] (-4966.732) (-4988.168) (-4987.306) -- 0:26:46
238000 -- (-4977.102) (-4973.983) [-4989.486] (-4965.019) * (-4984.063) (-4983.751) [-4972.780] (-4986.864) -- 0:26:44
239000 -- [-4974.236] (-4985.290) (-4995.673) (-4966.371) * (-4984.009) [-4972.573] (-4971.151) (-4979.884) -- 0:26:41
240000 -- (-4989.745) (-4989.986) (-5003.252) [-4978.848] * (-4985.699) (-4987.598) (-4984.433) [-4968.392] -- 0:26:39
Average standard deviation of split frequencies: 0.020202
241000 -- [-4980.239] (-5005.870) (-4986.575) (-4990.524) * (-4992.337) (-4973.473) [-4972.985] (-5009.653) -- 0:26:36
242000 -- (-4996.036) (-4984.358) (-4979.043) [-4980.318] * (-4982.122) [-4975.113] (-4987.086) (-4980.069) -- 0:26:34
243000 -- (-4999.373) (-4990.744) (-4982.524) [-4974.333] * (-4989.995) (-4987.936) (-4989.671) [-4977.473] -- 0:26:31
244000 -- (-4987.026) (-5021.210) (-4977.582) [-4989.613] * (-4997.224) (-4977.874) [-4974.923] (-4983.787) -- 0:26:29
245000 -- (-5000.484) (-4977.900) [-4976.052] (-4995.384) * (-4983.891) [-4965.935] (-4989.407) (-4971.908) -- 0:26:27
Average standard deviation of split frequencies: 0.019310
246000 -- (-4989.734) [-4981.875] (-4972.001) (-4986.447) * (-4982.633) (-4964.935) (-4974.353) [-4973.659] -- 0:26:27
247000 -- (-4989.758) (-4975.501) [-4977.194] (-4972.320) * [-4972.026] (-4977.432) (-4969.465) (-4980.553) -- 0:26:25
248000 -- (-4974.337) [-4967.503] (-4993.854) (-4977.344) * [-4969.697] (-4979.531) (-4965.928) (-4967.718) -- 0:26:22
249000 -- (-4993.673) (-4990.540) (-4975.942) [-4970.743] * (-5003.028) (-4977.890) [-4973.757] (-4978.943) -- 0:26:20
250000 -- (-4979.725) (-4990.782) (-4975.484) [-4971.838] * (-4993.264) (-4980.099) [-4969.036] (-4974.680) -- 0:26:18
Average standard deviation of split frequencies: 0.018843
251000 -- [-4984.431] (-4975.818) (-4984.095) (-4982.745) * (-4994.132) (-4991.090) (-4982.109) [-4971.376] -- 0:26:15
252000 -- (-4980.720) (-4974.387) (-4968.945) [-4976.964] * (-4969.255) (-4995.942) (-4973.167) [-4983.147] -- 0:26:13
253000 -- (-4972.985) [-4969.993] (-4978.072) (-4971.378) * [-4975.925] (-4978.388) (-4968.819) (-4972.153) -- 0:26:13
254000 -- (-4984.713) (-4987.472) (-4984.300) [-4957.311] * (-4984.508) [-4970.997] (-4977.166) (-4984.293) -- 0:26:11
255000 -- (-4982.098) [-4969.750] (-4994.420) (-4994.618) * (-4987.299) (-4987.724) [-4973.638] (-4983.863) -- 0:26:08
Average standard deviation of split frequencies: 0.019136
256000 -- [-4969.366] (-4967.606) (-4993.397) (-5003.483) * (-4985.628) (-4964.503) [-4980.489] (-4984.722) -- 0:26:06
257000 -- [-4962.842] (-4968.679) (-4994.864) (-4982.322) * (-4997.538) [-4968.118] (-4983.916) (-4972.047) -- 0:26:04
258000 -- [-4973.848] (-4998.526) (-4980.165) (-4988.234) * (-4996.695) (-4975.788) (-4980.170) [-4972.413] -- 0:26:01
259000 -- (-4972.885) [-4978.718] (-4980.517) (-4977.495) * (-4985.274) [-4972.395] (-4983.027) (-4973.494) -- 0:25:59
260000 -- (-4968.045) (-4980.469) [-4976.272] (-4997.107) * [-4979.574] (-4978.431) (-4982.172) (-4989.833) -- 0:25:56
Average standard deviation of split frequencies: 0.019219
261000 -- [-4967.876] (-4973.529) (-4992.166) (-4972.888) * (-5009.428) [-4967.451] (-4979.619) (-4966.859) -- 0:25:54
262000 -- (-4980.619) (-4977.772) (-4974.189) [-4967.915] * (-4982.014) (-4982.941) (-4974.723) [-4964.269] -- 0:25:54
263000 -- (-4987.129) [-4964.638] (-5004.539) (-4976.879) * (-4988.197) (-4982.548) [-4969.714] (-4974.076) -- 0:25:52
264000 -- (-4976.781) (-4975.272) (-4977.516) [-4976.779] * [-4980.751] (-4978.366) (-4976.929) (-4982.371) -- 0:25:50
265000 -- (-4983.983) (-4983.701) [-4968.266] (-4978.208) * (-4997.357) [-4965.081] (-4974.095) (-4982.041) -- 0:25:47
Average standard deviation of split frequencies: 0.018764
266000 -- (-4979.550) [-4975.451] (-4974.537) (-4996.121) * (-4977.206) [-4967.336] (-4991.359) (-4975.128) -- 0:25:45
267000 -- (-4966.962) (-4984.072) [-4964.762] (-4987.755) * [-4969.344] (-4976.520) (-4970.067) (-4975.999) -- 0:25:42
268000 -- (-4977.609) [-4969.416] (-4990.023) (-4990.868) * (-4986.634) [-4959.834] (-4977.983) (-4976.592) -- 0:25:40
269000 -- (-4999.407) (-4988.520) (-4993.920) [-4975.538] * [-4986.767] (-4985.726) (-4979.096) (-4984.723) -- 0:25:38
270000 -- (-4977.982) [-4953.676] (-4980.974) (-4988.891) * (-4979.298) (-4976.003) (-4966.238) [-4970.720] -- 0:25:35
Average standard deviation of split frequencies: 0.017621
271000 -- (-4988.593) (-4959.262) [-4972.882] (-4989.810) * [-4978.088] (-4977.239) (-4984.257) (-4983.677) -- 0:25:33
272000 -- (-4992.009) [-4976.727] (-4984.484) (-4962.402) * (-4985.324) [-4973.150] (-5002.587) (-4983.557) -- 0:25:30
273000 -- (-4982.600) (-4998.715) (-4994.234) [-4966.670] * [-4976.827] (-4981.883) (-4999.189) (-4977.412) -- 0:25:28
274000 -- (-4983.502) (-4979.552) (-4997.491) [-4974.146] * (-4977.726) (-4994.467) (-4982.757) [-4970.808] -- 0:25:26
275000 -- [-4973.291] (-4965.259) (-4985.367) (-4998.612) * [-4975.350] (-4982.496) (-4976.659) (-4987.027) -- 0:25:26
Average standard deviation of split frequencies: 0.016738
276000 -- (-4973.681) [-4964.565] (-4969.248) (-5005.063) * (-4985.455) [-4974.148] (-4978.856) (-4988.219) -- 0:25:24
277000 -- (-4988.012) (-4984.149) [-4966.353] (-4983.851) * (-4980.034) [-4968.611] (-4970.257) (-4987.864) -- 0:25:21
278000 -- (-4986.087) (-4975.671) (-4977.178) [-4983.100] * (-4980.474) (-4991.279) (-4973.160) [-4968.322] -- 0:25:19
279000 -- [-4973.676] (-4973.480) (-4976.082) (-4981.210) * [-4971.714] (-4961.355) (-4995.561) (-4968.110) -- 0:25:16
280000 -- (-4987.852) (-4985.965) (-4978.072) [-4971.712] * [-4980.159] (-4973.872) (-5008.336) (-4985.997) -- 0:25:14
Average standard deviation of split frequencies: 0.015822
281000 -- (-4986.649) (-4968.791) [-4965.157] (-4991.857) * (-4984.185) (-4967.622) (-4988.990) [-4993.000] -- 0:25:12
282000 -- (-4977.609) (-4978.380) [-4971.771] (-4980.788) * [-4990.313] (-4983.432) (-4991.337) (-4974.164) -- 0:25:09
283000 -- (-4983.205) (-4984.329) [-4967.421] (-4989.493) * (-4988.115) (-4971.195) (-4980.779) [-4960.204] -- 0:25:07
284000 -- (-4986.031) [-4982.019] (-4970.254) (-4976.362) * (-4989.779) [-4985.783] (-4986.401) (-4969.641) -- 0:25:07
285000 -- [-4976.633] (-5005.397) (-4974.347) (-4972.010) * [-4969.034] (-4983.552) (-4979.584) (-4974.372) -- 0:25:05
Average standard deviation of split frequencies: 0.015757
286000 -- (-4974.014) (-4977.195) [-4967.408] (-4968.734) * (-4966.100) (-5000.347) (-4985.317) [-4979.177] -- 0:25:02
287000 -- (-4973.378) (-4980.421) (-4988.301) [-4973.129] * (-4975.436) (-4979.428) [-4974.131] (-4969.266) -- 0:25:00
288000 -- (-4979.530) (-4978.140) (-4978.865) [-4963.857] * (-4970.787) (-5011.930) (-4980.363) [-4970.739] -- 0:24:58
289000 -- (-4974.950) (-4990.218) (-4975.576) [-4978.151] * [-4971.125] (-4998.736) (-4986.723) (-4981.874) -- 0:24:55
290000 -- (-4972.788) (-4975.469) (-4971.611) [-4955.233] * (-4993.468) (-4990.533) [-4989.582] (-4979.345) -- 0:24:53
Average standard deviation of split frequencies: 0.016218
291000 -- (-4977.369) [-4981.453] (-4987.047) (-4965.546) * (-4969.846) [-4968.874] (-4986.767) (-4986.476) -- 0:24:51
292000 -- [-4971.509] (-4989.554) (-4980.536) (-4969.977) * [-4968.795] (-4980.573) (-4984.816) (-4985.673) -- 0:24:48
293000 -- (-4967.506) (-4997.444) (-4976.017) [-4971.051] * (-4969.592) [-4978.271] (-4982.070) (-4986.564) -- 0:24:46
294000 -- (-4969.044) (-4978.812) [-4986.146] (-4973.983) * [-4972.204] (-4981.713) (-4986.955) (-4979.687) -- 0:24:44
295000 -- (-4967.828) [-4962.141] (-4970.044) (-4990.148) * [-4978.509] (-4973.441) (-4984.912) (-4978.002) -- 0:24:41
Average standard deviation of split frequencies: 0.016394
296000 -- (-4974.680) (-4994.410) (-4973.202) [-4983.212] * (-4984.053) (-4966.756) (-5016.034) [-4964.992] -- 0:24:39
297000 -- (-4972.807) [-4971.805] (-4986.065) (-4984.176) * (-4984.235) [-4977.666] (-5000.252) (-4977.189) -- 0:24:37
298000 -- (-4974.592) (-4997.038) (-4971.517) [-4977.403] * [-4968.197] (-4997.947) (-4973.081) (-4988.001) -- 0:24:34
299000 -- (-4990.593) (-4997.176) (-4970.949) [-4956.669] * [-4965.963] (-4990.938) (-4964.079) (-4994.980) -- 0:24:32
300000 -- (-4993.923) (-4974.827) (-4982.466) [-4976.585] * [-4965.168] (-4979.221) (-4981.318) (-4992.628) -- 0:24:32
Average standard deviation of split frequencies: 0.015894
301000 -- (-4976.676) (-4971.448) (-4987.330) [-4972.034] * (-4985.744) (-4974.754) [-4976.043] (-4994.241) -- 0:24:29
302000 -- (-4974.836) [-4967.732] (-4983.776) (-4992.268) * (-4966.525) [-4975.292] (-4975.612) (-5014.895) -- 0:24:25
303000 -- (-4974.849) [-4972.476] (-4962.165) (-4980.137) * (-4989.956) [-4975.795] (-4985.371) (-4992.408) -- 0:24:23
304000 -- (-4970.128) (-4984.833) (-4990.350) [-4970.573] * (-4985.866) [-4969.014] (-4982.652) (-4989.426) -- 0:24:20
305000 -- (-4977.726) (-4997.851) [-4972.058] (-4986.867) * (-4974.208) (-4985.330) (-4989.421) [-4969.919] -- 0:24:18
Average standard deviation of split frequencies: 0.015436
306000 -- (-4974.732) (-4992.239) (-4983.458) [-4965.293] * (-4970.913) (-4974.270) (-4991.348) [-4972.210] -- 0:24:18
307000 -- [-4974.191] (-4979.715) (-5009.390) (-4972.296) * [-4979.156] (-4979.314) (-4983.130) (-4991.130) -- 0:24:13
308000 -- [-4981.627] (-4960.965) (-4975.614) (-4979.227) * (-4972.562) [-4969.600] (-4995.784) (-5002.258) -- 0:24:13
309000 -- (-4988.468) [-4973.419] (-4980.862) (-4975.265) * [-4983.775] (-4961.583) (-4991.512) (-4998.449) -- 0:24:11
310000 -- (-4991.954) [-4973.942] (-4975.297) (-4979.946) * (-4987.670) (-4974.563) [-4975.672] (-4987.753) -- 0:24:09
Average standard deviation of split frequencies: 0.014430
311000 -- (-4999.064) (-4969.300) [-4974.664] (-4980.964) * (-5003.046) [-4967.522] (-4976.002) (-4966.427) -- 0:24:06
312000 -- [-4972.526] (-4970.713) (-4980.737) (-4979.330) * (-4986.551) (-4980.908) [-4972.064] (-4996.319) -- 0:24:04
313000 -- (-4979.895) (-4965.050) [-4971.349] (-4976.356) * (-4974.262) [-4985.303] (-4991.285) (-4995.424) -- 0:24:02
314000 -- (-4970.347) (-4970.249) [-4967.246] (-4956.546) * (-4982.348) (-4968.683) (-4975.455) [-4978.856] -- 0:23:59
315000 -- (-4976.121) (-4979.193) (-4998.783) [-4968.595] * (-4995.238) [-4975.176] (-4981.331) (-4994.791) -- 0:23:57
Average standard deviation of split frequencies: 0.015444
316000 -- (-4971.265) (-4973.808) (-4988.074) [-4979.271] * (-4993.826) (-4983.588) (-4992.459) [-4973.560] -- 0:23:55
317000 -- (-4991.005) (-4981.143) [-4980.811] (-4977.856) * (-4983.892) [-4973.357] (-4981.423) (-4973.984) -- 0:23:52
318000 -- (-4969.153) (-4979.783) [-4977.118] (-4978.490) * (-4986.994) (-4974.765) (-4974.649) [-4975.539] -- 0:23:50
319000 -- (-4968.874) (-4990.019) (-4979.044) [-4976.356] * (-5001.069) (-4980.493) (-4969.972) [-4977.239] -- 0:23:48
320000 -- [-4962.125] (-4972.836) (-4974.912) (-4973.757) * (-4990.448) (-4983.087) (-4966.864) [-4976.131] -- 0:23:45
Average standard deviation of split frequencies: 0.015796
321000 -- [-4961.069] (-4975.156) (-4969.740) (-4983.694) * [-4974.256] (-4990.907) (-4978.085) (-4986.258) -- 0:23:45
322000 -- (-4985.531) [-4971.276] (-4969.973) (-4986.063) * (-4975.530) (-4999.959) (-4987.887) [-4972.813] -- 0:23:43
323000 -- [-4978.725] (-4961.777) (-4966.618) (-4995.340) * (-4981.893) (-4973.976) (-4990.119) [-4976.328] -- 0:23:41
324000 -- [-4964.962] (-5001.874) (-4979.421) (-5006.584) * (-4983.679) [-4971.362] (-5013.196) (-4990.693) -- 0:23:38
325000 -- (-4975.180) (-4975.521) [-4962.715] (-4994.784) * (-4993.610) [-4961.407] (-4977.650) (-4979.900) -- 0:23:36
Average standard deviation of split frequencies: 0.015793
326000 -- (-4983.110) (-4986.021) (-4980.111) [-4968.137] * (-4998.444) (-4978.814) [-4966.931] (-4977.436) -- 0:23:34
327000 -- (-4983.858) (-4992.877) (-4985.873) [-4965.969] * (-4976.023) [-4979.352] (-4974.321) (-4987.792) -- 0:23:31
328000 -- (-4980.073) (-4993.923) [-4984.465] (-4974.875) * (-4975.171) [-4985.205] (-4988.964) (-4984.229) -- 0:23:29
329000 -- [-4970.673] (-4980.035) (-4983.642) (-4969.723) * (-4970.068) (-4985.569) (-5000.989) [-4972.330] -- 0:23:29
330000 -- (-4978.704) (-4981.884) [-4964.809] (-4970.477) * [-4958.083] (-4976.224) (-4978.345) (-4993.841) -- 0:23:27
Average standard deviation of split frequencies: 0.016409
331000 -- [-4960.356] (-4969.042) (-4963.974) (-4985.039) * (-4979.166) (-4969.060) [-4988.526] (-4992.316) -- 0:23:24
332000 -- (-4972.743) (-4994.358) (-4961.085) [-4978.783] * (-5003.374) [-4976.744] (-4967.982) (-4972.034) -- 0:23:22
333000 -- [-4977.898] (-4997.657) (-4970.992) (-4968.702) * (-5000.680) (-4974.528) (-4985.234) [-4975.191] -- 0:23:20
334000 -- (-4975.131) (-4973.779) [-4964.141] (-4977.930) * (-4977.002) [-4961.562] (-4990.883) (-4973.579) -- 0:23:17
335000 -- (-4980.281) (-4991.141) (-4981.601) [-4979.554] * (-4987.324) (-4984.350) (-4990.981) [-4978.787] -- 0:23:17
Average standard deviation of split frequencies: 0.016026
336000 -- [-4968.390] (-4994.793) (-4972.731) (-4989.586) * [-4983.881] (-4978.548) (-4989.654) (-4974.028) -- 0:23:15
337000 -- (-4981.347) (-4987.822) [-4964.898] (-4970.130) * (-4988.431) (-4983.654) (-4986.111) [-4974.437] -- 0:23:12
338000 -- [-4971.953] (-4987.071) (-4979.075) (-4978.344) * (-4979.320) (-4978.991) [-4975.792] (-4993.022) -- 0:23:10
339000 -- [-4964.724] (-4976.724) (-4977.445) (-4975.259) * [-4972.349] (-4988.774) (-4976.491) (-5008.510) -- 0:23:08
340000 -- (-4982.732) [-4965.287] (-4986.057) (-4986.264) * (-4984.625) [-4973.017] (-4979.653) (-4996.418) -- 0:23:06
Average standard deviation of split frequencies: 0.016171
341000 -- (-4985.714) [-4969.184] (-4982.392) (-4970.390) * [-4968.188] (-4981.776) (-4982.195) (-4979.075) -- 0:23:03
342000 -- (-4986.841) (-4959.228) (-4971.842) [-4977.155] * (-4985.788) (-4966.861) [-4982.083] (-4972.765) -- 0:23:01
343000 -- (-4983.204) (-4973.364) [-4977.755] (-5005.444) * (-4972.003) [-4970.949] (-4981.393) (-4975.322) -- 0:23:01
344000 -- (-4992.032) [-4982.573] (-4989.093) (-4982.722) * [-4992.796] (-4979.650) (-4982.937) (-4974.057) -- 0:22:58
345000 -- [-4964.954] (-4974.036) (-4983.208) (-4979.823) * [-4969.889] (-4982.547) (-4980.122) (-4996.845) -- 0:22:56
Average standard deviation of split frequencies: 0.016429
346000 -- (-4991.661) (-4978.718) [-4970.585] (-4975.354) * [-4970.962] (-4979.084) (-5011.250) (-4986.722) -- 0:22:54
347000 -- (-4972.637) (-4974.014) [-4975.674] (-4981.260) * (-4985.212) [-4960.247] (-5005.597) (-4970.660) -- 0:22:51
348000 -- (-4992.004) [-4965.418] (-4977.646) (-4990.800) * (-4973.788) [-4967.641] (-5000.277) (-5005.280) -- 0:22:49
349000 -- (-4977.841) [-4983.611] (-4974.287) (-4963.757) * [-4964.031] (-4969.515) (-4976.411) (-5008.915) -- 0:22:47
350000 -- (-4977.185) (-4983.181) (-4978.564) [-4969.561] * (-4985.585) [-4979.299] (-4974.401) (-4987.469) -- 0:22:45
Average standard deviation of split frequencies: 0.016856
351000 -- [-4984.210] (-4969.897) (-4982.622) (-4979.135) * (-4983.054) (-4984.871) (-4982.089) [-4978.507] -- 0:22:42
352000 -- (-4971.473) [-4965.868] (-4970.693) (-4990.350) * [-4971.874] (-4969.324) (-4980.314) (-4976.365) -- 0:22:42
353000 -- [-4972.417] (-4987.111) (-4987.406) (-4981.547) * (-4988.139) [-4971.822] (-4989.609) (-4969.077) -- 0:22:39
354000 -- (-4984.775) (-4970.013) (-4978.230) [-4981.902] * (-4971.514) (-4966.936) (-4982.275) [-4975.852] -- 0:22:37
355000 -- [-4968.752] (-4977.061) (-4971.961) (-4990.344) * (-4983.628) [-4977.916] (-4972.652) (-4987.929) -- 0:22:35
Average standard deviation of split frequencies: 0.017136
356000 -- (-4989.231) (-4985.868) (-4975.879) [-4965.253] * (-4980.994) (-4972.094) (-4985.780) [-4973.127] -- 0:22:33
357000 -- (-4972.959) (-4973.350) (-4972.380) [-4983.674] * [-4970.727] (-4991.996) (-4987.538) (-4980.222) -- 0:22:30
358000 -- [-4975.468] (-4971.544) (-4966.948) (-4983.090) * (-4991.533) (-4974.453) [-4971.582] (-4969.503) -- 0:22:28
359000 -- (-4987.383) (-4965.942) [-4957.016] (-4980.555) * (-4975.049) (-4992.463) (-4981.972) [-4964.882] -- 0:22:26
360000 -- [-4970.581] (-4965.726) (-4981.224) (-4966.205) * (-4984.214) (-4985.845) (-4995.475) [-4970.079] -- 0:22:24
Average standard deviation of split frequencies: 0.017171
361000 -- (-4988.632) [-4972.955] (-4970.235) (-4967.086) * (-4980.092) (-4973.945) (-4980.891) [-4966.648] -- 0:22:21
362000 -- [-4976.485] (-4982.436) (-4982.669) (-4972.228) * (-4994.893) [-4970.961] (-4987.166) (-4979.072) -- 0:22:19
363000 -- (-4991.033) (-4987.482) [-4977.292] (-4983.738) * [-4990.554] (-4974.439) (-4977.815) (-4968.487) -- 0:22:18
364000 -- (-4981.776) (-4984.934) [-4963.882] (-4978.879) * (-4986.063) (-4973.282) [-4967.454] (-4982.070) -- 0:22:16
365000 -- (-4976.299) (-4975.945) [-4979.446] (-4984.013) * (-4993.343) (-4981.604) [-4974.550] (-4982.881) -- 0:22:14
Average standard deviation of split frequencies: 0.016917
366000 -- (-5004.877) (-4990.902) (-4967.797) [-4970.296] * (-4993.458) (-4976.822) (-4989.533) [-4970.022] -- 0:22:12
367000 -- (-5005.630) (-4982.988) (-4976.416) [-4972.311] * (-4976.336) (-4979.773) [-4971.081] (-4971.657) -- 0:22:09
368000 -- (-4974.055) (-5000.818) [-4968.879] (-4971.887) * (-4976.734) (-4986.744) (-4984.434) [-4981.087] -- 0:22:07
369000 -- [-4969.040] (-4986.774) (-4988.000) (-4972.887) * (-4981.702) (-4987.940) (-4972.050) [-4961.789] -- 0:22:05
370000 -- (-4977.088) (-4979.308) [-4980.160] (-4987.118) * (-4981.465) (-4980.306) (-4982.098) [-4962.227] -- 0:22:04
Average standard deviation of split frequencies: 0.016269
371000 -- (-4970.988) (-4977.045) (-4982.041) [-4975.388] * (-4975.844) (-4993.342) (-4984.000) [-4979.183] -- 0:22:02
372000 -- (-4984.663) (-4968.717) [-4990.274] (-4995.992) * (-4978.069) (-4975.080) [-4972.259] (-4987.026) -- 0:22:00
373000 -- (-4981.272) [-4965.884] (-4994.770) (-4994.576) * [-4971.210] (-4982.962) (-4983.300) (-4986.412) -- 0:21:57
374000 -- (-5008.618) [-4966.600] (-4986.174) (-4972.806) * (-4986.014) (-4994.843) (-4985.089) [-4975.374] -- 0:21:55
375000 -- (-4998.395) (-4987.417) [-4978.526] (-4980.792) * (-5001.606) (-4978.296) (-4969.113) [-4974.313] -- 0:21:53
Average standard deviation of split frequencies: 0.016371
376000 -- (-4983.731) [-4959.663] (-4984.075) (-4967.354) * (-4975.613) (-4982.670) (-4972.712) [-4965.382] -- 0:21:51
377000 -- (-4982.526) (-4987.761) [-4972.273] (-4976.737) * [-4972.642] (-4979.667) (-4985.126) (-4965.393) -- 0:21:48
378000 -- [-4982.017] (-4976.788) (-4977.339) (-4985.515) * (-4966.603) (-4990.557) (-4973.099) [-4973.429] -- 0:21:46
379000 -- (-4984.386) [-4974.426] (-4970.848) (-4980.136) * (-4981.207) (-4967.821) (-4982.819) [-4976.950] -- 0:21:44
380000 -- (-4974.150) [-4977.940] (-4981.547) (-4984.309) * [-4973.746] (-4971.724) (-4984.174) (-4981.918) -- 0:21:42
Average standard deviation of split frequencies: 0.016646
381000 -- (-4978.766) [-4984.275] (-4976.305) (-4988.777) * (-4992.102) (-4979.923) (-4975.844) [-4974.059] -- 0:21:41
382000 -- (-4981.945) (-4988.896) [-4963.682] (-4994.061) * (-4991.941) (-4981.216) (-4986.965) [-4981.983] -- 0:21:39
383000 -- (-4978.347) (-5000.120) [-4958.510] (-4980.275) * (-4985.362) [-4969.681] (-4986.134) (-4971.673) -- 0:21:36
384000 -- (-4976.763) (-4965.179) (-4964.668) [-4967.780] * (-4978.103) (-4972.614) [-4976.592] (-4985.479) -- 0:21:34
385000 -- (-4968.817) [-4986.069] (-4964.372) (-4969.878) * [-4980.879] (-4964.811) (-4984.186) (-4979.815) -- 0:21:32
Average standard deviation of split frequencies: 0.016816
386000 -- (-4985.059) (-4992.548) (-4990.400) [-4977.259] * (-4984.958) (-4980.014) (-4982.626) [-4979.045] -- 0:21:30
387000 -- (-4979.617) [-4974.510] (-4967.460) (-4987.473) * [-4966.530] (-4975.437) (-4995.765) (-4984.088) -- 0:21:27
388000 -- (-4974.160) (-4993.772) [-4975.692] (-4980.034) * [-4976.931] (-4976.533) (-4987.446) (-4995.264) -- 0:21:25
389000 -- [-4964.941] (-4976.491) (-4987.963) (-4979.807) * (-4999.869) (-4974.594) [-4963.627] (-4982.809) -- 0:21:23
390000 -- [-4982.981] (-4983.237) (-4990.208) (-4986.471) * (-4999.127) (-4985.995) (-4977.548) [-4984.608] -- 0:21:21
Average standard deviation of split frequencies: 0.015459
391000 -- (-4974.680) (-4968.865) (-4985.574) [-4982.179] * (-4981.456) (-4986.837) (-4986.982) [-4965.811] -- 0:21:18
392000 -- (-4994.180) [-4974.067] (-4975.752) (-4988.679) * (-4994.854) (-4987.866) (-4976.393) [-4968.137] -- 0:21:16
393000 -- (-4975.473) [-4969.247] (-4981.301) (-4974.244) * (-4979.446) (-4985.429) [-4966.439] (-4975.091) -- 0:21:14
394000 -- [-4974.957] (-4988.249) (-4977.029) (-4970.452) * (-4975.962) (-4998.349) [-4978.529] (-4972.583) -- 0:21:11
395000 -- (-4986.017) (-4975.213) [-4978.302] (-4963.086) * (-4984.103) (-4988.907) [-4970.313] (-4970.219) -- 0:21:11
Average standard deviation of split frequencies: 0.015155
396000 -- (-4972.055) [-4972.970] (-4988.514) (-4963.219) * (-4968.281) (-4972.978) (-4993.004) [-4965.594] -- 0:21:09
397000 -- (-4973.876) [-4966.899] (-5004.306) (-4990.468) * [-4965.187] (-4981.911) (-4976.853) (-4968.082) -- 0:21:06
398000 -- (-4989.834) [-4970.934] (-5004.150) (-4970.719) * (-4981.859) (-4978.494) (-4989.095) [-4966.363] -- 0:21:04
399000 -- (-4969.050) (-4982.444) [-4977.417] (-4994.592) * (-4984.267) (-4977.771) (-4994.264) [-4964.593] -- 0:21:02
400000 -- [-4978.720] (-4996.999) (-4971.408) (-4982.199) * (-4971.818) [-4973.399] (-4987.693) (-4976.696) -- 0:21:00
Average standard deviation of split frequencies: 0.015073
401000 -- [-4981.341] (-4991.854) (-4972.728) (-4983.349) * [-4967.093] (-4978.230) (-4968.656) (-4984.501) -- 0:20:57
402000 -- (-4975.315) (-4984.758) [-4968.805] (-4996.948) * (-4986.722) (-4976.412) [-4963.771] (-4986.198) -- 0:20:55
403000 -- (-4964.182) (-4983.803) [-4984.545] (-4988.396) * (-4963.168) (-4995.667) [-4966.340] (-4971.259) -- 0:20:54
404000 -- [-4969.228] (-4971.246) (-5000.500) (-5009.405) * (-4972.062) (-4985.633) [-4965.693] (-4983.826) -- 0:20:52
405000 -- [-4964.164] (-4980.498) (-4992.248) (-4979.410) * (-4978.443) [-4964.114] (-4970.901) (-4973.116) -- 0:20:50
Average standard deviation of split frequencies: 0.015248
406000 -- [-4971.506] (-4965.716) (-4998.015) (-4987.711) * [-4956.528] (-4976.931) (-4983.054) (-4989.561) -- 0:20:47
407000 -- (-4976.098) (-4964.407) (-4988.997) [-4986.648] * (-4970.139) [-4971.327] (-4976.101) (-5002.325) -- 0:20:45
408000 -- [-4992.064] (-4980.267) (-4984.695) (-4979.082) * [-4970.401] (-4974.241) (-4971.860) (-4990.094) -- 0:20:43
409000 -- [-4972.280] (-4984.747) (-4970.519) (-4980.381) * (-4988.350) (-5010.257) (-4967.190) [-4958.870] -- 0:20:41
410000 -- (-4976.250) (-4974.597) (-4979.897) [-4975.045] * (-4979.423) (-4989.569) [-4969.570] (-4971.116) -- 0:20:40
Average standard deviation of split frequencies: 0.015074
411000 -- (-4998.400) (-4976.934) [-4967.668] (-4975.829) * [-4968.759] (-4988.007) (-4995.617) (-4994.021) -- 0:20:38
412000 -- [-4973.445] (-4982.112) (-4990.472) (-4979.062) * (-4977.273) (-4980.498) [-4963.414] (-4980.498) -- 0:20:35
413000 -- [-4972.874] (-4986.078) (-4972.214) (-4975.521) * (-4988.071) (-4966.942) (-4963.359) [-4971.115] -- 0:20:33
414000 -- [-4965.181] (-4987.584) (-4988.355) (-4992.985) * (-4979.700) (-4985.199) [-4964.266] (-4991.090) -- 0:20:31
415000 -- [-4956.266] (-4978.391) (-4968.202) (-4997.242) * (-5009.156) [-4985.170] (-4973.355) (-4991.752) -- 0:20:29
Average standard deviation of split frequencies: 0.015544
416000 -- [-4953.452] (-4970.460) (-4976.051) (-4993.110) * (-4993.569) (-4997.741) (-4972.132) [-4970.735] -- 0:20:26
417000 -- (-4979.759) (-4980.255) [-4969.869] (-4979.995) * (-4980.460) [-4981.657] (-4977.066) (-4975.768) -- 0:20:24
418000 -- [-4975.227] (-4977.410) (-4971.023) (-4990.442) * (-4980.213) (-4969.706) (-4982.920) [-4980.011] -- 0:20:22
419000 -- (-4975.339) (-4987.953) [-4967.720] (-4972.946) * [-4974.659] (-4983.306) (-4974.591) (-4997.987) -- 0:20:20
420000 -- (-4970.673) (-5001.787) [-4983.466] (-4988.827) * [-4971.137] (-4993.420) (-4967.417) (-4983.659) -- 0:20:19
Average standard deviation of split frequencies: 0.015581
421000 -- [-4966.258] (-4988.083) (-4973.116) (-4981.047) * [-4967.522] (-4978.516) (-4977.052) (-4980.969) -- 0:20:17
422000 -- [-4968.000] (-4980.008) (-4984.588) (-4975.761) * (-4965.472) [-4978.366] (-4973.735) (-4977.212) -- 0:20:14
423000 -- (-4988.966) (-4971.212) [-4968.512] (-4991.201) * (-4968.466) (-4980.474) [-4959.354] (-4993.765) -- 0:20:12
424000 -- (-4983.517) (-4989.557) [-4964.506] (-4980.214) * [-4971.330] (-4997.664) (-4980.397) (-4994.007) -- 0:20:10
425000 -- (-4988.734) [-4983.348] (-4974.012) (-4987.029) * (-4984.225) [-4980.811] (-4991.418) (-4979.780) -- 0:20:08
Average standard deviation of split frequencies: 0.015910
426000 -- (-4977.431) [-4989.652] (-4972.199) (-4989.404) * (-4994.115) (-4978.106) (-4980.980) [-4974.476] -- 0:20:05
427000 -- (-4971.974) (-4975.844) [-4974.481] (-4979.032) * (-4993.257) (-4977.138) (-4990.022) [-4969.813] -- 0:20:03
428000 -- (-4978.889) (-4975.669) [-4975.341] (-4991.460) * (-4985.230) (-4969.404) (-4975.367) [-4974.989] -- 0:20:01
429000 -- (-4974.318) (-4988.881) (-4970.109) [-4970.765] * (-4991.775) (-4994.165) [-4967.107] (-4977.626) -- 0:20:00
430000 -- [-4975.824] (-4992.018) (-4980.827) (-4971.174) * (-4979.141) (-4978.781) (-4967.067) [-4966.154] -- 0:19:58
Average standard deviation of split frequencies: 0.016061
431000 -- (-4974.609) (-5000.424) [-4962.212] (-4981.479) * (-4974.053) (-4996.371) (-4974.448) [-4967.179] -- 0:19:56
432000 -- (-4978.248) (-4991.392) (-4965.172) [-4969.759] * (-4967.196) (-4984.861) [-4973.537] (-4975.517) -- 0:19:53
433000 -- (-4968.596) (-5010.157) [-4974.384] (-4981.122) * (-4989.133) (-4978.627) [-4978.301] (-4993.756) -- 0:19:51
434000 -- (-4969.714) (-4994.324) (-4968.216) [-4968.860] * [-4966.476] (-4970.514) (-4964.596) (-4987.483) -- 0:19:49
435000 -- (-4999.428) (-4983.662) (-4974.994) [-4968.734] * [-4982.066] (-4980.272) (-4968.412) (-4976.086) -- 0:19:47
Average standard deviation of split frequencies: 0.015740
436000 -- (-4983.268) (-4987.658) [-4970.585] (-4967.553) * (-4978.811) [-4972.520] (-4966.421) (-4989.898) -- 0:19:44
437000 -- (-4975.656) [-4978.853] (-4963.117) (-4967.489) * (-4973.624) [-4968.510] (-4988.577) (-4977.478) -- 0:19:43
438000 -- [-4981.293] (-4986.126) (-4987.067) (-4970.256) * (-4979.435) (-4981.246) (-4973.910) [-4971.926] -- 0:19:41
439000 -- (-4972.794) [-4973.642] (-4982.621) (-4985.324) * [-4980.971] (-4992.629) (-4976.782) (-4978.139) -- 0:19:39
440000 -- (-4993.719) (-4989.887) [-4978.249] (-4978.504) * (-4978.081) [-4963.379] (-4986.045) (-4980.456) -- 0:19:37
Average standard deviation of split frequencies: 0.016602
441000 -- (-4987.421) (-4979.586) [-4965.950] (-4988.236) * (-4970.082) (-4969.724) [-4980.770] (-4992.176) -- 0:19:35
442000 -- (-4988.224) (-4992.955) [-4964.919] (-4978.918) * (-4981.232) (-4979.269) (-4979.132) [-4976.891] -- 0:19:32
443000 -- (-4972.434) (-4976.189) [-4973.087] (-4985.891) * (-4962.501) (-4973.439) [-4971.399] (-4998.897) -- 0:19:30
444000 -- (-4993.205) [-4978.809] (-4981.464) (-4975.623) * [-4974.416] (-4974.146) (-4982.553) (-4969.841) -- 0:19:28
445000 -- (-4980.242) [-4968.027] (-4992.989) (-4978.530) * (-4977.146) (-4975.942) (-4984.389) [-4975.005] -- 0:19:26
Average standard deviation of split frequencies: 0.015972
446000 -- (-4989.593) (-4969.438) (-4987.884) [-4973.321] * (-4979.587) [-4976.919] (-4974.414) (-4978.193) -- 0:19:25
447000 -- (-4994.885) (-4989.122) [-4977.906] (-4970.379) * (-4980.674) (-4993.989) [-4973.226] (-4969.041) -- 0:19:22
448000 -- (-4982.476) (-4990.173) [-4970.196] (-4981.848) * (-4985.835) [-4964.084] (-4971.562) (-4971.147) -- 0:19:20
449000 -- (-4984.440) (-4967.736) (-4980.170) [-4972.198] * (-4977.209) [-4965.340] (-4976.772) (-4990.877) -- 0:19:18
450000 -- [-4975.481] (-4984.876) (-4986.474) (-4970.118) * (-4983.454) (-4997.435) [-4965.418] (-4984.960) -- 0:19:16
Average standard deviation of split frequencies: 0.015458
451000 -- (-4997.742) (-4981.683) [-4980.019] (-4997.293) * (-4998.096) (-4983.844) (-4982.219) [-4966.868] -- 0:19:13
452000 -- [-4985.546] (-4989.591) (-4989.785) (-4984.142) * (-4969.529) (-4982.906) (-4989.707) [-4955.357] -- 0:19:11
453000 -- [-4979.016] (-4987.082) (-4971.278) (-4996.054) * [-4964.480] (-4997.283) (-4980.499) (-4975.141) -- 0:19:09
454000 -- (-4982.046) (-4973.379) (-4981.788) [-4978.262] * [-4965.596] (-4991.108) (-4986.760) (-4987.570) -- 0:19:08
455000 -- (-4980.502) [-4976.389] (-4965.163) (-4989.626) * (-4972.841) (-4989.124) (-4994.048) [-4970.120] -- 0:19:06
Average standard deviation of split frequencies: 0.014779
456000 -- (-4984.328) (-4965.394) [-4977.394] (-4979.552) * (-4988.294) (-4986.008) (-4985.941) [-4977.632] -- 0:19:04
457000 -- (-4985.565) (-4969.662) (-4977.100) [-4975.788] * (-4997.300) (-4970.949) [-4969.773] (-4971.437) -- 0:19:01
458000 -- (-4971.690) (-4981.007) (-4986.758) [-4971.799] * (-4987.381) (-4977.197) (-4978.523) [-4976.040] -- 0:18:59
459000 -- (-4985.094) (-4978.900) (-4978.003) [-4966.389] * (-4985.188) [-4964.155] (-4972.429) (-4974.730) -- 0:18:57
460000 -- [-4982.960] (-4978.938) (-4969.296) (-4989.025) * (-4977.618) [-4964.177] (-4988.718) (-4978.970) -- 0:18:55
Average standard deviation of split frequencies: 0.014983
461000 -- (-5000.515) [-4968.033] (-4976.698) (-4991.973) * [-4980.845] (-4978.540) (-4979.672) (-4976.163) -- 0:18:54
462000 -- (-4986.762) [-4970.788] (-4979.408) (-4993.009) * (-4965.234) (-4967.943) (-4991.981) [-4973.000] -- 0:18:51
463000 -- (-4979.658) [-4968.255] (-4995.871) (-4977.312) * (-4965.737) [-4977.714] (-4990.118) (-4984.634) -- 0:18:49
464000 -- (-4990.225) [-4969.350] (-4977.057) (-4983.919) * (-4984.956) (-4971.030) [-4974.859] (-4986.512) -- 0:18:47
465000 -- (-4975.035) [-4973.686] (-4984.354) (-4996.102) * [-4970.443] (-4966.337) (-4980.549) (-5000.052) -- 0:18:45
Average standard deviation of split frequencies: 0.014818
466000 -- (-4965.077) (-4976.619) (-4974.712) [-4962.213] * (-4965.063) [-4971.258] (-4991.390) (-4985.770) -- 0:18:43
467000 -- (-4967.315) (-4992.036) (-5003.593) [-4979.857] * (-4978.187) (-4981.506) [-4970.008] (-4988.997) -- 0:18:40
468000 -- (-4991.710) [-4977.556] (-4973.335) (-4978.303) * (-4985.473) (-4972.471) (-4991.339) [-4978.128] -- 0:18:39
469000 -- (-4992.202) (-4972.305) (-4988.896) [-4971.046] * (-4975.310) (-4989.277) [-4967.819] (-4988.271) -- 0:18:37
470000 -- (-4994.370) (-4975.554) (-4976.924) [-4969.853] * (-4980.553) (-4971.690) [-4977.656] (-4977.377) -- 0:18:35
Average standard deviation of split frequencies: 0.014886
471000 -- (-4966.526) [-4963.432] (-4975.740) (-4965.541) * [-4980.840] (-4970.337) (-4972.414) (-4986.802) -- 0:18:33
472000 -- (-4965.661) (-4980.128) [-4968.157] (-4964.178) * (-5001.764) (-4976.906) (-4986.936) [-4978.671] -- 0:18:30
473000 -- (-4983.896) [-4985.985] (-4974.767) (-4984.462) * (-5001.805) (-4983.070) [-4966.450] (-4979.867) -- 0:18:28
474000 -- (-4985.932) (-4978.815) (-4962.794) [-4964.538] * (-4977.223) [-4982.400] (-4970.189) (-4990.645) -- 0:18:27
475000 -- (-4967.453) (-4963.274) [-4967.360] (-4991.158) * (-4979.367) (-4982.873) (-4975.709) [-4968.622] -- 0:18:25
Average standard deviation of split frequencies: 0.014741
476000 -- (-4989.273) [-4964.949] (-4983.720) (-4984.816) * (-4980.591) (-4985.633) (-4973.040) [-4980.772] -- 0:18:23
477000 -- [-4973.495] (-4975.489) (-4972.355) (-4979.374) * (-4991.925) (-4976.640) (-4988.764) [-4988.074] -- 0:18:20
478000 -- (-4983.639) [-4976.819] (-4980.457) (-4988.553) * [-4974.407] (-4983.654) (-5000.254) (-4977.152) -- 0:18:18
479000 -- (-4986.056) (-4971.490) (-4991.388) [-4981.077] * (-4990.307) [-4970.103] (-4974.722) (-4974.891) -- 0:18:16
480000 -- (-4980.710) [-4977.919] (-4971.874) (-4994.411) * [-4967.921] (-4990.317) (-4996.351) (-4977.186) -- 0:18:15
Average standard deviation of split frequencies: 0.014466
481000 -- (-4985.780) [-4974.016] (-4987.987) (-4985.221) * (-4964.698) [-4972.763] (-4983.841) (-4998.009) -- 0:18:13
482000 -- (-4976.105) [-4972.099] (-4977.712) (-4999.530) * (-4965.885) [-4980.430] (-4988.617) (-5003.716) -- 0:18:10
483000 -- (-4977.415) [-4982.073] (-4982.872) (-4983.428) * (-4981.650) [-4965.961] (-4987.849) (-4986.024) -- 0:18:08
484000 -- (-4975.076) [-4967.226] (-4986.270) (-4996.244) * [-4982.379] (-4986.270) (-4986.225) (-4971.243) -- 0:18:06
485000 -- (-4992.019) (-4971.791) [-4970.800] (-4980.100) * (-4977.644) (-4985.423) (-4988.119) [-4961.066] -- 0:18:04
Average standard deviation of split frequencies: 0.014494
486000 -- (-4996.794) (-4976.907) (-4966.884) [-4966.917] * (-4976.258) (-4989.822) [-4970.210] (-4979.771) -- 0:18:01
487000 -- (-4997.437) [-4978.705] (-4979.262) (-4984.952) * [-4965.382] (-4973.065) (-4973.936) (-4961.602) -- 0:18:00
488000 -- (-4968.622) (-4988.798) [-4977.494] (-4984.856) * (-4988.056) [-4965.690] (-4971.241) (-4981.994) -- 0:17:58
489000 -- [-4970.037] (-5001.164) (-4975.043) (-4971.709) * (-4970.485) (-4989.515) [-4977.000] (-4979.838) -- 0:17:56
490000 -- (-4974.998) (-4999.376) [-4979.144] (-4964.342) * (-4983.594) (-4999.177) [-4977.200] (-4973.948) -- 0:17:54
Average standard deviation of split frequencies: 0.014157
491000 -- (-4990.388) [-4992.219] (-4974.054) (-4983.504) * (-4984.792) [-4975.486] (-4973.950) (-4969.248) -- 0:17:51
492000 -- (-4982.100) (-4981.611) (-4975.179) [-4972.601] * (-4976.436) (-4984.545) [-4970.697] (-4980.161) -- 0:17:49
493000 -- (-4990.080) (-4977.203) [-4967.027] (-4961.662) * [-4968.786] (-4978.766) (-5003.743) (-4993.447) -- 0:17:48
494000 -- (-4983.630) (-4970.833) [-4980.486] (-4977.433) * (-4970.071) [-4959.852] (-4987.049) (-4980.013) -- 0:17:46
495000 -- (-4995.816) (-4986.736) [-4972.939] (-4973.006) * (-4962.914) [-4967.332] (-4988.247) (-4977.757) -- 0:17:44
Average standard deviation of split frequencies: 0.014037
496000 -- (-4984.383) (-4989.829) [-4954.861] (-4978.074) * (-5005.781) [-4967.467] (-4977.932) (-4994.422) -- 0:17:41
497000 -- (-4986.963) [-4970.446] (-4973.090) (-4987.226) * (-4992.212) (-4966.967) (-4968.852) [-4972.528] -- 0:17:39
498000 -- (-4969.926) (-4989.498) [-4972.219] (-4994.942) * (-4983.069) (-4996.465) [-4967.048] (-4983.067) -- 0:17:37
499000 -- [-4959.946] (-5000.033) (-4977.837) (-4989.768) * (-4982.596) [-4972.460] (-4967.782) (-4982.881) -- 0:17:35
500000 -- (-4976.767) (-4988.288) [-4978.395] (-5003.107) * (-4975.491) [-4985.006] (-4975.342) (-4971.896) -- 0:17:34
Average standard deviation of split frequencies: 0.013852
501000 -- (-4994.341) (-4972.822) (-4994.083) [-4975.202] * (-4969.973) [-4971.584] (-4969.411) (-4984.174) -- 0:17:31
502000 -- (-4984.153) [-4972.112] (-4984.552) (-4967.465) * (-4979.229) [-4983.597] (-4966.472) (-4985.289) -- 0:17:29
503000 -- (-4976.246) (-5001.228) [-4973.560] (-4993.593) * (-4960.345) [-4972.321] (-4968.945) (-5003.301) -- 0:17:27
504000 -- (-4997.646) (-4971.506) [-4976.329] (-4986.572) * [-4982.462] (-4979.412) (-4974.169) (-4982.347) -- 0:17:25
505000 -- (-4996.567) (-4975.234) (-4993.881) [-4968.983] * (-4977.005) (-4969.816) [-4970.816] (-4981.788) -- 0:17:22
Average standard deviation of split frequencies: 0.013605
506000 -- (-4971.460) (-4977.080) (-4978.426) [-4959.655] * [-4970.722] (-4977.573) (-4988.921) (-4985.732) -- 0:17:20
507000 -- (-4967.836) (-4976.576) [-4971.954] (-4969.203) * [-4980.934] (-4983.563) (-4994.317) (-4973.565) -- 0:17:18
508000 -- (-4984.722) (-5001.483) [-4978.440] (-4986.321) * (-4996.087) (-4969.328) (-4998.477) [-4968.902] -- 0:17:16
509000 -- (-4972.597) (-4977.782) (-4986.150) [-4976.075] * (-4974.905) (-4970.689) [-4982.738] (-4984.477) -- 0:17:15
510000 -- (-4982.239) (-4981.853) [-4971.303] (-4982.058) * [-4966.990] (-4967.964) (-4984.161) (-4975.016) -- 0:17:12
Average standard deviation of split frequencies: 0.014073
511000 -- (-4982.464) (-4986.602) [-4978.077] (-4965.838) * (-4985.821) (-4983.701) (-4970.686) [-4967.547] -- 0:17:10
512000 -- (-4973.547) (-4987.792) (-4990.092) [-4972.623] * (-4980.541) (-4988.498) [-4987.689] (-4992.855) -- 0:17:08
513000 -- (-4985.390) (-4972.349) (-4970.541) [-4966.520] * [-4976.035] (-4976.047) (-4987.282) (-4990.793) -- 0:17:06
514000 -- (-4974.132) (-4976.661) [-4967.949] (-4969.184) * (-4992.948) [-4971.031] (-4988.375) (-4968.449) -- 0:17:04
515000 -- (-4979.792) [-4963.189] (-4994.950) (-4973.557) * (-4991.675) [-4981.600] (-4978.212) (-4982.404) -- 0:17:01
Average standard deviation of split frequencies: 0.013423
516000 -- [-4983.015] (-4977.812) (-4993.481) (-4970.956) * (-4991.501) (-4982.332) [-4964.820] (-4965.961) -- 0:16:59
517000 -- (-4973.247) (-4991.753) (-4981.254) [-4979.698] * (-4979.490) (-5001.013) [-4977.761] (-4986.914) -- 0:16:58
518000 -- (-4976.657) (-4985.329) (-4998.772) [-4965.938] * [-4975.666] (-4971.327) (-4981.160) (-4979.858) -- 0:16:56
519000 -- [-4974.098] (-4984.852) (-4994.389) (-4977.496) * (-4990.569) (-4984.914) [-4970.478] (-4970.855) -- 0:16:53
520000 -- (-4976.707) (-4988.460) (-4970.452) [-4982.014] * (-4992.295) (-4971.296) [-4987.308] (-4973.294) -- 0:16:51
Average standard deviation of split frequencies: 0.013041
521000 -- [-4974.364] (-4990.965) (-4996.222) (-4976.828) * (-4980.223) [-4973.980] (-4992.908) (-4978.041) -- 0:16:49
522000 -- (-4979.008) (-4982.519) (-4989.286) [-4972.631] * (-4988.036) (-4975.281) (-4975.553) [-4965.741] -- 0:16:47
523000 -- (-4996.537) (-4979.524) [-4973.148] (-4975.330) * (-4977.525) (-4985.971) [-4970.034] (-4969.319) -- 0:16:45
524000 -- (-4973.133) (-4981.547) [-4975.546] (-4974.739) * (-4976.887) (-4973.456) (-4984.707) [-4966.471] -- 0:16:43
525000 -- (-4985.943) [-4962.981] (-4985.197) (-4975.258) * [-4971.015] (-4992.128) (-4987.722) (-4961.623) -- 0:16:41
Average standard deviation of split frequencies: 0.012564
526000 -- (-4976.321) (-4979.725) (-4982.969) [-4978.570] * (-4972.746) [-4967.040] (-4982.690) (-4967.844) -- 0:16:39
527000 -- (-4993.607) [-4970.848] (-4970.415) (-4984.588) * (-4969.556) [-4971.397] (-5001.118) (-4986.172) -- 0:16:37
528000 -- (-4988.539) [-4972.134] (-4976.265) (-4975.168) * (-4977.228) (-4971.235) [-4970.369] (-4998.724) -- 0:16:34
529000 -- (-4975.753) (-4969.315) (-4987.254) [-4979.467] * (-4983.165) [-4972.711] (-4992.941) (-5003.893) -- 0:16:33
530000 -- (-4984.974) (-4971.702) [-4967.458] (-4980.939) * (-4977.047) (-4974.578) (-4989.900) [-4974.393] -- 0:16:31
Average standard deviation of split frequencies: 0.012351
531000 -- [-4967.903] (-4988.930) (-4980.679) (-4982.493) * (-4980.448) (-4978.363) (-4977.324) [-4959.800] -- 0:16:29
532000 -- [-4969.399] (-4978.987) (-4967.160) (-4980.942) * (-4985.675) (-4989.441) [-4979.236] (-4977.841) -- 0:16:27
533000 -- (-4973.883) [-4973.368] (-4979.701) (-4976.369) * [-4974.752] (-4966.492) (-4983.538) (-4981.951) -- 0:16:24
534000 -- (-4987.964) (-4988.482) [-4961.125] (-4969.544) * (-4968.809) (-4961.771) [-4965.742] (-4987.703) -- 0:16:22
535000 -- (-4979.195) (-4984.753) (-4973.230) [-4967.496] * (-4981.488) (-4985.746) [-4968.201] (-4986.810) -- 0:16:20
Average standard deviation of split frequencies: 0.011682
536000 -- [-4966.410] (-4992.910) (-4978.281) (-4976.438) * (-4981.286) (-4976.580) (-4978.373) [-4978.080] -- 0:16:19
537000 -- (-4984.384) [-4972.175] (-4982.210) (-4985.824) * (-4963.201) (-4984.141) [-4964.326] (-4991.443) -- 0:16:16
538000 -- (-5000.795) (-4992.088) [-4975.692] (-4973.689) * (-4961.353) [-4962.026] (-4966.805) (-4988.644) -- 0:16:14
539000 -- (-4976.340) (-4991.917) [-4973.465] (-4978.055) * [-4966.677] (-4975.457) (-4973.907) (-4970.295) -- 0:16:12
540000 -- [-4984.043] (-4984.927) (-4992.573) (-4965.729) * [-4972.168] (-4996.250) (-4961.135) (-4980.991) -- 0:16:10
Average standard deviation of split frequencies: 0.011989
541000 -- [-4974.310] (-4978.906) (-4974.166) (-4976.645) * [-4969.141] (-4993.247) (-4975.134) (-4988.426) -- 0:16:08
542000 -- (-4997.978) (-4983.930) [-4982.280] (-4971.819) * (-4994.531) (-4996.905) [-4974.532] (-4969.319) -- 0:16:05
543000 -- [-4984.749] (-4965.421) (-4980.962) (-4984.830) * (-4992.502) (-5000.069) (-4985.200) [-4974.820] -- 0:16:03
544000 -- (-4971.570) (-4969.337) [-4978.651] (-4987.137) * (-4974.513) (-4977.576) (-5007.246) [-4971.154] -- 0:16:01
545000 -- (-4979.606) (-4965.736) [-4974.059] (-4974.579) * [-4980.018] (-4998.545) (-4979.802) (-4977.622) -- 0:15:59
Average standard deviation of split frequencies: 0.011501
546000 -- (-4977.318) (-4979.703) [-4985.599] (-4986.998) * [-4966.098] (-4993.691) (-4974.936) (-5003.408) -- 0:15:57
547000 -- (-4972.274) [-4980.628] (-4978.388) (-4979.983) * [-4972.448] (-4995.442) (-4970.156) (-4990.876) -- 0:15:55
548000 -- (-4980.374) [-4968.771] (-5008.631) (-4976.269) * [-4984.478] (-4986.680) (-4983.670) (-4977.909) -- 0:15:53
549000 -- (-4977.544) (-4993.983) [-4981.138] (-4993.503) * (-4983.591) [-4970.937] (-4972.686) (-4973.177) -- 0:15:51
550000 -- (-4975.739) (-4987.266) [-4966.614] (-4994.618) * (-5007.704) (-4972.534) (-4975.527) [-4965.681] -- 0:15:49
Average standard deviation of split frequencies: 0.011290
551000 -- [-4972.297] (-4983.101) (-4985.921) (-4987.860) * (-4980.624) [-4967.022] (-4982.357) (-4972.830) -- 0:15:46
552000 -- (-5011.393) [-4967.890] (-4992.936) (-4981.782) * (-4978.737) (-4980.016) (-4979.612) [-4974.942] -- 0:15:44
553000 -- (-4979.398) (-4979.315) (-4995.925) [-4978.827] * (-5000.686) [-4964.752] (-4976.390) (-4975.737) -- 0:15:42
554000 -- (-4989.666) (-4963.028) [-4970.637] (-4980.219) * (-4979.836) (-4971.630) [-4968.212] (-4977.364) -- 0:15:40
555000 -- (-4981.112) (-4963.776) (-4984.680) [-4985.541] * (-4972.869) (-4979.078) [-4968.208] (-4963.446) -- 0:15:38
Average standard deviation of split frequencies: 0.011230
556000 -- (-4996.877) (-4977.101) (-4970.784) [-4974.758] * (-4983.315) [-4975.655] (-4971.150) (-4971.730) -- 0:15:35
557000 -- (-4988.620) (-4984.332) (-4984.009) [-4974.945] * (-4970.024) [-4979.873] (-4969.627) (-4985.409) -- 0:15:33
558000 -- (-4981.598) (-4992.462) [-4993.804] (-4977.549) * [-4963.404] (-4985.119) (-4975.927) (-4995.422) -- 0:15:32
559000 -- (-4969.875) (-5000.818) (-4975.528) [-4984.175] * (-4975.439) (-4989.637) (-4978.472) [-4974.938] -- 0:15:30
560000 -- [-4972.750] (-5007.917) (-4976.233) (-4971.065) * (-4973.674) (-4979.559) [-4967.321] (-4976.037) -- 0:15:27
Average standard deviation of split frequencies: 0.010835
561000 -- (-4988.688) (-4994.374) (-4976.933) [-4972.827] * (-4983.553) (-4985.563) [-4965.811] (-4997.420) -- 0:15:25
562000 -- (-4977.145) [-4968.811] (-4991.351) (-4995.055) * (-4978.685) (-4995.361) [-4960.776] (-4973.195) -- 0:15:23
563000 -- (-4984.462) (-4967.909) [-4967.583] (-4977.490) * (-4987.526) (-4992.300) (-4989.726) [-4963.833] -- 0:15:21
564000 -- (-4982.899) (-4993.503) (-4968.953) [-4969.319] * (-4975.186) (-4970.550) [-4974.294] (-4981.008) -- 0:15:19
565000 -- (-4991.168) (-4971.554) (-4973.818) [-4962.675] * [-4977.722] (-4976.754) (-4970.520) (-4971.372) -- 0:15:17
Average standard deviation of split frequencies: 0.009900
566000 -- (-4985.089) [-4979.865] (-4982.720) (-4972.015) * (-4986.538) (-4988.761) [-4971.502] (-4983.164) -- 0:15:15
567000 -- (-4982.295) (-4968.916) [-4960.818] (-4968.534) * (-4988.896) [-4973.308] (-4970.220) (-4961.845) -- 0:15:13
568000 -- (-4975.170) (-4984.765) (-4983.784) [-4974.552] * (-4977.505) [-4966.286] (-4986.784) (-4977.833) -- 0:15:11
569000 -- (-4989.029) [-4966.274] (-4986.026) (-4977.336) * (-4974.757) [-4967.233] (-4993.357) (-4988.319) -- 0:15:08
570000 -- (-4980.326) (-4977.561) [-4979.036] (-4973.550) * (-4978.726) (-4992.103) (-4990.541) [-4986.094] -- 0:15:06
Average standard deviation of split frequencies: 0.009383
571000 -- (-4983.095) (-4960.333) [-4968.082] (-4988.056) * (-4972.634) [-4976.032] (-5008.914) (-4990.172) -- 0:15:04
572000 -- (-4976.772) [-4972.891] (-4984.185) (-4981.212) * [-4968.768] (-4984.815) (-4990.463) (-4992.941) -- 0:15:03
573000 -- (-4982.482) [-4975.493] (-4986.494) (-4975.422) * (-4979.058) (-4982.626) (-4976.030) [-4976.252] -- 0:15:00
574000 -- (-4973.825) (-4986.270) [-4992.025] (-4981.685) * (-4977.730) [-4976.221] (-4987.866) (-4983.207) -- 0:14:58
575000 -- [-4976.875] (-5008.852) (-5004.620) (-4958.481) * (-4981.398) (-4983.600) (-4961.890) [-4973.962] -- 0:14:56
Average standard deviation of split frequencies: 0.009481
576000 -- (-4982.263) (-4994.070) (-4979.545) [-4966.224] * (-4970.832) (-5002.015) [-4963.800] (-4976.511) -- 0:14:54
577000 -- (-4989.125) (-4987.533) [-4979.787] (-4972.424) * (-4976.520) [-4986.908] (-4984.196) (-4968.748) -- 0:14:52
578000 -- (-4972.749) [-4970.896] (-4969.150) (-4983.973) * (-4995.713) (-4992.869) [-4980.056] (-4966.821) -- 0:14:49
579000 -- (-4979.913) (-4986.717) [-4971.322] (-4985.110) * (-4999.248) (-4987.913) (-4979.854) [-4966.498] -- 0:14:47
580000 -- [-4980.759] (-4976.886) (-4981.369) (-4987.170) * (-4983.107) (-4985.499) (-5010.782) [-4965.025] -- 0:14:46
Average standard deviation of split frequencies: 0.009665
581000 -- (-4989.467) [-4972.328] (-4965.735) (-4974.104) * (-4986.176) (-4992.875) (-4969.079) [-4965.104] -- 0:14:44
582000 -- (-4986.780) (-4966.769) (-4984.530) [-4980.499] * (-4988.679) [-4987.151] (-4981.259) (-4982.132) -- 0:14:41
583000 -- [-4978.374] (-4970.920) (-4970.783) (-4979.844) * (-4979.925) (-4990.993) (-4961.852) [-4970.023] -- 0:14:39
584000 -- (-4962.096) [-4986.541] (-4991.246) (-4985.617) * [-4960.815] (-4964.354) (-4983.147) (-4975.582) -- 0:14:37
585000 -- (-4974.757) (-4986.575) (-4988.119) [-4975.104] * (-4973.568) [-4970.206] (-4994.194) (-4985.586) -- 0:14:35
Average standard deviation of split frequencies: 0.009168
586000 -- [-4970.328] (-4984.263) (-5000.720) (-4973.982) * (-4973.231) [-4976.048] (-4988.570) (-4989.401) -- 0:14:33
587000 -- [-4967.323] (-4977.905) (-4987.546) (-4973.951) * (-4980.234) [-4970.305] (-4979.618) (-4973.864) -- 0:14:31
588000 -- (-4978.999) [-4970.722] (-4975.502) (-4975.522) * (-4990.714) [-4965.970] (-4994.143) (-4981.715) -- 0:14:29
589000 -- (-4967.693) [-4975.298] (-4987.708) (-4983.657) * (-4989.665) (-4987.356) (-4995.504) [-4971.821] -- 0:14:27
590000 -- (-5001.713) [-4966.166] (-4981.605) (-4984.575) * (-4955.840) [-4969.767] (-5000.275) (-4979.582) -- 0:14:25
Average standard deviation of split frequencies: 0.008779
591000 -- (-4986.897) (-4982.630) [-4975.939] (-4977.016) * (-4973.859) [-4973.484] (-4988.546) (-4974.476) -- 0:14:22
592000 -- (-4967.259) [-4974.428] (-5005.364) (-4983.656) * [-4965.772] (-4985.656) (-4990.041) (-4985.063) -- 0:14:20
593000 -- (-4969.154) (-4996.265) [-4967.856] (-4980.866) * [-4964.263] (-4973.359) (-4979.295) (-4998.626) -- 0:14:18
594000 -- (-4970.820) [-4982.573] (-4981.922) (-4985.233) * (-4978.346) (-4984.804) [-4985.780] (-4974.164) -- 0:14:17
595000 -- [-4972.979] (-4979.549) (-4984.288) (-4988.191) * (-4985.201) (-4992.032) (-4975.692) [-4975.116] -- 0:14:14
Average standard deviation of split frequencies: 0.008178
596000 -- [-4964.642] (-4975.261) (-4996.775) (-4986.679) * (-4999.497) [-4972.377] (-4988.839) (-4979.067) -- 0:14:12
597000 -- (-4996.250) [-4967.285] (-4980.531) (-4992.678) * [-4975.790] (-4971.658) (-4982.457) (-4983.692) -- 0:14:10
598000 -- (-4978.282) [-4969.255] (-4994.512) (-4982.532) * (-4998.100) [-4972.768] (-4991.094) (-4986.246) -- 0:14:08
599000 -- (-4984.427) (-4969.089) (-4972.309) [-4979.073] * (-4979.790) [-4973.204] (-4981.769) (-4971.637) -- 0:14:06
600000 -- (-4986.569) (-4981.308) [-4968.054] (-4983.986) * (-4965.058) (-4977.193) (-4980.187) [-4971.455] -- 0:14:04
Average standard deviation of split frequencies: 0.007478
601000 -- (-4973.978) [-4977.632] (-4982.413) (-4959.547) * (-4967.557) (-4983.344) [-4971.238] (-4977.243) -- 0:14:02
602000 -- (-4961.991) [-4969.875] (-4972.954) (-4971.175) * (-4957.542) (-4984.058) [-4962.629] (-4978.251) -- 0:14:00
603000 -- (-4986.943) (-4974.783) [-4969.900] (-4979.747) * (-4983.858) (-4997.736) (-4976.512) [-4973.815] -- 0:13:58
604000 -- (-4968.156) (-4978.872) [-4969.588] (-4977.163) * [-4964.053] (-5003.203) (-4990.400) (-4981.473) -- 0:13:55
605000 -- [-4983.169] (-4987.047) (-4985.596) (-4979.921) * (-4971.178) [-4978.880] (-4999.872) (-4974.743) -- 0:13:53
Average standard deviation of split frequencies: 0.007544
606000 -- (-4987.527) [-4981.348] (-5004.658) (-4995.863) * [-4962.731] (-4979.240) (-4985.459) (-4983.832) -- 0:13:52
607000 -- (-4985.762) [-4977.331] (-4986.563) (-4980.264) * [-4962.780] (-4990.922) (-4981.912) (-4990.242) -- 0:13:50
608000 -- (-4979.026) [-4969.487] (-4986.856) (-4984.455) * (-4981.096) (-4973.154) [-4969.227] (-4998.146) -- 0:13:47
609000 -- (-4970.051) [-4974.333] (-4980.420) (-4978.991) * (-4987.323) (-4977.762) [-4973.392] (-4970.572) -- 0:13:45
610000 -- (-4971.468) (-5011.568) [-4985.505] (-4978.504) * (-4986.944) (-4994.512) (-4988.457) [-4970.290] -- 0:13:43
Average standard deviation of split frequencies: 0.007239
611000 -- (-4973.147) (-4986.868) (-4978.677) [-4959.253] * (-4991.646) [-4972.498] (-4984.591) (-4962.338) -- 0:13:41
612000 -- [-4980.615] (-4981.791) (-4968.999) (-4972.968) * (-5004.005) (-4980.475) (-4958.120) [-4966.479] -- 0:13:39
613000 -- (-4983.664) (-4988.572) [-4981.929] (-4976.016) * (-4971.848) [-4977.612] (-4983.864) (-4984.022) -- 0:13:36
614000 -- (-4984.043) (-4973.632) (-4991.014) [-4974.620] * (-4983.965) (-4973.213) [-4966.865] (-5006.893) -- 0:13:34
615000 -- (-4982.335) (-4973.148) (-4976.499) [-4970.501] * (-4968.300) (-4986.374) [-4970.312] (-4978.304) -- 0:13:32
Average standard deviation of split frequencies: 0.007682
616000 -- [-4985.478] (-4962.029) (-4978.984) (-4986.867) * (-4983.273) (-4972.580) [-4964.375] (-4966.122) -- 0:13:30
617000 -- (-4980.006) (-4967.971) [-4973.167] (-4984.474) * (-4980.371) [-4963.564] (-4971.952) (-4978.502) -- 0:13:28
618000 -- [-4959.912] (-4981.655) (-4984.892) (-4992.132) * (-4999.334) (-4974.938) (-4982.635) [-4975.091] -- 0:13:26
619000 -- [-4961.509] (-4996.507) (-4983.306) (-4975.744) * (-4991.654) [-4959.133] (-4975.812) (-4985.782) -- 0:13:24
620000 -- (-4991.551) (-4982.244) (-4979.689) [-4979.499] * (-4993.161) [-4963.926] (-4972.261) (-4976.934) -- 0:13:22
Average standard deviation of split frequencies: 0.007523
621000 -- [-4969.290] (-4968.049) (-4986.905) (-4972.945) * (-4992.577) (-4974.791) (-4974.203) [-4970.041] -- 0:13:20
622000 -- (-4972.261) (-4976.837) (-4988.607) [-4969.985] * (-4980.820) [-4967.056] (-4979.411) (-4981.078) -- 0:13:17
623000 -- (-4989.572) [-4968.383] (-4973.789) (-4978.236) * (-4983.948) [-4973.746] (-4969.309) (-4987.575) -- 0:13:15
624000 -- [-4982.285] (-4968.423) (-4967.264) (-4989.426) * (-4962.168) [-4967.136] (-4971.341) (-4988.191) -- 0:13:13
625000 -- (-4995.393) [-4965.112] (-4995.210) (-4979.462) * (-4966.335) (-4966.322) [-4956.018] (-4977.863) -- 0:13:11
Average standard deviation of split frequencies: 0.007545
626000 -- [-4977.740] (-4987.082) (-4984.755) (-4974.056) * (-4978.919) (-4965.185) [-4962.160] (-4986.552) -- 0:13:09
627000 -- (-4966.843) (-4966.847) [-4986.075] (-4998.375) * (-4978.215) [-4968.126] (-4995.413) (-5004.233) -- 0:13:07
628000 -- [-4973.946] (-4960.932) (-5000.088) (-4984.680) * [-4959.584] (-4977.439) (-4991.961) (-4995.781) -- 0:13:05
629000 -- (-4983.565) [-4970.877] (-4991.374) (-4979.640) * (-4983.132) (-4976.891) [-4969.681] (-4981.605) -- 0:13:03
630000 -- [-4985.020] (-4989.236) (-4977.886) (-4977.661) * (-4964.940) (-4990.375) [-4969.861] (-4978.684) -- 0:13:01
Average standard deviation of split frequencies: 0.007963
631000 -- (-5014.488) [-4979.870] (-4988.359) (-4988.984) * (-4983.473) (-4977.413) [-4971.512] (-4990.987) -- 0:12:58
632000 -- (-4975.189) [-4980.804] (-4989.232) (-4986.177) * (-4982.953) [-4975.581] (-4971.569) (-4989.288) -- 0:12:56
633000 -- (-4982.944) [-4983.231] (-4982.341) (-4974.433) * (-4982.812) (-4981.616) (-4981.512) [-4960.261] -- 0:12:54
634000 -- [-4968.653] (-4993.354) (-4964.119) (-4990.745) * (-4978.640) (-5013.952) [-4977.134] (-4975.406) -- 0:12:52
635000 -- (-4963.866) (-5005.573) (-4980.111) [-4980.502] * [-4979.501] (-5005.368) (-4983.221) (-4975.067) -- 0:12:50
Average standard deviation of split frequencies: 0.008332
636000 -- (-4974.535) (-4986.349) (-4985.770) [-4973.100] * (-4978.026) [-4972.474] (-5008.279) (-4989.587) -- 0:12:48
637000 -- (-4970.316) (-4977.411) (-4974.970) [-4968.312] * [-4970.900] (-4973.402) (-4969.950) (-4996.032) -- 0:12:46
638000 -- (-4998.217) (-4974.219) (-4994.106) [-4966.319] * (-4965.663) [-4977.602] (-4982.383) (-5008.260) -- 0:12:44
639000 -- (-4994.314) (-4977.598) (-4977.557) [-4969.918] * [-4968.630] (-4978.152) (-4976.971) (-4985.336) -- 0:12:42
640000 -- (-4976.258) (-4981.497) (-4970.118) [-4964.127] * (-4982.249) (-4982.153) [-4976.938] (-4971.751) -- 0:12:39
Average standard deviation of split frequencies: 0.008691
641000 -- [-4969.184] (-5000.295) (-4979.926) (-4978.265) * (-4996.378) (-4982.217) [-4970.164] (-4975.796) -- 0:12:38
642000 -- [-4964.480] (-4976.617) (-4987.407) (-4979.279) * (-4983.747) (-4977.299) [-4972.925] (-4980.398) -- 0:12:36
643000 -- [-4973.181] (-4975.175) (-4981.138) (-4981.535) * (-4997.882) (-4989.444) (-4973.975) [-4967.699] -- 0:12:33
644000 -- (-4974.279) (-4986.272) (-4986.771) [-4968.731] * (-5000.986) (-4991.987) [-4976.379] (-4976.653) -- 0:12:31
645000 -- (-4980.762) (-4976.803) (-4988.471) [-4975.240] * (-4992.433) [-4972.472] (-4969.702) (-4975.033) -- 0:12:29
Average standard deviation of split frequencies: 0.008189
646000 -- [-4979.451] (-4976.515) (-4972.660) (-4990.548) * (-4986.723) (-4982.484) (-4974.223) [-4972.047] -- 0:12:27
647000 -- (-4967.525) [-4973.944] (-4986.486) (-4973.020) * (-4976.567) (-4972.560) (-4982.299) [-4985.228] -- 0:12:25
648000 -- (-4979.399) [-4967.620] (-4984.304) (-4985.606) * (-4973.133) [-4967.435] (-4989.494) (-4987.854) -- 0:12:23
649000 -- (-4983.508) (-4984.056) (-4969.934) [-4973.031] * (-4972.173) (-4984.578) (-4992.735) [-4977.932] -- 0:12:21
650000 -- (-4982.044) (-4983.962) [-4961.396] (-4987.650) * (-4983.272) [-4971.073] (-4979.242) (-4985.365) -- 0:12:19
Average standard deviation of split frequencies: 0.007983
651000 -- (-4984.853) [-4973.862] (-4995.211) (-4986.039) * (-5000.111) (-4967.824) (-4973.044) [-4975.761] -- 0:12:17
652000 -- (-4972.022) (-4988.782) (-4981.210) [-4981.919] * (-4980.703) (-4979.091) [-4962.312] (-4988.427) -- 0:12:14
653000 -- (-4970.942) (-4977.608) (-4986.676) [-4964.282] * (-4971.302) (-4962.066) [-4962.389] (-4979.400) -- 0:12:12
654000 -- (-4977.676) (-4989.324) [-4958.626] (-4959.735) * (-4981.867) [-4974.921] (-4990.993) (-4995.300) -- 0:12:11
655000 -- [-4977.816] (-4990.426) (-4980.674) (-4966.037) * [-4976.782] (-4980.965) (-4981.268) (-4967.768) -- 0:12:08
Average standard deviation of split frequencies: 0.007745
656000 -- (-5015.360) (-4976.787) (-4967.848) [-4974.423] * (-4976.222) [-4978.297] (-4976.936) (-5001.179) -- 0:12:06
657000 -- (-4986.251) [-4963.828] (-4964.750) (-4996.086) * (-4981.252) [-4973.931] (-4982.375) (-4993.263) -- 0:12:04
658000 -- (-4992.560) [-4966.925] (-4969.950) (-4980.276) * (-4985.038) [-4968.684] (-4982.170) (-4988.137) -- 0:12:02
659000 -- (-5000.181) (-4969.891) [-4962.049] (-4980.735) * (-4974.506) [-4975.405] (-4969.920) (-4990.559) -- 0:12:00
660000 -- (-5002.296) (-4964.688) [-4980.110] (-4971.202) * [-4970.309] (-4989.116) (-4998.384) (-5000.008) -- 0:11:58
Average standard deviation of split frequencies: 0.008192
661000 -- (-4996.629) (-4974.278) [-4970.370] (-4981.448) * (-4977.430) [-4973.212] (-4997.094) (-4987.017) -- 0:11:55
662000 -- (-4987.934) [-4969.865] (-4966.153) (-4979.178) * (-4987.482) (-4972.559) [-4961.921] (-4996.229) -- 0:11:53
663000 -- [-4974.196] (-4990.427) (-4973.325) (-4973.641) * [-4969.728] (-4995.797) (-4996.377) (-5012.071) -- 0:11:52
664000 -- (-4996.286) [-4986.025] (-4981.605) (-4975.981) * [-4972.412] (-4989.916) (-4984.830) (-4985.690) -- 0:11:49
665000 -- (-4981.455) (-4978.833) [-4963.310] (-4978.722) * (-4980.359) [-4976.729] (-4990.764) (-4978.753) -- 0:11:47
Average standard deviation of split frequencies: 0.008376
666000 -- (-4987.597) (-4975.606) (-4974.024) [-4975.988] * [-4975.026] (-4997.269) (-4996.692) (-4970.915) -- 0:11:45
667000 -- (-4986.060) (-4989.762) [-4980.165] (-4972.244) * (-4989.912) [-4968.263] (-4978.217) (-4969.935) -- 0:11:43
668000 -- (-4980.252) (-4979.700) (-4988.831) [-4973.287] * (-4972.631) [-4960.205] (-4996.677) (-4985.025) -- 0:11:41
669000 -- (-4984.686) (-4971.547) [-4993.865] (-4993.013) * (-4973.143) (-4982.631) (-4987.046) [-4976.688] -- 0:11:39
670000 -- (-4985.224) (-4976.221) [-4979.172] (-4978.725) * (-4988.166) (-4985.210) (-4988.753) [-4976.306] -- 0:11:36
Average standard deviation of split frequencies: 0.008513
671000 -- [-4977.312] (-4979.483) (-4988.590) (-4976.028) * (-4979.351) (-5000.524) (-5006.607) [-4988.811] -- 0:11:34
672000 -- [-4975.335] (-4984.609) (-4988.612) (-4989.437) * (-4970.720) (-4961.961) (-4996.465) [-4979.769] -- 0:11:33
673000 -- (-4980.673) [-4973.372] (-4976.385) (-4978.042) * (-4982.649) [-4973.346] (-4974.785) (-5003.808) -- 0:11:30
674000 -- (-4968.274) (-4992.075) [-4962.100] (-4986.494) * (-4979.863) (-4976.062) [-4977.302] (-4990.820) -- 0:11:28
675000 -- (-4986.863) (-4981.762) (-4969.970) [-4982.364] * [-4970.832] (-4983.292) (-4988.236) (-4979.248) -- 0:11:26
Average standard deviation of split frequencies: 0.008579
676000 -- (-4975.023) [-4962.739] (-4982.976) (-4981.394) * [-4965.608] (-4990.107) (-4986.102) (-4988.004) -- 0:11:24
677000 -- (-4970.575) (-4973.796) (-4976.046) [-4981.855] * [-4968.613] (-4993.268) (-4995.101) (-4986.554) -- 0:11:22
678000 -- (-5004.851) [-4973.696] (-4975.260) (-4986.135) * (-4972.758) (-4992.590) (-4988.686) [-4979.432] -- 0:11:20
679000 -- (-4974.624) (-4981.781) [-4977.662] (-4992.981) * [-4970.916] (-5005.688) (-4969.388) (-4982.661) -- 0:11:17
680000 -- (-4974.156) (-4983.707) [-4963.171] (-4983.861) * [-4982.613] (-4979.434) (-4979.719) (-4978.673) -- 0:11:16
Average standard deviation of split frequencies: 0.008036
681000 -- (-4965.983) (-4982.146) [-4960.757] (-4981.810) * (-4998.266) [-4964.723] (-4969.685) (-4993.050) -- 0:11:14
682000 -- [-4970.171] (-4966.835) (-4973.443) (-4995.923) * (-4977.948) [-4981.371] (-4978.603) (-4973.512) -- 0:11:11
683000 -- (-4985.108) (-4985.388) (-4996.062) [-4977.056] * (-4983.418) (-4973.469) (-4994.931) [-4971.817] -- 0:11:09
684000 -- (-4968.089) (-4990.206) [-4975.173] (-4978.773) * [-4966.919] (-5000.704) (-5027.862) (-4971.839) -- 0:11:07
685000 -- (-4990.046) [-4973.829] (-4981.659) (-4986.200) * (-4988.417) (-4978.383) [-4973.987] (-4968.947) -- 0:11:05
Average standard deviation of split frequencies: 0.008259
686000 -- (-4979.729) (-4979.570) (-5001.790) [-4966.019] * (-4977.766) (-4976.443) (-4967.466) [-4968.975] -- 0:11:03
687000 -- [-4960.692] (-4975.010) (-4990.816) (-4977.054) * [-4979.629] (-4973.311) (-4977.696) (-4980.101) -- 0:11:01
688000 -- (-4991.562) (-4994.357) [-4980.041] (-4977.403) * (-4981.534) (-4968.927) (-4997.037) [-4968.764] -- 0:10:59
689000 -- (-4995.640) (-4961.772) [-4985.544] (-4982.850) * [-4977.661] (-4981.062) (-4981.498) (-4964.489) -- 0:10:57
690000 -- (-4980.225) (-4991.677) (-4989.389) [-4968.692] * (-4972.973) (-4999.381) (-4963.304) [-4979.923] -- 0:10:55
Average standard deviation of split frequencies: 0.007979
691000 -- (-4970.820) (-4990.552) [-4977.852] (-4976.424) * [-4976.598] (-4974.641) (-4978.446) (-4975.006) -- 0:10:52
692000 -- (-4978.838) (-4970.207) [-4979.904] (-4971.385) * (-4970.075) [-4969.283] (-4988.113) (-5002.785) -- 0:10:50
693000 -- (-4977.937) (-4988.965) (-4994.213) [-4968.248] * (-4971.816) [-4968.395] (-4979.092) (-4995.607) -- 0:10:48
694000 -- (-4987.801) (-4974.395) (-4996.621) [-4969.427] * (-4978.555) [-4965.375] (-4981.432) (-4997.857) -- 0:10:46
695000 -- (-4974.828) [-4968.431] (-4978.742) (-4990.235) * (-4973.821) [-4968.495] (-4981.952) (-4985.541) -- 0:10:44
Average standard deviation of split frequencies: 0.007940
696000 -- (-4982.320) [-4970.056] (-4997.723) (-4992.526) * (-4977.265) (-4970.886) (-4995.632) [-4985.195] -- 0:10:42
697000 -- (-4978.346) [-4981.129] (-5004.256) (-4984.812) * (-4976.180) (-4974.361) [-4968.812] (-4970.975) -- 0:10:40
698000 -- (-4980.588) [-4966.833] (-4992.779) (-4973.177) * (-4998.321) (-4969.721) [-4969.188] (-4979.824) -- 0:10:38
699000 -- (-4982.483) (-4989.220) [-4975.998] (-4988.243) * (-4997.323) (-4992.597) [-4984.671] (-4978.662) -- 0:10:36
700000 -- (-4983.639) (-4971.828) (-4979.023) [-4968.820] * (-4979.603) (-4971.565) (-4977.768) [-4980.771] -- 0:10:33
Average standard deviation of split frequencies: 0.008024
701000 -- (-4991.556) (-4992.801) (-4982.152) [-4973.235] * (-4979.515) (-4971.512) [-4980.971] (-4987.053) -- 0:10:31
702000 -- (-5007.480) (-4977.763) (-4977.940) [-4974.025] * (-4979.430) (-4969.932) (-4976.088) [-4965.589] -- 0:10:29
703000 -- (-4981.059) [-4966.646] (-4987.017) (-4978.327) * (-4999.081) (-4963.410) [-4981.422] (-4996.367) -- 0:10:27
704000 -- (-4991.587) [-4984.075] (-4983.017) (-4983.288) * (-4978.114) (-4973.914) [-4986.547] (-4991.372) -- 0:10:25
705000 -- (-4979.982) [-4963.351] (-5002.712) (-4970.272) * (-4994.654) [-4964.668] (-4991.187) (-4978.823) -- 0:10:23
Average standard deviation of split frequencies: 0.008025
706000 -- (-4982.818) (-4968.329) (-4996.402) [-4966.797] * (-4975.459) [-4981.396] (-4996.622) (-4979.560) -- 0:10:21
707000 -- (-4968.774) [-4966.624] (-5001.346) (-4967.937) * (-4971.979) [-4972.271] (-4976.981) (-4982.860) -- 0:10:19
708000 -- (-4979.064) (-4985.664) (-4984.517) [-4964.507] * (-4971.701) [-4977.141] (-4978.225) (-4997.338) -- 0:10:16
709000 -- (-4974.511) [-4976.629] (-4996.011) (-4990.362) * [-4981.620] (-4985.133) (-4979.877) (-4986.647) -- 0:10:14
710000 -- (-4978.230) (-4964.548) [-4982.591] (-4983.460) * (-4995.430) (-4966.479) (-4964.042) [-4973.084] -- 0:10:12
Average standard deviation of split frequencies: 0.007972
711000 -- (-4972.909) [-4964.098] (-4972.225) (-4976.516) * [-4980.224] (-4972.301) (-4976.695) (-4975.820) -- 0:10:10
712000 -- (-4981.992) [-4969.765] (-4991.399) (-4974.643) * [-4970.112] (-4982.208) (-4985.187) (-4972.968) -- 0:10:08
713000 -- (-4974.586) (-4991.017) (-4986.481) [-4974.585] * [-4963.360] (-4988.672) (-4967.321) (-4972.342) -- 0:10:06
714000 -- [-4966.676] (-5019.685) (-4983.966) (-4992.319) * (-4988.323) (-4984.876) (-4967.018) [-4964.682] -- 0:10:04
715000 -- [-4969.108] (-4977.718) (-4975.861) (-4979.202) * (-4983.980) (-4994.645) (-4975.979) [-4968.153] -- 0:10:02
Average standard deviation of split frequencies: 0.007805
716000 -- (-4978.511) (-4992.799) [-4979.269] (-4974.581) * (-4977.358) (-4985.990) (-4991.539) [-4974.714] -- 0:10:00
717000 -- (-4983.200) (-4973.620) (-4977.471) [-4976.158] * (-4979.752) (-4968.982) [-4968.690] (-4979.195) -- 0:09:58
718000 -- (-4977.592) (-4971.706) [-4967.497] (-4972.809) * (-4974.293) [-4966.706] (-5001.185) (-4991.464) -- 0:09:56
719000 -- [-4970.589] (-4984.627) (-4985.836) (-4968.380) * (-4976.911) [-4981.433] (-4979.639) (-4981.552) -- 0:09:54
720000 -- [-4971.803] (-4969.733) (-4980.541) (-4974.881) * (-4976.167) (-4969.060) (-4966.788) [-4986.286] -- 0:09:51
Average standard deviation of split frequencies: 0.008084
721000 -- (-4975.125) (-4968.339) [-4982.561] (-4970.723) * (-4983.915) [-4972.156] (-5004.857) (-4969.968) -- 0:09:49
722000 -- [-4963.108] (-4973.213) (-4978.888) (-4990.926) * [-4962.279] (-4982.799) (-4975.973) (-4992.360) -- 0:09:47
723000 -- (-4972.250) (-4979.268) (-4979.889) [-4976.659] * (-4988.811) [-4985.856] (-4979.001) (-4983.203) -- 0:09:45
724000 -- (-4982.761) [-4958.352] (-4987.854) (-4963.562) * (-4998.457) (-4999.502) [-4989.589] (-4973.813) -- 0:09:43
725000 -- (-4968.334) [-4974.758] (-4985.686) (-4963.124) * [-4980.839] (-4968.975) (-4982.440) (-4970.087) -- 0:09:41
Average standard deviation of split frequencies: 0.007876
726000 -- (-4964.278) [-4975.143] (-4990.410) (-4980.512) * (-4977.399) [-4961.450] (-4976.350) (-4974.612) -- 0:09:39
727000 -- [-4986.252] (-4982.332) (-4992.657) (-4982.974) * (-4991.249) (-4983.599) (-4997.908) [-4973.821] -- 0:09:37
728000 -- (-4990.389) [-4976.291] (-4993.997) (-4982.558) * (-4976.964) (-4981.596) (-5006.253) [-4975.491] -- 0:09:35
729000 -- [-4968.096] (-4977.420) (-4983.540) (-4977.379) * [-4966.560] (-4978.303) (-4982.750) (-4993.096) -- 0:09:32
730000 -- (-4978.419) (-4972.499) (-4990.614) [-4960.489] * (-4977.260) (-4994.519) [-4973.795] (-4990.937) -- 0:09:30
Average standard deviation of split frequencies: 0.007563
731000 -- (-4991.908) (-4972.877) (-4977.961) [-4962.100] * (-4977.400) (-4972.227) [-4986.214] (-4990.082) -- 0:09:28
732000 -- (-4985.135) (-4977.530) (-4983.133) [-4970.544] * (-4975.641) (-4975.456) (-4989.702) [-4977.778] -- 0:09:26
733000 -- (-4982.780) (-4985.871) [-4975.227] (-4971.263) * [-4968.015] (-4992.919) (-4980.086) (-4995.671) -- 0:09:24
734000 -- (-4994.584) (-4998.685) [-4975.203] (-4972.790) * (-4990.330) (-4977.335) [-4976.032] (-4971.133) -- 0:09:22
735000 -- [-4981.236] (-4998.095) (-4975.319) (-4970.678) * (-4979.898) (-4981.429) [-4969.404] (-4980.998) -- 0:09:20
Average standard deviation of split frequencies: 0.007481
736000 -- (-4964.117) (-5002.712) (-5004.184) [-4977.593] * (-4993.033) (-4988.337) (-4972.901) [-4964.407] -- 0:09:18
737000 -- (-4974.077) (-4981.507) [-4989.954] (-4972.320) * [-4986.110] (-4976.885) (-4971.806) (-4980.257) -- 0:09:15
738000 -- (-4986.860) (-4986.267) (-4974.432) [-4976.042] * [-4970.559] (-4978.668) (-4971.744) (-4993.491) -- 0:09:13
739000 -- [-4985.058] (-4964.965) (-4987.296) (-5001.062) * [-4986.715] (-4983.529) (-4975.240) (-5007.807) -- 0:09:11
740000 -- [-4979.603] (-4986.759) (-4980.427) (-4976.406) * (-4995.855) (-4983.825) (-4985.639) [-4978.264] -- 0:09:09
Average standard deviation of split frequencies: 0.007661
741000 -- (-4979.262) [-4976.981] (-4985.561) (-4985.791) * (-4988.422) (-4975.163) [-4982.792] (-4962.678) -- 0:09:07
742000 -- (-4977.898) (-4994.445) (-4973.867) [-4971.021] * (-4981.412) [-4988.712] (-4982.434) (-4983.467) -- 0:09:05
743000 -- (-5007.481) [-4976.954] (-4981.997) (-4984.738) * [-4967.767] (-4979.427) (-4975.331) (-4986.800) -- 0:09:03
744000 -- (-5002.899) [-4982.872] (-4988.318) (-4975.761) * [-4959.440] (-4989.584) (-4982.624) (-4978.510) -- 0:09:01
745000 -- (-4984.555) [-4968.921] (-4978.257) (-4979.500) * [-4964.090] (-4981.730) (-4988.509) (-4995.558) -- 0:08:59
Average standard deviation of split frequencies: 0.007770
746000 -- [-4976.345] (-4986.067) (-4987.754) (-5004.236) * (-4974.720) [-4981.429] (-5000.797) (-4992.395) -- 0:08:56
747000 -- (-4995.749) [-4973.113] (-4981.069) (-4968.170) * (-4987.868) (-4993.568) [-4969.417] (-4984.838) -- 0:08:54
748000 -- (-4998.736) [-4965.661] (-4976.622) (-4965.903) * [-4974.909] (-4976.125) (-4996.545) (-4987.449) -- 0:08:52
749000 -- (-4979.939) (-4980.402) (-4977.461) [-4969.190] * (-4982.557) (-4976.155) (-4985.454) [-4972.361] -- 0:08:50
750000 -- [-4976.025] (-4977.046) (-4984.412) (-4977.362) * [-4972.730] (-4977.789) (-4981.740) (-4979.028) -- 0:08:48
Average standard deviation of split frequencies: 0.008198
751000 -- (-4975.201) [-4970.130] (-4974.574) (-5006.335) * (-4990.173) (-4985.482) (-4972.866) [-4969.201] -- 0:08:46
752000 -- (-4990.105) (-4969.465) (-4978.513) [-4987.794] * (-4998.975) (-4968.628) (-4983.351) [-4957.498] -- 0:08:44
753000 -- (-4990.571) (-4968.422) [-4969.718] (-4980.478) * [-4982.462] (-4988.477) (-4998.743) (-4972.168) -- 0:08:42
754000 -- [-4980.478] (-4976.894) (-4976.832) (-4990.256) * (-4990.502) [-4976.868] (-4972.691) (-4992.401) -- 0:08:40
755000 -- (-4983.021) (-4984.109) [-5005.048] (-4991.710) * (-4975.313) [-4963.754] (-4983.236) (-5003.351) -- 0:08:37
Average standard deviation of split frequencies: 0.007979
756000 -- [-4970.588] (-4981.091) (-4994.424) (-5001.914) * [-4978.153] (-4983.214) (-4989.354) (-4986.750) -- 0:08:35
757000 -- (-4980.478) (-4978.447) (-5000.962) [-4987.179] * [-4981.035] (-4973.084) (-4985.612) (-4979.809) -- 0:08:33
758000 -- (-4973.928) [-4971.162] (-4995.764) (-4983.758) * (-4967.803) (-4981.565) (-4972.375) [-4974.787] -- 0:08:31
759000 -- (-4992.963) [-4966.527] (-4986.360) (-4992.357) * [-4969.908] (-4985.006) (-4969.235) (-4983.472) -- 0:08:29
760000 -- [-4974.360] (-4969.204) (-5003.371) (-5000.551) * (-5001.158) (-4974.405) [-4959.809] (-4988.670) -- 0:08:27
Average standard deviation of split frequencies: 0.007448
761000 -- (-4990.328) [-4962.777] (-4978.722) (-4979.918) * (-4989.158) (-4987.732) (-4963.101) [-4970.688] -- 0:08:25
762000 -- (-4991.673) [-4968.696] (-4981.899) (-4969.475) * (-4975.176) (-4958.538) [-4979.792] (-4978.453) -- 0:08:23
763000 -- (-4984.331) (-4972.912) (-4967.044) [-4971.833] * (-4980.028) [-4961.242] (-4985.379) (-4977.630) -- 0:08:21
764000 -- (-4989.111) (-4978.045) (-4979.348) [-4979.849] * (-4992.137) (-4965.245) (-4983.484) [-4963.354] -- 0:08:18
765000 -- (-4973.876) (-4988.564) (-4994.461) [-4977.121] * (-4987.727) [-4978.863] (-4974.479) (-4977.504) -- 0:08:16
Average standard deviation of split frequencies: 0.007670
766000 -- (-4994.579) (-4993.237) (-4981.371) [-4974.720] * (-4968.789) (-4994.152) (-4969.775) [-4970.796] -- 0:08:14
767000 -- [-4992.073] (-4976.385) (-4971.296) (-4989.586) * [-4975.449] (-4990.975) (-4982.574) (-4977.850) -- 0:08:12
768000 -- [-4987.645] (-4986.072) (-4977.607) (-5002.192) * (-4976.457) (-4985.671) [-4964.295] (-4987.734) -- 0:08:10
769000 -- (-4975.080) (-4997.895) [-4965.048] (-4983.383) * (-4980.986) (-4993.370) [-4978.692] (-4992.194) -- 0:08:08
770000 -- (-4969.413) [-4969.410] (-4969.713) (-4982.731) * (-4981.296) (-4991.989) [-4978.087] (-4979.421) -- 0:08:05
Average standard deviation of split frequencies: 0.007680
771000 -- (-4986.991) (-4963.510) (-4982.210) [-4978.011] * (-4976.102) (-4989.359) [-4965.432] (-4993.501) -- 0:08:04
772000 -- (-4994.188) (-4974.106) (-4980.473) [-4989.082] * [-4981.045] (-4984.719) (-4989.600) (-4987.015) -- 0:08:01
773000 -- (-4978.223) (-5005.801) [-4965.117] (-4986.964) * (-4982.494) [-4974.799] (-4986.791) (-4978.289) -- 0:07:59
774000 -- (-4977.923) (-4985.913) (-4982.334) [-4973.098] * (-4982.474) (-4982.839) [-4979.751] (-4974.785) -- 0:07:57
775000 -- (-4981.371) (-4972.274) (-4996.424) [-4974.263] * (-4995.166) (-4999.997) (-4979.689) [-4969.674] -- 0:07:55
Average standard deviation of split frequencies: 0.007650
776000 -- [-4982.888] (-4985.593) (-4978.518) (-4979.245) * (-5002.181) (-4997.599) (-4974.250) [-4964.010] -- 0:07:53
777000 -- (-4977.326) [-4975.399] (-4969.782) (-4969.492) * (-4987.612) (-4985.994) [-4976.942] (-4977.506) -- 0:07:51
778000 -- (-4979.932) (-4965.660) [-4967.620] (-4976.299) * (-4987.430) [-4976.222] (-4981.020) (-4961.907) -- 0:07:49
779000 -- [-4976.478] (-4972.977) (-4983.698) (-4960.601) * [-4974.649] (-4971.904) (-4978.953) (-4968.438) -- 0:07:47
780000 -- (-4979.247) (-4969.252) [-4966.069] (-4975.944) * [-4973.381] (-4992.204) (-4984.164) (-4979.784) -- 0:07:45
Average standard deviation of split frequencies: 0.007213
781000 -- (-4980.641) (-4977.901) (-4980.397) [-4971.542] * (-4989.079) (-4967.572) [-4963.135] (-4971.834) -- 0:07:42
782000 -- (-4970.891) [-4973.124] (-4985.029) (-4964.266) * (-4986.779) [-4982.068] (-4970.375) (-4971.153) -- 0:07:40
783000 -- (-4982.189) [-4969.922] (-4998.118) (-4974.906) * (-4991.802) (-4990.319) (-4968.558) [-4980.063] -- 0:07:38
784000 -- [-4985.833] (-4973.725) (-4993.968) (-4975.850) * [-4974.992] (-4980.873) (-4979.307) (-4986.414) -- 0:07:36
785000 -- (-4990.364) [-4968.600] (-4970.869) (-4983.821) * (-4992.887) (-4984.662) (-4970.831) [-4963.229] -- 0:07:34
Average standard deviation of split frequencies: 0.007164
786000 -- (-4983.480) [-4980.310] (-4994.723) (-4977.642) * [-4972.795] (-4980.757) (-4959.101) (-4977.519) -- 0:07:32
787000 -- [-4986.567] (-4971.299) (-4982.548) (-4983.579) * [-4974.582] (-4981.964) (-4968.542) (-4981.466) -- 0:07:30
788000 -- (-4990.482) (-4973.937) [-4977.559] (-4997.698) * [-4975.390] (-4976.507) (-4975.202) (-4988.155) -- 0:07:28
789000 -- (-4980.321) (-4977.536) [-4971.809] (-4986.082) * (-4972.315) [-4967.856] (-4984.783) (-4989.424) -- 0:07:26
790000 -- (-4964.355) (-5004.301) [-4980.086] (-4982.119) * (-4974.714) [-4971.108] (-4980.015) (-4978.241) -- 0:07:23
Average standard deviation of split frequencies: 0.007177
791000 -- (-4973.650) (-4980.686) [-4967.143] (-4985.822) * (-4973.456) (-4976.764) (-4985.410) [-4974.187] -- 0:07:21
792000 -- (-4966.722) (-4993.807) [-4971.707] (-5005.564) * (-4973.060) (-4979.277) (-4995.800) [-4966.820] -- 0:07:19
793000 -- (-4974.229) (-4975.603) [-4965.514] (-4991.544) * (-4971.497) (-4971.050) (-5017.169) [-4964.695] -- 0:07:17
794000 -- (-4967.251) (-4988.296) [-4984.823] (-4980.482) * [-4979.645] (-4977.828) (-4986.266) (-4979.036) -- 0:07:15
795000 -- (-4978.201) (-4982.707) (-4984.015) [-4960.402] * (-4987.657) (-4981.375) [-4984.415] (-4974.425) -- 0:07:13
Average standard deviation of split frequencies: 0.007150
796000 -- (-4979.820) [-4961.478] (-4987.914) (-4987.607) * [-4981.150] (-4983.648) (-4979.087) (-4964.780) -- 0:07:11
797000 -- (-4970.200) [-4980.758] (-4990.125) (-4980.957) * (-4990.551) [-4973.127] (-4992.679) (-4979.500) -- 0:07:09
798000 -- (-4976.761) [-4970.563] (-4975.607) (-4980.971) * (-4986.309) [-4965.955] (-4994.384) (-4960.115) -- 0:07:07
799000 -- (-4970.202) (-4972.421) [-4975.819] (-4974.633) * (-4995.224) [-4968.711] (-4986.401) (-4960.130) -- 0:07:05
800000 -- (-4966.890) (-4987.086) [-4983.158] (-4981.657) * (-4974.688) (-4969.741) (-4981.280) [-4968.856] -- 0:07:03
Average standard deviation of split frequencies: 0.007187
801000 -- (-4976.612) (-4987.652) (-4975.198) [-4984.180] * (-4988.231) (-4980.594) [-4972.911] (-4974.984) -- 0:07:00
802000 -- (-4984.142) (-4986.898) [-4973.587] (-4974.209) * (-4981.063) (-4963.219) [-4977.300] (-4985.637) -- 0:06:58
803000 -- [-4980.278] (-4974.746) (-4979.083) (-4975.526) * (-4978.549) (-4977.545) [-4975.160] (-4981.350) -- 0:06:56
804000 -- (-4995.694) [-4970.735] (-4977.598) (-4985.882) * [-4968.919] (-4978.748) (-4978.073) (-4982.807) -- 0:06:54
805000 -- (-4985.194) (-4984.521) [-4973.097] (-4985.230) * [-4971.453] (-4978.575) (-4976.591) (-4982.791) -- 0:06:52
Average standard deviation of split frequencies: 0.006715
806000 -- (-4961.113) (-4969.438) [-4977.585] (-4984.461) * (-4976.432) [-4972.322] (-4978.535) (-4975.106) -- 0:06:50
807000 -- (-4973.356) (-4976.299) [-4975.060] (-4980.807) * (-4971.344) (-4977.728) [-4968.951] (-4979.766) -- 0:06:48
808000 -- (-4989.083) [-4974.600] (-4977.901) (-4992.483) * (-4961.933) (-4973.808) (-4983.550) [-4964.814] -- 0:06:46
809000 -- (-4966.487) (-4972.652) (-4980.191) [-4974.044] * [-4978.794] (-4961.035) (-4996.917) (-4976.735) -- 0:06:43
810000 -- (-4979.731) [-4964.906] (-4973.062) (-4976.775) * (-4977.608) [-4978.127] (-4996.672) (-4977.576) -- 0:06:41
Average standard deviation of split frequencies: 0.006452
811000 -- (-4983.323) (-4977.443) (-4985.071) [-4966.028] * (-4977.231) (-4988.478) (-4972.035) [-4980.195] -- 0:06:39
812000 -- (-4995.768) [-4962.345] (-4977.005) (-4984.596) * [-4968.998] (-4988.845) (-4977.893) (-4973.889) -- 0:06:37
813000 -- (-4995.646) (-4980.956) [-4966.246] (-4978.916) * (-4988.581) (-4987.854) (-4991.939) [-4980.524] -- 0:06:35
814000 -- (-4998.961) (-4977.140) [-4967.054] (-4963.343) * (-4997.354) [-4974.360] (-4977.858) (-4976.233) -- 0:06:33
815000 -- (-5000.570) [-4975.435] (-4975.916) (-4976.453) * (-4986.101) (-4975.403) (-4972.397) [-4966.308] -- 0:06:31
Average standard deviation of split frequencies: 0.006499
816000 -- (-4985.845) (-4984.329) [-4967.867] (-4963.860) * [-4977.504] (-4974.575) (-4974.563) (-4986.660) -- 0:06:29
817000 -- (-5009.455) [-4988.574] (-4976.968) (-4974.401) * (-4966.766) (-4994.740) [-4970.073] (-4972.222) -- 0:06:27
818000 -- (-4994.197) [-4989.894] (-4985.383) (-4978.335) * [-4974.428] (-4969.269) (-4973.763) (-4986.744) -- 0:06:24
819000 -- (-4985.727) (-4985.265) (-4980.290) [-4983.781] * [-4967.573] (-4987.073) (-4987.752) (-4982.187) -- 0:06:22
820000 -- (-4970.125) (-5002.178) [-4975.589] (-4965.727) * (-4976.706) (-4974.118) (-4981.660) [-4973.459] -- 0:06:20
Average standard deviation of split frequencies: 0.006449
821000 -- [-4970.580] (-4991.411) (-5003.910) (-4964.499) * [-4974.657] (-4969.307) (-4995.799) (-4975.493) -- 0:06:18
822000 -- [-4970.464] (-4994.443) (-4976.721) (-4971.330) * (-4996.335) [-4988.916] (-4989.518) (-4982.000) -- 0:06:16
823000 -- (-4970.211) (-4994.481) (-4993.519) [-4974.924] * (-4980.414) (-4976.036) [-4981.493] (-4989.858) -- 0:06:14
824000 -- (-4980.184) (-4995.985) (-4976.716) [-4975.129] * (-4967.106) (-4981.957) (-4981.004) [-4970.017] -- 0:06:12
825000 -- (-4992.037) (-4972.072) [-4971.101] (-4983.756) * (-4974.801) [-4984.819] (-4992.290) (-4964.391) -- 0:06:10
Average standard deviation of split frequencies: 0.006701
826000 -- (-4977.606) (-4987.461) [-4971.372] (-4982.927) * (-4984.702) (-4988.463) [-4964.341] (-4968.804) -- 0:06:08
827000 -- (-4969.493) [-4980.304] (-4978.061) (-4987.560) * (-4985.855) (-4987.314) [-4975.527] (-4971.290) -- 0:06:05
828000 -- (-4976.440) [-4962.110] (-4980.664) (-4976.792) * [-4981.145] (-4975.279) (-4980.954) (-4964.776) -- 0:06:03
829000 -- (-4974.419) [-4966.273] (-4975.191) (-4989.661) * (-4999.153) (-4970.704) (-4969.791) [-4969.952] -- 0:06:01
830000 -- (-4986.189) (-4973.989) (-4976.421) [-4964.942] * (-4979.449) (-4976.635) [-4965.089] (-4979.077) -- 0:05:59
Average standard deviation of split frequencies: 0.006899
831000 -- (-4979.048) (-4972.063) (-4983.523) [-4963.721] * (-4996.862) (-4981.727) (-4979.026) [-4972.224] -- 0:05:57
832000 -- (-4992.959) (-4987.549) (-4971.210) [-4966.285] * (-4995.090) (-4994.919) (-4982.249) [-4974.197] -- 0:05:55
833000 -- (-4988.127) [-4975.241] (-4982.778) (-4975.556) * [-4966.373] (-4980.634) (-4979.900) (-4995.818) -- 0:05:53
834000 -- (-4977.107) (-4997.305) (-4986.909) [-4979.019] * (-4975.680) (-4983.792) [-4971.612] (-4988.044) -- 0:05:51
835000 -- [-4971.112] (-4992.345) (-4974.867) (-4969.898) * (-5002.623) (-4981.155) (-4988.053) [-4969.595] -- 0:05:48
Average standard deviation of split frequencies: 0.007092
836000 -- (-4967.088) (-4978.495) [-4980.913] (-4995.978) * (-4989.451) (-4982.738) (-4983.742) [-4969.160] -- 0:05:46
837000 -- (-4972.245) (-4963.372) [-4967.583] (-4992.655) * (-4971.395) (-4987.494) (-4984.795) [-4967.199] -- 0:05:44
838000 -- (-4973.349) (-4971.877) [-4967.089] (-4977.918) * (-5001.423) [-4970.172] (-4978.438) (-4974.151) -- 0:05:42
839000 -- (-4995.623) (-4976.806) [-4974.033] (-4997.775) * (-4971.784) (-4968.981) (-4979.982) [-4969.203] -- 0:05:40
840000 -- (-4995.361) (-4984.964) [-4969.140] (-4991.470) * [-4967.225] (-5011.330) (-4986.381) (-4976.277) -- 0:05:38
Average standard deviation of split frequencies: 0.007182
841000 -- (-4982.775) (-4982.654) [-4968.041] (-4970.406) * (-4968.923) (-4992.828) (-4990.393) [-4968.440] -- 0:05:36
842000 -- (-4973.778) (-4983.049) (-4964.090) [-4961.260] * (-4972.426) (-4998.242) (-4966.892) [-4981.575] -- 0:05:34
843000 -- (-4996.229) (-4978.664) [-4970.233] (-4974.108) * (-4968.204) (-4974.892) (-4976.488) [-4969.630] -- 0:05:32
844000 -- (-4980.205) (-4989.037) (-4968.012) [-4963.497] * (-4977.505) (-4981.009) [-4983.359] (-4982.351) -- 0:05:29
845000 -- (-4998.771) (-4977.200) (-5004.010) [-4967.148] * [-4975.828] (-4992.524) (-4988.925) (-4984.611) -- 0:05:27
Average standard deviation of split frequencies: 0.007340
846000 -- (-4978.853) [-4973.990] (-4983.761) (-4974.713) * [-4970.363] (-4990.777) (-4985.813) (-4975.058) -- 0:05:25
847000 -- (-4997.901) (-4988.283) [-4963.987] (-4979.317) * (-4963.496) (-4991.007) (-4969.447) [-4973.392] -- 0:05:23
848000 -- [-4976.281] (-4987.441) (-4981.507) (-4975.607) * (-4975.839) [-4973.687] (-4984.185) (-4978.781) -- 0:05:21
849000 -- (-4996.555) (-4981.751) [-4953.480] (-4961.206) * (-4980.071) (-4989.027) (-4982.577) [-4973.262] -- 0:05:19
850000 -- (-4974.066) (-4982.656) [-4970.323] (-4989.613) * [-4974.021] (-4981.192) (-4995.570) (-4982.058) -- 0:05:17
Average standard deviation of split frequencies: 0.007204
851000 -- [-4990.751] (-4979.070) (-4989.423) (-4974.592) * [-4970.224] (-4989.499) (-4978.746) (-4974.948) -- 0:05:15
852000 -- (-4988.204) (-4983.158) [-4972.911] (-4968.111) * [-4973.999] (-4973.835) (-4987.685) (-4965.848) -- 0:05:13
853000 -- (-4978.307) (-4972.105) (-4975.560) [-4964.037] * (-4974.467) [-4968.212] (-4996.625) (-4977.921) -- 0:05:11
854000 -- [-4980.149] (-4985.805) (-4982.168) (-4978.811) * (-4975.536) [-4961.374] (-4978.891) (-4982.887) -- 0:05:08
855000 -- (-4992.493) [-4965.001] (-4993.992) (-4962.064) * (-4988.097) (-4969.092) (-4976.163) [-4978.324] -- 0:05:06
Average standard deviation of split frequencies: 0.006922
856000 -- (-4996.984) (-4971.231) (-4988.248) [-4960.143] * (-4972.621) [-4965.342] (-4981.974) (-4991.306) -- 0:05:04
857000 -- (-4988.487) (-4966.875) [-4979.422] (-4984.557) * (-4987.567) [-4961.829] (-4968.686) (-4987.937) -- 0:05:02
858000 -- (-4991.942) [-4965.797] (-4975.032) (-4966.517) * [-4968.897] (-4961.484) (-4975.575) (-4999.493) -- 0:05:00
859000 -- (-5013.995) (-4980.115) [-4968.403] (-4965.926) * (-4987.782) [-4972.802] (-4974.678) (-4975.271) -- 0:04:58
860000 -- (-4982.871) (-4976.456) (-4969.908) [-4978.251] * (-4991.896) [-4983.325] (-4979.644) (-4975.350) -- 0:04:56
Average standard deviation of split frequencies: 0.006798
861000 -- (-4973.752) (-4973.031) [-4979.447] (-4969.551) * (-4978.131) [-4973.300] (-4977.320) (-4983.644) -- 0:04:53
862000 -- [-4971.251] (-4973.680) (-4991.414) (-4975.471) * (-4989.037) (-4975.162) [-4967.112] (-4978.078) -- 0:04:51
863000 -- (-4963.555) (-4989.432) [-4966.082] (-4984.142) * (-4977.413) (-4978.372) (-4995.521) [-4981.572] -- 0:04:49
864000 -- (-4962.233) (-4996.962) (-4982.841) [-4978.359] * [-4972.227] (-4977.598) (-4978.797) (-4982.271) -- 0:04:47
865000 -- (-5002.092) [-4968.124] (-4987.388) (-4972.671) * [-4962.276] (-4970.125) (-4985.080) (-4968.887) -- 0:04:45
Average standard deviation of split frequencies: 0.006532
866000 -- (-4999.128) (-4971.376) (-4994.939) [-4975.486] * [-4981.593] (-4996.484) (-4987.586) (-4988.264) -- 0:04:43
867000 -- (-5010.589) (-4979.543) [-4973.501] (-4965.758) * (-4983.363) (-4988.239) [-4961.845] (-4978.941) -- 0:04:41
868000 -- (-4980.012) (-4971.758) (-4996.180) [-4976.932] * (-4970.915) (-4976.158) [-4963.089] (-4980.389) -- 0:04:39
869000 -- (-4986.275) (-5007.747) (-5003.098) [-4961.974] * (-4980.316) [-4976.489] (-4988.094) (-4980.065) -- 0:04:37
870000 -- (-4968.006) (-4983.683) [-4972.382] (-4967.036) * [-4964.864] (-4986.494) (-4966.138) (-4993.131) -- 0:04:35
Average standard deviation of split frequencies: 0.006310
871000 -- [-4970.090] (-4977.195) (-4966.761) (-4991.227) * (-4977.263) (-4994.695) [-4981.596] (-4977.280) -- 0:04:32
872000 -- (-4977.972) (-4971.230) [-4975.820] (-4999.096) * (-4977.435) [-4988.609] (-4995.169) (-4984.088) -- 0:04:30
873000 -- (-4982.404) [-4973.755] (-4968.519) (-4988.181) * (-4995.793) (-4986.569) (-4982.376) [-4976.563] -- 0:04:28
874000 -- (-4977.961) [-4979.659] (-4959.186) (-5006.904) * (-4982.944) (-4975.769) (-4974.718) [-4975.370] -- 0:04:26
875000 -- (-4975.769) (-4983.000) [-4980.443] (-4982.327) * (-4970.390) (-4982.388) [-4969.091] (-4984.043) -- 0:04:24
Average standard deviation of split frequencies: 0.006271
876000 -- (-4964.081) (-4978.207) [-4977.792] (-4971.018) * (-4973.859) (-4997.766) [-4965.736] (-4986.461) -- 0:04:22
877000 -- (-4984.890) (-4968.607) (-4985.700) [-4962.743] * (-4984.965) (-5005.276) (-4973.935) [-4992.700] -- 0:04:20
878000 -- [-4973.887] (-4974.339) (-4977.980) (-4978.623) * [-4970.827] (-4996.348) (-4972.361) (-4979.485) -- 0:04:18
879000 -- (-4982.240) (-4969.009) [-4962.487] (-4989.502) * [-4972.014] (-4992.050) (-4978.616) (-4974.193) -- 0:04:16
880000 -- (-4969.967) (-4980.387) [-4978.397] (-4994.638) * [-4977.066] (-4990.207) (-4977.268) (-4969.241) -- 0:04:13
Average standard deviation of split frequencies: 0.006043
881000 -- [-4967.745] (-4988.416) (-4977.065) (-4962.918) * (-4987.993) (-4990.188) (-4986.922) [-4973.182] -- 0:04:11
882000 -- (-4981.519) (-4985.469) (-4983.167) [-4963.479] * [-4976.807] (-4979.059) (-4982.011) (-5000.987) -- 0:04:09
883000 -- [-4966.066] (-4991.401) (-4979.673) (-4982.723) * (-4999.263) [-4972.786] (-4980.532) (-4994.729) -- 0:04:07
884000 -- [-4976.065] (-4972.511) (-4985.326) (-4994.495) * (-4972.834) (-5012.192) (-4978.532) [-4979.827] -- 0:04:05
885000 -- (-4981.348) (-4998.232) [-4960.161] (-4979.091) * (-4968.302) (-5002.310) [-4973.530] (-4980.521) -- 0:04:03
Average standard deviation of split frequencies: 0.006023
886000 -- (-4977.178) (-4988.312) [-4982.193] (-4975.202) * [-4976.135] (-4993.645) (-4985.073) (-4979.504) -- 0:04:01
887000 -- (-4993.297) (-4992.188) [-4978.164] (-4972.071) * [-4972.798] (-4985.885) (-4978.834) (-4985.113) -- 0:03:59
888000 -- (-4975.948) [-4971.407] (-4985.186) (-4966.046) * (-4983.846) [-4978.038] (-4991.346) (-4983.098) -- 0:03:56
889000 -- (-4995.548) (-4984.330) [-4973.767] (-4983.712) * (-4993.228) (-4972.454) (-4985.547) [-4970.164] -- 0:03:54
890000 -- (-4983.527) (-4984.236) [-4984.416] (-4998.577) * (-4976.117) (-4983.405) [-4958.494] (-4988.983) -- 0:03:52
Average standard deviation of split frequencies: 0.006260
891000 -- (-4984.465) (-4976.042) (-4996.749) [-4979.662] * (-4982.321) (-4986.823) [-4967.476] (-4972.861) -- 0:03:50
892000 -- (-4993.825) (-4979.865) (-4977.527) [-4963.667] * [-4976.314] (-4981.288) (-4970.939) (-4970.123) -- 0:03:48
893000 -- [-4979.037] (-4977.439) (-4984.319) (-4983.394) * [-4972.171] (-4974.732) (-4975.649) (-4984.700) -- 0:03:46
894000 -- (-4970.631) (-4999.507) (-4975.004) [-4971.343] * [-4977.720] (-4985.577) (-4994.871) (-4969.658) -- 0:03:44
895000 -- (-4980.007) (-4989.410) (-4986.812) [-4965.789] * (-4977.041) [-4974.336] (-4995.475) (-4992.073) -- 0:03:42
Average standard deviation of split frequencies: 0.006056
896000 -- (-5004.732) (-4986.648) [-4970.293] (-4981.433) * (-4993.212) [-4967.255] (-4975.226) (-4973.450) -- 0:03:40
897000 -- (-5019.891) (-4976.962) [-4965.968] (-4972.137) * (-4986.252) [-4974.930] (-4985.039) (-4975.688) -- 0:03:37
898000 -- (-4988.858) [-4974.590] (-4985.981) (-4977.241) * [-4968.751] (-4981.266) (-4995.096) (-4981.677) -- 0:03:35
899000 -- (-4980.202) (-4980.786) (-4977.138) [-4972.753] * [-4971.413] (-4986.310) (-5005.148) (-4983.595) -- 0:03:33
900000 -- (-4988.553) (-4981.650) [-4961.479] (-4987.743) * (-4989.637) (-4974.698) [-4972.748] (-4981.506) -- 0:03:31
Average standard deviation of split frequencies: 0.006271
901000 -- (-4983.267) (-4975.207) [-4981.851] (-4985.720) * (-4975.295) (-4971.662) (-4979.588) [-4977.318] -- 0:03:29
902000 -- (-4990.779) [-4985.463] (-4967.998) (-4988.425) * (-4975.170) (-4988.324) [-4973.500] (-4975.582) -- 0:03:27
903000 -- (-4986.118) (-4972.000) (-4989.972) [-4976.184] * (-4982.658) (-4974.505) (-4990.019) [-4972.504] -- 0:03:25
904000 -- [-4976.064] (-4983.338) (-4975.019) (-4980.338) * (-4991.996) [-4964.337] (-4976.239) (-4979.630) -- 0:03:23
905000 -- (-4969.927) (-4995.502) [-4973.979] (-4988.053) * (-4984.950) [-4981.605] (-4972.744) (-4982.717) -- 0:03:21
Average standard deviation of split frequencies: 0.006374
906000 -- (-4969.054) (-4985.539) (-4970.198) [-4978.582] * (-4975.481) (-4978.310) (-4975.281) [-4977.404] -- 0:03:18
907000 -- (-4966.231) (-4965.907) [-4977.085] (-4985.655) * (-4974.578) [-4968.541] (-4981.210) (-4970.657) -- 0:03:16
908000 -- [-4960.897] (-4977.147) (-4982.830) (-4981.541) * (-4979.919) (-4976.118) (-4976.207) [-4971.193] -- 0:03:14
909000 -- [-4971.689] (-4972.737) (-5010.707) (-4992.115) * (-4976.440) (-4990.236) (-4975.672) [-4963.585] -- 0:03:12
910000 -- [-4978.230] (-4970.357) (-4992.833) (-5003.517) * (-4976.919) (-4984.937) [-4979.202] (-4999.054) -- 0:03:10
Average standard deviation of split frequencies: 0.006131
911000 -- (-4971.347) [-4981.785] (-4971.795) (-4980.464) * (-4988.633) (-4979.924) (-4979.896) [-4970.549] -- 0:03:08
912000 -- (-4971.052) (-4988.512) [-4974.212] (-4991.790) * (-4991.934) (-4977.669) [-4972.728] (-4969.065) -- 0:03:06
913000 -- (-4973.799) (-4972.680) [-4974.539] (-4983.358) * (-4979.576) (-4978.204) (-4988.718) [-4958.858] -- 0:03:04
914000 -- (-4987.486) (-4989.820) (-4988.543) [-4965.768] * (-4982.967) [-4975.045] (-4974.949) (-4990.588) -- 0:03:01
915000 -- (-4995.382) [-4969.473] (-4995.766) (-4971.465) * (-4961.657) (-4969.590) [-4980.730] (-4994.968) -- 0:02:59
Average standard deviation of split frequencies: 0.006205
916000 -- (-5005.931) (-4966.078) [-4978.316] (-4974.585) * (-4976.341) [-4970.780] (-4991.376) (-4978.004) -- 0:02:57
917000 -- (-4989.653) [-4970.231] (-4988.585) (-4977.262) * (-4987.380) (-4974.552) (-4990.045) [-4975.640] -- 0:02:55
918000 -- (-4966.299) (-4980.212) (-4975.684) [-4964.365] * (-4980.226) [-4975.768] (-4985.119) (-4997.269) -- 0:02:53
919000 -- (-4971.372) [-4971.763] (-4990.460) (-4967.489) * (-4973.072) [-4963.559] (-4982.486) (-5009.410) -- 0:02:51
920000 -- (-4995.483) (-4975.591) (-4970.352) [-4966.536] * [-4974.635] (-4988.855) (-4975.892) (-4979.816) -- 0:02:49
Average standard deviation of split frequencies: 0.006566
921000 -- (-4983.452) [-4963.925] (-4995.371) (-4966.110) * (-4978.765) [-4976.070] (-4974.093) (-4969.113) -- 0:02:47
922000 -- (-4979.124) (-4970.454) (-4977.230) [-4976.847] * (-4973.500) [-4971.193] (-4968.657) (-4985.433) -- 0:02:45
923000 -- (-4974.320) [-4978.468] (-4980.185) (-4982.740) * (-4984.860) (-4966.280) (-4960.691) [-4958.282] -- 0:02:42
924000 -- (-5010.952) (-4984.341) [-4984.815] (-4978.013) * (-4974.891) (-4988.438) (-4979.563) [-4970.184] -- 0:02:40
925000 -- (-4993.632) [-4970.083] (-4977.281) (-4983.271) * (-4994.939) [-4980.470] (-4972.542) (-4975.801) -- 0:02:38
Average standard deviation of split frequencies: 0.006435
926000 -- (-4982.740) [-4971.910] (-4987.728) (-4972.012) * (-4974.980) [-4974.289] (-4986.955) (-4987.122) -- 0:02:36
927000 -- (-5000.221) [-4973.628] (-4974.831) (-4983.148) * (-4972.780) [-4966.818] (-4972.858) (-4975.571) -- 0:02:34
928000 -- (-4989.389) (-4987.289) (-4993.800) [-4970.473] * [-4979.522] (-4973.328) (-4997.115) (-4979.493) -- 0:02:32
929000 -- (-4988.206) (-4976.850) [-4970.261] (-4987.287) * (-4993.265) [-4975.414] (-4989.442) (-4980.286) -- 0:02:30
930000 -- (-4986.148) (-4970.623) [-4957.271] (-4976.548) * (-4983.006) (-4978.028) [-4976.720] (-4995.239) -- 0:02:28
Average standard deviation of split frequencies: 0.006461
931000 -- (-4983.041) (-4970.267) [-4980.003] (-5009.882) * (-4974.374) (-4978.595) [-4970.409] (-4990.417) -- 0:02:26
932000 -- (-4981.875) (-4980.010) [-4975.509] (-4968.754) * (-4969.082) (-4968.773) [-4964.836] (-4987.118) -- 0:02:23
933000 -- (-4983.277) (-5000.404) (-4981.254) [-4980.482] * (-4992.190) (-4979.952) [-4980.321] (-4977.719) -- 0:02:21
934000 -- (-4974.545) (-4979.218) [-4982.683] (-4975.257) * [-4981.446] (-4988.147) (-4976.016) (-4975.566) -- 0:02:19
935000 -- [-4967.334] (-4965.876) (-4999.472) (-4980.967) * (-4976.548) (-4978.411) (-4992.806) [-4975.846] -- 0:02:17
Average standard deviation of split frequencies: 0.006386
936000 -- (-4970.491) [-4972.143] (-4982.313) (-4979.206) * [-4983.913] (-4964.723) (-4994.858) (-4989.782) -- 0:02:15
937000 -- (-4984.495) (-4978.260) (-4984.197) [-4987.273] * (-5008.208) [-4970.149] (-4983.494) (-4969.688) -- 0:02:13
938000 -- [-4964.523] (-4974.308) (-4984.978) (-4975.817) * (-4977.367) [-4968.809] (-4965.897) (-4989.930) -- 0:02:11
939000 -- (-4988.538) (-4983.494) (-4986.950) [-4976.467] * (-4982.762) (-4987.325) [-4974.919] (-4968.472) -- 0:02:09
940000 -- (-4985.639) [-4969.750] (-4973.001) (-4988.788) * (-4979.893) (-4972.426) [-4967.797] (-5001.802) -- 0:02:06
Average standard deviation of split frequencies: 0.006332
941000 -- (-4981.722) (-4979.320) [-4971.133] (-4991.706) * [-4974.046] (-4983.978) (-4983.561) (-4967.851) -- 0:02:04
942000 -- (-4975.457) (-4985.344) [-4973.095] (-4975.170) * (-4975.205) [-4974.939] (-4975.405) (-4989.899) -- 0:02:02
943000 -- [-4973.334] (-4973.044) (-4976.223) (-4969.234) * (-4976.087) [-4969.503] (-4997.260) (-4962.924) -- 0:02:00
944000 -- [-4974.831] (-4980.101) (-4977.422) (-4976.460) * [-4969.831] (-4984.959) (-5003.688) (-4997.548) -- 0:01:58
945000 -- (-4986.140) (-4971.829) [-4966.484] (-4975.916) * (-4978.701) (-4971.203) (-4983.952) [-4973.037] -- 0:01:56
Average standard deviation of split frequencies: 0.006271
946000 -- (-4986.815) (-4978.996) [-4967.186] (-4980.653) * (-4975.222) [-4967.198] (-4999.172) (-5009.545) -- 0:01:54
947000 -- [-4977.808] (-4984.782) (-4974.631) (-4972.601) * [-4963.365] (-4979.683) (-4974.187) (-4982.784) -- 0:01:52
948000 -- (-4982.680) (-4977.611) (-4976.196) [-4988.963] * [-4965.762] (-4991.890) (-4969.209) (-4984.280) -- 0:01:50
949000 -- (-4971.948) [-4967.788] (-4983.813) (-5001.706) * [-4979.960] (-4975.987) (-4996.748) (-4985.870) -- 0:01:47
950000 -- [-4982.429] (-4972.415) (-4979.779) (-4972.954) * (-4979.940) (-4977.066) (-4971.818) [-4978.736] -- 0:01:45
Average standard deviation of split frequencies: 0.006093
951000 -- [-4971.898] (-4986.546) (-4974.422) (-4979.389) * (-4973.579) (-4977.538) [-4974.757] (-4976.887) -- 0:01:43
952000 -- (-4981.153) (-4979.461) (-4973.080) [-4979.335] * (-4982.956) (-4991.111) [-4974.945] (-4982.070) -- 0:01:41
953000 -- (-4985.569) (-4991.993) (-4986.938) [-4981.259] * (-5000.502) (-4982.911) (-4974.958) [-4977.549] -- 0:01:39
954000 -- [-4977.097] (-4979.927) (-4992.917) (-4972.617) * (-4975.919) (-4998.118) (-4979.320) [-4971.096] -- 0:01:37
955000 -- (-4981.064) [-4975.347] (-4980.964) (-4960.362) * (-4986.450) (-4982.785) (-4999.497) [-4982.463] -- 0:01:35
Average standard deviation of split frequencies: 0.005908
956000 -- (-4980.035) (-4982.176) (-4985.042) [-4966.519] * (-4997.485) [-4962.670] (-4979.937) (-4975.988) -- 0:01:33
957000 -- (-4980.280) (-4994.865) (-5005.633) [-4970.173] * (-4984.437) (-4985.164) (-5001.525) [-4970.761] -- 0:01:30
958000 -- (-4982.032) [-4986.814] (-4991.496) (-4973.747) * (-4958.938) (-4977.924) (-4984.649) [-4971.523] -- 0:01:28
959000 -- [-4959.435] (-4984.922) (-4976.820) (-4988.901) * [-4970.616] (-4984.593) (-4988.050) (-4974.545) -- 0:01:26
960000 -- (-4981.256) (-4975.147) (-4984.428) [-4962.903] * (-4971.689) (-4980.550) [-4975.313] (-4975.710) -- 0:01:24
Average standard deviation of split frequencies: 0.005785
961000 -- [-4977.240] (-4988.985) (-4990.209) (-4981.934) * (-4983.233) (-4974.934) [-4976.512] (-4980.868) -- 0:01:22
962000 -- (-4986.715) (-4980.074) (-4981.834) [-4969.789] * (-4987.552) (-4983.607) [-4968.488] (-4998.345) -- 0:01:20
963000 -- (-4980.746) (-4990.102) [-4977.874] (-4988.392) * [-4963.647] (-4985.086) (-4985.279) (-4976.186) -- 0:01:18
964000 -- [-4979.329] (-4982.692) (-4997.698) (-4986.034) * [-4960.475] (-4976.289) (-4983.437) (-4976.947) -- 0:01:16
965000 -- [-4980.322] (-4982.824) (-4984.910) (-4988.390) * (-4972.057) [-4979.521] (-4986.781) (-4972.344) -- 0:01:14
Average standard deviation of split frequencies: 0.005838
966000 -- (-4972.097) (-4999.066) [-4980.650] (-4994.089) * [-4979.389] (-4968.094) (-4974.558) (-5002.551) -- 0:01:11
967000 -- [-4976.314] (-4976.769) (-4988.143) (-4982.036) * (-4971.925) (-4986.223) [-4978.066] (-4983.667) -- 0:01:09
968000 -- (-4977.365) (-4967.956) (-4980.596) [-4967.593] * (-4992.849) [-4959.570] (-4992.095) (-4971.677) -- 0:01:07
969000 -- (-4968.968) (-4969.895) (-5004.946) [-4975.631] * [-4986.723] (-4997.822) (-4982.729) (-4983.409) -- 0:01:05
970000 -- (-4978.702) (-4978.177) (-4986.337) [-4973.834] * [-4982.117] (-5000.513) (-4973.859) (-4985.514) -- 0:01:03
Average standard deviation of split frequencies: 0.006029
971000 -- (-4984.510) (-4976.270) (-4970.521) [-4970.243] * (-4989.373) [-4980.435] (-4976.802) (-4996.528) -- 0:01:01
972000 -- [-4960.562] (-4987.518) (-4980.949) (-4965.408) * (-4982.815) (-4991.799) [-4981.360] (-4969.387) -- 0:00:59
973000 -- (-4973.492) [-4990.805] (-5001.051) (-4964.160) * (-4983.649) (-4979.217) (-4980.692) [-4967.449] -- 0:00:57
974000 -- (-4978.584) [-4968.156] (-4979.214) (-4979.660) * (-4978.082) (-4998.957) (-5003.876) [-4982.244] -- 0:00:55
975000 -- (-4970.479) (-4979.771) [-4995.658] (-4976.733) * (-4977.043) (-4997.332) (-4986.030) [-4974.011] -- 0:00:52
Average standard deviation of split frequencies: 0.006069
976000 -- (-4983.759) (-4966.804) (-4985.246) [-4968.491] * (-4969.884) (-4978.442) (-5011.078) [-4964.968] -- 0:00:50
977000 -- (-4989.003) (-4977.767) (-4998.257) [-4972.381] * (-4991.195) (-4994.461) (-4976.844) [-4974.232] -- 0:00:48
978000 -- (-4992.002) (-4970.214) [-4967.253] (-4977.243) * (-4981.633) (-4995.924) (-4983.802) [-4985.468] -- 0:00:46
979000 -- (-4988.874) [-4983.692] (-4968.337) (-4998.875) * (-4975.497) (-4965.628) (-4973.454) [-4972.749] -- 0:00:44
980000 -- (-4978.212) (-4974.256) (-4990.202) [-4971.306] * (-4992.919) [-4966.402] (-4980.032) (-5006.414) -- 0:00:42
Average standard deviation of split frequencies: 0.005868
981000 -- (-4980.905) (-4980.811) [-4974.944] (-4974.306) * (-4992.871) (-4976.046) [-4979.378] (-4991.921) -- 0:00:40
982000 -- (-4981.429) (-4996.593) [-4969.573] (-4968.516) * (-4992.176) (-4984.243) [-4965.149] (-4979.760) -- 0:00:38
983000 -- (-4974.620) (-4986.056) [-4975.015] (-4974.304) * (-4970.856) (-4989.200) [-4960.679] (-4990.085) -- 0:00:35
984000 -- (-4971.578) [-4963.521] (-4984.777) (-4994.589) * [-4973.445] (-5002.609) (-4975.542) (-4987.406) -- 0:00:33
985000 -- (-4974.300) [-4968.086] (-4976.128) (-4979.418) * (-4980.205) (-4980.962) (-4976.381) [-4980.418] -- 0:00:31
Average standard deviation of split frequencies: 0.005719
986000 -- (-4976.786) [-4963.194] (-4990.054) (-4988.088) * (-4980.768) (-4979.206) (-4960.695) [-4966.162] -- 0:00:29
987000 -- (-4978.756) (-4984.216) (-4986.023) [-4976.436] * (-4974.640) (-4982.525) (-4971.059) [-4980.554] -- 0:00:27
988000 -- [-4974.219] (-4989.816) (-4983.940) (-4974.700) * (-4975.957) [-4972.784] (-4985.536) (-4998.850) -- 0:00:25
989000 -- (-4982.288) (-5000.703) (-4972.718) [-4973.242] * (-4977.661) [-4972.993] (-4985.602) (-4978.762) -- 0:00:23
990000 -- (-4982.273) (-4967.366) (-4977.098) [-4979.051] * [-4992.475] (-4968.129) (-4990.966) (-4990.406) -- 0:00:21
Average standard deviation of split frequencies: 0.005665
991000 -- (-4972.174) [-4975.448] (-4987.210) (-4978.101) * (-4978.897) (-4995.067) [-4971.593] (-4977.963) -- 0:00:19
992000 -- (-4975.332) [-4988.245] (-4978.157) (-4982.461) * [-4972.202] (-4978.077) (-4967.894) (-4992.221) -- 0:00:16
993000 -- (-4985.557) [-4974.451] (-4984.724) (-4998.313) * (-4990.889) (-4983.903) [-4978.704] (-4979.517) -- 0:00:14
994000 -- (-4985.364) (-4979.279) [-4961.946] (-4992.119) * (-4983.704) (-4995.370) [-4980.454] (-4979.244) -- 0:00:12
995000 -- (-4974.820) [-4976.205] (-4982.362) (-4991.597) * (-4988.614) [-4977.316] (-4981.000) (-4955.866) -- 0:00:10
Average standard deviation of split frequencies: 0.005456
996000 -- [-4974.162] (-4969.916) (-4967.297) (-4973.417) * (-4980.780) (-4974.090) (-4981.732) [-4975.661] -- 0:00:08
997000 -- (-4986.514) (-4975.584) [-4971.097] (-4977.330) * (-4985.500) (-4971.712) (-4993.863) [-4984.155] -- 0:00:06
998000 -- [-4975.676] (-4996.414) (-4974.782) (-4978.149) * (-4972.005) (-4985.927) [-4970.467] (-4976.104) -- 0:00:04
999000 -- (-4977.130) (-4978.847) (-4973.456) [-4963.781] * (-5003.193) (-4975.271) [-4983.294] (-4969.962) -- 0:00:02
1000000 -- [-4967.066] (-4982.487) (-4972.366) (-4972.595) * (-4970.340) (-4989.051) (-4987.296) [-4974.948] -- 0:00:00
Average standard deviation of split frequencies: 0.005431
Analysis completed in 35 mins 17 seconds
Analysis used 2114.34 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -4945.44
Likelihood of best state for "cold" chain of run 2 was -4945.95
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
30.9 % ( 29 %) Dirichlet(Revmat{all})
50.7 % ( 31 %) Slider(Revmat{all})
20.9 % ( 16 %) Dirichlet(Pi{all})
25.7 % ( 26 %) Slider(Pi{all})
27.5 % ( 25 %) Multiplier(Alpha{1,2})
45.6 % ( 24 %) Multiplier(Alpha{3})
56.9 % ( 41 %) Slider(Pinvar{all})
16.1 % ( 23 %) ExtSPR(Tau{all},V{all})
14.6 % ( 12 %) ExtTBR(Tau{all},V{all})
25.8 % ( 30 %) NNI(Tau{all},V{all})
15.8 % ( 13 %) ParsSPR(Tau{all},V{all})
26.9 % ( 27 %) Multiplier(V{all})
48.8 % ( 49 %) Nodeslider(V{all})
24.6 % ( 26 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
31.2 % ( 19 %) Dirichlet(Revmat{all})
50.3 % ( 29 %) Slider(Revmat{all})
21.5 % ( 24 %) Dirichlet(Pi{all})
25.8 % ( 28 %) Slider(Pi{all})
27.5 % ( 28 %) Multiplier(Alpha{1,2})
45.6 % ( 31 %) Multiplier(Alpha{3})
56.2 % ( 35 %) Slider(Pinvar{all})
15.8 % ( 19 %) ExtSPR(Tau{all},V{all})
14.5 % ( 15 %) ExtTBR(Tau{all},V{all})
25.8 % ( 30 %) NNI(Tau{all},V{all})
16.3 % ( 19 %) ParsSPR(Tau{all},V{all})
26.7 % ( 29 %) Multiplier(V{all})
48.6 % ( 56 %) Nodeslider(V{all})
24.7 % ( 20 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.61 0.33 0.16
2 | 166691 0.64 0.37
3 | 165763 167079 0.67
4 | 167257 166558 166652
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.62 0.33 0.16
2 | 166630 0.64 0.36
3 | 166243 166827 0.66
4 | 166779 166550 166971
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -4968.00
| 2 1 |
| |
| 1 |
| 1 2 1 2 |
| 1 2 2 22 1 2 2 |
|1112 1 1 2 2 2 1 |
| 1 1 2 2 1 2 |
| 2 1 1 1 22 1 1 * 1 2 1 2 |
|2 1 22 2 1 2 1 2 12 1 2 12 * 1 * 1*2 |
| 2 2 112 2 2 1 21 2 2 2 1 1|
| 2 2 1 21 1 2 2 12 1 1 * |
| 2 1 1 1 2 2 1 12 2 1 |
| 2 2 1 2 |
| 1 1 11 2|
| 1 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -4976.69
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -4959.36 -4997.74
2 -4960.26 -4999.29
--------------------------------------
TOTAL -4959.71 -4998.78
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.237748 0.007609 1.067722 1.405298 1.234601 1181.77 1213.79 1.000
r(A<->C){all} 0.098765 0.000239 0.069355 0.129029 0.098609 787.21 867.40 1.000
r(A<->G){all} 0.206776 0.000463 0.163288 0.248103 0.206106 654.49 781.78 1.000
r(A<->T){all} 0.094843 0.000201 0.067337 0.123734 0.094107 1018.52 1064.95 1.001
r(C<->G){all} 0.039740 0.000186 0.014744 0.066225 0.038741 677.03 685.73 1.001
r(C<->T){all} 0.435846 0.000857 0.381881 0.493293 0.435728 656.81 743.46 1.000
r(G<->T){all} 0.124030 0.000278 0.090023 0.154877 0.123026 979.04 994.88 1.002
pi(A){all} 0.299898 0.000138 0.276670 0.322060 0.299787 698.26 912.95 1.002
pi(C){all} 0.214679 0.000107 0.194596 0.234738 0.214545 825.50 1019.52 1.000
pi(G){all} 0.218498 0.000115 0.198131 0.239909 0.218304 698.57 767.02 1.000
pi(T){all} 0.266925 0.000116 0.246911 0.287920 0.266755 1032.85 1107.24 1.001
alpha{1,2} 0.236074 0.000948 0.179795 0.297236 0.233122 990.08 1196.90 1.000
alpha{3} 3.639522 1.679862 1.596930 6.172227 3.397841 1283.37 1283.86 1.000
pinvar{all} 0.074871 0.002079 0.000070 0.155808 0.070390 1219.84 1264.10 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C11
3 -- C12
4 -- C14
5 -- C15
6 -- C17
7 -- C18
8 -- C19
9 -- C2
10 -- C20
11 -- C21
12 -- C22
13 -- C24
14 -- C25
15 -- C27
16 -- C29
17 -- C3
18 -- C31
19 -- C32
20 -- C33
21 -- C34
22 -- C36
23 -- C39
24 -- C4
25 -- C42
26 -- C5
27 -- C6
28 -- C7
29 -- C8
30 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------------------------
1 -- .*****************************
2 -- .*............................
3 -- ..*...........................
4 -- ...*..........................
5 -- ....*.........................
6 -- .....*........................
7 -- ......*.......................
8 -- .......*......................
9 -- ........*.....................
10 -- .........*....................
11 -- ..........*...................
12 -- ...........*..................
13 -- ............*.................
14 -- .............*................
15 -- ..............*...............
16 -- ...............*..............
17 -- ................*.............
18 -- .................*............
19 -- ..................*...........
20 -- ...................*..........
21 -- ....................*.........
22 -- .....................*........
23 -- ......................*.......
24 -- .......................*......
25 -- ........................*.....
26 -- .........................*....
27 -- ..........................*...
28 -- ...........................*..
29 -- ............................*.
30 -- .............................*
31 -- .*******.*..............*..*.*
32 -- .*********..............*..*.*
33 -- .*********..............******
34 -- ....***..*..............*.....
35 -- ............**........*.......
36 -- ...****..*..............*.....
37 -- ...............*..*...........
38 -- .**...........................
39 -- ....................**........
40 -- ...*****.*..............*.....
41 -- ............**................
42 -- ...........*.......*..........
43 -- ...*****.*..............*....*
44 -- ..............**.**...........
45 -- .....**.......................
46 -- .....**..*....................
47 -- .**********************.******
48 -- .*********..............*..***
49 -- .*******.*..............*....*
50 -- .*********.*....*..***..******
51 -- .**........................*..
52 -- ..............*****...........
53 -- ..............**..*...........
54 -- ....***..*....................
55 -- ...............*.**...........
56 -- ...........*.......***........
57 -- .....**..*..............*.....
58 -- ....*...................*.....
59 -- ..............*..*............
60 -- .........................**...
61 -- .*********..............**.***
62 -- ..........*************.......
63 -- ...........*....*..***........
64 -- .*********..............*.****
65 -- .*********.*.......***..******
66 -- ..........**************......
67 -- .*********.*..********..******
68 -- .*********.************.******
69 -- ..........*.**........*.......
70 -- .*********..........**..******
71 -- ................*...**........
72 -- .*********.*.......*....******
73 -- ...........*....*..*..........
74 -- ............****.**...*.......
75 -- .***********..********..******
76 -- ..........*.****.**...*.......
77 -- ..........*...**.**...........
78 -- .........................**.*.
79 -- .........................*..*.
80 -- ...........*..********........
81 -- .*********.***..*..****.******
82 -- ..........................*.*.
83 -- .*********..............**.*.*
------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 3002 1.000000 0.000000 1.000000 1.000000 2
33 3002 1.000000 0.000000 1.000000 1.000000 2
34 3002 1.000000 0.000000 1.000000 1.000000 2
35 3002 1.000000 0.000000 1.000000 1.000000 2
36 3002 1.000000 0.000000 1.000000 1.000000 2
37 3002 1.000000 0.000000 1.000000 1.000000 2
38 3002 1.000000 0.000000 1.000000 1.000000 2
39 3002 1.000000 0.000000 1.000000 1.000000 2
40 3002 1.000000 0.000000 1.000000 1.000000 2
41 3001 0.999667 0.000471 0.999334 1.000000 2
42 3000 0.999334 0.000000 0.999334 0.999334 2
43 2990 0.996003 0.000942 0.995336 0.996669 2
44 2952 0.983344 0.005653 0.979347 0.987342 2
45 2951 0.983011 0.000471 0.982678 0.983344 2
46 2857 0.951699 0.006124 0.947368 0.956029 2
47 2312 0.770153 0.000000 0.770153 0.770153 2
48 1853 0.617255 0.016488 0.605596 0.628914 2
49 1778 0.592272 0.002827 0.590273 0.594270 2
50 1311 0.436709 0.014604 0.426382 0.447035 2
51 1224 0.407728 0.002827 0.405730 0.409727 2
52 1089 0.362758 0.023083 0.346436 0.379081 2
53 1029 0.342771 0.000471 0.342438 0.343105 2
54 1011 0.336775 0.013662 0.327115 0.346436 2
55 993 0.330779 0.021199 0.315789 0.345769 2
56 986 0.328448 0.012248 0.319787 0.337109 2
57 985 0.328115 0.001413 0.327115 0.329114 2
58 977 0.325450 0.013662 0.315789 0.335110 2
59 957 0.318787 0.024968 0.301133 0.336442 2
60 836 0.278481 0.001884 0.277149 0.279813 2
61 823 0.274151 0.008951 0.267821 0.280480 2
62 823 0.274151 0.006124 0.269820 0.278481 2
63 769 0.256163 0.005182 0.252498 0.259827 2
64 745 0.248168 0.008009 0.242505 0.253831 2
65 704 0.234510 0.006595 0.229847 0.239174 2
66 651 0.216855 0.000471 0.216522 0.217189 2
67 593 0.197535 0.003298 0.195203 0.199867 2
68 586 0.195203 0.004711 0.191872 0.198534 2
69 568 0.189207 0.000000 0.189207 0.189207 2
70 462 0.153897 0.008480 0.147901 0.159893 2
71 454 0.151233 0.002827 0.149234 0.153231 2
72 433 0.144237 0.014604 0.133911 0.154564 2
73 421 0.140240 0.000471 0.139907 0.140573 2
74 398 0.132578 0.003769 0.129913 0.135243 2
75 383 0.127582 0.006124 0.123251 0.131912 2
76 338 0.112592 0.002827 0.110593 0.114590 2
77 314 0.104597 0.007537 0.099267 0.109927 2
78 306 0.101932 0.000000 0.101932 0.101932 2
79 299 0.099600 0.009893 0.092605 0.106596 2
80 297 0.098934 0.004240 0.095936 0.101932 2
81 297 0.098934 0.006124 0.094604 0.103264 2
82 295 0.098268 0.004240 0.095270 0.101266 2
83 290 0.096602 0.010364 0.089274 0.103931 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.002046 0.000003 0.000000 0.005191 0.001676 1.000 2
length{all}[2] 0.300670 0.001517 0.227459 0.377083 0.298309 1.000 2
length{all}[3] 0.358199 0.002065 0.275129 0.448960 0.355713 1.000 2
length{all}[4] 0.004118 0.000005 0.000320 0.008314 0.003723 1.001 2
length{all}[5] 0.001078 0.000001 0.000000 0.003276 0.000722 1.000 2
length{all}[6] 0.001113 0.000001 0.000001 0.003313 0.000760 1.000 2
length{all}[7] 0.001038 0.000001 0.000001 0.003094 0.000729 1.000 2
length{all}[8] 0.017433 0.000023 0.008777 0.026907 0.017134 1.000 2
length{all}[9] 0.005215 0.000008 0.000372 0.011054 0.004760 1.000 2
length{all}[10] 0.001124 0.000001 0.000000 0.003475 0.000755 1.000 2
length{all}[11] 0.004007 0.000004 0.000663 0.007990 0.003647 1.000 2
length{all}[12] 0.003146 0.000003 0.000184 0.006652 0.002803 1.000 2
length{all}[13] 0.001050 0.000001 0.000000 0.003072 0.000744 1.000 2
length{all}[14] 0.001081 0.000001 0.000000 0.003204 0.000770 1.001 2
length{all}[15] 0.001040 0.000001 0.000000 0.003239 0.000704 1.000 2
length{all}[16] 0.001048 0.000001 0.000000 0.003126 0.000729 1.000 2
length{all}[17] 0.004101 0.000005 0.000679 0.008497 0.003701 1.001 2
length{all}[18] 0.002151 0.000002 0.000073 0.005172 0.001770 1.000 2
length{all}[19] 0.001033 0.000001 0.000001 0.003073 0.000720 1.000 2
length{all}[20] 0.003216 0.000004 0.000300 0.006841 0.002832 1.001 2
length{all}[21] 0.003068 0.000003 0.000341 0.006479 0.002736 1.000 2
length{all}[22] 0.001015 0.000001 0.000000 0.003015 0.000704 1.000 2
length{all}[23] 0.002085 0.000002 0.000008 0.004824 0.001775 1.000 2
length{all}[24] 0.002102 0.000002 0.000001 0.005098 0.001740 1.000 2
length{all}[25] 0.003191 0.000003 0.000402 0.006805 0.002889 1.000 2
length{all}[26] 0.001034 0.000001 0.000000 0.003043 0.000720 1.000 2
length{all}[27] 0.002104 0.000002 0.000053 0.005275 0.001728 1.000 2
length{all}[28] 0.058362 0.000289 0.026337 0.088823 0.059712 1.000 2
length{all}[29] 0.002544 0.000003 0.000053 0.005845 0.002155 1.000 2
length{all}[30] 0.039212 0.000065 0.025269 0.056066 0.038760 1.000 2
length{all}[31] 0.073199 0.000134 0.052381 0.096561 0.072641 1.001 2
length{all}[32] 0.016867 0.000021 0.008507 0.025978 0.016567 1.000 2
length{all}[33] 0.008191 0.000009 0.003094 0.014237 0.007827 1.000 2
length{all}[34] 0.008933 0.000010 0.003212 0.015173 0.008606 1.000 2
length{all}[35] 0.005291 0.000006 0.001296 0.009905 0.004954 1.000 2
length{all}[36] 0.017519 0.000025 0.008481 0.027657 0.017042 1.001 2
length{all}[37] 0.003126 0.000003 0.000269 0.006636 0.002781 1.000 2
length{all}[38] 0.147684 0.000813 0.092402 0.203532 0.146096 1.000 2
length{all}[39] 0.003128 0.000003 0.000288 0.006818 0.002730 1.000 2
length{all}[40] 0.038694 0.000069 0.024087 0.056026 0.038118 1.000 2
length{all}[41] 0.003133 0.000003 0.000372 0.006612 0.002794 1.001 2
length{all}[42] 0.003134 0.000003 0.000231 0.006551 0.002779 1.000 2
length{all}[43] 0.028739 0.000175 0.007764 0.054724 0.027426 1.000 2
length{all}[44] 0.002893 0.000003 0.000191 0.006385 0.002555 1.000 2
length{all}[45] 0.002177 0.000003 0.000043 0.005220 0.001839 1.000 2
length{all}[46] 0.002152 0.000002 0.000049 0.005307 0.001792 1.000 2
length{all}[47] 0.003064 0.000003 0.000385 0.006703 0.002675 1.000 2
length{all}[48] 0.001980 0.000002 0.000004 0.004949 0.001601 1.000 2
length{all}[49] 0.027307 0.000074 0.010569 0.043684 0.026681 1.000 2
length{all}[50] 0.002071 0.000002 0.000046 0.005019 0.001718 1.000 2
length{all}[51] 0.032270 0.000112 0.012399 0.052544 0.031513 1.001 2
length{all}[52] 0.002139 0.000002 0.000041 0.004937 0.001785 1.001 2
length{all}[53] 0.001028 0.000001 0.000002 0.003202 0.000650 1.000 2
length{all}[54] 0.001146 0.000001 0.000003 0.003459 0.000739 0.999 2
length{all}[55] 0.001103 0.000001 0.000001 0.003272 0.000755 0.999 2
length{all}[56] 0.001359 0.000002 0.000002 0.004209 0.000980 0.999 2
length{all}[57] 0.001136 0.000001 0.000002 0.003400 0.000773 1.001 2
length{all}[58] 0.001136 0.000001 0.000001 0.003327 0.000801 1.001 2
length{all}[59] 0.001063 0.000001 0.000000 0.003193 0.000710 0.999 2
length{all}[60] 0.001050 0.000001 0.000002 0.003082 0.000779 1.005 2
length{all}[61] 0.001054 0.000001 0.000000 0.003031 0.000722 1.000 2
length{all}[62] 0.002757 0.000003 0.000095 0.005904 0.002464 0.999 2
length{all}[63] 0.001734 0.000002 0.000013 0.004639 0.001418 0.999 2
length{all}[64] 0.001097 0.000001 0.000002 0.003239 0.000783 0.999 2
length{all}[65] 0.001616 0.000002 0.000004 0.004395 0.001228 1.002 2
length{all}[66] 0.002387 0.000003 0.000207 0.005485 0.001995 0.999 2
length{all}[67] 0.001441 0.000002 0.000001 0.004224 0.001020 1.001 2
length{all}[68] 0.001439 0.000002 0.000002 0.004114 0.001050 1.000 2
length{all}[69] 0.001123 0.000001 0.000000 0.003239 0.000749 0.999 2
length{all}[70] 0.001041 0.000001 0.000002 0.003211 0.000668 1.004 2
length{all}[71] 0.000999 0.000001 0.000001 0.002908 0.000693 0.998 2
length{all}[72] 0.001016 0.000001 0.000003 0.002861 0.000724 1.001 2
length{all}[73] 0.001049 0.000001 0.000000 0.003015 0.000750 1.002 2
length{all}[74] 0.001122 0.000001 0.000002 0.003232 0.000793 1.003 2
length{all}[75] 0.001022 0.000001 0.000002 0.002890 0.000715 0.997 2
length{all}[76] 0.001204 0.000001 0.000004 0.003309 0.000807 0.997 2
length{all}[77] 0.001083 0.000001 0.000001 0.003340 0.000806 0.997 2
length{all}[78] 0.001112 0.000001 0.000006 0.003241 0.000668 1.000 2
length{all}[79] 0.000986 0.000001 0.000001 0.003202 0.000688 0.997 2
length{all}[80] 0.001394 0.000002 0.000005 0.003680 0.000999 1.001 2
length{all}[81] 0.001053 0.000001 0.000000 0.003064 0.000748 0.997 2
length{all}[82] 0.001128 0.000001 0.000003 0.003519 0.000733 0.997 2
length{all}[83] 0.001064 0.000001 0.000001 0.003587 0.000621 0.997 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.005431
Maximum standard deviation of split frequencies = 0.024968
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.005
Clade credibility values:
/---------------------------------------------------------------------- C1 (1)
|
|---------------------------------------------------------------------- C4 (24)
|
| /----- C11 (2)
| /---------------100--------------+
| | \----- C12 (3)
| |
| | /---------------------- C14 (4)
| | |
| | | /---------------- C15 (5)
| | /-100+ |
| /-59-+ | | | /----- C17 (6)
| | | | | | /--98-+
| | | | \-100-+ | \----- C18 (7)
| | | | |-95-+
| | | /-100+ | \----------- C20 (10)
| | | | | |
| /-100+ | | | \---------------- C42 (25)
| | | \-100-+ |
| | | | \--------------------------- C19 (8)
| | | |
+ /-100-+ | \-------------------------------- C9 (30)
| | | |
| | | \------------------------------------------- C7 (28)
| /-62-+ |
| | | \------------------------------------------------ C2 (9)
| | |
| | \------------------------------------------------------ C8 (29)
| /-100-+
| | |----------------------------------------------------------- C5 (26)
| | |
| | \----------------------------------------------------------- C6 (27)
| |
| |----------------------------------------------------------------- C21 (11)
| |
| | /----- C22 (12)
| |----------------------------100----------------------------+
| | \----- C33 (20)
| |
| | /----- C24 (13)
| | /-100-+
| | | \----- C25 (14)
\-77-+-------------------------100-------------------------+
| \----------- C39 (23)
|
| /----------- C27 (15)
| |
| | /----- C29 (16)
|--------------------------98-------------------------+-100-+
| | \----- C32 (19)
| |
| \----------- C31 (18)
|
|----------------------------------------------------------------- C3 (17)
|
| /----- C34 (21)
\----------------------------100----------------------------+
\----- C36 (22)
Phylogram (based on average branch lengths):
/ C1 (1)
|
| C4 (24)
|
| /---------------------------------- C11 (2)
| /----------------+
| | \---------------------------------------- C12 (3)
| |
| | / C14 (4)
| | |
| | |/ C15 (5)
| | /-+|
| /--+ | || C17 (6)
| | | | ||
| | | | \+ C18 (7)
| | | | |
| | | /---+ | C20 (10)
| | | | | |
| /-------+ | | | \ C42 (25)
| | | \---+ |
| | | | \-- C19 (8)
| | | |
+/-+ | \---- C9 (30)
|| | |
|| | \------- C7 (28)
|| |
|| \- C2 (9)
||
||- C8 (29)
|+
|| C5 (26)
||
|\ C6 (27)
|
|- C21 (11)
|
|/ C22 (12)
|+
|\ C33 (20)
|
|/ C24 (13)
||
|| C25 (14)
|+
|\ C39 (23)
|
|/ C27 (15)
||
|| C29 (16)
|+
|| C32 (19)
||
|\ C31 (18)
|
|- C3 (17)
|
|/ C34 (21)
\+
\ C36 (22)
|----------| 0.100 expected changes per site
Calculating tree probabilities...
Credible sets of trees (2927 trees sampled):
50 % credible set contains 1426 trees
90 % credible set contains 2627 trees
95 % credible set contains 2777 trees
99 % credible set contains 2897 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Fri Nov 04 00:59:59 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.22 sec, SCORE=1000, Nseq=43, Len=408
C1 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C2 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C3 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSDQPWKVIPRNLVPVNKKD
C4 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C5 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C6 MATVKWADASEPQRGRQSRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C7 MATVNWADESEQQRGRQGRIPYSVYSPLLVDSEQPWKVIPRNLVPINKKD
C8 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C9 MATVNWADASEPQRGRQSRIPYSLYSPLLVDNDQPWKVIPRNLVPTNKKD
C10 MATVNWADASEPQRGRQSRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C11 MATVNWADESEQPRGRQARIPYSLYRPLLVDSEQPWKVIPRNLVPTNKKD
C12 MASVNWADASEPQRGRSGRIPFSLYNPLLVENGQPWKVIPRDLVPTNKKE
C13 MATVSWADASEPRRGRSGRIPYSLYRPLLVDNDQPWKVIPRDLVPTNKGD
C14 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C15 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C16 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C17 MATVNWADFSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C18 MATVNWADFSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C19 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C20 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C21 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C22 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C23 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C24 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C25 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C26 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSDQPWKVIPRNLVPVNKKD
C27 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C28 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C29 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C30 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C31 MATVKWADAPEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C32 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C33 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C34 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C35 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C36 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C37 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C38 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C39 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C40 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKD
C41 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
C42 MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKD
C43 MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKD
**:*.*** .* ***..***:*:* ****:. ********:*** ** :
C1 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C2 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C3 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C4 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C5 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C6 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C7 KDKLIGYWNIQKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERI--E
C8 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C9 KSKLIGYWNIQKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERI--E
C10 KSKLIGYWNIQKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERI--E
C11 KSKLIGYWNVQKRFRTRKGQRVDLPPKLHFYYLGTGPHQDAKFRDRR--E
C12 KDKLIGYWNVQKRFRTKKGQRVDLPPKVHFYYLGTGPHKESKFRERI--D
C13 KDKFVGYWNMQKRFRTRKGKKIFLPPKLHFYYLGTGPYPDAKFRERIADA
C14 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C15 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C16 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C17 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C18 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C19 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C20 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C21 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C22 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C23 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C24 KNKLIGYWNVQRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C25 KNKLIGYWNVQRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C26 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C27 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C28 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C29 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C30 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C31 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C32 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C33 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C34 KNKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C35 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C36 KNKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C37 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C38 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C39 KNKLIGYWNVQRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C40 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
C41 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKAAKFRERV--E
C42 KSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERI--E
C43 KNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERV--E
*.*::****:*:****:**::: *.**:*********: :***:*
C1 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C2 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C3 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVADEPDSRAP
C4 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C5 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C6 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C7 GVVWVAVDGAKTEPTGYGVRRKNLNPEEPRFSQALPNGVTVVEEPDSRAP
C8 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C9 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQALPNGVTVVEEPDSRAP
C10 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQALPNGVTVVEEPDSRAP
C11 GVIWVAIDGAKTEPTGYGVRRRNADPEEPRFNQNLPSGVSIVEEPDSRGP
C12 GVVWVAVNGAKTEPTGYGVRRKNADPETPKFNQKLPNGLSIVEDPDSRAT
C13 NIVWVAMNGAKTAPTGYGVRKRNAEPQTPKFNQELPEGVTIVEDVDSRGP
C14 GVVWVAVDGAKTEPTGYGVRRKNLDPEEPRFSQSLPNGVTVVEEPDSRAP
C15 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C16 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C17 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C18 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C19 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C20 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAP
C21 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C22 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C23 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRVP
C24 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C25 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C26 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVADEPDSRAP
C27 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C28 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C29 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C30 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C31 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C32 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C33 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C34 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C35 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C36 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C37 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C38 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C39 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C40 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAP
C41 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
C42 GVVWVAVDGAKTEPTGYGVRRKNSDPEEPLFSQSLPNGVTVVEEPDSRAP
C43 GVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAP
.::***::**** *******::* :*: * *.* **.*:::.:: *** .
C1 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C2 SRSQSRSQSRGRGE-SKPQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C3 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C4 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C5 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C6 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C7 SRSQSRSQSRGRGE-SKPQSRNSSSDR-----NQKSSQDDILKAVAAALK
C8 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C9 SRSQSRSQSRGRGE-SKPQSRNSSSDR-----NQKSSQDDIMKAVAAALK
C10 SRSQSRSQSRGRGE-SKPQSRNSSSDR-----NQKSSQDDIMKAVAAALK
C11 SRSQSRSQSRGRGA-SKPQSRNTSTER-----SQGSNQEDLLKAVAAALK
C12 SRSQSRSQSRDRGKNSKPQSRSSSTER-----P--QSQDDIMKAVAAALK
C13 SRSQSRNRSS-----SRPQSRNASNERLPKSNSKQSNQDDIMAAVAAALE
C14 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C15 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C16 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C17 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C18 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C19 SRSQSKSQSRGRGE-F----RNSSS----------ASQDDIMKAVAAALK
C20 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C21 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C22 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C23 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C24 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C25 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C26 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C27 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C28 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C29 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C30 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C31 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C32 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C33 SRSQSRSQSR-------IQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C34 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C35 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C36 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C37 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C38 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C39 SRSQSRSQSRSRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C40 SRSQSRSQSRSRVE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C41 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
C42 SRSQSKSQSRGRGE-FKPQSRNSSS----------ASQDDIIKAVAAALK
C43 SRSQSRSQSRGRGE-SKSQSRNPSSDR-----NH-NSQDDIMKAVAAALK
*****:.:* *..*. .*:*:: ******:
C1 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C2 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQTSAKSLARSQSSETKE
C3 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C4 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C5 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C6 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C7 SLGFD-PQE--KAKKAAKKGTPKPSRNQSPVSSQTRAKSPARPQSSETKE
C8 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C9 SLGFEKPQE--KENKVAKKGTPKPSRNQSPAPSQTRAKSPARSQSSETKE
C10 SLGFEKPQE--KENKVAKKGTPKPSRNQSPAPSQTRAKSPARSQSSETKE
C11 SLGFEKPQE--KDQKKGRKSTPKPSRSQSPVANQSRSKSPARSASSD-KE
C12 SLGFEKPQE--PQQKK-KKATPKSSRSSSPAPVK------AQSSDAQSKE
C13 KLGFERPNDASQPQKKQNKGTPKPSRAQSPAP--SRSKSPGRLQNAEPKE
C14 SLGF----E--KEKEAVKKGTPKPSRNQSPASSQTRAKSPARPQNSETKE
C15 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQTRAKSPARPQNSETKE
C16 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKE
C17 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKE
C18 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKE
C19 SLGFDKPQE--KEKKAAKKVTPKPSRNQSPASSQTCAKSPARPQNSETKE
C20 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKE
C21 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C22 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C23 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C24 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C25 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C26 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C27 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C28 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C29 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETKE
C30 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETKE
C31 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C32 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETKE
C33 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C34 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C35 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C36 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C37 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C38 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C39 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C40 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
C41 SLGFDKPQE--KDKKSAKTGTPKPSRNQSPSSSQSAAKILARSQSSETKE
C42 SLGF----E--KEKEAAKKGTPKPSRNQSPASFQTRAKSPARPQNSETKE
C43 SLGFEKPQE--KDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKE
.*** : :: .. ***.** .** . .: .:: **
C1 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C2 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C3 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C4 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C5 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C6 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C7 QKHELQKPRWKRQPNSDVTSNVTQCFGPRDLDHNFGSADVVANGVKAKGY
C8 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C9 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C10 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C11 QKHEMQKPRWKRQPNSDKTSNVTQCFGPRDFEHNFGNPELLANGVKAKGY
C12 QKHELQKPRWKRQPNSDKSSNVTQCFGPRDLEHNFGSADVVANGVKAKGY
C13 KKKELEKPRWKRQPNDELPSSVMYCFGPRDLDHNFGSDATIQKGVKAPNY
C14 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C15 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C16 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C17 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C18 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C19 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLYHNFGSAGVVANGVKAKGY
C20 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C21 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C22 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C23 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C24 QKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C25 QKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C26 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C27 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C28 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C29 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C30 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C31 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C32 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C33 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C34 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C35 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C36 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C37 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C38 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C39 QKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C40 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C41 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
C42 QKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGY
C43 QKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGY
:*:*::*********.: .*.* ****** ****. : :**** .*
C1 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C2 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C3 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C4 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C5 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C6 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C7 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTFTTRVTVPKDHPHLGKFLE
C8 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C9 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C10 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C11 PQFAELVPSTAAMLFDSHIDTKEEGESVVLTYTTRVKVPKDHPNLGKFLD
C12 PQFAELVPSTAAVLFDSHIDSKEAGDSVLLTFTTRVKVPKDHPHLGKFLE
C13 PQFAELVPSTAALLFDSHIDTKELGDSVLITYTHKVKVPKEHPNLGKFLN
C14 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C15 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C16 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C17 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C18 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C19 PQFAELVPSTAAMLFDSHIDFNESGNNVVLIYTTRVTVPKDHPHLGKFLE
C20 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C21 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C22 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C23 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C24 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C25 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C26 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C27 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C28 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C29 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C30 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C31 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C32 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C33 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C34 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C35 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C36 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C37 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C38 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C39 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C40 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C41 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
C42 PQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLE
C43 PQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLE
************:****** :* *:.*:: :* :*.***:**:*****:
C1 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C2 ELNAFT-----REMQQHPL---LNPSALEFNPSQTSPATAEPVRDEVSIE
C3 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C4 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C5 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C6 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C7 EINAFTKPSQVREMQQHPL---LNPSAQEFNPSQTSPAPAEPVYDEVAIE
C8 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C9 ELNAFTKPSQVREMQQHPL---LNPSAQEFNPSQTSPATVEPVYDEVAIE
C10 ELNAFTKPSQVREMQQHPL---LNPSAQEFNPSQTSPATVEPVYDEVAIE
C11 QLNAFTKPSSVKETQSHP----MNPAAPEFSP--IVPSNPEPIYDAVAME
C12 EINAFTKPSQVKETQQHPL---LNPAAQDFTPS-TSSSTVEPVYDEVALE
C13 EVNAFTKPSQVLLTQQHPIVPTLNPVAPEFNPTSSQP-KPEPIY-EVPTE
C14 ELNAFTKPSQ-GDMQQHPL---LNPSAQEFNPSQTSPGTVEPVYDAVSIE
C15 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C16 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C17 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C18 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C19 ELNAFTKPSQ-GEMQQHPL---LNPSAQEFNSLQTLPGTVESVYDAVAIE
C20 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C21 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C22 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C23 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C24 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C25 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C26 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C27 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C28 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C29 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C30 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C31 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C32 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C33 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C34 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C35 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C36 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C37 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C38 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C39 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C40 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C41 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
C42 ELNAFTKPLQ-GDMQQHPL---LNPSAQEL---QTSPGTAEPVYDAVSIE
C43 ELNAFT-----REMQQQPL---LNPSALEFNPSQTSPATVEPVRDEVSIE
::**** *.:* :** * :: . *.: *. *
C1 TDIIDEVN
C2 TDIIDEVN
C3 TDIIDEVN
C4 TDIIDEVN
C5 TDIIDEVN
C6 TDIIDEVN
C7 TDIIDEVN
C8 TDIIDEVN
C9 TDIIDEVN
C10 TDIIDEVN
C11 TDIIDEVN
C12 TDIIDEVN
C13 IDIVDEVN
C14 TDIIDEVN
C15 TDIIDEVN
C16 TDIIDEVN
C17 TDIIDEVN
C18 TDIIDEVN
C19 TDIIDEVN
C20 TDIIDEVN
C21 TDIIDEVN
C22 TDIIDEVN
C23 TDIIDEVN
C24 TDIIDEVN
C25 TDIIDEVN
C26 TDIIDEVN
C27 TDIIDEVN
C28 TDIIDEVN
C29 TDIIDEVN
C30 TDIIDEVN
C31 TDIIDEVN
C32 TDIIDEVN
C33 TDIIDEVN
C34 TDIIDEVN
C35 TDIIDEVN
C36 TDIIDEVN
C37 TDIIDEVN
C38 TDIIDEVN
C39 TDIIDEVN
C40 TDIIDEVN
C41 TDIIDEVN
C42 TDIIDEVN
C43 TDIIDEVN
**:****
-- Starting log on Fri Nov 04 04:51:24 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E.result/original_alignment/codeml,229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C9 1224 sites
reading seq# 2 C21 1224 sites
reading seq# 3 C5 1224 sites
reading seq# 4 C1 1224 sites
reading seq# 5 C42 1224 sites
reading seq# 6 C29 1224 sites
reading seq# 7 C18 1224 sites
reading seq# 8 C31 1224 sites
reading seq# 9 C4 1224 sites
reading seq#10 C36 1224 sites
reading seq#11 C2 1224 sites
reading seq#12 C11 1224 sites
reading seq#13 C39 1224 sites
reading seq#14 C25 1224 sites
reading seq#15 C14 1224 sites
reading seq#16 C3 1224 sites
reading seq#17 C8 1224 sites
reading seq#18 C6 1224 sites
reading seq#19 C24 1224 sites
reading seq#20 C22 1224 sites
reading seq#21 C27 1224 sites
reading seq#22 C19 1224 sites
reading seq#23 C32 1224 sites
reading seq#24 C33 1224 sites
reading seq#25 C34 1224 sites
reading seq#26 C17 1224 sites
reading seq#27 C12 1224 sites
reading seq#28 C15 1224 sites
reading seq#29 C20 1224 sites
reading seq#30 C7 1224 sitesns = 30 ls = 1224
Reading sequences, sequential format..
Reading seq # 1: C9
Reading seq # 2: C21
Reading seq # 3: C5
Reading seq # 4: C1
Reading seq # 5: C42
Reading seq # 6: C29
Reading seq # 7: C18
Reading seq # 8: C31
Reading seq # 9: C4
Reading seq #10: C36
Reading seq #11: C2
Reading seq #12: C11
Reading seq #13: C39
Reading seq #14: C25
Reading seq #15: C14
Reading seq #16: C3
Reading seq #17: C8
Reading seq #18: C6
Reading seq #19: C24
Reading seq #20: C22
Reading seq #21: C27
Reading seq #22: C19
Reading seq #23: C32
Reading seq #24: C33
Reading seq #25: C34
Reading seq #26: C17
Reading seq #27: C12
Reading seq #28: C15
Reading seq #29: C20
Reading seq #30: C7
Sites with gaps or missing data are removed.
39 ambiguity characters in seq. 1
57 ambiguity characters in seq. 2
57 ambiguity characters in seq. 3
57 ambiguity characters in seq. 4
78 ambiguity characters in seq. 5
57 ambiguity characters in seq. 6
78 ambiguity characters in seq. 7
57 ambiguity characters in seq. 8
57 ambiguity characters in seq. 9
57 ambiguity characters in seq. 10
57 ambiguity characters in seq. 11
51 ambiguity characters in seq. 12
57 ambiguity characters in seq. 13
57 ambiguity characters in seq. 14
69 ambiguity characters in seq. 15
57 ambiguity characters in seq. 16
57 ambiguity characters in seq. 17
57 ambiguity characters in seq. 18
57 ambiguity characters in seq. 19
57 ambiguity characters in seq. 20
57 ambiguity characters in seq. 21
69 ambiguity characters in seq. 22
57 ambiguity characters in seq. 23
75 ambiguity characters in seq. 24
57 ambiguity characters in seq. 25
78 ambiguity characters in seq. 26
66 ambiguity characters in seq. 27
78 ambiguity characters in seq. 28
78 ambiguity characters in seq. 29
42 ambiguity characters in seq. 30
49 sites are removed. 98 99 161 162 163 164 165 166 167 168 169 170 176 177 178 179 180 181 182 183 184 185 205 206 207 208 210 211 217 235 236 237 238 239 240 248 357 358 359 360 361 369 370 371 372 381 382 383 384
Sequences read..
Counting site patterns.. 0:00
Compressing, 299 patterns at 359 / 359 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 299 patterns at 359 / 359 sites (100.0%), 0:00
Counting codons..
3480 bytes for distance
291824 bytes for conP
26312 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(4, 9, (((((((12, 27), (((15, (28, ((26, 7), 29), 5)), 22), 1)), 30), 11), 17), 3, 18), 2, (20, 24), ((19, 14), 13), (21, (6, 23), 8), 16, (25, 10))); MP score: 572
2918240 bytes for conP, adjusted
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
32
0.063720 0.085434 0.035385 0.095000 0.097365 0.024433 0.060307 0.067931 0.019082 0.093198 0.019281 0.054224 0.051169 0.013854 0.026452 0.059093 0.088832 0.066213 0.079124 0.061702 0.088533 0.022629 0.108168 0.109943 0.087882 0.024169 0.071694 0.058856 0.049256 0.096520 0.071668 0.088637 0.094344 0.079087 0.048173 0.013180 0.071788 0.015707 0.080986 0.065081 0.075121 0.030429 0.103172 0.018040 0.103189 0.086780 0.106376 0.082612 0.030236 0.300000 0.875890 0.512499
ntime & nrate & np: 49 2 52
Bounds (np=52):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 11.931208
np = 52
lnL0 = -6111.757805
Iterating by ming2
Initial: fx= 6111.757805
x= 0.06372 0.08543 0.03538 0.09500 0.09737 0.02443 0.06031 0.06793 0.01908 0.09320 0.01928 0.05422 0.05117 0.01385 0.02645 0.05909 0.08883 0.06621 0.07912 0.06170 0.08853 0.02263 0.10817 0.10994 0.08788 0.02417 0.07169 0.05886 0.04926 0.09652 0.07167 0.08864 0.09434 0.07909 0.04817 0.01318 0.07179 0.01571 0.08099 0.06508 0.07512 0.03043 0.10317 0.01804 0.10319 0.08678 0.10638 0.08261 0.03024 0.30000 0.87589 0.51250
1 h-m-p 0.0000 0.0000 8429.2932 ++ 5321.049997 m 0.0000 57 | 1/52
2 h-m-p 0.0000 0.0000 2198.0075 ++ 5291.054355 m 0.0000 112 | 2/52
3 h-m-p 0.0000 0.0000 24273.4274 ++ 5247.916557 m 0.0000 167 | 2/52
4 h-m-p 0.0000 0.0000 8589.0964 ++ 5243.685801 m 0.0000 222 | 3/52
5 h-m-p 0.0000 0.0000 26325.5068 ++ 5182.719439 m 0.0000 277 | 4/52
6 h-m-p 0.0000 0.0000 3426827.4764 ++ 5035.616357 m 0.0000 332 | 5/52
7 h-m-p 0.0000 0.0000 18602.9616 ++ 4953.728266 m 0.0000 387 | 6/52
8 h-m-p 0.0000 0.0000 94422.6271 ++ 4926.564069 m 0.0000 442 | 7/52
9 h-m-p 0.0000 0.0000 129424.6299 ++ 4896.272125 m 0.0000 497 | 8/52
10 h-m-p 0.0000 0.0000 23750.6424 ++ 4879.428783 m 0.0000 552 | 9/52
11 h-m-p 0.0000 0.0000 11689.2950 ++ 4861.311248 m 0.0000 607 | 10/52
12 h-m-p 0.0000 0.0000 7806.8456 ++ 4822.862155 m 0.0000 662 | 11/52
13 h-m-p 0.0000 0.0000 2688.2894 ++ 4822.304818 m 0.0000 717 | 12/52
14 h-m-p 0.0000 0.0000 2170.8623 ++ 4804.330073 m 0.0000 772 | 13/52
15 h-m-p 0.0000 0.0000 1461.0137 ++ 4773.951196 m 0.0000 827 | 14/52
16 h-m-p 0.0000 0.0001 1136.0875 ++ 4731.270270 m 0.0001 882 | 14/52
17 h-m-p 0.0000 0.0000 10242.6807 +YYYYYYY 4727.823067 6 0.0000 944 | 14/52
18 h-m-p 0.0000 0.0000 7276.9718 +YYYCCC 4724.739801 5 0.0000 1007 | 14/52
19 h-m-p 0.0000 0.0000 6831.6145 +YYYYCC 4714.140250 5 0.0000 1069 | 14/52
20 h-m-p 0.0000 0.0000 1393.4353 +YYYCCC 4708.020132 5 0.0000 1132 | 14/52
21 h-m-p 0.0000 0.0000 3589.2821 +YCCC 4703.931667 3 0.0000 1193 | 14/52
22 h-m-p 0.0000 0.0000 629.0635 +YYYYC 4701.077531 4 0.0000 1253 | 14/52
23 h-m-p 0.0000 0.0000 743.0382 +YCYCCC 4699.469368 5 0.0000 1317 | 14/52
24 h-m-p 0.0000 0.0000 1126.0986 +YCYCC 4697.359786 4 0.0000 1379 | 13/52
25 h-m-p 0.0000 0.0000 683.8477 YCC 4696.630837 2 0.0000 1437 | 13/52
26 h-m-p 0.0000 0.0001 474.3393 +YCYCC 4693.888099 4 0.0000 1499 | 13/52
27 h-m-p 0.0000 0.0000 522.0244 YCYCCC 4690.644368 5 0.0000 1562 | 13/52
28 h-m-p 0.0000 0.0000 546.4526 +YYYCYCYC 4686.459074 7 0.0000 1627 | 13/52
29 h-m-p 0.0000 0.0000 1828.7205 +CYYYC 4673.527641 4 0.0000 1688 | 13/52
30 h-m-p 0.0000 0.0000 3406.9050 +YYYCCC 4671.195553 5 0.0000 1751 | 13/52
31 h-m-p 0.0000 0.0000 867.5152 +CYYC 4665.459024 3 0.0000 1812 | 13/52
32 h-m-p 0.0000 0.0000 1725.1432 +YYYCCC 4652.227347 5 0.0000 1875 | 13/52
33 h-m-p 0.0000 0.0000 2116.6427 +CCC 4649.364561 2 0.0000 1935 | 13/52
34 h-m-p 0.0000 0.0000 582.8052 +YYYYYC 4644.234695 5 0.0000 1996 | 13/52
35 h-m-p 0.0000 0.0000 4440.6252 ++ 4639.412067 m 0.0000 2051 | 13/52
36 h-m-p 0.0000 0.0002 437.9934 +YYCCCCC 4619.853703 6 0.0002 2118 | 13/52
37 h-m-p 0.0000 0.0001 303.5988 +YYCCCC 4617.835445 5 0.0000 2182 | 13/52
38 h-m-p 0.0000 0.0002 469.4082 YCCC 4614.378868 3 0.0000 2242 | 13/52
39 h-m-p 0.0001 0.0004 143.6379 YCCCC 4611.291610 4 0.0002 2304 | 13/52
40 h-m-p 0.0000 0.0002 280.8309 YC 4609.329850 1 0.0001 2360 | 13/52
41 h-m-p 0.0002 0.0008 128.6496 YCC 4608.279864 2 0.0001 2418 | 13/52
42 h-m-p 0.0002 0.0009 86.6812 YCCC 4605.041362 3 0.0004 2478 | 13/52
43 h-m-p 0.0003 0.0017 46.8384 CCC 4604.119983 2 0.0004 2537 | 13/52
44 h-m-p 0.0005 0.0026 38.8879 CCCC 4602.821130 3 0.0007 2598 | 13/52
45 h-m-p 0.0020 0.0486 14.6125 +YYCCC 4585.916060 4 0.0110 2660 | 13/52
46 h-m-p 0.0092 0.0458 13.6128 CCC 4576.404559 2 0.0095 2719 | 13/52
47 h-m-p 0.0004 0.0019 52.1617 +YYYYYCCCCC 4558.019995 9 0.0016 2788 | 13/52
48 h-m-p 0.0017 0.0083 16.3210 +YCYYYYCCCC 4524.194309 10 0.0075 2858 | 13/52
49 h-m-p 0.0020 0.0101 1.6158 +YYYYCC 4520.137018 5 0.0077 2920 | 13/52
50 h-m-p 0.0026 0.0132 3.4622 +YYYYCC 4506.512662 5 0.0103 2982 | 13/52
51 h-m-p 0.0072 0.0361 2.7968 +CYCYYYYYCC 4458.848486 10 0.0344 3051 | 13/52
52 h-m-p 0.0117 0.0584 1.8208 +CYCCC 4441.652671 4 0.0494 3114 | 13/52
53 h-m-p 0.0222 0.1109 1.3253 +YCYCCC 4407.579762 5 0.1024 3179 | 13/52
54 h-m-p 0.1351 0.6753 0.6616 +YCCCC 4374.290997 4 0.3253 3242 | 13/52
55 h-m-p 0.1118 0.5588 0.2900 ++ 4338.682421 m 0.5588 3336 | 13/52
56 h-m-p 0.0026 0.0130 9.6751 +YYCCCC 4328.105431 5 0.0083 3439 | 13/52
57 h-m-p 0.1106 0.5529 0.2825 +YYCCC 4318.216391 4 0.3523 3501 | 13/52
58 h-m-p 0.0739 0.3696 0.5246 +YYCYYCCC 4300.726244 7 0.3238 3606 | 13/52
59 h-m-p 0.0471 0.2356 0.4018 YCYC 4297.778026 3 0.1009 3704 | 13/52
60 h-m-p 0.1174 0.9477 0.3453 ++ 4280.258393 m 0.9477 3798 | 13/52
61 h-m-p 0.0000 0.0000 0.9773
h-m-p: 7.23128832e-18 3.61564416e-17 9.77257372e-01 4280.258393
.. | 13/52
62 h-m-p 0.0000 0.0000 9448.0234 YCYCCC 4272.444543 5 0.0000 3991 | 13/52
63 h-m-p 0.0000 0.0000 1075.4272 YCCC 4267.887760 3 0.0000 4051 | 13/52
64 h-m-p 0.0000 0.0000 446.7605 +YYCCC 4265.906416 4 0.0000 4113 | 13/52
65 h-m-p 0.0000 0.0000 975.5923 YCCC 4264.307856 3 0.0000 4173 | 13/52
66 h-m-p 0.0000 0.0000 682.9302 CCCC 4263.232664 3 0.0000 4234 | 13/52
67 h-m-p 0.0000 0.0002 780.1331 +CCC 4258.308634 2 0.0001 4294 | 13/52
68 h-m-p 0.0000 0.0001 1045.2372 YCCC 4256.577770 3 0.0000 4354 | 13/52
69 h-m-p 0.0000 0.0001 833.5390 +YCCC 4253.216154 3 0.0000 4415 | 13/52
70 h-m-p 0.0000 0.0000 797.4644 +YCCC 4251.879181 3 0.0000 4476 | 13/52
71 h-m-p 0.0000 0.0000 1285.1960 YCC 4250.453625 2 0.0000 4534 | 13/52
72 h-m-p 0.0000 0.0001 947.6272 +YYCCC 4247.754782 4 0.0000 4596 | 13/52
73 h-m-p 0.0000 0.0001 1059.3344 YCCCC 4243.934435 4 0.0001 4658 | 13/52
74 h-m-p 0.0000 0.0000 1867.7706 +YYCCC 4240.601127 4 0.0000 4720 | 13/52
75 h-m-p 0.0000 0.0000 2208.4630 CYCC 4239.960739 3 0.0000 4780 | 13/52
76 h-m-p 0.0000 0.0001 403.5735 YC 4239.347609 1 0.0000 4836 | 13/52
77 h-m-p 0.0000 0.0002 195.5050 CCC 4239.059423 2 0.0000 4895 | 13/52
78 h-m-p 0.0001 0.0003 141.2895 CCC 4238.775429 2 0.0001 4954 | 13/52
79 h-m-p 0.0001 0.0004 148.1749 CCC 4238.528432 2 0.0001 5013 | 13/52
80 h-m-p 0.0001 0.0003 185.4938 CCC 4238.343620 2 0.0000 5072 | 13/52
81 h-m-p 0.0000 0.0003 188.4535 CCC 4238.077943 2 0.0001 5131 | 13/52
82 h-m-p 0.0001 0.0005 255.2123 CYC 4237.822781 2 0.0001 5189 | 13/52
83 h-m-p 0.0001 0.0005 100.9226 YC 4237.750416 1 0.0000 5245 | 13/52
84 h-m-p 0.0001 0.0005 92.3708 CCC 4237.666032 2 0.0001 5304 | 13/52
85 h-m-p 0.0000 0.0007 174.3355 YC 4237.478631 1 0.0001 5360 | 13/52
86 h-m-p 0.0001 0.0008 226.3357 YCC 4237.340864 2 0.0001 5418 | 13/52
87 h-m-p 0.0003 0.0019 46.9264 CCC 4237.178661 2 0.0004 5477 | 13/52
88 h-m-p 0.0000 0.0003 472.8526 CCC 4236.940728 2 0.0001 5536 | 13/52
89 h-m-p 0.0001 0.0005 290.2386 CC 4236.752445 1 0.0001 5593 | 13/52
90 h-m-p 0.0001 0.0003 409.0072 YYC 4236.590736 2 0.0000 5650 | 13/52
91 h-m-p 0.0002 0.0009 38.6629 YC 4236.570946 1 0.0001 5706 | 13/52
92 h-m-p 0.0000 0.0025 83.4790 CC 4236.548124 1 0.0000 5763 | 13/52
93 h-m-p 0.0001 0.0042 59.0776 +CC 4236.473827 1 0.0002 5821 | 13/52
94 h-m-p 0.0004 0.0021 23.3234 YC 4236.454739 1 0.0002 5877 | 13/52
95 h-m-p 0.0000 0.0030 124.8082 +YC 4236.304091 1 0.0003 5934 | 13/52
96 h-m-p 0.0004 0.0060 96.6478 CCC 4236.107934 2 0.0005 5993 | 13/52
97 h-m-p 0.0005 0.0069 103.5225 CC 4235.864269 1 0.0006 6050 | 13/52
98 h-m-p 0.0014 0.0095 42.6154 YC 4235.737690 1 0.0008 6106 | 13/52
99 h-m-p 0.0041 0.1431 8.3279 YCC 4235.580236 2 0.0071 6164 | 13/52
100 h-m-p 0.0062 0.0349 9.6373 YC 4235.559131 1 0.0010 6220 | 13/52
101 h-m-p 0.1048 3.8364 0.0931 ++YYC 4232.866882 2 1.4330 6279 | 13/52
102 h-m-p 1.6000 8.0000 0.0419 CCC 4232.415362 2 1.2848 6377 | 13/52
103 h-m-p 1.6000 8.0000 0.0179 CCC 4232.303599 2 1.9062 6475 | 13/52
104 h-m-p 1.6000 8.0000 0.0041 YCC 4232.214340 2 2.9814 6572 | 13/52
105 h-m-p 1.6000 8.0000 0.0046 CCCC 4232.108251 3 2.4198 6672 | 13/52
106 h-m-p 0.8842 8.0000 0.0127 CC 4232.077017 1 1.2480 6768 | 13/52
107 h-m-p 1.6000 8.0000 0.0026 CC 4232.073781 1 0.4992 6864 | 13/52
108 h-m-p 1.1980 8.0000 0.0011 C 4232.072217 0 1.0343 6958 | 13/52
109 h-m-p 1.6000 8.0000 0.0003 Y 4232.072070 0 1.0916 7052 | 13/52
110 h-m-p 1.6000 8.0000 0.0001 Y 4232.072049 0 1.0539 7146 | 13/52
111 h-m-p 1.6000 8.0000 0.0000 Y 4232.072049 0 1.0593 7240 | 13/52
112 h-m-p 1.6000 8.0000 0.0000 Y 4232.072049 0 1.0159 7334 | 13/52
113 h-m-p 1.6000 8.0000 0.0000 C 4232.072048 0 1.9417 7428 | 13/52
114 h-m-p 1.6000 8.0000 0.0000 Y 4232.072048 0 0.2671 7522 | 13/52
115 h-m-p 0.2929 8.0000 0.0000 Y 4232.072048 0 0.4966 7616 | 13/52
116 h-m-p 0.8561 8.0000 0.0000 C 4232.072048 0 0.2140 7710 | 13/52
117 h-m-p 0.2518 8.0000 0.0000 Y 4232.072048 0 0.2518 7804 | 13/52
118 h-m-p 0.3495 8.0000 0.0000 C 4232.072048 0 0.3474 7898 | 13/52
119 h-m-p 0.5306 8.0000 0.0000 ------Y 4232.072048 0 0.0000 7998
Out..
lnL = -4232.072048
7999 lfun, 23997 eigenQcodon, 783902 P(t)
end of tree file.
Time used: 7:52
Model 2: PositiveSelection
TREE # 1
(4, 9, (((((((12, 27), (((15, (28, ((26, 7), 29), 5)), 22), 1)), 30), 11), 17), 3, 18), 2, (20, 24), ((19, 14), 13), (21, (6, 23), 8), 16, (25, 10))); MP score: 572
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
32
0.086227 0.027845 0.078481 0.101458 0.023429 0.055925 0.034424 0.019689 0.037267 0.014925 0.101196 0.049121 0.067773 0.026469 0.091785 0.091270 0.078472 0.084592 0.030200 0.076168 0.046853 0.094778 0.051472 0.040793 0.079745 0.092966 0.072642 0.036714 0.089529 0.011733 0.108183 0.021602 0.042135 0.035832 0.078296 0.064336 0.062742 0.064266 0.033514 0.068357 0.060143 0.071104 0.094048 0.092973 0.105692 0.032201 0.077324 0.027310 0.077776 2.120626 1.300348 0.360684 0.246285 1.424192
ntime & nrate & np: 49 3 54
Bounds (np=54):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 6.158279
np = 54
lnL0 = -5578.182931
Iterating by ming2
Initial: fx= 5578.182931
x= 0.08623 0.02785 0.07848 0.10146 0.02343 0.05593 0.03442 0.01969 0.03727 0.01493 0.10120 0.04912 0.06777 0.02647 0.09178 0.09127 0.07847 0.08459 0.03020 0.07617 0.04685 0.09478 0.05147 0.04079 0.07974 0.09297 0.07264 0.03671 0.08953 0.01173 0.10818 0.02160 0.04213 0.03583 0.07830 0.06434 0.06274 0.06427 0.03351 0.06836 0.06014 0.07110 0.09405 0.09297 0.10569 0.03220 0.07732 0.02731 0.07778 2.12063 1.30035 0.36068 0.24629 1.42419
1 h-m-p 0.0000 0.0001 8088.4212 ++ 4846.724549 m 0.0001 59 | 0/54
2 h-m-p 0.0000 0.0000 1165579.7261 ++ 4744.267725 m 0.0000 116 | 1/54
3 h-m-p 0.0000 0.0000 1444.1398 ++ 4652.123800 m 0.0000 173 | 2/54
4 h-m-p 0.0000 0.0000 14479.0811 ++ 4580.104738 m 0.0000 230 | 3/54
5 h-m-p 0.0000 0.0000 9174.9669 ++ 4506.442500 m 0.0000 287 | 4/54
6 h-m-p 0.0000 0.0000 5589.5663 ++ 4495.304180 m 0.0000 344 | 5/54
7 h-m-p 0.0000 0.0000 92232.5750 ++ 4489.545471 m 0.0000 401 | 6/54
8 h-m-p 0.0000 0.0000 256529.8921 ++ 4448.965692 m 0.0000 458 | 7/54
9 h-m-p 0.0000 0.0000 3458.2398 ++ 4440.843170 m 0.0000 515 | 8/54
10 h-m-p 0.0000 0.0000 2063.6409 ++ 4439.039317 m 0.0000 572 | 9/54
11 h-m-p 0.0000 0.0000 2465.6226 ++ 4424.197913 m 0.0000 629 | 10/54
12 h-m-p 0.0000 0.0000 3029.0437 ++ 4415.093426 m 0.0000 686 | 11/54
13 h-m-p 0.0000 0.0000 3390.1657 ++ 4410.417116 m 0.0000 743 | 12/54
14 h-m-p 0.0000 0.0000 4064.7147 ++ 4409.445488 m 0.0000 800 | 13/54
15 h-m-p 0.0000 0.0000 2195.0648 ++ 4409.272546 m 0.0000 857 | 14/54
16 h-m-p 0.0000 0.0001 453.0240 +CYYCCC 4400.188187 5 0.0001 924 | 14/54
17 h-m-p 0.0000 0.0000 1010.5802 +YYYC 4396.614709 3 0.0000 985 | 14/54
18 h-m-p 0.0000 0.0000 1416.9685 +CYCCC 4391.259764 4 0.0000 1050 | 14/54
19 h-m-p 0.0000 0.0000 3714.8622 +YYCCCC 4386.787105 5 0.0000 1116 | 14/54
20 h-m-p 0.0000 0.0000 1413.5407 +YYYYCC 4378.740387 5 0.0000 1180 | 14/54
21 h-m-p 0.0000 0.0000 1483.2932 +YYCYYYYC 4370.487565 7 0.0000 1246 | 14/54
22 h-m-p 0.0000 0.0002 1174.9237 +CYYCYCCC 4348.227975 7 0.0002 1315 | 13/54
23 h-m-p 0.0000 0.0000 5631.1764 +YCCCC 4343.044258 4 0.0000 1380 | 13/54
24 h-m-p 0.0000 0.0000 4703.9458 +YYCCCC 4338.500838 5 0.0000 1446 | 13/54
25 h-m-p 0.0000 0.0000 9541.5151 +YYYCYCCC 4326.353653 7 0.0000 1514 | 13/54
26 h-m-p 0.0000 0.0001 3244.4222 ++ 4307.115952 m 0.0001 1571 | 14/54
27 h-m-p 0.0000 0.0002 1052.5309 +YYYCC 4297.223719 4 0.0001 1634 | 14/54
28 h-m-p 0.0000 0.0001 646.3334 +YYYYYCCCC 4291.953888 8 0.0001 1703 | 14/54
29 h-m-p 0.0000 0.0002 462.2283 +YYCCCC 4285.791498 5 0.0001 1769 | 14/54
30 h-m-p 0.0001 0.0004 288.0964 YCCC 4282.598786 3 0.0002 1831 | 14/54
31 h-m-p 0.0001 0.0006 162.5074 YCCCC 4280.325744 4 0.0002 1895 | 14/54
32 h-m-p 0.0002 0.0011 120.6013 YCCCC 4277.318538 4 0.0005 1959 | 14/54
33 h-m-p 0.0002 0.0010 188.4277 CCC 4275.080883 2 0.0003 2020 | 14/54
34 h-m-p 0.0001 0.0006 192.2369 YCCCC 4272.859088 4 0.0003 2084 | 14/54
35 h-m-p 0.0001 0.0005 216.3632 +YYYCCC 4267.919738 5 0.0004 2149 | 14/54
36 h-m-p 0.0000 0.0001 1104.4370 +YYCCC 4265.063207 4 0.0001 2213 | 14/54
37 h-m-p 0.0003 0.0016 58.4227 YCCCC 4263.363092 4 0.0006 2277 | 14/54
38 h-m-p 0.0003 0.0017 84.6601 YCCCC 4260.784812 4 0.0008 2341 | 14/54
39 h-m-p 0.0004 0.0021 46.9199 CCCC 4259.773324 3 0.0007 2404 | 14/54
40 h-m-p 0.0007 0.0033 35.4472 YCCCC 4258.055121 4 0.0014 2468 | 14/54
41 h-m-p 0.0002 0.0009 113.0278 +YYCCC 4255.424630 4 0.0006 2532 | 14/54
42 h-m-p 0.0006 0.0032 38.4523 CCC 4254.848637 2 0.0007 2593 | 14/54
43 h-m-p 0.0020 0.0147 12.6695 CCC 4254.267075 2 0.0029 2654 | 14/54
44 h-m-p 0.0017 0.0111 21.4998 CCC 4253.632276 2 0.0019 2715 | 14/54
45 h-m-p 0.0044 0.0218 6.5329 CCCC 4252.520226 3 0.0076 2778 | 14/54
46 h-m-p 0.0124 0.0621 3.6419 +YYCCC 4249.688399 4 0.0382 2842 | 14/54
47 h-m-p 0.0037 0.0187 11.5745 CCCC 4248.209546 3 0.0065 2905 | 14/54
48 h-m-p 0.0150 0.0751 3.0599 +YYCCC 4245.118344 4 0.0498 2969 | 14/54
49 h-m-p 0.0571 0.2856 1.8148 YCCC 4241.577196 3 0.1176 3031 | 14/54
50 h-m-p 0.0560 0.2798 1.3241 YCCC 4240.351882 3 0.1005 3093 | 14/54
51 h-m-p 0.0374 0.1869 1.6215 +YYCCC 4238.478592 4 0.1125 3157 | 14/54
52 h-m-p 0.0756 0.3782 1.4924 YCCC 4237.898227 3 0.0388 3219 | 14/54
53 h-m-p 0.1518 0.7590 0.2817 YCCCC 4236.621188 4 0.3601 3283 | 14/54
54 h-m-p 0.0806 0.4032 0.6922 YCCCC 4235.782192 4 0.1538 3387 | 14/54
55 h-m-p 0.2712 1.3560 0.1571 CYC 4235.422172 2 0.2903 3487 | 14/54
56 h-m-p 0.2805 2.0843 0.1626 CCC 4235.052976 2 0.3824 3588 | 14/54
57 h-m-p 0.3159 1.8113 0.1968 YC 4234.970354 1 0.2119 3686 | 14/54
58 h-m-p 0.6894 3.4468 0.0556 YCC 4234.839931 2 0.3825 3786 | 14/54
59 h-m-p 0.3216 3.7913 0.0661 YC 4234.687776 1 0.6410 3884 | 14/54
60 h-m-p 0.8803 8.0000 0.0481 CYC 4234.466867 2 0.9732 3984 | 14/54
61 h-m-p 0.7072 8.0000 0.0663 CCC 4234.305391 2 0.6478 4085 | 14/54
62 h-m-p 0.9929 4.9643 0.0268 CCC 4234.120055 2 1.1689 4186 | 14/54
63 h-m-p 0.8311 8.0000 0.0378 CCC 4233.970493 2 1.2197 4287 | 14/54
64 h-m-p 1.6000 8.0000 0.0275 CCC 4233.899305 2 1.3458 4388 | 14/54
65 h-m-p 1.0088 8.0000 0.0366 CCC 4233.826751 2 1.4165 4489 | 14/54
66 h-m-p 1.6000 8.0000 0.0147 CCC 4233.736432 2 2.5700 4590 | 14/54
67 h-m-p 1.6000 8.0000 0.0184 CC 4233.674456 1 1.9424 4689 | 14/54
68 h-m-p 1.6000 8.0000 0.0111 CC 4233.628400 1 1.6704 4788 | 14/54
69 h-m-p 1.6000 8.0000 0.0092 CCC 4233.557757 2 2.3558 4889 | 14/54
70 h-m-p 1.6000 8.0000 0.0067 CC 4233.474989 1 2.3141 4988 | 14/54
71 h-m-p 1.6000 8.0000 0.0089 YC 4233.301746 1 2.9887 5086 | 14/54
72 h-m-p 1.6000 8.0000 0.0154 YC 4232.966986 1 3.6051 5184 | 14/54
73 h-m-p 1.6000 8.0000 0.0189 CCC 4232.730371 2 2.5956 5285 | 14/54
74 h-m-p 1.3540 8.0000 0.0362 YCCC 4232.527335 3 2.5223 5387 | 14/54
75 h-m-p 1.6000 8.0000 0.0321 CC 4232.410111 1 1.3037 5486 | 14/54
76 h-m-p 1.3457 6.7283 0.0111 CCC 4232.343335 2 1.4224 5587 | 14/54
77 h-m-p 1.6000 8.0000 0.0050 CC 4232.326072 1 1.3856 5686 | 14/54
78 h-m-p 1.0635 8.0000 0.0065 +YC 4232.317293 1 2.8121 5785 | 14/54
79 h-m-p 1.6000 8.0000 0.0055 +CC 4232.284624 1 6.7061 5885 | 14/54
80 h-m-p 1.1785 8.0000 0.0311 +CCC 4232.178473 2 5.1130 5987 | 14/54
81 h-m-p 1.6000 8.0000 0.0305 CCC 4232.105844 2 2.1398 6088 | 14/54
82 h-m-p 1.6000 8.0000 0.0092 CC 4232.078653 1 1.6432 6187 | 14/54
83 h-m-p 1.1414 8.0000 0.0133 CC 4232.073083 1 1.3296 6286 | 14/54
84 h-m-p 1.6000 8.0000 0.0056 YC 4232.072159 1 1.0505 6384 | 14/54
85 h-m-p 1.6000 8.0000 0.0007 Y 4232.072065 0 0.9932 6481 | 14/54
86 h-m-p 0.4854 8.0000 0.0014 Y 4232.072052 0 0.8146 6578 | 14/54
87 h-m-p 1.6000 8.0000 0.0004 Y 4232.072049 0 1.1535 6675 | 14/54
88 h-m-p 1.6000 8.0000 0.0000 C 4232.072049 0 1.3237 6772 | 14/54
89 h-m-p 1.6000 8.0000 0.0000 C 4232.072048 0 1.5308 6869 | 14/54
90 h-m-p 1.6000 8.0000 0.0000 C 4232.072048 0 1.4945 6966 | 14/54
91 h-m-p 1.6000 8.0000 0.0000 --Y 4232.072048 0 0.0250 7065 | 14/54
92 h-m-p 0.0183 8.0000 0.0000 ------------Y 4232.072048 0 0.0000 7174
Out..
lnL = -4232.072048
7175 lfun, 28700 eigenQcodon, 1054725 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -4247.263733 S = -4037.114410 -217.631454
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 299 patterns 18:33
did 20 / 299 patterns 18:33
did 30 / 299 patterns 18:33
did 40 / 299 patterns 18:33
did 50 / 299 patterns 18:33
did 60 / 299 patterns 18:33
did 70 / 299 patterns 18:33
did 80 / 299 patterns 18:33
did 90 / 299 patterns 18:33
did 100 / 299 patterns 18:33
did 110 / 299 patterns 18:33
did 120 / 299 patterns 18:34
did 130 / 299 patterns 18:34
did 140 / 299 patterns 18:34
did 150 / 299 patterns 18:34
did 160 / 299 patterns 18:34
did 170 / 299 patterns 18:34
did 180 / 299 patterns 18:34
did 190 / 299 patterns 18:34
did 200 / 299 patterns 18:34
did 210 / 299 patterns 18:34
did 220 / 299 patterns 18:34
did 230 / 299 patterns 18:34
did 240 / 299 patterns 18:34
did 250 / 299 patterns 18:34
did 260 / 299 patterns 18:34
did 270 / 299 patterns 18:34
did 280 / 299 patterns 18:34
did 290 / 299 patterns 18:34
did 299 / 299 patterns 18:34end of tree file.
Time used: 18:34
Model 7: beta
TREE # 1
(4, 9, (((((((12, 27), (((15, (28, ((26, 7), 29), 5)), 22), 1)), 30), 11), 17), 3, 18), 2, (20, 24), ((19, 14), 13), (21, (6, 23), 8), 16, (25, 10))); MP score: 572
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
32
0.063833 0.012859 0.055326 0.038350 0.027176 0.062152 0.097483 0.080223 0.070273 0.025610 0.087659 0.028046 0.039091 0.096771 0.093617 0.071620 0.038527 0.045939 0.074472 0.013216 0.101813 0.021253 0.054336 0.076990 0.063334 0.025439 0.086113 0.071434 0.077058 0.016682 0.035105 0.090777 0.097752 0.057057 0.087139 0.016305 0.017186 0.106957 0.060889 0.053510 0.022495 0.038956 0.079086 0.016019 0.018910 0.019537 0.028302 0.042238 0.034018 2.120624 0.921366 1.019965
ntime & nrate & np: 49 1 52
Bounds (np=52):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 7.312966
np = 52
lnL0 = -5369.316277
Iterating by ming2
Initial: fx= 5369.316277
x= 0.06383 0.01286 0.05533 0.03835 0.02718 0.06215 0.09748 0.08022 0.07027 0.02561 0.08766 0.02805 0.03909 0.09677 0.09362 0.07162 0.03853 0.04594 0.07447 0.01322 0.10181 0.02125 0.05434 0.07699 0.06333 0.02544 0.08611 0.07143 0.07706 0.01668 0.03511 0.09078 0.09775 0.05706 0.08714 0.01631 0.01719 0.10696 0.06089 0.05351 0.02250 0.03896 0.07909 0.01602 0.01891 0.01954 0.02830 0.04224 0.03402 2.12062 0.92137 1.01996
1 h-m-p 0.0000 0.0000 5192.6116 ++ 4869.577786 m 0.0000 57 | 1/52
2 h-m-p 0.0000 0.0000 1794.7551 ++ 4843.255063 m 0.0000 112 | 2/52
3 h-m-p 0.0000 0.0000 16166.3851 ++ 4833.079404 m 0.0000 167 | 3/52
4 h-m-p 0.0000 0.0000 50636.7942 ++ 4806.966537 m 0.0000 222 | 4/52
5 h-m-p 0.0000 0.0000 284785.2272 ++ 4798.116002 m 0.0000 277 | 5/52
6 h-m-p 0.0000 0.0000 967882.2400 ++ 4757.201109 m 0.0000 332 | 6/52
7 h-m-p 0.0000 0.0000 3171.8696 ++ 4719.083704 m 0.0000 387 | 7/52
8 h-m-p 0.0000 0.0000 7786.3642 ++ 4692.868598 m 0.0000 442 | 8/52
9 h-m-p 0.0000 0.0000 3975.0118 ++ 4656.751728 m 0.0000 497 | 9/52
10 h-m-p 0.0000 0.0000 6282.0199 ++ 4608.761571 m 0.0000 552 | 10/52
11 h-m-p 0.0000 0.0000 2250.1210 ++ 4556.344446 m 0.0000 607 | 11/52
12 h-m-p 0.0000 0.0000 3189.7694 ++ 4553.757482 m 0.0000 662 | 12/52
13 h-m-p 0.0000 0.0000 3916.7486 ++ 4528.687008 m 0.0000 717 | 13/52
14 h-m-p 0.0000 0.0000 5111.0047 ++ 4525.486242 m 0.0000 772 | 14/52
15 h-m-p 0.0000 0.0000 2625.9727 ++ 4497.142327 m 0.0000 827 | 14/52
16 h-m-p 0.0000 0.0000 29879.0847 +YYCYC 4493.627668 4 0.0000 888 | 14/52
17 h-m-p 0.0000 0.0000 3205.8974 ++ 4479.901747 m 0.0000 943 | 14/52
18 h-m-p 0.0000 0.0000 54669.4058 +YYYCCC 4465.693444 5 0.0000 1006 | 14/52
19 h-m-p 0.0000 0.0000 6294.4816 +YCYYYCCCCC 4446.473392 9 0.0000 1076 | 14/52
20 h-m-p 0.0000 0.0000 10718.9780 +YYYCYCCC 4436.220792 7 0.0000 1142 | 14/52
21 h-m-p 0.0000 0.0000 19890.6961 +YYYCCC 4432.962292 5 0.0000 1205 | 13/52
22 h-m-p 0.0000 0.0000 169350.6553 +YYCYC 4431.746232 4 0.0000 1266 | 13/52
23 h-m-p 0.0000 0.0000 43234.3326 +YYCYCCC 4410.290484 6 0.0000 1331 | 13/52
24 h-m-p 0.0000 0.0000 4997.8903 +YYCCC 4405.076985 4 0.0000 1393 | 13/52
25 h-m-p 0.0000 0.0000 1635.1315 YCCCC 4403.918637 4 0.0000 1455 | 13/52
26 h-m-p 0.0000 0.0000 3049.1717 +YYCCC 4395.137745 4 0.0000 1517 | 13/52
27 h-m-p 0.0000 0.0000 1161.7182 YCCC 4393.307320 3 0.0000 1577 | 13/52
28 h-m-p 0.0000 0.0001 458.8405 YCCC 4390.962703 3 0.0001 1637 | 13/52
29 h-m-p 0.0000 0.0001 409.3692 YCCC 4389.499380 3 0.0000 1697 | 13/52
30 h-m-p 0.0000 0.0001 345.3173 YCCC 4387.489519 3 0.0001 1757 | 13/52
31 h-m-p 0.0000 0.0002 188.7522 YCCCC 4385.687021 4 0.0001 1819 | 13/52
32 h-m-p 0.0001 0.0004 113.9693 CYCCC 4384.551162 4 0.0001 1881 | 13/52
33 h-m-p 0.0001 0.0006 137.8483 CCCC 4383.769586 3 0.0001 1942 | 13/52
34 h-m-p 0.0001 0.0009 154.9264 +YCYCCC 4380.017242 5 0.0005 2006 | 13/52
35 h-m-p 0.0002 0.0010 203.8773 CCCC 4377.553175 3 0.0003 2067 | 13/52
36 h-m-p 0.0002 0.0018 355.0741 +YCCC 4371.778364 3 0.0006 2128 | 13/52
37 h-m-p 0.0002 0.0011 428.8758 YCC 4364.490141 2 0.0005 2186 | 13/52
38 h-m-p 0.0002 0.0008 219.2890 +YYCCC 4360.686041 4 0.0005 2248 | 13/52
39 h-m-p 0.0002 0.0012 50.0746 CCC 4360.298751 2 0.0002 2307 | 13/52
40 h-m-p 0.0002 0.0010 35.9075 YCYCC 4359.678253 4 0.0005 2368 | 13/52
41 h-m-p 0.0004 0.0019 40.6825 CCCC 4359.096525 3 0.0006 2429 | 13/52
42 h-m-p 0.0009 0.0063 26.0326 +CYCCC 4355.780384 4 0.0044 2492 | 13/52
43 h-m-p 0.0001 0.0005 110.4715 +YCYC 4354.933838 3 0.0003 2552 | 13/52
44 h-m-p 0.0008 0.0038 24.1669 YCCC 4354.193400 3 0.0018 2612 | 13/52
45 h-m-p 0.0009 0.0157 48.0540 +YCCCC 4348.549708 4 0.0071 2675 | 13/52
46 h-m-p 0.0036 0.0181 9.0457 +YYYYYCCCC 4344.313183 8 0.0148 2742 | 13/52
47 h-m-p 0.0016 0.0078 7.4705 +YCYC 4343.647804 3 0.0046 2802 | 13/52
48 h-m-p 0.0040 0.0586 8.5023 +YCYCCC 4339.907769 5 0.0345 2866 | 13/52
49 h-m-p 0.0306 0.1529 1.2236 +YYYYC 4330.257900 4 0.1193 2926 | 13/52
50 h-m-p 0.0080 0.0400 5.0431 YCCC 4327.241437 3 0.0139 2986 | 13/52
51 h-m-p 0.0712 0.3560 0.3580 +CYCCC 4308.596306 4 0.3383 3050 | 13/52
52 h-m-p 0.2207 1.1036 0.2153 +YYCCCC 4290.871730 5 0.7881 3153 | 13/52
53 h-m-p 0.2015 1.0075 0.3565 +YYC 4276.803449 2 0.6326 3250 | 13/52
54 h-m-p 0.3533 1.7666 0.3588 +YYCCC 4259.518300 4 1.2622 3351 | 13/52
55 h-m-p 0.1887 0.9437 0.3067 +YYYCCC 4253.196779 5 0.6955 3453 | 13/52
56 h-m-p 0.2691 1.3457 0.1428 +YCCC 4250.608055 3 0.7558 3553 | 13/52
57 h-m-p 0.2122 1.0611 0.3268 YCCC 4248.253885 3 0.3879 3652 | 13/52
58 h-m-p 0.2136 1.0678 0.1688 +YYYCCC 4242.530366 5 0.7762 3754 | 13/52
59 h-m-p 0.1891 0.9457 0.2029 YCCCC 4239.500460 4 0.4487 3855 | 13/52
60 h-m-p 0.5750 2.8748 0.0985 YCCC 4236.610723 3 1.1060 3954 | 13/52
61 h-m-p 0.7264 3.6321 0.0437 YCCC 4235.042806 3 1.1250 4053 | 13/52
62 h-m-p 0.6987 4.8484 0.0704 YCCC 4233.538798 3 1.5628 4152 | 13/52
63 h-m-p 1.1634 5.8170 0.0736 CCC 4232.654845 2 1.1053 4250 | 13/52
64 h-m-p 0.7597 8.0000 0.1070 YC 4231.626269 1 1.8255 4345 | 13/52
65 h-m-p 1.6000 8.0000 0.1024 CC 4230.956702 1 1.6395 4441 | 13/52
66 h-m-p 1.4951 8.0000 0.1123 CCCC 4230.489173 3 2.2182 4541 | 13/52
67 h-m-p 1.6000 8.0000 0.0594 CCC 4230.316591 2 1.8819 4639 | 13/52
68 h-m-p 1.6000 8.0000 0.0294 CC 4230.211015 1 2.5329 4735 | 13/52
69 h-m-p 1.6000 8.0000 0.0051 YC 4230.112232 1 3.0067 4830 | 13/52
70 h-m-p 1.6000 8.0000 0.0046 +YC 4229.982996 1 4.5240 4926 | 13/52
71 h-m-p 0.6881 8.0000 0.0301 +YC 4229.792464 1 3.9950 5022 | 13/52
72 h-m-p 1.6000 8.0000 0.0137 +YC 4229.499517 1 4.1151 5118 | 13/52
73 h-m-p 0.9830 8.0000 0.0572 +CC 4229.067172 1 3.4853 5215 | 13/52
74 h-m-p 1.6000 8.0000 0.0661 CCC 4228.823054 2 1.9298 5313 | 13/52
75 h-m-p 1.6000 8.0000 0.0209 YC 4228.695562 1 2.6404 5408 | 13/52
76 h-m-p 1.6000 8.0000 0.0094 YC 4228.512487 1 3.8651 5503 | 13/52
77 h-m-p 1.6000 8.0000 0.0208 YCCC 4228.272795 3 3.0763 5602 | 13/52
78 h-m-p 1.6000 8.0000 0.0239 CCC 4228.101058 2 2.5307 5700 | 13/52
79 h-m-p 1.6000 8.0000 0.0118 YC 4227.910421 1 3.0760 5795 | 13/52
80 h-m-p 1.6000 8.0000 0.0139 YC 4227.743800 1 2.9272 5890 | 13/52
81 h-m-p 1.6000 8.0000 0.0078 CCC 4227.611582 2 2.4508 5988 | 13/52
82 h-m-p 1.3721 8.0000 0.0140 YC 4227.560679 1 2.5435 6083 | 13/52
83 h-m-p 1.6000 8.0000 0.0100 YC 4227.528817 1 2.6152 6178 | 13/52
84 h-m-p 1.6000 8.0000 0.0089 CC 4227.511237 1 2.2507 6274 | 13/52
85 h-m-p 1.6000 8.0000 0.0039 CC 4227.501298 1 2.5087 6370 | 13/52
86 h-m-p 1.6000 8.0000 0.0045 YC 4227.487140 1 3.8249 6465 | 13/52
87 h-m-p 1.6000 8.0000 0.0018 +CC 4227.460540 1 5.6736 6562 | 13/52
88 h-m-p 0.9077 8.0000 0.0115 +YC 4227.426247 1 3.0614 6658 | 13/52
89 h-m-p 1.6000 8.0000 0.0063 CC 4227.409898 1 2.5331 6754 | 13/52
90 h-m-p 1.6000 8.0000 0.0045 YC 4227.398693 1 2.9803 6849 | 13/52
91 h-m-p 1.6000 8.0000 0.0029 +YC 4227.382644 1 4.3794 6945 | 13/52
92 h-m-p 1.6000 8.0000 0.0058 YC 4227.371832 1 2.8761 7040 | 13/52
93 h-m-p 1.6000 8.0000 0.0024 YC 4227.364912 1 3.3016 7135 | 13/52
94 h-m-p 1.6000 8.0000 0.0019 +YC 4227.353861 1 4.8708 7231 | 13/52
95 h-m-p 1.6000 8.0000 0.0009 YC 4227.344492 1 3.1900 7326 | 13/52
96 h-m-p 1.2721 8.0000 0.0023 +YC 4227.331660 1 3.6048 7422 | 13/52
97 h-m-p 1.6000 8.0000 0.0025 CC 4227.324860 1 1.9846 7518 | 13/52
98 h-m-p 0.6523 8.0000 0.0077 +CC 4227.321887 1 2.2713 7615 | 13/52
99 h-m-p 1.6000 8.0000 0.0022 YC 4227.318921 1 3.5945 7710 | 13/52
100 h-m-p 1.6000 8.0000 0.0026 CC 4227.317071 1 2.3425 7806 | 13/52
101 h-m-p 1.6000 8.0000 0.0007 YC 4227.315732 1 3.3616 7901 | 13/52
102 h-m-p 1.6000 8.0000 0.0010 +C 4227.312014 0 6.3687 7996 | 13/52
103 h-m-p 1.6000 8.0000 0.0015 YC 4227.306573 1 3.6079 8091 | 13/52
104 h-m-p 1.6000 8.0000 0.0027 CC 4227.302967 1 2.5289 8187 | 13/52
105 h-m-p 1.6000 8.0000 0.0006 C 4227.302124 0 1.9088 8281 | 13/52
106 h-m-p 1.6000 8.0000 0.0002 C 4227.302070 0 1.3517 8375 | 13/52
107 h-m-p 1.6000 8.0000 0.0000 +C 4227.302034 0 5.7886 8470 | 13/52
108 h-m-p 1.6000 8.0000 0.0001 ++ 4227.301777 m 8.0000 8564 | 13/52
109 h-m-p 1.6000 8.0000 0.0002 C 4227.301509 0 1.4612 8658 | 13/52
110 h-m-p 0.6137 8.0000 0.0006 +C 4227.301409 0 2.4942 8753 | 13/52
111 h-m-p 1.6000 8.0000 0.0003 C 4227.301396 0 1.7857 8847 | 13/52
112 h-m-p 1.6000 8.0000 0.0001 Y 4227.301393 0 3.0571 8941 | 13/52
113 h-m-p 1.6000 8.0000 0.0000 ++ 4227.301381 m 8.0000 9035 | 13/52
114 h-m-p 1.6000 8.0000 0.0001 ++ 4227.301307 m 8.0000 9129 | 13/52
115 h-m-p 1.6000 8.0000 0.0001 ++ 4227.300864 m 8.0000 9223 | 13/52
116 h-m-p 1.6000 8.0000 0.0001 YC 4227.300136 1 3.9719 9318 | 13/52
117 h-m-p 1.6000 8.0000 0.0003 C 4227.299967 0 1.5218 9412 | 13/52
118 h-m-p 1.6000 8.0000 0.0001 C 4227.299942 0 2.0622 9506 | 13/52
119 h-m-p 1.6000 8.0000 0.0000 C 4227.299939 0 1.5683 9600 | 13/52
120 h-m-p 1.6000 8.0000 0.0000 Y 4227.299939 0 0.9687 9694 | 13/52
121 h-m-p 1.6000 8.0000 0.0000 C 4227.299939 0 0.4863 9788 | 13/52
122 h-m-p 0.8261 8.0000 0.0000 --Y 4227.299939 0 0.0129 9884
Out..
lnL = -4227.299939
9885 lfun, 108735 eigenQcodon, 4843650 P(t)
end of tree file.
Time used: 1:06:52
Model 8: beta&w>1
TREE # 1
(4, 9, (((((((12, 27), (((15, (28, ((26, 7), 29), 5)), 22), 1)), 30), 11), 17), 3, 18), 2, (20, 24), ((19, 14), 13), (21, (6, 23), 8), 16, (25, 10))); MP score: 572
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
32
0.105651 0.095760 0.089930 0.076508 0.054704 0.051351 0.061801 0.064690 0.093221 0.069291 0.109937 0.026864 0.087280 0.041689 0.012473 0.093788 0.059496 0.079046 0.019644 0.091323 0.106643 0.064724 0.066861 0.051487 0.051548 0.011263 0.043165 0.049581 0.015208 0.035736 0.038481 0.072081 0.070054 0.046343 0.068132 0.094974 0.010304 0.107421 0.048019 0.027237 0.050351 0.025054 0.068939 0.049131 0.037106 0.070484 0.093449 0.050017 0.037247 2.022306 0.900000 0.434963 1.637339 1.300000
ntime & nrate & np: 49 2 54
Bounds (np=54):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 9.487387
np = 54
lnL0 = -5247.997268
Iterating by ming2
Initial: fx= 5247.997268
x= 0.10565 0.09576 0.08993 0.07651 0.05470 0.05135 0.06180 0.06469 0.09322 0.06929 0.10994 0.02686 0.08728 0.04169 0.01247 0.09379 0.05950 0.07905 0.01964 0.09132 0.10664 0.06472 0.06686 0.05149 0.05155 0.01126 0.04316 0.04958 0.01521 0.03574 0.03848 0.07208 0.07005 0.04634 0.06813 0.09497 0.01030 0.10742 0.04802 0.02724 0.05035 0.02505 0.06894 0.04913 0.03711 0.07048 0.09345 0.05002 0.03725 2.02231 0.90000 0.43496 1.63734 1.30000
1 h-m-p 0.0000 0.0000 4264.9641 ++ 4929.550454 m 0.0000 59 | 1/54
2 h-m-p 0.0000 0.0000 2198.6055 ++ 4871.882806 m 0.0000 116 | 2/54
3 h-m-p 0.0000 0.0000 4783.3670 ++ 4704.384749 m 0.0000 173 | 3/54
4 h-m-p 0.0000 0.0000 40383.6241 ++ 4679.929123 m 0.0000 230 | 3/54
5 h-m-p 0.0000 0.0000 25453.6210 +CYYCYCCC 4670.763700 7 0.0000 299 | 3/54
6 h-m-p 0.0000 0.0000 13306.7630 +YYCYCYC 4666.791114 6 0.0000 365 | 3/54
7 h-m-p 0.0000 0.0000 17313.8235 ++ 4646.967576 m 0.0000 422 | 4/54
8 h-m-p 0.0000 0.0000 2272.0847 ++ 4632.224427 m 0.0000 479 | 5/54
9 h-m-p 0.0000 0.0000 1183.8989 ++ 4629.685198 m 0.0000 536 | 6/54
10 h-m-p 0.0000 0.0000 1119.6574 ++ 4607.988897 m 0.0000 593 | 7/54
11 h-m-p 0.0000 0.0000 3203.9088 ++ 4594.267223 m 0.0000 650 | 8/54
12 h-m-p 0.0000 0.0000 9261.8972 ++ 4584.863772 m 0.0000 707 | 9/54
13 h-m-p 0.0000 0.0000 79767.9339 ++ 4567.771408 m 0.0000 764 | 10/54
14 h-m-p 0.0000 0.0000 14495.9435 ++ 4550.811412 m 0.0000 821 | 11/54
15 h-m-p 0.0000 0.0000 3541.3973 ++ 4535.103324 m 0.0000 878 | 12/54
16 h-m-p 0.0000 0.0000 1240.5658 ++ 4535.023192 m 0.0000 935 | 13/54
17 h-m-p 0.0000 0.0001 326.7996 ++ 4505.044565 m 0.0001 992 | 13/54
18 h-m-p 0.0000 0.0000 3816.7138 +YCYYCCC 4491.838626 6 0.0000 1059 | 13/54
19 h-m-p 0.0000 0.0000 1676.3171 +YYYYYCCCC 4488.271603 8 0.0000 1128 | 13/54
20 h-m-p 0.0000 0.0000 1676.8800 +YYYCCC 4485.411620 5 0.0000 1193 | 13/54
21 h-m-p 0.0000 0.0000 1932.3031 +YYYYCC 4478.986961 5 0.0000 1257 | 13/54
22 h-m-p 0.0000 0.0000 939.2342 +YYCYYCCC 4471.179420 7 0.0000 1325 | 13/54
23 h-m-p 0.0000 0.0000 2375.4826 YCCCC 4469.413739 4 0.0000 1389 | 13/54
24 h-m-p 0.0000 0.0001 406.1763 +YCYCCC 4466.322917 5 0.0000 1455 | 13/54
25 h-m-p 0.0000 0.0001 536.7164 +YCCC 4463.452027 3 0.0000 1518 | 13/54
26 h-m-p 0.0000 0.0000 638.5341 ++ 4461.026181 m 0.0000 1575 | 13/54
27 h-m-p -0.0000 -0.0000 745.8803
h-m-p: -0.00000000e+00 -0.00000000e+00 7.45880314e+02 4461.026181
.. | 13/54
28 h-m-p 0.0000 0.0000 237175.0278 --CYCYYCCC 4452.936775 7 0.0000 1699 | 13/54
29 h-m-p 0.0000 0.0000 4770.0899 CYYCCCCC 4442.338178 7 0.0000 1768 | 13/54
30 h-m-p 0.0000 0.0000 1303.2206 ++ 4410.345599 m 0.0000 1825 | 13/54
31 h-m-p 0.0000 0.0000 32313.4336 +CYYC 4397.355200 3 0.0000 1887 | 13/54
32 h-m-p 0.0000 0.0000 27471.1431 +CYCC 4394.829256 3 0.0000 1950 | 13/54
33 h-m-p 0.0000 0.0000 4655.3857 +YYYYYYC 4362.829133 6 0.0000 2014 | 13/54
34 h-m-p 0.0000 0.0000 6783.9878 ++ 4351.533595 m 0.0000 2071 | 13/54
35 h-m-p 0.0000 0.0000 7243.9545
h-m-p: 0.00000000e+00 0.00000000e+00 7.24395453e+03 4351.533595
.. | 13/54
36 h-m-p 0.0000 0.0000 2846.6364 YYYYYY 4343.801557 5 0.0000 2187 | 13/54
37 h-m-p 0.0000 0.0000 841.5328 +CYYC 4332.521391 3 0.0000 2250 | 13/54
38 h-m-p 0.0000 0.0000 3284.0080 +YYCYC 4324.848989 4 0.0000 2313 | 13/54
39 h-m-p 0.0000 0.0000 2040.5540 +YYYYCC 4314.074325 5 0.0000 2377 | 13/54
40 h-m-p 0.0000 0.0000 2142.7686 +YCYCCC 4311.198741 5 0.0000 2443 | 13/54
41 h-m-p 0.0000 0.0000 3265.9758 +YYCYC 4304.708805 4 0.0000 2506 | 13/54
42 h-m-p 0.0000 0.0001 3324.9777 +CYYC 4269.084223 3 0.0001 2569 | 13/54
43 h-m-p 0.0000 0.0000 12383.4594 +YCCC 4259.956209 3 0.0000 2632 | 13/54
44 h-m-p 0.0000 0.0001 977.7785 +YCCCC 4253.613354 4 0.0000 2697 | 13/54
45 h-m-p 0.0000 0.0001 1080.2797 YCCCC 4248.351352 4 0.0000 2761 | 13/54
46 h-m-p 0.0000 0.0000 748.6967 YCCCC 4246.809962 4 0.0000 2825 | 13/54
47 h-m-p 0.0000 0.0000 320.7880 YCCCC 4246.284973 4 0.0000 2889 | 13/54
48 h-m-p 0.0000 0.0002 185.5268 CCC 4245.950512 2 0.0000 2950 | 13/54
49 h-m-p 0.0000 0.0002 336.5726 +YCCC 4245.071136 3 0.0001 3013 | 13/54
50 h-m-p 0.0001 0.0003 160.1188 YYC 4244.809894 2 0.0000 3072 | 13/54
51 h-m-p 0.0000 0.0002 224.4412 CCC 4244.524926 2 0.0000 3133 | 13/54
52 h-m-p 0.0000 0.0002 256.6536 CCC 4244.239125 2 0.0000 3194 | 13/54
53 h-m-p 0.0000 0.0002 139.8566 CCC 4244.084394 2 0.0000 3255 | 13/54
54 h-m-p 0.0000 0.0002 105.0778 CYC 4244.005372 2 0.0000 3315 | 13/54
55 h-m-p 0.0001 0.0004 86.4913 YC 4243.968964 1 0.0000 3373 | 13/54
56 h-m-p 0.0000 0.0007 57.2552 CC 4243.931454 1 0.0001 3432 | 13/54
57 h-m-p 0.0000 0.0016 68.8861 CC 4243.889596 1 0.0001 3491 | 13/54
58 h-m-p 0.0001 0.0003 50.8810 YC 4243.875558 1 0.0000 3549 | 13/54
59 h-m-p 0.0000 0.0006 38.2050 CC 4243.860269 1 0.0001 3608 | 13/54
60 h-m-p 0.0000 0.0051 47.3692 +CC 4243.775061 1 0.0003 3668 | 13/54
61 h-m-p 0.0001 0.0007 129.1761 YC 4243.739924 1 0.0000 3726 | 13/54
62 h-m-p 0.0001 0.0006 47.2027 YCC 4243.716278 2 0.0001 3786 | 13/54
63 h-m-p 0.0001 0.0031 58.4796 YC 4243.664800 1 0.0002 3844 | 13/54
64 h-m-p 0.0001 0.0007 59.2642 C 4243.654054 0 0.0000 3901 | 13/54
65 h-m-p 0.0001 0.0007 13.3064 YC 4243.648707 1 0.0001 3959 | 13/54
66 h-m-p 0.0001 0.0144 21.0844 +CC 4243.629730 1 0.0003 4019 | 13/54
67 h-m-p 0.0001 0.0007 22.6412 YC 4243.624914 1 0.0001 4077 | 13/54
68 h-m-p 0.0001 0.0006 24.4181 +YC 4243.594094 1 0.0004 4136 | 13/54
69 h-m-p 0.0000 0.0018 207.0620 +CCC 4243.438925 2 0.0002 4198 | 13/54
70 h-m-p 0.0003 0.0142 132.2004 +CCC 4242.605826 2 0.0018 4260 | 13/54
71 h-m-p 0.0009 0.0052 252.3004 CCC 4241.430793 2 0.0013 4321 | 13/54
72 h-m-p 0.0029 0.0146 66.9361 YCC 4240.882837 2 0.0023 4381 | 13/54
73 h-m-p 0.0018 0.0216 88.8741 CC 4240.331831 1 0.0018 4440 | 13/54
74 h-m-p 0.0079 0.2570 19.8272 +YCCC 4236.974247 3 0.0526 4503 | 13/54
75 h-m-p 0.0026 0.0129 92.4235 YCCC 4236.584886 3 0.0012 4565 | 13/54
76 h-m-p 0.0218 0.1092 4.9362 ++ 4234.158005 m 0.1092 4622 | 13/54
77 h-m-p 0.1407 0.7037 0.7483 +YYYCCC 4229.265294 5 0.5089 4687 | 13/54
78 h-m-p 0.0995 0.4977 0.5612 YCC 4227.761367 2 0.1938 4788 | 13/54
79 h-m-p 0.1837 0.9186 0.1103 +YCCC 4226.041346 3 0.5066 4892 | 13/54
80 h-m-p 0.5375 4.4586 0.1040 YC 4225.377443 1 1.1477 4991 | 13/54
81 h-m-p 0.4969 2.4843 0.1591 YCCCC 4224.951243 4 0.9778 5096 | 13/54
82 h-m-p 0.6738 3.3692 0.0702 CCC 4224.862820 2 0.7924 5198 | 13/54
83 h-m-p 0.4830 7.4452 0.1152 CC 4224.799517 1 0.6283 5298 | 13/54
84 h-m-p 0.6591 6.8587 0.1098 YC 4224.752897 1 1.4938 5397 | 13/54
85 h-m-p 0.5515 2.7575 0.1527 +YC 4224.706812 1 1.4493 5497 | 13/54
86 h-m-p 0.2714 1.3568 0.1706 ++ 4224.660129 m 1.3568 5595 | 13/54
87 h-m-p -0.0000 -0.0000 0.1434
h-m-p: -0.00000000e+00 -0.00000000e+00 1.43360492e-01 4224.660129
.. | 13/54
88 h-m-p 0.0000 0.0004 62.2474 CC 4224.642016 1 0.0000 5790 | 13/54
89 h-m-p 0.0000 0.0006 24.0362 C 4224.635953 0 0.0000 5847 | 13/54
90 h-m-p 0.0000 0.0032 16.3668 CC 4224.631484 1 0.0000 5906 | 13/54
91 h-m-p 0.0000 0.0007 23.8440 YC 4224.629605 1 0.0000 5964 | 13/54
92 h-m-p 0.0000 0.0048 15.7190 YC 4224.626639 1 0.0001 6022 | 13/54
93 h-m-p 0.0001 0.0016 13.3239 YC 4224.624985 1 0.0000 6080 | 13/54
94 h-m-p 0.0000 0.0016 18.1529 YC 4224.623899 1 0.0000 6138 | 13/54
95 h-m-p 0.0000 0.0057 15.1622 CC 4224.622427 1 0.0000 6197 | 13/54
96 h-m-p 0.0000 0.0010 34.3277 C 4224.620936 0 0.0000 6254 | 13/54
97 h-m-p 0.0001 0.0045 11.1077 YC 4224.620009 1 0.0001 6312 | 13/54
98 h-m-p 0.0000 0.0009 16.9187 CC 4224.618688 1 0.0001 6371 | 13/54
99 h-m-p 0.0000 0.0003 29.9332 YC 4224.617929 1 0.0000 6429 | 13/54
100 h-m-p 0.0000 0.0003 19.0474 +YC 4224.615949 1 0.0001 6488 | 13/54
101 h-m-p 0.0001 0.0003 9.6274 YC 4224.615509 1 0.0000 6546 | 13/54
102 h-m-p 0.0000 0.0002 8.4961 Y 4224.615356 0 0.0000 6603 | 13/54
103 h-m-p 0.0000 0.0002 6.0347 Y 4224.615145 0 0.0000 6660 | 13/54
104 h-m-p 0.0000 0.0001 8.4382 ++ 4224.614490 m 0.0001 6717 | 14/54
105 h-m-p 0.0001 0.0055 6.8592 C 4224.614326 0 0.0000 6774 | 14/54
106 h-m-p 0.0000 0.0028 7.8495 YC 4224.614240 1 0.0000 6832 | 14/54
107 h-m-p 0.0000 0.0152 4.0662 YC 4224.614069 1 0.0001 6890 | 14/54
108 h-m-p 0.0001 0.0641 3.6412 C 4224.613843 0 0.0001 6947 | 14/54
109 h-m-p 0.0001 0.0054 7.0456 C 4224.613777 0 0.0000 7004 | 14/54
110 h-m-p 0.0001 0.0064 2.1694 C 4224.613766 0 0.0000 7061 | 14/54
111 h-m-p 0.0001 0.0564 1.1872 C 4224.613723 0 0.0001 7118 | 14/54
112 h-m-p 0.0004 0.1653 0.4665 C 4224.613716 0 0.0001 7175 | 14/54
113 h-m-p 0.0001 0.0429 1.3519 Y 4224.613704 0 0.0001 7272 | 14/54
114 h-m-p 0.0000 0.0088 5.3770 Y 4224.613683 0 0.0000 7329 | 14/54
115 h-m-p 0.0001 0.0216 2.6187 Y 4224.613671 0 0.0000 7386 | 14/54
116 h-m-p 0.0003 0.1306 2.3425 Y 4224.613552 0 0.0004 7443 | 14/54
117 h-m-p 0.0002 0.0140 4.2635 Y 4224.613531 0 0.0000 7500 | 14/54
118 h-m-p 0.0002 0.0873 4.7336 C 4224.613434 0 0.0002 7557 | 14/54
119 h-m-p 0.0001 0.0104 15.4294 C 4224.613352 0 0.0000 7614 | 14/54
120 h-m-p 0.0007 0.2630 1.0063 Y 4224.613226 0 0.0012 7671 | 14/54
121 h-m-p 0.0011 0.0303 1.1085 --C 4224.613223 0 0.0000 7730 | 14/54
122 h-m-p 0.0040 1.9970 0.7369 C 4224.612910 0 0.0052 7787 | 14/54
123 h-m-p 0.0054 1.3900 0.7109 C 4224.612823 0 0.0017 7884 | 14/54
124 h-m-p 0.0021 1.0275 0.8704 C 4224.612697 0 0.0022 7981 | 14/54
125 h-m-p 0.0036 1.7948 2.2471 C 4224.612062 0 0.0043 8078 | 14/54
126 h-m-p 0.0185 8.0000 0.5281 YC 4224.610899 1 0.0382 8136 | 14/54
127 h-m-p 0.0160 8.0000 1.6168 ++C 4224.586937 0 0.3005 8235 | 14/54
128 h-m-p 1.6000 8.0000 0.0106 -YC 4224.586605 1 0.1666 8294 | 14/54
129 h-m-p 0.1176 8.0000 0.0150 +CC 4224.586138 1 0.7325 8394 | 14/54
130 h-m-p 1.6000 8.0000 0.0003 Y 4224.586136 0 0.9473 8491 | 14/54
131 h-m-p 1.5331 8.0000 0.0002 -C 4224.586136 0 0.1292 8589 | 14/54
132 h-m-p 0.1244 8.0000 0.0002 ----C 4224.586136 0 0.0001 8690
Out..
lnL = -4224.586136
8691 lfun, 104292 eigenQcodon, 4684449 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -4237.708324 S = -4042.386239 -187.612442
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 299 patterns 1:52:48
did 20 / 299 patterns 1:52:48
did 30 / 299 patterns 1:52:48
did 40 / 299 patterns 1:52:48
did 50 / 299 patterns 1:52:49
did 60 / 299 patterns 1:52:49
did 70 / 299 patterns 1:52:49
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did 90 / 299 patterns 1:52:49
did 100 / 299 patterns 1:52:50
did 110 / 299 patterns 1:52:50
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did 130 / 299 patterns 1:52:50
did 140 / 299 patterns 1:52:50
did 150 / 299 patterns 1:52:51
did 160 / 299 patterns 1:52:51
did 170 / 299 patterns 1:52:51
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did 250 / 299 patterns 1:52:53
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did 270 / 299 patterns 1:52:53
did 280 / 299 patterns 1:52:53
did 290 / 299 patterns 1:52:53
did 299 / 299 patterns 1:52:53end of tree file.
Time used: 1:52:54
The loglikelihoods for models M1, M2, M7 and M8 are -4232.072048 -4232.072048 -4227.299939 -4224.586136 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
BtCoV_FO1A_F2_Hip_aba_GHA_2010_NA_ALK28785_1_2010_Ghana_Bat_Human_coronavirus_229E MATVNWADASEPQRGRQSRIPYSLYSPLLVDNDQPWKVIPRNLVPTNKKDKSKLIGYWNI
HCoV_229E_BN1_GER_2015_NA_AOG74787_1_2015_Germany_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNV
229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNV
0349_NA_AFR79254_1_2010_Netherlands_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNV
camel_Riyadh_Ry141_2015_N_YP_009194643_1_2015_03_Saudi_Arabia_Camel_Human_coronavirus_229E MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNI
HCoV_229E_Seattle_USA_SC379_2016_NA_ARK08624_1_2016_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNV
Camel229E_CoV_JC50_KSA_2014_NA_AOI28262_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E MATVNWADFSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNI
HCoV_229E_Seattle_USA_SC579_2016_NA_APT69853_1_2016_USA_Human_Human_coronavirus_229E MATVKWADAPEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNV
229E_UF_1_2016_NA_ARX11400_1_2016_11_23_USA_Unknown_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNV
HCoV_229E_Seattle_USA_SC9773_2016_NA_APT69891_1_2016_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNI
229E_N_AAG48597_1_NA_Thailand_Unknown_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNV
BtCoV_KW2E_F56_Hip_cf_rub_GHA_2011_NA_ALK28791_1_2011_Ghana_Bat_Human_coronavirus_229E MATVNWADESEQPRGRQARIPYSLYRPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNV
HCoV_229E_USA_UNM_0186_2016_N_QJY77951_1_2016_02_09_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNV
HCoV_229E_Seattle_USA_SC1212_2016_NA_APT69873_1_2016_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNV
CA08_1_2008_N_AFI49435_1_2008_USA_Camel_Human_coronavirus_229E MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNI
229E_Haiti_1_2016_NA_AST12968_1_2016_03_Haiti_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSDQPWKVIPRNLVPVNKKDKNKLIGYWNV
229E_human_USA_933_50_1993_N_AGT21349_1_1993_03_18_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNV
229E_human_USA_933_40_1993_N_AGT21371_1_1993_03_11_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQSRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNV
HCoV_229E_Seattle_USA_SC1143_2016_NA_APT69866_1_2016_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNV
HCoV_229E_Seattle_USA_SC0865_2019_NA_QEG03789_1_2019_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNV
HCoV_229E_Seattle_USA_SC3112_2015_NA_ARU07605_1_2015_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNV
Camel229E_CoV_KCSP1_KEN_2015_NA_AOG74793_1_2015_Kenya_Camel_Human_coronavirus_229E MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNI
HCoV_229E_Seattle_USA_SC677_2016_NA_APT69860_1_2016_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNV
HCoV_229E_Seattle_USA_SC9724_2018_NA_QEO75989_1_2018_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNV
HCoV_229E_Seattle_USA_SC9731_2016_NA_APT69880_1_2016_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNI
Camel229E_CoV_JC50_HUH7_KSA_2014_NA_AOI28294_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E MATVNWADFSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNI
BtKY229E_1_N_APD51503_1_2009_06_20_Kenya_Bat_Human_coronavirus_229E MASVNWADASEPQRGRSGRIPFSLYNPLLVENGQPWKVIPRDLVPTNKKEKDKLIGYWNV
Camel229E_CoV_AC04_KSA_2014_NA_AOI28287_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNI
Camel229E_CoV_JC52_KSA_2014_NA_AOI28279_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNI
BtCoV_AT1A_F1_Hip_aba_GHA_2010_NA_ALK28797_1_2010_Ghana_Bat_Human_coronavirus_229E MATVNWADESEQQRGRQGRIPYSVYSPLLVDSEQPWKVIPRNLVPINKKDKDKLIGYWNI
**:*:*** .* ***..***:*:* ****:. ********:*** ***:*.*******:
BtCoV_FO1A_F2_Hip_aba_GHA_2010_NA_ALK28785_1_2010_Ghana_Bat_Human_coronavirus_229E QKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRK
HCoV_229E_BN1_GER_2015_NA_AOG74787_1_2015_Germany_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
0349_NA_AFR79254_1_2010_Netherlands_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
camel_Riyadh_Ry141_2015_N_YP_009194643_1_2015_03_Saudi_Arabia_Camel_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRK
HCoV_229E_Seattle_USA_SC379_2016_NA_ARK08624_1_2016_USA_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
Camel229E_CoV_JC50_KSA_2014_NA_AOI28262_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRK
HCoV_229E_Seattle_USA_SC579_2016_NA_APT69853_1_2016_USA_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
229E_UF_1_2016_NA_ARX11400_1_2016_11_23_USA_Unknown_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
HCoV_229E_Seattle_USA_SC9773_2016_NA_APT69891_1_2016_USA_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
229E_N_AAG48597_1_NA_Thailand_Unknown_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
BtCoV_KW2E_F56_Hip_cf_rub_GHA_2011_NA_ALK28791_1_2011_Ghana_Bat_Human_coronavirus_229E QKRFRTRKGQRVDLPPKLHFYYLGTGPHQDAKFRDRREGVIWVAIDGAKTEPTGYGVRRR
HCoV_229E_USA_UNM_0186_2016_N_QJY77951_1_2016_02_09_USA_Human_Human_coronavirus_229E QRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
HCoV_229E_Seattle_USA_SC1212_2016_NA_APT69873_1_2016_USA_Human_Human_coronavirus_229E QRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
CA08_1_2008_N_AFI49435_1_2008_USA_Camel_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRK
229E_Haiti_1_2016_NA_AST12968_1_2016_03_Haiti_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
229E_human_USA_933_50_1993_N_AGT21349_1_1993_03_18_USA_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
229E_human_USA_933_40_1993_N_AGT21371_1_1993_03_11_USA_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
HCoV_229E_Seattle_USA_SC1143_2016_NA_APT69866_1_2016_USA_Human_Human_coronavirus_229E QRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
HCoV_229E_Seattle_USA_SC0865_2019_NA_QEG03789_1_2019_USA_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
HCoV_229E_Seattle_USA_SC3112_2015_NA_ARU07605_1_2015_USA_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
Camel229E_CoV_KCSP1_KEN_2015_NA_AOG74793_1_2015_Kenya_Camel_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRK
HCoV_229E_Seattle_USA_SC677_2016_NA_APT69860_1_2016_USA_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
HCoV_229E_Seattle_USA_SC9724_2018_NA_QEO75989_1_2018_USA_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
HCoV_229E_Seattle_USA_SC9731_2016_NA_APT69880_1_2016_USA_Human_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRK
Camel229E_CoV_JC50_HUH7_KSA_2014_NA_AOI28294_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRK
BtKY229E_1_N_APD51503_1_2009_06_20_Kenya_Bat_Human_coronavirus_229E QKRFRTKKGQRVDLPPKVHFYYLGTGPHKESKFRERIDGVVWVAVNGAKTEPTGYGVRRK
Camel229E_CoV_AC04_KSA_2014_NA_AOI28287_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRK
Camel229E_CoV_JC52_KSA_2014_NA_AOI28279_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E QKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRK
BtCoV_AT1A_F1_Hip_aba_GHA_2010_NA_ALK28797_1_2010_Ghana_Bat_Human_coronavirus_229E QKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRK
*:****:**:****.**:**********:::***:* :**:***::*************:
BtCoV_FO1A_F2_Hip_aba_GHA_2010_NA_ALK28785_1_2010_Ghana_Bat_Human_coronavirus_229E NSDPEEPRFSQALPNGVTVVEEPDSRAPSRSQSRSQSRGRGE-SKPQSRNSSSDRNQKSS
HCoV_229E_BN1_GER_2015_NA_AOG74787_1_2015_Germany_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NS
229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRGRGE-SKSQSRNPSSDRNH-NS
0349_NA_AFR79254_1_2010_Netherlands_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NS
camel_Riyadh_Ry141_2015_N_YP_009194643_1_2015_03_Saudi_Arabia_Camel_Human_coronavirus_229E NSDPEEPLFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-FKPQSRNSSS-----AS
HCoV_229E_Seattle_USA_SC379_2016_NA_ARK08624_1_2016_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRVE-SKSQSRNPSSDRNH-NS
Camel229E_CoV_JC50_KSA_2014_NA_AOI28262_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E NSDPEEPRFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-FKPQSRNSSS-----AS
HCoV_229E_Seattle_USA_SC579_2016_NA_APT69853_1_2016_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRVE-SKSQSRNPSSDRNH-NS
229E_UF_1_2016_NA_ARX11400_1_2016_11_23_USA_Unknown_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NS
HCoV_229E_Seattle_USA_SC9773_2016_NA_APT69891_1_2016_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NS
229E_N_AAG48597_1_NA_Thailand_Unknown_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRGRGE-SKPQSRNPSSDRNH-NS
BtCoV_KW2E_F56_Hip_cf_rub_GHA_2011_NA_ALK28791_1_2011_Ghana_Bat_Human_coronavirus_229E NADPEEPRFNQNLPSGVSIVEEPDSRGPSRSQSRSQSRGRGA-SKPQSRNTSTERSQGSN
HCoV_229E_USA_UNM_0186_2016_N_QJY77951_1_2016_02_09_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NS
HCoV_229E_Seattle_USA_SC1212_2016_NA_APT69873_1_2016_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NS
CA08_1_2008_N_AFI49435_1_2008_USA_Camel_Human_coronavirus_229E NLDPEEPRFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-FKPQSRNSSS-----AS
229E_Haiti_1_2016_NA_AST12968_1_2016_03_Haiti_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVADEPDSRAPSRSQSRSQSRSRVE-SKSQSRNPSSDRNH-NS
229E_human_USA_933_50_1993_N_AGT21349_1_1993_03_18_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRGRGE-SKSQSRNPSSDRNH-NS
229E_human_USA_933_40_1993_N_AGT21371_1_1993_03_11_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRGRGE-SKSQSRNPSSDRNH-NS
HCoV_229E_Seattle_USA_SC1143_2016_NA_APT69866_1_2016_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NS
HCoV_229E_Seattle_USA_SC0865_2019_NA_QEG03789_1_2019_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NS
HCoV_229E_Seattle_USA_SC3112_2015_NA_ARU07605_1_2015_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRVE-SKSQSRNPSSDRNH-NS
Camel229E_CoV_KCSP1_KEN_2015_NA_AOG74793_1_2015_Kenya_Camel_Human_coronavirus_229E NSDPEEPRFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-F----RNSSS-----AS
HCoV_229E_Seattle_USA_SC677_2016_NA_APT69860_1_2016_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRVE-SKSQSRNPSSDRNH-NS
HCoV_229E_Seattle_USA_SC9724_2018_NA_QEO75989_1_2018_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSR-------IQSRNPSSDRNH-NS
HCoV_229E_Seattle_USA_SC9731_2016_NA_APT69880_1_2016_USA_Human_Human_coronavirus_229E NSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NS
Camel229E_CoV_JC50_HUH7_KSA_2014_NA_AOI28294_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E NSDPEEPRFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-FKPQSRNSSS-----AS
BtKY229E_1_N_APD51503_1_2009_06_20_Kenya_Bat_Human_coronavirus_229E NADPETPKFNQKLPNGLSIVEDPDSRATSRSQSRSQSRDRGKNSKPQSRSSSTERP--QS
Camel229E_CoV_AC04_KSA_2014_NA_AOI28287_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E NSDPEEPRFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-FKPQSRNSSS-----AS
Camel229E_CoV_JC52_KSA_2014_NA_AOI28279_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E NSDPEEPRFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-FKPQSRNSSS-----AS
BtCoV_AT1A_F1_Hip_aba_GHA_2010_NA_ALK28797_1_2010_Ghana_Bat_Human_coronavirus_229E NLNPEEPRFSQALPNGVTVVEEPDSRAPSRSQSRSQSRGRGE-SKPQSRNSSSDRNQKSS
* :** * *.* **.*:::.::****..*****:**** *..*: .
BtCoV_FO1A_F2_Hip_aba_GHA_2010_NA_ALK28785_1_2010_Ghana_Bat_Human_coronavirus_229E QDDIMKAVAAALKSLGFEKPQEKENKVAKKGTPKPSRNQSPAPSQTRAKSPARSQSSETK
HCoV_229E_BN1_GER_2015_NA_AOG74787_1_2015_Germany_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
0349_NA_AFR79254_1_2010_Netherlands_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
camel_Riyadh_Ry141_2015_N_YP_009194643_1_2015_03_Saudi_Arabia_Camel_Human_coronavirus_229E QDDIIKAVAAALKSLGF----EKEKEAAKKGTPKPSRNQSPASFQTRAKSPARPQNSETK
HCoV_229E_Seattle_USA_SC379_2016_NA_ARK08624_1_2016_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETK
Camel229E_CoV_JC50_KSA_2014_NA_AOI28262_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E QDDIIKAVAAALKSLGF----EKEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETK
HCoV_229E_Seattle_USA_SC579_2016_NA_APT69853_1_2016_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
229E_UF_1_2016_NA_ARX11400_1_2016_11_23_USA_Unknown_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
HCoV_229E_Seattle_USA_SC9773_2016_NA_APT69891_1_2016_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
229E_N_AAG48597_1_NA_Thailand_Unknown_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQTSAKSLARSQSSETK
BtCoV_KW2E_F56_Hip_cf_rub_GHA_2011_NA_ALK28791_1_2011_Ghana_Bat_Human_coronavirus_229E QEDLLKAVAAALKSLGFEKPQEKDQKKGRKSTPKPSRSQSPVANQSRSKSPARSASSD-K
HCoV_229E_USA_UNM_0186_2016_N_QJY77951_1_2016_02_09_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
HCoV_229E_Seattle_USA_SC1212_2016_NA_APT69873_1_2016_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
CA08_1_2008_N_AFI49435_1_2008_USA_Camel_Human_coronavirus_229E QDDIIKAVAAALKSLGF----EKEKEAVKKGTPKPSRNQSPASSQTRAKSPARPQNSETK
229E_Haiti_1_2016_NA_AST12968_1_2016_03_Haiti_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
229E_human_USA_933_50_1993_N_AGT21349_1_1993_03_18_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
229E_human_USA_933_40_1993_N_AGT21371_1_1993_03_11_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
HCoV_229E_Seattle_USA_SC1143_2016_NA_APT69866_1_2016_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
HCoV_229E_Seattle_USA_SC0865_2019_NA_QEG03789_1_2019_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
HCoV_229E_Seattle_USA_SC3112_2015_NA_ARU07605_1_2015_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
Camel229E_CoV_KCSP1_KEN_2015_NA_AOG74793_1_2015_Kenya_Camel_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKEKKAAKKVTPKPSRNQSPASSQTCAKSPARPQNSETK
HCoV_229E_Seattle_USA_SC677_2016_NA_APT69860_1_2016_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETK
HCoV_229E_Seattle_USA_SC9724_2018_NA_QEO75989_1_2018_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
HCoV_229E_Seattle_USA_SC9731_2016_NA_APT69880_1_2016_USA_Human_Human_coronavirus_229E QDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETK
Camel229E_CoV_JC50_HUH7_KSA_2014_NA_AOI28294_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E QDDIIKAVAAALKSLGF----EKEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETK
BtKY229E_1_N_APD51503_1_2009_06_20_Kenya_Bat_Human_coronavirus_229E QDDIMKAVAAALKSLGFEKPQEPQQKK-KKATPKSSRSSSPAPVK------AQSSDAQSK
Camel229E_CoV_AC04_KSA_2014_NA_AOI28287_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E QDDIIKAVAAALKSLGF----EKEKEAAKKGTPKPSRNQSPASFQTRAKSPARPQNSETK
Camel229E_CoV_JC52_KSA_2014_NA_AOI28279_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E QDDIIKAVAAALKSLGF----EKEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETK
BtCoV_AT1A_F1_Hip_aba_GHA_2010_NA_ALK28797_1_2010_Ghana_Bat_Human_coronavirus_229E QDDILKAVAAALKSLGFD-PQEKAKKAAKKGTPKPSRNQSPVSSQTRAKSPARPQSSETK
*:*::************ * :: :. ***.**..**.. : *:. .:: *
BtCoV_FO1A_F2_Hip_aba_GHA_2010_NA_ALK28785_1_2010_Ghana_Bat_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
HCoV_229E_BN1_GER_2015_NA_AOG74787_1_2015_Germany_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
0349_NA_AFR79254_1_2010_Netherlands_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
camel_Riyadh_Ry141_2015_N_YP_009194643_1_2015_03_Saudi_Arabia_Camel_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGYPQFAELVPS
HCoV_229E_Seattle_USA_SC379_2016_NA_ARK08624_1_2016_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
Camel229E_CoV_JC50_KSA_2014_NA_AOI28262_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGYPQFAELVPS
HCoV_229E_Seattle_USA_SC579_2016_NA_APT69853_1_2016_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
229E_UF_1_2016_NA_ARX11400_1_2016_11_23_USA_Unknown_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
HCoV_229E_Seattle_USA_SC9773_2016_NA_APT69891_1_2016_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
229E_N_AAG48597_1_NA_Thailand_Unknown_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
BtCoV_KW2E_F56_Hip_cf_rub_GHA_2011_NA_ALK28791_1_2011_Ghana_Bat_Human_coronavirus_229E EQKHEMQKPRWKRQPNSDKTSNVTQCFGPRDFEHNFGNPELLANGVKAKGYPQFAELVPS
HCoV_229E_USA_UNM_0186_2016_N_QJY77951_1_2016_02_09_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
HCoV_229E_Seattle_USA_SC1212_2016_NA_APT69873_1_2016_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
CA08_1_2008_N_AFI49435_1_2008_USA_Camel_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGYPQFAELVPS
229E_Haiti_1_2016_NA_AST12968_1_2016_03_Haiti_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
229E_human_USA_933_50_1993_N_AGT21349_1_1993_03_18_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
229E_human_USA_933_40_1993_N_AGT21371_1_1993_03_11_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
HCoV_229E_Seattle_USA_SC1143_2016_NA_APT69866_1_2016_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
HCoV_229E_Seattle_USA_SC0865_2019_NA_QEG03789_1_2019_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
HCoV_229E_Seattle_USA_SC3112_2015_NA_ARU07605_1_2015_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
Camel229E_CoV_KCSP1_KEN_2015_NA_AOG74793_1_2015_Kenya_Camel_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLYHNFGSAGVVANGVKAKGYPQFAELVPS
HCoV_229E_Seattle_USA_SC677_2016_NA_APT69860_1_2016_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
HCoV_229E_Seattle_USA_SC9724_2018_NA_QEO75989_1_2018_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
HCoV_229E_Seattle_USA_SC9731_2016_NA_APT69880_1_2016_USA_Human_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPS
Camel229E_CoV_JC50_HUH7_KSA_2014_NA_AOI28294_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGYPQFAELVPS
BtKY229E_1_N_APD51503_1_2009_06_20_Kenya_Bat_Human_coronavirus_229E EQKHELQKPRWKRQPNSDKSSNVTQCFGPRDLEHNFGSADVVANGVKAKGYPQFAELVPS
Camel229E_CoV_AC04_KSA_2014_NA_AOI28287_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGYPQFAELVPS
Camel229E_CoV_JC52_KSA_2014_NA_AOI28279_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E EQKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGYPQFAELVPS
BtCoV_AT1A_F1_Hip_aba_GHA_2010_NA_ALK28797_1_2010_Ghana_Bat_Human_coronavirus_229E EQKHELQKPRWKRQPNSDVTSNVTQCFGPRDLDHNFGSADVVANGVKAKGYPQFAELVPS
*****:**********.* :*********** ****.. ::******************
BtCoV_FO1A_F2_Hip_aba_GHA_2010_NA_ALK28785_1_2010_Ghana_Bat_Human_coronavirus_229E TAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPSQVREMQQHPL
HCoV_229E_BN1_GER_2015_NA_AOG74787_1_2015_Germany_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
0349_NA_AFR79254_1_2010_Netherlands_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
camel_Riyadh_Ry141_2015_N_YP_009194643_1_2015_03_Saudi_Arabia_Camel_Human_coronavirus_229E TAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPLQ-GDMQQHPL
HCoV_229E_Seattle_USA_SC379_2016_NA_ARK08624_1_2016_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
Camel229E_CoV_JC50_KSA_2014_NA_AOI28262_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E TAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPLQ-GDMQQHPL
HCoV_229E_Seattle_USA_SC579_2016_NA_APT69853_1_2016_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
229E_UF_1_2016_NA_ARX11400_1_2016_11_23_USA_Unknown_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
HCoV_229E_Seattle_USA_SC9773_2016_NA_APT69891_1_2016_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
229E_N_AAG48597_1_NA_Thailand_Unknown_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQHPL
BtCoV_KW2E_F56_Hip_cf_rub_GHA_2011_NA_ALK28791_1_2011_Ghana_Bat_Human_coronavirus_229E TAAMLFDSHIDTKEEGESVVLTYTTRVKVPKDHPNLGKFLDQLNAFTKPSSVKETQSHP-
HCoV_229E_USA_UNM_0186_2016_N_QJY77951_1_2016_02_09_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
HCoV_229E_Seattle_USA_SC1212_2016_NA_APT69873_1_2016_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
CA08_1_2008_N_AFI49435_1_2008_USA_Camel_Human_coronavirus_229E TAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPSQ-GDMQQHPL
229E_Haiti_1_2016_NA_AST12968_1_2016_03_Haiti_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
229E_human_USA_933_50_1993_N_AGT21349_1_1993_03_18_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
229E_human_USA_933_40_1993_N_AGT21371_1_1993_03_11_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
HCoV_229E_Seattle_USA_SC1143_2016_NA_APT69866_1_2016_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
HCoV_229E_Seattle_USA_SC0865_2019_NA_QEG03789_1_2019_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
HCoV_229E_Seattle_USA_SC3112_2015_NA_ARU07605_1_2015_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
Camel229E_CoV_KCSP1_KEN_2015_NA_AOG74793_1_2015_Kenya_Camel_Human_coronavirus_229E TAAMLFDSHIDFNESGNNVVLIYTTRVTVPKDHPHLGKFLEELNAFTKPSQ-GEMQQHPL
HCoV_229E_Seattle_USA_SC677_2016_NA_APT69860_1_2016_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
HCoV_229E_Seattle_USA_SC9724_2018_NA_QEO75989_1_2018_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
HCoV_229E_Seattle_USA_SC9731_2016_NA_APT69880_1_2016_USA_Human_Human_coronavirus_229E TAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPL
Camel229E_CoV_JC50_HUH7_KSA_2014_NA_AOI28294_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E TAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPLQ-GDMQQHPL
BtKY229E_1_N_APD51503_1_2009_06_20_Kenya_Bat_Human_coronavirus_229E TAAVLFDSHIDSKEAGDSVLLTFTTRVKVPKDHPHLGKFLEEINAFTKPSQVKETQQHPL
Camel229E_CoV_AC04_KSA_2014_NA_AOI28287_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E TAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPLQ-GDMQQHPL
Camel229E_CoV_JC52_KSA_2014_NA_AOI28279_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E TAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPLQ-GDMQQHPL
BtCoV_AT1A_F1_Hip_aba_GHA_2010_NA_ALK28797_1_2010_Ghana_Bat_Human_coronavirus_229E TAAMLFDSHIDSKESGNNVVLTFTTRVTVPKDHPHLGKFLEEINAFTKPSQVREMQQHPL
***:****** :* *:.*:* :****.******:*****:::**** : *.:*
BtCoV_FO1A_F2_Hip_aba_GHA_2010_NA_ALK28785_1_2010_Ghana_Bat_Human_coronavirus_229E LNPSAQEFNPSQTSPATVEPVYDEVAIETDIIDEVN
HCoV_229E_BN1_GER_2015_NA_AOG74787_1_2015_Germany_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
0349_NA_AFR79254_1_2010_Netherlands_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
camel_Riyadh_Ry141_2015_N_YP_009194643_1_2015_03_Saudi_Arabia_Camel_Human_coronavirus_229E LNPSAQEL---QTSPGTAEPVYDAVSIETDIIDEVN
HCoV_229E_Seattle_USA_SC379_2016_NA_ARK08624_1_2016_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
Camel229E_CoV_JC50_KSA_2014_NA_AOI28262_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E LNPSAQEL---QTSPGTAEPVYDAVSIETDIIDEVN
HCoV_229E_Seattle_USA_SC579_2016_NA_APT69853_1_2016_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
229E_UF_1_2016_NA_ARX11400_1_2016_11_23_USA_Unknown_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
HCoV_229E_Seattle_USA_SC9773_2016_NA_APT69891_1_2016_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
229E_N_AAG48597_1_NA_Thailand_Unknown_Human_coronavirus_229E LNPSALEFNPSQTSPATAEPVRDEVSIETDIIDEVN
BtCoV_KW2E_F56_Hip_cf_rub_GHA_2011_NA_ALK28791_1_2011_Ghana_Bat_Human_coronavirus_229E MNPAAPEFSP--IVPSNPEPIYDAVAMETDIIDEVN
HCoV_229E_USA_UNM_0186_2016_N_QJY77951_1_2016_02_09_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
HCoV_229E_Seattle_USA_SC1212_2016_NA_APT69873_1_2016_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
CA08_1_2008_N_AFI49435_1_2008_USA_Camel_Human_coronavirus_229E LNPSAQEFNPSQTSPGTVEPVYDAVSIETDIIDEVN
229E_Haiti_1_2016_NA_AST12968_1_2016_03_Haiti_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
229E_human_USA_933_50_1993_N_AGT21349_1_1993_03_18_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
229E_human_USA_933_40_1993_N_AGT21371_1_1993_03_11_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
HCoV_229E_Seattle_USA_SC1143_2016_NA_APT69866_1_2016_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
HCoV_229E_Seattle_USA_SC0865_2019_NA_QEG03789_1_2019_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
HCoV_229E_Seattle_USA_SC3112_2015_NA_ARU07605_1_2015_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
Camel229E_CoV_KCSP1_KEN_2015_NA_AOG74793_1_2015_Kenya_Camel_Human_coronavirus_229E LNPSAQEFNSLQTLPGTVESVYDAVAIETDIIDEVN
HCoV_229E_Seattle_USA_SC677_2016_NA_APT69860_1_2016_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
HCoV_229E_Seattle_USA_SC9724_2018_NA_QEO75989_1_2018_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
HCoV_229E_Seattle_USA_SC9731_2016_NA_APT69880_1_2016_USA_Human_Human_coronavirus_229E LNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN
Camel229E_CoV_JC50_HUH7_KSA_2014_NA_AOI28294_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E LNPSAQEL---QTSPGTAEPVYDAVSIETDIIDEVN
BtKY229E_1_N_APD51503_1_2009_06_20_Kenya_Bat_Human_coronavirus_229E LNPAAQDFTPS-TSSSTVEPVYDEVALETDIIDEVN
Camel229E_CoV_AC04_KSA_2014_NA_AOI28287_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E LNPSAQEL---QTSPGTAEPVYDAVSIETDIIDEVN
Camel229E_CoV_JC52_KSA_2014_NA_AOI28279_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E LNPSAQEL---QTSPGTAEPVYDAVSIETDIIDEVN
BtCoV_AT1A_F1_Hip_aba_GHA_2010_NA_ALK28797_1_2010_Ghana_Bat_Human_coronavirus_229E LNPSAQEFNPSQTSPAPAEPVYDEVAIETDIIDEVN
:**:* :: .. *.: * *::*********
>BtCoV_FO1A_F2_Hip_aba_GHA_2010_NA_ALK28785_1_2010_Ghana_Bat_Human_coronavirus_229E ATGGCTACAGTCAACTGGGCTGATGCCTCTGAACCACAACGTGGTCGTCAGAGTAGAATACCTTATTCCCTTTATAGCCCTTTGCTTGTTGACAATGATCAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCACCAACAAGAAAGACAAAAGCAAGCTTATAGGCTATTGGAATATTCAAAAACGTTTCAGAACGAGAAAGGGCAAACGGGTTGATTTACCACCTAAGTTGCACTTCTATTATCTTGGCACAGGACCTCATAAAGATGCTAAATTCAGAGAGCGCATT------GAAGGTGTCGTATGGGTTGCTGTTGATGGTGCTAAAACCGAACCTACGGGTTATGGTGTTAGGCGTAAGAATTCAGACCCAGAAGAACCACGTTTCAGTCAAGCGCTCCCAAATGGTGTCACTGTTGTTGAAGAACCTGACTCTCGTGCTCCTTCTCGTTCACAGTCAAGGTCACAGAGCCGAGGTCGTGGTGAA---TCCAAGCCCCAGTCTCGAAATTCTTCAAGTGACAGA---------------AACCAGAAGTCAAGTCAGGACGACATCATGAAGGCAGTTGCTGCTGCTCTTAAATCTTTAGGTTTTGAGAAGCCTCAAGAA------AAAGAGAATAAGGTAGCGAAAAAGGGTACTCCTAAGCCTTCTAGGAACCAGAGTCCTGCTCCGTCTCAAACTCGTGCCAAGAGCCCAGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAACATGAAATGCAAAAACCACGGTGGAAAAGACAGCCTAATGATGATGTGACATCCAATGTCACACAATGTTTTGGCCCCAGAGATCTTGACCACAACTTTGGAAGTGCAGGTGTTGTAGCTAATGGTGTTAAAGCCAAAGGCTATCCTCAATTTGCTGAACTTGTGCCTTCTACAGCTGCTATGCTGTTTGATAGTCACATTGACTCTAAGGAGTCGGGCAACAATGTTGTCCTTACTTACACAACTAGGGTTACAGTGCCCAAGGACCATCCTCATTTGGGTAAGTTCTTGGAGGAGTTAAATGCATTCACCAAGCCTTCACAGGTTAGAGAAATGCAACAACATCCTCTG---------CTTAACCCTAGTGCACAAGAATTCAATCCATCACAAACTTCACCTGCAACTGTTGAACCAGTCTACGATGAAGTTGCTATTGAAACTGACATAATTGATGAAGTCAAC >HCoV_229E_BN1_GER_2015_NA_AOG74787_1_2015_Germany_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTACTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCAAAGTTACATTTTTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGGTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTTTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAT >229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTATTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCATCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTTTATTATCTTGGCACAGGACCCCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTCGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCGCAGAGTCGCGGTCGTGGTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACTCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >0349_NA_AFR79254_1_2010_Netherlands_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTACTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCATCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTTTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGGTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCATTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >camel_Riyadh_Ry141_2015_N_YP_009194643_1_2015_03_Saudi_Arabia_Camel_Human_coronavirus_229E ATGGCTACAGTCAACTGGGCTGATTCCTCTGAACCACAACGTGGTCGTCAGGGCAGAATACCTTATTCCCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCACCAACAAGAAAGATAAAAGCAAGCTTATAGGCTATTGGAATATTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTTGACTTGTCACCTAAGTTGCATTTCTATTATCTTGGCACAGGACCCCACAAAGATGCTAAATTCAGAGAGCGCATT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACCGAACCTACTGGTTATGGTGTTAGGCGCAAGAATTCAGATCCAGAAGAACCACTCTTCAGTCAAAGTCTTCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCTCGTGCTCCTTCGCGTTCTCAGTCAAAGTCACAGAGCCGAGGTCGTGGTGAA---TTTAAACCTCAGTCGCGCAATTCTTCAAGT------------------------------GCAAGTCAGGACGACATTATTAAGGCAGTAGCTGCTGCTCTTAAATCTTTAGGTTTT------------GAA------AAAGAGAAAGAGGCAGCGAAAAAGGGTACTCCTAAGCCTTCTAGAAATCAGAGTCCTGCTTCTTTTCAGACTCGTGCCAAGAGCCCTGCTCGTCCTCAGAATTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAACCACGGTGGAAAAGACAGCCTAATGATGATTTGACATCTAATGTTACACAGTGTTTTGGCCCCAGAGATCCTTACCACAACTTTGGAAGTGCAGGTGTTGTAGCTAATGGTGTCAAAGCCAAAGGCTACCCACAATTTGCTGAACTTGTGCCTTCTACAGCTGCCATGCTGTTTGACAGTCACATTGACTCTAAGGAGTCTGGCAATAATGTTGTTCTTACTTACACAACTAGGGTTACAGTGCCCAAGGACCACCCGCATTTGGGCAAGTTCTTAGAGGAGTTAAATGCATTCACTAAGCCTCTACAA---GGAGACATGCAACAACACCCTCTT---------CTTAACCCTAGTGCACAAGAATTA---------CAAACTTCACCTGGAACTGCTGAACCAGTCTACGATGCAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >HCoV_229E_Seattle_USA_SC379_2016_NA_ARK08624_1_2016_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTACTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTCTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGTTGAA---TCCAAATCTCAATCTCGTAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTGCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >Camel229E_CoV_JC50_KSA_2014_NA_AOI28262_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E ATGGCTACAGTCAACTGGGCTGATTTCTCTGAACCACAACGTGGTCGTCAGGGCAGAATACCTTATTCCCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCACCAACAAGAAAGATAAAAGCAAGCTTATAGGCTATTGGAATATTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTTGACTTGTCACCTAAGTTGCACTTCTATTATCTTGGCACAGGACCCCACAAAGATGCTAAATTCAGAGAGCGCATT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACCGAACCTACTGGTTATGGTGTTAGGCGCAAGAATTCAGATCCAGAAGAACCACGCTTCAGTCAAAGTCTTCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCTCGTGCTCCTTCGCGTTCTCAGTCAAAGTCACAGAGCCGAGGTCGTGGTGAA---TTTAAACCTCAGTCGCGCAATTCTTCAAGT------------------------------GCAAGTCAGGACGACATTATTAAGGCAGTAGCTGCTGCTCTTAAATCTTTAGGTTTT------------GAA------AAAGAGAAAGAGGCAGCGAAAAAGGGTACTCCTAAGCCTTCTAGAAATCAGAGTCCTGCTTCTTTTCAGATTCGTGCCAAGAGCCCTGCTCGTCCTCAGAATTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAACCACGGTGGAAAAGACAGCCTAATGATGATTTGACATCTAATGTTACACAGTGTTTTGGCCCCAGAGATCCTTACCACAACTTTGGAAGTGCAGGTGTTGTAGCTAATGGTGTCAAAGCCAAAGGCTACCCACAATTTGCTGAACTTGTGCCTTCTACAGCTGCCATGCTGTTTGACAGTCACATTGACTCTAAGGAGTCTGGCAATAATGTTGTTCTTACTTACACAACTAGGGTTACAGTGCCCAAGGACCACCCGCATTTGGGCAAGTTCTTAGAGGAGTTAAATGCATTCACTAAGCCTCTACAA---GGAGACATGCAACAACACCCTCTT---------CTTAACCCTAGTGCACAAGAATTA---------CAAACTTCACCTGGAACTGCTGAACCAGTCTACGATGCAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >HCoV_229E_Seattle_USA_SC579_2016_NA_APT69853_1_2016_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCACCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTACTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTCTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGTTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >229E_UF_1_2016_NA_ARX11400_1_2016_11_23_USA_Unknown_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTACTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCAAAGTTACATTTTTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGGTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCATTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >HCoV_229E_Seattle_USA_SC9773_2016_NA_APT69891_1_2016_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTATTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTTATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATATTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTTTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGGTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >229E_N_AAG48597_1_NA_Thailand_Unknown_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTATTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCATCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGCTGCATTTTTATTATCTTGGCACAGGACCCCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTCGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCCCGTGCTCCTTCCCGGTCTCAGTCGAGGTCGCAGAGTCGCGGTCGTGGTGAA---TCCAAACCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTTGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGATAAAAAGTCAGCGAAAACGGGTACTCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAAACTTCTGCCAAGAGTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAATGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCAACAGCTGCTATGCTGTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACTACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAGTTAAATGCATTCACT---------------AGAGAAATGCAACAACATCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCTCAAACTTCACCTGCAACTGCTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTAAAC >BtCoV_KW2E_F56_Hip_cf_rub_GHA_2011_NA_ALK28791_1_2011_Ghana_Bat_Human_coronavirus_229E ATGGCTACGGTCAATTGGGCTGATGAGTCTGAGCAGCCGCGTGGTCGTCAGGCTAGAATCCCTTATTCTCTTTATAGGCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCACGTAATTTGGTACCCACCAACAAGAAAGATAAAAGCAAGCTAATTGGCTATTGGAATGTTCAAAAACGCTTCAGAACTCGTAAAGGGCAGCGTGTTGATTTGCCACCTAAGCTGCACTTTTATTATTTGGGCACAGGACCGCATCAAGATGCCAAGTTCAGAGACCGTCGC------GAGGGTGTGATCTGGGTCGCTATTGATGGTGCCAAAACCGAACCTACGGGATACGGTGTGAGGCGCAGGAATGCCGACCCAGAGGAACCTCGTTTCAACCAGAACTTGCCAAGTGGTGTTTCTATTGTTGAAGAACCTGACTCTCGCGGTCCATCCCGTTCTCAGTCACGGTCGCAGAGTCGCGGACGAGGTGCT---TCTAAACCTCAGTCTAGAAACACTTCCACTGAGCGC---------------TCTCAGGGTTCAAATCAGGAAGACCTCTTGAAGGCTGTTGCTGCTGCTCTTAAGTCCTTAGGTTTTGAAAAACCACAGGAA------AAAGATCAAAAGAAAGGCAGAAAATCAACGCCGAAGCCTTCTAGGAGTCAGAGCCCTGTTGCCAATCAGAGTCGCTCTAAGAGTCCTGCTCGGTCTGCGAGTTCTGAC---AAGGAACAAAAACATGAGATGCAGAAGCCGCGCTGGAAGCGCCAGCCTAATAGTGACAAGACATCTAATGTCACACAGTGCTTTGGGCCTCGTGACTTTGAACACAATTTCGGCAATCCTGAGTTGTTAGCTAATGGTGTTAAAGCCAAAGGTTACCCTCAGTTTGCTGAACTTGTCCCATCCACAGCTGCAATGCTGTTTGATAGTCACATTGACACCAAAGAAGAAGGTGAGTCAGTTGTTTTAACGTACACAACTCGTGTGAAAGTCCCCAAAGACCACCCCAATTTGGGTAAGTTTTTGGATCAGTTAAATGCTTTCACAAAACCTTCCAGTGTTAAGGAAACCCAATCTCATCCC------------ATGAACCCTGCTGCTCCAGAGTTTAGTCCA------ATTGTGCCATCTAACCCTGAGCCTATTTATGATGCTGTGGCTATGGAGACTGATATAATTGATGAAGTCAAT >HCoV_229E_USA_UNM_0186_2016_N_QJY77951_1_2016_02_09_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTACTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAGACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTTTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGAAGAACCTGACTCCCGCGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGGTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACTCCTAAGCCCTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGCGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >HCoV_229E_Seattle_USA_SC1212_2016_NA_APT69873_1_2016_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTACTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAGACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTTTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGAAGAACCGGACTCCCGCGCTCCTTCTCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGGTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCCTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGCGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >CA08_1_2008_N_AFI49435_1_2008_USA_Camel_Human_coronavirus_229E ATGGCTACAGTCAACTGGGCTGATTCCTCTGAACCACAACGTGGTCGTCAGGGCAGAATACCTTATTCCCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCACCAACAAGAAAGATAAAAGCAAGCTTATAGGCTATTGGAATATTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTTGACTTGTCACCTAAGTTGCACTTCTATTATCTTGGCACAGGACCCCATAAAGATGCTAAATTCAGAGAGCGCATT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACCGAACCTACTGGTTATGGTGTTAGGCGCAAGAATTTAGATCCAGAAGAACCACGCTTCAGTCAAAGTCTTCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCTCGTGCTCCTTCGCGTTCTCAGTCAAAGTCACAGAGCCGAGGTCGTGGTGAA---TTTAAACCTCAGTCGCGCAATTCTTCAAGT------------------------------GCAAGTCAGGACGACATTATTAAGGCAGTAGCTGCTGCTCTTAAATCTTTAGGTTTT------------GAA------AAAGAGAAAGAGGCAGTGAAAAAGGGTACTCCTAAGCCTTCTAGAAATCAGAGTCCTGCTTCTTCTCAGACTCGTGCCAAGAGCCCTGCTCGTCCTCAGAATTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAACCACGGTGGAAAAGACAGCCTAATGATGATGTGACATCTAATGTTACACAGTGTTTTGGCCCCAGAGATCCTTACCACAACTTTGGAAGTGCAGGTGTTGTAGCTAATGGTGTCAAAGCCAAAGGCTACCCACAATTTGCTGAACTTGTGCCTTCTACAGCTGCCATGCTGTTTGACAGTCACATTGACTCTAAGGAGTCTGGCAATAATGTTGTTCTTACTTACACAACTAGGGTTACAGTGCCCAAGGATCACCCGCATTTGGGCAAGTTCTTAGAGGAGTTAAATGCATTCACTAAGCCTTCACAA---GGAGACATGCAACAACACCCTCTT---------CTTAACCCTAGTGCACAAGAATTCAATCCATCACAAACTTCACCTGGAACTGTTGAACCAGTCTACGATGCAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >229E_Haiti_1_2016_NA_AST12968_1_2016_03_Haiti_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTATTCTCTTTATAGCCCTTTGCTTGTTGATAGTGACCAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTTTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGATGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGTTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >229E_human_USA_933_50_1993_N_AGT21349_1_1993_03_18_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTATTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCATCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTTTATTATCTTGGCACAGGACCCCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTCGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCGCAGAGTCGCGGTCGTGGTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACTCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGGGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTAAAC >229E_human_USA_933_40_1993_N_AGT21371_1_1993_03_11_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGAGTAGAATACCTTATTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCATCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTTTATTATCTTGGCACAGGACCCCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTCGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCGCAGAGTCGCGGTCGTGGTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACTCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >HCoV_229E_Seattle_USA_SC1143_2016_NA_APT69866_1_2016_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTACTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAGACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTTTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGAAGAACCGGACTCCCGCGCTCCTTCTCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGGTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCCTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGCGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >HCoV_229E_Seattle_USA_SC0865_2019_NA_QEG03789_1_2019_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTATTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTTTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACGGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGTAGTCGTGGTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTACCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACTACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >HCoV_229E_Seattle_USA_SC3112_2015_NA_ARU07605_1_2015_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTACTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTCTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGTTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >Camel229E_CoV_KCSP1_KEN_2015_NA_AOG74793_1_2015_Kenya_Camel_Human_coronavirus_229E ATGGCTACAGTCAACTGGGCTGATTCCTCTGAGCCACAACGTGGTCGTCAGGGTAGAATACCTTATTCCCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCACCAACAAGAAAGATAAAAGCAAGCTTATAGGCTATTGGAATATTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTTGACTTGTCACCTAAGTTGCACTTTTATTATCTTGGCACAGGACCCCATAAAGATGCTAAATTCAGAGAGCGCATT------GAAGGTGTTGTCTGGGTTGCTGTTGACGGTGCTAAAACCGAACCTACTGGTTATGGTGTTAGGCGCAAGAATTCAGATCCAGAAGAACCACGCTTCAGTCAAAGTCTTCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCTCGTGCTCCTTCTCGTTCTCAGTCAAAGTCACAGAGCCGAGGTCGTGGTGAA---TTT------------CGCAATTCTTCAAGT------------------------------GCAAGTCAGGACGACATCATGAAGGCAGTAGCTGCTGCTCTTAAATCTTTAGGTTTTGATAAGCCTCAGGAA------AAAGAGAAAAAGGCAGCGAAAAAGGTTACTCCTAAGCCTTCTAGAAATCAGAGTCCTGCTTCTTCTCAGACTTGTGCCAAGAGCCCTGCTCGTCCTCAGAATTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAACCACGGTGGAAAAGACAGCCTAATGATGATGTGACATCTAATGTTACACAGTGTTTTGGCCCCAGAGACCTTTACCACAACTTTGGAAGTGCAGGTGTTGTAGCTAATGGTGTCAAAGCCAAAGGCTACCCACAATTTGCTGAACTTGTGCCTTCCACAGCTGCTATGCTGTTTGATAGTCACATTGACTTTAATGAGTCTGGCAATAATGTTGTCCTTATTTACACAACTAGGGTTACAGTGCCCAAGGACCACCCTCATTTGGGCAAGTTTTTAGAGGAGTTAAATGCATTCACTAAGCCTTCACAA---GGAGAAATGCAACAACATCCTCTT---------CTTAACCCTAGTGCACAAGAATTCAATTCATTACAAACTTTACCTGGAACTGTTGAATCAGTTTACGATGCAGTTGCTATTGAAACTGACATAATTGATGAAGTCAAC >HCoV_229E_Seattle_USA_SC677_2016_NA_APT69860_1_2016_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTACTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTCTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGTTGAA---TCCAAATCTCAATCTCGTAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTGCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >HCoV_229E_Seattle_USA_SC9724_2018_NA_QEO75989_1_2018_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTATTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATGTTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTTTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGT---------------------ATTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCTGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCTTCTCGTAATCAGAGTCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTACCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >HCoV_229E_Seattle_USA_SC9731_2016_NA_APT69880_1_2016_USA_Human_Human_coronavirus_229E ATGGCTACAGTCAAATGGGCTGATGCATCTGAACCACAACGTGGTCGTCAGGGTAGAATACCTTATTCTCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTTATACCTCGTAATTTGGTACCCGTCAACAAGAAAGACAAAAATAAGCTTATAGGCTATTGGAATATTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTGGATTTGTCACCCAAGTTACATTTTTATTATCTTGGCACAGGACCTCATAAAGATGCAAAATTTAGAGAGCGTGTT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACTGAACCTACAGGTTACGGTGTTAGGCGCAAGAATTCAGAACCAGAGATACCACACTTCAATCAAAAGCTCCCAAATGGTGTTACTGTTGCTGAAGAACCTGACTCCCGTGCTCCTTCCCGTTCTCAGTCAAGGTCTCAGAGTCGCAGTCGTGGTGAA---TCCAAATCTCAATCTCGGAATCCTTCAAGTGACAGA---------------AACCAT---AACAGTCAGGATGACATCATGAAGGCAGTCGCGGCGGCTCTTAAATCTTTAGGTTTTGACAAGCCTCAGGAA------AAAGACAAAAAGTCAGCGAAAACGGGTACCCCTAAGCCTTCTCGTAATCAGAGCCCTGCTTCTTCTCAATCTGCTGCCAAGATTCTTGCTCGTTCTCAGAGTTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAGCCACGGTGGAAAAGACAGCCTAACGATGATGTGACATCTAATGTCACACAATGTTTTGGCCCCAGAGACCTTGACCACAACTTTGGAAGTGCAGGTGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCTACAGCTGCTATGCTTTTTGATAGTCACATTGTTTCCAAAGAGTCAGGCAACACTGTGGTCTTGACTTTCACCACTAGAGTGACTGTGCCCAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAATTAAATGCATTCACT---------------AGAGAAATGCAACAACAGCCTCTT---------CTTAACCCTAGTGCACTAGAATTCAACCCATCCCAAACTTCACCTGCAACTGTTGAACCAGTGCGTGATGAAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >Camel229E_CoV_JC50_HUH7_KSA_2014_NA_AOI28294_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E ATGGCTACAGTCAACTGGGCTGATTTCTCTGAACCACAACGTGGTCGTCAGGGCAGAATACCTTATTCCCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCACCAACAAGAAAGATAAAAGCAAGCTTATAGGCTATTGGAATATTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTTGACTTGTCACCTAAGTTGCACTTCTATTATCTTGGCACAGGACCCCACAAAGATGCTAAATTCAGAGAGCGCATT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACCGAACCTACTGGTTATGGTGTTAGGCGCAAGAATTCAGATCCAGAAGAACCACGCTTCAGTCAAAGTCTTCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCTCGTGCTCCTTCGCGTTCTCAGTCAAAGTCACAGAGCCGAGGTCGTGGTGAA---TTTAAACCTCAGTCGCGCAATTCTTCAAGT------------------------------GCAAGTCAGGACGACATTATTAAGGCAGTAGCTGCTGCTCTTAAATCTTTAGGTTTT------------GAA------AAAGAGAAAGAGGCAGCGAAAAAGGGTACTCCTAAGCCTTCTAGAAATCAGAGTCCTGCTTCTTTTCAGATTCGTGCCAAGAGCCCTGCTCGTCCTCAGAATTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAACCACGGTGGAAAAGACAGCCTAATGATGATTTGACATCTAATGTTACACAGTGTTTTGGCCCCAGAGATCCTTACCACAACTTTGGAAGTGCAGGTGTTGTAGCTAATGGTGTCAAAGCCAAAGGCTACCCACAATTTGCTGAACTTGTGCCTTCTACAGCTGCCATGCTGTTTGACAGTCACATTGACTCTAAGGAGTCTGGCAATAATGTTGTTCTTACTTACACAACTAGGGTTACAGTGCCCAAGGACCACCCGCATTTGGGCAAGTTCTTAGAGGAGTTAAATGCATTCACTAAGCCTCTACAA---GGAGACATGCAACAACACCCTCTT---------CTTAACCCTAGTGCACAAGAATTA---------CAAACTTCACCTGGAACTGCTGAACCAGTCTACGATGCAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >BtKY229E_1_N_APD51503_1_2009_06_20_Kenya_Bat_Human_coronavirus_229E ATGGCTTCAGTTAATTGGGCTGATGCGTCTGAACCACAACGTGGTCGTTCAGGCAGAATCCCTTTTTCTCTTTATAACCCCTTGCTTGTCGAAAATGGCCAACCTTGGAAAGTGATACCACGTGATTTGGTACCTACTAACAAGAAGGAAAAAGACAAGCTTATTGGGTATTGGAATGTACAAAAACGCTTCAGAACTAAGAAAGGTCAGAGAGTGGACCTACCTCCCAAGGTACATTTTTACTATTTGGGCACAGGACCACATAAGGAATCAAAATTCAGAGAACGCATT------GATGGTGTGGTCTGGGTTGCAGTTAATGGTGCTAAAACAGAACCAACTGGTTATGGTGTTCGCCGTAAAAATGCTGATCCAGAAACACCTAAATTTAATCAGAAGCTTCCAAATGGCCTTTCTATTGTTGAAGATCCAGATTCACGTGCCACTTCTAGGTCCCAGTCACGTTCTCAGAGTAGAGATCGTGGTAAAAATTCTAAACCTCAGTCACGTAGTTCCTCAACAGAACGC---------------CCT------CAGAGTCAGGATGACATCATGAAAGCTGTTGCTGCTGCGTTGAAATCCTTGGGTTTTGAAAAACCTCAAGAA------CCTCAACAGAAGAAA---AAGAAGGCTACACCTAAGTCTTCTAGAAGTTCGAGTCCTGCTCCAGTTAAA------------------GCACAAAGTTCTGATGCTCAAAGTAAAGAACAAAAACATGAATTGCAGAAACCTCGCTGGAAGAGGCAACCTAATAGTGACAAATCATCAAATGTCACTCAATGTTTTGGGCCGAGAGACCTAGAACATAATTTCGGCAGTGCTGATGTTGTAGCTAATGGTGTGAAAGCCAAAGGTTACCCACAATTTGCTGAGTTAGTGCCTTCCACAGCTGCTGTGTTGTTTGACAGCCATATAGACTCCAAAGAGGCTGGTGATTCAGTTCTGTTGACTTTTACTACCAGAGTGAAAGTTCCTAAAGATCACCCTCATTTGGGTAAGTTTTTGGAAGAAATTAATGCTTTCACAAAACCCTCTCAGGTCAAAGAAACACAACAACACCCGCTG---------CTTAATCCAGCTGCACAGGATTTTACCCCTTCA---ACTTCGTCATCAACTGTTGAACCAGTTTATGACGAAGTTGCATTAGAAACAGACATAATTGATGAAGTCAAC >Camel229E_CoV_AC04_KSA_2014_NA_AOI28287_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E ATGGCTACAGTCAACTGGGCTGATTCCTCTGAACCACAACGTGGTCGTCAGGGCAGAATACCTTATTCCCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCACCAACAAGAAAGATAAAAGCAAGCTTATAGGCTATTGGAATATTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTTGACTTGTCACCTAAGTTGCACTTCTATTATCTTGGCACAGGACCCCACAAAGATGCTAAATTCAGAGAGCGCATT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACCGAACCTACTGGTTATGGTGTTAGGCGCAAGAATTCAGATCCAGAAGAACCACGCTTCAGTCAAAGTCTTCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCTCGTGCTCCTTCGCGTTCTCAGTCAAAGTCACAGAGCCGAGGTCGTGGTGAA---TTTAAACCTCAGTCGCGCAATTCTTCAAGT------------------------------GCAAGTCAGGACGACATTATTAAGGCAGTAGCTGCTGCTCTTAAATCTTTAGGTTTT------------GAA------AAAGAGAAAGAGGCAGCGAAAAAGGGTACTCCTAAGCCTTCTAGAAATCAGAGTCCTGCTTCTTTTCAGACTCGTGCCAAGAGCCCTGCTCGTCCTCAGAATTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAACCACGGTGGAAAAGACAGCCTAATGATGATTTGACATCTAATGTTACACAGTGTTTTGGCCCCAGAGATCCTTACCACAACTTTGGAAGTGCAGGTGTTGTAGCTAATGGTGTCAAAGCCAAAGGCTACCCACAATTTGCTGAACTTGTGCCTTCTACAGCTGCCATGCTGTTTGACAGTCACATTGACTCTAAGGAGTCTGGCAATAATGTTGTTCTTACTTACACAACTAGGGTTACAGTGCCCAAGGACCACCCGCATTTGGGCAAGTTCTTAGAGGAGTTAAATGCATTCACTAAGCCTCTACAA---GGAGACATGCAACAACACCCTCTT---------CTTAACCCTAGTGCACAAGAATTA---------CAAACTTCACCTGGAACTGCTGAACCAGTCTACGATGCAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >Camel229E_CoV_JC52_KSA_2014_NA_AOI28279_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E ATGGCTACAGTCAACTGGGCTGATTCCTCTGAACCACAACGTGGTCGTCAGGGCAGAATACCTTATTCCCTTTATAGCCCTTTGCTTGTTGATAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCACCAACAAGAAAGATAAAAGCAAGCTTATAGGCTATTGGAATATTCAAAAACGTTTCAGAACTAGAAAGGGCAAACGGGTTGACTTGTCACCTAAGTTGCACTTCTATTATCTTGGCACAGGACCCCACAAAGATGCTAAATTCAGAGAGCGCATT------GAAGGTGTTGTCTGGGTTGCTGTTGATGGTGCTAAAACCGAACCTACTGGTTATGGTGTTAGGCGCAAGAATTCAGATCCAGAAGAACCACGCTTCAGTCAAAGTCTTCCAAATGGTGTTACTGTTGTTGAAGAACCTGACTCTCGTGCTCCTTCGCGTTCTCAGTCAAAGTCACAGAGCCGAGGTCGTGGTGAA---TTTAAACCTCAGTCGCGCAATTCTTCAAGT------------------------------GCAAGTCAGGACGACATTATTAAGGCAGTAGCTGCTGCTCTTAAATCTTTAGGTTTT------------GAA------AAAGAGAAAGAGGCAGCGAAAAAGGGTACTCCTAAGCCTTCTAGAAATCAGAGTCCTGCTTCTTTTCAGATTCGTGCCAAGAGCCCTGCTCGTCCTCAGAATTCTGAAACAAAAGAACAAAAGCATGAAATGCAAAAACCACGGTGGAAAAGACAGCCTAATGATGATTTGACATCTAATGTTACACAGTGTTTTGGCCCCAGAGATCCTTACCACAACTTTGGAAGTGCAGGTGTTGTAGCTAATGGTGTCAAAGCCAAAGGCTACCCACAATTTGCTGAACTTGTGCCTTCTACAGCTGCCATGCTGTTTGACAGTCACATTGACTCTAAGGAGTCTGGCAATAATGTTGTTCTTACTTACACAACTAGGGTTACAGTGCCCAAGGACCACCCGCATTTGGGCAAGTTCTTAGAGGAGTTAAATGCATTCACTAAGCCTCTACAA---GGAGACATGCAACAACACCCTCTT---------CTTAACCCTAGTGCACAAGAATTA---------CAAACTTCACCTGGAACTGCTGAACCAGTCTACGATGCAGTTTCTATTGAAACTGACATAATTGATGAAGTCAAC >BtCoV_AT1A_F1_Hip_aba_GHA_2010_NA_ALK28797_1_2010_Ghana_Bat_Human_coronavirus_229E ATGGCTACAGTTAACTGGGCTGATGAGTCTGAGCAGCAGCGTGGTCGTCAGGGTAGAATCCCTTATTCCGTTTATAGTCCTTTGCTTGTTGACAGTGAACAACCTTGGAAGGTGATACCTCGTAATTTGGTACCCATCAACAAGAAAGATAAAGACAAGCTTATAGGCTATTGGAACATTCAAAAACGCTTCAGAACTAGAAAGGGCAAACGGGTTGACTTACCACCTAAGTTGCATTTCTATTATCTTGGCACAGGACCCCATAAAGATGCAAAATTCAGGGAGCGCATT------GAAGGTGTCGTCTGGGTTGCTGTAGATGGTGCTAAAACCGAACCTACAGGTTATGGTGTTAGGCGCAAGAATTTAAACCCAGAAGAACCACGTTTCAGTCAAGCTCTCCCAAATGGTGTTACTGTTGTTGAAGAACCTGATTCTCGTGCTCCGTCTCGTTCTCAGTCAAGGTCACAGAGCCGAGGTCGTGGTGAG---TCCAAACCTCAGTCTCGAAACTCTTCAAGTGACAGA---------------AACCAGAAGTCAAGTCAGGATGACATCTTGAAGGCTGTTGCTGCTGCTCTTAAATCTCTAGGTTTTGAT---CCTCAGGAA------AAGGCGAAAAAGGCAGCGAAAAAGGGCACTCCTAAGCCTTCTAGAAATCAGAGTCCTGTTTCTTCACAGACTCGTGCCAAGAGTCCTGCTCGTCCTCAGAGCTCTGAAACAAAAGAACAAAAACATGAATTGCAAAAACCTCGCTGGAAGCGACAGCCTAATAGTGATGTGACATCTAATGTCACACAGTGCTTTGGCCCCAGAGATCTTGACCACAATTTTGGTAGCGCCGATGTTGTGGCCAATGGTGTTAAAGCTAAAGGCTATCCACAATTTGCTGAGCTTGTGCCGTCAACAGCTGCTATGCTGTTTGATAGTCACATTGATTCCAAAGAGTCAGGCAACAATGTGGTCTTGACTTTCACTACTAGAGTGACTGTGCCTAAAGACCATCCACACTTGGGTAAGTTTCTTGAGGAGATAAATGCATTCACTAAGCCTTCACAGGTTAGAGAAATGCAACAACACCCTCTT---------CTTAACCCTAGTGCTCAAGAATTCAACCCATCTCAAACTTCACCTGCACCTGCTGAACCAGTGTATGACGAAGTTGCTATTGAAACTGACATAATTGATGAAGTCAAC
>BtCoV_FO1A_F2_Hip_aba_GHA_2010_NA_ALK28785_1_2010_Ghana_Bat_Human_coronavirus_229E MATVNWADASEPQRGRQSRIPYSLYSPLLVDNDQPWKVIPRNLVPTNKKDKSKLIGYWNIQKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQALPNGVTVVEEPDSRAPSRSQSRSQSRGRGE-SKPQSRNSSSDRNQKSSQDDIMKAVAAALKSLGFEKPQEKENKVAKKGTPKPSRNQSPAPSQTRAKSPARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPSQVREMQQHPLLNPSAQEFNPSQTSPATVEPVYDEVAIETDIIDEVN >HCoV_229E_BN1_GER_2015_NA_AOG74787_1_2015_Germany_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRGRGE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >0349_NA_AFR79254_1_2010_Netherlands_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >camel_Riyadh_Ry141_2015_N_YP_009194643_1_2015_03_Saudi_Arabia_Camel_Human_coronavirus_229E MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRKNSDPEEPLFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-FKPQSRNSSS-----ASQDDIIKAVAAALKSLGF----EKEKEAAKKGTPKPSRNQSPASFQTRAKSPARPQNSETKEQKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPLQ-GDMQQHPLLNPSAQEL---QTSPGTAEPVYDAVSIETDIIDEVN >HCoV_229E_Seattle_USA_SC379_2016_NA_ARK08624_1_2016_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRVE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >Camel229E_CoV_JC50_KSA_2014_NA_AOI28262_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E MATVNWADFSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-FKPQSRNSSS-----ASQDDIIKAVAAALKSLGF----EKEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKEQKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPLQ-GDMQQHPLLNPSAQEL---QTSPGTAEPVYDAVSIETDIIDEVN >HCoV_229E_Seattle_USA_SC579_2016_NA_APT69853_1_2016_USA_Human_Human_coronavirus_229E MATVKWADAPEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRVE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >229E_UF_1_2016_NA_ARX11400_1_2016_11_23_USA_Unknown_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >HCoV_229E_Seattle_USA_SC9773_2016_NA_APT69891_1_2016_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >229E_N_AAG48597_1_NA_Thailand_Unknown_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRGRGE-SKPQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQTSAKSLARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQHPLLNPSALEFNPSQTSPATAEPVRDEVSIETDIIDEVN >BtCoV_KW2E_F56_Hip_cf_rub_GHA_2011_NA_ALK28791_1_2011_Ghana_Bat_Human_coronavirus_229E MATVNWADESEQPRGRQARIPYSLYRPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNVQKRFRTRKGQRVDLPPKLHFYYLGTGPHQDAKFRDRREGVIWVAIDGAKTEPTGYGVRRRNADPEEPRFNQNLPSGVSIVEEPDSRGPSRSQSRSQSRGRGA-SKPQSRNTSTERSQGSNQEDLLKAVAAALKSLGFEKPQEKDQKKGRKSTPKPSRSQSPVANQSRSKSPARSASSD-KEQKHEMQKPRWKRQPNSDKTSNVTQCFGPRDFEHNFGNPELLANGVKAKGYPQFAELVPSTAAMLFDSHIDTKEEGESVVLTYTTRVKVPKDHPNLGKFLDQLNAFTKPSSVKETQSHP-MNPAAPEFSP--IVPSNPEPIYDAVAMETDIIDEVN >HCoV_229E_USA_UNM_0186_2016_N_QJY77951_1_2016_02_09_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNVQRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >HCoV_229E_Seattle_USA_SC1212_2016_NA_APT69873_1_2016_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNVQRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >CA08_1_2008_N_AFI49435_1_2008_USA_Camel_Human_coronavirus_229E MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRKNLDPEEPRFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-FKPQSRNSSS-----ASQDDIIKAVAAALKSLGF----EKEKEAVKKGTPKPSRNQSPASSQTRAKSPARPQNSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPSQ-GDMQQHPLLNPSAQEFNPSQTSPGTVEPVYDAVSIETDIIDEVN >229E_Haiti_1_2016_NA_AST12968_1_2016_03_Haiti_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSDQPWKVIPRNLVPVNKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVADEPDSRAPSRSQSRSQSRSRVE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >229E_human_USA_933_50_1993_N_AGT21349_1_1993_03_18_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRGRGE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >229E_human_USA_933_40_1993_N_AGT21371_1_1993_03_11_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQSRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRGRGE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >HCoV_229E_Seattle_USA_SC1143_2016_NA_APT69866_1_2016_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNVQRRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDATSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >HCoV_229E_Seattle_USA_SC0865_2019_NA_QEG03789_1_2019_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >HCoV_229E_Seattle_USA_SC3112_2015_NA_ARU07605_1_2015_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRVE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >Camel229E_CoV_KCSP1_KEN_2015_NA_AOG74793_1_2015_Kenya_Camel_Human_coronavirus_229E MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-F----RNSSS-----ASQDDIMKAVAAALKSLGFDKPQEKEKKAAKKVTPKPSRNQSPASSQTCAKSPARPQNSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLYHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIDFNESGNNVVLIYTTRVTVPKDHPHLGKFLEELNAFTKPSQ-GEMQQHPLLNPSAQEFNSLQTLPGTVESVYDAVAIETDIIDEVN >HCoV_229E_Seattle_USA_SC677_2016_NA_APT69860_1_2016_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRVE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARAQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >HCoV_229E_Seattle_USA_SC9724_2018_NA_QEO75989_1_2018_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSR-------IQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >HCoV_229E_Seattle_USA_SC9731_2016_NA_APT69880_1_2016_USA_Human_Human_coronavirus_229E MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPVNKKDKNKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVAEEPDSRAPSRSQSRSQSRSRGE-SKSQSRNPSSDRNH-NSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQSAAKILARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFT-----REMQQQPLLNPSALEFNPSQTSPATVEPVRDEVSIETDIIDEVN >Camel229E_CoV_JC50_HUH7_KSA_2014_NA_AOI28294_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E MATVNWADFSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-FKPQSRNSSS-----ASQDDIIKAVAAALKSLGF----EKEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKEQKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPLQ-GDMQQHPLLNPSAQEL---QTSPGTAEPVYDAVSIETDIIDEVN >BtKY229E_1_N_APD51503_1_2009_06_20_Kenya_Bat_Human_coronavirus_229E MASVNWADASEPQRGRSGRIPFSLYNPLLVENGQPWKVIPRDLVPTNKKEKDKLIGYWNVQKRFRTKKGQRVDLPPKVHFYYLGTGPHKESKFRERIDGVVWVAVNGAKTEPTGYGVRRKNADPETPKFNQKLPNGLSIVEDPDSRATSRSQSRSQSRDRGKNSKPQSRSSSTERP--QSQDDIMKAVAAALKSLGFEKPQEPQQKK-KKATPKSSRSSSPAPVK------AQSSDAQSKEQKHELQKPRWKRQPNSDKSSNVTQCFGPRDLEHNFGSADVVANGVKAKGYPQFAELVPSTAAVLFDSHIDSKEAGDSVLLTFTTRVKVPKDHPHLGKFLEEINAFTKPSQVKETQQHPLLNPAAQDFTPS-TSSSTVEPVYDEVALETDIIDEVN >Camel229E_CoV_AC04_KSA_2014_NA_AOI28287_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-FKPQSRNSSS-----ASQDDIIKAVAAALKSLGF----EKEKEAAKKGTPKPSRNQSPASFQTRAKSPARPQNSETKEQKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPLQ-GDMQQHPLLNPSAQEL---QTSPGTAEPVYDAVSIETDIIDEVN >Camel229E_CoV_JC52_KSA_2014_NA_AOI28279_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E MATVNWADSSEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPTNKKDKSKLIGYWNIQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRKNSDPEEPRFSQSLPNGVTVVEEPDSRAPSRSQSKSQSRGRGE-FKPQSRNSSS-----ASQDDIIKAVAAALKSLGF----EKEKEAAKKGTPKPSRNQSPASFQIRAKSPARPQNSETKEQKHEMQKPRWKRQPNDDLTSNVTQCFGPRDPYHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIDSKESGNNVVLTYTTRVTVPKDHPHLGKFLEELNAFTKPLQ-GDMQQHPLLNPSAQEL---QTSPGTAEPVYDAVSIETDIIDEVN >BtCoV_AT1A_F1_Hip_aba_GHA_2010_NA_ALK28797_1_2010_Ghana_Bat_Human_coronavirus_229E MATVNWADESEQQRGRQGRIPYSVYSPLLVDSEQPWKVIPRNLVPINKKDKDKLIGYWNIQKRFRTRKGKRVDLPPKLHFYYLGTGPHKDAKFRERIEGVVWVAVDGAKTEPTGYGVRRKNLNPEEPRFSQALPNGVTVVEEPDSRAPSRSQSRSQSRGRGE-SKPQSRNSSSDRNQKSSQDDILKAVAAALKSLGFD-PQEKAKKAAKKGTPKPSRNQSPVSSQTRAKSPARPQSSETKEQKHELQKPRWKRQPNSDVTSNVTQCFGPRDLDHNFGSADVVANGVKAKGYPQFAELVPSTAAMLFDSHIDSKESGNNVVLTFTTRVTVPKDHPHLGKFLEEINAFTKPSQVREMQQHPLLNPSAQEFNPSQTSPAPAEPVYDEVAIETDIIDEVN
Reading sequence file /data//pss_subsets/229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E.result/original_alignment/codeml/fasta/229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E.result.1
Found 30 sequences of length 1224
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 8.3%
Found 249 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0% 64.3% 96.2%100.0%
Using a window size of 80 with k as 16
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 282 polymorphic sites
**p-Value(s)**
----------
NSS: 0.00e+00 (1000 permutations)
Max Chi^2: 0.00e+00 (1000 permutations)
PHI (Permutation): 1.00e-03 (1000 permutations)
PHI (Normal): 4.78e-05
#NEXUS
[ID: 6800219872]
begin taxa;
dimensions ntax=30;
taxlabels
0349_NA_AFR79254_1_2010_Netherlands_Human_Human_coronavirus_229E
BtCoV_KW2E_F56_Hip_cf_rub_GHA_2011_NA_ALK28791_1_2011_Ghana_Bat_Human_coronavirus_229E
BtKY229E_1_N_APD51503_1_2009_06_20_Kenya_Bat_Human_coronavirus_229E
CA08_1_2008_N_AFI49435_1_2008_USA_Camel_Human_coronavirus_229E
Camel229E_CoV_AC04_KSA_2014_NA_AOI28287_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E
Camel229E_CoV_JC50_HUH7_KSA_2014_NA_AOI28294_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E
Camel229E_CoV_JC50_KSA_2014_NA_AOI28262_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E
Camel229E_CoV_KCSP1_KEN_2015_NA_AOG74793_1_2015_Kenya_Camel_Human_coronavirus_229E
229E_N_AAG48597_1_NA_Thailand_Unknown_Human_coronavirus_229E
Camel229E_CoV_JC52_KSA_2014_NA_AOI28279_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E
HCoV_229E_BN1_GER_2015_NA_AOG74787_1_2015_Germany_Human_Human_coronavirus_229E
HCoV_229E_Seattle_USA_SC0865_2019_NA_QEG03789_1_2019_USA_Human_Human_coronavirus_229E
HCoV_229E_Seattle_USA_SC1143_2016_NA_APT69866_1_2016_USA_Human_Human_coronavirus_229E
HCoV_229E_Seattle_USA_SC1212_2016_NA_APT69873_1_2016_USA_Human_Human_coronavirus_229E
HCoV_229E_Seattle_USA_SC3112_2015_NA_ARU07605_1_2015_USA_Human_Human_coronavirus_229E
HCoV_229E_Seattle_USA_SC379_2016_NA_ARK08624_1_2016_USA_Human_Human_coronavirus_229E
229E_Haiti_1_2016_NA_AST12968_1_2016_03_Haiti_Human_Human_coronavirus_229E
HCoV_229E_Seattle_USA_SC579_2016_NA_APT69853_1_2016_USA_Human_Human_coronavirus_229E
HCoV_229E_Seattle_USA_SC677_2016_NA_APT69860_1_2016_USA_Human_Human_coronavirus_229E
HCoV_229E_Seattle_USA_SC9724_2018_NA_QEO75989_1_2018_USA_Human_Human_coronavirus_229E
HCoV_229E_Seattle_USA_SC9731_2016_NA_APT69880_1_2016_USA_Human_Human_coronavirus_229E
HCoV_229E_Seattle_USA_SC9773_2016_NA_APT69891_1_2016_USA_Human_Human_coronavirus_229E
HCoV_229E_USA_UNM_0186_2016_N_QJY77951_1_2016_02_09_USA_Human_Human_coronavirus_229E
229E_UF_1_2016_NA_ARX11400_1_2016_11_23_USA_Unknown_Human_coronavirus_229E
camel_Riyadh_Ry141_2015_N_YP_009194643_1_2015_03_Saudi_Arabia_Camel_Human_coronavirus_229E
229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E
229E_human_USA_933_40_1993_N_AGT21371_1_1993_03_11_USA_Human_Human_coronavirus_229E
BtCoV_AT1A_F1_Hip_aba_GHA_2010_NA_ALK28797_1_2010_Ghana_Bat_Human_coronavirus_229E
229E_human_USA_933_50_1993_N_AGT21349_1_1993_03_18_USA_Human_Human_coronavirus_229E
BtCoV_FO1A_F2_Hip_aba_GHA_2010_NA_ALK28785_1_2010_Ghana_Bat_Human_coronavirus_229E
;
end;
begin trees;
translate
1 0349_NA_AFR79254_1_2010_Netherlands_Human_Human_coronavirus_229E,
2 BtCoV_KW2E_F56_Hip_cf_rub_GHA_2011_NA_ALK28791_1_2011_Ghana_Bat_Human_coronavirus_229E,
3 BtKY229E_1_N_APD51503_1_2009_06_20_Kenya_Bat_Human_coronavirus_229E,
4 CA08_1_2008_N_AFI49435_1_2008_USA_Camel_Human_coronavirus_229E,
5 Camel229E_CoV_AC04_KSA_2014_NA_AOI28287_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E,
6 Camel229E_CoV_JC50_HUH7_KSA_2014_NA_AOI28294_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E,
7 Camel229E_CoV_JC50_KSA_2014_NA_AOI28262_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E,
8 Camel229E_CoV_KCSP1_KEN_2015_NA_AOG74793_1_2015_Kenya_Camel_Human_coronavirus_229E,
9 229E_N_AAG48597_1_NA_Thailand_Unknown_Human_coronavirus_229E,
10 Camel229E_CoV_JC52_KSA_2014_NA_AOI28279_1_2014_Saudi_Arabia_Camel_Human_coronavirus_229E,
11 HCoV_229E_BN1_GER_2015_NA_AOG74787_1_2015_Germany_Human_Human_coronavirus_229E,
12 HCoV_229E_Seattle_USA_SC0865_2019_NA_QEG03789_1_2019_USA_Human_Human_coronavirus_229E,
13 HCoV_229E_Seattle_USA_SC1143_2016_NA_APT69866_1_2016_USA_Human_Human_coronavirus_229E,
14 HCoV_229E_Seattle_USA_SC1212_2016_NA_APT69873_1_2016_USA_Human_Human_coronavirus_229E,
15 HCoV_229E_Seattle_USA_SC3112_2015_NA_ARU07605_1_2015_USA_Human_Human_coronavirus_229E,
16 HCoV_229E_Seattle_USA_SC379_2016_NA_ARK08624_1_2016_USA_Human_Human_coronavirus_229E,
17 229E_Haiti_1_2016_NA_AST12968_1_2016_03_Haiti_Human_Human_coronavirus_229E,
18 HCoV_229E_Seattle_USA_SC579_2016_NA_APT69853_1_2016_USA_Human_Human_coronavirus_229E,
19 HCoV_229E_Seattle_USA_SC677_2016_NA_APT69860_1_2016_USA_Human_Human_coronavirus_229E,
20 HCoV_229E_Seattle_USA_SC9724_2018_NA_QEO75989_1_2018_USA_Human_Human_coronavirus_229E,
21 HCoV_229E_Seattle_USA_SC9731_2016_NA_APT69880_1_2016_USA_Human_Human_coronavirus_229E,
22 HCoV_229E_Seattle_USA_SC9773_2016_NA_APT69891_1_2016_USA_Human_Human_coronavirus_229E,
23 HCoV_229E_USA_UNM_0186_2016_N_QJY77951_1_2016_02_09_USA_Human_Human_coronavirus_229E,
24 229E_UF_1_2016_NA_ARX11400_1_2016_11_23_USA_Unknown_Human_coronavirus_229E,
25 camel_Riyadh_Ry141_2015_N_YP_009194643_1_2015_03_Saudi_Arabia_Camel_Human_coronavirus_229E,
26 229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E,
27 229E_human_USA_933_40_1993_N_AGT21371_1_1993_03_11_USA_Human_Human_coronavirus_229E,
28 BtCoV_AT1A_F1_Hip_aba_GHA_2010_NA_ALK28797_1_2010_Ghana_Bat_Human_coronavirus_229E,
29 229E_human_USA_933_50_1993_N_AGT21349_1_1993_03_18_USA_Human_Human_coronavirus_229E,
30 BtCoV_FO1A_F2_Hip_aba_GHA_2010_NA_ALK28785_1_2010_Ghana_Bat_Human_coronavirus_229E
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:1.675539e-03,24:1.739654e-03,(((((((2:2.983089e-01,3:3.557130e-01)1.000:1.460965e-01,(((4:3.723465e-03,(5:7.217659e-04,((6:7.603192e-04,7:7.285981e-04)0.983:1.839081e-03,10:7.552804e-04)0.952:1.792391e-03,25:2.889081e-03)1.000:8.605737e-03)1.000:1.704155e-02,8:1.713411e-02)1.000:3.811783e-02,30:3.875996e-02)0.996:2.742554e-02)0.592:2.668105e-02,28:5.971161e-02)1.000:7.264086e-02,9:4.760489e-03)1.000:1.656697e-02,29:2.154890e-03)0.617:1.600560e-03,26:7.200447e-04,27:1.727856e-03)1.000:7.826515e-03,11:3.647346e-03,(12:2.802565e-03,20:2.831981e-03)0.999:2.779200e-03,((13:7.441083e-04,14:7.704673e-04)1.000:2.793509e-03,23:1.774598e-03)1.000:4.954308e-03,(15:7.044944e-04,(16:7.291442e-04,19:7.199537e-04)1.000:2.781128e-03,18:1.769915e-03)0.983:2.555071e-03,17:3.701355e-03,(21:2.735798e-03,22:7.040900e-04)1.000:2.730484e-03)0.770:2.674845e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:1.675539e-03,24:1.739654e-03,(((((((2:2.983089e-01,3:3.557130e-01):1.460965e-01,(((4:3.723465e-03,(5:7.217659e-04,((6:7.603192e-04,7:7.285981e-04):1.839081e-03,10:7.552804e-04):1.792391e-03,25:2.889081e-03):8.605737e-03):1.704155e-02,8:1.713411e-02):3.811783e-02,30:3.875996e-02):2.742554e-02):2.668105e-02,28:5.971161e-02):7.264086e-02,9:4.760489e-03):1.656697e-02,29:2.154890e-03):1.600560e-03,26:7.200447e-04,27:1.727856e-03):7.826515e-03,11:3.647346e-03,(12:2.802565e-03,20:2.831981e-03):2.779200e-03,((13:7.441083e-04,14:7.704673e-04):2.793509e-03,23:1.774598e-03):4.954308e-03,(15:7.044944e-04,(16:7.291442e-04,19:7.199537e-04):2.781128e-03,18:1.769915e-03):2.555071e-03,17:3.701355e-03,(21:2.735798e-03,22:7.040900e-04):2.730484e-03):2.674845e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -4959.36 -4997.74
2 -4960.26 -4999.29
--------------------------------------
TOTAL -4959.71 -4998.78
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.237748 0.007609 1.067722 1.405298 1.234601 1181.77 1213.79 1.000
r(A<->C){all} 0.098765 0.000239 0.069355 0.129029 0.098609 787.21 867.40 1.000
r(A<->G){all} 0.206776 0.000463 0.163288 0.248103 0.206106 654.49 781.78 1.000
r(A<->T){all} 0.094843 0.000201 0.067337 0.123734 0.094107 1018.52 1064.95 1.001
r(C<->G){all} 0.039740 0.000186 0.014744 0.066225 0.038741 677.03 685.73 1.001
r(C<->T){all} 0.435846 0.000857 0.381881 0.493293 0.435728 656.81 743.46 1.000
r(G<->T){all} 0.124030 0.000278 0.090023 0.154877 0.123026 979.04 994.88 1.002
pi(A){all} 0.299898 0.000138 0.276670 0.322060 0.299787 698.26 912.95 1.002
pi(C){all} 0.214679 0.000107 0.194596 0.234738 0.214545 825.50 1019.52 1.000
pi(G){all} 0.218498 0.000115 0.198131 0.239909 0.218304 698.57 767.02 1.000
pi(T){all} 0.266925 0.000116 0.246911 0.287920 0.266755 1032.85 1107.24 1.001
alpha{1,2} 0.236074 0.000948 0.179795 0.297236 0.233122 990.08 1196.90 1.000
alpha{3} 3.639522 1.679862 1.596930 6.172227 3.397841 1283.37 1283.86 1.000
pinvar{all} 0.074871 0.002079 0.000070 0.155808 0.070390 1219.84 1264.10 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/229E_human_USA_932_72_1993_N_AGT21364_1_1993_02_22_USA_Human_Human_coronavirus_229E.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 30 ls = 359
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 5 8 8 8 6 7 | Ser TCT 11 13 12 13 13 12 | Tyr TAT 7 5 6 5 6 5 | Cys TGT 1 1 1 1 1 1
TTC 7 5 5 5 6 6 | TCC 2 3 3 3 2 3 | TAC 2 2 1 2 4 2 | TGC 0 0 0 0 0 0
Leu TTA 3 3 3 4 4 3 | TCA 7 7 7 7 6 7 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 5 5 5 5 6 5 | TCG 1 0 1 0 1 0 | TAG 0 0 0 0 0 0 | Trp TGG 5 5 5 5 5 5
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 9 10 10 10 9 10 | Pro CCT 19 16 15 16 18 16 | His CAT 5 4 4 4 3 4 | Arg CGT 9 10 10 10 7 11
CTC 1 1 1 1 1 1 | CCC 3 3 5 4 4 4 | CAC 3 4 4 4 5 4 | CGC 1 2 2 2 3 2
CTA 0 1 1 0 0 1 | CCA 7 9 8 8 7 8 | Gln CAA 12 11 11 11 10 11 | CGA 2 0 0 0 1 0
CTG 1 0 0 0 1 0 | CCG 1 1 1 1 1 1 | CAG 7 8 8 8 9 8 | CGG 2 3 3 3 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 5 3 3 3 7 3 | Thr ACT 7 11 12 11 10 11 | Asn AAT 12 12 11 11 13 11 | Ser AGT 9 9 9 9 9 9
ATC 1 1 2 2 0 1 | ACC 3 2 1 2 2 2 | AAC 7 6 7 7 5 7 | AGC 3 1 1 1 3 1
ATA 4 5 5 5 4 5 | ACA 7 6 6 6 7 6 | Lys AAA 16 18 18 18 16 18 | Arg AGA 7 8 8 8 7 8
Met ATG 5 5 5 5 4 5 | ACG 2 1 1 1 0 1 | AAG 13 13 13 13 14 13 | AGG 4 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 14 15 14 15 15 14 | Ala GCT 16 14 13 13 15 15 | Asp GAT 11 11 11 11 11 11 | Gly GGT 11 12 12 12 10 12
GTC 7 6 7 6 5 7 | GCC 2 1 1 1 2 1 | GAC 10 8 8 8 9 8 | GGC 6 6 6 6 8 6
GTA 4 1 1 1 3 1 | GCA 5 7 7 7 7 7 | Glu GAA 18 18 18 18 17 18 | GGA 2 2 2 2 4 2
GTG 4 9 9 9 3 9 | GCG 1 1 1 1 0 1 | GAG 5 5 5 5 6 5 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 6 7 8 8 8 8 | Ser TCT 13 12 13 13 11 11 | Tyr TAT 6 5 5 6 6 6 | Cys TGT 1 1 1 1 1 0
TTC 7 6 5 5 5 5 | TCC 1 3 3 3 3 4 | TAC 4 2 2 1 1 3 | TGC 0 0 0 0 0 1
Leu TTA 4 3 4 3 2 4 | TCA 6 7 7 7 7 4 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 6 5 5 5 5 9 | TCG 1 0 0 0 2 1 | TAG 0 0 0 0 0 0 | Trp TGG 5 5 5 5 5 5
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 9 10 10 10 9 4 | Pro CCT 18 17 16 16 15 16 | His CAT 2 4 4 4 5 3 | Arg CGT 7 10 10 10 9 10
CTC 0 1 1 1 1 1 | CCC 4 4 3 4 5 4 | CAC 6 4 4 4 4 4 | CGC 4 2 2 2 2 7
CTA 0 1 0 1 1 1 | CCA 7 8 9 8 8 8 | Gln CAA 10 11 11 11 11 6 | CGA 1 0 0 0 0 0
CTG 1 0 0 0 2 2 | CCG 1 1 1 1 1 4 | CAG 9 8 8 8 7 14 | CGG 2 3 3 3 4 2
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 7 3 3 4 3 7 | Thr ACT 10 11 11 11 13 5 | Asn AAT 13 11 11 11 12 14 | Ser AGT 9 9 9 9 9 7
ATC 0 1 1 1 2 2 | ACC 2 2 2 2 0 4 | AAC 5 7 7 7 6 6 | AGC 3 1 1 1 1 2
ATA 4 5 5 5 5 2 | ACA 7 6 6 6 6 6 | Lys AAA 16 18 18 18 18 14 | Arg AGA 7 8 8 8 8 5
Met ATG 4 5 5 5 5 5 | ACG 0 1 1 1 1 4 | AAG 14 13 13 13 13 15 | AGG 2 2 2 2 2 4
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 15 14 15 14 14 10 | Ala GCT 15 14 13 14 14 17 | Asp GAT 11 11 11 11 12 12 | Gly GGT 10 12 12 12 12 11
GTC 5 7 7 7 5 6 | GCC 2 1 1 1 1 5 | GAC 9 8 8 8 7 9 | GGC 8 6 6 6 6 3
GTA 3 1 1 1 2 1 | GCA 7 7 7 7 7 1 | Glu GAA 17 18 18 18 17 14 | GGA 4 2 2 2 2 2
GTG 3 9 9 8 9 6 | GCG 0 1 1 1 1 1 | GAG 6 5 5 5 6 10 | GGG 0 0 0 0 0 2
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 8 8 5 8 8 8 | Ser TCT 13 14 14 13 12 12 | Tyr TAT 5 5 6 6 6 6 | Cys TGT 1 1 1 1 1 1
TTC 5 5 7 5 5 5 | TCC 3 2 2 3 3 3 | TAC 2 2 4 1 1 1 | TGC 0 0 0 0 0 0
Leu TTA 3 3 4 3 3 3 | TCA 7 7 5 7 7 7 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 5 5 5 5 5 5 | TCG 0 0 1 0 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 5 5 5 5 5 5
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 10 10 9 10 10 10 | Pro CCT 15 14 18 16 15 15 | His CAT 4 4 3 4 4 4 | Arg CGT 9 9 7 10 10 10
CTC 1 1 0 1 1 1 | CCC 5 5 4 4 5 5 | CAC 4 4 5 4 4 4 | CGC 3 3 4 2 2 2
CTA 1 1 0 1 1 1 | CCA 8 8 7 8 8 8 | Gln CAA 11 11 10 11 11 11 | CGA 0 0 1 0 0 0
CTG 0 0 1 0 0 0 | CCG 1 2 1 1 1 1 | CAG 8 8 9 8 8 8 | CGG 3 3 2 3 3 3
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 3 3 7 3 3 3 | Thr ACT 12 11 10 11 12 12 | Asn AAT 11 11 13 11 11 11 | Ser AGT 9 9 9 9 9 10
ATC 1 1 0 1 2 2 | ACC 1 2 2 2 1 1 | AAC 7 7 5 7 7 7 | AGC 1 1 3 1 1 1
ATA 5 5 4 5 5 5 | ACA 6 6 7 6 6 6 | Lys AAA 17 17 16 18 18 18 | Arg AGA 9 9 7 8 7 8
Met ATG 5 5 4 5 5 5 | ACG 1 1 0 1 1 1 | AAG 13 13 14 13 13 13 | AGG 2 2 2 2 3 2
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 14 14 16 14 14 14 | Ala GCT 14 14 14 14 13 13 | Asp GAT 11 11 12 12 11 11 | Gly GGT 12 12 10 12 12 11
GTC 7 7 5 7 6 7 | GCC 1 1 2 1 1 1 | GAC 8 8 8 9 8 8 | GGC 6 6 8 6 6 6
GTA 1 1 3 1 2 1 | GCA 7 7 7 7 7 7 | Glu GAA 18 18 17 16 18 18 | GGA 2 2 4 2 2 2
GTG 8 8 4 9 9 9 | GCG 2 2 0 1 1 1 | GAG 5 5 6 5 5 5 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 8 8 7 8 7 8 | Ser TCT 14 13 13 12 12 13 | Tyr TAT 5 5 5 6 5 5 | Cys TGT 1 1 1 1 1 1
TTC 5 5 6 5 6 5 | TCC 2 3 3 3 3 3 | TAC 2 2 2 4 2 2 | TGC 0 0 0 0 0 0
Leu TTA 3 3 3 4 3 3 | TCA 7 7 7 6 7 7 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 5 5 5 5 5 5 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 5 5 5 5 5 5
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 10 10 10 10 10 10 | Pro CCT 14 16 16 18 16 16 | His CAT 4 4 4 4 4 4 | Arg CGT 9 11 10 7 11 11
CTC 1 1 1 0 1 1 | CCC 5 4 4 4 4 4 | CAC 4 4 4 4 4 4 | CGC 3 1 2 4 2 1
CTA 1 1 1 0 1 1 | CCA 8 8 8 6 8 8 | Gln CAA 11 11 11 10 11 11 | CGA 0 0 0 1 0 0
CTG 0 0 0 1 0 0 | CCG 2 1 1 0 1 1 | CAG 8 8 8 9 8 8 | CGG 3 3 3 2 2 3
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 3 3 3 6 3 3 | Thr ACT 11 12 11 9 11 11 | Asn AAT 11 11 11 14 11 11 | Ser AGT 9 9 9 9 9 9
ATC 1 1 1 1 1 1 | ACC 2 1 2 2 2 2 | AAC 7 7 7 5 7 7 | AGC 1 1 1 3 1 1
ATA 5 5 5 4 5 5 | ACA 6 5 6 7 6 6 | Lys AAA 17 18 18 16 18 18 | Arg AGA 9 8 8 7 8 8
Met ATG 5 5 5 5 5 5 | ACG 1 2 1 0 1 1 | AAG 13 13 13 14 13 13 | AGG 2 2 2 2 2 2
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 14 14 14 17 14 14 | Ala GCT 14 14 14 16 15 14 | Asp GAT 11 11 11 10 11 11 | Gly GGT 12 12 12 10 12 12
GTC 7 7 7 5 7 7 | GCC 1 1 1 1 1 1 | GAC 8 8 8 9 8 8 | GGC 6 6 6 7 6 6
GTA 1 1 1 3 1 1 | GCA 7 7 7 7 7 7 | Glu GAA 18 18 18 17 18 18 | GGA 2 2 2 4 2 2
GTG 8 9 9 4 9 9 | GCG 2 1 1 0 1 1 | GAG 5 5 5 6 5 5 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 8 6 10 6 6 6 | Ser TCT 13 13 8 13 13 10 | Tyr TAT 6 6 5 6 6 8 | Cys TGT 1 1 1 1 1 0
TTC 5 7 4 6 6 7 | TCC 3 1 5 2 2 2 | TAC 1 4 2 4 4 0 | TGC 0 0 0 0 0 1
Leu TTA 3 4 2 4 4 2 | TCA 7 6 11 6 6 8 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 5 6 10 6 6 7 | TCG 0 1 2 1 1 0 | TAG 0 0 0 0 0 0 | Trp TGG 5 5 5 5 5 5
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 10 9 6 9 9 8 | Pro CCT 16 18 13 18 18 18 | His CAT 4 2 6 2 2 4 | Arg CGT 10 7 7 7 7 7
CTC 1 0 0 0 0 1 | CCC 4 4 2 4 4 3 | CAC 4 6 2 6 6 4 | CGC 2 4 4 4 4 4
CTA 1 0 2 0 0 1 | CCA 8 7 11 7 7 7 | Gln CAA 11 10 12 10 10 9 | CGA 0 1 0 1 1 3
CTG 0 1 1 1 1 1 | CCG 1 1 2 1 1 2 | CAG 8 9 9 9 9 11 | CGG 3 2 0 2 2 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 4 7 5 7 7 5 | Thr ACT 11 10 9 10 10 10 | Asn AAT 11 13 13 13 13 10 | Ser AGT 8 9 8 9 9 9
ATC 1 0 2 0 0 3 | ACC 2 2 1 2 2 1 | AAC 7 5 3 5 5 8 | AGC 2 3 1 3 3 3
ATA 5 4 3 4 4 4 | ACA 6 7 9 7 7 6 | Lys AAA 18 16 22 16 16 17 | Arg AGA 8 7 8 7 7 7
Met ATG 5 4 2 4 4 3 | ACG 1 0 0 0 0 0 | AAG 13 14 13 14 14 13 | AGG 2 2 2 2 2 3
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 14 15 13 15 15 14 | Ala GCT 13 15 18 15 15 18 | Asp GAT 11 11 13 11 11 12 | Gly GGT 12 10 11 10 10 11
GTC 7 5 4 5 5 5 | GCC 1 2 2 2 2 2 | GAC 8 9 9 9 9 8 | GGC 6 8 5 8 8 7
GTA 1 3 4 3 3 2 | GCA 7 7 4 7 7 4 | Glu GAA 18 17 19 17 17 17 | GGA 2 4 1 4 4 1
GTG 8 3 7 3 3 8 | GCG 2 0 2 0 0 1 | GAG 5 6 2 6 6 7 | GGG 0 0 2 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C9
position 1: T:0.15599 C:0.22841 A:0.29248 G:0.32312
position 2: T:0.20891 C:0.26184 A:0.35655 G:0.17270
position 3: T:0.42061 C:0.16156 A:0.26184 G:0.15599
Average T:0.26184 C:0.21727 A:0.30362 G:0.21727
#2: C21
position 1: T:0.15877 C:0.23120 A:0.28691 G:0.32312
position 2: T:0.21727 C:0.26462 A:0.34819 G:0.16992
position 3: T:0.42897 C:0.14206 A:0.26741 G:0.16156
Average T:0.26834 C:0.21263 A:0.30084 G:0.21820
#3: C5
position 1: T:0.15877 C:0.23120 A:0.28969 G:0.32033
position 2: T:0.22006 C:0.26184 A:0.34819 G:0.16992
position 3: T:0.42061 C:0.15042 A:0.26462 G:0.16435
Average T:0.26648 C:0.21448 A:0.30084 G:0.21820
#4: C1
position 1: T:0.16156 C:0.22841 A:0.28969 G:0.32033
position 2: T:0.22006 C:0.26184 A:0.34819 G:0.16992
position 3: T:0.42340 C:0.15042 A:0.26462 G:0.16156
Average T:0.26834 C:0.21356 A:0.30084 G:0.21727
#5: C42
position 1: T:0.16713 C:0.22563 A:0.28691 G:0.32033
position 2: T:0.20613 C:0.26462 A:0.35655 G:0.17270
position 3: T:0.42618 C:0.16435 A:0.25905 G:0.15042
Average T:0.26648 C:0.21820 A:0.30084 G:0.21448
#6: C29
position 1: T:0.15599 C:0.23120 A:0.28691 G:0.32591
position 2: T:0.21727 C:0.26462 A:0.34819 G:0.16992
position 3: T:0.42340 C:0.15320 A:0.26462 G:0.15877
Average T:0.26555 C:0.21634 A:0.29991 G:0.21820
#7: C18
position 1: T:0.16713 C:0.22563 A:0.28691 G:0.32033
position 2: T:0.20613 C:0.26184 A:0.35655 G:0.17549
position 3: T:0.42340 C:0.16713 A:0.25905 G:0.15042
Average T:0.26555 C:0.21820 A:0.30084 G:0.21541
#8: C31
position 1: T:0.15599 C:0.23398 A:0.28691 G:0.32312
position 2: T:0.21727 C:0.26462 A:0.34819 G:0.16992
position 3: T:0.42061 C:0.15320 A:0.26462 G:0.16156
Average T:0.26462 C:0.21727 A:0.29991 G:0.21820
#9: C4
position 1: T:0.16156 C:0.22841 A:0.28691 G:0.32312
position 2: T:0.22006 C:0.26184 A:0.34819 G:0.16992
position 3: T:0.42340 C:0.14763 A:0.26741 G:0.16156
Average T:0.26834 C:0.21263 A:0.30084 G:0.21820
#10: C36
position 1: T:0.15877 C:0.23120 A:0.28969 G:0.32033
position 2: T:0.21727 C:0.26462 A:0.34819 G:0.16992
position 3: T:0.42897 C:0.14763 A:0.26462 G:0.15877
Average T:0.26834 C:0.21448 A:0.30084 G:0.21634
#11: C2
position 1: T:0.15599 C:0.23398 A:0.28969 G:0.32033
position 2: T:0.21727 C:0.26462 A:0.34819 G:0.16992
position 3: T:0.42618 C:0.13649 A:0.26184 G:0.17549
Average T:0.26648 C:0.21170 A:0.29991 G:0.22191
#12: C11
position 1: T:0.16992 C:0.23955 A:0.28412 G:0.30641
position 2: T:0.20334 C:0.26462 A:0.36212 G:0.16992
position 3: T:0.39276 C:0.18384 A:0.18942 G:0.23398
Average T:0.25534 C:0.22934 A:0.27855 G:0.23677
#13: C39
position 1: T:0.15877 C:0.23120 A:0.28691 G:0.32312
position 2: T:0.21448 C:0.26741 A:0.34540 G:0.17270
position 3: T:0.42061 C:0.15320 A:0.26462 G:0.16156
Average T:0.26462 C:0.21727 A:0.29898 G:0.21913
#14: C25
position 1: T:0.15877 C:0.23120 A:0.28691 G:0.32312
position 2: T:0.21448 C:0.26741 A:0.34540 G:0.17270
position 3: T:0.41783 C:0.15320 A:0.26462 G:0.16435
Average T:0.26370 C:0.21727 A:0.29898 G:0.22006
#15: C14
position 1: T:0.16435 C:0.22563 A:0.28691 G:0.32312
position 2: T:0.20613 C:0.26184 A:0.35655 G:0.17549
position 3: T:0.42897 C:0.16435 A:0.25627 G:0.15042
Average T:0.26648 C:0.21727 A:0.29991 G:0.21634
#16: C3
position 1: T:0.15877 C:0.23120 A:0.28691 G:0.32312
position 2: T:0.21727 C:0.26462 A:0.34819 G:0.16992
position 3: T:0.42897 C:0.15042 A:0.25905 G:0.16156
Average T:0.26834 C:0.21541 A:0.29805 G:0.21820
#17: C8
position 1: T:0.15877 C:0.23120 A:0.28969 G:0.32033
position 2: T:0.22006 C:0.26184 A:0.34819 G:0.16992
position 3: T:0.42061 C:0.14763 A:0.26462 G:0.16713
Average T:0.26648 C:0.21356 A:0.30084 G:0.21913
#18: C6
position 1: T:0.15877 C:0.23120 A:0.29248 G:0.31755
position 2: T:0.22006 C:0.26184 A:0.34819 G:0.16992
position 3: T:0.42061 C:0.15042 A:0.26462 G:0.16435
Average T:0.26648 C:0.21448 A:0.30176 G:0.21727
#19: C24
position 1: T:0.15877 C:0.23120 A:0.28691 G:0.32312
position 2: T:0.21448 C:0.26741 A:0.34540 G:0.17270
position 3: T:0.41783 C:0.15320 A:0.26462 G:0.16435
Average T:0.26370 C:0.21727 A:0.29898 G:0.22006
#20: C22
position 1: T:0.15877 C:0.23120 A:0.28691 G:0.32312
position 2: T:0.21727 C:0.26462 A:0.34819 G:0.16992
position 3: T:0.42897 C:0.14485 A:0.26184 G:0.16435
Average T:0.26834 C:0.21356 A:0.29898 G:0.21913
#21: C27
position 1: T:0.15877 C:0.23120 A:0.28691 G:0.32312
position 2: T:0.21727 C:0.26462 A:0.34819 G:0.16992
position 3: T:0.42061 C:0.15320 A:0.26462 G:0.16156
Average T:0.26555 C:0.21634 A:0.29991 G:0.21820
#22: C19
position 1: T:0.16435 C:0.22284 A:0.28969 G:0.32312
position 2: T:0.21727 C:0.25348 A:0.35655 G:0.17270
position 3: T:0.43733 C:0.15877 A:0.25627 G:0.14763
Average T:0.27298 C:0.21170 A:0.30084 G:0.21448
#23: C32
position 1: T:0.15599 C:0.23120 A:0.28691 G:0.32591
position 2: T:0.21727 C:0.26462 A:0.34819 G:0.16992
position 3: T:0.42340 C:0.15320 A:0.26462 G:0.15877
Average T:0.26555 C:0.21634 A:0.29991 G:0.21820
#24: C33
position 1: T:0.15877 C:0.23120 A:0.28691 G:0.32312
position 2: T:0.21727 C:0.26462 A:0.34819 G:0.16992
position 3: T:0.42618 C:0.14763 A:0.26462 G:0.16156
Average T:0.26741 C:0.21448 A:0.29991 G:0.21820
#25: C34
position 1: T:0.15877 C:0.23120 A:0.28969 G:0.32033
position 2: T:0.21727 C:0.26462 A:0.34819 G:0.16992
position 3: T:0.42340 C:0.15042 A:0.26462 G:0.16156
Average T:0.26648 C:0.21541 A:0.30084 G:0.21727
#26: C17
position 1: T:0.16713 C:0.22563 A:0.28691 G:0.32033
position 2: T:0.20613 C:0.26184 A:0.35655 G:0.17549
position 3: T:0.42340 C:0.16713 A:0.25905 G:0.15042
Average T:0.26555 C:0.21820 A:0.30084 G:0.21541
#27: C12
position 1: T:0.18106 C:0.21448 A:0.28134 G:0.32312
position 2: T:0.20891 C:0.27577 A:0.36212 G:0.15320
position 3: T:0.40669 C:0.12813 A:0.30084 G:0.16435
Average T:0.26555 C:0.20613 A:0.31476 G:0.21356
#28: C15
position 1: T:0.16713 C:0.22563 A:0.28691 G:0.32033
position 2: T:0.20334 C:0.26462 A:0.35655 G:0.17549
position 3: T:0.42340 C:0.16713 A:0.25905 G:0.15042
Average T:0.26462 C:0.21913 A:0.30084 G:0.21541
#29: C20
position 1: T:0.16713 C:0.22563 A:0.28691 G:0.32033
position 2: T:0.20334 C:0.26462 A:0.35655 G:0.17549
position 3: T:0.42340 C:0.16713 A:0.25905 G:0.15042
Average T:0.26462 C:0.21913 A:0.30084 G:0.21541
#30: C7
position 1: T:0.15599 C:0.23398 A:0.28412 G:0.32591
position 2: T:0.21448 C:0.25627 A:0.35655 G:0.17270
position 3: T:0.41783 C:0.16435 A:0.24513 G:0.17270
Average T:0.26277 C:0.21820 A:0.29526 G:0.22377
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 220 | Ser S TCT 372 | Tyr Y TAT 170 | Cys C TGT 28
TTC 166 | TCC 81 | TAC 66 | TGC 2
Leu L TTA 97 | TCA 204 | *** * TAA 0 | *** * TGA 0
TTG 166 | TCG 15 | TAG 0 | Trp W TGG 150
------------------------------------------------------------------------------
Leu L CTT 280 | Pro P CCT 488 | His H CAT 113 | Arg R CGT 272
CTC 23 | CCC 121 | CAC 127 | CGC 82
CTA 21 | CCA 235 | Gln Q CAA 318 | CGA 12
CTG 14 | CCG 36 | CAG 255 | CGG 75
------------------------------------------------------------------------------
Ile I ATT 129 | Thr T ACT 316 | Asn N AAT 352 | Ser S AGT 267
ATC 33 | ACC 54 | AAC 190 | AGC 50
ATA 136 | ACA 190 | Lys K AAA 520 | Arg R AGA 230
Met M ATG 139 | ACG 26 | AAG 399 | AGG 66
------------------------------------------------------------------------------
Val V GTT 428 | Ala A GCT 436 | Asp D GAT 336 | Gly G GGT 341
GTC 185 | GCC 43 | GAC 250 | GGC 190
GTA 53 | GCA 196 | Glu E GAA 526 | GGA 72
GTG 214 | GCG 28 | GAG 162 | GGG 4
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.16128 C:0.22953 A:0.28756 G:0.32163
position 2: T:0.21393 C:0.26379 A:0.35135 G:0.17094
position 3: T:0.42228 C:0.15441 A:0.26091 G:0.16240
Average T:0.26583 C:0.21591 A:0.29994 G:0.21832
Model 1: NearlyNeutral (2 categories)
TREE # 1: (4, 9, (((((((12, 27), (((15, (28, ((26, 7), 29), 5)), 22), 1)), 30), 11), 17), 3, 18), 2, (20, 24), ((19, 14), 13), (21, (6, 23), 8), 16, (25, 10))); MP score: 572
lnL(ntime: 49 np: 52): -4232.072048 +0.000000
31..4 31..9 31..32 32..33 33..34 34..35 35..36 36..37 37..38 38..12 38..27 37..39 39..40 40..41 41..15 41..42 42..28 42..43 43..44 44..26 44..7 43..29 42..5 40..22 39..1 36..30 35..11 34..17 33..3 33..18 32..2 32..45 45..20 45..24 32..46 46..47 47..19 47..14 46..13 32..48 48..21 48..49 49..6 49..23 48..8 32..16 32..50 50..25 50..10
0.002942 0.002952 0.005912 0.020731 0.002607 0.025812 0.182285 0.056759 0.331420 0.710911 0.899344 0.052641 0.092398 0.042942 0.005763 0.014877 0.000004 0.000004 0.002926 0.000004 0.000004 0.000004 0.005864 0.036839 0.086777 0.189849 0.013643 0.003286 0.000004 0.002941 0.008881 0.008817 0.005891 0.000004 0.011833 0.005894 0.000004 0.000004 0.002924 0.002955 0.000004 0.005888 0.000004 0.000004 0.002935 0.008852 0.008835 0.005897 0.000004 2.120626 0.895574 0.058304
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 2.872075
(4: 0.002942, 9: 0.002952, (((((((12: 0.710911, 27: 0.899344): 0.331420, (((15: 0.005763, (28: 0.000004, ((26: 0.000004, 7: 0.000004): 0.002926, 29: 0.000004): 0.000004, 5: 0.005864): 0.014877): 0.042942, 22: 0.036839): 0.092398, 1: 0.086777): 0.052641): 0.056759, 30: 0.189849): 0.182285, 11: 0.013643): 0.025812, 17: 0.003286): 0.002607, 3: 0.000004, 18: 0.002941): 0.020731, 2: 0.008881, (20: 0.005891, 24: 0.000004): 0.008817, ((19: 0.000004, 14: 0.000004): 0.005894, 13: 0.002924): 0.011833, (21: 0.000004, (6: 0.000004, 23: 0.000004): 0.005888, 8: 0.002935): 0.002955, 16: 0.008852, (25: 0.005897, 10: 0.000004): 0.008835): 0.005912);
(C1: 0.002942, C4: 0.002952, (((((((C11: 0.710911, C12: 0.899344): 0.331420, (((C14: 0.005763, (C15: 0.000004, ((C17: 0.000004, C18: 0.000004): 0.002926, C20: 0.000004): 0.000004, C42: 0.005864): 0.014877): 0.042942, C19: 0.036839): 0.092398, C9: 0.086777): 0.052641): 0.056759, C7: 0.189849): 0.182285, C2: 0.013643): 0.025812, C8: 0.003286): 0.002607, C5: 0.000004, C6: 0.002941): 0.020731, C21: 0.008881, (C22: 0.005891, C33: 0.000004): 0.008817, ((C24: 0.000004, C25: 0.000004): 0.005894, C39: 0.002924): 0.011833, (C27: 0.000004, (C29: 0.000004, C32: 0.000004): 0.005888, C31: 0.002935): 0.002955, C3: 0.008852, (C34: 0.005897, C36: 0.000004): 0.008835): 0.005912);
Detailed output identifying parameters
kappa (ts/tv) = 2.12063
MLEs of dN/dS (w) for site classes (K=2)
p: 0.89557 0.10443
w: 0.05830 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..4 0.003 839.9 237.1 0.1566 0.0004 0.0029 0.4 0.7
31..9 0.003 839.9 237.1 0.1566 0.0005 0.0029 0.4 0.7
31..32 0.006 839.9 237.1 0.1566 0.0009 0.0058 0.8 1.4
32..33 0.021 839.9 237.1 0.1566 0.0032 0.0202 2.7 4.8
33..34 0.003 839.9 237.1 0.1566 0.0004 0.0025 0.3 0.6
34..35 0.026 839.9 237.1 0.1566 0.0039 0.0251 3.3 6.0
35..36 0.182 839.9 237.1 0.1566 0.0278 0.1775 23.4 42.1
36..37 0.057 839.9 237.1 0.1566 0.0087 0.0553 7.3 13.1
37..38 0.331 839.9 237.1 0.1566 0.0506 0.3227 42.5 76.5
38..12 0.711 839.9 237.1 0.1566 0.1084 0.6922 91.1 164.1
38..27 0.899 839.9 237.1 0.1566 0.1372 0.8757 115.2 207.7
37..39 0.053 839.9 237.1 0.1566 0.0080 0.0513 6.7 12.2
39..40 0.092 839.9 237.1 0.1566 0.0141 0.0900 11.8 21.3
40..41 0.043 839.9 237.1 0.1566 0.0065 0.0418 5.5 9.9
41..15 0.006 839.9 237.1 0.1566 0.0009 0.0056 0.7 1.3
41..42 0.015 839.9 237.1 0.1566 0.0023 0.0145 1.9 3.4
42..28 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
42..43 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
43..44 0.003 839.9 237.1 0.1566 0.0004 0.0028 0.4 0.7
44..26 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
44..7 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
43..29 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
42..5 0.006 839.9 237.1 0.1566 0.0009 0.0057 0.8 1.4
40..22 0.037 839.9 237.1 0.1566 0.0056 0.0359 4.7 8.5
39..1 0.087 839.9 237.1 0.1566 0.0132 0.0845 11.1 20.0
36..30 0.190 839.9 237.1 0.1566 0.0290 0.1849 24.3 43.8
35..11 0.014 839.9 237.1 0.1566 0.0021 0.0133 1.7 3.2
34..17 0.003 839.9 237.1 0.1566 0.0005 0.0032 0.4 0.8
33..3 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
33..18 0.003 839.9 237.1 0.1566 0.0004 0.0029 0.4 0.7
32..2 0.009 839.9 237.1 0.1566 0.0014 0.0086 1.1 2.1
32..45 0.009 839.9 237.1 0.1566 0.0013 0.0086 1.1 2.0
45..20 0.006 839.9 237.1 0.1566 0.0009 0.0057 0.8 1.4
45..24 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
32..46 0.012 839.9 237.1 0.1566 0.0018 0.0115 1.5 2.7
46..47 0.006 839.9 237.1 0.1566 0.0009 0.0057 0.8 1.4
47..19 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
47..14 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
46..13 0.003 839.9 237.1 0.1566 0.0004 0.0028 0.4 0.7
32..48 0.003 839.9 237.1 0.1566 0.0005 0.0029 0.4 0.7
48..21 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
48..49 0.006 839.9 237.1 0.1566 0.0009 0.0057 0.8 1.4
49..6 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
49..23 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
48..8 0.003 839.9 237.1 0.1566 0.0004 0.0029 0.4 0.7
32..16 0.009 839.9 237.1 0.1566 0.0014 0.0086 1.1 2.0
32..50 0.009 839.9 237.1 0.1566 0.0013 0.0086 1.1 2.0
50..25 0.006 839.9 237.1 0.1566 0.0009 0.0057 0.8 1.4
50..10 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
Time used: 7:52
Model 2: PositiveSelection (3 categories)
TREE # 1: (4, 9, (((((((12, 27), (((15, (28, ((26, 7), 29), 5)), 22), 1)), 30), 11), 17), 3, 18), 2, (20, 24), ((19, 14), 13), (21, (6, 23), 8), 16, (25, 10))); MP score: 572
lnL(ntime: 49 np: 54): -4232.072048 +0.000000
31..4 31..9 31..32 32..33 33..34 34..35 35..36 36..37 37..38 38..12 38..27 37..39 39..40 40..41 41..15 41..42 42..28 42..43 43..44 44..26 44..7 43..29 42..5 40..22 39..1 36..30 35..11 34..17 33..3 33..18 32..2 32..45 45..20 45..24 32..46 46..47 47..19 47..14 46..13 32..48 48..21 48..49 49..6 49..23 48..8 32..16 32..50 50..25 50..10
0.002942 0.002952 0.005912 0.020731 0.002607 0.025812 0.182285 0.056759 0.331419 0.710911 0.899343 0.052641 0.092398 0.042942 0.005763 0.014877 0.000004 0.000004 0.002926 0.000004 0.000004 0.000004 0.005864 0.036839 0.086777 0.189849 0.013643 0.003286 0.000004 0.002941 0.008881 0.008817 0.005891 0.000004 0.011833 0.005894 0.000004 0.000004 0.002924 0.002955 0.000004 0.005887 0.000004 0.000004 0.002935 0.008852 0.008835 0.005897 0.000004 2.120624 0.895574 0.049127 0.058304 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 2.872072
(4: 0.002942, 9: 0.002952, (((((((12: 0.710911, 27: 0.899343): 0.331419, (((15: 0.005763, (28: 0.000004, ((26: 0.000004, 7: 0.000004): 0.002926, 29: 0.000004): 0.000004, 5: 0.005864): 0.014877): 0.042942, 22: 0.036839): 0.092398, 1: 0.086777): 0.052641): 0.056759, 30: 0.189849): 0.182285, 11: 0.013643): 0.025812, 17: 0.003286): 0.002607, 3: 0.000004, 18: 0.002941): 0.020731, 2: 0.008881, (20: 0.005891, 24: 0.000004): 0.008817, ((19: 0.000004, 14: 0.000004): 0.005894, 13: 0.002924): 0.011833, (21: 0.000004, (6: 0.000004, 23: 0.000004): 0.005887, 8: 0.002935): 0.002955, 16: 0.008852, (25: 0.005897, 10: 0.000004): 0.008835): 0.005912);
(C1: 0.002942, C4: 0.002952, (((((((C11: 0.710911, C12: 0.899343): 0.331419, (((C14: 0.005763, (C15: 0.000004, ((C17: 0.000004, C18: 0.000004): 0.002926, C20: 0.000004): 0.000004, C42: 0.005864): 0.014877): 0.042942, C19: 0.036839): 0.092398, C9: 0.086777): 0.052641): 0.056759, C7: 0.189849): 0.182285, C2: 0.013643): 0.025812, C8: 0.003286): 0.002607, C5: 0.000004, C6: 0.002941): 0.020731, C21: 0.008881, (C22: 0.005891, C33: 0.000004): 0.008817, ((C24: 0.000004, C25: 0.000004): 0.005894, C39: 0.002924): 0.011833, (C27: 0.000004, (C29: 0.000004, C32: 0.000004): 0.005887, C31: 0.002935): 0.002955, C3: 0.008852, (C34: 0.005897, C36: 0.000004): 0.008835): 0.005912);
Detailed output identifying parameters
kappa (ts/tv) = 2.12062
MLEs of dN/dS (w) for site classes (K=3)
p: 0.89557 0.04913 0.05530
w: 0.05830 1.00000 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..4 0.003 839.9 237.1 0.1566 0.0004 0.0029 0.4 0.7
31..9 0.003 839.9 237.1 0.1566 0.0005 0.0029 0.4 0.7
31..32 0.006 839.9 237.1 0.1566 0.0009 0.0058 0.8 1.4
32..33 0.021 839.9 237.1 0.1566 0.0032 0.0202 2.7 4.8
33..34 0.003 839.9 237.1 0.1566 0.0004 0.0025 0.3 0.6
34..35 0.026 839.9 237.1 0.1566 0.0039 0.0251 3.3 6.0
35..36 0.182 839.9 237.1 0.1566 0.0278 0.1775 23.4 42.1
36..37 0.057 839.9 237.1 0.1566 0.0087 0.0553 7.3 13.1
37..38 0.331 839.9 237.1 0.1566 0.0506 0.3227 42.5 76.5
38..12 0.711 839.9 237.1 0.1566 0.1084 0.6922 91.1 164.1
38..27 0.899 839.9 237.1 0.1566 0.1372 0.8757 115.2 207.7
37..39 0.053 839.9 237.1 0.1566 0.0080 0.0513 6.7 12.2
39..40 0.092 839.9 237.1 0.1566 0.0141 0.0900 11.8 21.3
40..41 0.043 839.9 237.1 0.1566 0.0065 0.0418 5.5 9.9
41..15 0.006 839.9 237.1 0.1566 0.0009 0.0056 0.7 1.3
41..42 0.015 839.9 237.1 0.1566 0.0023 0.0145 1.9 3.4
42..28 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
42..43 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
43..44 0.003 839.9 237.1 0.1566 0.0004 0.0028 0.4 0.7
44..26 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
44..7 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
43..29 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
42..5 0.006 839.9 237.1 0.1566 0.0009 0.0057 0.8 1.4
40..22 0.037 839.9 237.1 0.1566 0.0056 0.0359 4.7 8.5
39..1 0.087 839.9 237.1 0.1566 0.0132 0.0845 11.1 20.0
36..30 0.190 839.9 237.1 0.1566 0.0290 0.1849 24.3 43.8
35..11 0.014 839.9 237.1 0.1566 0.0021 0.0133 1.7 3.2
34..17 0.003 839.9 237.1 0.1566 0.0005 0.0032 0.4 0.8
33..3 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
33..18 0.003 839.9 237.1 0.1566 0.0004 0.0029 0.4 0.7
32..2 0.009 839.9 237.1 0.1566 0.0014 0.0086 1.1 2.1
32..45 0.009 839.9 237.1 0.1566 0.0013 0.0086 1.1 2.0
45..20 0.006 839.9 237.1 0.1566 0.0009 0.0057 0.8 1.4
45..24 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
32..46 0.012 839.9 237.1 0.1566 0.0018 0.0115 1.5 2.7
46..47 0.006 839.9 237.1 0.1566 0.0009 0.0057 0.8 1.4
47..19 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
47..14 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
46..13 0.003 839.9 237.1 0.1566 0.0004 0.0028 0.4 0.7
32..48 0.003 839.9 237.1 0.1566 0.0005 0.0029 0.4 0.7
48..21 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
48..49 0.006 839.9 237.1 0.1566 0.0009 0.0057 0.8 1.4
49..6 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
49..23 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
48..8 0.003 839.9 237.1 0.1566 0.0004 0.0029 0.4 0.7
32..16 0.009 839.9 237.1 0.1566 0.0014 0.0086 1.1 2.0
32..50 0.009 839.9 237.1 0.1566 0.0013 0.0086 1.1 2.0
50..25 0.006 839.9 237.1 0.1566 0.0009 0.0057 0.8 1.4
50..10 0.000 839.9 237.1 0.1566 0.0000 0.0000 0.0 0.0
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C9)
Pr(w>1) post mean +- SE for w
132 A 0.538 1.379 +- 0.631
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.904 0.058 0.019 0.009 0.005 0.003 0.002 0.001 0.001 0.001
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.744
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.180 0.076
sum of density on p0-p1 = 1.000000
Time used: 18:34
Model 7: beta (10 categories)
TREE # 1: (4, 9, (((((((12, 27), (((15, (28, ((26, 7), 29), 5)), 22), 1)), 30), 11), 17), 3, 18), 2, (20, 24), ((19, 14), 13), (21, (6, 23), 8), 16, (25, 10))); MP score: 572
lnL(ntime: 49 np: 52): -4227.299939 +0.000000
31..4 31..9 31..32 32..33 33..34 34..35 35..36 36..37 37..38 38..12 38..27 37..39 39..40 40..41 41..15 41..42 42..28 42..43 43..44 44..26 44..7 43..29 42..5 40..22 39..1 36..30 35..11 34..17 33..3 33..18 32..2 32..45 45..20 45..24 32..46 46..47 47..19 47..14 46..13 32..48 48..21 48..49 49..6 49..23 48..8 32..16 32..50 50..25 50..10
0.002951 0.002955 0.005918 0.020762 0.002615 0.025727 0.183483 0.055993 0.331616 0.687020 0.870144 0.052155 0.093441 0.042559 0.005780 0.014891 0.000004 0.000004 0.002930 0.000004 0.000004 0.000004 0.005870 0.037313 0.086081 0.188640 0.013805 0.003287 0.000004 0.002945 0.008894 0.008828 0.005897 0.000004 0.011856 0.005906 0.000004 0.000004 0.002929 0.002959 0.000004 0.005892 0.000004 0.000004 0.002939 0.008859 0.008847 0.005903 0.000004 2.022306 0.297923 2.102498
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 2.818642
(4: 0.002951, 9: 0.002955, (((((((12: 0.687020, 27: 0.870144): 0.331616, (((15: 0.005780, (28: 0.000004, ((26: 0.000004, 7: 0.000004): 0.002930, 29: 0.000004): 0.000004, 5: 0.005870): 0.014891): 0.042559, 22: 0.037313): 0.093441, 1: 0.086081): 0.052155): 0.055993, 30: 0.188640): 0.183483, 11: 0.013805): 0.025727, 17: 0.003287): 0.002615, 3: 0.000004, 18: 0.002945): 0.020762, 2: 0.008894, (20: 0.005897, 24: 0.000004): 0.008828, ((19: 0.000004, 14: 0.000004): 0.005906, 13: 0.002929): 0.011856, (21: 0.000004, (6: 0.000004, 23: 0.000004): 0.005892, 8: 0.002939): 0.002959, 16: 0.008859, (25: 0.005903, 10: 0.000004): 0.008847): 0.005918);
(C1: 0.002951, C4: 0.002955, (((((((C11: 0.687020, C12: 0.870144): 0.331616, (((C14: 0.005780, (C15: 0.000004, ((C17: 0.000004, C18: 0.000004): 0.002930, C20: 0.000004): 0.000004, C42: 0.005870): 0.014891): 0.042559, C19: 0.037313): 0.093441, C9: 0.086081): 0.052155): 0.055993, C7: 0.188640): 0.183483, C2: 0.013805): 0.025727, C8: 0.003287): 0.002615, C5: 0.000004, C6: 0.002945): 0.020762, C21: 0.008894, (C22: 0.005897, C33: 0.000004): 0.008828, ((C24: 0.000004, C25: 0.000004): 0.005906, C39: 0.002929): 0.011856, (C27: 0.000004, (C29: 0.000004, C32: 0.000004): 0.005892, C31: 0.002939): 0.002959, C3: 0.008859, (C34: 0.005903, C36: 0.000004): 0.008847): 0.005918);
Detailed output identifying parameters
kappa (ts/tv) = 2.02231
Parameters in M7 (beta):
p = 0.29792 q = 2.10250
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00002 0.00067 0.00376 0.01170 0.02757 0.05538 0.10091 0.17385 0.29463 0.53307
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..4 0.003 841.6 235.4 0.1202 0.0004 0.0031 0.3 0.7
31..9 0.003 841.6 235.4 0.1202 0.0004 0.0032 0.3 0.7
31..32 0.006 841.6 235.4 0.1202 0.0008 0.0063 0.6 1.5
32..33 0.021 841.6 235.4 0.1202 0.0027 0.0221 2.2 5.2
33..34 0.003 841.6 235.4 0.1202 0.0003 0.0028 0.3 0.7
34..35 0.026 841.6 235.4 0.1202 0.0033 0.0274 2.8 6.5
35..36 0.183 841.6 235.4 0.1202 0.0235 0.1957 19.8 46.1
36..37 0.056 841.6 235.4 0.1202 0.0072 0.0597 6.0 14.1
37..38 0.332 841.6 235.4 0.1202 0.0425 0.3537 35.8 83.3
38..12 0.687 841.6 235.4 0.1202 0.0881 0.7328 74.1 172.5
38..27 0.870 841.6 235.4 0.1202 0.1115 0.9281 93.9 218.5
37..39 0.052 841.6 235.4 0.1202 0.0067 0.0556 5.6 13.1
39..40 0.093 841.6 235.4 0.1202 0.0120 0.0997 10.1 23.5
40..41 0.043 841.6 235.4 0.1202 0.0055 0.0454 4.6 10.7
41..15 0.006 841.6 235.4 0.1202 0.0007 0.0062 0.6 1.5
41..42 0.015 841.6 235.4 0.1202 0.0019 0.0159 1.6 3.7
42..28 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
42..43 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
43..44 0.003 841.6 235.4 0.1202 0.0004 0.0031 0.3 0.7
44..26 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
44..7 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
43..29 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
42..5 0.006 841.6 235.4 0.1202 0.0008 0.0063 0.6 1.5
40..22 0.037 841.6 235.4 0.1202 0.0048 0.0398 4.0 9.4
39..1 0.086 841.6 235.4 0.1202 0.0110 0.0918 9.3 21.6
36..30 0.189 841.6 235.4 0.1202 0.0242 0.2012 20.3 47.4
35..11 0.014 841.6 235.4 0.1202 0.0018 0.0147 1.5 3.5
34..17 0.003 841.6 235.4 0.1202 0.0004 0.0035 0.4 0.8
33..3 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
33..18 0.003 841.6 235.4 0.1202 0.0004 0.0031 0.3 0.7
32..2 0.009 841.6 235.4 0.1202 0.0011 0.0095 1.0 2.2
32..45 0.009 841.6 235.4 0.1202 0.0011 0.0094 1.0 2.2
45..20 0.006 841.6 235.4 0.1202 0.0008 0.0063 0.6 1.5
45..24 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
32..46 0.012 841.6 235.4 0.1202 0.0015 0.0126 1.3 3.0
46..47 0.006 841.6 235.4 0.1202 0.0008 0.0063 0.6 1.5
47..19 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
47..14 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
46..13 0.003 841.6 235.4 0.1202 0.0004 0.0031 0.3 0.7
32..48 0.003 841.6 235.4 0.1202 0.0004 0.0032 0.3 0.7
48..21 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
48..49 0.006 841.6 235.4 0.1202 0.0008 0.0063 0.6 1.5
49..6 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
49..23 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
48..8 0.003 841.6 235.4 0.1202 0.0004 0.0031 0.3 0.7
32..16 0.009 841.6 235.4 0.1202 0.0011 0.0094 1.0 2.2
32..50 0.009 841.6 235.4 0.1202 0.0011 0.0094 1.0 2.2
50..25 0.006 841.6 235.4 0.1202 0.0008 0.0063 0.6 1.5
50..10 0.000 841.6 235.4 0.1202 0.0000 0.0000 0.0 0.0
Time used: 1:06:52
Model 8: beta&w>1 (11 categories)
TREE # 1: (4, 9, (((((((12, 27), (((15, (28, ((26, 7), 29), 5)), 22), 1)), 30), 11), 17), 3, 18), 2, (20, 24), ((19, 14), 13), (21, (6, 23), 8), 16, (25, 10))); MP score: 572
lnL(ntime: 49 np: 54): -4224.586136 +0.000000
31..4 31..9 31..32 32..33 33..34 34..35 35..36 36..37 37..38 38..12 38..27 37..39 39..40 40..41 41..15 41..42 42..28 42..43 43..44 44..26 44..7 43..29 42..5 40..22 39..1 36..30 35..11 34..17 33..3 33..18 32..2 32..45 45..20 45..24 32..46 46..47 47..19 47..14 46..13 32..48 48..21 48..49 49..6 49..23 48..8 32..16 32..50 50..25 50..10
0.002947 0.002954 0.005916 0.020754 0.002616 0.025784 0.184210 0.056039 0.332753 0.706488 0.889608 0.052744 0.093507 0.042758 0.005783 0.014898 0.000004 0.000004 0.002931 0.000004 0.000004 0.000004 0.005874 0.037250 0.086539 0.189729 0.013730 0.003282 0.000004 0.002943 0.008891 0.008824 0.005895 0.000004 0.011849 0.005902 0.000004 0.000004 0.002927 0.002958 0.000004 0.005892 0.000004 0.000004 0.002938 0.008856 0.008843 0.005901 0.000004 2.046201 0.950919 0.474526 5.042458 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 2.861767
(4: 0.002947, 9: 0.002954, (((((((12: 0.706488, 27: 0.889608): 0.332753, (((15: 0.005783, (28: 0.000004, ((26: 0.000004, 7: 0.000004): 0.002931, 29: 0.000004): 0.000004, 5: 0.005874): 0.014898): 0.042758, 22: 0.037250): 0.093507, 1: 0.086539): 0.052744): 0.056039, 30: 0.189729): 0.184210, 11: 0.013730): 0.025784, 17: 0.003282): 0.002616, 3: 0.000004, 18: 0.002943): 0.020754, 2: 0.008891, (20: 0.005895, 24: 0.000004): 0.008824, ((19: 0.000004, 14: 0.000004): 0.005902, 13: 0.002927): 0.011849, (21: 0.000004, (6: 0.000004, 23: 0.000004): 0.005892, 8: 0.002938): 0.002958, 16: 0.008856, (25: 0.005901, 10: 0.000004): 0.008843): 0.005916);
(C1: 0.002947, C4: 0.002954, (((((((C11: 0.706488, C12: 0.889608): 0.332753, (((C14: 0.005783, (C15: 0.000004, ((C17: 0.000004, C18: 0.000004): 0.002931, C20: 0.000004): 0.000004, C42: 0.005874): 0.014898): 0.042758, C19: 0.037250): 0.093507, C9: 0.086539): 0.052744): 0.056039, C7: 0.189729): 0.184210, C2: 0.013730): 0.025784, C8: 0.003282): 0.002616, C5: 0.000004, C6: 0.002943): 0.020754, C21: 0.008891, (C22: 0.005895, C33: 0.000004): 0.008824, ((C24: 0.000004, C25: 0.000004): 0.005902, C39: 0.002927): 0.011849, (C27: 0.000004, (C29: 0.000004, C32: 0.000004): 0.005892, C31: 0.002938): 0.002958, C3: 0.008856, (C34: 0.005901, C36: 0.000004): 0.008843): 0.005916);
Detailed output identifying parameters
kappa (ts/tv) = 2.04620
Parameters in M8 (beta&w>1):
p0 = 0.95092 p = 0.47453 q = 5.04246
(p1 = 0.04908) w = 1.00000
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09509 0.09509 0.09509 0.09509 0.09509 0.09509 0.09509 0.09509 0.09509 0.09509 0.04908
w: 0.00029 0.00299 0.00893 0.01863 0.03288 0.05295 0.08111 0.12183 0.18620 0.32112 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..4 0.003 841.1 235.9 0.1277 0.0004 0.0031 0.3 0.7
31..9 0.003 841.1 235.9 0.1277 0.0004 0.0031 0.3 0.7
31..32 0.006 841.1 235.9 0.1277 0.0008 0.0062 0.7 1.5
32..33 0.021 841.1 235.9 0.1277 0.0028 0.0217 2.3 5.1
33..34 0.003 841.1 235.9 0.1277 0.0003 0.0027 0.3 0.6
34..35 0.026 841.1 235.9 0.1277 0.0034 0.0270 2.9 6.4
35..36 0.184 841.1 235.9 0.1277 0.0246 0.1926 20.7 45.4
36..37 0.056 841.1 235.9 0.1277 0.0075 0.0586 6.3 13.8
37..38 0.333 841.1 235.9 0.1277 0.0444 0.3480 37.4 82.1
38..12 0.706 841.1 235.9 0.1277 0.0944 0.7388 79.4 174.3
38..27 0.890 841.1 235.9 0.1277 0.1188 0.9303 99.9 219.4
37..39 0.053 841.1 235.9 0.1277 0.0070 0.0552 5.9 13.0
39..40 0.094 841.1 235.9 0.1277 0.0125 0.0978 10.5 23.1
40..41 0.043 841.1 235.9 0.1277 0.0057 0.0447 4.8 10.5
41..15 0.006 841.1 235.9 0.1277 0.0008 0.0060 0.6 1.4
41..42 0.015 841.1 235.9 0.1277 0.0020 0.0156 1.7 3.7
42..28 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
42..43 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
43..44 0.003 841.1 235.9 0.1277 0.0004 0.0031 0.3 0.7
44..26 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
44..7 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
43..29 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
42..5 0.006 841.1 235.9 0.1277 0.0008 0.0061 0.7 1.4
40..22 0.037 841.1 235.9 0.1277 0.0050 0.0390 4.2 9.2
39..1 0.087 841.1 235.9 0.1277 0.0116 0.0905 9.7 21.3
36..30 0.190 841.1 235.9 0.1277 0.0253 0.1984 21.3 46.8
35..11 0.014 841.1 235.9 0.1277 0.0018 0.0144 1.5 3.4
34..17 0.003 841.1 235.9 0.1277 0.0004 0.0034 0.4 0.8
33..3 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
33..18 0.003 841.1 235.9 0.1277 0.0004 0.0031 0.3 0.7
32..2 0.009 841.1 235.9 0.1277 0.0012 0.0093 1.0 2.2
32..45 0.009 841.1 235.9 0.1277 0.0012 0.0092 1.0 2.2
45..20 0.006 841.1 235.9 0.1277 0.0008 0.0062 0.7 1.5
45..24 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
32..46 0.012 841.1 235.9 0.1277 0.0016 0.0124 1.3 2.9
46..47 0.006 841.1 235.9 0.1277 0.0008 0.0062 0.7 1.5
47..19 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
47..14 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
46..13 0.003 841.1 235.9 0.1277 0.0004 0.0031 0.3 0.7
32..48 0.003 841.1 235.9 0.1277 0.0004 0.0031 0.3 0.7
48..21 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
48..49 0.006 841.1 235.9 0.1277 0.0008 0.0062 0.7 1.5
49..6 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
49..23 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
48..8 0.003 841.1 235.9 0.1277 0.0004 0.0031 0.3 0.7
32..16 0.009 841.1 235.9 0.1277 0.0012 0.0093 1.0 2.2
32..50 0.009 841.1 235.9 0.1277 0.0012 0.0092 1.0 2.2
50..25 0.006 841.1 235.9 0.1277 0.0008 0.0062 0.7 1.5
50..10 0.000 841.1 235.9 0.1277 0.0000 0.0000 0.0 0.0
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C9)
Pr(w>1) post mean +- SE for w
9 A 0.715 1.257 +- 0.426
122 S 0.540 1.053 +- 0.525
128 R 0.565 1.105 +- 0.485
132 A 0.919 1.449 +- 0.241
164 S 0.897 1.430 +- 0.268
188 V 0.666 1.207 +- 0.449
208 S 0.588 1.142 +- 0.455
209 Q 0.514 1.036 +- 0.512
232 V 0.768 1.308 +- 0.391
337 S 0.518 1.042 +- 0.510
341 V 0.534 1.082 +- 0.477
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.000 0.019 0.110 0.226 0.265 0.224 0.156
ws: 0.990 0.009 0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000
Time used: 1:52:54
Model 1: NearlyNeutral -4232.072048 Model 2: PositiveSelection -4232.072048 Model 7: beta -4227.299939 Model 8: beta&w>1 -4224.586136 Model 2 vs 1 0 Model 8 vs 7 5.427606
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
