--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -508.35 -531.69
2 -508.08 -525.92
--------------------------------------
TOTAL -508.20 -531.00
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.092590 0.000687 0.047170 0.144311 0.088900 957.53 1097.06 1.000
r(A<->C){all} 0.045888 0.001760 0.000034 0.131895 0.034063 227.99 277.12 1.003
r(A<->G){all} 0.229276 0.008145 0.079351 0.417785 0.222075 144.23 162.31 1.020
r(A<->T){all} 0.025033 0.000535 0.000001 0.072533 0.018439 330.80 345.05 1.002
r(C<->G){all} 0.052183 0.002486 0.000057 0.154903 0.037670 119.42 157.28 1.000
r(C<->T){all} 0.496660 0.010543 0.303939 0.698713 0.496124 157.98 203.58 1.016
r(G<->T){all} 0.150960 0.004221 0.035035 0.271394 0.141802 153.18 239.17 1.000
pi(A){all} 0.249317 0.000675 0.199352 0.300352 0.248996 970.40 1032.22 1.000
pi(C){all} 0.169709 0.000496 0.124062 0.211144 0.168874 995.31 1015.44 1.000
pi(G){all} 0.214737 0.000603 0.165392 0.260688 0.214759 814.99 966.88 1.000
pi(T){all} 0.366237 0.000833 0.308105 0.420555 0.365867 841.46 943.00 1.000
alpha{1,2} 0.696756 0.699799 0.000909 2.381770 0.381485 587.18 701.98 1.000
alpha{3} 1.305145 1.157877 0.000146 3.363833 1.022485 705.12 861.01 1.000
pinvar{all} 0.433981 0.047284 0.009650 0.765273 0.452479 362.63 367.44 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -467.358663
Model 2: PositiveSelection -466.982371
Model 7: beta -467.404546
Model 8: beta&w>1 -466.987494
Model 2 vs 1 .752584
Model 8 vs 7 .834104
-- Starting log on Fri Nov 18 14:40:18 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result--
-- Starting log on Fri Nov 18 14:58:02 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result--
-- Starting log on Sat Nov 19 03:42:54 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result/gapped_alignment/codeml,DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 30 taxa and 267 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C212
Taxon 2 -> C5
Taxon 3 -> C59
Taxon 4 -> C4
Taxon 5 -> C187
Taxon 6 -> C213
Taxon 7 -> C262
Taxon 8 -> C27
Taxon 9 -> C39
Taxon 10 -> C51
Taxon 11 -> C215
Taxon 12 -> C67
Taxon 13 -> C278
Taxon 14 -> C154
Taxon 15 -> C179
Taxon 16 -> C182
Taxon 17 -> C136
Taxon 18 -> C16
Taxon 19 -> C192
Taxon 20 -> C3
Taxon 21 -> C220
Taxon 22 -> C223
Taxon 23 -> C247
Taxon 24 -> C248
Taxon 25 -> C251
Taxon 26 -> C261
Taxon 27 -> C263
Taxon 28 -> C73
Taxon 29 -> C48
Taxon 30 -> C84
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668829376
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 2057865686
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 8934325802
Seed = 958348112
Swapseed = 1668829376
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 8 unique site patterns
Division 2 has 5 unique site patterns
Division 3 has 16 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -925.631629 -- 82.122948
Chain 2 -- -970.505509 -- 82.122948
Chain 3 -- -929.301515 -- 82.122948
Chain 4 -- -992.053720 -- 82.122948
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -966.981033 -- 82.122948
Chain 2 -- -972.008217 -- 82.122948
Chain 3 -- -967.706452 -- 82.122948
Chain 4 -- -972.629083 -- 82.122948
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-925.632] (-970.506) (-929.302) (-992.054) * [-966.981] (-972.008) (-967.706) (-972.629)
1000 -- (-566.127) (-577.682) [-544.346] (-561.519) * [-543.321] (-541.732) (-574.926) (-555.542) -- 0:16:39
2000 -- (-541.861) [-529.597] (-535.242) (-519.759) * [-533.766] (-530.398) (-553.273) (-539.973) -- 0:08:19
3000 -- [-521.193] (-531.541) (-536.316) (-526.403) * (-528.414) (-528.084) (-545.407) [-524.710] -- 0:11:04
4000 -- (-520.271) [-526.168] (-530.437) (-521.187) * [-524.751] (-544.629) (-532.401) (-521.952) -- 0:08:18
5000 -- [-516.627] (-534.848) (-545.826) (-522.791) * (-529.834) (-530.889) (-553.832) [-518.890] -- 0:09:57
Average standard deviation of split frequencies: 0.082048
6000 -- (-519.036) [-518.990] (-580.167) (-520.879) * (-545.381) (-514.930) (-560.234) [-520.609] -- 0:08:17
7000 -- (-519.174) (-520.531) (-564.057) [-522.532] * (-567.324) [-529.215] (-564.058) (-526.008) -- 0:07:05
8000 -- [-513.483] (-523.549) (-563.531) (-518.398) * (-559.137) (-515.523) (-555.207) [-522.646] -- 0:08:16
9000 -- (-517.786) (-541.520) (-566.272) [-523.067] * (-553.940) (-516.727) (-562.096) [-518.255] -- 0:07:20
10000 -- (-509.784) [-515.748] (-559.694) (-535.310) * (-558.218) (-523.702) (-550.677) [-519.978] -- 0:08:15
Average standard deviation of split frequencies: 0.084151
11000 -- [-511.621] (-529.500) (-558.760) (-540.250) * (-557.817) [-523.137] (-553.386) (-521.344) -- 0:07:29
12000 -- [-511.482] (-527.013) (-560.633) (-533.292) * (-555.879) (-526.620) (-564.338) [-509.889] -- 0:06:51
13000 -- (-518.899) [-515.096] (-555.553) (-561.535) * (-543.604) (-529.704) (-558.063) [-513.427] -- 0:07:35
14000 -- (-520.286) [-517.946] (-551.313) (-557.850) * (-538.753) (-517.760) (-548.741) [-511.937] -- 0:07:02
15000 -- (-520.835) [-517.092] (-544.045) (-549.872) * (-557.955) [-517.305] (-554.437) (-522.331) -- 0:07:39
Average standard deviation of split frequencies: 0.073330
16000 -- (-519.379) [-509.634] (-558.849) (-548.267) * (-543.692) (-520.032) (-554.071) [-513.387] -- 0:07:10
17000 -- [-517.474] (-520.554) (-549.401) (-571.699) * (-556.497) [-521.786] (-555.893) (-516.686) -- 0:07:42
18000 -- [-518.378] (-520.091) (-555.829) (-557.791) * (-557.990) (-518.555) (-548.675) [-509.837] -- 0:07:16
19000 -- [-527.627] (-518.767) (-557.227) (-557.382) * (-543.866) (-530.023) (-551.929) [-511.674] -- 0:06:53
20000 -- (-514.758) [-514.703] (-548.804) (-557.676) * (-540.505) [-516.458] (-550.368) (-522.161) -- 0:07:21
Average standard deviation of split frequencies: 0.074316
21000 -- (-528.462) [-516.074] (-546.935) (-548.788) * (-542.992) (-521.951) (-559.683) [-516.173] -- 0:06:59
22000 -- (-524.792) [-514.297] (-543.662) (-554.440) * (-553.517) (-524.883) (-565.704) [-510.999] -- 0:07:24
23000 -- (-531.184) [-512.496] (-540.842) (-548.552) * (-550.611) (-526.962) (-552.597) [-521.384] -- 0:07:04
24000 -- [-521.617] (-518.017) (-554.991) (-558.390) * (-547.477) [-511.727] (-539.866) (-524.540) -- 0:07:27
25000 -- (-527.775) [-513.125] (-556.415) (-551.434) * (-548.051) (-519.078) (-543.785) [-522.635] -- 0:07:09
Average standard deviation of split frequencies: 0.061882
26000 -- [-525.105] (-539.404) (-545.653) (-546.895) * (-553.199) [-513.181] (-548.029) (-522.148) -- 0:06:52
27000 -- [-519.972] (-516.417) (-544.621) (-564.355) * (-554.065) (-524.405) (-545.011) [-528.524] -- 0:07:12
28000 -- (-523.459) [-521.914] (-550.229) (-550.324) * (-543.524) [-509.700] (-544.208) (-523.422) -- 0:06:56
29000 -- (-527.203) [-515.295] (-550.519) (-551.214) * (-550.064) (-516.232) (-551.039) [-520.975] -- 0:07:15
30000 -- [-518.420] (-512.355) (-542.617) (-552.100) * (-556.453) (-514.660) (-548.123) [-521.003] -- 0:07:00
Average standard deviation of split frequencies: 0.059950
31000 -- [-518.860] (-520.065) (-555.747) (-561.218) * (-553.167) (-509.086) (-545.360) [-510.314] -- 0:06:46
32000 -- [-521.296] (-523.371) (-567.306) (-552.648) * (-543.067) [-513.368] (-546.001) (-514.407) -- 0:07:03
33000 -- (-514.552) [-522.229] (-555.254) (-551.738) * (-555.130) [-511.113] (-547.459) (-517.955) -- 0:06:50
34000 -- [-520.846] (-526.349) (-550.971) (-550.590) * (-552.279) (-524.929) (-564.016) [-515.448] -- 0:07:06
35000 -- [-521.019] (-522.122) (-562.492) (-561.949) * (-550.282) (-524.543) (-546.363) [-517.434] -- 0:06:53
Average standard deviation of split frequencies: 0.054490
36000 -- [-514.682] (-518.542) (-562.367) (-553.751) * (-545.148) [-514.229] (-552.829) (-525.695) -- 0:06:41
37000 -- [-508.650] (-532.449) (-549.720) (-546.785) * (-551.245) [-510.498] (-549.601) (-510.750) -- 0:06:56
38000 -- (-509.960) [-517.024] (-552.792) (-556.959) * (-547.706) (-514.549) (-546.144) [-517.136] -- 0:06:45
39000 -- [-511.192] (-519.509) (-548.950) (-551.522) * (-556.945) (-517.380) (-565.419) [-518.085] -- 0:06:58
40000 -- (-527.931) [-518.774] (-568.676) (-560.340) * (-552.821) [-508.938] (-557.732) (-522.320) -- 0:06:48
Average standard deviation of split frequencies: 0.062418
41000 -- (-528.955) [-510.972] (-563.758) (-554.204) * (-547.415) [-524.742] (-558.302) (-521.521) -- 0:06:37
42000 -- (-537.413) [-514.027] (-547.251) (-542.848) * (-556.452) (-512.549) (-555.257) [-519.626] -- 0:06:50
43000 -- (-520.214) [-515.062] (-550.042) (-549.430) * (-549.255) [-509.013] (-552.632) (-523.880) -- 0:06:40
44000 -- [-514.384] (-520.406) (-560.229) (-553.790) * (-541.030) (-514.459) (-552.560) [-523.923] -- 0:06:52
45000 -- (-517.433) [-511.304] (-548.468) (-551.871) * (-548.227) (-516.450) (-547.256) [-511.470] -- 0:06:43
Average standard deviation of split frequencies: 0.057047
46000 -- [-512.903] (-513.056) (-548.543) (-556.541) * (-550.668) [-524.301] (-549.980) (-512.450) -- 0:06:54
47000 -- (-516.239) [-514.865] (-547.665) (-552.511) * (-548.198) [-518.295] (-555.327) (-513.257) -- 0:06:45
48000 -- [-515.988] (-524.146) (-542.938) (-554.995) * (-564.971) [-514.952] (-557.402) (-524.981) -- 0:06:36
49000 -- (-519.780) [-517.779] (-548.179) (-560.606) * (-553.623) [-515.328] (-546.760) (-516.186) -- 0:06:47
50000 -- [-523.459] (-519.861) (-545.008) (-572.093) * (-540.934) (-516.267) (-540.168) [-517.479] -- 0:06:39
Average standard deviation of split frequencies: 0.052937
51000 -- (-530.038) [-514.979] (-545.866) (-555.755) * (-547.864) [-520.226] (-549.589) (-525.599) -- 0:06:49
52000 -- (-522.782) [-510.480] (-558.349) (-567.053) * (-554.821) [-517.314] (-544.762) (-520.383) -- 0:06:41
53000 -- (-532.230) [-516.268] (-546.333) (-564.929) * (-549.281) [-517.555] (-548.735) (-530.792) -- 0:06:50
54000 -- (-523.661) [-515.306] (-552.373) (-567.731) * (-544.158) [-508.533] (-559.103) (-518.325) -- 0:06:42
55000 -- [-520.471] (-514.264) (-552.819) (-577.052) * (-545.474) [-514.328] (-551.486) (-519.301) -- 0:06:35
Average standard deviation of split frequencies: 0.052450
56000 -- (-517.744) [-510.236] (-543.167) (-561.187) * (-561.726) [-518.827] (-549.268) (-519.126) -- 0:06:44
57000 -- (-515.501) [-509.643] (-552.622) (-555.066) * (-549.958) [-524.445] (-545.429) (-527.782) -- 0:06:37
58000 -- (-524.597) [-514.183] (-557.755) (-565.203) * (-541.866) [-515.402] (-548.647) (-526.794) -- 0:06:46
59000 -- [-513.962] (-523.124) (-545.946) (-569.495) * (-547.596) [-510.546] (-542.235) (-527.593) -- 0:06:38
60000 -- [-512.565] (-525.127) (-552.232) (-563.994) * (-552.728) [-519.181] (-546.657) (-526.958) -- 0:06:31
Average standard deviation of split frequencies: 0.047866
61000 -- (-516.133) [-520.481] (-554.602) (-565.442) * (-547.130) (-519.409) (-548.562) [-513.582] -- 0:06:40
62000 -- (-515.675) [-518.952] (-548.942) (-547.626) * (-551.285) [-512.242] (-553.571) (-521.949) -- 0:06:33
63000 -- (-512.318) [-520.612] (-546.626) (-541.506) * (-543.749) (-516.614) (-554.783) [-510.596] -- 0:06:41
64000 -- [-512.640] (-529.006) (-553.644) (-550.094) * (-547.014) [-523.019] (-543.997) (-518.501) -- 0:06:34
65000 -- [-509.517] (-523.053) (-546.151) (-550.432) * (-548.147) (-520.358) (-549.924) [-519.084] -- 0:06:42
Average standard deviation of split frequencies: 0.041242
66000 -- [-514.765] (-528.475) (-549.892) (-552.690) * (-545.519) [-519.054] (-559.346) (-522.639) -- 0:06:36
67000 -- [-510.145] (-536.301) (-547.089) (-552.157) * (-549.195) (-516.275) (-554.762) [-513.512] -- 0:06:29
68000 -- [-510.540] (-515.447) (-539.960) (-562.482) * (-541.120) (-512.399) (-544.594) [-514.885] -- 0:06:37
69000 -- [-512.585] (-523.847) (-551.840) (-555.565) * (-544.507) (-519.238) (-561.242) [-507.324] -- 0:06:31
70000 -- [-510.103] (-514.381) (-543.334) (-553.748) * (-557.818) (-517.437) (-551.328) [-509.848] -- 0:06:38
Average standard deviation of split frequencies: 0.039255
71000 -- [-517.946] (-527.677) (-547.075) (-557.326) * (-549.502) (-518.446) (-545.552) [-510.525] -- 0:06:32
72000 -- [-517.504] (-522.530) (-540.647) (-555.220) * (-544.515) (-511.855) (-548.327) [-512.487] -- 0:06:26
73000 -- [-517.425] (-516.167) (-562.084) (-558.750) * (-550.336) (-523.629) (-559.907) [-504.598] -- 0:06:33
74000 -- [-515.795] (-524.578) (-564.359) (-554.811) * (-543.272) (-519.721) (-563.277) [-517.070] -- 0:06:27
75000 -- [-514.418] (-520.758) (-549.991) (-568.210) * (-543.627) (-510.165) (-552.894) [-515.212] -- 0:06:34
Average standard deviation of split frequencies: 0.038834
76000 -- [-512.502] (-511.553) (-553.582) (-555.954) * (-553.835) (-516.101) (-547.524) [-522.762] -- 0:06:29
77000 -- [-511.544] (-511.475) (-548.348) (-562.420) * (-539.858) (-526.253) (-546.163) [-515.523] -- 0:06:23
78000 -- [-509.985] (-515.269) (-539.129) (-559.617) * (-543.368) [-510.158] (-563.042) (-522.671) -- 0:06:30
79000 -- [-517.458] (-517.795) (-545.265) (-550.411) * (-546.086) [-514.950] (-551.466) (-514.165) -- 0:06:24
80000 -- [-513.478] (-519.580) (-554.999) (-548.492) * (-547.234) [-509.572] (-543.055) (-522.434) -- 0:06:31
Average standard deviation of split frequencies: 0.036391
81000 -- [-517.267] (-527.433) (-553.028) (-555.424) * (-539.280) [-517.665] (-548.706) (-514.544) -- 0:06:25
82000 -- [-518.100] (-513.496) (-549.872) (-558.046) * (-550.594) [-511.492] (-552.953) (-534.328) -- 0:06:31
83000 -- (-515.047) [-507.393] (-550.601) (-547.047) * (-540.968) [-521.485] (-550.574) (-523.623) -- 0:06:26
84000 -- (-518.352) [-513.514] (-549.450) (-558.908) * (-546.170) [-525.263] (-554.628) (-521.363) -- 0:06:21
85000 -- (-519.862) [-512.120] (-542.276) (-558.760) * (-550.483) (-516.804) (-556.811) [-517.096] -- 0:06:27
Average standard deviation of split frequencies: 0.037316
86000 -- [-510.398] (-519.171) (-544.984) (-562.129) * (-557.661) [-511.605] (-555.040) (-515.135) -- 0:06:22
87000 -- (-521.505) [-519.010] (-557.567) (-555.656) * (-546.971) [-515.662] (-557.644) (-510.962) -- 0:06:28
88000 -- [-520.487] (-526.124) (-557.887) (-547.317) * (-540.461) [-506.847] (-545.947) (-519.300) -- 0:06:23
89000 -- [-515.263] (-516.759) (-549.218) (-559.559) * (-545.690) (-521.235) (-549.890) [-517.980] -- 0:06:18
90000 -- [-519.092] (-522.878) (-553.274) (-563.863) * (-546.659) (-527.061) (-553.891) [-515.651] -- 0:06:24
Average standard deviation of split frequencies: 0.039468
91000 -- [-516.339] (-516.348) (-551.135) (-560.355) * (-552.410) (-519.284) (-542.091) [-515.846] -- 0:06:19
92000 -- [-517.758] (-512.958) (-561.389) (-552.251) * (-548.866) [-521.579] (-567.559) (-526.608) -- 0:06:24
93000 -- (-520.469) [-511.763] (-566.544) (-552.485) * (-548.852) [-515.150] (-554.582) (-520.203) -- 0:06:20
94000 -- (-510.223) [-517.644] (-548.732) (-553.766) * (-553.618) [-518.187] (-551.019) (-528.947) -- 0:06:15
95000 -- (-521.039) [-522.155] (-555.759) (-558.230) * (-539.525) [-519.818] (-558.094) (-518.166) -- 0:06:21
Average standard deviation of split frequencies: 0.036699
96000 -- [-508.769] (-516.096) (-558.293) (-555.766) * (-550.100) (-525.958) (-543.349) [-509.849] -- 0:06:16
97000 -- [-512.426] (-528.652) (-563.755) (-560.893) * (-556.911) [-521.365] (-546.628) (-515.967) -- 0:06:21
98000 -- [-524.383] (-517.826) (-546.312) (-566.286) * (-536.688) (-512.025) (-554.773) [-513.682] -- 0:06:17
99000 -- [-516.174] (-513.317) (-553.970) (-561.544) * (-544.607) (-528.560) (-553.646) [-512.626] -- 0:06:22
100000 -- (-514.667) [-515.013] (-550.633) (-560.752) * (-542.956) (-525.048) (-547.686) [-514.504] -- 0:06:18
Average standard deviation of split frequencies: 0.029474
101000 -- (-520.246) [-508.964] (-550.704) (-563.531) * (-539.685) [-517.121] (-550.750) (-522.885) -- 0:06:13
102000 -- (-524.248) [-508.137] (-565.056) (-552.417) * (-546.460) [-518.994] (-545.283) (-519.871) -- 0:06:18
103000 -- (-522.101) [-514.774] (-556.812) (-560.150) * (-541.759) [-511.765] (-553.644) (-519.130) -- 0:06:14
104000 -- [-517.004] (-524.968) (-544.664) (-555.354) * (-550.460) [-510.547] (-546.619) (-520.325) -- 0:06:19
105000 -- [-510.478] (-511.743) (-558.657) (-558.184) * (-542.765) [-507.580] (-545.701) (-515.412) -- 0:06:15
Average standard deviation of split frequencies: 0.031737
106000 -- [-510.856] (-516.082) (-544.188) (-559.555) * (-541.273) (-515.638) (-547.759) [-519.657] -- 0:06:11
107000 -- [-512.745] (-517.233) (-541.182) (-554.574) * (-555.441) [-504.963] (-553.638) (-525.412) -- 0:06:15
108000 -- (-524.165) [-517.275] (-545.026) (-565.931) * (-549.837) (-514.898) (-555.844) [-522.969] -- 0:06:11
109000 -- (-526.178) [-511.062] (-559.516) (-566.966) * (-535.609) (-536.903) (-546.588) [-515.559] -- 0:06:16
110000 -- (-529.088) [-513.753] (-548.727) (-560.335) * (-539.859) [-518.204] (-555.982) (-516.688) -- 0:06:12
Average standard deviation of split frequencies: 0.031948
111000 -- (-525.596) [-510.940] (-550.679) (-567.764) * (-544.639) [-513.260] (-564.178) (-514.090) -- 0:06:08
112000 -- (-517.308) [-513.788] (-551.195) (-564.988) * (-563.738) [-516.824] (-564.559) (-520.554) -- 0:06:12
113000 -- [-521.280] (-517.662) (-553.800) (-575.407) * (-546.450) (-519.844) (-544.151) [-515.704] -- 0:06:08
114000 -- (-521.703) [-514.218] (-548.719) (-571.063) * (-553.530) [-517.610] (-545.298) (-520.960) -- 0:06:13
115000 -- (-517.596) [-513.343] (-557.161) (-579.141) * (-547.949) [-516.317] (-565.394) (-526.959) -- 0:06:09
Average standard deviation of split frequencies: 0.033527
116000 -- [-510.521] (-516.537) (-551.319) (-570.177) * (-545.487) [-510.074] (-556.883) (-535.587) -- 0:06:13
117000 -- (-517.694) [-513.712] (-558.352) (-560.342) * (-552.036) [-514.106] (-549.236) (-528.422) -- 0:06:09
118000 -- (-521.117) [-518.088] (-558.889) (-552.643) * (-543.426) [-508.438] (-552.041) (-527.557) -- 0:06:06
119000 -- (-518.681) [-521.178] (-559.725) (-557.044) * (-549.995) [-511.762] (-549.505) (-524.016) -- 0:06:10
120000 -- [-522.696] (-525.993) (-539.937) (-560.280) * (-549.864) [-513.855] (-554.926) (-520.592) -- 0:06:06
Average standard deviation of split frequencies: 0.031644
121000 -- [-515.486] (-520.437) (-554.209) (-557.924) * (-545.481) [-517.174] (-541.412) (-517.241) -- 0:06:10
122000 -- (-527.360) [-519.536] (-559.937) (-550.365) * (-536.794) [-516.319] (-565.660) (-525.449) -- 0:06:07
123000 -- [-520.408] (-519.559) (-555.172) (-544.854) * (-550.016) [-520.464] (-557.774) (-517.930) -- 0:06:03
124000 -- (-527.060) [-520.537] (-549.885) (-566.038) * (-541.553) [-520.289] (-550.662) (-522.872) -- 0:06:07
125000 -- (-529.431) [-519.125] (-555.550) (-564.186) * (-551.431) [-523.057] (-549.986) (-523.213) -- 0:06:04
Average standard deviation of split frequencies: 0.026699
126000 -- (-519.261) [-519.940] (-552.456) (-563.492) * (-552.588) [-517.147] (-546.715) (-517.643) -- 0:06:07
127000 -- [-512.025] (-512.932) (-554.029) (-560.990) * (-542.984) [-513.188] (-547.442) (-525.514) -- 0:06:04
128000 -- [-515.165] (-511.393) (-551.492) (-557.200) * (-540.303) [-516.784] (-545.574) (-520.963) -- 0:06:07
129000 -- (-519.057) [-510.657] (-545.952) (-554.629) * (-547.618) [-524.270] (-556.242) (-526.493) -- 0:06:04
130000 -- (-520.940) [-504.870] (-536.479) (-559.576) * (-545.024) [-520.402] (-553.851) (-517.292) -- 0:06:01
Average standard deviation of split frequencies: 0.028661
131000 -- (-529.183) [-507.750] (-545.994) (-551.386) * (-547.971) (-528.631) (-552.284) [-514.249] -- 0:06:04
132000 -- [-513.467] (-513.468) (-548.246) (-558.402) * (-543.414) (-540.538) (-554.382) [-514.304] -- 0:06:01
133000 -- (-527.815) [-509.704] (-544.248) (-559.731) * (-540.742) (-538.514) (-554.235) [-514.492] -- 0:06:05
134000 -- (-527.170) [-515.810] (-542.518) (-560.554) * (-544.910) (-524.388) (-557.715) [-520.345] -- 0:06:01
135000 -- (-521.776) [-511.409] (-545.987) (-557.673) * (-549.823) (-527.745) (-549.568) [-520.256] -- 0:06:05
Average standard deviation of split frequencies: 0.031604
136000 -- (-522.624) [-520.107] (-545.240) (-548.717) * (-552.328) (-535.868) (-548.252) [-505.659] -- 0:06:02
137000 -- (-523.911) [-513.745] (-542.817) (-561.122) * (-539.838) (-527.250) (-550.543) [-510.694] -- 0:05:59
138000 -- [-510.875] (-517.695) (-554.856) (-557.783) * (-546.880) [-514.957] (-555.581) (-518.644) -- 0:06:02
139000 -- [-514.924] (-515.341) (-554.392) (-547.079) * (-553.407) (-540.494) (-542.709) [-514.081] -- 0:05:59
140000 -- (-523.388) [-525.234] (-548.455) (-551.714) * (-548.704) (-524.431) (-548.940) [-515.916] -- 0:06:02
Average standard deviation of split frequencies: 0.033906
141000 -- [-512.357] (-520.657) (-544.808) (-551.639) * (-541.052) (-517.936) (-553.217) [-510.051] -- 0:05:59
142000 -- [-506.850] (-517.859) (-546.255) (-546.732) * (-540.894) (-531.561) (-549.911) [-515.600] -- 0:05:56
143000 -- [-514.644] (-516.444) (-555.851) (-550.301) * (-551.918) (-529.408) (-541.166) [-516.883] -- 0:05:59
144000 -- [-519.737] (-550.107) (-551.456) (-554.250) * (-550.119) (-513.112) (-552.225) [-516.061] -- 0:05:56
145000 -- [-510.993] (-544.998) (-549.636) (-552.251) * (-555.308) [-509.295] (-548.749) (-510.755) -- 0:05:59
Average standard deviation of split frequencies: 0.034799
146000 -- [-516.492] (-549.389) (-548.036) (-549.157) * (-547.915) (-520.194) (-558.482) [-512.985] -- 0:05:56
147000 -- [-509.570] (-544.808) (-551.884) (-556.695) * (-546.466) (-517.393) (-555.831) [-508.504] -- 0:05:59
148000 -- [-518.175] (-541.907) (-548.080) (-551.921) * (-547.210) (-518.895) (-550.626) [-518.712] -- 0:05:56
149000 -- [-513.824] (-541.335) (-543.149) (-556.521) * (-534.716) [-519.336] (-545.659) (-509.140) -- 0:05:54
150000 -- [-522.056] (-553.447) (-547.112) (-570.376) * (-543.390) [-519.792] (-549.689) (-518.530) -- 0:05:57
Average standard deviation of split frequencies: 0.030368
151000 -- [-521.653] (-543.444) (-544.933) (-549.821) * (-550.809) (-516.416) (-551.628) [-513.041] -- 0:05:54
152000 -- [-517.718] (-547.918) (-549.465) (-557.505) * (-539.141) (-522.154) (-545.819) [-519.338] -- 0:05:57
153000 -- [-514.630] (-550.363) (-543.631) (-544.227) * (-551.176) (-519.559) (-542.095) [-512.408] -- 0:05:54
154000 -- [-515.828] (-548.446) (-543.871) (-552.621) * (-546.437) (-519.517) (-552.255) [-514.999] -- 0:05:57
155000 -- [-514.073] (-552.723) (-549.291) (-557.092) * (-551.301) (-517.713) (-544.273) [-514.597] -- 0:05:54
Average standard deviation of split frequencies: 0.025447
156000 -- [-515.424] (-555.715) (-544.094) (-550.173) * (-557.423) [-517.516] (-551.366) (-522.713) -- 0:05:51
157000 -- [-518.962] (-557.332) (-554.935) (-557.217) * (-541.710) [-524.813] (-550.906) (-518.711) -- 0:05:54
158000 -- [-510.249] (-548.162) (-546.096) (-558.263) * (-548.693) [-518.952] (-547.196) (-516.249) -- 0:05:51
159000 -- [-518.879] (-549.943) (-542.904) (-560.853) * (-545.847) [-522.082] (-550.144) (-519.662) -- 0:05:54
160000 -- [-519.344] (-559.784) (-547.338) (-555.002) * (-541.146) [-510.858] (-544.589) (-524.781) -- 0:05:51
Average standard deviation of split frequencies: 0.024090
161000 -- [-523.468] (-555.509) (-548.369) (-560.384) * (-544.469) (-516.947) (-551.666) [-511.307] -- 0:05:49
162000 -- [-522.409] (-552.167) (-544.934) (-545.516) * (-547.884) [-510.159] (-543.667) (-523.358) -- 0:05:51
163000 -- [-514.132] (-551.488) (-552.164) (-553.755) * (-538.287) [-517.578] (-546.470) (-525.071) -- 0:05:49
164000 -- [-518.298] (-545.628) (-554.631) (-562.270) * (-549.457) (-518.870) (-545.398) [-522.928] -- 0:05:51
165000 -- [-511.426] (-554.067) (-556.532) (-558.902) * (-560.091) [-514.400] (-544.535) (-524.459) -- 0:05:49
Average standard deviation of split frequencies: 0.023765
166000 -- [-516.943] (-555.241) (-553.138) (-555.948) * (-558.427) (-520.197) (-555.782) [-512.518] -- 0:05:51
167000 -- [-521.705] (-553.919) (-542.565) (-545.966) * (-551.158) [-506.270] (-545.961) (-518.936) -- 0:05:49
168000 -- [-520.572] (-547.174) (-543.516) (-556.275) * (-557.573) [-517.575] (-543.089) (-514.482) -- 0:05:46
169000 -- [-521.895] (-550.035) (-541.480) (-553.688) * (-555.440) [-507.502] (-548.559) (-519.633) -- 0:05:49
170000 -- [-516.285] (-546.170) (-541.832) (-556.202) * (-546.400) (-522.440) (-537.000) [-513.677] -- 0:05:46
Average standard deviation of split frequencies: 0.022585
171000 -- [-519.533] (-549.902) (-550.735) (-556.626) * (-543.591) [-513.341] (-548.724) (-526.947) -- 0:05:49
172000 -- [-516.568] (-546.860) (-543.590) (-561.052) * (-556.347) [-514.828] (-556.740) (-520.510) -- 0:05:46
173000 -- [-513.189] (-545.309) (-544.003) (-551.135) * (-549.859) [-519.227] (-549.075) (-521.466) -- 0:05:48
174000 -- [-517.683] (-549.291) (-542.812) (-558.054) * (-553.626) (-513.119) (-547.088) [-518.224] -- 0:05:46
175000 -- [-507.165] (-551.612) (-545.268) (-556.840) * (-547.694) (-514.087) (-542.206) [-517.549] -- 0:05:44
Average standard deviation of split frequencies: 0.020237
176000 -- [-508.903] (-554.973) (-550.641) (-558.769) * (-538.491) (-516.140) (-540.154) [-519.755] -- 0:05:46
177000 -- [-518.098] (-551.462) (-538.925) (-555.260) * (-530.600) (-521.062) (-545.077) [-512.839] -- 0:05:44
178000 -- [-508.397] (-545.838) (-547.129) (-557.883) * (-539.359) [-518.259] (-563.523) (-523.095) -- 0:05:46
179000 -- [-511.582] (-542.016) (-549.048) (-551.961) * (-551.098) (-531.934) (-559.538) [-517.846] -- 0:05:43
180000 -- [-510.382] (-553.357) (-555.753) (-554.985) * (-549.764) [-516.109] (-550.174) (-530.944) -- 0:05:41
Average standard deviation of split frequencies: 0.023483
181000 -- [-506.102] (-551.165) (-554.640) (-546.546) * (-561.883) [-517.634] (-549.617) (-522.045) -- 0:05:43
182000 -- [-516.197] (-548.983) (-558.548) (-547.087) * (-540.209) [-522.077] (-548.759) (-524.790) -- 0:05:41
183000 -- [-515.087] (-546.745) (-551.372) (-550.792) * (-544.042) [-509.779] (-549.545) (-526.246) -- 0:05:43
184000 -- [-517.830] (-546.390) (-544.801) (-549.748) * (-545.277) (-515.166) (-550.160) [-531.292] -- 0:05:41
185000 -- [-514.255] (-541.843) (-554.705) (-554.993) * (-538.158) [-515.353] (-545.761) (-520.984) -- 0:05:43
Average standard deviation of split frequencies: 0.025626
186000 -- [-515.800] (-549.433) (-548.798) (-559.520) * (-552.401) (-517.544) (-541.377) [-515.277] -- 0:05:41
187000 -- [-510.834] (-555.721) (-539.977) (-549.417) * (-551.296) (-530.956) (-550.364) [-516.868] -- 0:05:39
188000 -- [-512.635] (-545.036) (-543.832) (-544.495) * (-545.235) [-521.362] (-545.548) (-517.175) -- 0:05:41
189000 -- [-513.761] (-545.991) (-539.991) (-553.109) * (-544.841) (-516.456) (-548.099) [-523.061] -- 0:05:38
190000 -- [-507.482] (-549.986) (-551.887) (-563.297) * (-549.677) [-516.003] (-544.598) (-520.991) -- 0:05:41
Average standard deviation of split frequencies: 0.024869
191000 -- [-510.199] (-559.750) (-550.435) (-555.387) * (-555.803) (-529.697) (-556.563) [-509.576] -- 0:05:38
192000 -- [-517.454] (-553.017) (-546.090) (-565.831) * (-556.352) (-519.955) (-554.361) [-510.434] -- 0:05:40
193000 -- [-515.971] (-542.479) (-551.772) (-549.733) * (-542.022) [-512.877] (-550.268) (-524.905) -- 0:05:38
194000 -- [-511.101] (-546.675) (-551.853) (-546.022) * (-547.757) (-515.114) (-556.745) [-520.365] -- 0:05:36
195000 -- [-515.367] (-549.464) (-551.803) (-554.637) * (-548.826) (-518.653) (-555.658) [-510.622] -- 0:05:38
Average standard deviation of split frequencies: 0.024334
196000 -- [-509.281] (-541.186) (-545.900) (-556.044) * (-543.185) (-516.930) (-542.979) [-510.555] -- 0:05:36
197000 -- [-511.480] (-548.932) (-553.331) (-556.569) * (-538.969) [-509.624] (-538.866) (-528.477) -- 0:05:38
198000 -- [-507.031] (-557.066) (-549.482) (-562.651) * (-544.179) [-522.966] (-544.294) (-527.778) -- 0:05:36
199000 -- [-515.083] (-553.467) (-545.521) (-554.569) * (-540.829) [-510.804] (-554.192) (-518.316) -- 0:05:34
200000 -- [-510.603] (-552.567) (-541.455) (-545.381) * (-551.952) [-513.050] (-545.366) (-512.748) -- 0:05:36
Average standard deviation of split frequencies: 0.024144
201000 -- [-513.668] (-545.112) (-547.717) (-555.957) * (-544.927) [-521.782] (-550.742) (-520.462) -- 0:05:33
202000 -- [-527.512] (-546.316) (-549.644) (-551.788) * (-554.846) [-518.357] (-564.411) (-532.862) -- 0:05:35
203000 -- [-518.489] (-559.681) (-561.201) (-545.294) * (-548.885) [-512.939] (-555.721) (-523.165) -- 0:05:33
204000 -- [-511.004] (-569.991) (-551.607) (-553.350) * (-539.704) [-510.210] (-547.942) (-523.577) -- 0:05:35
205000 -- [-517.803] (-549.937) (-554.549) (-555.778) * (-536.078) (-527.547) (-549.816) [-521.683] -- 0:05:33
Average standard deviation of split frequencies: 0.026189
206000 -- [-514.999] (-549.682) (-553.134) (-559.345) * (-540.728) (-513.941) (-560.449) [-518.262] -- 0:05:31
207000 -- [-516.243] (-546.480) (-545.094) (-567.615) * (-549.383) [-517.809] (-555.122) (-515.372) -- 0:05:33
208000 -- [-520.210] (-545.047) (-543.532) (-571.785) * (-562.048) (-518.260) (-558.779) [-510.768] -- 0:05:31
209000 -- [-513.924] (-551.757) (-550.968) (-554.800) * (-547.586) [-522.339] (-554.785) (-510.617) -- 0:05:33
210000 -- [-509.902] (-545.623) (-556.729) (-554.211) * (-557.090) (-515.167) (-563.909) [-513.341] -- 0:05:31
Average standard deviation of split frequencies: 0.029587
211000 -- [-515.309] (-554.345) (-553.039) (-558.512) * (-548.927) [-520.961] (-549.223) (-522.094) -- 0:05:29
212000 -- [-514.683] (-546.607) (-557.447) (-542.859) * (-547.304) (-514.309) (-556.349) [-514.681] -- 0:05:30
213000 -- [-522.599] (-551.111) (-547.424) (-553.096) * (-553.878) [-518.961] (-547.015) (-521.385) -- 0:05:28
214000 -- [-517.186] (-558.922) (-554.862) (-549.446) * (-548.068) (-515.029) (-554.202) [-520.601] -- 0:05:30
215000 -- [-520.957] (-550.014) (-556.202) (-557.039) * (-550.561) [-510.919] (-546.842) (-520.396) -- 0:05:28
Average standard deviation of split frequencies: 0.035283
216000 -- [-514.792] (-563.788) (-544.753) (-545.529) * (-558.686) (-518.948) (-542.662) [-516.105] -- 0:05:30
217000 -- [-517.347] (-556.429) (-544.662) (-550.407) * (-548.975) (-522.394) (-543.672) [-510.697] -- 0:05:28
218000 -- [-517.853] (-548.907) (-541.244) (-544.811) * (-549.190) [-521.775] (-556.074) (-511.809) -- 0:05:26
219000 -- [-515.019] (-552.247) (-551.994) (-549.639) * (-547.820) [-511.633] (-543.207) (-518.688) -- 0:05:28
220000 -- [-519.207] (-553.661) (-555.645) (-544.993) * (-546.580) [-512.415] (-550.771) (-515.030) -- 0:05:26
Average standard deviation of split frequencies: 0.039284
221000 -- [-510.804] (-547.524) (-550.752) (-549.827) * (-543.518) [-519.240] (-550.549) (-513.138) -- 0:05:27
222000 -- [-516.579] (-568.932) (-549.086) (-542.541) * (-542.459) (-520.678) (-557.893) [-505.373] -- 0:05:25
223000 -- [-520.699] (-541.637) (-545.572) (-545.550) * (-539.761) (-518.729) (-540.464) [-511.329] -- 0:05:24
224000 -- [-511.415] (-554.832) (-551.034) (-547.182) * (-536.634) (-526.126) (-556.096) [-506.921] -- 0:05:25
225000 -- [-515.002] (-555.520) (-535.335) (-553.507) * (-546.056) (-516.435) (-558.264) [-502.557] -- 0:05:23
Average standard deviation of split frequencies: 0.043108
226000 -- [-512.831] (-553.170) (-542.724) (-542.784) * (-545.947) [-520.132] (-550.856) (-516.023) -- 0:05:25
227000 -- [-503.839] (-554.642) (-541.370) (-548.785) * (-555.684) (-522.474) (-545.510) [-517.949] -- 0:05:23
228000 -- [-507.873] (-548.167) (-545.634) (-545.299) * (-549.614) (-518.151) (-549.873) [-519.207] -- 0:05:21
229000 -- [-515.072] (-546.344) (-553.745) (-543.919) * (-554.313) [-515.437] (-540.744) (-523.466) -- 0:05:23
230000 -- [-509.398] (-552.038) (-547.636) (-547.579) * (-546.017) (-513.951) (-551.879) [-516.649] -- 0:05:21
Average standard deviation of split frequencies: 0.042463
231000 -- [-509.507] (-554.024) (-551.277) (-548.193) * (-543.488) [-511.306] (-549.426) (-515.756) -- 0:05:22
232000 -- [-520.155] (-551.272) (-560.156) (-555.372) * (-556.872) [-520.604] (-541.210) (-513.507) -- 0:05:21
233000 -- [-508.011] (-548.437) (-548.512) (-552.309) * (-546.223) [-513.285] (-549.794) (-513.277) -- 0:05:19
234000 -- [-515.646] (-555.694) (-557.245) (-547.431) * (-547.281) [-521.240] (-546.952) (-524.064) -- 0:05:20
235000 -- [-510.954] (-537.851) (-554.203) (-553.963) * (-550.740) (-523.006) (-550.288) [-516.347] -- 0:05:19
Average standard deviation of split frequencies: 0.039395
236000 -- [-510.424] (-548.958) (-554.333) (-558.040) * (-557.088) (-523.104) (-550.532) [-513.629] -- 0:05:20
237000 -- [-513.335] (-544.369) (-551.036) (-555.249) * (-551.714) [-522.141] (-549.877) (-514.839) -- 0:05:18
238000 -- [-507.502] (-555.800) (-546.690) (-557.738) * (-556.733) (-524.234) (-557.563) [-513.826] -- 0:05:20
239000 -- [-510.101] (-555.065) (-546.691) (-553.079) * (-549.747) [-518.890] (-550.542) (-524.238) -- 0:05:18
240000 -- [-513.551] (-558.030) (-543.502) (-550.305) * (-549.497) (-521.325) (-547.382) [-519.998] -- 0:05:16
Average standard deviation of split frequencies: 0.034822
241000 -- [-520.813] (-545.010) (-542.549) (-556.142) * (-556.856) (-519.015) (-557.402) [-512.401] -- 0:05:18
242000 -- [-520.432] (-541.977) (-549.413) (-550.563) * (-557.182) (-522.058) (-551.509) [-510.224] -- 0:05:16
243000 -- [-512.419] (-546.849) (-558.222) (-550.196) * (-547.445) [-521.814] (-554.176) (-507.943) -- 0:05:17
244000 -- [-516.106] (-557.118) (-556.244) (-560.713) * (-541.808) (-514.850) (-548.633) [-512.145] -- 0:05:16
245000 -- [-510.649] (-549.748) (-552.384) (-553.679) * (-551.765) (-516.212) (-551.194) [-517.499] -- 0:05:14
Average standard deviation of split frequencies: 0.035983
246000 -- [-516.154] (-547.205) (-549.347) (-554.118) * (-553.047) [-516.359] (-559.077) (-523.264) -- 0:05:15
247000 -- [-513.401] (-550.695) (-547.561) (-556.715) * (-550.415) (-525.603) (-557.811) [-510.361] -- 0:05:14
248000 -- [-514.390] (-562.030) (-548.882) (-554.535) * (-549.462) (-515.178) (-563.337) [-516.450] -- 0:05:15
249000 -- [-511.412] (-556.730) (-548.116) (-547.504) * (-550.430) (-523.686) (-544.478) [-519.624] -- 0:05:13
250000 -- [-512.849] (-546.097) (-547.226) (-556.202) * (-543.387) [-513.596] (-550.627) (-528.356) -- 0:05:12
Average standard deviation of split frequencies: 0.035178
251000 -- [-512.500] (-541.287) (-561.174) (-555.333) * (-538.825) [-515.334] (-547.408) (-515.957) -- 0:05:13
252000 -- [-516.936] (-547.230) (-555.835) (-541.685) * (-543.427) [-513.210] (-552.859) (-520.638) -- 0:05:11
253000 -- [-513.177] (-545.139) (-557.612) (-556.743) * (-562.420) (-516.181) (-541.400) [-522.401] -- 0:05:12
254000 -- [-514.648] (-559.575) (-546.106) (-552.725) * (-556.173) [-519.924] (-546.758) (-517.268) -- 0:05:11
255000 -- [-517.662] (-551.694) (-540.914) (-553.920) * (-541.643) (-523.847) (-551.431) [-515.075] -- 0:05:12
Average standard deviation of split frequencies: 0.036395
256000 -- [-510.499] (-542.722) (-548.118) (-552.352) * (-540.068) (-516.442) (-545.977) [-512.687] -- 0:05:10
257000 -- [-514.368] (-545.907) (-546.145) (-553.083) * (-548.654) (-524.115) (-547.923) [-510.258] -- 0:05:09
258000 -- [-515.581] (-546.381) (-548.011) (-545.048) * (-559.557) (-523.366) (-548.108) [-506.644] -- 0:05:10
259000 -- [-522.227] (-543.955) (-545.874) (-552.138) * (-545.076) (-536.182) (-560.317) [-509.053] -- 0:05:08
260000 -- [-525.428] (-548.444) (-544.707) (-544.419) * (-540.478) [-523.915] (-549.067) (-512.939) -- 0:05:10
Average standard deviation of split frequencies: 0.039254
261000 -- [-524.328] (-552.799) (-558.735) (-554.371) * (-557.587) (-521.459) (-548.151) [-516.323] -- 0:05:08
262000 -- [-525.042] (-549.564) (-556.646) (-547.288) * (-551.998) [-519.408] (-546.384) (-510.929) -- 0:05:07
263000 -- [-515.609] (-543.055) (-544.083) (-560.333) * (-544.725) [-512.662] (-541.124) (-520.335) -- 0:05:08
264000 -- [-510.867] (-555.579) (-552.610) (-553.251) * (-542.947) [-514.520] (-551.020) (-519.760) -- 0:05:06
265000 -- [-520.291] (-559.284) (-545.560) (-554.926) * (-546.876) [-512.203] (-560.786) (-521.219) -- 0:05:07
Average standard deviation of split frequencies: 0.037039
266000 -- [-526.220] (-547.933) (-547.269) (-551.349) * (-538.917) [-515.470] (-547.828) (-527.938) -- 0:05:06
267000 -- [-521.779] (-558.926) (-546.058) (-551.306) * (-535.237) [-511.641] (-551.941) (-518.108) -- 0:05:07
268000 -- [-515.288] (-561.923) (-544.373) (-562.305) * (-542.344) [-515.814] (-558.945) (-518.060) -- 0:05:05
269000 -- [-521.785] (-544.128) (-554.116) (-556.862) * (-545.892) (-513.223) (-546.874) [-523.742] -- 0:05:04
270000 -- [-513.535] (-549.205) (-543.944) (-552.667) * (-544.493) [-511.340] (-551.161) (-518.777) -- 0:05:05
Average standard deviation of split frequencies: 0.039090
271000 -- [-516.515] (-556.113) (-542.389) (-560.859) * (-554.609) [-513.475] (-545.819) (-517.428) -- 0:05:03
272000 -- [-518.968] (-566.553) (-549.566) (-552.832) * (-557.333) (-518.253) (-557.162) [-516.547] -- 0:05:05
273000 -- [-520.042] (-549.102) (-548.614) (-553.614) * (-544.370) (-515.303) (-544.897) [-507.049] -- 0:05:03
274000 -- [-515.252] (-548.149) (-542.348) (-557.194) * (-548.977) (-511.062) (-550.585) [-508.364] -- 0:05:02
275000 -- [-508.068] (-553.170) (-550.301) (-546.698) * (-547.623) (-515.547) (-545.765) [-513.070] -- 0:05:03
Average standard deviation of split frequencies: 0.038145
276000 -- [-509.013] (-549.199) (-548.697) (-550.470) * (-555.257) (-520.708) (-552.677) [-516.627] -- 0:05:01
277000 -- [-508.655] (-545.047) (-560.560) (-553.857) * (-547.550) (-517.853) (-555.429) [-519.121] -- 0:05:02
278000 -- [-509.065] (-550.891) (-553.844) (-562.164) * (-545.964) (-519.015) (-549.985) [-519.423] -- 0:05:01
279000 -- [-513.186] (-555.291) (-548.344) (-551.389) * (-537.435) [-521.619] (-551.214) (-521.604) -- 0:04:59
280000 -- [-509.283] (-554.802) (-551.772) (-555.768) * (-552.623) [-516.770] (-549.794) (-515.959) -- 0:05:00
Average standard deviation of split frequencies: 0.037418
281000 -- [-510.188] (-549.155) (-558.545) (-554.128) * (-549.248) [-523.270] (-550.789) (-520.111) -- 0:04:59
282000 -- [-520.867] (-538.846) (-545.885) (-544.903) * (-548.880) (-525.529) (-549.418) [-519.968] -- 0:05:00
283000 -- [-511.869] (-547.322) (-539.290) (-551.847) * (-547.181) (-527.967) (-549.178) [-514.687] -- 0:04:58
284000 -- [-521.872] (-541.260) (-539.219) (-560.832) * (-549.873) [-512.065] (-554.542) (-527.484) -- 0:05:00
285000 -- [-516.553] (-545.598) (-552.839) (-551.639) * (-546.652) [-515.459] (-549.759) (-513.657) -- 0:04:58
Average standard deviation of split frequencies: 0.038185
286000 -- [-521.677] (-561.005) (-539.267) (-547.074) * (-547.418) [-525.007] (-566.471) (-519.064) -- 0:04:57
287000 -- [-512.405] (-548.125) (-546.164) (-555.208) * (-540.111) (-516.868) (-552.414) [-516.625] -- 0:04:58
288000 -- [-522.073] (-547.375) (-544.877) (-559.031) * (-544.814) (-517.577) (-550.560) [-511.369] -- 0:04:56
289000 -- [-516.578] (-542.374) (-554.927) (-563.488) * (-544.030) (-522.476) (-553.628) [-508.458] -- 0:04:57
290000 -- [-516.672] (-549.840) (-541.879) (-559.671) * (-545.705) [-515.909] (-559.102) (-510.175) -- 0:04:56
Average standard deviation of split frequencies: 0.035499
291000 -- [-519.629] (-543.186) (-547.077) (-551.208) * (-548.191) (-522.491) (-565.236) [-509.968] -- 0:04:54
292000 -- [-521.219] (-551.071) (-552.862) (-555.308) * (-550.283) (-528.994) (-543.860) [-508.734] -- 0:04:55
293000 -- [-515.688] (-551.904) (-541.238) (-550.737) * (-548.581) (-519.290) (-554.246) [-516.658] -- 0:04:54
294000 -- [-516.974] (-556.761) (-546.596) (-546.874) * (-550.806) [-519.004] (-543.049) (-514.841) -- 0:04:55
295000 -- [-514.765] (-547.791) (-553.890) (-558.128) * (-548.733) (-526.101) (-544.715) [-517.858] -- 0:04:53
Average standard deviation of split frequencies: 0.032187
296000 -- [-513.651] (-547.878) (-545.039) (-545.262) * (-553.728) (-527.790) (-555.649) [-515.292] -- 0:04:54
297000 -- [-520.933] (-552.456) (-545.848) (-543.151) * (-543.162) (-520.583) (-553.288) [-518.101] -- 0:04:53
298000 -- [-523.400] (-554.571) (-544.384) (-548.608) * (-545.527) (-523.786) (-554.555) [-517.632] -- 0:04:52
299000 -- [-516.714] (-550.584) (-547.377) (-560.760) * (-552.951) [-519.572] (-554.744) (-523.601) -- 0:04:53
300000 -- [-511.505] (-555.559) (-547.673) (-557.442) * (-547.299) (-512.858) (-554.716) [-517.131] -- 0:04:51
Average standard deviation of split frequencies: 0.030225
301000 -- [-510.878] (-554.948) (-543.062) (-560.953) * (-548.209) [-510.085] (-564.191) (-523.334) -- 0:04:52
302000 -- [-511.147] (-542.569) (-544.569) (-546.310) * (-544.110) (-522.614) (-550.426) [-516.169] -- 0:04:51
303000 -- [-508.356] (-558.550) (-547.972) (-553.920) * (-541.967) (-524.668) (-551.037) [-508.384] -- 0:04:49
304000 -- [-518.403] (-541.794) (-553.625) (-552.657) * (-554.447) (-527.978) (-554.110) [-515.846] -- 0:04:50
305000 -- [-515.425] (-547.416) (-546.300) (-555.364) * (-541.412) [-513.906] (-546.868) (-514.217) -- 0:04:49
Average standard deviation of split frequencies: 0.030630
306000 -- [-519.229] (-546.006) (-550.948) (-543.868) * (-552.880) [-510.258] (-547.823) (-520.693) -- 0:04:50
307000 -- [-509.632] (-550.802) (-550.989) (-560.948) * (-550.694) [-522.001] (-551.255) (-511.413) -- 0:04:48
308000 -- [-510.002] (-549.355) (-542.051) (-554.889) * (-547.161) (-513.743) (-558.292) [-526.741] -- 0:04:47
309000 -- [-513.167] (-548.871) (-544.296) (-553.511) * (-555.149) [-507.570] (-552.785) (-520.091) -- 0:04:48
310000 -- [-507.536] (-544.643) (-546.684) (-557.146) * (-555.872) (-515.817) (-549.465) [-517.756] -- 0:04:47
Average standard deviation of split frequencies: 0.032401
311000 -- [-506.852] (-543.171) (-558.025) (-549.801) * (-545.382) (-526.497) (-544.494) [-522.530] -- 0:04:48
312000 -- [-509.585] (-545.553) (-550.397) (-547.654) * (-549.333) (-513.686) (-560.369) [-510.176] -- 0:04:46
313000 -- [-512.211] (-550.243) (-551.747) (-554.362) * (-540.377) (-519.861) (-551.572) [-524.597] -- 0:04:45
314000 -- [-507.480] (-549.810) (-538.631) (-559.895) * (-552.751) [-514.597] (-565.292) (-525.363) -- 0:04:46
315000 -- [-520.552] (-550.589) (-546.405) (-544.322) * (-552.560) [-515.383] (-551.110) (-517.461) -- 0:04:44
Average standard deviation of split frequencies: 0.035057
316000 -- [-521.622] (-540.744) (-546.994) (-564.523) * (-547.452) [-510.367] (-551.509) (-525.895) -- 0:04:45
317000 -- [-527.262] (-552.401) (-551.329) (-545.165) * (-546.357) [-513.063] (-550.723) (-522.361) -- 0:04:44
318000 -- [-514.508] (-553.393) (-545.416) (-557.974) * (-541.247) [-516.491] (-547.260) (-528.354) -- 0:04:45
319000 -- [-515.387] (-554.296) (-552.330) (-549.969) * (-537.987) [-514.835] (-562.488) (-522.098) -- 0:04:43
320000 -- [-513.776] (-541.078) (-545.053) (-555.813) * (-545.730) (-518.982) (-545.885) [-522.897] -- 0:04:42
Average standard deviation of split frequencies: 0.033996
321000 -- [-515.580] (-561.354) (-543.692) (-546.597) * (-545.558) [-524.568] (-547.680) (-521.424) -- 0:04:43
322000 -- [-525.864] (-558.941) (-543.914) (-555.438) * (-540.671) [-515.586] (-547.005) (-529.762) -- 0:04:42
323000 -- [-510.096] (-545.355) (-543.058) (-554.985) * (-541.718) [-517.865] (-549.358) (-520.206) -- 0:04:42
324000 -- [-515.235] (-544.685) (-547.568) (-551.968) * (-541.048) [-521.822] (-551.790) (-520.264) -- 0:04:41
325000 -- [-521.569] (-541.403) (-549.179) (-547.835) * (-539.714) (-518.834) (-555.909) [-517.484] -- 0:04:40
Average standard deviation of split frequencies: 0.030281
326000 -- [-516.473] (-543.364) (-549.530) (-556.065) * (-536.323) [-516.414] (-542.194) (-514.283) -- 0:04:41
327000 -- [-519.556] (-546.694) (-544.907) (-552.124) * (-554.390) (-519.424) (-553.314) [-511.243] -- 0:04:39
328000 -- [-523.905] (-545.462) (-557.624) (-547.031) * (-550.947) (-526.684) (-543.505) [-517.849] -- 0:04:40
329000 -- [-511.235] (-551.799) (-558.737) (-556.331) * (-550.957) (-524.826) (-554.700) [-515.126] -- 0:04:39
330000 -- [-517.384] (-549.854) (-549.169) (-554.754) * (-557.888) (-523.984) (-555.313) [-521.407] -- 0:04:40
Average standard deviation of split frequencies: 0.026374
331000 -- [-511.854] (-544.594) (-548.771) (-549.662) * (-547.942) [-508.968] (-555.988) (-519.280) -- 0:04:38
332000 -- [-512.698] (-543.609) (-550.968) (-558.484) * (-543.745) (-512.743) (-545.901) [-520.038] -- 0:04:37
333000 -- [-521.969] (-545.746) (-547.165) (-551.627) * (-546.877) (-514.688) (-546.495) [-513.646] -- 0:04:38
334000 -- [-512.867] (-559.423) (-554.021) (-547.282) * (-544.580) [-512.619] (-551.258) (-517.876) -- 0:04:37
335000 -- [-512.797] (-539.982) (-557.206) (-546.767) * (-550.125) [-517.841] (-549.104) (-520.423) -- 0:04:37
Average standard deviation of split frequencies: 0.022448
336000 -- [-518.645] (-554.743) (-558.118) (-548.282) * (-544.990) (-522.749) (-545.850) [-519.789] -- 0:04:36
337000 -- [-514.443] (-544.298) (-551.362) (-563.668) * (-550.017) (-519.483) (-546.739) [-518.292] -- 0:04:37
338000 -- [-512.535] (-553.563) (-557.209) (-563.924) * (-554.558) (-510.128) (-549.031) [-527.587] -- 0:04:36
339000 -- [-506.102] (-544.832) (-554.195) (-556.849) * (-554.886) (-526.659) (-554.788) [-509.617] -- 0:04:34
340000 -- [-516.857] (-545.407) (-556.257) (-551.443) * (-546.741) (-515.875) (-548.813) [-511.695] -- 0:04:35
Average standard deviation of split frequencies: 0.021362
341000 -- [-517.492] (-550.539) (-554.686) (-556.824) * (-548.254) [-518.176] (-544.845) (-513.425) -- 0:04:34
342000 -- [-519.146] (-555.255) (-560.901) (-550.846) * (-546.458) [-507.996] (-545.621) (-524.446) -- 0:04:35
343000 -- [-518.301] (-558.143) (-547.365) (-549.269) * (-538.041) [-515.582] (-542.718) (-515.533) -- 0:04:33
344000 -- [-528.948] (-556.176) (-544.539) (-541.809) * (-549.785) (-520.720) (-545.964) [-512.288] -- 0:04:32
345000 -- [-518.703] (-553.156) (-539.843) (-551.577) * (-547.265) [-523.135] (-556.062) (-509.816) -- 0:04:33
Average standard deviation of split frequencies: 0.020757
346000 -- [-523.320] (-558.053) (-548.750) (-545.110) * (-546.891) [-512.977] (-547.822) (-519.675) -- 0:04:32
347000 -- [-522.884] (-555.779) (-555.884) (-543.412) * (-538.373) [-508.874] (-550.873) (-520.082) -- 0:04:32
348000 -- [-521.116] (-556.146) (-539.859) (-548.716) * (-545.600) [-517.653] (-543.266) (-523.081) -- 0:04:31
349000 -- [-523.467] (-550.325) (-549.017) (-552.148) * (-544.152) (-519.759) (-543.928) [-521.083] -- 0:04:32
350000 -- [-524.619] (-554.477) (-553.989) (-554.968) * (-543.911) (-519.583) (-555.597) [-517.464] -- 0:04:31
Average standard deviation of split frequencies: 0.018741
351000 -- [-512.469] (-550.828) (-547.926) (-554.839) * (-552.624) [-510.639] (-550.461) (-514.050) -- 0:04:29
352000 -- [-504.800] (-547.649) (-545.625) (-555.728) * (-548.352) [-505.849] (-550.266) (-515.062) -- 0:04:30
353000 -- [-508.677] (-557.498) (-540.305) (-557.796) * (-549.652) (-523.993) (-553.926) [-507.977] -- 0:04:29
354000 -- [-510.305] (-537.918) (-548.350) (-560.940) * (-546.255) (-511.176) (-545.948) [-511.386] -- 0:04:30
355000 -- [-513.476] (-550.207) (-546.118) (-554.035) * (-556.840) [-512.636] (-557.307) (-519.643) -- 0:04:28
Average standard deviation of split frequencies: 0.016280
356000 -- [-526.774] (-548.495) (-550.417) (-551.580) * (-543.617) [-521.975] (-548.220) (-520.087) -- 0:04:27
357000 -- [-518.641] (-550.873) (-551.381) (-541.980) * (-552.523) (-511.642) (-551.046) [-520.603] -- 0:04:28
358000 -- [-516.629] (-538.234) (-552.508) (-546.798) * (-558.391) [-515.970] (-551.801) (-521.744) -- 0:04:27
359000 -- [-517.474] (-544.844) (-555.555) (-552.359) * (-549.649) (-526.653) (-552.420) [-512.424] -- 0:04:27
360000 -- [-513.907] (-546.153) (-545.691) (-553.746) * (-540.828) (-514.840) (-540.919) [-513.934] -- 0:04:26
Average standard deviation of split frequencies: 0.015031
361000 -- [-513.527] (-542.659) (-546.885) (-549.370) * (-551.983) [-512.217] (-543.332) (-517.940) -- 0:04:27
362000 -- [-514.168] (-548.250) (-543.856) (-549.142) * (-544.392) [-508.699] (-545.434) (-517.807) -- 0:04:26
363000 -- [-520.734] (-555.216) (-539.799) (-550.736) * (-547.460) [-518.070] (-549.349) (-513.155) -- 0:04:24
364000 -- [-516.571] (-554.649) (-550.220) (-543.143) * (-538.481) (-517.936) (-549.841) [-507.084] -- 0:04:25
365000 -- [-508.572] (-560.778) (-548.607) (-542.163) * (-551.779) [-522.855] (-552.419) (-513.879) -- 0:04:24
Average standard deviation of split frequencies: 0.014319
366000 -- [-512.479] (-547.818) (-554.759) (-541.711) * (-552.646) (-514.905) (-552.004) [-516.615] -- 0:04:25
367000 -- [-511.403] (-561.080) (-551.989) (-545.533) * (-541.097) (-524.788) (-553.200) [-513.479] -- 0:04:23
368000 -- [-506.677] (-552.623) (-546.442) (-546.542) * (-544.454) (-524.853) (-546.367) [-508.675] -- 0:04:22
369000 -- [-510.342] (-561.839) (-539.520) (-553.966) * (-552.094) (-521.758) (-565.673) [-518.849] -- 0:04:23
370000 -- [-515.247] (-549.069) (-559.034) (-550.762) * (-555.266) (-533.516) (-559.990) [-511.546] -- 0:04:22
Average standard deviation of split frequencies: 0.012956
371000 -- [-512.825] (-546.890) (-548.350) (-554.656) * (-542.267) [-517.244] (-559.722) (-515.566) -- 0:04:22
372000 -- [-517.933] (-574.557) (-547.233) (-557.165) * (-535.100) (-518.027) (-558.479) [-521.981] -- 0:04:21
373000 -- [-514.631] (-559.275) (-550.135) (-563.816) * (-550.016) (-512.998) (-552.934) [-511.829] -- 0:04:22
374000 -- [-525.484] (-562.985) (-544.231) (-551.722) * (-542.184) (-525.938) (-558.001) [-515.780] -- 0:04:21
375000 -- [-517.587] (-552.484) (-545.453) (-551.610) * (-542.609) (-525.800) (-553.934) [-521.358] -- 0:04:20
Average standard deviation of split frequencies: 0.015672
376000 -- [-518.982] (-547.137) (-553.759) (-550.103) * (-540.551) (-519.103) (-546.359) [-513.156] -- 0:04:20
377000 -- [-528.068] (-545.089) (-559.619) (-548.684) * (-547.624) (-527.188) (-554.865) [-514.458] -- 0:04:19
378000 -- [-513.904] (-553.628) (-549.223) (-554.671) * (-542.503) (-532.619) (-550.171) [-515.793] -- 0:04:19
379000 -- [-517.839] (-546.701) (-548.792) (-551.115) * (-547.718) (-513.844) (-551.748) [-505.984] -- 0:04:18
380000 -- [-520.991] (-541.819) (-545.194) (-549.378) * (-545.503) (-521.906) (-554.576) [-506.926] -- 0:04:17
Average standard deviation of split frequencies: 0.018188
381000 -- [-514.443] (-540.039) (-543.980) (-550.836) * (-548.039) (-515.371) (-550.726) [-507.615] -- 0:04:18
382000 -- [-511.117] (-555.257) (-548.877) (-550.572) * (-557.230) (-521.077) (-555.827) [-508.961] -- 0:04:17
383000 -- [-510.491] (-548.978) (-549.921) (-549.110) * (-544.775) (-523.856) (-550.596) [-521.192] -- 0:04:17
384000 -- [-514.908] (-552.537) (-560.074) (-548.132) * (-553.167) [-516.366] (-554.290) (-519.739) -- 0:04:16
385000 -- [-507.089] (-547.793) (-556.270) (-552.411) * (-544.429) (-520.245) (-553.832) [-514.489] -- 0:04:17
Average standard deviation of split frequencies: 0.016451
386000 -- [-507.868] (-544.993) (-557.719) (-551.458) * (-554.464) (-522.248) (-543.851) [-510.509] -- 0:04:16
387000 -- [-513.830] (-546.017) (-553.656) (-553.257) * (-547.398) [-514.289] (-550.138) (-524.939) -- 0:04:15
388000 -- [-513.269] (-545.269) (-553.660) (-558.540) * (-543.080) [-508.614] (-551.874) (-526.028) -- 0:04:15
389000 -- [-511.854] (-548.703) (-552.123) (-560.307) * (-546.088) [-508.195] (-556.636) (-523.980) -- 0:04:14
390000 -- [-512.830] (-557.854) (-548.537) (-553.581) * (-546.138) [-508.194] (-550.270) (-523.769) -- 0:04:14
Average standard deviation of split frequencies: 0.016255
391000 -- [-514.813] (-544.777) (-553.646) (-559.328) * (-543.632) [-509.538] (-554.691) (-527.334) -- 0:04:13
392000 -- [-514.606] (-548.560) (-543.661) (-561.941) * (-542.111) (-518.268) (-567.145) [-514.579] -- 0:04:12
393000 -- [-518.656] (-552.302) (-547.320) (-561.325) * (-556.284) [-516.118] (-557.016) (-520.368) -- 0:04:13
394000 -- [-519.774] (-546.527) (-565.080) (-560.495) * (-552.791) (-512.061) (-552.718) [-508.522] -- 0:04:12
395000 -- [-522.493] (-541.215) (-552.416) (-558.163) * (-542.483) [-511.313] (-555.755) (-523.977) -- 0:04:12
Average standard deviation of split frequencies: 0.017016
396000 -- [-518.194] (-547.365) (-559.530) (-558.192) * (-538.819) (-514.213) (-549.381) [-516.696] -- 0:04:11
397000 -- [-527.272] (-534.056) (-557.633) (-559.681) * (-539.280) [-519.133] (-550.060) (-518.805) -- 0:04:12
398000 -- [-515.128] (-545.553) (-547.785) (-563.994) * (-548.158) (-515.607) (-557.955) [-516.166] -- 0:04:11
399000 -- [-516.688] (-534.930) (-547.041) (-553.542) * (-540.465) [-509.501] (-555.231) (-515.317) -- 0:04:10
400000 -- [-520.512] (-545.093) (-547.132) (-555.503) * (-548.915) (-522.332) (-555.947) [-520.295] -- 0:04:10
Average standard deviation of split frequencies: 0.017164
401000 -- [-513.797] (-542.275) (-550.357) (-566.547) * (-553.958) (-519.977) (-550.704) [-513.487] -- 0:04:09
402000 -- [-510.852] (-546.677) (-551.684) (-553.787) * (-559.641) (-511.397) (-554.867) [-515.878] -- 0:04:09
403000 -- [-513.977] (-554.954) (-547.845) (-561.678) * (-549.759) [-518.817] (-544.309) (-518.437) -- 0:04:08
404000 -- [-513.011] (-550.956) (-555.313) (-552.574) * (-547.777) [-513.028] (-560.208) (-511.507) -- 0:04:07
405000 -- [-511.597] (-543.590) (-543.151) (-551.239) * (-549.964) [-527.438] (-544.439) (-517.088) -- 0:04:08
Average standard deviation of split frequencies: 0.017621
406000 -- [-512.080] (-548.104) (-542.625) (-552.204) * (-545.996) (-526.664) (-542.719) [-509.896] -- 0:04:07
407000 -- [-518.434] (-554.109) (-570.954) (-552.177) * (-542.873) (-527.785) (-544.845) [-507.295] -- 0:04:07
408000 -- [-509.218] (-549.408) (-560.300) (-557.668) * (-543.004) (-519.921) (-558.195) [-517.261] -- 0:04:06
409000 -- [-512.380] (-552.160) (-556.098) (-548.855) * (-551.337) (-520.924) (-548.991) [-513.786] -- 0:04:07
410000 -- [-512.538] (-545.983) (-548.410) (-547.010) * (-541.683) (-520.197) (-549.956) [-509.861] -- 0:04:06
Average standard deviation of split frequencies: 0.017691
411000 -- [-521.302] (-544.391) (-553.120) (-558.070) * (-558.074) (-529.762) (-559.649) [-512.585] -- 0:04:05
412000 -- [-511.464] (-539.420) (-551.095) (-546.526) * (-542.820) (-530.346) (-550.408) [-519.573] -- 0:04:05
413000 -- [-511.597] (-558.791) (-553.716) (-548.231) * (-546.472) (-535.508) (-551.809) [-524.208] -- 0:04:04
414000 -- [-507.529] (-551.208) (-556.085) (-545.087) * (-557.569) (-524.511) (-562.385) [-510.341] -- 0:04:04
415000 -- [-513.909] (-550.660) (-543.775) (-548.645) * (-542.456) (-535.467) (-550.805) [-514.651] -- 0:04:03
Average standard deviation of split frequencies: 0.017264
416000 -- [-514.313] (-541.929) (-538.786) (-553.064) * (-553.042) (-526.900) (-545.653) [-511.514] -- 0:04:02
417000 -- [-514.268] (-553.328) (-547.580) (-546.101) * (-546.512) (-512.502) (-546.471) [-514.382] -- 0:04:03
418000 -- [-523.756] (-551.976) (-548.033) (-544.608) * (-553.959) (-527.089) (-544.351) [-506.103] -- 0:04:02
419000 -- [-517.696] (-540.264) (-545.174) (-549.588) * (-541.399) (-520.010) (-548.742) [-525.994] -- 0:04:02
420000 -- [-513.535] (-546.678) (-547.889) (-550.177) * (-543.703) (-525.401) (-556.529) [-516.076] -- 0:04:01
Average standard deviation of split frequencies: 0.015689
421000 -- [-525.556] (-548.001) (-553.555) (-551.519) * (-550.165) (-517.956) (-557.379) [-518.373] -- 0:04:00
422000 -- [-519.956] (-556.112) (-541.686) (-553.648) * (-549.714) [-522.068] (-546.531) (-522.874) -- 0:04:01
423000 -- [-515.671] (-556.020) (-543.648) (-555.799) * (-560.997) [-506.359] (-542.033) (-518.008) -- 0:04:00
424000 -- [-514.781] (-549.551) (-551.748) (-548.231) * (-542.346) [-511.910] (-555.555) (-522.755) -- 0:04:00
425000 -- [-516.835] (-535.956) (-553.037) (-545.674) * (-549.859) [-516.076] (-551.719) (-516.850) -- 0:03:59
Average standard deviation of split frequencies: 0.016924
426000 -- [-509.767] (-545.812) (-557.173) (-548.860) * (-552.106) (-515.575) (-551.151) [-516.409] -- 0:03:59
427000 -- [-523.555] (-545.615) (-555.437) (-547.693) * (-557.707) [-511.009] (-563.710) (-509.542) -- 0:03:58
428000 -- [-523.699] (-548.836) (-555.111) (-543.582) * (-545.396) [-514.583] (-550.553) (-514.316) -- 0:03:57
429000 -- [-527.033] (-548.507) (-555.485) (-560.829) * (-549.237) [-511.015] (-557.669) (-514.685) -- 0:03:58
430000 -- [-513.365] (-542.067) (-558.119) (-553.795) * (-550.880) [-518.616] (-553.560) (-515.799) -- 0:03:57
Average standard deviation of split frequencies: 0.018222
431000 -- [-519.001] (-549.197) (-550.477) (-541.985) * (-549.255) [-513.939] (-548.493) (-520.860) -- 0:03:57
432000 -- [-516.848] (-559.409) (-550.426) (-545.948) * (-558.983) [-512.640] (-541.697) (-513.759) -- 0:03:56
433000 -- [-514.171] (-553.402) (-549.938) (-541.075) * (-553.434) [-515.980] (-546.341) (-516.447) -- 0:03:57
434000 -- [-520.684] (-548.679) (-560.941) (-549.469) * (-546.054) [-517.440] (-549.063) (-529.097) -- 0:03:56
435000 -- [-514.964] (-547.190) (-550.375) (-547.315) * (-546.831) [-514.933] (-551.494) (-531.051) -- 0:03:55
Average standard deviation of split frequencies: 0.018126
436000 -- [-513.430] (-556.111) (-539.644) (-534.911) * (-541.197) [-506.558] (-546.832) (-513.879) -- 0:03:55
437000 -- [-511.701] (-550.501) (-550.377) (-550.714) * (-549.383) [-521.409] (-558.884) (-520.581) -- 0:03:54
438000 -- [-514.757] (-551.936) (-555.661) (-542.320) * (-549.077) [-517.836] (-554.380) (-517.400) -- 0:03:54
439000 -- [-516.186] (-542.433) (-558.890) (-541.387) * (-552.913) (-519.320) (-554.133) [-509.474] -- 0:03:53
440000 -- [-517.437] (-550.094) (-556.650) (-544.173) * (-547.738) [-516.494] (-558.154) (-512.574) -- 0:03:52
Average standard deviation of split frequencies: 0.018123
441000 -- [-512.511] (-548.592) (-561.572) (-548.788) * (-538.381) [-509.072] (-557.182) (-516.802) -- 0:03:53
442000 -- [-515.266] (-565.442) (-546.678) (-556.641) * (-556.315) (-510.797) (-556.365) [-512.497] -- 0:03:52
443000 -- [-512.512] (-541.850) (-544.180) (-560.301) * (-549.453) (-522.740) (-557.355) [-522.014] -- 0:03:52
444000 -- [-518.599] (-544.389) (-542.846) (-550.539) * (-557.788) (-528.595) (-566.814) [-519.866] -- 0:03:51
445000 -- [-516.893] (-549.859) (-543.432) (-546.853) * (-550.606) (-524.133) (-549.442) [-516.665] -- 0:03:50
Average standard deviation of split frequencies: 0.017160
446000 -- [-518.651] (-545.333) (-550.454) (-554.453) * (-551.629) (-526.659) (-553.470) [-522.839] -- 0:03:51
447000 -- [-508.199] (-551.965) (-544.559) (-545.227) * (-541.680) (-523.408) (-553.374) [-520.108] -- 0:03:50
448000 -- [-513.144] (-546.331) (-550.754) (-547.639) * (-546.112) (-527.036) (-549.652) [-529.669] -- 0:03:50
449000 -- [-522.914] (-557.850) (-559.237) (-543.754) * (-543.614) (-527.576) (-551.947) [-517.828] -- 0:03:49
450000 -- [-521.476] (-551.885) (-560.904) (-539.321) * (-540.747) [-517.954] (-554.028) (-517.029) -- 0:03:49
Average standard deviation of split frequencies: 0.015752
451000 -- [-521.548] (-556.211) (-553.495) (-541.562) * (-550.112) (-513.578) (-553.210) [-505.506] -- 0:03:48
452000 -- [-517.940] (-560.552) (-542.324) (-536.902) * (-547.293) [-519.075] (-546.173) (-513.385) -- 0:03:47
453000 -- [-519.049] (-552.596) (-542.065) (-545.842) * (-541.575) [-520.123] (-553.221) (-511.037) -- 0:03:48
454000 -- [-517.101] (-546.282) (-549.137) (-545.869) * (-549.159) (-531.303) (-549.463) [-515.860] -- 0:03:47
455000 -- [-518.629] (-551.976) (-546.481) (-547.656) * (-544.672) [-523.139] (-546.226) (-525.623) -- 0:03:47
Average standard deviation of split frequencies: 0.015203
456000 -- [-515.009] (-552.062) (-541.777) (-539.198) * (-543.648) (-520.010) (-556.657) [-511.727] -- 0:03:46
457000 -- [-514.915] (-549.179) (-537.581) (-547.263) * (-544.148) [-521.575] (-563.220) (-524.824) -- 0:03:45
458000 -- [-521.608] (-551.482) (-533.980) (-542.511) * (-545.266) [-521.026] (-541.285) (-512.629) -- 0:03:46
459000 -- [-522.361] (-553.252) (-552.555) (-543.452) * (-544.750) (-526.865) (-548.453) [-511.569] -- 0:03:45
460000 -- [-510.873] (-555.349) (-542.490) (-547.881) * (-540.547) [-510.711] (-545.547) (-530.654) -- 0:03:45
Average standard deviation of split frequencies: 0.015470
461000 -- [-506.611] (-545.029) (-550.985) (-544.776) * (-555.632) [-514.993] (-557.902) (-524.640) -- 0:03:44
462000 -- [-513.779] (-537.521) (-551.558) (-549.625) * (-552.332) (-524.044) (-552.918) [-516.361] -- 0:03:43
463000 -- [-520.126] (-538.372) (-541.203) (-540.128) * (-540.885) [-516.969] (-555.285) (-537.274) -- 0:03:43
464000 -- [-520.481] (-547.846) (-537.084) (-540.363) * (-540.930) (-522.589) (-553.799) [-508.793] -- 0:03:42
465000 -- [-526.486] (-538.057) (-541.286) (-545.640) * (-549.007) (-524.653) (-559.143) [-519.028] -- 0:03:43
Average standard deviation of split frequencies: 0.015650
466000 -- [-526.251] (-551.211) (-548.992) (-552.181) * (-540.415) (-516.896) (-554.582) [-515.616] -- 0:03:42
467000 -- [-513.659] (-556.475) (-544.747) (-552.498) * (-539.702) (-518.692) (-552.740) [-514.211] -- 0:03:41
468000 -- [-513.151] (-549.265) (-547.161) (-565.654) * (-545.026) (-520.483) (-545.879) [-514.636] -- 0:03:41
469000 -- [-512.851] (-546.279) (-546.798) (-552.987) * (-556.333) (-519.367) (-547.909) [-517.955] -- 0:03:40
470000 -- [-511.402] (-545.153) (-539.973) (-555.748) * (-545.913) [-515.211] (-546.001) (-515.461) -- 0:03:41
Average standard deviation of split frequencies: 0.015731
471000 -- [-516.495] (-546.477) (-533.891) (-553.731) * (-539.733) [-517.419] (-551.237) (-512.283) -- 0:03:40
472000 -- [-511.662] (-564.385) (-546.406) (-543.338) * (-541.955) [-515.086] (-557.132) (-521.734) -- 0:03:39
473000 -- [-512.339] (-545.898) (-544.399) (-557.915) * (-547.179) [-511.053] (-553.265) (-522.520) -- 0:03:39
474000 -- [-528.815] (-552.059) (-552.610) (-540.321) * (-545.242) [-512.259] (-543.911) (-515.901) -- 0:03:38
475000 -- [-510.681] (-554.299) (-541.527) (-538.628) * (-543.921) [-510.685] (-555.413) (-517.526) -- 0:03:38
Average standard deviation of split frequencies: 0.015379
476000 -- [-510.249] (-556.664) (-538.188) (-550.529) * (-550.490) (-522.570) (-551.168) [-511.682] -- 0:03:37
477000 -- [-517.932] (-553.176) (-549.646) (-545.677) * (-541.261) (-525.490) (-547.902) [-508.316] -- 0:03:38
478000 -- [-515.817] (-547.885) (-554.500) (-544.223) * (-551.329) [-514.414] (-559.369) (-512.795) -- 0:03:37
479000 -- [-518.682] (-543.890) (-540.672) (-547.806) * (-561.153) [-512.780] (-551.870) (-513.123) -- 0:03:36
480000 -- [-517.524] (-542.052) (-539.557) (-552.902) * (-554.382) (-517.293) (-550.401) [-506.418] -- 0:03:36
Average standard deviation of split frequencies: 0.014884
481000 -- [-517.404] (-551.788) (-548.113) (-539.667) * (-556.781) [-508.277] (-556.639) (-514.603) -- 0:03:35
482000 -- [-522.887] (-554.189) (-541.385) (-540.234) * (-553.298) [-518.355] (-548.935) (-516.455) -- 0:03:36
483000 -- [-519.217] (-546.186) (-544.595) (-541.305) * (-539.263) [-522.678] (-538.724) (-516.929) -- 0:03:35
484000 -- [-522.706] (-549.590) (-554.736) (-548.009) * (-553.184) [-512.955] (-545.356) (-520.460) -- 0:03:34
485000 -- [-517.968] (-533.862) (-548.915) (-550.192) * (-543.337) [-509.849] (-553.056) (-515.392) -- 0:03:34
Average standard deviation of split frequencies: 0.015291
486000 -- (-527.015) [-521.800] (-542.129) (-552.534) * (-551.443) [-509.610] (-555.515) (-521.452) -- 0:03:33
487000 -- [-511.820] (-526.647) (-540.011) (-560.832) * (-541.657) [-515.392] (-552.755) (-525.207) -- 0:03:33
488000 -- (-513.964) [-509.527] (-545.074) (-552.813) * (-551.856) [-509.929] (-550.411) (-533.002) -- 0:03:32
489000 -- [-516.954] (-521.470) (-541.622) (-551.447) * (-540.324) (-519.669) (-546.687) [-525.415] -- 0:03:32
490000 -- [-520.116] (-523.810) (-546.949) (-551.459) * (-551.161) (-520.777) (-556.539) [-523.232] -- 0:03:32
Average standard deviation of split frequencies: 0.014920
491000 -- [-514.305] (-519.273) (-551.404) (-552.279) * (-557.903) (-526.991) (-555.543) [-517.052] -- 0:03:31
492000 -- [-511.075] (-531.748) (-542.820) (-541.633) * (-548.731) (-526.593) (-542.789) [-518.341] -- 0:03:31
493000 -- (-518.737) [-515.179] (-540.736) (-553.995) * (-559.901) (-517.891) (-546.678) [-510.102] -- 0:03:30
494000 -- [-514.004] (-514.797) (-548.009) (-548.690) * (-542.506) (-522.455) (-552.397) [-510.700] -- 0:03:29
495000 -- (-518.463) [-520.818] (-549.358) (-557.012) * (-540.023) (-517.313) (-545.538) [-511.165] -- 0:03:30
Average standard deviation of split frequencies: 0.014927
496000 -- [-514.902] (-532.936) (-551.818) (-549.654) * (-560.864) (-515.702) (-554.166) [-511.846] -- 0:03:29
497000 -- [-508.879] (-521.878) (-548.919) (-552.501) * (-556.444) [-513.267] (-556.914) (-516.125) -- 0:03:29
498000 -- [-506.750] (-520.798) (-545.644) (-553.941) * (-550.021) (-518.384) (-557.347) [-512.814] -- 0:03:28
499000 -- [-513.035] (-527.864) (-549.447) (-543.287) * (-548.612) [-524.263] (-556.416) (-523.268) -- 0:03:28
500000 -- [-512.821] (-525.861) (-547.847) (-550.222) * (-541.031) [-521.881] (-550.147) (-542.825) -- 0:03:28
Average standard deviation of split frequencies: 0.014456
501000 -- [-518.598] (-527.223) (-545.839) (-539.778) * (-542.945) [-525.487] (-557.645) (-519.548) -- 0:03:27
502000 -- (-516.642) [-514.312] (-538.954) (-540.466) * (-551.319) [-516.895] (-554.630) (-526.986) -- 0:03:27
503000 -- [-522.090] (-517.622) (-548.521) (-535.805) * (-547.544) (-534.128) (-554.037) [-521.501] -- 0:03:26
504000 -- [-515.416] (-514.739) (-545.525) (-550.721) * (-546.982) [-515.203] (-548.533) (-527.086) -- 0:03:26
505000 -- [-511.073] (-518.884) (-539.331) (-545.724) * (-551.515) (-517.706) (-546.086) [-522.934] -- 0:03:25
Average standard deviation of split frequencies: 0.014906
506000 -- (-507.755) [-516.859] (-546.847) (-543.655) * (-544.712) [-510.782] (-549.892) (-513.606) -- 0:03:25
507000 -- [-517.946] (-514.222) (-551.519) (-549.361) * (-546.648) [-514.716] (-562.168) (-521.214) -- 0:03:25
508000 -- [-515.716] (-514.502) (-547.262) (-548.263) * (-558.230) [-520.973] (-564.643) (-518.817) -- 0:03:24
509000 -- [-512.604] (-528.345) (-537.162) (-552.780) * (-551.066) [-519.118] (-560.129) (-515.814) -- 0:03:24
510000 -- [-514.794] (-529.916) (-546.125) (-546.198) * (-540.148) [-509.442] (-555.354) (-520.524) -- 0:03:23
Average standard deviation of split frequencies: 0.014064
511000 -- [-514.187] (-521.686) (-543.394) (-544.755) * (-548.297) (-508.199) (-556.590) [-515.747] -- 0:03:22
512000 -- [-510.170] (-517.036) (-549.522) (-549.083) * (-551.583) [-511.559] (-555.880) (-523.433) -- 0:03:23
513000 -- [-520.209] (-526.732) (-547.713) (-544.047) * (-546.275) (-524.222) (-548.332) [-521.882] -- 0:03:22
514000 -- (-516.181) [-526.260] (-544.842) (-544.972) * (-554.316) (-523.119) (-558.463) [-513.326] -- 0:03:22
515000 -- (-527.952) [-508.606] (-540.084) (-542.676) * (-554.434) (-522.081) (-558.404) [-519.906] -- 0:03:21
Average standard deviation of split frequencies: 0.013596
516000 -- (-520.725) [-519.809] (-549.973) (-545.816) * (-552.966) [-521.117] (-546.503) (-520.346) -- 0:03:21
517000 -- [-524.212] (-519.021) (-553.730) (-539.685) * (-554.595) [-515.436] (-562.088) (-518.937) -- 0:03:20
518000 -- [-515.388] (-516.304) (-547.378) (-543.421) * (-551.831) [-514.026] (-541.345) (-526.809) -- 0:03:20
519000 -- [-511.316] (-519.512) (-547.451) (-547.938) * (-546.539) (-519.176) (-554.736) [-521.897] -- 0:03:20
520000 -- [-516.694] (-522.577) (-554.198) (-556.724) * (-556.566) [-517.799] (-550.076) (-520.060) -- 0:03:19
Average standard deviation of split frequencies: 0.014326
521000 -- (-531.561) [-515.842] (-545.913) (-548.216) * (-559.862) [-516.826] (-552.384) (-517.338) -- 0:03:19
522000 -- [-520.072] (-519.783) (-556.390) (-544.913) * (-549.204) (-521.386) (-554.759) [-518.063] -- 0:03:18
523000 -- [-513.019] (-521.573) (-552.609) (-541.303) * (-546.875) [-508.537] (-548.647) (-528.579) -- 0:03:17
524000 -- [-522.378] (-517.078) (-546.432) (-546.339) * (-558.536) [-510.866] (-554.862) (-522.443) -- 0:03:18
525000 -- (-517.766) [-519.439] (-550.440) (-550.354) * (-540.803) (-514.057) (-549.959) [-519.512] -- 0:03:17
Average standard deviation of split frequencies: 0.014656
526000 -- (-525.073) [-511.245] (-546.880) (-550.955) * (-543.587) (-515.938) (-545.098) [-516.570] -- 0:03:17
527000 -- (-519.694) [-513.269] (-561.618) (-551.316) * (-542.975) (-513.903) (-546.127) [-526.055] -- 0:03:16
528000 -- (-522.513) [-514.557] (-557.976) (-548.774) * (-554.797) (-528.890) (-548.448) [-510.168] -- 0:03:15
529000 -- (-523.594) [-514.749] (-553.620) (-549.657) * (-540.483) (-525.527) (-547.566) [-508.957] -- 0:03:15
530000 -- [-514.329] (-518.296) (-553.913) (-545.273) * (-561.708) [-519.298] (-542.595) (-508.629) -- 0:03:15
Average standard deviation of split frequencies: 0.015154
531000 -- [-515.650] (-520.963) (-546.095) (-559.227) * (-546.856) (-520.296) (-546.978) [-516.352] -- 0:03:15
532000 -- (-526.579) [-515.221] (-552.326) (-550.866) * (-542.937) (-511.539) (-545.753) [-507.327] -- 0:03:14
533000 -- [-512.509] (-511.618) (-555.831) (-557.415) * (-545.813) (-519.748) (-540.594) [-511.014] -- 0:03:14
534000 -- [-512.876] (-517.886) (-551.635) (-555.244) * (-550.415) [-515.984] (-545.122) (-514.974) -- 0:03:13
535000 -- [-516.502] (-514.729) (-549.963) (-545.149) * (-543.333) [-516.827] (-554.425) (-516.662) -- 0:03:12
Average standard deviation of split frequencies: 0.015934
536000 -- [-514.028] (-519.098) (-545.510) (-549.442) * (-547.781) [-515.727] (-548.712) (-512.446) -- 0:03:13
537000 -- [-511.007] (-513.161) (-539.936) (-543.607) * (-549.775) (-509.504) (-545.942) [-510.914] -- 0:03:12
538000 -- (-522.318) [-518.557] (-556.453) (-549.218) * (-545.786) (-508.633) (-553.498) [-511.800] -- 0:03:12
539000 -- [-513.021] (-511.893) (-547.668) (-540.045) * (-542.597) [-510.763] (-551.112) (-516.570) -- 0:03:11
540000 -- [-520.253] (-514.142) (-552.433) (-542.141) * (-545.729) [-507.606] (-552.161) (-520.004) -- 0:03:10
Average standard deviation of split frequencies: 0.015130
541000 -- [-515.407] (-523.423) (-548.034) (-542.330) * (-555.771) (-521.816) (-559.719) [-521.637] -- 0:03:10
542000 -- (-515.778) [-518.043] (-547.836) (-545.735) * (-546.466) [-511.967] (-551.439) (-518.237) -- 0:03:10
543000 -- [-523.417] (-514.922) (-547.709) (-551.894) * (-556.925) [-512.875] (-557.378) (-514.574) -- 0:03:10
544000 -- [-515.605] (-532.665) (-551.943) (-549.961) * (-545.964) [-511.611] (-550.239) (-522.441) -- 0:03:09
545000 -- (-517.850) [-518.484] (-553.820) (-554.184) * (-545.262) [-510.379] (-559.778) (-526.405) -- 0:03:08
Average standard deviation of split frequencies: 0.015185
546000 -- [-518.308] (-523.749) (-561.036) (-546.052) * (-549.896) [-510.983] (-546.564) (-521.154) -- 0:03:08
547000 -- [-521.164] (-522.586) (-560.644) (-535.097) * (-548.183) [-517.158] (-551.439) (-517.503) -- 0:03:07
548000 -- (-516.523) [-519.744] (-549.737) (-544.723) * (-540.407) (-521.312) (-551.873) [-513.487] -- 0:03:08
549000 -- (-517.847) [-511.179] (-554.476) (-547.029) * (-542.565) [-516.824] (-548.800) (-516.039) -- 0:03:07
550000 -- [-522.883] (-527.787) (-556.321) (-543.282) * (-553.796) (-520.474) (-554.690) [-515.005] -- 0:03:06
Average standard deviation of split frequencies: 0.015611
551000 -- [-516.705] (-525.004) (-546.126) (-542.251) * (-550.352) [-514.320] (-550.487) (-524.780) -- 0:03:06
552000 -- [-514.287] (-514.202) (-551.977) (-547.894) * (-543.935) [-520.742] (-545.736) (-531.390) -- 0:03:05
553000 -- [-517.061] (-531.277) (-544.013) (-547.680) * (-547.717) [-517.094] (-553.635) (-534.212) -- 0:03:05
554000 -- [-514.362] (-525.115) (-553.231) (-552.019) * (-558.583) [-522.355] (-552.982) (-529.215) -- 0:03:05
555000 -- [-510.987] (-518.214) (-541.617) (-545.173) * (-545.315) [-512.714] (-545.048) (-525.033) -- 0:03:05
Average standard deviation of split frequencies: 0.014164
556000 -- [-517.215] (-520.827) (-546.344) (-547.313) * (-548.843) [-508.907] (-549.690) (-517.966) -- 0:03:04
557000 -- (-519.963) [-515.890] (-550.830) (-556.920) * (-555.716) (-521.783) (-553.974) [-525.900] -- 0:03:03
558000 -- (-523.506) [-513.520] (-557.283) (-545.623) * (-542.110) [-518.591] (-542.869) (-517.813) -- 0:03:03
559000 -- [-515.251] (-515.549) (-551.855) (-540.801) * (-541.056) [-523.651] (-551.190) (-529.773) -- 0:03:03
560000 -- [-511.972] (-528.454) (-551.154) (-545.089) * (-542.064) [-514.040] (-549.296) (-519.876) -- 0:03:03
Average standard deviation of split frequencies: 0.011919
561000 -- (-527.236) [-520.306] (-541.025) (-553.776) * (-536.032) [-509.413] (-542.826) (-517.470) -- 0:03:02
562000 -- (-515.821) [-515.511] (-540.502) (-551.835) * (-550.531) [-514.627] (-546.179) (-519.590) -- 0:03:02
563000 -- [-520.339] (-519.651) (-542.142) (-547.475) * (-554.011) [-514.629] (-555.489) (-528.552) -- 0:03:01
564000 -- [-516.322] (-511.383) (-538.401) (-558.609) * (-552.753) (-526.487) (-546.423) [-512.385] -- 0:03:00
565000 -- [-513.074] (-507.597) (-548.776) (-547.444) * (-541.773) [-520.539] (-545.208) (-524.128) -- 0:03:00
Average standard deviation of split frequencies: 0.011611
566000 -- [-521.720] (-519.169) (-554.157) (-540.683) * (-547.871) [-520.653] (-549.755) (-534.754) -- 0:03:00
567000 -- (-524.825) [-511.659] (-547.540) (-539.812) * (-553.334) (-522.689) (-574.122) [-520.357] -- 0:03:00
568000 -- (-525.741) [-519.294] (-539.316) (-548.486) * (-543.188) [-513.038] (-554.034) (-520.083) -- 0:02:59
569000 -- (-519.533) [-513.292] (-544.234) (-537.460) * (-543.014) [-508.940] (-547.824) (-518.246) -- 0:02:58
570000 -- (-520.142) [-513.609] (-563.965) (-548.348) * (-546.678) [-515.159] (-542.759) (-517.344) -- 0:02:58
Average standard deviation of split frequencies: 0.010836
571000 -- (-524.725) [-519.716] (-556.833) (-548.606) * (-545.531) (-514.065) (-548.555) [-519.096] -- 0:02:58
572000 -- [-517.909] (-517.890) (-547.100) (-544.176) * (-550.303) (-520.003) (-541.394) [-508.063] -- 0:02:58
573000 -- (-522.784) [-512.174] (-546.965) (-550.435) * (-542.580) [-514.928] (-548.578) (-518.242) -- 0:02:57
574000 -- (-523.171) [-509.343] (-547.453) (-544.380) * (-540.366) [-513.813] (-555.415) (-519.482) -- 0:02:57
575000 -- (-519.952) [-509.232] (-539.444) (-541.846) * (-549.643) [-518.348] (-550.109) (-528.005) -- 0:02:56
Average standard deviation of split frequencies: 0.011509
576000 -- (-520.885) [-508.329] (-536.583) (-535.855) * (-548.941) [-509.398] (-561.381) (-521.174) -- 0:02:55
577000 -- (-526.753) [-511.048] (-540.093) (-550.710) * (-545.042) (-518.000) (-549.956) [-523.363] -- 0:02:55
578000 -- (-531.749) [-512.332] (-552.822) (-542.766) * (-554.734) (-512.180) (-556.738) [-516.156] -- 0:02:55
579000 -- (-519.942) [-510.835] (-559.493) (-553.607) * (-540.677) [-517.995] (-558.573) (-520.964) -- 0:02:55
580000 -- [-519.291] (-517.517) (-545.609) (-540.594) * (-549.514) [-525.183] (-549.851) (-517.630) -- 0:02:54
Average standard deviation of split frequencies: 0.011975
581000 -- (-531.846) [-513.667] (-540.871) (-544.962) * (-544.050) (-515.860) (-552.764) [-507.321] -- 0:02:53
582000 -- [-514.171] (-514.091) (-555.560) (-553.406) * (-550.670) (-518.866) (-542.245) [-522.507] -- 0:02:53
583000 -- [-516.551] (-523.685) (-558.895) (-554.676) * (-545.387) (-521.452) (-554.889) [-513.416] -- 0:02:53
584000 -- [-516.184] (-522.235) (-534.659) (-558.344) * (-556.229) (-522.547) (-546.080) [-514.334] -- 0:02:53
585000 -- [-516.176] (-517.470) (-548.601) (-551.753) * (-555.776) [-521.562] (-549.474) (-513.746) -- 0:02:52
Average standard deviation of split frequencies: 0.011011
586000 -- [-517.810] (-516.926) (-551.956) (-546.999) * (-557.565) [-522.548] (-553.139) (-532.910) -- 0:02:52
587000 -- [-512.476] (-524.458) (-542.207) (-551.889) * (-547.454) (-512.499) (-554.473) [-514.939] -- 0:02:51
588000 -- (-527.229) [-520.350] (-548.379) (-554.185) * (-545.710) (-512.310) (-549.994) [-516.995] -- 0:02:50
589000 -- (-518.639) [-521.350] (-545.055) (-544.248) * (-544.220) (-511.425) (-548.288) [-516.363] -- 0:02:50
590000 -- (-527.275) [-519.275] (-548.661) (-545.239) * (-547.863) [-511.868] (-546.080) (-516.655) -- 0:02:50
Average standard deviation of split frequencies: 0.011024
591000 -- [-521.435] (-537.496) (-549.418) (-549.282) * (-540.915) (-524.936) (-547.812) [-514.431] -- 0:02:50
592000 -- [-515.459] (-531.633) (-547.135) (-548.812) * (-553.612) [-510.097] (-551.848) (-523.301) -- 0:02:49
593000 -- [-514.089] (-518.540) (-533.439) (-555.832) * (-551.410) [-508.904] (-539.326) (-532.229) -- 0:02:48
594000 -- [-517.405] (-526.280) (-537.337) (-546.141) * (-567.669) (-511.124) (-545.578) [-517.844] -- 0:02:48
595000 -- [-511.597] (-516.801) (-538.513) (-541.825) * (-560.248) (-522.311) (-546.529) [-517.462] -- 0:02:48
Average standard deviation of split frequencies: 0.010579
596000 -- (-520.327) [-514.665] (-541.608) (-544.216) * (-548.068) [-516.759] (-543.915) (-531.063) -- 0:02:48
597000 -- [-518.994] (-525.023) (-541.402) (-546.320) * (-549.720) (-526.913) (-545.667) [-520.437] -- 0:02:47
598000 -- [-513.339] (-533.105) (-551.792) (-543.091) * (-546.004) [-520.481] (-550.140) (-514.661) -- 0:02:47
599000 -- [-505.605] (-521.586) (-542.391) (-556.698) * (-544.815) [-518.137] (-559.612) (-518.115) -- 0:02:46
600000 -- [-513.428] (-523.412) (-548.440) (-551.836) * (-563.337) [-518.943] (-550.855) (-512.003) -- 0:02:46
Average standard deviation of split frequencies: 0.012508
601000 -- [-516.162] (-528.593) (-538.891) (-540.843) * (-544.559) (-524.233) (-564.578) [-517.262] -- 0:02:45
602000 -- [-509.543] (-523.661) (-541.589) (-535.698) * (-547.383) (-526.804) (-559.784) [-517.177] -- 0:02:45
603000 -- [-516.129] (-537.861) (-542.299) (-547.580) * (-545.137) (-517.749) (-560.552) [-511.637] -- 0:02:45
604000 -- [-519.278] (-527.740) (-545.841) (-550.849) * (-547.714) (-517.649) (-555.374) [-513.971] -- 0:02:44
605000 -- [-521.625] (-520.334) (-545.340) (-545.655) * (-546.546) [-512.978] (-551.318) (-525.064) -- 0:02:43
Average standard deviation of split frequencies: 0.014488
606000 -- [-511.240] (-511.865) (-545.411) (-548.039) * (-546.203) (-512.582) (-556.299) [-515.827] -- 0:02:43
607000 -- [-513.028] (-527.610) (-549.037) (-546.890) * (-545.359) [-515.458] (-552.012) (-523.302) -- 0:02:43
608000 -- [-513.063] (-518.756) (-540.642) (-555.169) * (-548.749) [-521.537] (-555.819) (-526.209) -- 0:02:43
609000 -- [-516.427] (-526.263) (-544.894) (-546.324) * (-541.339) [-513.546] (-545.709) (-519.937) -- 0:02:42
610000 -- [-518.010] (-517.138) (-545.857) (-552.919) * (-546.184) [-513.981] (-546.472) (-515.763) -- 0:02:42
Average standard deviation of split frequencies: 0.013509
611000 -- [-515.685] (-519.856) (-538.495) (-546.911) * (-540.522) [-510.488] (-546.249) (-519.067) -- 0:02:41
612000 -- (-520.068) [-516.390] (-551.518) (-541.281) * (-547.428) [-509.055] (-550.389) (-525.068) -- 0:02:41
613000 -- [-516.341] (-519.298) (-551.998) (-546.790) * (-539.382) [-506.206] (-545.916) (-516.292) -- 0:02:40
614000 -- [-530.417] (-515.657) (-556.185) (-555.795) * (-546.082) [-507.253] (-551.551) (-522.057) -- 0:02:40
615000 -- [-523.842] (-524.447) (-539.749) (-542.923) * (-546.416) [-511.434] (-558.067) (-519.956) -- 0:02:40
Average standard deviation of split frequencies: 0.014301
616000 -- [-514.825] (-525.905) (-549.414) (-538.080) * (-553.054) [-510.730] (-549.339) (-510.981) -- 0:02:39
617000 -- (-524.484) [-520.030] (-538.490) (-545.864) * (-545.735) [-519.063] (-558.825) (-519.778) -- 0:02:38
618000 -- (-523.628) [-518.048] (-540.233) (-540.207) * (-545.525) (-529.238) (-556.432) [-523.583] -- 0:02:38
619000 -- (-517.793) [-512.806] (-561.344) (-554.038) * (-553.312) (-525.881) (-543.473) [-513.033] -- 0:02:38
620000 -- [-517.967] (-520.632) (-551.423) (-558.961) * (-544.912) [-519.115] (-551.376) (-515.912) -- 0:02:38
Average standard deviation of split frequencies: 0.013102
621000 -- (-519.793) [-517.639] (-547.952) (-559.075) * (-548.755) (-516.116) (-553.898) [-516.975] -- 0:02:37
622000 -- [-509.601] (-516.133) (-544.705) (-554.402) * (-552.591) [-517.697] (-558.314) (-522.395) -- 0:02:37
623000 -- [-514.001] (-516.172) (-553.324) (-551.915) * (-539.079) (-538.348) (-551.390) [-524.239] -- 0:02:36
624000 -- (-518.042) [-517.072] (-555.582) (-544.888) * (-546.658) (-523.307) (-558.353) [-508.318] -- 0:02:36
625000 -- [-515.967] (-517.230) (-559.976) (-541.314) * (-548.740) (-518.981) (-551.044) [-515.345] -- 0:02:36
Average standard deviation of split frequencies: 0.013272
626000 -- [-515.392] (-517.258) (-547.291) (-543.259) * (-541.664) [-511.470] (-554.007) (-521.581) -- 0:02:35
627000 -- [-513.327] (-521.734) (-553.668) (-560.745) * (-551.071) [-512.009] (-544.881) (-513.438) -- 0:02:35
628000 -- (-519.409) [-529.383] (-546.495) (-553.330) * (-543.448) (-518.842) (-547.841) [-513.965] -- 0:02:34
629000 -- [-523.069] (-540.839) (-545.988) (-542.799) * (-550.618) [-520.921] (-546.062) (-513.951) -- 0:02:33
630000 -- (-522.150) [-527.972] (-554.235) (-541.425) * (-555.817) (-528.627) (-545.520) [-505.709] -- 0:02:33
Average standard deviation of split frequencies: 0.013174
631000 -- [-512.109] (-526.049) (-546.805) (-556.175) * (-557.094) (-519.170) (-546.250) [-509.789] -- 0:02:33
632000 -- [-513.593] (-529.004) (-545.463) (-541.316) * (-557.382) (-521.422) (-549.275) [-509.649] -- 0:02:33
633000 -- (-520.659) [-518.936] (-548.255) (-547.746) * (-546.188) (-522.494) (-548.931) [-524.231] -- 0:02:32
634000 -- [-510.564] (-520.654) (-545.077) (-549.884) * (-554.132) (-519.762) (-550.878) [-516.187] -- 0:02:31
635000 -- (-515.477) [-524.649] (-543.830) (-543.131) * (-544.540) (-526.268) (-549.217) [-518.671] -- 0:02:31
Average standard deviation of split frequencies: 0.013481
636000 -- [-517.364] (-522.585) (-552.285) (-543.959) * (-540.095) (-523.976) (-551.155) [-514.889] -- 0:02:31
637000 -- (-509.685) [-525.434] (-543.500) (-537.115) * (-553.018) [-523.179] (-548.403) (-528.755) -- 0:02:31
638000 -- [-514.615] (-524.321) (-542.737) (-551.146) * (-547.449) (-517.342) (-548.183) [-517.640] -- 0:02:30
639000 -- [-509.070] (-519.212) (-549.537) (-558.476) * (-539.560) (-523.070) (-554.549) [-509.718] -- 0:02:30
640000 -- [-510.782] (-520.035) (-548.082) (-548.018) * (-556.828) (-520.886) (-553.437) [-516.947] -- 0:02:29
Average standard deviation of split frequencies: 0.013015
641000 -- (-518.999) [-517.373] (-544.056) (-540.008) * (-541.041) (-516.300) (-537.439) [-515.395] -- 0:02:28
642000 -- (-525.748) [-511.704] (-543.500) (-540.904) * (-547.645) (-519.697) (-548.532) [-516.586] -- 0:02:28
643000 -- (-525.561) [-505.626] (-544.011) (-551.094) * (-550.878) (-524.501) (-558.418) [-522.335] -- 0:02:28
644000 -- [-515.619] (-521.728) (-540.796) (-552.046) * (-546.985) (-513.476) (-553.391) [-514.703] -- 0:02:28
645000 -- [-525.892] (-525.136) (-545.579) (-555.316) * (-551.042) [-515.564] (-554.141) (-518.510) -- 0:02:27
Average standard deviation of split frequencies: 0.012041
646000 -- [-507.504] (-519.460) (-547.553) (-557.749) * (-545.517) (-517.729) (-541.461) [-519.246] -- 0:02:26
647000 -- (-514.072) [-518.930] (-553.987) (-542.612) * (-539.260) [-522.578] (-553.162) (-525.352) -- 0:02:26
648000 -- [-512.657] (-512.120) (-544.897) (-543.650) * (-547.679) [-509.710] (-553.798) (-520.328) -- 0:02:26
649000 -- (-517.007) [-517.370] (-539.152) (-549.470) * (-543.308) [-511.450] (-558.974) (-532.479) -- 0:02:26
650000 -- (-514.884) [-520.683] (-548.068) (-544.819) * (-541.711) [-511.031] (-545.910) (-530.896) -- 0:02:25
Average standard deviation of split frequencies: 0.012045
651000 -- [-504.947] (-509.602) (-549.939) (-560.341) * (-551.953) [-507.636] (-554.757) (-531.941) -- 0:02:24
652000 -- (-514.826) [-514.740] (-557.754) (-538.549) * (-546.585) [-514.068] (-550.009) (-523.339) -- 0:02:24
653000 -- [-512.705] (-520.178) (-545.652) (-554.405) * (-539.422) [-508.539] (-552.542) (-527.965) -- 0:02:24
654000 -- [-514.233] (-522.891) (-546.426) (-544.891) * (-551.673) [-515.227] (-550.377) (-519.233) -- 0:02:23
655000 -- (-530.865) [-519.583] (-550.112) (-548.161) * (-542.231) [-515.480] (-548.763) (-514.175) -- 0:02:23
Average standard deviation of split frequencies: 0.012486
656000 -- [-519.343] (-522.820) (-541.799) (-548.538) * (-548.682) [-512.073] (-562.315) (-530.305) -- 0:02:23
657000 -- [-523.099] (-523.038) (-543.912) (-547.209) * (-545.383) (-509.418) (-550.485) [-518.264] -- 0:02:22
658000 -- (-523.339) [-517.107] (-545.340) (-552.850) * (-542.481) (-522.246) (-551.584) [-522.602] -- 0:02:21
659000 -- (-516.173) [-517.597] (-549.733) (-546.251) * (-548.902) (-524.154) (-546.798) [-509.753] -- 0:02:21
660000 -- [-516.823] (-527.382) (-548.549) (-546.170) * (-549.898) (-514.749) (-549.723) [-517.673] -- 0:02:21
Average standard deviation of split frequencies: 0.011595
661000 -- (-509.596) [-519.621] (-545.401) (-549.002) * (-549.251) (-518.173) (-566.194) [-523.246] -- 0:02:21
662000 -- [-514.675] (-527.090) (-550.255) (-552.936) * (-558.282) [-514.014] (-548.531) (-512.042) -- 0:02:20
663000 -- [-517.195] (-520.692) (-557.578) (-554.784) * (-555.397) [-512.605] (-550.403) (-517.970) -- 0:02:19
664000 -- [-514.971] (-519.350) (-548.500) (-541.710) * (-549.313) [-508.752] (-546.467) (-534.569) -- 0:02:19
665000 -- [-509.449] (-528.343) (-546.108) (-551.125) * (-551.198) (-511.540) (-549.094) [-514.411] -- 0:02:19
Average standard deviation of split frequencies: 0.012077
666000 -- [-519.828] (-517.056) (-548.997) (-550.170) * (-557.623) [-509.604] (-544.721) (-515.858) -- 0:02:18
667000 -- (-518.956) [-523.108] (-542.966) (-550.647) * (-553.416) [-513.317] (-564.572) (-512.408) -- 0:02:18
668000 -- (-522.594) [-517.399] (-542.940) (-547.175) * (-554.969) [-510.953] (-551.434) (-522.966) -- 0:02:17
669000 -- (-513.868) [-520.540] (-540.745) (-548.208) * (-546.172) [-510.173] (-546.975) (-525.498) -- 0:02:17
670000 -- (-512.154) [-511.392] (-544.910) (-557.920) * (-557.294) (-512.321) (-549.245) [-515.320] -- 0:02:16
Average standard deviation of split frequencies: 0.012388
671000 -- (-516.723) [-519.221] (-543.486) (-557.529) * (-551.963) (-523.940) (-568.733) [-505.739] -- 0:02:16
672000 -- (-526.635) [-517.162] (-546.978) (-552.803) * (-553.909) [-514.583] (-547.069) (-516.708) -- 0:02:16
673000 -- [-518.457] (-519.055) (-541.130) (-558.269) * (-556.831) (-516.595) (-552.781) [-516.402] -- 0:02:15
674000 -- [-517.151] (-517.201) (-542.732) (-546.691) * (-552.420) [-517.324] (-551.792) (-516.045) -- 0:02:15
675000 -- [-518.626] (-526.162) (-541.028) (-543.159) * (-553.149) (-512.931) (-546.767) [-508.750] -- 0:02:14
Average standard deviation of split frequencies: 0.012552
676000 -- [-512.326] (-523.891) (-542.223) (-546.692) * (-540.293) (-521.621) (-558.686) [-517.607] -- 0:02:14
677000 -- (-518.331) [-513.262] (-551.700) (-540.762) * (-548.435) (-517.492) (-548.369) [-505.085] -- 0:02:14
678000 -- (-519.209) [-521.155] (-553.881) (-540.760) * (-550.737) (-520.796) (-555.850) [-516.298] -- 0:02:13
679000 -- (-525.429) [-521.256] (-542.928) (-553.261) * (-547.722) (-525.017) (-545.313) [-510.476] -- 0:02:13
680000 -- (-527.990) [-510.094] (-546.068) (-540.450) * (-547.475) (-515.775) (-540.299) [-515.589] -- 0:02:12
Average standard deviation of split frequencies: 0.013072
681000 -- (-526.300) [-520.959] (-550.874) (-545.078) * (-550.708) (-524.476) (-538.110) [-508.156] -- 0:02:12
682000 -- [-520.400] (-518.966) (-551.274) (-555.474) * (-541.039) (-519.286) (-548.743) [-514.286] -- 0:02:11
683000 -- (-518.378) [-520.831] (-553.181) (-545.467) * (-531.517) (-520.626) (-540.787) [-508.104] -- 0:02:11
684000 -- [-511.409] (-519.707) (-540.113) (-539.072) * (-545.255) [-521.422] (-548.294) (-512.065) -- 0:02:11
685000 -- [-514.101] (-526.290) (-555.584) (-538.486) * (-544.579) (-517.469) (-546.673) [-512.622] -- 0:02:10
Average standard deviation of split frequencies: 0.012756
686000 -- [-511.044] (-517.527) (-565.416) (-537.254) * (-546.071) (-523.856) (-544.267) [-507.509] -- 0:02:10
687000 -- (-510.950) [-513.880] (-549.270) (-542.566) * (-543.827) (-523.751) (-551.981) [-511.161] -- 0:02:09
688000 -- [-513.633] (-519.237) (-554.966) (-544.073) * (-554.315) (-520.858) (-555.114) [-511.671] -- 0:02:09
689000 -- [-516.190] (-519.749) (-544.934) (-548.218) * (-544.078) (-520.950) (-554.679) [-513.673] -- 0:02:09
690000 -- [-514.138] (-517.229) (-548.187) (-538.776) * (-543.610) (-526.609) (-552.570) [-511.241] -- 0:02:08
Average standard deviation of split frequencies: 0.012883
691000 -- [-508.226] (-521.973) (-544.373) (-553.201) * (-551.775) (-525.303) (-549.382) [-510.798] -- 0:02:08
692000 -- [-507.226] (-511.692) (-544.510) (-559.583) * (-546.808) (-516.462) (-538.287) [-516.078] -- 0:02:07
693000 -- (-511.299) [-518.279] (-549.877) (-553.734) * (-557.030) (-516.683) (-544.964) [-509.295] -- 0:02:07
694000 -- [-513.950] (-524.814) (-543.491) (-543.985) * (-540.157) (-513.796) (-540.667) [-509.066] -- 0:02:06
695000 -- [-516.162] (-528.839) (-544.487) (-536.030) * (-552.802) (-520.254) (-539.642) [-518.043] -- 0:02:06
Average standard deviation of split frequencies: 0.013038
696000 -- (-517.390) [-523.994] (-548.017) (-561.148) * (-550.959) (-520.020) (-555.149) [-516.546] -- 0:02:06
697000 -- [-520.038] (-517.185) (-550.890) (-543.994) * (-553.021) (-524.125) (-560.009) [-528.028] -- 0:02:05
698000 -- [-506.836] (-528.849) (-546.525) (-550.510) * (-544.197) (-519.647) (-565.450) [-523.229] -- 0:02:05
699000 -- (-529.459) [-516.479] (-536.667) (-542.406) * (-542.367) [-515.391] (-556.986) (-524.475) -- 0:02:04
700000 -- (-517.007) [-519.479] (-544.031) (-545.063) * (-544.055) [-521.287] (-564.726) (-525.619) -- 0:02:04
Average standard deviation of split frequencies: 0.012489
701000 -- (-522.354) [-518.419] (-552.168) (-549.259) * (-535.563) (-522.944) (-563.007) [-529.363] -- 0:02:04
702000 -- (-516.496) [-519.865] (-554.598) (-546.004) * (-547.125) (-523.585) (-562.025) [-518.116] -- 0:02:03
703000 -- [-512.301] (-515.338) (-541.391) (-558.144) * (-546.124) (-526.887) (-546.774) [-514.814] -- 0:02:03
704000 -- (-520.056) [-518.346] (-548.478) (-536.838) * (-556.876) (-527.902) (-542.173) [-516.905] -- 0:02:02
705000 -- (-531.224) [-514.517] (-553.403) (-541.806) * (-550.273) [-520.893] (-545.985) (-518.141) -- 0:02:02
Average standard deviation of split frequencies: 0.012853
706000 -- [-515.201] (-522.976) (-557.034) (-548.340) * (-543.693) (-520.636) (-549.023) [-519.318] -- 0:02:02
707000 -- [-518.198] (-520.114) (-561.096) (-539.612) * (-548.945) (-528.428) (-548.547) [-511.269] -- 0:02:01
708000 -- [-509.646] (-522.337) (-552.466) (-547.959) * (-545.552) (-523.485) (-549.509) [-508.010] -- 0:02:01
709000 -- [-510.007] (-516.405) (-546.295) (-543.378) * (-557.149) (-508.215) (-550.149) [-506.760] -- 0:02:00
710000 -- [-504.502] (-519.542) (-550.206) (-551.704) * (-539.730) (-516.949) (-545.886) [-510.133] -- 0:02:00
Average standard deviation of split frequencies: 0.013101
711000 -- [-520.335] (-517.538) (-558.967) (-555.921) * (-554.883) (-523.759) (-555.821) [-510.381] -- 0:01:59
712000 -- [-512.476] (-512.096) (-551.613) (-547.793) * (-548.302) (-522.968) (-555.873) [-514.227] -- 0:01:59
713000 -- (-519.063) [-517.026] (-548.623) (-542.130) * (-549.328) (-521.487) (-555.657) [-510.723] -- 0:01:59
714000 -- [-519.367] (-515.265) (-550.589) (-537.258) * (-554.117) [-513.426] (-552.518) (-507.457) -- 0:01:58
715000 -- [-520.141] (-525.828) (-555.264) (-551.849) * (-555.703) (-522.135) (-543.800) [-509.364] -- 0:01:58
Average standard deviation of split frequencies: 0.013538
716000 -- (-523.134) [-514.175] (-548.234) (-541.906) * (-547.081) (-505.957) (-551.817) [-515.008] -- 0:01:57
717000 -- (-525.171) [-521.827] (-546.559) (-546.006) * (-544.692) (-516.611) (-548.965) [-524.775] -- 0:01:57
718000 -- (-520.145) [-513.557] (-550.850) (-542.652) * (-550.671) [-509.572] (-549.352) (-518.966) -- 0:01:57
719000 -- (-521.978) [-512.142] (-544.635) (-550.819) * (-552.200) (-510.293) (-549.385) [-514.989] -- 0:01:56
720000 -- (-519.129) [-523.838] (-548.339) (-552.837) * (-552.763) (-525.933) (-551.578) [-510.773] -- 0:01:56
Average standard deviation of split frequencies: 0.014309
721000 -- [-517.037] (-518.620) (-555.198) (-530.987) * (-547.144) [-521.621] (-551.925) (-517.519) -- 0:01:55
722000 -- [-516.631] (-525.277) (-547.291) (-544.208) * (-554.741) (-527.476) (-544.092) [-521.135] -- 0:01:55
723000 -- [-511.987] (-533.170) (-541.253) (-555.245) * (-545.121) [-519.194] (-544.027) (-518.174) -- 0:01:54
724000 -- (-517.215) [-522.098] (-546.002) (-550.818) * (-542.980) (-518.198) (-546.877) [-516.203] -- 0:01:54
725000 -- (-516.726) [-518.008] (-549.140) (-537.100) * (-542.663) (-514.004) (-544.026) [-516.030] -- 0:01:54
Average standard deviation of split frequencies: 0.012946
726000 -- [-517.684] (-529.914) (-541.929) (-543.513) * (-549.276) (-517.714) (-546.911) [-524.536] -- 0:01:53
727000 -- [-517.557] (-532.219) (-540.412) (-540.590) * (-547.547) [-517.173] (-555.000) (-518.795) -- 0:01:53
728000 -- [-515.746] (-519.289) (-542.523) (-548.132) * (-546.536) (-511.543) (-549.495) [-517.116] -- 0:01:52
729000 -- [-515.843] (-518.448) (-537.896) (-555.924) * (-541.991) (-523.469) (-549.697) [-510.950] -- 0:01:52
730000 -- [-512.987] (-519.980) (-547.314) (-540.340) * (-561.684) (-525.451) (-552.496) [-517.213] -- 0:01:52
Average standard deviation of split frequencies: 0.011694
731000 -- [-513.842] (-518.240) (-558.354) (-549.261) * (-544.767) [-517.701] (-550.819) (-514.922) -- 0:01:51
732000 -- [-517.223] (-516.858) (-544.409) (-547.015) * (-551.384) [-522.302] (-556.240) (-515.096) -- 0:01:50
733000 -- (-519.188) [-512.430] (-543.459) (-545.805) * (-550.427) (-517.367) (-542.073) [-517.017] -- 0:01:50
734000 -- [-516.494] (-522.423) (-536.638) (-555.940) * (-552.006) [-518.882] (-549.846) (-511.202) -- 0:01:50
735000 -- [-516.595] (-517.804) (-549.964) (-548.538) * (-542.657) (-514.554) (-558.676) [-517.386] -- 0:01:49
Average standard deviation of split frequencies: 0.011049
736000 -- [-517.299] (-520.683) (-545.006) (-547.219) * (-543.190) [-517.099] (-552.434) (-527.016) -- 0:01:49
737000 -- [-516.686] (-515.483) (-553.270) (-548.395) * (-553.755) [-511.055] (-557.499) (-518.995) -- 0:01:48
738000 -- [-515.867] (-513.739) (-546.712) (-537.541) * (-557.890) (-524.840) (-550.999) [-520.055] -- 0:01:48
739000 -- [-516.987] (-516.036) (-557.547) (-542.106) * (-544.453) [-523.533] (-554.378) (-531.071) -- 0:01:48
740000 -- (-525.739) [-520.881] (-543.943) (-553.910) * (-546.203) [-524.310] (-552.504) (-524.051) -- 0:01:47
Average standard deviation of split frequencies: 0.011416
741000 -- (-514.356) [-514.700] (-551.122) (-547.037) * (-548.168) (-520.836) (-560.138) [-517.300] -- 0:01:47
742000 -- [-511.421] (-508.268) (-547.653) (-539.378) * (-558.553) [-514.090] (-548.860) (-521.702) -- 0:01:47
743000 -- (-530.956) [-519.000] (-550.955) (-555.447) * (-552.161) [-518.917] (-552.444) (-514.937) -- 0:01:46
744000 -- (-510.089) [-518.955] (-550.564) (-547.257) * (-552.465) [-513.029] (-545.830) (-526.448) -- 0:01:45
745000 -- (-525.040) [-518.904] (-557.074) (-544.278) * (-546.257) [-512.773] (-545.852) (-523.636) -- 0:01:45
Average standard deviation of split frequencies: 0.012006
746000 -- [-518.531] (-523.181) (-554.234) (-542.691) * (-560.139) [-520.562] (-550.481) (-514.322) -- 0:01:45
747000 -- [-520.413] (-519.543) (-543.088) (-543.330) * (-553.731) (-520.611) (-537.033) [-524.732] -- 0:01:44
748000 -- [-524.246] (-530.019) (-540.493) (-540.556) * (-544.238) (-516.711) (-542.246) [-516.329] -- 0:01:44
749000 -- [-523.729] (-521.505) (-543.072) (-538.522) * (-548.318) (-518.690) (-562.331) [-513.308] -- 0:01:43
750000 -- (-534.542) [-518.347] (-546.591) (-541.056) * (-546.804) (-511.464) (-556.342) [-512.739] -- 0:01:43
Average standard deviation of split frequencies: 0.012599
751000 -- [-515.016] (-528.931) (-542.099) (-550.535) * (-553.277) [-516.441] (-548.115) (-520.092) -- 0:01:43
752000 -- [-514.555] (-518.966) (-547.500) (-552.009) * (-542.146) (-513.924) (-544.632) [-520.982] -- 0:01:42
753000 -- [-512.325] (-513.434) (-542.407) (-550.080) * (-548.858) [-512.713] (-553.821) (-522.207) -- 0:01:42
754000 -- (-512.055) [-521.624] (-541.035) (-537.840) * (-542.341) [-515.534] (-558.106) (-515.574) -- 0:01:42
755000 -- [-511.111] (-529.273) (-538.295) (-548.304) * (-547.535) (-518.335) (-554.240) [-504.831] -- 0:01:41
Average standard deviation of split frequencies: 0.012081
756000 -- [-513.224] (-524.997) (-548.683) (-544.615) * (-538.892) (-527.743) (-553.580) [-505.760] -- 0:01:41
757000 -- [-513.963] (-515.093) (-549.819) (-546.999) * (-543.444) (-517.611) (-551.274) [-518.393] -- 0:01:40
758000 -- [-519.496] (-518.241) (-555.479) (-554.292) * (-548.518) [-517.154] (-549.289) (-514.005) -- 0:01:40
759000 -- (-514.738) [-510.727] (-547.601) (-551.168) * (-547.915) [-515.610] (-558.602) (-529.635) -- 0:01:40
760000 -- (-517.064) [-510.746] (-544.223) (-547.792) * (-545.477) [-511.101] (-558.679) (-518.492) -- 0:01:39
Average standard deviation of split frequencies: 0.012240
761000 -- (-523.928) [-510.904] (-541.767) (-550.072) * (-543.133) [-517.262] (-540.473) (-523.741) -- 0:01:38
762000 -- [-516.229] (-521.065) (-543.883) (-550.478) * (-543.356) [-519.061] (-554.217) (-525.751) -- 0:01:38
763000 -- (-514.483) [-514.390] (-551.112) (-548.076) * (-557.251) [-523.151] (-558.373) (-518.902) -- 0:01:38
764000 -- (-520.127) [-512.786] (-547.448) (-546.086) * (-549.132) (-522.903) (-551.914) [-510.527] -- 0:01:37
765000 -- (-521.099) [-514.705] (-542.509) (-552.875) * (-555.640) [-516.702] (-551.237) (-512.049) -- 0:01:37
Average standard deviation of split frequencies: 0.012001
766000 -- (-528.358) [-516.332] (-545.269) (-558.051) * (-549.321) [-514.517] (-554.378) (-518.059) -- 0:01:37
767000 -- (-519.140) [-511.333] (-546.110) (-549.062) * (-539.778) [-519.119] (-550.624) (-519.981) -- 0:01:36
768000 -- (-524.276) [-519.434] (-542.821) (-549.481) * (-549.644) [-510.915] (-550.897) (-515.602) -- 0:01:36
769000 -- [-518.532] (-516.887) (-551.931) (-546.146) * (-542.450) (-514.908) (-553.363) [-514.538] -- 0:01:35
770000 -- (-524.511) [-511.966] (-552.346) (-542.205) * (-539.603) [-508.369] (-541.910) (-521.438) -- 0:01:35
Average standard deviation of split frequencies: 0.012043
771000 -- (-516.921) [-518.750] (-540.524) (-543.412) * (-550.254) [-515.008] (-546.331) (-516.925) -- 0:01:35
772000 -- [-513.869] (-508.718) (-542.190) (-546.216) * (-546.121) (-517.734) (-556.736) [-514.058] -- 0:01:34
773000 -- [-508.394] (-514.843) (-551.251) (-544.124) * (-546.037) [-527.282] (-557.038) (-515.242) -- 0:01:33
774000 -- (-513.468) [-517.861] (-554.056) (-549.383) * (-540.729) [-518.633] (-548.684) (-521.091) -- 0:01:33
775000 -- (-517.319) [-515.872] (-536.396) (-547.639) * (-541.192) (-522.980) (-550.098) [-520.558] -- 0:01:33
Average standard deviation of split frequencies: 0.011580
776000 -- (-521.976) [-515.043] (-542.904) (-539.508) * (-541.003) [-516.554] (-549.189) (-521.281) -- 0:01:32
777000 -- [-514.483] (-522.679) (-551.299) (-536.961) * (-555.259) [-522.164] (-549.254) (-533.871) -- 0:01:32
778000 -- [-515.090] (-520.276) (-545.610) (-541.508) * (-544.786) (-518.405) (-538.356) [-516.312] -- 0:01:32
779000 -- [-521.223] (-527.838) (-542.677) (-540.717) * (-549.868) [-515.531] (-548.996) (-522.533) -- 0:01:31
780000 -- [-522.473] (-517.041) (-542.372) (-551.648) * (-544.456) [-512.292] (-545.749) (-518.595) -- 0:01:31
Average standard deviation of split frequencies: 0.011247
781000 -- (-519.076) [-512.601] (-544.818) (-546.670) * (-541.856) (-513.308) (-552.707) [-514.892] -- 0:01:30
782000 -- [-516.706] (-531.533) (-547.746) (-539.013) * (-539.990) (-528.694) (-546.258) [-508.569] -- 0:01:30
783000 -- [-519.574] (-520.333) (-543.858) (-545.984) * (-547.308) [-528.007] (-544.561) (-520.156) -- 0:01:30
784000 -- (-519.740) [-513.857] (-540.584) (-537.287) * (-554.428) [-515.573] (-551.928) (-516.128) -- 0:01:29
785000 -- (-519.259) [-515.091] (-549.699) (-551.338) * (-543.816) [-514.868] (-546.635) (-520.899) -- 0:01:29
Average standard deviation of split frequencies: 0.011170
786000 -- (-524.512) [-516.999] (-544.211) (-544.561) * (-550.326) (-521.795) (-550.361) [-518.569] -- 0:01:28
787000 -- (-515.618) [-523.237] (-540.263) (-557.227) * (-543.743) (-514.293) (-561.583) [-513.987] -- 0:01:28
788000 -- (-512.045) [-520.102] (-551.444) (-555.124) * (-547.251) [-509.963] (-552.362) (-515.174) -- 0:01:27
789000 -- (-513.165) [-514.471] (-552.252) (-550.450) * (-549.610) [-508.667] (-556.102) (-517.884) -- 0:01:27
790000 -- (-517.146) [-514.281] (-554.918) (-547.971) * (-543.589) [-517.031] (-548.800) (-516.051) -- 0:01:27
Average standard deviation of split frequencies: 0.012148
791000 -- (-515.388) [-508.750] (-541.910) (-543.846) * (-542.984) (-512.185) (-550.393) [-510.443] -- 0:01:26
792000 -- (-525.421) [-511.064] (-549.483) (-537.462) * (-542.737) [-510.525] (-542.684) (-509.474) -- 0:01:26
793000 -- (-514.812) [-516.653] (-543.944) (-546.916) * (-545.836) [-516.406] (-559.851) (-524.022) -- 0:01:25
794000 -- [-517.821] (-523.616) (-537.450) (-554.415) * (-549.533) [-509.790] (-554.486) (-520.568) -- 0:01:25
795000 -- [-515.757] (-522.983) (-545.569) (-539.786) * (-549.418) (-533.927) (-553.342) [-521.841] -- 0:01:25
Average standard deviation of split frequencies: 0.010919
796000 -- [-510.666] (-532.741) (-548.696) (-538.320) * (-542.144) [-515.309] (-547.139) (-520.548) -- 0:01:24
797000 -- [-518.154] (-536.765) (-541.472) (-545.097) * (-539.746) [-515.343] (-548.976) (-524.023) -- 0:01:24
798000 -- [-511.608] (-524.411) (-546.170) (-548.998) * (-540.654) (-515.924) (-560.478) [-511.525] -- 0:01:23
799000 -- [-514.985] (-521.419) (-541.975) (-544.914) * (-545.422) [-515.841] (-552.933) (-513.176) -- 0:01:23
800000 -- [-505.871] (-515.209) (-541.515) (-552.619) * (-547.159) [-512.416] (-554.470) (-522.266) -- 0:01:23
Average standard deviation of split frequencies: 0.010414
801000 -- [-516.868] (-528.440) (-541.419) (-550.333) * (-540.297) [-513.067] (-552.126) (-530.804) -- 0:01:22
802000 -- (-525.717) [-519.623] (-544.729) (-556.205) * (-540.555) [-510.624] (-537.999) (-534.776) -- 0:01:22
803000 -- [-518.577] (-523.268) (-553.941) (-536.748) * (-538.354) [-510.665] (-556.022) (-554.489) -- 0:01:21
804000 -- (-528.250) [-513.584] (-558.934) (-550.659) * (-547.532) [-514.093] (-543.499) (-541.470) -- 0:01:21
805000 -- [-514.185] (-509.629) (-544.201) (-549.912) * (-552.561) [-511.602] (-552.084) (-553.619) -- 0:01:20
Average standard deviation of split frequencies: 0.011551
806000 -- (-516.216) [-521.157] (-544.875) (-557.408) * (-544.613) [-508.029] (-545.253) (-538.504) -- 0:01:20
807000 -- [-511.572] (-524.997) (-546.659) (-562.295) * (-546.195) [-511.059] (-553.092) (-542.463) -- 0:01:20
808000 -- (-513.851) [-518.125] (-537.853) (-551.358) * (-534.915) [-511.584] (-552.879) (-558.025) -- 0:01:19
809000 -- (-515.353) [-510.983] (-543.210) (-553.457) * (-539.937) [-510.424] (-557.459) (-551.387) -- 0:01:19
810000 -- (-515.914) [-515.767] (-557.383) (-555.400) * (-541.672) [-517.119] (-557.641) (-545.295) -- 0:01:18
Average standard deviation of split frequencies: 0.012284
811000 -- (-523.755) [-517.649] (-557.856) (-550.575) * (-541.735) [-512.118] (-542.682) (-541.792) -- 0:01:18
812000 -- (-526.047) [-507.651] (-552.778) (-548.117) * (-545.664) [-507.024] (-558.164) (-547.219) -- 0:01:18
813000 -- (-527.674) [-518.395] (-541.454) (-543.409) * (-544.176) [-513.369] (-556.709) (-542.047) -- 0:01:17
814000 -- [-506.894] (-519.570) (-546.576) (-539.979) * (-549.891) [-517.138] (-549.561) (-554.677) -- 0:01:17
815000 -- [-511.210] (-528.340) (-554.856) (-537.156) * (-547.201) [-511.686] (-550.904) (-548.122) -- 0:01:16
Average standard deviation of split frequencies: 0.011337
816000 -- [-508.912] (-528.775) (-541.815) (-537.926) * (-547.992) [-511.435] (-547.825) (-558.488) -- 0:01:16
817000 -- [-511.661] (-513.541) (-560.444) (-544.319) * (-547.475) [-518.984] (-546.305) (-544.648) -- 0:01:15
818000 -- [-511.771] (-525.618) (-542.133) (-548.138) * (-541.198) [-510.766] (-551.575) (-539.946) -- 0:01:15
819000 -- [-512.514] (-518.533) (-546.503) (-544.119) * (-539.556) [-512.450] (-546.614) (-543.623) -- 0:01:15
820000 -- [-515.153] (-512.123) (-556.139) (-542.602) * (-542.154) [-515.497] (-545.619) (-547.234) -- 0:01:14
Average standard deviation of split frequencies: 0.010016
821000 -- [-515.320] (-518.055) (-547.334) (-546.023) * (-542.920) [-519.924] (-553.464) (-540.798) -- 0:01:14
822000 -- (-521.759) [-514.134] (-540.939) (-553.283) * (-551.673) [-522.124] (-561.872) (-543.485) -- 0:01:13
823000 -- (-509.319) [-512.555] (-553.866) (-541.813) * (-539.059) [-523.496] (-554.694) (-543.187) -- 0:01:13
824000 -- [-521.796] (-525.968) (-540.514) (-540.428) * (-548.203) [-521.102] (-545.254) (-544.301) -- 0:01:13
825000 -- (-514.512) [-523.610] (-559.642) (-545.946) * (-540.417) [-508.824] (-540.523) (-543.297) -- 0:01:12
Average standard deviation of split frequencies: 0.009274
826000 -- [-507.645] (-523.522) (-547.481) (-544.231) * (-560.000) [-516.747] (-539.505) (-541.724) -- 0:01:12
827000 -- [-511.666] (-527.664) (-536.710) (-539.154) * (-543.986) [-516.856] (-537.164) (-538.153) -- 0:01:11
828000 -- (-517.884) [-520.624] (-551.277) (-546.637) * (-541.657) [-508.778] (-555.986) (-540.964) -- 0:01:11
829000 -- [-514.707] (-511.071) (-549.284) (-553.276) * (-542.736) [-513.094] (-545.442) (-534.281) -- 0:01:10
830000 -- (-515.305) [-513.151] (-553.173) (-548.676) * (-541.348) [-512.108] (-536.488) (-542.517) -- 0:01:10
Average standard deviation of split frequencies: 0.009648
831000 -- [-509.510] (-513.771) (-543.103) (-549.014) * (-541.312) [-507.574] (-547.684) (-554.000) -- 0:01:09
832000 -- [-517.585] (-521.296) (-550.508) (-545.500) * (-553.717) [-517.484] (-532.053) (-544.314) -- 0:01:09
833000 -- [-512.404] (-518.123) (-540.450) (-546.144) * (-547.374) [-516.364] (-537.162) (-540.113) -- 0:01:09
834000 -- [-510.775] (-517.860) (-550.764) (-548.727) * (-553.408) [-524.727] (-554.173) (-539.465) -- 0:01:08
835000 -- [-512.280] (-531.902) (-550.562) (-550.389) * (-541.909) [-523.042] (-551.276) (-534.885) -- 0:01:08
Average standard deviation of split frequencies: 0.009903
836000 -- (-521.933) [-514.833] (-539.878) (-549.124) * (-548.689) [-515.557] (-549.119) (-540.229) -- 0:01:07
837000 -- (-523.809) [-526.724] (-545.709) (-549.272) * (-549.894) [-520.084] (-546.575) (-548.818) -- 0:01:07
838000 -- [-518.754] (-517.394) (-550.158) (-547.211) * (-546.843) [-514.033] (-550.738) (-540.322) -- 0:01:07
839000 -- (-522.281) [-508.361] (-546.487) (-553.480) * (-547.809) [-512.453] (-544.748) (-540.937) -- 0:01:06
840000 -- (-518.263) [-523.412] (-553.040) (-542.347) * (-546.941) [-512.060] (-547.133) (-547.603) -- 0:01:06
Average standard deviation of split frequencies: 0.010129
841000 -- (-525.968) [-515.879] (-557.232) (-547.518) * (-533.688) [-510.771] (-549.747) (-540.783) -- 0:01:05
842000 -- (-518.671) [-508.892] (-549.725) (-545.321) * (-542.331) [-525.261] (-538.444) (-541.661) -- 0:01:05
843000 -- (-520.498) [-515.393] (-551.171) (-552.140) * (-541.344) [-520.241] (-546.256) (-543.820) -- 0:01:04
844000 -- (-517.469) [-519.345] (-553.929) (-542.932) * (-544.214) [-522.535] (-538.515) (-547.819) -- 0:01:04
845000 -- [-516.360] (-526.969) (-544.604) (-553.798) * (-538.507) [-521.863] (-547.088) (-552.707) -- 0:01:04
Average standard deviation of split frequencies: 0.009821
846000 -- [-518.371] (-520.739) (-541.634) (-549.584) * (-546.107) [-516.387] (-551.855) (-554.557) -- 0:01:03
847000 -- [-516.726] (-510.398) (-547.042) (-555.087) * (-541.935) [-507.237] (-548.345) (-544.268) -- 0:01:03
848000 -- [-512.039] (-520.500) (-539.754) (-549.215) * (-536.721) [-514.292] (-553.646) (-536.223) -- 0:01:02
849000 -- (-512.018) [-519.120] (-553.509) (-562.823) * (-550.145) [-515.676] (-554.614) (-540.666) -- 0:01:02
850000 -- [-514.856] (-526.724) (-546.783) (-545.154) * (-535.849) [-517.275] (-547.191) (-547.487) -- 0:01:02
Average standard deviation of split frequencies: 0.010321
851000 -- [-518.616] (-530.919) (-544.678) (-550.474) * (-544.302) [-520.127] (-542.670) (-549.149) -- 0:01:01
852000 -- [-517.404] (-520.827) (-551.563) (-538.482) * (-545.196) [-519.794] (-528.703) (-544.981) -- 0:01:01
853000 -- [-518.654] (-518.151) (-542.582) (-542.882) * (-536.471) [-514.623] (-545.508) (-552.426) -- 0:01:00
854000 -- (-518.633) [-517.258] (-542.727) (-534.430) * (-546.350) [-516.055] (-534.253) (-558.804) -- 0:01:00
855000 -- [-511.135] (-520.134) (-540.501) (-549.525) * (-545.539) [-516.529] (-537.603) (-556.540) -- 0:01:00
Average standard deviation of split frequencies: 0.010670
856000 -- [-515.176] (-522.734) (-558.544) (-549.070) * (-547.712) [-516.206] (-543.126) (-548.657) -- 0:00:59
857000 -- [-513.754] (-513.123) (-535.408) (-545.095) * (-555.697) [-510.913] (-535.769) (-553.805) -- 0:00:59
858000 -- (-518.261) [-517.311] (-541.841) (-548.857) * (-538.823) [-512.231] (-544.162) (-541.814) -- 0:00:58
859000 -- (-522.395) [-520.167] (-550.718) (-543.117) * (-551.141) [-525.471] (-547.112) (-541.906) -- 0:00:58
860000 -- (-513.424) [-512.966] (-546.549) (-539.774) * (-542.088) [-516.743] (-553.328) (-542.505) -- 0:00:57
Average standard deviation of split frequencies: 0.010544
861000 -- [-510.552] (-521.032) (-551.971) (-543.471) * (-542.362) [-507.761] (-551.804) (-552.432) -- 0:00:57
862000 -- [-511.480] (-520.979) (-542.187) (-550.847) * (-543.494) [-510.436] (-538.601) (-546.865) -- 0:00:57
863000 -- [-516.365] (-519.154) (-551.599) (-538.204) * (-545.648) [-517.702] (-540.985) (-544.063) -- 0:00:56
864000 -- [-517.337] (-523.597) (-545.753) (-542.530) * (-539.685) [-515.835] (-537.960) (-550.204) -- 0:00:56
865000 -- [-515.342] (-516.762) (-548.794) (-551.314) * (-544.125) [-511.195] (-545.072) (-541.384) -- 0:00:55
Average standard deviation of split frequencies: 0.010581
866000 -- [-512.300] (-512.460) (-544.444) (-540.295) * (-536.409) [-512.811] (-540.663) (-537.833) -- 0:00:55
867000 -- [-515.957] (-538.187) (-547.659) (-545.891) * (-542.659) [-508.556] (-540.959) (-543.981) -- 0:00:55
868000 -- [-511.340] (-530.970) (-560.324) (-542.901) * (-538.787) [-514.736] (-544.647) (-543.494) -- 0:00:54
869000 -- [-529.114] (-521.258) (-540.348) (-547.441) * (-539.935) [-508.990] (-553.427) (-541.448) -- 0:00:54
870000 -- (-525.361) [-521.267] (-537.303) (-546.593) * (-537.964) [-514.072] (-536.727) (-549.384) -- 0:00:53
Average standard deviation of split frequencies: 0.010829
871000 -- [-511.919] (-524.641) (-545.012) (-541.297) * (-541.624) [-515.577] (-540.668) (-542.410) -- 0:00:53
872000 -- (-518.589) [-511.440] (-552.851) (-549.966) * (-549.531) [-517.312] (-539.348) (-545.304) -- 0:00:52
873000 -- (-521.592) [-520.989] (-545.735) (-540.765) * (-536.384) [-517.617] (-545.621) (-557.455) -- 0:00:52
874000 -- (-524.624) [-518.666] (-541.297) (-543.343) * (-543.152) [-511.384] (-541.264) (-543.202) -- 0:00:52
875000 -- [-518.903] (-526.597) (-552.757) (-545.641) * (-539.454) [-514.537] (-549.684) (-534.943) -- 0:00:51
Average standard deviation of split frequencies: 0.010695
876000 -- (-524.650) [-516.148] (-537.651) (-554.719) * (-540.887) [-516.433] (-544.044) (-543.883) -- 0:00:51
877000 -- (-520.060) [-521.588] (-555.990) (-547.584) * (-539.984) [-513.206] (-545.419) (-553.689) -- 0:00:50
878000 -- (-522.893) [-514.270] (-549.131) (-545.117) * (-547.974) [-517.416] (-546.587) (-542.667) -- 0:00:50
879000 -- (-513.115) [-516.511] (-542.061) (-549.985) * (-544.721) [-515.696] (-544.396) (-540.370) -- 0:00:50
880000 -- (-513.216) [-519.679] (-544.153) (-540.895) * (-547.005) [-520.045] (-546.777) (-548.001) -- 0:00:49
Average standard deviation of split frequencies: 0.010839
881000 -- (-528.910) [-516.910] (-549.790) (-541.266) * (-539.162) [-518.828] (-535.859) (-545.652) -- 0:00:49
882000 -- (-521.932) [-510.176] (-547.081) (-545.521) * (-542.328) [-521.112] (-545.375) (-545.396) -- 0:00:48
883000 -- (-527.834) [-509.824] (-536.598) (-546.804) * (-551.127) [-528.404] (-534.263) (-542.388) -- 0:00:48
884000 -- (-517.353) [-512.109] (-543.006) (-548.376) * (-537.475) [-515.052] (-541.226) (-542.052) -- 0:00:48
885000 -- [-513.619] (-517.408) (-541.394) (-540.309) * (-548.207) [-515.931] (-546.490) (-542.083) -- 0:00:47
Average standard deviation of split frequencies: 0.010176
886000 -- (-524.244) [-509.011] (-537.579) (-543.508) * (-538.350) [-510.068] (-543.556) (-546.803) -- 0:00:47
887000 -- (-520.517) [-518.009] (-548.558) (-546.079) * (-541.682) [-514.839] (-539.675) (-543.104) -- 0:00:46
888000 -- [-517.352] (-530.680) (-548.712) (-558.549) * (-553.702) [-520.096] (-546.843) (-553.155) -- 0:00:46
889000 -- [-523.019] (-529.618) (-552.986) (-558.784) * (-545.738) [-510.698] (-548.023) (-541.975) -- 0:00:45
890000 -- [-534.138] (-527.333) (-552.219) (-549.913) * (-545.957) [-513.776] (-546.399) (-546.491) -- 0:00:45
Average standard deviation of split frequencies: 0.010023
891000 -- [-525.508] (-526.579) (-558.074) (-547.817) * (-540.817) [-513.943] (-530.635) (-550.556) -- 0:00:45
892000 -- (-520.651) [-518.964] (-553.977) (-538.931) * (-537.570) [-514.241] (-537.499) (-550.585) -- 0:00:44
893000 -- (-525.928) [-517.367] (-554.110) (-538.974) * (-540.009) [-518.014] (-532.191) (-555.833) -- 0:00:44
894000 -- [-538.978] (-521.807) (-551.674) (-551.380) * (-534.752) [-516.851] (-539.930) (-551.697) -- 0:00:43
895000 -- (-525.419) [-516.405] (-553.844) (-559.674) * (-534.626) [-511.116] (-541.437) (-552.843) -- 0:00:43
Average standard deviation of split frequencies: 0.010194
896000 -- (-524.305) [-513.925] (-551.885) (-559.538) * (-543.467) [-515.053] (-543.744) (-543.066) -- 0:00:43
897000 -- [-520.284] (-520.175) (-551.125) (-554.695) * (-538.514) [-526.045] (-541.228) (-547.171) -- 0:00:42
898000 -- [-522.875] (-528.731) (-558.384) (-557.200) * (-543.815) [-515.553] (-538.882) (-542.034) -- 0:00:42
899000 -- (-523.333) [-519.288] (-538.531) (-552.380) * (-544.509) [-507.625] (-544.408) (-541.269) -- 0:00:41
900000 -- [-514.952] (-525.550) (-546.325) (-551.219) * (-540.646) [-512.738] (-554.673) (-547.852) -- 0:00:41
Average standard deviation of split frequencies: 0.010566
901000 -- (-525.372) [-511.437] (-546.421) (-554.598) * (-543.294) [-512.195] (-549.254) (-540.023) -- 0:00:40
902000 -- (-525.433) [-514.985] (-543.802) (-551.985) * (-546.899) [-511.438] (-540.549) (-545.894) -- 0:00:40
903000 -- (-509.987) [-519.189] (-541.501) (-541.249) * (-550.524) [-515.294] (-550.984) (-547.873) -- 0:00:40
904000 -- [-510.503] (-525.547) (-548.503) (-540.375) * (-549.207) [-511.028] (-538.892) (-542.353) -- 0:00:39
905000 -- [-518.236] (-516.732) (-559.502) (-551.529) * (-544.680) [-517.005] (-546.294) (-539.689) -- 0:00:39
Average standard deviation of split frequencies: 0.010666
906000 -- (-517.477) [-513.718] (-555.769) (-544.636) * (-539.714) [-509.742] (-545.543) (-552.361) -- 0:00:38
907000 -- (-530.967) [-508.673] (-551.530) (-538.088) * (-542.927) [-522.998] (-547.785) (-542.893) -- 0:00:38
908000 -- [-522.323] (-515.262) (-549.763) (-541.077) * (-536.267) [-512.454] (-537.295) (-548.841) -- 0:00:37
909000 -- [-528.899] (-524.328) (-549.738) (-551.912) * (-540.641) [-516.279] (-541.316) (-544.079) -- 0:00:37
910000 -- [-512.555] (-527.705) (-544.291) (-550.866) * (-546.150) [-512.013] (-547.406) (-560.710) -- 0:00:37
Average standard deviation of split frequencies: 0.011194
911000 -- [-517.153] (-519.945) (-548.752) (-549.891) * (-551.160) [-509.039] (-544.127) (-539.002) -- 0:00:36
912000 -- (-527.070) [-516.834] (-543.786) (-552.479) * (-544.187) [-509.797] (-542.151) (-539.222) -- 0:00:36
913000 -- (-524.585) [-516.374] (-549.630) (-547.129) * (-551.871) [-511.891] (-547.264) (-542.633) -- 0:00:35
914000 -- (-526.553) [-514.653] (-545.320) (-555.455) * (-552.976) [-510.404] (-546.099) (-541.948) -- 0:00:35
915000 -- [-513.735] (-519.203) (-555.015) (-540.812) * (-543.862) [-515.557] (-536.544) (-544.652) -- 0:00:35
Average standard deviation of split frequencies: 0.011322
916000 -- (-512.089) [-516.499] (-546.390) (-543.145) * (-540.520) [-510.124] (-537.470) (-534.929) -- 0:00:34
917000 -- [-525.139] (-521.420) (-537.339) (-547.728) * (-544.966) [-512.061] (-536.599) (-537.450) -- 0:00:34
918000 -- [-522.898] (-519.140) (-537.410) (-536.492) * (-537.702) [-507.635] (-539.574) (-547.850) -- 0:00:33
919000 -- (-521.165) [-518.664] (-555.594) (-546.595) * (-541.678) [-514.441] (-557.594) (-535.730) -- 0:00:33
920000 -- [-515.148] (-517.642) (-545.599) (-548.843) * (-539.868) [-516.699] (-546.671) (-536.769) -- 0:00:33
Average standard deviation of split frequencies: 0.012129
921000 -- [-513.251] (-526.477) (-538.640) (-547.875) * (-537.833) [-518.069] (-553.058) (-538.561) -- 0:00:32
922000 -- [-517.431] (-521.469) (-547.227) (-553.516) * (-537.867) [-519.332] (-541.052) (-535.780) -- 0:00:32
923000 -- [-515.319] (-517.366) (-549.816) (-549.187) * (-539.437) [-520.499] (-545.875) (-546.163) -- 0:00:31
924000 -- [-517.669] (-516.050) (-552.613) (-551.432) * (-546.838) [-514.253] (-540.170) (-545.909) -- 0:00:31
925000 -- [-518.563] (-518.159) (-551.056) (-551.601) * (-543.717) [-508.180] (-543.228) (-553.149) -- 0:00:30
Average standard deviation of split frequencies: 0.012791
926000 -- (-516.737) [-510.736] (-547.036) (-551.330) * (-541.207) [-511.119] (-558.385) (-539.481) -- 0:00:30
927000 -- (-521.584) [-516.275] (-546.528) (-553.289) * (-547.262) [-514.383] (-542.970) (-543.628) -- 0:00:30
928000 -- [-519.854] (-527.918) (-547.090) (-547.426) * (-538.757) [-517.776] (-543.545) (-549.967) -- 0:00:29
929000 -- [-520.609] (-519.120) (-543.060) (-543.630) * (-538.861) [-509.732] (-553.839) (-545.779) -- 0:00:29
930000 -- [-512.970] (-514.760) (-560.729) (-543.917) * (-548.380) [-513.140] (-539.435) (-543.385) -- 0:00:28
Average standard deviation of split frequencies: 0.013803
931000 -- [-517.057] (-519.484) (-558.897) (-553.751) * (-542.046) [-513.138] (-539.143) (-536.823) -- 0:00:28
932000 -- [-517.009] (-516.479) (-559.046) (-557.322) * (-550.177) [-518.634] (-546.964) (-535.346) -- 0:00:28
933000 -- (-519.149) [-515.596] (-552.446) (-548.188) * (-544.160) [-517.644] (-537.608) (-535.036) -- 0:00:27
934000 -- [-516.231] (-522.168) (-542.684) (-551.972) * (-548.325) [-517.228] (-544.006) (-545.876) -- 0:00:27
935000 -- [-519.104] (-519.654) (-549.958) (-543.187) * (-538.441) [-512.097] (-548.124) (-532.564) -- 0:00:26
Average standard deviation of split frequencies: 0.014543
936000 -- (-514.070) [-508.370] (-561.128) (-544.993) * (-553.802) [-512.905] (-541.881) (-554.368) -- 0:00:26
937000 -- [-517.779] (-517.170) (-556.621) (-558.748) * (-543.275) [-515.648] (-549.191) (-559.909) -- 0:00:26
938000 -- (-523.742) [-525.269] (-546.899) (-542.798) * (-546.880) [-519.036] (-537.830) (-545.672) -- 0:00:25
939000 -- [-515.785] (-520.778) (-550.802) (-547.020) * (-536.907) [-518.893] (-539.635) (-546.450) -- 0:00:25
940000 -- [-506.802] (-513.999) (-547.468) (-552.104) * (-540.711) [-511.645] (-544.770) (-556.160) -- 0:00:24
Average standard deviation of split frequencies: 0.014408
941000 -- (-514.687) [-513.426] (-546.723) (-542.362) * (-556.996) [-517.463] (-551.204) (-566.314) -- 0:00:24
942000 -- [-512.217] (-511.203) (-550.444) (-546.721) * (-543.808) [-518.763] (-546.966) (-551.599) -- 0:00:23
943000 -- [-507.309] (-524.348) (-556.585) (-543.549) * (-548.276) [-518.425] (-543.397) (-555.950) -- 0:00:23
944000 -- [-515.960] (-523.462) (-552.557) (-549.657) * (-530.700) [-517.093] (-537.712) (-549.471) -- 0:00:23
945000 -- [-523.030] (-512.572) (-548.238) (-560.265) * (-539.931) [-519.047] (-539.716) (-549.596) -- 0:00:22
Average standard deviation of split frequencies: 0.014171
946000 -- [-514.711] (-526.940) (-547.814) (-552.209) * (-552.955) [-515.356] (-549.167) (-540.594) -- 0:00:22
947000 -- (-525.612) [-519.012] (-543.391) (-549.166) * (-548.417) [-524.536] (-554.228) (-543.094) -- 0:00:21
948000 -- [-517.319] (-524.495) (-537.445) (-545.053) * (-544.896) [-514.406] (-557.550) (-540.022) -- 0:00:21
949000 -- (-519.347) [-518.984] (-557.889) (-545.698) * (-529.943) [-514.293] (-553.603) (-546.253) -- 0:00:21
950000 -- (-515.572) [-517.563] (-543.794) (-548.045) * (-544.646) [-513.696] (-544.338) (-542.657) -- 0:00:20
Average standard deviation of split frequencies: 0.014535
951000 -- [-514.836] (-516.583) (-538.020) (-541.045) * (-541.648) [-513.730] (-553.918) (-538.326) -- 0:00:20
952000 -- (-527.537) [-520.170] (-545.530) (-551.859) * (-540.443) [-509.618] (-536.606) (-538.408) -- 0:00:19
953000 -- [-516.013] (-515.324) (-547.858) (-542.834) * (-541.306) [-509.237] (-547.508) (-538.808) -- 0:00:19
954000 -- [-517.099] (-519.721) (-547.641) (-541.727) * (-542.534) [-519.502] (-543.388) (-543.674) -- 0:00:18
955000 -- [-515.446] (-513.259) (-547.085) (-550.637) * (-541.854) [-512.663] (-551.701) (-532.865) -- 0:00:18
Average standard deviation of split frequencies: 0.015070
956000 -- [-520.828] (-522.534) (-537.576) (-543.879) * (-540.019) [-511.710] (-542.805) (-541.068) -- 0:00:18
957000 -- [-522.312] (-514.758) (-542.831) (-542.619) * (-538.586) [-512.668] (-560.732) (-541.142) -- 0:00:17
958000 -- [-512.457] (-518.557) (-546.694) (-545.069) * (-535.954) [-506.869] (-539.152) (-549.729) -- 0:00:17
959000 -- [-506.813] (-518.957) (-556.787) (-536.289) * (-541.777) [-515.809] (-546.154) (-541.503) -- 0:00:16
960000 -- [-506.418] (-520.698) (-542.812) (-545.110) * (-535.858) [-517.038] (-539.744) (-540.867) -- 0:00:16
Average standard deviation of split frequencies: 0.015151
961000 -- [-509.275] (-516.520) (-550.257) (-538.776) * (-536.685) [-516.462] (-546.058) (-540.300) -- 0:00:16
962000 -- (-515.193) [-511.253] (-553.969) (-537.943) * (-550.335) [-509.645] (-546.574) (-549.227) -- 0:00:15
963000 -- (-526.088) [-517.231] (-544.538) (-545.375) * (-546.196) [-510.529] (-547.894) (-548.644) -- 0:00:15
964000 -- (-519.256) [-530.115] (-546.184) (-555.306) * (-552.271) [-520.411] (-554.749) (-549.889) -- 0:00:14
965000 -- (-525.994) [-517.243] (-547.258) (-545.490) * (-543.724) [-522.755] (-549.294) (-551.746) -- 0:00:14
Average standard deviation of split frequencies: 0.014426
966000 -- (-525.150) [-517.813] (-547.580) (-550.513) * (-537.614) [-516.536] (-550.543) (-550.052) -- 0:00:14
967000 -- (-528.280) [-514.548] (-557.884) (-544.397) * (-545.011) [-506.610] (-551.697) (-548.290) -- 0:00:13
968000 -- (-523.056) [-519.796] (-552.250) (-549.393) * (-537.773) [-511.561] (-537.113) (-555.999) -- 0:00:13
969000 -- [-521.185] (-509.354) (-549.903) (-547.541) * (-535.673) [-515.710] (-547.453) (-547.340) -- 0:00:12
970000 -- (-521.417) [-515.412] (-557.881) (-549.767) * (-542.187) [-517.813] (-545.425) (-539.812) -- 0:00:12
Average standard deviation of split frequencies: 0.015237
971000 -- (-523.110) [-512.076] (-549.672) (-549.893) * (-546.464) [-509.619] (-544.142) (-543.834) -- 0:00:11
972000 -- [-514.742] (-505.948) (-546.988) (-561.555) * (-545.334) [-516.368] (-545.496) (-545.776) -- 0:00:11
973000 -- (-516.848) [-509.730] (-545.073) (-553.048) * (-545.065) [-519.063] (-556.138) (-538.600) -- 0:00:11
974000 -- (-521.982) [-516.104] (-550.554) (-553.101) * (-553.396) [-518.560] (-546.778) (-544.005) -- 0:00:10
975000 -- (-527.017) [-509.495] (-548.436) (-546.162) * (-543.498) [-521.564] (-536.069) (-541.600) -- 0:00:10
Average standard deviation of split frequencies: 0.015758
976000 -- (-521.670) [-514.952] (-550.106) (-548.879) * (-546.642) [-520.113] (-549.646) (-549.424) -- 0:00:09
977000 -- (-534.153) [-507.281] (-543.597) (-542.519) * (-546.215) [-517.768] (-545.633) (-553.434) -- 0:00:09
978000 -- (-526.395) [-514.874] (-544.923) (-539.683) * (-544.304) [-517.364] (-543.125) (-541.783) -- 0:00:09
979000 -- (-511.298) [-512.713] (-549.960) (-547.074) * (-549.333) [-518.708] (-541.620) (-543.653) -- 0:00:08
980000 -- (-515.558) [-510.161] (-550.357) (-546.834) * (-546.263) [-515.195] (-535.073) (-537.898) -- 0:00:08
Average standard deviation of split frequencies: 0.015382
981000 -- [-513.463] (-520.214) (-546.741) (-544.051) * (-542.567) [-517.854] (-539.345) (-550.053) -- 0:00:07
982000 -- (-515.494) [-519.558] (-540.340) (-550.852) * (-548.083) [-527.977] (-535.115) (-538.318) -- 0:00:07
983000 -- (-522.873) [-519.027] (-552.652) (-548.036) * (-538.314) [-518.199] (-555.116) (-540.786) -- 0:00:07
984000 -- [-522.072] (-521.233) (-552.058) (-542.204) * (-544.257) [-513.411] (-534.989) (-539.563) -- 0:00:06
985000 -- (-521.615) [-513.960] (-551.749) (-541.908) * (-547.147) [-511.839] (-537.335) (-546.326) -- 0:00:06
Average standard deviation of split frequencies: 0.014970
986000 -- [-516.155] (-524.748) (-561.085) (-542.909) * (-547.000) [-521.740] (-543.239) (-542.320) -- 0:00:05
987000 -- [-525.017] (-538.916) (-535.354) (-539.802) * (-549.708) [-526.569] (-555.038) (-541.321) -- 0:00:05
988000 -- [-521.725] (-529.172) (-534.270) (-538.866) * (-545.551) [-517.750] (-542.971) (-535.835) -- 0:00:04
989000 -- [-514.500] (-519.227) (-540.846) (-555.655) * (-547.900) [-512.962] (-547.510) (-535.506) -- 0:00:04
990000 -- (-514.311) [-528.911] (-546.867) (-544.281) * (-545.235) [-522.383] (-539.940) (-547.494) -- 0:00:04
Average standard deviation of split frequencies: 0.014484
991000 -- [-513.043] (-529.694) (-559.673) (-547.825) * (-551.889) [-517.442] (-547.935) (-532.603) -- 0:00:03
992000 -- [-514.716] (-515.624) (-551.909) (-549.323) * (-535.710) [-523.115] (-544.293) (-542.035) -- 0:00:03
993000 -- [-516.305] (-534.894) (-543.091) (-552.947) * (-541.522) [-522.525] (-538.921) (-540.354) -- 0:00:02
994000 -- [-519.998] (-523.989) (-545.589) (-540.227) * (-538.737) [-513.699] (-541.691) (-542.006) -- 0:00:02
995000 -- (-541.807) [-505.464] (-546.877) (-551.539) * (-545.112) [-521.169] (-550.570) (-537.945) -- 0:00:02
Average standard deviation of split frequencies: 0.013578
996000 -- (-540.056) [-515.860] (-545.869) (-547.478) * (-546.575) [-518.553] (-541.384) (-548.707) -- 0:00:01
997000 -- (-544.710) [-514.442] (-543.863) (-554.827) * (-540.030) [-522.423] (-544.905) (-540.062) -- 0:00:01
998000 -- (-548.815) [-506.927] (-554.454) (-552.057) * (-541.672) [-520.853] (-545.412) (-557.238) -- 0:00:00
999000 -- (-542.152) [-515.282] (-545.187) (-552.393) * (-545.455) [-514.197] (-547.388) (-542.249) -- 0:00:00
1000000 -- (-539.337) [-512.935] (-558.245) (-555.698) * (-532.757) [-510.641] (-545.624) (-557.009) -- 0:00:00
Average standard deviation of split frequencies: 0.013102
Analysis completed in 6 mins 53 seconds
Analysis used 411.89 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -500.81
Likelihood of best state for "cold" chain of run 2 was -500.40
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
62.7 % ( 50 %) Dirichlet(Revmat{all})
82.7 % ( 73 %) Slider(Revmat{all})
41.9 % ( 40 %) Dirichlet(Pi{all})
41.4 % ( 26 %) Slider(Pi{all})
80.7 % ( 54 %) Multiplier(Alpha{1,2})
73.8 % ( 47 %) Multiplier(Alpha{3})
88.4 % ( 78 %) Slider(Pinvar{all})
75.6 % ( 73 %) ExtSPR(Tau{all},V{all})
64.8 % ( 65 %) ExtTBR(Tau{all},V{all})
78.3 % ( 77 %) NNI(Tau{all},V{all})
59.9 % ( 49 %) ParsSPR(Tau{all},V{all})
27.7 % ( 24 %) Multiplier(V{all})
83.3 % ( 86 %) Nodeslider(V{all})
28.0 % ( 25 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
62.7 % ( 60 %) Dirichlet(Revmat{all})
83.9 % ( 76 %) Slider(Revmat{all})
41.4 % ( 44 %) Dirichlet(Pi{all})
41.8 % ( 21 %) Slider(Pi{all})
81.3 % ( 72 %) Multiplier(Alpha{1,2})
73.8 % ( 53 %) Multiplier(Alpha{3})
88.2 % ( 62 %) Slider(Pinvar{all})
74.7 % ( 65 %) ExtSPR(Tau{all},V{all})
64.1 % ( 57 %) ExtTBR(Tau{all},V{all})
77.6 % ( 71 %) NNI(Tau{all},V{all})
59.2 % ( 67 %) ParsSPR(Tau{all},V{all})
27.7 % ( 30 %) Multiplier(V{all})
83.6 % ( 83 %) Nodeslider(V{all})
27.6 % ( 31 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.15 0.00 0.00
2 | 167192 0.06 0.01
3 | 166416 166001 0.32
4 | 166421 166665 167305
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.18 0.00 0.00
2 | 166989 0.04 0.01
3 | 166635 167035 0.32
4 | 166827 165953 166561
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -512.30
| 22 2 |
| 2 2 2 2 2 1 2 2 |
| 1 1 2 1 22 1 1 2 2 2 |
| 22 12 * 1 2 2 1 1 1 |
|2 2 1 * 1 2 12 2 1 2 *2 1 2 1 |
| 1 2 1 22 *2 1* 1 * 11 2 |
| 2 21 2 2 1 2 1 21 |
|1 1 ** 1 * 2 11 11 1 2 1 1|
| 1 1 2 1 1 2 1 2 2 1 |
| 2 1 1 2 1 1 2 |
| 1 1 2 2|
| 1 |
| |
| |
| 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -521.11
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -508.35 -531.69
2 -508.08 -525.92
--------------------------------------
TOTAL -508.20 -531.00
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.092590 0.000687 0.047170 0.144311 0.088900 957.53 1097.06 1.000
r(A<->C){all} 0.045888 0.001760 0.000034 0.131895 0.034063 227.99 277.12 1.003
r(A<->G){all} 0.229276 0.008145 0.079351 0.417785 0.222075 144.23 162.31 1.020
r(A<->T){all} 0.025033 0.000535 0.000001 0.072533 0.018439 330.80 345.05 1.002
r(C<->G){all} 0.052183 0.002486 0.000057 0.154903 0.037670 119.42 157.28 1.000
r(C<->T){all} 0.496660 0.010543 0.303939 0.698713 0.496124 157.98 203.58 1.016
r(G<->T){all} 0.150960 0.004221 0.035035 0.271394 0.141802 153.18 239.17 1.000
pi(A){all} 0.249317 0.000675 0.199352 0.300352 0.248996 970.40 1032.22 1.000
pi(C){all} 0.169709 0.000496 0.124062 0.211144 0.168874 995.31 1015.44 1.000
pi(G){all} 0.214737 0.000603 0.165392 0.260688 0.214759 814.99 966.88 1.000
pi(T){all} 0.366237 0.000833 0.308105 0.420555 0.365867 841.46 943.00 1.000
alpha{1,2} 0.696756 0.699799 0.000909 2.381770 0.381485 587.18 701.98 1.000
alpha{3} 1.305145 1.157877 0.000146 3.363833 1.022485 705.12 861.01 1.000
pinvar{all} 0.433981 0.047284 0.009650 0.765273 0.452479 362.63 367.44 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C212
2 -- C5
3 -- C59
4 -- C4
5 -- C187
6 -- C213
7 -- C262
8 -- C27
9 -- C39
10 -- C51
11 -- C215
12 -- C67
13 -- C278
14 -- C154
15 -- C179
16 -- C182
17 -- C136
18 -- C16
19 -- C192
20 -- C3
21 -- C220
22 -- C223
23 -- C247
24 -- C248
25 -- C251
26 -- C261
27 -- C263
28 -- C73
29 -- C48
30 -- C84
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------------------------
1 -- .*****************************
2 -- .*............................
3 -- ..*...........................
4 -- ...*..........................
5 -- ....*.........................
6 -- .....*........................
7 -- ......*.......................
8 -- .......*......................
9 -- ........*.....................
10 -- .........*....................
11 -- ..........*...................
12 -- ...........*..................
13 -- ............*.................
14 -- .............*................
15 -- ..............*...............
16 -- ...............*..............
17 -- ................*.............
18 -- .................*............
19 -- ..................*...........
20 -- ...................*..........
21 -- ....................*.........
22 -- .....................*........
23 -- ......................*.......
24 -- .......................*......
25 -- ........................*.....
26 -- .........................*....
27 -- ..........................*...
28 -- ...........................*..
29 -- ............................*.
30 -- .............................*
31 -- ......**...**........*****.**.
32 -- .....*....*.........*.........
33 -- .****.****.*********.*********
34 -- .****...**...*******......*..*
35 -- ............*........*.....*..
36 -- ......*....**........*****.**.
37 -- .****...**...*.*****......*..*
38 -- .....*..............*.........
39 -- ..........*.........*.........
40 -- .....*....*...................
41 -- .....................*.....*..
42 -- ............*........*........
43 -- ............*..............*..
44 -- ......**...*..........****..*.
45 -- ......**...**.*......*****.**.
46 -- .....***..***.......******.**.
------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 2938 0.978681 0.000942 0.978015 0.979347 2
33 2517 0.838441 0.001413 0.837442 0.839440 2
34 2268 0.755496 0.024497 0.738175 0.772818 2
35 2267 0.755163 0.007066 0.750167 0.760160 2
36 1806 0.601599 0.069721 0.552298 0.650899 2
37 1617 0.538641 0.040043 0.510326 0.566955 2
38 1000 0.333111 0.000000 0.333111 0.333111 2
39 996 0.331779 0.002827 0.329780 0.333777 2
40 973 0.324117 0.005182 0.320453 0.327781 2
41 945 0.314790 0.005182 0.311126 0.318454 2
42 878 0.292472 0.019786 0.278481 0.306462 2
43 858 0.285809 0.000000 0.285809 0.285809 2
44 567 0.188874 0.019315 0.175217 0.202532 2
45 482 0.160560 0.005653 0.156562 0.164557 2
46 439 0.146236 0.008009 0.140573 0.151899 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.003147 0.000005 0.000104 0.007456 0.002589 1.000 2
length{all}[2] 0.001215 0.000002 0.000000 0.003662 0.000823 1.001 2
length{all}[3] 0.001204 0.000002 0.000000 0.003720 0.000820 1.000 2
length{all}[4] 0.002344 0.000003 0.000086 0.005852 0.001892 1.000 2
length{all}[5] 0.001175 0.000002 0.000000 0.003644 0.000787 1.000 2
length{all}[6] 0.001197 0.000002 0.000000 0.003823 0.000762 1.000 2
length{all}[7] 0.002400 0.000004 0.000065 0.006103 0.001922 1.000 2
length{all}[8] 0.002861 0.000005 0.000062 0.007355 0.002370 1.003 2
length{all}[9] 0.001176 0.000002 0.000000 0.003612 0.000778 1.001 2
length{all}[10] 0.001134 0.000001 0.000000 0.003567 0.000765 1.000 2
length{all}[11] 0.001182 0.000002 0.000000 0.003732 0.000744 1.000 2
length{all}[12] 0.002415 0.000004 0.000055 0.006070 0.001929 1.000 2
length{all}[13] 0.001171 0.000001 0.000001 0.003493 0.000775 1.000 2
length{all}[14] 0.001181 0.000001 0.000000 0.003556 0.000800 1.000 2
length{all}[15] 0.002711 0.000004 0.000003 0.006631 0.002257 1.000 2
length{all}[16] 0.002313 0.000003 0.000052 0.005689 0.001871 1.000 2
length{all}[17] 0.001203 0.000002 0.000001 0.003604 0.000816 1.000 2
length{all}[18] 0.001179 0.000002 0.000001 0.003682 0.000778 1.000 2
length{all}[19] 0.001184 0.000002 0.000001 0.003653 0.000777 1.000 2
length{all}[20] 0.001159 0.000001 0.000000 0.003397 0.000797 1.000 2
length{all}[21] 0.001175 0.000002 0.000000 0.003638 0.000763 1.000 2
length{all}[22] 0.001197 0.000002 0.000000 0.003655 0.000802 1.000 2
length{all}[23] 0.001218 0.000002 0.000001 0.003703 0.000843 1.004 2
length{all}[24] 0.001175 0.000002 0.000001 0.003646 0.000767 1.000 2
length{all}[25] 0.001214 0.000002 0.000000 0.003657 0.000832 1.000 2
length{all}[26] 0.001191 0.000002 0.000000 0.003659 0.000803 1.000 2
length{all}[27] 0.001167 0.000002 0.000000 0.003662 0.000766 1.001 2
length{all}[28] 0.001172 0.000002 0.000000 0.003713 0.000746 1.000 2
length{all}[29] 0.002356 0.000004 0.000006 0.005910 0.001884 1.001 2
length{all}[30] 0.001174 0.000002 0.000001 0.003773 0.000756 1.000 2
length{all}[31] 0.007099 0.000014 0.001341 0.014415 0.006375 1.003 2
length{all}[32] 0.002906 0.000005 0.000038 0.007071 0.002384 1.002 2
length{all}[33] 0.003643 0.000006 0.000222 0.008268 0.003127 1.000 2
length{all}[34] 0.002956 0.000005 0.000015 0.007414 0.002371 1.000 2
length{all}[35] 0.002243 0.000003 0.000005 0.005530 0.001832 1.000 2
length{all}[36] 0.002377 0.000003 0.000002 0.006066 0.001953 1.001 2
length{all}[37] 0.002306 0.000003 0.000014 0.005884 0.001851 1.000 2
length{all}[38] 0.001209 0.000002 0.000000 0.003931 0.000799 1.008 2
length{all}[39] 0.001137 0.000001 0.000001 0.003518 0.000762 0.999 2
length{all}[40] 0.001204 0.000002 0.000001 0.003906 0.000747 1.001 2
length{all}[41] 0.001183 0.000002 0.000000 0.003703 0.000807 0.999 2
length{all}[42] 0.001175 0.000001 0.000002 0.003665 0.000785 1.001 2
length{all}[43] 0.001261 0.000002 0.000002 0.004037 0.000858 1.001 2
length{all}[44] 0.002433 0.000003 0.000022 0.005839 0.002037 0.998 2
length{all}[45] 0.002385 0.000004 0.000027 0.006038 0.001949 0.998 2
length{all}[46] 0.002524 0.000004 0.000012 0.006446 0.001987 0.999 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.013102
Maximum standard deviation of split frequencies = 0.069721
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.008
Clade credibility values:
/--------------------------------------------------------------------- C212 (1)
|
| /-------------- C213 (6)
| |
|--------------------------98--------------------------+-------------- C215 (11)
| |
| \-------------- C220 (21)
|
| /-------------- C5 (2)
| |
| |-------------- C59 (3)
| |
| |-------------- C4 (4)
| |
| |-------------- C187 (5)
| |
| |-------------- C39 (9)
| |
| |-------------- C51 (10)
| |
| |-------------- C154 (14)
+ /------54-----+
| | |-------------- C182 (16)
| | |
| | |-------------- C136 (17)
| | |
| | |-------------- C16 (18)
| | |
| | |-------------- C192 (19)
| /------------76------------+ |
| | | |-------------- C3 (20)
| | | |
| | | |-------------- C263 (27)
| | | |
| | | \-------------- C84 (30)
| | |
| | \---------------------------- C179 (15)
| |
| | /---------------------------- C262 (7)
| | |
| | |---------------------------- C67 (12)
\------84-----+ |
| | /-------------- C278 (13)
| | |
| |------76-----+-------------- C223 (22)
| | |
| | \-------------- C73 (28)
| /-----60-----+
| | |---------------------------- C247 (23)
| | |
| | |---------------------------- C248 (24)
| | |
| | |---------------------------- C251 (25)
\-----100-----+ |
| |---------------------------- C261 (26)
| |
| \---------------------------- C48 (29)
|
\----------------------------------------- C27 (8)
Phylogram (based on average branch lengths):
/------------- C212 (1)
|
| /--- C213 (6)
| |
|-----------+--- C215 (11)
| |
| \--- C220 (21)
|
| /---- C5 (2)
| |
| |---- C59 (3)
| |
| |--------- C4 (4)
| |
| |---- C187 (5)
| |
| |---- C39 (9)
| |
| |---- C51 (10)
| |
| |---- C154 (14)
+ /--------+
| | |--------- C182 (16)
| | |
| | |---- C136 (17)
| | |
| | |---- C16 (18)
| | |
| | |---- C192 (19)
| /-----------+ |
| | | |---- C3 (20)
| | | |
| | | |---- C263 (27)
| | | |
| | | \---- C84 (30)
| | |
| | \----------- C179 (15)
| |
| | /---------- C262 (7)
| | |
| | |---------- C67 (12)
\--------------+ |
| | /---- C278 (13)
| | |
| |--------+---- C223 (22)
| | |
| | \---- C73 (28)
| /--------+
| | |---- C247 (23)
| | |
| | |---- C248 (24)
| | |
| | |---- C251 (25)
\-------------------------------+ |
| |---- C261 (26)
| |
| \--------- C48 (29)
|
\----------- C27 (8)
|--------| 0.002 expected changes per site
Calculating tree probabilities...
Credible sets of trees (3002 trees sampled):
50 % credible set contains 1501 trees
90 % credible set contains 2702 trees
95 % credible set contains 2852 trees
99 % credible set contains 2972 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Fri Nov 18 14:40:18 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result--
-- Starting log on Sat Nov 19 11:37:46 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result/original_alignment/codeml,DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C154 267 sites
reading seq# 2 C182 267 sites
reading seq# 3 C179 267 sites
reading seq# 4 C215 267 sites
reading seq# 5 C16 267 sites
reading seq# 6 C136 267 sites
reading seq# 7 C192 267 sites
reading seq# 8 C278 267 sites
reading seq# 9 C73 267 sites
reading seq#10 C3 267 sites
reading seq#11 C5 267 sites
reading seq#12 C212 267 sites
reading seq#13 C59 267 sites
reading seq#14 C220 267 sites
reading seq#15 C223 267 sites
reading seq#16 C187 267 sites
reading seq#17 C4 267 sites
reading seq#18 C213 267 sites
reading seq#19 C248 267 sites
reading seq#20 C247 267 sites
reading seq#21 C27 267 sites
reading seq#22 C262 267 sites
reading seq#23 C261 267 sites
reading seq#24 C263 267 sites
reading seq#25 C251 267 sites
reading seq#26 C51 267 sites
reading seq#27 C39 267 sites
reading seq#28 C84 267 sites
reading seq#29 C48 267 sites
reading seq#30 C67 267 sitesns = 30 ls = 267
Reading sequences, sequential format..
Reading seq # 1: C154
Reading seq # 2: C182
Reading seq # 3: C179
Reading seq # 4: C215
Reading seq # 5: C16
Reading seq # 6: C136
Reading seq # 7: C192
Reading seq # 8: C278
Reading seq # 9: C73
Reading seq #10: C3
Reading seq #11: C5
Reading seq #12: C212
Reading seq #13: C59
Reading seq #14: C220
Reading seq #15: C223
Reading seq #16: C187
Reading seq #17: C4
Reading seq #18: C213
Reading seq #19: C248
Reading seq #20: C247
Reading seq #21: C27
Reading seq #22: C262
Reading seq #23: C261
Reading seq #24: C263
Reading seq #25: C251
Reading seq #26: C51
Reading seq #27: C39
Reading seq #28: C84
Reading seq #29: C48
Reading seq #30: C67
Sequences read..
Counting site patterns.. 0:00
Compressing, 49 patterns at 89 / 89 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 49 patterns at 89 / 89 sites (100.0%), 0:00
Counting codons..
3480 bytes for distance
47824 bytes for conP
4312 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(12, (18, 4, 14), (((11, 13, 17, 16, 27, 26, 1, 2, 6, 5, 7, 10, 24, 28), 3), ((22, 30, (8, 15, 9), 20, 19, 25, 23, 29), 21))); MP score: 20
191296 bytes for conP, adjusted
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
33
0.016452 0.029355 0.033382 0.079931 0.097672 0.096640 0.055280 0.083733 0.105001 0.019144 0.082171 0.103914 0.026600 0.020884 0.078822 0.108356 0.045218 0.088683 0.074341 0.047167 0.012923 0.076800 0.029034 0.083239 0.020645 0.025530 0.039071 0.045363 0.067242 0.054701 0.071117 0.102350 0.107760 0.068017 0.094138 0.031576 0.035577 0.300000 0.776688 0.302820
ntime & nrate & np: 37 2 40
Bounds (np=40):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 12.825838
np = 40
lnL0 = -617.169267
Iterating by ming2
Initial: fx= 617.169267
x= 0.01645 0.02935 0.03338 0.07993 0.09767 0.09664 0.05528 0.08373 0.10500 0.01914 0.08217 0.10391 0.02660 0.02088 0.07882 0.10836 0.04522 0.08868 0.07434 0.04717 0.01292 0.07680 0.02903 0.08324 0.02064 0.02553 0.03907 0.04536 0.06724 0.05470 0.07112 0.10235 0.10776 0.06802 0.09414 0.03158 0.03558 0.30000 0.77669 0.30282
1 h-m-p 0.0000 0.0002 376.2412 +++ 590.524086 m 0.0002 46 | 1/40
2 h-m-p 0.0000 0.0000 1412.0394 ++ 580.131895 m 0.0000 89 | 2/40
3 h-m-p 0.0000 0.0000 1863.7197 ++ 577.688043 m 0.0000 132 | 3/40
4 h-m-p 0.0000 0.0000 6072.8226 ++ 569.859529 m 0.0000 175 | 4/40
5 h-m-p 0.0000 0.0001 733.8113 ++ 560.063030 m 0.0001 218 | 5/40
6 h-m-p 0.0000 0.0001 1303.5551 ++ 545.999001 m 0.0001 261 | 6/40
7 h-m-p 0.0000 0.0000 1496.3957 ++ 543.637565 m 0.0000 304 | 7/40
8 h-m-p 0.0000 0.0001 713.8361 ++ 534.256772 m 0.0001 347 | 8/40
9 h-m-p 0.0000 0.0001 735.7960 ++ 520.918464 m 0.0001 390 | 9/40
10 h-m-p 0.0000 0.0000 1066029.8595 ++ 518.886918 m 0.0000 433 | 10/40
11 h-m-p 0.0000 0.0000 10299.3664 ++ 517.159699 m 0.0000 476 | 11/40
12 h-m-p 0.0000 0.0000 1199.8731 ++ 517.082601 m 0.0000 519 | 12/40
13 h-m-p 0.0000 0.0000 2272.6349 ++ 515.398297 m 0.0000 562 | 13/40
14 h-m-p 0.0000 0.0000 6708.4914 ++ 514.090799 m 0.0000 605 | 14/40
15 h-m-p 0.0000 0.0000 2313.9213 ++ 509.070470 m 0.0000 648 | 15/40
16 h-m-p 0.0000 0.0000 8795.8588 ++ 508.294649 m 0.0000 691 | 16/40
17 h-m-p 0.0000 0.0000 1668.0089 ++ 502.088965 m 0.0000 734 | 17/40
18 h-m-p 0.0000 0.0000 1929.4391 ++ 501.248333 m 0.0000 777 | 18/40
19 h-m-p 0.0000 0.0000 1049.6030 ++ 500.872656 m 0.0000 820 | 19/40
20 h-m-p 0.0000 0.0000 615.4440 ++ 500.331101 m 0.0000 863 | 20/40
21 h-m-p 0.0000 0.0000 626.5522 ++ 499.455633 m 0.0000 906 | 21/40
22 h-m-p 0.0000 0.0000 387.2307 ++ 498.501642 m 0.0000 949 | 22/40
23 h-m-p 0.0000 0.0011 118.7522 +++ 488.321607 m 0.0011 993 | 22/40
24 h-m-p 0.0000 0.0002 103.8608 CCCC 487.969327 3 0.0001 1042 | 22/40
25 h-m-p 0.0001 0.0003 77.7642 YCYCCC 487.596707 5 0.0002 1093 | 22/40
26 h-m-p 0.0001 0.0003 111.0440 CYCCC 487.246147 4 0.0001 1143 | 22/40
27 h-m-p 0.0003 0.0118 42.1327 ++CCYCC 482.737224 4 0.0083 1196 | 22/40
28 h-m-p 0.0001 0.0006 62.2434 CYCCC 482.562691 4 0.0002 1246 | 22/40
29 h-m-p 0.0007 0.0052 19.7066 +YCCC 482.108009 3 0.0018 1295 | 22/40
30 h-m-p 0.0068 0.0338 5.1111 +YYCCCC 479.521696 5 0.0233 1347 | 22/40
31 h-m-p 0.0007 0.0037 20.6092 +YYCCCC 478.262665 5 0.0024 1399 | 22/40
32 h-m-p 0.0019 0.0097 7.6839 +YCCC 476.869167 3 0.0083 1448 | 22/40
33 h-m-p 0.0209 0.1047 0.5713 ++ 475.652100 m 0.1047 1491 | 22/40
34 h-m-p -0.0000 -0.0000 1.1363
h-m-p: -4.76543334e-19 -2.38271667e-18 1.13626388e+00 475.652100
.. | 22/40
35 h-m-p 0.0000 0.0006 559.4462 +YYCCCC 474.306979 5 0.0000 1601 | 22/40
36 h-m-p 0.0001 0.0006 83.3078 YCYCCC 473.263630 5 0.0003 1652 | 22/40
37 h-m-p 0.0001 0.0006 66.7337 YCYCCC 472.807270 5 0.0003 1703 | 22/40
38 h-m-p 0.0001 0.0005 109.3878 CCCCC 472.462012 4 0.0002 1754 | 22/40
39 h-m-p 0.0003 0.0016 60.5632 CCCCC 472.104201 4 0.0004 1805 | 22/40
40 h-m-p 0.0004 0.0019 32.1923 CCCC 471.895813 3 0.0007 1854 | 22/40
41 h-m-p 0.0002 0.0012 42.8794 CCC 471.819830 2 0.0002 1901 | 22/40
42 h-m-p 0.0006 0.0073 18.4713 YCCC 471.709305 3 0.0012 1949 | 22/40
43 h-m-p 0.0004 0.0246 55.3326 YCCC 471.645534 3 0.0003 1997 | 22/40
44 h-m-p 0.0011 0.0259 13.3484 CCC 471.601547 2 0.0011 2044 | 22/40
45 h-m-p 0.0004 0.0055 34.6619 +YYCCCCC 471.373213 6 0.0020 2098 | 22/40
46 h-m-p 0.0002 0.0024 440.8083 +YCCC 469.651550 3 0.0015 2147 | 22/40
47 h-m-p 0.0001 0.0005 1318.2375 YCCCC 468.752543 4 0.0002 2197 | 22/40
48 h-m-p 0.0002 0.0010 105.0536 YCC 468.716036 2 0.0001 2243 | 22/40
49 h-m-p 0.0016 0.0080 3.0848 -CC 468.715428 1 0.0001 2289 | 22/40
50 h-m-p 0.0011 0.1134 0.4284 +YC 468.710629 1 0.0076 2334 | 22/40
51 h-m-p 0.0002 0.0249 20.4018 +++YCC 468.509367 2 0.0065 2401 | 22/40
52 h-m-p 0.0002 0.0019 625.8148 YCCC 468.135300 3 0.0004 2449 | 22/40
53 h-m-p 0.0040 0.0198 1.5190 -CC 468.135095 1 0.0002 2495 | 22/40
54 h-m-p 0.0116 5.7854 0.4336 ++++YCCC 467.646137 3 2.0171 2547 | 22/40
55 h-m-p 0.9190 4.5950 0.3711 CCCC 467.471615 3 1.1580 2614 | 22/40
56 h-m-p 1.3986 8.0000 0.3072 CYC 467.395601 2 1.1649 2678 | 22/40
57 h-m-p 1.6000 8.0000 0.2050 CCC 467.365833 2 2.0076 2743 | 22/40
58 h-m-p 1.6000 8.0000 0.0777 CCC 467.361637 2 1.3563 2808 | 22/40
59 h-m-p 1.6000 8.0000 0.0298 CC 467.359979 1 1.8177 2871 | 22/40
60 h-m-p 1.6000 8.0000 0.0006 CC 467.359040 1 1.8878 2934 | 22/40
61 h-m-p 0.0986 8.0000 0.0107 ++C 467.358700 0 1.4250 2997 | 22/40
62 h-m-p 1.6000 8.0000 0.0029 YC 467.358665 1 1.1565 3059 | 22/40
63 h-m-p 1.6000 8.0000 0.0002 C 467.358664 0 1.4358 3120 | 22/40
64 h-m-p 1.6000 8.0000 0.0001 C 467.358663 0 1.7285 3181 | 22/40
65 h-m-p 1.6000 8.0000 0.0000 C 467.358663 0 1.6043 3242 | 22/40
66 h-m-p 1.6000 8.0000 0.0000 C 467.358663 0 1.3840 3303 | 22/40
67 h-m-p 1.6000 8.0000 0.0000 Y 467.358663 0 0.9797 3364 | 22/40
68 h-m-p 1.6000 8.0000 0.0000 Y 467.358663 0 1.1606 3425 | 22/40
69 h-m-p 1.6000 8.0000 0.0000 ---------C 467.358663 0 0.0000 3495
Out..
lnL = -467.358663
3496 lfun, 10488 eigenQcodon, 258704 P(t)
end of tree file.
Time used: 1:09
Model 2: PositiveSelection
TREE # 1
(12, (18, 4, 14), (((11, 13, 17, 16, 27, 26, 1, 2, 6, 5, 7, 10, 24, 28), 3), ((22, 30, (8, 15, 9), 20, 19, 25, 23, 29), 21))); MP score: 20
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
33
0.030403 0.028129 0.045683 0.083992 0.093907 0.060889 0.071373 0.015621 0.057351 0.069303 0.013449 0.036602 0.076845 0.013356 0.105097 0.058498 0.096624 0.074467 0.079553 0.039034 0.026388 0.089394 0.056569 0.075328 0.027129 0.100837 0.027224 0.031791 0.078907 0.079431 0.048006 0.044881 0.078984 0.046810 0.030116 0.021899 0.093768 4.729005 1.744327 0.474598 0.164090 1.437837
ntime & nrate & np: 37 3 42
Bounds (np=42):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 4.029053
np = 42
lnL0 = -573.622857
Iterating by ming2
Initial: fx= 573.622857
x= 0.03040 0.02813 0.04568 0.08399 0.09391 0.06089 0.07137 0.01562 0.05735 0.06930 0.01345 0.03660 0.07684 0.01336 0.10510 0.05850 0.09662 0.07447 0.07955 0.03903 0.02639 0.08939 0.05657 0.07533 0.02713 0.10084 0.02722 0.03179 0.07891 0.07943 0.04801 0.04488 0.07898 0.04681 0.03012 0.02190 0.09377 4.72900 1.74433 0.47460 0.16409 1.43784
1 h-m-p 0.0000 0.0002 305.5688 +++ 552.136144 m 0.0002 48 | 1/42
2 h-m-p 0.0000 0.0001 1184.6019 ++ 536.114565 m 0.0001 93 | 2/42
3 h-m-p 0.0000 0.0000 4675.8133 ++ 530.643670 m 0.0000 138 | 3/42
4 h-m-p 0.0000 0.0000 7384.3298 ++ 524.601725 m 0.0000 183 | 4/42
5 h-m-p 0.0000 0.0000 1666.1109 ++ 521.972523 m 0.0000 228 | 5/42
6 h-m-p 0.0000 0.0002 218.0368 ++ 515.067967 m 0.0002 273 | 6/42
7 h-m-p 0.0000 0.0000 279.3674 ++ 514.731157 m 0.0000 318 | 7/42
8 h-m-p 0.0000 0.0000 2720.0396 ++ 512.752878 m 0.0000 363 | 8/42
9 h-m-p 0.0000 0.0000 13475.2545 ++ 512.680839 m 0.0000 408 | 9/42
10 h-m-p 0.0000 0.0001 361.8961 ++ 508.661499 m 0.0001 453 | 10/42
11 h-m-p 0.0000 0.0000 3912.3312 ++ 501.619061 m 0.0000 498 | 11/42
12 h-m-p 0.0000 0.0000 8316.2129 ++ 498.918806 m 0.0000 543 | 12/42
13 h-m-p 0.0000 0.0000 1787.1710 ++ 497.787553 m 0.0000 588 | 13/42
14 h-m-p 0.0000 0.0000 6367.2819 ++ 496.654276 m 0.0000 633 | 14/42
15 h-m-p 0.0000 0.0000 1767.0492 ++ 493.108526 m 0.0000 678 | 15/42
16 h-m-p 0.0000 0.0000 11016.2645 ++ 493.000188 m 0.0000 723 | 16/42
17 h-m-p 0.0000 0.0000 1362.8106 ++ 492.917171 m 0.0000 768 | 17/42
18 h-m-p 0.0000 0.0000 1505.5031 ++ 492.299449 m 0.0000 813 | 18/42
19 h-m-p 0.0000 0.0000 964.3654 ++ 491.918208 m 0.0000 858 | 19/42
20 h-m-p 0.0000 0.0000 870.2975 ++ 491.584536 m 0.0000 903 | 20/42
21 h-m-p 0.0000 0.0000 407.4648 ++ 490.944261 m 0.0000 948 | 21/42
22 h-m-p 0.0000 0.0000 303.4140 ++ 490.849883 m 0.0000 993 | 22/42
23 h-m-p 0.0000 0.0032 42.5378 +++YYCCCCC 484.476361 6 0.0028 1052 | 22/42
24 h-m-p 0.0001 0.0007 34.0567 +YYCCC 484.074097 4 0.0005 1104 | 22/42
25 h-m-p 0.0004 0.0040 43.6430 ++ 481.151674 m 0.0040 1149 | 22/42
26 h-m-p -0.0000 -0.0000 36.7702
h-m-p: -3.57926716e-19 -1.78963358e-18 3.67701710e+01 481.151674
.. | 22/42
27 h-m-p 0.0000 0.0008 272.6451 ++CYCCC 478.839429 4 0.0001 1245 | 22/42
28 h-m-p 0.0001 0.0007 105.6965 +YYYYYYYC 474.873748 7 0.0006 1298 | 22/42
29 h-m-p 0.0000 0.0001 232.8611 +YCYCCC 473.966687 5 0.0001 1352 | 22/42
30 h-m-p 0.0000 0.0002 175.3563 +YYCCCC 473.006313 5 0.0001 1406 | 22/42
31 h-m-p 0.0001 0.0003 300.5774 +YYYCCC 470.216165 5 0.0002 1459 | 22/42
32 h-m-p 0.0001 0.0005 66.2530 YCCC 470.012568 3 0.0002 1509 | 22/42
33 h-m-p 0.0001 0.0004 27.9584 ++ 469.807778 m 0.0004 1554 | 23/42
34 h-m-p 0.0003 0.0083 16.0561 +CCC 469.575369 2 0.0013 1604 | 23/42
35 h-m-p 0.0007 0.0073 28.7574 YCCC 469.481439 3 0.0004 1654 | 23/42
36 h-m-p 0.0005 0.0049 24.0906 CYC 469.409124 2 0.0005 1702 | 23/42
37 h-m-p 0.0012 0.0062 9.2626 YCC 469.394491 2 0.0005 1750 | 23/42
38 h-m-p 0.0006 0.0077 7.7731 CCC 469.384006 2 0.0007 1799 | 23/42
39 h-m-p 0.0005 0.0160 11.2290 +CCC 469.338916 2 0.0023 1849 | 23/42
40 h-m-p 0.0003 0.0050 101.4926 +CCCCC 469.017028 4 0.0017 1903 | 23/42
41 h-m-p 0.0002 0.0014 781.2022 +YC 468.268765 1 0.0006 1950 | 23/42
42 h-m-p 0.0008 0.0040 56.2065 CYC 468.247118 2 0.0002 1998 | 23/42
43 h-m-p 0.0034 0.0169 1.7757 -C 468.246785 0 0.0002 2044 | 22/42
44 h-m-p 0.0002 0.0817 12.2619 +YCCC 468.160402 3 0.0013 2095 | 22/42
45 h-m-p 0.0362 0.4545 0.4329 ++ 467.789611 m 0.4545 2140 | 23/42
46 h-m-p 0.2843 1.4215 0.2044 YCCCCC 467.457418 5 0.5878 2214 | 23/42
47 h-m-p 1.0048 5.0242 0.1057 YCC 467.396531 2 0.7071 2281 | 23/42
48 h-m-p 1.2945 8.0000 0.0577 CYC 467.377880 2 1.4402 2348 | 23/42
49 h-m-p 1.0361 8.0000 0.0803 CC 467.363698 1 1.5640 2414 | 22/42
50 h-m-p 1.1718 8.0000 0.1071 CCC 467.353800 2 1.2102 2482 | 22/42
51 h-m-p 0.5204 8.0000 0.2491 +YYC 467.328784 2 1.9354 2550 | 22/42
52 h-m-p 0.5247 8.0000 0.9188 YCCC 467.271981 3 1.0669 2620 | 22/42
53 h-m-p 1.2245 8.0000 0.8006 CCC 467.150402 2 1.6734 2689 | 22/42
54 h-m-p 0.7855 3.9274 0.3704 YYCC 467.097386 3 0.5983 2758 | 22/42
55 h-m-p 0.3751 8.0000 0.5908 +CCC 467.048019 2 1.7253 2828 | 22/42
56 h-m-p 1.6000 8.0000 0.4448 CYC 467.017558 2 1.9001 2896 | 22/42
57 h-m-p 1.6000 8.0000 0.3246 CC 467.001418 1 1.3963 2963 | 22/42
58 h-m-p 1.6000 8.0000 0.1995 YC 466.997964 1 1.2144 3029 | 22/42
59 h-m-p 1.6000 8.0000 0.0800 CC 466.995029 1 1.8955 3096 | 22/42
60 h-m-p 1.6000 8.0000 0.0492 CC 466.993465 1 1.8620 3163 | 22/42
61 h-m-p 1.6000 8.0000 0.0337 CC 466.992810 1 1.8323 3230 | 22/42
62 h-m-p 1.6000 8.0000 0.0207 YC 466.992339 1 2.9415 3296 | 22/42
63 h-m-p 1.6000 8.0000 0.0181 YC 466.991989 1 3.0713 3362 | 22/42
64 h-m-p 1.6000 8.0000 0.0312 +C 466.990994 0 6.3859 3428 | 22/42
65 h-m-p 1.6000 8.0000 0.1210 +YC 466.988590 1 4.1810 3495 | 22/42
66 h-m-p 1.6000 8.0000 0.2607 YC 466.985070 1 3.4876 3561 | 22/42
67 h-m-p 1.6000 8.0000 0.3565 CC 466.983367 1 2.2456 3628 | 22/42
68 h-m-p 1.6000 8.0000 0.3403 YC 466.982843 1 2.5105 3694 | 22/42
69 h-m-p 1.6000 8.0000 0.2914 YC 466.982576 1 2.9269 3760 | 22/42
70 h-m-p 1.6000 8.0000 0.3666 CC 466.982449 1 2.3525 3827 | 22/42
71 h-m-p 1.6000 8.0000 0.3358 YC 466.982405 1 2.7383 3893 | 22/42
72 h-m-p 1.6000 8.0000 0.3564 Y 466.982384 0 2.5727 3958 | 22/42
73 h-m-p 1.6000 8.0000 0.3342 C 466.982377 0 2.4156 4023 | 22/42
74 h-m-p 1.6000 8.0000 0.3440 Y 466.982374 0 2.7205 4088 | 22/42
75 h-m-p 1.6000 8.0000 0.3507 C 466.982372 0 2.3788 4153 | 22/42
76 h-m-p 1.6000 8.0000 0.3440 Y 466.982372 0 2.6550 4218 | 22/42
77 h-m-p 1.6000 8.0000 0.3543 C 466.982372 0 2.5033 4283 | 22/42
78 h-m-p 1.6000 8.0000 0.3412 C 466.982371 0 2.4672 4348 | 22/42
79 h-m-p 1.6000 8.0000 0.3646 Y 466.982371 0 2.8560 4413 | 22/42
80 h-m-p 1.6000 8.0000 0.3174 C 466.982371 0 1.9952 4478 | 22/42
81 h-m-p 1.6000 8.0000 0.3747 +Y 466.982371 0 4.4093 4544 | 22/42
82 h-m-p 1.6000 8.0000 0.2003 Y 466.982371 0 1.2399 4609 | 22/42
83 h-m-p 0.6701 8.0000 0.3707 +C 466.982371 0 2.6802 4675 | 22/42
84 h-m-p 1.4076 8.0000 0.7058 +Y 466.982371 0 3.5898 4741 | 22/42
85 h-m-p 1.6000 8.0000 0.4977 Y 466.982371 0 0.8084 4806 | 22/42
86 h-m-p 1.2816 8.0000 0.3140 ---C 466.982371 0 0.0050 4874 | 22/42
87 h-m-p 0.7927 8.0000 0.0020 --Y 466.982371 0 0.0124 4941 | 22/42
88 h-m-p 0.0160 8.0000 0.0111 -------------.. | 22/42
89 h-m-p 0.0160 8.0000 0.0003 --C 466.982371 0 0.0002 5084
Out..
lnL = -466.982371
5085 lfun, 20340 eigenQcodon, 564435 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -473.974978 S = -452.310625 -47.054528
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 49 patterns 3:40
did 20 / 49 patterns 3:40
did 30 / 49 patterns 3:40
did 40 / 49 patterns 3:40
did 49 / 49 patterns 3:40end of tree file.
Time used: 3:40
Model 7: beta
TREE # 1
(12, (18, 4, 14), (((11, 13, 17, 16, 27, 26, 1, 2, 6, 5, 7, 10, 24, 28), 3), ((22, 30, (8, 15, 9), 20, 19, 25, 23, 29), 21))); MP score: 20
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
33
0.047861 0.061488 0.014743 0.029694 0.021173 0.087170 0.073926 0.043995 0.041195 0.097128 0.064650 0.064883 0.096257 0.013773 0.075034 0.057644 0.099138 0.012040 0.044229 0.060879 0.048900 0.081450 0.100767 0.071358 0.031296 0.070870 0.032452 0.070186 0.062443 0.076940 0.079985 0.088713 0.055442 0.012084 0.021497 0.087635 0.064632 5.557426 0.730467 1.802008
ntime & nrate & np: 37 1 40
Bounds (np=40):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 4.798434
np = 40
lnL0 = -585.022471
Iterating by ming2
Initial: fx= 585.022471
x= 0.04786 0.06149 0.01474 0.02969 0.02117 0.08717 0.07393 0.04400 0.04119 0.09713 0.06465 0.06488 0.09626 0.01377 0.07503 0.05764 0.09914 0.01204 0.04423 0.06088 0.04890 0.08145 0.10077 0.07136 0.03130 0.07087 0.03245 0.07019 0.06244 0.07694 0.07998 0.08871 0.05544 0.01208 0.02150 0.08763 0.06463 5.55743 0.73047 1.80201
1 h-m-p 0.0000 0.0002 343.2773 +++ 563.136784 m 0.0002 46 | 1/40
2 h-m-p 0.0000 0.0000 386.7433 ++ 562.257752 m 0.0000 89 | 2/40
3 h-m-p 0.0000 0.0005 168.5045 +++ 551.138251 m 0.0005 133 | 3/40
4 h-m-p 0.0000 0.0000 438.9958 ++ 548.440394 m 0.0000 176 | 4/40
5 h-m-p 0.0001 0.0003 304.3081 +CYCCC 539.914316 4 0.0002 227 | 4/40
6 h-m-p 0.0000 0.0000 480.5128 ++ 538.155694 m 0.0000 270 | 5/40
7 h-m-p 0.0000 0.0000 1192.1726 ++ 529.452959 m 0.0000 313 | 6/40
8 h-m-p 0.0000 0.0000 2042.3514 ++ 527.160690 m 0.0000 356 | 7/40
9 h-m-p 0.0000 0.0000 1751.3465 +YYCCCC 519.867501 5 0.0000 409 | 7/40
10 h-m-p 0.0000 0.0000 2931.6932 ++ 514.181225 m 0.0000 452 | 8/40
11 h-m-p 0.0000 0.0000 1752.9645 ++ 511.188051 m 0.0000 495 | 9/40
12 h-m-p 0.0000 0.0000 11484.4777 ++ 506.946347 m 0.0000 538 | 10/40
13 h-m-p 0.0000 0.0000 14636.2860 ++ 497.440663 m 0.0000 581 | 11/40
14 h-m-p 0.0000 0.0000 3524.2261 ++ 494.485099 m 0.0000 624 | 12/40
15 h-m-p 0.0000 0.0000 4096.6063 ++ 493.869443 m 0.0000 667 | 13/40
16 h-m-p 0.0000 0.0000 1669.9174 ++ 493.537079 m 0.0000 710 | 14/40
17 h-m-p 0.0000 0.0001 226.5352 ++ 489.046044 m 0.0001 753 | 14/40
18 h-m-p -0.0000 -0.0000 553428.2810
h-m-p: -1.53325192e-25 -7.66625958e-25 5.53428281e+05 489.046044
.. | 14/40
19 h-m-p 0.0000 0.0000 1286.4576 ++ 482.461007 m 0.0000 836 | 15/40
20 h-m-p 0.0000 0.0001 302.5569 ++ 477.797296 m 0.0001 879 | 16/40
21 h-m-p 0.0000 0.0000 567.4471 ++ 477.157945 m 0.0000 922 | 17/40
22 h-m-p 0.0000 0.0000 15073.8953 ++ 476.242445 m 0.0000 965 | 18/40
23 h-m-p 0.0000 0.0000 1388361.8755 ++ 471.247545 m 0.0000 1008 | 19/40
24 h-m-p 0.0000 0.0000 286.3708 ++ 471.002997 m 0.0000 1051 | 20/40
25 h-m-p 0.0000 0.0000 356.6693 ++ 470.614182 m 0.0000 1094 | 21/40
26 h-m-p 0.0000 0.0000 1228.6139 ++ 470.503648 m 0.0000 1137 | 22/40
27 h-m-p 0.0000 0.0011 34.3826 ++CCCC 470.410453 3 0.0002 1188 | 22/40
28 h-m-p 0.0004 0.0045 18.3897 CCC 470.326813 2 0.0005 1235 | 22/40
29 h-m-p 0.0004 0.0025 26.0630 YCC 470.276835 2 0.0003 1281 | 22/40
30 h-m-p 0.0004 0.0023 17.4985 YC 470.260305 1 0.0002 1325 | 22/40
31 h-m-p 0.0002 0.0148 13.9816 +CCC 470.195458 2 0.0013 1373 | 22/40
32 h-m-p 0.0002 0.0037 124.5159 +YCCCC 469.546251 4 0.0014 1424 | 22/40
33 h-m-p 0.0001 0.0004 1112.3577 YCYCCCC 468.562039 6 0.0002 1477 | 22/40
34 h-m-p 0.0001 0.0007 157.3736 YCC 468.517059 2 0.0001 1523 | 22/40
35 h-m-p 0.0020 0.0102 2.7152 CC 468.513215 1 0.0006 1568 | 22/40
36 h-m-p 0.0001 0.0095 16.6753 +YC 468.478490 1 0.0008 1613 | 22/40
37 h-m-p 0.0004 0.0048 35.0834 CCC 468.466661 2 0.0001 1660 | 22/40
38 h-m-p 0.0057 1.8095 0.8567 +++CCCC 467.859857 3 0.5033 1712 | 22/40
39 h-m-p 0.0829 0.4146 0.3022 YC 467.836021 1 0.0380 1774 | 22/40
40 h-m-p 0.0453 3.1377 0.2535 ++YYCC 467.703104 3 0.5466 1841 | 22/40
41 h-m-p 1.0211 8.0000 0.1357 C 467.670636 0 1.0211 1902 | 22/40
42 h-m-p 0.7066 8.0000 0.1961 +YCC 467.625123 2 1.8717 1967 | 22/40
43 h-m-p 0.8642 5.9046 0.4247 CCCCC 467.567339 4 1.0868 2036 | 22/40
44 h-m-p 0.4855 2.4273 0.6457 YCYCCC 467.481809 5 1.2242 2105 | 22/40
45 h-m-p 0.4257 2.1286 0.3468 YYCCCC 467.458470 5 0.4722 2174 | 22/40
46 h-m-p 0.5232 2.6158 0.2953 YYC 467.432340 2 0.4317 2237 | 22/40
47 h-m-p 0.3553 8.0000 0.3587 CYC 467.422753 2 0.4589 2301 | 22/40
48 h-m-p 0.7362 3.6808 0.1676 CCC 467.412885 2 0.8289 2366 | 22/40
49 h-m-p 1.4725 8.0000 0.0943 YC 467.408169 1 0.9955 2428 | 22/40
50 h-m-p 1.6000 8.0000 0.0406 CC 467.405673 1 1.6823 2491 | 22/40
51 h-m-p 1.6000 8.0000 0.0315 CC 467.404775 1 1.2966 2554 | 22/40
52 h-m-p 1.6000 8.0000 0.0110 YC 467.404589 1 1.0020 2616 | 22/40
53 h-m-p 1.6000 8.0000 0.0026 C 467.404555 0 1.3541 2677 | 22/40
54 h-m-p 1.6000 8.0000 0.0008 C 467.404550 0 1.3107 2738 | 22/40
55 h-m-p 1.3749 8.0000 0.0008 Y 467.404548 0 2.5310 2799 | 22/40
56 h-m-p 1.6000 8.0000 0.0011 C 467.404546 0 1.6606 2860 | 22/40
57 h-m-p 1.6000 8.0000 0.0004 C 467.404546 0 1.3362 2921 | 22/40
58 h-m-p 1.6000 8.0000 0.0001 Y 467.404546 0 1.2391 2982 | 22/40
59 h-m-p 1.6000 8.0000 0.0000 C 467.404546 0 1.3922 3043 | 22/40
60 h-m-p 1.6000 8.0000 0.0000 C 467.404546 0 0.5808 3104 | 22/40
61 h-m-p 1.6000 8.0000 0.0000 Y 467.404546 0 0.2726 3165 | 22/40
62 h-m-p 0.3747 8.0000 0.0000 Y 467.404546 0 0.3747 3226 | 22/40
63 h-m-p 0.6110 8.0000 0.0000 --------------C 467.404546 0 0.0000 3301
Out..
lnL = -467.404546
3302 lfun, 36322 eigenQcodon, 1221740 P(t)
end of tree file.
Time used: 9:06
Model 8: beta&w>1
TREE # 1
(12, (18, 4, 14), (((11, 13, 17, 16, 27, 26, 1, 2, 6, 5, 7, 10, 24, 28), 3), ((22, 30, (8, 15, 9), 20, 19, 25, 23, 29), 21))); MP score: 20
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
33
0.097703 0.037173 0.025901 0.042326 0.045503 0.076639 0.078448 0.067539 0.062728 0.098306 0.025971 0.109028 0.052380 0.030836 0.031250 0.035446 0.060345 0.094025 0.014806 0.081899 0.075783 0.057319 0.086290 0.052154 0.058752 0.058779 0.042959 0.049282 0.068527 0.039180 0.046191 0.076889 0.041034 0.020935 0.061951 0.028152 0.038843 4.723833 0.900000 0.465317 1.161700 1.300000
ntime & nrate & np: 37 2 42
Bounds (np=42):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 4.600079
np = 42
lnL0 = -567.081224
Iterating by ming2
Initial: fx= 567.081224
x= 0.09770 0.03717 0.02590 0.04233 0.04550 0.07664 0.07845 0.06754 0.06273 0.09831 0.02597 0.10903 0.05238 0.03084 0.03125 0.03545 0.06035 0.09402 0.01481 0.08190 0.07578 0.05732 0.08629 0.05215 0.05875 0.05878 0.04296 0.04928 0.06853 0.03918 0.04619 0.07689 0.04103 0.02093 0.06195 0.02815 0.03884 4.72383 0.90000 0.46532 1.16170 1.30000
1 h-m-p 0.0000 0.0003 287.0830 +++ 544.952294 m 0.0003 48 | 1/42
2 h-m-p 0.0000 0.0000 31686.4565 ++ 535.078821 m 0.0000 93 | 2/42
3 h-m-p 0.0000 0.0000 21378.1805 ++ 528.269885 m 0.0000 138 | 3/42
4 h-m-p 0.0000 0.0000 7043.0869 ++ 521.690563 m 0.0000 183 | 4/42
5 h-m-p 0.0000 0.0000 1481.4666 ++ 521.113651 m 0.0000 228 | 5/42
6 h-m-p 0.0000 0.0000 4854.0163 ++ 510.190922 m 0.0000 273 | 6/42
7 h-m-p 0.0000 0.0000 125426.2112 ++ 506.947878 m 0.0000 318 | 7/42
8 h-m-p 0.0000 0.0000 24053.7408 ++ 506.322859 m 0.0000 363 | 8/42
9 h-m-p 0.0000 0.0000 11666.5308 ++ 502.785691 m 0.0000 408 | 9/42
10 h-m-p 0.0000 0.0000 7943.2697 ++ 501.950698 m 0.0000 453 | 10/42
11 h-m-p 0.0000 0.0000 5954.4687 ++ 496.625834 m 0.0000 498 | 11/42
12 h-m-p 0.0000 0.0000 5815.4987 ++ 492.258408 m 0.0000 543 | 12/42
13 h-m-p 0.0000 0.0000 4757.1045 ++ 489.855245 m 0.0000 588 | 13/42
14 h-m-p 0.0000 0.0000 2729.7374 ++ 488.160609 m 0.0000 633 | 14/42
15 h-m-p 0.0000 0.0000 2469.2650 ++ 487.223739 m 0.0000 678 | 15/42
16 h-m-p 0.0000 0.0000 3533.1654 ++ 484.153545 m 0.0000 723 | 16/42
17 h-m-p 0.0000 0.0000 1348.0336 ++ 481.253427 m 0.0000 768 | 17/42
18 h-m-p 0.0000 0.0000 1248.1900 ++ 479.703253 m 0.0000 813 | 18/42
19 h-m-p 0.0000 0.0000 2185.5792 ++ 478.946083 m 0.0000 858 | 19/42
20 h-m-p 0.0000 0.0000 672.8416 ++ 476.000423 m 0.0000 903 | 20/42
21 h-m-p 0.0000 0.0000 394.1579 ++ 475.291361 m 0.0000 948 | 21/42
22 h-m-p 0.0000 0.0001 198.1504 ++ 474.274875 m 0.0001 993 | 22/42
23 h-m-p 0.0001 0.0017 47.5314 +CYCCCC 472.764316 5 0.0009 1048 | 22/42
24 h-m-p 0.0004 0.0021 29.0906 CCYC 472.587345 3 0.0004 1098 | 22/42
25 h-m-p 0.0010 0.0094 12.8527 YCCC 472.261154 3 0.0019 1148 | 22/42
26 h-m-p 0.0007 0.0036 20.1189 CCCC 472.053453 3 0.0010 1199 | 22/42
27 h-m-p 0.0005 0.0061 42.4795 +CCCCC 470.035431 4 0.0041 1254 | 22/42
28 h-m-p 0.0015 0.0076 35.2083 YCYCCC 468.796882 5 0.0039 1307 | 22/42
29 h-m-p 0.0012 0.0058 20.2813 CYCCC 468.594788 4 0.0016 1359 | 22/42
30 h-m-p 0.0123 0.0614 2.2708 YCCCC 468.432251 4 0.0234 1411 | 22/42
31 h-m-p 0.0037 0.0184 4.6881 +YC 468.320157 1 0.0111 1458 | 22/42
32 h-m-p 0.0033 0.0164 3.7562 ++ 468.136428 m 0.0164 1503 | 22/42
33 h-m-p 0.0000 0.0000 5.7909
h-m-p: 0.00000000e+00 0.00000000e+00 5.79089444e+00 468.136428
.. | 22/42
34 h-m-p 0.0000 0.0006 119.8650 +YCCCC 467.620047 4 0.0001 1598 | 22/42
35 h-m-p 0.0001 0.0007 34.3056 CCCCC 467.522540 4 0.0002 1651 | 22/42
36 h-m-p 0.0006 0.0045 9.1131 YCC 467.509285 2 0.0003 1699 | 22/42
37 h-m-p 0.0006 0.0179 5.4439 CC 467.503665 1 0.0005 1746 | 22/42
38 h-m-p 0.0003 0.0116 10.3029 YC 467.495946 1 0.0004 1792 | 22/42
39 h-m-p 0.0006 0.0224 7.1159 YC 467.483737 1 0.0013 1838 | 22/42
40 h-m-p 0.0004 0.0096 25.7236 CY 467.472025 1 0.0004 1885 | 22/42
41 h-m-p 0.0007 0.0102 12.7319 YC 467.463743 1 0.0006 1931 | 22/42
42 h-m-p 0.0005 0.0098 15.8052 YC 467.447816 1 0.0009 1977 | 22/42
43 h-m-p 0.0002 0.0023 58.8746 +YCCC 467.401120 3 0.0007 2028 | 22/42
44 h-m-p 0.0015 0.0077 4.3230 -CC 467.400580 1 0.0002 2076 | 22/42
45 h-m-p 0.0024 0.1952 0.2755 Y 467.400561 0 0.0004 2121 | 22/42
46 h-m-p 0.0016 0.8156 0.4860 ++YC 467.399329 1 0.0192 2189 | 22/42
47 h-m-p 0.0002 0.0483 56.8508 +YC 467.387261 1 0.0015 2256 | 22/42
48 h-m-p 0.0026 0.0131 15.5950 -CC 467.386966 1 0.0001 2304 | 22/42
49 h-m-p 0.0474 0.9411 0.0477 --Y 467.386961 0 0.0013 2351 | 22/42
50 h-m-p 0.0022 1.1034 0.2733 +++CCC 467.378131 2 0.2252 2423 | 22/42
51 h-m-p 0.0031 0.0157 6.9764 -YC 467.378000 1 0.0001 2490 | 22/42
52 h-m-p 0.0117 5.8200 0.0846 ++C 467.377320 0 0.1729 2537 | 22/42
53 h-m-p 0.0001 0.0072 106.6320 ++YYCCCC 467.363116 5 0.0024 2612 | 22/42
54 h-m-p 0.9431 5.9763 0.2672 YCYCCC 467.326162 5 2.2970 2665 | 22/42
55 h-m-p 0.5166 8.0000 1.1879 CCC 467.308033 2 0.1983 2734 | 22/42
56 h-m-p 0.2207 2.5088 1.0674 +YCCCCC 467.229950 5 1.0299 2789 | 22/42
57 h-m-p 1.2598 8.0000 0.8727 CYC 467.155583 2 1.3362 2837 | 22/42
58 h-m-p 0.4869 2.4347 1.7267 CCCCC 467.124864 4 0.5534 2910 | 22/42
59 h-m-p 1.6000 8.0000 0.4539 CC 467.100090 1 1.6160 2957 | 22/42
60 h-m-p 1.6000 8.0000 0.1830 CC 467.093792 1 2.2495 3024 | 22/42
61 h-m-p 1.6000 8.0000 0.1088 CYC 467.089254 2 1.6783 3092 | 22/42
62 h-m-p 1.4521 8.0000 0.1258 CC 467.085860 1 1.7594 3159 | 22/42
63 h-m-p 1.6000 8.0000 0.0603 YC 467.083587 1 3.3306 3225 | 22/42
64 h-m-p 1.6000 8.0000 0.0716 ++ 467.075473 m 8.0000 3290 | 22/42
65 h-m-p 1.6000 8.0000 0.1739 YCC 467.068001 2 3.1891 3358 | 22/42
66 h-m-p 1.6000 8.0000 0.2620 +CC 467.060048 1 5.8007 3426 | 22/42
67 h-m-p 1.6000 8.0000 0.5900 ++ 467.031848 m 8.0000 3491 | 22/42
68 h-m-p 1.6000 8.0000 1.8532 CC 467.017261 1 2.0172 3558 | 22/42
69 h-m-p 1.6000 8.0000 2.0904 +YCC 467.006091 2 4.6136 3607 | 22/42
70 h-m-p 1.6000 8.0000 3.9316 CYC 466.998688 2 2.1128 3655 | 22/42
71 h-m-p 1.6000 8.0000 4.6929 YC 466.993653 1 3.8929 3701 | 22/42
72 h-m-p 1.2211 6.1057 7.9217 YC 466.990248 1 2.2649 3747 | 22/42
73 h-m-p 0.5926 2.9628 10.2684 ++ 466.987754 m 2.9628 3792 | 22/42
74 h-m-p 0.0000 0.0000 20.3595
h-m-p: 0.00000000e+00 0.00000000e+00 2.03594670e+01 466.987754
.. | 22/42
75 h-m-p 0.0001 0.0278 1.6862 YC 466.987582 1 0.0001 3880 | 22/42
76 h-m-p 0.0014 0.1870 0.1501 -Y 466.987580 0 0.0002 3926 | 22/42
77 h-m-p 0.0015 0.7662 0.0510 Y 466.987579 0 0.0002 3991 | 22/42
78 h-m-p 0.0026 1.3181 0.0312 -Y 466.987579 0 0.0003 4057 | 22/42
79 h-m-p 0.0067 3.3724 0.0143 -C 466.987579 0 0.0004 4123 | 22/42
80 h-m-p 0.0110 5.4904 0.0112 -Y 466.987579 0 0.0004 4189 | 22/42
81 h-m-p 0.0160 8.0000 0.0044 --Y 466.987579 0 0.0004 4256 | 22/42
82 h-m-p 0.0160 8.0000 0.0075 Y 466.987579 0 0.0020 4321 | 22/42
83 h-m-p 0.0160 8.0000 0.0670 C 466.987579 0 0.0048 4386 | 22/42
84 h-m-p 0.0034 1.6922 1.3111 Y 466.987574 0 0.0026 4451 | 22/42
85 h-m-p 0.0010 0.4840 19.4114 YC 466.987532 1 0.0017 4497 | 22/42
86 h-m-p 0.0009 0.1435 36.7002 C 466.987517 0 0.0003 4542 | 22/42
87 h-m-p 0.0163 1.4711 0.7099 --Y 466.987517 0 0.0002 4589 | 22/42
88 h-m-p 0.0668 8.0000 0.0019 -Y 466.987517 0 0.0021 4655 | 22/42
89 h-m-p 0.0160 8.0000 0.0232 ++Y 466.987510 0 0.4174 4722 | 22/42
90 h-m-p 0.0168 0.5672 0.5765 --Y 466.987510 0 0.0002 4789 | 22/42
91 h-m-p 0.0163 8.0000 0.0061 +++Y 466.987506 0 0.8817 4857 | 22/42
92 h-m-p 0.0006 0.3172 22.2254 C 466.987498 0 0.0006 4922 | 22/42
93 h-m-p 1.6000 8.0000 0.0010 -----Y 466.987498 0 0.0003 4972 | 22/42
94 h-m-p 0.0160 8.0000 0.0008 ++Y 466.987498 0 0.4786 5039 | 22/42
95 h-m-p 0.0214 1.8853 0.0184 ++C 466.987497 0 0.3281 5106 | 22/42
96 h-m-p 1.2740 6.3700 0.0036 Y 466.987495 0 2.7502 5171 | 22/42
97 h-m-p 1.6000 8.0000 0.0001 ++ 466.987495 m 8.0000 5236 | 22/42
98 h-m-p 0.1084 0.5420 0.0026 ++ 466.987494 m 0.5420 5301 | 23/42
99 h-m-p 0.7038 8.0000 0.0013 C 466.987494 0 1.0807 5366 | 23/42
100 h-m-p 1.6000 8.0000 0.0002 C 466.987494 0 1.3470 5430 | 23/42
101 h-m-p 1.6000 8.0000 0.0000 C 466.987494 0 2.1779 5494 | 23/42
102 h-m-p 1.6000 8.0000 0.0000 --C 466.987494 0 0.0290 5560 | 23/42
103 h-m-p 0.0287 8.0000 0.0000 ----Y 466.987494 0 0.0000 5628
Out..
lnL = -466.987494
5629 lfun, 67548 eigenQcodon, 2291003 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -473.234093 S = -452.322411 -17.381595
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 49 patterns 19:18
did 20 / 49 patterns 19:18
did 30 / 49 patterns 19:18
did 40 / 49 patterns 19:18
did 49 / 49 patterns 19:18end of tree file.
Time used: 19:18
The loglikelihoods for models M1, M2, M7 and M8 are -467.358663 -466.982371 -467.404546 -466.987494 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
MY_U710_12_nsp4_VIPR_ALG4_AQN78701_1_11718_11984_1_2012_06_20_Malaysia_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
OC43_human_USA_901_54_1990_nsp4_VIPR_ALG4_530802467_11699_11965_1_1990_01_23_USA_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
OC43_human_USA_901_41_1990_nsp4_VIPR_ALG4_530802215_11699_11965_1_1990_01_17_USA_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLSVAFEKLAQLLIVLF
PHEV_CoV_swine_USA_15TOSU1655_2015_nsp4_VIPR_ALG4_ARC95241_1_11720_11986_1_2015_08_01_USA_Swine_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLSVAFEKLAQLLIVLF
2145A_2010_nsp4_VIPR_ALG4_701216631_11718_11984_1_2010_07_China_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
MDS11_nsp4_VIPR_ALG4_QBP84728_1_11698_11964_1_NA_NA_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
OC43_human_USA_913_29_1991_nsp4_VIPR_ALG4_530802368_11699_11965_1_1991_03_14_USA_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
UNKNOWN_FJ425189_nsp4_VIPR_ALG4_215478151_11689_11955_1_1994_01_01_USA_Deer_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLF
E_AH187_TC_nsp4_VIPR_ALG4_251748090_11703_11969_1_2000_01_01_USA_Cattle_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLF
10290_2010_nsp4_VIPR_ALG4_701216883_11718_11984_1_2010_07_China_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
12694_2012_nsp4_VIPR_ALG4_701216743_11718_11984_1_2012_05_China_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
PHEV_CoV_swine_USA_15TOSU0582_2015_nsp4_VIPR_ALG4_ARC95217_1_11680_11946_1_2015_08_20_USA_Swine_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
BJ_124_nsp4_VIPR_ALG4_AXX83300_1_11623_11889_1_2015_05_06_China_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
PHEV_CoV_swine_USA_15TOSU1785_2015_nsp4_VIPR_ALG4_ARC95225_1_11680_11946_1_2015_08_15_USA_Swine_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLSVAFEKLAQLLIVLF
R_AH65_TC_nsp4_VIPR_ALG4_145208921_11703_11969_1_NA_USA_Cattle_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLF
OC43_human_USA_912_10_1991_nsp4_VIPR_ALG4_530802237_11712_11978_1_1991_02_07_USA_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
10574_2010_nsp4_VIPR_ALG4_701216890_11718_11984_1_2010_09_China_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIILF
PHEV_CoV_swine_USA_15TOSU1209_2015_nsp4_VIPR_ALG4_ARC95233_1_11680_11946_1_2015_07_25_USA_Swine_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLSVAFEKLAQLLIVLF
TCG_26_nsp4_VIPR_ALG4_BBM61504_1_11692_11958_1_2017_12_Japan_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLF
TCG_25_nsp4_VIPR_ALG4_BBM61494_1_11690_11956_1_2017_12_Japan_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLF
4_17_03_nsp4_VIPR_ALG4_AVZ61096_1_11719_11985_1_2017_04_USA_Cattle_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLSVAFEKLAQLLIVLF
TCG_8_nsp4_VIPR_ALG4_BBM61394_1_11692_11958_1_2008_01_Japan_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLF
TCG_9_nsp4_VIPR_ALG4_BBM61424_1_11680_11946_1_2008_03_Japan_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLF
TNP_12636_nsp4_VIPR_ALG4_AWW13571_1_11712_11978_1_2016_12_10_Cote_dIvoire_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
TCG_29_nsp4_VIPR_ALG4_BBM61534_1_11692_11958_1_2017_12_Japan_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLF
892A_2008_nsp4_VIPR_ALG4_701216876_11718_11984_1_2008_10_China_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
5484_2007_nsp4_VIPR_ALG4_701216799_11718_11984_1_2007_06_China_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
HCoV_OC43_Seattle_USA_SC2476_2015_nsp4_VIPR_ALG4_ARK08667_1_11680_11946_1_2015_USA_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLF
7_16_23_nsp4_VIPR_ALG4_AVZ61126_1_11719_11985_1_2016_07_USA_Cattle_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLF
DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLF
*****************************:***************.***********:**
MY_U710_12_nsp4_VIPR_ALG4_AQN78701_1_11718_11984_1_2012_06_20_Malaysia_Human_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
OC43_human_USA_901_54_1990_nsp4_VIPR_ALG4_530802467_11699_11965_1_1990_01_23_USA_Human_Betacoronavirus_1 ANPAAVDSKCLASIEEVCDDYAKDNTVLQ
OC43_human_USA_901_41_1990_nsp4_VIPR_ALG4_530802215_11699_11965_1_1990_01_17_USA_Human_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
PHEV_CoV_swine_USA_15TOSU1655_2015_nsp4_VIPR_ALG4_ARC95241_1_11720_11986_1_2015_08_01_USA_Swine_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
2145A_2010_nsp4_VIPR_ALG4_701216631_11718_11984_1_2010_07_China_Human_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
MDS11_nsp4_VIPR_ALG4_QBP84728_1_11698_11964_1_NA_NA_Unknown_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
OC43_human_USA_913_29_1991_nsp4_VIPR_ALG4_530802368_11699_11965_1_1991_03_14_USA_Human_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
UNKNOWN_FJ425189_nsp4_VIPR_ALG4_215478151_11689_11955_1_1994_01_01_USA_Deer_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
E_AH187_TC_nsp4_VIPR_ALG4_251748090_11703_11969_1_2000_01_01_USA_Cattle_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
10290_2010_nsp4_VIPR_ALG4_701216883_11718_11984_1_2010_07_China_Human_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
12694_2012_nsp4_VIPR_ALG4_701216743_11718_11984_1_2012_05_China_Human_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
PHEV_CoV_swine_USA_15TOSU0582_2015_nsp4_VIPR_ALG4_ARC95217_1_11680_11946_1_2015_08_20_USA_Swine_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
BJ_124_nsp4_VIPR_ALG4_AXX83300_1_11623_11889_1_2015_05_06_China_Unknown_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
PHEV_CoV_swine_USA_15TOSU1785_2015_nsp4_VIPR_ALG4_ARC95225_1_11680_11946_1_2015_08_15_USA_Swine_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
R_AH65_TC_nsp4_VIPR_ALG4_145208921_11703_11969_1_NA_USA_Cattle_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
OC43_human_USA_912_10_1991_nsp4_VIPR_ALG4_530802237_11712_11978_1_1991_02_07_USA_Human_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
10574_2010_nsp4_VIPR_ALG4_701216890_11718_11984_1_2010_09_China_Human_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
PHEV_CoV_swine_USA_15TOSU1209_2015_nsp4_VIPR_ALG4_ARC95233_1_11680_11946_1_2015_07_25_USA_Swine_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
TCG_26_nsp4_VIPR_ALG4_BBM61504_1_11692_11958_1_2017_12_Japan_Unknown_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
TCG_25_nsp4_VIPR_ALG4_BBM61494_1_11690_11956_1_2017_12_Japan_Unknown_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
4_17_03_nsp4_VIPR_ALG4_AVZ61096_1_11719_11985_1_2017_04_USA_Cattle_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
TCG_8_nsp4_VIPR_ALG4_BBM61394_1_11692_11958_1_2008_01_Japan_Unknown_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYVKDNTVLQ
TCG_9_nsp4_VIPR_ALG4_BBM61424_1_11680_11946_1_2008_03_Japan_Unknown_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
TNP_12636_nsp4_VIPR_ALG4_AWW13571_1_11712_11978_1_2016_12_10_Cote_dIvoire_Human_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
TCG_29_nsp4_VIPR_ALG4_BBM61534_1_11692_11958_1_2017_12_Japan_Unknown_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
892A_2008_nsp4_VIPR_ALG4_701216876_11718_11984_1_2008_10_China_Human_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
5484_2007_nsp4_VIPR_ALG4_701216799_11718_11984_1_2007_06_China_Human_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
HCoV_OC43_Seattle_USA_SC2476_2015_nsp4_VIPR_ALG4_ARK08667_1_11680_11946_1_2015_USA_Human_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
7_16_23_nsp4_VIPR_ALG4_AVZ61126_1_11719_11985_1_2016_07_USA_Cattle_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1 ANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
***********:*********.*******
>MY_U710_12_nsp4_VIPR_ALG4_AQN78701_1_11718_11984_1_2012_06_20_Malaysia_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >OC43_human_USA_901_54_1990_nsp4_VIPR_ALG4_530802467_11699_11965_1_1990_01_23_USA_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGGCTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >OC43_human_USA_901_41_1990_nsp4_VIPR_ALG4_530802215_11699_11965_1_1990_01_17_USA_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAACTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >PHEV_CoV_swine_USA_15TOSU1655_2015_nsp4_VIPR_ALG4_ARC95241_1_11720_11986_1_2015_08_01_USA_Swine_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAACTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATTTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTTACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >2145A_2010_nsp4_VIPR_ALG4_701216631_11718_11984_1_2010_07_China_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >MDS11_nsp4_VIPR_ALG4_QBP84728_1_11698_11964_1_NA_NA_Unknown_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >OC43_human_USA_913_29_1991_nsp4_VIPR_ALG4_530802368_11699_11965_1_1991_03_14_USA_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >UNKNOWN_FJ425189_nsp4_VIPR_ALG4_215478151_11689_11955_1_1994_01_01_USA_Deer_Betacoronavirus_1 TCAAAATTGACTGATGTTAAATGTGCTAATGTTGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAACTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCTGATCTGGGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGACGATTACGCAAAGGACAATACTGTTTTGCAG >E_AH187_TC_nsp4_VIPR_ALG4_251748090_11703_11969_1_2000_01_01_USA_Cattle_Betacoronavirus_1 TCAAAATTGACTGATGTTAAATGTGCTAATGTTGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAACTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCTGATCTGGGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGACGATTACGCAAAGGACAATACTGTTTTGCAG >10290_2010_nsp4_VIPR_ALG4_701216883_11718_11984_1_2010_07_China_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >12694_2012_nsp4_VIPR_ALG4_701216743_11718_11984_1_2012_05_China_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >PHEV_CoV_swine_USA_15TOSU0582_2015_nsp4_VIPR_ALG4_ARC95217_1_11680_11946_1_2015_08_20_USA_Swine_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAACTCTAAGTTGTGGCATTATTGTAGTACTTTGCACAATGAAATACTTGCCACTTCGGATTTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >BJ_124_nsp4_VIPR_ALG4_AXX83300_1_11623_11889_1_2015_05_06_China_Unknown_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >PHEV_CoV_swine_USA_15TOSU1785_2015_nsp4_VIPR_ALG4_ARC95225_1_11680_11946_1_2015_08_15_USA_Swine_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAACTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATTTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTTACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >R_AH65_TC_nsp4_VIPR_ALG4_145208921_11703_11969_1_NA_USA_Cattle_Betacoronavirus_1 TCAAAATTGACTGATGTTAAATGTGCTAATGTTGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAACTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCTGATCTGGGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGACGATTACGCAAAGGACAATACTGTTTTGCAG >OC43_human_USA_912_10_1991_nsp4_VIPR_ALG4_530802237_11712_11978_1_1991_02_07_USA_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >10574_2010_nsp4_VIPR_ALG4_701216890_11718_11984_1_2010_09_China_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTATTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >PHEV_CoV_swine_USA_15TOSU1209_2015_nsp4_VIPR_ALG4_ARC95233_1_11680_11946_1_2015_07_25_USA_Swine_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAACTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATTTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTTACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >TCG_26_nsp4_VIPR_ALG4_BBM61504_1_11692_11958_1_2017_12_Japan_Unknown_Betacoronavirus_1 TCAAAATTGACTGATGTTAAATGTGCTAATGTTGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCTGATCTGGGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGACGATTACGCAAAGGACAATACTGTTTTGCAG >TCG_25_nsp4_VIPR_ALG4_BBM61494_1_11690_11956_1_2017_12_Japan_Unknown_Betacoronavirus_1 TCAAAATTGACTGATGTTAAATGTGCTAATGTTGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCTGATCTGGGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGACGATTACGCAAAGGACAATACTGTTTTGCAG >4_17_03_nsp4_VIPR_ALG4_AVZ61096_1_11719_11985_1_2017_04_USA_Cattle_Betacoronavirus_1 TCAAAATTGACTGATGTTAAATGTGCTAATGTTGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCTGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGACGACTACGCAAAGGACAATACTGTTTTGCAG >TCG_8_nsp4_VIPR_ALG4_BBM61394_1_11692_11958_1_2008_01_Japan_Unknown_Betacoronavirus_1 TCAAAATTGACTGATGTTAAATGTGCTAATGTTGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCTGATCTGGGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGACGATTACGTAAAGGACAATACTGTTTTGCAG >TCG_9_nsp4_VIPR_ALG4_BBM61424_1_11680_11946_1_2008_03_Japan_Unknown_Betacoronavirus_1 TCAAAATTGACTGATGTTAAATGTGCTAATGTTGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCTGATCTGGGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGACGATTACGCAAAGGACAATACTGTTTTGCAG >TNP_12636_nsp4_VIPR_ALG4_AWW13571_1_11712_11978_1_2016_12_10_Cote_dIvoire_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >TCG_29_nsp4_VIPR_ALG4_BBM61534_1_11692_11958_1_2017_12_Japan_Unknown_Betacoronavirus_1 TCAAAATTGACTGATGTTAAATGTGCTAATGTTGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCTGATCTGGGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGACGATTACGCAAAGGACAATACTGTTTTGCAG >892A_2008_nsp4_VIPR_ALG4_701216876_11718_11984_1_2008_10_China_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >5484_2007_nsp4_VIPR_ALG4_701216799_11718_11984_1_2007_06_China_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >HCoV_OC43_Seattle_USA_SC2476_2015_nsp4_VIPR_ALG4_ARK08667_1_11680_11946_1_2015_USA_Human_Betacoronavirus_1 TCAAAATTGACTGATGTCAAATGTGCTAATGTCGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCATTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCGGATCTGAGTGTTGCTTTTGAAAAGCTTGCTCAGTTATTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGATGATTACGCAAAGGACAATACTGTTTTGCAG >7_16_23_nsp4_VIPR_ALG4_AVZ61126_1_11719_11985_1_2016_07_USA_Cattle_Betacoronavirus_1 TCAAAATTGACTGATGTTAAATGTGCTAATGTTGTCTTGCTTAATTGCTTGCAACATTTGCATGTTGCTTCTAATTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCTGATCTGGGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAACCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGACGATTACGCAAAGGACAATACTGTTTTGCAG >DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1 TCAAAATTGACTGATGTTAAATGTGCTAATGTTGTCTTGCTTAATTGCTTGCAACACTTGCATGTTGCTTCTAATTCTAAGTTGTGGCAGTATTGTAGCACTTTGCACAATGAAATACTTGCCACTTCTGATCTGGGTGTTGCTTTTGAAAAGCTTGCTCAGTTGTTAATTGTTTTGTTTGCTAATCCAGCTGCTGTGGATAGCAAGTGCCTGACTAGTATTGAAGAAGTTTGCGACGATTACGCAAAGGACAATACTGTTTTGCAG
>MY_U710_12_nsp4_VIPR_ALG4_AQN78701_1_11718_11984_1_2012_06_20_Malaysia_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >OC43_human_USA_901_54_1990_nsp4_VIPR_ALG4_530802467_11699_11965_1_1990_01_23_USA_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLASIEEVCDDYAKDNTVLQ >OC43_human_USA_901_41_1990_nsp4_VIPR_ALG4_530802215_11699_11965_1_1990_01_17_USA_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >PHEV_CoV_swine_USA_15TOSU1655_2015_nsp4_VIPR_ALG4_ARC95241_1_11720_11986_1_2015_08_01_USA_Swine_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >2145A_2010_nsp4_VIPR_ALG4_701216631_11718_11984_1_2010_07_China_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >MDS11_nsp4_VIPR_ALG4_QBP84728_1_11698_11964_1_NA_NA_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >OC43_human_USA_913_29_1991_nsp4_VIPR_ALG4_530802368_11699_11965_1_1991_03_14_USA_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >UNKNOWN_FJ425189_nsp4_VIPR_ALG4_215478151_11689_11955_1_1994_01_01_USA_Deer_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >E_AH187_TC_nsp4_VIPR_ALG4_251748090_11703_11969_1_2000_01_01_USA_Cattle_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >10290_2010_nsp4_VIPR_ALG4_701216883_11718_11984_1_2010_07_China_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >12694_2012_nsp4_VIPR_ALG4_701216743_11718_11984_1_2012_05_China_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >PHEV_CoV_swine_USA_15TOSU0582_2015_nsp4_VIPR_ALG4_ARC95217_1_11680_11946_1_2015_08_20_USA_Swine_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >BJ_124_nsp4_VIPR_ALG4_AXX83300_1_11623_11889_1_2015_05_06_China_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >PHEV_CoV_swine_USA_15TOSU1785_2015_nsp4_VIPR_ALG4_ARC95225_1_11680_11946_1_2015_08_15_USA_Swine_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >R_AH65_TC_nsp4_VIPR_ALG4_145208921_11703_11969_1_NA_USA_Cattle_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >OC43_human_USA_912_10_1991_nsp4_VIPR_ALG4_530802237_11712_11978_1_1991_02_07_USA_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >10574_2010_nsp4_VIPR_ALG4_701216890_11718_11984_1_2010_09_China_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIILFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >PHEV_CoV_swine_USA_15TOSU1209_2015_nsp4_VIPR_ALG4_ARC95233_1_11680_11946_1_2015_07_25_USA_Swine_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >TCG_26_nsp4_VIPR_ALG4_BBM61504_1_11692_11958_1_2017_12_Japan_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >TCG_25_nsp4_VIPR_ALG4_BBM61494_1_11690_11956_1_2017_12_Japan_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >4_17_03_nsp4_VIPR_ALG4_AVZ61096_1_11719_11985_1_2017_04_USA_Cattle_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >TCG_8_nsp4_VIPR_ALG4_BBM61394_1_11692_11958_1_2008_01_Japan_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYVKDNTVLQ >TCG_9_nsp4_VIPR_ALG4_BBM61424_1_11680_11946_1_2008_03_Japan_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >TNP_12636_nsp4_VIPR_ALG4_AWW13571_1_11712_11978_1_2016_12_10_Cote_dIvoire_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >TCG_29_nsp4_VIPR_ALG4_BBM61534_1_11692_11958_1_2017_12_Japan_Unknown_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >892A_2008_nsp4_VIPR_ALG4_701216876_11718_11984_1_2008_10_China_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >5484_2007_nsp4_VIPR_ALG4_701216799_11718_11984_1_2007_06_China_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >HCoV_OC43_Seattle_USA_SC2476_2015_nsp4_VIPR_ALG4_ARK08667_1_11680_11946_1_2015_USA_Human_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWHYCSTLHNEILATSDLSVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >7_16_23_nsp4_VIPR_ALG4_AVZ61126_1_11719_11985_1_2016_07_USA_Cattle_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ >DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1 SKLTDVKCANVVLLNCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLFANPAAVDSKCLTSIEEVCDDYAKDNTVLQ
Reading sequence file /data//pss_subsets/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result/original_alignment/codeml/fasta/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result.1
Found 30 sequences of length 267
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 1.8%
Found 10 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0%100.0%
Using a window size of 80 with k as 3
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 12 polymorphic sites
**p-Value(s)**
----------
NSS: 9.68e-01 (1000 permutations)
Max Chi^2: 5.13e-01 (1000 permutations)
PHI (Permutation): 8.36e-01 (1000 permutations)
PHI (Normal): 7.24e-01
#NEXUS
[ID: 8934325802]
begin taxa;
dimensions ntax=30;
taxlabels
PHEV_CoV_swine_USA_15TOSU0582_2015_nsp4_VIPR_ALG4_ARC95217_1_11680_11946_1_2015_08_20_USA_Swine_Betacoronavirus_1
12694_2012_nsp4_VIPR_ALG4_701216743_11718_11984_1_2012_05_China_Human_Betacoronavirus_1
BJ_124_nsp4_VIPR_ALG4_AXX83300_1_11623_11889_1_2015_05_06_China_Unknown_Betacoronavirus_1
10574_2010_nsp4_VIPR_ALG4_701216890_11718_11984_1_2010_09_China_Human_Betacoronavirus_1
OC43_human_USA_912_10_1991_nsp4_VIPR_ALG4_530802237_11712_11978_1_1991_02_07_USA_Human_Betacoronavirus_1
PHEV_CoV_swine_USA_15TOSU1209_2015_nsp4_VIPR_ALG4_ARC95233_1_11680_11946_1_2015_07_25_USA_Swine_Betacoronavirus_1
TCG_8_nsp4_VIPR_ALG4_BBM61394_1_11692_11958_1_2008_01_Japan_Unknown_Betacoronavirus_1
4_17_03_nsp4_VIPR_ALG4_AVZ61096_1_11719_11985_1_2017_04_USA_Cattle_Betacoronavirus_1
5484_2007_nsp4_VIPR_ALG4_701216799_11718_11984_1_2007_06_China_Human_Betacoronavirus_1
892A_2008_nsp4_VIPR_ALG4_701216876_11718_11984_1_2008_10_China_Human_Betacoronavirus_1
PHEV_CoV_swine_USA_15TOSU1655_2015_nsp4_VIPR_ALG4_ARC95241_1_11720_11986_1_2015_08_01_USA_Swine_Betacoronavirus_1
DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1
UNKNOWN_FJ425189_nsp4_VIPR_ALG4_215478151_11689_11955_1_1994_01_01_USA_Deer_Betacoronavirus_1
MY_U710_12_nsp4_VIPR_ALG4_AQN78701_1_11718_11984_1_2012_06_20_Malaysia_Human_Betacoronavirus_1
OC43_human_USA_901_41_1990_nsp4_VIPR_ALG4_530802215_11699_11965_1_1990_01_17_USA_Human_Betacoronavirus_1
OC43_human_USA_901_54_1990_nsp4_VIPR_ALG4_530802467_11699_11965_1_1990_01_23_USA_Human_Betacoronavirus_1
MDS11_nsp4_VIPR_ALG4_QBP84728_1_11698_11964_1_NA_NA_Unknown_Betacoronavirus_1
2145A_2010_nsp4_VIPR_ALG4_701216631_11718_11984_1_2010_07_China_Human_Betacoronavirus_1
OC43_human_USA_913_29_1991_nsp4_VIPR_ALG4_530802368_11699_11965_1_1991_03_14_USA_Human_Betacoronavirus_1
10290_2010_nsp4_VIPR_ALG4_701216883_11718_11984_1_2010_07_China_Human_Betacoronavirus_1
PHEV_CoV_swine_USA_15TOSU1785_2015_nsp4_VIPR_ALG4_ARC95225_1_11680_11946_1_2015_08_15_USA_Swine_Betacoronavirus_1
R_AH65_TC_nsp4_VIPR_ALG4_145208921_11703_11969_1_NA_USA_Cattle_Betacoronavirus_1
TCG_25_nsp4_VIPR_ALG4_BBM61494_1_11690_11956_1_2017_12_Japan_Unknown_Betacoronavirus_1
TCG_26_nsp4_VIPR_ALG4_BBM61504_1_11692_11958_1_2017_12_Japan_Unknown_Betacoronavirus_1
TCG_29_nsp4_VIPR_ALG4_BBM61534_1_11692_11958_1_2017_12_Japan_Unknown_Betacoronavirus_1
TCG_9_nsp4_VIPR_ALG4_BBM61424_1_11680_11946_1_2008_03_Japan_Unknown_Betacoronavirus_1
TNP_12636_nsp4_VIPR_ALG4_AWW13571_1_11712_11978_1_2016_12_10_Cote_dIvoire_Human_Betacoronavirus_1
E_AH187_TC_nsp4_VIPR_ALG4_251748090_11703_11969_1_2000_01_01_USA_Cattle_Betacoronavirus_1
7_16_23_nsp4_VIPR_ALG4_AVZ61126_1_11719_11985_1_2016_07_USA_Cattle_Betacoronavirus_1
HCoV_OC43_Seattle_USA_SC2476_2015_nsp4_VIPR_ALG4_ARK08667_1_11680_11946_1_2015_USA_Human_Betacoronavirus_1
;
end;
begin trees;
translate
1 PHEV_CoV_swine_USA_15TOSU0582_2015_nsp4_VIPR_ALG4_ARC95217_1_11680_11946_1_2015_08_20_USA_Swine_Betacoronavirus_1,
2 12694_2012_nsp4_VIPR_ALG4_701216743_11718_11984_1_2012_05_China_Human_Betacoronavirus_1,
3 BJ_124_nsp4_VIPR_ALG4_AXX83300_1_11623_11889_1_2015_05_06_China_Unknown_Betacoronavirus_1,
4 10574_2010_nsp4_VIPR_ALG4_701216890_11718_11984_1_2010_09_China_Human_Betacoronavirus_1,
5 OC43_human_USA_912_10_1991_nsp4_VIPR_ALG4_530802237_11712_11978_1_1991_02_07_USA_Human_Betacoronavirus_1,
6 PHEV_CoV_swine_USA_15TOSU1209_2015_nsp4_VIPR_ALG4_ARC95233_1_11680_11946_1_2015_07_25_USA_Swine_Betacoronavirus_1,
7 TCG_8_nsp4_VIPR_ALG4_BBM61394_1_11692_11958_1_2008_01_Japan_Unknown_Betacoronavirus_1,
8 4_17_03_nsp4_VIPR_ALG4_AVZ61096_1_11719_11985_1_2017_04_USA_Cattle_Betacoronavirus_1,
9 5484_2007_nsp4_VIPR_ALG4_701216799_11718_11984_1_2007_06_China_Human_Betacoronavirus_1,
10 892A_2008_nsp4_VIPR_ALG4_701216876_11718_11984_1_2008_10_China_Human_Betacoronavirus_1,
11 PHEV_CoV_swine_USA_15TOSU1655_2015_nsp4_VIPR_ALG4_ARC95241_1_11720_11986_1_2015_08_01_USA_Swine_Betacoronavirus_1,
12 DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1,
13 UNKNOWN_FJ425189_nsp4_VIPR_ALG4_215478151_11689_11955_1_1994_01_01_USA_Deer_Betacoronavirus_1,
14 MY_U710_12_nsp4_VIPR_ALG4_AQN78701_1_11718_11984_1_2012_06_20_Malaysia_Human_Betacoronavirus_1,
15 OC43_human_USA_901_41_1990_nsp4_VIPR_ALG4_530802215_11699_11965_1_1990_01_17_USA_Human_Betacoronavirus_1,
16 OC43_human_USA_901_54_1990_nsp4_VIPR_ALG4_530802467_11699_11965_1_1990_01_23_USA_Human_Betacoronavirus_1,
17 MDS11_nsp4_VIPR_ALG4_QBP84728_1_11698_11964_1_NA_NA_Unknown_Betacoronavirus_1,
18 2145A_2010_nsp4_VIPR_ALG4_701216631_11718_11984_1_2010_07_China_Human_Betacoronavirus_1,
19 OC43_human_USA_913_29_1991_nsp4_VIPR_ALG4_530802368_11699_11965_1_1991_03_14_USA_Human_Betacoronavirus_1,
20 10290_2010_nsp4_VIPR_ALG4_701216883_11718_11984_1_2010_07_China_Human_Betacoronavirus_1,
21 PHEV_CoV_swine_USA_15TOSU1785_2015_nsp4_VIPR_ALG4_ARC95225_1_11680_11946_1_2015_08_15_USA_Swine_Betacoronavirus_1,
22 R_AH65_TC_nsp4_VIPR_ALG4_145208921_11703_11969_1_NA_USA_Cattle_Betacoronavirus_1,
23 TCG_25_nsp4_VIPR_ALG4_BBM61494_1_11690_11956_1_2017_12_Japan_Unknown_Betacoronavirus_1,
24 TCG_26_nsp4_VIPR_ALG4_BBM61504_1_11692_11958_1_2017_12_Japan_Unknown_Betacoronavirus_1,
25 TCG_29_nsp4_VIPR_ALG4_BBM61534_1_11692_11958_1_2017_12_Japan_Unknown_Betacoronavirus_1,
26 TCG_9_nsp4_VIPR_ALG4_BBM61424_1_11680_11946_1_2008_03_Japan_Unknown_Betacoronavirus_1,
27 TNP_12636_nsp4_VIPR_ALG4_AWW13571_1_11712_11978_1_2016_12_10_Cote_dIvoire_Human_Betacoronavirus_1,
28 E_AH187_TC_nsp4_VIPR_ALG4_251748090_11703_11969_1_2000_01_01_USA_Cattle_Betacoronavirus_1,
29 7_16_23_nsp4_VIPR_ALG4_AVZ61126_1_11719_11985_1_2016_07_USA_Cattle_Betacoronavirus_1,
30 HCoV_OC43_Seattle_USA_SC2476_2015_nsp4_VIPR_ALG4_ARK08667_1_11680_11946_1_2015_USA_Human_Betacoronavirus_1
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:2.589264e-03,(6:7.618398e-04,11:7.437277e-04,21:7.632211e-04)0.979:2.384336e-03,(((2:8.225464e-04,3:8.198744e-04,4:1.892030e-03,5:7.874382e-04,9:7.778540e-04,10:7.647305e-04,14:7.999925e-04,16:1.871028e-03,17:8.160120e-04,18:7.784525e-04,19:7.774539e-04,20:7.973576e-04,27:7.657009e-04,30:7.563287e-04)0.539:1.851309e-03,15:2.257133e-03)0.755:2.371190e-03,((7:1.921540e-03,12:1.928995e-03,(13:7.747022e-04,22:8.021932e-04,28:7.458163e-04)0.755:1.831688e-03,23:8.430877e-04,24:7.669313e-04,25:8.321281e-04,26:8.027870e-04,29:1.884251e-03)0.602:1.952841e-03,8:2.369895e-03)1.000:6.375017e-03)0.838:3.127339e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:2.589264e-03,(6:7.618398e-04,11:7.437277e-04,21:7.632211e-04):2.384336e-03,(((2:8.225464e-04,3:8.198744e-04,4:1.892030e-03,5:7.874382e-04,9:7.778540e-04,10:7.647305e-04,14:7.999925e-04,16:1.871028e-03,17:8.160120e-04,18:7.784525e-04,19:7.774539e-04,20:7.973576e-04,27:7.657009e-04,30:7.563287e-04):1.851309e-03,15:2.257133e-03):2.371190e-03,((7:1.921540e-03,12:1.928995e-03,(13:7.747022e-04,22:8.021932e-04,28:7.458163e-04):1.831688e-03,23:8.430877e-04,24:7.669313e-04,25:8.321281e-04,26:8.027870e-04,29:1.884251e-03):1.952841e-03,8:2.369895e-03):6.375017e-03):3.127339e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -508.35 -531.69
2 -508.08 -525.92
--------------------------------------
TOTAL -508.20 -531.00
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.092590 0.000687 0.047170 0.144311 0.088900 957.53 1097.06 1.000
r(A<->C){all} 0.045888 0.001760 0.000034 0.131895 0.034063 227.99 277.12 1.003
r(A<->G){all} 0.229276 0.008145 0.079351 0.417785 0.222075 144.23 162.31 1.020
r(A<->T){all} 0.025033 0.000535 0.000001 0.072533 0.018439 330.80 345.05 1.002
r(C<->G){all} 0.052183 0.002486 0.000057 0.154903 0.037670 119.42 157.28 1.000
r(C<->T){all} 0.496660 0.010543 0.303939 0.698713 0.496124 157.98 203.58 1.016
r(G<->T){all} 0.150960 0.004221 0.035035 0.271394 0.141802 153.18 239.17 1.000
pi(A){all} 0.249317 0.000675 0.199352 0.300352 0.248996 970.40 1032.22 1.000
pi(C){all} 0.169709 0.000496 0.124062 0.211144 0.168874 995.31 1015.44 1.000
pi(G){all} 0.214737 0.000603 0.165392 0.260688 0.214759 814.99 966.88 1.000
pi(T){all} 0.366237 0.000833 0.308105 0.420555 0.365867 841.46 943.00 1.000
alpha{1,2} 0.696756 0.699799 0.000909 2.381770 0.381485 587.18 701.98 1.000
alpha{3} 1.305145 1.157877 0.000146 3.363833 1.022485 705.12 861.01 1.000
pinvar{all} 0.433981 0.047284 0.009650 0.765273 0.452479 362.63 367.44 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/DcCoV_HKU23_camel_Morocco_CAC2586_2016_nsp4_VIPR_ALG4_QEY10630_1_11709_11975_1_2016_03_05_Morocco_Camel_Betacoronavirus_1.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 30 ls = 89
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 2 2 2 2 2 2 | Ser TCT 2 2 2 2 2 2 | Tyr TAT 1 1 1 1 1 1 | Cys TGT 2 2 2 2 2 2
TTC 0 0 0 0 0 0 | TCC 0 0 0 0 0 0 | TAC 1 1 1 1 1 1 | TGC 3 3 3 3 3 3
Leu TTA 2 2 2 1 2 2 | TCA 1 1 1 1 1 1 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 8 8 8 10 8 8 | TCG 1 1 1 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 3 3 4 3 3 | Pro CCT 0 0 0 0 0 0 | His CAT 3 3 2 2 3 3 | Arg CGT 0 0 0 0 0 0
CTC 0 0 0 0 0 0 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 1 | CGC 0 0 0 0 0 0
CTA 0 0 0 0 0 0 | CCA 1 1 1 1 1 1 | Gln CAA 1 1 1 1 1 1 | CGA 0 0 0 0 0 0
CTG 2 2 2 0 2 2 | CCG 0 0 0 0 0 0 | CAG 2 2 3 3 2 2 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 2 2 2 2 | Thr ACT 5 4 5 5 5 5 | Asn AAT 6 6 5 5 6 6 | Ser AGT 2 2 2 2 2 2
ATC 0 0 0 0 0 0 | ACC 0 0 0 0 0 0 | AAC 0 0 1 1 0 0 | AGC 2 2 2 2 2 2
ATA 1 1 1 1 1 1 | ACA 0 0 0 0 0 0 | Lys AAA 2 2 2 2 2 2 | Arg AGA 0 0 0 0 0 0
Met ATG 0 0 0 0 0 0 | ACG 0 0 0 0 0 0 | AAG 4 4 4 4 4 4 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 5 5 5 5 5 5 | Ala GCT 7 8 7 7 7 7 | Asp GAT 5 5 5 5 5 5 | Gly GGT 0 0 0 0 0 0
GTC 3 3 3 3 3 3 | GCC 1 1 1 1 1 1 | GAC 1 1 1 1 1 1 | GGC 0 0 0 0 0 0
GTA 0 0 0 0 0 0 | GCA 1 1 1 1 1 1 | Glu GAA 4 4 4 4 4 4 | GGA 0 0 0 0 0 0
GTG 1 1 1 1 1 1 | GCG 0 0 0 0 0 0 | GAG 0 0 0 0 0 0 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 2 2 2 2 2 2 | Ser TCT 2 3 3 2 2 2 | Tyr TAT 1 1 1 1 1 1 | Cys TGT 2 2 2 2 2 2
TTC 0 0 0 0 0 0 | TCC 0 0 0 0 0 0 | TAC 1 1 1 1 1 1 | TGC 3 3 3 3 3 3
Leu TTA 2 1 1 2 2 1 | TCA 1 1 1 1 1 1 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 8 9 9 8 8 10 | TCG 1 0 0 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 3 3 3 3 3 | Pro CCT 0 0 0 0 0 0 | His CAT 3 2 2 3 3 3 | Arg CGT 0 0 0 0 0 0
CTC 0 0 0 0 0 0 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 1 | CGC 0 0 0 0 0 0
CTA 0 0 0 0 0 0 | CCA 1 1 1 1 1 1 | Gln CAA 1 1 1 1 1 1 | CGA 0 0 0 0 0 0
CTG 2 2 2 2 2 1 | CCG 0 0 0 0 0 0 | CAG 2 3 3 2 2 2 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 2 2 2 2 | Thr ACT 5 5 5 5 5 5 | Asn AAT 6 5 5 6 6 5 | Ser AGT 2 1 1 2 2 3
ATC 0 0 0 0 0 0 | ACC 0 0 0 0 0 0 | AAC 0 1 1 0 0 1 | AGC 2 2 2 2 2 1
ATA 1 1 1 1 1 1 | ACA 0 0 0 0 0 0 | Lys AAA 2 2 2 2 2 2 | Arg AGA 0 0 0 0 0 0
Met ATG 0 0 0 0 0 0 | ACG 0 0 0 0 0 0 | AAG 4 4 4 4 4 4 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 5 7 7 5 5 5 | Ala GCT 7 7 7 7 7 7 | Asp GAT 5 4 4 5 5 5 | Gly GGT 0 1 1 0 0 0
GTC 3 1 1 3 3 3 | GCC 1 1 1 1 1 1 | GAC 1 2 2 1 1 1 | GGC 0 0 0 0 0 0
GTA 0 0 0 0 0 0 | GCA 1 1 1 1 1 1 | Glu GAA 4 4 4 4 4 4 | GGA 0 0 0 0 0 0
GTG 1 1 1 1 1 1 | GCG 0 0 0 0 0 0 | GAG 0 0 0 0 0 0 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 2 2 2 2 2 2 | Ser TCT 2 2 3 2 2 2 | Tyr TAT 1 1 1 1 1 1 | Cys TGT 2 2 2 2 2 2
TTC 0 0 0 0 0 0 | TCC 0 0 0 0 0 0 | TAC 1 1 1 1 1 1 | TGC 3 3 3 3 3 3
Leu TTA 2 1 1 2 2 1 | TCA 1 1 1 1 1 1 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 8 10 9 8 8 10 | TCG 1 1 0 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 4 3 3 3 4 | Pro CCT 0 0 0 0 0 0 | His CAT 3 2 2 3 3 2 | Arg CGT 0 0 0 0 0 0
CTC 0 0 0 0 0 0 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 1 | CGC 0 0 0 0 0 0
CTA 0 0 0 0 0 0 | CCA 1 1 1 1 1 1 | Gln CAA 1 1 1 1 1 1 | CGA 0 0 0 0 0 0
CTG 2 0 2 2 2 0 | CCG 0 0 0 0 0 0 | CAG 2 3 3 2 2 3 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 2 2 3 2 | Thr ACT 5 5 5 5 5 5 | Asn AAT 6 5 5 6 6 5 | Ser AGT 2 2 1 2 2 2
ATC 0 0 0 0 0 0 | ACC 0 0 0 0 0 0 | AAC 0 1 1 0 0 1 | AGC 2 2 2 2 2 2
ATA 1 1 1 1 1 1 | ACA 0 0 0 0 0 0 | Lys AAA 2 2 2 2 2 2 | Arg AGA 0 0 0 0 0 0
Met ATG 0 0 0 0 0 0 | ACG 0 0 0 0 0 0 | AAG 4 4 4 4 4 4 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 5 5 7 5 4 5 | Ala GCT 7 7 7 7 7 7 | Asp GAT 5 5 4 5 5 5 | Gly GGT 0 0 1 0 0 0
GTC 3 3 1 3 3 3 | GCC 1 1 1 1 1 1 | GAC 1 1 2 1 1 1 | GGC 0 0 0 0 0 0
GTA 0 0 0 0 0 0 | GCA 1 1 1 1 1 1 | Glu GAA 4 4 4 4 4 4 | GGA 0 0 0 0 0 0
GTG 1 1 1 1 1 1 | GCG 0 0 0 0 0 0 | GAG 0 0 0 0 0 0 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 2 2 2 2 2 2 | Ser TCT 3 3 3 3 3 2 | Tyr TAT 1 1 1 1 1 1 | Cys TGT 2 2 2 2 2 2
TTC 0 0 0 0 0 0 | TCC 0 0 0 0 0 0 | TAC 1 1 1 1 1 1 | TGC 3 3 3 3 3 3
Leu TTA 1 1 1 1 1 2 | TCA 1 1 1 1 1 1 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 9 9 9 9 9 8 | TCG 0 0 0 0 0 1 | TAG 0 0 0 0 0 0 | Trp TGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 3 3 3 3 3 | Pro CCT 0 0 0 0 0 0 | His CAT 2 2 2 2 2 3 | Arg CGT 0 0 0 0 0 0
CTC 0 0 0 0 0 0 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 1 | CGC 0 0 0 0 0 0
CTA 0 0 0 0 0 0 | CCA 1 1 1 1 1 1 | Gln CAA 1 1 1 1 1 1 | CGA 0 0 0 0 0 0
CTG 2 2 2 2 2 2 | CCG 0 0 0 0 0 0 | CAG 3 3 3 3 3 2 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 2 2 2 2 | Thr ACT 5 5 5 5 5 5 | Asn AAT 6 6 6 6 6 6 | Ser AGT 1 1 2 1 1 2
ATC 0 0 0 0 0 0 | ACC 0 0 0 0 0 0 | AAC 0 0 0 0 0 0 | AGC 2 2 2 2 2 2
ATA 1 1 1 1 1 1 | ACA 0 0 0 0 0 0 | Lys AAA 2 2 2 2 2 2 | Arg AGA 0 0 0 0 0 0
Met ATG 0 0 0 0 0 0 | ACG 0 0 0 0 0 0 | AAG 4 4 4 4 4 4 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 7 7 7 7 7 5 | Ala GCT 7 7 7 7 7 7 | Asp GAT 4 4 3 4 4 5 | Gly GGT 1 1 0 1 1 0
GTC 1 1 1 1 1 3 | GCC 1 1 1 1 1 1 | GAC 2 2 3 2 2 1 | GGC 0 0 0 0 0 0
GTA 0 0 0 1 0 0 | GCA 1 1 1 0 1 1 | Glu GAA 4 4 4 4 4 4 | GGA 0 0 0 0 0 0
GTG 1 1 1 1 1 1 | GCG 0 0 0 0 0 0 | GAG 0 0 0 0 0 0 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 2 2 2 2 2 2 | Ser TCT 3 2 2 2 3 3 | Tyr TAT 1 1 1 1 1 1 | Cys TGT 2 2 2 2 2 2
TTC 0 0 0 0 0 0 | TCC 0 0 0 0 0 0 | TAC 1 1 1 1 1 1 | TGC 3 3 3 3 3 3
Leu TTA 1 2 2 2 1 1 | TCA 1 1 1 1 1 1 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 9 8 8 8 9 9 | TCG 0 1 1 1 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 3 3 3 3 3 3 | Pro CCT 0 0 0 0 0 0 | His CAT 2 3 3 3 2 1 | Arg CGT 0 0 0 0 0 0
CTC 0 0 0 0 0 0 | CCC 0 0 0 0 0 0 | CAC 1 1 1 1 1 2 | CGC 0 0 0 0 0 0
CTA 0 0 0 0 0 0 | CCA 1 1 1 1 1 1 | Gln CAA 1 1 1 1 1 1 | CGA 0 0 0 0 0 0
CTG 2 2 2 2 2 2 | CCG 0 0 0 0 0 0 | CAG 3 2 2 2 3 3 | CGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 2 2 2 2 2 2 | Thr ACT 5 5 5 5 5 5 | Asn AAT 6 6 6 6 5 6 | Ser AGT 1 2 2 2 1 1
ATC 0 0 0 0 0 0 | ACC 0 0 0 0 0 0 | AAC 0 0 0 0 1 0 | AGC 2 2 2 2 2 2
ATA 1 1 1 1 1 1 | ACA 0 0 0 0 0 0 | Lys AAA 2 2 2 2 2 2 | Arg AGA 0 0 0 0 0 0
Met ATG 0 0 0 0 0 0 | ACG 0 0 0 0 0 0 | AAG 4 4 4 4 4 4 | AGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 7 5 5 5 7 7 | Ala GCT 7 7 7 7 7 7 | Asp GAT 4 5 5 5 4 4 | Gly GGT 1 0 0 0 1 1
GTC 1 3 3 3 1 1 | GCC 1 1 1 1 1 1 | GAC 2 1 1 1 2 2 | GGC 0 0 0 0 0 0
GTA 0 0 0 0 0 0 | GCA 1 1 1 1 1 1 | Glu GAA 4 4 4 4 4 4 | GGA 0 0 0 0 0 0
GTG 1 1 1 1 1 1 | GCG 0 0 0 0 0 0 | GAG 0 0 0 0 0 0 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C154
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25468 G:0.21348
#2: C182
position 1: T:0.26966 C:0.14607 A:0.25843 G:0.32584
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25094 G:0.21723
#3: C179
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.48315 C:0.14607 A:0.14607 G:0.22472
Average T:0.35955 C:0.16854 A:0.25468 G:0.21723
#4: C215
position 1: T:0.28090 C:0.13483 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.49438 C:0.14607 A:0.13483 G:0.22472
Average T:0.36704 C:0.16479 A:0.25094 G:0.21723
#5: C16
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25468 G:0.21348
#6: C136
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25468 G:0.21348
#7: C192
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25468 G:0.21348
#8: C278
position 1: T:0.26966 C:0.14607 A:0.25843 G:0.32584
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.13483 G:0.22472
Average T:0.36704 C:0.16479 A:0.24719 G:0.22097
#9: C73
position 1: T:0.26966 C:0.14607 A:0.25843 G:0.32584
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.13483 G:0.22472
Average T:0.36704 C:0.16479 A:0.24719 G:0.22097
#10: C3
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25468 G:0.21348
#11: C5
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25468 G:0.21348
#12: C212
position 1: T:0.28090 C:0.13483 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.13483 G:0.22472
Average T:0.37079 C:0.16105 A:0.25094 G:0.21723
#13: C59
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25468 G:0.21348
#14: C220
position 1: T:0.28090 C:0.13483 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.49438 C:0.14607 A:0.13483 G:0.22472
Average T:0.36704 C:0.16479 A:0.25094 G:0.21723
#15: C223
position 1: T:0.26966 C:0.14607 A:0.25843 G:0.32584
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.13483 G:0.22472
Average T:0.36704 C:0.16479 A:0.24719 G:0.22097
#16: C187
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25468 G:0.21348
#17: C4
position 1: T:0.26966 C:0.14607 A:0.28090 G:0.30337
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25843 G:0.20974
#18: C213
position 1: T:0.28090 C:0.13483 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.49438 C:0.14607 A:0.13483 G:0.22472
Average T:0.36704 C:0.16479 A:0.25094 G:0.21723
#19: C248
position 1: T:0.26966 C:0.14607 A:0.25843 G:0.32584
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.51685 C:0.12360 A:0.13483 G:0.22472
Average T:0.37079 C:0.16105 A:0.24719 G:0.22097
#20: C247
position 1: T:0.26966 C:0.14607 A:0.25843 G:0.32584
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.51685 C:0.12360 A:0.13483 G:0.22472
Average T:0.37079 C:0.16105 A:0.24719 G:0.22097
#21: C27
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.13483 G:0.22472
Average T:0.36704 C:0.16479 A:0.25094 G:0.21723
#22: C262
position 1: T:0.26966 C:0.14607 A:0.25843 G:0.32584
position 2: T:0.33708 C:0.20225 A:0.34831 G:0.11236
position 3: T:0.51685 C:0.12360 A:0.13483 G:0.22472
Average T:0.37453 C:0.15730 A:0.24719 G:0.22097
#23: C261
position 1: T:0.26966 C:0.14607 A:0.25843 G:0.32584
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.51685 C:0.12360 A:0.13483 G:0.22472
Average T:0.37079 C:0.16105 A:0.24719 G:0.22097
#24: C263
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25468 G:0.21348
#25: C251
position 1: T:0.26966 C:0.14607 A:0.25843 G:0.32584
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.51685 C:0.12360 A:0.13483 G:0.22472
Average T:0.37079 C:0.16105 A:0.24719 G:0.22097
#26: C51
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25468 G:0.21348
#27: C39
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25468 G:0.21348
#28: C84
position 1: T:0.26966 C:0.14607 A:0.26966 G:0.31461
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.14607 G:0.21348
Average T:0.36704 C:0.16479 A:0.25468 G:0.21348
#29: C48
position 1: T:0.26966 C:0.14607 A:0.25843 G:0.32584
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.13483 G:0.22472
Average T:0.36704 C:0.16479 A:0.24719 G:0.22097
#30: C67
position 1: T:0.26966 C:0.14607 A:0.25843 G:0.32584
position 2: T:0.32584 C:0.21348 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13483 A:0.13483 G:0.22472
Average T:0.36704 C:0.16479 A:0.24719 G:0.22097
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 60 | Ser S TCT 71 | Tyr Y TAT 30 | Cys C TGT 60
TTC 0 | TCC 0 | TAC 30 | TGC 90
Leu L TTA 45 | TCA 30 | *** * TAA 0 | *** * TGA 0
TTG 259 | TCG 19 | TAG 0 | Trp W TGG 30
------------------------------------------------------------------------------
Leu L CTT 93 | Pro P CCT 0 | His H CAT 74 | Arg R CGT 0
CTC 0 | CCC 0 | CAC 31 | CGC 0
CTA 0 | CCA 30 | Gln Q CAA 30 | CGA 0
CTG 53 | CCG 0 | CAG 75 | CGG 0
------------------------------------------------------------------------------
Ile I ATT 61 | Thr T ACT 149 | Asn N AAT 171 | Ser S AGT 51
ATC 0 | ACC 0 | AAC 9 | AGC 59
ATA 30 | ACA 0 | Lys K AAA 60 | Arg R AGA 0
Met M ATG 0 | ACG 0 | AAG 120 | AGG 0
------------------------------------------------------------------------------
Val V GTT 171 | Ala A GCT 211 | Asp D GAT 138 | Gly G GGT 10
GTC 68 | GCC 30 | GAC 42 | GGC 0
GTA 1 | GCA 29 | Glu E GAA 120 | GGA 0
GTG 30 | GCG 0 | GAG 0 | GGG 0
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.27116 C:0.14457 A:0.26592 G:0.31835
position 2: T:0.32622 C:0.21311 A:0.34831 G:0.11236
position 3: T:0.50562 C:0.13446 A:0.14045 G:0.21948
Average T:0.36767 C:0.16404 A:0.25156 G:0.21673
Model 1: NearlyNeutral (2 categories)
TREE # 1: (12, (18, 4, 14), (((11, 13, 17, 16, 27, 26, 1, 2, 6, 5, 7, 10, 24, 28), 3), ((22, 30, (8, 15, 9), 20, 19, 25, 23, 29), 21))); MP score: 20
lnL(ntime: 37 np: 40): -467.358663 +0.000000
31..12 31..32 32..18 32..4 32..14 31..33 33..34 34..35 35..11 35..13 35..17 35..16 35..27 35..26 35..1 35..2 35..6 35..5 35..7 35..10 35..24 35..28 34..3 33..36 36..37 37..22 37..30 37..38 38..8 38..15 38..9 37..20 37..19 37..25 37..23 37..29 36..21
0.023240 0.011792 0.000004 0.000004 0.000004 0.023814 0.011858 0.011853 0.000004 0.000004 0.011327 0.000004 0.000004 0.000004 0.000004 0.011302 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.011363 0.051112 0.013156 0.011726 0.011722 0.011682 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.011681 0.010637 4.729005 0.918207 0.037993
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.238355
(12: 0.023240, (18: 0.000004, 4: 0.000004, 14: 0.000004): 0.011792, (((11: 0.000004, 13: 0.000004, 17: 0.011327, 16: 0.000004, 27: 0.000004, 26: 0.000004, 1: 0.000004, 2: 0.011302, 6: 0.000004, 5: 0.000004, 7: 0.000004, 10: 0.000004, 24: 0.000004, 28: 0.000004): 0.011853, 3: 0.011363): 0.011858, ((22: 0.011726, 30: 0.011722, (8: 0.000004, 15: 0.000004, 9: 0.000004): 0.011682, 20: 0.000004, 19: 0.000004, 25: 0.000004, 23: 0.000004, 29: 0.011681): 0.013156, 21: 0.010637): 0.051112): 0.023814);
(C212: 0.023240, (C213: 0.000004, C215: 0.000004, C220: 0.000004): 0.011792, (((C5: 0.000004, C59: 0.000004, C4: 0.011327, C187: 0.000004, C39: 0.000004, C51: 0.000004, C154: 0.000004, C182: 0.011302, C136: 0.000004, C16: 0.000004, C192: 0.000004, C3: 0.000004, C263: 0.000004, C84: 0.000004): 0.011853, C179: 0.011363): 0.011858, ((C262: 0.011726, C67: 0.011722, (C278: 0.000004, C223: 0.000004, C73: 0.000004): 0.011682, C247: 0.000004, C248: 0.000004, C251: 0.000004, C261: 0.000004, C48: 0.011681): 0.013156, C27: 0.010637): 0.051112): 0.023814);
Detailed output identifying parameters
kappa (ts/tv) = 4.72900
MLEs of dN/dS (w) for site classes (K=2)
p: 0.91821 0.08179
w: 0.03799 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.023 210.5 56.5 0.1167 0.0030 0.0255 0.6 1.4
31..32 0.012 210.5 56.5 0.1167 0.0015 0.0130 0.3 0.7
32..18 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
32..4 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
32..14 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
31..33 0.024 210.5 56.5 0.1167 0.0031 0.0262 0.6 1.5
33..34 0.012 210.5 56.5 0.1167 0.0015 0.0130 0.3 0.7
34..35 0.012 210.5 56.5 0.1167 0.0015 0.0130 0.3 0.7
35..11 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
35..13 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
35..17 0.011 210.5 56.5 0.1167 0.0015 0.0124 0.3 0.7
35..16 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
35..27 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
35..26 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
35..1 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
35..2 0.011 210.5 56.5 0.1167 0.0014 0.0124 0.3 0.7
35..6 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
35..5 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
35..7 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
35..10 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
35..24 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
35..28 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
34..3 0.011 210.5 56.5 0.1167 0.0015 0.0125 0.3 0.7
33..36 0.051 210.5 56.5 0.1167 0.0065 0.0561 1.4 3.2
36..37 0.013 210.5 56.5 0.1167 0.0017 0.0144 0.4 0.8
37..22 0.012 210.5 56.5 0.1167 0.0015 0.0129 0.3 0.7
37..30 0.012 210.5 56.5 0.1167 0.0015 0.0129 0.3 0.7
37..38 0.012 210.5 56.5 0.1167 0.0015 0.0128 0.3 0.7
38..8 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
38..15 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
38..9 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
37..20 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
37..19 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
37..25 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
37..23 0.000 210.5 56.5 0.1167 0.0000 0.0000 0.0 0.0
37..29 0.012 210.5 56.5 0.1167 0.0015 0.0128 0.3 0.7
36..21 0.011 210.5 56.5 0.1167 0.0014 0.0117 0.3 0.7
Time used: 1:09
Model 2: PositiveSelection (3 categories)
TREE # 1: (12, (18, 4, 14), (((11, 13, 17, 16, 27, 26, 1, 2, 6, 5, 7, 10, 24, 28), 3), ((22, 30, (8, 15, 9), 20, 19, 25, 23, 29), 21))); MP score: 20
lnL(ntime: 37 np: 42): -466.982371 +0.000000
31..12 31..32 32..18 32..4 32..14 31..33 33..34 34..35 35..11 35..13 35..17 35..16 35..27 35..26 35..1 35..2 35..6 35..5 35..7 35..10 35..24 35..28 34..3 33..36 36..37 37..22 37..30 37..38 38..8 38..15 38..9 37..20 37..19 37..25 37..23 37..29 36..21
0.024222 0.013045 0.000004 0.000004 0.000004 0.026298 0.013109 0.012278 0.000004 0.000004 0.011176 0.000004 0.000004 0.000004 0.000004 0.011156 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.012581 0.056417 0.014718 0.012956 0.012949 0.012904 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.012904 0.011554 5.557426 0.984471 0.000000 0.074887 5.585802
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.258358
(12: 0.024222, (18: 0.000004, 4: 0.000004, 14: 0.000004): 0.013045, (((11: 0.000004, 13: 0.000004, 17: 0.011176, 16: 0.000004, 27: 0.000004, 26: 0.000004, 1: 0.000004, 2: 0.011156, 6: 0.000004, 5: 0.000004, 7: 0.000004, 10: 0.000004, 24: 0.000004, 28: 0.000004): 0.012278, 3: 0.012581): 0.013109, ((22: 0.012956, 30: 0.012949, (8: 0.000004, 15: 0.000004, 9: 0.000004): 0.012904, 20: 0.000004, 19: 0.000004, 25: 0.000004, 23: 0.000004, 29: 0.012904): 0.014718, 21: 0.011554): 0.056417): 0.026298);
(C212: 0.024222, (C213: 0.000004, C215: 0.000004, C220: 0.000004): 0.013045, (((C5: 0.000004, C59: 0.000004, C4: 0.011176, C187: 0.000004, C39: 0.000004, C51: 0.000004, C154: 0.000004, C182: 0.011156, C136: 0.000004, C16: 0.000004, C192: 0.000004, C3: 0.000004, C263: 0.000004, C84: 0.000004): 0.012278, C179: 0.012581): 0.013109, ((C262: 0.012956, C67: 0.012949, (C278: 0.000004, C223: 0.000004, C73: 0.000004): 0.012904, C247: 0.000004, C248: 0.000004, C251: 0.000004, C261: 0.000004, C48: 0.012904): 0.014718, C27: 0.011554): 0.056417): 0.026298);
Detailed output identifying parameters
kappa (ts/tv) = 5.55743
MLEs of dN/dS (w) for site classes (K=3)
p: 0.98447 0.00000 0.01553
w: 0.07489 1.00000 5.58580
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.024 209.3 57.7 0.1605 0.0038 0.0236 0.8 1.4
31..32 0.013 209.3 57.7 0.1605 0.0020 0.0127 0.4 0.7
32..18 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
32..4 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
32..14 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
31..33 0.026 209.3 57.7 0.1605 0.0041 0.0256 0.9 1.5
33..34 0.013 209.3 57.7 0.1605 0.0021 0.0128 0.4 0.7
34..35 0.012 209.3 57.7 0.1605 0.0019 0.0120 0.4 0.7
35..11 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
35..13 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
35..17 0.011 209.3 57.7 0.1605 0.0017 0.0109 0.4 0.6
35..16 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
35..27 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
35..26 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
35..1 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
35..2 0.011 209.3 57.7 0.1605 0.0017 0.0109 0.4 0.6
35..6 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
35..5 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
35..7 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
35..10 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
35..24 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
35..28 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
34..3 0.013 209.3 57.7 0.1605 0.0020 0.0123 0.4 0.7
33..36 0.056 209.3 57.7 0.1605 0.0088 0.0550 1.8 3.2
36..37 0.015 209.3 57.7 0.1605 0.0023 0.0144 0.5 0.8
37..22 0.013 209.3 57.7 0.1605 0.0020 0.0126 0.4 0.7
37..30 0.013 209.3 57.7 0.1605 0.0020 0.0126 0.4 0.7
37..38 0.013 209.3 57.7 0.1605 0.0020 0.0126 0.4 0.7
38..8 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
38..15 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
38..9 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
37..20 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
37..19 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
37..25 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
37..23 0.000 209.3 57.7 0.1605 0.0000 0.0000 0.0 0.0
37..29 0.013 209.3 57.7 0.1605 0.0020 0.0126 0.4 0.7
36..21 0.012 209.3 57.7 0.1605 0.0018 0.0113 0.4 0.6
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C154)
Pr(w>1) post mean +- SE for w
30 H 0.951* 5.313
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C154)
Pr(w>1) post mean +- SE for w
30 H 0.771 4.213 +- 3.028
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 0.859 0.134 0.006 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.187 0.144 0.122 0.107 0.095 0.085 0.077 0.068 0.061 0.054
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.017
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.002 0.015 0.162
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.003 0.019 0.119 0.659
sum of density on p0-p1 = 1.000000
Time used: 3:40
Model 7: beta (10 categories)
TREE # 1: (12, (18, 4, 14), (((11, 13, 17, 16, 27, 26, 1, 2, 6, 5, 7, 10, 24, 28), 3), ((22, 30, (8, 15, 9), 20, 19, 25, 23, 29), 21))); MP score: 20
lnL(ntime: 37 np: 40): -467.404546 +0.000000
31..12 31..32 32..18 32..4 32..14 31..33 33..34 34..35 35..11 35..13 35..17 35..16 35..27 35..26 35..1 35..2 35..6 35..5 35..7 35..10 35..24 35..28 34..3 33..36 36..37 37..22 37..30 37..38 38..8 38..15 38..9 37..20 37..19 37..25 37..23 37..29 36..21
0.023189 0.011732 0.000004 0.000004 0.000004 0.023697 0.011799 0.011826 0.000004 0.000004 0.011330 0.000004 0.000004 0.000004 0.000004 0.011304 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.011311 0.050859 0.013034 0.011667 0.011663 0.011623 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.011622 0.010639 4.723833 0.058371 0.431575
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.237385
(12: 0.023189, (18: 0.000004, 4: 0.000004, 14: 0.000004): 0.011732, (((11: 0.000004, 13: 0.000004, 17: 0.011330, 16: 0.000004, 27: 0.000004, 26: 0.000004, 1: 0.000004, 2: 0.011304, 6: 0.000004, 5: 0.000004, 7: 0.000004, 10: 0.000004, 24: 0.000004, 28: 0.000004): 0.011826, 3: 0.011311): 0.011799, ((22: 0.011667, 30: 0.011663, (8: 0.000004, 15: 0.000004, 9: 0.000004): 0.011623, 20: 0.000004, 19: 0.000004, 25: 0.000004, 23: 0.000004, 29: 0.011622): 0.013034, 21: 0.010639): 0.050859): 0.023697);
(C212: 0.023189, (C213: 0.000004, C215: 0.000004, C220: 0.000004): 0.011732, (((C5: 0.000004, C59: 0.000004, C4: 0.011330, C187: 0.000004, C39: 0.000004, C51: 0.000004, C154: 0.000004, C182: 0.011304, C136: 0.000004, C16: 0.000004, C192: 0.000004, C3: 0.000004, C263: 0.000004, C84: 0.000004): 0.011826, C179: 0.011311): 0.011799, ((C262: 0.011667, C67: 0.011663, (C278: 0.000004, C223: 0.000004, C73: 0.000004): 0.011623, C247: 0.000004, C248: 0.000004, C251: 0.000004, C261: 0.000004, C48: 0.011622): 0.013034, C27: 0.010639): 0.050859): 0.023697);
Detailed output identifying parameters
kappa (ts/tv) = 4.72383
Parameters in M7 (beta):
p = 0.05837 q = 0.43158
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00000 0.00000 0.00001 0.00018 0.00322 0.03670 0.27131 0.88503
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.023 210.5 56.5 0.1196 0.0030 0.0253 0.6 1.4
31..32 0.012 210.5 56.5 0.1196 0.0015 0.0128 0.3 0.7
32..18 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
32..4 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
32..14 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
31..33 0.024 210.5 56.5 0.1196 0.0031 0.0258 0.7 1.5
33..34 0.012 210.5 56.5 0.1196 0.0015 0.0129 0.3 0.7
34..35 0.012 210.5 56.5 0.1196 0.0015 0.0129 0.3 0.7
35..11 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
35..13 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
35..17 0.011 210.5 56.5 0.1196 0.0015 0.0123 0.3 0.7
35..16 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
35..27 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
35..26 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
35..1 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
35..2 0.011 210.5 56.5 0.1196 0.0015 0.0123 0.3 0.7
35..6 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
35..5 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
35..7 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
35..10 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
35..24 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
35..28 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
34..3 0.011 210.5 56.5 0.1196 0.0015 0.0123 0.3 0.7
33..36 0.051 210.5 56.5 0.1196 0.0066 0.0554 1.4 3.1
36..37 0.013 210.5 56.5 0.1196 0.0017 0.0142 0.4 0.8
37..22 0.012 210.5 56.5 0.1196 0.0015 0.0127 0.3 0.7
37..30 0.012 210.5 56.5 0.1196 0.0015 0.0127 0.3 0.7
37..38 0.012 210.5 56.5 0.1196 0.0015 0.0127 0.3 0.7
38..8 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
38..15 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
38..9 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
37..20 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
37..19 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
37..25 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
37..23 0.000 210.5 56.5 0.1196 0.0000 0.0000 0.0 0.0
37..29 0.012 210.5 56.5 0.1196 0.0015 0.0127 0.3 0.7
36..21 0.011 210.5 56.5 0.1196 0.0014 0.0116 0.3 0.7
Time used: 9:06
Model 8: beta&w>1 (11 categories)
TREE # 1: (12, (18, 4, 14), (((11, 13, 17, 16, 27, 26, 1, 2, 6, 5, 7, 10, 24, 28), 3), ((22, 30, (8, 15, 9), 20, 19, 25, 23, 29), 21))); MP score: 20
lnL(ntime: 37 np: 42): -466.987494 +0.000000
31..12 31..32 32..18 32..4 32..14 31..33 33..34 34..35 35..11 35..13 35..17 35..16 35..27 35..26 35..1 35..2 35..6 35..5 35..7 35..10 35..24 35..28 34..3 33..36 36..37 37..22 37..30 37..38 38..8 38..15 38..9 37..20 37..19 37..25 37..23 37..29 36..21
0.024214 0.013034 0.000004 0.000004 0.000004 0.026278 0.013099 0.012274 0.000004 0.000004 0.011177 0.000004 0.000004 0.000004 0.000004 0.011157 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.012572 0.056374 0.014703 0.012946 0.012939 0.012894 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.012894 0.011549 5.552174 0.984554 8.093978 99.000000 5.583189
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 0.258192
(12: 0.024214, (18: 0.000004, 4: 0.000004, 14: 0.000004): 0.013034, (((11: 0.000004, 13: 0.000004, 17: 0.011177, 16: 0.000004, 27: 0.000004, 26: 0.000004, 1: 0.000004, 2: 0.011157, 6: 0.000004, 5: 0.000004, 7: 0.000004, 10: 0.000004, 24: 0.000004, 28: 0.000004): 0.012274, 3: 0.012572): 0.013099, ((22: 0.012946, 30: 0.012939, (8: 0.000004, 15: 0.000004, 9: 0.000004): 0.012894, 20: 0.000004, 19: 0.000004, 25: 0.000004, 23: 0.000004, 29: 0.012894): 0.014703, 21: 0.011549): 0.056374): 0.026278);
(C212: 0.024214, (C213: 0.000004, C215: 0.000004, C220: 0.000004): 0.013034, (((C5: 0.000004, C59: 0.000004, C4: 0.011177, C187: 0.000004, C39: 0.000004, C51: 0.000004, C154: 0.000004, C182: 0.011157, C136: 0.000004, C16: 0.000004, C192: 0.000004, C3: 0.000004, C263: 0.000004, C84: 0.000004): 0.012274, C179: 0.012572): 0.013099, ((C262: 0.012946, C67: 0.012939, (C278: 0.000004, C223: 0.000004, C73: 0.000004): 0.012894, C247: 0.000004, C248: 0.000004, C251: 0.000004, C261: 0.000004, C48: 0.012894): 0.014703, C27: 0.011549): 0.056374): 0.026278);
Detailed output identifying parameters
kappa (ts/tv) = 5.55217
Parameters in M8 (beta&w>1):
p0 = 0.98455 p = 8.09398 q = 99.00000
(p1 = 0.01545) w = 5.58319
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09846 0.09846 0.09846 0.09846 0.09846 0.09846 0.09846 0.09846 0.09846 0.09846 0.01545
w: 0.03871 0.04975 0.05721 0.06366 0.06983 0.07614 0.08302 0.09110 0.10184 0.12145 5.58319
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
31..12 0.024 209.3 57.7 0.1603 0.0038 0.0236 0.8 1.4
31..32 0.013 209.3 57.7 0.1603 0.0020 0.0127 0.4 0.7
32..18 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
32..4 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
32..14 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
31..33 0.026 209.3 57.7 0.1603 0.0041 0.0256 0.9 1.5
33..34 0.013 209.3 57.7 0.1603 0.0020 0.0128 0.4 0.7
34..35 0.012 209.3 57.7 0.1603 0.0019 0.0120 0.4 0.7
35..11 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
35..13 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
35..17 0.011 209.3 57.7 0.1603 0.0017 0.0109 0.4 0.6
35..16 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
35..27 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
35..26 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
35..1 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
35..2 0.011 209.3 57.7 0.1603 0.0017 0.0109 0.4 0.6
35..6 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
35..5 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
35..7 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
35..10 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
35..24 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
35..28 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
34..3 0.013 209.3 57.7 0.1603 0.0020 0.0123 0.4 0.7
33..36 0.056 209.3 57.7 0.1603 0.0088 0.0550 1.8 3.2
36..37 0.015 209.3 57.7 0.1603 0.0023 0.0143 0.5 0.8
37..22 0.013 209.3 57.7 0.1603 0.0020 0.0126 0.4 0.7
37..30 0.013 209.3 57.7 0.1603 0.0020 0.0126 0.4 0.7
37..38 0.013 209.3 57.7 0.1603 0.0020 0.0126 0.4 0.7
38..8 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
38..15 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
38..9 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
37..20 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
37..19 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
37..25 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
37..23 0.000 209.3 57.7 0.1603 0.0000 0.0000 0.0 0.0
37..29 0.013 209.3 57.7 0.1603 0.0020 0.0126 0.4 0.7
36..21 0.012 209.3 57.7 0.1603 0.0018 0.0113 0.4 0.6
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C154)
Pr(w>1) post mean +- SE for w
30 H 0.945 5.283
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C154)
Pr(w>1) post mean +- SE for w
30 H 0.846 4.109 +- 2.919
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.024 0.976
p : 0.840 0.137 0.020 0.003 0.001 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.003 0.022 0.052 0.084 0.113 0.141 0.168 0.195 0.221
ws: 0.220 0.164 0.129 0.106 0.089 0.077 0.066 0.057 0.049 0.043
Time used: 19:18
Model 1: NearlyNeutral -467.358663 Model 2: PositiveSelection -466.982371 Model 7: beta -467.404546 Model 8: beta&w>1 -466.987494 Model 2 vs 1 .752584 Model 8 vs 7 .834104
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
