--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1562.43 -1583.22
2 -1560.67 -1585.81
--------------------------------------
TOTAL -1561.21 -1585.19
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.081968 0.000288 0.050991 0.115880 0.080521 1254.98 1266.50 1.000
r(A<->C){all} 0.044003 0.000985 0.000118 0.104838 0.037015 453.83 483.51 1.000
r(A<->G){all} 0.216314 0.003716 0.105845 0.337906 0.212531 491.21 512.36 1.003
r(A<->T){all} 0.040485 0.000459 0.007798 0.085121 0.037011 558.39 661.13 1.000
r(C<->G){all} 0.055545 0.001574 0.000179 0.132064 0.046973 515.48 556.20 1.000
r(C<->T){all} 0.511383 0.006477 0.361200 0.663445 0.510013 526.58 541.90 1.003
r(G<->T){all} 0.132270 0.001928 0.051680 0.216773 0.127196 589.08 620.63 1.001
pi(A){all} 0.279546 0.000221 0.251625 0.309025 0.279353 1168.32 1270.70 1.000
pi(C){all} 0.140072 0.000127 0.118575 0.163144 0.139836 992.11 1196.68 1.000
pi(G){all} 0.225110 0.000183 0.199241 0.251011 0.224672 1224.54 1228.25 1.000
pi(T){all} 0.355272 0.000234 0.324683 0.384299 0.355153 1106.84 1174.64 1.000
alpha{1,2} 0.122639 0.031404 0.000016 0.338551 0.084037 1009.99 1011.89 1.000
alpha{3} 2.412144 1.915873 0.305567 5.199070 2.138361 1246.78 1257.22 1.001
pinvar{all} 0.772129 0.004821 0.637494 0.874974 0.782733 418.22 693.68 1.002
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -1474.627791
Model 2: PositiveSelection -1474.625386
Model 7: beta -1474.647618
Model 8: beta&w>1 -1474.626133
Model 2 vs 1 .004810
Model 8 vs 7 .042970
-- Starting log on Fri Nov 18 14:40:01 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp13_VIPR_ALG4_QEY10630_1_20585_21481_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result--
-- Starting log on Fri Nov 18 14:55:26 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp13_VIPR_ALG4_QEY10630_1_20585_21481_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result--
-- Starting log on Sat Nov 19 02:18:38 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp13_VIPR_ALG4_QEY10630_1_20585_21481_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result/gapped_alignment/codeml,DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp13_VIPR_ALG4_QEY10630_1_20585_21481_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 30 taxa and 897 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C243
Taxon 2 -> C34
Taxon 3 -> C78
Taxon 4 -> C156
Taxon 5 -> C234
Taxon 6 -> C267
Taxon 7 -> C46
Taxon 8 -> C19
Taxon 9 -> C22
Taxon 10 -> C60
Taxon 11 -> C273
Taxon 12 -> C29
Taxon 13 -> C202
Taxon 14 -> C197
Taxon 15 -> C65
Taxon 16 -> C98
Taxon 17 -> C88
Taxon 18 -> C132
Taxon 19 -> C5
Taxon 20 -> C122
Taxon 21 -> C121
Taxon 22 -> C69
Taxon 23 -> C130
Taxon 24 -> C71
Taxon 25 -> C76
Taxon 26 -> C135
Taxon 27 -> C134
Taxon 28 -> C70
Taxon 29 -> C21
Taxon 30 -> C49
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668824320
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1440153716
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 8805626454
Seed = 603745197
Swapseed = 1668824320
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 10 unique site patterns
Division 2 has 5 unique site patterns
Division 3 has 32 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -2904.350066 -- 82.122948
Chain 2 -- -3192.106361 -- 82.122948
Chain 3 -- -3086.467159 -- 82.122948
Chain 4 -- -3118.349807 -- 82.122948
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -3095.135473 -- 82.122948
Chain 2 -- -3067.721941 -- 82.122948
Chain 3 -- -3022.055919 -- 82.122948
Chain 4 -- -3095.121063 -- 82.122948
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-2904.350] (-3192.106) (-3086.467) (-3118.350) * [-3095.135] (-3067.722) (-3022.056) (-3095.121)
1000 -- (-1690.246) [-1642.628] (-1646.582) (-1690.918) * (-1661.560) (-1659.523) (-1645.345) [-1646.027] -- 0:16:39
2000 -- (-1639.444) (-1609.426) [-1599.455] (-1600.904) * (-1615.006) (-1614.176) (-1587.613) [-1589.729] -- 0:16:38
3000 -- (-1584.063) [-1590.070] (-1576.746) (-1584.838) * (-1577.799) (-1620.420) (-1575.489) [-1582.846] -- 0:11:04
4000 -- (-1586.121) (-1578.139) [-1577.396] (-1592.978) * (-1582.289) (-1599.947) (-1585.177) [-1576.666] -- 0:12:27
5000 -- (-1579.736) [-1582.314] (-1578.174) (-1581.941) * (-1588.719) (-1610.948) (-1581.562) [-1582.447] -- 0:09:57
Average standard deviation of split frequencies: 0.078567
6000 -- (-1589.642) [-1586.348] (-1576.640) (-1578.164) * (-1589.897) [-1593.848] (-1588.778) (-1569.671) -- 0:11:02
7000 -- [-1577.209] (-1593.361) (-1577.979) (-1578.787) * (-1585.716) (-1591.625) (-1577.507) [-1574.184] -- 0:09:27
8000 -- [-1573.533] (-1581.147) (-1586.540) (-1587.047) * (-1585.287) (-1589.549) (-1569.230) [-1576.641] -- 0:10:20
9000 -- (-1592.453) (-1601.000) (-1565.328) [-1580.379] * (-1594.286) (-1581.850) (-1579.727) [-1576.790] -- 0:11:00
10000 -- [-1573.690] (-1605.606) (-1596.080) (-1579.944) * (-1582.056) (-1599.160) (-1588.018) [-1578.303] -- 0:09:54
Average standard deviation of split frequencies: 0.053958
11000 -- [-1581.116] (-1606.294) (-1581.605) (-1573.915) * (-1580.663) (-1587.989) [-1560.992] (-1589.282) -- 0:10:29
12000 -- (-1572.540) (-1584.382) (-1581.009) [-1577.407] * (-1579.425) [-1584.457] (-1571.813) (-1592.514) -- 0:09:36
13000 -- [-1573.174] (-1590.154) (-1573.737) (-1584.740) * (-1577.987) [-1578.401] (-1586.976) (-1590.492) -- 0:10:07
14000 -- [-1578.795] (-1576.804) (-1599.087) (-1574.083) * (-1578.231) [-1569.291] (-1579.757) (-1592.800) -- 0:09:23
15000 -- (-1575.491) (-1572.240) (-1610.191) [-1569.222] * (-1574.019) [-1570.979] (-1583.717) (-1590.455) -- 0:09:51
Average standard deviation of split frequencies: 0.058129
16000 -- (-1579.271) (-1581.457) (-1598.338) [-1571.264] * [-1575.598] (-1583.257) (-1584.934) (-1592.481) -- 0:09:13
17000 -- (-1565.210) (-1588.456) (-1577.029) [-1569.132] * (-1577.342) (-1579.020) (-1586.842) [-1577.912] -- 0:09:38
18000 -- (-1578.303) (-1592.492) (-1578.658) [-1576.762] * (-1583.485) [-1586.797] (-1563.907) (-1578.855) -- 0:09:05
19000 -- [-1568.341] (-1580.349) (-1578.719) (-1586.184) * (-1586.968) [-1576.746] (-1592.530) (-1576.417) -- 0:09:27
20000 -- [-1576.651] (-1582.644) (-1577.006) (-1582.162) * (-1576.459) [-1578.184] (-1597.121) (-1575.272) -- 0:08:59
Average standard deviation of split frequencies: 0.044695
21000 -- [-1571.937] (-1586.480) (-1577.218) (-1573.218) * (-1578.428) (-1580.385) (-1579.418) [-1574.011] -- 0:09:19
22000 -- (-1575.973) [-1565.165] (-1572.440) (-1581.117) * (-1598.061) (-1579.203) (-1569.704) [-1576.633] -- 0:09:37
23000 -- (-1591.435) [-1569.941] (-1577.471) (-1580.859) * (-1592.503) [-1574.624] (-1594.434) (-1579.059) -- 0:09:12
24000 -- [-1585.167] (-1567.739) (-1568.550) (-1582.190) * (-1571.186) [-1573.668] (-1591.185) (-1587.459) -- 0:09:29
25000 -- [-1581.498] (-1566.354) (-1583.019) (-1567.724) * (-1583.524) [-1570.427] (-1580.193) (-1587.894) -- 0:09:06
Average standard deviation of split frequencies: 0.038636
26000 -- [-1573.529] (-1564.973) (-1599.439) (-1578.176) * (-1576.927) (-1563.865) [-1567.821] (-1575.508) -- 0:09:21
27000 -- (-1578.216) (-1575.906) [-1571.901] (-1581.271) * [-1570.590] (-1574.519) (-1575.362) (-1596.872) -- 0:09:00
28000 -- [-1575.061] (-1587.348) (-1575.154) (-1559.827) * [-1565.601] (-1580.285) (-1578.258) (-1581.816) -- 0:09:15
29000 -- [-1581.370] (-1581.629) (-1574.668) (-1572.431) * [-1576.163] (-1590.716) (-1571.993) (-1570.613) -- 0:08:55
30000 -- [-1580.018] (-1575.151) (-1600.799) (-1570.458) * [-1573.231] (-1577.613) (-1575.641) (-1568.749) -- 0:09:09
Average standard deviation of split frequencies: 0.038036
31000 -- (-1581.541) (-1580.898) [-1568.469] (-1581.901) * [-1566.412] (-1567.831) (-1606.354) (-1569.788) -- 0:08:51
32000 -- [-1574.514] (-1584.590) (-1592.050) (-1562.115) * (-1565.124) [-1578.926] (-1608.639) (-1583.030) -- 0:09:04
33000 -- [-1579.050] (-1582.189) (-1577.173) (-1574.309) * [-1571.483] (-1569.791) (-1589.298) (-1580.744) -- 0:08:47
34000 -- (-1579.351) (-1596.922) [-1570.179] (-1569.482) * (-1581.775) [-1578.805] (-1573.579) (-1567.611) -- 0:08:59
35000 -- (-1574.845) (-1581.761) [-1569.211] (-1590.513) * (-1575.685) (-1577.061) [-1558.964] (-1581.572) -- 0:08:43
Average standard deviation of split frequencies: 0.037101
36000 -- [-1566.787] (-1586.791) (-1570.795) (-1591.417) * (-1587.346) (-1571.092) [-1565.378] (-1584.166) -- 0:08:55
37000 -- (-1578.601) (-1588.061) [-1571.069] (-1580.048) * (-1579.902) [-1570.567] (-1567.781) (-1585.238) -- 0:08:40
38000 -- (-1579.704) (-1581.418) [-1561.940] (-1589.467) * (-1591.821) (-1573.297) (-1575.981) [-1567.378] -- 0:08:51
39000 -- (-1585.988) [-1568.222] (-1566.167) (-1593.217) * (-1587.148) (-1586.750) (-1575.196) [-1565.218] -- 0:09:02
40000 -- [-1576.343] (-1574.584) (-1586.326) (-1584.706) * (-1586.920) (-1574.282) (-1595.151) [-1566.619] -- 0:08:48
Average standard deviation of split frequencies: 0.031016
41000 -- (-1572.566) (-1586.961) [-1580.791] (-1589.874) * (-1584.930) [-1560.880] (-1589.446) (-1571.244) -- 0:08:57
42000 -- (-1572.515) (-1571.477) [-1573.376] (-1582.075) * [-1567.591] (-1574.986) (-1588.598) (-1565.279) -- 0:08:44
43000 -- (-1576.580) [-1573.956] (-1583.013) (-1582.750) * [-1562.342] (-1579.915) (-1602.643) (-1570.229) -- 0:08:54
44000 -- (-1573.177) [-1570.938] (-1581.666) (-1595.751) * (-1568.784) [-1570.760] (-1588.086) (-1586.750) -- 0:08:41
45000 -- [-1571.224] (-1578.902) (-1587.786) (-1583.353) * (-1573.760) [-1566.836] (-1567.478) (-1582.216) -- 0:08:50
Average standard deviation of split frequencies: 0.028694
46000 -- (-1587.753) (-1580.065) [-1569.710] (-1579.787) * [-1577.953] (-1575.071) (-1582.912) (-1586.998) -- 0:08:38
47000 -- [-1571.181] (-1573.550) (-1578.914) (-1602.025) * (-1575.290) (-1572.889) (-1575.619) [-1568.716] -- 0:08:47
48000 -- (-1591.672) (-1565.990) [-1568.848] (-1585.297) * (-1587.415) (-1580.037) (-1587.798) [-1572.114] -- 0:08:35
49000 -- (-1582.328) [-1579.916] (-1591.912) (-1607.454) * (-1614.170) (-1570.071) (-1594.724) [-1579.530] -- 0:08:44
50000 -- (-1576.882) (-1581.865) [-1566.944] (-1589.668) * (-1587.006) (-1576.355) (-1584.393) [-1570.404] -- 0:08:52
Average standard deviation of split frequencies: 0.027550
51000 -- (-1586.845) (-1575.774) [-1567.860] (-1580.104) * (-1597.589) [-1564.728] (-1595.020) (-1570.643) -- 0:08:41
52000 -- (-1571.042) (-1585.682) [-1565.963] (-1583.794) * (-1569.855) (-1581.238) (-1576.157) [-1573.879] -- 0:08:48
53000 -- (-1581.745) (-1583.198) [-1564.951] (-1589.484) * (-1568.774) (-1586.472) (-1579.962) [-1567.346] -- 0:08:38
54000 -- (-1582.609) (-1569.832) [-1571.389] (-1589.228) * (-1575.808) [-1565.607] (-1571.525) (-1568.350) -- 0:08:45
55000 -- [-1566.265] (-1581.471) (-1582.684) (-1576.665) * (-1598.216) (-1578.632) [-1572.471] (-1574.496) -- 0:08:35
Average standard deviation of split frequencies: 0.023346
56000 -- [-1563.959] (-1585.145) (-1583.102) (-1582.302) * (-1590.000) (-1595.145) (-1582.242) [-1566.453] -- 0:08:42
57000 -- [-1561.548] (-1581.983) (-1571.748) (-1577.972) * (-1588.165) (-1594.180) (-1581.005) [-1569.989] -- 0:08:32
58000 -- (-1575.097) (-1589.393) [-1571.600] (-1571.747) * (-1580.044) (-1575.882) [-1579.764] (-1581.134) -- 0:08:39
59000 -- [-1570.739] (-1570.933) (-1572.637) (-1583.795) * (-1571.384) [-1577.479] (-1587.689) (-1591.382) -- 0:08:46
60000 -- (-1570.580) [-1565.638] (-1595.575) (-1586.165) * (-1589.420) (-1576.317) [-1573.361] (-1566.627) -- 0:08:37
Average standard deviation of split frequencies: 0.022873
61000 -- (-1582.165) [-1561.997] (-1591.750) (-1573.231) * (-1584.669) (-1561.541) (-1567.536) [-1574.060] -- 0:08:43
62000 -- [-1571.279] (-1583.946) (-1582.192) (-1575.641) * (-1572.691) (-1578.324) (-1587.861) [-1574.560] -- 0:08:34
63000 -- (-1575.910) [-1565.142] (-1563.241) (-1596.151) * [-1564.289] (-1581.095) (-1607.821) (-1572.981) -- 0:08:40
64000 -- (-1570.287) (-1572.118) [-1576.521] (-1610.354) * [-1571.825] (-1575.386) (-1586.268) (-1576.502) -- 0:08:31
65000 -- (-1560.350) [-1562.549] (-1587.446) (-1599.675) * (-1604.642) (-1569.726) (-1577.559) [-1565.879] -- 0:08:37
Average standard deviation of split frequencies: 0.023401
66000 -- (-1571.601) (-1585.124) [-1563.946] (-1578.421) * (-1596.255) (-1576.438) (-1573.891) [-1558.885] -- 0:08:29
67000 -- (-1579.171) (-1605.217) (-1577.181) [-1573.635] * (-1607.662) (-1571.196) (-1584.498) [-1568.543] -- 0:08:35
68000 -- (-1575.856) (-1586.680) (-1574.394) [-1565.110] * (-1581.777) (-1600.864) (-1574.761) [-1565.516] -- 0:08:27
69000 -- (-1581.418) (-1568.941) [-1568.359] (-1585.709) * (-1593.663) (-1586.206) (-1573.571) [-1567.541] -- 0:08:32
70000 -- (-1592.838) (-1557.679) [-1579.594] (-1587.665) * (-1568.411) (-1583.130) (-1578.500) [-1562.711] -- 0:08:38
Average standard deviation of split frequencies: 0.021840
71000 -- [-1574.660] (-1573.353) (-1573.732) (-1582.658) * (-1563.770) (-1577.796) [-1580.205] (-1589.795) -- 0:08:30
72000 -- (-1583.674) (-1570.591) (-1581.965) [-1586.825] * [-1568.660] (-1575.395) (-1579.855) (-1583.304) -- 0:08:35
73000 -- (-1571.469) [-1560.095] (-1585.438) (-1576.388) * (-1563.322) [-1565.046] (-1586.203) (-1572.745) -- 0:08:27
74000 -- (-1569.388) (-1574.257) (-1585.062) [-1585.707] * (-1574.690) (-1568.490) (-1579.909) [-1572.651] -- 0:08:33
75000 -- [-1580.453] (-1585.512) (-1564.850) (-1592.994) * [-1567.289] (-1568.980) (-1569.722) (-1598.168) -- 0:08:25
Average standard deviation of split frequencies: 0.021436
76000 -- (-1569.037) (-1575.968) (-1582.609) [-1576.356] * (-1582.880) [-1561.795] (-1579.455) (-1583.648) -- 0:08:30
77000 -- (-1573.038) (-1594.471) (-1574.213) [-1565.684] * (-1570.046) [-1573.779] (-1567.778) (-1582.349) -- 0:08:23
78000 -- (-1584.302) (-1572.809) [-1574.554] (-1586.289) * (-1579.652) (-1570.913) (-1583.625) [-1573.237] -- 0:08:28
79000 -- (-1592.509) [-1570.735] (-1583.312) (-1591.016) * (-1572.748) (-1576.299) [-1575.932] (-1597.264) -- 0:08:21
80000 -- (-1609.753) (-1579.110) [-1575.033] (-1568.779) * (-1577.690) (-1572.150) [-1576.090] (-1589.765) -- 0:08:26
Average standard deviation of split frequencies: 0.020180
81000 -- (-1593.680) (-1566.893) [-1572.877] (-1568.078) * (-1583.065) [-1580.485] (-1596.617) (-1578.160) -- 0:08:30
82000 -- (-1579.906) (-1584.707) (-1573.246) [-1567.963] * (-1572.233) [-1579.406] (-1586.010) (-1585.781) -- 0:08:23
83000 -- (-1583.523) (-1591.170) [-1569.961] (-1565.449) * (-1578.037) [-1572.236] (-1574.491) (-1589.472) -- 0:08:28
84000 -- (-1578.938) (-1590.831) [-1570.920] (-1583.426) * (-1598.964) [-1568.791] (-1563.327) (-1592.725) -- 0:08:21
85000 -- (-1566.553) [-1576.131] (-1578.538) (-1576.263) * [-1564.021] (-1575.435) (-1577.695) (-1589.102) -- 0:08:25
Average standard deviation of split frequencies: 0.020327
86000 -- (-1576.051) [-1565.329] (-1609.662) (-1583.477) * (-1584.508) [-1569.647] (-1569.563) (-1571.756) -- 0:08:19
87000 -- (-1571.953) [-1562.656] (-1587.006) (-1576.512) * (-1578.831) (-1595.592) (-1580.875) [-1572.148] -- 0:08:23
88000 -- (-1572.796) [-1563.375] (-1579.324) (-1585.368) * (-1589.276) (-1606.527) [-1576.153] (-1575.853) -- 0:08:17
89000 -- (-1572.122) [-1571.188] (-1579.016) (-1580.299) * (-1574.324) (-1582.204) [-1575.747] (-1573.892) -- 0:08:21
90000 -- (-1562.997) [-1577.034] (-1572.163) (-1588.068) * [-1565.613] (-1587.844) (-1578.953) (-1585.519) -- 0:08:15
Average standard deviation of split frequencies: 0.019406
91000 -- (-1573.498) [-1562.579] (-1579.574) (-1571.453) * (-1575.204) (-1584.340) [-1580.165] (-1587.000) -- 0:08:19
92000 -- (-1569.020) [-1571.732] (-1589.982) (-1581.010) * (-1600.172) (-1567.268) (-1580.549) [-1576.237] -- 0:08:23
93000 -- (-1573.225) (-1577.276) (-1576.315) [-1577.993] * (-1575.166) (-1572.956) [-1580.378] (-1597.369) -- 0:08:17
94000 -- (-1587.609) (-1594.950) (-1569.547) [-1563.024] * [-1559.760] (-1593.099) (-1580.169) (-1567.655) -- 0:08:21
95000 -- (-1568.259) (-1589.825) (-1580.510) [-1570.105] * (-1595.088) (-1580.273) [-1577.946] (-1579.138) -- 0:08:15
Average standard deviation of split frequencies: 0.019144
96000 -- (-1589.065) (-1578.905) [-1571.613] (-1584.963) * (-1594.755) [-1572.469] (-1582.285) (-1572.125) -- 0:08:19
97000 -- (-1570.277) (-1571.166) (-1562.632) [-1565.453] * (-1568.931) (-1574.903) (-1579.789) [-1571.511] -- 0:08:13
98000 -- [-1576.964] (-1564.768) (-1572.823) (-1587.063) * [-1569.774] (-1581.703) (-1576.714) (-1575.262) -- 0:08:17
99000 -- (-1582.103) (-1576.533) (-1574.092) [-1568.165] * [-1566.804] (-1576.136) (-1585.378) (-1587.024) -- 0:08:11
100000 -- (-1594.554) (-1566.489) (-1576.441) [-1571.021] * [-1574.819] (-1578.146) (-1574.566) (-1585.414) -- 0:08:15
Average standard deviation of split frequencies: 0.019076
101000 -- (-1578.574) (-1584.052) (-1573.299) [-1570.219] * (-1581.797) (-1577.731) (-1577.466) [-1579.637] -- 0:08:09
102000 -- [-1573.107] (-1583.046) (-1602.012) (-1574.953) * (-1608.301) (-1562.656) [-1575.256] (-1585.520) -- 0:08:13
103000 -- [-1574.659] (-1593.671) (-1575.155) (-1578.204) * (-1587.469) [-1565.537] (-1579.318) (-1564.712) -- 0:08:16
104000 -- (-1564.581) (-1582.173) (-1585.367) [-1565.056] * (-1579.951) [-1570.941] (-1574.045) (-1585.183) -- 0:08:11
105000 -- (-1601.004) [-1567.424] (-1572.008) (-1586.763) * (-1584.386) (-1569.583) [-1567.505] (-1589.160) -- 0:08:14
Average standard deviation of split frequencies: 0.017362
106000 -- [-1569.756] (-1580.900) (-1571.072) (-1579.211) * (-1573.032) [-1559.868] (-1578.315) (-1565.345) -- 0:08:09
107000 -- [-1573.786] (-1581.855) (-1570.372) (-1577.155) * (-1567.985) (-1573.185) [-1561.307] (-1569.698) -- 0:08:12
108000 -- (-1581.633) (-1592.895) (-1583.854) [-1572.770] * (-1587.521) (-1593.303) (-1577.051) [-1561.049] -- 0:08:07
109000 -- (-1580.500) (-1572.372) [-1572.612] (-1577.910) * (-1589.259) (-1582.187) (-1575.074) [-1565.270] -- 0:08:10
110000 -- (-1579.120) [-1564.665] (-1580.293) (-1571.984) * (-1579.611) [-1574.810] (-1590.273) (-1573.204) -- 0:08:05
Average standard deviation of split frequencies: 0.016919
111000 -- [-1564.557] (-1574.447) (-1587.099) (-1570.749) * (-1573.452) (-1574.988) [-1572.026] (-1588.808) -- 0:08:08
112000 -- (-1575.379) [-1562.455] (-1564.508) (-1574.344) * (-1591.143) (-1582.481) (-1576.109) [-1574.371] -- 0:08:03
113000 -- (-1596.394) (-1585.298) (-1570.490) [-1569.609] * (-1592.634) [-1571.480] (-1583.676) (-1566.292) -- 0:08:06
114000 -- (-1578.589) (-1575.598) (-1569.749) [-1571.280] * [-1566.784] (-1574.768) (-1585.953) (-1567.210) -- 0:08:01
115000 -- (-1577.129) (-1587.525) (-1571.805) [-1570.303] * [-1570.907] (-1568.526) (-1588.008) (-1598.125) -- 0:08:04
Average standard deviation of split frequencies: 0.016255
116000 -- (-1599.574) (-1574.287) (-1579.705) [-1558.422] * (-1568.657) [-1584.351] (-1577.731) (-1587.227) -- 0:08:07
117000 -- (-1589.584) (-1568.523) (-1566.910) [-1563.520] * (-1570.581) [-1572.314] (-1587.546) (-1585.477) -- 0:08:03
118000 -- (-1588.430) [-1561.198] (-1575.966) (-1579.708) * (-1570.955) [-1568.404] (-1589.198) (-1591.492) -- 0:08:05
119000 -- [-1579.774] (-1565.128) (-1570.920) (-1584.692) * (-1572.982) [-1569.316] (-1577.628) (-1578.679) -- 0:08:01
120000 -- (-1578.460) [-1570.207] (-1573.422) (-1585.199) * (-1581.602) (-1586.062) [-1573.426] (-1570.180) -- 0:08:04
Average standard deviation of split frequencies: 0.016023
121000 -- (-1577.809) (-1584.588) (-1567.428) [-1568.648] * (-1573.514) (-1593.109) [-1564.257] (-1575.081) -- 0:07:59
122000 -- (-1588.647) (-1582.674) [-1562.270] (-1590.987) * (-1595.309) [-1570.228] (-1590.286) (-1570.598) -- 0:08:02
123000 -- (-1600.975) [-1563.503] (-1573.130) (-1586.251) * (-1576.151) (-1583.646) (-1588.044) [-1567.443] -- 0:07:57
124000 -- (-1603.196) [-1581.463] (-1576.654) (-1581.165) * (-1570.703) (-1591.809) (-1587.384) [-1575.583] -- 0:08:00
125000 -- (-1591.680) (-1579.787) [-1566.637] (-1583.687) * (-1581.496) [-1579.023] (-1611.551) (-1581.949) -- 0:07:56
Average standard deviation of split frequencies: 0.015553
126000 -- [-1573.221] (-1575.264) (-1573.438) (-1599.959) * (-1566.476) [-1572.832] (-1570.002) (-1574.354) -- 0:07:58
127000 -- (-1580.314) [-1567.851] (-1575.506) (-1608.739) * (-1571.123) (-1586.276) (-1574.778) [-1567.041] -- 0:07:54
128000 -- (-1593.472) [-1571.478] (-1572.297) (-1584.091) * (-1567.746) (-1593.882) [-1569.862] (-1576.940) -- 0:07:56
129000 -- [-1567.986] (-1580.709) (-1576.980) (-1576.111) * (-1573.645) (-1562.762) (-1588.473) [-1564.086] -- 0:07:59
130000 -- (-1602.813) [-1570.521] (-1574.516) (-1578.986) * [-1563.776] (-1590.640) (-1576.825) (-1580.876) -- 0:07:55
Average standard deviation of split frequencies: 0.016134
131000 -- (-1601.395) (-1588.296) (-1584.560) [-1566.689] * [-1566.537] (-1584.771) (-1569.525) (-1570.830) -- 0:07:57
132000 -- (-1599.830) (-1592.651) [-1570.256] (-1563.082) * [-1573.880] (-1572.010) (-1578.975) (-1587.314) -- 0:07:53
133000 -- [-1576.114] (-1594.675) (-1583.045) (-1571.019) * (-1603.121) (-1570.221) (-1567.539) [-1572.429] -- 0:07:55
134000 -- [-1568.211] (-1571.561) (-1578.095) (-1577.832) * (-1588.763) (-1579.165) (-1572.417) [-1567.261] -- 0:07:51
135000 -- (-1582.578) [-1561.929] (-1589.624) (-1567.372) * (-1572.435) (-1584.217) (-1577.862) [-1567.558] -- 0:07:54
Average standard deviation of split frequencies: 0.016979
136000 -- (-1578.688) [-1571.405] (-1581.427) (-1576.557) * [-1567.796] (-1577.794) (-1580.043) (-1578.989) -- 0:07:50
137000 -- (-1573.408) [-1569.349] (-1578.304) (-1575.952) * (-1592.932) (-1570.865) (-1575.039) [-1576.323] -- 0:07:52
138000 -- (-1573.672) [-1576.157] (-1588.788) (-1587.538) * (-1571.611) (-1568.163) [-1567.054] (-1581.401) -- 0:07:48
139000 -- (-1577.912) [-1572.021] (-1583.171) (-1578.883) * [-1563.844] (-1579.233) (-1589.865) (-1581.253) -- 0:07:50
140000 -- (-1581.596) [-1569.038] (-1592.873) (-1571.517) * [-1572.049] (-1573.549) (-1577.480) (-1578.168) -- 0:07:46
Average standard deviation of split frequencies: 0.017145
141000 -- (-1567.382) [-1571.053] (-1593.752) (-1571.496) * (-1581.649) (-1585.846) [-1567.402] (-1571.178) -- 0:07:49
142000 -- (-1607.021) [-1560.413] (-1580.765) (-1585.191) * (-1605.663) (-1569.481) [-1566.153] (-1586.355) -- 0:07:51
143000 -- (-1594.443) [-1572.144] (-1572.401) (-1580.211) * (-1592.544) [-1570.084] (-1576.331) (-1579.892) -- 0:07:47
144000 -- (-1586.392) (-1580.932) [-1572.307] (-1569.797) * (-1569.969) [-1569.137] (-1584.754) (-1576.525) -- 0:07:49
145000 -- (-1579.419) [-1572.649] (-1582.476) (-1573.834) * (-1585.990) [-1573.376] (-1573.120) (-1578.711) -- 0:07:45
Average standard deviation of split frequencies: 0.017436
146000 -- (-1586.161) (-1574.660) (-1588.144) [-1569.439] * (-1593.817) (-1572.204) [-1568.827] (-1586.179) -- 0:07:47
147000 -- (-1580.288) (-1589.507) (-1575.293) [-1569.120] * (-1586.040) (-1568.724) (-1580.073) [-1571.885] -- 0:07:44
148000 -- (-1577.561) (-1586.816) [-1572.232] (-1579.107) * (-1586.263) (-1570.101) [-1564.147] (-1576.440) -- 0:07:46
149000 -- (-1564.255) (-1586.085) (-1579.972) [-1568.016] * (-1582.471) (-1569.548) [-1572.319] (-1586.129) -- 0:07:42
150000 -- (-1575.260) (-1586.473) [-1564.698] (-1581.067) * [-1574.206] (-1580.803) (-1587.832) (-1575.260) -- 0:07:44
Average standard deviation of split frequencies: 0.017325
151000 -- (-1571.001) (-1572.428) (-1585.578) [-1571.772] * [-1575.348] (-1569.089) (-1565.740) (-1588.646) -- 0:07:41
152000 -- (-1567.189) [-1578.901] (-1594.660) (-1584.021) * (-1584.171) (-1580.247) [-1583.705] (-1585.568) -- 0:07:43
153000 -- [-1562.587] (-1578.306) (-1591.148) (-1576.342) * (-1586.367) [-1578.370] (-1578.543) (-1575.954) -- 0:07:39
154000 -- (-1577.888) [-1570.280] (-1573.174) (-1593.754) * (-1584.065) [-1564.198] (-1593.771) (-1585.716) -- 0:07:41
155000 -- (-1579.568) [-1571.137] (-1596.093) (-1587.409) * (-1596.738) [-1571.704] (-1588.086) (-1593.125) -- 0:07:43
Average standard deviation of split frequencies: 0.017719
156000 -- (-1598.165) (-1580.543) (-1577.571) [-1569.732] * [-1581.652] (-1570.341) (-1593.499) (-1574.316) -- 0:07:39
157000 -- (-1589.844) [-1572.352] (-1570.729) (-1580.051) * (-1593.421) [-1572.448] (-1589.301) (-1580.219) -- 0:07:41
158000 -- (-1582.555) [-1564.147] (-1580.812) (-1568.446) * [-1573.858] (-1565.781) (-1574.380) (-1587.574) -- 0:07:38
159000 -- (-1573.115) (-1572.010) (-1580.084) [-1570.937] * [-1574.224] (-1560.831) (-1586.426) (-1567.187) -- 0:07:40
160000 -- [-1570.338] (-1572.451) (-1588.265) (-1580.187) * [-1569.612] (-1567.070) (-1578.522) (-1579.929) -- 0:07:36
Average standard deviation of split frequencies: 0.016656
161000 -- (-1585.068) (-1566.258) [-1571.650] (-1576.849) * [-1577.710] (-1584.530) (-1572.371) (-1580.674) -- 0:07:38
162000 -- (-1592.908) (-1575.886) [-1563.115] (-1574.233) * [-1570.091] (-1578.907) (-1564.392) (-1568.075) -- 0:07:35
163000 -- (-1596.708) (-1579.286) [-1571.076] (-1573.072) * (-1571.379) [-1569.416] (-1570.001) (-1570.933) -- 0:07:37
164000 -- (-1579.719) (-1590.809) [-1575.774] (-1563.934) * (-1577.162) (-1576.824) [-1576.329] (-1578.594) -- 0:07:33
165000 -- (-1571.453) (-1597.680) [-1573.541] (-1565.872) * [-1569.155] (-1588.784) (-1576.554) (-1570.576) -- 0:07:35
Average standard deviation of split frequencies: 0.017582
166000 -- (-1575.936) (-1593.274) (-1574.440) [-1575.179] * [-1568.709] (-1568.280) (-1589.479) (-1573.621) -- 0:07:37
167000 -- [-1573.946] (-1594.219) (-1577.310) (-1575.110) * [-1570.644] (-1578.166) (-1571.878) (-1572.886) -- 0:07:33
168000 -- (-1576.837) (-1585.651) [-1572.159] (-1590.673) * (-1573.033) [-1572.092] (-1581.959) (-1590.918) -- 0:07:35
169000 -- (-1569.315) (-1580.824) [-1569.609] (-1576.093) * (-1578.241) (-1565.952) (-1588.535) [-1563.783] -- 0:07:32
170000 -- (-1573.245) (-1586.601) [-1575.639] (-1582.206) * (-1575.863) [-1578.378] (-1578.551) (-1577.900) -- 0:07:34
Average standard deviation of split frequencies: 0.016810
171000 -- (-1587.600) [-1574.725] (-1587.816) (-1566.038) * [-1576.934] (-1573.619) (-1580.738) (-1579.996) -- 0:07:30
172000 -- (-1573.679) (-1577.727) (-1599.827) [-1573.370] * [-1578.134] (-1582.769) (-1603.230) (-1565.608) -- 0:07:32
173000 -- (-1575.255) (-1583.042) (-1583.221) [-1575.644] * (-1580.818) (-1594.816) (-1571.903) [-1563.679] -- 0:07:29
174000 -- (-1572.178) [-1570.296] (-1590.353) (-1570.423) * (-1586.397) (-1582.758) [-1580.266] (-1579.977) -- 0:07:30
175000 -- [-1569.339] (-1592.149) (-1579.513) (-1575.382) * (-1584.739) (-1576.401) (-1568.319) [-1564.105] -- 0:07:27
Average standard deviation of split frequencies: 0.015868
176000 -- (-1601.990) (-1566.960) (-1572.935) [-1567.040] * (-1587.298) (-1564.301) (-1596.145) [-1565.724] -- 0:07:29
177000 -- (-1585.395) (-1568.292) [-1569.330] (-1585.237) * (-1577.923) (-1571.335) (-1587.778) [-1567.377] -- 0:07:26
178000 -- (-1572.386) (-1576.488) (-1577.890) [-1574.037] * (-1575.847) (-1575.637) (-1583.533) [-1568.688] -- 0:07:27
179000 -- (-1587.152) (-1573.232) (-1572.003) [-1569.157] * [-1566.718] (-1576.146) (-1580.711) (-1583.367) -- 0:07:29
180000 -- (-1578.145) (-1587.406) [-1571.094] (-1582.187) * [-1572.005] (-1589.136) (-1575.680) (-1592.206) -- 0:07:26
Average standard deviation of split frequencies: 0.015053
181000 -- (-1582.026) (-1570.308) [-1569.531] (-1589.171) * (-1566.966) (-1582.065) (-1586.478) [-1573.340] -- 0:07:27
182000 -- [-1569.266] (-1574.186) (-1573.121) (-1596.989) * [-1564.734] (-1574.371) (-1583.214) (-1579.750) -- 0:07:24
183000 -- (-1574.504) [-1577.994] (-1571.055) (-1586.351) * [-1571.763] (-1573.345) (-1576.415) (-1600.526) -- 0:07:26
184000 -- (-1581.059) (-1575.180) [-1572.495] (-1573.023) * [-1570.302] (-1579.818) (-1568.606) (-1596.215) -- 0:07:23
185000 -- (-1584.954) (-1581.014) [-1583.327] (-1566.203) * (-1590.474) [-1568.015] (-1577.042) (-1588.756) -- 0:07:24
Average standard deviation of split frequencies: 0.013883
186000 -- (-1576.914) (-1570.680) [-1561.823] (-1575.898) * (-1579.019) (-1573.664) (-1564.052) [-1565.027] -- 0:07:22
187000 -- (-1578.055) (-1604.300) [-1564.089] (-1575.505) * [-1582.465] (-1588.695) (-1560.361) (-1573.644) -- 0:07:23
188000 -- [-1568.099] (-1578.565) (-1569.787) (-1588.950) * [-1575.190] (-1609.827) (-1566.824) (-1588.122) -- 0:07:20
189000 -- (-1595.040) [-1556.676] (-1568.954) (-1584.045) * (-1577.615) (-1580.147) [-1571.839] (-1584.635) -- 0:07:21
190000 -- [-1570.257] (-1578.996) (-1571.235) (-1586.947) * (-1580.003) [-1563.105] (-1567.561) (-1578.505) -- 0:07:23
Average standard deviation of split frequencies: 0.014170
191000 -- (-1566.714) (-1580.583) [-1561.126] (-1589.646) * [-1582.617] (-1579.621) (-1579.038) (-1588.087) -- 0:07:20
192000 -- (-1577.736) (-1577.919) [-1563.003] (-1598.542) * [-1576.968] (-1590.082) (-1575.212) (-1577.545) -- 0:07:21
193000 -- (-1583.390) [-1571.148] (-1571.431) (-1573.079) * (-1574.238) (-1580.765) [-1574.733] (-1584.841) -- 0:07:19
194000 -- (-1584.474) [-1575.772] (-1568.639) (-1576.142) * (-1576.638) [-1572.341] (-1591.182) (-1580.312) -- 0:07:20
195000 -- (-1581.194) [-1561.686] (-1582.286) (-1576.715) * [-1571.284] (-1603.070) (-1568.906) (-1587.152) -- 0:07:17
Average standard deviation of split frequencies: 0.014243
196000 -- (-1576.515) [-1565.618] (-1579.396) (-1581.704) * (-1576.364) (-1588.992) [-1571.778] (-1577.795) -- 0:07:18
197000 -- (-1589.777) (-1582.341) (-1573.873) [-1579.878] * [-1569.702] (-1585.584) (-1587.319) (-1571.501) -- 0:07:16
198000 -- [-1571.445] (-1567.912) (-1583.531) (-1583.901) * (-1582.272) (-1579.444) [-1577.262] (-1569.300) -- 0:07:17
199000 -- (-1583.714) (-1572.301) [-1573.798] (-1587.023) * (-1600.405) (-1574.615) (-1587.780) [-1570.993] -- 0:07:14
200000 -- (-1570.527) (-1572.567) (-1596.926) [-1577.220] * (-1576.703) (-1573.704) [-1566.459] (-1585.628) -- 0:07:16
Average standard deviation of split frequencies: 0.014279
201000 -- (-1576.480) [-1579.779] (-1577.736) (-1572.689) * (-1588.236) [-1578.639] (-1579.396) (-1588.069) -- 0:07:17
202000 -- (-1604.734) (-1577.640) (-1568.294) [-1561.903] * (-1601.180) [-1571.738] (-1567.469) (-1585.691) -- 0:07:14
203000 -- (-1580.321) (-1580.795) [-1569.124] (-1579.754) * (-1581.037) (-1570.706) [-1564.378] (-1571.985) -- 0:07:15
204000 -- (-1585.689) (-1593.508) (-1576.370) [-1566.699] * [-1583.637] (-1596.484) (-1571.064) (-1579.643) -- 0:07:13
205000 -- (-1567.970) (-1587.352) (-1574.742) [-1581.315] * (-1591.607) (-1582.578) [-1567.892] (-1580.878) -- 0:07:14
Average standard deviation of split frequencies: 0.013594
206000 -- [-1579.373] (-1573.203) (-1574.951) (-1571.252) * (-1587.496) (-1585.131) (-1565.900) [-1567.929] -- 0:07:11
207000 -- (-1575.033) (-1564.722) (-1576.229) [-1572.824] * (-1588.698) (-1565.005) [-1575.090] (-1570.717) -- 0:07:12
208000 -- [-1576.557] (-1566.216) (-1582.344) (-1580.662) * (-1578.964) (-1569.689) (-1569.663) [-1560.981] -- 0:07:10
209000 -- (-1585.765) (-1574.763) [-1565.784] (-1578.087) * (-1591.822) (-1570.514) [-1571.110] (-1579.265) -- 0:07:11
210000 -- (-1574.684) [-1569.583] (-1572.117) (-1593.211) * (-1574.522) (-1582.371) (-1572.649) [-1574.822] -- 0:07:08
Average standard deviation of split frequencies: 0.013087
211000 -- [-1561.592] (-1575.588) (-1573.789) (-1575.001) * [-1574.016] (-1571.949) (-1593.308) (-1574.610) -- 0:07:10
212000 -- (-1575.880) (-1581.836) (-1591.982) [-1583.454] * (-1598.037) (-1587.684) (-1572.125) [-1574.551] -- 0:07:11
213000 -- (-1584.028) [-1571.590] (-1588.759) (-1588.306) * (-1594.670) (-1560.636) (-1588.926) [-1580.308] -- 0:07:08
214000 -- (-1574.222) [-1568.798] (-1582.569) (-1572.253) * (-1586.236) [-1575.951] (-1570.112) (-1581.505) -- 0:07:09
215000 -- (-1568.094) [-1570.805] (-1581.716) (-1586.167) * (-1599.956) (-1571.836) (-1577.103) [-1567.391] -- 0:07:07
Average standard deviation of split frequencies: 0.012565
216000 -- [-1566.754] (-1591.790) (-1570.816) (-1569.595) * (-1589.458) (-1578.178) [-1575.485] (-1576.424) -- 0:07:08
217000 -- [-1573.263] (-1594.642) (-1594.547) (-1575.381) * (-1596.532) (-1577.957) (-1576.460) [-1570.690] -- 0:07:05
218000 -- (-1579.017) (-1589.288) (-1582.637) [-1572.859] * (-1585.631) [-1575.398] (-1565.365) (-1563.996) -- 0:07:06
219000 -- (-1584.179) (-1595.798) (-1579.062) [-1572.329] * (-1574.785) (-1584.600) [-1564.141] (-1571.926) -- 0:07:04
220000 -- (-1568.652) (-1594.465) [-1568.362] (-1577.651) * (-1579.020) [-1572.348] (-1579.535) (-1576.192) -- 0:07:05
Average standard deviation of split frequencies: 0.012850
221000 -- (-1574.409) (-1600.814) [-1567.999] (-1587.883) * [-1568.346] (-1595.271) (-1566.298) (-1567.202) -- 0:07:06
222000 -- (-1582.593) (-1586.268) (-1584.044) [-1570.560] * [-1576.680] (-1574.644) (-1570.603) (-1579.727) -- 0:07:04
223000 -- [-1580.367] (-1585.100) (-1575.833) (-1570.657) * (-1585.011) (-1578.454) [-1555.330] (-1573.848) -- 0:07:05
224000 -- [-1580.630] (-1596.214) (-1569.653) (-1577.274) * (-1583.295) [-1569.972] (-1569.005) (-1579.084) -- 0:07:02
225000 -- (-1574.700) (-1582.640) (-1577.516) [-1566.274] * (-1580.741) [-1569.446] (-1579.764) (-1587.843) -- 0:07:03
Average standard deviation of split frequencies: 0.012366
226000 -- [-1566.673] (-1587.417) (-1579.407) (-1571.991) * [-1565.190] (-1565.864) (-1572.751) (-1579.951) -- 0:07:01
227000 -- (-1567.719) (-1580.927) [-1571.376] (-1582.165) * (-1568.159) (-1592.715) (-1573.877) [-1566.687] -- 0:07:02
228000 -- (-1568.025) (-1586.229) [-1580.862] (-1578.763) * [-1570.576] (-1601.117) (-1575.202) (-1576.973) -- 0:06:59
229000 -- (-1586.254) (-1575.681) [-1569.304] (-1582.016) * (-1585.276) (-1589.912) (-1575.219) [-1571.322] -- 0:07:00
230000 -- (-1568.115) (-1585.518) [-1571.083] (-1576.485) * (-1562.893) [-1571.355] (-1581.436) (-1577.781) -- 0:06:58
Average standard deviation of split frequencies: 0.012881
231000 -- (-1604.279) (-1572.698) [-1574.320] (-1574.971) * (-1569.499) (-1576.074) (-1583.579) [-1565.986] -- 0:06:59
232000 -- (-1581.345) (-1594.766) (-1564.134) [-1572.258] * (-1574.296) (-1582.904) (-1575.070) [-1566.959] -- 0:07:00
233000 -- (-1580.357) (-1578.612) [-1565.992] (-1577.939) * (-1575.663) (-1613.022) (-1572.824) [-1570.094] -- 0:06:58
234000 -- (-1575.528) [-1566.224] (-1580.944) (-1581.597) * [-1566.909] (-1584.541) (-1583.139) (-1568.373) -- 0:06:59
235000 -- (-1576.753) (-1580.725) (-1599.906) [-1581.821] * (-1576.085) (-1573.885) (-1585.799) [-1564.956] -- 0:06:56
Average standard deviation of split frequencies: 0.012741
236000 -- (-1581.017) (-1572.028) [-1571.457] (-1587.480) * [-1576.422] (-1578.734) (-1583.134) (-1572.310) -- 0:06:57
237000 -- (-1600.867) [-1585.221] (-1579.323) (-1573.216) * (-1575.788) (-1581.114) (-1571.224) [-1565.859] -- 0:06:55
238000 -- (-1573.058) (-1586.598) (-1572.801) [-1566.218] * (-1590.328) (-1566.692) [-1579.982] (-1583.896) -- 0:06:56
239000 -- (-1578.326) (-1598.055) (-1580.162) [-1563.493] * (-1576.671) (-1588.887) (-1579.425) [-1574.119] -- 0:06:53
240000 -- [-1584.841] (-1586.882) (-1588.091) (-1576.969) * (-1579.283) (-1597.220) (-1565.614) [-1574.664] -- 0:06:54
Average standard deviation of split frequencies: 0.013007
241000 -- (-1589.639) [-1570.157] (-1570.484) (-1574.117) * [-1566.566] (-1573.016) (-1591.480) (-1589.571) -- 0:06:55
242000 -- (-1568.652) [-1567.694] (-1578.232) (-1590.832) * (-1570.532) (-1576.480) [-1583.457] (-1600.350) -- 0:06:53
243000 -- [-1568.427] (-1584.166) (-1574.896) (-1568.793) * (-1573.762) (-1586.574) [-1574.558] (-1585.315) -- 0:06:54
244000 -- [-1575.176] (-1571.542) (-1569.963) (-1585.718) * (-1566.289) (-1576.404) (-1578.743) [-1567.425] -- 0:06:52
245000 -- (-1574.084) [-1574.525] (-1585.840) (-1575.081) * (-1585.842) (-1572.409) (-1593.700) [-1572.694] -- 0:06:52
Average standard deviation of split frequencies: 0.013242
246000 -- (-1582.401) (-1573.800) (-1595.998) [-1565.141] * (-1571.907) (-1555.657) [-1560.979] (-1575.508) -- 0:06:50
247000 -- (-1585.562) [-1574.402] (-1590.439) (-1572.940) * (-1570.230) [-1569.900] (-1567.913) (-1598.683) -- 0:06:51
248000 -- (-1593.265) (-1569.937) [-1565.590] (-1585.637) * (-1578.334) [-1571.597] (-1590.708) (-1583.034) -- 0:06:49
249000 -- (-1582.033) (-1571.151) (-1569.052) [-1569.575] * (-1567.964) (-1561.946) (-1581.266) [-1562.091] -- 0:06:50
250000 -- (-1573.485) (-1579.953) (-1580.263) [-1579.732] * (-1584.422) [-1559.445] (-1571.920) (-1585.118) -- 0:06:48
Average standard deviation of split frequencies: 0.012936
251000 -- (-1577.202) (-1570.665) [-1569.015] (-1571.570) * [-1577.315] (-1593.454) (-1575.629) (-1568.536) -- 0:06:48
252000 -- (-1582.209) (-1581.536) [-1569.723] (-1567.139) * [-1562.143] (-1582.979) (-1583.259) (-1581.303) -- 0:06:46
253000 -- (-1580.791) (-1598.230) (-1567.962) [-1565.484] * [-1566.266] (-1578.810) (-1586.477) (-1585.452) -- 0:06:47
254000 -- (-1576.864) [-1568.793] (-1575.744) (-1576.674) * (-1570.624) [-1577.170] (-1573.710) (-1579.120) -- 0:06:48
255000 -- (-1593.285) (-1581.636) (-1563.754) [-1577.184] * (-1574.204) [-1571.325] (-1600.878) (-1578.481) -- 0:06:46
Average standard deviation of split frequencies: 0.013230
256000 -- (-1579.572) (-1588.110) [-1577.349] (-1594.289) * (-1588.291) (-1576.351) (-1586.345) [-1587.027] -- 0:06:46
257000 -- [-1572.668] (-1591.607) (-1589.340) (-1576.082) * [-1579.441] (-1579.639) (-1571.624) (-1571.320) -- 0:06:44
258000 -- [-1566.275] (-1579.765) (-1592.473) (-1569.975) * (-1584.113) (-1570.648) [-1566.515] (-1575.549) -- 0:06:45
259000 -- (-1582.757) [-1572.012] (-1578.769) (-1588.455) * (-1573.592) [-1564.256] (-1566.107) (-1592.243) -- 0:06:43
260000 -- (-1568.564) (-1583.333) [-1564.158] (-1564.799) * (-1571.248) (-1567.899) (-1582.351) [-1570.408] -- 0:06:44
Average standard deviation of split frequencies: 0.013492
261000 -- (-1578.605) (-1597.366) (-1590.264) [-1572.597] * (-1596.239) [-1574.817] (-1572.251) (-1590.684) -- 0:06:42
262000 -- (-1586.002) (-1578.190) (-1576.241) [-1561.980] * (-1579.364) [-1565.897] (-1573.149) (-1578.128) -- 0:06:42
263000 -- (-1575.059) (-1586.020) [-1579.014] (-1586.581) * (-1573.537) (-1584.760) (-1584.118) [-1561.912] -- 0:06:40
264000 -- [-1579.108] (-1582.540) (-1588.090) (-1580.490) * (-1574.490) (-1584.135) [-1567.375] (-1564.806) -- 0:06:41
265000 -- (-1586.799) (-1579.778) (-1597.125) [-1571.210] * [-1561.507] (-1568.125) (-1576.165) (-1597.809) -- 0:06:39
Average standard deviation of split frequencies: 0.013541
266000 -- (-1579.306) (-1584.587) [-1577.089] (-1581.212) * [-1571.531] (-1573.995) (-1578.559) (-1579.170) -- 0:06:40
267000 -- (-1581.004) (-1574.091) [-1562.845] (-1590.385) * (-1571.963) [-1566.544] (-1603.768) (-1574.693) -- 0:06:40
268000 -- (-1572.686) (-1592.442) [-1570.426] (-1584.707) * [-1576.168] (-1585.679) (-1583.544) (-1568.741) -- 0:06:38
269000 -- (-1581.025) (-1591.243) [-1566.855] (-1598.103) * (-1566.423) [-1558.621] (-1569.137) (-1594.402) -- 0:06:39
270000 -- (-1574.916) (-1580.699) (-1576.613) [-1585.118] * [-1573.747] (-1567.590) (-1574.449) (-1603.435) -- 0:06:37
Average standard deviation of split frequencies: 0.012809
271000 -- (-1589.080) (-1590.849) [-1577.312] (-1590.908) * [-1583.436] (-1586.890) (-1576.237) (-1585.510) -- 0:06:38
272000 -- (-1579.566) (-1597.248) (-1612.277) [-1572.575] * (-1570.502) (-1602.426) (-1577.197) [-1572.021] -- 0:06:36
273000 -- (-1579.632) (-1575.225) [-1577.229] (-1582.473) * (-1573.175) (-1591.768) [-1574.411] (-1573.440) -- 0:06:36
274000 -- (-1581.222) (-1568.296) (-1590.670) [-1578.035] * [-1567.845] (-1582.351) (-1574.821) (-1569.567) -- 0:06:34
275000 -- (-1590.054) [-1561.512] (-1581.303) (-1575.202) * (-1565.640) (-1584.482) (-1592.304) [-1559.097] -- 0:06:35
Average standard deviation of split frequencies: 0.012781
276000 -- (-1595.200) [-1566.088] (-1571.260) (-1588.785) * (-1578.150) (-1583.804) [-1569.060] (-1571.003) -- 0:06:33
277000 -- (-1582.978) (-1595.379) [-1570.697] (-1589.091) * (-1564.341) (-1607.555) (-1587.219) [-1570.434] -- 0:06:34
278000 -- [-1564.356] (-1580.455) (-1574.722) (-1595.356) * [-1572.369] (-1571.101) (-1580.888) (-1583.891) -- 0:06:32
279000 -- (-1577.914) (-1581.207) (-1581.593) [-1571.631] * (-1574.941) [-1564.438] (-1588.486) (-1566.849) -- 0:06:32
280000 -- (-1584.935) [-1569.823] (-1577.902) (-1577.920) * (-1579.024) (-1570.357) (-1588.135) [-1561.935] -- 0:06:33
Average standard deviation of split frequencies: 0.012782
281000 -- (-1590.800) (-1571.332) [-1572.646] (-1601.030) * (-1588.612) [-1571.028] (-1586.063) (-1572.013) -- 0:06:31
282000 -- (-1572.355) [-1578.238] (-1581.349) (-1572.762) * (-1572.344) [-1575.224] (-1571.250) (-1587.166) -- 0:06:32
283000 -- (-1583.615) [-1570.870] (-1575.593) (-1585.735) * (-1575.104) (-1575.236) (-1582.589) [-1566.175] -- 0:06:30
284000 -- [-1578.528] (-1569.107) (-1568.734) (-1580.579) * [-1571.334] (-1592.502) (-1577.737) (-1571.878) -- 0:06:30
285000 -- (-1575.060) [-1571.034] (-1581.890) (-1579.618) * (-1587.967) (-1585.106) (-1576.860) [-1568.951] -- 0:06:28
Average standard deviation of split frequencies: 0.012628
286000 -- (-1590.406) (-1588.485) (-1572.192) [-1579.252] * (-1576.089) (-1572.614) (-1571.236) [-1576.740] -- 0:06:29
287000 -- (-1577.849) (-1577.770) (-1570.873) [-1564.418] * (-1589.025) (-1568.705) (-1586.848) [-1568.307] -- 0:06:27
288000 -- (-1574.003) (-1576.149) (-1601.300) [-1568.946] * (-1591.851) (-1574.862) (-1589.695) [-1570.867] -- 0:06:28
289000 -- [-1570.619] (-1578.722) (-1581.463) (-1573.564) * [-1574.450] (-1587.724) (-1567.789) (-1578.312) -- 0:06:26
290000 -- [-1568.384] (-1568.395) (-1577.759) (-1580.316) * (-1569.348) (-1590.365) [-1566.831] (-1589.970) -- 0:06:26
Average standard deviation of split frequencies: 0.012336
291000 -- (-1579.051) (-1597.555) [-1570.950] (-1577.240) * (-1570.457) [-1564.183] (-1580.060) (-1580.957) -- 0:06:24
292000 -- (-1571.975) (-1582.985) (-1578.101) [-1571.491] * (-1572.126) (-1579.681) [-1568.981] (-1579.626) -- 0:06:25
293000 -- [-1563.723] (-1570.140) (-1582.790) (-1574.934) * (-1583.081) (-1588.438) [-1564.233] (-1587.987) -- 0:06:26
294000 -- (-1560.539) (-1577.493) [-1566.535] (-1574.246) * (-1578.036) (-1579.315) [-1569.181] (-1597.270) -- 0:06:24
295000 -- (-1577.387) (-1581.648) (-1576.877) [-1576.715] * (-1579.213) (-1581.192) (-1574.221) [-1572.387] -- 0:06:24
Average standard deviation of split frequencies: 0.013218
296000 -- (-1578.538) (-1578.673) [-1567.085] (-1591.978) * (-1587.409) (-1593.628) (-1571.624) [-1577.704] -- 0:06:22
297000 -- (-1575.572) (-1593.671) [-1573.287] (-1580.102) * [-1568.745] (-1579.570) (-1585.964) (-1584.224) -- 0:06:23
298000 -- [-1566.448] (-1576.873) (-1564.212) (-1601.573) * (-1569.548) (-1589.945) (-1594.157) [-1568.295] -- 0:06:21
299000 -- [-1561.075] (-1573.930) (-1568.829) (-1596.705) * [-1572.485] (-1582.395) (-1563.375) (-1585.479) -- 0:06:22
300000 -- (-1588.761) [-1566.055] (-1579.988) (-1570.723) * [-1568.094] (-1572.834) (-1573.720) (-1585.274) -- 0:06:20
Average standard deviation of split frequencies: 0.012286
301000 -- (-1582.305) (-1578.803) [-1584.213] (-1578.853) * (-1566.115) [-1561.721] (-1572.285) (-1574.323) -- 0:06:20
302000 -- (-1574.966) (-1566.383) [-1570.955] (-1587.743) * (-1588.658) (-1570.982) [-1581.178] (-1579.513) -- 0:06:21
303000 -- (-1575.764) (-1572.790) (-1574.617) [-1572.762] * (-1578.625) (-1574.306) (-1587.459) [-1567.622] -- 0:06:19
304000 -- (-1580.009) (-1585.468) [-1571.412] (-1586.586) * (-1582.886) (-1575.308) (-1578.531) [-1574.555] -- 0:06:20
305000 -- (-1601.995) (-1572.320) [-1570.828] (-1578.694) * (-1587.352) (-1571.411) [-1569.476] (-1578.209) -- 0:06:18
Average standard deviation of split frequencies: 0.011507
306000 -- (-1591.739) (-1580.505) [-1570.685] (-1583.534) * (-1563.014) (-1579.797) [-1559.783] (-1602.026) -- 0:06:18
307000 -- (-1580.285) (-1579.775) [-1567.725] (-1576.530) * [-1570.791] (-1606.050) (-1577.036) (-1582.919) -- 0:06:16
308000 -- [-1573.421] (-1603.255) (-1572.325) (-1573.680) * (-1580.967) (-1589.839) [-1576.355] (-1585.351) -- 0:06:17
309000 -- [-1574.371] (-1568.449) (-1585.163) (-1603.735) * (-1574.885) [-1567.107] (-1583.442) (-1575.205) -- 0:06:15
310000 -- (-1588.708) (-1568.424) [-1572.545] (-1593.575) * [-1577.826] (-1582.035) (-1575.034) (-1595.037) -- 0:06:16
Average standard deviation of split frequencies: 0.012091
311000 -- (-1579.238) (-1577.121) [-1574.281] (-1590.977) * (-1603.839) (-1577.819) (-1585.934) [-1572.437] -- 0:06:14
312000 -- (-1589.629) [-1570.346] (-1580.702) (-1584.400) * (-1594.921) [-1572.942] (-1563.909) (-1571.173) -- 0:06:14
313000 -- (-1567.600) (-1580.757) (-1572.550) [-1563.308] * (-1585.438) (-1568.567) (-1571.013) [-1572.028] -- 0:06:13
314000 -- [-1573.766] (-1586.202) (-1584.510) (-1567.159) * (-1599.404) [-1563.397] (-1568.209) (-1588.460) -- 0:06:13
315000 -- (-1575.106) (-1582.681) (-1586.180) [-1578.698] * (-1580.890) [-1568.425] (-1571.662) (-1584.095) -- 0:06:11
Average standard deviation of split frequencies: 0.011771
316000 -- (-1579.492) (-1578.202) (-1580.234) [-1571.080] * (-1603.724) (-1570.945) (-1567.302) [-1574.623] -- 0:06:12
317000 -- [-1573.301] (-1573.796) (-1585.158) (-1591.198) * (-1584.815) (-1586.842) (-1573.906) [-1572.062] -- 0:06:12
318000 -- [-1574.179] (-1577.516) (-1591.899) (-1583.262) * (-1570.117) (-1582.410) [-1563.795] (-1574.343) -- 0:06:11
319000 -- (-1579.538) [-1564.328] (-1572.884) (-1594.879) * (-1577.685) (-1567.827) (-1588.833) [-1580.278] -- 0:06:11
320000 -- [-1578.787] (-1579.534) (-1583.175) (-1572.844) * (-1578.008) (-1576.038) (-1578.749) [-1579.966] -- 0:06:09
Average standard deviation of split frequencies: 0.011411
321000 -- [-1570.833] (-1585.061) (-1584.263) (-1565.742) * (-1569.775) (-1573.320) (-1595.265) [-1570.251] -- 0:06:10
322000 -- (-1570.094) (-1576.993) [-1575.517] (-1579.895) * (-1565.107) (-1579.093) (-1584.656) [-1567.755] -- 0:06:08
323000 -- (-1585.006) [-1567.990] (-1581.313) (-1582.866) * (-1578.886) [-1574.688] (-1574.469) (-1580.621) -- 0:06:08
324000 -- [-1563.640] (-1589.257) (-1582.697) (-1579.234) * [-1567.815] (-1582.594) (-1577.690) (-1569.527) -- 0:06:07
325000 -- (-1571.640) (-1569.545) [-1582.061] (-1568.956) * [-1574.382] (-1592.706) (-1567.229) (-1576.267) -- 0:06:07
Average standard deviation of split frequencies: 0.011034
326000 -- (-1574.995) (-1583.907) (-1572.615) [-1563.735] * [-1570.008] (-1580.293) (-1585.656) (-1565.511) -- 0:06:05
327000 -- [-1573.074] (-1589.149) (-1577.828) (-1570.896) * (-1575.646) (-1572.869) [-1568.584] (-1566.301) -- 0:06:06
328000 -- (-1574.455) (-1593.597) (-1603.540) [-1569.264] * (-1570.275) (-1577.238) (-1569.552) [-1569.245] -- 0:06:04
329000 -- [-1563.007] (-1592.383) (-1577.939) (-1580.785) * (-1584.911) (-1598.514) [-1578.584] (-1564.941) -- 0:06:05
330000 -- [-1578.281] (-1577.801) (-1579.381) (-1567.467) * (-1585.104) [-1570.484] (-1581.638) (-1569.413) -- 0:06:03
Average standard deviation of split frequencies: 0.011016
331000 -- (-1570.869) (-1577.910) (-1587.641) [-1562.652] * [-1565.856] (-1564.485) (-1593.891) (-1577.235) -- 0:06:03
332000 -- (-1585.119) (-1587.437) (-1570.689) [-1571.516] * [-1572.707] (-1575.020) (-1570.398) (-1583.269) -- 0:06:04
333000 -- [-1570.308] (-1571.267) (-1573.722) (-1581.540) * (-1585.847) (-1583.847) [-1560.427] (-1573.085) -- 0:06:02
334000 -- [-1582.220] (-1584.102) (-1573.793) (-1576.343) * (-1607.357) (-1576.684) [-1562.146] (-1580.138) -- 0:06:02
335000 -- (-1592.145) (-1575.987) (-1577.972) [-1571.103] * (-1573.382) (-1578.731) [-1559.523] (-1591.965) -- 0:06:01
Average standard deviation of split frequencies: 0.010884
336000 -- (-1595.472) [-1575.679] (-1588.490) (-1576.360) * (-1591.640) (-1574.566) [-1570.657] (-1580.626) -- 0:06:01
337000 -- (-1620.402) [-1566.712] (-1580.612) (-1579.030) * (-1594.978) (-1571.191) [-1568.655] (-1583.330) -- 0:06:00
338000 -- (-1577.507) [-1561.429] (-1576.231) (-1569.031) * (-1567.987) (-1582.402) [-1579.437] (-1575.160) -- 0:06:00
339000 -- (-1581.905) (-1564.584) (-1575.567) [-1567.359] * (-1572.774) (-1581.411) (-1588.332) [-1571.564] -- 0:05:58
340000 -- (-1593.205) (-1571.310) (-1585.058) [-1571.734] * (-1569.541) (-1585.688) (-1590.646) [-1571.764] -- 0:05:59
Average standard deviation of split frequencies: 0.010741
341000 -- [-1575.231] (-1572.500) (-1577.484) (-1582.395) * (-1583.312) (-1594.698) (-1570.649) [-1563.247] -- 0:05:57
342000 -- (-1579.882) [-1564.742] (-1567.502) (-1580.410) * (-1573.785) (-1597.668) (-1578.274) [-1568.640] -- 0:05:57
343000 -- [-1568.983] (-1580.726) (-1571.051) (-1585.289) * (-1573.720) (-1584.786) [-1569.308] (-1587.163) -- 0:05:56
344000 -- [-1565.696] (-1579.381) (-1613.764) (-1580.605) * [-1567.304] (-1579.039) (-1580.268) (-1579.625) -- 0:05:56
345000 -- (-1569.537) (-1585.407) (-1574.640) [-1569.417] * (-1568.856) (-1564.365) (-1582.201) [-1579.982] -- 0:05:56
Average standard deviation of split frequencies: 0.011266
346000 -- (-1580.155) (-1566.458) (-1584.958) [-1577.220] * [-1569.825] (-1573.193) (-1567.703) (-1599.578) -- 0:05:55
347000 -- [-1569.993] (-1571.098) (-1570.333) (-1590.772) * (-1578.723) (-1574.513) [-1564.436] (-1601.228) -- 0:05:55
348000 -- (-1580.745) (-1574.236) [-1564.334] (-1577.736) * (-1599.432) (-1577.248) [-1567.003] (-1606.336) -- 0:05:54
349000 -- [-1571.253] (-1577.326) (-1577.055) (-1574.646) * (-1574.901) (-1576.448) [-1564.487] (-1593.906) -- 0:05:54
350000 -- (-1577.013) (-1566.465) [-1577.867] (-1590.294) * (-1582.558) [-1565.621] (-1568.360) (-1590.892) -- 0:05:52
Average standard deviation of split frequencies: 0.011334
351000 -- [-1561.337] (-1580.568) (-1582.999) (-1580.667) * (-1572.424) (-1576.720) [-1570.099] (-1577.621) -- 0:05:53
352000 -- (-1577.884) (-1586.342) [-1573.572] (-1574.152) * (-1576.719) (-1591.379) [-1571.960] (-1611.345) -- 0:05:51
353000 -- (-1583.589) [-1572.167] (-1582.030) (-1584.373) * [-1576.466] (-1586.149) (-1576.211) (-1589.826) -- 0:05:51
354000 -- (-1586.378) (-1572.680) [-1565.169] (-1572.764) * (-1584.413) [-1569.642] (-1567.465) (-1605.421) -- 0:05:52
355000 -- (-1586.816) (-1585.622) (-1581.330) [-1563.045] * (-1574.965) (-1577.077) [-1560.456] (-1594.760) -- 0:05:50
Average standard deviation of split frequencies: 0.011530
356000 -- (-1584.030) [-1582.415] (-1578.904) (-1567.387) * [-1572.493] (-1575.226) (-1583.672) (-1582.960) -- 0:05:50
357000 -- [-1574.301] (-1600.790) (-1583.857) (-1568.671) * [-1569.366] (-1579.432) (-1580.479) (-1576.431) -- 0:05:49
358000 -- (-1585.837) (-1588.117) [-1572.136] (-1570.292) * [-1567.837] (-1606.146) (-1598.400) (-1571.141) -- 0:05:49
359000 -- [-1573.371] (-1582.198) (-1581.896) (-1585.155) * (-1572.310) (-1594.056) (-1579.781) [-1576.930] -- 0:05:48
360000 -- [-1565.596] (-1566.488) (-1588.338) (-1606.427) * (-1598.917) (-1578.066) (-1583.523) [-1592.479] -- 0:05:48
Average standard deviation of split frequencies: 0.011452
361000 -- [-1577.365] (-1592.507) (-1581.048) (-1570.353) * (-1578.492) (-1579.144) (-1580.531) [-1569.024] -- 0:05:46
362000 -- (-1582.284) (-1589.327) (-1571.358) [-1577.096] * (-1578.055) (-1568.543) (-1586.273) [-1570.607] -- 0:05:47
363000 -- [-1568.502] (-1570.522) (-1575.734) (-1592.155) * (-1573.689) (-1574.333) (-1582.758) [-1579.020] -- 0:05:47
364000 -- [-1582.180] (-1582.829) (-1572.063) (-1586.556) * (-1589.233) (-1579.305) (-1581.505) [-1583.895] -- 0:05:45
365000 -- (-1591.893) (-1575.217) [-1576.519] (-1564.912) * (-1579.248) (-1601.363) (-1588.203) [-1580.196] -- 0:05:46
Average standard deviation of split frequencies: 0.012357
366000 -- (-1579.404) (-1598.215) (-1585.591) [-1574.983] * [-1577.796] (-1594.107) (-1590.788) (-1577.560) -- 0:05:44
367000 -- (-1577.261) (-1576.858) [-1563.484] (-1567.163) * (-1581.799) (-1580.983) (-1581.518) [-1583.114] -- 0:05:44
368000 -- (-1598.286) (-1571.097) (-1574.726) [-1562.661] * (-1587.460) (-1577.583) (-1578.977) [-1577.660] -- 0:05:43
369000 -- (-1594.083) (-1564.183) [-1575.315] (-1571.455) * [-1573.864] (-1592.892) (-1573.573) (-1573.284) -- 0:05:43
370000 -- (-1583.785) (-1572.738) [-1576.031] (-1575.792) * (-1593.041) [-1567.752] (-1563.677) (-1581.180) -- 0:05:42
Average standard deviation of split frequencies: 0.011971
371000 -- (-1582.432) (-1598.469) [-1564.854] (-1580.782) * (-1571.862) [-1572.356] (-1579.944) (-1583.922) -- 0:05:42
372000 -- [-1570.042] (-1581.802) (-1588.669) (-1604.853) * (-1588.315) (-1573.389) [-1577.883] (-1583.401) -- 0:05:41
373000 -- (-1585.979) (-1592.538) [-1563.528] (-1580.624) * (-1577.661) [-1573.582] (-1576.661) (-1572.387) -- 0:05:41
374000 -- [-1566.555] (-1598.912) (-1572.287) (-1566.071) * (-1579.823) [-1571.727] (-1573.690) (-1567.633) -- 0:05:41
375000 -- [-1577.511] (-1587.055) (-1598.001) (-1576.444) * (-1582.851) [-1576.597] (-1570.581) (-1571.560) -- 0:05:40
Average standard deviation of split frequencies: 0.011985
376000 -- [-1570.167] (-1592.043) (-1578.882) (-1582.474) * [-1572.957] (-1564.852) (-1580.041) (-1577.024) -- 0:05:40
377000 -- [-1576.249] (-1578.279) (-1573.915) (-1569.376) * [-1568.417] (-1573.989) (-1579.025) (-1573.967) -- 0:05:38
378000 -- [-1575.100] (-1586.291) (-1586.441) (-1588.744) * (-1575.021) [-1568.195] (-1585.038) (-1570.562) -- 0:05:38
379000 -- (-1577.319) (-1569.987) [-1575.202] (-1583.551) * [-1573.116] (-1578.682) (-1573.948) (-1574.124) -- 0:05:37
380000 -- (-1572.099) (-1571.136) (-1589.965) [-1573.857] * (-1570.786) (-1575.766) (-1588.527) [-1564.110] -- 0:05:37
Average standard deviation of split frequencies: 0.012216
381000 -- (-1563.326) [-1574.232] (-1567.453) (-1590.837) * (-1560.289) [-1569.216] (-1581.010) (-1588.714) -- 0:05:36
382000 -- [-1568.519] (-1577.735) (-1581.793) (-1582.817) * (-1577.335) [-1569.796] (-1572.642) (-1613.976) -- 0:05:36
383000 -- [-1569.904] (-1568.740) (-1586.253) (-1584.390) * (-1591.479) (-1571.034) [-1570.918] (-1586.091) -- 0:05:35
384000 -- (-1572.801) [-1561.531] (-1583.682) (-1582.365) * (-1589.062) (-1576.165) [-1568.215] (-1576.928) -- 0:05:35
385000 -- (-1568.604) [-1562.937] (-1586.949) (-1569.814) * (-1579.903) [-1567.306] (-1585.993) (-1569.451) -- 0:05:35
Average standard deviation of split frequencies: 0.011991
386000 -- [-1562.861] (-1565.601) (-1587.443) (-1573.671) * [-1583.052] (-1575.979) (-1583.818) (-1571.577) -- 0:05:34
387000 -- [-1572.589] (-1570.626) (-1592.477) (-1584.422) * (-1575.905) (-1577.736) (-1592.651) [-1568.565] -- 0:05:34
388000 -- (-1573.599) [-1579.398] (-1595.989) (-1572.330) * (-1580.831) (-1584.897) (-1576.237) [-1565.726] -- 0:05:32
389000 -- (-1589.841) (-1597.431) [-1567.721] (-1572.025) * (-1590.842) (-1587.552) (-1581.875) [-1567.760] -- 0:05:32
390000 -- (-1586.179) (-1594.051) (-1573.382) [-1571.607] * (-1574.003) (-1587.704) [-1577.113] (-1573.974) -- 0:05:31
Average standard deviation of split frequencies: 0.012067
391000 -- (-1573.656) (-1578.871) (-1568.026) [-1578.146] * (-1567.957) [-1571.490] (-1587.612) (-1571.886) -- 0:05:31
392000 -- (-1571.993) (-1606.063) (-1592.698) [-1572.041] * (-1578.412) [-1566.906] (-1571.923) (-1583.029) -- 0:05:30
393000 -- (-1588.209) (-1585.950) (-1580.915) [-1573.596] * (-1589.495) [-1566.904] (-1567.564) (-1594.448) -- 0:05:30
394000 -- (-1566.473) (-1594.523) (-1567.551) [-1565.748] * [-1572.582] (-1591.793) (-1564.965) (-1589.964) -- 0:05:29
395000 -- [-1575.256] (-1582.654) (-1579.511) (-1579.424) * (-1578.931) (-1602.277) [-1568.491] (-1576.912) -- 0:05:29
Average standard deviation of split frequencies: 0.011631
396000 -- (-1568.457) [-1579.808] (-1582.548) (-1575.992) * [-1567.628] (-1568.734) (-1600.863) (-1579.345) -- 0:05:29
397000 -- (-1595.215) (-1581.052) [-1572.741] (-1576.222) * (-1572.035) [-1565.174] (-1583.370) (-1583.623) -- 0:05:28
398000 -- (-1578.473) [-1579.556] (-1587.309) (-1566.825) * (-1579.022) (-1574.380) [-1565.599] (-1572.294) -- 0:05:28
399000 -- (-1579.311) [-1567.355] (-1564.472) (-1570.363) * (-1574.558) (-1593.907) [-1575.520] (-1584.247) -- 0:05:26
400000 -- [-1574.140] (-1562.779) (-1590.582) (-1580.998) * (-1576.942) (-1589.402) [-1572.557] (-1562.557) -- 0:05:27
Average standard deviation of split frequencies: 0.012120
401000 -- (-1577.142) [-1570.665] (-1574.840) (-1582.179) * [-1573.692] (-1579.835) (-1576.784) (-1569.439) -- 0:05:25
402000 -- (-1576.865) [-1571.796] (-1601.144) (-1576.110) * (-1591.142) (-1573.007) [-1568.066] (-1584.600) -- 0:05:25
403000 -- (-1578.201) [-1576.869] (-1606.399) (-1579.643) * (-1583.474) (-1568.060) [-1565.212] (-1580.491) -- 0:05:24
404000 -- (-1576.722) [-1569.874] (-1580.537) (-1580.988) * [-1575.588] (-1576.912) (-1593.047) (-1569.518) -- 0:05:24
405000 -- (-1568.677) [-1564.121] (-1580.715) (-1580.401) * [-1570.650] (-1596.708) (-1572.010) (-1566.977) -- 0:05:24
Average standard deviation of split frequencies: 0.011829
406000 -- (-1570.745) [-1561.370] (-1574.881) (-1582.038) * (-1581.310) (-1577.673) [-1568.596] (-1561.957) -- 0:05:23
407000 -- [-1563.028] (-1576.798) (-1570.065) (-1593.982) * [-1572.660] (-1570.711) (-1590.057) (-1575.421) -- 0:05:23
408000 -- [-1567.162] (-1583.296) (-1583.502) (-1576.868) * (-1590.080) (-1573.178) [-1571.008] (-1583.732) -- 0:05:22
409000 -- (-1572.077) (-1590.874) [-1569.577] (-1565.138) * (-1579.013) (-1588.333) [-1570.127] (-1573.523) -- 0:05:22
410000 -- (-1586.144) (-1591.802) (-1562.341) [-1572.460] * (-1573.278) [-1567.176] (-1583.204) (-1592.690) -- 0:05:20
Average standard deviation of split frequencies: 0.012164
411000 -- [-1565.842] (-1596.736) (-1579.065) (-1570.106) * (-1580.103) (-1572.015) [-1561.390] (-1569.348) -- 0:05:21
412000 -- (-1570.685) (-1596.646) (-1583.740) [-1567.994] * (-1576.540) (-1590.230) (-1577.965) [-1567.904] -- 0:05:19
413000 -- [-1569.508] (-1581.917) (-1591.960) (-1569.380) * (-1576.618) (-1587.518) [-1565.184] (-1571.462) -- 0:05:19
414000 -- (-1572.042) (-1596.870) (-1579.405) [-1563.838] * (-1600.709) [-1576.321] (-1585.376) (-1566.404) -- 0:05:19
415000 -- (-1580.512) (-1604.743) (-1572.010) [-1569.041] * (-1598.986) (-1590.565) [-1571.805] (-1577.102) -- 0:05:18
Average standard deviation of split frequencies: 0.011643
416000 -- (-1578.371) (-1592.736) (-1566.569) [-1561.207] * (-1578.089) (-1584.839) (-1586.901) [-1574.465] -- 0:05:18
417000 -- [-1573.982] (-1590.497) (-1572.219) (-1568.108) * (-1572.926) (-1584.623) (-1583.264) [-1566.347] -- 0:05:17
418000 -- [-1573.332] (-1575.952) (-1585.179) (-1569.950) * (-1582.719) (-1588.071) (-1600.081) [-1573.249] -- 0:05:17
419000 -- (-1581.780) (-1575.545) (-1577.566) [-1568.925] * (-1603.247) [-1574.720] (-1588.608) (-1578.842) -- 0:05:16
420000 -- (-1570.193) (-1576.075) [-1565.802] (-1587.741) * (-1576.286) [-1564.574] (-1576.879) (-1593.756) -- 0:05:16
Average standard deviation of split frequencies: 0.011831
421000 -- (-1577.581) [-1583.550] (-1585.230) (-1573.613) * [-1572.147] (-1579.865) (-1594.478) (-1594.817) -- 0:05:14
422000 -- (-1593.995) (-1579.779) (-1581.365) [-1576.216] * [-1565.490] (-1576.255) (-1579.313) (-1607.076) -- 0:05:15
423000 -- (-1577.686) (-1584.928) [-1569.919] (-1583.853) * [-1572.484] (-1592.009) (-1575.683) (-1594.216) -- 0:05:13
424000 -- (-1591.112) [-1572.893] (-1575.795) (-1580.242) * [-1577.797] (-1582.468) (-1594.157) (-1580.514) -- 0:05:13
425000 -- (-1571.987) [-1571.855] (-1582.366) (-1587.103) * (-1569.548) (-1600.341) (-1578.462) [-1577.061] -- 0:05:13
Average standard deviation of split frequencies: 0.012260
426000 -- (-1585.489) (-1583.010) [-1577.168] (-1576.000) * (-1560.565) (-1595.438) (-1561.204) [-1565.008] -- 0:05:12
427000 -- (-1578.990) [-1576.089] (-1574.803) (-1573.899) * [-1572.420] (-1573.499) (-1558.931) (-1584.186) -- 0:05:12
428000 -- (-1582.264) (-1582.854) [-1570.664] (-1575.922) * (-1574.184) [-1562.346] (-1588.525) (-1580.601) -- 0:05:11
429000 -- (-1570.431) [-1582.649] (-1579.405) (-1578.517) * [-1571.077] (-1572.542) (-1581.213) (-1588.948) -- 0:05:11
430000 -- (-1591.740) (-1589.426) (-1562.987) [-1566.444] * (-1579.193) (-1570.038) (-1591.949) [-1573.540] -- 0:05:10
Average standard deviation of split frequencies: 0.012058
431000 -- (-1580.208) (-1568.846) [-1566.519] (-1582.583) * [-1574.775] (-1574.018) (-1595.387) (-1581.971) -- 0:05:10
432000 -- [-1574.421] (-1578.354) (-1573.562) (-1595.358) * (-1580.279) (-1578.176) [-1566.640] (-1585.014) -- 0:05:08
433000 -- (-1573.429) (-1570.132) [-1575.746] (-1588.317) * (-1572.859) [-1567.820] (-1591.947) (-1584.988) -- 0:05:09
434000 -- (-1604.705) (-1581.899) (-1578.703) [-1568.584] * (-1578.587) [-1582.308] (-1578.648) (-1580.880) -- 0:05:07
435000 -- (-1588.247) [-1575.273] (-1580.641) (-1570.902) * (-1587.520) (-1565.612) [-1564.666] (-1571.817) -- 0:05:07
Average standard deviation of split frequencies: 0.012033
436000 -- (-1587.372) [-1569.176] (-1570.626) (-1571.648) * (-1575.158) [-1572.842] (-1570.597) (-1582.505) -- 0:05:06
437000 -- (-1575.030) (-1577.019) [-1562.705] (-1565.029) * (-1577.155) (-1599.590) (-1568.557) [-1568.540] -- 0:05:06
438000 -- (-1592.090) (-1580.492) [-1575.368] (-1569.084) * (-1574.174) (-1581.961) (-1570.560) [-1571.221] -- 0:05:06
439000 -- (-1579.343) (-1567.948) [-1578.630] (-1586.240) * [-1563.277] (-1606.893) (-1571.619) (-1568.527) -- 0:05:05
440000 -- (-1587.761) [-1579.364] (-1590.655) (-1585.931) * (-1572.543) (-1587.500) (-1573.365) [-1571.740] -- 0:05:05
Average standard deviation of split frequencies: 0.011627
441000 -- (-1578.578) (-1568.924) [-1576.523] (-1576.502) * (-1587.495) (-1586.967) (-1573.510) [-1572.804] -- 0:05:04
442000 -- (-1570.947) (-1591.669) (-1571.163) [-1579.681] * (-1581.184) (-1602.066) (-1578.652) [-1567.687] -- 0:05:04
443000 -- (-1575.962) [-1569.629] (-1576.246) (-1586.144) * (-1584.803) (-1574.075) (-1573.693) [-1561.680] -- 0:05:03
444000 -- (-1591.687) (-1579.455) (-1566.678) [-1567.082] * (-1583.585) (-1580.863) (-1576.114) [-1566.015] -- 0:05:03
445000 -- [-1566.738] (-1583.121) (-1589.842) (-1574.235) * [-1571.974] (-1572.590) (-1582.031) (-1579.685) -- 0:05:01
Average standard deviation of split frequencies: 0.011224
446000 -- (-1575.893) (-1573.731) [-1577.809] (-1586.491) * (-1577.827) [-1558.862] (-1591.669) (-1581.330) -- 0:05:01
447000 -- (-1569.330) (-1587.370) [-1570.678] (-1571.930) * (-1583.354) (-1577.972) (-1587.833) [-1571.729] -- 0:05:00
448000 -- (-1587.725) [-1572.038] (-1572.913) (-1577.962) * (-1582.247) [-1567.700] (-1582.385) (-1574.158) -- 0:05:00
449000 -- (-1590.070) [-1561.589] (-1588.080) (-1571.222) * (-1581.714) [-1584.220] (-1584.925) (-1569.502) -- 0:05:00
450000 -- (-1580.677) (-1570.327) (-1586.561) [-1569.747] * (-1589.636) (-1575.525) [-1573.799] (-1587.442) -- 0:04:59
Average standard deviation of split frequencies: 0.011074
451000 -- [-1578.419] (-1570.826) (-1580.619) (-1577.449) * (-1567.871) (-1590.477) [-1562.503] (-1590.591) -- 0:04:59
452000 -- (-1578.906) (-1567.200) (-1589.503) [-1570.699] * (-1580.038) [-1571.183] (-1570.614) (-1581.447) -- 0:04:58
453000 -- (-1579.225) [-1568.464] (-1584.523) (-1575.139) * (-1581.022) [-1567.138] (-1570.378) (-1567.559) -- 0:04:58
454000 -- (-1579.364) (-1572.431) (-1579.860) [-1572.088] * (-1577.598) (-1579.291) [-1574.249] (-1595.568) -- 0:04:57
455000 -- (-1572.049) [-1583.489] (-1592.255) (-1589.426) * (-1593.565) (-1583.610) [-1570.888] (-1590.942) -- 0:04:57
Average standard deviation of split frequencies: 0.011240
456000 -- (-1583.501) [-1573.354] (-1584.768) (-1574.979) * (-1584.397) (-1571.996) (-1571.777) [-1580.050] -- 0:04:55
457000 -- (-1575.426) (-1571.559) [-1569.739] (-1580.134) * (-1583.368) (-1574.011) [-1578.229] (-1576.332) -- 0:04:55
458000 -- (-1580.946) (-1570.430) [-1572.766] (-1591.314) * (-1598.172) (-1574.203) (-1575.392) [-1572.538] -- 0:04:54
459000 -- (-1596.684) [-1581.279] (-1578.831) (-1583.764) * (-1580.564) (-1586.299) [-1569.481] (-1599.725) -- 0:04:54
460000 -- [-1581.831] (-1572.628) (-1587.395) (-1582.192) * [-1560.444] (-1571.844) (-1570.735) (-1572.542) -- 0:04:53
Average standard deviation of split frequencies: 0.011484
461000 -- (-1584.152) (-1584.282) (-1577.388) [-1575.616] * (-1594.251) (-1576.591) [-1573.627] (-1580.740) -- 0:04:53
462000 -- (-1575.737) [-1566.122] (-1574.862) (-1590.554) * (-1600.195) (-1594.061) [-1575.128] (-1585.545) -- 0:04:53
463000 -- (-1601.073) [-1563.778] (-1574.122) (-1576.316) * [-1571.629] (-1595.539) (-1584.444) (-1576.102) -- 0:04:52
464000 -- (-1597.314) [-1570.312] (-1573.274) (-1562.059) * (-1591.190) (-1588.744) (-1573.527) [-1570.459] -- 0:04:52
465000 -- (-1592.895) [-1568.954] (-1580.352) (-1571.272) * (-1590.863) (-1559.947) [-1565.556] (-1586.503) -- 0:04:51
Average standard deviation of split frequencies: 0.011377
466000 -- (-1590.754) [-1571.810] (-1572.989) (-1567.841) * (-1572.742) [-1566.054] (-1574.593) (-1572.396) -- 0:04:51
467000 -- (-1579.807) [-1567.792] (-1575.817) (-1582.309) * (-1593.623) [-1565.976] (-1576.819) (-1567.484) -- 0:04:49
468000 -- (-1592.083) [-1571.137] (-1585.783) (-1568.409) * (-1564.046) (-1577.991) (-1583.670) [-1566.743] -- 0:04:49
469000 -- (-1606.694) (-1577.512) (-1571.386) [-1567.844] * (-1569.586) (-1570.039) [-1565.881] (-1579.960) -- 0:04:48
470000 -- (-1578.968) (-1585.856) [-1568.350] (-1590.593) * (-1572.402) (-1596.275) (-1572.134) [-1578.384] -- 0:04:48
Average standard deviation of split frequencies: 0.011169
471000 -- [-1569.409] (-1606.791) (-1563.578) (-1575.172) * [-1560.498] (-1575.201) (-1577.431) (-1579.685) -- 0:04:47
472000 -- (-1572.609) [-1575.143] (-1591.762) (-1568.843) * (-1587.741) (-1584.969) [-1580.209] (-1572.999) -- 0:04:47
473000 -- (-1572.752) (-1572.309) (-1583.375) [-1578.712] * (-1578.046) (-1580.476) (-1576.255) [-1576.334] -- 0:04:47
474000 -- (-1592.583) (-1577.736) (-1579.277) [-1570.283] * (-1577.781) (-1582.081) (-1588.190) [-1571.522] -- 0:04:46
475000 -- (-1582.415) [-1564.969] (-1577.784) (-1587.784) * (-1574.816) (-1569.881) (-1579.204) [-1564.741] -- 0:04:46
Average standard deviation of split frequencies: 0.010696
476000 -- (-1575.900) [-1569.925] (-1575.941) (-1585.532) * [-1574.906] (-1588.237) (-1568.482) (-1589.273) -- 0:04:45
477000 -- (-1589.328) (-1569.713) (-1571.610) [-1562.384] * (-1581.173) (-1602.699) (-1569.044) [-1572.107] -- 0:04:45
478000 -- (-1576.144) (-1575.302) (-1595.761) [-1570.193] * (-1582.028) (-1598.030) (-1585.260) [-1555.296] -- 0:04:43
479000 -- (-1579.480) [-1573.732] (-1591.735) (-1572.748) * [-1579.096] (-1582.091) (-1573.357) (-1587.205) -- 0:04:43
480000 -- (-1576.870) (-1581.016) (-1579.759) [-1569.796] * (-1586.766) (-1582.498) (-1576.985) [-1562.509] -- 0:04:42
Average standard deviation of split frequencies: 0.010461
481000 -- (-1573.618) (-1588.991) (-1573.264) [-1567.771] * (-1581.510) (-1585.697) (-1574.668) [-1569.989] -- 0:04:42
482000 -- (-1585.124) [-1572.846] (-1578.849) (-1572.855) * (-1582.756) [-1589.811] (-1577.160) (-1576.472) -- 0:04:41
483000 -- (-1574.042) (-1587.711) (-1598.620) [-1570.352] * (-1564.556) (-1586.178) (-1585.871) [-1572.438] -- 0:04:41
484000 -- (-1577.350) [-1579.757] (-1605.454) (-1569.280) * [-1564.332] (-1577.233) (-1580.501) (-1559.603) -- 0:04:40
485000 -- (-1588.257) (-1575.407) [-1572.054] (-1591.145) * (-1585.273) [-1581.713] (-1574.101) (-1563.050) -- 0:04:40
Average standard deviation of split frequencies: 0.010109
486000 -- (-1595.253) [-1577.985] (-1567.723) (-1577.660) * (-1593.995) (-1578.505) [-1566.403] (-1575.734) -- 0:04:39
487000 -- (-1574.271) (-1577.310) [-1576.933] (-1583.973) * (-1574.025) [-1569.427] (-1579.733) (-1566.303) -- 0:04:39
488000 -- (-1575.795) (-1585.753) (-1577.241) [-1571.851] * (-1588.582) (-1592.181) (-1582.189) [-1574.010] -- 0:04:39
489000 -- (-1576.964) (-1571.940) (-1593.100) [-1581.278] * (-1589.089) (-1590.286) [-1578.029] (-1567.574) -- 0:04:37
490000 -- (-1578.033) (-1577.696) [-1567.443] (-1572.210) * (-1585.083) [-1576.363] (-1579.799) (-1578.617) -- 0:04:37
Average standard deviation of split frequencies: 0.010324
491000 -- [-1567.658] (-1587.145) (-1568.790) (-1575.867) * (-1572.206) (-1584.516) [-1579.615] (-1577.804) -- 0:04:36
492000 -- (-1580.137) [-1572.830] (-1570.218) (-1577.305) * (-1570.900) (-1582.424) [-1568.880] (-1570.319) -- 0:04:36
493000 -- (-1563.837) (-1604.409) (-1578.493) [-1566.492] * (-1580.188) (-1575.647) (-1582.956) [-1562.753] -- 0:04:35
494000 -- [-1562.855] (-1589.896) (-1601.270) (-1574.309) * (-1593.351) (-1590.783) (-1571.859) [-1575.909] -- 0:04:35
495000 -- (-1579.513) (-1590.496) (-1577.938) [-1573.797] * (-1583.733) (-1592.840) (-1582.282) [-1564.974] -- 0:04:34
Average standard deviation of split frequencies: 0.009950
496000 -- [-1569.756] (-1576.292) (-1582.168) (-1589.282) * (-1570.018) (-1583.875) (-1580.534) [-1569.719] -- 0:04:34
497000 -- (-1583.054) (-1589.734) [-1568.491] (-1582.718) * [-1573.122] (-1582.838) (-1590.414) (-1576.056) -- 0:04:33
498000 -- [-1562.195] (-1589.543) (-1579.175) (-1605.311) * (-1587.003) (-1584.639) (-1583.657) [-1565.148] -- 0:04:33
499000 -- (-1572.103) [-1581.709] (-1593.821) (-1582.558) * [-1577.805] (-1597.681) (-1577.887) (-1571.568) -- 0:04:33
500000 -- (-1580.500) (-1601.102) [-1573.220] (-1578.938) * (-1576.765) (-1593.916) (-1574.074) [-1569.612] -- 0:04:32
Average standard deviation of split frequencies: 0.009842
501000 -- [-1568.089] (-1577.296) (-1575.519) (-1591.099) * [-1572.787] (-1572.683) (-1581.655) (-1597.314) -- 0:04:31
502000 -- (-1584.492) (-1589.391) (-1581.837) [-1571.640] * (-1568.319) (-1597.030) [-1568.458] (-1575.451) -- 0:04:30
503000 -- (-1576.947) (-1578.655) [-1569.723] (-1583.306) * (-1577.051) (-1575.909) [-1569.577] (-1572.644) -- 0:04:30
504000 -- (-1569.208) [-1573.862] (-1575.590) (-1596.065) * [-1565.519] (-1581.946) (-1572.642) (-1604.353) -- 0:04:29
505000 -- (-1575.333) [-1570.215] (-1574.098) (-1581.296) * (-1574.758) [-1569.912] (-1586.094) (-1576.923) -- 0:04:29
Average standard deviation of split frequencies: 0.009804
506000 -- (-1591.956) [-1572.949] (-1580.305) (-1571.486) * (-1576.384) (-1570.622) (-1585.853) [-1565.324] -- 0:04:28
507000 -- (-1579.489) [-1571.395] (-1584.200) (-1567.033) * [-1569.910] (-1583.809) (-1576.725) (-1585.555) -- 0:04:28
508000 -- (-1572.679) (-1573.903) (-1561.772) [-1561.198] * (-1571.678) (-1576.487) [-1567.196] (-1568.272) -- 0:04:27
509000 -- [-1575.363] (-1571.321) (-1570.621) (-1569.112) * (-1579.545) (-1577.583) (-1571.117) [-1572.624] -- 0:04:27
510000 -- (-1575.846) [-1570.994] (-1568.941) (-1578.751) * (-1585.529) (-1575.685) (-1582.351) [-1563.584] -- 0:04:27
Average standard deviation of split frequencies: 0.009072
511000 -- (-1581.847) (-1579.200) (-1586.695) [-1577.948] * [-1573.234] (-1580.429) (-1578.228) (-1586.630) -- 0:04:26
512000 -- (-1571.590) [-1573.301] (-1591.820) (-1573.722) * [-1566.613] (-1572.736) (-1589.720) (-1569.557) -- 0:04:25
513000 -- (-1582.418) (-1587.360) (-1594.135) [-1575.446] * (-1581.415) [-1570.695] (-1569.573) (-1587.615) -- 0:04:24
514000 -- [-1575.419] (-1574.836) (-1588.601) (-1586.554) * [-1567.511] (-1575.901) (-1572.020) (-1571.135) -- 0:04:24
515000 -- [-1581.518] (-1564.639) (-1606.732) (-1578.598) * [-1572.927] (-1580.260) (-1566.288) (-1587.237) -- 0:04:23
Average standard deviation of split frequencies: 0.009236
516000 -- (-1595.714) [-1556.952] (-1572.121) (-1574.873) * [-1572.886] (-1582.408) (-1564.307) (-1573.867) -- 0:04:23
517000 -- (-1570.046) [-1569.708] (-1589.445) (-1577.969) * (-1573.232) (-1580.242) (-1560.372) [-1571.963] -- 0:04:22
518000 -- (-1571.072) (-1573.427) (-1581.873) [-1573.354] * (-1568.588) [-1573.626] (-1588.802) (-1596.529) -- 0:04:22
519000 -- (-1568.609) [-1564.761] (-1576.060) (-1582.238) * [-1565.376] (-1569.268) (-1570.438) (-1600.735) -- 0:04:22
520000 -- (-1579.628) [-1576.828] (-1583.611) (-1583.340) * (-1581.793) (-1563.147) (-1569.995) [-1578.961] -- 0:04:21
Average standard deviation of split frequencies: 0.009183
521000 -- (-1587.482) (-1569.975) [-1571.364] (-1575.422) * [-1576.298] (-1576.413) (-1586.882) (-1583.756) -- 0:04:21
522000 -- (-1589.862) (-1577.358) (-1588.471) [-1572.013] * (-1581.887) (-1593.225) [-1578.656] (-1580.384) -- 0:04:20
523000 -- (-1592.018) [-1567.578] (-1570.364) (-1570.139) * (-1567.870) [-1575.962] (-1585.584) (-1582.816) -- 0:04:19
524000 -- (-1586.887) [-1572.547] (-1588.478) (-1569.111) * (-1601.156) [-1564.064] (-1581.038) (-1568.098) -- 0:04:18
525000 -- (-1594.229) (-1578.286) (-1573.133) [-1570.432] * (-1599.535) [-1572.013] (-1592.374) (-1572.176) -- 0:04:18
Average standard deviation of split frequencies: 0.009214
526000 -- (-1586.243) (-1582.950) (-1576.684) [-1573.097] * (-1600.371) (-1573.674) (-1566.974) [-1564.250] -- 0:04:17
527000 -- [-1578.091] (-1585.910) (-1573.732) (-1582.781) * (-1586.716) (-1577.100) (-1575.913) [-1564.811] -- 0:04:17
528000 -- (-1575.861) (-1595.155) (-1566.544) [-1579.085] * (-1580.486) (-1595.138) (-1575.653) [-1571.935] -- 0:04:16
529000 -- (-1575.783) (-1599.383) [-1569.386] (-1577.128) * (-1580.443) (-1589.056) (-1578.051) [-1563.434] -- 0:04:16
530000 -- [-1567.724] (-1580.075) (-1567.040) (-1572.929) * (-1566.788) (-1581.944) (-1583.324) [-1570.152] -- 0:04:16
Average standard deviation of split frequencies: 0.009299
531000 -- (-1605.227) (-1583.031) [-1568.705] (-1579.623) * (-1575.294) (-1580.230) (-1573.553) [-1565.544] -- 0:04:15
532000 -- (-1575.602) (-1580.098) (-1566.740) [-1569.497] * [-1571.285] (-1579.036) (-1566.143) (-1592.979) -- 0:04:15
533000 -- (-1573.553) [-1577.896] (-1585.297) (-1575.313) * (-1569.249) [-1574.059] (-1584.727) (-1568.535) -- 0:04:14
534000 -- [-1571.588] (-1569.399) (-1574.447) (-1579.101) * (-1577.582) (-1574.967) [-1571.327] (-1584.676) -- 0:04:13
535000 -- (-1572.921) (-1572.746) [-1568.007] (-1572.235) * (-1588.825) (-1578.056) [-1582.294] (-1578.572) -- 0:04:12
Average standard deviation of split frequencies: 0.009400
536000 -- (-1572.752) [-1568.585] (-1598.630) (-1582.298) * (-1559.703) (-1582.326) [-1572.129] (-1564.268) -- 0:04:12
537000 -- (-1584.444) (-1570.600) (-1566.776) [-1570.344] * (-1569.079) [-1564.985] (-1593.017) (-1570.712) -- 0:04:11
538000 -- (-1605.168) [-1572.541] (-1578.876) (-1571.790) * (-1585.951) [-1568.973] (-1598.827) (-1580.502) -- 0:04:11
539000 -- (-1588.132) (-1587.849) (-1571.045) [-1567.548] * (-1571.070) (-1572.849) (-1583.950) [-1576.683] -- 0:04:10
540000 -- (-1584.287) (-1580.458) [-1567.775] (-1566.326) * (-1574.940) (-1572.020) [-1566.642] (-1575.533) -- 0:04:10
Average standard deviation of split frequencies: 0.009315
541000 -- (-1598.686) (-1565.068) (-1584.690) [-1565.076] * (-1598.852) (-1571.055) [-1570.264] (-1589.614) -- 0:04:10
542000 -- (-1596.435) (-1581.743) [-1570.904] (-1573.315) * (-1580.068) [-1591.597] (-1570.119) (-1583.031) -- 0:04:09
543000 -- (-1595.782) [-1570.515] (-1568.449) (-1568.744) * (-1587.722) (-1569.524) [-1573.229] (-1580.514) -- 0:04:09
544000 -- (-1587.511) [-1568.375] (-1570.227) (-1591.691) * (-1592.235) (-1579.239) [-1569.182] (-1574.921) -- 0:04:08
545000 -- (-1587.369) (-1570.340) (-1583.910) [-1567.512] * (-1586.406) (-1586.944) (-1575.762) [-1576.392] -- 0:04:07
Average standard deviation of split frequencies: 0.008889
546000 -- (-1583.267) (-1589.065) (-1593.826) [-1564.628] * [-1578.286] (-1585.177) (-1591.351) (-1578.681) -- 0:04:06
547000 -- (-1587.178) (-1572.951) (-1588.473) [-1570.411] * [-1569.945] (-1574.590) (-1583.599) (-1572.192) -- 0:04:06
548000 -- (-1580.533) [-1574.685] (-1596.069) (-1579.703) * [-1573.546] (-1592.942) (-1584.291) (-1579.517) -- 0:04:05
549000 -- (-1571.729) [-1579.790] (-1576.814) (-1579.138) * [-1575.564] (-1599.612) (-1589.827) (-1571.529) -- 0:04:05
550000 -- (-1574.873) [-1567.911] (-1583.882) (-1600.880) * (-1583.088) (-1584.673) (-1592.210) [-1564.446] -- 0:04:05
Average standard deviation of split frequencies: 0.009085
551000 -- (-1584.299) (-1574.687) [-1567.664] (-1569.183) * (-1584.006) (-1574.950) (-1581.112) [-1567.839] -- 0:04:04
552000 -- (-1583.121) (-1572.478) [-1571.268] (-1584.920) * [-1580.490] (-1577.761) (-1580.524) (-1590.849) -- 0:04:04
553000 -- [-1573.474] (-1594.038) (-1568.402) (-1576.279) * [-1570.961] (-1576.851) (-1591.593) (-1582.468) -- 0:04:03
554000 -- [-1577.098] (-1567.478) (-1585.856) (-1579.403) * (-1571.169) (-1577.317) [-1574.277] (-1585.775) -- 0:04:03
555000 -- [-1562.679] (-1603.163) (-1572.434) (-1574.203) * [-1569.281] (-1568.292) (-1587.887) (-1580.703) -- 0:04:02
Average standard deviation of split frequencies: 0.008996
556000 -- (-1591.429) (-1579.182) [-1570.323] (-1574.865) * (-1581.821) (-1565.021) [-1579.604] (-1577.456) -- 0:04:01
557000 -- (-1576.005) [-1567.665] (-1577.239) (-1563.925) * [-1576.819] (-1575.057) (-1576.305) (-1613.671) -- 0:04:00
558000 -- (-1571.120) (-1570.424) (-1590.509) [-1563.162] * (-1589.964) (-1582.330) (-1581.359) [-1576.682] -- 0:04:00
559000 -- (-1569.427) (-1579.493) (-1574.201) [-1579.611] * (-1566.425) [-1562.758] (-1586.285) (-1584.096) -- 0:04:00
560000 -- (-1563.290) (-1591.514) (-1582.181) [-1566.202] * (-1585.109) (-1562.939) (-1571.987) [-1571.952] -- 0:03:59
Average standard deviation of split frequencies: 0.008622
561000 -- [-1567.649] (-1580.593) (-1572.748) (-1581.893) * (-1585.848) (-1577.056) [-1578.679] (-1580.254) -- 0:03:59
562000 -- (-1575.899) [-1571.771] (-1582.935) (-1580.397) * (-1591.873) (-1577.660) [-1567.432] (-1569.275) -- 0:03:58
563000 -- (-1575.076) [-1583.931] (-1579.913) (-1572.277) * (-1600.182) [-1576.067] (-1583.007) (-1567.487) -- 0:03:58
564000 -- (-1584.386) (-1581.422) [-1570.528] (-1589.748) * (-1601.472) [-1581.413] (-1586.883) (-1569.864) -- 0:03:57
565000 -- (-1576.991) (-1587.735) (-1596.443) [-1565.011] * (-1573.761) [-1576.009] (-1589.786) (-1569.327) -- 0:03:57
Average standard deviation of split frequencies: 0.008083
566000 -- (-1575.924) (-1618.735) [-1580.347] (-1575.384) * (-1572.287) [-1570.050] (-1571.170) (-1575.461) -- 0:03:56
567000 -- (-1572.010) (-1584.850) (-1570.589) [-1571.912] * (-1571.103) [-1566.802] (-1579.695) (-1577.396) -- 0:03:55
568000 -- [-1566.873] (-1583.687) (-1578.172) (-1572.175) * [-1573.685] (-1584.669) (-1578.625) (-1578.955) -- 0:03:55
569000 -- [-1563.520] (-1599.159) (-1586.730) (-1577.160) * (-1575.370) [-1572.804] (-1584.717) (-1571.683) -- 0:03:54
570000 -- (-1577.142) (-1589.249) (-1585.758) [-1569.647] * (-1588.404) [-1570.437] (-1594.020) (-1582.122) -- 0:03:54
Average standard deviation of split frequencies: 0.008640
571000 -- (-1586.990) (-1567.262) [-1563.076] (-1597.095) * (-1600.194) (-1576.265) [-1574.455] (-1575.585) -- 0:03:53
572000 -- (-1579.503) [-1569.409] (-1573.215) (-1586.789) * [-1573.672] (-1567.662) (-1581.691) (-1573.867) -- 0:03:53
573000 -- (-1590.707) [-1579.603] (-1566.292) (-1574.698) * (-1576.747) [-1582.376] (-1592.260) (-1566.781) -- 0:03:52
574000 -- (-1594.213) (-1573.021) [-1565.604] (-1575.852) * (-1588.658) (-1571.462) (-1572.049) [-1569.014] -- 0:03:52
575000 -- (-1576.017) (-1583.537) (-1580.249) [-1586.579] * [-1565.412] (-1578.496) (-1568.082) (-1582.630) -- 0:03:51
Average standard deviation of split frequencies: 0.008734
576000 -- [-1575.555] (-1578.201) (-1571.421) (-1582.924) * (-1583.807) (-1583.710) [-1564.857] (-1583.120) -- 0:03:51
577000 -- (-1584.208) (-1562.405) [-1574.964] (-1600.021) * [-1558.072] (-1571.685) (-1576.551) (-1589.974) -- 0:03:50
578000 -- (-1595.435) (-1575.228) [-1565.380] (-1584.889) * [-1563.535] (-1576.394) (-1574.984) (-1579.205) -- 0:03:49
579000 -- [-1572.286] (-1578.991) (-1571.490) (-1574.600) * (-1572.887) [-1577.914] (-1580.433) (-1582.285) -- 0:03:49
580000 -- [-1572.568] (-1595.067) (-1575.569) (-1577.488) * (-1568.973) (-1573.423) (-1598.747) [-1563.966] -- 0:03:48
Average standard deviation of split frequencies: 0.008470
581000 -- (-1567.951) (-1580.011) (-1592.387) [-1570.579] * (-1596.243) [-1564.091] (-1581.370) (-1566.179) -- 0:03:48
582000 -- [-1580.470] (-1569.500) (-1573.382) (-1575.869) * [-1575.723] (-1566.679) (-1579.396) (-1580.113) -- 0:03:47
583000 -- (-1573.388) (-1589.711) [-1574.674] (-1567.607) * (-1586.113) (-1579.231) [-1580.875] (-1581.999) -- 0:03:47
584000 -- [-1573.507] (-1572.611) (-1579.222) (-1577.900) * (-1590.614) [-1576.415] (-1572.016) (-1587.273) -- 0:03:46
585000 -- (-1575.730) (-1565.640) [-1572.873] (-1577.781) * (-1588.407) [-1565.775] (-1563.572) (-1592.148) -- 0:03:46
Average standard deviation of split frequencies: 0.008499
586000 -- (-1582.549) [-1570.766] (-1585.815) (-1573.312) * (-1573.241) [-1575.131] (-1578.716) (-1586.492) -- 0:03:45
587000 -- (-1571.523) (-1575.888) (-1582.733) [-1569.830] * (-1563.570) [-1569.070] (-1580.843) (-1590.759) -- 0:03:45
588000 -- (-1577.970) (-1579.089) (-1592.683) [-1572.278] * (-1569.506) (-1567.122) [-1572.485] (-1585.586) -- 0:03:44
589000 -- (-1570.435) (-1566.369) [-1569.124] (-1586.218) * [-1567.416] (-1599.666) (-1586.508) (-1571.968) -- 0:03:43
590000 -- (-1572.768) [-1572.693] (-1571.757) (-1573.987) * (-1574.323) (-1584.038) (-1572.549) [-1567.591] -- 0:03:43
Average standard deviation of split frequencies: 0.008112
591000 -- [-1570.521] (-1577.796) (-1581.133) (-1566.081) * (-1584.480) (-1572.666) (-1575.783) [-1567.325] -- 0:03:42
592000 -- (-1574.173) (-1597.830) (-1587.732) [-1578.321] * (-1611.014) [-1567.014] (-1607.367) (-1575.184) -- 0:03:41
593000 -- (-1572.095) (-1570.225) (-1590.556) [-1580.779] * [-1577.174] (-1579.506) (-1589.997) (-1561.759) -- 0:03:41
594000 -- (-1566.220) [-1568.487] (-1582.383) (-1586.203) * (-1595.303) [-1577.959] (-1575.463) (-1574.766) -- 0:03:41
595000 -- (-1588.652) [-1569.130] (-1577.080) (-1581.285) * (-1585.446) (-1583.482) (-1574.201) [-1565.221] -- 0:03:40
Average standard deviation of split frequencies: 0.008218
596000 -- [-1574.397] (-1574.884) (-1585.491) (-1585.902) * (-1584.781) (-1576.290) (-1583.794) [-1569.780] -- 0:03:40
597000 -- (-1582.641) (-1568.526) [-1570.615] (-1580.012) * (-1582.362) (-1573.443) [-1576.979] (-1565.794) -- 0:03:39
598000 -- (-1594.659) [-1568.564] (-1589.180) (-1580.747) * (-1584.644) (-1579.621) [-1569.005] (-1562.474) -- 0:03:39
599000 -- (-1585.236) [-1568.987] (-1600.564) (-1576.928) * (-1572.708) (-1589.008) [-1573.715] (-1573.596) -- 0:03:38
600000 -- (-1600.383) (-1576.164) (-1572.377) [-1573.456] * [-1573.106] (-1597.477) (-1586.149) (-1579.652) -- 0:03:38
Average standard deviation of split frequencies: 0.007577
601000 -- (-1590.920) [-1565.866] (-1579.456) (-1572.417) * (-1568.720) (-1572.618) [-1565.686] (-1578.995) -- 0:03:37
602000 -- (-1588.993) [-1557.724] (-1577.197) (-1587.424) * (-1566.685) (-1571.299) (-1583.872) [-1568.669] -- 0:03:36
603000 -- [-1573.827] (-1573.788) (-1573.505) (-1594.952) * (-1586.558) (-1584.689) (-1585.033) [-1568.331] -- 0:03:35
604000 -- (-1588.289) (-1576.620) (-1586.795) [-1562.140] * (-1565.864) [-1572.673] (-1561.451) (-1584.648) -- 0:03:35
605000 -- (-1570.226) (-1597.765) (-1591.087) [-1567.138] * (-1579.695) [-1577.764] (-1583.931) (-1582.554) -- 0:03:35
Average standard deviation of split frequencies: 0.007383
606000 -- (-1570.547) (-1583.277) (-1592.136) [-1571.461] * (-1580.380) (-1587.142) (-1581.549) [-1575.779] -- 0:03:34
607000 -- (-1572.352) (-1589.339) (-1596.578) [-1567.539] * (-1580.515) (-1600.081) (-1583.143) [-1564.960] -- 0:03:34
608000 -- [-1574.500] (-1597.548) (-1586.358) (-1570.155) * (-1580.066) (-1580.410) [-1581.894] (-1556.004) -- 0:03:33
609000 -- [-1570.349] (-1587.514) (-1581.098) (-1573.894) * (-1575.797) [-1576.828] (-1584.741) (-1572.996) -- 0:03:33
610000 -- [-1572.306] (-1576.532) (-1577.795) (-1585.894) * [-1566.288] (-1562.311) (-1575.469) (-1570.367) -- 0:03:32
Average standard deviation of split frequencies: 0.007405
611000 -- (-1593.841) (-1592.037) [-1573.187] (-1570.991) * (-1584.494) [-1562.578] (-1591.380) (-1579.263) -- 0:03:32
612000 -- (-1604.185) (-1565.570) (-1575.219) [-1564.247] * (-1592.866) (-1573.650) [-1582.591] (-1576.935) -- 0:03:31
613000 -- (-1572.345) [-1564.788] (-1586.311) (-1576.554) * [-1559.125] (-1571.869) (-1575.207) (-1579.750) -- 0:03:30
614000 -- (-1589.327) (-1574.791) (-1577.545) [-1564.750] * (-1568.843) [-1574.189] (-1574.770) (-1583.908) -- 0:03:29
615000 -- (-1580.256) (-1579.966) (-1591.142) [-1571.744] * (-1577.792) (-1577.330) (-1572.579) [-1572.958] -- 0:03:29
Average standard deviation of split frequencies: 0.007264
616000 -- (-1599.191) (-1571.802) (-1576.187) [-1569.755] * [-1569.250] (-1567.965) (-1584.000) (-1585.923) -- 0:03:28
617000 -- (-1594.870) (-1579.727) (-1564.871) [-1571.913] * (-1578.734) (-1594.271) [-1562.111] (-1578.542) -- 0:03:28
618000 -- (-1583.369) (-1584.693) [-1572.063] (-1569.065) * (-1592.579) [-1566.385] (-1570.831) (-1576.065) -- 0:03:28
619000 -- (-1592.683) (-1572.765) (-1573.434) [-1569.413] * (-1589.380) [-1566.693] (-1558.823) (-1598.144) -- 0:03:27
620000 -- (-1583.102) (-1576.216) (-1603.203) [-1568.539] * (-1581.803) [-1569.980] (-1578.441) (-1586.845) -- 0:03:27
Average standard deviation of split frequencies: 0.007019
621000 -- (-1588.168) (-1574.265) (-1594.209) [-1567.076] * (-1592.213) (-1568.151) [-1565.259] (-1597.194) -- 0:03:26
622000 -- (-1579.840) (-1602.304) [-1572.563] (-1581.050) * (-1590.788) (-1583.301) [-1563.879] (-1576.995) -- 0:03:26
623000 -- (-1578.579) (-1570.468) [-1570.326] (-1590.585) * [-1573.739] (-1574.903) (-1569.273) (-1587.869) -- 0:03:25
624000 -- (-1569.389) (-1574.212) [-1569.972] (-1584.259) * (-1576.189) [-1568.859] (-1583.230) (-1583.310) -- 0:03:24
625000 -- [-1559.199] (-1574.937) (-1575.976) (-1567.739) * (-1572.503) (-1586.806) (-1583.510) [-1564.671] -- 0:03:24
Average standard deviation of split frequencies: 0.006959
626000 -- [-1564.650] (-1579.281) (-1572.246) (-1570.423) * (-1583.432) (-1580.355) [-1579.941] (-1571.459) -- 0:03:23
627000 -- [-1562.617] (-1574.605) (-1578.611) (-1567.114) * (-1577.720) (-1597.833) [-1575.949] (-1578.408) -- 0:03:22
628000 -- (-1588.119) (-1571.624) [-1575.497] (-1580.991) * (-1591.797) (-1586.280) [-1567.485] (-1565.831) -- 0:03:22
629000 -- (-1572.991) (-1610.456) (-1597.111) [-1571.346] * (-1578.393) (-1585.997) (-1575.689) [-1569.359] -- 0:03:21
630000 -- [-1571.925] (-1606.751) (-1580.392) (-1566.789) * (-1576.899) [-1567.970] (-1582.494) (-1598.805) -- 0:03:21
Average standard deviation of split frequencies: 0.006895
631000 -- (-1586.297) (-1592.311) [-1567.082] (-1569.038) * (-1591.437) [-1564.185] (-1582.546) (-1590.468) -- 0:03:20
632000 -- (-1564.893) (-1592.791) [-1575.248] (-1584.020) * (-1610.247) (-1588.785) (-1568.282) [-1584.160] -- 0:03:20
633000 -- (-1585.388) (-1610.155) [-1567.986] (-1579.393) * (-1594.466) (-1587.050) [-1570.989] (-1576.738) -- 0:03:20
634000 -- (-1580.054) (-1605.699) [-1564.965] (-1581.174) * (-1575.168) [-1585.754] (-1574.826) (-1590.830) -- 0:03:19
635000 -- (-1581.543) (-1592.669) [-1567.425] (-1589.868) * (-1582.819) [-1569.783] (-1568.996) (-1593.259) -- 0:03:18
Average standard deviation of split frequencies: 0.007501
636000 -- (-1591.066) (-1575.577) [-1573.330] (-1572.645) * (-1585.093) (-1584.731) (-1582.386) [-1579.697] -- 0:03:18
637000 -- (-1581.839) (-1587.707) [-1572.713] (-1567.753) * [-1578.090] (-1571.438) (-1586.124) (-1571.456) -- 0:03:17
638000 -- [-1574.202] (-1586.430) (-1581.753) (-1572.351) * (-1598.837) (-1567.434) (-1574.409) [-1567.643] -- 0:03:16
639000 -- [-1564.741] (-1588.327) (-1578.657) (-1576.518) * (-1591.715) [-1575.220] (-1579.120) (-1576.726) -- 0:03:16
640000 -- [-1568.898] (-1577.234) (-1584.174) (-1566.696) * (-1583.624) (-1574.437) [-1568.026] (-1577.387) -- 0:03:15
Average standard deviation of split frequencies: 0.007624
641000 -- (-1586.114) (-1574.480) (-1578.812) [-1567.932] * (-1595.642) (-1577.972) (-1569.017) [-1579.732] -- 0:03:15
642000 -- (-1572.890) (-1581.961) [-1564.088] (-1561.467) * (-1572.808) [-1572.282] (-1574.539) (-1586.017) -- 0:03:14
643000 -- (-1579.589) (-1572.787) [-1567.978] (-1567.169) * (-1580.361) (-1573.634) [-1564.442] (-1598.022) -- 0:03:14
644000 -- (-1597.032) (-1575.256) (-1575.047) [-1566.260] * [-1571.222] (-1569.808) (-1567.251) (-1583.869) -- 0:03:14
645000 -- [-1570.010] (-1588.000) (-1571.469) (-1579.487) * (-1588.194) (-1570.672) [-1564.006] (-1581.845) -- 0:03:13
Average standard deviation of split frequencies: 0.007637
646000 -- (-1571.873) (-1566.851) (-1586.398) [-1565.456] * (-1568.692) (-1593.467) [-1576.692] (-1563.111) -- 0:03:12
647000 -- [-1565.862] (-1581.570) (-1587.063) (-1573.195) * [-1575.074] (-1590.692) (-1570.513) (-1570.181) -- 0:03:12
648000 -- (-1572.766) [-1570.969] (-1596.252) (-1580.538) * [-1580.022] (-1589.741) (-1568.090) (-1596.003) -- 0:03:11
649000 -- (-1578.536) [-1569.320] (-1575.673) (-1577.049) * (-1585.071) (-1580.250) (-1576.843) [-1564.052] -- 0:03:10
650000 -- (-1604.134) (-1570.164) [-1575.419] (-1576.529) * (-1578.912) [-1579.898] (-1581.432) (-1570.110) -- 0:03:10
Average standard deviation of split frequencies: 0.007482
651000 -- (-1584.034) (-1576.104) (-1580.687) [-1560.227] * [-1578.276] (-1585.451) (-1572.208) (-1582.027) -- 0:03:09
652000 -- (-1583.027) (-1598.820) [-1578.160] (-1582.587) * [-1574.381] (-1578.682) (-1580.373) (-1569.085) -- 0:03:09
653000 -- (-1572.242) (-1589.908) (-1579.306) [-1561.331] * (-1566.276) (-1595.417) [-1565.798] (-1598.168) -- 0:03:08
654000 -- (-1580.051) (-1590.497) [-1566.127] (-1569.396) * [-1567.533] (-1581.720) (-1562.496) (-1582.832) -- 0:03:08
655000 -- (-1569.097) [-1577.805] (-1574.156) (-1571.071) * [-1566.923] (-1593.577) (-1578.685) (-1585.599) -- 0:03:08
Average standard deviation of split frequencies: 0.007400
656000 -- (-1578.610) [-1569.993] (-1567.273) (-1597.775) * (-1574.621) (-1589.929) [-1566.503] (-1582.736) -- 0:03:07
657000 -- (-1567.403) [-1572.508] (-1562.800) (-1598.820) * (-1565.590) [-1582.608] (-1571.466) (-1585.283) -- 0:03:06
658000 -- (-1584.012) (-1586.772) [-1564.402] (-1583.142) * (-1581.829) (-1577.211) [-1572.638] (-1585.510) -- 0:03:06
659000 -- (-1586.025) (-1584.748) (-1576.538) [-1576.736] * [-1565.362] (-1586.084) (-1578.088) (-1593.969) -- 0:03:05
660000 -- [-1567.973] (-1576.071) (-1581.467) (-1569.168) * (-1575.266) [-1570.368] (-1575.027) (-1572.521) -- 0:03:04
Average standard deviation of split frequencies: 0.007234
661000 -- (-1572.852) (-1576.560) (-1572.255) [-1566.329] * [-1569.508] (-1583.007) (-1586.408) (-1580.567) -- 0:03:04
662000 -- (-1587.456) (-1579.107) [-1563.098] (-1589.666) * [-1560.767] (-1574.058) (-1570.731) (-1586.882) -- 0:03:03
663000 -- [-1577.870] (-1579.447) (-1594.215) (-1593.331) * (-1579.452) [-1571.466] (-1576.673) (-1578.504) -- 0:03:03
664000 -- [-1577.488] (-1571.613) (-1574.620) (-1572.874) * [-1566.384] (-1587.805) (-1596.125) (-1572.926) -- 0:03:02
665000 -- [-1570.968] (-1578.812) (-1570.803) (-1579.264) * [-1567.449] (-1579.739) (-1581.296) (-1564.288) -- 0:03:02
Average standard deviation of split frequencies: 0.007102
666000 -- (-1576.146) (-1587.834) (-1577.487) [-1568.274] * [-1567.099] (-1572.416) (-1577.108) (-1588.301) -- 0:03:01
667000 -- (-1592.330) (-1590.689) [-1563.826] (-1581.189) * [-1577.233] (-1571.931) (-1566.172) (-1594.189) -- 0:03:01
668000 -- (-1578.448) (-1584.381) [-1566.133] (-1573.046) * [-1575.394] (-1577.698) (-1599.072) (-1578.037) -- 0:03:00
669000 -- (-1597.139) (-1590.484) [-1566.119] (-1576.786) * [-1564.033] (-1592.921) (-1580.743) (-1574.220) -- 0:03:00
670000 -- (-1603.215) [-1566.780] (-1573.612) (-1586.643) * (-1576.441) [-1570.688] (-1578.090) (-1601.372) -- 0:02:59
Average standard deviation of split frequencies: 0.007303
671000 -- (-1575.779) (-1584.038) (-1571.028) [-1562.767] * (-1583.276) [-1565.300] (-1577.277) (-1580.333) -- 0:02:58
672000 -- [-1568.165] (-1575.082) (-1595.427) (-1583.121) * (-1578.032) [-1572.387] (-1592.017) (-1600.087) -- 0:02:58
673000 -- (-1574.098) (-1573.257) (-1574.036) [-1566.020] * (-1566.617) [-1569.713] (-1574.560) (-1595.653) -- 0:02:57
674000 -- (-1593.037) [-1579.549] (-1578.059) (-1583.094) * (-1573.222) (-1574.026) [-1568.899] (-1580.315) -- 0:02:57
675000 -- (-1576.478) [-1573.266] (-1595.643) (-1579.803) * [-1569.903] (-1574.518) (-1591.177) (-1586.961) -- 0:02:56
Average standard deviation of split frequencies: 0.007334
676000 -- [-1567.895] (-1585.685) (-1591.163) (-1574.358) * (-1563.530) (-1607.400) (-1573.186) [-1576.445] -- 0:02:56
677000 -- (-1571.275) (-1571.722) (-1620.328) [-1572.760] * (-1573.633) [-1566.414] (-1584.862) (-1571.879) -- 0:02:56
678000 -- (-1565.709) [-1579.309] (-1575.584) (-1571.744) * (-1576.515) (-1583.654) (-1585.759) [-1564.385] -- 0:02:55
679000 -- (-1586.540) (-1579.162) (-1562.792) [-1563.158] * (-1589.642) (-1591.691) (-1576.327) [-1563.173] -- 0:02:54
680000 -- (-1593.133) (-1580.977) (-1569.792) [-1570.985] * (-1582.330) [-1573.402] (-1572.669) (-1587.326) -- 0:02:54
Average standard deviation of split frequencies: 0.007320
681000 -- (-1607.258) (-1579.521) (-1576.998) [-1574.150] * (-1574.733) (-1582.623) (-1581.674) [-1577.893] -- 0:02:53
682000 -- (-1612.412) (-1580.909) [-1572.124] (-1575.542) * (-1587.556) (-1576.560) (-1579.455) [-1574.756] -- 0:02:52
683000 -- (-1592.351) (-1577.120) [-1571.921] (-1594.592) * (-1581.844) [-1569.572] (-1579.098) (-1582.131) -- 0:02:52
684000 -- (-1583.613) (-1580.015) (-1582.693) [-1576.810] * (-1588.098) [-1569.499] (-1565.377) (-1573.019) -- 0:02:51
685000 -- (-1578.229) (-1594.852) [-1566.035] (-1596.522) * (-1577.745) [-1565.303] (-1593.223) (-1581.896) -- 0:02:51
Average standard deviation of split frequencies: 0.007442
686000 -- (-1563.418) (-1582.867) (-1571.972) [-1571.038] * (-1567.515) [-1567.877] (-1586.033) (-1575.719) -- 0:02:50
687000 -- [-1558.351] (-1584.857) (-1577.646) (-1572.421) * (-1576.943) [-1561.247] (-1572.428) (-1572.489) -- 0:02:50
688000 -- (-1572.882) [-1575.920] (-1589.600) (-1575.663) * (-1606.417) (-1574.201) [-1568.827] (-1579.965) -- 0:02:50
689000 -- [-1570.788] (-1569.744) (-1579.616) (-1573.071) * (-1589.421) (-1570.106) (-1596.889) [-1574.470] -- 0:02:49
690000 -- (-1598.724) (-1577.907) (-1568.178) [-1569.619] * (-1581.018) [-1586.892] (-1577.980) (-1575.774) -- 0:02:48
Average standard deviation of split frequencies: 0.007184
691000 -- (-1579.980) (-1566.753) [-1570.191] (-1584.690) * [-1567.893] (-1580.232) (-1584.932) (-1580.777) -- 0:02:48
692000 -- (-1582.383) [-1568.606] (-1585.644) (-1586.829) * (-1565.069) (-1580.124) [-1578.385] (-1568.010) -- 0:02:47
693000 -- [-1574.235] (-1561.044) (-1577.867) (-1587.750) * [-1572.431] (-1594.140) (-1572.505) (-1569.465) -- 0:02:47
694000 -- (-1574.032) [-1571.628] (-1584.789) (-1584.209) * (-1566.883) (-1590.048) [-1573.014] (-1570.615) -- 0:02:46
695000 -- (-1585.761) [-1577.585] (-1578.695) (-1570.823) * (-1579.502) (-1580.100) (-1571.935) [-1578.120] -- 0:02:45
Average standard deviation of split frequencies: 0.007123
696000 -- (-1602.842) [-1572.637] (-1575.377) (-1567.839) * [-1566.155] (-1580.931) (-1581.981) (-1578.605) -- 0:02:45
697000 -- (-1583.831) (-1576.156) [-1568.347] (-1573.338) * (-1581.388) (-1597.038) (-1570.990) [-1573.551] -- 0:02:44
698000 -- (-1587.027) [-1564.467] (-1570.836) (-1594.875) * (-1580.798) (-1573.948) (-1580.699) [-1571.523] -- 0:02:44
699000 -- (-1586.096) [-1567.389] (-1571.497) (-1574.317) * (-1579.116) (-1584.955) (-1576.467) [-1575.348] -- 0:02:44
700000 -- (-1581.697) (-1574.130) [-1562.780] (-1579.339) * [-1564.323] (-1566.644) (-1572.408) (-1578.527) -- 0:02:43
Average standard deviation of split frequencies: 0.007285
701000 -- (-1575.954) (-1569.384) [-1560.296] (-1566.378) * [-1573.679] (-1582.128) (-1573.701) (-1578.518) -- 0:02:42
702000 -- (-1574.642) (-1579.390) [-1572.869] (-1571.212) * [-1571.459] (-1580.492) (-1566.549) (-1600.937) -- 0:02:42
703000 -- (-1572.216) (-1590.942) [-1566.468] (-1568.346) * (-1577.897) (-1572.023) [-1562.346] (-1614.933) -- 0:02:41
704000 -- (-1571.704) [-1566.473] (-1570.224) (-1581.034) * [-1580.879] (-1579.128) (-1577.818) (-1594.414) -- 0:02:41
705000 -- [-1564.625] (-1579.702) (-1594.859) (-1580.603) * (-1580.007) (-1581.979) [-1567.995] (-1576.529) -- 0:02:40
Average standard deviation of split frequencies: 0.007322
706000 -- [-1577.316] (-1577.818) (-1567.596) (-1586.909) * (-1583.733) (-1588.602) [-1574.341] (-1581.443) -- 0:02:39
707000 -- [-1571.950] (-1587.742) (-1573.058) (-1581.538) * (-1580.185) [-1576.174] (-1579.297) (-1573.266) -- 0:02:39
708000 -- [-1576.372] (-1577.777) (-1579.143) (-1585.000) * [-1576.160] (-1579.353) (-1586.207) (-1574.506) -- 0:02:38
709000 -- [-1562.872] (-1589.231) (-1572.513) (-1583.856) * (-1577.148) (-1575.796) [-1567.678] (-1567.312) -- 0:02:38
710000 -- (-1567.507) [-1571.263] (-1572.512) (-1570.633) * (-1579.626) (-1578.880) [-1567.091] (-1586.568) -- 0:02:38
Average standard deviation of split frequencies: 0.007173
711000 -- (-1573.781) [-1575.531] (-1575.952) (-1573.482) * (-1584.909) (-1581.146) [-1573.784] (-1582.601) -- 0:02:37
712000 -- [-1561.126] (-1565.917) (-1575.612) (-1575.333) * [-1572.502] (-1578.904) (-1566.265) (-1570.906) -- 0:02:36
713000 -- (-1569.011) [-1571.347] (-1579.477) (-1565.405) * (-1580.968) (-1586.213) [-1574.292] (-1571.419) -- 0:02:36
714000 -- (-1592.092) (-1589.753) [-1569.301] (-1570.992) * (-1583.403) (-1580.897) [-1567.556] (-1573.206) -- 0:02:35
715000 -- (-1569.757) (-1582.174) [-1567.018] (-1566.780) * [-1564.559] (-1586.342) (-1592.422) (-1578.484) -- 0:02:35
Average standard deviation of split frequencies: 0.007242
716000 -- [-1581.015] (-1585.110) (-1573.399) (-1564.237) * [-1558.535] (-1587.208) (-1587.287) (-1576.652) -- 0:02:34
717000 -- (-1575.244) [-1576.142] (-1575.026) (-1585.264) * (-1576.713) (-1567.872) (-1579.489) [-1575.277] -- 0:02:33
718000 -- (-1586.244) [-1573.426] (-1586.369) (-1572.003) * (-1571.623) [-1562.498] (-1587.530) (-1570.566) -- 0:02:33
719000 -- (-1583.469) (-1570.505) [-1577.753] (-1600.391) * [-1578.021] (-1578.848) (-1588.177) (-1582.119) -- 0:02:32
720000 -- (-1576.460) [-1574.087] (-1603.253) (-1583.566) * (-1572.100) (-1583.660) [-1576.600] (-1585.881) -- 0:02:32
Average standard deviation of split frequencies: 0.007365
721000 -- (-1565.550) [-1573.354] (-1586.406) (-1582.175) * (-1578.031) (-1589.618) [-1571.848] (-1575.887) -- 0:02:32
722000 -- (-1576.859) [-1564.908] (-1583.366) (-1589.095) * (-1587.856) (-1596.733) (-1575.887) [-1583.990] -- 0:02:31
723000 -- (-1573.031) (-1569.633) [-1567.389] (-1586.504) * (-1580.874) (-1586.219) [-1563.526] (-1577.598) -- 0:02:30
724000 -- [-1578.184] (-1570.929) (-1564.588) (-1587.126) * [-1573.760] (-1578.476) (-1583.508) (-1565.289) -- 0:02:30
725000 -- [-1566.097] (-1577.408) (-1579.958) (-1587.539) * [-1573.158] (-1592.882) (-1582.608) (-1566.958) -- 0:02:29
Average standard deviation of split frequencies: 0.007264
726000 -- (-1575.441) [-1576.257] (-1574.446) (-1581.868) * (-1600.763) (-1587.024) (-1570.258) [-1565.352] -- 0:02:29
727000 -- [-1571.169] (-1578.831) (-1590.585) (-1572.612) * (-1581.263) (-1588.808) [-1566.078] (-1573.894) -- 0:02:28
728000 -- (-1594.230) [-1580.295] (-1578.844) (-1589.094) * (-1574.428) (-1584.871) [-1569.979] (-1576.799) -- 0:02:27
729000 -- (-1565.918) [-1561.359] (-1566.113) (-1586.234) * [-1571.823] (-1582.767) (-1569.978) (-1568.219) -- 0:02:27
730000 -- [-1567.346] (-1570.831) (-1574.189) (-1589.683) * (-1570.307) [-1565.780] (-1563.990) (-1580.198) -- 0:02:26
Average standard deviation of split frequencies: 0.007272
731000 -- (-1580.213) (-1589.359) (-1582.921) [-1577.296] * (-1586.118) (-1572.760) (-1579.962) [-1582.817] -- 0:02:26
732000 -- (-1574.242) [-1587.442] (-1588.914) (-1578.273) * (-1579.835) (-1565.060) [-1575.310] (-1569.838) -- 0:02:25
733000 -- (-1575.241) (-1574.779) (-1580.830) [-1573.551] * (-1573.230) (-1571.866) [-1565.541] (-1566.595) -- 0:02:25
734000 -- [-1565.098] (-1583.633) (-1564.162) (-1578.681) * (-1567.828) (-1586.015) (-1573.101) [-1560.175] -- 0:02:24
735000 -- [-1562.903] (-1582.837) (-1569.876) (-1599.062) * (-1569.194) (-1586.232) (-1582.482) [-1568.727] -- 0:02:24
Average standard deviation of split frequencies: 0.007388
736000 -- [-1561.796] (-1587.024) (-1584.775) (-1581.071) * (-1584.651) (-1579.408) [-1569.143] (-1586.744) -- 0:02:23
737000 -- [-1569.806] (-1585.583) (-1577.305) (-1581.485) * [-1567.547] (-1576.914) (-1577.268) (-1578.154) -- 0:02:23
738000 -- (-1590.073) [-1582.628] (-1577.862) (-1594.511) * [-1570.122] (-1574.864) (-1575.647) (-1577.836) -- 0:02:22
739000 -- (-1591.302) (-1587.175) [-1569.865] (-1575.255) * [-1575.123] (-1572.853) (-1592.740) (-1583.862) -- 0:02:21
740000 -- (-1595.141) (-1568.055) [-1575.484] (-1587.055) * (-1593.180) (-1581.792) (-1578.311) [-1575.013] -- 0:02:21
Average standard deviation of split frequencies: 0.007374
741000 -- (-1612.573) (-1580.025) [-1582.738] (-1581.410) * [-1581.697] (-1587.159) (-1577.391) (-1573.160) -- 0:02:20
742000 -- (-1584.691) (-1575.765) [-1579.071] (-1578.493) * [-1569.131] (-1570.936) (-1572.446) (-1572.812) -- 0:02:20
743000 -- (-1583.801) (-1585.683) [-1572.508] (-1573.667) * [-1562.321] (-1566.139) (-1582.771) (-1563.833) -- 0:02:19
744000 -- (-1573.435) (-1579.259) [-1572.709] (-1598.170) * (-1572.132) [-1572.131] (-1582.326) (-1572.328) -- 0:02:19
745000 -- (-1570.747) [-1569.123] (-1581.870) (-1571.723) * [-1564.420] (-1587.301) (-1575.436) (-1587.768) -- 0:02:18
Average standard deviation of split frequencies: 0.007060
746000 -- (-1567.891) (-1587.379) [-1568.310] (-1599.688) * (-1585.390) (-1573.009) [-1571.451] (-1572.561) -- 0:02:18
747000 -- [-1564.547] (-1570.299) (-1574.939) (-1581.808) * (-1587.844) (-1569.615) [-1559.592] (-1567.504) -- 0:02:17
748000 -- [-1569.354] (-1579.145) (-1574.484) (-1587.305) * [-1569.843] (-1584.039) (-1575.120) (-1565.264) -- 0:02:17
749000 -- (-1569.528) (-1573.466) [-1570.778] (-1597.836) * (-1569.009) (-1584.647) (-1569.628) [-1567.214] -- 0:02:16
750000 -- (-1594.438) [-1569.171] (-1569.118) (-1590.541) * (-1611.301) (-1573.826) (-1568.814) [-1575.609] -- 0:02:16
Average standard deviation of split frequencies: 0.007319
751000 -- (-1568.904) [-1564.969] (-1583.936) (-1581.657) * (-1569.829) [-1575.318] (-1587.052) (-1575.501) -- 0:02:15
752000 -- (-1572.896) [-1571.949] (-1591.380) (-1579.722) * (-1576.399) [-1573.599] (-1581.824) (-1568.639) -- 0:02:14
753000 -- (-1570.137) (-1583.974) (-1579.656) [-1561.419] * [-1565.611] (-1572.491) (-1574.194) (-1560.326) -- 0:02:14
754000 -- (-1593.030) (-1580.055) [-1569.392] (-1575.347) * (-1565.730) [-1574.517] (-1568.933) (-1565.335) -- 0:02:13
755000 -- (-1586.626) (-1577.218) (-1572.264) [-1574.400] * (-1560.470) [-1581.571] (-1568.903) (-1582.401) -- 0:02:13
Average standard deviation of split frequencies: 0.007386
756000 -- (-1572.386) [-1565.277] (-1597.023) (-1577.092) * (-1567.452) (-1569.514) (-1579.792) [-1571.709] -- 0:02:12
757000 -- (-1575.632) (-1592.600) [-1577.276] (-1578.493) * [-1568.444] (-1589.757) (-1598.865) (-1570.834) -- 0:02:12
758000 -- (-1578.663) (-1564.402) (-1585.218) [-1564.820] * (-1579.847) (-1584.314) [-1572.388] (-1572.425) -- 0:02:11
759000 -- (-1568.217) (-1568.407) [-1568.142] (-1574.854) * (-1577.120) (-1575.993) (-1578.878) [-1571.164] -- 0:02:11
760000 -- (-1587.350) [-1573.629] (-1571.727) (-1564.280) * (-1571.069) [-1567.294] (-1576.806) (-1566.713) -- 0:02:10
Average standard deviation of split frequencies: 0.007287
761000 -- (-1582.166) (-1579.789) [-1572.793] (-1577.646) * (-1579.235) [-1567.043] (-1587.744) (-1587.734) -- 0:02:10
762000 -- (-1581.692) (-1572.740) [-1580.193] (-1567.570) * (-1577.968) (-1568.987) (-1590.384) [-1577.361] -- 0:02:09
763000 -- (-1571.636) (-1593.746) [-1572.532] (-1574.407) * (-1573.415) (-1565.803) [-1582.266] (-1601.985) -- 0:02:08
764000 -- (-1570.565) (-1583.193) [-1574.510] (-1578.204) * [-1567.010] (-1571.113) (-1580.801) (-1591.437) -- 0:02:08
765000 -- [-1571.181] (-1577.393) (-1587.924) (-1576.624) * [-1581.358] (-1583.311) (-1590.323) (-1589.076) -- 0:02:07
Average standard deviation of split frequencies: 0.007173
766000 -- (-1573.684) [-1577.129] (-1580.407) (-1587.308) * (-1575.278) (-1590.849) (-1593.760) [-1573.188] -- 0:02:07
767000 -- (-1578.592) (-1582.158) [-1563.139] (-1615.458) * [-1566.707] (-1572.442) (-1576.304) (-1586.099) -- 0:02:06
768000 -- (-1584.452) [-1564.259] (-1576.838) (-1601.476) * (-1589.909) (-1587.363) (-1593.673) [-1576.325] -- 0:02:06
769000 -- (-1611.341) (-1569.908) (-1575.838) [-1578.962] * (-1596.095) [-1571.309] (-1573.695) (-1576.492) -- 0:02:05
770000 -- (-1579.861) [-1573.900] (-1601.134) (-1583.232) * (-1573.889) (-1574.100) [-1561.393] (-1587.086) -- 0:02:05
Average standard deviation of split frequencies: 0.006857
771000 -- (-1576.314) (-1568.548) (-1568.512) [-1565.741] * (-1575.759) (-1584.890) (-1565.775) [-1567.792] -- 0:02:04
772000 -- (-1585.349) (-1579.423) [-1562.620] (-1573.049) * (-1590.152) [-1571.219] (-1592.086) (-1564.489) -- 0:02:04
773000 -- (-1581.290) (-1577.351) [-1564.619] (-1567.353) * (-1593.126) (-1580.543) (-1580.841) [-1554.005] -- 0:02:03
774000 -- (-1599.346) (-1579.039) (-1568.994) [-1566.731] * (-1579.466) [-1568.570] (-1569.588) (-1595.068) -- 0:02:02
775000 -- [-1571.305] (-1573.605) (-1583.428) (-1573.399) * (-1582.974) [-1576.198] (-1577.653) (-1589.484) -- 0:02:02
Average standard deviation of split frequencies: 0.006608
776000 -- (-1567.444) [-1559.570] (-1571.976) (-1579.953) * (-1587.329) (-1574.178) (-1572.927) [-1580.103] -- 0:02:01
777000 -- (-1593.723) [-1559.777] (-1583.929) (-1582.733) * (-1579.494) [-1580.290] (-1563.775) (-1585.209) -- 0:02:01
778000 -- (-1585.240) (-1567.476) (-1578.266) [-1565.932] * (-1588.824) [-1576.964] (-1580.257) (-1584.330) -- 0:02:00
779000 -- (-1585.041) (-1576.887) [-1568.730] (-1573.400) * (-1571.558) [-1568.440] (-1580.714) (-1591.094) -- 0:02:00
780000 -- (-1576.022) [-1573.879] (-1588.478) (-1578.943) * (-1579.812) (-1573.830) (-1568.750) [-1564.327] -- 0:01:59
Average standard deviation of split frequencies: 0.006706
781000 -- (-1580.673) [-1567.543] (-1591.900) (-1569.942) * (-1578.730) (-1581.180) (-1581.232) [-1569.424] -- 0:01:59
782000 -- (-1576.330) [-1563.010] (-1579.641) (-1572.609) * [-1580.781] (-1567.950) (-1578.438) (-1572.918) -- 0:01:58
783000 -- [-1566.728] (-1574.913) (-1580.748) (-1594.130) * (-1577.206) (-1570.848) (-1576.484) [-1571.642] -- 0:01:58
784000 -- (-1579.033) [-1565.943] (-1580.134) (-1596.550) * (-1605.819) (-1577.644) [-1566.665] (-1570.290) -- 0:01:57
785000 -- (-1570.708) [-1579.291] (-1573.833) (-1592.946) * [-1577.632] (-1579.441) (-1579.437) (-1569.866) -- 0:01:56
Average standard deviation of split frequencies: 0.006533
786000 -- (-1589.618) (-1582.182) [-1564.803] (-1572.146) * [-1564.231] (-1572.347) (-1591.758) (-1578.702) -- 0:01:56
787000 -- (-1583.070) (-1591.041) (-1571.574) [-1572.783] * [-1565.719] (-1577.804) (-1595.367) (-1582.512) -- 0:01:55
788000 -- (-1566.493) (-1598.131) [-1566.513] (-1584.484) * (-1574.564) [-1569.391] (-1597.440) (-1582.971) -- 0:01:55
789000 -- (-1577.722) (-1587.752) [-1572.304] (-1584.460) * [-1565.639] (-1576.102) (-1585.592) (-1578.214) -- 0:01:54
790000 -- [-1567.816] (-1580.660) (-1587.499) (-1586.083) * [-1566.512] (-1569.174) (-1586.947) (-1588.034) -- 0:01:54
Average standard deviation of split frequencies: 0.006367
791000 -- (-1577.105) (-1578.363) [-1561.969] (-1578.709) * (-1574.785) (-1561.058) (-1577.610) [-1575.271] -- 0:01:53
792000 -- (-1578.763) (-1562.975) (-1576.591) [-1571.379] * (-1574.225) [-1564.802] (-1576.627) (-1593.258) -- 0:01:53
793000 -- [-1574.867] (-1577.252) (-1566.369) (-1592.263) * (-1575.930) (-1579.947) (-1575.125) [-1569.288] -- 0:01:52
794000 -- (-1573.966) [-1571.023] (-1570.349) (-1580.908) * [-1575.084] (-1573.941) (-1572.714) (-1587.402) -- 0:01:52
795000 -- (-1579.537) (-1583.796) [-1573.579] (-1577.116) * (-1575.676) [-1583.113] (-1579.113) (-1602.649) -- 0:01:51
Average standard deviation of split frequencies: 0.006514
796000 -- (-1579.856) [-1566.396] (-1583.191) (-1568.475) * (-1590.645) (-1597.804) (-1581.296) [-1565.937] -- 0:01:50
797000 -- (-1573.792) [-1569.657] (-1582.639) (-1603.541) * [-1562.022] (-1598.449) (-1573.019) (-1578.015) -- 0:01:50
798000 -- (-1570.860) (-1573.580) [-1572.570] (-1586.258) * (-1585.989) (-1568.960) (-1575.295) [-1566.769] -- 0:01:49
799000 -- (-1586.529) [-1580.809] (-1566.607) (-1582.771) * (-1580.922) (-1568.375) [-1583.482] (-1578.436) -- 0:01:49
800000 -- (-1567.829) [-1575.942] (-1578.784) (-1594.500) * (-1584.421) [-1567.725] (-1562.417) (-1580.338) -- 0:01:48
Average standard deviation of split frequencies: 0.006487
801000 -- (-1585.674) [-1584.975] (-1573.633) (-1577.288) * (-1575.484) [-1570.582] (-1584.036) (-1579.608) -- 0:01:48
802000 -- [-1578.415] (-1584.769) (-1579.245) (-1569.053) * (-1592.061) [-1565.080] (-1579.035) (-1569.342) -- 0:01:47
803000 -- [-1574.611] (-1588.422) (-1576.906) (-1578.652) * [-1568.591] (-1578.286) (-1575.938) (-1576.639) -- 0:01:47
804000 -- [-1566.505] (-1572.502) (-1590.950) (-1578.045) * (-1579.823) (-1574.452) [-1574.037] (-1577.558) -- 0:01:46
805000 -- (-1599.868) [-1572.669] (-1573.336) (-1569.689) * (-1589.631) (-1578.919) [-1572.069] (-1571.350) -- 0:01:46
Average standard deviation of split frequencies: 0.006639
806000 -- (-1565.787) (-1585.648) (-1569.995) [-1569.508] * (-1578.074) (-1576.050) [-1576.334] (-1569.224) -- 0:01:45
807000 -- (-1573.006) [-1570.183] (-1571.638) (-1579.995) * (-1587.389) (-1570.067) [-1575.927] (-1577.048) -- 0:01:44
808000 -- (-1579.021) [-1567.265] (-1570.894) (-1580.356) * (-1586.861) (-1565.758) [-1571.953] (-1582.064) -- 0:01:44
809000 -- (-1584.378) (-1576.158) [-1568.205] (-1580.046) * (-1575.856) [-1578.683] (-1588.804) (-1577.873) -- 0:01:43
810000 -- (-1569.339) [-1568.523] (-1576.546) (-1588.321) * (-1580.439) (-1589.437) [-1583.331] (-1567.096) -- 0:01:43
Average standard deviation of split frequencies: 0.006523
811000 -- (-1579.630) (-1592.221) (-1587.305) [-1574.230] * (-1578.116) (-1578.591) (-1595.491) [-1569.803] -- 0:01:42
812000 -- (-1581.587) (-1566.630) (-1581.318) [-1570.411] * [-1562.084] (-1578.570) (-1594.590) (-1573.618) -- 0:01:42
813000 -- (-1579.631) (-1566.353) [-1578.862] (-1574.268) * (-1567.746) (-1589.531) [-1568.820] (-1573.007) -- 0:01:41
814000 -- (-1578.684) (-1569.306) [-1571.553] (-1591.926) * (-1587.592) (-1583.853) [-1578.063] (-1570.596) -- 0:01:41
815000 -- [-1584.281] (-1574.688) (-1569.011) (-1591.244) * (-1586.593) (-1577.172) (-1571.643) [-1567.455] -- 0:01:40
Average standard deviation of split frequencies: 0.006237
816000 -- (-1581.636) [-1565.298] (-1586.451) (-1596.317) * (-1590.876) [-1582.996] (-1581.389) (-1575.935) -- 0:01:40
817000 -- [-1567.782] (-1571.159) (-1577.548) (-1584.906) * [-1567.541] (-1576.350) (-1579.929) (-1584.598) -- 0:01:39
818000 -- (-1568.711) [-1566.844] (-1587.997) (-1574.785) * (-1583.779) [-1567.550] (-1601.430) (-1574.920) -- 0:01:39
819000 -- [-1575.962] (-1577.328) (-1592.207) (-1572.709) * (-1581.542) (-1575.197) (-1582.714) [-1584.637] -- 0:01:38
820000 -- [-1574.296] (-1579.950) (-1587.072) (-1590.341) * (-1595.752) (-1580.057) (-1568.588) [-1570.979] -- 0:01:37
Average standard deviation of split frequencies: 0.006489
821000 -- (-1586.285) [-1569.976] (-1574.722) (-1574.838) * (-1581.887) [-1578.881] (-1590.409) (-1576.417) -- 0:01:37
822000 -- [-1572.506] (-1592.376) (-1581.835) (-1586.560) * (-1575.573) (-1579.324) (-1590.688) [-1561.862] -- 0:01:36
823000 -- (-1572.658) (-1574.006) (-1570.371) [-1579.473] * (-1582.634) (-1577.065) (-1585.060) [-1575.185] -- 0:01:36
824000 -- [-1576.244] (-1592.142) (-1575.548) (-1574.737) * (-1576.595) [-1576.587] (-1580.866) (-1580.768) -- 0:01:35
825000 -- (-1569.144) (-1604.388) [-1560.218] (-1597.514) * (-1579.031) [-1569.217] (-1584.102) (-1571.722) -- 0:01:35
Average standard deviation of split frequencies: 0.006755
826000 -- [-1568.921] (-1598.096) (-1566.499) (-1576.984) * (-1568.983) [-1568.196] (-1587.477) (-1583.970) -- 0:01:34
827000 -- (-1571.235) (-1586.723) [-1570.933] (-1565.905) * (-1596.273) [-1569.967] (-1576.971) (-1567.384) -- 0:01:34
828000 -- [-1570.931] (-1568.141) (-1615.567) (-1571.744) * (-1605.190) [-1581.462] (-1577.198) (-1572.790) -- 0:01:33
829000 -- (-1575.169) [-1563.378] (-1603.937) (-1588.791) * (-1568.417) (-1579.011) (-1596.401) [-1567.022] -- 0:01:33
830000 -- [-1565.376] (-1576.112) (-1582.801) (-1567.103) * [-1568.833] (-1590.939) (-1582.666) (-1569.174) -- 0:01:32
Average standard deviation of split frequencies: 0.006757
831000 -- (-1574.065) (-1573.313) [-1569.391] (-1571.133) * [-1562.059] (-1570.169) (-1585.049) (-1578.132) -- 0:01:31
832000 -- (-1594.799) (-1562.711) (-1570.415) [-1561.227] * [-1562.837] (-1582.773) (-1585.903) (-1580.500) -- 0:01:31
833000 -- (-1582.434) [-1568.241] (-1583.662) (-1568.522) * (-1575.197) (-1582.718) (-1588.517) [-1573.634] -- 0:01:30
834000 -- [-1570.327] (-1583.842) (-1571.751) (-1574.518) * (-1585.808) (-1592.140) (-1583.691) [-1582.380] -- 0:01:30
835000 -- (-1578.944) [-1571.193] (-1575.548) (-1569.964) * (-1580.828) [-1572.086] (-1568.125) (-1578.753) -- 0:01:29
Average standard deviation of split frequencies: 0.006902
836000 -- [-1566.881] (-1561.512) (-1582.140) (-1582.667) * (-1594.445) (-1584.692) (-1575.295) [-1571.602] -- 0:01:29
837000 -- (-1577.611) [-1566.427] (-1593.736) (-1575.196) * (-1587.630) (-1579.851) (-1587.637) [-1568.906] -- 0:01:28
838000 -- (-1574.846) (-1570.623) [-1570.833] (-1589.586) * (-1589.357) (-1575.111) (-1578.037) [-1575.964] -- 0:01:28
839000 -- (-1577.136) (-1592.946) (-1570.664) [-1572.431] * [-1566.611] (-1586.785) (-1568.921) (-1580.382) -- 0:01:27
840000 -- (-1572.685) (-1587.129) [-1581.521] (-1583.652) * [-1572.590] (-1583.834) (-1573.821) (-1580.939) -- 0:01:27
Average standard deviation of split frequencies: 0.006902
841000 -- (-1596.443) (-1586.471) (-1578.478) [-1575.150] * (-1575.315) (-1567.586) [-1580.498] (-1576.713) -- 0:01:26
842000 -- (-1566.678) [-1577.106] (-1589.956) (-1585.787) * (-1573.764) (-1577.557) (-1593.793) [-1570.045] -- 0:01:25
843000 -- (-1574.197) [-1573.476] (-1573.386) (-1577.586) * (-1576.892) (-1575.698) [-1566.789] (-1570.677) -- 0:01:25
844000 -- [-1569.277] (-1566.813) (-1566.877) (-1592.868) * (-1569.629) (-1587.038) (-1573.801) [-1562.333] -- 0:01:24
845000 -- (-1593.368) [-1569.263] (-1567.659) (-1580.861) * [-1571.383] (-1589.086) (-1591.463) (-1567.543) -- 0:01:24
Average standard deviation of split frequencies: 0.006896
846000 -- (-1599.975) [-1575.658] (-1564.295) (-1591.138) * [-1572.853] (-1566.314) (-1571.673) (-1590.081) -- 0:01:23
847000 -- (-1583.402) (-1582.357) (-1574.205) [-1580.471] * [-1563.769] (-1561.311) (-1580.767) (-1588.467) -- 0:01:23
848000 -- [-1573.594] (-1581.837) (-1581.373) (-1567.629) * (-1575.146) (-1587.244) [-1569.613] (-1571.200) -- 0:01:22
849000 -- (-1583.901) (-1566.641) (-1580.958) [-1567.333] * (-1582.034) (-1578.809) [-1566.094] (-1592.628) -- 0:01:22
850000 -- (-1580.365) (-1585.204) (-1575.435) [-1567.570] * (-1578.951) (-1567.629) (-1565.443) [-1569.520] -- 0:01:21
Average standard deviation of split frequencies: 0.006818
851000 -- (-1594.591) [-1566.182] (-1581.500) (-1576.386) * (-1575.027) (-1567.367) (-1568.583) [-1580.911] -- 0:01:21
852000 -- [-1568.470] (-1587.117) (-1576.719) (-1587.004) * [-1574.680] (-1569.475) (-1569.050) (-1582.624) -- 0:01:20
853000 -- (-1567.118) [-1565.430] (-1590.416) (-1589.175) * (-1571.636) (-1589.602) [-1555.395] (-1572.639) -- 0:01:19
854000 -- (-1594.729) [-1583.465] (-1577.677) (-1576.835) * (-1588.263) (-1574.875) [-1572.010] (-1579.660) -- 0:01:19
855000 -- (-1571.739) [-1572.320] (-1589.004) (-1591.799) * (-1591.035) (-1588.511) [-1569.108] (-1575.477) -- 0:01:18
Average standard deviation of split frequencies: 0.006746
856000 -- [-1565.997] (-1581.677) (-1581.200) (-1593.440) * (-1574.846) (-1575.095) [-1567.347] (-1581.431) -- 0:01:18
857000 -- [-1570.194] (-1577.545) (-1568.537) (-1578.439) * [-1577.607] (-1585.645) (-1578.775) (-1576.746) -- 0:01:17
858000 -- (-1579.927) (-1584.294) [-1564.528] (-1568.213) * (-1571.269) [-1566.820] (-1582.027) (-1576.000) -- 0:01:17
859000 -- (-1591.064) (-1572.847) (-1614.460) [-1571.940] * (-1578.792) [-1570.913] (-1572.809) (-1576.547) -- 0:01:16
860000 -- [-1565.403] (-1567.087) (-1582.920) (-1578.444) * (-1565.132) (-1577.322) (-1588.645) [-1571.249] -- 0:01:16
Average standard deviation of split frequencies: 0.006436
861000 -- (-1583.178) [-1575.710] (-1586.649) (-1572.939) * (-1576.802) (-1562.825) (-1582.837) [-1567.857] -- 0:01:15
862000 -- (-1575.026) (-1579.943) [-1565.183] (-1572.873) * (-1570.158) [-1567.883] (-1587.567) (-1582.008) -- 0:01:15
863000 -- [-1562.545] (-1590.415) (-1577.294) (-1581.663) * [-1580.979] (-1568.183) (-1600.573) (-1590.551) -- 0:01:14
864000 -- [-1567.431] (-1571.888) (-1588.011) (-1590.468) * [-1581.070] (-1568.954) (-1588.438) (-1580.596) -- 0:01:13
865000 -- [-1577.409] (-1577.813) (-1589.597) (-1576.803) * (-1576.297) (-1579.642) [-1568.562] (-1593.344) -- 0:01:13
Average standard deviation of split frequencies: 0.006620
866000 -- (-1573.249) [-1572.597] (-1581.517) (-1587.281) * [-1561.670] (-1568.412) (-1595.025) (-1579.203) -- 0:01:12
867000 -- [-1569.124] (-1570.875) (-1570.630) (-1591.762) * [-1571.068] (-1570.420) (-1577.445) (-1568.538) -- 0:01:12
868000 -- [-1569.989] (-1568.565) (-1606.306) (-1580.779) * [-1572.800] (-1576.794) (-1584.657) (-1580.041) -- 0:01:11
869000 -- (-1574.083) [-1573.140] (-1575.562) (-1586.562) * [-1558.803] (-1597.940) (-1586.688) (-1597.671) -- 0:01:11
870000 -- (-1575.733) (-1562.109) (-1594.023) [-1588.175] * [-1580.524] (-1596.557) (-1578.322) (-1575.242) -- 0:01:10
Average standard deviation of split frequencies: 0.006797
871000 -- [-1569.350] (-1566.679) (-1596.424) (-1584.702) * (-1580.479) (-1583.037) [-1590.058] (-1567.286) -- 0:01:10
872000 -- (-1577.743) [-1566.992] (-1576.893) (-1598.537) * (-1570.988) (-1588.094) (-1592.540) [-1569.402] -- 0:01:09
873000 -- [-1572.179] (-1576.390) (-1569.013) (-1585.084) * [-1566.235] (-1574.549) (-1587.052) (-1590.407) -- 0:01:09
874000 -- (-1597.552) (-1580.615) [-1573.461] (-1577.197) * (-1566.594) (-1573.057) (-1582.507) [-1571.375] -- 0:01:08
875000 -- (-1582.425) (-1570.723) [-1573.270] (-1584.774) * (-1568.964) [-1572.248] (-1573.716) (-1575.784) -- 0:01:08
Average standard deviation of split frequencies: 0.006659
876000 -- [-1560.772] (-1570.666) (-1588.670) (-1586.388) * (-1574.570) (-1574.757) [-1573.317] (-1603.303) -- 0:01:07
877000 -- (-1569.747) (-1559.495) [-1566.218] (-1592.551) * [-1568.671] (-1578.004) (-1564.049) (-1600.750) -- 0:01:06
878000 -- (-1574.561) (-1576.688) [-1575.570] (-1580.856) * (-1571.806) (-1588.094) [-1563.078] (-1587.244) -- 0:01:06
879000 -- (-1569.087) (-1591.115) [-1573.045] (-1595.564) * [-1568.779] (-1583.460) (-1570.529) (-1591.756) -- 0:01:05
880000 -- [-1569.245] (-1587.694) (-1573.395) (-1573.143) * [-1566.858] (-1574.081) (-1586.434) (-1583.752) -- 0:01:05
Average standard deviation of split frequencies: 0.006538
881000 -- (-1579.601) [-1567.114] (-1588.968) (-1582.432) * (-1588.333) (-1564.558) [-1567.309] (-1602.910) -- 0:01:04
882000 -- (-1577.978) [-1577.604] (-1567.702) (-1588.644) * (-1604.906) (-1580.921) [-1571.155] (-1573.086) -- 0:01:04
883000 -- [-1573.424] (-1591.020) (-1564.546) (-1593.146) * (-1580.715) (-1583.348) [-1567.408] (-1580.700) -- 0:01:03
884000 -- (-1565.550) (-1589.256) (-1583.580) [-1575.950] * (-1582.846) (-1577.994) [-1572.115] (-1580.035) -- 0:01:03
885000 -- (-1596.900) (-1574.572) [-1571.809] (-1585.806) * [-1570.286] (-1573.161) (-1567.914) (-1585.168) -- 0:01:02
Average standard deviation of split frequencies: 0.006366
886000 -- (-1573.269) (-1594.679) [-1572.007] (-1595.982) * (-1580.835) (-1568.781) [-1562.223] (-1598.444) -- 0:01:02
887000 -- (-1564.486) (-1587.598) [-1573.222] (-1605.683) * [-1566.454] (-1579.601) (-1569.797) (-1582.753) -- 0:01:01
888000 -- [-1570.409] (-1576.315) (-1583.199) (-1573.220) * [-1569.316] (-1591.610) (-1581.399) (-1570.663) -- 0:01:01
889000 -- (-1586.880) [-1567.965] (-1574.971) (-1572.201) * (-1569.116) (-1593.836) [-1569.158] (-1583.818) -- 0:01:00
890000 -- (-1581.492) (-1579.523) (-1596.383) [-1570.413] * [-1564.973] (-1583.124) (-1585.936) (-1583.357) -- 0:00:59
Average standard deviation of split frequencies: 0.006597
891000 -- (-1580.888) [-1572.108] (-1586.528) (-1566.995) * [-1572.580] (-1565.093) (-1605.768) (-1600.715) -- 0:00:59
892000 -- [-1564.159] (-1578.022) (-1586.118) (-1581.949) * (-1585.575) [-1561.700] (-1579.528) (-1581.807) -- 0:00:58
893000 -- (-1567.492) [-1584.566] (-1597.976) (-1589.263) * [-1566.891] (-1569.229) (-1584.942) (-1592.912) -- 0:00:58
894000 -- (-1582.127) (-1568.424) (-1597.744) [-1581.924] * [-1566.128] (-1579.328) (-1600.035) (-1574.715) -- 0:00:57
895000 -- (-1570.758) (-1575.693) (-1577.371) [-1568.626] * (-1590.453) [-1572.161] (-1586.564) (-1575.063) -- 0:00:57
Average standard deviation of split frequencies: 0.006539
896000 -- (-1575.772) (-1573.679) (-1575.405) [-1578.161] * (-1566.059) (-1588.590) [-1578.228] (-1585.245) -- 0:00:56
897000 -- (-1565.415) (-1609.371) [-1576.147] (-1576.141) * [-1575.667] (-1569.707) (-1594.047) (-1588.576) -- 0:00:56
898000 -- [-1585.823] (-1588.829) (-1580.359) (-1587.070) * (-1578.117) (-1574.298) (-1588.281) [-1567.977] -- 0:00:55
899000 -- (-1575.303) [-1575.709] (-1590.118) (-1584.117) * [-1561.761] (-1567.077) (-1582.338) (-1580.909) -- 0:00:54
900000 -- (-1566.354) (-1597.554) (-1570.874) [-1577.981] * [-1570.357] (-1574.208) (-1585.741) (-1575.604) -- 0:00:54
Average standard deviation of split frequencies: 0.006604
901000 -- (-1585.666) (-1586.097) (-1575.957) [-1565.264] * (-1579.989) [-1567.849] (-1567.462) (-1581.054) -- 0:00:53
902000 -- [-1567.697] (-1588.305) (-1577.061) (-1563.966) * (-1581.972) [-1567.319] (-1570.058) (-1565.959) -- 0:00:53
903000 -- [-1581.768] (-1579.434) (-1565.280) (-1579.427) * (-1570.866) (-1589.518) (-1572.132) [-1570.730] -- 0:00:52
904000 -- (-1597.542) (-1574.133) [-1567.058] (-1583.064) * (-1586.477) [-1566.529] (-1590.938) (-1585.636) -- 0:00:52
905000 -- [-1581.319] (-1582.527) (-1582.095) (-1580.446) * (-1577.851) [-1570.462] (-1595.854) (-1574.480) -- 0:00:51
Average standard deviation of split frequencies: 0.006632
906000 -- [-1570.347] (-1580.636) (-1585.880) (-1579.025) * [-1562.525] (-1599.971) (-1580.013) (-1578.201) -- 0:00:51
907000 -- (-1587.400) [-1566.519] (-1577.511) (-1569.808) * (-1583.011) (-1571.675) (-1574.394) [-1582.329] -- 0:00:50
908000 -- (-1586.027) (-1579.963) [-1574.717] (-1577.824) * (-1571.424) (-1589.244) [-1564.833] (-1578.109) -- 0:00:50
909000 -- (-1594.736) (-1580.748) (-1580.092) [-1568.679] * (-1591.546) (-1587.507) [-1576.588] (-1572.884) -- 0:00:49
910000 -- (-1595.627) [-1561.620] (-1582.068) (-1569.134) * [-1576.626] (-1587.792) (-1582.006) (-1574.021) -- 0:00:48
Average standard deviation of split frequencies: 0.006936
911000 -- (-1601.808) (-1576.352) (-1578.168) [-1577.591] * (-1572.338) (-1581.632) (-1577.264) [-1576.583] -- 0:00:48
912000 -- (-1582.504) [-1567.928] (-1585.137) (-1570.931) * (-1598.267) [-1575.622] (-1577.603) (-1583.057) -- 0:00:47
913000 -- (-1585.264) [-1568.638] (-1595.575) (-1576.667) * [-1574.907] (-1572.187) (-1592.624) (-1575.112) -- 0:00:47
914000 -- [-1574.055] (-1576.489) (-1571.410) (-1582.301) * [-1573.162] (-1577.688) (-1588.519) (-1573.982) -- 0:00:46
915000 -- (-1581.887) (-1575.504) (-1571.868) [-1570.697] * (-1577.725) [-1574.917] (-1588.678) (-1579.295) -- 0:00:46
Average standard deviation of split frequencies: 0.007113
916000 -- [-1568.556] (-1578.029) (-1592.433) (-1573.123) * (-1577.268) (-1581.723) (-1597.620) [-1578.135] -- 0:00:45
917000 -- (-1575.155) [-1572.855] (-1596.825) (-1575.544) * [-1568.168] (-1585.532) (-1594.046) (-1595.219) -- 0:00:45
918000 -- [-1562.332] (-1569.143) (-1592.163) (-1592.689) * (-1566.826) [-1570.573] (-1584.504) (-1584.127) -- 0:00:44
919000 -- (-1580.872) (-1575.943) [-1571.599] (-1592.348) * (-1580.959) [-1571.151] (-1564.766) (-1589.258) -- 0:00:44
920000 -- (-1589.235) [-1574.766] (-1572.264) (-1590.091) * (-1585.540) [-1571.450] (-1582.605) (-1610.062) -- 0:00:43
Average standard deviation of split frequencies: 0.007384
921000 -- [-1561.253] (-1578.753) (-1572.821) (-1571.320) * [-1578.106] (-1565.559) (-1585.372) (-1589.912) -- 0:00:42
922000 -- (-1577.352) (-1569.718) [-1568.510] (-1588.763) * (-1580.236) (-1572.298) (-1577.630) [-1576.281] -- 0:00:42
923000 -- (-1585.379) (-1592.721) [-1574.135] (-1570.091) * (-1577.910) [-1564.591] (-1586.278) (-1574.878) -- 0:00:41
924000 -- (-1582.154) (-1581.395) (-1599.382) [-1570.908] * (-1566.740) (-1574.841) (-1581.022) [-1576.585] -- 0:00:41
925000 -- (-1564.760) (-1578.193) (-1591.746) [-1562.884] * (-1577.233) (-1587.284) [-1564.403] (-1578.298) -- 0:00:40
Average standard deviation of split frequencies: 0.006954
926000 -- (-1588.979) [-1580.720] (-1579.844) (-1572.738) * (-1581.583) (-1577.560) [-1571.308] (-1577.327) -- 0:00:40
927000 -- (-1574.314) (-1573.529) (-1588.665) [-1563.847] * (-1583.693) (-1572.229) (-1572.431) [-1571.595] -- 0:00:39
928000 -- (-1583.528) [-1574.572] (-1580.434) (-1578.288) * (-1578.219) (-1581.721) [-1561.135] (-1575.465) -- 0:00:39
929000 -- (-1578.914) [-1582.707] (-1594.190) (-1590.287) * (-1592.640) (-1589.111) [-1566.688] (-1564.792) -- 0:00:38
930000 -- (-1586.043) (-1569.483) (-1602.696) [-1577.663] * (-1584.501) [-1573.321] (-1580.365) (-1568.358) -- 0:00:38
Average standard deviation of split frequencies: 0.006983
931000 -- [-1576.967] (-1573.021) (-1602.140) (-1587.256) * [-1574.868] (-1574.663) (-1571.964) (-1601.631) -- 0:00:37
932000 -- [-1575.832] (-1578.408) (-1596.005) (-1595.628) * (-1581.104) (-1581.263) (-1564.466) [-1575.024] -- 0:00:36
933000 -- (-1589.189) [-1582.083] (-1581.236) (-1584.369) * (-1580.201) [-1585.938] (-1582.095) (-1575.528) -- 0:00:36
934000 -- (-1585.264) (-1586.585) (-1576.528) [-1564.561] * (-1580.298) [-1574.470] (-1578.503) (-1573.514) -- 0:00:35
935000 -- [-1571.340] (-1570.032) (-1584.559) (-1577.619) * (-1581.403) (-1592.670) [-1567.061] (-1575.046) -- 0:00:35
Average standard deviation of split frequencies: 0.007014
936000 -- [-1561.034] (-1575.041) (-1571.742) (-1582.492) * [-1567.841] (-1567.645) (-1567.634) (-1585.867) -- 0:00:34
937000 -- (-1601.253) (-1584.468) [-1567.042] (-1575.318) * [-1573.818] (-1592.451) (-1571.795) (-1585.543) -- 0:00:34
938000 -- (-1602.083) (-1578.311) (-1562.957) [-1578.040] * (-1560.915) (-1578.326) [-1563.329] (-1575.579) -- 0:00:33
939000 -- [-1565.053] (-1590.537) (-1563.041) (-1587.776) * (-1569.959) (-1578.947) [-1568.261] (-1598.505) -- 0:00:33
940000 -- (-1581.644) (-1593.235) [-1565.668] (-1590.143) * (-1571.601) [-1569.001] (-1570.553) (-1593.391) -- 0:00:32
Average standard deviation of split frequencies: 0.006923
941000 -- (-1578.125) (-1573.150) (-1575.091) [-1572.348] * (-1569.076) (-1575.331) [-1573.623] (-1576.069) -- 0:00:32
942000 -- (-1568.877) (-1569.465) [-1572.126] (-1581.567) * (-1573.051) (-1580.191) [-1571.184] (-1575.588) -- 0:00:31
943000 -- (-1575.842) (-1567.735) (-1569.128) [-1572.370] * [-1574.964] (-1569.343) (-1574.029) (-1584.239) -- 0:00:31
944000 -- (-1581.906) [-1560.058] (-1569.986) (-1581.353) * (-1574.417) (-1592.816) (-1581.825) [-1573.262] -- 0:00:30
945000 -- (-1586.248) (-1579.338) [-1569.980] (-1569.667) * (-1569.330) (-1598.259) [-1565.411] (-1585.668) -- 0:00:29
Average standard deviation of split frequencies: 0.006843
946000 -- (-1574.785) (-1595.450) (-1581.129) [-1572.201] * (-1574.595) (-1582.794) [-1566.475] (-1575.145) -- 0:00:29
947000 -- (-1584.961) (-1576.452) (-1571.673) [-1573.563] * (-1579.505) [-1571.319] (-1576.986) (-1593.573) -- 0:00:28
948000 -- (-1591.027) [-1581.341] (-1569.120) (-1575.510) * (-1585.715) (-1563.710) [-1578.125] (-1591.718) -- 0:00:28
949000 -- [-1571.992] (-1570.034) (-1581.951) (-1585.705) * (-1571.569) [-1581.324] (-1563.632) (-1578.520) -- 0:00:27
950000 -- (-1564.754) [-1565.353] (-1586.398) (-1579.491) * (-1590.377) (-1582.292) (-1588.432) [-1565.049] -- 0:00:27
Average standard deviation of split frequencies: 0.006809
951000 -- (-1579.361) (-1574.113) (-1574.421) [-1578.194] * (-1581.961) (-1581.209) [-1574.999] (-1569.124) -- 0:00:26
952000 -- (-1575.647) [-1566.592] (-1596.504) (-1567.355) * (-1584.541) (-1566.236) [-1581.756] (-1572.098) -- 0:00:26
953000 -- (-1586.962) [-1567.707] (-1579.971) (-1566.989) * (-1581.330) (-1590.613) (-1593.620) [-1561.531] -- 0:00:25
954000 -- (-1591.334) [-1576.947] (-1580.285) (-1582.181) * (-1579.922) (-1576.122) (-1566.047) [-1569.411] -- 0:00:25
955000 -- (-1586.537) (-1596.111) [-1561.373] (-1564.634) * (-1575.540) (-1568.821) [-1561.972] (-1589.110) -- 0:00:24
Average standard deviation of split frequencies: 0.006357
956000 -- (-1573.635) [-1579.321] (-1581.549) (-1586.495) * (-1573.750) (-1577.566) [-1570.232] (-1578.348) -- 0:00:23
957000 -- (-1587.196) (-1583.212) (-1573.659) [-1580.362] * (-1574.291) [-1570.874] (-1577.545) (-1568.075) -- 0:00:23
958000 -- (-1578.309) (-1567.654) [-1572.704] (-1585.436) * (-1577.892) (-1574.864) (-1582.451) [-1560.531] -- 0:00:22
959000 -- (-1580.698) (-1571.411) (-1579.735) [-1572.213] * (-1576.544) (-1575.430) [-1571.609] (-1592.333) -- 0:00:22
960000 -- (-1601.819) (-1583.137) [-1572.220] (-1566.184) * (-1576.419) (-1588.003) [-1564.133] (-1572.768) -- 0:00:21
Average standard deviation of split frequencies: 0.006479
961000 -- (-1586.321) (-1566.839) [-1567.898] (-1570.838) * [-1576.580] (-1609.115) (-1566.074) (-1574.819) -- 0:00:21
962000 -- (-1577.180) [-1568.701] (-1587.601) (-1571.135) * (-1575.107) (-1590.436) [-1570.869] (-1579.128) -- 0:00:20
963000 -- (-1588.557) (-1581.319) (-1573.619) [-1567.620] * (-1574.304) (-1592.183) (-1560.111) [-1570.013] -- 0:00:20
964000 -- (-1580.623) (-1575.666) [-1565.416] (-1579.775) * [-1564.962] (-1589.914) (-1582.392) (-1572.271) -- 0:00:19
965000 -- (-1583.613) (-1582.246) [-1578.892] (-1576.389) * (-1583.752) (-1571.105) [-1567.755] (-1586.220) -- 0:00:19
Average standard deviation of split frequencies: 0.006761
966000 -- (-1575.320) (-1571.333) [-1576.596] (-1580.099) * (-1580.876) [-1570.861] (-1564.531) (-1574.529) -- 0:00:18
967000 -- (-1578.699) (-1582.139) (-1567.070) [-1565.097] * (-1573.028) [-1567.124] (-1560.381) (-1581.301) -- 0:00:17
968000 -- (-1567.015) [-1577.959] (-1571.965) (-1588.976) * (-1577.779) [-1570.304] (-1573.314) (-1571.683) -- 0:00:17
969000 -- (-1575.676) (-1599.872) [-1573.316] (-1594.637) * (-1582.200) [-1563.863] (-1575.367) (-1579.163) -- 0:00:16
970000 -- [-1565.004] (-1594.875) (-1576.626) (-1595.084) * (-1570.927) (-1587.734) [-1571.524] (-1572.997) -- 0:00:16
Average standard deviation of split frequencies: 0.006745
971000 -- (-1573.391) (-1586.200) [-1569.621] (-1588.084) * (-1575.970) (-1588.297) [-1567.292] (-1574.813) -- 0:00:15
972000 -- [-1571.810] (-1589.394) (-1578.277) (-1573.451) * (-1581.057) (-1577.391) [-1568.379] (-1578.093) -- 0:00:15
973000 -- [-1566.571] (-1574.373) (-1580.000) (-1584.255) * [-1568.058] (-1586.059) (-1579.654) (-1577.302) -- 0:00:14
974000 -- (-1587.751) (-1576.472) [-1573.826] (-1568.696) * [-1564.668] (-1582.155) (-1580.886) (-1572.860) -- 0:00:14
975000 -- (-1585.890) [-1568.777] (-1598.398) (-1570.044) * (-1564.756) [-1571.292] (-1571.107) (-1573.561) -- 0:00:13
Average standard deviation of split frequencies: 0.006613
976000 -- (-1590.150) (-1577.013) (-1579.141) [-1574.275] * (-1572.675) (-1593.006) (-1576.485) [-1567.752] -- 0:00:13
977000 -- (-1572.331) (-1594.044) (-1578.106) [-1580.049] * (-1570.240) [-1572.370] (-1589.398) (-1566.539) -- 0:00:12
978000 -- [-1573.937] (-1580.483) (-1590.707) (-1574.538) * (-1588.072) [-1583.720] (-1583.745) (-1569.923) -- 0:00:11
979000 -- (-1581.673) (-1598.613) [-1568.650] (-1584.243) * (-1573.895) (-1586.396) [-1571.583] (-1588.052) -- 0:00:11
980000 -- (-1574.769) (-1590.234) [-1564.527] (-1580.497) * (-1564.946) (-1577.076) (-1575.286) [-1569.276] -- 0:00:10
Average standard deviation of split frequencies: 0.006685
981000 -- (-1586.933) (-1567.719) (-1573.802) [-1581.109] * (-1569.483) (-1566.015) [-1585.116] (-1593.481) -- 0:00:10
982000 -- (-1582.564) (-1585.161) (-1565.658) [-1567.171] * [-1570.790] (-1577.249) (-1580.047) (-1577.968) -- 0:00:09
983000 -- [-1571.160] (-1569.480) (-1572.477) (-1585.450) * [-1564.898] (-1563.626) (-1579.920) (-1583.487) -- 0:00:09
984000 -- (-1584.092) (-1595.701) [-1561.392] (-1580.149) * (-1574.238) (-1582.895) [-1565.767] (-1584.316) -- 0:00:08
985000 -- (-1568.558) (-1602.884) [-1566.628] (-1573.714) * (-1583.747) [-1570.120] (-1587.869) (-1580.369) -- 0:00:08
Average standard deviation of split frequencies: 0.006658
986000 -- [-1565.309] (-1576.692) (-1575.229) (-1566.796) * [-1572.716] (-1579.901) (-1601.954) (-1577.636) -- 0:00:07
987000 -- (-1585.646) [-1576.264] (-1562.805) (-1584.693) * (-1580.243) [-1571.311] (-1590.199) (-1565.188) -- 0:00:07
988000 -- [-1568.981] (-1577.756) (-1578.427) (-1580.077) * (-1588.239) [-1568.530] (-1593.649) (-1573.375) -- 0:00:06
989000 -- (-1586.632) [-1569.590] (-1587.249) (-1587.635) * (-1591.568) (-1586.269) (-1570.581) [-1574.834] -- 0:00:05
990000 -- [-1569.236] (-1567.678) (-1576.696) (-1570.518) * (-1580.387) (-1575.036) (-1583.649) [-1567.298] -- 0:00:05
Average standard deviation of split frequencies: 0.006705
991000 -- (-1579.320) (-1584.329) [-1572.659] (-1586.819) * (-1603.938) (-1588.894) [-1568.696] (-1566.696) -- 0:00:04
992000 -- [-1570.196] (-1585.917) (-1569.487) (-1583.820) * (-1571.317) [-1570.254] (-1579.133) (-1580.709) -- 0:00:04
993000 -- (-1571.360) (-1579.796) [-1580.489] (-1612.839) * (-1579.237) (-1580.916) [-1570.436] (-1582.500) -- 0:00:03
994000 -- [-1579.108] (-1586.199) (-1572.392) (-1584.898) * [-1572.264] (-1565.584) (-1583.806) (-1578.538) -- 0:00:03
995000 -- (-1579.414) [-1577.133] (-1600.545) (-1588.933) * (-1589.694) [-1573.956] (-1583.280) (-1578.212) -- 0:00:02
Average standard deviation of split frequencies: 0.006573
996000 -- (-1565.326) [-1572.820] (-1585.298) (-1585.546) * [-1570.939] (-1566.617) (-1613.203) (-1571.540) -- 0:00:02
997000 -- [-1570.789] (-1574.019) (-1577.509) (-1576.735) * [-1573.713] (-1568.404) (-1586.988) (-1579.913) -- 0:00:01
998000 -- (-1563.262) (-1575.844) (-1586.370) [-1581.677] * [-1575.896] (-1572.980) (-1604.529) (-1581.394) -- 0:00:01
999000 -- (-1579.487) [-1571.693] (-1571.029) (-1571.508) * [-1564.895] (-1572.785) (-1577.317) (-1593.270) -- 0:00:00
1000000 -- (-1576.627) (-1582.799) [-1580.448] (-1598.079) * [-1569.640] (-1583.874) (-1560.661) (-1592.831) -- 0:00:00
Average standard deviation of split frequencies: 0.006382
Analysis completed in 9 mins 5 seconds
Analysis used 543.49 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -1551.66
Likelihood of best state for "cold" chain of run 2 was -1552.36
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
63.4 % ( 57 %) Dirichlet(Revmat{all})
78.6 % ( 78 %) Slider(Revmat{all})
26.4 % ( 32 %) Dirichlet(Pi{all})
28.4 % ( 23 %) Slider(Pi{all})
73.7 % ( 48 %) Multiplier(Alpha{1,2})
63.1 % ( 36 %) Multiplier(Alpha{3})
54.3 % ( 35 %) Slider(Pinvar{all})
40.5 % ( 34 %) ExtSPR(Tau{all},V{all})
34.1 % ( 30 %) ExtTBR(Tau{all},V{all})
48.8 % ( 51 %) NNI(Tau{all},V{all})
26.2 % ( 31 %) ParsSPR(Tau{all},V{all})
27.5 % ( 29 %) Multiplier(V{all})
68.4 % ( 67 %) Nodeslider(V{all})
26.6 % ( 28 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
62.7 % ( 64 %) Dirichlet(Revmat{all})
78.7 % ( 68 %) Slider(Revmat{all})
26.2 % ( 23 %) Dirichlet(Pi{all})
28.3 % ( 26 %) Slider(Pi{all})
74.2 % ( 53 %) Multiplier(Alpha{1,2})
62.3 % ( 40 %) Multiplier(Alpha{3})
54.2 % ( 22 %) Slider(Pinvar{all})
40.4 % ( 43 %) ExtSPR(Tau{all},V{all})
34.4 % ( 39 %) ExtTBR(Tau{all},V{all})
48.9 % ( 44 %) NNI(Tau{all},V{all})
26.2 % ( 43 %) ParsSPR(Tau{all},V{all})
27.4 % ( 18 %) Multiplier(V{all})
68.5 % ( 72 %) Nodeslider(V{all})
26.3 % ( 34 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.38 0.09 0.01
2 | 166624 0.40 0.10
3 | 166293 166427 0.41
4 | 166759 166943 166954
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.38 0.09 0.01
2 | 166301 0.41 0.10
3 | 166032 167182 0.43
4 | 165969 166819 167697
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -1567.05
| 1 |
| 1 1 1 1 |
|22 1 2 |
| * 2 2 12 2 211 2 1 2 2 1 |
| 2 1 221 211 1 22 1 1 21 2 2 2 |
| 2 * 2 * * 1 2 1 * 1 2211 22 1 2 12 21 2|
|1 21 * 1 2 21 2 2 2 2 222 1 1 * |
| 1 1 221 1 2 1 2 1 1 11 2 1|
| 1 1 1 22 1 1 1 2 21 |
| 1 1 |
| 2 |
| 1 |
| |
| |
| 2 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -1577.08
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1562.43 -1583.22
2 -1560.67 -1585.81
--------------------------------------
TOTAL -1561.21 -1585.19
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.081968 0.000288 0.050991 0.115880 0.080521 1254.98 1266.50 1.000
r(A<->C){all} 0.044003 0.000985 0.000118 0.104838 0.037015 453.83 483.51 1.000
r(A<->G){all} 0.216314 0.003716 0.105845 0.337906 0.212531 491.21 512.36 1.003
r(A<->T){all} 0.040485 0.000459 0.007798 0.085121 0.037011 558.39 661.13 1.000
r(C<->G){all} 0.055545 0.001574 0.000179 0.132064 0.046973 515.48 556.20 1.000
r(C<->T){all} 0.511383 0.006477 0.361200 0.663445 0.510013 526.58 541.90 1.003
r(G<->T){all} 0.132270 0.001928 0.051680 0.216773 0.127196 589.08 620.63 1.001
pi(A){all} 0.279546 0.000221 0.251625 0.309025 0.279353 1168.32 1270.70 1.000
pi(C){all} 0.140072 0.000127 0.118575 0.163144 0.139836 992.11 1196.68 1.000
pi(G){all} 0.225110 0.000183 0.199241 0.251011 0.224672 1224.54 1228.25 1.000
pi(T){all} 0.355272 0.000234 0.324683 0.384299 0.355153 1106.84 1174.64 1.000
alpha{1,2} 0.122639 0.031404 0.000016 0.338551 0.084037 1009.99 1011.89 1.000
alpha{3} 2.412144 1.915873 0.305567 5.199070 2.138361 1246.78 1257.22 1.001
pinvar{all} 0.772129 0.004821 0.637494 0.874974 0.782733 418.22 693.68 1.002
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C243
2 -- C34
3 -- C78
4 -- C156
5 -- C234
6 -- C267
7 -- C46
8 -- C19
9 -- C22
10 -- C60
11 -- C273
12 -- C29
13 -- C202
14 -- C197
15 -- C65
16 -- C98
17 -- C88
18 -- C132
19 -- C5
20 -- C122
21 -- C121
22 -- C69
23 -- C130
24 -- C71
25 -- C76
26 -- C135
27 -- C134
28 -- C70
29 -- C21
30 -- C49
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------------------------
1 -- .*****************************
2 -- .*............................
3 -- ..*...........................
4 -- ...*..........................
5 -- ....*.........................
6 -- .....*........................
7 -- ......*.......................
8 -- .......*......................
9 -- ........*.....................
10 -- .........*....................
11 -- ..........*...................
12 -- ...........*..................
13 -- ............*.................
14 -- .............*................
15 -- ..............*...............
16 -- ...............*..............
17 -- ................*.............
18 -- .................*............
19 -- ..................*...........
20 -- ...................*..........
21 -- ....................*.........
22 -- .....................*........
23 -- ......................*.......
24 -- .......................*......
25 -- ........................*.....
26 -- .........................*....
27 -- ..........................*...
28 -- ...........................*..
29 -- ............................*.
30 -- .............................*
31 -- .....................*.*......
32 -- .***..****.******.*.........**
33 -- .....................*.*...*..
34 -- .****.****.******.*..*.**..***
35 -- .***..*.**.*..***.*..........*
36 -- ..*......*....................
37 -- .......*....................*.
38 -- .****.***********.*..*.**..***
39 -- ...................**.........
40 -- ..**.....*.....**.*...........
41 -- .****************.*..*.**..***
42 -- .................*....*...*...
43 -- .***..****.******.*..*.**..***
44 -- .....................*.**..*..
45 -- .***..*.**.******.*..........*
46 -- .................*....*.......
47 -- ......................*...*...
48 -- .................*........*...
49 -- .***..*.**.**.***.*..........*
50 -- .***..*.**.*.****.*..........*
51 -- ............**................
52 -- .................*....*..**...
53 -- .******************..*********
54 -- .******************..****.****
55 -- .************************.****
56 -- ...................**....*....
57 -- .................*.**.*..**...
58 -- .****************.*..*.***.***
59 -- .................*.**.*...*...
60 -- .****************.****.**..***
61 -- .****************.****.***.***
62 -- ...............*..*...........
63 -- ...............**.............
64 -- .***..****.******.*..*.*...***
65 -- ..*......*........*...........
66 -- .***..****.******.*.....*...**
67 -- ..**.....*....................
68 -- ....*................*.**..*..
69 -- ..*......*.....**.*...........
70 -- ................*.*...........
71 -- ..*......*......*.............
72 -- ..**.....*.....*..*...........
73 -- ...*...........*..............
74 -- ..**.....*.....**.............
75 -- ...*...........**.*...........
76 -- ..**.....*......*.*...........
77 -- ...*............*.............
78 -- ..*......*.....*..............
79 -- ...*..............*...........
80 -- ......*....*..................
81 -- .......*....**..............*.
82 -- .***.....*.....**.*...........
83 -- ......*.......*...............
------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 3002 1.000000 0.000000 1.000000 1.000000 2
33 3002 1.000000 0.000000 1.000000 1.000000 2
34 3000 0.999334 0.000942 0.998668 1.000000 2
35 3000 0.999334 0.000000 0.999334 0.999334 2
36 2985 0.994337 0.000471 0.994004 0.994670 2
37 2957 0.985010 0.006124 0.980680 0.989340 2
38 2955 0.984344 0.005182 0.980680 0.988008 2
39 2951 0.983011 0.008951 0.976682 0.989340 2
40 2865 0.954364 0.010835 0.946702 0.962025 2
41 2844 0.947368 0.002827 0.945370 0.949367 2
42 2765 0.921053 0.002355 0.919387 0.922718 2
43 2439 0.812458 0.002355 0.810793 0.814124 2
44 2099 0.699201 0.005182 0.695536 0.702865 2
45 1962 0.653564 0.019786 0.639574 0.667555 2
46 992 0.330446 0.005653 0.326449 0.334444 2
47 984 0.327781 0.012248 0.319121 0.336442 2
48 953 0.317455 0.017430 0.305130 0.329780 2
49 827 0.275483 0.008951 0.269154 0.281812 2
50 809 0.269487 0.000471 0.269154 0.269820 2
51 807 0.268821 0.011777 0.260493 0.277149 2
52 608 0.202532 0.014133 0.192538 0.212525 2
53 605 0.201532 0.001413 0.200533 0.202532 2
54 603 0.200866 0.006124 0.196536 0.205197 2
55 590 0.196536 0.000942 0.195869 0.197202 2
56 589 0.196203 0.000471 0.195869 0.196536 2
57 574 0.191206 0.007537 0.185876 0.196536 2
58 572 0.190540 0.005653 0.186542 0.194537 2
59 569 0.189540 0.005182 0.185876 0.193205 2
60 553 0.184211 0.010835 0.176549 0.191872 2
61 538 0.179214 0.001884 0.177881 0.180546 2
62 452 0.150566 0.014133 0.140573 0.160560 2
63 450 0.149900 0.008480 0.143904 0.155896 2
64 449 0.149567 0.004240 0.146569 0.152565 2
65 446 0.148568 0.004711 0.145237 0.151899 2
66 444 0.147901 0.000000 0.147901 0.147901 2
67 443 0.147568 0.004240 0.144570 0.150566 2
68 442 0.147235 0.000000 0.147235 0.147235 2
69 437 0.145570 0.009893 0.138574 0.152565 2
70 431 0.143571 0.007066 0.138574 0.148568 2
71 430 0.143238 0.007537 0.137908 0.148568 2
72 427 0.142239 0.007066 0.137242 0.147235 2
73 425 0.141572 0.002355 0.139907 0.143238 2
74 419 0.139574 0.008951 0.133245 0.145903 2
75 415 0.138241 0.004240 0.135243 0.141239 2
76 413 0.137575 0.008951 0.131246 0.143904 2
77 412 0.137242 0.016017 0.125916 0.148568 2
78 404 0.134577 0.015075 0.123917 0.145237 2
79 380 0.126582 0.003769 0.123917 0.129247 2
80 307 0.102265 0.003298 0.099933 0.104597 2
81 294 0.097935 0.018844 0.084610 0.111259 2
82 293 0.097602 0.004240 0.094604 0.100600 2
83 288 0.095936 0.009422 0.089274 0.102598 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.000729 0.000001 0.000000 0.002184 0.000491 1.000 2
length{all}[2] 0.000782 0.000001 0.000000 0.002464 0.000535 1.000 2
length{all}[3] 0.000745 0.000001 0.000000 0.002257 0.000508 1.000 2
length{all}[4] 0.000785 0.000001 0.000000 0.002405 0.000530 1.000 2
length{all}[5] 0.000770 0.000001 0.000000 0.002354 0.000505 1.000 2
length{all}[6] 0.000763 0.000001 0.000000 0.002285 0.000516 1.000 2
length{all}[7] 0.000761 0.000001 0.000000 0.002301 0.000501 1.000 2
length{all}[8] 0.001512 0.000001 0.000001 0.003795 0.001218 1.000 2
length{all}[9] 0.000767 0.000001 0.000000 0.002381 0.000512 1.000 2
length{all}[10] 0.000774 0.000001 0.000000 0.002466 0.000510 1.000 2
length{all}[11] 0.002309 0.000002 0.000098 0.004960 0.002034 1.000 2
length{all}[12] 0.000773 0.000001 0.000001 0.002294 0.000535 1.000 2
length{all}[13] 0.000762 0.000001 0.000000 0.002236 0.000534 1.000 2
length{all}[14] 0.000752 0.000001 0.000001 0.002313 0.000506 1.000 2
length{all}[15] 0.001490 0.000001 0.000031 0.003669 0.001206 1.000 2
length{all}[16] 0.000764 0.000001 0.000001 0.002338 0.000522 1.000 2
length{all}[17] 0.001498 0.000001 0.000052 0.003672 0.001235 1.000 2
length{all}[18] 0.000744 0.000001 0.000000 0.002255 0.000513 1.000 2
length{all}[19] 0.000760 0.000001 0.000000 0.002306 0.000531 1.000 2
length{all}[20] 0.000755 0.000001 0.000001 0.002359 0.000510 1.000 2
length{all}[21] 0.000741 0.000001 0.000000 0.002290 0.000502 1.000 2
length{all}[22] 0.000731 0.000001 0.000000 0.002222 0.000492 1.000 2
length{all}[23] 0.000738 0.000001 0.000000 0.002264 0.000518 1.000 2
length{all}[24] 0.000752 0.000001 0.000000 0.002304 0.000516 1.000 2
length{all}[25] 0.000814 0.000001 0.000000 0.002464 0.000543 1.000 2
length{all}[26] 0.001480 0.000001 0.000030 0.003641 0.001216 1.000 2
length{all}[27] 0.000731 0.000001 0.000001 0.002210 0.000499 1.000 2
length{all}[28] 0.001536 0.000001 0.000000 0.003888 0.001242 1.000 2
length{all}[29] 0.000746 0.000001 0.000000 0.002360 0.000500 1.000 2
length{all}[30] 0.001519 0.000001 0.000022 0.003698 0.001228 1.001 2
length{all}[31] 0.006006 0.000006 0.001831 0.010811 0.005605 1.000 2
length{all}[32] 0.011583 0.000017 0.004669 0.019781 0.011015 1.000 2
length{all}[33] 0.004593 0.000004 0.001064 0.008826 0.004211 1.000 2
length{all}[34] 0.002934 0.000003 0.000406 0.006300 0.002631 1.000 2
length{all}[35] 0.002280 0.000002 0.000231 0.005096 0.001977 1.000 2
length{all}[36] 0.001489 0.000001 0.000013 0.003526 0.001242 1.000 2
length{all}[37] 0.003126 0.000003 0.000258 0.006779 0.002794 1.000 2
length{all}[38] 0.001542 0.000001 0.000013 0.003835 0.001256 1.000 2
length{all}[39] 0.001525 0.000001 0.000050 0.003896 0.001250 1.000 2
length{all}[40] 0.001534 0.000001 0.000014 0.003792 0.001264 1.000 2
length{all}[41] 0.001498 0.000001 0.000004 0.003570 0.001243 1.000 2
length{all}[42] 0.001468 0.000001 0.000046 0.003671 0.001214 1.000 2
length{all}[43] 0.001814 0.000002 0.000072 0.004310 0.001529 1.000 2
length{all}[44] 0.001578 0.000002 0.000000 0.003941 0.001246 1.000 2
length{all}[45] 0.001892 0.000002 0.000006 0.004769 0.001520 1.000 2
length{all}[46] 0.000737 0.000001 0.000001 0.002224 0.000495 0.999 2
length{all}[47] 0.000801 0.000001 0.000001 0.002502 0.000505 0.999 2
length{all}[48] 0.000752 0.000001 0.000001 0.002260 0.000497 0.999 2
length{all}[49] 0.000769 0.000001 0.000002 0.002223 0.000541 1.003 2
length{all}[50] 0.000807 0.000001 0.000002 0.002476 0.000510 1.000 2
length{all}[51] 0.000786 0.000001 0.000001 0.002440 0.000552 1.000 2
length{all}[52] 0.000795 0.000001 0.000002 0.002375 0.000564 1.001 2
length{all}[53] 0.000784 0.000001 0.000001 0.002254 0.000530 0.999 2
length{all}[54] 0.000814 0.000001 0.000003 0.002410 0.000571 1.002 2
length{all}[55] 0.000712 0.000001 0.000002 0.002132 0.000478 0.999 2
length{all}[56] 0.000763 0.000001 0.000001 0.002384 0.000530 0.999 2
length{all}[57] 0.000846 0.000001 0.000001 0.002565 0.000560 1.001 2
length{all}[58] 0.000797 0.000001 0.000001 0.002392 0.000533 1.000 2
length{all}[59] 0.000762 0.000001 0.000002 0.002413 0.000528 0.998 2
length{all}[60] 0.000738 0.000001 0.000000 0.002268 0.000473 1.000 2
length{all}[61] 0.000726 0.000001 0.000000 0.002128 0.000522 1.008 2
length{all}[62] 0.000764 0.000001 0.000001 0.002198 0.000509 1.002 2
length{all}[63] 0.000761 0.000001 0.000000 0.002430 0.000525 1.012 2
length{all}[64] 0.000816 0.000001 0.000004 0.002375 0.000580 1.002 2
length{all}[65] 0.000744 0.000001 0.000000 0.002314 0.000504 1.005 2
length{all}[66] 0.000769 0.000001 0.000001 0.002330 0.000548 0.999 2
length{all}[67] 0.000801 0.000001 0.000002 0.002344 0.000565 0.998 2
length{all}[68] 0.001374 0.000001 0.000005 0.003506 0.001093 0.999 2
length{all}[69] 0.000827 0.000001 0.000002 0.002493 0.000613 1.003 2
length{all}[70] 0.000825 0.000001 0.000006 0.002407 0.000568 0.999 2
length{all}[71] 0.000786 0.000001 0.000002 0.002242 0.000546 0.998 2
length{all}[72] 0.000790 0.000001 0.000000 0.002790 0.000512 0.998 2
length{all}[73] 0.000771 0.000001 0.000005 0.002249 0.000551 1.001 2
length{all}[74] 0.000749 0.000001 0.000001 0.002254 0.000549 0.998 2
length{all}[75] 0.000824 0.000001 0.000001 0.002438 0.000549 1.000 2
length{all}[76] 0.000794 0.000001 0.000000 0.002269 0.000485 0.998 2
length{all}[77] 0.000705 0.000001 0.000002 0.002226 0.000436 0.999 2
length{all}[78] 0.000784 0.000001 0.000006 0.002266 0.000550 0.998 2
length{all}[79] 0.000721 0.000001 0.000000 0.002187 0.000507 1.001 2
length{all}[80] 0.000742 0.000001 0.000000 0.002305 0.000473 1.010 2
length{all}[81] 0.000810 0.000001 0.000011 0.002478 0.000538 1.002 2
length{all}[82] 0.000774 0.000001 0.000002 0.002559 0.000488 0.997 2
length{all}[83] 0.000724 0.000001 0.000002 0.002079 0.000497 0.999 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.006382
Maximum standard deviation of split frequencies = 0.019786
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.012
Clade credibility values:
/--------------------------------------------------------------------- C243 (1)
|
|--------------------------------------------------------------------- C135 (26)
|
| /------- C122 (20)
|------------------------------98-----------------------------+
| \------- C121 (21)
|
| /--------------------- C34 (2)
| |
| | /------- C78 (3)
| | /--99--+
| | | \------- C60 (10)
| | |
| | |-------------- C156 (4)
| | |
| |--95--+-------------- C98 (16)
| | |
| | |-------------- C88 (17)
| /--100-+ |
| | | \-------------- C5 (19)
| | |
| | |--------------------- C46 (7)
| | |
| | |--------------------- C22 (9)
| | |
| | |--------------------- C29 (12)
| /--65-+ |
+ | | |--------------------- C65 (15)
| | | |
| | | \--------------------- C49 (30)
| | |
| /--100-+ |---------------------------- C202 (13)
| | | |
| | | \---------------------------- C197 (14)
| | |
| | | /------- C19 (8)
| | \------------99------------+
| | \------- C21 (29)
| /--81--+
| | | /------- C69 (22)
| | | /--100-+
| | | | \------- C71 (24)
| | | /--100-+
| /--100-+ | | \-------------- C70 (28)
| | | \---------70--------+
| | | \--------------------- C76 (25)
| /--98--+ |
| | | \------------------------------------------------ C234 (5)
| | |
|--95--+ \------------------------------------------------------- C273 (11)
| |
| \-------------------------------------------------------------- C267 (6)
|
| /------- C132 (18)
| |
\------------------------------92-----------------------------+------- C130 (23)
|
\------- C134 (27)
Phylogram (based on average branch lengths):
/- C243 (1)
|
|---- C135 (26)
|
| /- C122 (20)
|---+
| \- C121 (21)
|
| /-- C34 (2)
| |
| | /- C78 (3)
| | /---+
| | | \- C60 (10)
| | |
| | |- C156 (4)
| | |
| |---+- C98 (16)
| | |
| | |---- C88 (17)
| /----+ |
| | | \- C5 (19)
| | |
| | |-- C46 (7)
| | |
| | |-- C22 (9)
| | |
| | |-- C29 (12)
| /----+ |
+ | | |---- C65 (15)
| | | |
| | | \---- C49 (30)
| | |
| /-------------------------------+ |- C202 (13)
| | | |
| | | \- C197 (14)
| | |
| | | /---- C19 (8)
| | \-------+
| | \-- C21 (29)
| /---+
| | | /-- C69 (22)
| | | /---------------+
| | | | \-- C71 (24)
| | | /-----------+
| /-------+ | | \---- C70 (28)
| | | \---+
| | | \- C76 (25)
| /--+ |
| | | \- C234 (5)
| | |
|---+ \------ C273 (11)
| |
| \- C267 (6)
|
| /- C132 (18)
| |
\---+- C130 (23)
|
\- C134 (27)
|-------------| 0.005 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Fri Nov 18 14:40:01 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp13_VIPR_ALG4_QEY10630_1_20585_21481_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result--
-- Starting log on Sat Nov 19 10:16:54 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp13_VIPR_ALG4_QEY10630_1_20585_21481_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result/original_alignment/codeml,DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp13_VIPR_ALG4_QEY10630_1_20585_21481_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C197 897 sites
reading seq# 2 C98 897 sites
reading seq# 3 C65 897 sites
reading seq# 4 C273 897 sites
reading seq# 5 C132 897 sites
reading seq# 6 C88 897 sites
reading seq# 7 C5 897 sites
reading seq# 8 C202 897 sites
reading seq# 9 C70 897 sites
reading seq#10 C122 897 sites
reading seq#11 C34 897 sites
reading seq#12 C243 897 sites
reading seq#13 C78 897 sites
reading seq#14 C121 897 sites
reading seq#15 C69 897 sites
reading seq#16 C234 897 sites
reading seq#17 C156 897 sites
reading seq#18 C267 897 sites
reading seq#19 C71 897 sites
reading seq#20 C130 897 sites
reading seq#21 C19 897 sites
reading seq#22 C46 897 sites
reading seq#23 C135 897 sites
reading seq#24 C134 897 sites
reading seq#25 C76 897 sites
reading seq#26 C60 897 sites
reading seq#27 C22 897 sites
reading seq#28 C49 897 sites
reading seq#29 C21 897 sites
reading seq#30 C29 897 sitesns = 30 ls = 897
Reading sequences, sequential format..
Reading seq # 1: C197
Reading seq # 2: C98
Reading seq # 3: C65
Reading seq # 4: C273
Reading seq # 5: C132
Reading seq # 6: C88
Reading seq # 7: C5
Reading seq # 8: C202
Reading seq # 9: C70
Reading seq #10: C122
Reading seq #11: C34
Reading seq #12: C243
Reading seq #13: C78
Reading seq #14: C121
Reading seq #15: C69
Reading seq #16: C234
Reading seq #17: C156
Reading seq #18: C267
Reading seq #19: C71
Reading seq #20: C130
Reading seq #21: C19
Reading seq #22: C46
Reading seq #23: C135
Reading seq #24: C134
Reading seq #25: C76
Reading seq #26: C60
Reading seq #27: C22
Reading seq #28: C49
Reading seq #29: C21
Reading seq #30: C29
Sequences read..
Counting site patterns.. 0:00
Compressing, 91 patterns at 299 / 299 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 91 patterns at 299 / 299 sites (100.0%), 0:00
Counting codons..
3480 bytes for distance
88816 bytes for conP
8008 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(12, 23, (10, 14), (((((((11, ((13, 26), 17, 2, 6, 7), 22, 27, 30, 3, 28), 8, 1), (21, 29)), (((15, 19), 9), 25)), 16), 4), 18), (5, 20, 24)); MP score: 49
710528 bytes for conP, adjusted
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
37
0.074075 0.031823 0.025861 0.082596 0.026555 0.049103 0.100176 0.064619 0.071127 0.070785 0.073330 0.069154 0.089980 0.052526 0.011986 0.080576 0.057387 0.050096 0.066168 0.079604 0.093819 0.024893 0.041304 0.059889 0.097710 0.039982 0.103370 0.106237 0.084529 0.032595 0.034329 0.057880 0.037878 0.024043 0.030046 0.055251 0.052284 0.102955 0.107881 0.043685 0.022373 0.092806 0.066126 0.082498 0.108128 0.300000 0.818621 0.112464
ntime & nrate & np: 45 2 48
Bounds (np=48):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 18.433993
np = 48
lnL0 = -1978.798584
Iterating by ming2
Initial: fx= 1978.798584
x= 0.07408 0.03182 0.02586 0.08260 0.02656 0.04910 0.10018 0.06462 0.07113 0.07079 0.07333 0.06915 0.08998 0.05253 0.01199 0.08058 0.05739 0.05010 0.06617 0.07960 0.09382 0.02489 0.04130 0.05989 0.09771 0.03998 0.10337 0.10624 0.08453 0.03260 0.03433 0.05788 0.03788 0.02404 0.03005 0.05525 0.05228 0.10295 0.10788 0.04369 0.02237 0.09281 0.06613 0.08250 0.10813 0.30000 0.81862 0.11246
1 h-m-p 0.0000 0.0001 1553.2549 ++ 1762.049397 m 0.0001 53 | 0/48
2 h-m-p 0.0000 0.0000 2665.6494 ++ 1751.262522 m 0.0000 104 | 1/48
3 h-m-p 0.0000 0.0000 2883.0131 ++ 1747.390682 m 0.0000 155 | 1/48
4 h-m-p 0.0000 0.0000 830.7483
h-m-p: 3.54810002e-20 1.77405001e-19 8.30748288e+02 1747.390682
.. | 1/48
5 h-m-p 0.0000 0.0000 6888.9494 CYCCC 1741.325203 4 0.0000 262 | 1/48
6 h-m-p 0.0000 0.0000 688.1832 ++ 1736.396469 m 0.0000 313 | 2/48
7 h-m-p 0.0000 0.0000 78120.3002 ++ 1730.140541 m 0.0000 364 | 3/48
8 h-m-p 0.0000 0.0000 41804.9375 ++ 1717.678732 m 0.0000 415 | 4/48
9 h-m-p 0.0000 0.0000 3365.4508 ++ 1703.208028 m 0.0000 466 | 5/48
10 h-m-p 0.0000 0.0000 2271.2414 ++ 1683.242169 m 0.0000 517 | 6/48
11 h-m-p 0.0000 0.0000 1501.9345 ++ 1659.358594 m 0.0000 568 | 7/48
12 h-m-p 0.0000 0.0000 281036.3696 ++ 1642.051101 m 0.0000 619 | 8/48
13 h-m-p 0.0000 0.0000 2861.9164 ++ 1640.094509 m 0.0000 670 | 9/48
14 h-m-p 0.0000 0.0000 928.3742 ++ 1633.998759 m 0.0000 721 | 10/48
15 h-m-p 0.0000 0.0000 2641.7405 ++ 1619.000760 m 0.0000 772 | 11/48
16 h-m-p 0.0000 0.0000 57601.0743 ++ 1617.503362 m 0.0000 823 | 12/48
17 h-m-p 0.0000 0.0000 11672.0949 ++ 1603.129549 m 0.0000 874 | 13/48
18 h-m-p 0.0000 0.0000 5081.8980 ++ 1587.115622 m 0.0000 925 | 14/48
19 h-m-p 0.0000 0.0000 1222.5529 ++ 1587.045710 m 0.0000 976 | 15/48
20 h-m-p 0.0000 0.0000 1864.9468 ++ 1579.026501 m 0.0000 1027 | 16/48
21 h-m-p 0.0000 0.0000 1649.8265 ++ 1576.115274 m 0.0000 1078 | 17/48
22 h-m-p 0.0000 0.0000 911.6677 ++ 1575.330141 m 0.0000 1129 | 18/48
23 h-m-p 0.0000 0.0000 5033.0955 ++ 1567.872237 m 0.0000 1180 | 19/48
24 h-m-p 0.0000 0.0000 795.3921 ++ 1566.546316 m 0.0000 1231 | 20/48
25 h-m-p 0.0000 0.0000 1580.5334 ++ 1565.471441 m 0.0000 1282 | 21/48
26 h-m-p 0.0000 0.0000 1983.6881 ++ 1564.525155 m 0.0000 1333 | 22/48
27 h-m-p 0.0000 0.0000 687.4662 ++ 1564.240368 m 0.0000 1384 | 23/48
28 h-m-p 0.0000 0.0001 201.0137 +CYCCC 1561.138257 4 0.0001 1444 | 23/48
29 h-m-p 0.0000 0.0000 930.4151 +YYCCC 1558.970775 4 0.0000 1502 | 23/48
30 h-m-p 0.0000 0.0000 1225.1610 YCCCC 1558.129225 4 0.0000 1560 | 23/48
31 h-m-p 0.0000 0.0000 351.2777 +YCYCCC 1557.183317 5 0.0000 1620 | 23/48
32 h-m-p 0.0000 0.0002 199.6116 YCCCC 1555.667080 4 0.0001 1678 | 23/48
33 h-m-p 0.0000 0.0001 1079.4940 +YYYYCC 1549.767765 5 0.0001 1736 | 23/48
34 h-m-p 0.0000 0.0000 2421.1357 +YCYCCC 1549.153720 5 0.0000 1796 | 23/48
35 h-m-p 0.0000 0.0001 1111.8650 +YYCCC 1546.698010 4 0.0000 1854 | 23/48
36 h-m-p 0.0000 0.0000 1873.0447 +YCYYYCC 1539.246753 6 0.0000 1914 | 23/48
37 h-m-p 0.0000 0.0001 1205.8495 +YYCYCCC 1532.647832 6 0.0001 1975 | 23/48
38 h-m-p 0.0000 0.0001 913.2389 +YYYYCYCCCC 1524.656766 9 0.0001 2040 | 23/48
39 h-m-p 0.0000 0.0001 454.5538 +YYYYCC 1522.061819 5 0.0001 2098 | 23/48
40 h-m-p 0.0010 0.0159 35.5811 +YYCC 1519.641382 3 0.0036 2154 | 23/48
41 h-m-p 0.0073 0.0364 16.6616 CYCCC 1517.870231 4 0.0053 2212 | 23/48
42 h-m-p 0.0035 0.0176 6.6082 +YCYCCC 1513.305709 5 0.0103 2272 | 23/48
43 h-m-p 0.0020 0.0101 5.9668 +YYYCYCYC 1508.551650 7 0.0087 2333 | 23/48
44 h-m-p 0.0013 0.0067 18.2695 +YYCYYCC 1501.660316 6 0.0060 2394 | 23/48
45 h-m-p 0.0029 0.0146 11.2046 +YYYCCCCC 1494.855946 7 0.0120 2457 | 23/48
46 h-m-p 0.0087 0.0433 1.1665 YCCCC 1494.176580 4 0.0186 2515 | 23/48
47 h-m-p 0.0116 0.0975 1.8657 +YCYCCC 1492.241642 5 0.0636 2576 | 23/48
48 h-m-p 0.0323 0.1617 1.5763 +YYYC 1487.333180 3 0.1255 2631 | 23/48
49 h-m-p 0.0195 0.0973 0.2178 +YCYCCC 1486.225920 5 0.0575 2691 | 23/48
50 h-m-p 0.0301 0.2063 0.4165 +YYYYYCCCC 1485.234133 8 0.1229 2779 | 23/48
51 h-m-p 0.0140 0.0700 2.2282 YCYCCC 1484.363195 5 0.0364 2863 | 23/48
52 h-m-p 0.1162 0.5808 0.6339 +YCCCC 1482.360647 4 0.3445 2922 | 23/48
53 h-m-p 0.0565 0.2823 0.6680 YCCCC 1481.638088 4 0.1423 3005 | 23/48
54 h-m-p 0.1008 0.5370 0.9433 YCCC 1480.355688 3 0.2467 3086 | 23/48
55 h-m-p 0.2571 1.2853 0.3115 YCCC 1479.643991 3 0.5867 3167 | 23/48
56 h-m-p 0.4487 2.2434 0.3430 CCCC 1478.895127 3 0.7689 3249 | 23/48
57 h-m-p 0.7575 3.7876 0.3021 CCCC 1478.168857 3 1.0717 3331 | 23/48
58 h-m-p 1.1292 5.6461 0.2298 CCC 1477.714478 2 1.4290 3411 | 23/48
59 h-m-p 1.0780 5.3898 0.2450 CCCC 1477.274942 3 1.5784 3493 | 23/48
60 h-m-p 1.0583 5.2915 0.1825 CCCC 1476.892889 3 1.5327 3575 | 23/48
61 h-m-p 0.6997 3.4985 0.0794 CCCC 1476.649300 3 1.1577 3657 | 23/48
62 h-m-p 1.2710 8.0000 0.0723 CC 1476.537012 1 1.7412 3735 | 23/48
63 h-m-p 1.5344 7.6721 0.0472 CCCC 1476.454019 3 1.7465 3817 | 23/48
64 h-m-p 1.6000 8.0000 0.0484 YC 1476.374199 1 2.7106 3894 | 23/48
65 h-m-p 1.6000 8.0000 0.0501 YCCC 1476.225974 3 3.7847 3975 | 23/48
66 h-m-p 1.6000 8.0000 0.1029 CCC 1476.099760 2 2.1664 4055 | 23/48
67 h-m-p 1.6000 8.0000 0.0009 YC 1475.996955 1 3.6873 4132 | 23/48
68 h-m-p 0.0495 8.0000 0.0666 +++YCC 1475.891727 2 2.2418 4214 | 23/48
69 h-m-p 1.6000 8.0000 0.0452 YCC 1475.794634 2 3.3119 4293 | 23/48
70 h-m-p 1.6000 8.0000 0.0054 YC 1475.682943 1 2.7926 4370 | 23/48
71 h-m-p 0.2884 8.0000 0.0522 ++YC 1475.600500 1 3.0483 4449 | 23/48
72 h-m-p 1.6000 8.0000 0.0273 YC 1475.505032 1 3.0033 4526 | 23/48
73 h-m-p 1.6000 8.0000 0.0399 YCCC 1475.336285 3 3.7593 4607 | 23/48
74 h-m-p 1.3209 8.0000 0.1136 YCCC 1475.110772 3 3.0370 4688 | 23/48
75 h-m-p 1.3439 6.7193 0.0108 CCCC 1474.910553 3 1.9408 4770 | 23/48
76 h-m-p 1.6000 8.0000 0.0108 CC 1474.872009 1 1.3583 4848 | 23/48
77 h-m-p 0.6772 8.0000 0.0216 +YC 1474.862748 1 1.8364 4926 | 23/48
78 h-m-p 1.6000 8.0000 0.0182 YC 1474.856312 1 3.3876 5003 | 23/48
79 h-m-p 1.6000 8.0000 0.0114 +YC 1474.840952 1 4.9167 5081 | 23/48
80 h-m-p 1.6000 8.0000 0.0145 CC 1474.829910 1 2.1047 5159 | 23/48
81 h-m-p 1.6000 8.0000 0.0144 C 1474.828525 0 1.5575 5235 | 23/48
82 h-m-p 1.6000 8.0000 0.0021 YC 1474.827527 1 3.2762 5312 | 23/48
83 h-m-p 1.5991 8.0000 0.0043 +YC 1474.825180 1 5.3514 5390 | 23/48
84 h-m-p 1.6000 8.0000 0.0036 +CC 1474.816475 1 6.6856 5469 | 23/48
85 h-m-p 1.6000 8.0000 0.0026 CC 1474.812228 1 2.0407 5547 | 23/48
86 h-m-p 1.3992 8.0000 0.0038 YC 1474.811275 1 2.4187 5624 | 23/48
87 h-m-p 1.6000 8.0000 0.0004 +C 1474.809345 0 6.6655 5701 | 23/48
88 h-m-p 0.5155 8.0000 0.0046 ++ 1474.797867 m 8.0000 5777 | 23/48
89 h-m-p 1.6000 8.0000 0.0036 +CC 1474.754383 1 5.6562 5856 | 23/48
90 h-m-p 1.6000 8.0000 0.0095 +YC 1474.646189 1 4.2390 5934 | 23/48
91 h-m-p 1.6000 8.0000 0.0127 CYC 1474.628843 2 1.4329 6013 | 23/48
92 h-m-p 1.6000 8.0000 0.0068 YC 1474.627892 1 1.0046 6090 | 23/48
93 h-m-p 1.6000 8.0000 0.0018 Y 1474.627798 0 1.1557 6166 | 23/48
94 h-m-p 1.6000 8.0000 0.0006 Y 1474.627791 0 1.2187 6242 | 23/48
95 h-m-p 1.6000 8.0000 0.0001 C 1474.627791 0 1.2855 6318 | 23/48
96 h-m-p 1.6000 8.0000 0.0000 C 1474.627791 0 1.9673 6394 | 23/48
97 h-m-p 1.6000 8.0000 0.0000 --C 1474.627791 0 0.0242 6472 | 23/48
98 h-m-p 0.0317 8.0000 0.0000 --------------.. | 23/48
99 h-m-p 0.0012 0.6236 0.0136 ----------- | 23/48
100 h-m-p 0.0012 0.6236 0.0136 -----------
Out..
lnL = -1474.627791
6731 lfun, 20193 eigenQcodon, 605790 P(t)
end of tree file.
Time used: 3:20
Model 2: PositiveSelection
TREE # 1
(12, 23, (10, 14), (((((((11, ((13, 26), 17, 2, 6, 7), 22, 27, 30, 3, 28), 8, 1), (21, 29)), (((15, 19), 9), 25)), 16), 4), 18), (5, 20, 24)); MP score: 49
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
37
0.082870 0.080899 0.031032 0.053827 0.072975 0.029870 0.031920 0.014241 0.063797 0.083658 0.098765 0.023858 0.064063 0.076736 0.107444 0.095336 0.067740 0.065372 0.106144 0.080386 0.012523 0.072763 0.079072 0.073452 0.082758 0.018057 0.081953 0.104744 0.105237 0.058950 0.035229 0.039820 0.061304 0.052545 0.035926 0.077893 0.013701 0.014157 0.024098 0.016059 0.021600 0.028760 0.014804 0.021632 0.092263 3.379858 1.147518 0.457760 0.179056 1.515146
ntime & nrate & np: 45 3 50
Bounds (np=50):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 4.315787
np = 50
lnL0 = -1898.754520
Iterating by ming2
Initial: fx= 1898.754520
x= 0.08287 0.08090 0.03103 0.05383 0.07297 0.02987 0.03192 0.01424 0.06380 0.08366 0.09877 0.02386 0.06406 0.07674 0.10744 0.09534 0.06774 0.06537 0.10614 0.08039 0.01252 0.07276 0.07907 0.07345 0.08276 0.01806 0.08195 0.10474 0.10524 0.05895 0.03523 0.03982 0.06130 0.05254 0.03593 0.07789 0.01370 0.01416 0.02410 0.01606 0.02160 0.02876 0.01480 0.02163 0.09226 3.37986 1.14752 0.45776 0.17906 1.51515
1 h-m-p 0.0000 0.0001 1061.0894 ++ 1811.508576 m 0.0001 105 | 1/50
2 h-m-p 0.0000 0.0000 1597.5027 ++ 1803.629841 m 0.0000 208 | 2/50
3 h-m-p 0.0000 0.0000 3309.2084 ++ 1801.970161 m 0.0000 310 | 3/50
4 h-m-p 0.0000 0.0000 3189.8573 ++ 1779.496598 m 0.0000 411 | 4/50
5 h-m-p 0.0000 0.0000 1291.3656 ++ 1779.261538 m 0.0000 511 | 5/50
6 h-m-p 0.0000 0.0000 1005.7058 ++ 1773.741561 m 0.0000 610 | 6/50
7 h-m-p 0.0000 0.0001 769.6215 ++ 1746.533648 m 0.0001 708 | 7/50
8 h-m-p 0.0000 0.0000 1734.8308 ++ 1741.254691 m 0.0000 805 | 8/50
9 h-m-p 0.0000 0.0000 7285.4207 ++ 1701.820081 m 0.0000 901 | 9/50
10 h-m-p 0.0000 0.0000 10083.2858 ++ 1671.669761 m 0.0000 996 | 10/50
11 h-m-p 0.0000 0.0000 5969.5261 ++ 1668.241167 m 0.0000 1090 | 11/50
12 h-m-p 0.0000 0.0000 2603.9336 ++ 1667.682152 m 0.0000 1183 | 12/50
13 h-m-p 0.0000 0.0000 1127.4874 ++ 1662.289538 m 0.0000 1275 | 13/50
14 h-m-p 0.0000 0.0000 86369.8556 ++ 1655.600977 m 0.0000 1366 | 14/50
15 h-m-p 0.0000 0.0000 1637.7553 ++ 1654.499032 m 0.0000 1456 | 15/50
16 h-m-p 0.0000 0.0000 58608.3832 ++ 1647.928944 m 0.0000 1545 | 16/50
17 h-m-p 0.0000 0.0000 3692.9991 ++ 1646.497352 m 0.0000 1633 | 17/50
18 h-m-p 0.0000 0.0000 9987.6801 ++ 1644.751309 m 0.0000 1720 | 18/50
19 h-m-p 0.0000 0.0000 3526.3043 ++ 1637.840214 m 0.0000 1806 | 19/50
20 h-m-p 0.0000 0.0000 3905.1519 ++ 1634.163883 m 0.0000 1891 | 19/50
21 h-m-p 0.0000 0.0000 2225.3230 ++ 1632.758699 m 0.0000 1975 | 20/50
22 h-m-p 0.0000 0.0000 1346.5668 ++ 1623.390628 m 0.0000 2059 | 21/50
23 h-m-p 0.0000 0.0000 2464.6709 ++ 1622.703080 m 0.0000 2142 | 22/50
24 h-m-p 0.0000 0.0001 1297.8044 ++ 1580.427342 m 0.0001 2224 | 22/50
25 h-m-p 0.0000 0.0000 2752.3094 ++ 1574.502418 m 0.0000 2305 | 22/50
26 h-m-p 0.0000 0.0000 534.4264
h-m-p: 1.30577255e-21 6.52886277e-21 5.34426395e+02 1574.502418
.. | 22/50
27 h-m-p 0.0000 0.0000 159984.6242 YYCCYCCC 1569.604477 7 0.0000 2476 | 22/50
28 h-m-p 0.0000 0.0000 1477.8884 ++ 1568.013204 m 0.0000 2557 | 23/50
29 h-m-p 0.0000 0.0001 667.6721 ++ 1545.920914 m 0.0001 2638 | 23/50
30 h-m-p 0.0000 0.0000 15637.0369 +YYYCCC 1544.352075 5 0.0000 2726 | 23/50
31 h-m-p 0.0000 0.0000 9815.4858 +YYCYYCCC 1523.093836 7 0.0000 2818 | 23/50
32 h-m-p 0.0000 0.0000 2596.5969 +YYCCC 1520.828364 4 0.0000 2905 | 23/50
33 h-m-p 0.0000 0.0000 1933.0119 YCYCCC 1519.669694 5 0.0000 2993 | 23/50
34 h-m-p 0.0000 0.0000 1369.6318 +YYCCCC 1518.014104 5 0.0000 3082 | 23/50
35 h-m-p 0.0000 0.0000 2869.6538 +YYCCCC 1517.041235 5 0.0000 3171 | 23/50
36 h-m-p 0.0000 0.0000 1199.9416 ++ 1513.960643 m 0.0000 3251 | 24/50
37 h-m-p 0.0000 0.0000 300.7162 CC 1513.945359 1 0.0000 3333 | 24/50
38 h-m-p 0.0000 0.0001 421.0471 --------.. | 24/50
39 h-m-p 0.0000 0.0001 386270.0097 ---CYCYYYCC 1510.398309 7 0.0000 3510 | 24/50
40 h-m-p 0.0000 0.0001 1128.0664 CYCCC 1508.486796 4 0.0000 3596 | 24/50
41 h-m-p 0.0000 0.0001 345.1590 +CCCC 1502.573475 3 0.0001 3682 | 24/50
42 h-m-p 0.0000 0.0000 2002.3980 +YYYCCC 1500.077353 5 0.0000 3769 | 24/50
43 h-m-p 0.0000 0.0000 447.4316 +YCYCCC 1499.375552 5 0.0000 3857 | 24/50
44 h-m-p 0.0000 0.0001 408.1758 YCYCCC 1497.963998 5 0.0000 3944 | 24/50
45 h-m-p 0.0000 0.0001 103.4872 CC 1497.866014 1 0.0000 4025 | 24/50
46 h-m-p 0.0000 0.0002 76.9358 YCC 1497.822857 2 0.0000 4107 | 24/50
47 h-m-p 0.0000 0.0003 88.0302 +YCCC 1497.677730 3 0.0001 4192 | 24/50
48 h-m-p 0.0001 0.0005 137.7269 YCC 1497.582811 2 0.0000 4274 | 24/50
49 h-m-p 0.0001 0.0010 45.9174 YC 1497.532572 1 0.0001 4354 | 24/50
50 h-m-p 0.0000 0.0004 134.4056 +YYCC 1497.384956 3 0.0001 4438 | 24/50
51 h-m-p 0.0000 0.0005 338.1279 +YYYCCCC 1496.811155 6 0.0002 4527 | 24/50
52 h-m-p 0.0000 0.0002 1172.6129 +YCYCCC 1495.237245 5 0.0001 4615 | 24/50
53 h-m-p 0.0000 0.0001 5332.7610 +YCCCC 1491.485310 4 0.0001 4702 | 24/50
54 h-m-p 0.0000 0.0001 7704.4454 ++ 1485.043820 m 0.0001 4781 | 25/50
55 h-m-p 0.0000 0.0001 2773.0814 +YYCCC 1482.712841 4 0.0001 4867 | 25/50
56 h-m-p 0.0000 0.0001 2614.7646 YCCCC 1481.445025 4 0.0001 4952 | 25/50
57 h-m-p 0.0000 0.0000 7064.2132 YCCC 1480.663105 3 0.0000 5035 | 25/50
58 h-m-p 0.0000 0.0001 1731.6872 CCCC 1480.221412 3 0.0000 5119 | 25/50
59 h-m-p 0.0001 0.0006 225.7034 YCC 1480.052453 2 0.0001 5200 | 25/50
60 h-m-p 0.0001 0.0006 24.6325 YC 1480.043669 1 0.0001 5279 | 24/50
61 h-m-p 0.0001 0.0041 12.1983 YC 1480.029580 1 0.0002 5358 | 24/50
62 h-m-p 0.0002 0.0020 9.1767 YC 1480.027978 1 0.0000 5438 | 24/50
63 h-m-p 0.0012 0.5760 0.4392 ++++YCYCCC 1476.902495 5 0.3466 5529 | 24/50
64 h-m-p 0.0848 0.4239 0.3757 YCYCCC 1476.202096 5 0.2091 5616 | 24/50
65 h-m-p 0.2639 1.6076 0.2977 YCCC 1475.612572 3 0.6224 5700 | 24/50
66 h-m-p 0.5045 3.2552 0.3674 CCC 1475.320921 2 0.4869 5783 | 24/50
67 h-m-p 0.5120 2.9099 0.3493 CCCC 1474.980427 3 0.8663 5868 | 24/50
68 h-m-p 0.5883 2.9413 0.1874 CCCC 1474.858712 3 0.6750 5953 | 24/50
69 h-m-p 0.8674 4.4569 0.1459 YYC 1474.769407 2 0.6626 6034 | 24/50
70 h-m-p 1.1593 7.7882 0.0834 YC 1474.718415 1 0.8327 6114 | 24/50
71 h-m-p 0.6106 6.4281 0.1137 CC 1474.683468 1 0.8988 6195 | 24/50
72 h-m-p 0.5844 5.9807 0.1748 C 1474.661095 0 0.5870 6274 | 24/50
73 h-m-p 1.3144 8.0000 0.0781 YC 1474.651569 1 1.0208 6354 | 24/50
74 h-m-p 1.6000 8.0000 0.0348 YC 1474.647603 1 1.0189 6434 | 24/50
75 h-m-p 1.6000 8.0000 0.0133 YC 1474.646999 1 0.8953 6514 | 23/50
76 h-m-p 1.0709 8.0000 0.0111 C 1474.646824 0 1.4895 6593 | 23/50
77 h-m-p 1.0598 8.0000 0.0156 YC 1474.646597 1 2.2070 6674 | 23/50
78 h-m-p 0.6573 8.0000 0.0525 +C 1474.645819 0 2.4737 6755 | 23/50
79 h-m-p 1.0807 8.0000 0.1202 YC 1474.644289 1 2.1159 6836 | 23/50
80 h-m-p 1.6000 8.0000 0.1046 CC 1474.643236 1 1.3711 6918 | 23/50
81 h-m-p 1.6000 8.0000 0.0245 YC 1474.643063 1 1.1901 6999 | 23/50
82 h-m-p 1.6000 8.0000 0.0032 C 1474.642995 0 2.1331 7079 | 23/50
83 h-m-p 1.6000 8.0000 0.0033 ++ 1474.642501 m 8.0000 7159 | 23/50
84 h-m-p 0.4107 8.0000 0.0642 +CC 1474.640961 1 2.6086 7242 | 23/50
85 h-m-p 1.1584 7.4699 0.1445 +YC 1474.633974 1 3.7574 7324 | 23/50
86 h-m-p 0.8785 4.3927 0.1433 YC 1474.627247 1 1.8109 7405 | 23/50
87 h-m-p 1.0112 8.0000 0.2566 YC 1474.626194 1 0.5511 7486 | 23/50
88 h-m-p 1.6000 8.0000 0.0150 YC 1474.625923 1 1.0276 7567 | 23/50
89 h-m-p 1.0520 8.0000 0.0147 C 1474.625893 0 1.1997 7647 | 23/50
90 h-m-p 1.6000 8.0000 0.0102 C 1474.625886 0 1.6000 7727 | 23/50
91 h-m-p 1.6000 8.0000 0.0026 C 1474.625886 0 1.3930 7807 | 23/50
92 h-m-p 1.6000 8.0000 0.0005 +Y 1474.625885 0 7.0058 7888 | 23/50
93 h-m-p 1.5328 8.0000 0.0022 ++ 1474.625878 m 8.0000 7968 | 23/50
94 h-m-p 0.2561 8.0000 0.0699 ++Y 1474.625842 0 2.6111 8050 | 23/50
95 h-m-p 1.4983 8.0000 0.1218 C 1474.625793 0 1.4983 8130 | 23/50
96 h-m-p 0.7695 8.0000 0.2371 C 1474.625726 0 0.7904 8210 | 23/50
97 h-m-p 1.6000 8.0000 0.0381 YC 1474.625699 1 0.9000 8291 | 23/50
98 h-m-p 0.1450 8.0000 0.2368 +C 1474.625667 0 0.7084 8372 | 23/50
99 h-m-p 0.7292 8.0000 0.2300 C 1474.625640 0 0.7292 8452 | 23/50
100 h-m-p 1.2355 8.0000 0.1358 Y 1474.625584 0 2.0561 8532 | 23/50
101 h-m-p 1.6000 8.0000 0.0747 Y 1474.625531 0 3.5620 8612 | 23/50
102 h-m-p 0.8492 8.0000 0.3133 Y 1474.625521 0 0.4003 8692 | 23/50
103 h-m-p 0.4959 8.0000 0.2529 Y 1474.625491 0 1.1256 8772 | 23/50
104 h-m-p 1.6000 8.0000 0.0828 Y 1474.625466 0 3.0286 8852 | 23/50
105 h-m-p 0.4855 8.0000 0.5167 C 1474.625451 0 0.4855 8932 | 23/50
106 h-m-p 0.9261 8.0000 0.2709 C 1474.625437 0 0.9261 9012 | 23/50
107 h-m-p 1.6000 8.0000 0.0564 C 1474.625427 0 2.3689 9092 | 23/50
108 h-m-p 0.2976 8.0000 0.4489 +Y 1474.625416 0 0.7922 9173 | 23/50
109 h-m-p 1.2146 8.0000 0.2928 C 1474.625409 0 1.2146 9253 | 23/50
110 h-m-p 1.6000 8.0000 0.1115 C 1474.625404 0 1.4972 9333 | 23/50
111 h-m-p 0.4346 8.0000 0.3842 +Y 1474.625397 0 1.3625 9414 | 23/50
112 h-m-p 1.6000 8.0000 0.2843 Y 1474.625392 0 2.6323 9494 | 23/50
113 h-m-p 1.6000 8.0000 0.1098 C 1474.625390 0 1.6000 9574 | 23/50
114 h-m-p 0.3382 8.0000 0.5196 +Y 1474.625388 0 0.8912 9655 | 23/50
115 h-m-p 1.3840 8.0000 0.3346 Y 1474.625387 0 3.4301 9735 | 23/50
116 h-m-p 1.6000 8.0000 0.1674 C 1474.625386 0 1.4765 9815 | 23/50
117 h-m-p 0.6143 8.0000 0.4022 +C 1474.625386 0 2.1646 9896 | 23/50
118 h-m-p 1.6000 8.0000 0.3465 Y 1474.625386 0 2.9252 9976 | 23/50
119 h-m-p 1.6000 8.0000 0.3371 C 1474.625386 0 1.8158 10056 | 23/50
120 h-m-p 1.6000 8.0000 0.3085 +Y 1474.625386 0 4.0337 10137 | 23/50
121 h-m-p 1.6000 8.0000 0.2932 C 1474.625386 0 1.3037 10217 | 23/50
122 h-m-p 0.5261 8.0000 0.7265 Y 1474.625386 0 1.2214 10297 | 23/50
123 h-m-p 1.6000 8.0000 0.0582 C 1474.625386 0 2.0989 10377 | 23/50
124 h-m-p 0.4644 8.0000 0.2631 +Y 1474.625386 0 4.5547 10458 | 23/50
125 h-m-p 1.6000 8.0000 0.0060 Y 1474.625386 0 3.6746 10538 | 23/50
126 h-m-p 0.0658 8.0000 0.3327 ++Y 1474.625386 0 2.2709 10620 | 23/50
127 h-m-p 0.0155 1.7227 48.8091 C 1474.625386 0 0.0138 10700 | 23/50
128 h-m-p 0.3474 8.0000 1.9425 Y 1474.625386 0 0.2311 10780 | 23/50
129 h-m-p 1.6000 8.0000 0.0007 -C 1474.625386 0 0.1440 10861 | 23/50
130 h-m-p 0.0009 0.4498 52.2966 -----------.. | 23/50
131 h-m-p 0.0160 8.0000 0.0005 -------------
Out..
lnL = -1474.625386
11042 lfun, 44168 eigenQcodon, 1490670 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -1488.679655 S = -1455.479527 -45.632031
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 91 patterns 11:33
did 20 / 91 patterns 11:33
did 30 / 91 patterns 11:33
did 40 / 91 patterns 11:33
did 50 / 91 patterns 11:33
did 60 / 91 patterns 11:33
did 70 / 91 patterns 11:33
did 80 / 91 patterns 11:33
did 90 / 91 patterns 11:33
did 91 / 91 patterns 11:33end of tree file.
Time used: 11:33
Model 7: beta
TREE # 1
(12, 23, (10, 14), (((((((11, ((13, 26), 17, 2, 6, 7), 22, 27, 30, 3, 28), 8, 1), (21, 29)), (((15, 19), 9), 25)), 16), 4), 18), (5, 20, 24)); MP score: 49
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
37
0.054738 0.052138 0.058559 0.020122 0.043010 0.052834 0.108840 0.103601 0.054406 0.011844 0.090784 0.087065 0.014261 0.107984 0.094591 0.015379 0.104099 0.025507 0.097388 0.022960 0.072790 0.051022 0.073552 0.098034 0.037836 0.023438 0.050634 0.071001 0.106483 0.022874 0.028080 0.050373 0.021346 0.059474 0.050929 0.104697 0.010229 0.098055 0.105683 0.063918 0.094837 0.029539 0.080532 0.088614 0.088062 3.377313 0.850972 1.971148
ntime & nrate & np: 45 1 48
Bounds (np=48):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 7.013789
np = 48
lnL0 = -2027.466038
Iterating by ming2
Initial: fx= 2027.466038
x= 0.05474 0.05214 0.05856 0.02012 0.04301 0.05283 0.10884 0.10360 0.05441 0.01184 0.09078 0.08707 0.01426 0.10798 0.09459 0.01538 0.10410 0.02551 0.09739 0.02296 0.07279 0.05102 0.07355 0.09803 0.03784 0.02344 0.05063 0.07100 0.10648 0.02287 0.02808 0.05037 0.02135 0.05947 0.05093 0.10470 0.01023 0.09806 0.10568 0.06392 0.09484 0.02954 0.08053 0.08861 0.08806 3.37731 0.85097 1.97115
1 h-m-p 0.0000 0.0001 1287.6615 ++ 1920.505387 m 0.0001 101 | 1/48
2 h-m-p 0.0000 0.0000 7284.6535 ++ 1912.742691 m 0.0000 200 | 2/48
3 h-m-p 0.0000 0.0000 1249122.3397 ++ 1882.199352 m 0.0000 298 | 3/48
4 h-m-p 0.0000 0.0000 25928.2052 ++ 1848.168170 m 0.0000 395 | 4/48
5 h-m-p 0.0000 0.0000 36251.3229 ++ 1826.823582 m 0.0000 491 | 5/48
6 h-m-p 0.0000 0.0000 5631.3852 ++ 1793.928573 m 0.0000 586 | 5/48
7 h-m-p 0.0000 0.0000 7173.1486 ++ 1743.627449 m 0.0000 680 | 6/48
8 h-m-p 0.0000 0.0000 4692.6524 ++ 1729.512835 m 0.0000 774 | 6/48
9 h-m-p 0.0000 0.0000 8189.0428 ++ 1714.274086 m 0.0000 867 | 6/48
10 h-m-p 0.0000 0.0000 10358.5921 ++ 1711.268889 m 0.0000 960 | 6/48
11 h-m-p -0.0000 -0.0000 204411.7674
h-m-p: -3.62699190e-25 -1.81349595e-24 2.04411767e+05 1711.268889
.. | 6/48
12 h-m-p 0.0000 0.0000 317082.5469 -CCYYCYYCCC 1705.469346 9 0.0000 1159 | 6/48
13 h-m-p 0.0000 0.0000 1725.0461 ++ 1695.044579 m 0.0000 1252 | 7/48
14 h-m-p 0.0000 0.0000 1894.0493 ++ 1692.453351 m 0.0000 1345 | 8/48
15 h-m-p 0.0000 0.0000 78144.2106 ++ 1685.430453 m 0.0000 1437 | 9/48
16 h-m-p 0.0000 0.0000 2638.0416 ++ 1674.884512 m 0.0000 1528 | 10/48
17 h-m-p 0.0000 0.0000 1144.3786 +YCYYCYCCC 1665.403593 8 0.0000 1631 | 10/48
18 h-m-p 0.0000 0.0000 1362.0552 ++ 1634.490055 m 0.0000 1720 | 10/48
19 h-m-p 0.0000 0.0000 2488.9685
h-m-p: 8.07870601e-22 4.03935300e-21 2.48896854e+03 1634.490055
.. | 10/48
20 h-m-p 0.0000 0.0000 3417.6251 +YCCCCC 1623.070675 5 0.0000 1905 | 10/48
21 h-m-p 0.0000 0.0000 1135.5040 ++ 1606.702846 m 0.0000 1994 | 11/48
22 h-m-p 0.0000 0.0000 148894.8005 ++ 1598.230491 m 0.0000 2083 | 12/48
23 h-m-p 0.0000 0.0000 197918.0673 ++ 1595.461947 m 0.0000 2171 | 13/48
24 h-m-p 0.0000 0.0000 13643.1357 ++ 1576.234774 m 0.0000 2258 | 14/48
25 h-m-p 0.0000 0.0000 6593.4436 +YCYYYCCCCC 1568.437586 9 0.0000 2359 | 14/48
26 h-m-p 0.0000 0.0000 20909.2843 ++ 1562.415603 m 0.0000 2444 | 14/48
27 h-m-p 0.0000 0.0000 14673.6603 ++ 1557.899027 m 0.0000 2529 | 15/48
28 h-m-p 0.0000 0.0000 168025.8344 ++ 1556.419841 m 0.0000 2614 | 16/48
29 h-m-p 0.0000 0.0000 3627.5877 +YYCYYCC 1550.318057 6 0.0000 2708 | 16/48
30 h-m-p 0.0000 0.0000 1581.5393 ++ 1538.810607 m 0.0000 2791 | 17/48
31 h-m-p 0.0000 0.0000 4030.9161 ++ 1535.376310 m 0.0000 2874 | 18/48
32 h-m-p 0.0000 0.0000 1447.6067 ++ 1534.251536 m 0.0000 2956 | 19/48
33 h-m-p 0.0000 0.0000 1544.8232 ++ 1530.758484 m 0.0000 3037 | 20/48
34 h-m-p 0.0000 0.0000 1214.9438 ++ 1528.260985 m 0.0000 3117 | 21/48
35 h-m-p 0.0000 0.0000 1112.7679 ++ 1526.157575 m 0.0000 3196 | 22/48
36 h-m-p 0.0000 0.0000 913.8744 +YYCCCC 1522.606882 5 0.0000 3283 | 22/48
37 h-m-p 0.0000 0.0000 258.7523 ++ 1521.144116 m 0.0000 3360 | 23/48
38 h-m-p 0.0000 0.0001 78.9501 +YYCC 1520.439765 3 0.0001 3442 | 23/48
39 h-m-p 0.0000 0.0001 262.7445 YCCCC 1520.051840 4 0.0000 3525 | 23/48
40 h-m-p 0.0000 0.0001 200.5412 CCC 1519.899532 2 0.0000 3605 | 23/48
41 h-m-p 0.0000 0.0004 126.9368 +YYC 1519.495790 2 0.0001 3684 | 23/48
42 h-m-p 0.0001 0.0004 112.7059 CYC 1519.293840 2 0.0001 3763 | 23/48
43 h-m-p 0.0001 0.0021 64.9742 +CCCCC 1518.447256 4 0.0007 3848 | 23/48
44 h-m-p 0.0001 0.0004 310.9111 +YYCCC 1516.717475 4 0.0002 3931 | 23/48
45 h-m-p 0.0001 0.0003 408.9728 YCCCC 1515.754158 4 0.0001 4014 | 23/48
46 h-m-p 0.0002 0.0010 190.9732 +YYYYCCC 1511.873591 6 0.0008 4099 | 23/48
47 h-m-p 0.0011 0.0053 91.6008 +
QuantileBeta(0.15, 0.00500, 2.19811) = 1.195403e-160 2000 rounds
YYYCCCC 1504.431412 6 0.0038 4185 | 23/48
48 h-m-p 0.0192 0.0961 5.9425 CYCCC 1502.671044 4 0.0307 4268 | 23/48
49 h-m-p 0.0087 0.0433 9.7675 YCCC 1501.521995 3 0.0191 4349 | 23/48
50 h-m-p 0.0266 0.1332 6.1742 +YCCCC 1499.371804 4 0.0729 4433 | 23/48
51 h-m-p 0.0026 0.0130 28.8353 YCCCC 1498.623038 4 0.0063 4516 | 23/48
52 h-m-p 0.0167 0.1344 10.9283 YCCC 1497.337138 3 0.0343 4597 | 23/48
53 h-m-p 0.1436 0.7179 0.2234 +YYYCCC 1494.549310 5 0.5102 4681 | 23/48
54 h-m-p 0.0612 0.3060 0.8984 YCCCC 1492.660944 4 0.1280 4764 | 23/48
55 h-m-p 0.1040 0.5200 0.3589 +YYCCC 1490.125708 4 0.3647 4847 | 23/48
56 h-m-p 0.1320 0.6598 0.6036 YCCC 1486.449073 3 0.3279 4928 | 23/48
57 h-m-p 0.1835 0.9175 0.5352 +YYYYCYCCC 1479.990235 8 0.7741 5016 | 23/48
58 h-m-p 0.0555 0.2776 0.3086 +YCYCCC 1479.424843 5 0.1579 5101 | 23/48
59 h-m-p 0.0499 0.5267 0.9763 +CYCCC 1477.601161 4 0.2866 5185 | 23/48
60 h-m-p 0.1706 0.8532 0.3063 +YCYCC 1476.535892 4 0.5164 5268 | 23/48
61 h-m-p 0.1499 0.7494 0.2611 YCCCC 1475.928003 4 0.3438 5351 | 23/48
62 h-m-p 0.4119 2.0594 0.0976 CCCC 1475.720210 3 0.4664 5433 | 23/48
63 h-m-p 0.2811 2.7655 0.1620 YC 1475.534695 1 0.5435 5510 | 23/48
64 h-m-p 0.7152 5.3543 0.1231 CCCC 1475.419819 3 1.0228 5592 | 23/48
65 h-m-p 1.0625 5.3123 0.0933 YC 1475.391336 1 0.5247 5669 | 23/48
66 h-m-p 0.4316 8.0000 0.1135 +CC 1475.350806 1 1.5941 5748 | 23/48
67 h-m-p 1.1327 8.0000 0.1597 CCC 1475.290289 2 1.7875 5828 | 23/48
68 h-m-p 0.8369 8.0000 0.3411 YC 1475.164717 1 1.8187 5905 | 23/48
69 h-m-p 1.0780 5.3898 0.3652 CCCC 1475.068430 3 1.3007 5987 | 23/48
70 h-m-p 1.1829 5.9147 0.3063 YCCC 1475.018730 3 0.6298 6068 | 23/48
71 h-m-p 1.5905 8.0000 0.1213 CCC 1474.939064 2 1.7925 6148 | 23/48
72 h-m-p 1.1994 7.5297 0.1812 YCCC 1474.872584 3 2.7039 6229 | 23/48
73 h-m-p 1.6000 8.0000 0.0691 CYC 1474.822165 2 2.1975 6308 | 23/48
74 h-m-p 0.7748 5.5218 0.1960 YYC 1474.784498 2 0.6279 6386 | 23/48
75 h-m-p 0.5225 3.7389 0.2356 +YC 1474.753947 1 1.3127 6464 | 23/48
76 h-m-p 1.6000 8.0000 0.1281 CCC 1474.745294 2 0.3687 6544 | 23/48
77 h-m-p 1.0844 8.0000 0.0435 CC 1474.735235 1 1.4907 6622 | 23/48
78 h-m-p 1.6000 8.0000 0.0316 CC 1474.730486 1 2.3373 6700 | 23/48
79 h-m-p 1.6000 8.0000 0.0042 +YC 1474.719590 1 5.0288 6778 | 23/48
80 h-m-p 0.6755 8.0000 0.0314 +YC 1474.694683 1 5.0479 6856 | 23/48
81 h-m-p 1.6000 8.0000 0.0215 YC 1474.666012 1 2.9785 6933 | 23/48
82 h-m-p 1.6000 8.0000 0.0051 CC 1474.659458 1 2.3069 7011 | 23/48
83 h-m-p 1.1825 8.0000 0.0100 YC 1474.655853 1 2.8262 7088 | 23/48
84 h-m-p 1.3911 8.0000 0.0203 +YC 1474.650697 1 4.1490 7166 | 23/48
85 h-m-p 1.6000 8.0000 0.0033 C 1474.649372 0 1.5147 7242 | 23/48
86 h-m-p 1.4555 8.0000 0.0035 CC 1474.649212 1 2.3021 7320 | 23/48
87 h-m-p 1.6000 8.0000 0.0027 +Y 1474.648822 0 6.7324 7397 | 23/48
88 h-m-p 1.6000 8.0000 0.0064 +CC 1474.647916 1 5.5653 7476 | 23/48
89 h-m-p 1.6000 8.0000 0.0047 C 1474.647627 0 1.6412 7552 | 23/48
90 h-m-p 1.6000 8.0000 0.0010 C 1474.647619 0 1.4549 7628 | 23/48
91 h-m-p 1.6000 8.0000 0.0002 C 1474.647618 0 1.9146 7704 | 23/48
92 h-m-p 1.6000 8.0000 0.0002 Y 1474.647618 0 1.1168 7780 | 23/48
93 h-m-p 1.6000 8.0000 0.0000 ++ 1474.647618 m 8.0000 7856 | 23/48
94 h-m-p 1.1603 8.0000 0.0001 +Y 1474.647618 0 3.4735 7933 | 23/48
95 h-m-p 1.6000 8.0000 0.0001 Y 1474.647618 0 1.0127 8009 | 23/48
96 h-m-p 1.6000 8.0000 0.0000 C 1474.647618 0 0.3254 8085 | 23/48
97 h-m-p 0.5178 8.0000 0.0000 -Y 1474.647618 0 0.0324 8162 | 23/48
98 h-m-p 0.0305 8.0000 0.0000 --Y 1474.647618 0 0.0005 8240
Out..
lnL = -1474.647618
8241 lfun, 90651 eigenQcodon, 3708450 P(t)
end of tree file.
Time used: 31:59
Model 8: beta&w>1
TREE # 1
(12, 23, (10, 14), (((((((11, ((13, 26), 17, 2, 6, 7), 22, 27, 30, 3, 28), 8, 1), (21, 29)), (((15, 19), 9), 25)), 16), 4), 18), (5, 20, 24)); MP score: 49
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
37
0.030530 0.084524 0.083944 0.076021 0.082871 0.024068 0.060729 0.093202 0.093769 0.082897 0.033443 0.019496 0.091378 0.022026 0.047806 0.010436 0.044019 0.097750 0.049038 0.048548 0.053832 0.013812 0.086990 0.035307 0.057349 0.069952 0.055534 0.084962 0.081454 0.036542 0.052180 0.037390 0.078133 0.059969 0.018841 0.082186 0.036486 0.078476 0.099689 0.061178 0.045415 0.103139 0.027035 0.091535 0.055433 3.386858 0.900000 1.036629 1.111775 1.300000
ntime & nrate & np: 45 2 50
Bounds (np=50):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 4.707522
np = 50
lnL0 = -1974.830265
Iterating by ming2
Initial: fx= 1974.830265
x= 0.03053 0.08452 0.08394 0.07602 0.08287 0.02407 0.06073 0.09320 0.09377 0.08290 0.03344 0.01950 0.09138 0.02203 0.04781 0.01044 0.04402 0.09775 0.04904 0.04855 0.05383 0.01381 0.08699 0.03531 0.05735 0.06995 0.05553 0.08496 0.08145 0.03654 0.05218 0.03739 0.07813 0.05997 0.01884 0.08219 0.03649 0.07848 0.09969 0.06118 0.04542 0.10314 0.02703 0.09154 0.05543 3.38686 0.90000 1.03663 1.11177 1.30000
1 h-m-p 0.0000 0.0001 1090.3399 ++ 1904.280105 m 0.0001 105 | 1/50
2 h-m-p 0.0000 0.0000 4653.0926 ++ 1877.707069 m 0.0000 208 | 2/50
3 h-m-p 0.0000 0.0000 3673.2286 ++ 1836.396392 m 0.0000 310 | 3/50
4 h-m-p 0.0000 0.0000 7447.8565 ++ 1784.407072 m 0.0000 411 | 4/50
5 h-m-p 0.0000 0.0000 2833.1445 ++ 1765.799840 m 0.0000 511 | 5/50
6 h-m-p 0.0000 0.0000 1828.5988 ++ 1744.203781 m 0.0000 610 | 6/50
7 h-m-p 0.0000 0.0000 9257.4592 ++ 1708.293141 m 0.0000 708 | 7/50
8 h-m-p 0.0000 0.0000 1552378.2176 ++ 1703.118178 m 0.0000 805 | 8/50
9 h-m-p 0.0000 0.0000 366272.2273 ++ 1690.127298 m 0.0000 901 | 9/50
10 h-m-p 0.0000 0.0000 76789.6700 ++ 1676.250101 m 0.0000 996 | 10/50
11 h-m-p 0.0000 0.0000 76496.2917 ++ 1673.901067 m 0.0000 1090 | 11/50
12 h-m-p 0.0000 0.0000 33040.2047 ++ 1669.371179 m 0.0000 1183 | 12/50
13 h-m-p 0.0000 0.0000 17828.4482 ++ 1668.363861 m 0.0000 1275 | 13/50
14 h-m-p 0.0000 0.0000 23531.9094 ++ 1615.915286 m 0.0000 1366 | 14/50
15 h-m-p 0.0000 0.0000 33099.5958 ++ 1604.575537 m 0.0000 1456 | 15/50
16 h-m-p 0.0000 0.0000 21898.8932 ++ 1600.411156 m 0.0000 1545 | 16/50
17 h-m-p 0.0000 0.0000 9866.6950 ++ 1595.986569 m 0.0000 1633 | 17/50
18 h-m-p 0.0000 0.0000 7040.9733 ++ 1593.441522 m 0.0000 1720 | 18/50
19 h-m-p 0.0000 0.0000 7189.0597 ++ 1592.898199 m 0.0000 1806 | 19/50
20 h-m-p 0.0000 0.0000 4390.0736 ++ 1587.581692 m 0.0000 1891 | 20/50
21 h-m-p 0.0000 0.0000 3732.9670 ++ 1587.529600 m 0.0000 1975 | 21/50
22 h-m-p 0.0000 0.0000 1300.2826 ++ 1582.635181 m 0.0000 2058 | 22/50
23 h-m-p 0.0000 0.0000 1530.5579 ++ 1580.469194 m 0.0000 2140 | 23/50
24 h-m-p 0.0000 0.0001 527.4887 ++ 1562.086850 m 0.0001 2221 | 23/50
25 h-m-p 0.0000 0.0000 2384.8302 YCCCC 1561.843750 4 0.0000 2308 | 23/50
26 h-m-p 0.0000 0.0000 2117.5321 +YYCYYCCC 1556.007251 7 0.0000 2399 | 23/50
27 h-m-p 0.0000 0.0000 2801.1049 +YYYYCC 1553.983857 5 0.0000 2486 | 23/50
28 h-m-p 0.0000 0.0000 789.6585 +YYCCCC 1551.600921 5 0.0000 2575 | 23/50
29 h-m-p 0.0000 0.0000 2383.9423 +YYYYCYCCC 1546.669907 8 0.0000 2667 | 23/50
30 h-m-p 0.0000 0.0000 819.8106 +YCYCCC 1544.815229 5 0.0000 2756 | 23/50
31 h-m-p 0.0000 0.0001 614.2327 +YYYCCC 1540.069247 5 0.0000 2844 | 23/50
32 h-m-p 0.0000 0.0000 1923.5353 +YCYCCC 1536.429734 5 0.0000 2933 | 23/50
33 h-m-p 0.0000 0.0000 1733.5462 +YCYCCC 1534.785497 5 0.0000 3022 | 23/50
34 h-m-p 0.0000 0.0000 585.6495 +YYCYC 1533.662202 4 0.0000 3108 | 23/50
35 h-m-p 0.0000 0.0000 1288.0983 +YYYYCCC 1531.749760 6 0.0000 3197 | 23/50
36 h-m-p 0.0001 0.0006 80.5731 +YYYCYCCC 1527.755081 7 0.0005 3288 | 23/50
37 h-m-p 0.0001 0.0004 371.3140 +YYYCYCCC 1520.786706 7 0.0003 3379 | 23/50
38 h-m-p 0.0006 0.0031 40.5224 ++ 1512.277592 m 0.0031 3459 | 23/50
39 h-m-p 0.0001 0.0006 134.6547 +YYYCCC 1509.486671 5 0.0004 3547 | 23/50
40 h-m-p 0.0001 0.0004 122.5402 +YYCYC 1508.124123 4 0.0003 3633 | 23/50
41 h-m-p 0.0000 0.0002 134.8722 ++ 1506.920335 m 0.0002 3713 | 23/50
42 h-m-p -0.0000 -0.0000 683.3234
h-m-p: -3.76960385e-22 -1.88480193e-21 6.83323415e+02 1506.920335
.. | 23/50
43 h-m-p 0.0000 0.0001 10746.8592 CYCYCCC 1500.341552 6 0.0000 3881 | 23/50
44 h-m-p 0.0000 0.0001 1006.1747 YYYCC 1496.868051 4 0.0000 3966 | 23/50
45 h-m-p 0.0000 0.0000 402.9775 +YYCCCC 1494.535013 5 0.0000 4055 | 23/50
46 h-m-p 0.0000 0.0001 221.6827 YCCC 1494.070053 3 0.0000 4140 | 23/50
47 h-m-p 0.0000 0.0002 276.5010 +YCC 1493.119939 2 0.0001 4224 | 23/50
48 h-m-p 0.0000 0.0001 438.3113 +CCC 1491.625934 2 0.0001 4309 | 23/50
49 h-m-p 0.0000 0.0000 413.3081 ++ 1491.235004 m 0.0000 4389 | 24/50
50 h-m-p 0.0000 0.0004 77.1988 YC 1491.177736 1 0.0000 4470 | 24/50
51 h-m-p 0.0000 0.0008 73.8307 +CYC 1491.023674 2 0.0001 4553 | 24/50
52 h-m-p 0.0000 0.0004 289.9819 YCCC 1490.732774 3 0.0001 4637 | 24/50
53 h-m-p 0.0000 0.0005 538.5873 +YCYYCC 1487.689175 5 0.0004 4725 | 24/50
54 h-m-p 0.0000 0.0000 7459.3566 ++ 1484.260865 m 0.0000 4804 | 24/50
55 h-m-p 0.0000 0.0000 9669.5611
h-m-p: 1.30816184e-22 6.54080918e-22 9.66956106e+03 1484.260865
.. | 24/50
56 h-m-p 0.0000 0.0001 1698.8343 CYYYCCCC 1482.277613 7 0.0000 4970 | 24/50
57 h-m-p 0.0000 0.0000 506.8025 +YCYCCC 1478.919553 5 0.0000 5058 | 24/50
58 h-m-p 0.0000 0.0001 415.2429 +YYCCCC 1476.273479 5 0.0000 5146 | 24/50
59 h-m-p 0.0000 0.0000 410.6886 CCC 1475.876670 2 0.0000 5229 | 24/50
60 h-m-p 0.0000 0.0001 209.3317 CCCCC 1475.532684 4 0.0000 5316 | 24/50
61 h-m-p 0.0001 0.0003 96.7645 YC 1475.436334 1 0.0000 5396 | 24/50
62 h-m-p 0.0000 0.0002 64.6305 CC 1475.384561 1 0.0000 5477 | 24/50
63 h-m-p 0.0000 0.0005 76.4879 CCC 1475.330227 2 0.0000 5560 | 24/50
64 h-m-p 0.0000 0.0002 104.0161 CCC 1475.264746 2 0.0000 5643 | 24/50
65 h-m-p 0.0000 0.0008 119.9870 CCC 1475.214130 2 0.0000 5726 | 24/50
66 h-m-p 0.0000 0.0009 95.0339 +YYC 1475.052757 2 0.0001 5808 | 24/50
67 h-m-p 0.0000 0.0002 163.4244 YCC 1475.019211 2 0.0000 5890 | 24/50
68 h-m-p 0.0001 0.0007 27.8301 YC 1475.015106 1 0.0000 5970 | 23/50
69 h-m-p 0.0000 0.0028 23.0276 +CYC 1474.987079 2 0.0001 6053 | 23/50
70 h-m-p 0.0001 0.0005 18.3018 YC 1474.985156 1 0.0000 6134 | 23/50
71 h-m-p 0.0001 0.0123 6.1480 C 1474.984402 0 0.0001 6214 | 23/50
72 h-m-p 0.0003 0.0067 1.2030 -C 1474.984391 0 0.0000 6295 | 23/50
73 h-m-p 0.0003 0.1678 0.2905 C 1474.984353 0 0.0003 6375 | 23/50
74 h-m-p 0.0001 0.0201 0.5717 C 1474.984331 0 0.0001 6455 | 23/50
75 h-m-p 0.0003 0.1531 0.6272 +++CC 1474.958862 1 0.0200 6540 | 23/50
76 h-m-p 0.0000 0.0004 788.0615 +CC 1474.858103 1 0.0001 6623 | 23/50
77 h-m-p 0.0002 0.0009 21.9027 -C 1474.857635 0 0.0000 6704 | 23/50
78 h-m-p 0.0024 0.1049 0.1074 -C 1474.857627 0 0.0001 6785 | 23/50
79 h-m-p 0.0014 0.7097 0.3526 +++CCC 1474.775711 2 0.1335 6872 | 23/50
80 h-m-p 0.0000 0.0001 1613.0609 YYCC 1474.708704 3 0.0000 6956 | 23/50
81 h-m-p 0.0003 0.0013 5.5952 -C 1474.708605 0 0.0000 7037 | 23/50
82 h-m-p 0.0090 4.4903 0.1884 +++CC 1474.655851 1 0.7965 7122 | 23/50
83 h-m-p 1.2963 6.4814 0.0302 YC 1474.643081 1 0.9150 7203 | 23/50
84 h-m-p 1.6000 8.0000 0.0086 YC 1474.642250 1 0.9052 7284 | 23/50
85 h-m-p 1.6000 8.0000 0.0046 YC 1474.642176 1 1.0646 7365 | 23/50
86 h-m-p 1.2834 8.0000 0.0038 +Y 1474.642106 0 3.8838 7446 | 23/50
87 h-m-p 0.9034 8.0000 0.0164 ++ 1474.641501 m 8.0000 7526 | 23/50
88 h-m-p 0.3494 1.7469 0.2984 +YC 1474.640584 1 0.9438 7608 | 23/50
89 h-m-p 0.4715 2.3576 0.1143 +YC 1474.640117 1 1.3686 7690 | 23/50
90 h-m-p 1.6000 8.0000 0.0551 C 1474.639965 0 0.5770 7770 | 23/50
91 h-m-p 0.7293 4.3734 0.0436 ++ 1474.639725 m 4.3734 7850 | 23/50
92 h-m-p -0.0000 -0.0000 0.0262
h-m-p: -0.00000000e+00 -0.00000000e+00 2.62057626e-02 1474.639725
.. | 23/50
93 h-m-p 0.0000 0.0021 2.6736 C 1474.639675 0 0.0000 8007 | 23/50
94 h-m-p 0.0001 0.0174 0.6180 Y 1474.639667 0 0.0000 8087 | 23/50
95 h-m-p 0.0001 0.0267 0.8545 C 1474.639658 0 0.0001 8167 | 23/50
96 h-m-p 0.0000 0.0205 1.0822 C 1474.639650 0 0.0000 8247 | 23/50
97 h-m-p 0.0001 0.0258 1.0050 Y 1474.639646 0 0.0000 8327 | 23/50
98 h-m-p 0.0001 0.0494 0.3287 Y 1474.639645 0 0.0000 8407 | 23/50
99 h-m-p 0.0001 0.0345 0.4594 C 1474.639643 0 0.0001 8487 | 23/50
100 h-m-p 0.0002 0.0894 0.8208 Y 1474.639638 0 0.0001 8567 | 23/50
101 h-m-p 0.0001 0.0467 1.0958 Y 1474.639634 0 0.0001 8647 | 23/50
102 h-m-p 0.0001 0.0422 2.1139 Y 1474.639628 0 0.0000 8727 | 23/50
103 h-m-p 0.0002 0.0863 1.0830 C 1474.639617 0 0.0002 8807 | 23/50
104 h-m-p 0.0002 0.0742 1.0305 C 1474.639614 0 0.0001 8887 | 23/50
105 h-m-p 0.0001 0.0357 2.0431 Y 1474.639610 0 0.0000 8967 | 23/50
106 h-m-p 0.0001 0.0671 0.5458 C 1474.639609 0 0.0000 9047 | 23/50
107 h-m-p 0.0003 0.1716 0.0878 Y 1474.639609 0 0.0000 9127 | 23/50
108 h-m-p 0.0005 0.2657 0.0937 --Y 1474.639609 0 0.0000 9209 | 23/50
109 h-m-p 0.0160 8.0000 0.0062 ---Y 1474.639609 0 0.0000 9292 | 23/50
110 h-m-p 0.0080 4.0142 0.1912 +Y 1474.639578 0 0.0548 9373 | 23/50
111 h-m-p 0.0000 0.0011 675.5516 +C 1474.639430 0 0.0001 9454 | 23/50
112 h-m-p 0.0170 0.0852 1.9921 ----Y 1474.639430 0 0.0000 9538 | 23/50
113 h-m-p 0.0131 6.5309 0.0454 C 1474.639430 0 0.0029 9618 | 23/50
114 h-m-p 0.0001 0.0723 9.9827 +++YC 1474.639094 1 0.0093 9702 | 23/50
115 h-m-p 0.0005 0.0033 192.3405 --Y 1474.639088 0 0.0000 9784 | 23/50
116 h-m-p 0.0224 0.6749 0.1108 ---C 1474.639088 0 0.0001 9867 | 23/50
117 h-m-p 0.0025 1.2392 0.8833 +++YY 1474.638748 1 0.1252 9951 | 23/50
118 h-m-p 0.0001 0.0008 1209.3793 YC 1474.638692 1 0.0000 10032 | 23/50
119 h-m-p 0.3218 1.6091 0.0108 ----Y 1474.638692 0 0.0002 10116 | 23/50
120 h-m-p 0.0160 8.0000 0.1346 YC 1474.638608 1 0.0302 10197 | 23/50
121 h-m-p 0.0644 8.0000 0.0631 ++CC 1474.638438 1 1.6166 10281 | 23/50
122 h-m-p 1.6000 8.0000 0.0333 C 1474.638377 0 2.5311 10361 | 23/50
123 h-m-p 1.6000 8.0000 0.0070 +Y 1474.638314 0 5.2188 10442 | 23/50
124 h-m-p 0.6316 8.0000 0.0578 +C 1474.638125 0 2.7952 10523 | 23/50
125 h-m-p 0.6920 8.0000 0.2333 +CC 1474.636798 1 3.2446 10606 | 23/50
126 h-m-p 0.7807 3.9033 0.2690 CCC 1474.636054 2 1.1790 10690 | 23/50
127 h-m-p 0.7552 8.0000 0.4200 CC 1474.635426 1 1.2393 10772 | 23/50
128 h-m-p 1.6000 8.0000 0.2334 YCY 1474.634134 2 3.0227 10855 | 23/50
129 h-m-p 0.3610 3.2116 1.9540 YC 1474.632826 1 0.7195 10936 | 23/50
130 h-m-p 1.6000 8.0000 0.5181 CC 1474.632317 1 2.3329 11018 | 23/50
131 h-m-p 0.7752 8.0000 1.5592 C 1474.631859 0 0.6385 11098 | 23/50
132 h-m-p 1.4843 8.0000 0.6707 C 1474.630970 0 1.4843 11178 | 23/50
133 h-m-p 0.4728 8.0000 2.1057 +YC 1474.630114 1 1.5370 11260 | 23/50
134 h-m-p 1.6000 8.0000 1.4329 YC 1474.629172 1 3.5419 11341 | 23/50
135 h-m-p 1.4398 8.0000 3.5250 C 1474.628328 0 1.4398 11421 | 23/50
136 h-m-p 1.6000 8.0000 2.6583 C 1474.627923 0 1.7107 11501 | 23/50
137 h-m-p 0.5601 8.0000 8.1188 +YC 1474.627296 1 1.5802 11583 | 23/50
138 h-m-p 1.6000 8.0000 4.9981 YC 1474.626783 1 2.8080 11664 | 23/50
139 h-m-p 0.8435 4.2175 10.6028 +YC 1474.626395 1 2.2255 11746 | 23/50
140 h-m-p 0.4465 2.2327 9.4603 ++ 1474.626144 m 2.2327 11826 | 23/50
141 h-m-p 0.0000 0.0000 27.0225
h-m-p: 0.00000000e+00 0.00000000e+00 2.70225322e+01 1474.626144
.. | 23/50
142 h-m-p 0.0000 0.0146 0.8897 Y 1474.626139 0 0.0000 11983 | 23/50
143 h-m-p 0.0001 0.0725 0.1882 C 1474.626139 0 0.0000 12063 | 23/50
144 h-m-p 0.0002 0.1016 0.1650 C 1474.626138 0 0.0000 12143 | 23/50
145 h-m-p 0.0002 0.0839 0.2264 Y 1474.626138 0 0.0000 12223 | 23/50
146 h-m-p 0.0005 0.2451 0.1217 -C 1474.626138 0 0.0000 12304 | 23/50
147 h-m-p 0.0009 0.4714 0.0463 -Y 1474.626138 0 0.0000 12385 | 23/50
148 h-m-p 0.0015 0.7391 0.0171 --C 1474.626138 0 0.0000 12467 | 23/50
149 h-m-p 0.0038 1.9249 0.0147 ---Y 1474.626138 0 0.0000 12550 | 23/50
150 h-m-p 0.0143 7.1651 0.0033 --C 1474.626138 0 0.0003 12632 | 23/50
151 h-m-p 0.0046 2.3016 0.0096 -------Y 1474.626138 0 0.0000 12719 | 23/50
152 h-m-p 0.0117 5.8366 0.0135 --C 1474.626138 0 0.0002 12801 | 23/50
153 h-m-p 0.0042 2.1114 0.0523 --Y 1474.626138 0 0.0000 12883 | 23/50
154 h-m-p 0.0031 1.5677 0.1074 --Y 1474.626138 0 0.0001 12965 | 23/50
155 h-m-p 0.0025 1.2616 0.2464 -C 1474.626138 0 0.0002 13046 | 23/50
156 h-m-p 0.0012 0.6167 0.4469 -Y 1474.626138 0 0.0000 13127 | 23/50
157 h-m-p 0.0005 0.2250 2.0052 C 1474.626137 0 0.0004 13207 | 23/50
158 h-m-p 0.0094 0.4239 0.0932 ---C 1474.626137 0 0.0000 13290 | 23/50
159 h-m-p 0.0007 0.2505 0.0051 +C 1474.626137 0 0.0032 13371 | 23/50
160 h-m-p 0.0000 0.0016 0.7945 ++++ 1474.626135 m 0.0016 13453 | 23/50
161 h-m-p 0.0000 0.0000 1.5598
h-m-p: 0.00000000e+00 0.00000000e+00 1.55977089e+00 1474.626135
.. | 23/50
162 h-m-p 0.0001 0.0363 0.2159 Y 1474.626134 0 0.0000 13610 | 23/50
163 h-m-p 0.0015 0.7442 0.0413 --Y 1474.626134 0 0.0000 13692 | 23/50
164 h-m-p 0.0006 0.3005 0.0549 -Y 1474.626134 0 0.0000 13773 | 23/50
165 h-m-p 0.0031 1.5415 0.0193 --C 1474.626134 0 0.0000 13855 | 23/50
166 h-m-p 0.0044 2.2179 0.0117 --Y 1474.626134 0 0.0000 13937 | 23/50
167 h-m-p 0.0039 1.9473 0.0119 ---Y 1474.626134 0 0.0000 14020 | 23/50
168 h-m-p 0.0160 8.0000 0.0060 ----C 1474.626134 0 0.0000 14104 | 23/50
169 h-m-p 0.0050 2.5058 0.0034 --Y 1474.626134 0 0.0000 14186 | 23/50
170 h-m-p 0.0160 8.0000 0.0036 ---------Y 1474.626134 0 0.0000 14275 | 23/50
171 h-m-p 0.0076 3.7972 0.0052 -Y 1474.626134 0 0.0003 14356 | 23/50
172 h-m-p 0.0160 8.0000 0.0123 --C 1474.626134 0 0.0002 14438 | 23/50
173 h-m-p 0.0028 1.3885 0.1017 --Y 1474.626134 0 0.0001 14520 | 23/50
174 h-m-p 0.0027 1.3577 0.3051 -C 1474.626134 0 0.0002 14601 | 23/50
175 h-m-p 0.0011 0.5304 0.4860 -C 1474.626134 0 0.0001 14682 | 23/50
176 h-m-p 0.0020 0.9770 0.4231 ---Y 1474.626134 0 0.0000 14765 | 23/50
177 h-m-p 0.0008 0.4040 1.0227 -C 1474.626134 0 0.0001 14846 | 23/50
178 h-m-p 0.0072 0.0361 0.0031 -C 1474.626134 0 0.0005 14927 | 23/50
179 h-m-p 0.0001 0.0076 0.0100 +++ 1474.626134 m 0.0076 15008 | 23/50
180 h-m-p 0.0000 0.0000 38.5752
h-m-p: 0.00000000e+00 0.00000000e+00 3.85752179e+01 1474.626134
.. | 23/50
181 h-m-p 0.0002 0.0767 0.1056 -C 1474.626134 0 0.0000 15166 | 23/50
182 h-m-p 0.0027 1.3568 0.0409 --Y 1474.626134 0 0.0000 15248 | 23/50
183 h-m-p 0.0014 0.7063 0.0137 -C 1474.626134 0 0.0001 15329 | 23/50
184 h-m-p 0.0047 2.3605 0.0132 -------C 1474.626134 0 0.0000 15416 | 23/50
185 h-m-p 0.0128 6.3767 0.0051 ---C 1474.626134 0 0.0001 15499 | 23/50
186 h-m-p 0.0160 8.0000 0.0041 ---C 1474.626134 0 0.0001 15582 | 23/50
187 h-m-p 0.0113 5.6515 0.0062 ---C 1474.626134 0 0.0000 15665 | 23/50
188 h-m-p 0.0160 8.0000 0.0030 ---Y 1474.626134 0 0.0000 15748 | 23/50
189 h-m-p 0.0049 2.4387 0.0076 --C 1474.626134 0 0.0001 15830 | 23/50
190 h-m-p 0.0139 6.9479 0.0070 --Y 1474.626134 0 0.0002 15912 | 23/50
191 h-m-p 0.0075 3.7312 0.0475 --Y 1474.626134 0 0.0001 15994 | 23/50
192 h-m-p 0.0103 5.1483 0.0782 ----C 1474.626134 0 0.0000 16078 | 23/50
193 h-m-p 0.0006 0.3248 1.2394 C 1474.626134 0 0.0002 16158 | 23/50
194 h-m-p 0.0004 0.1878 2.1416 Y 1474.626134 0 0.0001 16238 | 23/50
195 h-m-p 0.0002 0.0935 4.2978 Y 1474.626134 0 0.0001 16318 | 23/50
196 h-m-p 0.0000 0.0229 17.5081 Y 1474.626133 0 0.0001 16398 | 23/50
197 h-m-p 0.0269 0.9103 0.0503 ------Y 1474.626133 0 0.0000 16484 | 23/50
198 h-m-p 0.0043 2.1512 0.0006 ------------.. | 23/50
199 h-m-p 0.0002 0.1000 0.0712 -C 1474.626133 0 0.0000 16655 | 23/50
200 h-m-p 0.0038 1.8815 0.0065 -----------Y 1474.626133 0 0.0000 16746 | 23/50
201 h-m-p 0.0003 0.1514 0.0157 ------Y 1474.626133 0 0.0000 16832 | 23/50
202 h-m-p 0.0006 0.2910 0.0070 -----------.. | 23/50
203 h-m-p 0.0005 0.2294 0.0313 ---------Y 1474.626133 0 0.0000 17010 | 23/50
204 h-m-p 0.0063 3.1270 0.0040 --Y 1474.626133 0 0.0001 17092 | 23/50
205 h-m-p 0.0093 4.6493 0.0092 -------C 1474.626133 0 0.0000 17179 | 23/50
206 h-m-p 0.0071 3.5320 0.0070 ---C 1474.626133 0 0.0000 17262 | 23/50
207 h-m-p 0.0074 3.7058 0.0067 ------Y 1474.626133 0 0.0000 17348 | 23/50
208 h-m-p 0.0094 4.6815 0.0140 --------C 1474.626133 0 0.0000 17436 | 23/50
209 h-m-p 0.0109 5.4548 0.0108 -------------.. | 23/50
210 h-m-p 0.0006 0.2868 0.0307 -----------
Out..
lnL = -1474.626133
17617 lfun, 211404 eigenQcodon, 8720415 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -1490.934238 S = -1455.492390 -76.153817
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 91 patterns 1:19:59
did 20 / 91 patterns 1:19:59
did 30 / 91 patterns 1:19:59
did 40 / 91 patterns 1:19:59
did 50 / 91 patterns 1:19:59
did 60 / 91 patterns 1:20:00
did 70 / 91 patterns 1:20:00
did 80 / 91 patterns 1:20:00
did 90 / 91 patterns 1:20:00
did 91 / 91 patterns 1:20:00end of tree file.
Time used: 1:20:00
The loglikelihoods for models M1, M2, M7 and M8 are -1474.627791 -1474.625386 -1474.647618 -1474.626133 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
OC43_human_USA_911_66_1991_nsp13_VIPR_ALG4_530802478_20592_21488_1_1991_01_29_USA_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
HCoV_OC43_Seattle_USA_SC9741_2016_nsp13_VIPR_ALG4_APU51939_1_20597_21493_1_2016_USA_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
CC_23_nsp13_VIPR_ALG4_AXX83324_1_20519_21415_1_2015_07_13_China_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
TCG_7_nsp13_VIPR_ALG4_BBM61384_1_20568_21464_1_2008_01_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
IWT_24_nsp13_VIPR_ALG4_BBM61154_1_20571_21467_1_2017_01_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
HCoV_OC43_Seattle_USA_SC2730_2015_nsp13_VIPR_ALG4_ARK08657_1_20565_21461_1_2015_USA_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
12689_2012_nsp13_VIPR_ALG4_701216729_20597_21493_1_2012_05_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
OC43_human_USA_913_29_1991_nsp13_VIPR_ALG4_530802368_20578_21474_1_1991_03_14_USA_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
DcCoV_HKU23_camel_Nigeria_NV1097_2015_nsp13_VIPR_ALG4_QEY10654_1_20585_21481_1_2015_11_12_Nigeria_Camel_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
IWT_15_nsp13_VIPR_ALG4_BBM61064_1_20567_21463_1_2016_01_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
5370_2007_nsp13_VIPR_ALG4_701216764_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
TCG_12_nsp13_VIPR_ALG4_BBM61324_1_20570_21466_1_2008_12_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
GZYF_26_nsp13_VIPR_ALG4_AXX83330_1_20522_21418_1_2015_05_21_China_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
IWT_16_nsp13_VIPR_ALG4_BBM61114_1_20571_21467_1_2016_07_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
DcCoV_HKU23_camel_Nigeria_NV1010_2015_nsp13_VIPR_ALG4_QEY10638_1_20580_21476_1_2015_11_20_Nigeria_Camel_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
R_AH65_TC_nsp13_VIPR_ALG4_145208926_20579_21475_1_NA_USA_Cattle_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
MY_U1057_12_nsp13_VIPR_ALG4_AQN78749_1_20597_21493_1_2012_08_27_Malaysia_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
TCG_5_nsp13_VIPR_ALG4_BBM61264_1_20561_21457_1_2007_12_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
DcCoV_HKU23_camel_Nigeria_NV1092_2015_nsp13_VIPR_ALG4_QEY10646_1_20593_21489_1_2015_11_23_Nigeria_Camel_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
IWT_23_nsp13_VIPR_ALG4_BBM61144_1_20561_21457_1_2016_12_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
3074A_2012_nsp13_VIPR_ALG4_701216687_20597_21493_1_2012_02_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
5617_2007_nsp13_VIPR_ALG4_701216855_20597_21493_1_2007_07_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
IWT_3_nsp13_VIPR_ALG4_BBM60964_1_20571_21467_1_2011_06_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
IWT_26_nsp13_VIPR_ALG4_BBM61174_1_20567_21463_1_2017_02_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
E_DB2_TC_nsp13_VIPR_ALG4_251748077_20579_21475_1_1996_11_30_USA_Cattle_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
BJ_124_nsp13_VIPR_ALG4_AXX83300_1_20502_21398_1_2015_05_06_China_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
3582_2006_nsp13_VIPR_ALG4_701216708_20597_21493_1_2006_09_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
8164_2009_nsp13_VIPR_ALG4_701216869_20597_21493_1_2009_03_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
3194A_2012_nsp13_VIPR_ALG4_701216757_20597_21493_1_2012_03_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
5345_2007_nsp13_VIPR_ALG4_701216659_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLA
************************************************************
OC43_human_USA_911_66_1991_nsp13_VIPR_ALG4_530802478_20592_21488_1_1991_01_29_USA_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
HCoV_OC43_Seattle_USA_SC9741_2016_nsp13_VIPR_ALG4_APU51939_1_20597_21493_1_2016_USA_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
CC_23_nsp13_VIPR_ALG4_AXX83324_1_20519_21415_1_2015_07_13_China_Unknown_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
TCG_7_nsp13_VIPR_ALG4_BBM61384_1_20568_21464_1_2008_01_Japan_Unknown_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
IWT_24_nsp13_VIPR_ALG4_BBM61154_1_20571_21467_1_2017_01_Japan_Unknown_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
HCoV_OC43_Seattle_USA_SC2730_2015_nsp13_VIPR_ALG4_ARK08657_1_20565_21461_1_2015_USA_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
12689_2012_nsp13_VIPR_ALG4_701216729_20597_21493_1_2012_05_China_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
OC43_human_USA_913_29_1991_nsp13_VIPR_ALG4_530802368_20578_21474_1_1991_03_14_USA_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
DcCoV_HKU23_camel_Nigeria_NV1097_2015_nsp13_VIPR_ALG4_QEY10654_1_20585_21481_1_2015_11_12_Nigeria_Camel_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
IWT_15_nsp13_VIPR_ALG4_BBM61064_1_20567_21463_1_2016_01_Japan_Unknown_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
5370_2007_nsp13_VIPR_ALG4_701216764_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
TCG_12_nsp13_VIPR_ALG4_BBM61324_1_20570_21466_1_2008_12_Japan_Unknown_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
GZYF_26_nsp13_VIPR_ALG4_AXX83330_1_20522_21418_1_2015_05_21_China_Unknown_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
IWT_16_nsp13_VIPR_ALG4_BBM61114_1_20571_21467_1_2016_07_Japan_Unknown_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
DcCoV_HKU23_camel_Nigeria_NV1010_2015_nsp13_VIPR_ALG4_QEY10638_1_20580_21476_1_2015_11_20_Nigeria_Camel_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
R_AH65_TC_nsp13_VIPR_ALG4_145208926_20579_21475_1_NA_USA_Cattle_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
MY_U1057_12_nsp13_VIPR_ALG4_AQN78749_1_20597_21493_1_2012_08_27_Malaysia_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
TCG_5_nsp13_VIPR_ALG4_BBM61264_1_20561_21457_1_2007_12_Japan_Unknown_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
DcCoV_HKU23_camel_Nigeria_NV1092_2015_nsp13_VIPR_ALG4_QEY10646_1_20593_21489_1_2015_11_23_Nigeria_Camel_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
IWT_23_nsp13_VIPR_ALG4_BBM61144_1_20561_21457_1_2016_12_Japan_Unknown_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
3074A_2012_nsp13_VIPR_ALG4_701216687_20597_21493_1_2012_02_China_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
5617_2007_nsp13_VIPR_ALG4_701216855_20597_21493_1_2007_07_China_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
IWT_3_nsp13_VIPR_ALG4_BBM60964_1_20571_21467_1_2011_06_Japan_Unknown_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
IWT_26_nsp13_VIPR_ALG4_BBM61174_1_20567_21463_1_2017_02_Japan_Unknown_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
E_DB2_TC_nsp13_VIPR_ALG4_251748077_20579_21475_1_1996_11_30_USA_Cattle_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
BJ_124_nsp13_VIPR_ALG4_AXX83300_1_20502_21398_1_2015_05_06_China_Unknown_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
3582_2006_nsp13_VIPR_ALG4_701216708_20597_21493_1_2006_09_China_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
8164_2009_nsp13_VIPR_ALG4_701216869_20597_21493_1_2009_03_China_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
3194A_2012_nsp13_VIPR_ALG4_701216757_20597_21493_1_2012_03_China_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
5345_2007_nsp13_VIPR_ALG4_701216659_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 VPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPF
************************************************************
OC43_human_USA_911_66_1991_nsp13_VIPR_ALG4_530802478_20592_21488_1_1991_01_29_USA_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
HCoV_OC43_Seattle_USA_SC9741_2016_nsp13_VIPR_ALG4_APU51939_1_20597_21493_1_2016_USA_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
CC_23_nsp13_VIPR_ALG4_AXX83324_1_20519_21415_1_2015_07_13_China_Unknown_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
TCG_7_nsp13_VIPR_ALG4_BBM61384_1_20568_21464_1_2008_01_Japan_Unknown_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
IWT_24_nsp13_VIPR_ALG4_BBM61154_1_20571_21467_1_2017_01_Japan_Unknown_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
HCoV_OC43_Seattle_USA_SC2730_2015_nsp13_VIPR_ALG4_ARK08657_1_20565_21461_1_2015_USA_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
12689_2012_nsp13_VIPR_ALG4_701216729_20597_21493_1_2012_05_China_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
OC43_human_USA_913_29_1991_nsp13_VIPR_ALG4_530802368_20578_21474_1_1991_03_14_USA_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
DcCoV_HKU23_camel_Nigeria_NV1097_2015_nsp13_VIPR_ALG4_QEY10654_1_20585_21481_1_2015_11_12_Nigeria_Camel_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMVRDKLALGGSVAIKITEFSWNAEL
IWT_15_nsp13_VIPR_ALG4_BBM61064_1_20567_21463_1_2016_01_Japan_Unknown_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
5370_2007_nsp13_VIPR_ALG4_701216764_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
TCG_12_nsp13_VIPR_ALG4_BBM61324_1_20570_21466_1_2008_12_Japan_Unknown_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
GZYF_26_nsp13_VIPR_ALG4_AXX83330_1_20522_21418_1_2015_05_21_China_Unknown_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
IWT_16_nsp13_VIPR_ALG4_BBM61114_1_20571_21467_1_2016_07_Japan_Unknown_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
DcCoV_HKU23_camel_Nigeria_NV1010_2015_nsp13_VIPR_ALG4_QEY10638_1_20580_21476_1_2015_11_20_Nigeria_Camel_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICYMVRDKLALGGSVAIKITEFSWNAEL
R_AH65_TC_nsp13_VIPR_ALG4_145208926_20579_21475_1_NA_USA_Cattle_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
MY_U1057_12_nsp13_VIPR_ALG4_AQN78749_1_20597_21493_1_2012_08_27_Malaysia_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
TCG_5_nsp13_VIPR_ALG4_BBM61264_1_20561_21457_1_2007_12_Japan_Unknown_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
DcCoV_HKU23_camel_Nigeria_NV1092_2015_nsp13_VIPR_ALG4_QEY10646_1_20593_21489_1_2015_11_23_Nigeria_Camel_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICYMVRDKLALGGSVAIKITEFSWNAEL
IWT_23_nsp13_VIPR_ALG4_BBM61144_1_20561_21457_1_2016_12_Japan_Unknown_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
3074A_2012_nsp13_VIPR_ALG4_701216687_20597_21493_1_2012_02_China_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
5617_2007_nsp13_VIPR_ALG4_701216855_20597_21493_1_2007_07_China_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
IWT_3_nsp13_VIPR_ALG4_BBM60964_1_20571_21467_1_2011_06_Japan_Unknown_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
IWT_26_nsp13_VIPR_ALG4_BBM61174_1_20567_21463_1_2017_02_Japan_Unknown_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
E_DB2_TC_nsp13_VIPR_ALG4_251748077_20579_21475_1_1996_11_30_USA_Cattle_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
BJ_124_nsp13_VIPR_ALG4_AXX83300_1_20502_21398_1_2015_05_06_China_Unknown_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
3582_2006_nsp13_VIPR_ALG4_701216708_20597_21493_1_2006_09_China_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
8164_2009_nsp13_VIPR_ALG4_701216869_20597_21493_1_2009_03_China_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
3194A_2012_nsp13_VIPR_ALG4_701216757_20597_21493_1_2012_03_China_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
5345_2007_nsp13_VIPR_ALG4_701216659_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 DCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAEL
**********************************:*:***********************
OC43_human_USA_911_66_1991_nsp13_VIPR_ALG4_530802478_20592_21488_1_1991_01_29_USA_Human_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
HCoV_OC43_Seattle_USA_SC9741_2016_nsp13_VIPR_ALG4_APU51939_1_20597_21493_1_2016_USA_Human_Betacoronavirus_1 YNLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
CC_23_nsp13_VIPR_ALG4_AXX83324_1_20519_21415_1_2015_07_13_China_Unknown_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
TCG_7_nsp13_VIPR_ALG4_BBM61384_1_20568_21464_1_2008_01_Japan_Unknown_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGG
IWT_24_nsp13_VIPR_ALG4_BBM61154_1_20571_21467_1_2017_01_Japan_Unknown_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGSVMHANYLFWRNSTVWNGG
HCoV_OC43_Seattle_USA_SC2730_2015_nsp13_VIPR_ALG4_ARK08657_1_20565_21461_1_2015_USA_Human_Betacoronavirus_1 YNLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
12689_2012_nsp13_VIPR_ALG4_701216729_20597_21493_1_2012_05_China_Human_Betacoronavirus_1 YNLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
OC43_human_USA_913_29_1991_nsp13_VIPR_ALG4_530802368_20578_21474_1_1991_03_14_USA_Human_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
DcCoV_HKU23_camel_Nigeria_NV1097_2015_nsp13_VIPR_ALG4_QEY10654_1_20585_21481_1_2015_11_12_Nigeria_Camel_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGG
IWT_15_nsp13_VIPR_ALG4_BBM61064_1_20567_21463_1_2016_01_Japan_Unknown_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGG
5370_2007_nsp13_VIPR_ALG4_701216764_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
TCG_12_nsp13_VIPR_ALG4_BBM61324_1_20570_21466_1_2008_12_Japan_Unknown_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGG
GZYF_26_nsp13_VIPR_ALG4_AXX83330_1_20522_21418_1_2015_05_21_China_Unknown_Betacoronavirus_1 YNLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
IWT_16_nsp13_VIPR_ALG4_BBM61114_1_20571_21467_1_2016_07_Japan_Unknown_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGG
DcCoV_HKU23_camel_Nigeria_NV1010_2015_nsp13_VIPR_ALG4_QEY10638_1_20580_21476_1_2015_11_20_Nigeria_Camel_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGG
R_AH65_TC_nsp13_VIPR_ALG4_145208926_20579_21475_1_NA_USA_Cattle_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGG
MY_U1057_12_nsp13_VIPR_ALG4_AQN78749_1_20597_21493_1_2012_08_27_Malaysia_Human_Betacoronavirus_1 YNLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
TCG_5_nsp13_VIPR_ALG4_BBM61264_1_20561_21457_1_2007_12_Japan_Unknown_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGG
DcCoV_HKU23_camel_Nigeria_NV1092_2015_nsp13_VIPR_ALG4_QEY10646_1_20593_21489_1_2015_11_23_Nigeria_Camel_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGG
IWT_23_nsp13_VIPR_ALG4_BBM61144_1_20561_21457_1_2016_12_Japan_Unknown_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGSVMHANYLFWRNSTVWNGG
3074A_2012_nsp13_VIPR_ALG4_701216687_20597_21493_1_2012_02_China_Human_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
5617_2007_nsp13_VIPR_ALG4_701216855_20597_21493_1_2007_07_China_Human_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
IWT_3_nsp13_VIPR_ALG4_BBM60964_1_20571_21467_1_2011_06_Japan_Unknown_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGG
IWT_26_nsp13_VIPR_ALG4_BBM61174_1_20567_21463_1_2017_02_Japan_Unknown_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGSVMHANYLFWRNSTVWNGG
E_DB2_TC_nsp13_VIPR_ALG4_251748077_20579_21475_1_1996_11_30_USA_Cattle_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGG
BJ_124_nsp13_VIPR_ALG4_AXX83300_1_20502_21398_1_2015_05_06_China_Unknown_Betacoronavirus_1 YNLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
3582_2006_nsp13_VIPR_ALG4_701216708_20597_21493_1_2006_09_China_Human_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
8164_2009_nsp13_VIPR_ALG4_701216869_20597_21493_1_2009_03_China_Human_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
3194A_2012_nsp13_VIPR_ALG4_701216757_20597_21493_1_2012_03_China_Human_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
5345_2007_nsp13_VIPR_ALG4_701216659_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 YKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGG
*:****************************** ********.******************
OC43_human_USA_911_66_1991_nsp13_VIPR_ALG4_530802478_20592_21488_1_1991_01_29_USA_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
HCoV_OC43_Seattle_USA_SC9741_2016_nsp13_VIPR_ALG4_APU51939_1_20597_21493_1_2016_USA_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
CC_23_nsp13_VIPR_ALG4_AXX83324_1_20519_21415_1_2015_07_13_China_Unknown_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
TCG_7_nsp13_VIPR_ALG4_BBM61384_1_20568_21464_1_2008_01_Japan_Unknown_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNLI
IWT_24_nsp13_VIPR_ALG4_BBM61154_1_20571_21467_1_2017_01_Japan_Unknown_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI
HCoV_OC43_Seattle_USA_SC2730_2015_nsp13_VIPR_ALG4_ARK08657_1_20565_21461_1_2015_USA_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
12689_2012_nsp13_VIPR_ALG4_701216729_20597_21493_1_2012_05_China_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
OC43_human_USA_913_29_1991_nsp13_VIPR_ALG4_530802368_20578_21474_1_1991_03_14_USA_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
DcCoV_HKU23_camel_Nigeria_NV1097_2015_nsp13_VIPR_ALG4_QEY10654_1_20585_21481_1_2015_11_12_Nigeria_Camel_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNII
IWT_15_nsp13_VIPR_ALG4_BBM61064_1_20567_21463_1_2016_01_Japan_Unknown_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI
5370_2007_nsp13_VIPR_ALG4_701216764_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
TCG_12_nsp13_VIPR_ALG4_BBM61324_1_20570_21466_1_2008_12_Japan_Unknown_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI
GZYF_26_nsp13_VIPR_ALG4_AXX83330_1_20522_21418_1_2015_05_21_China_Unknown_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
IWT_16_nsp13_VIPR_ALG4_BBM61114_1_20571_21467_1_2016_07_Japan_Unknown_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI
DcCoV_HKU23_camel_Nigeria_NV1010_2015_nsp13_VIPR_ALG4_QEY10638_1_20580_21476_1_2015_11_20_Nigeria_Camel_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNII
R_AH65_TC_nsp13_VIPR_ALG4_145208926_20579_21475_1_NA_USA_Cattle_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI
MY_U1057_12_nsp13_VIPR_ALG4_AQN78749_1_20597_21493_1_2012_08_27_Malaysia_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
TCG_5_nsp13_VIPR_ALG4_BBM61264_1_20561_21457_1_2007_12_Japan_Unknown_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI
DcCoV_HKU23_camel_Nigeria_NV1092_2015_nsp13_VIPR_ALG4_QEY10646_1_20593_21489_1_2015_11_23_Nigeria_Camel_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNII
IWT_23_nsp13_VIPR_ALG4_BBM61144_1_20561_21457_1_2016_12_Japan_Unknown_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI
3074A_2012_nsp13_VIPR_ALG4_701216687_20597_21493_1_2012_02_China_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
5617_2007_nsp13_VIPR_ALG4_701216855_20597_21493_1_2007_07_China_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
IWT_3_nsp13_VIPR_ALG4_BBM60964_1_20571_21467_1_2011_06_Japan_Unknown_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI
IWT_26_nsp13_VIPR_ALG4_BBM61174_1_20567_21463_1_2017_02_Japan_Unknown_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI
E_DB2_TC_nsp13_VIPR_ALG4_251748077_20579_21475_1_1996_11_30_USA_Cattle_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI
BJ_124_nsp13_VIPR_ALG4_AXX83300_1_20502_21398_1_2015_05_06_China_Unknown_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
3582_2006_nsp13_VIPR_ALG4_701216708_20597_21493_1_2006_09_China_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
8164_2009_nsp13_VIPR_ALG4_701216869_20597_21493_1_2009_03_China_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
3194A_2012_nsp13_VIPR_ALG4_701216757_20597_21493_1_2012_03_China_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
5345_2007_nsp13_VIPR_ALG4_701216659_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 AYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
*****************************************:***************:*
>OC43_human_USA_911_66_1991_nsp13_VIPR_ALG4_530802478_20592_21488_1_1991_01_29_USA_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >HCoV_OC43_Seattle_USA_SC9741_2016_nsp13_VIPR_ALG4_APU51939_1_20597_21493_1_2016_USA_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGTGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTTGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAATTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >CC_23_nsp13_VIPR_ALG4_AXX83324_1_20519_21415_1_2015_07_13_China_Unknown_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGATAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGTGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTTGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >TCG_7_nsp13_VIPR_ALG4_BBM61384_1_20568_21464_1_2008_01_Japan_Unknown_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCCCCTATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCGGTTACTTTGCCTACAGGTTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTCTGCACAAATGCAAACGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAAGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGACAGTTTGGTTAATCTAATC >IWT_24_nsp13_VIPR_ALG4_BBM61154_1_20571_21467_1_2017_01_Japan_Unknown_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCCCCTATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCGGTTACTTTGCCTACTGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTCTGCACAAATGCAAACGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAAGTTGAGATAGATGGAAGTGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGATAGTTTGGTTAATGTAATC >HCoV_OC43_Seattle_USA_SC2730_2015_nsp13_VIPR_ALG4_ARK08657_1_20565_21461_1_2015_USA_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGTGAGTACAATGTGAGTAAAGATGGTTTCTTTACATATATTTGTCATATGATTCGAGACAAGTTAGCTCTTGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAATTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >12689_2012_nsp13_VIPR_ALG4_701216729_20597_21493_1_2012_05_China_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGTGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTTGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAATTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >OC43_human_USA_913_29_1991_nsp13_VIPR_ALG4_530802368_20578_21474_1_1991_03_14_USA_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >DcCoV_HKU23_camel_Nigeria_NV1097_2015_nsp13_VIPR_ALG4_QEY10654_1_20585_21481_1_2015_11_12_Nigeria_Camel_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATACAAGTATTTGAATTCCCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCGGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGACATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTCATATGGTCCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTCTGCACAAATGCAAACGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTATTTGATATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGACAGTTTGGTTAATATAATC >IWT_15_nsp13_VIPR_ALG4_BBM61064_1_20567_21463_1_2016_01_Japan_Unknown_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCCCCTATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCTGTTACTTTGCCTACTGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTCTGCACAAATGCAAACGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAAGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGATAGTTTGGTTAATGTAATC >5370_2007_nsp13_VIPR_ALG4_701216764_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGTGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTTGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >TCG_12_nsp13_VIPR_ALG4_BBM61324_1_20570_21466_1_2008_12_Japan_Unknown_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCCCCTATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCGGTTACTTTGCCTACTGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTCTGCACAAATGCAAACGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAAGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGATAGTTTGGTTAATGTAATC >GZYF_26_nsp13_VIPR_ALG4_AXX83330_1_20522_21418_1_2015_05_21_China_Unknown_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCAGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGTGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTTGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAATTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >IWT_16_nsp13_VIPR_ALG4_BBM61114_1_20571_21467_1_2016_07_Japan_Unknown_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCCCCTATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCTGTTACTTTGCCTACTGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTCTGCACAAATGCAAACGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAAGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGATAGTTTGGTTAATGTAATC >DcCoV_HKU23_camel_Nigeria_NV1010_2015_nsp13_VIPR_ALG4_QEY10638_1_20580_21476_1_2015_11_20_Nigeria_Camel_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATACAAGTATTTGAATTCCCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTGCCTGTTAATATGCGAGTTTTGCATCTAGGTGCAGGTTCAGAAAAGGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGACATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTTATATGGTCCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAGGTTGAGATAGACGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTATTTGATATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGACAGTTTGGTTAATATAATC >R_AH65_TC_nsp13_VIPR_ALG4_145208926_20579_21475_1_NA_USA_Cattle_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATACAAGTATTTGAATTCCCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCGGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTCTGCACAAATGCAAACGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGACAGTTTGGTTAATGTAATC >MY_U1057_12_nsp13_VIPR_ALG4_AQN78749_1_20597_21493_1_2012_08_27_Malaysia_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGTGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTTGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAATTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >TCG_5_nsp13_VIPR_ALG4_BBM61264_1_20561_21457_1_2007_12_Japan_Unknown_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCCCCTATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCGGTTACTTTGCCTACTGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTCTGCACAAATGCAAACGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAAGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGACAGTTTGGTTAATGTAATC >DcCoV_HKU23_camel_Nigeria_NV1092_2015_nsp13_VIPR_ALG4_QEY10646_1_20593_21489_1_2015_11_23_Nigeria_Camel_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATACAAGTATTTGAATTCCCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTGCCTGTTAATATGCGAGTTTTGCATCTAGGTGCAGGTTCAGAAAAGGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGACATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTTATATGGTCCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAGGTTGAGATAGACGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTATTTGATATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGACAGTTTGGTTAATATAATC >IWT_23_nsp13_VIPR_ALG4_BBM61144_1_20561_21457_1_2016_12_Japan_Unknown_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCCCCTATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCGGTTACTTTGCCTACTGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTCTGCACAAATGCAAACGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAAGTTGAGATAGATGGAAGTGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGATAGTTTGGTTAATGTAATC >3074A_2012_nsp13_VIPR_ALG4_701216687_20597_21493_1_2012_02_China_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTGAGTAAAGACGGTTTCTTTACATATATTTGTCATATGATTCGAGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAAGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGATATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTTGTTGGTGACAGTTTGGTTAATGTAATC >5617_2007_nsp13_VIPR_ALG4_701216855_20597_21493_1_2007_07_China_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGTGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTTGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >IWT_3_nsp13_VIPR_ALG4_BBM60964_1_20571_21467_1_2011_06_Japan_Unknown_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCCCCTATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCGGTTACTTTGCCTACTGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTCTGCACAAATGCAAACGCTTCTTCTAGTGAAGGTTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAAGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGATAGTTTGGTTAATGTAATC >IWT_26_nsp13_VIPR_ALG4_BBM61174_1_20567_21463_1_2017_02_Japan_Unknown_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCCCCTATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCGGTTACTTTGCCTACTGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTCTGCACAAATGCAAACGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAAGTTGAGATAGATGGAAGTGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGATAGTTTGGTTAATGTAATC >E_DB2_TC_nsp13_VIPR_ALG4_251748077_20579_21475_1_1996_11_30_USA_Cattle_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATACAAGTATTTGAATTCCCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTGAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACCTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTAAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGCGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACGGTTTTCTGCACAAATGCAAACGCTTCTTCTAGTGAAGGGTTTTTAATTGGCATAAATTATTTGGGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGATATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTGTTAGAGATACAAATAAAGAAGTTTTTGTTGGTGACAGTTTGGTTAATGTAATC >BJ_124_nsp13_VIPR_ALG4_AXX83300_1_20502_21398_1_2015_05_06_China_Unknown_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCAGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGTGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTTGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAATTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >3582_2006_nsp13_VIPR_ALG4_701216708_20597_21493_1_2006_09_China_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGTGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTTGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >8164_2009_nsp13_VIPR_ALG4_701216869_20597_21493_1_2009_03_China_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGTGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTTGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCTACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC >3194A_2012_nsp13_VIPR_ALG4_701216757_20597_21493_1_2012_03_China_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGGGAGTACAATGTGAGTAAAGACGGTTTCTTTACATATATTTGTCATATGATTCGAGACAAGTTAGCTCTGGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGATATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTTGTTGGTGACAGTTTGGTTAATGTAATC >5345_2007_nsp13_VIPR_ALG4_701216659_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 GCTGCATCTGACTGGAAGCCTGGTTATTCTATGCCTGTATTATATAAGTATTTGAATTCTCCAATGGAAAGAGTTAGTCTCTGGAATTATGGGAAGCCAGTTACTTTGCCTACAGGCTGTATGATGAATGTTGCTAAGTATACTCAGTTATGTCAATATCTGAATACTACAACATTAGCTGTACCTGTTAATATGCGAGTTTTGCATTTAGGTGCAGGTTCAGAAAAAGGAGTAGCACCGGGTTCTGCAGTTCTTAGGCAGTGGTTGCCTGCTGGTACTATTCTTGTAGATAATGATTTATACCCATTTGTTAGTGACAGTGTCGCTACATATTTTGGGGATTGTATAACTTTACCCTTTGATTGTCAATGGGATTTGATAATTTCTGATATGTATGACCCTATTACTAAGAACATAGGTGAGTACAATGTGAGTAAAGATGGTTTCTTTACATACATTTGTCATATGATTCGAGACAAGTTAGCTCTTGGTGGCAGTGTTGCTATAAAAATAACAGAGTTTTCTTGGAATGCAGAATTATATAAGTTAATGGGGTATTTTGCATTTTGGACTGTGTTTTGCACAAATGCAAATGCTTCTTCTAGTGAAGGATTTTTAATTGGCATAAATTATTTGTGTAAGCCCAAGGTTGAGATAGATGGAAATGTTATGCATGCCAATTATTTGTTTTGGAGAAATTCCACAGTTTGGAACGGGGGTGCTTATAGCCTGTTTGACATGGCTAAATTCCCGCTTAAGTTGGCTGGTACTGCCGTAATAAATTTAAGAGCAGACCAGATTAATGATATGGTTTATTCCCTTCTTGAAAAGGGTAAACTACTTATTAGAGATACAAATAAAGAAGTTTTCGTTGGTGACAGTTTGGTTAATGTAATC
>OC43_human_USA_911_66_1991_nsp13_VIPR_ALG4_530802478_20592_21488_1_1991_01_29_USA_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >HCoV_OC43_Seattle_USA_SC9741_2016_nsp13_VIPR_ALG4_APU51939_1_20597_21493_1_2016_USA_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYNLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >CC_23_nsp13_VIPR_ALG4_AXX83324_1_20519_21415_1_2015_07_13_China_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >TCG_7_nsp13_VIPR_ALG4_BBM61384_1_20568_21464_1_2008_01_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNLI >IWT_24_nsp13_VIPR_ALG4_BBM61154_1_20571_21467_1_2017_01_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGSVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI >HCoV_OC43_Seattle_USA_SC2730_2015_nsp13_VIPR_ALG4_ARK08657_1_20565_21461_1_2015_USA_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYNLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >12689_2012_nsp13_VIPR_ALG4_701216729_20597_21493_1_2012_05_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYNLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >OC43_human_USA_913_29_1991_nsp13_VIPR_ALG4_530802368_20578_21474_1_1991_03_14_USA_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >DcCoV_HKU23_camel_Nigeria_NV1097_2015_nsp13_VIPR_ALG4_QEY10654_1_20585_21481_1_2015_11_12_Nigeria_Camel_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMVRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNII >IWT_15_nsp13_VIPR_ALG4_BBM61064_1_20567_21463_1_2016_01_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI >5370_2007_nsp13_VIPR_ALG4_701216764_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >TCG_12_nsp13_VIPR_ALG4_BBM61324_1_20570_21466_1_2008_12_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI >GZYF_26_nsp13_VIPR_ALG4_AXX83330_1_20522_21418_1_2015_05_21_China_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYNLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >IWT_16_nsp13_VIPR_ALG4_BBM61114_1_20571_21467_1_2016_07_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI >DcCoV_HKU23_camel_Nigeria_NV1010_2015_nsp13_VIPR_ALG4_QEY10638_1_20580_21476_1_2015_11_20_Nigeria_Camel_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICYMVRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNII >R_AH65_TC_nsp13_VIPR_ALG4_145208926_20579_21475_1_NA_USA_Cattle_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI >MY_U1057_12_nsp13_VIPR_ALG4_AQN78749_1_20597_21493_1_2012_08_27_Malaysia_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYNLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >TCG_5_nsp13_VIPR_ALG4_BBM61264_1_20561_21457_1_2007_12_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI >DcCoV_HKU23_camel_Nigeria_NV1092_2015_nsp13_VIPR_ALG4_QEY10646_1_20593_21489_1_2015_11_23_Nigeria_Camel_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICYMVRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNII >IWT_23_nsp13_VIPR_ALG4_BBM61144_1_20561_21457_1_2016_12_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGSVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI >3074A_2012_nsp13_VIPR_ALG4_701216687_20597_21493_1_2012_02_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >5617_2007_nsp13_VIPR_ALG4_701216855_20597_21493_1_2007_07_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >IWT_3_nsp13_VIPR_ALG4_BBM60964_1_20571_21467_1_2011_06_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI >IWT_26_nsp13_VIPR_ALG4_BBM61174_1_20567_21463_1_2017_02_Japan_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGSVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI >E_DB2_TC_nsp13_VIPR_ALG4_251748077_20579_21475_1_1996_11_30_USA_Cattle_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLGKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLVRDTNKEVFVGDSLVNVI >BJ_124_nsp13_VIPR_ALG4_AXX83300_1_20502_21398_1_2015_05_06_China_Unknown_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYNLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >3582_2006_nsp13_VIPR_ALG4_701216708_20597_21493_1_2006_09_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >8164_2009_nsp13_VIPR_ALG4_701216869_20597_21493_1_2009_03_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >3194A_2012_nsp13_VIPR_ALG4_701216757_20597_21493_1_2012_03_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI >5345_2007_nsp13_VIPR_ALG4_701216659_20597_21493_1_2007_05_China_Human_Betacoronavirus_1 AASDWKPGYSMPVLYKYLNSPMERVSLWNYGKPVTLPTGCMMNVAKYTQLCQYLNTTTLAVPVNMRVLHLGAGSEKGVAPGSAVLRQWLPAGTILVDNDLYPFVSDSVATYFGDCITLPFDCQWDLIISDMYDPITKNIGEYNVSKDGFFTYICHMIRDKLALGGSVAIKITEFSWNAELYKLMGYFAFWTVFCTNANASSSEGFLIGINYLCKPKVEIDGNVMHANYLFWRNSTVWNGGAYSLFDMAKFPLKLAGTAVINLRADQINDMVYSLLEKGKLLIRDTNKEVFVGDSLVNVI
Reading sequence file /data//pss_subsets/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp13_VIPR_ALG4_QEY10630_1_20585_21481_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result/original_alignment/codeml/fasta/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp13_VIPR_ALG4_QEY10630_1_20585_21481_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result.1
Found 30 sequences of length 897
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 1.5%
Found 37 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 3
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 27 polymorphic sites
**p-Value(s)**
----------
NSS: 3.30e-02 (1000 permutations)
Max Chi^2: 4.72e-01 (1000 permutations)
PHI (Permutation): 3.41e-01 (1000 permutations)
PHI (Normal): 2.51e-01
#NEXUS
[ID: 8805626454]
begin taxa;
dimensions ntax=30;
taxlabels
TCG_12_nsp13_VIPR_ALG4_BBM61324_1_20570_21466_1_2008_12_Japan_Unknown_Betacoronavirus_1
5370_2007_nsp13_VIPR_ALG4_701216764_20597_21493_1_2007_05_China_Human_Betacoronavirus_1
GZYF_26_nsp13_VIPR_ALG4_AXX83330_1_20522_21418_1_2015_05_21_China_Unknown_Betacoronavirus_1
MY_U1057_12_nsp13_VIPR_ALG4_AQN78749_1_20597_21493_1_2012_08_27_Malaysia_Human_Betacoronavirus_1
R_AH65_TC_nsp13_VIPR_ALG4_145208926_20579_21475_1_NA_USA_Cattle_Betacoronavirus_1
TCG_5_nsp13_VIPR_ALG4_BBM61264_1_20561_21457_1_2007_12_Japan_Unknown_Betacoronavirus_1
5617_2007_nsp13_VIPR_ALG4_701216855_20597_21493_1_2007_07_China_Human_Betacoronavirus_1
3074A_2012_nsp13_VIPR_ALG4_701216687_20597_21493_1_2012_02_China_Human_Betacoronavirus_1
3582_2006_nsp13_VIPR_ALG4_701216708_20597_21493_1_2006_09_China_Human_Betacoronavirus_1
BJ_124_nsp13_VIPR_ALG4_AXX83300_1_20502_21398_1_2015_05_06_China_Unknown_Betacoronavirus_1
TCG_7_nsp13_VIPR_ALG4_BBM61384_1_20568_21464_1_2008_01_Japan_Unknown_Betacoronavirus_1
5345_2007_nsp13_VIPR_ALG4_701216659_20597_21493_1_2007_05_China_Human_Betacoronavirus_1
OC43_human_USA_913_29_1991_nsp13_VIPR_ALG4_530802368_20578_21474_1_1991_03_14_USA_Human_Betacoronavirus_1
OC43_human_USA_911_66_1991_nsp13_VIPR_ALG4_530802478_20592_21488_1_1991_01_29_USA_Human_Betacoronavirus_1
CC_23_nsp13_VIPR_ALG4_AXX83324_1_20519_21415_1_2015_07_13_China_Unknown_Betacoronavirus_1
HCoV_OC43_Seattle_USA_SC9741_2016_nsp13_VIPR_ALG4_APU51939_1_20597_21493_1_2016_USA_Human_Betacoronavirus_1
HCoV_OC43_Seattle_USA_SC2730_2015_nsp13_VIPR_ALG4_ARK08657_1_20565_21461_1_2015_USA_Human_Betacoronavirus_1
IWT_24_nsp13_VIPR_ALG4_BBM61154_1_20571_21467_1_2017_01_Japan_Unknown_Betacoronavirus_1
12689_2012_nsp13_VIPR_ALG4_701216729_20597_21493_1_2012_05_China_Human_Betacoronavirus_1
IWT_15_nsp13_VIPR_ALG4_BBM61064_1_20567_21463_1_2016_01_Japan_Unknown_Betacoronavirus_1
IWT_16_nsp13_VIPR_ALG4_BBM61114_1_20571_21467_1_2016_07_Japan_Unknown_Betacoronavirus_1
DcCoV_HKU23_camel_Nigeria_NV1010_2015_nsp13_VIPR_ALG4_QEY10638_1_20580_21476_1_2015_11_20_Nigeria_Camel_Betacoronavirus_1
IWT_23_nsp13_VIPR_ALG4_BBM61144_1_20561_21457_1_2016_12_Japan_Unknown_Betacoronavirus_1
DcCoV_HKU23_camel_Nigeria_NV1092_2015_nsp13_VIPR_ALG4_QEY10646_1_20593_21489_1_2015_11_23_Nigeria_Camel_Betacoronavirus_1
E_DB2_TC_nsp13_VIPR_ALG4_251748077_20579_21475_1_1996_11_30_USA_Cattle_Betacoronavirus_1
IWT_3_nsp13_VIPR_ALG4_BBM60964_1_20571_21467_1_2011_06_Japan_Unknown_Betacoronavirus_1
IWT_26_nsp13_VIPR_ALG4_BBM61174_1_20567_21463_1_2017_02_Japan_Unknown_Betacoronavirus_1
DcCoV_HKU23_camel_Nigeria_NV1097_2015_nsp13_VIPR_ALG4_QEY10654_1_20585_21481_1_2015_11_12_Nigeria_Camel_Betacoronavirus_1
3194A_2012_nsp13_VIPR_ALG4_701216757_20597_21493_1_2012_03_China_Human_Betacoronavirus_1
8164_2009_nsp13_VIPR_ALG4_701216869_20597_21493_1_2009_03_China_Human_Betacoronavirus_1
;
end;
begin trees;
translate
1 TCG_12_nsp13_VIPR_ALG4_BBM61324_1_20570_21466_1_2008_12_Japan_Unknown_Betacoronavirus_1,
2 5370_2007_nsp13_VIPR_ALG4_701216764_20597_21493_1_2007_05_China_Human_Betacoronavirus_1,
3 GZYF_26_nsp13_VIPR_ALG4_AXX83330_1_20522_21418_1_2015_05_21_China_Unknown_Betacoronavirus_1,
4 MY_U1057_12_nsp13_VIPR_ALG4_AQN78749_1_20597_21493_1_2012_08_27_Malaysia_Human_Betacoronavirus_1,
5 R_AH65_TC_nsp13_VIPR_ALG4_145208926_20579_21475_1_NA_USA_Cattle_Betacoronavirus_1,
6 TCG_5_nsp13_VIPR_ALG4_BBM61264_1_20561_21457_1_2007_12_Japan_Unknown_Betacoronavirus_1,
7 5617_2007_nsp13_VIPR_ALG4_701216855_20597_21493_1_2007_07_China_Human_Betacoronavirus_1,
8 3074A_2012_nsp13_VIPR_ALG4_701216687_20597_21493_1_2012_02_China_Human_Betacoronavirus_1,
9 3582_2006_nsp13_VIPR_ALG4_701216708_20597_21493_1_2006_09_China_Human_Betacoronavirus_1,
10 BJ_124_nsp13_VIPR_ALG4_AXX83300_1_20502_21398_1_2015_05_06_China_Unknown_Betacoronavirus_1,
11 TCG_7_nsp13_VIPR_ALG4_BBM61384_1_20568_21464_1_2008_01_Japan_Unknown_Betacoronavirus_1,
12 5345_2007_nsp13_VIPR_ALG4_701216659_20597_21493_1_2007_05_China_Human_Betacoronavirus_1,
13 OC43_human_USA_913_29_1991_nsp13_VIPR_ALG4_530802368_20578_21474_1_1991_03_14_USA_Human_Betacoronavirus_1,
14 OC43_human_USA_911_66_1991_nsp13_VIPR_ALG4_530802478_20592_21488_1_1991_01_29_USA_Human_Betacoronavirus_1,
15 CC_23_nsp13_VIPR_ALG4_AXX83324_1_20519_21415_1_2015_07_13_China_Unknown_Betacoronavirus_1,
16 HCoV_OC43_Seattle_USA_SC9741_2016_nsp13_VIPR_ALG4_APU51939_1_20597_21493_1_2016_USA_Human_Betacoronavirus_1,
17 HCoV_OC43_Seattle_USA_SC2730_2015_nsp13_VIPR_ALG4_ARK08657_1_20565_21461_1_2015_USA_Human_Betacoronavirus_1,
18 IWT_24_nsp13_VIPR_ALG4_BBM61154_1_20571_21467_1_2017_01_Japan_Unknown_Betacoronavirus_1,
19 12689_2012_nsp13_VIPR_ALG4_701216729_20597_21493_1_2012_05_China_Human_Betacoronavirus_1,
20 IWT_15_nsp13_VIPR_ALG4_BBM61064_1_20567_21463_1_2016_01_Japan_Unknown_Betacoronavirus_1,
21 IWT_16_nsp13_VIPR_ALG4_BBM61114_1_20571_21467_1_2016_07_Japan_Unknown_Betacoronavirus_1,
22 DcCoV_HKU23_camel_Nigeria_NV1010_2015_nsp13_VIPR_ALG4_QEY10638_1_20580_21476_1_2015_11_20_Nigeria_Camel_Betacoronavirus_1,
23 IWT_23_nsp13_VIPR_ALG4_BBM61144_1_20561_21457_1_2016_12_Japan_Unknown_Betacoronavirus_1,
24 DcCoV_HKU23_camel_Nigeria_NV1092_2015_nsp13_VIPR_ALG4_QEY10646_1_20593_21489_1_2015_11_23_Nigeria_Camel_Betacoronavirus_1,
25 E_DB2_TC_nsp13_VIPR_ALG4_251748077_20579_21475_1_1996_11_30_USA_Cattle_Betacoronavirus_1,
26 IWT_3_nsp13_VIPR_ALG4_BBM60964_1_20571_21467_1_2011_06_Japan_Unknown_Betacoronavirus_1,
27 IWT_26_nsp13_VIPR_ALG4_BBM61174_1_20567_21463_1_2017_02_Japan_Unknown_Betacoronavirus_1,
28 DcCoV_HKU23_camel_Nigeria_NV1097_2015_nsp13_VIPR_ALG4_QEY10654_1_20585_21481_1_2015_11_12_Nigeria_Camel_Betacoronavirus_1,
29 3194A_2012_nsp13_VIPR_ALG4_701216757_20597_21493_1_2012_03_China_Human_Betacoronavirus_1,
30 8164_2009_nsp13_VIPR_ALG4_701216869_20597_21493_1_2009_03_China_Human_Betacoronavirus_1
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:4.907879e-04,26:1.215778e-03,(20:5.101287e-04,21:5.018013e-04)0.983:1.249680e-03,(((((((2:5.348900e-04,((3:5.075184e-04,10:5.095153e-04)0.994:1.242183e-03,4:5.300418e-04,16:5.220605e-04,17:1.235053e-03,19:5.305509e-04)0.954:1.264104e-03,7:5.006389e-04,9:5.123840e-04,12:5.345969e-04,15:1.206181e-03,30:1.227934e-03)0.999:1.976901e-03,13:5.344994e-04,14:5.061222e-04)0.654:1.520167e-03,(8:1.218397e-03,29:4.997975e-04)0.985:2.793752e-03)1.000:1.101500e-02,(((22:4.923264e-04,24:5.164937e-04)1.000:5.605113e-03,28:1.241807e-03)1.000:4.210595e-03,25:5.425858e-04)0.699:1.246209e-03)0.812:1.528744e-03,5:5.054480e-04)0.999:2.630928e-03,11:2.033692e-03)0.984:1.255622e-03,6:5.156763e-04)0.947:1.242582e-03,(18:5.131631e-04,23:5.184014e-04,27:4.991097e-04)0.921:1.213688e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:4.907879e-04,26:1.215778e-03,(20:5.101287e-04,21:5.018013e-04):1.249680e-03,(((((((2:5.348900e-04,((3:5.075184e-04,10:5.095153e-04):1.242183e-03,4:5.300418e-04,16:5.220605e-04,17:1.235053e-03,19:5.305509e-04):1.264104e-03,7:5.006389e-04,9:5.123840e-04,12:5.345969e-04,15:1.206181e-03,30:1.227934e-03):1.976901e-03,13:5.344994e-04,14:5.061222e-04):1.520167e-03,(8:1.218397e-03,29:4.997975e-04):2.793752e-03):1.101500e-02,(((22:4.923264e-04,24:5.164937e-04):5.605113e-03,28:1.241807e-03):4.210595e-03,25:5.425858e-04):1.246209e-03):1.528744e-03,5:5.054480e-04):2.630928e-03,11:2.033692e-03):1.255622e-03,6:5.156763e-04):1.242582e-03,(18:5.131631e-04,23:5.184014e-04,27:4.991097e-04):1.213688e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -1562.43 -1583.22
2 -1560.67 -1585.81
--------------------------------------
TOTAL -1561.21 -1585.19
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.081968 0.000288 0.050991 0.115880 0.080521 1254.98 1266.50 1.000
r(A<->C){all} 0.044003 0.000985 0.000118 0.104838 0.037015 453.83 483.51 1.000
r(A<->G){all} 0.216314 0.003716 0.105845 0.337906 0.212531 491.21 512.36 1.003
r(A<->T){all} 0.040485 0.000459 0.007798 0.085121 0.037011 558.39 661.13 1.000
r(C<->G){all} 0.055545 0.001574 0.000179 0.132064 0.046973 515.48 556.20 1.000
r(C<->T){all} 0.511383 0.006477 0.361200 0.663445 0.510013 526.58 541.90 1.003
r(G<->T){all} 0.132270 0.001928 0.051680 0.216773 0.127196 589.08 620.63 1.001
pi(A){all} 0.279546 0.000221 0.251625 0.309025 0.279353 1168.32 1270.70 1.000
pi(C){all} 0.140072 0.000127 0.118575 0.163144 0.139836 992.11 1196.68 1.000
pi(G){all} 0.225110 0.000183 0.199241 0.251011 0.224672 1224.54 1228.25 1.000
pi(T){all} 0.355272 0.000234 0.324683 0.384299 0.355153 1106.84 1174.64 1.000
alpha{1,2} 0.122639 0.031404 0.000016 0.338551 0.084037 1009.99 1011.89 1.000
alpha{3} 2.412144 1.915873 0.305567 5.199070 2.138361 1246.78 1257.22 1.001
pinvar{all} 0.772129 0.004821 0.637494 0.874974 0.782733 418.22 693.68 1.002
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp13_VIPR_ALG4_QEY10630_1_20585_21481_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 30 ls = 299
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 11 11 11 11 11 11 | Ser TCT 8 8 8 7 7 8 | Tyr TAT 14 14 14 14 14 15 | Cys TGT 6 6 6 5 5 6
TTC 3 3 3 3 3 3 | TCC 2 2 2 3 3 2 | TAC 3 3 3 3 3 2 | TGC 1 1 1 1 1 1
Leu TTA 11 11 11 11 11 11 | TCA 1 1 1 1 1 1 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 9 9 9 9 9 9 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 8 8 8 8 8 8
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 6 7 7 6 6 7 | Pro CCT 6 6 6 7 7 6 | His CAT 3 3 3 3 3 3 | Arg CGT 0 0 0 0 0 0
CTC 1 1 1 1 1 1 | CCC 2 2 2 2 2 2 | CAC 0 0 0 0 0 0 | CGC 0 0 0 1 1 0
CTA 1 1 1 2 1 1 | CCA 3 3 3 1 1 3 | Gln CAA 2 2 2 2 2 2 | CGA 2 2 2 1 1 2
CTG 3 2 2 3 3 2 | CCG 2 2 2 3 3 2 | CAG 3 3 3 3 3 3 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 8 8 8 7 7 8 | Thr ACT 8 8 8 6 7 8 | Asn AAT 18 19 18 17 16 19 | Ser AGT 7 7 7 7 8 7
ATC 1 1 1 1 1 1 | ACC 0 0 0 1 1 0 | AAC 2 2 2 3 3 2 | AGC 1 1 1 1 1 1
ATA 8 8 8 8 8 8 | ACA 9 9 9 9 8 9 | Lys AAA 6 6 6 7 7 6 | Arg AGA 4 4 4 4 4 4
Met ATG 11 11 11 11 11 11 | ACG 0 0 0 1 1 0 | AAG 11 10 11 10 10 10 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 15 15 15 16 16 15 | Ala GCT 11 11 11 11 11 11 | Asp GAT 10 10 11 10 11 10 | Gly GGT 11 12 12 13 12 12
GTC 1 1 1 1 1 1 | GCC 2 2 2 2 2 2 | GAC 7 7 6 7 6 7 | GGC 3 3 3 2 3 3
GTA 6 6 6 6 7 6 | GCA 8 8 8 8 8 8 | Glu GAA 6 6 6 6 6 6 | GGA 3 3 3 2 2 3
GTG 2 2 2 1 1 2 | GCG 0 0 0 0 0 0 | GAG 3 3 3 3 3 3 | GGG 5 4 4 6 6 4
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 11 11 11 11 11 11 | Ser TCT 8 8 7 7 8 7 | Tyr TAT 14 14 13 14 14 14 | Cys TGT 6 6 5 5 6 5
TTC 3 3 3 3 3 3 | TCC 2 2 3 3 2 3 | TAC 3 3 4 3 3 3 | TGC 1 1 1 1 1 1
Leu TTA 11 11 11 11 11 11 | TCA 1 1 0 1 1 1 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 9 9 9 9 9 9 | TCG 0 0 1 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 8 8 8 8 8 8
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 7 6 6 6 7 6 | Pro CCT 6 6 6 8 6 7 | His CAT 3 3 3 3 3 3 | Arg CGT 0 0 0 0 0 0
CTC 1 1 1 1 1 1 | CCC 2 2 2 2 2 2 | CAC 0 0 0 0 0 0 | CGC 0 0 1 1 0 1
CTA 1 1 2 1 1 1 | CCA 3 3 3 1 3 1 | Gln CAA 2 2 2 2 2 2 | CGA 2 2 1 1 2 1
CTG 2 3 2 3 2 3 | CCG 2 2 2 2 2 3 | CAG 3 3 3 3 3 3 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 8 8 6 7 8 7 | Thr ACT 8 8 6 7 8 7 | Asn AAT 19 18 17 17 18 17 | Ser AGT 7 7 7 7 7 7
ATC 1 1 1 1 1 1 | ACC 0 0 1 1 0 1 | AAC 2 2 3 3 2 3 | AGC 1 1 1 1 1 1
ATA 8 8 9 8 8 8 | ACA 9 9 9 8 9 8 | Lys AAA 6 6 6 7 6 7 | Arg AGA 4 4 4 4 4 4
Met ATG 11 11 11 11 11 11 | ACG 0 0 1 1 0 1 | AAG 10 11 11 10 11 10 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 15 15 16 16 15 16 | Ala GCT 11 11 11 11 11 11 | Asp GAT 10 10 10 11 10 11 | Gly GGT 12 11 12 12 12 12
GTC 1 1 2 1 1 1 | GCC 2 2 2 2 2 2 | GAC 7 7 7 6 7 6 | GGC 3 3 3 3 3 3
GTA 6 6 6 7 6 7 | GCA 8 8 8 8 8 8 | Glu GAA 6 6 6 6 6 6 | GGA 3 3 2 2 3 2
GTG 2 2 1 1 2 1 | GCG 0 0 0 0 0 0 | GAG 3 3 3 3 3 3 | GGG 4 5 6 6 4 6
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 11 11 12 11 11 11 | Ser TCT 7 7 7 7 8 7 | Tyr TAT 14 14 14 13 14 14 | Cys TGT 6 5 5 5 6 5
TTC 3 3 2 3 3 3 | TCC 2 3 3 3 2 3 | TAC 3 3 4 4 3 3 | TGC 1 1 1 1 1 1
Leu TTA 11 11 10 11 11 11 | TCA 2 1 1 1 1 1 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 9 9 9 9 9 9 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 8 8 8 8 8 8
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 7 6 6 6 7 6 | Pro CCT 6 8 6 6 6 7 | His CAT 3 3 2 3 3 3 | Arg CGT 0 0 0 0 0 0
CTC 1 1 1 1 1 1 | CCC 2 2 2 2 2 2 | CAC 0 0 0 0 0 0 | CGC 0 1 1 1 0 1
CTA 1 1 3 1 1 1 | CCA 3 1 3 2 3 1 | Gln CAA 2 2 2 2 2 2 | CGA 2 1 1 1 2 1
CTG 2 3 2 3 2 3 | CCG 2 2 2 3 2 3 | CAG 3 3 3 3 3 3 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 8 7 6 7 8 7 | Thr ACT 8 7 6 6 8 7 | Asn AAT 19 17 18 17 19 17 | Ser AGT 7 7 7 7 7 7
ATC 1 1 1 1 1 1 | ACC 0 1 1 1 0 1 | AAC 2 3 2 3 2 3 | AGC 1 1 1 1 1 1
ATA 8 8 9 8 8 8 | ACA 9 8 9 9 9 8 | Lys AAA 6 7 5 6 6 7 | Arg AGA 4 4 4 4 4 4
Met ATG 11 11 11 11 11 11 | ACG 0 1 1 1 0 1 | AAG 10 10 12 11 10 10 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 15 16 16 16 15 16 | Ala GCT 11 11 11 11 11 11 | Asp GAT 10 11 9 10 10 10 | Gly GGT 12 12 12 12 12 12
GTC 1 1 2 1 1 1 | GCC 2 2 2 2 2 2 | GAC 7 6 8 7 7 7 | GGC 3 3 3 3 3 3
GTA 6 7 5 7 6 7 | GCA 8 8 8 8 8 8 | Glu GAA 6 6 6 6 6 6 | GGA 3 2 2 2 3 2
GTG 2 1 2 1 2 1 | GCG 0 0 0 0 0 0 | GAG 3 3 3 3 3 3 | GGG 4 6 6 6 4 6
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 12 11 12 11 11 11 | Ser TCT 7 7 8 8 7 7 | Tyr TAT 14 14 15 14 14 14 | Cys TGT 5 5 6 6 5 5
TTC 2 3 2 3 3 3 | TCC 3 3 2 2 3 3 | TAC 4 3 2 3 3 3 | TGC 1 1 1 1 1 1
Leu TTA 10 11 11 11 11 11 | TCA 1 1 1 1 1 1 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 9 9 9 9 9 9 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 8 8 8 8 8 8
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 6 6 6 7 6 6 | Pro CCT 6 7 6 6 7 7 | His CAT 2 3 3 3 3 3 | Arg CGT 0 0 0 0 0 0
CTC 1 1 1 1 1 1 | CCC 2 2 2 2 2 2 | CAC 0 0 0 0 0 0 | CGC 1 1 0 0 1 1
CTA 3 1 1 1 1 1 | CCA 3 1 3 3 1 1 | Gln CAA 2 2 2 2 2 2 | CGA 1 1 2 2 1 1
CTG 2 3 3 2 3 3 | CCG 2 3 2 2 3 3 | CAG 3 3 3 3 3 3 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 6 7 8 8 7 7 | Thr ACT 6 7 8 8 7 7 | Asn AAT 18 16 18 18 17 16 | Ser AGT 7 8 7 7 7 8
ATC 1 1 1 1 1 1 | ACC 1 1 0 0 1 1 | AAC 2 3 2 2 3 3 | AGC 1 1 1 1 1 1
ATA 9 8 8 8 8 8 | ACA 9 8 9 9 8 8 | Lys AAA 5 7 7 6 7 7 | Arg AGA 4 4 4 4 4 4
Met ATG 11 11 11 11 11 11 | ACG 1 1 0 0 1 1 | AAG 12 10 10 11 10 10 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 16 16 15 15 16 16 | Ala GCT 11 11 11 11 11 11 | Asp GAT 9 11 10 10 11 11 | Gly GGT 12 12 11 12 13 12
GTC 2 1 1 1 1 1 | GCC 2 2 2 2 2 2 | GAC 8 6 7 7 6 6 | GGC 3 3 3 3 3 3
GTA 5 7 6 6 7 7 | GCA 8 8 8 8 8 8 | Glu GAA 6 6 6 6 6 6 | GGA 2 2 3 3 2 2
GTG 2 1 2 2 1 1 | GCG 0 0 0 0 0 0 | GAG 3 3 3 3 3 3 | GGG 6 6 5 4 5 6
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 11 11 11 11 12 11 | Ser TCT 7 7 8 9 8 8 | Tyr TAT 13 14 14 14 15 14 | Cys TGT 5 6 6 6 6 6
TTC 3 3 3 3 2 3 | TCC 3 2 2 1 2 2 | TAC 4 3 3 3 2 3 | TGC 1 1 1 1 1 1
Leu TTA 11 11 11 11 11 11 | TCA 1 2 1 1 1 1 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 9 9 9 9 9 9 | TCG 0 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 8 8 8 8 8 8
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 6 7 7 7 6 7 | Pro CCT 6 6 6 6 6 6 | His CAT 3 3 3 3 3 3 | Arg CGT 0 0 0 0 0 0
CTC 1 1 1 1 1 1 | CCC 2 2 2 2 2 2 | CAC 0 0 0 0 0 0 | CGC 1 0 0 0 0 0
CTA 1 1 1 1 1 1 | CCA 3 3 3 3 3 3 | Gln CAA 2 2 2 2 2 2 | CGA 1 2 2 2 2 2
CTG 3 2 2 2 3 2 | CCG 2 2 2 2 2 2 | CAG 3 3 3 3 3 3 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 7 8 8 8 8 8 | Thr ACT 6 8 8 8 8 8 | Asn AAT 17 19 18 18 18 18 | Ser AGT 7 7 7 7 7 7
ATC 1 1 1 1 1 1 | ACC 1 0 0 0 0 0 | AAC 3 2 2 2 2 2 | AGC 1 1 1 1 1 1
ATA 8 8 8 8 8 8 | ACA 9 9 9 9 9 9 | Lys AAA 6 6 6 6 6 6 | Arg AGA 4 4 4 4 4 4
Met ATG 11 11 11 11 11 11 | ACG 1 0 0 0 0 0 | AAG 11 10 11 11 11 11 | AGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 16 15 15 15 15 15 | Ala GCT 11 11 11 11 11 11 | Asp GAT 11 10 10 10 10 10 | Gly GGT 12 12 12 12 11 12
GTC 1 1 1 1 1 1 | GCC 2 2 2 2 2 2 | GAC 6 7 7 7 7 7 | GGC 3 3 3 3 3 3
GTA 7 6 6 6 6 6 | GCA 8 8 8 8 8 8 | Glu GAA 6 6 6 6 6 6 | GGA 2 3 3 3 3 3
GTG 1 2 2 2 2 2 | GCG 0 0 0 0 0 0 | GAG 3 3 3 3 3 3 | GGG 6 4 4 4 5 4
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C197
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.47492 C:0.09699 A:0.23411 G:0.19398
Average T:0.35229 C:0.13935 A:0.28205 G:0.22631
#2: C98
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48495 C:0.09699 A:0.23411 G:0.18395
Average T:0.35563 C:0.13935 A:0.28205 G:0.22297
#3: C65
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48495 C:0.09365 A:0.23411 G:0.18729
Average T:0.35563 C:0.13824 A:0.28205 G:0.22408
#4: C273
position 1: T:0.25418 C:0.11706 A:0.31438 G:0.31438
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.46823 C:0.10702 A:0.22742 G:0.19732
Average T:0.34894 C:0.14381 A:0.27871 G:0.22854
#5: C132
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29097 G:0.17726
position 3: T:0.47157 C:0.10702 A:0.22408 G:0.19732
Average T:0.35006 C:0.14270 A:0.27648 G:0.23077
#6: C88
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48829 C:0.09365 A:0.23411 G:0.18395
Average T:0.35674 C:0.13824 A:0.28205 G:0.22297
#7: C5
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48495 C:0.09699 A:0.23411 G:0.18395
Average T:0.35563 C:0.13935 A:0.28205 G:0.22297
#8: C202
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.47492 C:0.09699 A:0.23411 G:0.19398
Average T:0.35229 C:0.13935 A:0.28205 G:0.22631
#9: C70
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.45485 C:0.11706 A:0.23077 G:0.19732
Average T:0.34448 C:0.14604 A:0.27982 G:0.22965
#10: C122
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.47492 C:0.10702 A:0.22408 G:0.19398
Average T:0.35117 C:0.14270 A:0.27759 G:0.22854
#11: C34
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48161 C:0.09699 A:0.23411 G:0.18729
Average T:0.35452 C:0.13935 A:0.28205 G:0.22408
#12: C243
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.47157 C:0.10702 A:0.22408 G:0.19732
Average T:0.35006 C:0.14270 A:0.27759 G:0.22965
#13: C78
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48161 C:0.09699 A:0.23746 G:0.18395
Average T:0.35452 C:0.13935 A:0.28317 G:0.22297
#14: C121
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.47492 C:0.10702 A:0.22408 G:0.19398
Average T:0.35117 C:0.14270 A:0.27759 G:0.22854
#15: C69
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.45819 C:0.11371 A:0.22742 G:0.20067
Average T:0.34560 C:0.14493 A:0.27871 G:0.23077
#16: C234
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.45819 C:0.11371 A:0.22742 G:0.20067
Average T:0.34560 C:0.14493 A:0.27871 G:0.23077
#17: C156
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48495 C:0.09699 A:0.23411 G:0.18395
Average T:0.35563 C:0.13935 A:0.28205 G:0.22297
#18: C267
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.46823 C:0.11037 A:0.22408 G:0.19732
Average T:0.34894 C:0.14381 A:0.27759 G:0.22965
#19: C71
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.45819 C:0.11371 A:0.22742 G:0.20067
Average T:0.34560 C:0.14493 A:0.27871 G:0.23077
#20: C130
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29097 G:0.17726
position 3: T:0.47157 C:0.10702 A:0.22408 G:0.19732
Average T:0.35006 C:0.14270 A:0.27648 G:0.23077
#21: C19
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48161 C:0.09030 A:0.23746 G:0.19064
Average T:0.35452 C:0.13712 A:0.28317 G:0.22520
#22: C46
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48161 C:0.09699 A:0.23411 G:0.18729
Average T:0.35452 C:0.13935 A:0.28205 G:0.22408
#23: C135
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.47492 C:0.10702 A:0.22408 G:0.19398
Average T:0.35117 C:0.14270 A:0.27759 G:0.22854
#24: C134
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29097 G:0.17726
position 3: T:0.47157 C:0.10702 A:0.22408 G:0.19732
Average T:0.35006 C:0.14270 A:0.27648 G:0.23077
#25: C76
position 1: T:0.25418 C:0.11371 A:0.31438 G:0.31773
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.46154 C:0.11037 A:0.23077 G:0.19732
Average T:0.34671 C:0.14381 A:0.27982 G:0.22965
#26: C60
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48161 C:0.09699 A:0.23746 G:0.18395
Average T:0.35452 C:0.13935 A:0.28317 G:0.22297
#27: C22
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48161 C:0.09699 A:0.23411 G:0.18729
Average T:0.35452 C:0.13935 A:0.28205 G:0.22408
#28: C49
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48495 C:0.09365 A:0.23411 G:0.18729
Average T:0.35563 C:0.13824 A:0.28205 G:0.22408
#29: C21
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48161 C:0.09030 A:0.23411 G:0.19398
Average T:0.35452 C:0.13712 A:0.28205 G:0.22631
#30: C29
position 1: T:0.25753 C:0.11371 A:0.31773 G:0.31104
position 2: T:0.32441 C:0.20736 A:0.29431 G:0.17391
position 3: T:0.48161 C:0.09699 A:0.23411 G:0.18729
Average T:0.35452 C:0.13935 A:0.28205 G:0.22408
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 334 | Ser S TCT 225 | Tyr Y TAT 420 | Cys C TGT 166
TTC 86 | TCC 73 | TAC 92 | TGC 30
Leu L TTA 328 | TCA 31 | *** * TAA 0 | *** * TGA 0
TTG 270 | TCG 1 | TAG 0 | Trp W TGG 240
------------------------------------------------------------------------------
Leu L CTT 192 | Pro P CCT 191 | His H CAT 88 | Arg R CGT 0
CTC 30 | CCC 60 | CAC 0 | CGC 14
CTA 36 | CCA 71 | Gln Q CAA 60 | CGA 46
CTG 75 | CCG 68 | CAG 90 | CGG 0
------------------------------------------------------------------------------
Ile I ATT 223 | Thr T ACT 220 | Asn N AAT 531 | Ser S AGT 213
ATC 30 | ACC 14 | AAC 72 | AGC 30
ATA 243 | ACA 262 | Lys K AAA 188 | Arg R AGA 120
Met M ATG 330 | ACG 14 | AAG 316 | AGG 30
------------------------------------------------------------------------------
Val V GTT 464 | Ala A GCT 330 | Asp D GAT 307 | Gly G GGT 358
GTC 33 | GCC 60 | GAC 203 | GGC 89
GTA 188 | GCA 240 | Glu E GAA 180 | GGA 76
GTG 48 | GCG 0 | GAG 90 | GGG 151
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.25596 C:0.11382 A:0.31616 G:0.31405
position 2: T:0.32441 C:0.20736 A:0.29398 G:0.17425
position 3: T:0.47514 C:0.10212 A:0.23066 G:0.19208
Average T:0.35184 C:0.14110 A:0.28027 G:0.22679
Model 1: NearlyNeutral (2 categories)
TREE # 1: (12, 23, (10, 14), (((((((11, ((13, 26), 17, 2, 6, 7), 22, 27, 30, 3, 28), 8, 1), (21, 29)), (((15, 19), 9), 25)), 16), 4), 18), (5, 20, 24)); MP score: 49
check convergence..
lnL(ntime: 45 np: 48): -1474.627791 +0.000000
31..12 31..23 31..32 32..10 32..14 31..33 33..34 34..35 35..36 36..37 37..38 38..39 39..11 39..40 40..41 41..13 41..26 40..17 40..2 40..6 40..7 39..22 39..27 39..30 39..3 39..28 38..8 38..1 37..42 42..21 42..29 36..43 43..44 44..45 45..15 45..19 44..9 43..25 35..16 34..4 33..18 31..46 46..5 46..20 46..24
0.000004 0.003550 0.003546 0.000004 0.000004 0.003533 0.003547 0.010598 0.003797 0.049287 0.003125 0.007202 0.000004 0.003597 0.003587 0.000004 0.000004 0.000004 0.000004 0.003592 0.000004 0.000004 0.000004 0.000004 0.003600 0.003596 0.000004 0.000004 0.011379 0.003608 0.000004 0.003230 0.017994 0.025117 0.000004 0.000004 0.003339 0.000004 0.000004 0.007145 0.000004 0.003545 0.000004 0.000004 0.000004 3.379858 0.979681 0.024206
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.181606
(12: 0.000004, 23: 0.003550, (10: 0.000004, 14: 0.000004): 0.003546, (((((((11: 0.000004, ((13: 0.000004, 26: 0.000004): 0.003587, 17: 0.000004, 2: 0.000004, 6: 0.003592, 7: 0.000004): 0.003597, 22: 0.000004, 27: 0.000004, 30: 0.000004, 3: 0.003600, 28: 0.003596): 0.007202, 8: 0.000004, 1: 0.000004): 0.003125, (21: 0.003608, 29: 0.000004): 0.011379): 0.049287, (((15: 0.000004, 19: 0.000004): 0.025117, 9: 0.003339): 0.017994, 25: 0.000004): 0.003230): 0.003797, 16: 0.000004): 0.010598, 4: 0.007145): 0.003547, 18: 0.000004): 0.003533, (5: 0.000004, 20: 0.000004, 24: 0.000004): 0.003545);
(C243: 0.000004, C135: 0.003550, (C122: 0.000004, C121: 0.000004): 0.003546, (((((((C34: 0.000004, ((C78: 0.000004, C60: 0.000004): 0.003587, C156: 0.000004, C98: 0.000004, C88: 0.003592, C5: 0.000004): 0.003597, C46: 0.000004, C22: 0.000004, C29: 0.000004, C65: 0.003600, C49: 0.003596): 0.007202, C202: 0.000004, C197: 0.000004): 0.003125, (C19: 0.003608, C21: 0.000004): 0.011379): 0.049287, (((C69: 0.000004, C71: 0.000004): 0.025117, C70: 0.003339): 0.017994, C76: 0.000004): 0.003230): 0.003797, C234: 0.000004): 0.010598, C273: 0.007145): 0.003547, C267: 0.000004): 0.003533, (C132: 0.000004, C130: 0.000004, C134: 0.000004): 0.003545);
Detailed output identifying parameters
kappa (ts/tv) = 3.37986
MLEs of dN/dS (w) for site classes (K=2)
p: 0.97968 0.02032
w: 0.02421 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
31..23 0.004 721.3 175.7 0.0440 0.0002 0.0051 0.2 0.9
31..32 0.004 721.3 175.7 0.0440 0.0002 0.0051 0.2 0.9
32..10 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
32..14 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
31..33 0.004 721.3 175.7 0.0440 0.0002 0.0051 0.2 0.9
33..34 0.004 721.3 175.7 0.0440 0.0002 0.0051 0.2 0.9
34..35 0.011 721.3 175.7 0.0440 0.0007 0.0153 0.5 2.7
35..36 0.004 721.3 175.7 0.0440 0.0002 0.0055 0.2 1.0
36..37 0.049 721.3 175.7 0.0440 0.0031 0.0710 2.3 12.5
37..38 0.003 721.3 175.7 0.0440 0.0002 0.0045 0.1 0.8
38..39 0.007 721.3 175.7 0.0440 0.0005 0.0104 0.3 1.8
39..11 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
39..40 0.004 721.3 175.7 0.0440 0.0002 0.0052 0.2 0.9
40..41 0.004 721.3 175.7 0.0440 0.0002 0.0052 0.2 0.9
41..13 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
41..26 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
40..17 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
40..2 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
40..6 0.004 721.3 175.7 0.0440 0.0002 0.0052 0.2 0.9
40..7 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
39..22 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
39..27 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
39..30 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
39..3 0.004 721.3 175.7 0.0440 0.0002 0.0052 0.2 0.9
39..28 0.004 721.3 175.7 0.0440 0.0002 0.0052 0.2 0.9
38..8 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
38..1 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
37..42 0.011 721.3 175.7 0.0440 0.0007 0.0164 0.5 2.9
42..21 0.004 721.3 175.7 0.0440 0.0002 0.0052 0.2 0.9
42..29 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
36..43 0.003 721.3 175.7 0.0440 0.0002 0.0047 0.1 0.8
43..44 0.018 721.3 175.7 0.0440 0.0011 0.0259 0.8 4.6
44..45 0.025 721.3 175.7 0.0440 0.0016 0.0362 1.1 6.4
45..15 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
45..19 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
44..9 0.003 721.3 175.7 0.0440 0.0002 0.0048 0.2 0.8
43..25 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
35..16 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
34..4 0.007 721.3 175.7 0.0440 0.0005 0.0103 0.3 1.8
33..18 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
31..46 0.004 721.3 175.7 0.0440 0.0002 0.0051 0.2 0.9
46..5 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
46..20 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
46..24 0.000 721.3 175.7 0.0440 0.0000 0.0000 0.0 0.0
Time used: 3:20
Model 2: PositiveSelection (3 categories)
TREE # 1: (12, 23, (10, 14), (((((((11, ((13, 26), 17, 2, 6, 7), 22, 27, 30, 3, 28), 8, 1), (21, 29)), (((15, 19), 9), 25)), 16), 4), 18), (5, 20, 24)); MP score: 49
check convergence..
lnL(ntime: 45 np: 50): -1474.625386 +0.000000
31..12 31..23 31..32 32..10 32..14 31..33 33..34 34..35 35..36 36..37 37..38 38..39 39..11 39..40 40..41 41..13 41..26 40..17 40..2 40..6 40..7 39..22 39..27 39..30 39..3 39..28 38..8 38..1 37..42 42..21 42..29 36..43 43..44 44..45 45..15 45..19 44..9 43..25 35..16 34..4 33..18 31..46 46..5 46..20 46..24
0.000004 0.003555 0.003551 0.000004 0.000004 0.003539 0.003554 0.010616 0.003802 0.049374 0.003130 0.007213 0.000004 0.003602 0.003592 0.000004 0.000004 0.000004 0.000004 0.003597 0.000004 0.000004 0.000004 0.000004 0.003605 0.003602 0.000004 0.000004 0.011396 0.003613 0.000004 0.003235 0.018005 0.025130 0.000004 0.000004 0.003345 0.000004 0.000004 0.007164 0.000004 0.003550 0.000004 0.000004 0.000004 3.377313 0.986376 0.000000 0.027006 1.313824
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.181862
(12: 0.000004, 23: 0.003555, (10: 0.000004, 14: 0.000004): 0.003551, (((((((11: 0.000004, ((13: 0.000004, 26: 0.000004): 0.003592, 17: 0.000004, 2: 0.000004, 6: 0.003597, 7: 0.000004): 0.003602, 22: 0.000004, 27: 0.000004, 30: 0.000004, 3: 0.003605, 28: 0.003602): 0.007213, 8: 0.000004, 1: 0.000004): 0.003130, (21: 0.003613, 29: 0.000004): 0.011396): 0.049374, (((15: 0.000004, 19: 0.000004): 0.025130, 9: 0.003345): 0.018005, 25: 0.000004): 0.003235): 0.003802, 16: 0.000004): 0.010616, 4: 0.007164): 0.003554, 18: 0.000004): 0.003539, (5: 0.000004, 20: 0.000004, 24: 0.000004): 0.003550);
(C243: 0.000004, C135: 0.003555, (C122: 0.000004, C121: 0.000004): 0.003551, (((((((C34: 0.000004, ((C78: 0.000004, C60: 0.000004): 0.003592, C156: 0.000004, C98: 0.000004, C88: 0.003597, C5: 0.000004): 0.003602, C46: 0.000004, C22: 0.000004, C29: 0.000004, C65: 0.003605, C49: 0.003602): 0.007213, C202: 0.000004, C197: 0.000004): 0.003130, (C19: 0.003613, C21: 0.000004): 0.011396): 0.049374, (((C69: 0.000004, C71: 0.000004): 0.025130, C70: 0.003345): 0.018005, C76: 0.000004): 0.003235): 0.003802, C234: 0.000004): 0.010616, C273: 0.007164): 0.003554, C267: 0.000004): 0.003539, (C132: 0.000004, C130: 0.000004, C134: 0.000004): 0.003550);
Detailed output identifying parameters
kappa (ts/tv) = 3.37731
MLEs of dN/dS (w) for site classes (K=3)
p: 0.98638 0.00000 0.01362
w: 0.02701 1.00000 1.31382
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
31..23 0.004 721.3 175.7 0.0445 0.0002 0.0051 0.2 0.9
31..32 0.004 721.3 175.7 0.0445 0.0002 0.0051 0.2 0.9
32..10 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
32..14 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
31..33 0.004 721.3 175.7 0.0445 0.0002 0.0051 0.2 0.9
33..34 0.004 721.3 175.7 0.0445 0.0002 0.0051 0.2 0.9
34..35 0.011 721.3 175.7 0.0445 0.0007 0.0153 0.5 2.7
35..36 0.004 721.3 175.7 0.0445 0.0002 0.0055 0.2 1.0
36..37 0.049 721.3 175.7 0.0445 0.0032 0.0710 2.3 12.5
37..38 0.003 721.3 175.7 0.0445 0.0002 0.0045 0.1 0.8
38..39 0.007 721.3 175.7 0.0445 0.0005 0.0104 0.3 1.8
39..11 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
39..40 0.004 721.3 175.7 0.0445 0.0002 0.0052 0.2 0.9
40..41 0.004 721.3 175.7 0.0445 0.0002 0.0052 0.2 0.9
41..13 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
41..26 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
40..17 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
40..2 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
40..6 0.004 721.3 175.7 0.0445 0.0002 0.0052 0.2 0.9
40..7 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
39..22 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
39..27 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
39..30 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
39..3 0.004 721.3 175.7 0.0445 0.0002 0.0052 0.2 0.9
39..28 0.004 721.3 175.7 0.0445 0.0002 0.0052 0.2 0.9
38..8 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
38..1 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
37..42 0.011 721.3 175.7 0.0445 0.0007 0.0164 0.5 2.9
42..21 0.004 721.3 175.7 0.0445 0.0002 0.0052 0.2 0.9
42..29 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
36..43 0.003 721.3 175.7 0.0445 0.0002 0.0047 0.1 0.8
43..44 0.018 721.3 175.7 0.0445 0.0012 0.0259 0.8 4.6
44..45 0.025 721.3 175.7 0.0445 0.0016 0.0362 1.2 6.4
45..15 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
45..19 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
44..9 0.003 721.3 175.7 0.0445 0.0002 0.0048 0.2 0.8
43..25 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
35..16 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
34..4 0.007 721.3 175.7 0.0445 0.0005 0.0103 0.3 1.8
33..18 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
31..46 0.004 721.3 175.7 0.0445 0.0002 0.0051 0.2 0.9
46..5 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
46..20 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
46..24 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C197)
Pr(w>1) post mean +- SE for w
298 V 0.945 1.244
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C197)
Pr(w>1) post mean +- SE for w
298 V 0.648 1.684 +- 1.192
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.733 0.155 0.052 0.023 0.013 0.008 0.006 0.004 0.003 0.003
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
sum of density on p0-p1 = 1.000000
Time used: 11:33
Model 7: beta (10 categories)
TREE # 1: (12, 23, (10, 14), (((((((11, ((13, 26), 17, 2, 6, 7), 22, 27, 30, 3, 28), 8, 1), (21, 29)), (((15, 19), 9), 25)), 16), 4), 18), (5, 20, 24)); MP score: 49
lnL(ntime: 45 np: 48): -1474.647618 +0.000000
31..12 31..23 31..32 32..10 32..14 31..33 33..34 34..35 35..36 36..37 37..38 38..39 39..11 39..40 40..41 41..13 41..26 40..17 40..2 40..6 40..7 39..22 39..27 39..30 39..3 39..28 38..8 38..1 37..42 42..21 42..29 36..43 43..44 44..45 45..15 45..19 44..9 43..25 35..16 34..4 33..18 31..46 46..5 46..20 46..24
0.000004 0.003538 0.003534 0.000004 0.000004 0.003522 0.003532 0.010558 0.003785 0.049094 0.003117 0.007179 0.000004 0.003585 0.003575 0.000004 0.000004 0.000004 0.000004 0.003580 0.000004 0.000004 0.000004 0.000004 0.003588 0.003585 0.000004 0.000004 0.011340 0.003596 0.000004 0.003220 0.017965 0.025089 0.000004 0.000004 0.003326 0.000004 0.000004 0.007106 0.000004 0.003534 0.000004 0.000004 0.000004 3.386858 0.046381 0.871485
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.181037
(12: 0.000004, 23: 0.003538, (10: 0.000004, 14: 0.000004): 0.003534, (((((((11: 0.000004, ((13: 0.000004, 26: 0.000004): 0.003575, 17: 0.000004, 2: 0.000004, 6: 0.003580, 7: 0.000004): 0.003585, 22: 0.000004, 27: 0.000004, 30: 0.000004, 3: 0.003588, 28: 0.003585): 0.007179, 8: 0.000004, 1: 0.000004): 0.003117, (21: 0.003596, 29: 0.000004): 0.011340): 0.049094, (((15: 0.000004, 19: 0.000004): 0.025089, 9: 0.003326): 0.017965, 25: 0.000004): 0.003220): 0.003785, 16: 0.000004): 0.010558, 4: 0.007106): 0.003532, 18: 0.000004): 0.003522, (5: 0.000004, 20: 0.000004, 24: 0.000004): 0.003534);
(C243: 0.000004, C135: 0.003538, (C122: 0.000004, C121: 0.000004): 0.003534, (((((((C34: 0.000004, ((C78: 0.000004, C60: 0.000004): 0.003575, C156: 0.000004, C98: 0.000004, C88: 0.003580, C5: 0.000004): 0.003585, C46: 0.000004, C22: 0.000004, C29: 0.000004, C65: 0.003588, C49: 0.003585): 0.007179, C202: 0.000004, C197: 0.000004): 0.003117, (C19: 0.003596, C21: 0.000004): 0.011340): 0.049094, (((C69: 0.000004, C71: 0.000004): 0.025089, C70: 0.003326): 0.017965, C76: 0.000004): 0.003220): 0.003785, C234: 0.000004): 0.010558, C273: 0.007106): 0.003532, C267: 0.000004): 0.003522, (C132: 0.000004, C130: 0.000004, C134: 0.000004): 0.003534);
Detailed output identifying parameters
kappa (ts/tv) = 3.38686
Parameters in M7 (beta):
p = 0.04638 q = 0.87149
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00012 0.00254 0.03751 0.39248
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
31..23 0.004 721.3 175.7 0.0433 0.0002 0.0051 0.2 0.9
31..32 0.004 721.3 175.7 0.0433 0.0002 0.0051 0.2 0.9
32..10 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
32..14 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
31..33 0.004 721.3 175.7 0.0433 0.0002 0.0051 0.2 0.9
33..34 0.004 721.3 175.7 0.0433 0.0002 0.0051 0.2 0.9
34..35 0.011 721.3 175.7 0.0433 0.0007 0.0153 0.5 2.7
35..36 0.004 721.3 175.7 0.0433 0.0002 0.0055 0.2 1.0
36..37 0.049 721.3 175.7 0.0433 0.0031 0.0709 2.2 12.5
37..38 0.003 721.3 175.7 0.0433 0.0002 0.0045 0.1 0.8
38..39 0.007 721.3 175.7 0.0433 0.0004 0.0104 0.3 1.8
39..11 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
39..40 0.004 721.3 175.7 0.0433 0.0002 0.0052 0.2 0.9
40..41 0.004 721.3 175.7 0.0433 0.0002 0.0052 0.2 0.9
41..13 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
41..26 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
40..17 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
40..2 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
40..6 0.004 721.3 175.7 0.0433 0.0002 0.0052 0.2 0.9
40..7 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
39..22 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
39..27 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
39..30 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
39..3 0.004 721.3 175.7 0.0433 0.0002 0.0052 0.2 0.9
39..28 0.004 721.3 175.7 0.0433 0.0002 0.0052 0.2 0.9
38..8 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
38..1 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
37..42 0.011 721.3 175.7 0.0433 0.0007 0.0164 0.5 2.9
42..21 0.004 721.3 175.7 0.0433 0.0002 0.0052 0.2 0.9
42..29 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
36..43 0.003 721.3 175.7 0.0433 0.0002 0.0047 0.1 0.8
43..44 0.018 721.3 175.7 0.0433 0.0011 0.0260 0.8 4.6
44..45 0.025 721.3 175.7 0.0433 0.0016 0.0363 1.1 6.4
45..15 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
45..19 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
44..9 0.003 721.3 175.7 0.0433 0.0002 0.0048 0.1 0.8
43..25 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
35..16 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
34..4 0.007 721.3 175.7 0.0433 0.0004 0.0103 0.3 1.8
33..18 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
31..46 0.004 721.3 175.7 0.0433 0.0002 0.0051 0.2 0.9
46..5 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
46..20 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
46..24 0.000 721.3 175.7 0.0433 0.0000 0.0000 0.0 0.0
Time used: 31:59
Model 8: beta&w>1 (11 categories)
TREE # 1: (12, 23, (10, 14), (((((((11, ((13, 26), 17, 2, 6, 7), 22, 27, 30, 3, 28), 8, 1), (21, 29)), (((15, 19), 9), 25)), 16), 4), 18), (5, 20, 24)); MP score: 49
check convergence..
lnL(ntime: 45 np: 50): -1474.626133 +0.000000
31..12 31..23 31..32 32..10 32..14 31..33 33..34 34..35 35..36 36..37 37..38 38..39 39..11 39..40 40..41 41..13 41..26 40..17 40..2 40..6 40..7 39..22 39..27 39..30 39..3 39..28 38..8 38..1 37..42 42..21 42..29 36..43 43..44 44..45 45..15 45..19 44..9 43..25 35..16 34..4 33..18 31..46 46..5 46..20 46..24
0.000004 0.003555 0.003550 0.000004 0.000004 0.003538 0.003554 0.010615 0.003802 0.049368 0.003130 0.007212 0.000004 0.003601 0.003592 0.000004 0.000004 0.000004 0.000004 0.003596 0.000004 0.000004 0.000004 0.000004 0.003605 0.003601 0.000004 0.000004 0.011394 0.003613 0.000004 0.003235 0.018004 0.025129 0.000004 0.000004 0.003345 0.000004 0.000004 0.007163 0.000004 0.003550 0.000004 0.000004 0.000004 3.377314 0.986689 2.818352 98.999979 1.318562
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.181843
(12: 0.000004, 23: 0.003555, (10: 0.000004, 14: 0.000004): 0.003550, (((((((11: 0.000004, ((13: 0.000004, 26: 0.000004): 0.003592, 17: 0.000004, 2: 0.000004, 6: 0.003596, 7: 0.000004): 0.003601, 22: 0.000004, 27: 0.000004, 30: 0.000004, 3: 0.003605, 28: 0.003601): 0.007212, 8: 0.000004, 1: 0.000004): 0.003130, (21: 0.003613, 29: 0.000004): 0.011394): 0.049368, (((15: 0.000004, 19: 0.000004): 0.025129, 9: 0.003345): 0.018004, 25: 0.000004): 0.003235): 0.003802, 16: 0.000004): 0.010615, 4: 0.007163): 0.003554, 18: 0.000004): 0.003538, (5: 0.000004, 20: 0.000004, 24: 0.000004): 0.003550);
(C243: 0.000004, C135: 0.003555, (C122: 0.000004, C121: 0.000004): 0.003550, (((((((C34: 0.000004, ((C78: 0.000004, C60: 0.000004): 0.003592, C156: 0.000004, C98: 0.000004, C88: 0.003596, C5: 0.000004): 0.003601, C46: 0.000004, C22: 0.000004, C29: 0.000004, C65: 0.003605, C49: 0.003601): 0.007212, C202: 0.000004, C197: 0.000004): 0.003130, (C19: 0.003613, C21: 0.000004): 0.011394): 0.049368, (((C69: 0.000004, C71: 0.000004): 0.025129, C70: 0.003345): 0.018004, C76: 0.000004): 0.003235): 0.003802, C234: 0.000004): 0.010615, C273: 0.007163): 0.003554, C267: 0.000004): 0.003538, (C132: 0.000004, C130: 0.000004, C134: 0.000004): 0.003550);
Detailed output identifying parameters
kappa (ts/tv) = 3.37731
Parameters in M8 (beta&w>1):
p0 = 0.98669 p = 2.81835 q = 98.99998
(p1 = 0.01331) w = 1.31856
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09867 0.09867 0.09867 0.09867 0.09867 0.09867 0.09867 0.09867 0.09867 0.09867 0.01331
w: 0.00724 0.01201 0.01573 0.01923 0.02278 0.02661 0.03098 0.03637 0.04388 0.05850 1.31856
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
31..23 0.004 721.3 175.7 0.0445 0.0002 0.0051 0.2 0.9
31..32 0.004 721.3 175.7 0.0445 0.0002 0.0051 0.2 0.9
32..10 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
32..14 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
31..33 0.004 721.3 175.7 0.0445 0.0002 0.0051 0.2 0.9
33..34 0.004 721.3 175.7 0.0445 0.0002 0.0051 0.2 0.9
34..35 0.011 721.3 175.7 0.0445 0.0007 0.0153 0.5 2.7
35..36 0.004 721.3 175.7 0.0445 0.0002 0.0055 0.2 1.0
36..37 0.049 721.3 175.7 0.0445 0.0032 0.0710 2.3 12.5
37..38 0.003 721.3 175.7 0.0445 0.0002 0.0045 0.1 0.8
38..39 0.007 721.3 175.7 0.0445 0.0005 0.0104 0.3 1.8
39..11 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
39..40 0.004 721.3 175.7 0.0445 0.0002 0.0052 0.2 0.9
40..41 0.004 721.3 175.7 0.0445 0.0002 0.0052 0.2 0.9
41..13 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
41..26 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
40..17 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
40..2 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
40..6 0.004 721.3 175.7 0.0445 0.0002 0.0052 0.2 0.9
40..7 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
39..22 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
39..27 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
39..30 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
39..3 0.004 721.3 175.7 0.0445 0.0002 0.0052 0.2 0.9
39..28 0.004 721.3 175.7 0.0445 0.0002 0.0052 0.2 0.9
38..8 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
38..1 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
37..42 0.011 721.3 175.7 0.0445 0.0007 0.0164 0.5 2.9
42..21 0.004 721.3 175.7 0.0445 0.0002 0.0052 0.2 0.9
42..29 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
36..43 0.003 721.3 175.7 0.0445 0.0002 0.0047 0.1 0.8
43..44 0.018 721.3 175.7 0.0445 0.0012 0.0259 0.8 4.6
44..45 0.025 721.3 175.7 0.0445 0.0016 0.0362 1.2 6.4
45..15 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
45..19 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
44..9 0.003 721.3 175.7 0.0445 0.0002 0.0048 0.2 0.8
43..25 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
35..16 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
34..4 0.007 721.3 175.7 0.0445 0.0005 0.0103 0.3 1.8
33..18 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
31..46 0.004 721.3 175.7 0.0445 0.0002 0.0051 0.2 0.9
46..5 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
46..20 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
46..24 0.000 721.3 175.7 0.0445 0.0000 0.0000 0.0 0.0
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C197)
Pr(w>1) post mean +- SE for w
298 V 0.928 1.227
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C197)
Pr(w>1) post mean +- SE for w
298 V 0.763 1.389 +- 0.729
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.000 0.003 0.018 0.060 0.146 0.286 0.486
ws: 0.894 0.080 0.015 0.005 0.002 0.001 0.001 0.000 0.000 0.000
Time used: 1:20:00
Model 1: NearlyNeutral -1474.627791 Model 2: PositiveSelection -1474.625386 Model 7: beta -1474.647618 Model 8: beta&w>1 -1474.626133 Model 2 vs 1 .004810 Model 8 vs 7 .042970
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
