--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -38297.29 -38315.68
2 -38297.57 -38314.14
--------------------------------------
TOTAL -38297.42 -38315.19
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 12.189746 0.239712 11.303160 13.249910 12.172940 1027.40 1036.94 1.002
r(A<->C){all} 0.183159 0.000062 0.167276 0.198417 0.183099 376.61 706.55 1.000
r(A<->G){all} 0.273996 0.000087 0.255160 0.291219 0.273827 502.00 508.10 1.002
r(A<->T){all} 0.095238 0.000021 0.085959 0.103832 0.095221 703.00 812.53 1.000
r(C<->G){all} 0.120400 0.000051 0.106770 0.134523 0.120397 719.08 822.91 1.000
r(C<->T){all} 0.268801 0.000075 0.251500 0.285372 0.268645 516.51 569.04 1.002
r(G<->T){all} 0.058406 0.000015 0.050413 0.065507 0.058439 904.98 961.84 1.000
pi(A){all} 0.247913 0.000016 0.239245 0.254959 0.247983 494.71 504.91 1.000
pi(C){all} 0.190849 0.000011 0.184871 0.197486 0.190765 683.48 695.42 1.000
pi(G){all} 0.196018 0.000015 0.188050 0.203113 0.195908 627.26 645.07 1.000
pi(T){all} 0.365220 0.000024 0.355768 0.374912 0.365189 530.56 556.09 1.001
alpha{1,2} 0.525910 0.000551 0.479090 0.568085 0.525167 1066.28 1197.92 1.001
alpha{3} 4.578533 0.378930 3.458001 5.782537 4.526577 1355.44 1428.22 1.000
pinvar{all} 0.003815 0.000007 0.000002 0.008887 0.003352 1280.72 1338.79 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -44058.026466
Model 2: PositiveSelection -44058.026466
Model 7: beta -43318.986989
Model 8: beta&w>1 -43297.312135
Model 2 vs 1 0
Model 8 vs 7 43.349708
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
13 T 0.808 1.626
15 F 0.998** 1.959
16 S 0.859 1.716
59 S 0.997** 1.957
101 G 0.575 1.215
116 A 0.975* 1.918
129 I 1.000** 1.961
225 S 0.720 1.472
262 T 0.865 1.726
428 P 0.852 1.702
450 D 0.653 1.349
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
13 T 0.700 1.289 +- 0.559
15 F 0.928 1.541 +- 0.398
16 S 0.712 1.303 +- 0.548
18 P 0.530 1.079 +- 0.583
59 S 0.958* 1.570 +- 0.378
101 G 0.670 1.241 +- 0.601
116 A 0.865 1.477 +- 0.463
126 A 0.637 1.180 +- 0.627
129 I 0.986* 1.595 +- 0.347
132 D 0.601 1.156 +- 0.627
142 A 0.657 1.217 +- 0.620
144 V 0.629 1.179 +- 0.626
225 S 0.635 1.210 +- 0.550
262 T 0.791 1.388 +- 0.506
428 P 0.792 1.391 +- 0.518
450 D 0.778 1.360 +- 0.555
-- Starting log on Thu Oct 27 00:04:09 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.14 sec, SCORE=998, Nseq=18, Len=1552
C1 ---MFIVFLISYTTFLIPY-------------TATTTCFSGPTTENK-LN
C2 -----MLILFVFLPFITAD-----------------TCLNFTNLAAPAYN
C3 -----MLILFVFLPFITAD-----------------TCLNFTNLAAPAYN
C4 MLRNKKFLSLFVFSVVLPCAY-----------SNTGTCSNTINRFMY-LK
C5 MLRNKKFLSLFVFSVVLPCAY-----------SNTGTCSSTINRFMY-LK
C6 ----MWAILLILPAVLA------RPSCI-KS-SVSLSSIEHNVTYQS-FV
C7 -MILSLLLLVIAVCVNNNYAWLGLQRNAIPPSNQDGECGGDPGKLPN-LN
C8 ----MLFLAVYAAELLVLITQIPAVFSYG---GERFTCSPNYASLPN-LN
C9 ----MLSLAVYFAELLVIISYLPDLVT-----GDLNGCADGHNRLPN-LN
C10 ----MLSLAIYIAEILAFLQ-LPDLTTGAP--NKDGDCGDGYNRLPN-LN
C11 ----MLLTVVLSLALIACDASATRPECFANS-NFQLYPRNHTVNITS-LS
C12 ----MVVLLFVMFSLVVAD----RPNCYLP--QYSYTISPATITNTSYFN
C13 ----MVVLLFAILSIALAD----RPLCTINTGNYVLNPIQANITYTVVNS
C14 ----MTRLMCLLMSLLIFVRGCEAQFVDMSPASNNSECLDSQVDAAAFSK
C15 ---MFIVFLISYTTFLIPY-------------TATTTCFSGPTIENK-LN
C16 ----MKILIFAFLVTLV---------------KAQEGCGVINLKTQPTLT
C17 -MTYSVSLLMCLLTFIGAN----AKIVSIPGGVGTGACPQVDMQPSYFIK
C18 ----MTHLMFLLMFLLTPI----RGDVDLGPDSTRDTCDEVVVQVSA-FQ
C1 IS-------SGSRGVY-YPDDIFR---------S-NVSVLVTGRFLRFNT
C2 IA------SSSRRGVY-YPDDIFR---------S-DFLHLVNDYFLPFGS
C3 IA------SSSRRGVY-YPDDIFR---------S-DFLHLVNDYFLPFGS
C4 LGLPESVNDAYVSGYLPVRDNWTCS------AGF-WQYYNAHAIFMSYYS
C5 LGLPESVNDAYVSGYLPVRDNWTCS------AGF-WQYYNAHAIFMSYYS
C6 LS---------KVSCL-LPDPFIA----------YSGQTLKQSIYYADTT
C7 LGLPPN-KTVFVSGYLPLHKGWVCPTHPLGGGGYGTTFNDIHAIYWSYHS
C8 LGLPPN-STVLVSGYLPRPGDWVC------YTGT-TTHDNIRGVFWSYYS
C9 LGLPPN-STVFVSGYLPRKNGWECPTINNQYGGS-TNYENVHGIFWSYHS
C10 LGLPPN-STVFVSGYLPQKTGWVCP--ENKEAGA-TSYEGVHGVFWSYYA
C11 VN---------VANLL-LPDPYIA----------YSGQTLRQNLFMADLS
C12 VN---------PISIV-VPEFSVA----------RTNLVVRQRLQVAAYD
C13 IN---------PVSLV-VPEFSIA----------RTNLVVRQRLYVA-AT
C14 LMWPYPIDPSKVDGII-YPVGRTY----------SNITLSYTGLFPLQGD
C15 IS-------SGSRGVY-YPDDIFR---------S-NVSVLVTGRFLRFNT
C16 QV------SSSRRGVY-YNDDIFR---------S-DVLHLTQDYFLPFHS
C17 HNWPEPIDMNKADGVI-YPNGRTY----------SNITLQTTNLFPRNGD
C18 KDWPQPINPLFADGII-YPTGRSY----------SNISLSYQGLFPRQGD
.
C1 TLTWYN------S---WN----------QAYSSPVLPFGHG--VYFST--
C2 NVTQFY------T---QG----------TNIDNPTLPFRDG--VYFAA--
C3 NVTQFY------T---QG----------TNIDNPTLPFRDG--VYFAA--
C4 TAMDFAIGVGSSKSYN------------TKWGLYFWQKNNGYRAVFRICK
C5 TAMDFAIGVGSSKSYN------------TKWGLYFWQKNNGYRAVFRICK
C6 NVTVYPVTPYKKD--SKA----------TMYNTTQVLVGNG--LFVHTYM
C7 TANAVELAVSSGNGSVTR----------D-WSLYVHHSNNQGYMYFKICR
C8 HGSAVAIGISNKDQTTTP----------DQWALFAHHSNNGGQFYLRICK
C9 TAQRFELGVSNKDQLVNT----------NRWALYVYQNNNEGVLKLRICK
C10 TGQDVEIGVSNFRQLNNT----------NRWALYVHQKNNDHVLHFRICK
C11 RTIIYPITPPAKDS-TGG----------YIYNTTILPVASG--LFVHTWM
C12 -FTKIPITPPHRS----------------IFNNTYFRVGDG--ILVNTHM
C13 NFTRIPITPPGRA---------------VIFNNTYFDAEDG--FFVNTHM
C14 LGTQYLYSVSHAVGHDGDPTTAYI----SNYSLLVNAFDNGFVVRIGAAA
C15 TLTWYN------S---WN----------QAYSSPVLPFGHG--VYFST--
C16 NLTQYFSLNIESD---KI----------VYFDNPILKFGDG--VYFAA--
C17 LGTQYVYSASNEKSRTSNVAFI------SNYSYYGNPFGDGIVIRIGQNS
C18 LGRQYIYSVTHAGDSTLYPPQGIGKHFISNYSAETLPFGNGFVVRIGFSA
.
C1 IDKSNVVRGW--------------IFGTTLDNTTQSA---------LLV-
C2 TEKSNIVRGW--------------IFGSTLDSTSQSA---------IIL-
C3 TEKSNIVRGW--------------IFGSTLDSTSQSA---------IIL-
C4 W-DSKIEPSFQPSNQQARECLINKEFYMGFGHAKNQIFGVSWSGNRVTLH
C5 W-DSKIEPSFKPSNQQARECLINKEFYMGFGHALNQIFGVSWSGNRVTLH
C6 YREQDSSTY--------CQEPFGVVFGTTFEQDRIAI---------IMIV
C7 W-GAVYPLNLSPNHNRG-DCLVNRKFNFRFLHGANQVLGVTWSSNYVTLY
C8 WLNGG-NLDWATESSRG-LCIVNRKFRFQFSHAAGQVIGVTWSSNVVTFY
C9 WLRGQYSLQWLHGARHG-QCAVDRAFNFRFVHAENQVLGVTWSSNYVTFY
C10 WLAGTYTPQSRPWSRYG-QCAVDKRISFTFEHQGNQVLGVTWSSNYVTFY
C11 YRQESTSRTY-------CQEPFGVAFGDTFIQDRIAI---------VIIA
C12 YHRTNIATNLG-SSFYGCQEPFGAAFGNTFVNEPITL---------VMFY
C13 YHTNNIATSPNKPNFYGCQEPFGVAFGNTFENEPITL---------VMVY
C14 NSTGTIVISPSVQTKIKKAYP-AFILGSSLTNTSAGL--PLYANYSLTII
C15 IDKSNVVRGW--------------IFGTTLDNTTQSA---------LLV-
C16 TEKSNVIRGW--------------VFGSTFDNTTQSA---------IIV-
C17 NKTGSVIVGTAQTTIKKIYPA--LMLGSSFGNFSVNNKSGAYFNHTLLIL
C18 NKTGSLVISPTTSKVIKKIYP-AFMLGTAVTSFAHGH-AGRYLNHTLVIL
: . : .
C1 ------------NNGSAITIEVC-YFQFCDNPAFIISGGAQTN-TAIYIN
C2 ------------NNSTNLIVRVC-NFELCKVPLFVVFKSNNSQLSHLFSD
C3 ------------NNSTNLIVRVC-NFELCKVPLFVVFKSNNSQLSHLFSD
C4 TLDKVVSFFVEGADAWDYASYRCANGYSCA--HQVVYTPVTLRITTVPEG
C5 TLDKVVSFFVEGADTWDYASYRCANGYSCA--HQVVYTPVTLRITTVPQG
C6 PGNLGSWPTVSKPTTIKVYIIVGSNATICAYPAFNRWGPAG---QFYADD
C7 GLNNTYRFYL--HNNWERATVRCHTKQSCA--FFPVENVTTLNITTNGEG
C8 G-SRSYRYYL--TNNWNRVDVKCVNYPTCI--INPVRNITTFNVTTNAQG
C9 GINGSYRYYI--PNDWFRVSVKCENKYVCA--IYPVYNQTTLNITTNAKG
C10 GISKSYRYFL--KNDWYRVTVKCLNKYACA--LYPVYNQTTLNITTNARG
C11 PDNLGSWNQVSYRNVTTVHLVVCSNATLCINPGFNRWGPAG---NIIASN
C12 AGNVGSWSSLVTQQQANITIVSCDNATLCANPFFLRWGPGVIR-SFTISN
C13 AGNIGSWTNTVTQTSANITIVSCDNATLCSNPLYLRWGPGGLP-GYVIKD
C14 PDGCGTVLHAFYCILQPRTQNRCPGNGGYK--AYFVYETIHNDCVPAINK
C15 ------------NNGSAITIEVC-YFQFCDNPAFIISGGAQTN-TAIYIN
C16 ------------NNSTHIIIRVC-YFNLCKDPMYTVSAGTQVS-SWVYQS
C17 PSKCGTVFQVAYCLLQPRTDSYCPGNANYV--SYALIDSPT-DCTSADES
C18 PESCGTSLTVFYCILEPRNGTRCPNHQDYT--SYVIWETPHLDCGSSVNR
C1 LRN--CTYVDTLRDLPL-SFAEVDGGFKHLREFVFKNSDGFLHIYGAYQ-
C2 SFN--CTFEYVSRAFSL-DIREQSGNFVDLREFVFRNRNGFLHIYEGYE-
C3 SFN--CTFEYVSRAFSL-DIREQSGNFVDLREFVFRNRNGFLHIYEGYE-
C4 IRS-YDLCTNCSGFPEH-VFAVLDGGEIPP-NFDFTN---WFYLTNASS-
C5 IRS-YDLCTNCSGFPEH-VFAVLDGGEIPP-NFDFTN---WFYLTNASS-
C6 AFV--NHGDSCFVNNTF-EIPLNTSRI----NLAFRFNDGNLLLYHSRW-
C7 LIESYDVCADCGGFPVH-VFPVLEHGYIPN-DFSFSN---WFMLSNTST-
C8 LFQSYTVCDDCNGFPQH-VFAVLDGGYIPS-EFGLDN---WYVLSNTST-
C9 LIKEYSVCESCNGFPAH-VFPVLEGGKIPA-DFDFTN---WFYLSNTST-
C10 LIQSYSVCDSCNGFPAH-VFPVLEGGKIPA-DFDFTN---WFYLTNSST-
C11 ALV--DHSNSCFVNNSF-NVSISTSRI----NLAFLFKDGDLLIYHSNW-
C12 AFQ--CHGNYTFYDTKLVNFTVSTARY----NLAFTFADGDIFMY--YA-
C13 AFH--CHGDYTFYDSKIINFSVDSSRY----NFAFSFADGDIFMY--YA-
C14 --N------ASLNSFKT-FFDLVNCTFFDSWDITADEVKEWFGITQDTQG
C15 LRN--CTYVDTLRDLPL-SFEDVDGGFKHLREFVFKNSDGFLHIYGAYQ-
C16 AFN--CTYDRVKKSFQL-DTSPKTGNFTDLREFVFKNRDGFFTVYQTYT-
C17 KRR------NGLEDIKK-YFNLVNCTYFEEFNVTADERAEWFGITQDSQG
C18 --N------ATLNSFKV-SFNLRQCKFMRTYNISDDENQEWFGITQNAQG
:. :
C1 --PHDLDIGAPAALPAQFLPLKPLWKLPLGLNITNYKVV----TTLKP--
C2 --AISIVRGLPAGFNV----LKPLLKIPFGLNVTSFKTF----LTVYR--
C3 --AISIVRGLPAGFNV----LKPLLKIPFGLNVTSFKTF----LTVYR--
C4 --PVSGRVVGVQPLQ-----LLCLWPIPALLGTATDITFDRNGTSDVRCN
C5 --PVSGRVVGVQPLQ-----LLCLWPIPALLGTATDITFDRNGTSDVRCN
C6 --LPTSGLNLLEDTP-----LHFYMSVGVGANLPNAQFF----QSLSR--
C7 --FLQGKLVSTQPLK-----LMCLWPVPSLLANDEKIFFN---ASGATCN
C8 --VLDGRVLTNQPLL-----VACLWPVPSLLSNDNPIHFNMSLNTGVNCN
C9 --LVAGRVVGIQPLR-----LLCLWPVPSTTANDDKIYFN---TTGANCN
C10 --LVAGRVVGIQPLK-----LLCLWPVPSITANDDKIYFN---TTGANCN
C11 --LPKGSFDFNQSFP-----LQYFMTLPVGGNLPRAQFF----QSIVRQG
C12 --ALGDSLNLPTAYP-----LQPYLRIPAGFKPDVVQFF----QAITRP-
C13 --PLGDSQNVAKAFP-----LQPYLRIPAGFKPKRAQFF----QAIIRK-
C14 VHLYSSRKGDLYGGN-----MFRFATLPV---YDAIKYY----TVIPR--
C15 --PYDLAIGATAALPAQFLPLKPLWKLPLGLNITNYKVV----TTLKP--
C16 --PVNLLRGLPSGLSV----LKPILKLPFGINITSFRVV----MAMFS--
C17 VHLYTSRKNGFNSNN-----LFLFASVPI---YDKINYY----TVIPR--
C18 VHLYSSRKGDLYGGN-----MFLFDTLPV---YETLKYY----TVIPR--
: :
C1 --------TNQAFQAAYIVGNLKHTTMMLSFNENG-----TMSNAID---
C2 ----VAAGSISVASSAYFVGYLKPLTFMLSYDLNG-----TINNAVD---
C3 ----VAAGSISVASSAYFVGYLKPLTFMLSYDLNG-----TINNAVD---
C4 GFSSNATADAMRFSLNFTENGVFAKEGVITLKTVSNTFKFSCSNSSTYTS
C5 GFSSNATADAMRFSLNFTENGVFAKEGVITLKTVSNTFKFSCSNSSTYTR
C6 SLDGSGDGKCFSAQNNLYIAPIVQRELLVAYSDAG-----IPTKVAD---
C7 GYQFDGVADAIRFSLNFSSDQVFNGVNNIVFDVEGGTFEFFCTNDTSVNP
C8 GYSEVREVSHLRFALNFTNQQVLNGVHNIDLLGDTFNFTFTCTNNSDITK
C9 GFVGEGVADALRFSLNFTSNQVLNGVHNIILESTSSKFTFTCRNDSESTF
C10 GFVGEGVADALRFSLNFTANQILNGVHNIILEGTEAKFTFTCRNDSESTL
C11 GTNNGADDRCVDFNISLHIAHLVNRDLLVSYFNNG-----SVANAAD---
C12 -NGESAEVACASSTVSWYVSRLYYKELLVGYDSYS-----SIVNVSF---
C13 -TAEDAEFQCSRYTTSWYVSYLKYHELLVGYDANS-----IISNVST---
C14 --SFRAKANRRESWAAFYVYKLHQLTYLLDFSVDG-----YIRRTID---
C15 --------TNQAFQAAYIVGNLKHTTMMLSFNENG-----TMSNAID---
C16 ----KTTSNYVPESAAYYVGNLKQSTFMLSFNQNG-----TIVDAVD---
C17 --SIITPANQRSAWAAFYVYPLHQLSYLLNFDVNG-----YITQAAD---
C18 --SLRSRLNERQAWAAFYVYSLHKLTYLLDFSVDG-----YVRRAID---
: :
C1 ----CSQDPLAELKCTLKQF---DVGKGIYQTSNFRVQPTVDVARFPNIT
C2 ----CSQDPLAELKCTIKNF---NVSKGIYQTSNFRVSPTREVVRFPNIT
C3 ----CSQDPLAELKCTIKNF---NVSKGIYQTSNFRVSPTREVVRFPNIT
C4 PY-VIPFGHIDQPYYCFTTFYINETTGTTATSFVGMLPPIVREFVITRLG
C5 PY-VIPFGHIDQPYYCFTTFFTNETTGATATSFVGMLPPIVREFVITRLG
C6 ----CSLNAGEELFCVTGTF---DPPTGVYPLSRYRAQLS-GSVHITQQL
C7 TYRYVPFGQLTEIYRCFVET---TAENGTHTTFVGILPPVVREIVVSRLG
C8 GERFVPFGFLDNVYRCFVYF---DVGNGTVNKFVGILPPVVKEIVISKFG
C9 YR--VPFGETGQVYYCFIFT---EAGNQSYNTFVGILPPVLKEIVISRYG
C10 FR--VPFGVTGQVYYCFVFT---ESRNQSYNTFVGILPPILKEIVISRYG
C11 ----CAESASEELYCVTGSF---QPPTGVYPLSRYRAQVD-GFVRVTQRG
C12 ----CSSDAESELQCLLGTF---APANGVYSLSNFRSSPT-DNVRITNSA
C13 ----CSFDAESELQCLLGTF---TPANGVYSLSNFRSSPV-DTVRITNSA
C14 ----CGHDDLSQLHCSYTSF---EVDTGVYSVSSYEASAT-GTFIEQPNA
C15 ----CSQDPLAELKCTLKQF---DVGKGIYQTSNFRVQPTVDVARFPNIT
C16 ----CSQDPLAELKCTTKSF---NVSKGIYQTSNFRVSPVTEVVRFPNIT
C17 ----CGYNDYTQLVCSYGDF---NMKSGVYSTSYYSAKPV-GAYYEAHVY
C18 ----CGYDDVAQLFCSYESF---DVDSGVYSVSSFEAQPR-GYFVEQPHS
. :
C1 NVC--PFDKVFNATRFPSVYAWERTKISD-----------------CVAD
C2 NRC--PFDSIFNASRFPSVYAWERTKISD-----------------CVAD
C3 NRC--PFDSIFNASRFPSVYAWERTKISD-----------------CVAD
C4 DVYLNGYRIFSVGEVVSVNFNISSTDHRDFWTVAFVKDAEVMLDIEDTYI
C5 DVYLNGYRIFSVGEVVSVNFNISSTDHRDFWTVAFVKNAEVMLDIEDTYI
C6 SHCALPYKDILDPPQ-PVV--WKRYTVAN-----------------CSFD
C7 AIYINGYRLISLPVIESIVFNVTSKVGSDFWTVAFAQDVEVLLELNATNI
C8 TVYINGVNMATLPPVNSVIFNVTSTVGSDFWTVGFTDLADVMIDINATRI
C9 SIYLNGVKLFSLPTLESVIFNVSSNVGSDFWTIAYAQDAQVMVDLNATSI
C10 SIYLNGVKLFSLPVLQSVIFNVSSKVGSDFWTVAYAQDAQVMVDLNATSI
C11 DYCQPPYADLLEPPQ-PVV--WRRFMLYN-----------------CAFD
C12 SSCSVPYSVLSRPPL-PFV--WKRYAISN-----------------CKFD
C13 KACSVPYNLLETPPL-PFV--WKRHSISN-----------------CKFD
C14 TEC--DFSPMLKGVA-PQVYNFKRLVFSN-----------------CNYN
C15 NVC--PFDKVFNATRFPSVYAWERTKISD-----------------CVAD
C16 NLC--PFDKVFNATRFPSVYAWERTKISD-----------------CVAD
C17 PDC--NFTDLFRENA-PTIMQYKRQVFTR-----------------CNYN
C18 SEC--DFSAMFSSQP-PQVYNFSRLVFTN-----------------CNYN
.
C1 YTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C2 YTVLYNSTSFSTFKCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C3 YTVLYNSTSFSTFKCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C4 KQLLYCNNPVNVVKCQQLK-FVLEDGFYSYVPASEDSLPRTIVRLPRFMT
C5 KQLLYCNNPVNVVKCQQLK-FVLEDGFYSYAPQSEDSLPRTIVRLPRFMT
C6 FDVIVNNLPTYELKCYGVAPTRLAQMCYSGVTLDVMRINST------HFT
C7 VDILYCESPINKLKCQQLT-FSLDDGFYPASSAYTEYTPRSYVALPYHAT
C8 VDLLYCDTPINKLKCQQLS-FSLDDGFYTTTNVYKQAVPRTYVALPYHAT
C9 TDLLYCDTPLNRLKCQQLS-YALEDGFYPTTNIYTKDIPRSYVALPYHAT
C10 TDLLYCDTPLNRLKCQQLS-YALEDGFYPTTNIYTRDIPRSYVALPYHAT
C11 FSVVIDNLPTHQLQCYGISPKRLASMCYSSVTIDVMRINAT------HLN
C12 FQALLSHLPTFQLRCFGISPTKLATMCFGTVTLDIMLVNVT------HYN
C13 FQALLSHLPSFQLRCYGISPTKLSSMCFGTVSLDVMLVNVT------HYN
C14 LTKLLSLFAVDEFSCNGISPDAIARGCYSTLTVDYFAYPLS------MKS
C15 YTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C16 YTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C17 LTLLLSLVQVDEFVCDKITPEALATGCYSSLTVDWFAFPYA------WKS
C18 LTRLLSLFQVSEFSCHQVSPSALASGCYSSLTVDYFAYPLS------MAS
. . * : : : :
C1 QVAPGQTGVIADY-----------------------NYKLPDD---FIG-
C2 QVAPGETGVIADY-----------------------NYRLPDD---FTG-
C3 QVAPGETGVIADY-----------------------NYRLPDD---FTG-
C4 HNFINVSVVVSFYFDDGKHDTPVGSDFYECATCAPKYYHVRFTDYWLDG-
C5 HQHINISVVVSFYFDDGQADTPVGSDFYACATCAPKYYKMVFADVDWTGI
C6 NMLGNVPDVFSMY-----------------------NYVLPTD---FYG-
C7 HTEVVLGVHLSLY-----------------------TKHSATL---NGG-
C8 HSAINITAEVSVN-----------------------SNDDRFL---INGL
C9 HAVLNITAYIGD------------------------KKDDRIQ---INGF
C10 HMVLNITAYIGD------------------------KKDDRIQ---INGF
C11 NLLNRVPDSFSLY-----------------------NYAVPDN---FYG-
C12 NLLNDVPDDFSLY-----------------------NYQLPRN---FYG-
C13 NLLNDVPDDFSLY-----------------------NYQLPRN---FYG-
C14 YIRPGSAGNIPLY-----------------------NYKQSFA---NPT-
C15 QVAPGQTGVIADY-----------------------NYKLPDD---FIG-
C16 QVAPGQTGVIADY-----------------------NYKLPDD---FTG-
C17 YLAIGSADRIVRF-----------------------NYNQDYS---NPS-
C18 YLRQGSTGPIAQF-----------------------NYKQDFT---NPT-
.
C1 ----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFE
C2 ----------CVIAWNTANQ------DVGSYFYRSHRSTKLK-----PFE
C3 ----------CVIAWNTANQ------DVGSYFYRSHRSTKLK-----PFE
C4 ----SNHTNVCVNTASFTTRLFTDYFGT-SGAVRIEIEPGTC-----PFG
C5 HGDILNVTGVCVNAASFTTKFRSSYLGADGVYVG--LEAGSC-----PFS
C6 ----------CVHAYYINST-NKRYTVAYQRGYSKVITPGGR-----QPY
C7 ------NDTICVNTTQFTTVLNAS---VYTG-ARGDVVNVNC-----PFT
C8 ------NGTFCVNTTQFTV--ITHFTQYTG--MRVAIENLDC-----PFT
C9 ------NDSFCVNTTQFTTN----FVQTDSGIIKAELKNGDC-----PFT
C10 ------NDSFCVNTTQFTTN----FVQTDSGIIKAELKNGDC-----PFT
C11 ----------CLHAFYLNST-T-----AYAVANRFPIKPGGR-----QSN
C12 ----------CLHSYYLPND-T-----AFSYTVASRIRYPSW-----VHS
C13 ----------CLHSYYLPNS-T-----TFNYIVASRSQSPSW-----VYN
C14 ----------CRVMASVPANVTITKPEAYGYISKCSRLTGDYQHIETPLY
C15 ----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFE
C16 ----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFE
C17 ----------CRIHSKVNSSVGISYSGLYSYITNCNYGGFNKDDVVKPGG
C18 ----------CRILAAVPSNVTIPLPQSYMWLTQCYTNSPSN-----SHY
*
C1 RDLSSEENGVLTLST----YDFNQNVPL---------E-YQATRVV----
C2 RDLSSDENGVRTLST----YDFNPYVPL---------D-YQATRVV----
C3 RDLSSDENGVRTLST----YDFNPYVPL---------D-YQATRVV----
C4 FD---TLNNYLAFGS----LCFSTV-P----------NGGCTMNIVTQGP
C5 FD---TLNNYLTFGS----LCFSTV-P----------NGGCTMNVVSKGP
C6 ND---YVRTLLNTPNE---IC------T---------R-ANCFGLV----
C7 WA---SLNDYLSFGT----ICFSFE-PL---------PGGCTMSIN-VVN
C8 LD---SLNNFLSFGS----ICFSTY-AV---------GGGCRMRLD-KVL
C9 FD---SINNYLTFDS----ICFSIE-PI---------GGGCTMNIV-RTW
C10 FD---SINNYLTFDS----ICFSIE-PI---------GGGCTMNIV-RTW
C11 RD---YIATVLNAAH----YT------T---------F-SYIFGLA----
C12 ITPGGRQPVGPFLDS----LQSSSK-PC---------T-GSCLGLA----
C13 ISPGGRQPPSSFLNT----LPGSAK-PC---------Q-GSCLGLA----
C14 INPG-EYSICRDFAP----WGFSEDGQVFKRTLTQFEGGGLLVGVGTRVP
C15 RDLSSEENGVLTLST----YDFNQNVPL---------E-YQATRVV----
C16 RDLSSEENGVRTLST----YDFNQYVPL---------E-YQATRVV----
C17 RASQPCVTGALNSPTNGQVWSFNFGGVP-----------YRTSRLTYTDH
C18 VEAG-SYTPCLGLAS----RGFNTFNSM---------HYDPATGLTATGS
:
C1 -------------VLSFELLNAPATVC---------GPKLSTPLVK--NQ
C2 -------------VLSFELLNAPATVC---------GPKLSTELVK--NQ
C3 -------------VLSFELLNAPATVC---------GPKLSTELVK--NQ
C4 YGQ----PHTFA-VLYVSYTDGDNIIGVPPSNIPAYGVADMSQVYL--DT
C5 YGE----PHTFA-VLYVSYTDGDNVIGVPPYNIPPYGVSDMSIVYF--DV
C6 -------------VISLNPASGSHLVC---------PTNNDTDVVE--NQ
C7 LGY----YTPFA-TLYVGYTRGHGITG---VSQKVGGIFDPSFITL--DT
C8 IST----PTPWR-ILNIVYTDGDRTTG---VTKASGGIFDPSELYV--GV
C9 FGQ----SVPWR-TLYVSYTKGSRITG---VKTPNTGVFDPSTFVE--DV
C10 FGQ----SVPWR-TLYVSYTKGSRITG---VKTPNTGVFDPSTFVE--DV
C11 -------------VITLKPASGNKLVC---------PIANDTDIIT--ER
C12 -------------VISLSIASANKLVC---------PVGNDTDIVP--DT
C13 -------------VISLSVASANKLVC---------PVGNDTDIVT--GN
C14 MTA----NLEMGFVISVQYGTDTNSVC------PMLDLGESSTITNRLGK
C15 -------------VLSFELLNAPATVC---------GPKLSTPLVK--NQ
C16 -------------VLSFELLNAPATVC---------GPKLSTSLVK--NQ
C17 LKN----PLDMVYVITVKYEPGAETVC-----PKQVRPDYSTNITGLLGS
C18 YQYISEEALEMAFIISVQYGTDSNSVC------PLQAVHNDTKVDDKLGR
: . : .
C1 CVNFNFNGLKGTGVLTD-SSKTFQSFQQFGRDASDFTDSVRDPQTLQILD
C2 CVNFNFNGLKGTGVLSS-SSKRFQSFQQFGRDASDFTDSVRDPQTLEILD
C3 CVNFNFNGLKGTGVLSS-SSKRFQSFQQFGRDASDFTDSVRDPQTLEILD
C4 CTTYTIYGMTGRGIITR-SNNTFITG-LYYTSNAGNLLAYKNSTTGIVYN
C5 CTTYTIYGMTGRGIITP-SNNTFITG-LYYTSLAGDLLAYKNSTNGIVYN
C6 CVKYNFYGYSGNGVLTK-SNLTIPDNKLFVASNTGSIIAVK--AQDTVYS
C7 CTEYTVYGITGKGVITS-LNKTIVAG-LYYTSTSGQLLGFKNSTTGEVFA
C8 CTDYTIYGISGRGIINQ-LNTTIIAG-LYYTSPAGQLLGFKNATTGDIYG
C9 CTDYTIYGMSGRGVISR-SNASYIAG-LYYTAISGQLLGFKNATTGETFV
C10 CTDYTIYGMSGRGVISR-SNASYIAG-LYYTAISGQLLGFKNATTGETFV
C11 CVQYSLYGYTGTGVLSKNTSLTVPNGKVFTASSTGAIIGVF--INGTMYS
C12 CVNYNIYGYQGTGVISR-SNYTLPSSKVFSLSSSGELTVFA--VGSSFYQ
C13 CVNYNIYGYQGTGVITT-SNYTLPSTKVFSLSASGELTVFS--VGSSFYQ
C14 CVDYSLYGVTGRGVFQN-CSAVGVKQQRFVYDSFDNLVGYY-SDDGNYYC
C15 CVNFNFNGLKGTGVLTD-SSKTFQSFQQFGRDASDFTDSVRDPQTLQILD
C16 CVNFNFNGFKGTGVLTD-SSKTFQSFQQFGRDASDFTDSVRDPQTLRILD
C17 CISYDIYGITGTGVFQL-CNATGIPQQKFVYDKFDNIIGFH-SDDGNYYC
C18 CIEYSLYGVTGRGVFQN-CTPVGLKQQRFVYDGFDNLVGYH-SDNGNYYC
* : . * * *:: . : .
C1 ISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTIHADHLTHSWRVY
C2 ITPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVPTAIRADQLTPAWRVY
C3 ITPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVPTAIRADQLTPAWRVY
C4 IYPCQLAGQVAVI--SDN------IVGMASSTPNVSLDFNVTVVADSFYY
C5 VYPCQLSGQVAVI--SDN------IVGMASSTPNVSLDFNVTVVADSFYY
C6 ISPCVSVPVSVGY--DPNYEQ-ALLFNGLECNQRAVAVSIPASAY-WLRT
C7 VRPCDLASQVAVY--QND------IIGAMTASRNSSFGFANVSELSNFYY
C8 VRPCALSSQAAVY--QNE------IIGVMTASANESFGFQNVTETPKFFY
C9 VVPCDLSSQAAVI--GDK------VVGVMTSITNSSFEFVKSIETPNFYY
C10 VVPCDLSSQAAVI--GDK------VVGVMTSITNSSFEFVKSIETPNFYY
C11 ITPCVTVPVSVGY--HANFER-VLLFNGLSCSQRSRAVSRPASTL-WNFS
C12 LSPCAFAPISAAF--YKGYTT-SLLFNNLPCSNRHRAVVEPVSAY-WRRS
C13 LSPCAFAPISAAF--YKGYTT-SLLFNNLPCSGRSRAVVEPVSDY-WRAS
C14 VRPCVSVPVSVIY--DKDTNLHATLFGSVACEHVTTMMSQFSRLTQSNLR
C15 ISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTIHADHLTHSWRVY
C16 ISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTLHADQLAPSWRVY
C17 VAPCVSVPVSVIY--DDNTNQYATLFGSVACQHISTMAAQFSRETRASLV
C18 VRPCVSVPVSVIY--DKATNNHATLFGSVACEHVDTMMSQFSRMTQSRLR
: ** . : .
C1 TTGPHV---FQTQAGCLIGAEHVN--VSYQCDIPI----GAGICASYHTA
C2 STGVNV---FQTQAGCLIGAEHVN--ASYECDIPI----GAGICASYHTA
C3 STGVNV---FQTQAGCLIGAEHVN--ASYECDIPI----GAGICASYHTA
C4 LSNSAE-----------------------PCDQPVLTYAGIGICADGSIT
C5 LSNSAE-----------------------PCDQPVLTYAGIGICADGSIT
C6 VSDNQTAGVFDTPSGCVYNVINRTDITVNACDMPI----GNSLCLINATS
C7 HSNGHL-----------------------GCEEPVLIYGKMGICSDGSLT
C8 HSNGNS-----------------------TCTEPVLTYGSVGVCPDGTLI
C9 LTNATA-----------------------NCTSPVITYGKLGVCEDGSIA
C10 LTNATA-----------------------NCTSPVITYGKLGVCEDGSIA
C11 VSDESA---IDTLSGCVVNAILHNDTTVSTCSMPL----GNSLCLINDTT
C12 VADNNT---FDTTAGCIFNAYNLTSIVVNQCDLPI----GDSYCLQPSLI
C13 VVNNST---FDTSAGCIFNAINSTSIVVNQCDLPI----GDSYCLQPSTI
C14 RRDSNA--PLQTAVGCVVGLSNNSL-VVSDCRLPL----GQSLCAVPPVT
C15 TTGPYV---FQTQAGCLIGAEHVN--ASYQCDIPI----GAGICASYHTA
C16 TTGPYV---FQTQAGCLIGAEHVN--ASYQCDIPI----GAGICASYHTA
C17 SRNMQN--LLQTSVGCVMGFHETND-TVEDCNLSL----GQSLCAIPPNT
C18 VRNIDDAGPMQTSVGCVVGLVNTSL-IVDNCQLPL----GQSLCAVPATT
. * .: . *
C1 SLLRSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTT
C2 STLRSVGQ------KSIVAYTMSLGAENSIAYANNS-IAIPTNFSISVTT
C3 STLRSVGQ------KSIVAYTMSLGAENSIAYANNS-IAIPTNFSISVTT
C4 NNTARRAA-----------------SDPISPVISGN-ISVPTNFTFSVQV
C5 NNTARRAA-----------------SDPISPVISGN-ISVPTNFTFSVQV
C6 TQARATSGDDTKSYLSLVNYDPTY-TSLTKVLTPVYWVSIPTNFTLAAGT
C7 EVNNKDAE-----------------QQPVSPIATAN-VTVPVNFTVSVQV
C8 MVQTRSGN-----------------VNPVSPIVSGN-ITIPLNFTVSVQV
C9 EVKVNTHV-----------------QTPVSPISTGN-ITVPSNFTVSVQV
C10 EVKVNTHV-----------------QTPVSPISTGN-ITVPSNFTVSVQV
C11 VAIAHAVG---LPKLYLVNYDPLYDNNSATPITPVYWVKIPTNFTLTATD
C12 KGFEATLS--------LVTYNPL--ADSLTPITPVYQVSVPTNFTLVAST
C13 SRQGSTLL--------LVTYDPL--SDTLTPITPVYEISVPTNFTLVAST
C14 SFRRRSAS---EFQLAVLNYTSPIVVTPIN--SSGFTAAIPTNFSFSVTQ
C15 SLLRSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTT
C16 SLLWSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTT
C17 NLRVGRST----FGLGSLAYNSPLRVDALN--SSEFKVSLPLNFTFGVTQ
C18 IRAATGTT--SSLQLATINFTEPHMLTPIN--SSRFIVEIPTNFSFGVTQ
:* **:. .
C1 EVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQ
C2 EVMPVSMAKTSVDCTMYICGDSQECSNLLLQYGSFCTQLNRALTGVALEQ
C3 EVMPVSMAKTSVDCTMYICGDSQECSNLLLQYGSFCTQLNRALTGVALEQ
C4 EYIQLMLKPVTVDCSVYVCNGNPRCLQLLAQYASACRTIEQALQ-LSARL
C5 EYIQLMLKPVTVDCSVYVCNGNPRCLQLLAQYASACRTIEQALQ-LSARL
C6 EYIQTTSPKINIDCAKYLCGDSDKCLTVLLQYGTFCDDVNKALAEVSSVI
C7 EYLQMYMQPVSVDCNTYVCSGNVHCLRLLTQYASACRNIESSLQ-LSARL
C8 EYLQMYLQPVSVDCNMYVCGGNPHCLRLMSQYASACRTIEESLQ-LGARL
C9 EYLQMYMRPVSVDCAMYVCNGNPHCLRLLTQYASACRTIEDALQ-LSARL
C10 EYLQMYMRPVSVDCAMYVCNGNPHCLRLLTQYASACRTIEDALQ-LSARL
C11 EFIQTNAPKVTIDCARYLCGDSSRCLNILLHYGTFCDDINKALAKVNTIL
C12 EYIQTYASKISIDCAKYLCGDSSQCRTVLLQYGTFCNDVNVALTRVFTLL
C13 EYIQTYASKISIDCAKYLCGDSSQCRTVLLQYGTFCNDVNVALTRVFTLL
C14 EYVETSIQKVTVDCKQYVCNGFSRCEKLLVEYGQFCSKINQALHGANLRQ
C15 EVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQ
C16 EVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQ
C17 EYIETSIQKITVDCKQYVCNGFAKCEKLLEQYGQFCSKINQALHGANLRQ
C18 EFIQTTIQKVTVDCKQYVCNGFEKCEQLLREYGQFCAKINQALHGANLRQ
* : .:** *:*.. .* :: .*. * :: :*
C1 DKNTQEVFAQVKQMYKTP-TIRDFGG-FNFSQIL----PDPLKPTKRSFI
C2 DKNTQEVFAQVKQMYKTP-AIKDFGG-FNFSQIL----PDPSKPTKRSFI
C3 DKNTQEVFAQVKQMYKTP-AIKDFGG-FNFSQIL----PDPSKPTKRSFI
C4 ESVEVNSMISISQQALDLGVIDNFNHDFNLTNVL------PASVGGRSAV
C5 ESVEVNSMISISQQALDLGVIDNFNHDFNLTNVL------PANVGGRSAV
C6 DSTMVSLVSELTADVVRS-ENTAFDTTYNFTSLMGCLGSSCNTRNYRSAL
C7 ESLEVNSAITVSERAASLANITNFEN-YNLSVLL------P-NLNGRSAM
C8 ESTEVANTISVSSQAVQLANITNFDS-YNVSVLL------P-RANGRSFI
C9 ESIEVNSVISVSEDALELANISNFDH-YNMSALL------P-KKNGRSFI
C10 ESIEVNSVISVSEDALELANISNFDH-YNMSALL------P-KKNGRSFI
C11 DSALLSLSKELSINTRDEIQSFAFGGDYNFTGLMGCLGPNCGATTYRSAL
C12 DNSLVDTFSSLKSTAPVQ---LAYTGDFNFTSLVGCIGTDCDSKSHRSAL
C13 DNSLVDTFSSLKSTAPAQ---LAYTGDFNFTSLVGCVGTDCDSKSYRSAL
C14 DESVYSLYSNIKTTSTQT-LEYGLNGDFNLT-LLQVPQIGGSSSGYRSAI
C15 DKNTQEVFAQVKQMYKTP-TIRDFGG-FNFSQIL----PDPLKPTKRSFI
C16 DKNTQEVFAQVKQMYKTP-TIRDFGG-FNFSQIL----PDPLKPTKRSFI
C17 DDFVRNLFESVKTPQTVP-LTTGFGGEFNLT-LLEPLSVSTGSSNARSAL
C18 DESVSNLFSNIKTQATQP-LDAGLTGDFNLT-LLQVPKVVTSQYSYRSAI
:. :. :*.: :: ** :
C1 EDLLYNKVTLADAGFMKQ-YADCL---GGINARDLICAQKFNGLTVLPPL
C2 EDLLFNKVTLADAGFMKQ-YGECL---GDISARDLICAQKFNGLTVLPPL
C3 EDLLFNKVTLADAGFMKQ-YGECL---GDISARDLICAQKFNGLTVLPPL
C4 EDLLFDKVVTSGLGTVDADYKECAS-RTANTVAEVGCVQYYNGIMVLPGV
C5 EDLLFDKVVTSGLGTVDADYKECAS-RTANWVAEVGCVQYYNGIMVLPGV
C6 SDLLYNKVKVADPGFMSS-YQKCIDSQWGGSVRDLICTQNFNGISVLPPI
C7 EDLLFNKVVTNGLGTVDQDYKQCIKDKGVGDVADVACAQYYNGVMVLPGV
C8 EDLLFDKVVTSGLGTVDQDYKQCVNEWGIGEVADLSCAQYYNGIMVLPGV
C9 EDLLFNKVVTNGLGTVDQDYKKCMKDKGFGEASDIACVQYYNGIMVLPGV
C10 EDLLFNKVVTNGLGTVDQDYKKCMKDKGFGEASDIACVQYYNGIMVLPGV
C11 SDLLYDKVKITDPGFMQS-YQKCIDSQWGGSVRDLLCTQTYNGIAVLPPI
C12 SDLLFSKVSVADPGFMQS-YQQCLDAQWGGNIRDLLCTQTFNGISVLPPI
C13 SDLLFNKVSVADPGFMQS-YQKCLDSQWGGNIRDLLCTQTFNGISVLPPI
C14 EDLLFDKVTIADPGYMQG-YDDCMK-QGPQSARDLICAQYVSGYKVLPPL
C15 EDLLYNKVTLADAGFMKQ-YADCL---GGINARDLICAQKFNGLTVLPPL
C16 EDLLYNKVTLADAGFMKQ-YADCL---GGINARDLICAQKFNGLTVLPPL
C17 EELLFDKVTIADPGYMQG-YDDCMQ-QGPASARDLICAQYVAGYKVLPPL
C18 EDLLFNKVTIADPGYMQG-YDECMK-QGPPSARDLICAQFVAGYKVLPPL
.:**:.** . * :. * .* :: *.* * *** :
C1 LTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C2 LTDEMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C3 LTDEMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C4 VDQSLLAQYSAALTGAMVLGGITAAAA----VPFSIAVQSRLNYLALQTD
C5 VDQSLLAQYSAALTGAMVLGGITAAAA----VPFSIAVQSRLNYLALQTD
C6 VSPAMQSLYTSLLVGAVASAGYTFGITSVGVIPFATQLQFRLNGLGVTTQ
C7 VDDTKMSLYTASLVGGMVLAGFTAGAA----IPFSLAVQARLNYVALQTD
C8 VDANMMTLYTASLTGAMVFGGITASAS----IPFSLAVQSRLNYVALQTD
C9 VDDSKMALYTAALTGGMLLAAFTAGAS----IPFSLAVQSRLNYVALQTD
C10 VDDSKMALYTAALTGGMLLAAFTAGAS----IPFSLAVQSRLNYVALQTD
C11 VSPAMQALYTSLLVGAVASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQ
C12 VSPSMQALYTTALVGGIAASGFTFGVSSAAVIPFATQLQFRLNGLGVTTN
C13 VSPSMQALYTTALVGGIAASGFTFGVSSAAVIPFATQLQFRLNGLGVTTN
C14 YDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQ
C15 LTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C16 LTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C17 MDVNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSIFYRLNGVGITQQ
C18 YDPNMESMYTTSLTGAILGAAWTAGASSFAAIPFAQSVFYRMNGIGITQQ
: *:: * .. .. * . :**: : *:* :.: :
C1 VLYENQKQIANQFNKAITQIQESLT--------------TTATALGKLQD
C2 VLYENQKQIANQFNKAISQIQESLT--------------TTSTALGKLQD
C3 VLYENQKQIANQFNKAISQIQESLT--------------TTSTALGKLQD
C4 VLQRNQQQLANSFNAAMGNITEAFGRVNDAIEQTSHAISTVAQALDKVQN
C5 VLQRNQQQLANSFNAAMGNITDAFGRVNDAIEQTSHAVSTVAQALNKVQT
C6 VLVQNQQLIANSFNNALTNIQKGFD--------------ATNLALSQMQS
C7 VLQRNQQILAESFNSALSNITEAFTEVNEAIKNTADAINTVATALGKVQS
C8 VLNRNQEILAQSFNSALGNITAAFSEVNHAFQETSDAINTVAQALGKVQT
C9 VLQKNQQILATSFNNAMSNITVAFTEVNQAIKETSDAINTVAKALGKVQS
C10 VLQKNQQILATSFNNAMSNITVAFTEVNQAIKETSDAINTVAKALGKVQS
C11 VLVENQKLIASSFNNALVNIQKGFT--------------ETSIALSKMQD
C12 VLMENQQLIANAFNKALVSIQEGFT--------------ATNQALNKIQT
C13 VLMENQQLIANAFNKALVSIQEGFT--------------ATNQALNKIQT
C14 VLSENQKLIANKFNQALGAMQTGFT--------------TSNQAFSKVQD
C15 VLYENQKQIANQFNKAITQIQESLT--------------TTATALGKLQD
C16 VLYENQKQIANQFNKAITQIQESLT--------------TTSTALGKLQD
C17 VLSENQKIIANKFNQALGAMQTGFT--------------TTNEAFQKVQD
C18 VLSENQKQIANKFNQALGAMQTGFT--------------TTNLAFAKVQE
** .**: :* ** *: : .: *: ::*
C1 VVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGR
C2 VVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGR
C3 VVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGR
C4 VVNDQGMALSQLTKQLASNFQAISSSIEDLYNRLDRVEADQQVDRLITGR
C5 VVNDQGMALSQLTKQLASNFQAISSSIEDLYNRLDRVEADQQVDRLITGR
C6 VINQHAQQLQTLVNQLGNSFGAISSSINEIFSRLDGLEANAQVDRIINGR
C7 VVNQQGEALAQLTKQLSSNFQAISSSIEDIYLRLDKLAADAQVDRLISGR
C8 VVNEQGQALSQLTRQLASNFQAISNSIEDIYNRLDGLTADAQVDRLITGR
C9 VVNEQGQALSQLTRQLASNFQAISSSIEDIYNRLDSLAADAQVDRLITGR
C10 VVNEQGQALSQLTRQLASNFQAISSSIEDIYNRLDSLAADAQVDRLITGR
C11 VINQHAAQLQTLVTQLGNSFGAISSSINEIFSRLEGLAANAEVDRLINGR
C12 VVNNNALQLQVLVQQLGNTFGAISASVNEIFSRLDLLEANAEVDRLISGR
C13 VVNNNALQLQVLVQQLGNTFGAISASVNEIFSRLDLLEANAEVDRLISGR
C14 AVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGR
C15 VVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGR
C16 VVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGR
C17 AVNTNAQALAKLASELSNTFGAISSSIGDIIQRLDVLEQEVQIDRLINGR
C18 AVNANAQALSKLASELSNTFGAISSSISDILKRLDAVEQEAQIDRLINGR
.:* :. * *. :*...* *** : :: **: : : ::**:*.**
C1 LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLM
C2 LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGRGYHLM
C3 LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGRGYHLM
C4 LAALNAFVAQQLTKYTDVRASRQLAQEKINECVKSQSFRYGFCGNGTHVF
C5 LAALNAFVAQQLTKYTDVRASRQLAQEKINECVKSQSFRYGFCGNGTHVF
C6 TVVLNTYVTQLLLKASEVRSQAALARQKISECVKAQSLRNDFCGNGTHVF
C7 LAGLNAFVTQTLTKYTEVRASRQLALQKVNECVKSQSSRYGFCGNGTHLF
C8 IGALNAFVAQTLTKYTEVRASRQLAIQKINECVKSQSARFGFCGNGTHLF
C9 LGALNAFVTQTLTRYTDARASRQLAIQKINECVKSQSMRYGFCGNGTHLF
C10 LGALNAFVTQTLTRYTDARASRQLAIQKINECVKSQSMRYGFCGNGTHLF
C11 MMVLNTYVTQLLLQASEAKAQNALAVQKISECVKAQSLRNDFCGNGTHVL
C12 MVVLNTYVTQLLIQASELRSQAELAKQKMSECVKSQSLRNDFCGNGTHVL
C13 MVVLNTYVTQLLIQASELRSQAELAKQKMSECVKAQSTRNDFCGNGTHVF
C14 LTSLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIV
C15 LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLM
C16 LQSLQTYVTQQLIRAAEIRTSANLAATKMSECVLGQSKRVDFCGKGYHLM
C17 LTTLNAFVAQQLVRSESAARSAQLAKDKVNECVKSQSTRSGFCGQGTHIV
C18 LTSLNAFVAQQLVRSETAARSSQLAVDKVNECVKSQSKRNGFCGSGNHIV
*:::*:* * : . ** *:.*** .** * .*** * *:.
C1 SFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHEGK---AYFPREGVFVS
C2 SFPQAAPHGVVFLHVTYVPSQEKNFTTAPAICHEGK---AYFPREGVFVS
C3 SFPQAAPHGVVFLHVTYVPSQEKNFTTAPAICHEGK---AYFPREGVFVS
C4 SVVNAAPDGMMFFHSVLLPTAYMEVAAFSGLCVEGK-GFVLREVGNVLFE
C5 SVVNAAPDGMMFFHSVLLPTAYMEVAAFSGLCVEGK-GFVLREVGNVLFE
C6 SVPQLAPNGVMFIHYTYQPTAYALVQTAAGLCYNGT---GYAPLSGMFVL
C7 SVVNAAPNGIMFFHTVLIPSSYTTVQAWAGVCVNGDVGLILRDVRNTLFY
C8 SIANAAPNGIMLFHTVLLPSEYTTVQAWAGICIDNNVGLILRDFKTTLFF
C9 SIANAAPNGVMLFHTVLIPTEFVTVEAWSGVCVDGTHGLILRDVRTTLFQ
C10 SIANAAPNGVMLFHTVLIPTEFVTVEAWSGVCVDGTHGLILRDVRTTLFQ
C11 SIPQLAPNGVLFIHYAYTPTDYALVQTSAGLCYNGT---GYAPLRGMFVL
C12 SIPQLAPNGMLFIHYSYQPTKYAQVYTTAGLCFNGT---GFVPRDGLFVR
C13 TIPQLAPNGMLFIHYSYQPTNYVQVYTTAGLCFNGT---GFVPRDGLFVR
C14 SFVANAPNGFYFFHVGYVPTNFTNVTAAYGLCNNNNPLLCIAPIDGYFIT
C15 SFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHEGK---AYFPREGVFVS
C16 SFPQSAPHGVVFLHVTYVPSQERNFTTAPAICHEGK---AYFPREGVFVS
C17 SFVINAPNGLYFMHVGYHPSQHIEVVAAYGLCDAANPTNCIAPVNGYFIK
C18 SFVSNAPNGLYFFHVGYVPTAHINATAAYGLCNTELPPRCIAPIDGYFVT
:. **.*. ::* *: : .:* :.
C1 NGS-------SWFITQRNFYSPQIITTDNTFVAGSCDVVIGIINNTVYDP
C2 NGT-------SWFITQRNFYSPQIITTDNTFVAGNCDVVIGIINNTVYDP
C3 NGT-------SWFITQRNFYSPQIITTDNTFVAGNCDVVIGIINNTVYDP
C4 KDG-------RYFITARRMFEPRIPQTADFVQISGCDVVYLNVTRDELPT
C5 KDG-------SYLITARKMFEPRVPQTADFVQISGCDVVYLNVTRDELPT
C6 PND-TN----LWHYTKMNFYNPVNITFENTQVLDSCAVNYSYVNYSVIEP
C7 LDS-------KYYITTRDMYQPRTPVQSDFVRISNCSVSYVNITSEQLGD
C8 SD--------KYYVTPRDMFEPRTPVQADFVRIANCSVNYLNISSSELGT
C9 QGS-------TYYVTTRDMFEPRTPVAADFVRIANCSVTYVNITADSLGE
C10 QGS-------TYYVTTRDMFEPRTPVAADFVRIANCSVTYVNITADSLGE
C11 PNN-TN----MWHFTSMQFYNPVNISYSNTQILTSCSINYTSVNYSVLQP
C12 ENNESQ----VWYFTKASFYNPVNLSYENTHLLDTCGVNYTTVNNSVLNP
C13 ENNASQ----LWYFTKASFYNPVNLSYENTRLLDTCGVNYTTVNNTVLNP
C14 NQTTTYSIDTEWYYTGSSFFKPEPITQVNSRYVSS-DVKFEKLENNLPPP
C15 NGS-------SWFITQRNFYSPQIITTDNTFVAGSCDVVIGIINNTVYDP
C16 NGS-------SWFITQRNFYSPQIITTDNTFVAGSCDVVIGIINNTVYDP
C17 NQT-TRGVD-DWSYTGSSFYAPEPITTLNTRYVAP-QVTFQNISTNLPPP
C18 NSSATRDADPEWYYTGSAFYNPEPITLANTRYVSK-DTKYQELNNKLPPP
: * :: * : :
C1 LQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVDIQKEID----
C2 LQPEL--DSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEID----
C3 LQPEL--DSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEID----
C4 IIPDY--VDVNGTVEDILSKLPNRTSPELDLDIFNATYLNLTSEIADLTA
C5 IIPDY--VDVNGTVEDILSKLPNRTSPEFNLDIFNATYLNLTSEIADLTA
C6 TPPSS--YNFTEEFNKWYKNHSSYFNNTFNPGDFNFTGVNISEQLA----
C7 IIPDY--LDVNKTLNDLQQSRPNYTVPDLGLDQYNTTILNLTSEIAMLQN
C8 IIPDY--IDVNKTLEELEQQRPNYTLPELDIDRFNNTYLNLSAEIAELQR
C9 IIPDY--IDVNKTLEEL--GRPNFTLPDFNLDQFNNTYLNLSAEIALLNA
C10 IIPDY--IDVNKTLEEL--GRPNFTLPDFNLDQFNNTYLNLSAEIALLNA
C11 SAPSD--YDFQKEFDKFYKNLSTSFNNTFNPNDFNFSMVDVTAQIS----
C12 IEPPN--YNFQEEFDKYFKNQSSQFNITFDSSQFNVSIVNLNEQMA----
C13 IEPPN--YDFQEEFDKYFKNQSSHFNITFDSSQFNVSIVNLNEQMA----
C14 LLENSTDVDFKDELEEFFKNVTSHGPNFAEISKINTTLLDLSDEMA----
C15 LQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVDIQKEID----
C16 LQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVDIQKEID----
C17 LLGNSTGTDFKDELDEFFKNVSTSIPNFGALTQINTTLLDLSDEML----
C18 LLSNQTDESFRDELEEFFKNVSSQGPNFQEISKINATLLDLSDEMK----
.. .:. .. * : ::: ::
C1 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C2 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C3 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C4 RSESLKNTTLELKELIANINATLVDLEWLNRVETYIKWPWWVWLIIVLVL
C5 RSESLKNTTLELKELIANINATLVDLEWLNRVETYIKWPWWVWLIIVLVL
C6 ----------TLTDVVNQLNKSFIDLKQMNVYEQTIKWPWYVWLAMIAGL
C7 KSDSLIESTVKLHKLIEQLNQTYVDLEWLNRLESYVKWPWWVWLAILLAL
C8 KSESLQNSTIQLQELIERINSSYVDLELLKRIETYVKWPWYVWLAIILVM
C9 KSESLYNTTQRLEKSIENINNSYIDLELLNRLESYVKWPWYVWLAIFLAL
C10 KSESLYNTTQRLEKLIENINNSYIDLELLNRLESYVKWPWYVWLAIFLAL
C11 ----------SLHQVVDQLNQSFIDLKKLNVYEKTIKWPWYIWLAMIAGI
C12 ----------ALDSVVKSLNESFIDLKKLGVYTQQPNTPWYAWLGMIAGL
C13 ----------ALDSVVKSLNESFIDLKKLGVYTQTIKWPWYAWLGMIAGL
C14 ----------ILQEVVKQLNDSYIDLKELGNYTYYNKWPWYIWLGFIAGL
C15 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C16 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C17 ----------ALQQVVKALNESYIDLKELGNYTYYNKWPWYIWLGFIAGL
C18 ----------VLNEVVKQLNESYIDLKELGNYTYYQKWPWYVWLGFIAGL
* . :* : :**: : : **: ** :. :
C1 VGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLH
C2 IAIVMATILLCCMTSCCSCLKGAC-SCGSCC-KFDE-DDSEPVLKGVKLH
C3 IAIVMATILLCCMTSCCSCLKGAC-SCGSCC-KFDE-DDSEPVLKGVKLH
C4 ILFTCLMLFCCCSTGCCGIFSCLASSCGACCDIRGTKLQRYEAIE--KVH
C5 ILFTCLMLFCCCSTGCCGIFSCLASSCGACCDIRGTKLQRYEAFE--KVH
C6 VGLVLAVIMLLCMTNCCSCFKGLC-SCRHC--SYDEIEDVYPAVRVHNKR
C7 IFTSFILLYCCCSTGCCGCTSCLA----DCRGQRLQ------RYEVEKVH
C8 SLFSFLMLYCCCMTGCCGCCSCLTSCCFDCRGKRLQ------QYEVEKVH
C9 ILFSFLMLYCCMATGCCGCCSCLSNSCFDCGGRRLQ------RYEVEKVH
C10 ILFSFLMLYCCMATGCCGCCSCLSNSCFDCGGRRLQ------RYEVEKVH
C11 VGLVLAVIMLMCMTNCCSCFKGMC-DCRRCCGSYDSYDDVYPAVRVNKKR
C12 VGLALAVFMLCCMTNCCSGFRGIC-SCKQC--QYDDYADVYPAVRVSGKR
C13 VGLALAVFMLCCMTNCCSGFRGIC-SCRQC--QYDDYADVYPAVRVSGKR
C14 VALLLCVFFLLCCTGCGTSCLGKM-KCRNCCDSYED-------FDVEKIH
C15 VGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLH
C16 VGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLH
C17 LALALCVFFILCCTGCGTSCLGKL-KCNRCCDKYEEYD-----LEPHKIH
C18 VALALCVFFLLCCTGCGTNCMGKF-KCNRCCDSYDDYE-----VEPHKIH
: *.* * :
C1 YT
C2 YT
C3 YT
C4 VQ
C5 VQ
C6 TE
C7 IQ
C8 IQ
C9 IQ
C10 IQ
C11 TV
C12 TV
C13 TV
C14 VH
C15 YT
C16 YT
C17 IH
C18 VH
-- Starting log on Thu Oct 27 00:04:30 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=1.12 sec, SCORE=826, Nseq=18, Len=1552
C1 ---MFIVFLISYTTFLIPY-------------TATTTCFSGPTTENK-LN
C2 -----MLILFVFLPFITAD-----------------TCLNFTNLAAPAYN
C3 -----MLILFVFLPFITAD-----------------TCLNFTNLAAPAYN
C4 MLRNKKFLSLFVFSVVLPCAY-----------SNTGTCSNTINRFMY-LK
C5 MLRNKKFLSLFVFSVVLPCAY-----------SNTGTCSSTINRFMY-LK
C6 ----MWAILLILPAVLA------RPSCI-KS-SVSLSSIEHNVTYQS-FV
C7 -MILSLLLLVIAVCVNNNYAWLGLQRNAIPPSNQDGECGGDPGKLPN-LN
C8 ----MLFLAVYAAELLVLITQIPAVFSYG---GERFTCSPNYASLPN-LN
C9 ----MLSLAVYFAELLVIISYLPDLVT-----GDLNGCADGHNRLPN-LN
C10 ----MLSLAIYIAEILAFLQ-LPDLTTGAP--NKDGDCGDGYNRLPN-LN
C11 ----MLLTVVLSLALIACDASATRPECFANS-NFQLYPRNHTVNITS-LS
C12 ----MVVLLFVMFSLVVAD----RPNCYLP--QYSYTISPATITNTSYFN
C13 ----MVVLLFAILSIALAD----RPLCTINTGNYVLNPIQANITYTVVNS
C14 ----MTRLMCLLMSLLIFVRGCEAQFVDMSPASNNSECLDSQVDAAAFSK
C15 ---MFIVFLISYTTFLIPY-------------TATTTCFSGPTIENK-LN
C16 ----MKILIFAFLVTLV---------------KAQEGCGVINLKTQPTLT
C17 -MTYSVSLLMCLLTFIGAN----AKIVSIPGGVGTGACPQVDMQPSYFIK
C18 ----MTHLMFLLMFLLTPI----RGDVDLGPDSTRDTCDEVVVQVSA-FQ
C1 IS-------SGSRGVY-YPDDIFR---------S-NVSVLVTGRFLRFNT
C2 IA------SSSRRGVY-YPDDIFR---------S-DFLHLVNDYFLPFGS
C3 IA------SSSRRGVY-YPDDIFR---------S-DFLHLVNDYFLPFGS
C4 LGLPESVNDAYVSGYLPVRDNWTCS------AGF-WQYYNAHAIFMSYYS
C5 LGLPESVNDAYVSGYLPVRDNWTCS------AGF-WQYYNAHAIFMSYYS
C6 LS---------KVSCL-LPDPFIA----------YSGQTLKQSIYYADTT
C7 LGLPPN-KTVFVSGYLPLHKGWVCPTHPLGGGGYGTTFNDIHAIYWSYHS
C8 LGLPPN-STVLVSGYLPRPGDWVC------YTGT-TTHDNIRGVFWSYYS
C9 LGLPPN-STVFVSGYLPRKNGWECPTINNQYGGS-TNYENVHGIFWSYHS
C10 LGLPPN-STVFVSGYLPQKTGWVCP--ENKEAGA-TSYEGVHGVFWSYYA
C11 VN---------VANLL-LPDPYIA----------YSGQTLRQNLFMADLS
C12 VN---------PISIV-VPEFSVA----------RTNLVVRQRLQVAAYD
C13 IN---------PVSLV-VPEFSIA----------RTNLVVRQRLYVA-AT
C14 LMWPYPIDPSKVDGII-YPVGRTY----------SNITLSYTGLFPLQGD
C15 IS-------SGSRGVY-YPDDIFR---------S-NVSVLVTGRFLRFNT
C16 QV------SSSRRGVY-YNDDIFR---------S-DVLHLTQDYFLPFHS
C17 HNWPEPIDMNKADGVI-YPNGRTY----------SNITLQTTNLFPRNGD
C18 KDWPQPINPLFADGII-YPTGRSY----------SNISLSYQGLFPRQGD
.
C1 TLTWYN------S---WN----------QAYSSPVLPFGHG--VYFST--
C2 NVTQFY------T---QG----------TNIDNPTLPFRDG--VYFAA--
C3 NVTQFY------T---QG----------TNIDNPTLPFRDG--VYFAA--
C4 TAMDFAIGVGSSKSYN------------TKWGLYFWQKNNGYRAVFRICK
C5 TAMDFAIGVGSSKSYN------------TKWGLYFWQKNNGYRAVFRICK
C6 NVTVYPVTPYKKD--SKA----------TMYNTTQVLVGNG--LFVHTYM
C7 TANAVELAVSSGNGSVTR----------D-WSLYVHHSNNQGYMYFKICR
C8 HGSAVAIGISNKDQTTTP----------DQWALFAHHSNNGGQFYLRICK
C9 TAQRFELGVSNKDQLVNT----------NRWALYVYQNNNEGVLKLRICK
C10 TGQDVEIGVSNFRQLNNT----------NRWALYVHQKNNDHVLHFRICK
C11 RTIIYPITPPAKDS-TGG----------YIYNTTILPVASG--LFVHTWM
C12 -FTKIPITPPHRS----------------IFNNTYFRVGDG--ILVNTHM
C13 NFTRIPITPPGRA---------------VIFNNTYFDAEDG--FFVNTHM
C14 LGTQYLYSVSHAVGHDGDPTTAYI----SNYSLLVNAFDNGFVVRIGAAA
C15 TLTWYN------S---WN----------QAYSSPVLPFGHG--VYFST--
C16 NLTQYFSLNIESD---KI----------VYFDNPILKFGDG--VYFAA--
C17 LGTQYVYSASNEKSRTSNVAFI------SNYSYYGNPFGDGIVIRIGQNS
C18 LGRQYIYSVTHAGDSTLYPPQGIGKHFISNYSAETLPFGNGFVVRIGFSA
.
C1 IDKSNVVRGW--------------IFGTTLDNTTQSA---------LLV-
C2 TEKSNIVRGW--------------IFGSTLDSTSQSA---------IIL-
C3 TEKSNIVRGW--------------IFGSTLDSTSQSA---------IIL-
C4 W-DSKIEPSFQPSNQQARECLINKEFYMGFGHAKNQIFGVSWSGNRVTLH
C5 W-DSKIEPSFKPSNQQARECLINKEFYMGFGHALNQIFGVSWSGNRVTLH
C6 YREQDSSTY--------CQEPFGVVFGTTFEQDRIAI---------IMIV
C7 W-GAVYPLNLSPNHNRG-DCLVNRKFNFRFLHGANQVLGVTWSSNYVTLY
C8 WLNGG-NLDWATESSRG-LCIVNRKFRFQFSHAAGQVIGVTWSSNVVTFY
C9 WLRGQYSLQWLHGARHG-QCAVDRAFNFRFVHAENQVLGVTWSSNYVTFY
C10 WLAGTYTPQSRPWSRYG-QCAVDKRISFTFEHQGNQVLGVTWSSNYVTFY
C11 YRQESTSRTY-------CQEPFGVAFGDTFIQDRIAI---------VIIA
C12 YHRTNIATNLG-SSFYGCQEPFGAAFGNTFVNEPITL---------VMFY
C13 YHTNNIATSPNKPNFYGCQEPFGVAFGNTFENEPITL---------VMVY
C14 NSTGTIVISPSVQTKIKKAYP-AFILGSSLTNTSAGL--PLYANYSLTII
C15 IDKSNVVRGW--------------IFGTTLDNTTQSA---------LLV-
C16 TEKSNVIRGW--------------VFGSTFDNTTQSA---------IIV-
C17 NKTGSVIVGTAQTTIKKIYPA--LMLGSSFGNFSVNNKSGAYFNHTLLIL
C18 NKTGSLVISPTTSKVIKKIYP-AFMLGTAVTSFAHGH-AGRYLNHTLVIL
: . : .
C1 ------------NNGSAITIEVC-YFQFCDNPAFIISGGAQTN-TAIYIN
C2 ------------NNSTNLIVRVC-NFELCKVPLFVVFKSNNSQLSHLFSD
C3 ------------NNSTNLIVRVC-NFELCKVPLFVVFKSNNSQLSHLFSD
C4 TLDKVVSFFVEGADAWDYASYRCANGYSCA--HQVVYTPVTLRITTVPEG
C5 TLDKVVSFFVEGADTWDYASYRCANGYSCA--HQVVYTPVTLRITTVPQG
C6 PGNLGSWPTVSKPTTIKVYIIVGSNATICAYPAFNRWGPAG---QFYADD
C7 GLNNTYRFYL--HNNWERATVRCHTKQSCA--FFPVENVTTLNITTNGEG
C8 G-SRSYRYYL--TNNWNRVDVKCVNYPTCI--INPVRNITTFNVTTNAQG
C9 GINGSYRYYI--PNDWFRVSVKCENKYVCA--IYPVYNQTTLNITTNAKG
C10 GISKSYRYFL--KNDWYRVTVKCLNKYACA--LYPVYNQTTLNITTNARG
C11 PDNLGSWNQVSYRNVTTVHLVVCSNATLCINPGFNRWGPAG---NIIASN
C12 AGNVGSWSSLVTQQQANITIVSCDNATLCANPFFLRWGPGVIR-SFTISN
C13 AGNIGSWTNTVTQTSANITIVSCDNATLCSNPLYLRWGPGGLP-GYVIKD
C14 PDGCGTVLHAFYCILQPRTQNRCPGNGGYK--AYFVYETIHNDCVPAINK
C15 ------------NNGSAITIEVC-YFQFCDNPAFIISGGAQTN-TAIYIN
C16 ------------NNSTHIIIRVC-YFNLCKDPMYTVSAGTQVS-SWVYQS
C17 PSKCGTVFQVAYCLLQPRTDSYCPGNANYV--SYALIDSPT-DCTSADES
C18 PESCGTSLTVFYCILEPRNGTRCPNHQDYT--SYVIWETPHLDCGSSVNR
C1 LRN--CTYVDTLRDLPL-SFAEVDGGFKHLREFVFKNSDGFLHIYGAYQ-
C2 SFN--CTFEYVSRAFSL-DIREQSGNFVDLREFVFRNRNGFLHIYEGYE-
C3 SFN--CTFEYVSRAFSL-DIREQSGNFVDLREFVFRNRNGFLHIYEGYE-
C4 IRS-YDLCTNCSGFPEH-VFAVLDGGEIPP-NFDFTN---WFYLTNASS-
C5 IRS-YDLCTNCSGFPEH-VFAVLDGGEIPP-NFDFTN---WFYLTNASS-
C6 AFV--NHGDSCFVNNTF-EIPLNTSRI----NLAFRFNDGNLLLYHSRW-
C7 LIESYDVCADCGGFPVH-VFPVLEHGYIPN-DFSFSN---WFMLSNTST-
C8 LFQSYTVCDDCNGFPQH-VFAVLDGGYIPS-EFGLDN---WYVLSNTST-
C9 LIKEYSVCESCNGFPAH-VFPVLEGGKIPA-DFDFTN---WFYLSNTST-
C10 LIQSYSVCDSCNGFPAH-VFPVLEGGKIPA-DFDFTN---WFYLTNSST-
C11 ALV--DHSNSCFVNNSF-NVSISTSRI----NLAFLFKDGDLLIYHSNW-
C12 AFQ--CHGNYTFYDTKLVNFTVSTARY----NLAFTFADGDIFMY--YA-
C13 AFH--CHGDYTFYDSKIINFSVDSSRY----NFAFSFADGDIFMY--YA-
C14 --N------ASLNSFKT-FFDLVNCTFFDSWDITADEVKEWFGITQDTQG
C15 LRN--CTYVDTLRDLPL-SFEDVDGGFKHLREFVFKNSDGFLHIYGAYQ-
C16 AFN--CTYDRVKKSFQL-DTSPKTGNFTDLREFVFKNRDGFFTVYQTYT-
C17 KRR------NGLEDIKK-YFNLVNCTYFEEFNVTADERAEWFGITQDSQG
C18 --N------ATLNSFKV-SFNLRQCKFMRTYNISDDENQEWFGITQNAQG
:. :
C1 --PHDLDIGAPAALPAQFLPLKPLWKLPLGLNITNYKVV----TTLKP--
C2 --AISIVRGLPAGFNV----LKPLLKIPFGLNVTSFKTF----LTVYR--
C3 --AISIVRGLPAGFNV----LKPLLKIPFGLNVTSFKTF----LTVYR--
C4 --PVSGRVVGVQPLQ-----LLCLWPIPALLGTATDITFDRNGTSDVRCN
C5 --PVSGRVVGVQPLQ-----LLCLWPIPALLGTATDITFDRNGTSDVRCN
C6 --LPTSGLNLLEDTP-----LHFYMSVGVGANLPNAQFF----QSLSR--
C7 --FLQGKLVSTQPLK-----LMCLWPVPSLLANDEKIFFN---ASGATCN
C8 --VLDGRVLTNQPLL-----VACLWPVPSLLSNDNPIHFNMSLNTGVNCN
C9 --LVAGRVVGIQPLR-----LLCLWPVPSTTANDDKIYFN---TTGANCN
C10 --LVAGRVVGIQPLK-----LLCLWPVPSITANDDKIYFN---TTGANCN
C11 --LPKGSFDFNQSFP-----LQYFMTLPVGGNLPRAQFF----QSIVRQG
C12 --ALGDSLNLPTAYP-----LQPYLRIPAGFKPDVVQFF----QAITRP-
C13 --PLGDSQNVAKAFP-----LQPYLRIPAGFKPKRAQFF----QAIIRK-
C14 VHLYSSRKGDLYGGN-----MFRFATLPV---YDAIKYY----TVIPR--
C15 --PYDLAIGATAALPAQFLPLKPLWKLPLGLNITNYKVV----TTLKP--
C16 --PVNLLRGLPSGLSV----LKPILKLPFGINITSFRVV----MAMFS--
C17 VHLYTSRKNGFNSNN-----LFLFASVPI---YDKINYY----TVIPR--
C18 VHLYSSRKGDLYGGN-----MFLFDTLPV---YETLKYY----TVIPR--
: :
C1 --------TNQAFQAAYIVGNLKHTTMMLSFNENG-----TMSNAID---
C2 ----VAAGSISVASSAYFVGYLKPLTFMLSYDLNG-----TINNAVD---
C3 ----VAAGSISVASSAYFVGYLKPLTFMLSYDLNG-----TINNAVD---
C4 GFSSNATADAMRFSLNFTENGVFAKEGVITLKTVSNTFKFSCSNSSTYTS
C5 GFSSNATADAMRFSLNFTENGVFAKEGVITLKTVSNTFKFSCSNSSTYTR
C6 SLDGSGDGKCFSAQNNLYIAPIVQRELLVAYSDAG-----IPTKVAD---
C7 GYQFDGVADAIRFSLNFSSDQVFNGVNNIVFDVEGGTFEFFCTNDTSVNP
C8 GYSEVREVSHLRFALNFTNQQVLNGVHNIDLLGDTFNFTFTCTNNSDITK
C9 GFVGEGVADALRFSLNFTSNQVLNGVHNIILESTSSKFTFTCRNDSESTF
C10 GFVGEGVADALRFSLNFTANQILNGVHNIILEGTEAKFTFTCRNDSESTL
C11 GTNNGADDRCVDFNISLHIAHLVNRDLLVSYFNNG-----SVANAAD---
C12 -NGESAEVACASSTVSWYVSRLYYKELLVGYDSYS-----SIVNVSF---
C13 -TAEDAEFQCSRYTTSWYVSYLKYHELLVGYDANS-----IISNVST---
C14 --SFRAKANRRESWAAFYVYKLHQLTYLLDFSVDG-----YIRRTID---
C15 --------TNQAFQAAYIVGNLKHTTMMLSFNENG-----TMSNAID---
C16 ----KTTSNYVPESAAYYVGNLKQSTFMLSFNQNG-----TIVDAVD---
C17 --SIITPANQRSAWAAFYVYPLHQLSYLLNFDVNG-----YITQAAD---
C18 --SLRSRLNERQAWAAFYVYSLHKLTYLLDFSVDG-----YVRRAID---
: :
C1 ----CSQDPLAELKCTLKQF---DVGKGIYQTSNFRVQPTVDVARFPNIT
C2 ----CSQDPLAELKCTIKNF---NVSKGIYQTSNFRVSPTREVVRFPNIT
C3 ----CSQDPLAELKCTIKNF---NVSKGIYQTSNFRVSPTREVVRFPNIT
C4 PY-VIPFGHIDQPYYCFTTFYINETTGTTATSFVGMLPPIVREFVITRLG
C5 PY-VIPFGHIDQPYYCFTTFFTNETTGATATSFVGMLPPIVREFVITRLG
C6 ----CSLNAGEELFCVTGTF---DPPTGVYPLSRYRAQLS-GSVHITQQL
C7 TYRYVPFGQLTEIYRCFVET---TAENGTHTTFVGILPPVVREIVVSRLG
C8 GERFVPFGFLDNVYRCFVYF---DVGNGTVNKFVGILPPVVKEIVISKFG
C9 YR--VPFGETGQVYYCFIFT---EAGNQSYNTFVGILPPVLKEIVISRYG
C10 FR--VPFGVTGQVYYCFVFT---ESRNQSYNTFVGILPPILKEIVISRYG
C11 ----CAESASEELYCVTGSF---QPPTGVYPLSRYRAQVD-GFVRVTQRG
C12 ----CSSDAESELQCLLGTF---APANGVYSLSNFRSSPT-DNVRITNSA
C13 ----CSFDAESELQCLLGTF---TPANGVYSLSNFRSSPV-DTVRITNSA
C14 ----CGHDDLSQLHCSYTSF---EVDTGVYSVSSYEASAT-GTFIEQPNA
C15 ----CSQDPLAELKCTLKQF---DVGKGIYQTSNFRVQPTVDVARFPNIT
C16 ----CSQDPLAELKCTTKSF---NVSKGIYQTSNFRVSPVTEVVRFPNIT
C17 ----CGYNDYTQLVCSYGDF---NMKSGVYSTSYYSAKPV-GAYYEAHVY
C18 ----CGYDDVAQLFCSYESF---DVDSGVYSVSSFEAQPR-GYFVEQPHS
. :
C1 NVC--PFDKVFNATRFPSVYAWERTKISD-----------------CVAD
C2 NRC--PFDSIFNASRFPSVYAWERTKISD-----------------CVAD
C3 NRC--PFDSIFNASRFPSVYAWERTKISD-----------------CVAD
C4 DVYLNGYRIFSVGEVVSVNFNISSTDHRDFWTVAFVKDAEVMLDIEDTYI
C5 DVYLNGYRIFSVGEVVSVNFNISSTDHRDFWTVAFVKNAEVMLDIEDTYI
C6 SHCALPYKDILDPPQ-PVV--WKRYTVAN-----------------CSFD
C7 AIYINGYRLISLPVIESIVFNVTSKVGSDFWTVAFAQDVEVLLELNATNI
C8 TVYINGVNMATLPPVNSVIFNVTSTVGSDFWTVGFTDLADVMIDINATRI
C9 SIYLNGVKLFSLPTLESVIFNVSSNVGSDFWTIAYAQDAQVMVDLNATSI
C10 SIYLNGVKLFSLPVLQSVIFNVSSKVGSDFWTVAYAQDAQVMVDLNATSI
C11 DYCQPPYADLLEPPQ-PVV--WRRFMLYN-----------------CAFD
C12 SSCSVPYSVLSRPPL-PFV--WKRYAISN-----------------CKFD
C13 KACSVPYNLLETPPL-PFV--WKRHSISN-----------------CKFD
C14 TEC--DFSPMLKGVA-PQVYNFKRLVFSN-----------------CNYN
C15 NVC--PFDKVFNATRFPSVYAWERTKISD-----------------CVAD
C16 NLC--PFDKVFNATRFPSVYAWERTKISD-----------------CVAD
C17 PDC--NFTDLFRENA-PTIMQYKRQVFTR-----------------CNYN
C18 SEC--DFSAMFSSQP-PQVYNFSRLVFTN-----------------CNYN
.
C1 YTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C2 YTVLYNSTSFSTFKCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C3 YTVLYNSTSFSTFKCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C4 KQLLYCNNPVNVVKCQQLK-FVLEDGFYSYVPASEDSLPRTIVRLPRFMT
C5 KQLLYCNNPVNVVKCQQLK-FVLEDGFYSYAPQSEDSLPRTIVRLPRFMT
C6 FDVIVNNLPTYELKCYGVAPTRLAQMCYSGVTLDVMRINST------HFT
C7 VDILYCESPINKLKCQQLT-FSLDDGFYPASSAYTEYTPRSYVALPYHAT
C8 VDLLYCDTPINKLKCQQLS-FSLDDGFYTTTNVYKQAVPRTYVALPYHAT
C9 TDLLYCDTPLNRLKCQQLS-YALEDGFYPTTNIYTKDIPRSYVALPYHAT
C10 TDLLYCDTPLNRLKCQQLS-YALEDGFYPTTNIYTRDIPRSYVALPYHAT
C11 FSVVIDNLPTHQLQCYGISPKRLASMCYSSVTIDVMRINAT------HLN
C12 FQALLSHLPTFQLRCFGISPTKLATMCFGTVTLDIMLVNVT------HYN
C13 FQALLSHLPSFQLRCYGISPTKLSSMCFGTVSLDVMLVNVT------HYN
C14 LTKLLSLFAVDEFSCNGISPDAIARGCYSTLTVDYFAYPLS------MKS
C15 YTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C16 YTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C17 LTLLLSLVQVDEFVCDKITPEALATGCYSSLTVDWFAFPYA------WKS
C18 LTRLLSLFQVSEFSCHQVSPSALASGCYSSLTVDYFAYPLS------MAS
. . * : : : :
C1 QVAPGQTGVIADY-----------------------NYKLPDD---FIG-
C2 QVAPGETGVIADY-----------------------NYRLPDD---FTG-
C3 QVAPGETGVIADY-----------------------NYRLPDD---FTG-
C4 HNFINVSVVVSFYFDDGKHDTPVGSDFYECATCAPKYYHVRFTDYWLDG-
C5 HQHINISVVVSFYFDDGQADTPVGSDFYACATCAPKYYKMVFADVDWTGI
C6 NMLGNVPDVFSMY-----------------------NYVLPTD---FYG-
C7 HTEVVLGVHLSLY-----------------------TKHSATL---NGG-
C8 HSAINITAEVSVN-----------------------SNDDRFL---INGL
C9 HAVLNITAYIGD------------------------KKDDRIQ---INGF
C10 HMVLNITAYIGD------------------------KKDDRIQ---INGF
C11 NLLNRVPDSFSLY-----------------------NYAVPDN---FYG-
C12 NLLNDVPDDFSLY-----------------------NYQLPRN---FYG-
C13 NLLNDVPDDFSLY-----------------------NYQLPRN---FYG-
C14 YIRPGSAGNIPLY-----------------------NYKQSFA---NPT-
C15 QVAPGQTGVIADY-----------------------NYKLPDD---FIG-
C16 QVAPGQTGVIADY-----------------------NYKLPDD---FTG-
C17 YLAIGSADRIVRF-----------------------NYNQDYS---NPS-
C18 YLRQGSTGPIAQF-----------------------NYKQDFT---NPT-
.
C1 ----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFE
C2 ----------CVIAWNTANQ------DVGSYFYRSHRSTKLK-----PFE
C3 ----------CVIAWNTANQ------DVGSYFYRSHRSTKLK-----PFE
C4 ----SNHTNVCVNTASFTTRLFTDYFGT-SGAVRIEIEPGTC-----PFG
C5 HGDILNVTGVCVNAASFTTKFRSSYLGADGVYVG--LEAGSC-----PFS
C6 ----------CVHAYYINST-NKRYTVAYQRGYSKVITPGGR-----QPY
C7 ------NDTICVNTTQFTTVLNAS---VYTG-ARGDVVNVNC-----PFT
C8 ------NGTFCVNTTQFTV--ITHFTQYTG--MRVAIENLDC-----PFT
C9 ------NDSFCVNTTQFTTN----FVQTDSGIIKAELKNGDC-----PFT
C10 ------NDSFCVNTTQFTTN----FVQTDSGIIKAELKNGDC-----PFT
C11 ----------CLHAFYLNST-T-----AYAVANRFPIKPGGR-----QSN
C12 ----------CLHSYYLPND-T-----AFSYTVASRIRYPSW-----VHS
C13 ----------CLHSYYLPNS-T-----TFNYIVASRSQSPSW-----VYN
C14 ----------CRVMASVPANVTITKPEAYGYISKCSRLTGDYQHIETPLY
C15 ----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFE
C16 ----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFE
C17 ----------CRIHSKVNSSVGISYSGLYSYITNCNYGGFNKDDVVKPGG
C18 ----------CRILAAVPSNVTIPLPQSYMWLTQCYTNSPSN-----SHY
*
C1 RDLSSEENGVLTLST----YDFNQNVPL---------E-YQATRVV----
C2 RDLSSDENGVRTLST----YDFNPYVPL---------D-YQATRVV----
C3 RDLSSDENGVRTLST----YDFNPYVPL---------D-YQATRVV----
C4 FD---TLNNYLAFGS----LCFSTV-P----------NGGCTMNIVTQGP
C5 FD---TLNNYLTFGS----LCFSTV-P----------NGGCTMNVVSKGP
C6 ND---YVRTLLNTPNE---IC------T---------R-ANCFGLV----
C7 WA---SLNDYLSFGT----ICFSFE-PL---------PGGCTMSIN-VVN
C8 LD---SLNNFLSFGS----ICFSTY-AV---------GGGCRMRLD-KVL
C9 FD---SINNYLTFDS----ICFSIE-PI---------GGGCTMNIV-RTW
C10 FD---SINNYLTFDS----ICFSIE-PI---------GGGCTMNIV-RTW
C11 RD---YIATVLNAAH----YT------T---------F-SYIFGLA----
C12 ITPGGRQPVGPFLDS----LQSSSK-PC---------T-GSCLGLA----
C13 ISPGGRQPPSSFLNT----LPGSAK-PC---------Q-GSCLGLA----
C14 INPG-EYSICRDFAP----WGFSEDGQVFKRTLTQFEGGGLLVGVGTRVP
C15 RDLSSEENGVLTLST----YDFNQNVPL---------E-YQATRVV----
C16 RDLSSEENGVRTLST----YDFNQYVPL---------E-YQATRVV----
C17 RASQPCVTGALNSPTNGQVWSFNFGGVP-----------YRTSRLTYTDH
C18 VEAG-SYTPCLGLAS----RGFNTFNSM---------HYDPATGLTATGS
:
C1 -------------VLSFELLNAPATVC---------GPKLSTPLVK--NQ
C2 -------------VLSFELLNAPATVC---------GPKLSTELVK--NQ
C3 -------------VLSFELLNAPATVC---------GPKLSTELVK--NQ
C4 YGQ----PHTFA-VLYVSYTDGDNIIGVPPSNIPAYGVADMSQVYL--DT
C5 YGE----PHTFA-VLYVSYTDGDNVIGVPPYNIPPYGVSDMSIVYF--DV
C6 -------------VISLNPASGSHLVC---------PTNNDTDVVE--NQ
C7 LGY----YTPFA-TLYVGYTRGHGITG---VSQKVGGIFDPSFITL--DT
C8 IST----PTPWR-ILNIVYTDGDRTTG---VTKASGGIFDPSELYV--GV
C9 FGQ----SVPWR-TLYVSYTKGSRITG---VKTPNTGVFDPSTFVE--DV
C10 FGQ----SVPWR-TLYVSYTKGSRITG---VKTPNTGVFDPSTFVE--DV
C11 -------------VITLKPASGNKLVC---------PIANDTDIIT--ER
C12 -------------VISLSIASANKLVC---------PVGNDTDIVP--DT
C13 -------------VISLSVASANKLVC---------PVGNDTDIVT--GN
C14 MTA----NLEMGFVISVQYGTDTNSVC------PMLDLGESSTITNRLGK
C15 -------------VLSFELLNAPATVC---------GPKLSTPLVK--NQ
C16 -------------VLSFELLNAPATVC---------GPKLSTSLVK--NQ
C17 LKN----PLDMVYVITVKYEPGAETVC-----PKQVRPDYSTNITGLLGS
C18 YQYISEEALEMAFIISVQYGTDSNSVC------PLQAVHNDTKVDDKLGR
: . : .
C1 CVNFNFNGLKGTGVLTD-SSKTFQSFQQFGRDASDFTDSVRDPQTLQILD
C2 CVNFNFNGLKGTGVLSS-SSKRFQSFQQFGRDASDFTDSVRDPQTLEILD
C3 CVNFNFNGLKGTGVLSS-SSKRFQSFQQFGRDASDFTDSVRDPQTLEILD
C4 CTTYTIYGMTGRGIITR-SNNTFITG-LYYTSNAGNLLAYKNSTTGIVYN
C5 CTTYTIYGMTGRGIITP-SNNTFITG-LYYTSLAGDLLAYKNSTNGIVYN
C6 CVKYNFYGYSGNGVLTK-SNLTIPDNKLFVASNTGSIIAVK--AQDTVYS
C7 CTEYTVYGITGKGVITS-LNKTIVAG-LYYTSTSGQLLGFKNSTTGEVFA
C8 CTDYTIYGISGRGIINQ-LNTTIIAG-LYYTSPAGQLLGFKNATTGDIYG
C9 CTDYTIYGMSGRGVISR-SNASYIAG-LYYTAISGQLLGFKNATTGETFV
C10 CTDYTIYGMSGRGVISR-SNASYIAG-LYYTAISGQLLGFKNATTGETFV
C11 CVQYSLYGYTGTGVLSKNTSLTVPNGKVFTASSTGAIIGVF--INGTMYS
C12 CVNYNIYGYQGTGVISR-SNYTLPSSKVFSLSSSGELTVFA--VGSSFYQ
C13 CVNYNIYGYQGTGVITT-SNYTLPSTKVFSLSASGELTVFS--VGSSFYQ
C14 CVDYSLYGVTGRGVFQN-CSAVGVKQQRFVYDSFDNLVGYY-SDDGNYYC
C15 CVNFNFNGLKGTGVLTD-SSKTFQSFQQFGRDASDFTDSVRDPQTLQILD
C16 CVNFNFNGFKGTGVLTD-SSKTFQSFQQFGRDASDFTDSVRDPQTLRILD
C17 CISYDIYGITGTGVFQL-CNATGIPQQKFVYDKFDNIIGFH-SDDGNYYC
C18 CIEYSLYGVTGRGVFQN-CTPVGLKQQRFVYDGFDNLVGYH-SDNGNYYC
* : . * * *:: . : .
C1 ISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTIHADHLTHSWRVY
C2 ITPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVPTAIRADQLTPAWRVY
C3 ITPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVPTAIRADQLTPAWRVY
C4 IYPCQLAGQVAVI--SDN------IVGMASSTPNVSLDFNVTVVADSFYY
C5 VYPCQLSGQVAVI--SDN------IVGMASSTPNVSLDFNVTVVADSFYY
C6 ISPCVSVPVSVGY--DPNYEQ-ALLFNGLECNQRAVAVSIPASAY-WLRT
C7 VRPCDLASQVAVY--QND------IIGAMTASRNSSFGFANVSELSNFYY
C8 VRPCALSSQAAVY--QNE------IIGVMTASANESFGFQNVTETPKFFY
C9 VVPCDLSSQAAVI--GDK------VVGVMTSITNSSFEFVKSIETPNFYY
C10 VVPCDLSSQAAVI--GDK------VVGVMTSITNSSFEFVKSIETPNFYY
C11 ITPCVTVPVSVGY--HANFER-VLLFNGLSCSQRSRAVSRPASTL-WNFS
C12 LSPCAFAPISAAF--YKGYTT-SLLFNNLPCSNRHRAVVEPVSAY-WRRS
C13 LSPCAFAPISAAF--YKGYTT-SLLFNNLPCSGRSRAVVEPVSDY-WRAS
C14 VRPCVSVPVSVIY--DKDTNLHATLFGSVACEHVTTMMSQFSRLTQSNLR
C15 ISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTIHADHLTHSWRVY
C16 ISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTLHADQLAPSWRVY
C17 VAPCVSVPVSVIY--DDNTNQYATLFGSVACQHISTMAAQFSRETRASLV
C18 VRPCVSVPVSVIY--DKATNNHATLFGSVACEHVDTMMSQFSRMTQSRLR
: ** . : .
C1 TTGPHV---FQTQAGCLIGAEHVN--VSYQCDIPI----GAGICASYHTA
C2 STGVNV---FQTQAGCLIGAEHVN--ASYECDIPI----GAGICASYHTA
C3 STGVNV---FQTQAGCLIGAEHVN--ASYECDIPI----GAGICASYHTA
C4 LSNSAE-----------------------PCDQPVLTYAGIGICADGSIT
C5 LSNSAE-----------------------PCDQPVLTYAGIGICADGSIT
C6 VSDNQTAGVFDTPSGCVYNVINRTDITVNACDMPI----GNSLCLINATS
C7 HSNGHL-----------------------GCEEPVLIYGKMGICSDGSLT
C8 HSNGNS-----------------------TCTEPVLTYGSVGVCPDGTLI
C9 LTNATA-----------------------NCTSPVITYGKLGVCEDGSIA
C10 LTNATA-----------------------NCTSPVITYGKLGVCEDGSIA
C11 VSDESA---IDTLSGCVVNAILHNDTTVSTCSMPL----GNSLCLINDTT
C12 VADNNT---FDTTAGCIFNAYNLTSIVVNQCDLPI----GDSYCLQPSLI
C13 VVNNST---FDTSAGCIFNAINSTSIVVNQCDLPI----GDSYCLQPSTI
C14 RRDSNA--PLQTAVGCVVGLSNNSL-VVSDCRLPL----GQSLCAVPPVT
C15 TTGPYV---FQTQAGCLIGAEHVN--ASYQCDIPI----GAGICASYHTA
C16 TTGPYV---FQTQAGCLIGAEHVN--ASYQCDIPI----GAGICASYHTA
C17 SRNMQN--LLQTSVGCVMGFHETND-TVEDCNLSL----GQSLCAIPPNT
C18 VRNIDDAGPMQTSVGCVVGLVNTSL-IVDNCQLPL----GQSLCAVPATT
. * .: . *
C1 SLLRSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTT
C2 STLRSVGQ------KSIVAYTMSLGAENSIAYANNS-IAIPTNFSISVTT
C3 STLRSVGQ------KSIVAYTMSLGAENSIAYANNS-IAIPTNFSISVTT
C4 NNTARRAA-----------------SDPISPVISGN-ISVPTNFTFSVQV
C5 NNTARRAA-----------------SDPISPVISGN-ISVPTNFTFSVQV
C6 TQARATSGDDTKSYLSLVNYDPTY-TSLTKVLTPVYWVSIPTNFTLAAGT
C7 EVNNKDAE-----------------QQPVSPIATAN-VTVPVNFTVSVQV
C8 MVQTRSGN-----------------VNPVSPIVSGN-ITIPLNFTVSVQV
C9 EVKVNTHV-----------------QTPVSPISTGN-ITVPSNFTVSVQV
C10 EVKVNTHV-----------------QTPVSPISTGN-ITVPSNFTVSVQV
C11 VAIAHAVG---LPKLYLVNYDPLYDNNSATPITPVYWVKIPTNFTLTATD
C12 KGFEATLS--------LVTYNPL--ADSLTPITPVYQVSVPTNFTLVAST
C13 SRQGSTLL--------LVTYDPL--SDTLTPITPVYEISVPTNFTLVAST
C14 SFRRRSAS---EFQLAVLNYTSPIVVTPIN--SSGFTAAIPTNFSFSVTQ
C15 SLLRSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTT
C16 SLLWSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTT
C17 NLRVGRST----FGLGSLAYNSPLRVDALN--SSEFKVSLPLNFTFGVTQ
C18 IRAATGTT--SSLQLATINFTEPHMLTPIN--SSRFIVEIPTNFSFGVTQ
:* **:. .
C1 EVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQ
C2 EVMPVSMAKTSVDCTMYICGDSQECSNLLLQYGSFCTQLNRALTGVALEQ
C3 EVMPVSMAKTSVDCTMYICGDSQECSNLLLQYGSFCTQLNRALTGVALEQ
C4 EYIQLMLKPVTVDCSVYVCNGNPRCLQLLAQYASACRTIEQALQ-LSARL
C5 EYIQLMLKPVTVDCSVYVCNGNPRCLQLLAQYASACRTIEQALQ-LSARL
C6 EYIQTTSPKINIDCAKYLCGDSDKCLTVLLQYGTFCDDVNKALAEVSSVI
C7 EYLQMYMQPVSVDCNTYVCSGNVHCLRLLTQYASACRNIESSLQ-LSARL
C8 EYLQMYLQPVSVDCNMYVCGGNPHCLRLMSQYASACRTIEESLQ-LGARL
C9 EYLQMYMRPVSVDCAMYVCNGNPHCLRLLTQYASACRTIEDALQ-LSARL
C10 EYLQMYMRPVSVDCAMYVCNGNPHCLRLLTQYASACRTIEDALQ-LSARL
C11 EFIQTNAPKVTIDCARYLCGDSSRCLNILLHYGTFCDDINKALAKVNTIL
C12 EYIQTYASKISIDCAKYLCGDSSQCRTVLLQYGTFCNDVNVALTRVFTLL
C13 EYIQTYASKISIDCAKYLCGDSSQCRTVLLQYGTFCNDVNVALTRVFTLL
C14 EYVETSIQKVTVDCKQYVCNGFSRCEKLLVEYGQFCSKINQALHGANLRQ
C15 EVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQ
C16 EVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQ
C17 EYIETSIQKITVDCKQYVCNGFAKCEKLLEQYGQFCSKINQALHGANLRQ
C18 EFIQTTIQKVTVDCKQYVCNGFEKCEQLLREYGQFCAKINQALHGANLRQ
* : .:** *:*.. .* :: .*. * :: :*
C1 DKNTQEVFAQVKQMYKTP-TIRDFGG-FNFSQIL----PDPLKPTKRSFI
C2 DKNTQEVFAQVKQMYKTP-AIKDFGG-FNFSQIL----PDPSKPTKRSFI
C3 DKNTQEVFAQVKQMYKTP-AIKDFGG-FNFSQIL----PDPSKPTKRSFI
C4 ESVEVNSMISISQQALDLGVIDNFNHDFNLTNVL------PASVGGRSAV
C5 ESVEVNSMISISQQALDLGVIDNFNHDFNLTNVL------PANVGGRSAV
C6 DSTMVSLVSELTADVVRS-ENTAFDTTYNFTSLMGCLGSSCNTRNYRSAL
C7 ESLEVNSAITVSERAASLANITNFEN-YNLSVLL------P-NLNGRSAM
C8 ESTEVANTISVSSQAVQLANITNFDS-YNVSVLL------P-RANGRSFI
C9 ESIEVNSVISVSEDALELANISNFDH-YNMSALL------P-KKNGRSFI
C10 ESIEVNSVISVSEDALELANISNFDH-YNMSALL------P-KKNGRSFI
C11 DSALLSLSKELSINTRDEIQSFAFGGDYNFTGLMGCLGPNCGATTYRSAL
C12 DNSLVDTFSSLKSTAPVQ---LAYTGDFNFTSLVGCIGTDCDSKSHRSAL
C13 DNSLVDTFSSLKSTAPAQ---LAYTGDFNFTSLVGCVGTDCDSKSYRSAL
C14 DESVYSLYSNIKTTSTQT-LEYGLNGDFNLT-LLQVPQIGGSSSGYRSAI
C15 DKNTQEVFAQVKQMYKTP-TIRDFGG-FNFSQIL----PDPLKPTKRSFI
C16 DKNTQEVFAQVKQMYKTP-TIRDFGG-FNFSQIL----PDPLKPTKRSFI
C17 DDFVRNLFESVKTPQTVP-LTTGFGGEFNLT-LLEPLSVSTGSSNARSAL
C18 DESVSNLFSNIKTQATQP-LDAGLTGDFNLT-LLQVPKVVTSQYSYRSAI
:. :. :*.: :: ** :
C1 EDLLYNKVTLADAGFMKQ-YADCL---GGINARDLICAQKFNGLTVLPPL
C2 EDLLFNKVTLADAGFMKQ-YGECL---GDISARDLICAQKFNGLTVLPPL
C3 EDLLFNKVTLADAGFMKQ-YGECL---GDISARDLICAQKFNGLTVLPPL
C4 EDLLFDKVVTSGLGTVDADYKECAS-RTANTVAEVGCVQYYNGIMVLPGV
C5 EDLLFDKVVTSGLGTVDADYKECAS-RTANWVAEVGCVQYYNGIMVLPGV
C6 SDLLYNKVKVADPGFMSS-YQKCIDSQWGGSVRDLICTQNFNGISVLPPI
C7 EDLLFNKVVTNGLGTVDQDYKQCIKDKGVGDVADVACAQYYNGVMVLPGV
C8 EDLLFDKVVTSGLGTVDQDYKQCVNEWGIGEVADLSCAQYYNGIMVLPGV
C9 EDLLFNKVVTNGLGTVDQDYKKCMKDKGFGEASDIACVQYYNGIMVLPGV
C10 EDLLFNKVVTNGLGTVDQDYKKCMKDKGFGEASDIACVQYYNGIMVLPGV
C11 SDLLYDKVKITDPGFMQS-YQKCIDSQWGGSVRDLLCTQTYNGIAVLPPI
C12 SDLLFSKVSVADPGFMQS-YQQCLDAQWGGNIRDLLCTQTFNGISVLPPI
C13 SDLLFNKVSVADPGFMQS-YQKCLDSQWGGNIRDLLCTQTFNGISVLPPI
C14 EDLLFDKVTIADPGYMQG-YDDCMK-QGPQSARDLICAQYVSGYKVLPPL
C15 EDLLYNKVTLADAGFMKQ-YADCL---GGINARDLICAQKFNGLTVLPPL
C16 EDLLYNKVTLADAGFMKQ-YADCL---GGINARDLICAQKFNGLTVLPPL
C17 EELLFDKVTIADPGYMQG-YDDCMQ-QGPASARDLICAQYVAGYKVLPPL
C18 EDLLFNKVTIADPGYMQG-YDECMK-QGPPSARDLICAQFVAGYKVLPPL
.:**:.** . * :. * .* :: *.* * *** :
C1 LTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C2 LTDEMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C3 LTDEMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C4 VDQSLLAQYSAALTGAMVLGGITAAAA----VPFSIAVQSRLNYLALQTD
C5 VDQSLLAQYSAALTGAMVLGGITAAAA----VPFSIAVQSRLNYLALQTD
C6 VSPAMQSLYTSLLVGAVASAGYTFGITSVGVIPFATQLQFRLNGLGVTTQ
C7 VDDTKMSLYTASLVGGMVLAGFTAGAA----IPFSLAVQARLNYVALQTD
C8 VDANMMTLYTASLTGAMVFGGITASAS----IPFSLAVQSRLNYVALQTD
C9 VDDSKMALYTAALTGGMLLAAFTAGAS----IPFSLAVQSRLNYVALQTD
C10 VDDSKMALYTAALTGGMLLAAFTAGAS----IPFSLAVQSRLNYVALQTD
C11 VSPAMQALYTSLLVGAVASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQ
C12 VSPSMQALYTTALVGGIAASGFTFGVSSAAVIPFATQLQFRLNGLGVTTN
C13 VSPSMQALYTTALVGGIAASGFTFGVSSAAVIPFATQLQFRLNGLGVTTN
C14 YDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQ
C15 LTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C16 LTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C17 MDVNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSIFYRLNGVGITQQ
C18 YDPNMESMYTTSLTGAILGAAWTAGASSFAAIPFAQSVFYRMNGIGITQQ
: *:: * .. .. * . :**: : *:* :.: :
C1 VLYENQKQIANQFNKAITQIQESLT--------------TTATALGKLQD
C2 VLYENQKQIANQFNKAISQIQESLT--------------TTSTALGKLQD
C3 VLYENQKQIANQFNKAISQIQESLT--------------TTSTALGKLQD
C4 VLQRNQQQLANSFNAAMGNITEAFGRVNDAIEQTSHAISTVAQALDKVQN
C5 VLQRNQQQLANSFNAAMGNITDAFGRVNDAIEQTSHAVSTVAQALNKVQT
C6 VLVQNQQLIANSFNNALTNIQKGFD--------------ATNLALSQMQS
C7 VLQRNQQILAESFNSALSNITEAFTEVNEAIKNTADAINTVATALGKVQS
C8 VLNRNQEILAQSFNSALGNITAAFSEVNHAFQETSDAINTVAQALGKVQT
C9 VLQKNQQILATSFNNAMSNITVAFTEVNQAIKETSDAINTVAKALGKVQS
C10 VLQKNQQILATSFNNAMSNITVAFTEVNQAIKETSDAINTVAKALGKVQS
C11 VLVENQKLIASSFNNALVNIQKGFT--------------ETSIALSKMQD
C12 VLMENQQLIANAFNKALVSIQEGFT--------------ATNQALNKIQT
C13 VLMENQQLIANAFNKALVSIQEGFT--------------ATNQALNKIQT
C14 VLSENQKLIANKFNQALGAMQTGFT--------------TSNQAFSKVQD
C15 VLYENQKQIANQFNKAITQIQESLT--------------TTATALGKLQD
C16 VLYENQKQIANQFNKAITQIQESLT--------------TTSTALGKLQD
C17 VLSENQKIIANKFNQALGAMQTGFT--------------TTNEAFQKVQD
C18 VLSENQKQIANKFNQALGAMQTGFT--------------TTNLAFAKVQE
** .**: :* ** *: : .: *: ::*
C1 VVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGR
C2 VVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGR
C3 VVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGR
C4 VVNDQGMALSQLTKQLASNFQAISSSIEDLYNRLDRVEADQQVDRLITGR
C5 VVNDQGMALSQLTKQLASNFQAISSSIEDLYNRLDRVEADQQVDRLITGR
C6 VINQHAQQLQTLVNQLGNSFGAISSSINEIFSRLDGLEANAQVDRIINGR
C7 VVNQQGEALAQLTKQLSSNFQAISSSIEDIYLRLDKLAADAQVDRLISGR
C8 VVNEQGQALSQLTRQLASNFQAISNSIEDIYNRLDGLTADAQVDRLITGR
C9 VVNEQGQALSQLTRQLASNFQAISSSIEDIYNRLDSLAADAQVDRLITGR
C10 VVNEQGQALSQLTRQLASNFQAISSSIEDIYNRLDSLAADAQVDRLITGR
C11 VINQHAAQLQTLVTQLGNSFGAISSSINEIFSRLEGLAANAEVDRLINGR
C12 VVNNNALQLQVLVQQLGNTFGAISASVNEIFSRLDLLEANAEVDRLISGR
C13 VVNNNALQLQVLVQQLGNTFGAISASVNEIFSRLDLLEANAEVDRLISGR
C14 AVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGR
C15 VVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGR
C16 VVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGR
C17 AVNTNAQALAKLASELSNTFGAISSSIGDIIQRLDVLEQEVQIDRLINGR
C18 AVNANAQALSKLASELSNTFGAISSSISDILKRLDAVEQEAQIDRLINGR
.:* :. * *. :*...* *** : :: **: : : ::**:*.**
C1 LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLM
C2 LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGRGYHLM
C3 LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGRGYHLM
C4 LAALNAFVAQQLTKYTDVRASRQLAQEKINECVKSQSFRYGFCGNGTHVF
C5 LAALNAFVAQQLTKYTDVRASRQLAQEKINECVKSQSFRYGFCGNGTHVF
C6 TVVLNTYVTQLLLKASEVRSQAALARQKISECVKAQSLRNDFCGNGTHVF
C7 LAGLNAFVTQTLTKYTEVRASRQLALQKVNECVKSQSSRYGFCGNGTHLF
C8 IGALNAFVAQTLTKYTEVRASRQLAIQKINECVKSQSARFGFCGNGTHLF
C9 LGALNAFVTQTLTRYTDARASRQLAIQKINECVKSQSMRYGFCGNGTHLF
C10 LGALNAFVTQTLTRYTDARASRQLAIQKINECVKSQSMRYGFCGNGTHLF
C11 MMVLNTYVTQLLLQASEAKAQNALAVQKISECVKAQSLRNDFCGNGTHVL
C12 MVVLNTYVTQLLIQASELRSQAELAKQKMSECVKSQSLRNDFCGNGTHVL
C13 MVVLNTYVTQLLIQASELRSQAELAKQKMSECVKAQSTRNDFCGNGTHVF
C14 LTSLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIV
C15 LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLM
C16 LQSLQTYVTQQLIRAAEIRTSANLAATKMSECVLGQSKRVDFCGKGYHLM
C17 LTTLNAFVAQQLVRSESAARSAQLAKDKVNECVKSQSTRSGFCGQGTHIV
C18 LTSLNAFVAQQLVRSETAARSSQLAVDKVNECVKSQSKRNGFCGSGNHIV
*:::*:* * : . ** *:.*** .** * .*** * *:.
C1 SFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHEGK---AYFPREGVFVS
C2 SFPQAAPHGVVFLHVTYVPSQEKNFTTAPAICHEGK---AYFPREGVFVS
C3 SFPQAAPHGVVFLHVTYVPSQEKNFTTAPAICHEGK---AYFPREGVFVS
C4 SVVNAAPDGMMFFHSVLLPTAYMEVAAFSGLCVEGK-GFVLREVGNVLFE
C5 SVVNAAPDGMMFFHSVLLPTAYMEVAAFSGLCVEGK-GFVLREVGNVLFE
C6 SVPQLAPNGVMFIHYTYQPTAYALVQTAAGLCYNGT---GYAPLSGMFVL
C7 SVVNAAPNGIMFFHTVLIPSSYTTVQAWAGVCVNGDVGLILRDVRNTLFY
C8 SIANAAPNGIMLFHTVLLPSEYTTVQAWAGICIDNNVGLILRDFKTTLFF
C9 SIANAAPNGVMLFHTVLIPTEFVTVEAWSGVCVDGTHGLILRDVRTTLFQ
C10 SIANAAPNGVMLFHTVLIPTEFVTVEAWSGVCVDGTHGLILRDVRTTLFQ
C11 SIPQLAPNGVLFIHYAYTPTDYALVQTSAGLCYNGT---GYAPLRGMFVL
C12 SIPQLAPNGMLFIHYSYQPTKYAQVYTTAGLCFNGT---GFVPRDGLFVR
C13 TIPQLAPNGMLFIHYSYQPTNYVQVYTTAGLCFNGT---GFVPRDGLFVR
C14 SFVANAPNGFYFFHVGYVPTNFTNVTAAYGLCNNNNPLLCIAPIDGYFIT
C15 SFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHEGK---AYFPREGVFVS
C16 SFPQSAPHGVVFLHVTYVPSQERNFTTAPAICHEGK---AYFPREGVFVS
C17 SFVINAPNGLYFMHVGYHPSQHIEVVAAYGLCDAANPTNCIAPVNGYFIK
C18 SFVSNAPNGLYFFHVGYVPTAHINATAAYGLCNTELPPRCIAPIDGYFVT
:. **.*. ::* *: : .:* :.
C1 NGS-------SWFITQRNFYSPQIITTDNTFVAGSCDVVIGIINNTVYDP
C2 NGT-------SWFITQRNFYSPQIITTDNTFVAGNCDVVIGIINNTVYDP
C3 NGT-------SWFITQRNFYSPQIITTDNTFVAGNCDVVIGIINNTVYDP
C4 KDG-------RYFITARRMFEPRIPQTADFVQISGCDVVYLNVTRDELPT
C5 KDG-------SYLITARKMFEPRVPQTADFVQISGCDVVYLNVTRDELPT
C6 PND-TN----LWHYTKMNFYNPVNITFENTQVLDSCAVNYSYVNYSVIEP
C7 LDS-------KYYITTRDMYQPRTPVQSDFVRISNCSVSYVNITSEQLGD
C8 SD--------KYYVTPRDMFEPRTPVQADFVRIANCSVNYLNISSSELGT
C9 QGS-------TYYVTTRDMFEPRTPVAADFVRIANCSVTYVNITADSLGE
C10 QGS-------TYYVTTRDMFEPRTPVAADFVRIANCSVTYVNITADSLGE
C11 PNN-TN----MWHFTSMQFYNPVNISYSNTQILTSCSINYTSVNYSVLQP
C12 ENNESQ----VWYFTKASFYNPVNLSYENTHLLDTCGVNYTTVNNSVLNP
C13 ENNASQ----LWYFTKASFYNPVNLSYENTRLLDTCGVNYTTVNNTVLNP
C14 NQTTTYSIDTEWYYTGSSFFKPEPITQVNSRYVSS-DVKFEKLENNLPPP
C15 NGS-------SWFITQRNFYSPQIITTDNTFVAGSCDVVIGIINNTVYDP
C16 NGS-------SWFITQRNFYSPQIITTDNTFVAGSCDVVIGIINNTVYDP
C17 NQT-TRGVD-DWSYTGSSFYAPEPITTLNTRYVAP-QVTFQNISTNLPPP
C18 NSSATRDADPEWYYTGSAFYNPEPITLANTRYVSK-DTKYQELNNKLPPP
: * :: * : :
C1 LQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVDIQKEID----
C2 LQPEL--DSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEID----
C3 LQPEL--DSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEID----
C4 IIPDY--VDVNGTVEDILSKLPNRTSPELDLDIFNATYLNLTSEIADLTA
C5 IIPDY--VDVNGTVEDILSKLPNRTSPEFNLDIFNATYLNLTSEIADLTA
C6 TPPSS--YNFTEEFNKWYKNHSSYFNNTFNPGDFNFTGVNISEQLA----
C7 IIPDY--LDVNKTLNDLQQSRPNYTVPDLGLDQYNTTILNLTSEIAMLQN
C8 IIPDY--IDVNKTLEELEQQRPNYTLPELDIDRFNNTYLNLSAEIAELQR
C9 IIPDY--IDVNKTLEEL--GRPNFTLPDFNLDQFNNTYLNLSAEIALLNA
C10 IIPDY--IDVNKTLEEL--GRPNFTLPDFNLDQFNNTYLNLSAEIALLNA
C11 SAPSD--YDFQKEFDKFYKNLSTSFNNTFNPNDFNFSMVDVTAQIS----
C12 IEPPN--YNFQEEFDKYFKNQSSQFNITFDSSQFNVSIVNLNEQMA----
C13 IEPPN--YDFQEEFDKYFKNQSSHFNITFDSSQFNVSIVNLNEQMA----
C14 LLENSTDVDFKDELEEFFKNVTSHGPNFAEISKINTTLLDLSDEMA----
C15 LQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVDIQKEID----
C16 LQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVDIQKEID----
C17 LLGNSTGTDFKDELDEFFKNVSTSIPNFGALTQINTTLLDLSDEML----
C18 LLSNQTDESFRDELEEFFKNVSSQGPNFQEISKINATLLDLSDEMK----
.. .:. .. * : ::: ::
C1 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C2 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C3 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C4 RSESLKNTTLELKELIANINATLVDLEWLNRVETYIKWPWWVWLIIVLVL
C5 RSESLKNTTLELKELIANINATLVDLEWLNRVETYIKWPWWVWLIIVLVL
C6 ----------TLTDVVNQLNKSFIDLKQMNVYEQTIKWPWYVWLAMIAGL
C7 KSDSLIESTVKLHKLIEQLNQTYVDLEWLNRLESYVKWPWWVWLAILLAL
C8 KSESLQNSTIQLQELIERINSSYVDLELLKRIETYVKWPWYVWLAIILVM
C9 KSESLYNTTQRLEKSIENINNSYIDLELLNRLESYVKWPWYVWLAIFLAL
C10 KSESLYNTTQRLEKLIENINNSYIDLELLNRLESYVKWPWYVWLAIFLAL
C11 ----------SLHQVVDQLNQSFIDLKKLNVYEKTIKWPWYIWLAMIAGI
C12 ----------ALDSVVKSLNESFIDLKKLGVYTQQPNTPWYAWLGMIAGL
C13 ----------ALDSVVKSLNESFIDLKKLGVYTQTIKWPWYAWLGMIAGL
C14 ----------ILQEVVKQLNDSYIDLKELGNYTYYNKWPWYIWLGFIAGL
C15 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C16 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C17 ----------ALQQVVKALNESYIDLKELGNYTYYNKWPWYIWLGFIAGL
C18 ----------VLNEVVKQLNESYIDLKELGNYTYYQKWPWYVWLGFIAGL
* . :* : :**: : : **: ** :. :
C1 VGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLH
C2 IAIVMATILLCCMTSCCSCLKGAC-SCGSCC-KFDE-DDSEPVLKGVKLH
C3 IAIVMATILLCCMTSCCSCLKGAC-SCGSCC-KFDE-DDSEPVLKGVKLH
C4 ILFTCLMLFCCCSTGCCGIFSCLASSCGACCDIRGTKLQRYEAIE--KVH
C5 ILFTCLMLFCCCSTGCCGIFSCLASSCGACCDIRGTKLQRYEAFE--KVH
C6 VGLVLAVIMLLCMTNCCSCFKGLC-SCRHC--SYDEIEDVYPAVRVHNKR
C7 IFTSFILLYCCCSTGCCGCTSCLA----DCRGQRLQ------RYEVEKVH
C8 SLFSFLMLYCCCMTGCCGCCSCLTSCCFDCRGKRLQ------QYEVEKVH
C9 ILFSFLMLYCCMATGCCGCCSCLSNSCFDCGGRRLQ------RYEVEKVH
C10 ILFSFLMLYCCMATGCCGCCSCLSNSCFDCGGRRLQ------RYEVEKVH
C11 VGLVLAVIMLMCMTNCCSCFKGMC-DCRRCCGSYDSYDDVYPAVRVNKKR
C12 VGLALAVFMLCCMTNCCSGFRGIC-SCKQC--QYDDYADVYPAVRVSGKR
C13 VGLALAVFMLCCMTNCCSGFRGIC-SCRQC--QYDDYADVYPAVRVSGKR
C14 VALLLCVFFLLCCTGCGTSCLGKM-KCRNCCDSYED-------FDVEKIH
C15 VGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLH
C16 VGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLH
C17 LALALCVFFILCCTGCGTSCLGKL-KCNRCCDKYEEYD-----LEPHKIH
C18 VALALCVFFLLCCTGCGTNCMGKF-KCNRCCDSYDDYE-----VEPHKIH
: *.* * :
C1 YT
C2 YT
C3 YT
C4 VQ
C5 VQ
C6 TE
C7 IQ
C8 IQ
C9 IQ
C10 IQ
C11 TV
C12 TV
C13 TV
C14 VH
C15 YT
C16 YT
C17 IH
C18 VH
-- Starting log on Thu Oct 27 01:20:14 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus.result/gapped_alignment/codeml,JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 18 taxa and 4656 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C11
Taxon 4 -> C12
Taxon 5 -> C13
Taxon 6 -> C14
Taxon 7 -> C15
Taxon 8 -> C16
Taxon 9 -> C17
Taxon 10 -> C18
Taxon 11 -> C2
Taxon 12 -> C3
Taxon 13 -> C4
Taxon 14 -> C5
Taxon 15 -> C6
Taxon 16 -> C7
Taxon 17 -> C8
Taxon 18 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1666833616
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1151985824
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 2048837745
Seed = 1045352482
Swapseed = 1666833616
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 815 unique site patterns
Division 2 has 662 unique site patterns
Division 3 has 977 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -77209.921541 -- 57.269375
Chain 2 -- -71498.173465 -- 57.269375
Chain 3 -- -73957.879336 -- 57.269375
Chain 4 -- -76314.271261 -- 57.269375
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -76240.968970 -- 57.269375
Chain 2 -- -76200.310854 -- 57.269375
Chain 3 -- -71224.827443 -- 57.269375
Chain 4 -- -76775.162663 -- 57.269375
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-77209.922] (-71498.173) (-73957.879) (-76314.271) * [-76240.969] (-76200.311) (-71224.827) (-76775.163)
1000 -- (-38992.804) [-38734.555] (-38981.553) (-38875.113) * (-39238.656) (-38812.544) [-38710.708] (-39285.994) -- 2:29:51
2000 -- (-38504.367) [-38426.620] (-38482.734) (-38476.554) * (-38568.535) [-38358.504] (-38450.840) (-38711.137) -- 2:29:42
3000 -- (-38387.909) (-38346.350) (-38429.209) [-38314.395] * (-38359.835) [-38322.434] (-38380.073) (-38409.316) -- 2:29:33
4000 -- (-38366.479) (-38323.460) (-38325.484) [-38315.879] * (-38326.825) [-38311.027] (-38332.590) (-38322.275) -- 2:29:24
5000 -- (-38328.405) (-38314.413) (-38299.513) [-38305.872] * (-38320.498) [-38307.168] (-38327.228) (-38306.969) -- 2:25:56
Average standard deviation of split frequencies: 0.034919
6000 -- (-38309.784) (-38319.430) [-38311.040] (-38303.446) * (-38317.727) [-38307.165] (-38310.957) (-38310.422) -- 2:26:20
7000 -- (-38313.519) [-38307.825] (-38313.386) (-38301.607) * (-38314.662) (-38307.135) [-38305.636] (-38317.484) -- 2:26:35
8000 -- [-38304.201] (-38309.397) (-38313.101) (-38309.173) * [-38309.354] (-38305.092) (-38303.341) (-38313.431) -- 2:26:44
9000 -- [-38297.422] (-38310.914) (-38300.828) (-38308.005) * (-38309.243) (-38303.812) [-38302.640] (-38319.911) -- 2:26:48
10000 -- (-38307.484) [-38309.210] (-38297.420) (-38310.288) * (-38329.511) (-38311.384) (-38310.961) [-38304.585] -- 2:25:12
Average standard deviation of split frequencies: 0.005524
11000 -- [-38298.642] (-38313.962) (-38300.986) (-38314.872) * (-38313.446) (-38315.671) (-38300.356) [-38307.383] -- 2:25:21
12000 -- (-38309.171) (-38303.767) (-38306.036) [-38308.293] * (-38317.183) [-38308.612] (-38305.860) (-38301.095) -- 2:25:27
13000 -- (-38306.241) (-38315.687) (-38305.908) [-38301.565] * (-38298.746) [-38306.390] (-38315.393) (-38307.295) -- 2:25:31
14000 -- [-38305.559] (-38309.269) (-38310.091) (-38311.382) * (-38299.439) (-38310.898) (-38325.266) [-38306.573] -- 2:25:33
15000 -- (-38302.942) (-38302.889) (-38301.602) [-38301.409] * (-38297.852) (-38317.117) (-38308.726) [-38300.912] -- 2:25:33
Average standard deviation of split frequencies: 0.020797
16000 -- (-38315.806) (-38296.992) (-38300.496) [-38303.303] * (-38304.662) [-38303.664] (-38311.839) (-38307.810) -- 2:24:31
17000 -- (-38306.150) (-38310.298) [-38296.415] (-38309.472) * (-38308.628) (-38304.000) [-38299.899] (-38306.495) -- 2:24:33
18000 -- (-38306.796) [-38301.593] (-38314.089) (-38299.987) * [-38302.878] (-38314.844) (-38308.575) (-38311.882) -- 2:24:34
19000 -- (-38309.046) (-38307.689) (-38306.277) [-38304.947] * (-38298.531) (-38307.524) (-38303.936) [-38304.420] -- 2:24:34
20000 -- (-38303.102) [-38301.286] (-38308.908) (-38313.197) * [-38295.284] (-38314.512) (-38309.086) (-38301.143) -- 2:24:33
Average standard deviation of split frequencies: 0.021384
21000 -- (-38304.053) [-38301.622] (-38311.265) (-38311.074) * [-38301.310] (-38302.008) (-38309.554) (-38304.663) -- 2:24:31
22000 -- (-38307.486) (-38307.260) [-38301.779] (-38312.336) * (-38301.381) (-38303.566) (-38304.960) [-38299.275] -- 2:23:44
23000 -- [-38305.933] (-38309.358) (-38320.201) (-38309.702) * (-38309.265) [-38304.437] (-38302.135) (-38299.111) -- 2:23:43
24000 -- [-38314.040] (-38309.803) (-38323.394) (-38309.396) * (-38310.062) [-38299.566] (-38305.722) (-38304.311) -- 2:23:41
25000 -- (-38310.514) (-38312.828) (-38321.771) [-38306.782] * (-38307.686) (-38305.479) [-38295.316] (-38312.993) -- 2:23:39
Average standard deviation of split frequencies: 0.024930
26000 -- (-38304.725) [-38305.837] (-38302.257) (-38311.482) * [-38306.593] (-38314.525) (-38305.468) (-38311.998) -- 2:22:58
27000 -- (-38304.880) [-38302.368] (-38307.491) (-38317.480) * (-38309.274) (-38297.125) [-38304.895] (-38297.994) -- 2:22:56
28000 -- (-38308.874) [-38305.771] (-38315.504) (-38305.529) * (-38313.180) (-38322.084) [-38297.758] (-38303.348) -- 2:22:54
29000 -- (-38300.629) (-38308.813) (-38312.822) [-38301.526] * (-38319.321) (-38310.856) [-38300.459] (-38299.283) -- 2:22:51
30000 -- (-38307.119) (-38305.601) (-38303.157) [-38298.306] * (-38314.911) (-38296.797) (-38298.557) [-38298.962] -- 2:22:48
Average standard deviation of split frequencies: 0.022097
31000 -- (-38302.429) (-38314.105) [-38307.011] (-38299.185) * (-38309.087) [-38300.822] (-38307.063) (-38304.862) -- 2:22:44
32000 -- [-38306.282] (-38317.788) (-38306.151) (-38305.379) * (-38307.878) (-38308.397) (-38311.317) [-38298.490] -- 2:22:40
33000 -- (-38306.895) (-38311.629) (-38307.728) [-38301.924] * (-38311.516) (-38311.406) (-38310.812) [-38301.573] -- 2:22:36
34000 -- (-38311.814) (-38304.478) [-38308.383] (-38297.691) * (-38304.122) [-38303.707] (-38307.847) (-38300.351) -- 2:22:03
35000 -- (-38302.627) (-38312.181) (-38306.082) [-38299.834] * (-38313.175) (-38310.399) [-38310.063] (-38305.261) -- 2:21:59
Average standard deviation of split frequencies: 0.021279
36000 -- (-38296.811) (-38309.692) [-38307.475] (-38310.800) * (-38314.975) (-38306.943) [-38305.547] (-38306.918) -- 2:21:55
37000 -- [-38306.045] (-38324.687) (-38303.680) (-38295.937) * [-38318.389] (-38302.070) (-38303.996) (-38307.019) -- 2:21:50
38000 -- (-38313.914) (-38306.279) [-38308.371] (-38298.842) * (-38312.150) (-38312.329) (-38305.046) [-38304.895] -- 2:21:46
39000 -- (-38314.291) (-38307.294) (-38311.979) [-38307.321] * (-38310.593) (-38315.362) [-38307.648] (-38302.846) -- 2:21:16
40000 -- (-38307.765) (-38304.649) [-38307.659] (-38308.389) * (-38309.971) (-38318.597) [-38300.309] (-38304.778) -- 2:21:12
Average standard deviation of split frequencies: 0.019561
41000 -- (-38301.851) [-38299.175] (-38304.407) (-38312.825) * (-38302.646) [-38297.859] (-38308.585) (-38304.855) -- 2:21:07
42000 -- (-38314.689) (-38298.753) [-38298.387] (-38312.261) * [-38307.393] (-38306.881) (-38308.308) (-38307.062) -- 2:21:02
43000 -- [-38311.277] (-38307.545) (-38301.919) (-38311.604) * [-38302.339] (-38309.484) (-38316.134) (-38305.171) -- 2:20:57
44000 -- [-38308.785] (-38311.751) (-38301.095) (-38311.753) * (-38303.272) (-38309.826) (-38321.340) [-38297.255] -- 2:20:30
45000 -- (-38318.639) [-38313.452] (-38307.875) (-38305.437) * (-38304.546) (-38297.543) (-38307.476) [-38304.042] -- 2:20:25
Average standard deviation of split frequencies: 0.017293
46000 -- [-38306.183] (-38300.650) (-38307.188) (-38300.893) * [-38298.940] (-38305.775) (-38313.097) (-38307.329) -- 2:20:20
47000 -- (-38306.245) [-38305.797] (-38306.298) (-38315.079) * (-38301.959) (-38300.846) (-38313.959) [-38304.051] -- 2:20:14
48000 -- [-38305.611] (-38309.792) (-38310.184) (-38310.488) * [-38306.301] (-38312.402) (-38314.155) (-38303.615) -- 2:20:09
49000 -- (-38310.586) (-38308.384) (-38311.307) [-38302.300] * (-38310.451) (-38310.755) (-38304.910) [-38308.786] -- 2:20:03
50000 -- (-38314.393) [-38311.801] (-38302.386) (-38306.816) * (-38301.830) (-38308.147) (-38307.148) [-38304.974] -- 2:19:39
Average standard deviation of split frequencies: 0.018608
51000 -- (-38309.577) (-38302.111) (-38302.462) [-38302.430] * [-38300.122] (-38304.333) (-38321.342) (-38314.327) -- 2:19:33
52000 -- (-38308.385) [-38304.723] (-38306.998) (-38303.042) * [-38301.937] (-38300.715) (-38306.308) (-38306.400) -- 2:19:27
53000 -- (-38304.692) (-38308.467) [-38301.971] (-38308.396) * (-38299.602) (-38315.702) (-38306.736) [-38307.170] -- 2:19:22
54000 -- (-38298.969) [-38302.704] (-38310.074) (-38301.712) * [-38298.017] (-38306.597) (-38307.058) (-38302.130) -- 2:19:16
55000 -- [-38307.671] (-38300.824) (-38311.633) (-38317.559) * (-38307.427) [-38295.055] (-38305.772) (-38305.457) -- 2:19:10
Average standard deviation of split frequencies: 0.021045
56000 -- (-38303.684) (-38296.897) [-38304.357] (-38307.322) * (-38311.771) (-38302.313) [-38306.527] (-38312.882) -- 2:19:04
57000 -- (-38308.909) (-38299.218) [-38304.753] (-38307.055) * (-38318.252) (-38315.557) (-38310.617) [-38304.598] -- 2:18:58
58000 -- (-38321.605) [-38303.767] (-38301.483) (-38309.369) * (-38300.458) (-38312.852) (-38304.822) [-38304.359] -- 2:18:51
59000 -- (-38316.013) [-38308.170] (-38306.676) (-38303.208) * (-38303.581) [-38308.021] (-38311.501) (-38295.413) -- 2:18:29
60000 -- (-38302.921) (-38307.524) (-38316.970) [-38302.505] * (-38303.138) (-38309.384) (-38304.449) [-38305.044] -- 2:18:23
Average standard deviation of split frequencies: 0.016026
61000 -- [-38303.762] (-38306.295) (-38306.015) (-38299.055) * (-38311.828) (-38309.749) [-38308.943] (-38308.960) -- 2:18:17
62000 -- [-38310.682] (-38322.035) (-38314.180) (-38305.852) * [-38302.861] (-38309.095) (-38310.379) (-38310.855) -- 2:18:10
63000 -- (-38308.038) [-38310.308] (-38303.615) (-38311.425) * [-38308.117] (-38305.490) (-38312.034) (-38310.181) -- 2:18:04
64000 -- [-38307.060] (-38321.345) (-38307.684) (-38299.344) * (-38318.690) [-38303.186] (-38308.899) (-38303.974) -- 2:17:57
65000 -- (-38318.408) (-38304.484) [-38298.194] (-38306.821) * (-38312.664) (-38305.781) [-38304.694] (-38315.749) -- 2:17:51
Average standard deviation of split frequencies: 0.016071
66000 -- (-38306.906) [-38304.155] (-38296.458) (-38302.548) * (-38303.652) (-38313.062) [-38303.393] (-38312.676) -- 2:17:30
67000 -- (-38317.698) (-38309.090) (-38304.832) [-38300.015] * (-38308.309) (-38303.223) (-38306.628) [-38305.085] -- 2:17:23
68000 -- (-38297.427) [-38306.797] (-38312.765) (-38306.029) * (-38302.600) (-38318.080) (-38309.944) [-38296.078] -- 2:17:17
69000 -- [-38301.274] (-38302.470) (-38311.305) (-38304.878) * (-38301.490) (-38308.070) (-38310.684) [-38300.375] -- 2:17:10
70000 -- (-38317.732) (-38302.502) [-38293.547] (-38309.622) * (-38306.884) (-38315.779) (-38307.397) [-38305.834] -- 2:17:03
Average standard deviation of split frequencies: 0.013759
71000 -- (-38306.641) [-38301.034] (-38308.063) (-38306.329) * (-38306.705) [-38310.122] (-38316.677) (-38313.448) -- 2:16:43
72000 -- (-38305.199) [-38307.506] (-38301.002) (-38314.499) * (-38305.317) (-38311.080) (-38309.611) [-38307.256] -- 2:16:37
73000 -- (-38302.304) (-38311.648) [-38296.533] (-38307.089) * (-38314.318) [-38300.507] (-38306.843) (-38303.209) -- 2:16:30
74000 -- (-38312.497) [-38300.621] (-38298.087) (-38323.926) * (-38304.604) [-38296.947] (-38307.275) (-38307.988) -- 2:16:23
75000 -- (-38305.434) (-38315.517) [-38294.710] (-38313.952) * (-38302.645) [-38302.418] (-38308.419) (-38306.762) -- 2:16:17
Average standard deviation of split frequencies: 0.011630
76000 -- (-38315.397) (-38302.439) (-38312.390) [-38300.818] * [-38294.699] (-38313.688) (-38313.823) (-38310.711) -- 2:16:10
77000 -- (-38319.794) (-38307.488) [-38313.560] (-38307.221) * (-38307.595) (-38302.088) (-38306.523) [-38308.573] -- 2:16:03
78000 -- (-38320.256) (-38311.264) [-38305.192] (-38310.864) * (-38305.649) [-38298.312] (-38313.113) (-38307.960) -- 2:15:56
79000 -- (-38308.730) (-38304.872) [-38314.361] (-38311.801) * (-38307.458) (-38303.482) (-38311.020) [-38299.617] -- 2:15:37
80000 -- (-38303.423) (-38309.165) [-38305.994] (-38306.049) * [-38301.860] (-38307.431) (-38312.525) (-38302.468) -- 2:15:30
Average standard deviation of split frequencies: 0.010592
81000 -- (-38303.909) [-38303.671] (-38305.060) (-38315.665) * [-38321.440] (-38306.436) (-38307.142) (-38309.680) -- 2:15:23
82000 -- (-38309.596) [-38296.249] (-38307.712) (-38300.628) * (-38310.192) (-38310.031) (-38313.978) [-38302.149] -- 2:15:16
83000 -- [-38301.253] (-38304.589) (-38310.499) (-38300.969) * [-38307.152] (-38310.040) (-38313.131) (-38307.804) -- 2:14:58
84000 -- (-38312.794) (-38310.500) (-38313.267) [-38314.401] * [-38304.255] (-38310.933) (-38311.534) (-38306.443) -- 2:14:51
85000 -- (-38322.096) [-38304.411] (-38309.985) (-38309.908) * (-38311.888) [-38315.122] (-38308.975) (-38299.730) -- 2:14:44
Average standard deviation of split frequencies: 0.007537
86000 -- [-38300.908] (-38302.469) (-38303.353) (-38310.018) * (-38308.619) (-38301.302) [-38305.219] (-38304.325) -- 2:14:37
87000 -- (-38303.726) (-38302.071) (-38303.023) [-38302.237] * (-38307.600) (-38299.331) (-38298.992) [-38296.678] -- 2:14:30
88000 -- (-38311.891) (-38317.151) (-38298.559) [-38298.477] * (-38306.676) (-38300.816) [-38309.192] (-38309.785) -- 2:14:22
89000 -- (-38304.163) [-38305.473] (-38306.790) (-38308.237) * (-38301.139) [-38300.835] (-38314.911) (-38306.271) -- 2:14:05
90000 -- (-38298.785) [-38298.206] (-38304.766) (-38306.023) * (-38301.116) [-38297.757] (-38300.559) (-38313.855) -- 2:13:58
Average standard deviation of split frequencies: 0.006824
91000 -- (-38306.588) [-38306.455] (-38313.468) (-38312.566) * (-38316.742) (-38305.070) (-38319.129) [-38299.366] -- 2:13:51
92000 -- (-38305.451) [-38300.984] (-38309.918) (-38309.385) * (-38313.657) (-38301.991) (-38299.572) [-38302.427] -- 2:13:34
93000 -- (-38309.079) [-38308.872] (-38307.070) (-38306.865) * (-38310.909) [-38311.151] (-38313.630) (-38308.350) -- 2:13:26
94000 -- (-38301.844) (-38304.956) [-38307.944] (-38302.672) * [-38311.021] (-38309.255) (-38298.815) (-38304.410) -- 2:13:19
95000 -- (-38306.209) [-38298.508] (-38304.921) (-38309.191) * (-38308.383) (-38315.632) [-38307.984] (-38312.503) -- 2:13:12
Average standard deviation of split frequencies: 0.005524
96000 -- (-38305.004) (-38306.704) [-38303.430] (-38307.912) * [-38309.591] (-38303.965) (-38309.501) (-38301.004) -- 2:13:05
97000 -- (-38306.444) [-38298.863] (-38313.429) (-38313.380) * [-38301.728] (-38299.354) (-38320.699) (-38304.126) -- 2:12:58
98000 -- (-38318.185) [-38305.327] (-38310.757) (-38314.739) * (-38312.880) [-38300.210] (-38305.672) (-38303.047) -- 2:12:41
99000 -- (-38310.486) (-38305.512) (-38310.282) [-38304.632] * (-38310.235) [-38308.659] (-38309.779) (-38305.419) -- 2:12:34
100000 -- (-38314.716) [-38310.522] (-38301.539) (-38306.943) * (-38307.790) (-38318.680) [-38298.949] (-38307.914) -- 2:12:26
Average standard deviation of split frequencies: 0.004097
101000 -- [-38312.337] (-38310.678) (-38300.031) (-38310.704) * (-38307.781) [-38307.097] (-38311.288) (-38302.988) -- 2:12:19
102000 -- [-38303.041] (-38309.357) (-38310.223) (-38305.854) * (-38301.449) (-38309.572) (-38303.840) [-38302.965] -- 2:12:12
103000 -- (-38303.593) (-38301.207) (-38309.394) [-38303.170] * [-38299.232] (-38303.760) (-38308.744) (-38307.512) -- 2:12:04
104000 -- [-38303.065] (-38314.159) (-38304.540) (-38304.064) * (-38308.414) (-38320.486) (-38297.863) [-38308.038] -- 2:11:57
105000 -- (-38314.878) (-38312.152) [-38310.802] (-38308.706) * (-38308.029) [-38310.528] (-38297.606) (-38305.120) -- 2:11:50
Average standard deviation of split frequencies: 0.003613
106000 -- (-38301.902) [-38303.204] (-38311.165) (-38303.908) * (-38305.418) [-38305.337] (-38315.825) (-38305.725) -- 2:11:42
107000 -- (-38311.005) (-38316.658) [-38305.296] (-38300.263) * (-38313.447) (-38308.105) (-38309.577) [-38303.526] -- 2:11:35
108000 -- (-38305.525) (-38311.616) [-38301.164] (-38312.420) * [-38307.653] (-38304.343) (-38305.856) (-38303.481) -- 2:11:19
109000 -- (-38313.346) (-38316.552) [-38297.205] (-38317.961) * [-38302.251] (-38305.808) (-38314.463) (-38303.055) -- 2:11:11
110000 -- (-38310.742) (-38318.559) [-38303.354] (-38316.398) * (-38311.681) [-38305.712] (-38313.086) (-38306.890) -- 2:11:04
Average standard deviation of split frequencies: 0.002929
111000 -- (-38308.100) (-38316.084) (-38298.870) [-38308.085] * (-38303.461) (-38306.697) (-38315.210) [-38304.734] -- 2:10:56
112000 -- [-38317.414] (-38310.636) (-38303.034) (-38315.112) * [-38299.111] (-38312.151) (-38315.853) (-38313.739) -- 2:10:49
113000 -- (-38310.380) (-38310.725) [-38302.591] (-38310.959) * (-38296.439) [-38299.681] (-38305.530) (-38308.588) -- 2:10:33
114000 -- (-38312.360) (-38302.786) [-38306.587] (-38310.091) * (-38308.319) (-38304.094) [-38305.538] (-38313.302) -- 2:10:26
115000 -- (-38315.243) (-38303.764) [-38308.695] (-38298.912) * [-38306.478] (-38307.859) (-38308.449) (-38316.011) -- 2:10:18
Average standard deviation of split frequencies: 0.002032
116000 -- (-38310.128) [-38309.004] (-38320.823) (-38305.670) * [-38302.934] (-38307.066) (-38307.242) (-38310.580) -- 2:10:11
117000 -- (-38309.831) (-38306.040) (-38312.834) [-38302.256] * (-38306.702) (-38319.498) (-38310.706) [-38306.614] -- 2:09:56
118000 -- (-38303.682) (-38310.692) [-38302.614] (-38300.490) * (-38303.410) (-38317.980) [-38307.064] (-38313.922) -- 2:09:48
119000 -- (-38310.139) (-38309.609) (-38308.031) [-38308.658] * [-38314.309] (-38302.082) (-38314.504) (-38296.596) -- 2:09:40
120000 -- (-38310.826) (-38311.678) (-38304.243) [-38300.647] * (-38298.582) [-38305.209] (-38312.299) (-38305.831) -- 2:09:33
Average standard deviation of split frequencies: 0.002686
121000 -- (-38328.310) (-38321.880) (-38310.516) [-38306.810] * [-38309.016] (-38306.499) (-38300.454) (-38310.429) -- 2:09:18
122000 -- (-38311.844) (-38308.590) [-38306.246] (-38307.608) * (-38306.351) (-38310.931) [-38305.247] (-38313.189) -- 2:09:10
123000 -- (-38317.336) (-38304.821) (-38310.126) [-38307.415] * (-38304.470) (-38305.249) [-38308.296] (-38312.622) -- 2:09:03
124000 -- [-38301.560] (-38304.314) (-38325.430) (-38306.455) * (-38306.002) (-38311.549) [-38309.750] (-38307.630) -- 2:08:55
125000 -- (-38308.164) (-38310.326) (-38312.118) [-38306.850] * (-38310.394) (-38318.944) [-38298.783] (-38307.217) -- 2:08:48
Average standard deviation of split frequencies: 0.003741
126000 -- [-38307.501] (-38312.174) (-38326.713) (-38308.801) * (-38320.640) [-38305.795] (-38306.710) (-38304.535) -- 2:08:40
127000 -- [-38308.048] (-38309.635) (-38319.143) (-38307.221) * (-38305.691) (-38309.586) [-38297.959] (-38304.350) -- 2:08:32
128000 -- (-38318.292) (-38307.928) (-38321.838) [-38307.579] * (-38314.043) (-38307.199) (-38308.458) [-38313.865] -- 2:08:24
129000 -- (-38315.583) (-38312.409) (-38305.930) [-38295.517] * [-38303.996] (-38309.734) (-38309.846) (-38307.625) -- 2:08:10
130000 -- (-38313.672) (-38313.228) (-38309.321) [-38304.894] * [-38303.347] (-38310.837) (-38310.754) (-38307.264) -- 2:08:02
Average standard deviation of split frequencies: 0.003608
131000 -- (-38296.688) (-38317.451) (-38303.034) [-38301.852] * [-38305.639] (-38302.937) (-38314.226) (-38308.703) -- 2:07:55
132000 -- (-38294.686) [-38304.137] (-38298.638) (-38303.259) * (-38300.695) (-38315.354) [-38316.040] (-38315.642) -- 2:07:47
133000 -- (-38305.255) (-38310.942) (-38302.999) [-38308.791] * (-38307.374) (-38300.549) (-38314.696) [-38302.491] -- 2:07:39
134000 -- (-38316.327) (-38303.521) [-38305.142] (-38305.135) * (-38322.797) (-38306.682) (-38305.881) [-38299.897] -- 2:07:25
135000 -- [-38312.623] (-38308.492) (-38314.415) (-38314.057) * (-38307.096) (-38320.901) (-38307.279) [-38302.413] -- 2:07:17
Average standard deviation of split frequencies: 0.003250
136000 -- (-38305.728) [-38298.407] (-38308.522) (-38312.541) * (-38310.225) (-38319.436) (-38312.053) [-38299.180] -- 2:07:09
137000 -- (-38307.274) (-38303.091) (-38318.521) [-38303.343] * (-38312.209) (-38305.615) (-38309.618) [-38300.522] -- 2:07:02
138000 -- (-38300.718) (-38319.566) (-38318.130) [-38305.590] * (-38301.350) (-38310.278) (-38309.086) [-38298.610] -- 2:06:54
139000 -- [-38308.986] (-38314.296) (-38320.663) (-38302.772) * [-38299.865] (-38304.219) (-38313.915) (-38321.350) -- 2:06:46
140000 -- [-38310.449] (-38321.219) (-38313.088) (-38300.028) * (-38300.505) [-38298.599] (-38296.255) (-38310.598) -- 2:06:38
Average standard deviation of split frequencies: 0.002932
141000 -- (-38304.942) (-38316.260) (-38301.281) [-38306.674] * (-38308.144) [-38307.578] (-38311.657) (-38304.113) -- 2:06:30
142000 -- (-38306.910) (-38307.425) [-38303.901] (-38311.733) * [-38303.971] (-38305.703) (-38331.027) (-38311.606) -- 2:06:16
143000 -- (-38303.104) (-38316.698) (-38318.040) [-38299.734] * [-38308.361] (-38306.579) (-38318.960) (-38306.889) -- 2:06:09
144000 -- (-38301.758) (-38309.976) [-38307.634] (-38298.892) * [-38299.655] (-38305.220) (-38301.064) (-38313.340) -- 2:06:01
145000 -- (-38314.576) [-38305.567] (-38305.621) (-38301.535) * (-38309.483) (-38307.882) [-38306.728] (-38309.492) -- 2:05:53
Average standard deviation of split frequencies: 0.002825
146000 -- (-38316.588) [-38307.599] (-38311.316) (-38303.646) * (-38300.589) [-38307.404] (-38308.782) (-38299.788) -- 2:05:45
147000 -- (-38305.738) (-38312.781) [-38313.531] (-38300.698) * (-38316.208) (-38312.472) (-38307.758) [-38307.596] -- 2:05:37
148000 -- (-38305.953) (-38320.427) [-38300.013] (-38305.294) * [-38300.840] (-38317.002) (-38313.305) (-38315.454) -- 2:05:29
149000 -- (-38308.078) (-38319.309) [-38304.159] (-38308.466) * (-38311.207) (-38322.224) [-38299.771] (-38311.599) -- 2:05:21
150000 -- (-38300.444) (-38307.692) [-38302.373] (-38301.186) * (-38308.936) (-38311.878) (-38308.734) [-38302.962] -- 2:05:08
Average standard deviation of split frequencies: 0.002738
151000 -- [-38309.198] (-38313.721) (-38308.983) (-38304.263) * [-38310.843] (-38305.083) (-38311.145) (-38298.067) -- 2:05:00
152000 -- (-38303.734) (-38317.301) [-38308.467] (-38300.907) * (-38317.196) (-38313.642) (-38310.951) [-38301.380] -- 2:04:52
153000 -- [-38307.677] (-38297.993) (-38325.388) (-38314.321) * (-38318.878) (-38308.266) (-38302.263) [-38306.242] -- 2:04:44
154000 -- (-38301.414) (-38305.999) [-38309.412] (-38319.021) * (-38326.034) (-38314.325) [-38301.014] (-38304.175) -- 2:04:36
155000 -- (-38310.939) [-38308.347] (-38318.151) (-38311.583) * (-38314.957) (-38312.796) (-38311.147) [-38303.309] -- 2:04:28
Average standard deviation of split frequencies: 0.003022
156000 -- (-38323.241) [-38306.990] (-38315.807) (-38297.915) * (-38306.441) (-38303.736) (-38310.215) [-38300.197] -- 2:04:20
157000 -- (-38324.240) [-38310.156] (-38310.977) (-38300.600) * [-38299.589] (-38299.978) (-38306.756) (-38307.094) -- 2:04:07
158000 -- (-38315.824) [-38301.007] (-38302.144) (-38304.699) * (-38311.997) (-38319.395) (-38310.081) [-38298.439] -- 2:03:59
159000 -- (-38322.789) (-38318.002) [-38310.817] (-38304.962) * (-38312.684) (-38319.171) [-38307.630] (-38310.270) -- 2:03:51
160000 -- [-38305.520] (-38307.339) (-38312.799) (-38306.305) * (-38319.327) (-38312.274) [-38299.773] (-38306.843) -- 2:03:43
Average standard deviation of split frequencies: 0.001956
161000 -- (-38301.165) (-38304.106) [-38303.391] (-38297.834) * (-38323.588) (-38309.556) [-38299.759] (-38305.499) -- 2:03:35
162000 -- [-38306.021] (-38314.573) (-38309.479) (-38307.805) * (-38317.141) (-38297.800) (-38311.743) [-38302.445] -- 2:03:27
163000 -- [-38310.898] (-38315.230) (-38307.485) (-38311.932) * (-38318.309) (-38308.398) (-38315.555) [-38302.401] -- 2:03:19
164000 -- (-38308.290) (-38306.825) [-38300.377] (-38313.527) * (-38308.729) [-38303.672] (-38313.017) (-38306.845) -- 2:03:11
165000 -- (-38303.242) (-38327.374) [-38298.631] (-38307.994) * [-38309.523] (-38317.059) (-38318.031) (-38307.475) -- 2:03:03
Average standard deviation of split frequencies: 0.002272
166000 -- (-38302.931) (-38313.734) (-38304.071) [-38305.467] * [-38303.827] (-38309.502) (-38325.727) (-38309.750) -- 2:02:55
167000 -- (-38304.462) (-38307.374) [-38303.353] (-38315.316) * (-38303.133) (-38306.566) (-38310.660) [-38307.372] -- 2:02:47
168000 -- (-38310.306) (-38303.010) (-38309.528) [-38309.537] * [-38305.084] (-38301.565) (-38303.084) (-38305.305) -- 2:02:39
169000 -- (-38310.019) [-38306.720] (-38306.640) (-38307.599) * [-38305.646] (-38300.140) (-38302.635) (-38307.997) -- 2:02:31
170000 -- (-38311.569) (-38304.812) [-38310.911] (-38309.310) * (-38306.296) (-38305.346) [-38307.587] (-38305.906) -- 2:02:23
Average standard deviation of split frequencies: 0.002394
171000 -- [-38302.896] (-38315.692) (-38298.772) (-38310.138) * (-38315.612) [-38300.256] (-38303.519) (-38305.373) -- 2:02:14
172000 -- (-38312.653) (-38304.356) [-38305.815] (-38307.062) * (-38309.220) [-38307.665] (-38309.681) (-38295.205) -- 2:02:06
173000 -- (-38305.780) (-38307.108) [-38306.142] (-38315.146) * (-38309.278) (-38295.958) (-38305.645) [-38305.698] -- 2:01:58
174000 -- (-38331.270) (-38308.040) [-38311.608] (-38314.066) * [-38298.467] (-38301.391) (-38309.349) (-38310.154) -- 2:01:50
175000 -- (-38310.943) (-38312.908) [-38306.637] (-38319.459) * [-38301.395] (-38307.391) (-38300.539) (-38315.910) -- 2:01:37
Average standard deviation of split frequencies: 0.002321
176000 -- (-38304.895) (-38314.421) (-38308.499) [-38309.532] * (-38306.502) (-38299.815) (-38315.518) [-38310.468] -- 2:01:29
177000 -- (-38304.999) [-38301.555] (-38306.132) (-38314.202) * (-38311.292) (-38310.300) (-38310.040) [-38306.464] -- 2:01:21
178000 -- [-38306.030] (-38303.031) (-38312.294) (-38304.915) * (-38303.892) (-38313.961) [-38311.743] (-38317.099) -- 2:01:13
179000 -- (-38308.342) (-38317.655) [-38302.547] (-38308.636) * (-38307.310) (-38319.007) [-38311.343] (-38307.275) -- 2:01:05
180000 -- (-38311.419) (-38316.241) [-38302.397] (-38304.838) * (-38300.729) (-38312.633) [-38314.728] (-38308.219) -- 2:00:52
Average standard deviation of split frequencies: 0.002957
181000 -- [-38307.813] (-38310.995) (-38303.579) (-38303.856) * (-38299.322) [-38306.243] (-38304.437) (-38313.018) -- 2:00:44
182000 -- (-38320.883) (-38300.147) [-38304.848] (-38314.494) * [-38297.030] (-38302.603) (-38304.164) (-38323.185) -- 2:00:36
183000 -- [-38305.995] (-38307.097) (-38304.270) (-38297.966) * (-38317.000) (-38303.266) [-38306.442] (-38302.109) -- 2:00:27
184000 -- (-38304.193) (-38311.277) [-38301.987] (-38302.557) * (-38310.063) [-38297.899] (-38310.117) (-38299.757) -- 2:00:19
185000 -- (-38302.108) (-38313.128) [-38305.695] (-38299.261) * [-38299.606] (-38306.353) (-38320.144) (-38312.653) -- 2:00:11
Average standard deviation of split frequencies: 0.003210
186000 -- [-38304.487] (-38304.712) (-38307.691) (-38304.231) * (-38304.045) (-38319.366) (-38305.161) [-38307.566] -- 2:00:03
187000 -- (-38306.989) [-38303.072] (-38315.034) (-38310.995) * (-38304.067) [-38295.979] (-38308.721) (-38309.627) -- 1:59:50
188000 -- (-38313.349) (-38303.083) (-38307.750) [-38302.517] * [-38304.518] (-38305.946) (-38304.058) (-38317.260) -- 1:59:42
189000 -- (-38306.234) (-38308.615) (-38304.752) [-38301.402] * (-38312.382) (-38301.912) [-38304.859] (-38309.573) -- 1:59:34
190000 -- [-38308.122] (-38309.367) (-38312.432) (-38296.224) * (-38308.039) (-38303.332) (-38321.395) [-38302.778] -- 1:59:26
Average standard deviation of split frequencies: 0.002637
191000 -- (-38319.876) [-38310.406] (-38299.984) (-38302.162) * (-38306.425) (-38303.066) (-38313.164) [-38301.205] -- 1:59:18
192000 -- (-38303.479) (-38310.566) (-38312.874) [-38307.996] * [-38296.390] (-38307.345) (-38315.828) (-38301.606) -- 1:59:09
193000 -- (-38311.591) (-38316.168) (-38318.702) [-38300.118] * (-38306.484) (-38305.605) (-38313.696) [-38304.566] -- 1:59:01
194000 -- (-38316.340) [-38308.676] (-38317.507) (-38300.428) * (-38297.849) (-38306.793) [-38302.271] (-38303.509) -- 1:58:53
195000 -- [-38301.344] (-38310.730) (-38310.643) (-38299.285) * (-38303.772) (-38311.037) (-38316.455) [-38300.120] -- 1:58:45
Average standard deviation of split frequencies: 0.002726
196000 -- (-38315.931) (-38299.902) (-38300.860) [-38303.968] * (-38304.798) (-38312.699) (-38304.675) [-38311.332] -- 1:58:32
197000 -- (-38309.533) [-38302.909] (-38307.454) (-38298.263) * (-38302.523) (-38312.082) (-38304.579) [-38307.974] -- 1:58:24
198000 -- (-38315.130) (-38305.901) (-38305.933) [-38310.363] * (-38310.659) [-38310.383] (-38313.419) (-38305.044) -- 1:58:16
199000 -- (-38301.712) [-38308.813] (-38312.676) (-38316.090) * (-38302.847) (-38314.046) [-38308.050] (-38302.970) -- 1:58:08
200000 -- (-38311.274) (-38326.816) (-38318.651) [-38295.257] * [-38307.727] (-38306.207) (-38320.107) (-38304.255) -- 1:58:00
Average standard deviation of split frequencies: 0.002662
201000 -- (-38302.927) (-38318.275) (-38306.341) [-38302.089] * (-38310.215) (-38300.859) (-38312.216) [-38307.990] -- 1:57:51
202000 -- (-38312.194) (-38302.473) (-38312.495) [-38301.483] * (-38304.018) (-38312.641) [-38299.875] (-38308.686) -- 1:57:39
203000 -- (-38307.967) (-38306.066) (-38310.691) [-38302.460] * (-38305.237) (-38317.030) [-38298.003] (-38313.119) -- 1:57:31
204000 -- (-38314.565) (-38308.007) (-38300.043) [-38304.877] * (-38309.013) (-38316.419) (-38308.678) [-38314.364] -- 1:57:23
205000 -- (-38311.654) [-38305.892] (-38302.790) (-38309.423) * (-38310.206) [-38310.509] (-38309.447) (-38305.126) -- 1:57:14
Average standard deviation of split frequencies: 0.002746
206000 -- (-38301.268) (-38323.156) [-38298.523] (-38299.181) * (-38322.529) [-38307.661] (-38324.833) (-38299.350) -- 1:57:06
207000 -- (-38300.356) (-38318.777) (-38298.605) [-38304.395] * (-38316.333) (-38307.641) [-38303.527] (-38318.049) -- 1:56:58
208000 -- (-38307.564) (-38309.692) (-38300.525) [-38310.189] * [-38302.514] (-38320.851) (-38302.546) (-38311.618) -- 1:56:49
209000 -- (-38304.490) [-38301.862] (-38302.856) (-38310.141) * (-38303.301) (-38309.907) [-38298.231] (-38313.621) -- 1:56:37
210000 -- [-38306.899] (-38303.351) (-38308.690) (-38303.894) * (-38326.650) [-38301.325] (-38302.289) (-38312.540) -- 1:56:29
Average standard deviation of split frequencies: 0.003133
211000 -- (-38309.819) (-38301.595) [-38306.747] (-38308.274) * (-38317.522) [-38301.253] (-38311.542) (-38301.963) -- 1:56:21
212000 -- (-38303.564) (-38301.722) [-38301.676] (-38309.981) * (-38305.976) (-38310.911) [-38313.489] (-38305.564) -- 1:56:13
213000 -- (-38314.682) (-38301.713) [-38299.864] (-38311.173) * (-38299.106) [-38298.826] (-38316.489) (-38313.689) -- 1:56:04
214000 -- (-38311.560) (-38316.470) (-38300.875) [-38303.484] * [-38302.216] (-38308.651) (-38308.766) (-38310.620) -- 1:55:56
215000 -- (-38307.073) (-38313.975) (-38309.309) [-38310.922] * (-38306.512) [-38301.504] (-38315.992) (-38306.426) -- 1:55:48
Average standard deviation of split frequencies: 0.003346
216000 -- (-38310.592) (-38311.032) [-38307.888] (-38307.759) * (-38300.535) (-38321.082) (-38304.586) [-38312.834] -- 1:55:39
217000 -- [-38301.962] (-38316.491) (-38303.441) (-38322.953) * [-38297.561] (-38304.022) (-38301.489) (-38312.742) -- 1:55:27
218000 -- (-38314.764) [-38308.330] (-38306.726) (-38316.189) * [-38301.716] (-38311.498) (-38303.005) (-38314.396) -- 1:55:19
219000 -- (-38310.192) (-38300.256) [-38300.114] (-38304.928) * (-38321.396) [-38303.579] (-38302.662) (-38305.324) -- 1:55:11
220000 -- (-38307.748) (-38303.983) (-38310.603) [-38302.950] * [-38306.856] (-38297.274) (-38312.839) (-38316.681) -- 1:55:03
Average standard deviation of split frequencies: 0.003276
221000 -- (-38306.590) [-38303.507] (-38300.403) (-38317.053) * [-38300.092] (-38304.033) (-38301.514) (-38307.533) -- 1:54:54
222000 -- [-38308.700] (-38307.934) (-38312.249) (-38315.824) * [-38314.575] (-38306.670) (-38308.620) (-38305.915) -- 1:54:46
223000 -- (-38306.675) (-38317.161) (-38316.095) [-38306.660] * (-38303.510) (-38315.205) [-38311.697] (-38319.280) -- 1:54:38
224000 -- [-38303.574] (-38306.150) (-38300.700) (-38319.573) * (-38312.479) (-38310.327) (-38304.716) [-38303.754] -- 1:54:29
225000 -- (-38314.570) (-38307.993) (-38311.183) [-38310.930] * (-38310.857) (-38310.546) (-38311.782) [-38302.345] -- 1:54:17
Average standard deviation of split frequencies: 0.002781
226000 -- (-38308.322) (-38308.243) [-38304.906] (-38313.790) * (-38314.674) (-38304.491) [-38306.601] (-38309.660) -- 1:54:09
227000 -- (-38313.798) [-38309.550] (-38307.034) (-38309.296) * (-38321.944) [-38301.515] (-38311.444) (-38307.250) -- 1:54:01
228000 -- [-38300.409] (-38311.957) (-38319.083) (-38312.320) * (-38338.682) (-38307.401) (-38309.716) [-38310.393] -- 1:53:52
229000 -- (-38305.953) (-38311.288) (-38320.797) [-38307.043] * [-38304.177] (-38306.416) (-38314.261) (-38300.324) -- 1:53:44
230000 -- [-38298.580] (-38304.969) (-38309.199) (-38312.440) * (-38302.720) (-38307.582) (-38300.999) [-38295.435] -- 1:53:32
Average standard deviation of split frequencies: 0.003542
231000 -- (-38301.613) (-38310.062) [-38301.326] (-38301.938) * (-38300.565) (-38304.640) (-38306.540) [-38298.270] -- 1:53:24
232000 -- (-38310.063) (-38310.389) (-38308.437) [-38304.426] * (-38306.367) (-38311.552) [-38301.935] (-38305.369) -- 1:53:16
233000 -- (-38296.678) [-38308.184] (-38311.017) (-38304.647) * (-38307.101) (-38312.998) [-38297.037] (-38302.728) -- 1:53:07
234000 -- (-38307.112) (-38317.258) (-38317.331) [-38304.610] * (-38307.712) (-38301.046) [-38312.598] (-38307.074) -- 1:52:59
235000 -- (-38302.604) (-38319.601) (-38309.594) [-38297.558] * (-38311.608) [-38318.359] (-38307.772) (-38300.381) -- 1:52:51
Average standard deviation of split frequencies: 0.004744
236000 -- (-38298.745) (-38304.540) (-38313.525) [-38302.886] * (-38316.804) (-38300.752) (-38304.105) [-38299.015] -- 1:52:42
237000 -- [-38301.074] (-38320.157) (-38306.233) (-38307.999) * (-38313.961) [-38307.773] (-38316.887) (-38301.713) -- 1:52:34
238000 -- [-38296.205] (-38323.783) (-38302.458) (-38307.560) * [-38305.552] (-38301.175) (-38314.304) (-38306.876) -- 1:52:22
239000 -- (-38299.628) (-38303.102) [-38301.249] (-38310.572) * (-38307.265) (-38297.480) (-38305.647) [-38300.404] -- 1:52:14
240000 -- [-38300.439] (-38312.599) (-38309.732) (-38311.718) * (-38314.021) (-38302.068) [-38298.131] (-38305.747) -- 1:52:06
Average standard deviation of split frequencies: 0.003656
241000 -- [-38301.425] (-38315.145) (-38312.074) (-38310.056) * (-38312.109) [-38301.941] (-38303.131) (-38302.848) -- 1:51:57
242000 -- (-38306.449) (-38307.694) (-38304.205) [-38300.620] * (-38307.007) (-38307.761) (-38304.674) [-38306.905] -- 1:51:49
243000 -- (-38307.821) (-38311.147) (-38313.458) [-38301.138] * (-38302.632) (-38302.350) [-38309.780] (-38305.453) -- 1:51:40
244000 -- (-38298.309) (-38315.427) [-38311.988] (-38326.474) * (-38319.390) (-38311.839) [-38305.557] (-38310.903) -- 1:51:32
245000 -- (-38301.045) [-38306.339] (-38306.636) (-38315.084) * (-38311.169) (-38308.396) [-38314.135] (-38302.561) -- 1:51:24
Average standard deviation of split frequencies: 0.003194
246000 -- (-38303.075) (-38307.623) (-38318.220) [-38311.723] * (-38316.587) [-38305.165] (-38310.270) (-38316.545) -- 1:51:12
247000 -- (-38299.084) (-38314.870) (-38303.115) [-38307.793] * [-38307.453] (-38313.937) (-38304.253) (-38308.927) -- 1:51:04
248000 -- (-38316.328) (-38302.332) [-38299.746] (-38300.623) * [-38303.326] (-38321.894) (-38303.713) (-38314.753) -- 1:50:55
249000 -- (-38304.083) (-38307.033) [-38299.750] (-38306.590) * (-38300.016) (-38308.862) (-38307.910) [-38310.091] -- 1:50:47
250000 -- (-38308.102) (-38315.167) [-38304.143] (-38324.811) * [-38306.772] (-38310.367) (-38318.765) (-38313.629) -- 1:50:39
Average standard deviation of split frequencies: 0.003134
251000 -- (-38314.574) (-38304.905) [-38314.088] (-38302.966) * (-38306.757) (-38299.568) (-38306.020) [-38305.574] -- 1:50:30
252000 -- (-38314.745) (-38310.042) (-38308.581) [-38305.347] * (-38308.439) (-38317.945) (-38314.055) [-38301.396] -- 1:50:22
253000 -- [-38300.290] (-38305.728) (-38313.502) (-38314.220) * (-38306.999) (-38320.949) [-38315.905] (-38305.380) -- 1:50:10
254000 -- (-38298.773) [-38309.275] (-38315.940) (-38321.493) * (-38307.098) (-38300.995) [-38301.864] (-38307.728) -- 1:50:02
255000 -- [-38296.440] (-38310.759) (-38308.789) (-38322.088) * [-38302.786] (-38306.127) (-38304.098) (-38313.760) -- 1:49:53
Average standard deviation of split frequencies: 0.003069
256000 -- (-38298.590) [-38300.828] (-38310.842) (-38302.793) * (-38311.865) [-38303.208] (-38299.990) (-38305.606) -- 1:49:45
257000 -- (-38317.916) [-38307.176] (-38314.604) (-38308.514) * (-38303.783) (-38312.134) [-38302.092] (-38308.665) -- 1:49:37
258000 -- (-38313.866) [-38315.313] (-38304.150) (-38302.674) * (-38311.433) (-38318.926) (-38308.304) [-38305.205] -- 1:49:28
259000 -- (-38314.944) [-38310.251] (-38306.172) (-38301.878) * (-38308.242) (-38305.768) [-38306.630] (-38306.212) -- 1:49:17
260000 -- (-38309.864) (-38302.875) (-38303.326) [-38304.159] * (-38312.452) (-38311.496) [-38306.866] (-38300.333) -- 1:49:09
Average standard deviation of split frequencies: 0.004634
261000 -- (-38310.578) (-38306.424) [-38298.580] (-38308.744) * (-38312.775) (-38308.647) (-38301.992) [-38301.317] -- 1:49:00
262000 -- (-38319.202) (-38308.340) [-38300.635] (-38311.339) * (-38309.725) (-38305.148) (-38307.155) [-38298.776] -- 1:48:52
263000 -- (-38308.783) [-38316.533] (-38296.047) (-38307.181) * (-38300.782) [-38312.521] (-38301.828) (-38308.115) -- 1:48:43
264000 -- [-38308.471] (-38318.450) (-38309.870) (-38307.220) * (-38315.142) [-38298.067] (-38309.203) (-38323.378) -- 1:48:35
265000 -- (-38304.931) (-38310.835) (-38317.105) [-38305.608] * (-38321.551) (-38301.440) (-38313.918) [-38301.468] -- 1:48:26
Average standard deviation of split frequencies: 0.004652
266000 -- (-38317.166) [-38311.920] (-38299.011) (-38294.729) * [-38312.303] (-38315.257) (-38314.575) (-38305.076) -- 1:48:18
267000 -- (-38314.228) (-38309.456) [-38310.796] (-38301.019) * (-38306.127) (-38321.090) (-38313.029) [-38304.187] -- 1:48:09
268000 -- (-38302.908) (-38315.586) (-38317.395) [-38295.849] * [-38308.549] (-38309.988) (-38309.247) (-38313.480) -- 1:48:01
269000 -- [-38300.768] (-38307.631) (-38307.350) (-38303.890) * [-38299.487] (-38315.127) (-38315.207) (-38315.671) -- 1:47:50
270000 -- (-38304.903) [-38303.281] (-38306.236) (-38297.170) * (-38307.586) (-38307.745) [-38313.139] (-38313.006) -- 1:47:41
Average standard deviation of split frequencies: 0.004572
271000 -- (-38320.256) (-38306.743) (-38310.824) [-38301.171] * [-38301.573] (-38314.886) (-38320.017) (-38309.560) -- 1:47:33
272000 -- [-38296.117] (-38308.866) (-38307.111) (-38304.519) * [-38305.452] (-38312.391) (-38313.678) (-38305.035) -- 1:47:24
273000 -- [-38299.582] (-38306.317) (-38305.859) (-38305.466) * (-38310.264) (-38315.320) [-38311.989] (-38318.216) -- 1:47:16
274000 -- [-38302.312] (-38309.812) (-38300.124) (-38315.013) * (-38320.118) (-38313.674) [-38305.669] (-38303.039) -- 1:47:08
275000 -- (-38299.057) (-38309.295) [-38299.388] (-38322.430) * [-38317.905] (-38306.993) (-38302.867) (-38316.586) -- 1:46:59
Average standard deviation of split frequencies: 0.005124
276000 -- (-38304.191) (-38305.719) (-38305.549) [-38307.116] * (-38321.384) (-38311.023) [-38302.739] (-38309.439) -- 1:46:51
277000 -- (-38310.293) (-38298.114) [-38303.162] (-38306.421) * [-38299.285] (-38307.585) (-38309.007) (-38304.252) -- 1:46:42
278000 -- (-38310.687) [-38303.652] (-38314.048) (-38307.560) * [-38303.859] (-38307.855) (-38309.475) (-38305.587) -- 1:46:34
279000 -- (-38315.857) [-38306.623] (-38324.779) (-38312.083) * [-38306.216] (-38309.512) (-38311.472) (-38305.742) -- 1:46:25
280000 -- (-38320.737) [-38310.065] (-38310.084) (-38318.417) * (-38320.019) (-38300.258) [-38296.684] (-38313.217) -- 1:46:14
Average standard deviation of split frequencies: 0.005039
281000 -- (-38312.926) [-38304.336] (-38311.872) (-38303.625) * [-38299.136] (-38314.987) (-38310.836) (-38306.410) -- 1:46:06
282000 -- [-38307.187] (-38300.565) (-38314.135) (-38308.364) * [-38304.841] (-38315.523) (-38304.265) (-38306.311) -- 1:45:57
283000 -- [-38301.572] (-38310.224) (-38307.453) (-38309.592) * (-38314.252) (-38319.617) [-38317.552] (-38324.181) -- 1:45:49
284000 -- (-38312.767) (-38309.341) (-38315.271) [-38305.356] * (-38306.166) [-38303.506] (-38321.659) (-38320.903) -- 1:45:40
285000 -- (-38312.116) [-38307.439] (-38315.246) (-38302.480) * [-38302.482] (-38305.964) (-38312.690) (-38310.992) -- 1:45:32
Average standard deviation of split frequencies: 0.004636
286000 -- (-38302.190) [-38303.928] (-38305.327) (-38308.932) * (-38302.325) [-38311.077] (-38302.701) (-38296.456) -- 1:45:23
287000 -- (-38320.262) (-38321.499) [-38306.158] (-38306.360) * (-38304.569) (-38309.617) (-38315.167) [-38296.983] -- 1:45:15
288000 -- (-38316.951) (-38310.109) (-38301.759) [-38306.545] * (-38308.119) [-38302.834] (-38303.687) (-38301.019) -- 1:45:06
289000 -- (-38320.700) (-38305.711) [-38301.473] (-38298.104) * (-38309.917) (-38316.522) (-38307.726) [-38304.787] -- 1:44:58
290000 -- (-38314.831) (-38308.941) (-38302.524) [-38298.399] * (-38313.630) (-38306.350) [-38302.369] (-38302.090) -- 1:44:47
Average standard deviation of split frequencies: 0.004055
291000 -- (-38306.948) (-38310.257) [-38308.341] (-38305.673) * (-38315.932) (-38298.241) [-38299.114] (-38315.658) -- 1:44:38
292000 -- (-38311.810) (-38312.373) (-38308.523) [-38303.357] * (-38299.782) [-38299.723] (-38302.867) (-38308.096) -- 1:44:30
293000 -- (-38312.134) (-38309.656) (-38311.624) [-38305.611] * (-38305.134) [-38296.884] (-38314.027) (-38298.513) -- 1:44:21
294000 -- (-38317.316) [-38304.253] (-38303.058) (-38304.822) * (-38308.957) (-38314.893) [-38314.788] (-38305.652) -- 1:44:13
295000 -- (-38310.402) [-38307.261] (-38308.037) (-38310.989) * (-38312.829) (-38298.485) [-38309.752] (-38321.410) -- 1:44:02
Average standard deviation of split frequencies: 0.003981
296000 -- [-38305.345] (-38320.931) (-38310.905) (-38306.241) * (-38304.766) [-38304.631] (-38310.045) (-38315.064) -- 1:43:53
297000 -- [-38308.753] (-38307.033) (-38311.841) (-38315.250) * (-38311.754) [-38306.124] (-38301.152) (-38327.807) -- 1:43:45
298000 -- [-38303.037] (-38319.939) (-38311.691) (-38315.969) * [-38301.760] (-38327.955) (-38301.868) (-38314.185) -- 1:43:36
299000 -- (-38314.336) (-38327.766) [-38298.513] (-38304.968) * [-38306.524] (-38305.402) (-38302.325) (-38312.001) -- 1:43:25
300000 -- (-38315.343) (-38322.462) (-38307.426) [-38297.053] * (-38308.537) (-38314.215) [-38297.238] (-38299.667) -- 1:43:17
Average standard deviation of split frequencies: 0.003528
301000 -- [-38314.842] (-38314.328) (-38301.840) (-38307.617) * (-38300.535) (-38314.224) (-38308.292) [-38300.936] -- 1:43:08
302000 -- (-38314.513) (-38313.050) (-38317.090) [-38302.956] * (-38304.906) (-38316.639) (-38328.478) [-38307.608] -- 1:43:00
303000 -- (-38305.622) (-38306.197) (-38310.854) [-38306.409] * (-38308.484) (-38312.146) (-38315.731) [-38309.463] -- 1:42:51
304000 -- [-38302.595] (-38304.455) (-38310.103) (-38296.143) * (-38301.896) [-38312.070] (-38311.337) (-38307.185) -- 1:42:40
305000 -- (-38310.166) [-38303.174] (-38311.058) (-38306.241) * (-38304.629) (-38308.109) (-38306.912) [-38305.319] -- 1:42:32
Average standard deviation of split frequencies: 0.002985
306000 -- (-38324.462) (-38299.041) [-38300.830] (-38299.319) * (-38309.064) (-38306.470) [-38300.710] (-38309.234) -- 1:42:23
307000 -- (-38311.180) (-38319.106) [-38297.777] (-38311.458) * [-38305.661] (-38302.195) (-38301.628) (-38308.143) -- 1:42:15
308000 -- (-38307.429) (-38305.999) [-38296.126] (-38308.727) * (-38302.661) (-38304.507) (-38303.693) [-38302.067] -- 1:42:06
309000 -- (-38306.607) (-38302.732) [-38304.231] (-38316.380) * (-38318.969) [-38304.934] (-38302.438) (-38305.771) -- 1:41:58
310000 -- [-38309.467] (-38304.904) (-38311.637) (-38317.106) * (-38311.431) [-38312.619] (-38309.475) (-38320.199) -- 1:41:49
Average standard deviation of split frequencies: 0.003699
311000 -- [-38309.170] (-38307.138) (-38302.814) (-38303.809) * (-38305.277) [-38313.710] (-38313.394) (-38320.966) -- 1:41:41
312000 -- (-38304.659) [-38302.884] (-38295.562) (-38311.470) * (-38296.657) (-38308.716) (-38312.626) [-38310.091] -- 1:41:30
313000 -- (-38302.191) (-38308.034) (-38306.767) [-38300.013] * [-38295.381] (-38312.672) (-38315.922) (-38315.748) -- 1:41:22
314000 -- (-38311.077) (-38308.446) [-38301.764] (-38303.441) * [-38296.298] (-38306.027) (-38317.988) (-38307.256) -- 1:41:13
315000 -- (-38311.368) (-38302.397) (-38298.608) [-38308.450] * (-38307.813) (-38304.289) (-38306.465) [-38307.396] -- 1:41:04
Average standard deviation of split frequencies: 0.003636
316000 -- (-38311.655) (-38305.049) [-38310.539] (-38316.025) * [-38304.291] (-38302.858) (-38306.041) (-38299.714) -- 1:40:56
317000 -- (-38300.560) (-38304.062) (-38310.786) [-38295.056] * [-38299.885] (-38325.542) (-38316.702) (-38306.132) -- 1:40:47
318000 -- [-38310.267] (-38303.537) (-38302.141) (-38302.096) * (-38301.877) [-38309.570] (-38312.948) (-38316.059) -- 1:40:39
319000 -- (-38306.048) (-38306.224) (-38300.332) [-38299.334] * (-38295.485) (-38303.515) (-38313.092) [-38310.581] -- 1:40:28
320000 -- [-38300.148] (-38304.306) (-38309.745) (-38309.888) * [-38293.151] (-38303.797) (-38317.349) (-38312.454) -- 1:40:20
Average standard deviation of split frequencies: 0.003400
321000 -- (-38307.591) (-38306.031) [-38298.903] (-38304.300) * (-38305.532) (-38296.222) (-38325.048) [-38302.600] -- 1:40:11
322000 -- (-38302.939) (-38305.178) [-38298.184] (-38309.835) * (-38300.269) [-38302.574] (-38324.799) (-38314.875) -- 1:40:03
323000 -- [-38302.572] (-38302.749) (-38303.055) (-38309.355) * [-38303.567] (-38305.957) (-38316.023) (-38304.616) -- 1:39:54
324000 -- (-38313.295) (-38302.964) [-38301.830] (-38311.723) * (-38306.714) (-38312.717) [-38304.373] (-38303.978) -- 1:39:45
325000 -- (-38303.394) (-38316.669) [-38302.851] (-38306.857) * (-38320.520) (-38314.105) [-38304.883] (-38307.105) -- 1:39:37
Average standard deviation of split frequencies: 0.002024
326000 -- [-38306.182] (-38298.680) (-38299.745) (-38318.763) * (-38302.232) (-38322.648) [-38302.495] (-38313.083) -- 1:39:28
327000 -- [-38302.139] (-38312.464) (-38305.671) (-38313.597) * [-38304.969] (-38302.084) (-38303.772) (-38312.845) -- 1:39:20
328000 -- [-38302.316] (-38309.071) (-38309.466) (-38308.102) * (-38305.325) [-38308.830] (-38307.265) (-38305.169) -- 1:39:11
329000 -- (-38310.816) (-38311.556) [-38301.607] (-38305.745) * (-38305.264) (-38310.920) (-38307.127) [-38302.812] -- 1:39:01
330000 -- (-38315.488) (-38311.858) (-38314.888) [-38306.166] * (-38307.637) (-38315.515) [-38304.748] (-38310.427) -- 1:38:52
Average standard deviation of split frequencies: 0.001236
331000 -- (-38315.589) (-38314.072) (-38313.907) [-38299.679] * (-38307.669) (-38298.074) [-38307.339] (-38310.719) -- 1:38:43
332000 -- (-38307.363) (-38310.892) (-38313.439) [-38304.925] * (-38314.563) [-38297.465] (-38298.647) (-38302.721) -- 1:38:35
333000 -- (-38316.319) (-38307.087) [-38303.251] (-38319.675) * [-38296.476] (-38303.796) (-38313.800) (-38306.751) -- 1:38:26
334000 -- [-38302.105] (-38321.541) (-38310.476) (-38304.740) * [-38312.359] (-38310.624) (-38318.039) (-38306.038) -- 1:38:16
335000 -- (-38300.426) [-38301.307] (-38317.303) (-38312.678) * (-38308.999) (-38311.575) (-38314.492) [-38300.221] -- 1:38:07
Average standard deviation of split frequencies: 0.000842
336000 -- (-38300.390) [-38301.846] (-38312.285) (-38311.187) * (-38315.590) [-38307.235] (-38310.227) (-38310.068) -- 1:37:59
337000 -- [-38305.225] (-38309.400) (-38310.650) (-38317.188) * (-38306.435) (-38313.165) [-38301.958] (-38302.702) -- 1:37:50
338000 -- (-38295.527) [-38305.963] (-38304.014) (-38319.062) * (-38302.327) (-38314.227) [-38306.569] (-38315.443) -- 1:37:42
339000 -- (-38303.268) (-38307.614) [-38320.348] (-38317.780) * (-38306.803) (-38302.177) [-38298.991] (-38326.570) -- 1:37:33
340000 -- (-38299.391) (-38297.829) [-38309.473] (-38312.693) * (-38311.345) [-38314.306] (-38303.367) (-38320.544) -- 1:37:22
Average standard deviation of split frequencies: 0.000738
341000 -- [-38299.063] (-38305.245) (-38305.214) (-38312.813) * (-38314.902) (-38310.991) (-38311.279) [-38303.418] -- 1:37:14
342000 -- (-38310.403) (-38297.468) (-38302.602) [-38305.291] * [-38302.896] (-38309.403) (-38318.049) (-38305.020) -- 1:37:05
343000 -- (-38308.351) [-38301.267] (-38299.040) (-38308.211) * (-38314.378) (-38308.145) (-38304.358) [-38316.703] -- 1:36:57
344000 -- [-38302.282] (-38301.841) (-38308.419) (-38300.206) * (-38300.403) [-38297.429] (-38314.184) (-38307.298) -- 1:36:46
345000 -- (-38303.379) (-38304.510) (-38307.532) [-38300.913] * (-38308.786) [-38304.289] (-38312.803) (-38297.433) -- 1:36:38
Average standard deviation of split frequencies: 0.001090
346000 -- (-38299.653) (-38306.297) (-38303.603) [-38303.680] * (-38309.562) (-38313.915) [-38311.121] (-38311.860) -- 1:36:29
347000 -- (-38306.517) [-38312.409] (-38307.096) (-38308.166) * (-38313.703) (-38306.206) (-38316.492) [-38302.311] -- 1:36:21
348000 -- (-38307.250) (-38315.373) [-38300.995] (-38305.056) * (-38305.795) (-38310.040) (-38307.279) [-38303.406] -- 1:36:10
349000 -- (-38304.577) [-38304.529] (-38313.809) (-38314.139) * (-38305.295) [-38302.380] (-38303.161) (-38301.195) -- 1:36:02
350000 -- (-38309.224) (-38301.005) (-38309.083) [-38295.189] * (-38304.840) (-38315.620) (-38309.596) [-38316.005] -- 1:35:53
Average standard deviation of split frequencies: 0.001344
351000 -- (-38309.130) [-38297.260] (-38302.094) (-38304.844) * (-38316.931) (-38307.183) (-38305.505) [-38308.296] -- 1:35:44
352000 -- (-38319.488) (-38311.917) [-38305.665] (-38305.403) * (-38322.722) [-38303.746] (-38306.543) (-38305.475) -- 1:35:36
353000 -- (-38317.564) [-38303.043] (-38298.902) (-38302.822) * (-38314.906) [-38304.043] (-38315.108) (-38303.919) -- 1:35:27
354000 -- (-38303.590) [-38299.077] (-38311.816) (-38308.493) * (-38311.386) [-38298.300] (-38312.516) (-38320.577) -- 1:35:19
355000 -- (-38308.036) (-38300.219) [-38308.748] (-38311.601) * (-38306.228) [-38301.483] (-38311.938) (-38310.772) -- 1:35:10
Average standard deviation of split frequencies: 0.000971
356000 -- [-38308.180] (-38302.926) (-38315.645) (-38309.506) * (-38315.705) (-38306.799) (-38303.241) [-38304.106] -- 1:35:01
357000 -- (-38310.625) [-38306.310] (-38307.553) (-38304.282) * (-38315.387) (-38313.546) [-38300.016] (-38305.745) -- 1:34:51
358000 -- (-38315.131) [-38298.555] (-38317.563) (-38304.526) * (-38309.153) (-38316.175) [-38300.986] (-38301.390) -- 1:34:42
359000 -- (-38313.594) (-38313.096) (-38312.440) [-38303.168] * (-38323.405) [-38313.125] (-38304.938) (-38300.727) -- 1:34:34
360000 -- (-38304.490) (-38309.187) [-38307.716] (-38305.546) * (-38311.278) [-38305.654] (-38308.318) (-38299.679) -- 1:34:25
Average standard deviation of split frequencies: 0.000784
361000 -- [-38297.668] (-38303.709) (-38312.648) (-38311.898) * (-38309.659) [-38304.077] (-38304.836) (-38300.189) -- 1:34:17
362000 -- [-38306.995] (-38304.980) (-38308.983) (-38318.736) * (-38312.018) (-38298.385) (-38306.965) [-38311.316] -- 1:34:08
363000 -- [-38311.703] (-38307.402) (-38310.615) (-38317.974) * (-38308.400) (-38304.941) (-38317.555) [-38306.682] -- 1:33:59
364000 -- (-38302.142) [-38298.592] (-38303.395) (-38310.378) * (-38315.258) (-38311.810) [-38303.253] (-38322.017) -- 1:33:49
365000 -- (-38301.233) (-38309.781) [-38310.305] (-38308.643) * (-38314.904) (-38306.223) (-38310.586) [-38306.458] -- 1:33:41
Average standard deviation of split frequencies: 0.000773
366000 -- (-38306.836) [-38303.467] (-38303.166) (-38307.327) * (-38302.551) (-38305.147) [-38301.608] (-38310.398) -- 1:33:32
367000 -- (-38307.765) (-38299.653) (-38303.092) [-38304.694] * (-38311.610) (-38304.066) (-38307.425) [-38306.443] -- 1:33:25
368000 -- (-38305.168) [-38298.279] (-38298.191) (-38318.954) * [-38306.548] (-38305.631) (-38310.030) (-38308.342) -- 1:33:16
369000 -- (-38313.530) [-38301.874] (-38302.751) (-38315.012) * [-38303.838] (-38311.347) (-38301.302) (-38303.226) -- 1:33:08
370000 -- [-38307.931] (-38312.386) (-38311.739) (-38316.603) * (-38316.449) (-38316.857) [-38298.785] (-38303.514) -- 1:32:58
Average standard deviation of split frequencies: 0.000593
371000 -- (-38316.064) (-38309.418) (-38319.821) [-38303.943] * [-38316.846] (-38310.352) (-38301.342) (-38300.014) -- 1:32:49
372000 -- (-38313.402) [-38301.700] (-38299.321) (-38303.804) * [-38307.052] (-38307.059) (-38300.886) (-38316.378) -- 1:32:40
373000 -- (-38301.840) [-38307.592] (-38308.253) (-38308.908) * (-38308.218) (-38307.716) (-38308.885) [-38304.670] -- 1:32:32
374000 -- [-38303.457] (-38304.386) (-38320.226) (-38318.455) * (-38308.191) (-38308.986) [-38306.234] (-38306.724) -- 1:32:23
375000 -- (-38307.443) (-38303.931) (-38310.557) [-38302.026] * (-38316.920) [-38302.818] (-38312.239) (-38305.491) -- 1:32:15
Average standard deviation of split frequencies: 0.000585
376000 -- (-38306.805) [-38308.970] (-38312.713) (-38301.635) * (-38305.517) (-38304.252) [-38309.382] (-38304.222) -- 1:32:06
377000 -- (-38308.845) (-38298.173) [-38308.810] (-38297.782) * (-38305.891) [-38301.090] (-38304.404) (-38307.534) -- 1:31:56
378000 -- (-38311.518) (-38308.617) (-38311.747) [-38298.020] * (-38309.716) (-38309.688) (-38308.735) [-38308.608] -- 1:31:47
379000 -- (-38302.403) [-38307.714] (-38306.874) (-38311.098) * (-38298.625) [-38309.392] (-38308.234) (-38314.535) -- 1:31:38
380000 -- [-38300.050] (-38294.662) (-38296.064) (-38314.492) * (-38302.466) [-38306.417] (-38309.450) (-38308.960) -- 1:31:30
Average standard deviation of split frequencies: 0.000743
381000 -- (-38301.124) (-38307.087) [-38310.849] (-38310.288) * (-38314.059) [-38300.241] (-38306.965) (-38309.034) -- 1:31:21
382000 -- (-38307.171) (-38302.668) (-38304.239) [-38302.848] * (-38309.871) (-38305.793) [-38299.498] (-38306.819) -- 1:31:13
383000 -- (-38305.828) (-38313.788) [-38303.975] (-38309.527) * [-38303.360] (-38310.506) (-38311.102) (-38303.625) -- 1:31:04
384000 -- (-38304.569) (-38307.465) [-38300.310] (-38314.163) * [-38303.328] (-38312.872) (-38306.872) (-38306.978) -- 1:30:55
385000 -- [-38297.861] (-38307.130) (-38302.427) (-38305.749) * (-38310.364) [-38309.671] (-38312.186) (-38320.691) -- 1:30:47
Average standard deviation of split frequencies: 0.000896
386000 -- (-38305.432) (-38308.935) [-38304.331] (-38311.164) * (-38309.122) (-38314.738) (-38311.674) [-38303.467] -- 1:30:36
387000 -- (-38317.270) (-38297.303) [-38299.951] (-38315.131) * (-38303.445) (-38308.826) (-38313.380) [-38305.601] -- 1:30:28
388000 -- (-38310.821) (-38303.204) [-38305.252] (-38308.050) * [-38305.290] (-38299.793) (-38310.590) (-38302.675) -- 1:30:19
389000 -- (-38314.454) (-38316.925) (-38304.743) [-38301.159] * (-38310.240) [-38302.540] (-38304.214) (-38311.450) -- 1:30:11
390000 -- (-38306.581) (-38305.058) [-38308.022] (-38302.548) * (-38308.548) [-38307.346] (-38305.408) (-38304.731) -- 1:30:02
Average standard deviation of split frequencies: 0.000965
391000 -- [-38300.971] (-38300.281) (-38309.835) (-38302.739) * (-38307.059) (-38311.942) (-38313.611) [-38308.298] -- 1:29:53
392000 -- (-38303.961) (-38303.663) [-38307.183] (-38313.801) * [-38299.986] (-38308.603) (-38316.378) (-38296.760) -- 1:29:43
393000 -- (-38311.681) (-38303.524) (-38304.990) [-38301.147] * (-38314.129) (-38314.663) (-38313.266) [-38305.185] -- 1:29:34
394000 -- (-38310.927) (-38303.866) (-38310.167) [-38303.329] * (-38308.377) (-38316.970) (-38305.251) [-38302.225] -- 1:29:26
395000 -- (-38307.518) (-38303.480) (-38307.234) [-38299.735] * (-38298.765) [-38309.446] (-38300.203) (-38312.937) -- 1:29:17
Average standard deviation of split frequencies: 0.000952
396000 -- (-38310.823) (-38310.128) (-38306.048) [-38301.111] * (-38308.734) (-38317.671) [-38301.295] (-38317.599) -- 1:29:09
397000 -- [-38305.060] (-38310.309) (-38314.714) (-38310.174) * (-38297.612) (-38305.902) (-38299.328) [-38308.228] -- 1:28:58
398000 -- [-38296.817] (-38316.779) (-38310.589) (-38311.098) * (-38302.863) (-38309.986) [-38299.130] (-38315.773) -- 1:28:50
399000 -- [-38303.905] (-38315.138) (-38316.900) (-38305.768) * (-38298.425) [-38305.148] (-38318.288) (-38328.985) -- 1:28:41
400000 -- (-38301.537) [-38301.996] (-38312.260) (-38309.631) * [-38307.087] (-38299.903) (-38302.675) (-38313.986) -- 1:28:33
Average standard deviation of split frequencies: 0.000706
401000 -- [-38303.382] (-38312.007) (-38304.594) (-38308.972) * (-38308.761) [-38307.513] (-38300.851) (-38306.863) -- 1:28:24
402000 -- (-38307.685) (-38310.515) [-38296.915] (-38312.078) * (-38316.347) (-38311.347) [-38300.899] (-38295.015) -- 1:28:15
403000 -- [-38302.870] (-38304.228) (-38317.245) (-38316.445) * (-38316.833) (-38308.138) [-38302.640] (-38303.153) -- 1:28:07
404000 -- [-38298.225] (-38314.961) (-38321.430) (-38311.793) * (-38313.373) (-38308.631) [-38300.977] (-38315.785) -- 1:27:58
405000 -- [-38313.398] (-38303.767) (-38318.031) (-38301.774) * (-38321.484) (-38301.970) [-38296.452] (-38304.053) -- 1:27:48
Average standard deviation of split frequencies: 0.000774
406000 -- [-38301.563] (-38316.317) (-38320.077) (-38303.908) * (-38305.369) [-38312.421] (-38306.139) (-38305.449) -- 1:27:39
407000 -- (-38308.589) (-38309.846) (-38311.680) [-38306.751] * (-38313.402) (-38312.294) (-38304.992) [-38303.169] -- 1:27:31
408000 -- (-38304.315) (-38307.376) [-38300.140] (-38326.147) * (-38313.014) (-38315.273) (-38305.935) [-38304.770] -- 1:27:22
409000 -- (-38308.449) [-38307.580] (-38312.454) (-38309.497) * (-38321.697) [-38306.015] (-38317.521) (-38312.570) -- 1:27:13
410000 -- (-38316.492) (-38311.055) (-38300.410) [-38302.900] * (-38317.053) (-38325.972) (-38307.255) [-38303.046] -- 1:27:05
Average standard deviation of split frequencies: 0.000765
411000 -- (-38300.602) (-38315.424) [-38301.397] (-38305.474) * (-38326.392) (-38321.618) (-38303.151) [-38299.554] -- 1:26:56
412000 -- [-38296.194] (-38315.259) (-38301.606) (-38311.137) * (-38320.429) (-38311.284) (-38311.929) [-38296.173] -- 1:26:47
413000 -- [-38297.942] (-38316.164) (-38309.260) (-38303.934) * (-38310.776) (-38306.479) (-38302.228) [-38297.732] -- 1:26:39
414000 -- (-38297.926) (-38296.289) [-38299.738] (-38306.916) * (-38300.452) [-38301.162] (-38310.433) (-38301.032) -- 1:26:30
415000 -- (-38301.472) (-38305.596) [-38307.553] (-38305.269) * (-38300.968) (-38304.440) (-38311.103) [-38313.456] -- 1:26:20
Average standard deviation of split frequencies: 0.000755
416000 -- [-38297.568] (-38307.891) (-38313.679) (-38304.038) * (-38309.154) (-38310.488) [-38311.623] (-38308.612) -- 1:26:11
417000 -- (-38317.394) (-38314.362) [-38296.271] (-38296.783) * [-38301.299] (-38302.907) (-38311.078) (-38314.721) -- 1:26:03
418000 -- [-38314.641] (-38312.990) (-38310.196) (-38299.479) * (-38300.838) [-38299.764] (-38314.691) (-38302.821) -- 1:25:54
419000 -- (-38305.283) (-38306.726) (-38304.881) [-38305.698] * (-38299.626) [-38304.638] (-38317.890) (-38307.378) -- 1:25:45
420000 -- (-38307.755) (-38305.682) [-38313.464] (-38319.668) * (-38318.531) [-38313.435] (-38305.937) (-38304.901) -- 1:25:37
Average standard deviation of split frequencies: 0.000747
421000 -- [-38296.650] (-38301.096) (-38299.088) (-38303.960) * (-38312.421) (-38301.635) [-38303.173] (-38319.068) -- 1:25:28
422000 -- (-38302.681) (-38302.411) [-38296.808] (-38308.752) * [-38304.353] (-38301.254) (-38316.931) (-38302.716) -- 1:25:19
423000 -- (-38313.478) [-38309.679] (-38313.671) (-38305.085) * (-38303.135) (-38309.219) (-38311.509) [-38298.239] -- 1:25:11
424000 -- (-38306.678) (-38304.467) [-38309.435] (-38308.324) * (-38310.212) [-38303.116] (-38302.849) (-38304.386) -- 1:25:02
425000 -- [-38302.355] (-38304.610) (-38310.912) (-38295.593) * (-38311.628) (-38307.840) [-38313.793] (-38316.590) -- 1:24:53
Average standard deviation of split frequencies: 0.000811
426000 -- (-38305.876) (-38294.828) (-38317.341) [-38300.946] * (-38308.224) [-38306.098] (-38308.727) (-38298.772) -- 1:24:43
427000 -- (-38308.271) (-38313.682) (-38312.108) [-38303.340] * (-38306.219) (-38307.692) [-38302.805] (-38309.451) -- 1:24:35
428000 -- [-38302.244] (-38319.432) (-38307.465) (-38313.121) * [-38306.151] (-38304.323) (-38300.732) (-38299.875) -- 1:24:26
429000 -- [-38307.323] (-38313.643) (-38304.215) (-38311.133) * (-38316.886) (-38308.992) [-38303.710] (-38309.528) -- 1:24:17
430000 -- (-38312.225) (-38314.691) (-38312.347) [-38301.332] * (-38298.112) (-38318.455) [-38302.461] (-38307.560) -- 1:24:09
Average standard deviation of split frequencies: 0.000803
431000 -- (-38307.709) [-38308.425] (-38317.621) (-38315.987) * (-38311.045) [-38313.095] (-38313.664) (-38302.785) -- 1:24:00
432000 -- [-38303.282] (-38302.763) (-38306.999) (-38312.477) * [-38298.013] (-38315.566) (-38312.457) (-38306.415) -- 1:23:51
433000 -- (-38310.981) (-38309.174) [-38304.113] (-38299.332) * [-38299.339] (-38315.986) (-38307.595) (-38303.208) -- 1:23:43
434000 -- (-38308.537) (-38314.100) (-38307.800) [-38300.530] * (-38318.493) [-38302.473] (-38306.926) (-38300.590) -- 1:23:34
435000 -- (-38312.979) (-38316.764) (-38310.851) [-38297.054] * (-38311.035) [-38298.889] (-38306.482) (-38303.129) -- 1:23:25
Average standard deviation of split frequencies: 0.000865
436000 -- (-38310.421) (-38318.602) (-38310.590) [-38297.030] * (-38316.228) [-38299.268] (-38307.663) (-38308.257) -- 1:23:17
437000 -- (-38306.866) (-38310.349) (-38320.544) [-38295.961] * (-38305.996) (-38315.376) [-38301.342] (-38309.471) -- 1:23:08
438000 -- (-38316.120) (-38303.304) (-38312.243) [-38299.627] * [-38303.672] (-38304.470) (-38299.333) (-38307.175) -- 1:22:58
439000 -- (-38307.370) (-38306.439) (-38305.073) [-38298.676] * (-38314.598) [-38299.325] (-38310.597) (-38311.810) -- 1:22:49
440000 -- (-38309.235) [-38308.602] (-38301.185) (-38304.150) * (-38311.790) [-38313.608] (-38303.966) (-38303.475) -- 1:22:41
Average standard deviation of split frequencies: 0.000713
441000 -- [-38295.432] (-38304.878) (-38308.465) (-38311.622) * (-38301.764) (-38301.160) [-38307.254] (-38311.612) -- 1:22:32
442000 -- (-38307.506) (-38307.314) [-38302.216] (-38306.790) * (-38309.626) [-38301.249] (-38309.073) (-38305.749) -- 1:22:23
443000 -- (-38309.697) (-38300.511) [-38302.749] (-38309.107) * (-38311.933) (-38310.546) (-38311.415) [-38301.787] -- 1:22:15
444000 -- (-38313.311) [-38303.858] (-38305.029) (-38307.276) * [-38311.652] (-38313.680) (-38302.374) (-38310.376) -- 1:22:06
445000 -- [-38305.054] (-38304.155) (-38308.218) (-38304.549) * (-38318.890) [-38304.237] (-38301.941) (-38312.733) -- 1:21:57
Average standard deviation of split frequencies: 0.000634
446000 -- (-38308.280) (-38313.724) [-38300.808] (-38305.271) * [-38306.702] (-38307.443) (-38306.614) (-38305.703) -- 1:21:48
447000 -- [-38313.319] (-38308.607) (-38311.800) (-38298.397) * (-38312.365) (-38304.283) (-38314.538) [-38308.700] -- 1:21:40
448000 -- (-38317.356) (-38309.446) [-38312.683] (-38297.290) * (-38308.364) (-38314.827) (-38321.068) [-38308.075] -- 1:21:31
449000 -- (-38309.237) [-38308.811] (-38300.105) (-38301.922) * [-38302.051] (-38306.063) (-38319.104) (-38304.308) -- 1:21:21
450000 -- (-38309.577) (-38307.969) (-38310.390) [-38296.306] * (-38296.461) [-38302.040] (-38307.838) (-38312.997) -- 1:21:13
Average standard deviation of split frequencies: 0.000558
451000 -- (-38314.742) [-38305.456] (-38313.056) (-38301.293) * (-38314.776) (-38313.609) (-38308.342) [-38303.010] -- 1:21:04
452000 -- (-38303.759) (-38307.443) [-38309.443] (-38295.678) * (-38305.194) (-38313.602) (-38309.406) [-38302.636] -- 1:20:55
453000 -- (-38307.733) (-38306.149) [-38300.110] (-38300.517) * (-38309.950) (-38307.879) (-38317.781) [-38311.830] -- 1:20:46
454000 -- (-38312.579) (-38304.218) (-38314.027) [-38307.009] * (-38310.687) (-38316.943) [-38300.396] (-38304.041) -- 1:20:38
455000 -- (-38309.412) (-38302.252) (-38305.246) [-38303.093] * (-38307.311) (-38316.574) [-38307.588] (-38305.830) -- 1:20:29
Average standard deviation of split frequencies: 0.000482
456000 -- [-38312.894] (-38299.466) (-38309.949) (-38307.280) * (-38314.065) (-38305.377) [-38308.163] (-38311.478) -- 1:20:20
457000 -- (-38310.532) (-38308.483) (-38312.678) [-38305.324] * (-38307.076) (-38309.887) [-38300.538] (-38311.526) -- 1:20:10
458000 -- (-38306.520) (-38306.706) (-38309.713) [-38309.078] * (-38311.324) (-38309.297) [-38308.724] (-38310.070) -- 1:20:02
459000 -- [-38297.140] (-38311.269) (-38305.719) (-38309.207) * (-38306.891) (-38307.270) (-38313.283) [-38306.998] -- 1:19:53
460000 -- (-38306.909) (-38310.028) [-38307.289] (-38308.781) * (-38302.270) (-38302.765) [-38303.791] (-38324.642) -- 1:19:44
Average standard deviation of split frequencies: 0.000341
461000 -- [-38305.187] (-38316.319) (-38313.127) (-38313.538) * (-38305.712) (-38304.225) [-38297.361] (-38328.039) -- 1:19:35
462000 -- (-38304.471) (-38307.652) (-38310.368) [-38313.940] * (-38303.129) [-38301.107] (-38304.949) (-38312.464) -- 1:19:26
463000 -- (-38304.817) [-38302.616] (-38317.058) (-38308.111) * (-38314.819) [-38307.805] (-38312.796) (-38313.856) -- 1:19:17
464000 -- (-38307.657) (-38314.634) [-38297.800] (-38299.835) * [-38305.528] (-38312.673) (-38311.963) (-38302.814) -- 1:19:08
465000 -- (-38314.574) (-38302.378) [-38299.740] (-38301.278) * (-38303.885) (-38308.342) [-38300.595] (-38303.000) -- 1:19:00
Average standard deviation of split frequencies: 0.000405
466000 -- (-38312.418) (-38305.158) [-38305.738] (-38306.662) * (-38305.899) [-38302.526] (-38311.330) (-38301.087) -- 1:18:50
467000 -- (-38308.814) (-38301.354) (-38303.038) [-38305.545] * (-38308.404) [-38297.617] (-38315.994) (-38312.247) -- 1:18:41
468000 -- [-38296.732] (-38317.120) (-38307.184) (-38308.111) * (-38314.939) (-38303.965) [-38309.381] (-38311.353) -- 1:18:32
469000 -- [-38299.069] (-38321.396) (-38307.582) (-38305.096) * (-38315.423) (-38311.256) [-38307.213] (-38311.429) -- 1:18:24
470000 -- [-38301.306] (-38301.823) (-38304.195) (-38298.705) * [-38305.208] (-38301.706) (-38324.724) (-38311.293) -- 1:18:15
Average standard deviation of split frequencies: 0.000334
471000 -- (-38309.792) [-38308.992] (-38311.833) (-38306.783) * (-38305.299) [-38309.659] (-38308.726) (-38307.947) -- 1:18:06
472000 -- (-38307.317) (-38306.556) (-38312.867) [-38297.893] * [-38299.927] (-38321.003) (-38305.707) (-38303.018) -- 1:17:58
473000 -- (-38317.295) (-38300.605) (-38310.125) [-38300.182] * (-38300.520) (-38311.830) [-38304.802] (-38303.983) -- 1:17:49
474000 -- (-38309.124) (-38312.898) (-38316.914) [-38297.677] * [-38313.641] (-38309.106) (-38311.314) (-38299.380) -- 1:17:40
475000 -- (-38304.094) (-38314.583) (-38307.364) [-38304.485] * (-38302.449) (-38315.619) (-38311.375) [-38296.046] -- 1:17:32
Average standard deviation of split frequencies: 0.000528
476000 -- (-38300.931) (-38308.711) [-38302.544] (-38303.245) * (-38307.171) (-38314.456) (-38307.865) [-38296.728] -- 1:17:23
477000 -- (-38303.758) (-38317.164) [-38302.441] (-38303.159) * [-38307.122] (-38313.602) (-38313.904) (-38306.955) -- 1:17:13
478000 -- (-38306.656) (-38302.790) (-38309.370) [-38304.542] * (-38306.574) (-38294.932) (-38305.286) [-38297.344] -- 1:17:04
479000 -- [-38308.585] (-38324.347) (-38300.057) (-38305.366) * (-38312.643) [-38303.070] (-38306.798) (-38306.022) -- 1:16:56
480000 -- (-38298.377) (-38304.547) [-38301.272] (-38318.437) * (-38318.935) (-38299.235) [-38301.334] (-38325.927) -- 1:16:47
Average standard deviation of split frequencies: 0.000719
481000 -- (-38307.745) (-38307.131) (-38306.859) [-38307.171] * (-38311.253) (-38308.199) (-38320.131) [-38300.455] -- 1:16:38
482000 -- (-38305.825) (-38309.910) [-38304.551] (-38307.377) * [-38309.585] (-38308.511) (-38308.501) (-38312.295) -- 1:16:29
483000 -- [-38299.354] (-38305.422) (-38309.387) (-38302.748) * (-38302.990) (-38319.936) [-38307.221] (-38305.345) -- 1:16:21
484000 -- (-38312.338) (-38307.956) [-38303.381] (-38320.063) * [-38306.508] (-38309.440) (-38307.187) (-38311.465) -- 1:16:12
485000 -- (-38307.811) (-38306.741) [-38304.476] (-38306.915) * (-38309.366) (-38300.586) [-38302.969] (-38307.983) -- 1:16:03
Average standard deviation of split frequencies: 0.000647
486000 -- (-38322.756) (-38309.815) [-38298.186] (-38310.495) * (-38307.620) [-38305.608] (-38315.786) (-38312.361) -- 1:15:55
487000 -- (-38317.965) [-38299.985] (-38298.102) (-38302.791) * (-38305.680) [-38303.386] (-38319.745) (-38312.490) -- 1:15:45
488000 -- (-38320.430) [-38306.479] (-38301.748) (-38300.890) * (-38305.387) (-38305.176) [-38303.414] (-38304.819) -- 1:15:36
489000 -- [-38299.144] (-38311.478) (-38304.420) (-38302.907) * [-38304.292] (-38318.830) (-38318.727) (-38303.047) -- 1:15:27
490000 -- (-38318.656) (-38318.047) [-38308.458] (-38320.577) * (-38316.056) [-38302.750] (-38306.322) (-38304.839) -- 1:15:19
Average standard deviation of split frequencies: 0.000448
491000 -- (-38306.920) (-38318.120) (-38302.882) [-38313.900] * (-38318.939) [-38300.833] (-38310.442) (-38318.001) -- 1:15:10
492000 -- (-38298.534) (-38312.389) (-38299.648) [-38311.272] * (-38306.956) [-38305.857] (-38307.039) (-38316.494) -- 1:15:01
493000 -- [-38304.686] (-38327.375) (-38313.765) (-38311.155) * (-38311.749) (-38316.276) (-38308.849) [-38317.772] -- 1:14:53
494000 -- (-38302.141) [-38304.639] (-38310.511) (-38304.565) * (-38303.558) (-38303.833) (-38304.420) [-38305.478] -- 1:14:44
495000 -- (-38306.719) (-38318.526) [-38305.901] (-38307.419) * (-38297.767) (-38315.391) (-38313.672) [-38307.738] -- 1:14:35
Average standard deviation of split frequencies: 0.000317
496000 -- [-38300.581] (-38315.220) (-38303.354) (-38305.213) * (-38313.174) (-38314.332) (-38318.947) [-38303.660] -- 1:14:26
497000 -- [-38298.595] (-38319.683) (-38299.568) (-38310.088) * (-38306.343) (-38308.935) (-38306.587) [-38313.834] -- 1:14:17
498000 -- (-38302.141) (-38305.622) [-38307.797] (-38311.548) * (-38311.021) [-38305.651] (-38318.289) (-38306.031) -- 1:14:08
499000 -- (-38303.146) (-38310.177) [-38303.447] (-38311.288) * [-38299.024] (-38311.496) (-38310.546) (-38308.625) -- 1:13:59
500000 -- (-38308.823) (-38313.165) [-38295.976] (-38310.856) * [-38301.286] (-38312.978) (-38317.162) (-38305.509) -- 1:13:51
Average standard deviation of split frequencies: 0.000502
501000 -- (-38310.195) (-38311.762) [-38314.549] (-38314.647) * (-38304.456) (-38311.701) [-38304.640] (-38317.547) -- 1:13:42
502000 -- (-38302.110) (-38317.904) (-38310.411) [-38307.679] * (-38306.025) [-38299.055] (-38300.256) (-38320.244) -- 1:13:33
503000 -- [-38301.870] (-38314.804) (-38301.337) (-38310.938) * (-38307.555) (-38303.277) (-38311.009) [-38303.666] -- 1:13:24
504000 -- (-38304.637) [-38302.646] (-38308.078) (-38303.297) * (-38302.639) (-38308.712) [-38307.294] (-38317.545) -- 1:13:16
505000 -- (-38305.372) (-38304.659) (-38315.761) [-38308.275] * [-38298.683] (-38301.812) (-38308.742) (-38307.708) -- 1:13:07
Average standard deviation of split frequencies: 0.000248
506000 -- (-38308.422) [-38303.227] (-38303.867) (-38312.023) * [-38304.535] (-38304.337) (-38299.981) (-38307.845) -- 1:12:58
507000 -- [-38298.080] (-38315.896) (-38300.014) (-38316.559) * [-38297.582] (-38304.734) (-38298.100) (-38302.760) -- 1:12:48
508000 -- (-38306.939) [-38306.534] (-38312.353) (-38306.014) * [-38307.512] (-38308.591) (-38308.864) (-38313.397) -- 1:12:40
509000 -- (-38309.768) (-38310.771) (-38312.619) [-38307.321] * (-38317.427) [-38298.197] (-38312.443) (-38310.964) -- 1:12:31
510000 -- (-38303.696) (-38308.543) [-38299.166] (-38301.512) * [-38302.512] (-38304.429) (-38313.407) (-38313.097) -- 1:12:22
Average standard deviation of split frequencies: 0.000308
511000 -- (-38309.826) (-38312.683) [-38299.595] (-38309.387) * (-38307.496) [-38307.508] (-38313.007) (-38313.198) -- 1:12:13
512000 -- (-38308.511) [-38315.016] (-38311.693) (-38310.583) * (-38310.358) (-38305.734) (-38313.003) [-38297.850] -- 1:12:04
513000 -- (-38310.001) (-38308.474) [-38301.452] (-38306.124) * (-38305.759) [-38297.533] (-38308.347) (-38305.849) -- 1:11:55
514000 -- (-38317.095) (-38307.366) (-38302.391) [-38301.434] * (-38311.989) [-38301.218] (-38303.430) (-38305.121) -- 1:11:46
515000 -- (-38306.379) (-38307.051) [-38310.308] (-38298.153) * (-38308.633) (-38309.692) [-38298.869] (-38302.908) -- 1:11:38
Average standard deviation of split frequencies: 0.000365
516000 -- [-38301.041] (-38313.412) (-38305.234) (-38308.018) * (-38303.653) [-38298.813] (-38312.736) (-38297.002) -- 1:11:29
517000 -- [-38300.834] (-38311.028) (-38314.772) (-38311.131) * (-38313.471) (-38305.100) [-38300.197] (-38304.213) -- 1:11:20
518000 -- [-38307.984] (-38306.838) (-38311.158) (-38305.173) * (-38306.472) [-38300.010] (-38308.939) (-38306.126) -- 1:11:11
519000 -- (-38307.903) (-38300.052) (-38313.213) [-38305.880] * (-38302.451) [-38297.940] (-38306.078) (-38330.313) -- 1:11:02
520000 -- (-38309.530) (-38306.275) [-38307.995] (-38302.493) * (-38307.382) [-38301.217] (-38307.611) (-38317.672) -- 1:10:53
Average standard deviation of split frequencies: 0.000423
521000 -- (-38312.623) (-38302.688) (-38308.277) [-38301.568] * [-38304.831] (-38304.772) (-38318.612) (-38308.077) -- 1:10:44
522000 -- (-38313.024) (-38303.139) (-38311.949) [-38308.869] * (-38311.826) (-38314.150) [-38314.144] (-38306.897) -- 1:10:36
523000 -- (-38307.612) (-38307.675) (-38322.816) [-38299.122] * [-38312.509] (-38309.360) (-38316.461) (-38301.509) -- 1:10:27
524000 -- (-38307.803) [-38299.335] (-38314.957) (-38308.019) * [-38309.887] (-38304.699) (-38312.441) (-38311.920) -- 1:10:18
525000 -- (-38307.469) [-38305.898] (-38308.824) (-38302.477) * [-38305.804] (-38305.550) (-38311.562) (-38315.984) -- 1:10:08
Average standard deviation of split frequencies: 0.000358
526000 -- (-38304.169) [-38303.615] (-38312.476) (-38312.910) * (-38305.283) [-38305.979] (-38305.448) (-38302.727) -- 1:10:00
527000 -- (-38301.795) (-38310.122) [-38298.297] (-38305.103) * (-38306.747) [-38319.264] (-38312.992) (-38310.079) -- 1:09:51
528000 -- (-38304.747) (-38311.734) [-38301.187] (-38304.626) * [-38303.741] (-38315.249) (-38304.576) (-38306.692) -- 1:09:42
529000 -- (-38303.056) (-38303.898) [-38302.433] (-38320.410) * (-38310.507) [-38305.759] (-38305.653) (-38305.773) -- 1:09:34
530000 -- (-38308.381) (-38303.475) [-38304.465] (-38312.105) * (-38301.129) [-38302.299] (-38307.381) (-38313.221) -- 1:09:25
Average standard deviation of split frequencies: 0.000415
531000 -- [-38304.995] (-38301.646) (-38307.293) (-38312.276) * [-38300.776] (-38298.829) (-38310.925) (-38308.859) -- 1:09:15
532000 -- (-38314.714) [-38304.485] (-38324.304) (-38314.556) * (-38299.470) [-38301.942] (-38302.888) (-38315.016) -- 1:09:06
533000 -- (-38315.952) (-38312.784) (-38309.294) [-38302.850] * [-38295.218] (-38302.929) (-38296.099) (-38308.331) -- 1:08:58
534000 -- [-38305.869] (-38306.013) (-38311.833) (-38310.064) * [-38310.125] (-38310.123) (-38296.672) (-38310.006) -- 1:08:49
535000 -- (-38305.894) [-38318.018] (-38302.178) (-38308.351) * (-38304.379) (-38302.257) (-38300.414) [-38302.435] -- 1:08:40
Average standard deviation of split frequencies: 0.000469
536000 -- (-38303.108) (-38305.652) [-38307.123] (-38307.053) * (-38323.568) (-38307.171) (-38302.484) [-38297.995] -- 1:08:31
537000 -- (-38313.349) (-38301.642) [-38308.479] (-38315.253) * (-38306.453) [-38301.330] (-38304.993) (-38312.565) -- 1:08:22
538000 -- (-38312.271) [-38306.227] (-38313.701) (-38301.606) * (-38300.045) (-38313.448) (-38301.520) [-38302.276] -- 1:08:13
539000 -- (-38309.357) (-38309.481) (-38306.925) [-38304.889] * (-38308.677) (-38305.711) [-38301.556] (-38313.371) -- 1:08:04
540000 -- (-38311.094) [-38305.472] (-38302.226) (-38309.759) * (-38325.778) [-38300.614] (-38301.258) (-38314.006) -- 1:07:55
Average standard deviation of split frequencies: 0.000407
541000 -- (-38315.439) (-38315.252) (-38308.249) [-38299.587] * (-38309.723) (-38302.086) [-38302.043] (-38304.743) -- 1:07:46
542000 -- (-38311.856) (-38306.858) [-38312.942] (-38309.136) * (-38304.205) (-38306.619) (-38310.263) [-38307.194] -- 1:07:37
543000 -- (-38314.448) (-38317.551) (-38310.301) [-38299.937] * [-38311.196] (-38303.727) (-38305.417) (-38318.714) -- 1:07:28
544000 -- (-38315.759) (-38300.707) (-38308.416) [-38303.950] * (-38329.086) [-38301.610] (-38312.585) (-38313.703) -- 1:07:19
545000 -- [-38306.092] (-38311.702) (-38306.285) (-38308.335) * (-38311.795) (-38305.223) (-38308.743) [-38303.358] -- 1:07:10
Average standard deviation of split frequencies: 0.000518
546000 -- (-38313.475) (-38306.936) (-38304.289) [-38305.571] * (-38312.050) [-38302.597] (-38307.889) (-38306.337) -- 1:07:01
547000 -- (-38308.148) (-38307.879) (-38302.799) [-38305.222] * (-38308.192) (-38313.957) [-38307.713] (-38298.596) -- 1:06:53
548000 -- (-38312.562) (-38310.923) (-38301.271) [-38303.995] * (-38306.862) (-38312.177) (-38306.838) [-38297.075] -- 1:06:44
549000 -- (-38293.106) (-38314.204) [-38299.717] (-38305.446) * [-38305.740] (-38307.678) (-38314.922) (-38305.786) -- 1:06:34
550000 -- (-38312.323) [-38298.859] (-38306.894) (-38302.555) * (-38307.618) [-38311.686] (-38318.746) (-38309.092) -- 1:06:26
Average standard deviation of split frequencies: 0.000628
551000 -- (-38308.862) [-38308.577] (-38313.636) (-38308.615) * (-38317.189) [-38302.303] (-38313.595) (-38309.952) -- 1:06:17
552000 -- (-38313.771) [-38307.403] (-38319.306) (-38318.505) * (-38308.796) [-38309.070] (-38313.310) (-38311.006) -- 1:06:08
553000 -- (-38314.776) (-38310.204) [-38309.888] (-38309.387) * (-38302.670) [-38306.215] (-38313.142) (-38309.377) -- 1:05:59
554000 -- (-38306.922) [-38300.984] (-38304.345) (-38315.075) * (-38309.009) (-38311.784) [-38300.908] (-38299.195) -- 1:05:50
555000 -- [-38305.931] (-38302.475) (-38306.225) (-38308.255) * (-38309.138) (-38313.933) [-38308.410] (-38303.160) -- 1:05:41
Average standard deviation of split frequencies: 0.000791
556000 -- (-38308.841) (-38300.093) (-38307.770) [-38312.165] * (-38311.294) (-38306.520) (-38314.146) [-38304.023] -- 1:05:32
557000 -- (-38303.439) (-38303.587) (-38305.833) [-38302.398] * (-38303.818) [-38312.467] (-38313.561) (-38303.407) -- 1:05:24
558000 -- [-38302.029] (-38308.208) (-38301.649) (-38308.256) * (-38306.454) (-38306.820) [-38319.263] (-38311.812) -- 1:05:14
559000 -- (-38305.956) (-38308.019) [-38300.832] (-38303.825) * [-38306.605] (-38298.123) (-38308.781) (-38305.573) -- 1:05:05
560000 -- [-38301.041] (-38311.889) (-38304.969) (-38309.060) * (-38305.912) (-38301.695) [-38310.691] (-38304.792) -- 1:04:57
Average standard deviation of split frequencies: 0.000785
561000 -- (-38301.999) [-38299.799] (-38312.426) (-38299.521) * [-38315.121] (-38306.781) (-38309.318) (-38312.663) -- 1:04:48
562000 -- (-38304.244) (-38307.742) [-38311.485] (-38301.405) * (-38311.745) [-38304.195] (-38319.186) (-38311.304) -- 1:04:39
563000 -- [-38311.381] (-38301.381) (-38303.163) (-38301.502) * (-38300.727) (-38312.958) (-38311.024) [-38312.981] -- 1:04:30
564000 -- (-38310.668) (-38303.651) [-38307.712] (-38307.844) * (-38308.426) (-38309.264) (-38324.534) [-38311.018] -- 1:04:21
565000 -- (-38316.790) (-38305.893) [-38307.990] (-38307.241) * [-38302.654] (-38304.632) (-38311.445) (-38306.811) -- 1:04:12
Average standard deviation of split frequencies: 0.000666
566000 -- (-38311.152) (-38306.380) [-38309.919] (-38311.592) * (-38305.247) [-38298.643] (-38310.698) (-38303.571) -- 1:04:03
567000 -- (-38311.959) (-38312.518) (-38311.358) [-38303.944] * (-38305.411) (-38305.594) (-38313.223) [-38301.444] -- 1:03:55
568000 -- [-38304.698] (-38311.985) (-38304.990) (-38309.622) * (-38306.895) [-38307.332] (-38304.556) (-38309.486) -- 1:03:46
569000 -- (-38297.474) (-38302.443) (-38310.270) [-38308.128] * (-38304.716) (-38304.058) (-38308.120) [-38310.914] -- 1:03:37
570000 -- (-38310.355) [-38311.384] (-38304.440) (-38301.839) * [-38301.937] (-38307.088) (-38314.834) (-38305.907) -- 1:03:28
Average standard deviation of split frequencies: 0.000606
571000 -- (-38319.558) [-38300.130] (-38308.441) (-38313.916) * (-38307.992) (-38304.955) (-38318.072) [-38309.788] -- 1:03:20
572000 -- (-38308.940) (-38303.931) (-38318.890) [-38304.951] * (-38306.482) [-38305.798] (-38311.945) (-38325.336) -- 1:03:11
573000 -- (-38307.442) [-38314.792] (-38322.235) (-38301.110) * (-38303.585) (-38317.207) [-38300.400] (-38320.134) -- 1:03:01
574000 -- (-38309.440) [-38307.850] (-38322.814) (-38310.104) * [-38293.238] (-38305.110) (-38306.307) (-38312.091) -- 1:02:53
575000 -- [-38308.320] (-38306.463) (-38322.582) (-38303.730) * (-38308.081) (-38299.903) [-38298.292] (-38306.616) -- 1:02:44
Average standard deviation of split frequencies: 0.000655
576000 -- (-38307.663) [-38300.558] (-38315.699) (-38305.687) * (-38308.854) (-38306.497) (-38316.232) [-38299.700] -- 1:02:35
577000 -- (-38308.209) (-38305.436) [-38296.889] (-38307.150) * (-38302.432) (-38316.047) (-38306.964) [-38301.236] -- 1:02:26
578000 -- (-38315.412) (-38306.811) (-38313.137) [-38298.287] * (-38300.217) (-38310.162) [-38308.116] (-38309.759) -- 1:02:18
579000 -- [-38300.506] (-38310.539) (-38297.764) (-38299.388) * (-38301.318) [-38303.205] (-38308.988) (-38311.617) -- 1:02:09
580000 -- (-38306.934) (-38311.950) [-38305.157] (-38309.894) * (-38300.775) (-38313.487) (-38312.902) [-38298.714] -- 1:02:00
Average standard deviation of split frequencies: 0.000649
581000 -- (-38304.967) (-38320.717) [-38307.852] (-38306.533) * (-38303.020) (-38311.058) (-38310.036) [-38305.863] -- 1:01:51
582000 -- [-38296.906] (-38315.035) (-38318.396) (-38297.419) * (-38294.988) (-38313.187) [-38302.835] (-38299.760) -- 1:01:42
583000 -- [-38299.710] (-38320.248) (-38321.572) (-38304.271) * (-38295.854) (-38319.844) (-38311.786) [-38309.169] -- 1:01:33
584000 -- [-38305.778] (-38307.965) (-38316.876) (-38303.540) * [-38303.145] (-38308.679) (-38312.414) (-38306.832) -- 1:01:24
585000 -- (-38326.006) (-38313.411) (-38309.949) [-38303.367] * [-38305.390] (-38307.859) (-38315.576) (-38308.117) -- 1:01:15
Average standard deviation of split frequencies: 0.001006
586000 -- (-38304.425) (-38304.223) [-38305.462] (-38305.787) * (-38303.951) (-38309.753) [-38309.438] (-38304.575) -- 1:01:06
587000 -- (-38304.470) (-38303.362) [-38302.670] (-38314.988) * (-38302.532) [-38302.052] (-38317.105) (-38304.451) -- 1:00:57
588000 -- [-38309.527] (-38306.752) (-38316.852) (-38304.590) * (-38315.136) [-38306.113] (-38326.132) (-38309.246) -- 1:00:49
589000 -- (-38307.614) (-38315.414) (-38306.564) [-38300.440] * (-38311.597) [-38296.806] (-38310.398) (-38305.293) -- 1:00:40
590000 -- [-38303.555] (-38314.936) (-38300.773) (-38297.785) * (-38302.701) [-38298.445] (-38312.640) (-38305.397) -- 1:00:31
Average standard deviation of split frequencies: 0.001097
591000 -- (-38304.158) [-38303.543] (-38313.495) (-38313.453) * (-38312.400) (-38307.295) [-38306.402] (-38305.766) -- 1:00:22
592000 -- (-38322.468) [-38303.072] (-38304.354) (-38310.159) * (-38322.490) (-38304.050) [-38299.520] (-38308.868) -- 1:00:14
593000 -- (-38316.518) [-38298.297] (-38309.221) (-38320.521) * (-38304.641) [-38304.262] (-38312.116) (-38311.265) -- 1:00:05
594000 -- (-38312.875) [-38302.087] (-38306.193) (-38306.185) * (-38302.889) (-38303.513) (-38311.113) [-38306.593] -- 0:59:55
595000 -- (-38297.032) (-38307.289) [-38299.991] (-38320.688) * (-38303.377) [-38309.621] (-38313.522) (-38307.261) -- 0:59:47
Average standard deviation of split frequencies: 0.001088
596000 -- [-38311.642] (-38317.520) (-38311.160) (-38313.473) * (-38303.702) [-38305.233] (-38309.362) (-38302.470) -- 0:59:38
597000 -- (-38319.679) (-38313.296) (-38306.895) [-38301.065] * [-38296.555] (-38309.442) (-38308.108) (-38303.633) -- 0:59:29
598000 -- (-38306.717) (-38303.360) (-38313.250) [-38298.488] * (-38304.037) (-38314.480) (-38301.446) [-38304.247] -- 0:59:20
599000 -- (-38306.633) [-38299.792] (-38314.533) (-38303.515) * (-38305.258) (-38334.080) (-38310.119) [-38312.494] -- 0:59:12
600000 -- (-38312.095) (-38307.192) (-38313.593) [-38300.569] * (-38318.020) [-38303.932] (-38302.485) (-38314.634) -- 0:59:03
Average standard deviation of split frequencies: 0.001079
601000 -- (-38304.555) (-38300.899) (-38323.468) [-38298.684] * (-38317.344) (-38311.760) [-38303.724] (-38301.846) -- 0:58:54
602000 -- (-38301.212) (-38298.309) (-38321.237) [-38305.990] * (-38314.476) (-38311.267) (-38321.508) [-38298.299] -- 0:58:45
603000 -- [-38308.747] (-38301.181) (-38314.690) (-38307.387) * (-38315.247) [-38298.341] (-38312.692) (-38312.586) -- 0:58:37
604000 -- (-38312.311) (-38307.770) [-38304.160] (-38298.440) * (-38296.759) [-38300.435] (-38314.133) (-38311.527) -- 0:58:27
605000 -- (-38316.933) [-38312.377] (-38311.373) (-38299.739) * (-38307.092) (-38299.870) [-38304.752] (-38306.834) -- 0:58:18
Average standard deviation of split frequencies: 0.001021
606000 -- (-38311.895) [-38306.003] (-38297.873) (-38304.004) * (-38302.624) [-38310.031] (-38307.662) (-38308.580) -- 0:58:10
607000 -- [-38299.423] (-38303.052) (-38300.448) (-38306.975) * (-38309.365) (-38313.536) [-38306.200] (-38310.363) -- 0:58:01
608000 -- (-38313.394) (-38306.976) [-38299.177] (-38327.747) * (-38310.916) [-38307.389] (-38314.419) (-38298.321) -- 0:57:52
609000 -- [-38305.970] (-38298.786) (-38299.159) (-38313.091) * (-38312.370) (-38307.810) (-38308.382) [-38305.632] -- 0:57:43
610000 -- (-38312.979) (-38308.394) [-38300.182] (-38314.182) * (-38310.666) (-38300.240) (-38300.336) [-38301.816] -- 0:57:34
Average standard deviation of split frequencies: 0.001013
611000 -- (-38315.906) [-38304.996] (-38302.160) (-38313.282) * (-38306.500) [-38302.515] (-38316.113) (-38311.929) -- 0:57:25
612000 -- (-38315.791) [-38303.490] (-38323.549) (-38309.118) * [-38310.788] (-38304.742) (-38304.504) (-38310.373) -- 0:57:16
613000 -- [-38321.807] (-38318.877) (-38307.811) (-38310.044) * [-38298.072] (-38306.195) (-38308.019) (-38313.958) -- 0:57:08
614000 -- (-38305.146) (-38308.228) [-38301.091] (-38312.106) * (-38296.547) [-38308.153] (-38308.868) (-38312.292) -- 0:56:59
615000 -- (-38310.900) (-38312.382) (-38312.211) [-38299.265] * [-38302.712] (-38308.995) (-38327.285) (-38311.450) -- 0:56:50
Average standard deviation of split frequencies: 0.001100
616000 -- (-38328.826) (-38302.973) (-38319.225) [-38303.734] * [-38298.195] (-38301.214) (-38309.069) (-38305.173) -- 0:56:41
617000 -- (-38312.949) [-38300.880] (-38300.208) (-38306.064) * (-38304.738) (-38310.926) [-38301.089] (-38308.091) -- 0:56:32
618000 -- (-38315.066) [-38302.312] (-38294.873) (-38303.546) * (-38311.936) [-38305.502] (-38300.694) (-38296.674) -- 0:56:24
619000 -- [-38301.853] (-38304.671) (-38302.406) (-38306.742) * [-38302.872] (-38318.671) (-38305.289) (-38305.408) -- 0:56:15
620000 -- (-38305.812) [-38306.134] (-38310.358) (-38306.236) * (-38305.588) [-38308.519] (-38301.490) (-38309.753) -- 0:56:06
Average standard deviation of split frequencies: 0.000949
621000 -- (-38309.449) (-38311.650) [-38302.545] (-38295.686) * [-38311.648] (-38317.150) (-38313.250) (-38303.205) -- 0:55:57
622000 -- (-38320.890) (-38316.072) (-38302.876) [-38302.969] * (-38307.624) [-38309.618] (-38307.617) (-38307.449) -- 0:55:48
623000 -- (-38312.765) (-38317.151) (-38304.572) [-38301.022] * (-38303.741) [-38301.895] (-38301.008) (-38315.041) -- 0:55:39
624000 -- [-38304.551] (-38317.530) (-38306.900) (-38309.525) * (-38304.141) (-38314.600) (-38305.713) [-38308.294] -- 0:55:30
625000 -- (-38318.723) [-38304.439] (-38309.719) (-38306.637) * (-38309.448) (-38311.787) [-38304.124] (-38318.955) -- 0:55:21
Average standard deviation of split frequencies: 0.001035
626000 -- (-38316.151) (-38310.093) [-38304.564] (-38307.708) * [-38303.233] (-38311.931) (-38312.959) (-38312.271) -- 0:55:12
627000 -- (-38317.060) (-38309.312) [-38301.960] (-38307.532) * [-38303.332] (-38310.205) (-38311.689) (-38313.688) -- 0:55:04
628000 -- (-38314.321) [-38312.928] (-38305.935) (-38307.321) * [-38306.190] (-38307.827) (-38322.889) (-38311.600) -- 0:54:55
629000 -- (-38305.759) (-38307.397) (-38308.958) [-38304.792] * (-38297.338) (-38313.462) (-38311.312) [-38301.220] -- 0:54:46
630000 -- (-38300.406) (-38314.335) (-38312.205) [-38298.581] * (-38313.428) (-38311.283) (-38304.938) [-38295.497] -- 0:54:37
Average standard deviation of split frequencies: 0.001121
631000 -- (-38303.771) [-38300.376] (-38315.542) (-38313.249) * (-38314.421) (-38306.435) (-38312.118) [-38301.883] -- 0:54:28
632000 -- (-38305.480) (-38309.424) (-38312.325) [-38303.452] * (-38307.978) [-38303.347] (-38306.229) (-38314.075) -- 0:54:20
633000 -- (-38304.947) (-38299.585) (-38303.669) [-38300.848] * [-38308.609] (-38301.412) (-38327.186) (-38314.296) -- 0:54:10
634000 -- (-38313.651) (-38310.018) (-38304.312) [-38313.984] * [-38310.006] (-38305.163) (-38308.406) (-38315.299) -- 0:54:02
635000 -- (-38310.925) [-38302.410] (-38315.309) (-38303.013) * (-38304.452) (-38307.168) (-38301.093) [-38306.439] -- 0:53:53
Average standard deviation of split frequencies: 0.001251
636000 -- (-38307.290) [-38307.809] (-38303.441) (-38298.806) * (-38323.985) [-38304.511] (-38303.749) (-38312.935) -- 0:53:44
637000 -- (-38306.066) [-38299.173] (-38298.700) (-38304.381) * (-38308.178) [-38304.557] (-38297.333) (-38306.277) -- 0:53:35
638000 -- [-38305.851] (-38313.694) (-38311.092) (-38309.094) * (-38325.659) (-38312.352) [-38302.935] (-38310.166) -- 0:53:26
639000 -- (-38319.622) [-38302.247] (-38315.666) (-38309.517) * (-38316.360) (-38323.723) (-38309.547) [-38315.410] -- 0:53:17
640000 -- [-38306.399] (-38302.625) (-38320.786) (-38305.736) * (-38311.461) (-38319.077) (-38301.847) [-38310.716] -- 0:53:08
Average standard deviation of split frequencies: 0.001058
641000 -- (-38304.247) [-38302.558] (-38320.760) (-38302.877) * (-38301.911) (-38314.281) [-38301.239] (-38313.572) -- 0:53:00
642000 -- (-38311.133) (-38306.765) [-38301.232] (-38311.598) * (-38315.506) (-38305.145) (-38301.255) [-38307.822] -- 0:52:51
643000 -- [-38302.236] (-38308.188) (-38302.188) (-38302.028) * (-38300.498) [-38308.058] (-38305.725) (-38311.876) -- 0:52:42
644000 -- (-38304.652) [-38307.653] (-38311.898) (-38303.587) * (-38310.435) [-38299.246] (-38309.882) (-38315.070) -- 0:52:33
645000 -- [-38306.924] (-38311.900) (-38318.084) (-38304.303) * (-38302.446) (-38308.376) [-38310.242] (-38311.564) -- 0:52:24
Average standard deviation of split frequencies: 0.001368
646000 -- (-38322.979) [-38307.454] (-38319.470) (-38308.388) * [-38301.836] (-38303.352) (-38317.530) (-38302.003) -- 0:52:15
647000 -- [-38309.866] (-38304.905) (-38309.458) (-38305.093) * (-38301.990) (-38312.583) (-38318.296) [-38304.892] -- 0:52:06
648000 -- (-38303.031) [-38301.300] (-38299.781) (-38310.540) * [-38299.639] (-38301.219) (-38319.130) (-38315.884) -- 0:51:57
649000 -- (-38308.559) (-38313.859) [-38300.300] (-38305.295) * (-38305.890) [-38295.196] (-38300.240) (-38307.647) -- 0:51:48
650000 -- [-38300.177] (-38314.004) (-38305.273) (-38306.219) * (-38301.501) (-38303.640) (-38302.221) [-38299.258] -- 0:51:39
Average standard deviation of split frequencies: 0.001132
651000 -- (-38309.730) [-38302.958] (-38315.562) (-38309.712) * [-38304.984] (-38297.796) (-38310.132) (-38303.944) -- 0:51:31
652000 -- [-38307.191] (-38307.896) (-38304.184) (-38311.586) * [-38302.881] (-38302.995) (-38303.509) (-38306.791) -- 0:51:22
653000 -- (-38306.625) (-38305.027) [-38302.750] (-38312.941) * (-38310.454) [-38298.178] (-38303.242) (-38305.740) -- 0:51:13
654000 -- [-38300.770] (-38308.809) (-38300.795) (-38309.618) * (-38308.670) (-38306.158) (-38299.427) [-38298.215] -- 0:51:04
655000 -- (-38303.902) (-38310.060) [-38298.360] (-38311.161) * [-38303.775] (-38318.152) (-38305.173) (-38296.386) -- 0:50:56
Average standard deviation of split frequencies: 0.001078
656000 -- [-38309.371] (-38318.881) (-38308.356) (-38308.501) * (-38311.905) (-38305.413) (-38321.132) [-38300.244] -- 0:50:47
657000 -- [-38307.619] (-38306.840) (-38306.748) (-38309.080) * [-38300.858] (-38306.514) (-38313.182) (-38296.619) -- 0:50:38
658000 -- (-38308.930) (-38297.215) (-38306.690) [-38306.904] * (-38301.090) (-38310.985) (-38315.810) [-38307.560] -- 0:50:29
659000 -- (-38314.827) [-38303.105] (-38308.809) (-38302.511) * [-38304.255] (-38309.698) (-38310.467) (-38305.516) -- 0:50:20
660000 -- (-38303.693) (-38308.038) [-38301.496] (-38313.909) * [-38296.982] (-38303.364) (-38309.778) (-38307.382) -- 0:50:11
Average standard deviation of split frequencies: 0.000847
661000 -- [-38300.724] (-38304.461) (-38301.215) (-38308.802) * (-38303.272) [-38303.080] (-38297.371) (-38310.913) -- 0:50:02
662000 -- (-38303.918) (-38304.742) [-38303.615] (-38315.327) * [-38301.096] (-38311.157) (-38304.323) (-38311.789) -- 0:49:54
663000 -- (-38295.514) (-38314.281) [-38307.563] (-38302.555) * (-38309.169) (-38302.259) [-38307.206] (-38303.404) -- 0:49:45
664000 -- (-38314.969) (-38307.065) [-38303.512] (-38303.037) * (-38308.674) (-38301.068) [-38305.532] (-38298.222) -- 0:49:36
665000 -- (-38311.795) (-38300.499) (-38306.714) [-38305.294] * (-38311.311) (-38307.408) (-38307.714) [-38297.801] -- 0:49:27
Average standard deviation of split frequencies: 0.001194
666000 -- (-38316.084) [-38306.409] (-38308.024) (-38315.253) * (-38316.990) (-38309.803) (-38306.491) [-38298.586] -- 0:49:18
667000 -- (-38310.202) (-38312.082) (-38299.872) [-38300.379] * (-38299.903) (-38312.829) (-38317.027) [-38313.138] -- 0:49:09
668000 -- (-38311.135) (-38317.398) [-38302.381] (-38299.470) * (-38304.051) (-38309.278) (-38312.702) [-38311.662] -- 0:49:00
669000 -- (-38309.468) (-38309.200) [-38306.988] (-38302.855) * [-38296.286] (-38311.962) (-38305.152) (-38313.365) -- 0:48:51
670000 -- (-38306.025) (-38305.805) [-38305.183] (-38310.589) * (-38303.697) (-38309.231) [-38308.027] (-38313.778) -- 0:48:43
Average standard deviation of split frequencies: 0.001274
671000 -- (-38300.143) (-38305.294) [-38297.148] (-38312.412) * (-38307.158) [-38300.187] (-38306.415) (-38312.553) -- 0:48:33
672000 -- (-38313.667) [-38310.578] (-38308.914) (-38305.502) * [-38304.461] (-38314.926) (-38316.684) (-38309.714) -- 0:48:25
673000 -- (-38304.095) [-38303.453] (-38300.893) (-38309.990) * (-38303.578) [-38305.523] (-38309.390) (-38318.884) -- 0:48:16
674000 -- [-38307.312] (-38308.971) (-38309.999) (-38319.399) * (-38308.704) (-38309.191) [-38298.715] (-38317.832) -- 0:48:07
675000 -- (-38307.073) (-38323.278) [-38298.304] (-38326.422) * [-38301.981] (-38311.437) (-38297.802) (-38316.411) -- 0:47:58
Average standard deviation of split frequencies: 0.001438
676000 -- (-38310.512) [-38304.166] (-38303.764) (-38310.105) * [-38312.288] (-38317.079) (-38308.127) (-38325.268) -- 0:47:49
677000 -- (-38318.106) [-38298.558] (-38300.949) (-38316.348) * [-38303.832] (-38307.550) (-38301.121) (-38306.297) -- 0:47:41
678000 -- (-38306.872) (-38305.345) [-38302.996] (-38300.953) * (-38313.516) (-38310.916) (-38298.378) [-38303.399] -- 0:47:32
679000 -- [-38306.262] (-38301.456) (-38319.581) (-38301.270) * (-38309.767) (-38305.745) [-38304.896] (-38303.840) -- 0:47:23
680000 -- (-38306.776) [-38307.333] (-38316.535) (-38302.714) * (-38305.199) [-38301.764] (-38296.931) (-38307.569) -- 0:47:14
Average standard deviation of split frequencies: 0.001342
681000 -- [-38308.172] (-38311.965) (-38304.600) (-38314.408) * (-38304.040) [-38301.277] (-38309.820) (-38307.317) -- 0:47:05
682000 -- [-38311.080] (-38318.169) (-38309.096) (-38318.665) * [-38311.262] (-38303.455) (-38306.989) (-38308.672) -- 0:46:56
683000 -- [-38304.429] (-38308.695) (-38302.776) (-38317.980) * (-38317.634) (-38304.710) (-38308.816) [-38305.978] -- 0:46:47
684000 -- (-38310.666) (-38312.260) (-38300.354) [-38308.105] * (-38312.046) [-38304.770] (-38303.262) (-38314.531) -- 0:46:39
685000 -- (-38307.911) (-38324.432) [-38300.336] (-38314.887) * (-38307.952) (-38308.060) [-38298.259] (-38313.645) -- 0:46:30
Average standard deviation of split frequencies: 0.000945
686000 -- [-38300.559] (-38322.201) (-38302.420) (-38304.278) * [-38316.595] (-38310.118) (-38311.534) (-38308.464) -- 0:46:21
687000 -- (-38308.430) (-38321.154) [-38317.919] (-38305.921) * (-38314.704) (-38301.077) [-38303.290] (-38310.614) -- 0:46:12
688000 -- (-38306.501) (-38323.332) [-38303.371] (-38306.584) * (-38302.486) (-38316.476) (-38303.645) [-38310.756] -- 0:46:03
689000 -- (-38307.592) (-38314.322) (-38300.787) [-38296.027] * [-38296.932] (-38308.954) (-38306.014) (-38316.897) -- 0:45:54
690000 -- (-38307.893) [-38315.673] (-38321.732) (-38302.201) * [-38304.782] (-38303.377) (-38303.785) (-38305.073) -- 0:45:45
Average standard deviation of split frequencies: 0.000896
691000 -- (-38298.613) [-38302.187] (-38311.988) (-38309.333) * (-38294.154) (-38307.319) [-38301.397] (-38309.018) -- 0:45:37
692000 -- (-38314.675) (-38303.182) (-38314.101) [-38306.784] * (-38313.692) [-38299.888] (-38308.793) (-38309.385) -- 0:45:27
693000 -- (-38300.731) (-38307.431) (-38313.795) [-38304.062] * (-38305.301) (-38309.550) [-38306.837] (-38304.487) -- 0:45:19
694000 -- [-38299.848] (-38307.273) (-38320.978) (-38315.344) * [-38302.138] (-38310.174) (-38299.724) (-38309.721) -- 0:45:10
695000 -- [-38304.313] (-38306.013) (-38317.270) (-38306.819) * (-38319.500) (-38319.994) [-38300.707] (-38298.828) -- 0:45:01
Average standard deviation of split frequencies: 0.000889
696000 -- (-38306.899) (-38306.451) (-38319.394) [-38297.472] * [-38304.605] (-38319.837) (-38301.779) (-38302.182) -- 0:44:52
697000 -- (-38297.398) (-38318.946) (-38308.859) [-38301.090] * (-38304.443) (-38317.567) (-38307.379) [-38302.525] -- 0:44:43
698000 -- [-38298.036] (-38304.060) (-38313.054) (-38308.563) * [-38298.048] (-38317.145) (-38307.467) (-38313.277) -- 0:44:35
699000 -- (-38302.863) (-38302.473) [-38312.662] (-38309.941) * (-38303.461) [-38310.283] (-38302.689) (-38310.349) -- 0:44:26
700000 -- (-38306.460) [-38306.426] (-38310.356) (-38309.332) * (-38306.252) (-38306.057) (-38301.251) [-38306.635] -- 0:44:17
Average standard deviation of split frequencies: 0.000799
701000 -- (-38311.734) (-38324.251) [-38297.967] (-38301.881) * (-38304.791) (-38309.090) [-38301.445] (-38314.531) -- 0:44:08
702000 -- (-38312.049) (-38308.628) (-38307.417) [-38299.494] * (-38309.016) (-38309.685) [-38301.261] (-38313.317) -- 0:43:59
703000 -- (-38310.629) [-38305.694] (-38308.883) (-38312.524) * (-38305.439) [-38306.964] (-38304.079) (-38304.883) -- 0:43:50
704000 -- (-38304.487) (-38314.136) (-38302.345) [-38309.604] * (-38301.563) (-38302.817) [-38306.241] (-38312.184) -- 0:43:41
705000 -- [-38310.156] (-38317.088) (-38309.588) (-38311.674) * (-38311.497) (-38302.025) [-38302.040] (-38329.116) -- 0:43:33
Average standard deviation of split frequencies: 0.000835
706000 -- (-38310.636) (-38310.502) [-38304.120] (-38316.356) * [-38301.113] (-38310.165) (-38300.012) (-38319.931) -- 0:43:24
707000 -- [-38299.464] (-38311.359) (-38301.269) (-38314.469) * (-38309.609) (-38308.634) [-38306.493] (-38320.113) -- 0:43:15
708000 -- (-38309.453) (-38309.134) (-38302.371) [-38296.901] * (-38302.044) (-38308.044) [-38300.090] (-38303.051) -- 0:43:06
709000 -- (-38301.379) (-38310.326) [-38300.176] (-38309.748) * (-38302.662) [-38310.650] (-38310.891) (-38304.983) -- 0:42:57
710000 -- (-38316.832) [-38305.463] (-38303.445) (-38308.863) * (-38303.402) [-38305.782] (-38310.733) (-38316.730) -- 0:42:49
Average standard deviation of split frequencies: 0.000871
711000 -- (-38312.470) (-38305.680) [-38301.470] (-38295.238) * (-38316.187) [-38306.185] (-38315.432) (-38315.591) -- 0:42:39
712000 -- (-38317.553) (-38299.663) (-38305.908) [-38310.079] * (-38315.002) [-38307.439] (-38314.190) (-38308.024) -- 0:42:31
713000 -- (-38308.208) (-38321.319) (-38306.670) [-38300.966] * (-38309.560) [-38304.942] (-38309.366) (-38309.910) -- 0:42:22
714000 -- [-38310.274] (-38310.530) (-38306.620) (-38303.456) * (-38312.089) (-38317.131) [-38311.348] (-38312.557) -- 0:42:13
715000 -- (-38306.059) [-38303.377] (-38305.763) (-38301.777) * [-38314.522] (-38313.947) (-38303.302) (-38316.776) -- 0:42:04
Average standard deviation of split frequencies: 0.000864
716000 -- (-38300.939) (-38311.657) (-38302.291) [-38303.615] * (-38314.425) (-38312.941) [-38300.996] (-38305.692) -- 0:41:55
717000 -- [-38309.371] (-38302.878) (-38305.762) (-38305.012) * (-38310.373) (-38311.118) [-38307.040] (-38305.304) -- 0:41:47
718000 -- [-38298.560] (-38303.981) (-38301.573) (-38307.625) * (-38306.649) (-38303.642) (-38302.179) [-38307.597] -- 0:41:38
719000 -- [-38306.356] (-38305.509) (-38314.653) (-38309.363) * [-38303.037] (-38309.833) (-38305.114) (-38308.292) -- 0:41:29
720000 -- [-38297.440] (-38305.993) (-38310.578) (-38302.223) * [-38303.430] (-38317.149) (-38314.401) (-38311.051) -- 0:41:20
Average standard deviation of split frequencies: 0.000899
721000 -- (-38301.560) (-38301.136) [-38310.818] (-38305.641) * (-38309.047) (-38310.307) (-38313.747) [-38304.594] -- 0:41:11
722000 -- (-38305.504) (-38312.136) [-38297.966] (-38303.200) * (-38305.357) (-38310.726) (-38309.938) [-38309.477] -- 0:41:03
723000 -- (-38306.268) (-38304.838) [-38304.495] (-38316.408) * (-38309.904) (-38301.220) (-38322.571) [-38302.691] -- 0:40:53
724000 -- (-38302.605) (-38307.514) (-38303.831) [-38311.284] * (-38322.623) (-38296.316) [-38316.452] (-38303.117) -- 0:40:45
725000 -- (-38302.673) [-38304.043] (-38305.739) (-38308.600) * (-38312.006) (-38298.238) [-38308.304] (-38312.449) -- 0:40:36
Average standard deviation of split frequencies: 0.000974
726000 -- (-38298.774) (-38312.831) [-38297.028] (-38309.778) * (-38320.480) (-38305.429) [-38306.895] (-38321.241) -- 0:40:27
727000 -- [-38298.193] (-38304.391) (-38300.080) (-38300.882) * (-38315.939) [-38302.790] (-38314.998) (-38305.132) -- 0:40:18
728000 -- (-38301.952) (-38304.985) (-38301.773) [-38295.793] * (-38312.733) [-38295.652] (-38304.097) (-38313.990) -- 0:40:09
729000 -- (-38309.097) (-38305.854) [-38299.125] (-38313.729) * (-38306.549) (-38298.924) (-38308.175) [-38303.479] -- 0:40:01
730000 -- (-38306.474) (-38308.746) (-38294.240) [-38299.325] * (-38304.015) (-38307.331) (-38314.992) [-38303.091] -- 0:39:52
Average standard deviation of split frequencies: 0.000731
731000 -- (-38317.043) (-38304.349) (-38306.827) [-38310.828] * [-38298.017] (-38309.471) (-38311.429) (-38315.587) -- 0:39:43
732000 -- (-38304.777) (-38302.753) (-38308.372) [-38310.745] * (-38304.484) (-38311.325) [-38300.601] (-38307.307) -- 0:39:34
733000 -- (-38318.449) [-38307.282] (-38301.514) (-38313.796) * [-38301.341] (-38309.222) (-38311.063) (-38313.831) -- 0:39:25
734000 -- (-38312.720) (-38307.735) [-38301.840] (-38306.257) * (-38307.477) (-38323.415) [-38296.444] (-38310.443) -- 0:39:17
735000 -- [-38303.948] (-38304.171) (-38311.270) (-38323.058) * (-38312.054) (-38314.626) (-38302.864) [-38310.184] -- 0:39:07
Average standard deviation of split frequencies: 0.000897
736000 -- (-38312.889) (-38313.585) [-38306.933] (-38305.939) * [-38302.722] (-38306.084) (-38316.028) (-38309.637) -- 0:38:59
737000 -- (-38307.443) (-38322.671) [-38299.149] (-38303.580) * (-38311.039) [-38304.094] (-38312.548) (-38311.570) -- 0:38:50
738000 -- (-38306.997) (-38307.067) [-38308.291] (-38302.836) * [-38300.028] (-38308.387) (-38310.146) (-38310.466) -- 0:38:41
739000 -- (-38302.593) [-38300.813] (-38307.619) (-38300.163) * (-38304.671) (-38308.675) (-38316.955) [-38306.695] -- 0:38:32
740000 -- (-38311.871) (-38324.838) (-38307.694) [-38298.525] * (-38306.417) (-38306.893) (-38309.758) [-38305.566] -- 0:38:23
Average standard deviation of split frequencies: 0.000891
741000 -- (-38309.838) (-38306.362) [-38303.937] (-38305.612) * (-38308.497) (-38306.838) (-38305.944) [-38302.289] -- 0:38:14
742000 -- (-38318.934) (-38307.580) [-38302.761] (-38315.557) * [-38302.835] (-38309.055) (-38300.870) (-38311.529) -- 0:38:05
743000 -- [-38311.230] (-38309.704) (-38315.481) (-38325.568) * [-38302.788] (-38311.440) (-38307.611) (-38302.322) -- 0:37:57
744000 -- [-38306.302] (-38315.983) (-38304.660) (-38312.731) * [-38297.987] (-38316.204) (-38312.570) (-38298.990) -- 0:37:48
745000 -- (-38307.758) [-38305.538] (-38308.519) (-38310.492) * (-38302.858) [-38301.677] (-38308.102) (-38308.520) -- 0:37:39
Average standard deviation of split frequencies: 0.000843
746000 -- [-38304.906] (-38306.846) (-38308.170) (-38312.152) * (-38307.217) (-38308.670) [-38309.728] (-38302.644) -- 0:37:30
747000 -- (-38305.339) (-38301.239) [-38302.098] (-38309.083) * (-38312.333) (-38313.603) (-38309.952) [-38307.988] -- 0:37:21
748000 -- (-38310.463) (-38306.709) [-38306.297] (-38304.238) * (-38301.638) [-38312.586] (-38307.919) (-38312.732) -- 0:37:12
749000 -- (-38311.456) (-38313.244) (-38301.119) [-38303.222] * (-38306.586) (-38315.578) [-38307.934] (-38318.438) -- 0:37:03
750000 -- (-38308.457) (-38305.070) [-38303.000] (-38298.004) * (-38311.795) (-38307.547) (-38302.648) [-38311.213] -- 0:36:55
Average standard deviation of split frequencies: 0.000921
751000 -- [-38298.949] (-38312.087) (-38300.161) (-38309.818) * (-38308.251) (-38302.711) [-38300.582] (-38299.707) -- 0:36:46
752000 -- (-38310.591) [-38306.627] (-38302.377) (-38312.078) * (-38303.056) [-38298.907] (-38309.184) (-38303.651) -- 0:36:37
753000 -- [-38305.136] (-38309.634) (-38308.869) (-38311.098) * (-38313.863) (-38315.320) [-38305.643] (-38307.580) -- 0:36:28
754000 -- (-38302.903) [-38310.096] (-38309.676) (-38302.421) * (-38308.112) (-38309.837) [-38304.625] (-38302.572) -- 0:36:19
755000 -- [-38296.325] (-38306.638) (-38303.019) (-38314.381) * [-38308.311] (-38308.407) (-38314.518) (-38308.392) -- 0:36:10
Average standard deviation of split frequencies: 0.000915
756000 -- (-38306.571) (-38308.180) [-38302.270] (-38296.978) * [-38305.675] (-38307.385) (-38316.841) (-38310.246) -- 0:36:01
757000 -- (-38299.836) (-38302.289) (-38301.472) [-38301.265] * (-38300.498) (-38309.778) [-38303.725] (-38311.923) -- 0:35:52
758000 -- [-38297.720] (-38329.319) (-38309.362) (-38306.869) * [-38300.066] (-38307.830) (-38322.617) (-38304.458) -- 0:35:44
759000 -- (-38307.562) (-38311.853) (-38311.209) [-38302.460] * (-38306.339) (-38315.242) [-38313.744] (-38312.698) -- 0:35:35
760000 -- [-38303.311] (-38309.090) (-38309.486) (-38308.893) * (-38294.946) (-38308.279) (-38324.781) [-38306.173] -- 0:35:26
Average standard deviation of split frequencies: 0.000702
761000 -- (-38300.882) (-38317.253) (-38312.311) [-38304.450] * (-38297.280) [-38301.694] (-38324.049) (-38299.853) -- 0:35:17
762000 -- (-38309.152) [-38303.055] (-38309.240) (-38313.329) * (-38313.441) [-38304.537] (-38316.192) (-38306.252) -- 0:35:08
763000 -- (-38313.353) (-38313.374) (-38304.291) [-38302.955] * [-38308.978] (-38309.677) (-38308.234) (-38314.484) -- 0:34:59
764000 -- (-38306.857) (-38297.934) (-38310.128) [-38310.534] * [-38313.031] (-38310.970) (-38300.602) (-38303.528) -- 0:34:50
765000 -- (-38310.133) (-38302.240) [-38306.365] (-38308.638) * (-38309.601) (-38311.619) (-38312.882) [-38300.626] -- 0:34:42
Average standard deviation of split frequencies: 0.000697
766000 -- (-38305.520) [-38308.304] (-38308.666) (-38314.677) * (-38311.979) (-38307.189) [-38302.213] (-38299.288) -- 0:34:33
767000 -- (-38325.800) [-38300.095] (-38306.732) (-38310.994) * (-38313.427) [-38314.346] (-38301.255) (-38302.719) -- 0:34:24
768000 -- (-38308.560) (-38312.380) [-38307.259] (-38307.429) * (-38307.239) (-38303.632) [-38301.022] (-38302.146) -- 0:34:15
769000 -- (-38320.681) (-38310.897) (-38307.428) [-38298.717] * (-38312.126) (-38308.158) [-38299.756] (-38315.437) -- 0:34:06
770000 -- (-38307.495) (-38304.926) (-38302.542) [-38308.780] * (-38308.769) (-38298.041) (-38315.432) [-38304.337] -- 0:33:57
Average standard deviation of split frequencies: 0.000816
771000 -- (-38315.347) [-38303.075] (-38300.624) (-38306.034) * (-38314.915) (-38306.474) [-38310.140] (-38310.744) -- 0:33:48
772000 -- (-38306.874) [-38292.804] (-38302.580) (-38305.755) * (-38304.132) [-38300.182] (-38298.491) (-38311.461) -- 0:33:40
773000 -- (-38331.351) (-38306.352) (-38307.918) [-38303.315] * (-38309.806) (-38296.231) [-38296.863] (-38300.219) -- 0:33:31
774000 -- (-38306.531) (-38306.887) [-38301.843] (-38314.775) * (-38311.478) [-38302.188] (-38297.219) (-38318.895) -- 0:33:22
775000 -- (-38308.341) (-38312.086) [-38302.998] (-38308.044) * (-38310.815) (-38303.417) [-38303.263] (-38307.340) -- 0:33:13
Average standard deviation of split frequencies: 0.000850
776000 -- (-38313.159) (-38300.851) (-38300.716) [-38304.492] * (-38315.207) [-38303.645] (-38315.418) (-38305.363) -- 0:33:04
777000 -- [-38298.403] (-38311.554) (-38292.241) (-38301.812) * (-38311.960) (-38301.589) (-38314.117) [-38306.087] -- 0:32:55
778000 -- (-38299.310) (-38313.496) (-38304.785) [-38307.150] * [-38303.818] (-38318.519) (-38304.614) (-38311.923) -- 0:32:46
779000 -- (-38302.240) (-38312.605) (-38311.231) [-38308.538] * [-38300.932] (-38316.278) (-38302.459) (-38305.859) -- 0:32:38
780000 -- (-38307.575) (-38310.808) (-38310.214) [-38309.986] * [-38294.895] (-38306.507) (-38311.811) (-38314.624) -- 0:32:29
Average standard deviation of split frequencies: 0.000765
781000 -- (-38307.532) (-38307.183) (-38301.653) [-38308.672] * (-38301.755) [-38303.170] (-38311.546) (-38302.998) -- 0:32:20
782000 -- (-38309.250) [-38301.316] (-38302.366) (-38302.532) * [-38301.643] (-38320.306) (-38315.165) (-38318.130) -- 0:32:11
783000 -- (-38309.857) [-38293.726] (-38301.484) (-38292.575) * [-38311.673] (-38313.999) (-38309.811) (-38303.005) -- 0:32:02
784000 -- (-38314.947) (-38310.666) (-38309.855) [-38299.541] * [-38309.870] (-38311.562) (-38311.963) (-38309.711) -- 0:31:53
785000 -- (-38309.179) (-38313.369) (-38301.427) [-38300.360] * [-38295.608] (-38309.286) (-38311.623) (-38310.724) -- 0:31:44
Average standard deviation of split frequencies: 0.000680
786000 -- (-38305.313) (-38304.716) (-38315.581) [-38312.485] * (-38309.594) (-38299.059) [-38299.572] (-38305.305) -- 0:31:36
787000 -- [-38298.218] (-38316.940) (-38309.794) (-38316.385) * [-38307.160] (-38303.461) (-38308.093) (-38304.211) -- 0:31:27
788000 -- (-38305.005) (-38309.081) (-38331.005) [-38303.197] * [-38297.724] (-38320.446) (-38311.847) (-38309.118) -- 0:31:18
789000 -- (-38301.516) [-38300.874] (-38325.855) (-38309.135) * [-38302.443] (-38314.729) (-38303.954) (-38301.350) -- 0:31:09
790000 -- [-38304.605] (-38302.289) (-38319.616) (-38313.705) * (-38294.324) (-38308.307) [-38305.408] (-38304.813) -- 0:31:00
Average standard deviation of split frequencies: 0.000676
791000 -- [-38301.199] (-38305.197) (-38325.541) (-38316.010) * (-38299.013) (-38312.320) [-38301.280] (-38312.027) -- 0:30:51
792000 -- (-38309.132) (-38306.774) [-38302.216] (-38311.868) * [-38303.847] (-38317.949) (-38320.715) (-38304.017) -- 0:30:43
793000 -- (-38308.313) (-38312.755) [-38298.532] (-38317.247) * (-38308.762) (-38310.919) [-38299.810] (-38304.340) -- 0:30:34
794000 -- (-38300.926) (-38320.855) (-38309.894) [-38302.317] * (-38309.820) (-38314.168) (-38299.985) [-38304.883] -- 0:30:25
795000 -- (-38319.442) (-38316.519) [-38304.838] (-38306.770) * (-38309.563) (-38318.785) [-38295.400] (-38303.764) -- 0:30:16
Average standard deviation of split frequencies: 0.000632
796000 -- (-38312.430) (-38317.789) (-38306.242) [-38295.686] * (-38329.197) (-38323.002) (-38303.318) [-38308.305] -- 0:30:07
797000 -- [-38307.657] (-38314.489) (-38310.282) (-38310.314) * [-38300.920] (-38308.895) (-38304.865) (-38304.811) -- 0:29:58
798000 -- (-38313.701) (-38302.404) (-38304.898) [-38297.731] * (-38307.426) (-38309.671) [-38312.008] (-38305.180) -- 0:29:50
799000 -- (-38317.337) (-38315.367) (-38298.383) [-38299.357] * (-38297.425) [-38312.311] (-38313.246) (-38312.402) -- 0:29:41
800000 -- (-38301.930) [-38304.782] (-38306.209) (-38303.541) * (-38301.839) (-38312.296) (-38310.385) [-38305.050] -- 0:29:32
Average standard deviation of split frequencies: 0.000432
801000 -- (-38314.697) (-38306.845) (-38305.658) [-38302.506] * (-38299.588) (-38311.929) [-38305.860] (-38308.474) -- 0:29:23
802000 -- [-38298.991] (-38303.952) (-38304.090) (-38310.228) * [-38303.506] (-38302.121) (-38305.791) (-38303.744) -- 0:29:14
803000 -- (-38303.230) [-38298.553] (-38308.599) (-38312.174) * (-38303.104) [-38301.502] (-38307.098) (-38302.530) -- 0:29:05
804000 -- [-38302.378] (-38299.519) (-38308.065) (-38308.357) * [-38300.317] (-38298.596) (-38313.905) (-38302.022) -- 0:28:56
805000 -- (-38315.988) (-38306.148) [-38307.635] (-38303.445) * (-38309.645) (-38305.989) [-38299.515] (-38299.847) -- 0:28:47
Average standard deviation of split frequencies: 0.001243
806000 -- (-38322.429) (-38300.526) (-38320.123) [-38307.176] * (-38311.445) [-38307.232] (-38310.347) (-38306.380) -- 0:28:39
807000 -- (-38302.018) [-38306.606] (-38318.612) (-38299.970) * (-38315.114) [-38311.280] (-38299.585) (-38316.251) -- 0:28:30
808000 -- [-38302.182] (-38312.987) (-38310.129) (-38298.289) * [-38306.625] (-38307.511) (-38309.008) (-38313.497) -- 0:28:21
809000 -- (-38315.249) (-38300.171) (-38306.124) [-38298.240] * [-38305.685] (-38305.435) (-38305.210) (-38303.090) -- 0:28:12
810000 -- (-38311.500) (-38305.804) [-38300.636] (-38310.404) * (-38311.211) (-38305.801) (-38304.333) [-38303.686] -- 0:28:03
Average standard deviation of split frequencies: 0.001308
811000 -- (-38304.914) (-38317.337) (-38303.745) [-38303.609] * (-38322.633) [-38302.931] (-38300.001) (-38304.732) -- 0:27:54
812000 -- (-38304.759) (-38310.990) (-38303.718) [-38303.255] * (-38309.921) (-38313.133) [-38305.795] (-38310.576) -- 0:27:46
813000 -- (-38308.786) (-38306.053) (-38309.087) [-38307.648] * (-38312.566) (-38318.979) (-38310.146) [-38307.093] -- 0:27:37
814000 -- (-38317.253) (-38308.005) [-38301.355] (-38318.469) * (-38301.951) (-38307.371) [-38302.185] (-38305.043) -- 0:27:28
815000 -- (-38315.038) (-38310.903) (-38310.239) [-38306.453] * (-38314.699) (-38308.382) (-38307.252) [-38305.894] -- 0:27:19
Average standard deviation of split frequencies: 0.001408
816000 -- (-38315.930) (-38316.306) (-38301.176) [-38304.638] * (-38304.091) [-38310.401] (-38318.021) (-38314.042) -- 0:27:10
817000 -- (-38303.795) (-38316.850) (-38305.098) [-38293.498] * (-38305.236) (-38312.975) (-38306.828) [-38301.036] -- 0:27:01
818000 -- [-38302.514] (-38323.096) (-38298.430) (-38302.897) * (-38311.668) (-38301.189) [-38304.391] (-38308.103) -- 0:26:52
819000 -- (-38309.734) (-38316.400) [-38299.524] (-38307.512) * (-38299.301) [-38304.689] (-38308.485) (-38326.681) -- 0:26:44
820000 -- (-38300.084) (-38328.854) [-38301.717] (-38306.522) * (-38310.559) [-38303.575] (-38325.035) (-38312.043) -- 0:26:35
Average standard deviation of split frequencies: 0.001436
821000 -- (-38301.897) [-38300.342] (-38310.939) (-38311.834) * (-38308.754) (-38304.491) (-38306.085) [-38302.310] -- 0:26:26
822000 -- [-38300.662] (-38303.033) (-38309.344) (-38315.522) * (-38317.084) (-38303.216) (-38309.777) [-38307.062] -- 0:26:17
823000 -- (-38314.353) (-38309.187) [-38297.281] (-38306.346) * [-38304.098] (-38310.768) (-38308.854) (-38306.661) -- 0:26:08
824000 -- (-38312.704) (-38303.222) (-38316.064) [-38305.845] * (-38300.091) (-38314.198) [-38306.076] (-38311.110) -- 0:25:59
825000 -- (-38309.444) (-38309.449) [-38317.302] (-38321.433) * [-38312.152] (-38307.127) (-38308.994) (-38307.595) -- 0:25:50
Average standard deviation of split frequencies: 0.001391
826000 -- (-38304.887) [-38303.607] (-38303.207) (-38305.452) * (-38321.600) [-38299.730] (-38302.167) (-38307.756) -- 0:25:41
827000 -- (-38315.355) [-38304.354] (-38297.256) (-38315.016) * (-38313.040) (-38310.262) [-38313.387] (-38314.123) -- 0:25:32
828000 -- [-38305.882] (-38312.399) (-38304.789) (-38313.445) * [-38311.477] (-38305.656) (-38306.777) (-38314.729) -- 0:25:24
829000 -- (-38311.775) (-38310.971) (-38302.968) [-38307.391] * [-38306.611] (-38319.868) (-38310.571) (-38313.213) -- 0:25:15
830000 -- (-38325.975) [-38301.756] (-38315.069) (-38306.857) * (-38309.707) (-38307.274) [-38294.316] (-38309.361) -- 0:25:06
Average standard deviation of split frequencies: 0.001277
831000 -- (-38305.556) [-38297.887] (-38314.713) (-38313.348) * [-38301.919] (-38305.298) (-38313.619) (-38304.177) -- 0:24:57
832000 -- [-38310.101] (-38315.362) (-38304.532) (-38311.541) * (-38299.211) (-38309.983) [-38309.843] (-38303.969) -- 0:24:48
833000 -- (-38309.191) (-38306.400) [-38308.704] (-38312.812) * [-38303.818] (-38309.723) (-38317.109) (-38299.692) -- 0:24:39
834000 -- (-38297.231) [-38297.562] (-38313.154) (-38315.133) * (-38313.153) (-38302.844) (-38311.218) [-38306.788] -- 0:24:30
835000 -- [-38298.948] (-38299.414) (-38316.701) (-38302.550) * (-38316.847) (-38301.298) (-38310.287) [-38308.932] -- 0:24:22
Average standard deviation of split frequencies: 0.000526
836000 -- [-38301.679] (-38314.278) (-38309.282) (-38311.796) * (-38304.369) [-38296.848] (-38314.760) (-38316.238) -- 0:24:13
837000 -- [-38302.447] (-38301.032) (-38315.780) (-38301.301) * (-38311.719) (-38298.490) [-38301.996] (-38303.310) -- 0:24:04
838000 -- (-38311.580) (-38317.002) (-38306.775) [-38298.754] * (-38313.158) [-38302.187] (-38299.694) (-38301.654) -- 0:23:55
839000 -- (-38304.097) (-38307.577) (-38312.937) [-38303.602] * (-38314.652) [-38307.481] (-38310.983) (-38305.853) -- 0:23:46
840000 -- (-38306.584) (-38311.224) (-38308.834) [-38300.455] * [-38307.936] (-38309.528) (-38314.938) (-38306.591) -- 0:23:37
Average standard deviation of split frequencies: 0.000598
841000 -- (-38309.455) (-38302.580) [-38304.232] (-38312.700) * [-38305.279] (-38298.566) (-38320.439) (-38321.420) -- 0:23:28
842000 -- [-38305.270] (-38312.368) (-38314.329) (-38317.358) * (-38307.959) [-38299.042] (-38307.086) (-38313.034) -- 0:23:20
843000 -- (-38305.044) [-38302.290] (-38312.897) (-38305.073) * (-38307.559) [-38299.546] (-38309.302) (-38317.477) -- 0:23:11
844000 -- (-38302.751) (-38309.958) (-38315.027) [-38305.117] * (-38307.277) (-38307.028) (-38303.105) [-38303.227] -- 0:23:02
845000 -- (-38308.950) [-38306.723] (-38302.711) (-38309.941) * (-38308.134) [-38305.890] (-38305.881) (-38306.160) -- 0:22:53
Average standard deviation of split frequencies: 0.000557
846000 -- [-38301.863] (-38314.528) (-38306.052) (-38301.187) * (-38322.894) [-38301.556] (-38306.772) (-38314.779) -- 0:22:44
847000 -- (-38310.082) [-38306.964] (-38307.833) (-38312.924) * (-38324.800) [-38298.471] (-38314.398) (-38310.250) -- 0:22:35
848000 -- (-38309.961) (-38309.484) [-38306.476] (-38298.295) * (-38312.721) (-38307.942) [-38304.256] (-38304.923) -- 0:22:26
849000 -- [-38306.195] (-38302.749) (-38313.527) (-38303.301) * (-38314.234) (-38311.366) (-38309.381) [-38306.663] -- 0:22:18
850000 -- [-38299.468] (-38303.995) (-38308.848) (-38298.803) * (-38303.465) (-38314.235) [-38298.026] (-38307.015) -- 0:22:09
Average standard deviation of split frequencies: 0.001281
851000 -- (-38301.028) [-38309.062] (-38307.722) (-38318.214) * (-38315.532) (-38306.338) [-38305.037] (-38305.327) -- 0:22:00
852000 -- (-38302.541) (-38300.489) (-38302.125) [-38300.586] * (-38308.769) (-38311.328) [-38305.137] (-38300.339) -- 0:21:51
853000 -- (-38295.853) (-38311.916) (-38305.800) [-38302.610] * (-38311.290) (-38299.487) [-38310.315] (-38302.743) -- 0:21:42
854000 -- [-38297.626] (-38316.287) (-38307.083) (-38308.266) * (-38315.182) [-38303.831] (-38307.594) (-38300.676) -- 0:21:33
855000 -- (-38302.795) (-38307.934) (-38304.754) [-38301.914] * (-38320.232) (-38301.075) [-38303.834] (-38302.158) -- 0:21:24
Average standard deviation of split frequencies: 0.001514
856000 -- (-38306.409) [-38302.484] (-38302.277) (-38315.749) * (-38314.832) (-38306.740) [-38301.188] (-38303.631) -- 0:21:15
857000 -- (-38307.404) (-38311.867) [-38298.184] (-38318.692) * (-38303.107) [-38298.676] (-38304.980) (-38307.066) -- 0:21:07
858000 -- (-38319.313) (-38305.669) [-38308.598] (-38311.662) * [-38307.958] (-38304.240) (-38311.734) (-38322.742) -- 0:20:58
859000 -- (-38319.429) [-38300.845] (-38305.356) (-38304.368) * (-38302.259) [-38302.792] (-38305.098) (-38315.938) -- 0:20:49
860000 -- (-38312.481) (-38309.440) (-38309.437) [-38318.031] * [-38305.544] (-38306.418) (-38315.622) (-38310.550) -- 0:20:40
Average standard deviation of split frequencies: 0.001506
861000 -- (-38311.559) (-38308.265) (-38306.632) [-38306.354] * (-38317.294) (-38311.192) (-38318.441) [-38306.662] -- 0:20:31
862000 -- [-38302.373] (-38309.981) (-38303.943) (-38316.091) * (-38301.287) (-38305.248) [-38310.956] (-38309.569) -- 0:20:22
863000 -- (-38304.711) (-38303.985) [-38305.118] (-38324.581) * (-38300.769) (-38312.419) [-38310.875] (-38312.741) -- 0:20:14
864000 -- (-38296.346) (-38306.512) [-38300.300] (-38315.197) * (-38300.011) (-38310.662) [-38307.911] (-38312.638) -- 0:20:05
865000 -- (-38300.668) [-38308.217] (-38304.228) (-38313.395) * (-38305.784) (-38304.355) [-38300.264] (-38302.171) -- 0:19:56
Average standard deviation of split frequencies: 0.001565
866000 -- [-38304.058] (-38316.783) (-38311.108) (-38306.674) * [-38298.565] (-38300.317) (-38310.534) (-38308.046) -- 0:19:47
867000 -- [-38309.935] (-38308.918) (-38309.940) (-38306.332) * (-38307.585) [-38306.619] (-38311.250) (-38310.214) -- 0:19:38
868000 -- (-38306.804) (-38298.993) (-38306.426) [-38306.090] * (-38301.837) [-38302.741] (-38308.481) (-38313.085) -- 0:19:29
869000 -- (-38318.037) [-38313.150] (-38302.767) (-38304.617) * (-38306.753) [-38300.596] (-38316.115) (-38314.840) -- 0:19:20
870000 -- (-38311.906) (-38312.310) (-38310.449) [-38303.227] * [-38301.005] (-38301.437) (-38300.389) (-38306.328) -- 0:19:12
Average standard deviation of split frequencies: 0.001489
871000 -- [-38297.910] (-38304.465) (-38308.399) (-38310.855) * (-38301.497) (-38307.572) [-38313.678] (-38314.886) -- 0:19:03
872000 -- [-38302.611] (-38301.615) (-38307.494) (-38309.470) * (-38307.343) (-38302.627) (-38314.195) [-38305.068] -- 0:18:54
873000 -- [-38300.639] (-38310.592) (-38302.833) (-38306.872) * (-38308.634) (-38315.839) [-38299.934] (-38308.220) -- 0:18:45
874000 -- (-38314.199) (-38314.582) (-38305.733) [-38307.446] * (-38312.834) (-38299.215) (-38309.450) [-38304.001] -- 0:18:36
875000 -- (-38313.419) (-38314.406) [-38302.721] (-38320.444) * (-38321.032) (-38309.100) [-38312.289] (-38303.254) -- 0:18:27
Average standard deviation of split frequencies: 0.001480
876000 -- (-38302.572) (-38307.963) [-38307.160] (-38317.045) * (-38309.818) [-38302.714] (-38307.695) (-38303.956) -- 0:18:18
877000 -- (-38305.575) [-38305.187] (-38308.766) (-38321.226) * (-38298.896) (-38304.562) [-38301.684] (-38306.319) -- 0:18:09
878000 -- (-38314.533) (-38310.945) [-38304.626] (-38308.698) * (-38302.376) [-38303.976] (-38307.156) (-38313.732) -- 0:18:00
879000 -- [-38305.816] (-38305.592) (-38317.675) (-38309.177) * (-38306.766) (-38301.545) [-38297.669] (-38315.618) -- 0:17:52
880000 -- (-38308.543) (-38301.867) (-38304.231) [-38309.361] * (-38301.990) (-38318.776) [-38296.232] (-38308.371) -- 0:17:43
Average standard deviation of split frequencies: 0.001171
881000 -- (-38301.904) (-38302.395) (-38312.007) [-38301.293] * (-38313.177) [-38304.409] (-38303.453) (-38307.452) -- 0:17:34
882000 -- (-38295.672) [-38303.824] (-38311.955) (-38307.793) * (-38308.295) [-38303.166] (-38306.186) (-38302.556) -- 0:17:25
883000 -- (-38301.837) (-38304.732) (-38301.680) [-38304.923] * (-38307.331) [-38303.456] (-38300.804) (-38301.240) -- 0:17:16
884000 -- (-38298.171) (-38323.042) [-38301.546] (-38305.100) * (-38313.439) [-38300.640] (-38303.913) (-38305.715) -- 0:17:07
885000 -- [-38306.752] (-38312.213) (-38306.075) (-38303.233) * [-38297.386] (-38303.450) (-38307.643) (-38315.548) -- 0:16:59
Average standard deviation of split frequencies: 0.001097
886000 -- [-38298.730] (-38309.722) (-38308.725) (-38304.102) * (-38305.020) (-38313.605) (-38308.730) [-38305.929] -- 0:16:50
887000 -- [-38298.883] (-38316.139) (-38303.162) (-38307.644) * [-38300.275] (-38324.067) (-38306.312) (-38311.099) -- 0:16:41
888000 -- (-38304.554) (-38311.319) [-38305.692] (-38311.972) * (-38302.488) (-38310.483) (-38312.612) [-38303.287] -- 0:16:32
889000 -- (-38304.253) (-38314.609) [-38310.133] (-38305.906) * (-38303.735) [-38305.939] (-38328.008) (-38306.104) -- 0:16:23
890000 -- (-38316.857) (-38311.524) (-38304.471) [-38302.364] * (-38317.995) [-38303.557] (-38312.253) (-38304.004) -- 0:16:14
Average standard deviation of split frequencies: 0.001092
891000 -- (-38314.464) (-38303.159) [-38311.123] (-38305.365) * [-38297.399] (-38310.268) (-38316.998) (-38304.928) -- 0:16:05
892000 -- (-38308.267) (-38306.614) [-38300.750] (-38303.167) * (-38304.955) (-38305.919) (-38313.448) [-38302.454] -- 0:15:56
893000 -- [-38309.191] (-38310.867) (-38306.657) (-38318.373) * (-38307.482) [-38306.469] (-38313.094) (-38308.319) -- 0:15:48
894000 -- [-38303.430] (-38324.712) (-38308.424) (-38318.462) * [-38307.854] (-38304.030) (-38296.256) (-38302.846) -- 0:15:39
895000 -- [-38298.553] (-38310.154) (-38310.580) (-38319.970) * (-38314.832) [-38298.001] (-38306.221) (-38311.093) -- 0:15:30
Average standard deviation of split frequencies: 0.001151
896000 -- (-38305.960) (-38309.381) [-38299.378] (-38315.710) * [-38305.092] (-38310.992) (-38315.870) (-38308.466) -- 0:15:21
897000 -- [-38301.980] (-38309.520) (-38319.757) (-38307.438) * (-38305.832) (-38311.386) (-38304.127) [-38303.885] -- 0:15:12
898000 -- (-38306.991) (-38313.153) [-38301.991] (-38316.148) * (-38304.147) (-38318.821) [-38309.009] (-38312.941) -- 0:15:03
899000 -- (-38302.790) (-38303.366) [-38300.890] (-38319.390) * (-38324.133) (-38307.619) (-38309.434) [-38305.439] -- 0:14:54
900000 -- (-38306.453) [-38304.498] (-38309.404) (-38306.179) * (-38319.045) [-38306.828] (-38306.995) (-38307.310) -- 0:14:46
Average standard deviation of split frequencies: 0.000981
901000 -- (-38310.691) [-38304.569] (-38307.943) (-38320.146) * (-38300.320) (-38304.625) [-38303.867] (-38318.033) -- 0:14:37
902000 -- (-38308.197) (-38307.693) [-38298.327] (-38309.280) * (-38316.370) [-38308.712] (-38305.899) (-38309.490) -- 0:14:28
903000 -- (-38315.018) (-38302.459) (-38301.412) [-38311.615] * (-38305.775) (-38308.828) [-38302.679] (-38316.466) -- 0:14:19
904000 -- (-38326.659) [-38311.022] (-38316.410) (-38308.886) * [-38304.472] (-38308.703) (-38308.036) (-38306.248) -- 0:14:10
905000 -- [-38302.821] (-38311.752) (-38315.665) (-38305.257) * [-38311.220] (-38306.913) (-38304.459) (-38304.110) -- 0:14:01
Average standard deviation of split frequencies: 0.000878
906000 -- (-38314.707) [-38303.196] (-38312.322) (-38303.032) * (-38315.318) [-38303.235] (-38304.648) (-38304.859) -- 0:13:52
907000 -- (-38312.481) (-38306.702) (-38315.308) [-38297.399] * (-38309.948) [-38303.007] (-38299.234) (-38299.169) -- 0:13:43
908000 -- (-38300.860) [-38308.547] (-38305.113) (-38297.145) * (-38302.936) (-38313.418) [-38296.832] (-38317.055) -- 0:13:35
909000 -- (-38303.087) (-38305.064) (-38315.406) [-38295.615] * [-38301.703] (-38318.214) (-38313.441) (-38303.784) -- 0:13:26
910000 -- (-38299.271) (-38312.470) [-38300.790] (-38303.387) * (-38302.734) (-38302.661) [-38299.352] (-38310.408) -- 0:13:17
Average standard deviation of split frequencies: 0.000552
911000 -- [-38306.999] (-38314.895) (-38306.608) (-38301.293) * (-38311.767) (-38311.185) [-38310.647] (-38315.359) -- 0:13:08
912000 -- (-38310.391) (-38314.316) (-38300.144) [-38303.233] * (-38307.475) [-38300.315] (-38310.559) (-38307.819) -- 0:12:59
913000 -- (-38300.797) (-38300.775) [-38307.005] (-38304.480) * (-38300.333) (-38302.227) (-38315.455) [-38298.470] -- 0:12:50
914000 -- (-38298.932) (-38312.659) [-38297.948] (-38310.342) * (-38298.410) (-38308.192) [-38304.893] (-38303.974) -- 0:12:41
915000 -- (-38304.117) (-38312.848) [-38309.852] (-38307.969) * [-38303.042] (-38308.002) (-38305.239) (-38302.667) -- 0:12:33
Average standard deviation of split frequencies: 0.000997
916000 -- (-38305.690) [-38304.530] (-38321.974) (-38303.080) * (-38314.406) [-38313.731] (-38305.501) (-38310.435) -- 0:12:24
917000 -- [-38307.084] (-38315.636) (-38303.706) (-38314.957) * (-38309.457) (-38312.794) [-38299.867] (-38316.248) -- 0:12:15
918000 -- (-38306.412) (-38307.467) [-38313.056] (-38307.051) * (-38309.280) (-38316.415) [-38308.345] (-38300.060) -- 0:12:06
919000 -- (-38310.370) (-38307.639) (-38306.665) [-38302.081] * [-38301.046] (-38317.006) (-38297.976) (-38309.018) -- 0:11:57
920000 -- (-38301.037) (-38301.519) [-38313.891] (-38303.384) * [-38301.681] (-38313.685) (-38300.902) (-38300.644) -- 0:11:48
Average standard deviation of split frequencies: 0.001024
921000 -- [-38298.147] (-38305.342) (-38306.965) (-38303.238) * (-38301.639) (-38310.160) (-38304.490) [-38307.432] -- 0:11:39
922000 -- [-38303.539] (-38296.628) (-38316.913) (-38315.854) * (-38323.641) (-38312.060) (-38311.856) [-38301.780] -- 0:11:30
923000 -- (-38307.013) (-38304.850) (-38309.303) [-38308.313] * (-38305.593) (-38308.001) [-38303.876] (-38313.189) -- 0:11:22
924000 -- [-38310.070] (-38311.760) (-38312.218) (-38313.192) * (-38308.152) [-38299.974] (-38311.872) (-38307.811) -- 0:11:13
925000 -- (-38312.519) [-38302.905] (-38306.583) (-38311.044) * (-38309.695) [-38305.455] (-38298.707) (-38310.827) -- 0:11:04
Average standard deviation of split frequencies: 0.001050
926000 -- (-38317.537) (-38303.025) [-38297.141] (-38305.863) * (-38311.727) (-38308.201) [-38295.902] (-38297.670) -- 0:10:55
927000 -- (-38308.091) [-38301.442] (-38307.112) (-38306.984) * (-38310.747) (-38308.281) [-38301.168] (-38307.952) -- 0:10:46
928000 -- (-38327.271) (-38299.755) [-38306.468] (-38313.004) * (-38319.651) [-38299.451] (-38300.068) (-38315.878) -- 0:10:37
929000 -- (-38308.280) [-38295.302] (-38312.843) (-38314.625) * (-38327.564) (-38304.122) (-38300.783) [-38305.554] -- 0:10:28
930000 -- (-38305.837) [-38303.546] (-38306.893) (-38305.412) * (-38314.648) [-38305.222] (-38304.439) (-38303.966) -- 0:10:20
Average standard deviation of split frequencies: 0.000981
931000 -- [-38299.182] (-38298.496) (-38308.466) (-38310.124) * (-38304.563) (-38318.250) [-38310.125] (-38301.230) -- 0:10:11
932000 -- (-38310.500) (-38317.765) (-38321.077) [-38304.339] * (-38311.779) (-38310.561) [-38301.551] (-38306.613) -- 0:10:02
933000 -- [-38307.534] (-38303.417) (-38312.212) (-38310.587) * (-38308.998) (-38302.760) [-38305.768] (-38319.200) -- 0:09:53
934000 -- (-38313.568) (-38311.056) [-38303.744] (-38317.834) * (-38318.092) (-38303.934) (-38306.081) [-38299.836] -- 0:09:44
935000 -- (-38308.498) [-38301.225] (-38312.023) (-38322.536) * (-38313.173) [-38319.353] (-38304.086) (-38300.163) -- 0:09:35
Average standard deviation of split frequencies: 0.000604
936000 -- [-38306.043] (-38306.647) (-38310.300) (-38327.518) * [-38315.926] (-38302.333) (-38307.635) (-38314.440) -- 0:09:26
937000 -- (-38316.811) [-38298.568] (-38319.293) (-38309.716) * (-38314.949) (-38306.966) (-38298.435) [-38308.231] -- 0:09:17
938000 -- (-38317.948) (-38305.202) [-38299.230] (-38308.644) * (-38314.445) [-38306.523] (-38303.228) (-38313.391) -- 0:09:09
939000 -- (-38306.010) (-38315.387) [-38301.680] (-38298.775) * (-38299.338) (-38308.285) [-38300.948] (-38302.894) -- 0:09:00
940000 -- (-38301.634) (-38317.120) [-38303.957] (-38304.956) * [-38304.219] (-38305.424) (-38303.315) (-38305.559) -- 0:08:51
Average standard deviation of split frequencies: 0.000635
941000 -- (-38304.039) (-38300.753) [-38294.259] (-38324.107) * (-38301.900) (-38302.385) [-38293.579] (-38307.140) -- 0:08:42
942000 -- (-38305.819) (-38313.439) [-38299.550] (-38325.968) * (-38308.969) [-38305.263] (-38308.602) (-38307.313) -- 0:08:33
943000 -- (-38308.532) [-38307.593] (-38307.311) (-38306.259) * [-38316.684] (-38302.071) (-38313.125) (-38303.678) -- 0:08:24
944000 -- (-38308.216) (-38314.878) [-38308.029] (-38329.479) * (-38305.939) (-38307.341) (-38313.565) [-38309.591] -- 0:08:15
945000 -- [-38315.770] (-38315.779) (-38298.346) (-38305.435) * (-38307.330) (-38309.707) [-38298.433] (-38306.204) -- 0:08:07
Average standard deviation of split frequencies: 0.000598
946000 -- (-38306.157) (-38314.364) [-38303.505] (-38309.754) * (-38305.231) [-38309.303] (-38301.580) (-38323.550) -- 0:07:58
947000 -- (-38311.730) (-38310.600) (-38296.865) [-38310.809] * (-38305.848) [-38302.139] (-38301.093) (-38310.770) -- 0:07:49
948000 -- (-38306.200) [-38301.737] (-38311.037) (-38315.044) * (-38304.438) [-38301.371] (-38321.296) (-38298.661) -- 0:07:40
949000 -- (-38304.458) (-38308.396) (-38309.833) [-38300.564] * (-38312.239) (-38305.778) (-38309.415) [-38299.132] -- 0:07:31
950000 -- [-38303.007] (-38309.007) (-38310.175) (-38305.744) * (-38307.515) (-38299.929) (-38308.842) [-38302.373] -- 0:07:22
Average standard deviation of split frequencies: 0.000595
951000 -- (-38302.013) (-38324.111) (-38308.943) [-38302.201] * (-38301.408) [-38306.628] (-38301.692) (-38319.607) -- 0:07:13
952000 -- [-38298.837] (-38327.442) (-38314.151) (-38308.194) * (-38308.550) (-38310.613) (-38301.023) [-38304.201] -- 0:07:05
953000 -- [-38301.834] (-38318.036) (-38310.063) (-38298.313) * [-38308.096] (-38304.865) (-38305.529) (-38307.379) -- 0:06:56
954000 -- (-38304.528) (-38301.896) (-38322.406) [-38304.276] * [-38308.996] (-38313.898) (-38307.008) (-38318.181) -- 0:06:47
955000 -- (-38320.903) (-38310.948) (-38318.677) [-38297.130] * (-38307.128) (-38317.619) [-38309.202] (-38318.785) -- 0:06:38
Average standard deviation of split frequencies: 0.000657
956000 -- (-38299.094) [-38302.907] (-38314.310) (-38301.284) * (-38310.127) (-38315.219) [-38301.582] (-38302.482) -- 0:06:29
957000 -- (-38311.621) (-38303.646) (-38304.096) [-38307.854] * (-38314.156) (-38310.877) (-38299.515) [-38298.015] -- 0:06:20
958000 -- (-38299.667) [-38293.818] (-38310.724) (-38304.197) * (-38306.061) (-38312.254) [-38301.127] (-38296.749) -- 0:06:11
959000 -- (-38300.299) (-38309.979) (-38305.553) [-38299.718] * [-38313.106] (-38317.920) (-38308.470) (-38304.897) -- 0:06:03
960000 -- (-38306.513) (-38313.083) [-38307.274] (-38311.042) * [-38310.742] (-38302.896) (-38307.602) (-38314.919) -- 0:05:54
Average standard deviation of split frequencies: 0.000622
961000 -- (-38309.219) (-38307.853) (-38312.926) [-38304.222] * [-38309.031] (-38309.300) (-38310.937) (-38306.428) -- 0:05:45
962000 -- (-38308.618) (-38324.468) [-38304.522] (-38307.439) * (-38306.664) (-38311.431) (-38312.789) [-38304.491] -- 0:05:36
963000 -- [-38305.870] (-38320.481) (-38300.680) (-38310.192) * (-38320.403) [-38301.312] (-38313.150) (-38309.431) -- 0:05:27
964000 -- [-38307.723] (-38303.152) (-38314.357) (-38307.957) * (-38308.018) (-38306.690) (-38311.073) [-38302.474] -- 0:05:18
965000 -- (-38311.803) (-38312.195) (-38311.614) [-38301.848] * (-38304.881) [-38310.208] (-38316.500) (-38303.547) -- 0:05:09
Average standard deviation of split frequencies: 0.000716
966000 -- (-38304.830) (-38302.866) [-38307.692] (-38305.677) * (-38313.568) [-38305.671] (-38310.831) (-38310.802) -- 0:05:01
967000 -- [-38303.819] (-38309.527) (-38310.873) (-38304.607) * [-38305.761] (-38319.990) (-38311.205) (-38315.476) -- 0:04:52
968000 -- (-38313.381) (-38311.446) [-38301.954] (-38307.814) * (-38307.817) (-38316.741) (-38318.870) [-38306.985] -- 0:04:43
969000 -- (-38308.532) (-38305.468) (-38300.537) [-38306.168] * (-38301.710) [-38301.633] (-38317.973) (-38305.398) -- 0:04:34
970000 -- (-38321.688) (-38303.177) [-38304.092] (-38300.081) * (-38300.870) (-38318.179) (-38305.343) [-38304.871] -- 0:04:25
Average standard deviation of split frequencies: 0.000745
971000 -- (-38302.474) (-38301.733) [-38304.571] (-38299.044) * (-38301.919) (-38311.203) [-38319.564] (-38296.481) -- 0:04:16
972000 -- (-38307.705) [-38300.632] (-38312.880) (-38319.452) * (-38314.101) (-38312.982) (-38306.657) [-38301.373] -- 0:04:07
973000 -- [-38297.776] (-38318.721) (-38319.838) (-38305.825) * (-38321.227) [-38307.278] (-38306.097) (-38306.229) -- 0:03:59
974000 -- (-38301.536) (-38314.053) (-38304.631) [-38303.730] * (-38301.643) (-38308.116) [-38299.886] (-38301.340) -- 0:03:50
975000 -- (-38304.678) (-38300.314) (-38316.774) [-38304.364] * [-38305.025] (-38301.051) (-38309.269) (-38303.600) -- 0:03:41
Average standard deviation of split frequencies: 0.000805
976000 -- (-38309.085) (-38313.585) [-38306.798] (-38307.902) * (-38307.570) (-38305.983) [-38307.612] (-38321.775) -- 0:03:32
977000 -- [-38306.933] (-38311.244) (-38316.026) (-38304.120) * [-38298.341] (-38315.209) (-38305.484) (-38305.322) -- 0:03:23
978000 -- (-38316.459) [-38304.730] (-38313.936) (-38303.069) * (-38307.277) (-38311.757) [-38298.796] (-38301.537) -- 0:03:14
979000 -- (-38308.149) [-38300.215] (-38316.390) (-38308.851) * (-38304.781) (-38308.896) [-38302.363] (-38300.473) -- 0:03:05
980000 -- (-38309.298) [-38303.804] (-38298.178) (-38322.025) * (-38310.861) [-38308.287] (-38312.343) (-38303.540) -- 0:02:57
Average standard deviation of split frequencies: 0.000705
981000 -- (-38318.569) (-38305.984) [-38293.763] (-38304.071) * (-38303.858) (-38305.464) (-38309.116) [-38301.108] -- 0:02:48
982000 -- (-38311.253) [-38304.709] (-38308.400) (-38309.860) * (-38307.932) (-38313.463) [-38299.556] (-38309.116) -- 0:02:39
983000 -- [-38295.255] (-38306.370) (-38307.943) (-38308.765) * (-38311.498) (-38316.480) (-38307.953) [-38301.717] -- 0:02:30
984000 -- (-38309.344) (-38305.853) [-38308.032] (-38307.490) * [-38304.376] (-38309.531) (-38304.885) (-38312.762) -- 0:02:21
985000 -- (-38308.911) (-38304.843) (-38316.761) [-38297.931] * [-38313.194] (-38308.367) (-38303.980) (-38311.486) -- 0:02:12
Average standard deviation of split frequencies: 0.000637
986000 -- (-38311.021) [-38299.785] (-38308.274) (-38319.186) * (-38308.075) (-38314.272) (-38310.980) [-38303.782] -- 0:02:03
987000 -- (-38315.000) (-38313.015) [-38310.013] (-38312.682) * [-38317.337] (-38302.548) (-38312.736) (-38298.953) -- 0:01:55
988000 -- (-38315.087) [-38309.792] (-38306.738) (-38315.335) * (-38303.720) (-38301.262) [-38307.009] (-38297.021) -- 0:01:46
989000 -- [-38307.246] (-38301.280) (-38307.877) (-38313.173) * (-38304.036) (-38313.002) (-38307.486) [-38306.733] -- 0:01:37
990000 -- (-38305.774) (-38306.272) (-38314.507) [-38307.649] * (-38302.989) [-38300.603] (-38308.429) (-38316.521) -- 0:01:28
Average standard deviation of split frequencies: 0.000666
991000 -- (-38311.809) (-38308.426) (-38306.908) [-38300.050] * (-38309.224) (-38315.030) [-38311.181] (-38301.425) -- 0:01:19
992000 -- (-38303.489) (-38313.224) [-38305.423] (-38309.002) * [-38311.451] (-38313.292) (-38306.713) (-38308.483) -- 0:01:10
993000 -- (-38306.742) (-38313.362) [-38297.144] (-38309.365) * [-38302.574] (-38315.927) (-38302.273) (-38306.299) -- 0:01:01
994000 -- (-38301.025) (-38315.226) [-38301.644] (-38303.309) * (-38297.319) [-38296.458] (-38301.170) (-38307.170) -- 0:00:53
995000 -- [-38311.052] (-38310.175) (-38309.795) (-38301.583) * (-38314.049) [-38302.107] (-38320.724) (-38307.024) -- 0:00:44
Average standard deviation of split frequencies: 0.000976
996000 -- (-38307.719) (-38308.046) (-38304.597) [-38299.226] * (-38312.199) [-38305.865] (-38305.413) (-38310.457) -- 0:00:35
997000 -- (-38310.859) (-38322.980) (-38312.175) [-38303.065] * (-38321.661) [-38297.680] (-38308.948) (-38306.601) -- 0:00:26
998000 -- (-38322.362) (-38318.984) [-38302.860] (-38304.452) * [-38307.343] (-38300.752) (-38312.666) (-38303.273) -- 0:00:17
999000 -- (-38307.303) (-38306.680) [-38300.029] (-38296.467) * (-38298.848) (-38301.637) (-38305.255) [-38314.461] -- 0:00:08
1000000 -- (-38316.020) [-38295.695] (-38313.268) (-38310.429) * (-38304.474) [-38303.218] (-38312.956) (-38305.296) -- 0:00:00
Average standard deviation of split frequencies: 0.000565
Analysis completed in 2 hours 27 mins 31 seconds
Analysis used 8841.36 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -38290.25
Likelihood of best state for "cold" chain of run 2 was -38290.37
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
9.0 % ( 17 %) Dirichlet(Revmat{all})
26.4 % ( 31 %) Slider(Revmat{all})
2.6 % ( 6 %) Dirichlet(Pi{all})
14.7 % ( 18 %) Slider(Pi{all})
23.3 % ( 25 %) Multiplier(Alpha{1,2})
29.7 % ( 26 %) Multiplier(Alpha{3})
23.2 % ( 19 %) Slider(Pinvar{all})
0.3 % ( 0 %) ExtSPR(Tau{all},V{all})
0.4 % ( 0 %) ExtTBR(Tau{all},V{all})
0.5 % ( 0 %) NNI(Tau{all},V{all})
0.4 % ( 0 %) ParsSPR(Tau{all},V{all})
25.6 % ( 22 %) Multiplier(V{all})
9.8 % ( 10 %) Nodeslider(V{all})
21.7 % ( 27 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
9.2 % ( 12 %) Dirichlet(Revmat{all})
26.8 % ( 27 %) Slider(Revmat{all})
2.6 % ( 1 %) Dirichlet(Pi{all})
14.9 % ( 21 %) Slider(Pi{all})
22.5 % ( 24 %) Multiplier(Alpha{1,2})
29.9 % ( 25 %) Multiplier(Alpha{3})
23.0 % ( 24 %) Slider(Pinvar{all})
0.3 % ( 0 %) ExtSPR(Tau{all},V{all})
0.5 % ( 0 %) ExtTBR(Tau{all},V{all})
0.5 % ( 0 %) NNI(Tau{all},V{all})
0.4 % ( 0 %) ParsSPR(Tau{all},V{all})
25.7 % ( 18 %) Multiplier(V{all})
9.8 % ( 5 %) Nodeslider(V{all})
21.5 % ( 19 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.74 0.52 0.36
2 | 166539 0.76 0.56
3 | 166788 167021 0.78
4 | 166782 166211 166659
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.74 0.53 0.37
2 | 166542 0.76 0.56
3 | 166804 166316 0.78
4 | 167189 166014 167135
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -38301.53
| 1 |
| 1 1 1 2 |
| 1 1 2 11 1 1|
| 2 2 1 22 1 |
| 1 1 1 2 2 1 1 1* 1 1 |
| 1 *1 1 2 2 111 2 2 |
| 2 2 2 2 112 2 2 2121 * 11 12|
| 1 111 21 2 1 * 11 1 121 22 1 1 |
|1 2 * *12 1 2 2 |
|2 212 2 22 11 2 2 2 2 2 |
| 21 2 2 2 2 |
| 2 2 |
| 2 2 2 |
| 2 |
| 2 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -38307.42
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -38297.29 -38315.68
2 -38297.57 -38314.14
--------------------------------------
TOTAL -38297.42 -38315.19
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 12.189746 0.239712 11.303160 13.249910 12.172940 1027.40 1036.94 1.002
r(A<->C){all} 0.183159 0.000062 0.167276 0.198417 0.183099 376.61 706.55 1.000
r(A<->G){all} 0.273996 0.000087 0.255160 0.291219 0.273827 502.00 508.10 1.002
r(A<->T){all} 0.095238 0.000021 0.085959 0.103832 0.095221 703.00 812.53 1.000
r(C<->G){all} 0.120400 0.000051 0.106770 0.134523 0.120397 719.08 822.91 1.000
r(C<->T){all} 0.268801 0.000075 0.251500 0.285372 0.268645 516.51 569.04 1.002
r(G<->T){all} 0.058406 0.000015 0.050413 0.065507 0.058439 904.98 961.84 1.000
pi(A){all} 0.247913 0.000016 0.239245 0.254959 0.247983 494.71 504.91 1.000
pi(C){all} 0.190849 0.000011 0.184871 0.197486 0.190765 683.48 695.42 1.000
pi(G){all} 0.196018 0.000015 0.188050 0.203113 0.195908 627.26 645.07 1.000
pi(T){all} 0.365220 0.000024 0.355768 0.374912 0.365189 530.56 556.09 1.001
alpha{1,2} 0.525910 0.000551 0.479090 0.568085 0.525167 1066.28 1197.92 1.001
alpha{3} 4.578533 0.378930 3.458001 5.782537 4.526577 1355.44 1428.22 1.000
pinvar{all} 0.003815 0.000007 0.000002 0.008887 0.003352 1280.72 1338.79 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C11
4 -- C12
5 -- C13
6 -- C14
7 -- C15
8 -- C16
9 -- C17
10 -- C18
11 -- C2
12 -- C3
13 -- C4
14 -- C5
15 -- C6
16 -- C7
17 -- C8
18 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------------
1 -- .*****************
2 -- .*................
3 -- ..*...............
4 -- ...*..............
5 -- ....*.............
6 -- .....*............
7 -- ......*...........
8 -- .......*..........
9 -- ........*.........
10 -- .........*........
11 -- ..........*.......
12 -- ...........*......
13 -- ............*.....
14 -- .............*....
15 -- ..............*...
16 -- ...............*..
17 -- ................*.
18 -- .................*
19 -- ..***.........*...
20 -- ..*...........*...
21 -- ...**.............
22 -- ............**....
23 -- .....*..**........
24 -- .....*...*........
25 -- ..........**......
26 -- .*...*..**..**.***
27 -- .*****..**..******
28 -- .*****.***********
29 -- .*..........**.***
30 -- .*...............*
31 -- .*.............*.*
32 -- .*.............***
33 -- .*****..**********
------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
19 3002 1.000000 0.000000 1.000000 1.000000 2
20 3002 1.000000 0.000000 1.000000 1.000000 2
21 3002 1.000000 0.000000 1.000000 1.000000 2
22 3002 1.000000 0.000000 1.000000 1.000000 2
23 3002 1.000000 0.000000 1.000000 1.000000 2
24 3002 1.000000 0.000000 1.000000 1.000000 2
25 3002 1.000000 0.000000 1.000000 1.000000 2
26 3002 1.000000 0.000000 1.000000 1.000000 2
27 3002 1.000000 0.000000 1.000000 1.000000 2
28 3002 1.000000 0.000000 1.000000 1.000000 2
29 3002 1.000000 0.000000 1.000000 1.000000 2
30 3002 1.000000 0.000000 1.000000 1.000000 2
31 2993 0.997002 0.001413 0.996003 0.998001 2
32 2859 0.952365 0.004240 0.949367 0.955363 2
33 2602 0.866755 0.002827 0.864757 0.868754 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.007922 0.000005 0.003618 0.012171 0.007746 1.000 2
length{all}[2] 0.051501 0.000091 0.032741 0.069889 0.051114 1.000 2
length{all}[3] 0.506888 0.001570 0.429146 0.580686 0.505394 1.000 2
length{all}[4] 0.188885 0.000538 0.145405 0.236412 0.188297 1.002 2
length{all}[5] 0.097894 0.000438 0.058044 0.139209 0.097360 1.000 2
length{all}[6] 0.326006 0.000808 0.271348 0.379793 0.325342 1.000 2
length{all}[7] 0.003479 0.000003 0.000447 0.006536 0.003278 1.000 2
length{all}[8] 0.058114 0.000072 0.041949 0.074738 0.058057 1.000 2
length{all}[9] 0.473956 0.002611 0.373648 0.568595 0.472841 1.000 2
length{all}[10] 0.393090 0.000917 0.333990 0.450421 0.392303 1.000 2
length{all}[11] 0.000487 0.000000 0.000000 0.001486 0.000316 1.000 2
length{all}[12] 0.000500 0.000000 0.000000 0.001470 0.000344 1.000 2
length{all}[13] 0.066954 0.000286 0.033661 0.100111 0.066552 1.002 2
length{all}[14] 0.092791 0.000304 0.057820 0.125920 0.092592 1.004 2
length{all}[15] 0.439493 0.001468 0.364041 0.513263 0.437628 1.000 2
length{all}[16] 0.499749 0.001254 0.428563 0.565525 0.499000 1.000 2
length{all}[17] 0.428803 0.001357 0.357596 0.501442 0.428027 1.000 2
length{all}[18] 0.045693 0.000085 0.027939 0.064122 0.045280 1.000 2
length{all}[19] 0.842026 0.009842 0.648730 1.038979 0.837051 1.000 2
length{all}[20] 0.321011 0.002648 0.225802 0.426088 0.320332 1.001 2
length{all}[21] 0.455708 0.003240 0.347893 0.565160 0.454068 1.001 2
length{all}[22] 0.724067 0.007852 0.561826 0.910614 0.717538 1.001 2
length{all}[23] 0.915416 0.014208 0.686407 1.155146 0.913383 1.000 2
length{all}[24] 0.174780 0.001895 0.089847 0.259688 0.172928 1.000 2
length{all}[25] 0.222313 0.001653 0.152285 0.303699 0.219799 1.000 2
length{all}[26] 0.521434 0.010471 0.325230 0.713323 0.517420 1.001 2
length{all}[27] 1.186610 0.013276 0.959766 1.414132 1.180391 1.000 2
length{all}[28] 0.095337 0.000189 0.067510 0.121769 0.096763 1.003 2
length{all}[29] 2.322212 0.052757 1.891970 2.778947 2.308717 1.002 2
length{all}[30] 0.354023 0.000881 0.300322 0.417508 0.353333 1.000 2
length{all}[31] 0.123130 0.000835 0.069338 0.183799 0.122735 1.000 2
length{all}[32] 0.190548 0.004726 0.060816 0.321107 0.187802 1.001 2
length{all}[33] 0.071274 0.001038 0.009440 0.132662 0.069789 1.000 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.000565
Maximum standard deviation of split frequencies = 0.004240
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.004
Clade credibility values:
/---------------------------------------------------------------------- C1 (1)
|
|---------------------------------------------------------------------- C15 (7)
|
| /-------- C10 (2)
| /--100--+
| | \-------- C9 (18)
| /--100-+
| | \---------------- C7 (16)
| /---95--+
| | \----------------------- C8 (17)
| /--100--+
| | | /-------- C4 (13)
| | \----------100---------+
| | \-------- C5 (14)
+ /--100--+
| | | /-------- C14 (6)
| | | /--100--+
| | | | \-------- C18 (10)
| | \----------100---------+
| /--100-+ \---------------- C17 (9)
| | |
| | | /-------- C11 (3)
| | | /--100--+
| | | | \-------- C6 (15)
| | \--------------100-------------+
| /---87--+ | /-------- C12 (4)
| | | \--100--+
| | | \-------- C13 (5)
| | |
\--100--+ | /-------- C2 (11)
| \---------------------100---------------------+
| \-------- C3 (12)
|
\-------------------------------------------------------------- C16 (8)
Phylogram (based on average branch lengths):
/ C1 (1)
|
| C15 (7)
|
| /- C10 (2)
| /----+
| | \- C9 (18)
| /-+
| | \------- C7 (16)
| /--+
| | \------ C8 (17)
| /-------------------------------+
| | | /- C4 (13)
| | \----------+
| | \- C5 (14)
+ /-------+
| | | /----- C14 (6)
| | | /-+
| | | | \------ C18 (10)
| | \------------+
| /----------------+ \------ C17 (9)
| | |
| | | /------- C11 (3)
| | | /----+
| | | | \------ C6 (15)
| | \-----------+
|/+ | /-- C12 (4)
||| \------+
||| \- C13 (5)
|||
\+| / C2 (11)
|\---+
| \ C3 (12)
|
\- C16 (8)
|-------------| 1.000 expected changes per site
Calculating tree probabilities...
Credible sets of trees (11 trees sampled):
90 % credible set contains 2 trees
95 % credible set contains 3 trees
99 % credible set contains 5 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Thu Oct 27 00:04:09 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.14 sec, SCORE=998, Nseq=18, Len=1552
C1 ---MFIVFLISYTTFLIPY-------------TATTTCFSGPTTENK-LN
C2 -----MLILFVFLPFITAD-----------------TCLNFTNLAAPAYN
C3 -----MLILFVFLPFITAD-----------------TCLNFTNLAAPAYN
C4 MLRNKKFLSLFVFSVVLPCAY-----------SNTGTCSNTINRFMY-LK
C5 MLRNKKFLSLFVFSVVLPCAY-----------SNTGTCSSTINRFMY-LK
C6 ----MWAILLILPAVLA------RPSCI-KS-SVSLSSIEHNVTYQS-FV
C7 -MILSLLLLVIAVCVNNNYAWLGLQRNAIPPSNQDGECGGDPGKLPN-LN
C8 ----MLFLAVYAAELLVLITQIPAVFSYG---GERFTCSPNYASLPN-LN
C9 ----MLSLAVYFAELLVIISYLPDLVT-----GDLNGCADGHNRLPN-LN
C10 ----MLSLAIYIAEILAFLQ-LPDLTTGAP--NKDGDCGDGYNRLPN-LN
C11 ----MLLTVVLSLALIACDASATRPECFANS-NFQLYPRNHTVNITS-LS
C12 ----MVVLLFVMFSLVVAD----RPNCYLP--QYSYTISPATITNTSYFN
C13 ----MVVLLFAILSIALAD----RPLCTINTGNYVLNPIQANITYTVVNS
C14 ----MTRLMCLLMSLLIFVRGCEAQFVDMSPASNNSECLDSQVDAAAFSK
C15 ---MFIVFLISYTTFLIPY-------------TATTTCFSGPTIENK-LN
C16 ----MKILIFAFLVTLV---------------KAQEGCGVINLKTQPTLT
C17 -MTYSVSLLMCLLTFIGAN----AKIVSIPGGVGTGACPQVDMQPSYFIK
C18 ----MTHLMFLLMFLLTPI----RGDVDLGPDSTRDTCDEVVVQVSA-FQ
C1 IS-------SGSRGVY-YPDDIFR---------S-NVSVLVTGRFLRFNT
C2 IA------SSSRRGVY-YPDDIFR---------S-DFLHLVNDYFLPFGS
C3 IA------SSSRRGVY-YPDDIFR---------S-DFLHLVNDYFLPFGS
C4 LGLPESVNDAYVSGYLPVRDNWTCS------AGF-WQYYNAHAIFMSYYS
C5 LGLPESVNDAYVSGYLPVRDNWTCS------AGF-WQYYNAHAIFMSYYS
C6 LS---------KVSCL-LPDPFIA----------YSGQTLKQSIYYADTT
C7 LGLPPN-KTVFVSGYLPLHKGWVCPTHPLGGGGYGTTFNDIHAIYWSYHS
C8 LGLPPN-STVLVSGYLPRPGDWVC------YTGT-TTHDNIRGVFWSYYS
C9 LGLPPN-STVFVSGYLPRKNGWECPTINNQYGGS-TNYENVHGIFWSYHS
C10 LGLPPN-STVFVSGYLPQKTGWVCP--ENKEAGA-TSYEGVHGVFWSYYA
C11 VN---------VANLL-LPDPYIA----------YSGQTLRQNLFMADLS
C12 VN---------PISIV-VPEFSVA----------RTNLVVRQRLQVAAYD
C13 IN---------PVSLV-VPEFSIA----------RTNLVVRQRLYVA-AT
C14 LMWPYPIDPSKVDGII-YPVGRTY----------SNITLSYTGLFPLQGD
C15 IS-------SGSRGVY-YPDDIFR---------S-NVSVLVTGRFLRFNT
C16 QV------SSSRRGVY-YNDDIFR---------S-DVLHLTQDYFLPFHS
C17 HNWPEPIDMNKADGVI-YPNGRTY----------SNITLQTTNLFPRNGD
C18 KDWPQPINPLFADGII-YPTGRSY----------SNISLSYQGLFPRQGD
.
C1 TLTWYN------S---WN----------QAYSSPVLPFGHG--VYFST--
C2 NVTQFY------T---QG----------TNIDNPTLPFRDG--VYFAA--
C3 NVTQFY------T---QG----------TNIDNPTLPFRDG--VYFAA--
C4 TAMDFAIGVGSSKSYN------------TKWGLYFWQKNNGYRAVFRICK
C5 TAMDFAIGVGSSKSYN------------TKWGLYFWQKNNGYRAVFRICK
C6 NVTVYPVTPYKKD--SKA----------TMYNTTQVLVGNG--LFVHTYM
C7 TANAVELAVSSGNGSVTR----------D-WSLYVHHSNNQGYMYFKICR
C8 HGSAVAIGISNKDQTTTP----------DQWALFAHHSNNGGQFYLRICK
C9 TAQRFELGVSNKDQLVNT----------NRWALYVYQNNNEGVLKLRICK
C10 TGQDVEIGVSNFRQLNNT----------NRWALYVHQKNNDHVLHFRICK
C11 RTIIYPITPPAKDS-TGG----------YIYNTTILPVASG--LFVHTWM
C12 -FTKIPITPPHRS----------------IFNNTYFRVGDG--ILVNTHM
C13 NFTRIPITPPGRA---------------VIFNNTYFDAEDG--FFVNTHM
C14 LGTQYLYSVSHAVGHDGDPTTAYI----SNYSLLVNAFDNGFVVRIGAAA
C15 TLTWYN------S---WN----------QAYSSPVLPFGHG--VYFST--
C16 NLTQYFSLNIESD---KI----------VYFDNPILKFGDG--VYFAA--
C17 LGTQYVYSASNEKSRTSNVAFI------SNYSYYGNPFGDGIVIRIGQNS
C18 LGRQYIYSVTHAGDSTLYPPQGIGKHFISNYSAETLPFGNGFVVRIGFSA
.
C1 IDKSNVVRGW--------------IFGTTLDNTTQSA---------LLV-
C2 TEKSNIVRGW--------------IFGSTLDSTSQSA---------IIL-
C3 TEKSNIVRGW--------------IFGSTLDSTSQSA---------IIL-
C4 W-DSKIEPSFQPSNQQARECLINKEFYMGFGHAKNQIFGVSWSGNRVTLH
C5 W-DSKIEPSFKPSNQQARECLINKEFYMGFGHALNQIFGVSWSGNRVTLH
C6 YREQDSSTY--------CQEPFGVVFGTTFEQDRIAI---------IMIV
C7 W-GAVYPLNLSPNHNRG-DCLVNRKFNFRFLHGANQVLGVTWSSNYVTLY
C8 WLNGG-NLDWATESSRG-LCIVNRKFRFQFSHAAGQVIGVTWSSNVVTFY
C9 WLRGQYSLQWLHGARHG-QCAVDRAFNFRFVHAENQVLGVTWSSNYVTFY
C10 WLAGTYTPQSRPWSRYG-QCAVDKRISFTFEHQGNQVLGVTWSSNYVTFY
C11 YRQESTSRTY-------CQEPFGVAFGDTFIQDRIAI---------VIIA
C12 YHRTNIATNLG-SSFYGCQEPFGAAFGNTFVNEPITL---------VMFY
C13 YHTNNIATSPNKPNFYGCQEPFGVAFGNTFENEPITL---------VMVY
C14 NSTGTIVISPSVQTKIKKAYP-AFILGSSLTNTSAGL--PLYANYSLTII
C15 IDKSNVVRGW--------------IFGTTLDNTTQSA---------LLV-
C16 TEKSNVIRGW--------------VFGSTFDNTTQSA---------IIV-
C17 NKTGSVIVGTAQTTIKKIYPA--LMLGSSFGNFSVNNKSGAYFNHTLLIL
C18 NKTGSLVISPTTSKVIKKIYP-AFMLGTAVTSFAHGH-AGRYLNHTLVIL
: . : .
C1 ------------NNGSAITIEVC-YFQFCDNPAFIISGGAQTN-TAIYIN
C2 ------------NNSTNLIVRVC-NFELCKVPLFVVFKSNNSQLSHLFSD
C3 ------------NNSTNLIVRVC-NFELCKVPLFVVFKSNNSQLSHLFSD
C4 TLDKVVSFFVEGADAWDYASYRCANGYSCA--HQVVYTPVTLRITTVPEG
C5 TLDKVVSFFVEGADTWDYASYRCANGYSCA--HQVVYTPVTLRITTVPQG
C6 PGNLGSWPTVSKPTTIKVYIIVGSNATICAYPAFNRWGPAG---QFYADD
C7 GLNNTYRFYL--HNNWERATVRCHTKQSCA--FFPVENVTTLNITTNGEG
C8 G-SRSYRYYL--TNNWNRVDVKCVNYPTCI--INPVRNITTFNVTTNAQG
C9 GINGSYRYYI--PNDWFRVSVKCENKYVCA--IYPVYNQTTLNITTNAKG
C10 GISKSYRYFL--KNDWYRVTVKCLNKYACA--LYPVYNQTTLNITTNARG
C11 PDNLGSWNQVSYRNVTTVHLVVCSNATLCINPGFNRWGPAG---NIIASN
C12 AGNVGSWSSLVTQQQANITIVSCDNATLCANPFFLRWGPGVIR-SFTISN
C13 AGNIGSWTNTVTQTSANITIVSCDNATLCSNPLYLRWGPGGLP-GYVIKD
C14 PDGCGTVLHAFYCILQPRTQNRCPGNGGYK--AYFVYETIHNDCVPAINK
C15 ------------NNGSAITIEVC-YFQFCDNPAFIISGGAQTN-TAIYIN
C16 ------------NNSTHIIIRVC-YFNLCKDPMYTVSAGTQVS-SWVYQS
C17 PSKCGTVFQVAYCLLQPRTDSYCPGNANYV--SYALIDSPT-DCTSADES
C18 PESCGTSLTVFYCILEPRNGTRCPNHQDYT--SYVIWETPHLDCGSSVNR
C1 LRN--CTYVDTLRDLPL-SFAEVDGGFKHLREFVFKNSDGFLHIYGAYQ-
C2 SFN--CTFEYVSRAFSL-DIREQSGNFVDLREFVFRNRNGFLHIYEGYE-
C3 SFN--CTFEYVSRAFSL-DIREQSGNFVDLREFVFRNRNGFLHIYEGYE-
C4 IRS-YDLCTNCSGFPEH-VFAVLDGGEIPP-NFDFTN---WFYLTNASS-
C5 IRS-YDLCTNCSGFPEH-VFAVLDGGEIPP-NFDFTN---WFYLTNASS-
C6 AFV--NHGDSCFVNNTF-EIPLNTSRI----NLAFRFNDGNLLLYHSRW-
C7 LIESYDVCADCGGFPVH-VFPVLEHGYIPN-DFSFSN---WFMLSNTST-
C8 LFQSYTVCDDCNGFPQH-VFAVLDGGYIPS-EFGLDN---WYVLSNTST-
C9 LIKEYSVCESCNGFPAH-VFPVLEGGKIPA-DFDFTN---WFYLSNTST-
C10 LIQSYSVCDSCNGFPAH-VFPVLEGGKIPA-DFDFTN---WFYLTNSST-
C11 ALV--DHSNSCFVNNSF-NVSISTSRI----NLAFLFKDGDLLIYHSNW-
C12 AFQ--CHGNYTFYDTKLVNFTVSTARY----NLAFTFADGDIFMY--YA-
C13 AFH--CHGDYTFYDSKIINFSVDSSRY----NFAFSFADGDIFMY--YA-
C14 --N------ASLNSFKT-FFDLVNCTFFDSWDITADEVKEWFGITQDTQG
C15 LRN--CTYVDTLRDLPL-SFEDVDGGFKHLREFVFKNSDGFLHIYGAYQ-
C16 AFN--CTYDRVKKSFQL-DTSPKTGNFTDLREFVFKNRDGFFTVYQTYT-
C17 KRR------NGLEDIKK-YFNLVNCTYFEEFNVTADERAEWFGITQDSQG
C18 --N------ATLNSFKV-SFNLRQCKFMRTYNISDDENQEWFGITQNAQG
:. :
C1 --PHDLDIGAPAALPAQFLPLKPLWKLPLGLNITNYKVV----TTLKP--
C2 --AISIVRGLPAGFNV----LKPLLKIPFGLNVTSFKTF----LTVYR--
C3 --AISIVRGLPAGFNV----LKPLLKIPFGLNVTSFKTF----LTVYR--
C4 --PVSGRVVGVQPLQ-----LLCLWPIPALLGTATDITFDRNGTSDVRCN
C5 --PVSGRVVGVQPLQ-----LLCLWPIPALLGTATDITFDRNGTSDVRCN
C6 --LPTSGLNLLEDTP-----LHFYMSVGVGANLPNAQFF----QSLSR--
C7 --FLQGKLVSTQPLK-----LMCLWPVPSLLANDEKIFFN---ASGATCN
C8 --VLDGRVLTNQPLL-----VACLWPVPSLLSNDNPIHFNMSLNTGVNCN
C9 --LVAGRVVGIQPLR-----LLCLWPVPSTTANDDKIYFN---TTGANCN
C10 --LVAGRVVGIQPLK-----LLCLWPVPSITANDDKIYFN---TTGANCN
C11 --LPKGSFDFNQSFP-----LQYFMTLPVGGNLPRAQFF----QSIVRQG
C12 --ALGDSLNLPTAYP-----LQPYLRIPAGFKPDVVQFF----QAITRP-
C13 --PLGDSQNVAKAFP-----LQPYLRIPAGFKPKRAQFF----QAIIRK-
C14 VHLYSSRKGDLYGGN-----MFRFATLPV---YDAIKYY----TVIPR--
C15 --PYDLAIGATAALPAQFLPLKPLWKLPLGLNITNYKVV----TTLKP--
C16 --PVNLLRGLPSGLSV----LKPILKLPFGINITSFRVV----MAMFS--
C17 VHLYTSRKNGFNSNN-----LFLFASVPI---YDKINYY----TVIPR--
C18 VHLYSSRKGDLYGGN-----MFLFDTLPV---YETLKYY----TVIPR--
: :
C1 --------TNQAFQAAYIVGNLKHTTMMLSFNENG-----TMSNAID---
C2 ----VAAGSISVASSAYFVGYLKPLTFMLSYDLNG-----TINNAVD---
C3 ----VAAGSISVASSAYFVGYLKPLTFMLSYDLNG-----TINNAVD---
C4 GFSSNATADAMRFSLNFTENGVFAKEGVITLKTVSNTFKFSCSNSSTYTS
C5 GFSSNATADAMRFSLNFTENGVFAKEGVITLKTVSNTFKFSCSNSSTYTR
C6 SLDGSGDGKCFSAQNNLYIAPIVQRELLVAYSDAG-----IPTKVAD---
C7 GYQFDGVADAIRFSLNFSSDQVFNGVNNIVFDVEGGTFEFFCTNDTSVNP
C8 GYSEVREVSHLRFALNFTNQQVLNGVHNIDLLGDTFNFTFTCTNNSDITK
C9 GFVGEGVADALRFSLNFTSNQVLNGVHNIILESTSSKFTFTCRNDSESTF
C10 GFVGEGVADALRFSLNFTANQILNGVHNIILEGTEAKFTFTCRNDSESTL
C11 GTNNGADDRCVDFNISLHIAHLVNRDLLVSYFNNG-----SVANAAD---
C12 -NGESAEVACASSTVSWYVSRLYYKELLVGYDSYS-----SIVNVSF---
C13 -TAEDAEFQCSRYTTSWYVSYLKYHELLVGYDANS-----IISNVST---
C14 --SFRAKANRRESWAAFYVYKLHQLTYLLDFSVDG-----YIRRTID---
C15 --------TNQAFQAAYIVGNLKHTTMMLSFNENG-----TMSNAID---
C16 ----KTTSNYVPESAAYYVGNLKQSTFMLSFNQNG-----TIVDAVD---
C17 --SIITPANQRSAWAAFYVYPLHQLSYLLNFDVNG-----YITQAAD---
C18 --SLRSRLNERQAWAAFYVYSLHKLTYLLDFSVDG-----YVRRAID---
: :
C1 ----CSQDPLAELKCTLKQF---DVGKGIYQTSNFRVQPTVDVARFPNIT
C2 ----CSQDPLAELKCTIKNF---NVSKGIYQTSNFRVSPTREVVRFPNIT
C3 ----CSQDPLAELKCTIKNF---NVSKGIYQTSNFRVSPTREVVRFPNIT
C4 PY-VIPFGHIDQPYYCFTTFYINETTGTTATSFVGMLPPIVREFVITRLG
C5 PY-VIPFGHIDQPYYCFTTFFTNETTGATATSFVGMLPPIVREFVITRLG
C6 ----CSLNAGEELFCVTGTF---DPPTGVYPLSRYRAQLS-GSVHITQQL
C7 TYRYVPFGQLTEIYRCFVET---TAENGTHTTFVGILPPVVREIVVSRLG
C8 GERFVPFGFLDNVYRCFVYF---DVGNGTVNKFVGILPPVVKEIVISKFG
C9 YR--VPFGETGQVYYCFIFT---EAGNQSYNTFVGILPPVLKEIVISRYG
C10 FR--VPFGVTGQVYYCFVFT---ESRNQSYNTFVGILPPILKEIVISRYG
C11 ----CAESASEELYCVTGSF---QPPTGVYPLSRYRAQVD-GFVRVTQRG
C12 ----CSSDAESELQCLLGTF---APANGVYSLSNFRSSPT-DNVRITNSA
C13 ----CSFDAESELQCLLGTF---TPANGVYSLSNFRSSPV-DTVRITNSA
C14 ----CGHDDLSQLHCSYTSF---EVDTGVYSVSSYEASAT-GTFIEQPNA
C15 ----CSQDPLAELKCTLKQF---DVGKGIYQTSNFRVQPTVDVARFPNIT
C16 ----CSQDPLAELKCTTKSF---NVSKGIYQTSNFRVSPVTEVVRFPNIT
C17 ----CGYNDYTQLVCSYGDF---NMKSGVYSTSYYSAKPV-GAYYEAHVY
C18 ----CGYDDVAQLFCSYESF---DVDSGVYSVSSFEAQPR-GYFVEQPHS
. :
C1 NVC--PFDKVFNATRFPSVYAWERTKISD-----------------CVAD
C2 NRC--PFDSIFNASRFPSVYAWERTKISD-----------------CVAD
C3 NRC--PFDSIFNASRFPSVYAWERTKISD-----------------CVAD
C4 DVYLNGYRIFSVGEVVSVNFNISSTDHRDFWTVAFVKDAEVMLDIEDTYI
C5 DVYLNGYRIFSVGEVVSVNFNISSTDHRDFWTVAFVKNAEVMLDIEDTYI
C6 SHCALPYKDILDPPQ-PVV--WKRYTVAN-----------------CSFD
C7 AIYINGYRLISLPVIESIVFNVTSKVGSDFWTVAFAQDVEVLLELNATNI
C8 TVYINGVNMATLPPVNSVIFNVTSTVGSDFWTVGFTDLADVMIDINATRI
C9 SIYLNGVKLFSLPTLESVIFNVSSNVGSDFWTIAYAQDAQVMVDLNATSI
C10 SIYLNGVKLFSLPVLQSVIFNVSSKVGSDFWTVAYAQDAQVMVDLNATSI
C11 DYCQPPYADLLEPPQ-PVV--WRRFMLYN-----------------CAFD
C12 SSCSVPYSVLSRPPL-PFV--WKRYAISN-----------------CKFD
C13 KACSVPYNLLETPPL-PFV--WKRHSISN-----------------CKFD
C14 TEC--DFSPMLKGVA-PQVYNFKRLVFSN-----------------CNYN
C15 NVC--PFDKVFNATRFPSVYAWERTKISD-----------------CVAD
C16 NLC--PFDKVFNATRFPSVYAWERTKISD-----------------CVAD
C17 PDC--NFTDLFRENA-PTIMQYKRQVFTR-----------------CNYN
C18 SEC--DFSAMFSSQP-PQVYNFSRLVFTN-----------------CNYN
.
C1 YTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C2 YTVLYNSTSFSTFKCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C3 YTVLYNSTSFSTFKCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C4 KQLLYCNNPVNVVKCQQLK-FVLEDGFYSYVPASEDSLPRTIVRLPRFMT
C5 KQLLYCNNPVNVVKCQQLK-FVLEDGFYSYAPQSEDSLPRTIVRLPRFMT
C6 FDVIVNNLPTYELKCYGVAPTRLAQMCYSGVTLDVMRINST------HFT
C7 VDILYCESPINKLKCQQLT-FSLDDGFYPASSAYTEYTPRSYVALPYHAT
C8 VDLLYCDTPINKLKCQQLS-FSLDDGFYTTTNVYKQAVPRTYVALPYHAT
C9 TDLLYCDTPLNRLKCQQLS-YALEDGFYPTTNIYTKDIPRSYVALPYHAT
C10 TDLLYCDTPLNRLKCQQLS-YALEDGFYPTTNIYTRDIPRSYVALPYHAT
C11 FSVVIDNLPTHQLQCYGISPKRLASMCYSSVTIDVMRINAT------HLN
C12 FQALLSHLPTFQLRCFGISPTKLATMCFGTVTLDIMLVNVT------HYN
C13 FQALLSHLPSFQLRCYGISPTKLSSMCFGTVSLDVMLVNVT------HYN
C14 LTKLLSLFAVDEFSCNGISPDAIARGCYSTLTVDYFAYPLS------MKS
C15 YTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C16 YTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRFS------EVR
C17 LTLLLSLVQVDEFVCDKITPEALATGCYSSLTVDWFAFPYA------WKS
C18 LTRLLSLFQVSEFSCHQVSPSALASGCYSSLTVDYFAYPLS------MAS
. . * : : : :
C1 QVAPGQTGVIADY-----------------------NYKLPDD---FIG-
C2 QVAPGETGVIADY-----------------------NYRLPDD---FTG-
C3 QVAPGETGVIADY-----------------------NYRLPDD---FTG-
C4 HNFINVSVVVSFYFDDGKHDTPVGSDFYECATCAPKYYHVRFTDYWLDG-
C5 HQHINISVVVSFYFDDGQADTPVGSDFYACATCAPKYYKMVFADVDWTGI
C6 NMLGNVPDVFSMY-----------------------NYVLPTD---FYG-
C7 HTEVVLGVHLSLY-----------------------TKHSATL---NGG-
C8 HSAINITAEVSVN-----------------------SNDDRFL---INGL
C9 HAVLNITAYIGD------------------------KKDDRIQ---INGF
C10 HMVLNITAYIGD------------------------KKDDRIQ---INGF
C11 NLLNRVPDSFSLY-----------------------NYAVPDN---FYG-
C12 NLLNDVPDDFSLY-----------------------NYQLPRN---FYG-
C13 NLLNDVPDDFSLY-----------------------NYQLPRN---FYG-
C14 YIRPGSAGNIPLY-----------------------NYKQSFA---NPT-
C15 QVAPGQTGVIADY-----------------------NYKLPDD---FIG-
C16 QVAPGQTGVIADY-----------------------NYKLPDD---FTG-
C17 YLAIGSADRIVRF-----------------------NYNQDYS---NPS-
C18 YLRQGSTGPIAQF-----------------------NYKQDFT---NPT-
.
C1 ----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFE
C2 ----------CVIAWNTANQ------DVGSYFYRSHRSTKLK-----PFE
C3 ----------CVIAWNTANQ------DVGSYFYRSHRSTKLK-----PFE
C4 ----SNHTNVCVNTASFTTRLFTDYFGT-SGAVRIEIEPGTC-----PFG
C5 HGDILNVTGVCVNAASFTTKFRSSYLGADGVYVG--LEAGSC-----PFS
C6 ----------CVHAYYINST-NKRYTVAYQRGYSKVITPGGR-----QPY
C7 ------NDTICVNTTQFTTVLNAS---VYTG-ARGDVVNVNC-----PFT
C8 ------NGTFCVNTTQFTV--ITHFTQYTG--MRVAIENLDC-----PFT
C9 ------NDSFCVNTTQFTTN----FVQTDSGIIKAELKNGDC-----PFT
C10 ------NDSFCVNTTQFTTN----FVQTDSGIIKAELKNGDC-----PFT
C11 ----------CLHAFYLNST-T-----AYAVANRFPIKPGGR-----QSN
C12 ----------CLHSYYLPND-T-----AFSYTVASRIRYPSW-----VHS
C13 ----------CLHSYYLPNS-T-----TFNYIVASRSQSPSW-----VYN
C14 ----------CRVMASVPANVTITKPEAYGYISKCSRLTGDYQHIETPLY
C15 ----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFE
C16 ----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFE
C17 ----------CRIHSKVNSSVGISYSGLYSYITNCNYGGFNKDDVVKPGG
C18 ----------CRILAAVPSNVTIPLPQSYMWLTQCYTNSPSN-----SHY
*
C1 RDLSSEENGVLTLST----YDFNQNVPL---------E-YQATRVV----
C2 RDLSSDENGVRTLST----YDFNPYVPL---------D-YQATRVV----
C3 RDLSSDENGVRTLST----YDFNPYVPL---------D-YQATRVV----
C4 FD---TLNNYLAFGS----LCFSTV-P----------NGGCTMNIVTQGP
C5 FD---TLNNYLTFGS----LCFSTV-P----------NGGCTMNVVSKGP
C6 ND---YVRTLLNTPNE---IC------T---------R-ANCFGLV----
C7 WA---SLNDYLSFGT----ICFSFE-PL---------PGGCTMSIN-VVN
C8 LD---SLNNFLSFGS----ICFSTY-AV---------GGGCRMRLD-KVL
C9 FD---SINNYLTFDS----ICFSIE-PI---------GGGCTMNIV-RTW
C10 FD---SINNYLTFDS----ICFSIE-PI---------GGGCTMNIV-RTW
C11 RD---YIATVLNAAH----YT------T---------F-SYIFGLA----
C12 ITPGGRQPVGPFLDS----LQSSSK-PC---------T-GSCLGLA----
C13 ISPGGRQPPSSFLNT----LPGSAK-PC---------Q-GSCLGLA----
C14 INPG-EYSICRDFAP----WGFSEDGQVFKRTLTQFEGGGLLVGVGTRVP
C15 RDLSSEENGVLTLST----YDFNQNVPL---------E-YQATRVV----
C16 RDLSSEENGVRTLST----YDFNQYVPL---------E-YQATRVV----
C17 RASQPCVTGALNSPTNGQVWSFNFGGVP-----------YRTSRLTYTDH
C18 VEAG-SYTPCLGLAS----RGFNTFNSM---------HYDPATGLTATGS
:
C1 -------------VLSFELLNAPATVC---------GPKLSTPLVK--NQ
C2 -------------VLSFELLNAPATVC---------GPKLSTELVK--NQ
C3 -------------VLSFELLNAPATVC---------GPKLSTELVK--NQ
C4 YGQ----PHTFA-VLYVSYTDGDNIIGVPPSNIPAYGVADMSQVYL--DT
C5 YGE----PHTFA-VLYVSYTDGDNVIGVPPYNIPPYGVSDMSIVYF--DV
C6 -------------VISLNPASGSHLVC---------PTNNDTDVVE--NQ
C7 LGY----YTPFA-TLYVGYTRGHGITG---VSQKVGGIFDPSFITL--DT
C8 IST----PTPWR-ILNIVYTDGDRTTG---VTKASGGIFDPSELYV--GV
C9 FGQ----SVPWR-TLYVSYTKGSRITG---VKTPNTGVFDPSTFVE--DV
C10 FGQ----SVPWR-TLYVSYTKGSRITG---VKTPNTGVFDPSTFVE--DV
C11 -------------VITLKPASGNKLVC---------PIANDTDIIT--ER
C12 -------------VISLSIASANKLVC---------PVGNDTDIVP--DT
C13 -------------VISLSVASANKLVC---------PVGNDTDIVT--GN
C14 MTA----NLEMGFVISVQYGTDTNSVC------PMLDLGESSTITNRLGK
C15 -------------VLSFELLNAPATVC---------GPKLSTPLVK--NQ
C16 -------------VLSFELLNAPATVC---------GPKLSTSLVK--NQ
C17 LKN----PLDMVYVITVKYEPGAETVC-----PKQVRPDYSTNITGLLGS
C18 YQYISEEALEMAFIISVQYGTDSNSVC------PLQAVHNDTKVDDKLGR
: . : .
C1 CVNFNFNGLKGTGVLTD-SSKTFQSFQQFGRDASDFTDSVRDPQTLQILD
C2 CVNFNFNGLKGTGVLSS-SSKRFQSFQQFGRDASDFTDSVRDPQTLEILD
C3 CVNFNFNGLKGTGVLSS-SSKRFQSFQQFGRDASDFTDSVRDPQTLEILD
C4 CTTYTIYGMTGRGIITR-SNNTFITG-LYYTSNAGNLLAYKNSTTGIVYN
C5 CTTYTIYGMTGRGIITP-SNNTFITG-LYYTSLAGDLLAYKNSTNGIVYN
C6 CVKYNFYGYSGNGVLTK-SNLTIPDNKLFVASNTGSIIAVK--AQDTVYS
C7 CTEYTVYGITGKGVITS-LNKTIVAG-LYYTSTSGQLLGFKNSTTGEVFA
C8 CTDYTIYGISGRGIINQ-LNTTIIAG-LYYTSPAGQLLGFKNATTGDIYG
C9 CTDYTIYGMSGRGVISR-SNASYIAG-LYYTAISGQLLGFKNATTGETFV
C10 CTDYTIYGMSGRGVISR-SNASYIAG-LYYTAISGQLLGFKNATTGETFV
C11 CVQYSLYGYTGTGVLSKNTSLTVPNGKVFTASSTGAIIGVF--INGTMYS
C12 CVNYNIYGYQGTGVISR-SNYTLPSSKVFSLSSSGELTVFA--VGSSFYQ
C13 CVNYNIYGYQGTGVITT-SNYTLPSTKVFSLSASGELTVFS--VGSSFYQ
C14 CVDYSLYGVTGRGVFQN-CSAVGVKQQRFVYDSFDNLVGYY-SDDGNYYC
C15 CVNFNFNGLKGTGVLTD-SSKTFQSFQQFGRDASDFTDSVRDPQTLQILD
C16 CVNFNFNGFKGTGVLTD-SSKTFQSFQQFGRDASDFTDSVRDPQTLRILD
C17 CISYDIYGITGTGVFQL-CNATGIPQQKFVYDKFDNIIGFH-SDDGNYYC
C18 CIEYSLYGVTGRGVFQN-CTPVGLKQQRFVYDGFDNLVGYH-SDNGNYYC
* : . * * *:: . : .
C1 ISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTIHADHLTHSWRVY
C2 ITPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVPTAIRADQLTPAWRVY
C3 ITPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVPTAIRADQLTPAWRVY
C4 IYPCQLAGQVAVI--SDN------IVGMASSTPNVSLDFNVTVVADSFYY
C5 VYPCQLSGQVAVI--SDN------IVGMASSTPNVSLDFNVTVVADSFYY
C6 ISPCVSVPVSVGY--DPNYEQ-ALLFNGLECNQRAVAVSIPASAY-WLRT
C7 VRPCDLASQVAVY--QND------IIGAMTASRNSSFGFANVSELSNFYY
C8 VRPCALSSQAAVY--QNE------IIGVMTASANESFGFQNVTETPKFFY
C9 VVPCDLSSQAAVI--GDK------VVGVMTSITNSSFEFVKSIETPNFYY
C10 VVPCDLSSQAAVI--GDK------VVGVMTSITNSSFEFVKSIETPNFYY
C11 ITPCVTVPVSVGY--HANFER-VLLFNGLSCSQRSRAVSRPASTL-WNFS
C12 LSPCAFAPISAAF--YKGYTT-SLLFNNLPCSNRHRAVVEPVSAY-WRRS
C13 LSPCAFAPISAAF--YKGYTT-SLLFNNLPCSGRSRAVVEPVSDY-WRAS
C14 VRPCVSVPVSVIY--DKDTNLHATLFGSVACEHVTTMMSQFSRLTQSNLR
C15 ISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTIHADHLTHSWRVY
C16 ISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTLHADQLAPSWRVY
C17 VAPCVSVPVSVIY--DDNTNQYATLFGSVACQHISTMAAQFSRETRASLV
C18 VRPCVSVPVSVIY--DKATNNHATLFGSVACEHVDTMMSQFSRMTQSRLR
: ** . : .
C1 TTGPHV---FQTQAGCLIGAEHVN--VSYQCDIPI----GAGICASYHTA
C2 STGVNV---FQTQAGCLIGAEHVN--ASYECDIPI----GAGICASYHTA
C3 STGVNV---FQTQAGCLIGAEHVN--ASYECDIPI----GAGICASYHTA
C4 LSNSAE-----------------------PCDQPVLTYAGIGICADGSIT
C5 LSNSAE-----------------------PCDQPVLTYAGIGICADGSIT
C6 VSDNQTAGVFDTPSGCVYNVINRTDITVNACDMPI----GNSLCLINATS
C7 HSNGHL-----------------------GCEEPVLIYGKMGICSDGSLT
C8 HSNGNS-----------------------TCTEPVLTYGSVGVCPDGTLI
C9 LTNATA-----------------------NCTSPVITYGKLGVCEDGSIA
C10 LTNATA-----------------------NCTSPVITYGKLGVCEDGSIA
C11 VSDESA---IDTLSGCVVNAILHNDTTVSTCSMPL----GNSLCLINDTT
C12 VADNNT---FDTTAGCIFNAYNLTSIVVNQCDLPI----GDSYCLQPSLI
C13 VVNNST---FDTSAGCIFNAINSTSIVVNQCDLPI----GDSYCLQPSTI
C14 RRDSNA--PLQTAVGCVVGLSNNSL-VVSDCRLPL----GQSLCAVPPVT
C15 TTGPYV---FQTQAGCLIGAEHVN--ASYQCDIPI----GAGICASYHTA
C16 TTGPYV---FQTQAGCLIGAEHVN--ASYQCDIPI----GAGICASYHTA
C17 SRNMQN--LLQTSVGCVMGFHETND-TVEDCNLSL----GQSLCAIPPNT
C18 VRNIDDAGPMQTSVGCVVGLVNTSL-IVDNCQLPL----GQSLCAVPATT
. * .: . *
C1 SLLRSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTT
C2 STLRSVGQ------KSIVAYTMSLGAENSIAYANNS-IAIPTNFSISVTT
C3 STLRSVGQ------KSIVAYTMSLGAENSIAYANNS-IAIPTNFSISVTT
C4 NNTARRAA-----------------SDPISPVISGN-ISVPTNFTFSVQV
C5 NNTARRAA-----------------SDPISPVISGN-ISVPTNFTFSVQV
C6 TQARATSGDDTKSYLSLVNYDPTY-TSLTKVLTPVYWVSIPTNFTLAAGT
C7 EVNNKDAE-----------------QQPVSPIATAN-VTVPVNFTVSVQV
C8 MVQTRSGN-----------------VNPVSPIVSGN-ITIPLNFTVSVQV
C9 EVKVNTHV-----------------QTPVSPISTGN-ITVPSNFTVSVQV
C10 EVKVNTHV-----------------QTPVSPISTGN-ITVPSNFTVSVQV
C11 VAIAHAVG---LPKLYLVNYDPLYDNNSATPITPVYWVKIPTNFTLTATD
C12 KGFEATLS--------LVTYNPL--ADSLTPITPVYQVSVPTNFTLVAST
C13 SRQGSTLL--------LVTYDPL--SDTLTPITPVYEISVPTNFTLVAST
C14 SFRRRSAS---EFQLAVLNYTSPIVVTPIN--SSGFTAAIPTNFSFSVTQ
C15 SLLRSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTT
C16 SLLWSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTT
C17 NLRVGRST----FGLGSLAYNSPLRVDALN--SSEFKVSLPLNFTFGVTQ
C18 IRAATGTT--SSLQLATINFTEPHMLTPIN--SSRFIVEIPTNFSFGVTQ
:* **:. .
C1 EVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQ
C2 EVMPVSMAKTSVDCTMYICGDSQECSNLLLQYGSFCTQLNRALTGVALEQ
C3 EVMPVSMAKTSVDCTMYICGDSQECSNLLLQYGSFCTQLNRALTGVALEQ
C4 EYIQLMLKPVTVDCSVYVCNGNPRCLQLLAQYASACRTIEQALQ-LSARL
C5 EYIQLMLKPVTVDCSVYVCNGNPRCLQLLAQYASACRTIEQALQ-LSARL
C6 EYIQTTSPKINIDCAKYLCGDSDKCLTVLLQYGTFCDDVNKALAEVSSVI
C7 EYLQMYMQPVSVDCNTYVCSGNVHCLRLLTQYASACRNIESSLQ-LSARL
C8 EYLQMYLQPVSVDCNMYVCGGNPHCLRLMSQYASACRTIEESLQ-LGARL
C9 EYLQMYMRPVSVDCAMYVCNGNPHCLRLLTQYASACRTIEDALQ-LSARL
C10 EYLQMYMRPVSVDCAMYVCNGNPHCLRLLTQYASACRTIEDALQ-LSARL
C11 EFIQTNAPKVTIDCARYLCGDSSRCLNILLHYGTFCDDINKALAKVNTIL
C12 EYIQTYASKISIDCAKYLCGDSSQCRTVLLQYGTFCNDVNVALTRVFTLL
C13 EYIQTYASKISIDCAKYLCGDSSQCRTVLLQYGTFCNDVNVALTRVFTLL
C14 EYVETSIQKVTVDCKQYVCNGFSRCEKLLVEYGQFCSKINQALHGANLRQ
C15 EVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQ
C16 EVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQ
C17 EYIETSIQKITVDCKQYVCNGFAKCEKLLEQYGQFCSKINQALHGANLRQ
C18 EFIQTTIQKVTVDCKQYVCNGFEKCEQLLREYGQFCAKINQALHGANLRQ
* : .:** *:*.. .* :: .*. * :: :*
C1 DKNTQEVFAQVKQMYKTP-TIRDFGG-FNFSQIL----PDPLKPTKRSFI
C2 DKNTQEVFAQVKQMYKTP-AIKDFGG-FNFSQIL----PDPSKPTKRSFI
C3 DKNTQEVFAQVKQMYKTP-AIKDFGG-FNFSQIL----PDPSKPTKRSFI
C4 ESVEVNSMISISQQALDLGVIDNFNHDFNLTNVL------PASVGGRSAV
C5 ESVEVNSMISISQQALDLGVIDNFNHDFNLTNVL------PANVGGRSAV
C6 DSTMVSLVSELTADVVRS-ENTAFDTTYNFTSLMGCLGSSCNTRNYRSAL
C7 ESLEVNSAITVSERAASLANITNFEN-YNLSVLL------P-NLNGRSAM
C8 ESTEVANTISVSSQAVQLANITNFDS-YNVSVLL------P-RANGRSFI
C9 ESIEVNSVISVSEDALELANISNFDH-YNMSALL------P-KKNGRSFI
C10 ESIEVNSVISVSEDALELANISNFDH-YNMSALL------P-KKNGRSFI
C11 DSALLSLSKELSINTRDEIQSFAFGGDYNFTGLMGCLGPNCGATTYRSAL
C12 DNSLVDTFSSLKSTAPVQ---LAYTGDFNFTSLVGCIGTDCDSKSHRSAL
C13 DNSLVDTFSSLKSTAPAQ---LAYTGDFNFTSLVGCVGTDCDSKSYRSAL
C14 DESVYSLYSNIKTTSTQT-LEYGLNGDFNLT-LLQVPQIGGSSSGYRSAI
C15 DKNTQEVFAQVKQMYKTP-TIRDFGG-FNFSQIL----PDPLKPTKRSFI
C16 DKNTQEVFAQVKQMYKTP-TIRDFGG-FNFSQIL----PDPLKPTKRSFI
C17 DDFVRNLFESVKTPQTVP-LTTGFGGEFNLT-LLEPLSVSTGSSNARSAL
C18 DESVSNLFSNIKTQATQP-LDAGLTGDFNLT-LLQVPKVVTSQYSYRSAI
:. :. :*.: :: ** :
C1 EDLLYNKVTLADAGFMKQ-YADCL---GGINARDLICAQKFNGLTVLPPL
C2 EDLLFNKVTLADAGFMKQ-YGECL---GDISARDLICAQKFNGLTVLPPL
C3 EDLLFNKVTLADAGFMKQ-YGECL---GDISARDLICAQKFNGLTVLPPL
C4 EDLLFDKVVTSGLGTVDADYKECAS-RTANTVAEVGCVQYYNGIMVLPGV
C5 EDLLFDKVVTSGLGTVDADYKECAS-RTANWVAEVGCVQYYNGIMVLPGV
C6 SDLLYNKVKVADPGFMSS-YQKCIDSQWGGSVRDLICTQNFNGISVLPPI
C7 EDLLFNKVVTNGLGTVDQDYKQCIKDKGVGDVADVACAQYYNGVMVLPGV
C8 EDLLFDKVVTSGLGTVDQDYKQCVNEWGIGEVADLSCAQYYNGIMVLPGV
C9 EDLLFNKVVTNGLGTVDQDYKKCMKDKGFGEASDIACVQYYNGIMVLPGV
C10 EDLLFNKVVTNGLGTVDQDYKKCMKDKGFGEASDIACVQYYNGIMVLPGV
C11 SDLLYDKVKITDPGFMQS-YQKCIDSQWGGSVRDLLCTQTYNGIAVLPPI
C12 SDLLFSKVSVADPGFMQS-YQQCLDAQWGGNIRDLLCTQTFNGISVLPPI
C13 SDLLFNKVSVADPGFMQS-YQKCLDSQWGGNIRDLLCTQTFNGISVLPPI
C14 EDLLFDKVTIADPGYMQG-YDDCMK-QGPQSARDLICAQYVSGYKVLPPL
C15 EDLLYNKVTLADAGFMKQ-YADCL---GGINARDLICAQKFNGLTVLPPL
C16 EDLLYNKVTLADAGFMKQ-YADCL---GGINARDLICAQKFNGLTVLPPL
C17 EELLFDKVTIADPGYMQG-YDDCMQ-QGPASARDLICAQYVAGYKVLPPL
C18 EDLLFNKVTIADPGYMQG-YDECMK-QGPPSARDLICAQFVAGYKVLPPL
.:**:.** . * :. * .* :: *.* * *** :
C1 LTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C2 LTDEMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C3 LTDEMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C4 VDQSLLAQYSAALTGAMVLGGITAAAA----VPFSIAVQSRLNYLALQTD
C5 VDQSLLAQYSAALTGAMVLGGITAAAA----VPFSIAVQSRLNYLALQTD
C6 VSPAMQSLYTSLLVGAVASAGYTFGITSVGVIPFATQLQFRLNGLGVTTQ
C7 VDDTKMSLYTASLVGGMVLAGFTAGAA----IPFSLAVQARLNYVALQTD
C8 VDANMMTLYTASLTGAMVFGGITASAS----IPFSLAVQSRLNYVALQTD
C9 VDDSKMALYTAALTGGMLLAAFTAGAS----IPFSLAVQSRLNYVALQTD
C10 VDDSKMALYTAALTGGMLLAAFTAGAS----IPFSLAVQSRLNYVALQTD
C11 VSPAMQALYTSLLVGAVASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQ
C12 VSPSMQALYTTALVGGIAASGFTFGVSSAAVIPFATQLQFRLNGLGVTTN
C13 VSPSMQALYTTALVGGIAASGFTFGVSSAAVIPFATQLQFRLNGLGVTTN
C14 YDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQ
C15 LTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C16 LTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
C17 MDVNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSIFYRLNGVGITQQ
C18 YDPNMESMYTTSLTGAILGAAWTAGASSFAAIPFAQSVFYRMNGIGITQQ
: *:: * .. .. * . :**: : *:* :.: :
C1 VLYENQKQIANQFNKAITQIQESLT--------------TTATALGKLQD
C2 VLYENQKQIANQFNKAISQIQESLT--------------TTSTALGKLQD
C3 VLYENQKQIANQFNKAISQIQESLT--------------TTSTALGKLQD
C4 VLQRNQQQLANSFNAAMGNITEAFGRVNDAIEQTSHAISTVAQALDKVQN
C5 VLQRNQQQLANSFNAAMGNITDAFGRVNDAIEQTSHAVSTVAQALNKVQT
C6 VLVQNQQLIANSFNNALTNIQKGFD--------------ATNLALSQMQS
C7 VLQRNQQILAESFNSALSNITEAFTEVNEAIKNTADAINTVATALGKVQS
C8 VLNRNQEILAQSFNSALGNITAAFSEVNHAFQETSDAINTVAQALGKVQT
C9 VLQKNQQILATSFNNAMSNITVAFTEVNQAIKETSDAINTVAKALGKVQS
C10 VLQKNQQILATSFNNAMSNITVAFTEVNQAIKETSDAINTVAKALGKVQS
C11 VLVENQKLIASSFNNALVNIQKGFT--------------ETSIALSKMQD
C12 VLMENQQLIANAFNKALVSIQEGFT--------------ATNQALNKIQT
C13 VLMENQQLIANAFNKALVSIQEGFT--------------ATNQALNKIQT
C14 VLSENQKLIANKFNQALGAMQTGFT--------------TSNQAFSKVQD
C15 VLYENQKQIANQFNKAITQIQESLT--------------TTATALGKLQD
C16 VLYENQKQIANQFNKAITQIQESLT--------------TTSTALGKLQD
C17 VLSENQKIIANKFNQALGAMQTGFT--------------TTNEAFQKVQD
C18 VLSENQKQIANKFNQALGAMQTGFT--------------TTNLAFAKVQE
** .**: :* ** *: : .: *: ::*
C1 VVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGR
C2 VVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGR
C3 VVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGR
C4 VVNDQGMALSQLTKQLASNFQAISSSIEDLYNRLDRVEADQQVDRLITGR
C5 VVNDQGMALSQLTKQLASNFQAISSSIEDLYNRLDRVEADQQVDRLITGR
C6 VINQHAQQLQTLVNQLGNSFGAISSSINEIFSRLDGLEANAQVDRIINGR
C7 VVNQQGEALAQLTKQLSSNFQAISSSIEDIYLRLDKLAADAQVDRLISGR
C8 VVNEQGQALSQLTRQLASNFQAISNSIEDIYNRLDGLTADAQVDRLITGR
C9 VVNEQGQALSQLTRQLASNFQAISSSIEDIYNRLDSLAADAQVDRLITGR
C10 VVNEQGQALSQLTRQLASNFQAISSSIEDIYNRLDSLAADAQVDRLITGR
C11 VINQHAAQLQTLVTQLGNSFGAISSSINEIFSRLEGLAANAEVDRLINGR
C12 VVNNNALQLQVLVQQLGNTFGAISASVNEIFSRLDLLEANAEVDRLISGR
C13 VVNNNALQLQVLVQQLGNTFGAISASVNEIFSRLDLLEANAEVDRLISGR
C14 AVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGR
C15 VVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGR
C16 VVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGR
C17 AVNTNAQALAKLASELSNTFGAISSSIGDIIQRLDVLEQEVQIDRLINGR
C18 AVNANAQALSKLASELSNTFGAISSSISDILKRLDAVEQEAQIDRLINGR
.:* :. * *. :*...* *** : :: **: : : ::**:*.**
C1 LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLM
C2 LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGRGYHLM
C3 LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGRGYHLM
C4 LAALNAFVAQQLTKYTDVRASRQLAQEKINECVKSQSFRYGFCGNGTHVF
C5 LAALNAFVAQQLTKYTDVRASRQLAQEKINECVKSQSFRYGFCGNGTHVF
C6 TVVLNTYVTQLLLKASEVRSQAALARQKISECVKAQSLRNDFCGNGTHVF
C7 LAGLNAFVTQTLTKYTEVRASRQLALQKVNECVKSQSSRYGFCGNGTHLF
C8 IGALNAFVAQTLTKYTEVRASRQLAIQKINECVKSQSARFGFCGNGTHLF
C9 LGALNAFVTQTLTRYTDARASRQLAIQKINECVKSQSMRYGFCGNGTHLF
C10 LGALNAFVTQTLTRYTDARASRQLAIQKINECVKSQSMRYGFCGNGTHLF
C11 MMVLNTYVTQLLLQASEAKAQNALAVQKISECVKAQSLRNDFCGNGTHVL
C12 MVVLNTYVTQLLIQASELRSQAELAKQKMSECVKSQSLRNDFCGNGTHVL
C13 MVVLNTYVTQLLIQASELRSQAELAKQKMSECVKAQSTRNDFCGNGTHVF
C14 LTSLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIV
C15 LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLM
C16 LQSLQTYVTQQLIRAAEIRTSANLAATKMSECVLGQSKRVDFCGKGYHLM
C17 LTTLNAFVAQQLVRSESAARSAQLAKDKVNECVKSQSTRSGFCGQGTHIV
C18 LTSLNAFVAQQLVRSETAARSSQLAVDKVNECVKSQSKRNGFCGSGNHIV
*:::*:* * : . ** *:.*** .** * .*** * *:.
C1 SFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHEGK---AYFPREGVFVS
C2 SFPQAAPHGVVFLHVTYVPSQEKNFTTAPAICHEGK---AYFPREGVFVS
C3 SFPQAAPHGVVFLHVTYVPSQEKNFTTAPAICHEGK---AYFPREGVFVS
C4 SVVNAAPDGMMFFHSVLLPTAYMEVAAFSGLCVEGK-GFVLREVGNVLFE
C5 SVVNAAPDGMMFFHSVLLPTAYMEVAAFSGLCVEGK-GFVLREVGNVLFE
C6 SVPQLAPNGVMFIHYTYQPTAYALVQTAAGLCYNGT---GYAPLSGMFVL
C7 SVVNAAPNGIMFFHTVLIPSSYTTVQAWAGVCVNGDVGLILRDVRNTLFY
C8 SIANAAPNGIMLFHTVLLPSEYTTVQAWAGICIDNNVGLILRDFKTTLFF
C9 SIANAAPNGVMLFHTVLIPTEFVTVEAWSGVCVDGTHGLILRDVRTTLFQ
C10 SIANAAPNGVMLFHTVLIPTEFVTVEAWSGVCVDGTHGLILRDVRTTLFQ
C11 SIPQLAPNGVLFIHYAYTPTDYALVQTSAGLCYNGT---GYAPLRGMFVL
C12 SIPQLAPNGMLFIHYSYQPTKYAQVYTTAGLCFNGT---GFVPRDGLFVR
C13 TIPQLAPNGMLFIHYSYQPTNYVQVYTTAGLCFNGT---GFVPRDGLFVR
C14 SFVANAPNGFYFFHVGYVPTNFTNVTAAYGLCNNNNPLLCIAPIDGYFIT
C15 SFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHEGK---AYFPREGVFVS
C16 SFPQSAPHGVVFLHVTYVPSQERNFTTAPAICHEGK---AYFPREGVFVS
C17 SFVINAPNGLYFMHVGYHPSQHIEVVAAYGLCDAANPTNCIAPVNGYFIK
C18 SFVSNAPNGLYFFHVGYVPTAHINATAAYGLCNTELPPRCIAPIDGYFVT
:. **.*. ::* *: : .:* :.
C1 NGS-------SWFITQRNFYSPQIITTDNTFVAGSCDVVIGIINNTVYDP
C2 NGT-------SWFITQRNFYSPQIITTDNTFVAGNCDVVIGIINNTVYDP
C3 NGT-------SWFITQRNFYSPQIITTDNTFVAGNCDVVIGIINNTVYDP
C4 KDG-------RYFITARRMFEPRIPQTADFVQISGCDVVYLNVTRDELPT
C5 KDG-------SYLITARKMFEPRVPQTADFVQISGCDVVYLNVTRDELPT
C6 PND-TN----LWHYTKMNFYNPVNITFENTQVLDSCAVNYSYVNYSVIEP
C7 LDS-------KYYITTRDMYQPRTPVQSDFVRISNCSVSYVNITSEQLGD
C8 SD--------KYYVTPRDMFEPRTPVQADFVRIANCSVNYLNISSSELGT
C9 QGS-------TYYVTTRDMFEPRTPVAADFVRIANCSVTYVNITADSLGE
C10 QGS-------TYYVTTRDMFEPRTPVAADFVRIANCSVTYVNITADSLGE
C11 PNN-TN----MWHFTSMQFYNPVNISYSNTQILTSCSINYTSVNYSVLQP
C12 ENNESQ----VWYFTKASFYNPVNLSYENTHLLDTCGVNYTTVNNSVLNP
C13 ENNASQ----LWYFTKASFYNPVNLSYENTRLLDTCGVNYTTVNNTVLNP
C14 NQTTTYSIDTEWYYTGSSFFKPEPITQVNSRYVSS-DVKFEKLENNLPPP
C15 NGS-------SWFITQRNFYSPQIITTDNTFVAGSCDVVIGIINNTVYDP
C16 NGS-------SWFITQRNFYSPQIITTDNTFVAGSCDVVIGIINNTVYDP
C17 NQT-TRGVD-DWSYTGSSFYAPEPITTLNTRYVAP-QVTFQNISTNLPPP
C18 NSSATRDADPEWYYTGSAFYNPEPITLANTRYVSK-DTKYQELNNKLPPP
: * :: * : :
C1 LQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVDIQKEID----
C2 LQPEL--DSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEID----
C3 LQPEL--DSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEID----
C4 IIPDY--VDVNGTVEDILSKLPNRTSPELDLDIFNATYLNLTSEIADLTA
C5 IIPDY--VDVNGTVEDILSKLPNRTSPEFNLDIFNATYLNLTSEIADLTA
C6 TPPSS--YNFTEEFNKWYKNHSSYFNNTFNPGDFNFTGVNISEQLA----
C7 IIPDY--LDVNKTLNDLQQSRPNYTVPDLGLDQYNTTILNLTSEIAMLQN
C8 IIPDY--IDVNKTLEELEQQRPNYTLPELDIDRFNNTYLNLSAEIAELQR
C9 IIPDY--IDVNKTLEEL--GRPNFTLPDFNLDQFNNTYLNLSAEIALLNA
C10 IIPDY--IDVNKTLEEL--GRPNFTLPDFNLDQFNNTYLNLSAEIALLNA
C11 SAPSD--YDFQKEFDKFYKNLSTSFNNTFNPNDFNFSMVDVTAQIS----
C12 IEPPN--YNFQEEFDKYFKNQSSQFNITFDSSQFNVSIVNLNEQMA----
C13 IEPPN--YDFQEEFDKYFKNQSSHFNITFDSSQFNVSIVNLNEQMA----
C14 LLENSTDVDFKDELEEFFKNVTSHGPNFAEISKINTTLLDLSDEMA----
C15 LQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVDIQKEID----
C16 LQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVDIQKEID----
C17 LLGNSTGTDFKDELDEFFKNVSTSIPNFGALTQINTTLLDLSDEML----
C18 LLSNQTDESFRDELEEFFKNVSSQGPNFQEISKINATLLDLSDEMK----
.. .:. .. * : ::: ::
C1 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C2 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C3 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C4 RSESLKNTTLELKELIANINATLVDLEWLNRVETYIKWPWWVWLIIVLVL
C5 RSESLKNTTLELKELIANINATLVDLEWLNRVETYIKWPWWVWLIIVLVL
C6 ----------TLTDVVNQLNKSFIDLKQMNVYEQTIKWPWYVWLAMIAGL
C7 KSDSLIESTVKLHKLIEQLNQTYVDLEWLNRLESYVKWPWWVWLAILLAL
C8 KSESLQNSTIQLQELIERINSSYVDLELLKRIETYVKWPWYVWLAIILVM
C9 KSESLYNTTQRLEKSIENINNSYIDLELLNRLESYVKWPWYVWLAIFLAL
C10 KSESLYNTTQRLEKLIENINNSYIDLELLNRLESYVKWPWYVWLAIFLAL
C11 ----------SLHQVVDQLNQSFIDLKKLNVYEKTIKWPWYIWLAMIAGI
C12 ----------ALDSVVKSLNESFIDLKKLGVYTQQPNTPWYAWLGMIAGL
C13 ----------ALDSVVKSLNESFIDLKKLGVYTQTIKWPWYAWLGMIAGL
C14 ----------ILQEVVKQLNDSYIDLKELGNYTYYNKWPWYIWLGFIAGL
C15 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C16 ----------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
C17 ----------ALQQVVKALNESYIDLKELGNYTYYNKWPWYIWLGFIAGL
C18 ----------VLNEVVKQLNESYIDLKELGNYTYYQKWPWYVWLGFIAGL
* . :* : :**: : : **: ** :. :
C1 VGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLH
C2 IAIVMATILLCCMTSCCSCLKGAC-SCGSCC-KFDE-DDSEPVLKGVKLH
C3 IAIVMATILLCCMTSCCSCLKGAC-SCGSCC-KFDE-DDSEPVLKGVKLH
C4 ILFTCLMLFCCCSTGCCGIFSCLASSCGACCDIRGTKLQRYEAIE--KVH
C5 ILFTCLMLFCCCSTGCCGIFSCLASSCGACCDIRGTKLQRYEAFE--KVH
C6 VGLVLAVIMLLCMTNCCSCFKGLC-SCRHC--SYDEIEDVYPAVRVHNKR
C7 IFTSFILLYCCCSTGCCGCTSCLA----DCRGQRLQ------RYEVEKVH
C8 SLFSFLMLYCCCMTGCCGCCSCLTSCCFDCRGKRLQ------QYEVEKVH
C9 ILFSFLMLYCCMATGCCGCCSCLSNSCFDCGGRRLQ------RYEVEKVH
C10 ILFSFLMLYCCMATGCCGCCSCLSNSCFDCGGRRLQ------RYEVEKVH
C11 VGLVLAVIMLMCMTNCCSCFKGMC-DCRRCCGSYDSYDDVYPAVRVNKKR
C12 VGLALAVFMLCCMTNCCSGFRGIC-SCKQC--QYDDYADVYPAVRVSGKR
C13 VGLALAVFMLCCMTNCCSGFRGIC-SCRQC--QYDDYADVYPAVRVSGKR
C14 VALLLCVFFLLCCTGCGTSCLGKM-KCRNCCDSYED-------FDVEKIH
C15 VGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLH
C16 VGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLH
C17 LALALCVFFILCCTGCGTSCLGKL-KCNRCCDKYEEYD-----LEPHKIH
C18 VALALCVFFLLCCTGCGTNCMGKF-KCNRCCDSYDDYE-----VEPHKIH
: *.* * :
C1 YT
C2 YT
C3 YT
C4 VQ
C5 VQ
C6 TE
C7 IQ
C8 IQ
C9 IQ
C10 IQ
C11 TV
C12 TV
C13 TV
C14 VH
C15 YT
C16 YT
C17 IH
C18 VH
-- Starting log on Thu Oct 27 04:01:48 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus.result/original_alignment/codeml,JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C1 4656 sites
reading seq# 2 C2 4656 sites
reading seq# 3 C3 4656 sites
reading seq# 4 C4 4656 sites
reading seq# 5 C5 4656 sites
reading seq# 6 C6 4656 sites
reading seq# 7 C7 4656 sites
reading seq# 8 C8 4656 sites
reading seq# 9 C9 4656 sites
reading seq#10 C10 4656 sites
reading seq#11 C11 4656 sites
reading seq#12 C12 4656 sites
reading seq#13 C13 4656 sites
reading seq#14 C14 4656 sites
reading seq#15 C15 4656 sites
reading seq#16 C16 4656 sites
reading seq#17 C17 4656 sites
reading seq#18 C18 4656 sitesns = 18 ls = 4656
Reading sequences, sequential format..
Reading seq # 1: C1
Reading seq # 2: C2
Reading seq # 3: C3
Reading seq # 4: C4
Reading seq # 5: C5
Reading seq # 6: C6
Reading seq # 7: C7
Reading seq # 8: C8
Reading seq # 9: C9
Reading seq #10: C10
Reading seq #11: C11
Reading seq #12: C12
Reading seq #13: C13
Reading seq #14: C14
Reading seq #15: C15
Reading seq #16: C16
Reading seq #17: C17
Reading seq #18: C18
Sites with gaps or missing data are removed.
948 ambiguity characters in seq. 1
957 ambiguity characters in seq. 2
957 ambiguity characters in seq. 3
483 ambiguity characters in seq. 4
471 ambiguity characters in seq. 5
834 ambiguity characters in seq. 6
579 ambiguity characters in seq. 7
597 ambiguity characters in seq. 8
600 ambiguity characters in seq. 9
600 ambiguity characters in seq. 10
822 ambiguity characters in seq. 11
849 ambiguity characters in seq. 12
837 ambiguity characters in seq. 13
600 ambiguity characters in seq. 14
948 ambiguity characters in seq. 15
933 ambiguity characters in seq. 16
621 ambiguity characters in seq. 17
615 ambiguity characters in seq. 18
457 sites are removed. 1 2 3 4 5 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 48 53 54 55 56 57 58 59 60 61 67 75 76 77 78 79 80 81 82 83 84 85 98 101 107 108 109 110 111 112 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 142 143 149 150 152 156 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 188 189 190 191 192 193 194 195 196 200 201 202 203 204 205 206 207 208 209 210 211 212 224 231 232 242 243 244 251 252 254 255 256 257 258 259 268 278 279 280 281 288 289 290 296 297 300 301 302 316 317 318 319 320 330 331 332 340 341 342 343 349 350 351 352 353 354 355 356 357 358 386 387 388 389 390 398 399 400 401 402 403 404 421 422 423 441 454 455 466 470 471 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 520 542 543 544 545 546 547 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 594 595 596 600 601 602 603 604 605 606 607 608 609 610 620 621 622 623 624 625 626 627 629 631 632 635 636 643 644 645 646 647 653 654 655 666 667 668 669 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 728 729 730 731 732 733 734 735 736 747 748 768 777 792 793 814 815 819 820 821 822 823 824 846 857 858 859 860 861 862 863 864 865 866 867 868 869 870 871 872 873 874 875 876 877 878 879 886 887 888 889 909 910 911 912 913 914 915 916 917 918 919 920 921 922 923 924 925 931 932 937 995 1019 1020 1021 1027 1032 1035 1036 1037 1038 1039 1040 1042 1069 1075 1076 1077 1128 1129 1130 1131 1176 1177 1178 1179 1180 1181 1182 1183 1184 1185 1186 1187 1188 1189 1337 1338 1339 1353 1354 1355 1356 1357 1358 1359 1360 1386 1406 1407 1418 1419 1447 1448 1449 1450 1451 1452 1453 1454 1455 1456 1457 1458 1459 1460 1525 1526 1527 1528 1531 1532 1537 1538 1539 1540 1541 1542 1543 1546 1547
Sequences read..
Counting site patterns.. 0:00
Compressing, 1093 patterns at 1095 / 1095 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 1093 patterns at 1095 / 1095 sites (100.0%), 0:00
Counting codons..
1224 bytes for distance
1066768 bytes for conP
96184 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(1, 15, ((((((((10, 9), 7), 8), (4, 5)), ((14, 18), 17)), ((11, 6), (12, 13))), (2, 3)), 16)); MP score: 8359
8534144 bytes for conP, adjusted
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
20
0.090963 0.063494 0.105897 0.053034 0.108523 0.095803 0.107029 0.026364 0.043281 0.109354 0.020514 0.071694 0.034607 0.087306 0.034225 0.031285 0.027577 0.053934 0.095260 0.048442 0.028318 0.092895 0.107023 0.081617 0.037761 0.016162 0.091452 0.046546 0.106010 0.032083 0.046072 0.072341 0.024497 0.300000 0.604017 0.552752
ntime & nrate & np: 33 2 36
Bounds (np=36):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 9.999459
np = 36
lnL0 = -64800.999513
Iterating by ming2
Initial: fx= 64800.999513
x= 0.09096 0.06349 0.10590 0.05303 0.10852 0.09580 0.10703 0.02636 0.04328 0.10935 0.02051 0.07169 0.03461 0.08731 0.03423 0.03128 0.02758 0.05393 0.09526 0.04844 0.02832 0.09290 0.10702 0.08162 0.03776 0.01616 0.09145 0.04655 0.10601 0.03208 0.04607 0.07234 0.02450 0.30000 0.60402 0.55275
1 h-m-p 0.0000 0.0000 51619.7298 ++ 48234.969821 m 0.0000 41 | 1/36
2 h-m-p 0.0000 0.0000 5765.4889 ++ 47578.379142 m 0.0000 80 | 2/36
3 h-m-p 0.0000 0.0000 8310.9244 +YYYCYCYCC 46788.617986 8 0.0000 132 | 2/36
4 h-m-p 0.0000 0.0000 2070.7091 ++ 46677.344978 m 0.0000 171 | 2/36
5 h-m-p 0.0000 0.0001 4487.1105 YCYC 46559.838937 3 0.0000 214 | 2/36
6 h-m-p 0.0001 0.0003 1119.8448 YCCC 46504.226859 3 0.0002 258 | 2/36
7 h-m-p 0.0001 0.0005 537.4967 YCCC 46477.892085 3 0.0003 302 | 2/36
8 h-m-p 0.0004 0.0033 356.2896 CCC 46456.475007 2 0.0005 345 | 2/36
9 h-m-p 0.0001 0.0004 309.8102 +YC 46451.453617 1 0.0002 386 | 2/36
10 h-m-p 0.0003 0.0041 204.2184 YCC 46449.550429 2 0.0002 428 | 2/36
11 h-m-p 0.0003 0.0017 119.1002 CC 46447.288016 1 0.0004 469 | 2/36
12 h-m-p 0.0006 0.0183 85.6441 CCC 46444.764593 2 0.0008 512 | 2/36
13 h-m-p 0.0010 0.0063 70.3372 CC 46442.512260 1 0.0008 553 | 2/36
14 h-m-p 0.0007 0.0136 88.1327 CCC 46440.107272 2 0.0006 596 | 2/36
15 h-m-p 0.0006 0.0067 89.5492 YC 46431.814431 1 0.0013 636 | 2/36
16 h-m-p 0.0011 0.0112 104.3741 YC 46399.320855 1 0.0025 676 | 2/36
17 h-m-p 0.0009 0.0045 194.1321 YCCC 46320.268047 3 0.0018 720 | 2/36
18 h-m-p 0.0006 0.0028 268.2227 +YCCC 46122.038071 3 0.0018 765 | 2/36
19 h-m-p 0.0003 0.0015 444.4463 +YYCCCC 45818.738774 5 0.0010 813 | 2/36
20 h-m-p 0.0001 0.0004 712.5167 ++ 45670.926804 m 0.0004 852 | 3/36
21 h-m-p 0.0002 0.0009 549.9345 YCCCC 45612.060883 4 0.0004 898 | 3/36
22 h-m-p 0.0006 0.0032 163.7704 YCCC 45597.233506 3 0.0012 942 | 3/36
23 h-m-p 0.0013 0.0067 79.4375 CCC 45592.324290 2 0.0016 985 | 3/36
24 h-m-p 0.0036 0.0222 35.9078 YC 45590.155648 1 0.0022 1025 | 3/36
25 h-m-p 0.0038 0.0358 21.1250 YCC 45583.392697 2 0.0068 1067 | 3/36
26 h-m-p 0.0016 0.0078 40.1044 +CYC 45553.670673 2 0.0060 1110 | 3/36
27 h-m-p 0.0017 0.0086 117.8667 +YYYCCC 45360.458941 5 0.0063 1157 | 2/36
28 h-m-p 0.0000 0.0001 2663.8710 YCYC 45358.075844 3 0.0000 1200 | 2/36
29 h-m-p 0.0001 0.0005 289.4948 ++ 45274.321934 m 0.0005 1239 | 2/36
30 h-m-p 0.0020 0.0186 80.6064 CCC 45266.121554 2 0.0019 1282 | 2/36
31 h-m-p 0.0012 0.0058 37.6237 +CC 45257.385456 1 0.0046 1324 | 2/36
32 h-m-p 0.0027 0.0194 63.7794 YCCC 45233.170737 3 0.0045 1368 | 2/36
33 h-m-p 0.0053 0.0268 54.4174 YCCCC 45093.483977 4 0.0124 1414 | 2/36
34 h-m-p 0.0011 0.0053 124.1000 +YCCC 45070.116505 3 0.0027 1459 | 2/36
35 h-m-p 0.0031 0.0157 63.3012 CCC 45062.963887 2 0.0032 1502 | 2/36
36 h-m-p 0.0103 0.0529 19.8405 YCC 45056.901838 2 0.0073 1544 | 2/36
37 h-m-p 0.0094 0.0538 15.3502 +YCC 44978.391262 2 0.0280 1587 | 2/36
38 h-m-p 0.0019 0.0094 131.7538 CCC 44949.554698 2 0.0027 1630 | 2/36
39 h-m-p 0.0150 0.0796 23.4026 CC 44947.649955 1 0.0053 1671 | 2/36
40 h-m-p 0.2093 2.2953 0.5896 +CYC 44848.281360 2 0.7952 1714 | 2/36
41 h-m-p 1.6000 8.0000 0.2601 YCCC 44746.930552 3 2.8344 1792 | 2/36
42 h-m-p 0.7480 3.7401 0.4967 YCCCC 44642.745485 4 1.5605 1872 | 2/36
43 h-m-p 1.5810 7.9048 0.4269 +YCCCC 44444.536962 4 4.8127 1953 | 2/36
44 h-m-p 1.1386 5.6932 0.6134 CCCCCC 44355.771612 5 1.4720 2036 | 2/36
45 h-m-p 1.4322 7.1608 0.5943 CYCC 44267.227203 3 1.9986 2114 | 2/36
46 h-m-p 0.7220 3.6098 0.9098 CYCCC 44218.848278 4 1.2624 2194 | 2/36
47 h-m-p 0.6189 3.0943 0.4362 ++ 44186.073703 m 3.0943 2267 | 2/36
48 h-m-p 0.0000 0.0000 0.6423
h-m-p: 2.85903042e-16 1.42951521e-15 6.42331022e-01 44186.073703
.. | 2/36
49 h-m-p 0.0000 0.0000 1949.6101 CCC 44181.178871 2 0.0000 2414 | 2/36
50 h-m-p 0.0000 0.0001 918.0531 YYCC 44177.988276 3 0.0000 2457 | 2/36
51 h-m-p 0.0000 0.0001 566.4497 +YYCCC 44172.712011 4 0.0000 2503 | 2/36
52 h-m-p 0.0001 0.0020 192.2346 +YYCC 44165.488947 3 0.0004 2547 | 2/36
53 h-m-p 0.0002 0.0010 359.1078 CCCC 44159.670590 3 0.0002 2592 | 2/36
54 h-m-p 0.0001 0.0009 751.7419 YCC 44149.804343 2 0.0002 2634 | 2/36
55 h-m-p 0.0007 0.0154 244.2982 CYC 44141.829248 2 0.0008 2676 | 2/36
56 h-m-p 0.0004 0.0028 424.8236 CCCC 44130.953172 3 0.0006 2721 | 2/36
57 h-m-p 0.0006 0.0029 321.8916 YCCCC 44116.366384 4 0.0012 2767 | 2/36
58 h-m-p 0.0013 0.0125 296.3150 CCC 44100.929372 2 0.0016 2810 | 2/36
59 h-m-p 0.0018 0.0089 76.7919 CCCC 44097.152008 3 0.0022 2855 | 2/36
60 h-m-p 0.0022 0.0354 77.6681 +CCC 44083.475205 2 0.0106 2899 | 2/36
61 h-m-p 0.0035 0.0177 185.4430 YCCC 44079.648958 3 0.0014 2943 | 2/36
62 h-m-p 0.0042 0.0234 63.3129 YCCC 44074.028182 3 0.0074 2987 | 2/36
63 h-m-p 0.0023 0.0116 97.6502 CCC 44071.488451 2 0.0024 3030 | 2/36
64 h-m-p 0.0027 0.0136 54.1393 YCCC 44069.131882 3 0.0049 3074 | 2/36
65 h-m-p 0.0106 0.1306 25.1130 CCC 44066.673431 2 0.0147 3117 | 2/36
66 h-m-p 0.0303 0.1517 10.0925 YC 44066.124599 1 0.0129 3157 | 2/36
67 h-m-p 0.0184 0.3602 7.0494 CC 44065.462595 1 0.0273 3198 | 2/36
68 h-m-p 0.0294 0.6889 6.5388 CC 44064.696006 1 0.0349 3239 | 2/36
69 h-m-p 0.0363 0.2362 6.2766 YC 44064.192353 1 0.0219 3279 | 2/36
70 h-m-p 0.0171 0.4890 8.0279 YCC 44063.287296 2 0.0280 3321 | 2/36
71 h-m-p 0.0313 0.4143 7.1656 YC 44060.884419 1 0.0754 3361 | 2/36
72 h-m-p 0.0545 0.3592 9.9151 YC 44060.085211 1 0.0230 3401 | 2/36
73 h-m-p 0.0546 2.0521 4.1840 YC 44059.747452 1 0.0414 3441 | 2/36
74 h-m-p 0.0487 1.7446 3.5631 CC 44059.510435 1 0.0459 3482 | 2/36
75 h-m-p 0.0610 2.1230 2.6801 C 44059.306363 0 0.0595 3521 | 2/36
76 h-m-p 0.0536 0.9341 2.9738 CC 44059.041120 1 0.0653 3562 | 2/36
77 h-m-p 0.0953 1.2050 2.0383 YC 44058.882383 1 0.0528 3602 | 2/36
78 h-m-p 0.0489 0.6888 2.2000 CC 44058.632710 1 0.0709 3643 | 2/36
79 h-m-p 0.0490 1.6838 3.1876 CC 44058.387363 1 0.0554 3684 | 2/36
80 h-m-p 0.0632 1.8692 2.7927 CC 44058.246377 1 0.0514 3725 | 2/36
81 h-m-p 0.0490 3.7152 2.9267 CC 44058.126260 1 0.0559 3766 | 2/36
82 h-m-p 0.5459 5.9739 0.2997 YC 44058.077328 1 0.3869 3806 | 2/36
83 h-m-p 0.2934 2.9730 0.3953 YC 44058.042072 1 0.1994 3880 | 2/36
84 h-m-p 0.7241 8.0000 0.1088 CC 44058.035159 1 0.2460 3955 | 2/36
85 h-m-p 0.3087 8.0000 0.0867 YC 44058.027473 1 0.6076 4029 | 2/36
86 h-m-p 0.5474 8.0000 0.0963 C 44058.026720 0 0.1757 4102 | 2/36
87 h-m-p 1.6000 8.0000 0.0076 Y 44058.026479 0 1.1448 4175 | 2/36
88 h-m-p 1.6000 8.0000 0.0008 C 44058.026468 0 1.5307 4248 | 2/36
89 h-m-p 1.6000 8.0000 0.0002 C 44058.026466 0 1.6632 4321 | 2/36
90 h-m-p 1.6000 8.0000 0.0001 Y 44058.026466 0 1.1733 4394 | 2/36
91 h-m-p 1.6000 8.0000 0.0000 C 44058.026466 0 1.6000 4467 | 2/36
92 h-m-p 1.6000 8.0000 0.0000 Y 44058.026466 0 1.6000 4540 | 2/36
93 h-m-p 1.6000 8.0000 0.0000 Y 44058.026466 0 0.4000 4613 | 2/36
94 h-m-p 0.5273 8.0000 0.0000 ----C 44058.026466 0 0.0005 4690
Out..
lnL = -44058.026466
4691 lfun, 14073 eigenQcodon, 309606 P(t)
end of tree file.
Time used: 9:18
Model 2: PositiveSelection
TREE # 1
(1, 15, ((((((((10, 9), 7), 8), (4, 5)), ((14, 18), 17)), ((11, 6), (12, 13))), (2, 3)), 16)); MP score: 8359
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
20
0.032493 0.048120 0.021883 0.052462 0.086710 0.014546 0.088335 0.036933 0.044538 0.102875 0.087556 0.059866 0.036685 0.048843 0.040550 0.099421 0.055014 0.108755 0.017102 0.055447 0.097110 0.039339 0.053937 0.101552 0.026385 0.035704 0.059499 0.069497 0.033644 0.044587 0.028789 0.070601 0.061049 1.384142 1.150904 0.383494 0.195372 1.337536
ntime & nrate & np: 33 3 38
Bounds (np=38):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 7.548662
np = 38
lnL0 = -60891.391966
Iterating by ming2
Initial: fx= 60891.391966
x= 0.03249 0.04812 0.02188 0.05246 0.08671 0.01455 0.08834 0.03693 0.04454 0.10287 0.08756 0.05987 0.03669 0.04884 0.04055 0.09942 0.05501 0.10875 0.01710 0.05545 0.09711 0.03934 0.05394 0.10155 0.02639 0.03570 0.05950 0.06950 0.03364 0.04459 0.02879 0.07060 0.06105 1.38414 1.15090 0.38349 0.19537 1.33754
1 h-m-p 0.0000 0.0000 46030.2593 ++ 49677.334439 m 0.0000 43 | 1/38
2 h-m-p 0.0000 0.0000 5023.6943 ++ 49172.754098 m 0.0000 84 | 2/38
3 h-m-p 0.0000 0.0000 40323.9180 +YYYYC 49026.958160 4 0.0000 130 | 2/38
4 h-m-p 0.0000 0.0001 9642.2245 +CYCCC 48302.564604 4 0.0001 179 | 2/38
5 h-m-p 0.0000 0.0001 2018.1422 ++ 48063.050402 m 0.0001 220 | 2/38
6 h-m-p 0.0000 0.0000 9852.1616 +YCC 47922.394869 2 0.0000 265 | 2/38
7 h-m-p 0.0000 0.0000 3263.3921 ++ 47799.039963 m 0.0000 306 | 3/38
8 h-m-p 0.0000 0.0002 2618.1320 +CCC 47625.805562 2 0.0001 352 | 3/38
9 h-m-p 0.0000 0.0000 3611.4878 ++ 47580.732810 m 0.0000 393 | 3/38
10 h-m-p 0.0000 0.0004 3378.5789 +YYCC 47482.801191 3 0.0001 439 | 3/38
11 h-m-p 0.0001 0.0004 1238.0344 CCCC 47458.472821 3 0.0001 486 | 3/38
12 h-m-p 0.0001 0.0008 782.7887 CCC 47435.192503 2 0.0001 531 | 3/38
13 h-m-p 0.0001 0.0006 511.0949 CCCC 47418.764978 3 0.0002 578 | 3/38
14 h-m-p 0.0001 0.0003 759.1197 CCC 47409.630573 2 0.0001 623 | 3/38
15 h-m-p 0.0001 0.0022 473.7576 CCC 47396.558748 2 0.0002 668 | 3/38
16 h-m-p 0.0005 0.0038 196.3604 CCCC 47375.332575 3 0.0006 715 | 3/38
17 h-m-p 0.0004 0.0022 241.2427 YCCC 47329.869171 3 0.0008 761 | 3/38
18 h-m-p 0.0003 0.0017 466.1273 +YCC 47158.808710 2 0.0011 806 | 3/38
19 h-m-p 0.0000 0.0002 1383.8992 ++ 46958.790620 m 0.0002 847 | 3/38
20 h-m-p -0.0000 -0.0000 1333.4805
h-m-p: -4.75610779e-21 -2.37805389e-20 1.33348054e+03 46958.790620
.. | 3/38
21 h-m-p 0.0000 0.0000 4134.4654 ++ 46511.625223 m 0.0000 926 | 3/38
22 h-m-p 0.0000 0.0001 13948.2565 +CCCC 45978.602628 3 0.0001 974 | 3/38
23 h-m-p 0.0000 0.0001 3845.0001 YYCCC 45835.967958 4 0.0000 1021 | 3/38
24 h-m-p 0.0000 0.0000 3863.1902 ++ 45554.571987 m 0.0000 1062 | 4/38
25 h-m-p 0.0000 0.0002 2131.8810 +YYCCC 45320.814002 4 0.0002 1110 | 4/38
26 h-m-p 0.0003 0.0014 547.6969 CCCCC 45269.689849 4 0.0004 1159 | 3/38
27 h-m-p 0.0002 0.0015 901.6550 CYCCC 45264.952154 4 0.0000 1207 | 3/38
28 h-m-p 0.0000 0.0002 1826.6055 ++ 45220.925166 m 0.0002 1248 | 3/38
29 h-m-p 0.0003 0.0013 928.4717 CCC 45168.871627 2 0.0004 1293 | 3/38
30 h-m-p 0.0005 0.0025 422.5722 CCC 45130.587214 2 0.0007 1338 | 3/38
31 h-m-p 0.0005 0.0026 316.0062 YCCCC 45094.041273 4 0.0010 1386 | 3/38
32 h-m-p 0.0007 0.0037 159.2173 CCCC 45084.151574 3 0.0009 1433 | 3/38
33 h-m-p 0.0003 0.0015 357.7549 CCC 45077.463000 2 0.0003 1478 | 3/38
34 h-m-p 0.0015 0.0074 77.4636 CCC 45072.704833 2 0.0018 1523 | 3/38
35 h-m-p 0.0022 0.0110 61.0400 CCC 45068.886947 2 0.0020 1568 | 3/38
36 h-m-p 0.0013 0.0097 92.2247 CC 45064.069860 1 0.0015 1611 | 3/38
37 h-m-p 0.0019 0.0142 71.7617 CCC 45055.677446 2 0.0029 1656 | 3/38
38 h-m-p 0.0019 0.0110 109.6290 YCCC 45036.977632 3 0.0032 1702 | 3/38
39 h-m-p 0.0022 0.0157 158.9887 CCC 45000.140370 2 0.0035 1747 | 3/38
40 h-m-p 0.0024 0.0122 106.5520 YCCC 44949.111094 3 0.0047 1793 | 3/38
41 h-m-p 0.0010 0.0051 177.7322 ++ 44823.040071 m 0.0051 1834 | 3/38
42 h-m-p 0.0000 0.0000 193.7796
h-m-p: 2.50607841e-20 1.25303920e-19 1.93779635e+02 44823.040071
.. | 3/38
43 h-m-p 0.0000 0.0001 2102.0652 CCCCC 44783.888925 4 0.0000 1921 | 3/38
44 h-m-p 0.0000 0.0000 1606.2081 ++ 44742.687184 m 0.0000 1962 | 3/38
45 h-m-p 0.0000 0.0000 9573.7647 +YYYCCC 44718.915927 5 0.0000 2011 | 3/38
46 h-m-p 0.0000 0.0033 1055.4004 ++CYCCC 44594.845076 4 0.0005 2061 | 3/38
47 h-m-p 0.0002 0.0011 913.9184 +CCCC 44401.902484 3 0.0009 2109 | 3/38
48 h-m-p 0.0001 0.0003 2316.9962 YCCC 44341.353924 3 0.0001 2155 | 3/38
49 h-m-p 0.0002 0.0010 460.5939 YCCCC 44312.726759 4 0.0004 2203 | 3/38
50 h-m-p 0.0003 0.0013 721.2680 CCC 44293.833120 2 0.0002 2248 | 3/38
51 h-m-p 0.0004 0.0019 419.2337 +YCCC 44257.629634 3 0.0010 2295 | 3/38
52 h-m-p 0.0009 0.0046 228.0932 CYC 44244.543821 2 0.0010 2339 | 3/38
53 h-m-p 0.0012 0.0082 185.1785 YC 44225.614738 1 0.0024 2381 | 3/38
54 h-m-p 0.0012 0.0059 109.9182 YC 44217.728709 1 0.0024 2423 | 3/38
55 h-m-p 0.0018 0.0090 122.5108 CC 44211.684637 1 0.0021 2466 | 3/38
56 h-m-p 0.0030 0.0237 87.3151 YC 44207.947257 1 0.0023 2508 | 3/38
57 h-m-p 0.0014 0.0071 119.9495 CCC 44205.460946 2 0.0013 2553 | 3/38
58 h-m-p 0.0024 0.0242 63.3321 +YC 44200.181135 1 0.0062 2596 | 3/38
59 h-m-p 0.0044 0.0220 67.9356 YC 44197.610146 1 0.0033 2638 | 3/38
60 h-m-p 0.0063 0.0736 35.6988 CC 44195.523877 1 0.0060 2681 | 3/38
61 h-m-p 0.0105 0.1883 20.1983 CC 44193.253378 1 0.0126 2724 | 3/38
62 h-m-p 0.0076 0.1802 33.5792 YC 44187.671585 1 0.0184 2766 | 3/38
63 h-m-p 0.0226 0.1141 27.3794 YCC 44184.152269 2 0.0121 2810 | 3/38
64 h-m-p 0.0154 0.0770 19.1748 CC 44178.562014 1 0.0200 2853 | 3/38
65 h-m-p 0.0161 0.1428 23.7842 YCCC 44163.933198 3 0.0296 2899 | 3/38
66 h-m-p 0.0145 0.0727 32.8106 CC 44147.270604 1 0.0204 2942 | 3/38
67 h-m-p 0.0076 0.0380 43.5422 CCC 44137.151114 2 0.0107 2987 | 3/38
68 h-m-p 0.0194 0.1333 24.1660 CCC 44129.656442 2 0.0213 3032 | 3/38
69 h-m-p 0.0162 0.1000 31.7299 YCC 44119.993872 2 0.0278 3076 | 3/38
70 h-m-p 0.0380 0.1900 6.3315 CCC 44116.754537 2 0.0551 3121 | 3/38
71 h-m-p 0.0218 0.2599 16.0227 YC 44107.776357 1 0.0457 3163 | 3/38
72 h-m-p 0.0517 0.3197 14.1600 YCC 44101.830436 2 0.0299 3207 | 3/38
73 h-m-p 0.0223 0.1707 18.9540 CCC 44097.570497 2 0.0199 3252 | 3/38
74 h-m-p 0.0633 0.9265 5.9745 CCC 44095.154574 2 0.0737 3297 | 3/38
75 h-m-p 0.0362 0.6305 12.1851 YCCC 44091.280790 3 0.0578 3343 | 3/38
76 h-m-p 0.0244 0.1221 13.5374 YC 44086.785398 1 0.0563 3385 | 3/38
77 h-m-p 0.0216 0.2008 35.2137 CCCC 44078.843548 3 0.0387 3432 | 3/38
78 h-m-p 0.0880 0.4399 6.5991 YC 44077.611219 1 0.0359 3474 | 3/38
79 h-m-p 0.0252 0.4714 9.4036 +YCC 44073.957193 2 0.0726 3519 | 3/38
80 h-m-p 0.1603 2.5070 4.2606 YCCC 44066.797633 3 0.2839 3565 | 3/38
81 h-m-p 1.2403 6.2015 0.8692 CCCC 44060.215875 3 1.3462 3612 | 3/38
82 h-m-p 1.6000 8.0000 0.3147 CYC 44058.478465 2 1.9974 3691 | 3/38
83 h-m-p 1.6000 8.0000 0.2673 YCC 44058.194028 2 1.1327 3770 | 3/38
84 h-m-p 1.6000 8.0000 0.0868 C 44058.058751 0 1.5242 3846 | 3/38
85 h-m-p 1.6000 8.0000 0.0298 CC 44058.034544 1 2.0903 3924 | 3/38
86 h-m-p 1.6000 8.0000 0.0150 C 44058.028868 0 2.1933 4000 | 3/38
87 h-m-p 1.6000 8.0000 0.0047 C 44058.026880 0 1.9114 4076 | 3/38
88 h-m-p 1.6000 8.0000 0.0027 C 44058.026515 0 1.8245 4152 | 3/38
89 h-m-p 1.6000 8.0000 0.0006 C 44058.026475 0 1.9742 4228 | 3/38
90 h-m-p 1.6000 8.0000 0.0005 C 44058.026468 0 1.7657 4304 | 3/38
91 h-m-p 1.6000 8.0000 0.0002 C 44058.026467 0 2.0061 4380 | 3/38
92 h-m-p 1.6000 8.0000 0.0001 C 44058.026466 0 1.9152 4456 | 3/38
93 h-m-p 1.6000 8.0000 0.0000 C 44058.026466 0 1.7331 4532 | 3/38
94 h-m-p 1.6000 8.0000 0.0000 C 44058.026466 0 1.6000 4608 | 3/38
95 h-m-p 1.6000 8.0000 0.0000 Y 44058.026466 0 0.8179 4684 | 3/38
96 h-m-p 1.3677 8.0000 0.0000 C 44058.026466 0 1.3677 4760 | 3/38
97 h-m-p 1.6000 8.0000 0.0000 C 44058.026466 0 1.6000 4836 | 3/38
98 h-m-p 1.6000 8.0000 0.0000 ---------------Y 44058.026466 0 0.0000 4927
Out..
lnL = -44058.026466
4928 lfun, 19712 eigenQcodon, 487872 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -44111.251085 S = -42852.805422 -1249.304535
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 1093 patterns 24:02
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did 1093 / 1093 patterns 24:07end of tree file.
Time used: 24:07
Model 7: beta
TREE # 1
(1, 15, ((((((((10, 9), 7), 8), (4, 5)), ((14, 18), 17)), ((11, 6), (12, 13))), (2, 3)), 16)); MP score: 8359
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
20
0.064075 0.093276 0.015356 0.044895 0.068418 0.079367 0.108990 0.075567 0.051311 0.036059 0.062641 0.084605 0.104787 0.056376 0.080024 0.030212 0.045665 0.082657 0.062590 0.038712 0.037105 0.048049 0.021258 0.071585 0.022949 0.015568 0.062668 0.042403 0.067049 0.013148 0.029628 0.019610 0.064756 1.384142 0.481304 1.404482
ntime & nrate & np: 33 1 36
Bounds (np=36):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 12.766259
np = 36
lnL0 = -59714.122059
Iterating by ming2
Initial: fx= 59714.122059
x= 0.06407 0.09328 0.01536 0.04489 0.06842 0.07937 0.10899 0.07557 0.05131 0.03606 0.06264 0.08461 0.10479 0.05638 0.08002 0.03021 0.04567 0.08266 0.06259 0.03871 0.03711 0.04805 0.02126 0.07158 0.02295 0.01557 0.06267 0.04240 0.06705 0.01315 0.02963 0.01961 0.06476 1.38414 0.48130 1.40448
1 h-m-p 0.0000 0.0000 57465.5597 ++ 50116.979702 m 0.0000 41 | 1/36
2 h-m-p 0.0000 0.0000 8998.8236 ++ 49707.820082 m 0.0000 80 | 2/36
3 h-m-p 0.0000 0.0000 4086.2425 ++ 49293.763622 m 0.0000 119 | 2/36
4 h-m-p 0.0000 0.0000 20905.7669 +CCYC 49226.371706 3 0.0000 165 | 2/36
5 h-m-p 0.0000 0.0000 15017.4873 CYCYCCC 49041.976674 6 0.0000 215 | 2/36
6 h-m-p 0.0000 0.0001 3083.4376 YYC 49012.262065 2 0.0000 256 | 2/36
7 h-m-p 0.0000 0.0005 918.8336 +YCCC 48979.247603 3 0.0001 301 | 2/36
8 h-m-p 0.0000 0.0003 2305.9486 +YCCC 48904.234681 3 0.0001 346 | 2/36
9 h-m-p 0.0001 0.0004 2429.0014 CCCCC 48841.711011 4 0.0001 393 | 2/36
10 h-m-p 0.0000 0.0002 1643.1619 YYYC 48824.209729 3 0.0000 435 | 2/36
11 h-m-p 0.0001 0.0003 754.3018 CYC 48816.696890 2 0.0001 477 | 2/36
12 h-m-p 0.0001 0.0010 770.2511 CCC 48808.212904 2 0.0001 520 | 2/36
13 h-m-p 0.0002 0.0026 272.8244 CCC 48803.427962 2 0.0002 563 | 2/36
14 h-m-p 0.0001 0.0014 413.3716 CC 48799.270516 1 0.0001 604 | 2/36
15 h-m-p 0.0001 0.0007 248.0646 YC 48798.237817 1 0.0001 644 | 2/36
16 h-m-p 0.0001 0.0013 224.6420 CC 48796.975597 1 0.0001 685 | 2/36
17 h-m-p 0.0001 0.0030 218.7178 YC 48794.765056 1 0.0002 725 | 2/36
18 h-m-p 0.0003 0.0036 120.0405 CC 48793.850703 1 0.0001 766 | 2/36
19 h-m-p 0.0001 0.0030 183.3280 YC 48791.311157 1 0.0002 806 | 2/36
20 h-m-p 0.0002 0.0027 164.1058 CCC 48787.079273 2 0.0002 849 | 2/36
21 h-m-p 0.0002 0.0037 180.7483 YC 48771.152448 1 0.0005 889 | 2/36
22 h-m-p 0.0002 0.0012 332.1193 CCCC 48736.787625 3 0.0003 934 | 2/36
23 h-m-p 0.0003 0.0016 357.8933 YCCCC 48599.584267 4 0.0006 980 | 2/36
24 h-m-p 0.0001 0.0006 822.9444 +YCCCC 48305.613472 4 0.0003 1027 | 2/36
25 h-m-p 0.0001 0.0004 1172.0397 +CCCC 47869.341549 3 0.0004 1073 | 2/36
26 h-m-p 0.0001 0.0003 2062.5780 CYYC 47749.825791 3 0.0001 1116 | 2/36
27 h-m-p 0.0000 0.0002 1118.6685 YCYCCC 47709.200826 5 0.0001 1163 | 2/36
28 h-m-p 0.0001 0.0005 686.7888 CCC 47688.996181 2 0.0001 1206 | 2/36
29 h-m-p 0.0002 0.0010 358.9228 CCC 47680.082395 2 0.0002 1249 | 2/36
30 h-m-p 0.0001 0.0007 341.5692 YCC 47676.486102 2 0.0001 1291 | 2/36
31 h-m-p 0.0003 0.0017 142.4320 CC 47673.761867 1 0.0003 1332 | 2/36
32 h-m-p 0.0005 0.0026 70.7638 YCC 47671.436520 2 0.0004 1374 | 2/36
33 h-m-p 0.0004 0.0120 74.8664 +CCC 47649.059044 2 0.0017 1418 | 2/36
34 h-m-p 0.0015 0.0090 87.6327 YCCC 47483.720613 3 0.0035 1462 | 2/36
35 h-m-p 0.0002 0.0011 401.0870 YCCCC 47435.441682 4 0.0004 1508 | 2/36
36 h-m-p 0.0024 0.0119 42.0968 CC 47434.651291 1 0.0006 1549 | 2/36
37 h-m-p 0.0178 0.7429 1.3188 +++ 47031.121718 m 0.7429 1589 | 2/36
38 h-m-p 0.3057 1.5287 0.5769 +YCYCCC 46221.698206 5 1.3598 1637 | 2/36
39 h-m-p 1.0330 5.1651 0.3170 +CCCC 45552.024032 3 3.8319 1717 | 2/36
40 h-m-p 1.6000 8.0000 0.5163 +YCYCCC 44940.299708 5 4.0116 1799 | 2/36
41 h-m-p 1.6000 8.0000 0.3982 +YYCCC 44359.542203 4 5.4153 1879 | 2/36
42 h-m-p 1.6000 8.0000 0.5495 YCYCCC 44166.794865 5 3.1930 1960 | 2/36
43 h-m-p 1.6000 8.0000 0.5864 +YCCC 43992.339568 3 4.1165 2039 | 2/36
44 h-m-p 1.6000 8.0000 0.1226 ++ 43782.125139 m 8.0000 2112 | 2/36
45 h-m-p 0.3861 1.9306 0.3679 +YCCCC 43730.455395 4 1.0499 2193 | 2/36
46 h-m-p 1.2784 7.3411 0.3021 CYCCCC 43668.895881 5 1.8568 2275 | 2/36
47 h-m-p 0.9390 4.6950 0.2604 +CYC 43590.269366 2 3.9589 2352 | 2/36
48 h-m-p 0.8675 4.3377 0.4739 +CCCC 43546.187824 3 2.9180 2432 | 2/36
49 h-m-p 0.0764 0.3818 0.2323 ++ 43542.820503 m 0.3818 2505 | 2/36
50 h-m-p 0.1032 3.5619 0.8596 +YCCC 43528.142429 3 0.9570 2584 | 2/36
51 h-m-p 1.2709 6.3544 0.0980 ++ 43501.369296 m 6.3544 2657 | 2/36
52 h-m-p 1.6000 8.0000 0.1049 CYCCC 43494.594289 4 1.0070 2738 | 2/36
53 h-m-p 0.6716 5.8835 0.1573 YC 43488.387337 1 1.5884 2812 | 2/36
54 h-m-p 1.0570 5.2852 0.2361 +YYCCC 43469.207679 4 3.6391 2892 | 2/36
55 h-m-p 1.3020 6.5099 0.3470 CCCC 43452.167309 3 1.9036 2971 | 2/36
56 h-m-p 0.6091 3.0456 0.2936 YCCC 43445.949184 3 1.5380 3049 | 2/36
57 h-m-p 1.6000 8.0000 0.1008 +YC 43437.995458 1 4.8842 3124 | 2/36
58 h-m-p 0.9539 4.7695 0.2524 +CYC 43420.793695 2 3.7508 3201 | 2/36
59 h-m-p 1.6000 8.0000 0.0663 CC 43417.727248 1 1.4135 3276 | 2/36
60 h-m-p 0.6505 3.2524 0.1162 +YYC 43414.569124 2 2.3689 3352 | 2/36
61 h-m-p 1.3013 8.0000 0.2115 YCC 43404.826815 2 2.7015 3428 | 2/36
62 h-m-p 1.2294 8.0000 0.4647 YCCC 43386.849962 3 2.4253 3506 | 2/36
63 h-m-p 1.6000 8.0000 0.1612 CCC 43384.362590 2 1.7866 3583 | 2/36
64 h-m-p 1.6000 8.0000 0.0731 CCCC 43382.373676 3 2.8149 3662 | 2/36
65 h-m-p 1.6000 8.0000 0.0641 ++ 43377.527841 m 8.0000 3735 | 2/36
66 h-m-p 1.3550 6.7749 0.2006 YCCC 43371.889258 3 2.5194 3813 | 2/36
67 h-m-p 1.6000 8.0000 0.0669 YCC 43370.985532 2 1.1209 3889 | 2/36
68 h-m-p 1.0372 8.0000 0.0723 +CC 43369.564647 1 3.7030 3965 | 2/36
69 h-m-p 1.6000 8.0000 0.0785 +CC 43365.002703 1 6.7032 4041 | 2/36
70 h-m-p 1.6000 8.0000 0.2377 CCC 43362.218636 2 2.2794 4118 | 2/36
71 h-m-p 1.6000 8.0000 0.1882 +YC 43359.116406 1 4.3911 4193 | 2/36
72 h-m-p 1.1521 5.7603 0.1511 CCCC 43357.292204 3 2.0053 4272 | 2/36
73 h-m-p 1.6000 8.0000 0.0667 CCC 43356.719723 2 2.3387 4349 | 2/36
74 h-m-p 1.6000 8.0000 0.0658 +CC 43354.966190 1 5.7549 4425 | 2/36
75 h-m-p 1.2510 6.2550 0.1930 +YCCC 43350.401539 3 3.4648 4504 | 2/36
76 h-m-p 1.6000 8.0000 0.3813 YCC 43349.422150 2 1.0911 4580 | 2/36
77 h-m-p 1.6000 8.0000 0.1292 CCC 43349.066374 2 2.0092 4657 | 2/36
78 h-m-p 1.6000 8.0000 0.0212 ++ 43347.609838 m 8.0000 4730 | 2/36
79 h-m-p 1.6000 8.0000 0.0987 CC 43346.606883 1 1.8092 4805 | 2/36
80 h-m-p 1.6000 8.0000 0.0614 C 43346.429418 0 1.6138 4878 | 2/36
81 h-m-p 1.6000 8.0000 0.0186 ++ 43346.038031 m 8.0000 4951 | 2/36
82 h-m-p 1.6000 8.0000 0.0843 +CC 43344.193274 1 6.0674 5027 | 2/36
83 h-m-p 1.6000 8.0000 0.3141 CC 43342.993336 1 1.9826 5102 | 2/36
84 h-m-p 1.6000 8.0000 0.0490 YC 43342.713911 1 2.7012 5176 | 2/36
85 h-m-p 1.6000 8.0000 0.0357 ++ 43341.473404 m 8.0000 5249 | 2/36
86 h-m-p 1.0444 8.0000 0.2738 YC 43339.519200 1 2.2071 5323 | 2/36
87 h-m-p 1.6000 8.0000 0.3732 CCC 43339.112769 2 1.3930 5400 | 2/36
88 h-m-p 1.6000 8.0000 0.0429 YC 43339.055029 1 2.5937 5474 | 2/36
89 h-m-p 1.6000 8.0000 0.0243 ++ 43338.722204 m 8.0000 5547 | 2/36
90 h-m-p 1.6000 8.0000 0.0939 +YC 43337.473794 1 4.5144 5622 | 2/36
91 h-m-p 1.6000 8.0000 0.1642 CCC 43336.753680 2 1.8112 5699 | 2/36
92 h-m-p 1.6000 8.0000 0.0254 YC 43336.630799 1 3.9560 5773 | 2/36
93 h-m-p 1.6000 8.0000 0.0228 ++ 43335.770148 m 8.0000 5846 | 2/36
94 h-m-p 1.4465 8.0000 0.1262 CC 43335.522359 1 1.2741 5921 | 2/36
95 h-m-p 1.6000 8.0000 0.0316 ++ 43335.352398 m 8.0000 5994 | 2/36
96 h-m-p 1.6000 8.0000 0.0297 ++ 43334.040627 m 8.0000 6067 | 2/36
97 h-m-p 0.8007 8.0000 0.2968 YC 43333.241277 1 1.3226 6141 | 2/36
98 h-m-p 1.6000 8.0000 0.0731 CC 43333.180383 1 1.4567 6216 | 2/36
99 h-m-p 1.6000 8.0000 0.0096 ++ 43332.977198 m 8.0000 6289 | 2/36
100 h-m-p 0.1686 8.0000 0.4537 +YC 43331.226490 1 1.6285 6364 | 2/36
101 h-m-p 1.6000 8.0000 0.2714 YC 43329.242238 1 3.4670 6438 | 2/36
102 h-m-p 1.6000 8.0000 0.1168 C 43329.180655 0 1.4852 6511 | 2/36
103 h-m-p 1.6000 8.0000 0.0186 ++ 43328.905001 m 8.0000 6584 | 2/36
104 h-m-p 0.5167 8.0000 0.2887 +CCC 43327.533101 2 2.1315 6662 | 2/36
105 h-m-p 1.4988 8.0000 0.4106 +YC 43325.367186 1 3.8672 6737 | 2/36
106 h-m-p 1.6000 8.0000 0.2109 YC 43325.285104 1 1.2249 6811 | 2/36
107 h-m-p 1.6000 8.0000 0.0138 ++ 43325.050483 m 8.0000 6884 | 2/36
108 h-m-p 1.6000 8.0000 0.0652 +YC 43324.075060 1 4.2086 6959 | 2/36
109 h-m-p 1.2275 8.0000 0.2236 CC 43323.495187 1 1.7186 7034 | 2/36
110 h-m-p 1.6000 8.0000 0.0162 YC 43323.461612 1 3.6319 7108 | 2/36
111 h-m-p 1.6000 8.0000 0.0163 ++ 43323.127551 m 8.0000 7181 | 2/36
112 h-m-p 0.3904 7.2968 0.3343 +YC 43322.464499 1 1.0829 7256 | 2/36
113 h-m-p 1.6000 8.0000 0.0379 C 43322.450550 0 1.3737 7329 | 2/36
114 h-m-p 1.6000 8.0000 0.0175 +Y 43322.439756 0 6.7756 7403 | 2/36
115 h-m-p 1.6000 8.0000 0.0072 ++ 43322.318308 m 8.0000 7476 | 2/36
116 h-m-p 0.4017 8.0000 0.1439 +YC 43322.076771 1 1.1716 7551 | 2/36
117 h-m-p 1.6000 8.0000 0.0763 C 43322.059470 0 1.6600 7624 | 2/36
118 h-m-p 1.6000 8.0000 0.0057 ++ 43322.033308 m 8.0000 7697 | 2/36
119 h-m-p 0.5095 8.0000 0.0897 +CC 43321.867407 1 2.8389 7773 | 2/36
120 h-m-p 1.6000 8.0000 0.0623 ++ 43320.896592 m 8.0000 7846 | 2/36
121 h-m-p 1.6000 8.0000 0.1046 YC 43320.853564 1 1.0372 7920 | 2/36
122 h-m-p 1.6000 8.0000 0.0121 ++ 43320.846688 m 8.0000 7993 | 2/36
123 h-m-p 1.6000 8.0000 0.0124 ++ 43320.763192 m 8.0000 8066 | 2/36
124 h-m-p 0.9151 8.0000 0.1082 CC 43320.655459 1 1.1268 8141 | 2/36
125 h-m-p 1.6000 8.0000 0.0401 C 43320.649193 0 1.5884 8214 | 2/36
126 h-m-p 1.6000 8.0000 0.0037 ++ 43320.634212 m 8.0000 8287 | 2/36
127 h-m-p 0.1318 8.0000 0.2221 ++YC 43320.473779 1 1.4869 8363 | 2/36
128 h-m-p 1.6000 8.0000 0.0859 YC 43320.383078 1 2.6500 8437 | 2/36
129 h-m-p 1.6000 8.0000 0.0142 +C 43320.377063 0 5.7127 8511 | 2/36
130 h-m-p 1.6000 8.0000 0.0043 ++ 43320.307044 m 8.0000 8584 | 2/36
131 h-m-p 0.1406 8.0000 0.2475 +YC 43320.074879 1 1.0439 8659 | 2/36
132 h-m-p 1.6000 8.0000 0.0297 C 43320.070939 0 1.5876 8732 | 2/36
133 h-m-p 1.6000 8.0000 0.0047 ++ 43320.060003 m 8.0000 8805 | 2/36
134 h-m-p 0.2471 8.0000 0.1522 +YC 43319.964080 1 2.2638 8880 | 2/36
135 h-m-p 1.6000 8.0000 0.0552 ++ 43319.461211 m 8.0000 8953 | 2/36
136 h-m-p 1.6000 8.0000 0.1267 YC 43319.429396 1 1.0404 9027 | 2/36
137 h-m-p 1.6000 8.0000 0.0126 +C 43319.427159 0 5.4798 9101 | 2/36
138 h-m-p 1.6000 8.0000 0.0050 ++ 43319.398065 m 8.0000 9174 | 2/36
139 h-m-p 0.2267 8.0000 0.1771 +CC 43319.315694 1 1.0221 9250 | 2/36
140 h-m-p 1.6000 8.0000 0.0159 C 43319.314508 0 1.7189 9323 | 2/36
141 h-m-p 1.6000 8.0000 0.0025 ++ 43319.309795 m 8.0000 9396 | 2/36
142 h-m-p 0.2050 8.0000 0.0970 +YC 43319.273419 1 1.4514 9471 | 2/36
143 h-m-p 1.6000 8.0000 0.0544 CC 43319.258622 1 2.2330 9546 | 2/36
144 h-m-p 1.6000 8.0000 0.0017 ++ 43319.255707 m 8.0000 9619 | 2/36
145 h-m-p 0.2434 8.0000 0.0551 +YC 43319.228022 1 2.3329 9694 | 2/36
146 h-m-p 1.6000 8.0000 0.0262 ++ 43319.096129 m 8.0000 9767 | 2/36
147 h-m-p 1.6000 8.0000 0.0361 YC 43319.092521 1 1.0590 9841 | 2/36
148 h-m-p 1.6000 8.0000 0.0020 ++ 43319.089453 m 8.0000 9914 | 2/36
149 h-m-p 0.2153 8.0000 0.0729 +YC 43319.057300 1 1.7750 9989 | 2/36
150 h-m-p 1.6000 8.0000 0.0588 YC 43319.028946 1 3.0908 10063 | 2/36
151 h-m-p 1.6000 8.0000 0.0014 ++ 43319.027941 m 8.0000 10136 | 2/36
152 h-m-p 1.3158 8.0000 0.0083 +C 43319.021388 0 5.2353 10210 | 2/36
153 h-m-p 1.6000 8.0000 0.0159 +YC 43318.999512 1 5.1401 10285 | 2/36
154 h-m-p 1.6000 8.0000 0.0020 C 43318.999464 0 2.5011 10358 | 2/36
155 h-m-p 1.6000 8.0000 0.0003 ++ 43318.999055 m 8.0000 10431 | 2/36
156 h-m-p 0.0354 8.0000 0.0632 ++YC 43318.989573 1 1.2604 10507 | 2/36
157 h-m-p 1.6000 8.0000 0.0139 C 43318.988020 0 1.8014 10580 | 2/36
158 h-m-p 1.6000 8.0000 0.0007 C 43318.988018 0 2.3063 10653 | 2/36
159 h-m-p 1.6000 8.0000 0.0001 ++ 43318.987993 m 8.0000 10726 | 2/36
160 h-m-p 0.0414 8.0000 0.0133 ++Y 43318.987287 0 1.4386 10801 | 2/36
161 h-m-p 1.6000 8.0000 0.0057 C 43318.986989 0 2.3938 10874 | 2/36
162 h-m-p 1.6000 8.0000 0.0001 Y 43318.986989 0 0.9932 10947 | 2/36
163 h-m-p 1.6000 8.0000 0.0000 C 43318.986989 0 0.4000 11020 | 2/36
164 h-m-p 0.2410 8.0000 0.0000 Y 43318.986989 0 0.0603 11093
Out..
lnL = -43318.986989
11094 lfun, 122034 eigenQcodon, 3661020 P(t)
end of tree file.
Time used: 2:12:53
Model 8: beta&w>1
TREE # 1
(1, 15, ((((((((10, 9), 7), 8), (4, 5)), ((14, 18), 17)), ((11, 6), (12, 13))), (2, 3)), 16)); MP score: 8359
1 node(s) used for scaling (Yang 2000 J Mol Evol 51:423-432):
20
0.026073 0.068773 0.079619 0.026849 0.021354 0.046543 0.082146 0.065132 0.027631 0.061372 0.049084 0.030303 0.035207 0.044471 0.059243 0.077825 0.098553 0.100094 0.045084 0.092698 0.108809 0.060987 0.055995 0.040558 0.103690 0.086298 0.105066 0.010460 0.050733 0.069165 0.072788 0.104063 0.014818 1.351185 0.900000 1.061632 1.061329 1.300000
ntime & nrate & np: 33 2 38
Bounds (np=38):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 7.883049
np = 38
lnL0 = -60390.758719
Iterating by ming2
Initial: fx= 60390.758719
x= 0.02607 0.06877 0.07962 0.02685 0.02135 0.04654 0.08215 0.06513 0.02763 0.06137 0.04908 0.03030 0.03521 0.04447 0.05924 0.07782 0.09855 0.10009 0.04508 0.09270 0.10881 0.06099 0.05600 0.04056 0.10369 0.08630 0.10507 0.01046 0.05073 0.06916 0.07279 0.10406 0.01482 1.35119 0.90000 1.06163 1.06133 1.30000
1 h-m-p 0.0000 0.0000 44195.0547 ++ 48579.865978 m 0.0000 43 | 0/38
2 h-m-p 0.0000 0.0000 8738.3681 ++ 48176.811835 m 0.0000 84 | 1/38
3 h-m-p 0.0000 0.0000 5690.6175 ++ 47865.715820 m 0.0000 125 | 2/38
4 h-m-p 0.0000 0.0000 13442.7217 ++ 47760.825133 m 0.0000 166 | 3/38
5 h-m-p 0.0000 0.0003 2835.2886 +++ 46807.187479 m 0.0003 208 | 3/38
6 h-m-p 0.0000 0.0000 37132.2931 YCYCCC 46676.118684 5 0.0000 257 | 3/38
7 h-m-p 0.0000 0.0000 3325.9283 ++ 46651.561624 m 0.0000 298 | 3/38
8 h-m-p 0.0001 0.0007 574.7888 +YCCC 46621.515823 3 0.0002 345 | 3/38
9 h-m-p 0.0001 0.0004 1195.6429 CCC 46601.120814 2 0.0001 390 | 3/38
10 h-m-p 0.0002 0.0010 581.9702 CCC 46581.856209 2 0.0002 435 | 3/38
11 h-m-p 0.0003 0.0019 497.2595 CYC 46565.805858 2 0.0003 479 | 3/38
12 h-m-p 0.0004 0.0022 317.8656 YC 46559.754911 1 0.0002 521 | 3/38
13 h-m-p 0.0002 0.0010 310.7163 CCC 46553.332298 2 0.0003 566 | 3/38
14 h-m-p 0.0005 0.0033 168.7215 YCC 46549.088090 2 0.0004 610 | 3/38
15 h-m-p 0.0006 0.0048 125.1252 CCC 46544.862553 2 0.0007 655 | 3/38
16 h-m-p 0.0009 0.0047 95.2468 CCC 46539.858833 2 0.0011 700 | 3/38
17 h-m-p 0.0006 0.0030 101.9957 CCC 46535.305653 2 0.0008 745 | 3/38
18 h-m-p 0.0006 0.0035 141.9941 +YCCC 46516.787762 3 0.0016 792 | 3/38
19 h-m-p 0.0002 0.0010 300.0972 +YYYCCC 46490.658055 5 0.0008 841 | 3/38
20 h-m-p 0.0002 0.0008 1307.7849 YCCC 46452.856947 3 0.0003 887 | 3/38
21 h-m-p 0.0001 0.0005 823.8429 +CYYCC 46402.060236 4 0.0004 935 | 3/38
22 h-m-p 0.0002 0.0012 326.3139 YC 46385.708840 1 0.0004 977 | 3/38
23 h-m-p 0.0013 0.0065 102.1327 YCCC 46324.724711 3 0.0025 1023 | 3/38
24 h-m-p 0.0004 0.0018 329.7250 +CYCC 46130.216262 3 0.0016 1070 | 3/38
25 h-m-p 0.0002 0.0010 1349.5894 +YCYCCC 45829.695539 5 0.0006 1120 | 2/38
26 h-m-p 0.0000 0.0001 6458.5515 CYYC 45826.858107 3 0.0000 1166 | 2/38
27 h-m-p 0.0000 0.0007 1078.5193 ++CCCCC 45738.772625 4 0.0003 1217 | 2/38
28 h-m-p 0.0002 0.0012 619.8027 YCCC 45668.145830 3 0.0005 1263 | 2/38
29 h-m-p 0.0013 0.0063 182.6287 YC 45652.811447 1 0.0010 1305 | 2/38
30 h-m-p 0.0008 0.0038 107.5590 CCC 45648.993586 2 0.0008 1350 | 2/38
31 h-m-p 0.0014 0.0087 60.4996 YC 45647.931786 1 0.0006 1392 | 2/38
32 h-m-p 0.0010 0.0156 35.2204 +YCC 45644.012843 2 0.0031 1437 | 2/38
33 h-m-p 0.0071 0.0455 15.1799 YCCC 45618.483724 3 0.0129 1483 | 2/38
34 h-m-p 0.0005 0.0026 98.0552 +YYCYCCC 45510.357432 6 0.0024 1534 | 2/38
35 h-m-p 0.0004 0.0019 98.4602 YCCC 45503.933882 3 0.0010 1580 | 2/38
36 h-m-p 0.0031 0.0308 31.0369 CYC 45498.709196 2 0.0036 1624 | 2/38
37 h-m-p 0.0016 0.0078 60.9138 YCCC 45482.271197 3 0.0037 1670 | 2/38
38 h-m-p 0.0062 0.0417 36.3726 +CCC 45265.467354 2 0.0256 1716 | 2/38
39 h-m-p 0.0015 0.0073 116.4599 CYC 45254.818075 2 0.0014 1760 | 2/38
40 h-m-p 0.0188 0.0938 7.9014 +CYC 45188.570546 2 0.0703 1805 | 2/38
41 h-m-p 0.0002 0.0009 87.6332 ++ 45148.187207 m 0.0009 1846 | 2/38
42 h-m-p -0.0000 -0.0000 2.2520
h-m-p: -0.00000000e+00 -0.00000000e+00 2.25196526e+00 45148.187207
.. | 2/38
43 h-m-p 0.0000 0.0000 2051.2926 ++ 45124.690342 m 0.0000 1925 | 2/38
44 h-m-p 0.0000 0.0003 12829.0838 CYCCC 45069.450314 4 0.0000 1973 | 2/38
45 h-m-p 0.0000 0.0000 2279.4074 ++ 45056.393232 m 0.0000 2014 | 3/38
46 h-m-p 0.0000 0.0001 3769.6272 ++ 44788.464670 m 0.0001 2055 | 3/38
47 h-m-p 0.0000 0.0000 15803.8163 ++ 44525.332218 m 0.0000 2096 | 3/38
48 h-m-p 0.0001 0.0005 958.5517 ++ 44411.229958 m 0.0005 2137 | 3/38
49 h-m-p -0.0000 -0.0000 588.2264
h-m-p: -1.42317983e-20 -7.11589915e-20 5.88226396e+02 44411.229958
.. | 3/38
50 h-m-p 0.0000 0.0000 2389.6631 ++ 44392.116424 m 0.0000 2216 | 4/38
51 h-m-p 0.0000 0.0001 1807.3142 ++ 44314.020721 m 0.0001 2257 | 4/38
52 h-m-p 0.0001 0.0006 1006.9328 YCCC 44261.480173 3 0.0002 2303 | 4/38
53 h-m-p 0.0000 0.0002 1500.3607 +YYCC 44195.686392 3 0.0002 2349 | 4/38
54 h-m-p 0.0001 0.0004 872.6138 ++ 44102.590136 m 0.0004 2390 | 4/38
55 h-m-p 0.0002 0.0017 1496.3799 +CCCC 43925.956310 3 0.0008 2438 | 4/38
56 h-m-p 0.0000 0.0000 858.2055 ++ 43921.407228 m 0.0000 2479 | 4/38
57 h-m-p -0.0000 -0.0000 487.8448
h-m-p: -2.42711547e-21 -1.21355773e-20 4.87844752e+02 43921.407228
.. | 4/38
58 h-m-p 0.0000 0.0001 1233.3045 ++ 43867.034067 m 0.0001 2558 | 4/38
59 h-m-p 0.0000 0.0000 1887.7542 +YYCCCC 43842.181869 5 0.0000 2608 | 4/38
60 h-m-p 0.0000 0.0012 993.2171 +YCCC 43812.740193 3 0.0001 2655 | 4/38
61 h-m-p 0.0002 0.0012 502.0526 CCCCC 43783.357917 4 0.0003 2704 | 4/38
62 h-m-p 0.0006 0.0029 278.0926 CCCCC 43759.308321 4 0.0009 2753 | 4/38
63 h-m-p 0.0003 0.0022 793.1603 YCC 43716.711675 2 0.0007 2797 | 4/38
64 h-m-p 0.0001 0.0004 1644.0922 ++ 43653.531486 m 0.0004 2838 | 4/38
65 h-m-p 0.0004 0.0021 923.8775 +CYC 43544.634470 2 0.0018 2883 | 3/38
66 h-m-p 0.0000 0.0001 5363.0366 YYCC 43543.879737 3 0.0000 2928 | 3/38
67 h-m-p 0.0000 0.0008 1632.1710 +++ 43475.476427 m 0.0008 2970 | 3/38
68 h-m-p -0.0000 -0.0000 158.6715
h-m-p: -2.65356612e-19 -1.32678306e-18 1.58671482e+02 43475.476427
.. | 3/38
69 h-m-p 0.0000 0.0001 483.6483 +CYCCC 43468.561940 4 0.0000 3057 | 3/38
70 h-m-p 0.0000 0.0000 1065.4856 +YYCCC 43463.475116 4 0.0000 3105 | 3/38
71 h-m-p 0.0000 0.0000 1250.6250 ++ 43459.539161 m 0.0000 3146 | 3/38
72 h-m-p 0.0000 0.0002 2311.5945 +CCC 43448.026944 2 0.0000 3192 | 3/38
73 h-m-p 0.0003 0.0020 311.7470 CCCC 43437.644863 3 0.0003 3239 | 3/38
74 h-m-p 0.0011 0.0054 83.7940 YCC 43435.526222 2 0.0007 3283 | 3/38
75 h-m-p 0.0003 0.0033 202.4435 +YCC 43430.707735 2 0.0008 3328 | 3/38
76 h-m-p 0.0009 0.0046 126.6414 YCCC 43425.587991 3 0.0017 3374 | 3/38
77 h-m-p 0.0012 0.0070 170.1927 CYC 43421.248081 2 0.0013 3418 | 3/38
78 h-m-p 0.0009 0.0159 245.2433 +YCCC 43385.762090 3 0.0079 3465 | 3/38
79 h-m-p 0.0007 0.0034 513.7796 YC 43372.440683 1 0.0015 3507 | 3/38
80 h-m-p 0.0039 0.0253 192.2461 CCC 43354.091694 2 0.0058 3552 | 3/38
81 h-m-p 0.0011 0.0057 418.8846 YCCC 43338.170583 3 0.0024 3598 | 3/38
82 h-m-p 0.0027 0.0137 182.9521 CCC 43332.430873 2 0.0022 3643 | 3/38
83 h-m-p 0.0054 0.0271 63.1154 YC 43330.351784 1 0.0028 3685 | 3/38
84 h-m-p 0.0018 0.0218 100.7821 CCC 43327.791436 2 0.0025 3730 | 3/38
85 h-m-p 0.0159 0.0936 15.9948 CCC 43326.555285 2 0.0134 3775 | 2/38
86 h-m-p 0.0131 0.0923 16.3629 CC 43325.115272 1 0.0162 3818 | 2/38
87 h-m-p 0.0152 0.2067 17.4981 YCCC 43322.894879 3 0.0271 3864 | 2/38
88 h-m-p 0.0203 0.1420 23.4332 CCC 43320.039084 2 0.0279 3909 | 2/38
89 h-m-p 0.0491 0.3052 13.3141 YC 43318.531497 1 0.0288 3951 | 2/38
90 h-m-p 0.0276 0.1382 8.7262 YCCC 43316.670026 3 0.0579 3997 | 2/38
91 h-m-p 0.0257 0.4495 19.6913 YC 43313.332607 1 0.0464 4039 | 2/38
92 h-m-p 0.0338 0.1690 25.7168 CCC 43310.766703 2 0.0288 4084 | 2/38
93 h-m-p 0.0760 0.3798 6.6609 CC 43308.704111 1 0.0897 4127 | 2/38
94 h-m-p 0.0467 1.3570 12.7842 +YCC 43302.967880 2 0.1343 4172 | 2/38
95 h-m-p 0.0932 0.5971 18.4239 YCC 43300.914844 2 0.0370 4216 | 2/38
96 h-m-p 0.1191 0.6641 5.7221 CC 43300.347337 1 0.0459 4259 | 2/38
97 h-m-p 0.0701 3.6070 3.7453 +YC 43299.276943 1 0.1759 4302 | 2/38
98 h-m-p 0.0613 1.0779 10.7493 YCC 43298.664763 2 0.0374 4346 | 2/38
99 h-m-p 0.2102 3.7178 1.9120 YC 43298.435840 1 0.1103 4388 | 2/38
100 h-m-p 0.0361 1.1572 5.8380 YC 43297.998781 1 0.0722 4430 | 2/38
101 h-m-p 0.3152 7.0400 1.3376 CC 43297.548039 1 0.4810 4473 | 2/38
102 h-m-p 0.7647 3.8233 0.7679 YC 43297.449947 1 0.3199 4515 | 2/38
103 h-m-p 0.3406 8.0000 0.7212 CC 43297.354753 1 0.4254 4594 | 2/38
104 h-m-p 1.6000 8.0000 0.1834 CC 43297.335293 1 0.6032 4673 | 2/38
105 h-m-p 0.8760 8.0000 0.1263 YC 43297.324310 1 0.6627 4751 | 2/38
106 h-m-p 0.9533 8.0000 0.0878 C 43297.318798 0 0.8473 4828 | 2/38
107 h-m-p 1.2887 8.0000 0.0577 C 43297.314375 0 1.2977 4905 | 2/38
108 h-m-p 1.2929 8.0000 0.0580 C 43297.313424 0 0.4724 4982 | 2/38
109 h-m-p 1.0674 8.0000 0.0256 C 43297.312302 0 1.0694 5059 | 2/38
110 h-m-p 1.6000 8.0000 0.0041 C 43297.312154 0 1.5776 5136 | 2/38
111 h-m-p 1.6000 8.0000 0.0009 C 43297.312140 0 1.8782 5213 | 2/38
112 h-m-p 1.6000 8.0000 0.0009 C 43297.312136 0 1.7778 5290 | 2/38
113 h-m-p 1.6000 8.0000 0.0002 C 43297.312135 0 1.4400 5367 | 2/38
114 h-m-p 1.6000 8.0000 0.0000 C 43297.312135 0 1.3406 5444 | 2/38
115 h-m-p 1.6000 8.0000 0.0000 C 43297.312135 0 1.6000 5521 | 2/38
116 h-m-p 1.6000 8.0000 0.0000 ---------------Y 43297.312135 0 0.0000 5613
Out..
lnL = -43297.312135
5614 lfun, 67368 eigenQcodon, 2037882 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -44004.105744 S = -43239.413487 -790.530067
Calculating f(w|X), posterior probabilities of site classes.
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did 1093 / 1093 patterns 3:13:16end of tree file.
Time used: 3:13:17
The loglikelihoods for models M1, M2, M7 and M8 are -44058.026466 -44058.026466 -43318.986989 -43297.312135 respectively
The loglikelihood for model M8 is significantly different from that for M7. Twice the difference is 43.349708
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus ---MFIVFLISYTTFLIPY-------------TATTTCFSGPTTENK-LNIS-------S
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus -----MLILFVFLPFITAD-----------------TCLNFTNLAAPAYNIA------SS
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus -----MLILFVFLPFITAD-----------------TCLNFTNLAAPAYNIA------SS
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus MLRNKKFLSLFVFSVVLPCAY-----------SNTGTCSNTINRFMY-LKLGLPESVNDA
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus MLRNKKFLSLFVFSVVLPCAY-----------SNTGTCSSTINRFMY-LKLGLPESVNDA
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus ----MWAILLILPAVLA------RPSCI-KS-SVSLSSIEHNVTYQS-FVLS--------
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus -MILSLLLLVIAVCVNNNYAWLGLQRNAIPPSNQDGECGGDPGKLPN-LNLGLPPN-KTV
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus ----MLFLAVYAAELLVLITQIPAVFSYG---GERFTCSPNYASLPN-LNLGLPPN-STV
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus ----MLSLAVYFAELLVIISYLPDLVT-----GDLNGCADGHNRLPN-LNLGLPPN-STV
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus ----MLSLAIYIAEILAFLQ-LPDLTTGAP--NKDGDCGDGYNRLPN-LNLGLPPN-STV
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus ----MLLTVVLSLALIACDASATRPECFANS-NFQLYPRNHTVNITS-LSVN--------
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus ----MVVLLFVMFSLVVAD----RPNCYLP--QYSYTISPATITNTSYFNVN--------
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus ----MVVLLFAILSIALAD----RPLCTINTGNYVLNPIQANITYTVVNSIN--------
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus ----MTRLMCLLMSLLIFVRGCEAQFVDMSPASNNSECLDSQVDAAAFSKLMWPYPIDPS
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus ---MFIVFLISYTTFLIPY-------------TATTTCFSGPTIENK-LNIS-------S
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus ----MKILIFAFLVTLV---------------KAQEGCGVINLKTQPTLTQV------SS
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus -MTYSVSLLMCLLTFIGAN----AKIVSIPGGVGTGACPQVDMQPSYFIKHNWPEPIDMN
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus ----MTHLMFLLMFLLTPI----RGDVDLGPDSTRDTCDEVVVQVSA-FQKDWPQPINPL
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus GSRGVY-YPDDIFR---------S-NVSVLVTGRFLRFNTTLTWYN------S---WN--
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus SRRGVY-YPDDIFR---------S-DFLHLVNDYFLPFGSNVTQFY------T---QG--
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus SRRGVY-YPDDIFR---------S-DFLHLVNDYFLPFGSNVTQFY------T---QG--
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus YVSGYLPVRDNWTCS------AGF-WQYYNAHAIFMSYYSTAMDFAIGVGSSKSYN----
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus YVSGYLPVRDNWTCS------AGF-WQYYNAHAIFMSYYSTAMDFAIGVGSSKSYN----
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus -KVSCL-LPDPFIA----------YSGQTLKQSIYYADTTNVTVYPVTPYKKD--SKA--
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus FVSGYLPLHKGWVCPTHPLGGGGYGTTFNDIHAIYWSYHSTANAVELAVSSGNGSVTR--
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus LVSGYLPRPGDWVC------YTGT-TTHDNIRGVFWSYYSHGSAVAIGISNKDQTTTP--
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus FVSGYLPRKNGWECPTINNQYGGS-TNYENVHGIFWSYHSTAQRFELGVSNKDQLVNT--
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus FVSGYLPQKTGWVCP--ENKEAGA-TSYEGVHGVFWSYYATGQDVEIGVSNFRQLNNT--
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus -VANLL-LPDPYIA----------YSGQTLRQNLFMADLSRTIIYPITPPAKDS-TGG--
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus -PISIV-VPEFSVA----------RTNLVVRQRLQVAAYD-FTKIPITPPHRS-------
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus -PVSLV-VPEFSIA----------RTNLVVRQRLYVA-ATNFTRIPITPPGRA-------
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus KVDGII-YPVGRTY----------SNITLSYTGLFPLQGDLGTQYLYSVSHAVGHDGDPT
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus GSRGVY-YPDDIFR---------S-NVSVLVTGRFLRFNTTLTWYN------S---WN--
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus SRRGVY-YNDDIFR---------S-DVLHLTQDYFLPFHSNLTQYFSLNIESD---KI--
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus KADGVI-YPNGRTY----------SNITLQTTNLFPRNGDLGTQYVYSASNEKSRTSNVA
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus FADGII-YPTGRSY----------SNISLSYQGLFPRQGDLGRQYIYSVTHAGDSTLYPP
.
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus --------QAYSSPVLPFGHG--VYFST--IDKSNVVRGW--------------IFGTTL
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus --------TNIDNPTLPFRDG--VYFAA--TEKSNIVRGW--------------IFGSTL
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus --------TNIDNPTLPFRDG--VYFAA--TEKSNIVRGW--------------IFGSTL
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus --------TKWGLYFWQKNNGYRAVFRICKW-DSKIEPSFQPSNQQARECLINKEFYMGF
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus --------TKWGLYFWQKNNGYRAVFRICKW-DSKIEPSFKPSNQQARECLINKEFYMGF
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus --------TMYNTTQVLVGNG--LFVHTYMYREQDSSTY--------CQEPFGVVFGTTF
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus --------D-WSLYVHHSNNQGYMYFKICRW-GAVYPLNLSPNHNRG-DCLVNRKFNFRF
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus --------DQWALFAHHSNNGGQFYLRICKWLNGG-NLDWATESSRG-LCIVNRKFRFQF
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus --------NRWALYVYQNNNEGVLKLRICKWLRGQYSLQWLHGARHG-QCAVDRAFNFRF
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus --------NRWALYVHQKNNDHVLHFRICKWLAGTYTPQSRPWSRYG-QCAVDKRISFTF
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus --------YIYNTTILPVASG--LFVHTWMYRQESTSRTY-------CQEPFGVAFGDTF
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus ---------IFNNTYFRVGDG--ILVNTHMYHRTNIATNLG-SSFYGCQEPFGAAFGNTF
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus --------VIFNNTYFDAEDG--FFVNTHMYHTNNIATSPNKPNFYGCQEPFGVAFGNTF
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus TAYI----SNYSLLVNAFDNGFVVRIGAAANSTGTIVISPSVQTKIKKAYP-AFILGSSL
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus --------QAYSSPVLPFGHG--VYFST--IDKSNVVRGW--------------IFGTTL
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus --------VYFDNPILKFGDG--VYFAA--TEKSNVIRGW--------------VFGSTF
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus FI------SNYSYYGNPFGDGIVIRIGQNSNKTGSVIVGTAQTTIKKIYPA--LMLGSSF
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus QGIGKHFISNYSAETLPFGNGFVVRIGFSANKTGSLVISPTTSKVIKKIYP-AFMLGTAV
. : .
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus DNTTQSA---------LLV-------------NNGSAITIEVC-YFQFCDNPAFIISGGA
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus DSTSQSA---------IIL-------------NNSTNLIVRVC-NFELCKVPLFVVFKSN
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus DSTSQSA---------IIL-------------NNSTNLIVRVC-NFELCKVPLFVVFKSN
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus GHAKNQIFGVSWSGNRVTLHTLDKVVSFFVEGADAWDYASYRCANGYSCA--HQVVYTPV
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus GHALNQIFGVSWSGNRVTLHTLDKVVSFFVEGADTWDYASYRCANGYSCA--HQVVYTPV
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus EQDRIAI---------IMIVPGNLGSWPTVSKPTTIKVYIIVGSNATICAYPAFNRWGPA
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus LHGANQVLGVTWSSNYVTLYGLNNTYRFYL--HNNWERATVRCHTKQSCA--FFPVENVT
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus SHAAGQVIGVTWSSNVVTFYG-SRSYRYYL--TNNWNRVDVKCVNYPTCI--INPVRNIT
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus VHAENQVLGVTWSSNYVTFYGINGSYRYYI--PNDWFRVSVKCENKYVCA--IYPVYNQT
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus EHQGNQVLGVTWSSNYVTFYGISKSYRYFL--KNDWYRVTVKCLNKYACA--LYPVYNQT
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus IQDRIAI---------VIIAPDNLGSWNQVSYRNVTTVHLVVCSNATLCINPGFNRWGPA
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus VNEPITL---------VMFYAGNVGSWSSLVTQQQANITIVSCDNATLCANPFFLRWGPG
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus ENEPITL---------VMVYAGNIGSWTNTVTQTSANITIVSCDNATLCSNPLYLRWGPG
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus TNTSAGL--PLYANYSLTIIPDGCGTVLHAFYCILQPRTQNRCPGNGGYK--AYFVYETI
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus DNTTQSA---------LLV-------------NNGSAITIEVC-YFQFCDNPAFIISGGA
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus DNTTQSA---------IIV-------------NNSTHIIIRVC-YFNLCKDPMYTVSAGT
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus GNFSVNNKSGAYFNHTLLILPSKCGTVFQVAYCLLQPRTDSYCPGNANYV--SYALIDSP
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus TSFAHGH-AGRYLNHTLVILPESCGTSLTVFYCILEPRNGTRCPNHQDYT--SYVIWETP
: .
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus QTN-TAIYINLRN--CTYVDTLRDLPL-SFAEVDGGFKHLREFVFKNSDGFLHIYGAYQ-
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus NSQLSHLFSDSFN--CTFEYVSRAFSL-DIREQSGNFVDLREFVFRNRNGFLHIYEGYE-
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus NSQLSHLFSDSFN--CTFEYVSRAFSL-DIREQSGNFVDLREFVFRNRNGFLHIYEGYE-
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus TLRITTVPEGIRS-YDLCTNCSGFPEH-VFAVLDGGEIPP-NFDFTN---WFYLTNASS-
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus TLRITTVPQGIRS-YDLCTNCSGFPEH-VFAVLDGGEIPP-NFDFTN---WFYLTNASS-
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus G---QFYADDAFV--NHGDSCFVNNTF-EIPLNTSRI----NLAFRFNDGNLLLYHSRW-
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus TLNITTNGEGLIESYDVCADCGGFPVH-VFPVLEHGYIPN-DFSFSN---WFMLSNTST-
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus TFNVTTNAQGLFQSYTVCDDCNGFPQH-VFAVLDGGYIPS-EFGLDN---WYVLSNTST-
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus TLNITTNAKGLIKEYSVCESCNGFPAH-VFPVLEGGKIPA-DFDFTN---WFYLSNTST-
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus TLNITTNARGLIQSYSVCDSCNGFPAH-VFPVLEGGKIPA-DFDFTN---WFYLTNSST-
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus G---NIIASNALV--DHSNSCFVNNSF-NVSISTSRI----NLAFLFKDGDLLIYHSNW-
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus VIR-SFTISNAFQ--CHGNYTFYDTKLVNFTVSTARY----NLAFTFADGDIFMY--YA-
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus GLP-GYVIKDAFH--CHGDYTFYDSKIINFSVDSSRY----NFAFSFADGDIFMY--YA-
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus HNDCVPAINK--N------ASLNSFKT-FFDLVNCTFFDSWDITADEVKEWFGITQDTQG
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus QTN-TAIYINLRN--CTYVDTLRDLPL-SFEDVDGGFKHLREFVFKNSDGFLHIYGAYQ-
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus QVS-SWVYQSAFN--CTYDRVKKSFQL-DTSPKTGNFTDLREFVFKNRDGFFTVYQTYT-
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus T-DCTSADESKRR------NGLEDIKK-YFNLVNCTYFEEFNVTADERAEWFGITQDSQG
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus HLDCGSSVNR--N------ATLNSFKV-SFNLRQCKFMRTYNISDDENQEWFGITQNAQG
:. :
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus --PHDLDIGAPAALPAQFLPLKPLWKLPLGLNITNYKVV----TTLKP----------TN
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus --AISIVRGLPAGFNV----LKPLLKIPFGLNVTSFKTF----LTVYR------VAAGSI
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus --AISIVRGLPAGFNV----LKPLLKIPFGLNVTSFKTF----LTVYR------VAAGSI
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus --PVSGRVVGVQPLQ-----LLCLWPIPALLGTATDITFDRNGTSDVRCNGFSSNATADA
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus --PVSGRVVGVQPLQ-----LLCLWPIPALLGTATDITFDRNGTSDVRCNGFSSNATADA
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus --LPTSGLNLLEDTP-----LHFYMSVGVGANLPNAQFF----QSLSR--SLDGSGDGKC
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus --FLQGKLVSTQPLK-----LMCLWPVPSLLANDEKIFFN---ASGATCNGYQFDGVADA
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus --VLDGRVLTNQPLL-----VACLWPVPSLLSNDNPIHFNMSLNTGVNCNGYSEVREVSH
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus --LVAGRVVGIQPLR-----LLCLWPVPSTTANDDKIYFN---TTGANCNGFVGEGVADA
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus --LVAGRVVGIQPLK-----LLCLWPVPSITANDDKIYFN---TTGANCNGFVGEGVADA
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus --LPKGSFDFNQSFP-----LQYFMTLPVGGNLPRAQFF----QSIVRQGGTNNGADDRC
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus --ALGDSLNLPTAYP-----LQPYLRIPAGFKPDVVQFF----QAITRP--NGESAEVAC
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus --PLGDSQNVAKAFP-----LQPYLRIPAGFKPKRAQFF----QAIIRK--TAEDAEFQC
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus VHLYSSRKGDLYGGN-----MFRFATLPV---YDAIKYY----TVIPR----SFRAKANR
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus --PYDLAIGATAALPAQFLPLKPLWKLPLGLNITNYKVV----TTLKP----------TN
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus --PVNLLRGLPSGLSV----LKPILKLPFGINITSFRVV----MAMFS------KTTSNY
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus VHLYTSRKNGFNSNN-----LFLFASVPI---YDKINYY----TVIPR----SIITPANQ
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus VHLYSSRKGDLYGGN-----MFLFDTLPV---YETLKYY----TVIPR----SLRSRLNE
: :
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus QAFQAAYIVGNLKHTTMMLSFNENG-----TMSNAID-------CSQDPLAELKCTLKQF
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus SVASSAYFVGYLKPLTFMLSYDLNG-----TINNAVD-------CSQDPLAELKCTIKNF
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus SVASSAYFVGYLKPLTFMLSYDLNG-----TINNAVD-------CSQDPLAELKCTIKNF
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus MRFSLNFTENGVFAKEGVITLKTVSNTFKFSCSNSSTYTSPY-VIPFGHIDQPYYCFTTF
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus MRFSLNFTENGVFAKEGVITLKTVSNTFKFSCSNSSTYTRPY-VIPFGHIDQPYYCFTTF
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus FSAQNNLYIAPIVQRELLVAYSDAG-----IPTKVAD-------CSLNAGEELFCVTGTF
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus IRFSLNFSSDQVFNGVNNIVFDVEGGTFEFFCTNDTSVNPTYRYVPFGQLTEIYRCFVET
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus LRFALNFTNQQVLNGVHNIDLLGDTFNFTFTCTNNSDITKGERFVPFGFLDNVYRCFVYF
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus LRFSLNFTSNQVLNGVHNIILESTSSKFTFTCRNDSESTFYR--VPFGETGQVYYCFIFT
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus LRFSLNFTANQILNGVHNIILEGTEAKFTFTCRNDSESTLFR--VPFGVTGQVYYCFVFT
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus VDFNISLHIAHLVNRDLLVSYFNNG-----SVANAAD-------CAESASEELYCVTGSF
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus ASSTVSWYVSRLYYKELLVGYDSYS-----SIVNVSF-------CSSDAESELQCLLGTF
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus SRYTTSWYVSYLKYHELLVGYDANS-----IISNVST-------CSFDAESELQCLLGTF
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus RESWAAFYVYKLHQLTYLLDFSVDG-----YIRRTID-------CGHDDLSQLHCSYTSF
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus QAFQAAYIVGNLKHTTMMLSFNENG-----TMSNAID-------CSQDPLAELKCTLKQF
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus VPESAAYYVGNLKQSTFMLSFNQNG-----TIVDAVD-------CSQDPLAELKCTTKSF
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus RSAWAAFYVYPLHQLSYLLNFDVNG-----YITQAAD-------CGYNDYTQLVCSYGDF
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus RQAWAAFYVYSLHKLTYLLDFSVDG-----YVRRAID-------CGYDDVAQLFCSYESF
: : . :
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus ---DVGKGIYQTSNFRVQPTVDVARFPNITNVC--PFDKVFNATRFPSVYAWERTKISD-
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus ---NVSKGIYQTSNFRVSPTREVVRFPNITNRC--PFDSIFNASRFPSVYAWERTKISD-
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus ---NVSKGIYQTSNFRVSPTREVVRFPNITNRC--PFDSIFNASRFPSVYAWERTKISD-
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus YINETTGTTATSFVGMLPPIVREFVITRLGDVYLNGYRIFSVGEVVSVNFNISSTDHRDF
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus FTNETTGATATSFVGMLPPIVREFVITRLGDVYLNGYRIFSVGEVVSVNFNISSTDHRDF
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus ---DPPTGVYPLSRYRAQLS-GSVHITQQLSHCALPYKDILDPPQ-PVV--WKRYTVAN-
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus ---TAENGTHTTFVGILPPVVREIVVSRLGAIYINGYRLISLPVIESIVFNVTSKVGSDF
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus ---DVGNGTVNKFVGILPPVVKEIVISKFGTVYINGVNMATLPPVNSVIFNVTSTVGSDF
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus ---EAGNQSYNTFVGILPPVLKEIVISRYGSIYLNGVKLFSLPTLESVIFNVSSNVGSDF
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus ---ESRNQSYNTFVGILPPILKEIVISRYGSIYLNGVKLFSLPVLQSVIFNVSSKVGSDF
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus ---QPPTGVYPLSRYRAQVD-GFVRVTQRGDYCQPPYADLLEPPQ-PVV--WRRFMLYN-
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus ---APANGVYSLSNFRSSPT-DNVRITNSASSCSVPYSVLSRPPL-PFV--WKRYAISN-
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus ---TPANGVYSLSNFRSSPV-DTVRITNSAKACSVPYNLLETPPL-PFV--WKRHSISN-
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus ---EVDTGVYSVSSYEASAT-GTFIEQPNATEC--DFSPMLKGVA-PQVYNFKRLVFSN-
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus ---DVGKGIYQTSNFRVQPTVDVARFPNITNVC--PFDKVFNATRFPSVYAWERTKISD-
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus ---NVSKGIYQTSNFRVSPVTEVVRFPNITNLC--PFDKVFNATRFPSVYAWERTKISD-
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus ---NMKSGVYSTSYYSAKPV-GAYYEAHVYPDC--NFTDLFRENA-PTIMQYKRQVFTR-
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus ---DVDSGVYSVSSFEAQPR-GYFVEQPHSSEC--DFSAMFSSQP-PQVYNFSRLVFTN-
.
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus ----------------CVADYTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRF
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus ----------------CVADYTVLYNSTSFSTFKCYGVSPSKLIDLCFTSVYADTFLIRF
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus ----------------CVADYTVLYNSTSFSTFKCYGVSPSKLIDLCFTSVYADTFLIRF
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus WTVAFVKDAEVMLDIEDTYIKQLLYCNNPVNVVKCQQLK-FVLEDGFYSYVPASEDSLPR
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus WTVAFVKNAEVMLDIEDTYIKQLLYCNNPVNVVKCQQLK-FVLEDGFYSYAPQSEDSLPR
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus ----------------CSFDFDVIVNNLPTYELKCYGVAPTRLAQMCYSGVTLDVMRINS
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus WTVAFAQDVEVLLELNATNIVDILYCESPINKLKCQQLT-FSLDDGFYPASSAYTEYTPR
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus WTVGFTDLADVMIDINATRIVDLLYCDTPINKLKCQQLS-FSLDDGFYTTTNVYKQAVPR
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus WTIAYAQDAQVMVDLNATSITDLLYCDTPLNRLKCQQLS-YALEDGFYPTTNIYTKDIPR
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus WTVAYAQDAQVMVDLNATSITDLLYCDTPLNRLKCQQLS-YALEDGFYPTTNIYTRDIPR
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus ----------------CAFDFSVVIDNLPTHQLQCYGISPKRLASMCYSSVTIDVMRINA
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus ----------------CKFDFQALLSHLPTFQLRCFGISPTKLATMCFGTVTLDIMLVNV
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus ----------------CKFDFQALLSHLPSFQLRCYGISPTKLSSMCFGTVSLDVMLVNV
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus ----------------CNYNLTKLLSLFAVDEFSCNGISPDAIARGCYSTLTVDYFAYPL
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus ----------------CVADYTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRF
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus ----------------CVADYTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRF
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus ----------------CNYNLTLLLSLVQVDEFVCDKITPEALATGCYSSLTVDWFAFPY
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus ----------------CNYNLTRLLSLFQVSEFSCHQVSPSALASGCYSSLTVDYFAYPL
. . * : : :
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus S------EVRQVAPGQTGVIADY-----------------------NYKLPDD---FIG-
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus S------EVRQVAPGETGVIADY-----------------------NYRLPDD---FTG-
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus S------EVRQVAPGETGVIADY-----------------------NYRLPDD---FTG-
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus TIVRLPRFMTHNFINVSVVVSFYFDDGKHDTPVGSDFYECATCAPKYYHVRFTDYWLDG-
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus TIVRLPRFMTHQHINISVVVSFYFDDGQADTPVGSDFYACATCAPKYYKMVFADVDWTGI
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus T------HFTNMLGNVPDVFSMY-----------------------NYVLPTD---FYG-
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus SYVALPYHATHTEVVLGVHLSLY-----------------------TKHSATL---NGG-
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus TYVALPYHATHSAINITAEVSVN-----------------------SNDDRFL---INGL
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus SYVALPYHATHAVLNITAYIGD------------------------KKDDRIQ---INGF
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus SYVALPYHATHMVLNITAYIGD------------------------KKDDRIQ---INGF
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus T------HLNNLLNRVPDSFSLY-----------------------NYAVPDN---FYG-
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus T------HYNNLLNDVPDDFSLY-----------------------NYQLPRN---FYG-
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus T------HYNNLLNDVPDDFSLY-----------------------NYQLPRN---FYG-
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus S------MKSYIRPGSAGNIPLY-----------------------NYKQSFA---NPT-
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus S------EVRQVAPGQTGVIADY-----------------------NYKLPDD---FIG-
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus S------EVRQVAPGQTGVIADY-----------------------NYKLPDD---FTG-
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus A------WKSYLAIGSADRIVRF-----------------------NYNQDYS---NPS-
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus S------MASYLRQGSTGPIAQF-----------------------NYKQDFT---NPT-
: .
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus ----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFERDLSSEENGV
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus ----------CVIAWNTANQ------DVGSYFYRSHRSTKLK-----PFERDLSSDENGV
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus ----------CVIAWNTANQ------DVGSYFYRSHRSTKLK-----PFERDLSSDENGV
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus ----SNHTNVCVNTASFTTRLFTDYFGT-SGAVRIEIEPGTC-----PFGFD---TLNNY
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus HGDILNVTGVCVNAASFTTKFRSSYLGADGVYVG--LEAGSC-----PFSFD---TLNNY
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus ----------CVHAYYINST-NKRYTVAYQRGYSKVITPGGR-----QPYND---YVRTL
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus ------NDTICVNTTQFTTVLNAS---VYTG-ARGDVVNVNC-----PFTWA---SLNDY
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus ------NGTFCVNTTQFTV--ITHFTQYTG--MRVAIENLDC-----PFTLD---SLNNF
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus ------NDSFCVNTTQFTTN----FVQTDSGIIKAELKNGDC-----PFTFD---SINNY
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus ------NDSFCVNTTQFTTN----FVQTDSGIIKAELKNGDC-----PFTFD---SINNY
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus ----------CLHAFYLNST-T-----AYAVANRFPIKPGGR-----QSNRD---YIATV
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus ----------CLHSYYLPND-T-----AFSYTVASRIRYPSW-----VHSITPGGRQPVG
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus ----------CLHSYYLPNS-T-----TFNYIVASRSQSPSW-----VYNISPGGRQPPS
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus ----------CRVMASVPANVTITKPEAYGYISKCSRLTGDYQHIETPLYINPG-EYSIC
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus ----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFERDLSSEENGV
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus ----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFERDLSSEENGV
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus ----------CRIHSKVNSSVGISYSGLYSYITNCNYGGFNKDDVVKPGGRASQPCVTGA
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus ----------CRILAAVPSNVTIPLPQSYMWLTQCYTNSPSN-----SHYVEAG-SYTPC
*
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus LTLST----YDFNQNVPL---------E-YQATRVV-----------------VLSFELL
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus RTLST----YDFNPYVPL---------D-YQATRVV-----------------VLSFELL
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus RTLST----YDFNPYVPL---------D-YQATRVV-----------------VLSFELL
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus LAFGS----LCFSTV-P----------NGGCTMNIVTQGPYGQ----PHTFA-VLYVSYT
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus LTFGS----LCFSTV-P----------NGGCTMNVVSKGPYGE----PHTFA-VLYVSYT
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus LNTPNE---IC------T---------R-ANCFGLV-----------------VISLNPA
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus LSFGT----ICFSFE-PL---------PGGCTMSIN-VVNLGY----YTPFA-TLYVGYT
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus LSFGS----ICFSTY-AV---------GGGCRMRLD-KVLIST----PTPWR-ILNIVYT
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus LTFDS----ICFSIE-PI---------GGGCTMNIV-RTWFGQ----SVPWR-TLYVSYT
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus LTFDS----ICFSIE-PI---------GGGCTMNIV-RTWFGQ----SVPWR-TLYVSYT
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus LNAAH----YT------T---------F-SYIFGLA-----------------VITLKPA
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus PFLDS----LQSSSK-PC---------T-GSCLGLA-----------------VISLSIA
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus SFLNT----LPGSAK-PC---------Q-GSCLGLA-----------------VISLSVA
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus RDFAP----WGFSEDGQVFKRTLTQFEGGGLLVGVGTRVPMTA----NLEMGFVISVQYG
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus LTLST----YDFNQNVPL---------E-YQATRVV-----------------VLSFELL
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus RTLST----YDFNQYVPL---------E-YQATRVV-----------------VLSFELL
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus LNSPTNGQVWSFNFGGVP-----------YRTSRLTYTDHLKN----PLDMVYVITVKYE
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus LGLAS----RGFNTFNSM---------HYDPATGLTATGSYQYISEEALEMAFIISVQYG
: : .
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus NAPATVC---------GPKLSTPLVK--NQCVNFNFNGLKGTGVLTD-SSKTFQSFQQFG
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus NAPATVC---------GPKLSTELVK--NQCVNFNFNGLKGTGVLSS-SSKRFQSFQQFG
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus NAPATVC---------GPKLSTELVK--NQCVNFNFNGLKGTGVLSS-SSKRFQSFQQFG
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus DGDNIIGVPPSNIPAYGVADMSQVYL--DTCTTYTIYGMTGRGIITR-SNNTFITG-LYY
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus DGDNVIGVPPYNIPPYGVSDMSIVYF--DVCTTYTIYGMTGRGIITP-SNNTFITG-LYY
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus SGSHLVC---------PTNNDTDVVE--NQCVKYNFYGYSGNGVLTK-SNLTIPDNKLFV
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus RGHGITG---VSQKVGGIFDPSFITL--DTCTEYTVYGITGKGVITS-LNKTIVAG-LYY
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus DGDRTTG---VTKASGGIFDPSELYV--GVCTDYTIYGISGRGIINQ-LNTTIIAG-LYY
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus KGSRITG---VKTPNTGVFDPSTFVE--DVCTDYTIYGMSGRGVISR-SNASYIAG-LYY
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus KGSRITG---VKTPNTGVFDPSTFVE--DVCTDYTIYGMSGRGVISR-SNASYIAG-LYY
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus SGNKLVC---------PIANDTDIIT--ERCVQYSLYGYTGTGVLSKNTSLTVPNGKVFT
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus SANKLVC---------PVGNDTDIVP--DTCVNYNIYGYQGTGVISR-SNYTLPSSKVFS
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus SANKLVC---------PVGNDTDIVT--GNCVNYNIYGYQGTGVITT-SNYTLPSTKVFS
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus TDTNSVC------PMLDLGESSTITNRLGKCVDYSLYGVTGRGVFQN-CSAVGVKQQRFV
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus NAPATVC---------GPKLSTPLVK--NQCVNFNFNGLKGTGVLTD-SSKTFQSFQQFG
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus NAPATVC---------GPKLSTSLVK--NQCVNFNFNGFKGTGVLTD-SSKTFQSFQQFG
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus PGAETVC-----PKQVRPDYSTNITGLLGSCISYDIYGITGTGVFQL-CNATGIPQQKFV
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus TDSNSVC------PLQAVHNDTKVDDKLGRCIEYSLYGVTGRGVFQN-CTPVGLKQQRFV
: . * : . * * *:: . :
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus RDASDFTDSVRDPQTLQILDISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTIHA
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus RDASDFTDSVRDPQTLEILDITPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVPTAIRA
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus RDASDFTDSVRDPQTLEILDITPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVPTAIRA
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus TSNAGNLLAYKNSTTGIVYNIYPCQLAGQVAVI--SDN------IVGMASSTPNVSLDFN
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus TSLAGDLLAYKNSTNGIVYNVYPCQLSGQVAVI--SDN------IVGMASSTPNVSLDFN
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus ASNTGSIIAVK--AQDTVYSISPCVSVPVSVGY--DPNYEQ-ALLFNGLECNQRAVAVSI
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus TSTSGQLLGFKNSTTGEVFAVRPCDLASQVAVY--QND------IIGAMTASRNSSFGFA
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus TSPAGQLLGFKNATTGDIYGVRPCALSSQAAVY--QNE------IIGVMTASANESFGFQ
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus TAISGQLLGFKNATTGETFVVVPCDLSSQAAVI--GDK------VVGVMTSITNSSFEFV
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus TAISGQLLGFKNATTGETFVVVPCDLSSQAAVI--GDK------VVGVMTSITNSSFEFV
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus ASSTGAIIGVF--INGTMYSITPCVTVPVSVGY--HANFER-VLLFNGLSCSQRSRAVSR
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus LSSSGELTVFA--VGSSFYQLSPCAFAPISAAF--YKGYTT-SLLFNNLPCSNRHRAVVE
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus LSASGELTVFS--VGSSFYQLSPCAFAPISAAF--YKGYTT-SLLFNNLPCSGRSRAVVE
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus YDSFDNLVGYY-SDDGNYYCVRPCVSVPVSVIY--DKDTNLHATLFGSVACEHVTTMMSQ
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus RDASDFTDSVRDPQTLQILDISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTIHA
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus RDASDFTDSVRDPQTLRILDISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTLHA
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus YDKFDNIIGFH-SDDGNYYCVAPCVSVPVSVIY--DDNTNQYATLFGSVACQHISTMAAQ
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus YDGFDNLVGYH-SDNGNYYCVRPCVSVPVSVIY--DKATNNHATLFGSVACEHVDTMMSQ
. : ** . : .
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus DHLTHSWRVYTTGPHV---FQTQAGCLIGAEHVN--VSYQCDIPI----GAGICASYHTA
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus DQLTPAWRVYSTGVNV---FQTQAGCLIGAEHVN--ASYECDIPI----GAGICASYHTA
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus DQLTPAWRVYSTGVNV---FQTQAGCLIGAEHVN--ASYECDIPI----GAGICASYHTA
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus VTVVADSFYYLSNSAE-----------------------PCDQPVLTYAGIGICADGSIT
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus VTVVADSFYYLSNSAE-----------------------PCDQPVLTYAGIGICADGSIT
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus PASAY-WLRTVSDNQTAGVFDTPSGCVYNVINRTDITVNACDMPI----GNSLCLINATS
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus NVSELSNFYYHSNGHL-----------------------GCEEPVLIYGKMGICSDGSLT
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus NVTETPKFFYHSNGNS-----------------------TCTEPVLTYGSVGVCPDGTLI
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus KSIETPNFYYLTNATA-----------------------NCTSPVITYGKLGVCEDGSIA
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus KSIETPNFYYLTNATA-----------------------NCTSPVITYGKLGVCEDGSIA
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus PASTL-WNFSVSDESA---IDTLSGCVVNAILHNDTTVSTCSMPL----GNSLCLINDTT
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus PVSAY-WRRSVADNNT---FDTTAGCIFNAYNLTSIVVNQCDLPI----GDSYCLQPSLI
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus PVSDY-WRASVVNNST---FDTSAGCIFNAINSTSIVVNQCDLPI----GDSYCLQPSTI
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus FSRLTQSNLRRRDSNA--PLQTAVGCVVGLSNNSL-VVSDCRLPL----GQSLCAVPPVT
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus DHLTHSWRVYTTGPYV---FQTQAGCLIGAEHVN--ASYQCDIPI----GAGICASYHTA
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus DQLAPSWRVYTTGPYV---FQTQAGCLIGAEHVN--ASYQCDIPI----GAGICASYHTA
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus FSRETRASLVSRNMQN--LLQTSVGCVMGFHETND-TVEDCNLSL----GQSLCAIPPNT
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus FSRMTQSRLRVRNIDDAGPMQTSVGCVVGLVNTSL-IVDNCQLPL----GQSLCAVPATT
. * .: . *
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus SLLRSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTTEVMPVSMAKT
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus STLRSVGQ------KSIVAYTMSLGAENSIAYANNS-IAIPTNFSISVTTEVMPVSMAKT
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus STLRSVGQ------KSIVAYTMSLGAENSIAYANNS-IAIPTNFSISVTTEVMPVSMAKT
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus NNTARRAA-----------------SDPISPVISGN-ISVPTNFTFSVQVEYIQLMLKPV
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus NNTARRAA-----------------SDPISPVISGN-ISVPTNFTFSVQVEYIQLMLKPV
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus TQARATSGDDTKSYLSLVNYDPTY-TSLTKVLTPVYWVSIPTNFTLAAGTEYIQTTSPKI
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus EVNNKDAE-----------------QQPVSPIATAN-VTVPVNFTVSVQVEYLQMYMQPV
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus MVQTRSGN-----------------VNPVSPIVSGN-ITIPLNFTVSVQVEYLQMYLQPV
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus EVKVNTHV-----------------QTPVSPISTGN-ITVPSNFTVSVQVEYLQMYMRPV
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus EVKVNTHV-----------------QTPVSPISTGN-ITVPSNFTVSVQVEYLQMYMRPV
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus VAIAHAVG---LPKLYLVNYDPLYDNNSATPITPVYWVKIPTNFTLTATDEFIQTNAPKV
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus KGFEATLS--------LVTYNPL--ADSLTPITPVYQVSVPTNFTLVASTEYIQTYASKI
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus SRQGSTLL--------LVTYDPL--SDTLTPITPVYEISVPTNFTLVASTEYIQTYASKI
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus SFRRRSAS---EFQLAVLNYTSPIVVTPIN--SSGFTAAIPTNFSFSVTQEYVETSIQKV
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus SLLRSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTTEVMPVSMAKT
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus SLLWSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTTEVMPVSMAKT
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus NLRVGRST----FGLGSLAYNSPLRVDALN--SSEFKVSLPLNFTFGVTQEYIETSIQKI
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus IRAATGTT--SSLQLATINFTEPHMLTPIN--SSRFIVEIPTNFSFGVTQEFIQTTIQKV
:* **:. . * :
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus SVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQDKNTQEVFAQVKQMYKTP-T
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus SVDCTMYICGDSQECSNLLLQYGSFCTQLNRALTGVALEQDKNTQEVFAQVKQMYKTP-A
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus SVDCTMYICGDSQECSNLLLQYGSFCTQLNRALTGVALEQDKNTQEVFAQVKQMYKTP-A
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus TVDCSVYVCNGNPRCLQLLAQYASACRTIEQALQ-LSARLESVEVNSMISISQQALDLGV
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus TVDCSVYVCNGNPRCLQLLAQYASACRTIEQALQ-LSARLESVEVNSMISISQQALDLGV
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus NIDCAKYLCGDSDKCLTVLLQYGTFCDDVNKALAEVSSVIDSTMVSLVSELTADVVRS-E
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus SVDCNTYVCSGNVHCLRLLTQYASACRNIESSLQ-LSARLESLEVNSAITVSERAASLAN
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus SVDCNMYVCGGNPHCLRLMSQYASACRTIEESLQ-LGARLESTEVANTISVSSQAVQLAN
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus SVDCAMYVCNGNPHCLRLLTQYASACRTIEDALQ-LSARLESIEVNSVISVSEDALELAN
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus SVDCAMYVCNGNPHCLRLLTQYASACRTIEDALQ-LSARLESIEVNSVISVSEDALELAN
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus TIDCARYLCGDSSRCLNILLHYGTFCDDINKALAKVNTILDSALLSLSKELSINTRDEIQ
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus SIDCAKYLCGDSSQCRTVLLQYGTFCNDVNVALTRVFTLLDNSLVDTFSSLKSTAPVQ--
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus SIDCAKYLCGDSSQCRTVLLQYGTFCNDVNVALTRVFTLLDNSLVDTFSSLKSTAPAQ--
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus TVDCKQYVCNGFSRCEKLLVEYGQFCSKINQALHGANLRQDESVYSLYSNIKTTSTQT-L
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus SVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQDKNTQEVFAQVKQMYKTP-T
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus SVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQDKNTQEVFAQVKQMYKTP-T
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus TVDCKQYVCNGFAKCEKLLEQYGQFCSKINQALHGANLRQDDFVRNLFESVKTPQTVP-L
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus TVDCKQYVCNGFEKCEQLLREYGQFCAKINQALHGANLRQDESVSNLFSNIKTQATQP-L
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16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus IRDFGG-FNFSQIL----PDPLKPTKRSFIEDLLYNKVTLADAGFMKQ-YADCL---GGI
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus IKDFGG-FNFSQIL----PDPSKPTKRSFIEDLLFNKVTLADAGFMKQ-YGECL---GDI
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus IKDFGG-FNFSQIL----PDPSKPTKRSFIEDLLFNKVTLADAGFMKQ-YGECL---GDI
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus IDNFNHDFNLTNVL------PASVGGRSAVEDLLFDKVVTSGLGTVDADYKECAS-RTAN
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus IDNFNHDFNLTNVL------PANVGGRSAVEDLLFDKVVTSGLGTVDADYKECAS-RTAN
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus NTAFDTTYNFTSLMGCLGSSCNTRNYRSALSDLLYNKVKVADPGFMSS-YQKCIDSQWGG
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus ITNFEN-YNLSVLL------P-NLNGRSAMEDLLFNKVVTNGLGTVDQDYKQCIKDKGVG
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus ITNFDS-YNVSVLL------P-RANGRSFIEDLLFDKVVTSGLGTVDQDYKQCVNEWGIG
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus ISNFDH-YNMSALL------P-KKNGRSFIEDLLFNKVVTNGLGTVDQDYKKCMKDKGFG
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus ISNFDH-YNMSALL------P-KKNGRSFIEDLLFNKVVTNGLGTVDQDYKKCMKDKGFG
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus SFAFGGDYNFTGLMGCLGPNCGATTYRSALSDLLYDKVKITDPGFMQS-YQKCIDSQWGG
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus -LAYTGDFNFTSLVGCIGTDCDSKSHRSALSDLLFSKVSVADPGFMQS-YQQCLDAQWGG
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus -LAYTGDFNFTSLVGCVGTDCDSKSYRSALSDLLFNKVSVADPGFMQS-YQKCLDSQWGG
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus EYGLNGDFNLT-LLQVPQIGGSSSGYRSAIEDLLFDKVTIADPGYMQG-YDDCMK-QGPQ
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus IRDFGG-FNFSQIL----PDPLKPTKRSFIEDLLYNKVTLADAGFMKQ-YADCL---GGI
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus IRDFGG-FNFSQIL----PDPLKPTKRSFIEDLLYNKVTLADAGFMKQ-YADCL---GGI
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus TTGFGGEFNLT-LLEPLSVSTGSSNARSALEELLFDKVTIADPGYMQG-YDDCMQ-QGPA
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus DAGLTGDFNLT-LLQVPKVVTSQYSYRSAIEDLLFNKVTIADPGYMQG-YDECMK-QGPP
:*.: :: ** :.:**:.** . * :. * .*
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus NARDLICAQKFNGLTVLPPLLTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAY
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus SARDLICAQKFNGLTVLPPLLTDEMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAY
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus SARDLICAQKFNGLTVLPPLLTDEMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAY
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus TVAEVGCVQYYNGIMVLPGVVDQSLLAQYSAALTGAMVLGGITAAAA----VPFSIAVQS
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus WVAEVGCVQYYNGIMVLPGVVDQSLLAQYSAALTGAMVLGGITAAAA----VPFSIAVQS
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus SVRDLICTQNFNGISVLPPIVSPAMQSLYTSLLVGAVASAGYTFGITSVGVIPFATQLQF
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus DVADVACAQYYNGVMVLPGVVDDTKMSLYTASLVGGMVLAGFTAGAA----IPFSLAVQA
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus EVADLSCAQYYNGIMVLPGVVDANMMTLYTASLTGAMVFGGITASAS----IPFSLAVQS
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus EASDIACVQYYNGIMVLPGVVDDSKMALYTAALTGGMLLAAFTAGAS----IPFSLAVQS
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus EASDIACVQYYNGIMVLPGVVDDSKMALYTAALTGGMLLAAFTAGAS----IPFSLAVQS
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus SVRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAVASSGYTFGITSAGVIPFATQLQF
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus NIRDLLCTQTFNGISVLPPIVSPSMQALYTTALVGGIAASGFTFGVSSAAVIPFATQLQF
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus NIRDLLCTQTFNGISVLPPIVSPSMQALYTTALVGGIAASGFTFGVSSAAVIPFATQLQF
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus SARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFY
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus NARDLICAQKFNGLTVLPPLLTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAY
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus NARDLICAQKFNGLTVLPPLLTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAY
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus SARDLICAQYVAGYKVLPPLMDVNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSIFY
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus SARDLICAQFVAGYKVLPPLYDPNMESMYTTSLTGAILGAAWTAGASSFAAIPFAQSVFY
:: *.* * *** : : *:: * .. .. * . :**: :
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus RFNGIGVTQNVLYENQKQIANQFNKAITQIQESLT--------------TTATALGKLQD
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus RFNGIGVTQNVLYENQKQIANQFNKAISQIQESLT--------------TTSTALGKLQD
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus RFNGIGVTQNVLYENQKQIANQFNKAISQIQESLT--------------TTSTALGKLQD
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus RLNYLALQTDVLQRNQQQLANSFNAAMGNITEAFGRVNDAIEQTSHAISTVAQALDKVQN
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus RLNYLALQTDVLQRNQQQLANSFNAAMGNITDAFGRVNDAIEQTSHAVSTVAQALNKVQT
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus RLNGLGVTTQVLVQNQQLIANSFNNALTNIQKGFD--------------ATNLALSQMQS
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus RLNYVALQTDVLQRNQQILAESFNSALSNITEAFTEVNEAIKNTADAINTVATALGKVQS
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus RLNYVALQTDVLNRNQEILAQSFNSALGNITAAFSEVNHAFQETSDAINTVAQALGKVQT
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus RLNYVALQTDVLQKNQQILATSFNNAMSNITVAFTEVNQAIKETSDAINTVAKALGKVQS
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus RLNYVALQTDVLQKNQQILATSFNNAMSNITVAFTEVNQAIKETSDAINTVAKALGKVQS
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus RLNGIGVTTQVLVENQKLIASSFNNALVNIQKGFT--------------ETSIALSKMQD
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus RLNGLGVTTNVLMENQQLIANAFNKALVSIQEGFT--------------ATNQALNKIQT
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus RLNGLGVTTNVLMENQQLIANAFNKALVSIQEGFT--------------ATNQALNKIQT
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus RLNGVGITQQVLSENQKLIANKFNQALGAMQTGFT--------------TSNQAFSKVQD
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus RFNGIGVTQNVLYENQKQIANQFNKAITQIQESLT--------------TTATALGKLQD
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus RFNGIGVTQNVLYENQKQIANQFNKAITQIQESLT--------------TTSTALGKLQD
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus RLNGVGITQQVLSENQKIIANKFNQALGAMQTGFT--------------TTNEAFQKVQD
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus RMNGIGITQQVLSENQKQIANKFNQALGAMQTGFT--------------TTNLAFAKVQE
*:* :.: :** .**: :* ** *: : .: *: ::*
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus VVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQ
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus VVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQ
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus VVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQ
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus VVNDQGMALSQLTKQLASNFQAISSSIEDLYNRLDRVEADQQVDRLITGRLAALNAFVAQ
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus VVNDQGMALSQLTKQLASNFQAISSSIEDLYNRLDRVEADQQVDRLITGRLAALNAFVAQ
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus VINQHAQQLQTLVNQLGNSFGAISSSINEIFSRLDGLEANAQVDRIINGRTVVLNTYVTQ
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus VVNQQGEALAQLTKQLSSNFQAISSSIEDIYLRLDKLAADAQVDRLISGRLAGLNAFVTQ
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus VVNEQGQALSQLTRQLASNFQAISNSIEDIYNRLDGLTADAQVDRLITGRIGALNAFVAQ
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus VVNEQGQALSQLTRQLASNFQAISSSIEDIYNRLDSLAADAQVDRLITGRLGALNAFVTQ
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus VVNEQGQALSQLTRQLASNFQAISSSIEDIYNRLDSLAADAQVDRLITGRLGALNAFVTQ
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus VINQHAAQLQTLVTQLGNSFGAISSSINEIFSRLEGLAANAEVDRLINGRMMVLNTYVTQ
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus VVNNNALQLQVLVQQLGNTFGAISASVNEIFSRLDLLEANAEVDRLISGRMVVLNTYVTQ
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus VVNNNALQLQVLVQQLGNTFGAISASVNEIFSRLDLLEANAEVDRLISGRMVVLNTYVTQ
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus AVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLTSLNAFVSQ
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus VVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQ
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus VVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQ
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus AVNTNAQALAKLASELSNTFGAISSSIGDIIQRLDVLEQEVQIDRLINGRLTTLNAFVAQ
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus AVNANAQALSKLASELSNTFGAISSSISDILKRLDAVEQEAQIDRLINGRLTSLNAFVAQ
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16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus QLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPA
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus QLIRAAEIRASANLAATKMSECVLGQSKRVDFCGRGYHLMSFPQAAPHGVVFLHVTYVPS
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus QLIRAAEIRASANLAATKMSECVLGQSKRVDFCGRGYHLMSFPQAAPHGVVFLHVTYVPS
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus QLTKYTDVRASRQLAQEKINECVKSQSFRYGFCGNGTHVFSVVNAAPDGMMFFHSVLLPT
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus QLTKYTDVRASRQLAQEKINECVKSQSFRYGFCGNGTHVFSVVNAAPDGMMFFHSVLLPT
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus LLLKASEVRSQAALARQKISECVKAQSLRNDFCGNGTHVFSVPQLAPNGVMFIHYTYQPT
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus TLTKYTEVRASRQLALQKVNECVKSQSSRYGFCGNGTHLFSVVNAAPNGIMFFHTVLIPS
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus TLTKYTEVRASRQLAIQKINECVKSQSARFGFCGNGTHLFSIANAAPNGIMLFHTVLLPS
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus TLTRYTDARASRQLAIQKINECVKSQSMRYGFCGNGTHLFSIANAAPNGVMLFHTVLIPT
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus TLTRYTDARASRQLAIQKINECVKSQSMRYGFCGNGTHLFSIANAAPNGVMLFHTVLIPT
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus LLLQASEAKAQNALAVQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGVLFIHYAYTPT
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus LLIQASELRSQAELAKQKMSECVKSQSLRNDFCGNGTHVLSIPQLAPNGMLFIHYSYQPT
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus LLIQASELRSQAELAKQKMSECVKAQSTRNDFCGNGTHVFTIPQLAPNGMLFIHYSYQPT
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus QLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVANAPNGFYFFHVGYVPT
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus QLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPA
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus QLIRAAEIRTSANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPS
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus QLVRSESAARSAQLAKDKVNECVKSQSTRSGFCGQGTHIVSFVINAPNGLYFMHVGYHPS
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus QLVRSETAARSSQLAVDKVNECVKSQSKRNGFCGSGNHIVSFVSNAPNGLYFFHVGYVPT
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16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus QEKNFTTAPAICHEGK---AYFPREGVFVSNGS-------SWFITQRNFYSPQIITTDNT
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus QEKNFTTAPAICHEGK---AYFPREGVFVSNGT-------SWFITQRNFYSPQIITTDNT
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus QEKNFTTAPAICHEGK---AYFPREGVFVSNGT-------SWFITQRNFYSPQIITTDNT
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus AYMEVAAFSGLCVEGK-GFVLREVGNVLFEKDG-------RYFITARRMFEPRIPQTADF
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus AYMEVAAFSGLCVEGK-GFVLREVGNVLFEKDG-------SYLITARKMFEPRVPQTADF
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus AYALVQTAAGLCYNGT---GYAPLSGMFVLPND-TN----LWHYTKMNFYNPVNITFENT
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus SYTTVQAWAGVCVNGDVGLILRDVRNTLFYLDS-------KYYITTRDMYQPRTPVQSDF
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus EYTTVQAWAGICIDNNVGLILRDFKTTLFFSD--------KYYVTPRDMFEPRTPVQADF
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus EFVTVEAWSGVCVDGTHGLILRDVRTTLFQQGS-------TYYVTTRDMFEPRTPVAADF
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus EFVTVEAWSGVCVDGTHGLILRDVRTTLFQQGS-------TYYVTTRDMFEPRTPVAADF
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus DYALVQTSAGLCYNGT---GYAPLRGMFVLPNN-TN----MWHFTSMQFYNPVNISYSNT
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus KYAQVYTTAGLCFNGT---GFVPRDGLFVRENNESQ----VWYFTKASFYNPVNLSYENT
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus NYVQVYTTAGLCFNGT---GFVPRDGLFVRENNASQ----LWYFTKASFYNPVNLSYENT
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus NFTNVTAAYGLCNNNNPLLCIAPIDGYFITNQTTTYSIDTEWYYTGSSFFKPEPITQVNS
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus QEKNFTTAPAICHEGK---AYFPREGVFVSNGS-------SWFITQRNFYSPQIITTDNT
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus QERNFTTAPAICHEGK---AYFPREGVFVSNGS-------SWFITQRNFYSPQIITTDNT
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus QHIEVVAAYGLCDAANPTNCIAPVNGYFIKNQT-TRGVD-DWSYTGSSFYAPEPITTLNT
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus AHINATAAYGLCNTELPPRCIAPIDGYFVTNSSATRDADPEWYYTGSAFYNPEPITLANT
: .:* :. : * :: * :
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus FVAGSCDVVIGIINNTVYDPLQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVD
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus FVAGNCDVVIGIINNTVYDPLQPEL--DSFKEELDKYFKNHTSPDVDLGDISGINASVVN
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus FVAGNCDVVIGIINNTVYDPLQPEL--DSFKEELDKYFKNHTSPDVDLGDISGINASVVN
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus VQISGCDVVYLNVTRDELPTIIPDY--VDVNGTVEDILSKLPNRTSPELDLDIFNATYLN
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus VQISGCDVVYLNVTRDELPTIIPDY--VDVNGTVEDILSKLPNRTSPEFNLDIFNATYLN
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus QVLDSCAVNYSYVNYSVIEPTPPSS--YNFTEEFNKWYKNHSSYFNNTFNPGDFNFTGVN
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus VRISNCSVSYVNITSEQLGDIIPDY--LDVNKTLNDLQQSRPNYTVPDLGLDQYNTTILN
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus VRIANCSVNYLNISSSELGTIIPDY--IDVNKTLEELEQQRPNYTLPELDIDRFNNTYLN
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus VRIANCSVTYVNITADSLGEIIPDY--IDVNKTLEEL--GRPNFTLPDFNLDQFNNTYLN
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus VRIANCSVTYVNITADSLGEIIPDY--IDVNKTLEEL--GRPNFTLPDFNLDQFNNTYLN
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus QILTSCSINYTSVNYSVLQPSAPSD--YDFQKEFDKFYKNLSTSFNNTFNPNDFNFSMVD
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus HLLDTCGVNYTTVNNSVLNPIEPPN--YNFQEEFDKYFKNQSSQFNITFDSSQFNVSIVN
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus RLLDTCGVNYTTVNNTVLNPIEPPN--YDFQEEFDKYFKNQSSHFNITFDSSQFNVSIVN
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus RYVSS-DVKFEKLENNLPPPLLENSTDVDFKDELEEFFKNVTSHGPNFAEISKINTTLLD
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus FVAGSCDVVIGIINNTVYDPLQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVD
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus FVAGSCDVVIGIINNTVYDPLQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVD
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus RYVAP-QVTFQNISTNLPPPLLGNSTGTDFKDELDEFFKNVSTSIPNFGALTQINTTLLD
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus RYVSK-DTKYQELNNKLPPPLLSNQTDESFRDELEEFFKNVSSQGPNFQEISKINATLLD
: .. .:. .. * : ::
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus IQKEID--------------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus IQKEID--------------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus IQKEID--------------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus LTSEIADLTARSESLKNTTLELKELIANINATLVDLEWLNRVETYIKWPWWVWLIIVLVL
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus LTSEIADLTARSESLKNTTLELKELIANINATLVDLEWLNRVETYIKWPWWVWLIIVLVL
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus ISEQLA--------------TLTDVVNQLNKSFIDLKQMNVYEQTIKWPWYVWLAMIAGL
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus LTSEIAMLQNKSDSLIESTVKLHKLIEQLNQTYVDLEWLNRLESYVKWPWWVWLAILLAL
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus LSAEIAELQRKSESLQNSTIQLQELIERINSSYVDLELLKRIETYVKWPWYVWLAIILVM
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus LSAEIALLNAKSESLYNTTQRLEKSIENINNSYIDLELLNRLESYVKWPWYVWLAIFLAL
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus LSAEIALLNAKSESLYNTTQRLEKLIENINNSYIDLELLNRLESYVKWPWYVWLAIFLAL
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus VTAQIS--------------SLHQVVDQLNQSFIDLKKLNVYEKTIKWPWYIWLAMIAGI
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus LNEQMA--------------ALDSVVKSLNESFIDLKKLGVYTQQPNTPWYAWLGMIAGL
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus LNEQMA--------------ALDSVVKSLNESFIDLKKLGVYTQTIKWPWYAWLGMIAGL
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus LSDEMA--------------ILQEVVKQLNDSYIDLKELGNYTYYNKWPWYIWLGFIAGL
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus IQKEID--------------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus IQKEID--------------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGL
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus LSDEML--------------ALQQVVKALNESYIDLKELGNYTYYNKWPWYIWLGFIAGL
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus LSDEMK--------------VLNEVVKQLNESYIDLKELGNYTYYQKWPWYVWLGFIAGL
: :: * . :* : :**: : : **: ** :. :
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus VGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLHYT
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus IAIVMATILLCCMTSCCSCLKGAC-SCGSCC-KFDE-DDSEPVLKGVKLHYT
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus IAIVMATILLCCMTSCCSCLKGAC-SCGSCC-KFDE-DDSEPVLKGVKLHYT
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus ILFTCLMLFCCCSTGCCGIFSCLASSCGACCDIRGTKLQRYEAIE--KVHVQ
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus ILFTCLMLFCCCSTGCCGIFSCLASSCGACCDIRGTKLQRYEAFE--KVHVQ
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus VGLVLAVIMLLCMTNCCSCFKGLC-SCRHC--SYDEIEDVYPAVRVHNKRTE
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus IFTSFILLYCCCSTGCCGCTSCLA----DCRGQRLQ------RYEVEKVHIQ
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus SLFSFLMLYCCCMTGCCGCCSCLTSCCFDCRGKRLQ------QYEVEKVHIQ
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus ILFSFLMLYCCMATGCCGCCSCLSNSCFDCGGRRLQ------RYEVEKVHIQ
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus ILFSFLMLYCCMATGCCGCCSCLSNSCFDCGGRRLQ------RYEVEKVHIQ
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus VGLVLAVIMLMCMTNCCSCFKGMC-DCRRCCGSYDSYDDVYPAVRVNKKRTV
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus VGLALAVFMLCCMTNCCSGFRGIC-SCKQC--QYDDYADVYPAVRVSGKRTV
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus VGLALAVFMLCCMTNCCSGFRGIC-SCRQC--QYDDYADVYPAVRVSGKRTV
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus VALLLCVFFLLCCTGCGTSCLGKM-KCRNCCDSYED-------FDVEKIHVH
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus VGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLHYT
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus VGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLHYT
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus LALALCVFFILCCTGCGTSCLGKL-KCNRCCDKYEEYD-----LEPHKIHIH
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus VALALCVFFLLCCTGCGTNCMGKF-KCNRCCDSYDDYE-----VEPHKIHVH
: *.* * :
>16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus ---------ATGTTTATTGTATTTCTCATTAGTTACACAACTTTTCTCATTCCTTAC---------------------------------------ACAGCTACAACAACATGTTTCTCAGGGCCTACAACAGAGAATAAG---TTGAACATATCC---------------------TCAGGTAGTAGGGGTGTTTAT---TACCCTGATGACATTTTTCGT---------------------------TCC---AATGTTAGTGTGTTGGTGACAGGACGTTTCCTTCGCTTTAACACCACTCTTACGTGGTACAAT------------------TCA---------TGGAAC------------------------------CAGGCTTATTCTTCACCTGTCTTGCCTTTTGGGCATGGT------GTTTACTTTTCAACC------ATTGACAAATCTAATGTTGTCAGAGGTTGG------------------------------------------ATTTTTGGAACCACGTTAGATAACACCACTCAATCCGCA---------------------------TTGCTTGTG---------------------------------------AACAATGGTAGTGCTATTACAATAGAAGTCTGT---TACTTCCAATTTTGTGACAACCCTGCCTTTATAATTAGTGGCGGTGCACAAACAAAC---ACTGCTATCTATATCAACTTACGTAAT------TGTACATATGTGGACACACTACGTGACTTACCATTA---AGTTTTGCGGAGGTTGATGGTGGTTTTAAACACTTACGTGAGTTTGTATTCAAGAATAGTGATGGGTTTTTGCACATTTATGGTGCTTACCAG---------CCTCACGACTTAGACATAGGTGCTCCGGCTGCACTACCAGCTCAATTCCTGCCTTTAAAGCCCCTATGGAAACTGCCCCTCGGTTTAAATATTACCAATTATAAGGTTGTG------------ACAACTTTAAAACCC------------------------------ACAAATCAGGCCTTCCAAGCTGCTTATATAGTGGGTAACTTAAAACATACAACTATGATGTTGTCTTTTAATGAAAATGGC---------------ACTATGTCCAATGCTATTGAT---------------------TGCTCTCAGGACCCATTGGCTGAGCTAAAGTGCACACTCAAGCAGTTT---------GATGTAGGTAAAGGTATTTACCAAACGTCAAACTTCCGAGTTCAACCTACTGTTGATGTTGCGCGCTTTCCAAATATTACTAACGTGTGT------CCTTTTGACAAGGTTTTTAATGCTACACGCTTTCCTAGTGTCTATGCGTGGGAAAGAACAAAGATTTCTGAT---------------------------------------------------TGTGTTGCAGATTACACTGTTTTCTACAACTCAACTTCTTTTTCGACTTTCAACTGTTATGGAGTGTCTCCTTCTAAGTTGATTGATTTGTGTTTTACAAGTGTGTATGCAGATACATTTTTGATAAGATTTTCC------------------GAAGTCAGACAAGTAGCACCTGGTCAGACTGGTGTTATTGCAGACTAC---------------------------------------------------------------------AATTATAAACTACCTGACGAC---------TTTATAGGT---------------------------------TGTGTTATAGCTTGGAACACAGCCAAGCAA------------------GACGTCGGTAGCTATTTTTATAGGTCCCATCGTTCTAGCAAATTAAAA---------------CCCTTTGAAAGAGACCTTTCATCAGAAGAAAATGGTGTCCTTACACTTAGTACC------------TATGACTTTAATCAAAATGTACCTCTT---------------------------GAG---TACCAAGCCACTAGAGTCGTT---------------------------------------------------GTTCTTTCCTTTGAACTTCTTAATGCACCTGCTACAGTGTGT---------------------------GGACCAAAATTATCCACTCCATTGGTTAAG------AACCAGTGCGTCAACTTCAACTTTAATGGACTTAAAGGTACTGGTGTGTTGACTGAC---TCGTCTAAAACGTTTCAATCTTTCCAGCAGTTTGGTCGGGACGCATCTGATTTTACTGATTCTGTGCGTGACCCGCAAACTTTACAGATACTTGACATTTCACCGTGCTCTTTTGGTGGTGTAAGTGTCATAACACCAGGAACTAACACTTCATCTGCAGTGGCTGTTCTTTACCAAGATGTAAACTGCACTGATGTTCCCACAACAATACATGCAGATCACTTAACACACTCTTGGCGTGTTTATACCACTGGACCCCATGTT---------TTCCAAACACAAGCAGGGTGCCTTATAGGAGCTGAACATGTCAAC------GTATCCTATCAGTGTGACATTCCAATT------------GGTGCTGGCATTTGTGCTAGCTATCATACAGCCTCACTTTTACGGAGTACAGGTCAA------------------AAATCTATTGTGGCCTATACTATGTCATTAGGTGCTGAAAATTCTGTGGCATATGCTAATAATTCA---ATTGCCATACCTACTAATTTTTCTATTAGTGTCACTACTGAAGTGATGCCTGTTTCTATGGCTAAAACATCTGTCGATTGTACTATGTACATCTGTGGTGATTCTTTAGAGTGCAGTAACCTACTGCTTCAGTATGGTAGCTTCTGTACCCAACTCAATCGTGCCCTTTCTGGCATTGCTGTTGAACAGGACAAAAATACCCAAGAGGTGTTTGCCCAGGTTAAACAGATGTATAAAACACCA---ACCATAAGAGATTTTGGTGGT---TTTAATTTCTCTCAGATATTA------------CCAGACCCTTTGAAGCCTACTAAGCGTTCTTTTATAGAGGATTTGCTCTATAACAAAGTAACACTCGCGGATGCTGGTTTCATGAAACAG---TACGCAGACTGTTTG---------GGTGGTATTAACGCAAGAGATCTCATCTGTGCTCAAAAGTTTAATGGGCTGACAGTCTTACCACCTTTGCTCACTGATGACATGATTGCTGCCTATACTGCAGCGCTCATTAGTGGCACTGCCACTGCAGGCTGGACTTTCGGTGCAGGTGCAGCCCTTCAAATACCTTTTGCTATGCAAATGGCTTATAGGTTTAATGGCATTGGAGTTACTCAAAATGTTCTCTATGAGAACCAAAAACAAATTGCCAATCAGTTCAATAAGGCTATTACTCAAATTCAAGAATCACTCACA------------------------------------------ACTACAGCGACAGCGCTGGGCAAGCTGCAAGACGTAGTCAACCAGAATGCTCAAGCATTAAATACACTTGTCAAACAACTTAGCTCCAATTTTGGTGCTATTTCAAGTGCTTTGAATGATATCCTCTCACGACTTGACAAAGTTGAGGCAGAGGTGCAAATTGACAGGTTGATTACAGGCAGATTACAAAGCCTCCAAACCTATGTAACACAACAACTAATCAGAGCTGCTGAAATCAGGGCTTCTGCTAATCTTGCTGCTACCAAAATGTCTGAGTGTGTTCTTGGACAATCGAAAAGAGTTGATTTTTGTGGAAAAGGCTATCACCTTATGTCTTTCCCTCAATCCGCTCCACATGGTGTTGTGTTCTTACATGTCACTTATGTGCCAGCACAAGAAAAGAACTTCACTACTGCCCCAGCAATTTGTCATGAAGGCAAG---------GCGTACTTCCCTCGTGAAGGTGTGTTTGTATCTAATGGCAGT---------------------TCTTGGTTTATTACACAGAGGAATTTTTATTCGCCACAGATAATCACAACAGACAATACATTTGTAGCCGGAAGTTGTGACGTCGTCATTGGAATTATTAACAATACAGTTTATGATCCTCTGCAACCTGAGCTT------GACTCATTTAAACAAGAGCTAGACAAGTACTTCAAAAATCATACATCACCTGATGTTGATCTTGGCGACATTTCAGGCATCAATGCTTCTGTCGTCGATATTCAAAAAGAAATTGAC------------------------------------------CGCCTCAATGAGGTTGCCAAAAATTTAAATGAATCACTCATTGACCTTCAAGAACTTGGCAAATATGAGCAATATATTAAATGGCCTTGGTATGTCTGGCTTGGCTTTATAGCAGGGTTAGTAGGATTATTTATGGCCATCATTCTTCTTTGTTACTTTACTAGCTGCTGCAGCTGCTGTAAAGGCATGTGC---TCCTGTGGTTCTTGCTGC---AGATTTGATGAA---GACGACTCTGAGCCAGTGCTCAAAGGAGTCAAATTACATTATACA >Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus ---------------ATGTTAATTTTGTTTGTTTTTCTTCCTTTTATTACTGCAGAT---------------------------------------------------ACGTGTCTCAATTTTACTAATCTTGCAGCGCCTGCTTATAACATAGCC------------------TCCTCGTCTCGACGTGGTGTGTAT---TATCCTGATGACATTTTTCGG---------------------------TCT---GACTTTTTACATTTGGTAAATGATTATTTTCTGCCATTTGGTTCCAATGTAACTCAATTTTAT------------------ACT---------CAGGGT------------------------------ACTAATATTGATAACCCCACTTTGCCATTTAGAGATGGT------GTGTATTTTGCTGCC------ACAGAGAAGTCTAATATAGTTAGAGGCTGG------------------------------------------ATTTTTGGTTCTACTTTGGACTCCACCTCCCAGTCTGCT---------------------------ATAATTTTA---------------------------------------AATAATTCTACAAATTTGATTGTGCGGGTTTGT---AATTTTGAATTATGTAAAGTGCCACTATTTGTGGTTTTTAAATCTAATAATTCCCAGTTATCACACTTGTTTAGTGATAGTTTTAAT------TGTACCTTTGAGTATGTTTCTAGGGCTTTCTCTCTT---GATATACGCGAGCAGTCAGGTAATTTTGTGGATTTAAGAGAGTTTGTTTTTCGTAATAGGAATGGCTTCCTTCATATTTATGAGGGTTATGAG---------GCTATTTCTATAGTTAGAGGATTGCCTGCCGGGTTCAACGTC------------CTCAAGCCATTATTAAAGATACCATTTGGCCTTAATGTTACGTCTTTTAAGACTTTT------------CTTACAGTTTATAGG------------------GTGGCAGCAGGTAGTATTAGTGTAGCGAGCTCTGCTTATTTTGTAGGTTATTTAAAACCATTAACTTTCATGCTTAGTTATGATTTAAATGGT---------------ACTATTAATAATGCTGTTGAT---------------------TGTTCTCAGGATCCGCTCGCTGAGTTAAAGTGTACTATTAAGAATTTT---------AATGTTTCTAAAGGCATTTATCAGACTTCAAACTTCAGAGTGTCTCCAACTCGGGAGGTTGTTAGATTTCCTAATATTACAAATCGCTGT------CCTTTTGACAGCATCTTTAATGCTTCCAGATTTCCTTCTGTGTATGCGTGGGAAAGGACTAAAATTTCTGAT---------------------------------------------------TGTGTTGCGGATTATACTGTTCTCTACAACTCAACCTCATTTTCAACTTTTAAGTGTTATGGAGTTTCTCCCTCTAAGTTGATTGATTTATGCTTTACAAGTGTGTATGCTGATACATTCTTGATAAGATTTTCT------------------GAAGTCAGGCAAGTTGCACCGGGTGAAACTGGTGTTATTGCTGACTAT---------------------------------------------------------------------AATTATAGGCTACCTGATGAC---------TTCACAGGC---------------------------------TGTGTCATAGCTTGGAATACAGCTAATCAA------------------GATGTTGGTAGTTATTTTTATAGATCTCATCGCTCCACCAAATTAAAG---------------CCATTTGAGCGTGATCTTTCTTCTGACGAGAATGGTGTTCGTACACTTAGTACA------------TATGACTTCAACCCTTATGTACCTCTT---------------------------GAT---TATCAAGCTACCAGAGTGGTA---------------------------------------------------GTGCTTTCATTTGAATTGCTGAATGCACCTGCTACAGTTTGT---------------------------GGACCTAAGTTGTCCACGGAACTAGTTAAG------AACCAATGTGTCAATTTCAATTTTAATGGACTCAAAGGTACTGGTGTCTTGAGTTCG---TCTTCAAAAAGATTCCAGTCGTTTCAGCAATTCGGTCGTGACGCTTCTGACTTTACGGATTCAGTGCGCGACCCACAGACATTAGAAATACTTGACATTACACCATGTTCTTTTGGTGGTGTGAGTGTAATAACACCTGGAACAAATGCTTCATCTGAAGTAGCTGTTCTTTATCAAGATGTAAATTGCACTGATGTCCCAACTGCCATACGTGCAGACCAATTAACACCAGCTTGGCGCGTTTACTCAACTGGAGTAAATGTA---------TTTCAAACACAAGCTGGCTGTCTTATTGGAGCTGAACATGTTAAC------GCTTCATATGAGTGTGACATTCCTATT------------GGTGCTGGCATTTGTGCTAGCTACCATACAGCTTCTACTCTACGTAGTGTAGGTCAG------------------AAATCCATTGTGGCTTACACTATGTCCTTGGGTGCAGAAAATTCTATTGCTTATGCTAATAATTCA---ATTGCCATACCTACAAATTTTTCAATCAGTGTCACAACTGAAGTGATGCCTGTTTCAATGGCTAAGACATCAGTAGATTGTACAATGTACATCTGTGGTGATTCTCAGGAGTGCAGTAACTTACTTCTCCAGTATGGAAGTTTTTGCACGCAATTAAATCGCGCTCTCACGGGCGTTGCCTTAGAACAGGACAAAAATACACAGGAGGTTTTTGCCCAGGTTAAACAAATGTACAAGACACCA---GCCATAAAGGATTTTGGCGGT---TTCAATTTTTCACAAATATTG------------CCTGATCCTTCAAAGCCAACAAAGAGATCATTTATTGAAGACCTACTCTTCAACAAGGTGACTCTTGCTGATGCTGGCTTTATGAAACAA---TATGGCGAATGCCTA---------GGCGATATTAGTGCTAGAGACCTCATTTGTGCTCAGAAGTTCAATGGACTTACTGTCCTGCCACCATTGCTCACAGATGAAATGATTGCTGCATACACTGCTGCCCTTGTCAGTGGTACTGCTACTGCTGGCTGGACATTCGGTGCTGGTGCTGCTCTTCAAATACCTTTTGCTATGCAAATGGCATATAGGTTCAATGGCATTGGAGTTACTCAAAATGTTCTCTATGAGAATCAAAAACAGATCGCCAATCAATTCAACAAGGCGATCAGTCAAATTCAAGAATCACTTACA------------------------------------------ACAACATCAACTGCATTGGGCAAGCTGCAAGACGTTGTCAACCAGAACGCTCAAGCATTGAACACACTTGTTAAACAGCTTAGCTCCAATTTTGGTGCAATTTCAAGTGTGCTAAATGACATTCTTTCACGACTAGACAAAGTTGAGGCGGAGGTGCAAATTGACAGGTTGATCACAGGCAGGTTGCAGAGCCTTCAAACCTATGTAACACAACAACTAATCAGAGCTGCTGAAATCAGAGCTTCTGCTAATCTTGCTGCTACTAAAATGTCTGAGTGTGTTCTTGGACAATCAAAAAGAGTTGACTTCTGTGGAAGAGGCTATCATCTTATGTCTTTTCCTCAGGCCGCTCCGCATGGTGTTGTTTTCTTACATGTCACATATGTGCCATCGCAGGAGAAAAACTTCACCACAGCTCCAGCAATTTGTCATGAAGGCAAA---------GCATACTTCCCGCGTGAAGGTGTTTTTGTATCTAATGGCACT---------------------TCTTGGTTCATTACACAGAGGAATTTTTACTCACCACAAATAATCACAACAGATAATACATTTGTTGCTGGAAACTGTGATGTCGTAATTGGCATCATTAACAACACAGTCTATGATCCTCTGCAACCTGAGCTT------GACTCATTTAAAGAAGAGCTGGACAAGTACTTCAAAAATCACACATCACCTGATGTTGATCTTGGCGACATTTCAGGCATTAATGCTTCCGTCGTCAATATTCAAAAAGAAATTGAC------------------------------------------CGCCTCAATGAGGTTGCCAAAAATCTAAATGAATCGCTCATTGACCTTCAAGAACTTGGTAAATATGAGCAATACATCAAATGGCCCTGGTACGTTTGGCTCGGCTTCATTGCTGGACTGATTGCTATCGTCATGGCCACTATACTGCTTTGTTGCATGACCAGCTGTTGCAGTTGCCTCAAGGGTGCATGC---TCGTGTGGTTCTTGCTGC---AAATTTGATGAG---GATGACTCTGAGCCTGTGCTCAAGGGAGTCAAATTACACTACACA >Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus ---------------ATGTTAATTTTGTTTGTTTTTCTTCCTTTTATTACTGCAGAT---------------------------------------------------ACGTGTCTCAATTTTACTAATCTTGCAGCGCCTGCTTATAACATAGCC------------------TCCTCGTCTCGACGTGGTGTGTAT---TATCCTGATGACATTTTTCGG---------------------------TCT---GACTTTTTACATTTGGTAAATGATTATTTTCTGCCATTTGGTTCCAATGTAACTCAATTTTAT------------------ACT---------CAGGGT------------------------------ACTAATATTGATAACCCCACTTTGCCATTTAGAGATGGT------GTGTATTTTGCTGCC------ACAGAGAAGTCTAATATAGTTAGAGGCTGG------------------------------------------ATTTTTGGTTCTACTTTGGACTCCACCTCCCAGTCTGCT---------------------------ATAATTTTA---------------------------------------AATAATTCTACAAATTTGATTGTGCGGGTTTGT---AATTTTGAATTATGTAAAGTGCCACTATTTGTGGTTTTTAAATCTAATAATTCCCAGTTATCACACTTGTTTAGTGATAGTTTTAAT------TGTACCTTTGAGTATGTTTCTAGGGCTTTCTCTCTT---GATATACGCGAGCAGTCAGGTAATTTTGTGGATTTAAGAGAGTTTGTTTTTCGTAATAGGAATGGCTTCCTTCATATTTATGAGGGTTATGAG---------GCTATTTCTATAGTTAGAGGATTGCCTGCCGGGTTCAACGTC------------CTCAAGCCATTATTAAAGATACCATTTGGCCTTAATGTTACGTCTTTTAAGACTTTT------------CTTACAGTTTATAGG------------------GTGGCAGCAGGTAGTATTAGTGTAGCGAGCTCTGCTTATTTTGTAGGTTATTTAAAACCATTAACTTTCATGCTTAGTTATGATTTAAATGGT---------------ACTATTAATAATGCTGTTGAT---------------------TGTTCTCAGGATCCGCTCGCTGAGTTAAAGTGTACTATTAAGAATTTT---------AATGTTTCTAAAGGCATTTATCAGACTTCAAACTTCAGAGTGTCTCCAACTCGGGAGGTTGTTAGATTTCCTAATATTACAAATCGCTGT------CCTTTTGACAGCATCTTTAATGCTTCCAGATTTCCTTCTGTGTATGCGTGGGAAAGGACTAAAATTTCTGAT---------------------------------------------------TGTGTTGCGGATTATACTGTTCTCTACAACTCAACCTCATTTTCAACTTTTAAGTGTTATGGAGTTTCTCCCTCTAAGTTGATTGATTTATGCTTTACAAGTGTGTATGCTGATACATTCTTGATAAGATTTTCT------------------GAAGTCAGGCAAGTTGCACCGGGTGAAACTGGTGTTATTGCTGACTAT---------------------------------------------------------------------AATTATAGGCTACCTGATGAC---------TTCACAGGC---------------------------------TGTGTCATAGCTTGGAATACAGCTAATCAA------------------GATGTTGGTAGTTATTTTTATAGATCTCATCGCTCCACCAAATTAAAG---------------CCATTTGAGCGTGATCTTTCTTCTGACGAGAATGGTGTTCGTACACTTAGTACA------------TATGACTTCAACCCTTATGTACCTCTT---------------------------GAT---TATCAAGCTACCAGAGTGGTA---------------------------------------------------GTGCTTTCATTTGAATTGCTGAATGCACCTGCTACAGTTTGT---------------------------GGACCTAAGTTGTCCACGGAACTAGTTAAG------AACCAATGTGTCAATTTCAATTTTAATGGACTCAAAGGTACTGGTGTCTTGAGTTCG---TCTTCAAAAAGATTCCAGTCGTTTCAGCAATTCGGTCGTGACGCTTCTGACTTTACGGATTCAGTGCGCGACCCACAGACATTAGAAATACTTGACATTACACCATGTTCTTTTGGTGGTGTGAGTGTAATAACACCTGGAACAAATGCTTCATCTGAAGTAGCTGTTCTTTATCAAGATGTAAATTGCACTGATGTCCCAACTGCCATACGTGCAGACCAATTAACACCAGCTTGGCGCGTTTACTCAACTGGAGTAAATGTA---------TTTCAAACACAAGCTGGCTGTCTTATTGGAGCTGAACATGTTAAC------GCTTCATATGAGTGTGACATTCCTATT------------GGTGCTGGCATTTGTGCTAGCTACCATACAGCTTCTACTCTACGTAGTGTAGGTCAG------------------AAATCCATTGTGGCTTACACTATGTCCTTGGGTGCAGAAAATTCTATTGCTTATGCTAATAATTCA---ATTGCCATACCTACAAATTTTTCAATCAGTGTCACAACTGAAGTGATGCCTGTTTCAATGGCTAAGACATCAGTAGATTGTACAATGTACATCTGTGGTGATTCTCAGGAGTGCAGTAACTTACTTCTCCAGTATGGAAGTTTTTGCACGCAATTAAATCGCGCTCTCACGGGCGTTGCCTTAGAACAGGACAAAAATACACAGGAGGTTTTTGCCCAGGTTAAACAAATGTACAAGACACCA---GCCATAAAGGATTTTGGCGGT---TTCAATTTTTCACAAATATTG------------CCTGATCCTTCAAAGCCAACAAAGAGATCATTTATTGAAGACCTACTCTTCAACAAGGTGACTCTTGCTGATGCTGGCTTTATGAAACAA---TATGGCGAATGCCTA---------GGCGATATTAGTGCTAGAGACCTCATTTGTGCTCAGAAGTTCAATGGACTTACTGTCCTGCCACCATTGCTCACAGATGAAATGATTGCTGCATACACTGCTGCCCTTGTCAGTGGTACTGCTACTGCTGGCTGGACATTCGGTGCTGGTGCTGCTCTTCAAATACCTTTTGCTATGCAAATGGCATATAGGTTCAATGGCATTGGAGTTACTCAAAATGTTCTCTATGAGAATCAAAAACAGATCGCCAATCAATTCAACAAGGCGATCAGTCAAATTCAAGAATCACTTACA------------------------------------------ACAACATCAACTGCATTGGGCAAGCTGCAAGACGTTGTCAACCAGAACGCTCAAGCATTGAACACACTTGTTAAACAGCTTAGCTCCAATTTTGGTGCAATTTCAAGTGTGCTAAATGACATTCTTTCACGACTAGACAAAGTTGAGGCGGAGGTGCAAATTGACAGGTTGATCACAGGCAGGTTGCAGAGCCTTCAAACCTATGTAACACAACAACTAATCAGAGCTGCTGAAATCAGAGCTTCTGCTAATCTTGCTGCTACTAAAATGTCTGAGTGTGTTCTTGGACAATCAAAAAGAGTTGACTTCTGTGGAAGAGGCTATCATCTTATGTCTTTTCCTCAGGCCGCTCCGCATGGTGTTGTTTTCTTACATGTCACATATGTGCCATCGCAGGAGAAAAACTTCACCACAGCTCCAGCAATTTGTCATGAAGGCAAA---------GCATACTTCCCGCGTGAAGGTGTTTTTGTATCTAATGGCACT---------------------TCTTGGTTCATTACACAGAGGAATTTTTACTCACCACAAATAATCACAACAGATAATACATTTGTTGCTGGAAACTGTGATGTCGTAATTGGCATCATTAACAACACAGTCTATGATCCTCTGCAACCTGAGCTT------GACTCATTTAAAGAAGAGCTGGACAAGTACTTCAAAAATCACACATCACCTGATGTTGATCTTGGCGACATTTCAGGCATTAATGCTTCCGTCGTCAATATTCAAAAAGAAATTGAC------------------------------------------CGCCTCAATGAGGTTGCCAAAAATCTAAATGAATCGCTCATTGACCTTCAAGAACTTGGTAAATATGAGCAATACATCAAATGGCCCTGGTACGTTTGGCTCGGCTTCATTGCTGGACTGATTGCTATCGTCATGGCCACTATACTGCTTTGTTGCATGACCAGCTGTTGCAGTTGCCTCAAGGGTGCATGC---TCGTGTGGTTCTTGCTGC---AAATTTGATGAG---GATGACTCTGAGCCTGTGCTCAAGGGAGTCAAATTACACTACACA >Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus ATGCTACGCAACAAGAAGTTTTTGTCCCTGTTTGTGTTTAGCGTGGTTTTACCATGTGCCTAT---------------------------------TCGAATACCGGCACATGTTCTAATACCATTAATAGGTTTATGTAT---CTTAAGCTCGGCTTGCCTGAGAGTGTTAATGATGCATATGTATCTGGCTATTTACCAGTACGCGATAATTGGACATGTTCT------------------GCCGGTTTT---TGGCAATATTATAATGCCCATGCCATATTTATGTCGTATTATTCTACTGCCATGGACTTCGCTATTGGTGTTGGTTCTTCAAAAAGTTATAAC------------------------------------ACAAAGTGGGGGTTGTATTTTTGGCAAAAGAATAATGGGTATCGTGCTGTTTTTAGAATTTGTAAGTGG---GATTCTAAAATTGAACCCTCGTTCCAACCTTCTAATCAGCAGGCCAGAGAATGCCTTATTAATAAGGAATTCTATATGGGCTTTGGGCATGCTAAAAACCAGATTTTTGGTGTTTCATGGTCCGGTAACAGGGTTACACTTCATACATTGGATAAGGTTGTTAGTTTCTTCGTCGAAGGTGCAGACGCGTGGGATTACGCTTCCTACAGGTGTGCTAATGGTTATTCATGCGCA------CACCAAGTTGTTTATACACCTGTGACGCTTAGAATTACAACAGTTCCAGAGGGTATACGTTCG---TATGACTTGTGCACCAATTGCTCTGGCTTTCCGGAGCAC---GTATTTGCAGTGCTAGATGGTGGTGAAATTCCTCCA---AACTTTGATTTTACGAAC---------TGGTTTTACCTCACCAATGCGTCATCT---------CCTGTATCAGGTCGCGTTGTTGGTGTTCAGCCGTTGCAG---------------TTACTTTGCCTTTGGCCTATCCCTGCTTTGCTTGGTACTGCCACGGATATTACTTTTGACAGAAATGGTACTAGCGATGTGCGCTGCAATGGGTTCTCATCCAATGCAACGGCGGATGCTATGAGATTTTCGCTTAATTTCACTGAGAATGGTGTTTTTGCGAAGGAAGGTGTTATAACACTTAAAACTGTTTCTAACACATTTAAATTCTCATGTAGCAACTCATCTACATACACTAGTCCATAT---GTCATACCTTTTGGTCACATTGACCAACCTTACTATTGCTTCACCACATTTTATATTAATGAGACAACAGGCACTACTGCGACTAGTTTTGTGGGTATGTTGCCACCTATAGTTAGAGAATTCGTCATCACCCGCCTTGGTGATGTTTATCTCAATGGTTATAGGATTTTCTCCGTTGGTGAAGTTGTTAGTGTAAATTTTAACATTAGTTCCACCGATCACCGTGATTTTTGGACGGTGGCATTTGTTAAGGATGCTGAAGTCATGTTGGACATTGAGGATACGTACATTAAACAACTTCTCTACTGTAACAACCCTGTTAATGTTGTTAAGTGTCAGCAGTTGAAG---TTTGTGCTTGAGGATGGCTTTTACTCTTACGTGCCTGCGTCAGAAGATAGTCTGCCTCGTACTATTGTGCGTTTGCCCCGTTTCATGACACATAATTTTATTAACGTCAGTGTTGTCGTTTCATTTTATTTTGATGATGGCAAACACGACACGCCTGTGGGTAGTGACTTTTATGAGTGTGCCACCTGTGCTCCTAAATACTACCATGTTCGGTTCACGGACTACTGGTTAGACGGT---------------AGTAACCATACTAACGTTTGTGTTAACACCGCTAGCTTCACTACTAGGCTTTTTACTGATTATTTCGGTACT---AGTGGTGCTGTTCGTATAGAAATTGAGCCAGGAACTTGC---------------CCTTTTGGCTTTGAC---------ACGCTCAATAATTATCTGGCCTTTGGCTCG------------TTATGTTTTTCTACAGTC---CCT------------------------------AATGGTGGCTGTACTATGAACATAGTTACACAAGGACCTTATGGCCAG------------CCACACACATTTGCT---GTTTTGTATGTGTCGTACACTGATGGTGACAACATCATAGGTGTGCCACCTTCTAACATCCCAGCATATGGTGTTGCCGACATGAGTCAAGTCTATTTG------GACACTTGTACCACGTACACTATTTATGGTATGACTGGCAGGGGTATTATTACTAGA---AGTAACAACACCTTTATAACTGGT---CTTTACTACACGTCCAATGCTGGCAATTTGTTGGCTTACAAAAATTCTACCACAGGTATTGTTTATAATATTTACCCATGTCAACTCGCAGGCCAAGTTGCTGTTATT------AGTGACAAC------------------ATTGTTGGTATGGCTTCCTCCACGCCCAATGTGTCGCTAGACTTTAATGTTACAGTCGTCGCAGATAGCTTCTACTACTTAAGTAATAGCGCTGAG---------------------------------------------------------------------CCATGTGACCAACCCGTGCTTACTTATGCTGGTATAGGCATTTGCGCTGACGGTAGCATTACTAATAACACAGCAAGACGTGCGGCT---------------------------------------------------TCAGATCCTATTAGTCCTGTAATTTCTGGTAAT---ATCTCTGTACCTACCAATTTCACATTTTCTGTGCAAGTTGAGTACATTCAGTTGATGCTTAAACCAGTAACCGTTGATTGTAGTGTCTATGTTTGTAATGGAAATCCACGCTGTTTGCAATTACTAGCACAGTATGCTAGTGCTTGCCGAACAATAGAACAAGCTTTGCAA---TTGAGTGCTAGGCTTGAATCTGTTGAGGTTAACAGTATGATCTCCATCTCACAACAGGCGCTCGATCTTGGTGTTATTGACAACTTTAACCATGATTTTAACCTGACTAACGTACTG------------------CCTGCAAGTGTTGGTGGTCGTTCAGCTGTTGAAGACTTGTTGTTTGATAAAGTTGTCACTTCAGGACTTGGTACTGTTGATGCTGACTATAAGGAGTGTGCCTCA---CGCACTGCTAATACTGTTGCTGAAGTTGGCTGTGTGCAGTACTATAATGGTATTATGGTGCTGCCAGGTGTAGTAGACCAGTCTCTGCTCGCCCAATATTCAGCTGCTTTAACAGGTGCTATGGTTTTGGGTGGTATAACTGCGGCTGCAGCT------------GTGCCATTCTCCATTGCGGTTCAGTCTCGTCTGAACTATCTTGCATTGCAGACTGATGTGTTGCAGCGTAACCAGCAGCAGTTGGCTAATTCCTTTAATGCAGCCATGGGTAATATTACAGAAGCTTTTGGGCGTGTTAATGACGCCATTGAGCAAACGTCACATGCTATTTCTACTGTTGCACAGGCATTGGACAAGGTGCAGAATGTAGTCAACGACCAAGGCATGGCTCTCTCTCAACTTACTAAACAGTTGGCTTCTAACTTTCAGGCTATCTCGTCTTCTATTGAGGACTTGTATAATAGACTTGATAGAGTTGAAGCAGACCAGCAGGTTGACAGACTTATCACAGGCCGTTTGGCAGCACTTAATGCCTTTGTTGCACAGCAGTTGACTAAGTACACGGATGTTCGCGCTTCTAGACAGTTAGCACAGGAGAAGATTAACGAGTGTGTTAAGTCGCAGTCCTTTAGATATGGTTTCTGTGGCAATGGAACACATGTCTTTTCAGTTGTCAATGCGGCACCTGATGGTATGATGTTCTTTCACTCAGTTTTGCTTCCCACTGCCTACATGGAGGTTGCAGCTTTTTCTGGACTTTGTGTTGAGGGTAAA---GGGTTTGTCTTGCGGGAAGTTGGTAATGTTCTATTTGAAAAGGATGGA---------------------CGCTACTTTATAACTGCTCGTAGGATGTTTGAACCACGTATCCCTCAGACTGCTGACTTTGTGCAAATCTCTGGCTGTGACGTTGTTTATCTTAATGTGACTCGGGACGAATTGCCCACTATTATACCAGATTAT------GTTGATGTGAATGGCACAGTCGAAGACATTCTCAGTAAGCTCCCTAACAGGACGTCTCCTGAGTTAGATCTCGACATCTTTAATGCCACATATCTTAATCTGACTAGTGAAATTGCAGATCTTACTGCACGTTCCGAGTCACTTAAAAATACTACTTTGGAATTGAAAGAGCTTATTGCTAATATTAATGCTACACTTGTTGACTTGGAATGGCTTAACAGAGTGGAGACTTATATCAAGTGGCCATGGTGGGTTTGGCTCATCATTGTGCTTGTCTTGATACTCTTCACATGTCTAATGCTATTCTGCTGTTGTTCAACTGGTTGTTGTGGCATTTTTAGCTGTTTGGCTAGTTCTTGCGGTGCTTGTTGTGATATTCGTGGAACTAAACTTCAGCGGTACGAAGCAATTGAA------AAGGTCCACGTACAA >Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus ATGCTACGCAACAAGAAGTTCTTGTCCCTGTTTGTGTTTAGCGTTGTGCTACCATGTGCCTAT---------------------------------TCAAACACCGGCACATGTTCCAGTACTATTAATAGATTTATGTAT---CTTAAGCTCGGCCTGCCTGAGAGTGTTAATGATGCATACGTATCTGGCTATTTACCAGTACGTGACAATTGGACATGTTCT------------------GCCGGTTTT---TGGCAATATTATAATGCCCATGCCATATTTATGTCTTATTATTCTACTGCCATGGACTTCGCTATTGGTGTTGGTTCTTCAAAAAGTTATAAC------------------------------------ACAAAGTGGGGCTTGTATTTTTGGCAAAAGAATAATGGATATCGCGCTGTTTTTAGAATTTGTAAGTGG---GATTCTAAAATTGAACCCTCTTTCAAACCTTCTAATCAGCAGGCCAGAGAATGCCTTATTAATAAGGAATTCTACATGGGCTTTGGGCATGCTCTAAACCAGATTTTTGGTGTTTCATGGTCTGGTAACAGGGTTACACTTCATACATTGGATAAGGTTGTTAGTTTCTTCGTCGAAGGTGCAGACACGTGGGATTATGCTTCCTACAGGTGTGCTAATGGTTATTCATGTGCA------CATCAAGTTGTTTACACACCTGTGACGCTGAGAATTACAACAGTCCCACAGGGTATACGTTCG---TATGACTTGTGCACCAATTGCTCTGGTTTTCCGGAGCAC---GTATTTGCAGTGCTAGATGGTGGTGAAATTCCTCCA---AACTTTGATTTTACGAAC---------TGGTTTTACCTCACCAATGCGTCATCT---------CCTGTATCAGGTCGCGTTGTTGGTGTTCAGCCGTTGCAG---------------TTGCTTTGCCTTTGGCCTATACCGGCTTTGCTTGGTACTGCTACGGATATTACTTTTGACAGAAATGGTACTAGTGATGTGCGATGCAATGGGTTTTCATCCAATGCAACGGCGGATGCTATGAGATTTTCGCTTAATTTCACTGAGAATGGTGTTTTTGCGAAGGAAGGTGTTATAACACTTAAAACTGTTTCTAACACATTTAAATTCTCATGTAGCAACTCATCTACATATACTAGGCCATAT---GTCATACCTTTTGGTCATATAGATCAACCATATTATTGCTTCACCACATTCTTTACTAATGAGACTACTGGCGCCACTGCTACTAGTTTCGTTGGTATGCTACCGCCTATAGTCAGAGAGTTTGTCATCACACGTCTTGGTGATGTTTATCTTAATGGCTACAGGATATTTTCAGTTGGTGAAGTTGTTAGTGTTAATTTTAATATCAGCTCCACTGACCATCGTGATTTTTGGACCGTGGCTTTTGTCAAAAATGCTGAGGTTATGCTTGATATCGAGGATACATATATCAAACAGCTTCTCTACTGTAACAACCCAGTTAATGTTGTTAAGTGTCAGCAGTTGAAG---TTTGTGCTTGAAGATGGGTTTTACTCGTATGCACCTCAGTCAGAAGACAGTTTGCCACGTACTATAGTCCGATTGCCACGTTTTATGACGCATCAGCATATTAATATTAGTGTTGTTGTGTCGTTTTATTTCGACGATGGTCAGGCTGACACACCTGTTGGTAGTGATTTCTATGCTTGTGCAACGTGTGCACCCAAGTATTACAAAATGGTCTTTGCAGATGTTGATTGGACTGGTATTCACGGTGACATTTTGAATGTTACCGGTGTCTGTGTCAATGCTGCAAGTTTTACGACCAAGTTTCGTAGTAGTTATTTGGGTGCTGATGGTGTTTATGTAGGG------CTCGAAGCTGGAAGTTGT---------------CCATTCAGCTTCGAT---------ACGCTCAACAATTATCTAACATTTGGTTCA------------CTCTGTTTTTCAACAGTT---CCA------------------------------AATGGTGGTTGCACTATGAATGTTGTTTCCAAAGGGCCATATGGTGAA------------CCACACACATTTGCT---GTTCTTTATGTGTCTTACACCGATGGCGATAATGTCATAGGTGTACCACCTTATAACATACCCCCATATGGTGTTTCTGACATGAGTATAGTCTATTTT------GATGTGTGTACTACTTACACTATTTATGGTATGACTGGTAGGGGTATTATAACACCT---AGTAATAACACTTTTATTACGGGT---TTATATTATACATCTCTTGCCGGTGACCTTTTGGCTTACAAAAATTCTACCAATGGTATTGTTTATAATGTTTACCCATGTCAACTTTCTGGTCAAGTTGCTGTTATT------AGTGACAAC------------------ATTGTTGGTATGGCGTCGTCCACACCCAATGTTTCACTAGATTTTAATGTTACAGTCGTCGCAGATAGCTTCTACTACTTAAGTAATAGCGCTGAG---------------------------------------------------------------------CCATGTGACCAACCCGTGCTCACTTATGCTGGTATAGGCATTTGCGCTGACGGTAGCATTACTAATAATACAGCAAGACGTGCTGCT---------------------------------------------------TCAGATCCTATTAGTCCTGTAATTTCTGGTAAC---ATCTCTGTGCCTACCAATTTCACATTTTCTGTGCAAGTTGAGTATATTCAGTTGATGCTTAAACCAGTAACCGTTGATTGTAGTGTCTATGTTTGTAATGGAAATCCACGCTGTTTGCAATTACTAGCACAGTATGCTAGTGCTTGCCGAACAATAGAACAAGCTTTGCAA---TTGAGTGCTAGGCTTGAATCTGTTGAGGTTAACAGTATGATCTCCATTTCACAACAGGCGCTCGATCTCGGTGTTATTGACAACTTCAACCATGACTTCAATTTGACTAATGTACTG------------------CCTGCTAATGTGGGTGGTCGTTCAGCTGTTGAAGACTTGTTGTTTGACAAAGTTGTCACTTCAGGACTTGGTACTGTTGATGCTGATTATAAGGAGTGTGCTTCA---CGCACGGCCAACTGGGTTGCTGAAGTTGGCTGTGTGCAGTACTATAATGGTATTATGGTGCTGCCAGGTGTAGTAGACCAGTCTCTGCTTGCTCAATACTCAGCTGCTTTAACAGGTGCTATGGTTTTGGGTGGTATAACTGCGGCTGCCGCT------------GTACCATTCTCCATTGCGGTTCAGTCTCGTCTGAACTATCTTGCATTGCAGACTGATGTGTTGCAGCGTAACCAGCAGCAGTTGGCTAACTCCTTTAATGCAGCCATGGGTAATATCACTGATGCTTTTGGTCGTGTTAACGACGCAATAGAGCAGACGTCACATGCTGTTTCTACAGTTGCACAGGCCTTGAACAAAGTGCAAACTGTTGTTAATGACCAGGGTATGGCTCTCTCTCAACTTACTAAGCAGCTAGCTTCTAACTTTCAGGCTATTTCGTCTTCTATTGAGGATTTGTATAATAGGCTTGACAGAGTTGAAGCTGACCAACAGGTTGACAGACTTATCACTGGCCGTTTAGCAGCATTAAATGCTTTTGTGGCACAGCAGCTGACTAAATATACTGATGTGCGCGCTTCTAGACAGTTGGCTCAGGAAAAGATAAATGAGTGTGTTAAATCACAGTCCTTTAGATATGGTTTCTGTGGTAATGGAACACATGTGTTCTCAGTTGTCAATGCGGCACCTGATGGTATGATGTTCTTTCACTCAGTTTTGCTTCCCACTGCTTACATGGAGGTTGCAGCATTCTCTGGACTTTGTGTGGAGGGCAAA---GGCTTTGTCTTGCGCGAAGTTGGTAATGTCCTATTTGAGAAGGATGGT---------------------AGCTACCTTATAACTGCTCGCAAGATGTTTGAGCCACGTGTGCCTCAGACTGCTGACTTTGTGCAAATCTCTGGCTGTGACGTCGTTTATCTTAATGTGACTCGGGACGAATTGCCCACTATTATACCAGATTAC------GTTGATGTGAATGGCACAGTTGAAGACATACTCAGTAAACTCCCTAACAGGACATCACCTGAGTTCAATCTCGACATCTTTAATGCCACATATCTGAATCTGACTAGTGAAATCGCAGATCTTACTGCACGTTCCGAGTCACTTAAAAATACTACTTTGGAATTGAAAGAGCTTATTGCTAATATTAATGCCACGCTTGTTGACTTGGAATGGCTTAATAGAGTGGAGACTTATATCAAGTGGCCATGGTGGGTGTGGCTCATCATTGTGCTTGTCTTGATACTCTTCACATGTCTAATGCTATTCTGTTGTTGTTCAACTGGTTGTTGTGGCATTTTTAGCTGTTTGGCTAGTTCTTGCGGTGCTTGTTGTGATATTCGTGGAACTAAACTTCAGCGGTACGAAGCATTTGAA------AAGGTCCACGTACAA >BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus ------------ATGTGGGCGATATTGTTAATATTGCCAGCAGTACTTGCA------------------CGTCCTAGTTGTATT---AAGTCT---AGTGTCTCTTTATCTTCTATTGAACACAATGTGACTTATCAGTCT---TTTGTTCTCAGT---------------------------AAAGTATCTTGTCTT---TTACCAGACCCTTTTATAGCT------------------------------TATTCTGGACAAACATTGAAGCAGAGCATTTATTATGCTGACACCACTAATGTGACTGTATATCCAGTCACGCCATATAAGAAAGAT------AGTAAAGCC------------------------------ACCATGTACAACACCACTCAGGTGTTAGTAGGCAATGGC------TTATTCGTTCACACATATATGTATAGAGAACAAGATTCTAGTACATAT------------------------TGTCAAGAACCATTTGGTGTAGTCTTCGGTACTACTTTTGAACAAGATCGTATTGCCATA---------------------------ATTATGATTGTTCCTGGCAACTTAGGATCTTGGCCTACTGTTAGTAAACCTACAACCATTAAGGTTTATATTATAGTGGGTAGCAATGCTACAATATGTGCATATCCAGCTTTTAATAGATGGGGTCCAGCTGGT---------CAATTTTATGCAGATGATGCATTTGTT------AACCACGGTGACTCCTGTTTTGTTAATAACACCTTT---GAAATCCCTCTTAATACATCTCGTATT------------AACTTGGCTTTCAGGTTTAATGACGGTAATTTACTTCTTTATCACTCTAGATGG---------CTTCCGACATCTGGCCTCAATCTTCTTGAAGACACTCCA---------------TTACATTTCTATATGAGTGTAGGTGTAGGTGCTAACCTACCTAACGCTCAATTCTTC------------CAGTCTTTAAGTAGA------TCGCTAGATGGTAGTGGTGATGGCAAATGTTTTTCTGCCCAGAATAACTTATATATAGCACCAATTGTTCAACGTGAGCTACTAGTAGCTTACAGTGATGCTGGT---------------ATACCTACTAAAGTTGCAGAT---------------------TGTTCACTAAATGCTGGTGAAGAACTCTTTTGTGTAACAGGCACGTTT---------GACCCACCTACTGGTGTTTATCCACTCAGTAGGTATCGTGCTCAATTGAGT---GGTTCAGTCCACATTACACAGCAGTTGTCTCATTGTGCATTGCCCTATAAGGACATTCTAGACCCACCACAA---CCTGTGGTC------TGGAAACGCTATACGGTTGCTAAT---------------------------------------------------TGTTCATTTGATTTTGATGTCATTGTGAACAATTTACCTACATATGAACTCAAATGTTATGGTGTCGCACCTACACGTTTAGCTCAGATGTGCTATTCAGGTGTGACTTTGGATGTGATGCGTATTAACAGCACG------------------CATTTTACAAATATGTTGGGTAATGTGCCTGATGTTTTTAGTATGTAT---------------------------------------------------------------------AATTATGTATTGCCCACAGAC---------TTTTATGGT---------------------------------TGTGTGCATGCATATTATATTAATAGTACT---AATAAGCGTTACACTGTTGCCTACCAACGTGGTTATTCTAAAGTAATCACACCAGGAGGTAGA---------------CAACCGTATAATGAC---------TATGTACGCACACTTCTTAACACTCCTAATGAA---------ATCTGC------------------ACA---------------------------AGA---GCTAATTGTTTTGGCTTAGTA---------------------------------------------------GTTATCAGTCTTAATCCAGCATCAGGTAGTCACTTGGTGTGT---------------------------CCTACTAATAATGACACAGATGTTGTAGAA------AATCAGTGTGTAAAGTATAACTTTTATGGTTATTCTGGTAATGGTGTTTTGACTAAG---TCTAATCTTACTATACCAGATAATAAATTGTTTGTTGCTAGTAATACAGGTAGTATTATAGCAGTTAAA------GCACAGGATACTGTTTACAGTATTTCACCATGTGTGTCTGTGCCTGTGTCAGTGGGATAT------GATCCTAATTATGAACAA---GCTCTATTGTTTAATGGACTTGAATGCAATCAACGTGCTGTGGCAGTTAGCATACCTGCTTCTGCTTAT---TGGCTTCGCACTGTTTCTGACAATCAAACTGCTGGTGTGTTTGACACACCATCTGGTTGTGTTTATAATGTTATTAATAGAACTGATATCACAGTTAATGCCTGTGATATGCCTATT------------GGTAACAGTTTATGTTTAATCAACGCTACGAGCACGCAAGCTCGCGCTACGAGCGGTGATGACACTAAGTCGTATTTAAGTTTGGTTAACTACGACCCTACTTAC---ACATCACTGACTAAAGTGCTCACACCTGTTTATTGGGTTAGCATACCAACTAACTTTACACTAGCTGCAGGTACTGAATATATTCAGACAACCTCACCAAAGATTAATATTGACTGTGCTAAATACCTTTGTGGTGATTCTGACAAGTGTCTCACAGTTCTATTGCAATATGGAACTTTTTGTGATGACGTAAATAAAGCATTAGCTGAGGTTAGCTCAGTTATTGATTCCACTATGGTTTCGCTAGTCTCTGAATTGACAGCTGATGTTGTGCGTAGT---GAAAACACTGCGTTTGACACTACTTATAATTTCACCTCTTTGATGGGCTGTCTTGGTTCATCTTGCAATACAAGAAATTACCGATCTGCACTTTCTGATCTTTTATATAATAAAGTCAAAGTTGCAGACCCTGGTTTTATGAGTTCG---TACCAAAAGTGTATAGACTCTCAGTGGGGTGGTAGTGTACGTGATTTGATTTGTACACAAAATTTTAATGGCATTTCTGTCTTACCACCAATTGTTTCACCAGCTATGCAGTCACTTTACACATCACTGCTTGTGGGTGCTGTCGCATCTGCTGGATACACGTTTGGTATTACATCCGTAGGTGTTATACCATTTGCAACTCAGCTTCAATTCAGGTTGAATGGTTTAGGTGTTACTACTCAAGTTTTGGTTCAAAACCAACAACTTATAGCTAACTCTTTCAATAATGCTCTGACTAATATCCAGAAAGGATTCGAT------------------------------------------GCTACTAATTTAGCCTTGAGTCAGATGCAATCCGTTATCAACCAACATGCACAGCAATTACAAACTTTGGTGAATCAGCTAGGTAATTCTTTTGGTGCTATTTCTTCATCCATTAATGAAATTTTCAGCCGCTTGGATGGTCTTGAAGCCAATGCTCAGGTAGATAGAATTATAAATGGACGCACTGTTGTGCTTAACACGTATGTTACACAACTATTATTGAAAGCATCAGAAGTGCGTTCTCAAGCTGCTTTAGCTCGTCAGAAAATAAGTGAGTGTGTTAAGGCGCAATCTCTGCGCAATGATTTTTGTGGTAATGGCACACATGTGTTCTCTGTACCACAATTGGCTCCTAATGGTGTAATGTTTATACATTACACATATCAACCTACTGCTTATGCACTTGTGCAAACAGCTGCTGGGCTTTGTTATAATGGCACT---------GGTTATGCACCACTGAGTGGCATGTTTGTGCTACCCAATGAC---ACTAAC------------CTCTGGCATTATACTAAAATGAATTTTTACAATCCTGTAAATATAACATTCGAAAACACACAAGTGCTTGACTCTTGTGCAGTGAATTACTCTTATGTGAACTACTCGGTTATTGAACCTACACCACCTAGTAGT------TACAACTTTACAGAAGAATTTAATAAATGGTACAAAAACCACAGTTCTTATTTCAATAATACTTTTAACCCAGGGGATTTTAATTTCACTGGTGTTAATATTTCAGAACAATTAGCT------------------------------------------ACACTCACAGATGTTGTTAATCAGCTAAATAAGTCTTTTATCGACCTTAAGCAGATGAATGTTTACGAGCAGACTATAAAATGGCCTTGGTATGTATGGCTTGCCATGATAGCAGGGTTAGTAGGTTTAGTTTTAGCAGTTATTATGCTACTTTGCATGACAAACTGCTGTTCTTGCTTCAAAGGACTTTGT---TCTTGTAGACATTGT------TCCTATGATGAAATTGAAGATGTATATCCAGCTGTTCGTGTGCATAATAAACGAACAGAA >BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus ---ATGATACTTTCTCTTCTTCTTCTTGTTATTGCTGTGTGTGTTAATAATAACTATGCTTGGCTTGGTTTGCAGCGCAATGCTATTCCTCCTTCTAACCAGGATGGTGAGTGTGGTGGTGATCCTGGTAAGCTGCCTAAT---CTTAATCTAGGTTTGCCACCAAAT---AAGACAGTTTTTGTTAGTGGTTATTTACCACTACACAAAGGTTGGGTTTGTCCCACACATCCACTTGGAGGTGGAGGTTATGGTACTACTTTTAATGACATTCATGCCATTTATTGGTCCTATCATTCTACTGCAAATGCTGTTGAACTAGCTGTTTCGTCTGGTAATGGTTCTGTGACCAGA------------------------------GAT---TGGTCACTTTATGTTCACCACAGTAATAATCAGGGTTATATGTATTTTAAGATCTGTAGGTGG---GGTGCCGTTTACCCATTGAACTTATCACCAAACCACAATAGAGGT---GATTGTTTGGTTAATAGAAAGTTCAACTTTAGGTTCTTACATGGCGCTAATCAAGTCTTAGGTGTTACATGGTCTTCTAACTATGTAACGTTGTATGGCTTAAATAATACTTACAGGTTTTACTTA------CACAACAATTGGGAACGTGCTACTGTACGTTGCCATACAAAACAGTCATGTGCA------TTTTTCCCTGTGGAAAATGTGACTACTTTAAACATCACTACTAATGGTGAAGGTTTGATAGAGTCATATGATGTTTGTGCAGACTGTGGTGGCTTCCCAGTTCAT---GTCTTTCCAGTTTTAGAACACGGCTATATCCCTAAT---GATTTTAGTTTCTCTAAT---------TGGTTTATGCTGTCTAATACTTCTACC---------TTTTTGCAAGGTAAATTAGTTAGCACACAACCATTGAAG---------------CTAATGTGCTTGTGGCCTGTGCCATCGTTGCTTGCTAACGATGAAAAAATATTCTTCAAT---------GCATCCGGCGCCACTTGTAATGGATATCAGTTTGATGGTGTCGCTGACGCTATTAGGTTTTCTTTGAATTTTAGTAGTGACCAGGTTTTTAATGGGGTTAACAATATCGTTTTTGATGTTGAAGGTGGTACATTCGAGTTCTTTTGCACTAATGATACGAGTGTTAACCCTACTTATAGGTATGTCCCTTTTGGACAACTTACAGAGATTTACAGATGTTTCGTTGAAACC---------ACAGCTGAAAATGGTACACACACCACGTTTGTTGGTATTTTACCACCAGTTGTACGTGAGATTGTTGTATCCAGATTAGGTGCTATATATATTAACGGTTATCGCCTAATCTCTCTACCAGTTATTGAAAGCATTGTTTTCAATGTCACTAGCAAAGTGGGTTCTGATTTTTGGACCGTTGCTTTTGCACAAGATGTAGAAGTGCTGCTCGAACTTAATGCTACAAATATTGTTGACATACTTTACTGTGAAAGTCCCATTAACAAGTTAAAGTGTCAACAGTTGACT---TTTTCACTAGATGATGGTTTTTATCCTGCCAGCAGTGCATACACAGAGTATACACCAAGATCATATGTCGCTCTACCGTATCATGCCACCCACACTGAAGTAGTTCTTGGTGTACACCTCTCATTGTAC---------------------------------------------------------------------ACCAAACATAGTGCTACCCTT---------AATGGTGGT---------------------AATGACACAATTTGTGTGAACACAACCCAGTTCACCACAGTACTTAATGCTTCA---------GTTTATACCGGT---GCCAGAGGTGATGTCGTTAATGTCAATTGC---------------CCATTTACGTGGGCT---------TCGCTCAATGACTATCTTAGCTTTGGTACC------------ATTTGTTTTTCATTTGAA---CCACTA---------------------------CCTGGTGGTTGTACTATGAGCATTAAT---GTAGTGAATCTTGGTTAT------------TACACACCTTTCGCC---ACATTGTATGTGGGCTATACTAGAGGACATGGTATAACGGGT---------GTGTCACAGAAGGTTGGTGGTATTTTTGACCCTAGTTTTATTACGTTA------GACACTTGTACTGAGTACACTGTCTACGGAATAACTGGCAAAGGTGTTATTACTAGC---CTCAACAAGACCATTGTTGCTGGT---TTGTATTATACATCTACGTCAGGTCAACTTTTGGGGTTCAAGAATTCCACCACAGGTGAGGTCTTTGCTGTCAGACCTTGTGATTTAGCCAGTCAGGTTGCCGTCTAC------CAGAATGAC------------------ATTATTGGTGCCATGACAGCTAGTCGTAATAGTAGTTTTGGCTTTGCTAATGTTAGTGAGCTTTCTAACTTCTATTACCACTCTAATGGGCACTTA---------------------------------------------------------------------GGTTGTGAAGAACCAGTACTTATTTATGGTAAGATGGGCATTTGTTCTGATGGCTCACTCACTGAAGTCAACAACAAAGATGCTGAA---------------------------------------------------CAGCAACCTGTGTCACCAATTGCTACCGCTAAT---GTGACTGTCCCAGTCAATTTTACAGTCTCTGTTCAGGTTGAGTATTTACAGATGTACATGCAACCAGTCAGTGTTGATTGCAACACGTATGTCTGCAGTGGTAATGTGCACTGTTTACGTTTGCTCACCCAGTATGCTTCGGCTTGCAGAAACATTGAGTCTTCTTTACAG---CTTAGTGCACGTCTTGAATCGCTAGAAGTGAATAGTGCAATTACAGTGTCAGAACGTGCAGCATCACTTGCTAACATCACTAACTTTGAGAAT---TACAACCTTTCAGTACTACTA------------------CCT---AATCTTAACGGCCGTAGTGCTATGGAAGATTTATTATTCAACAAAGTGGTCACCAACGGTCTGGGCACAGTCGACCAAGACTACAAACAGTGCATAAAAGATAAAGGCGTTGGTGATGTTGCTGATGTGGCTTGTGCGCAGTACTATAATGGTGTAATGGTGCTGCCTGGTGTTGTCGATGACACTAAAATGAGTTTGTATACTGCTTCTTTAGTTGGTGGTATGGTGTTAGCCGGTTTTACAGCCGGTGCAGCC------------ATACCATTCTCTTTAGCAGTCCAAGCTCGATTAAATTACGTTGCATTACAAACAGACGTGCTGCAGCGAAACCAACAGATTTTGGCTGAATCCTTTAATAGTGCTTTGAGCAATATTACGGAAGCTTTCACTGAGGTTAACGAGGCTATTAAAAATACAGCTGATGCCATTAATACTGTTGCCACTGCACTCGGTAAGGTACAGAGTGTGGTGAATCAACAAGGTGAGGCTTTAGCACAGTTGACAAAACAACTTTCGTCTAATTTTCAAGCTATATCGTCGTCAATAGAGGACATATATCTAAGGTTGGACAAACTCGCAGCTGATGCTCAAGTTGATCGTCTGATTTCTGGCAGACTTGCTGGCTTAAATGCCTTCGTTACGCAGACTCTGACTAAGTACACAGAAGTACGCGCTTCCAGACAGCTTGCACTACAGAAAGTTAACGAGTGTGTTAAATCACAATCTAGCCGTTACGGCTTTTGTGGTAATGGTACACACTTGTTCTCAGTTGTTAATGCTGCTCCCAATGGCATTATGTTTTTCCACACAGTTTTGATCCCTAGTAGTTATACAACAGTACAGGCTTGGGCCGGTGTTTGTGTAAATGGTGATGTAGGACTGATACTTCGTGATGTCCGTAACACACTATTTTATTTAGATAGC---------------------AAGTACTATATCACTACACGTGATATGTACCAACCAAGAACACCGGTCCAGTCTGACTTTGTACGCATTTCAAATTGTAGCGTTTCTTATGTTAACATTACTAGTGAACAGCTGGGTGATATAATTCCAGATTAT------TTAGATGTAAATAAGACTCTTAACGACCTTCAACAGTCTAGACCCAATTACACAGTGCCTGATCTGGGATTGGACCAGTATAATACAACAATCTTAAACCTCACTTCAGAAATTGCCATGTTACAAAATAAATCAGATAGTCTCATAGAATCCACTGTGAAACTCCACAAATTGATTGAACAACTCAACCAGACTTATGTGGACTTAGAGTGGCTTAACAGACTGGAATCTTATGTCAAATGGCCTTGGTGGGTGTGGCTAGCCATCCTACTGGCTTTGATATTTACTAGTTTCATCCTACTCTACTGTTGTTGCAGTACAGGGTGTTGTGGATGTACTAGTTGTCTTGCT------------GATTGTCGTGGTCAACGTTTACAA------------------CGTTACGAAGTTGAGAAAGTGCACATTCAG >BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus ------------ATGCTTTTTCTCGCAGTGTATGCGGCAGAATTGCTTGTGCTTATTACACAAATTCCTGCTGTTTTTAGTTATGGT---------GGTGAAAGGTTTACTTGCTCGCCTAATTATGCCAGTTTGCCAAAT---TTGAACCTAGGTTTGCCCCCTAAT---TCCACAGTTTTGGTTAGTGGTTATTTGCCTAGACCTGGTGACTGGGTATGT------------------TACACTGGTACA---ACAACGCATGATAATATACGTGGTGTGTTTTGGTCATATTATAGTCATGGTTCGGCAGTTGCCATAGGGATATCTAATAAAGATCAGACTACTACACCA------------------------------GATCAATGGGCACTATTTGCGCATCATAGTAATAATGGTGGACAGTTTTACTTACGTATATGTAAGTGGTTGAATGGCGGA---AACTTGGATTGGGCAACGGAGAGTAGTCGAGGA---CTCTGTATTGTTAATCGAAAGTTCCGCTTTCAATTCTCACATGCTGCTGGACAGGTAATTGGTGTTACCTGGTCCTCTAATGTTGTCACTTTTTATGGT---AGTAGGTCTTATCGTTATTACTTG------ACTAATAACTGGAACAGAGTAGATGTTAAGTGTGTAAATTATCCCACATGTATT------ATCAACCCTGTTCGTAATATTACTACTTTTAATGTAACAACGAATGCCCAAGGTTTATTTCAATCGTATACGGTGTGTGATGACTGTAATGGCTTCCCACAACAT---GTGTTTGCTGTCTTAGACGGTGGTTACATACCTAGT---GAGTTTGGTTTGGACAAC---------TGGTATGTTCTTTCTAATACGTCTACA---------GTGCTGGACGGACGCGTGTTGACTAATCAGCCTCTATTA---------------GTGGCATGCCTGTGGCCAGTGCCATCGCTGCTTTCAAATGATAACCCTATCCATTTTAATATGTCACTTAATACAGGTGTTAATTGCAATGGTTATAGTGAGGTGCGTGAGGTGTCACACTTACGCTTTGCCCTCAACTTTACCAACCAACAAGTGCTTAATGGTGTCCATAACATAGATCTGTTAGGGGACACATTTAACTTCACCTTCACATGTACTAATAACAGTGACATCACTAAGGGCGAGCGTTTTGTGCCATTTGGTTTCTTAGACAATGTCTATCGTTGCTTCGTTTATTTT---------GACGTGGGCAACGGTACTGTGAACAAGTTTGTTGGCATCTTACCACCCGTTGTGAAGGAGATTGTCATTTCTAAGTTTGGCACTGTTTACATTAATGGAGTCAATATGGCCACATTACCACCTGTTAACAGTGTAATTTTTAATGTTACTAGCACAGTGGGTTCAGATTTTTGGACTGTAGGTTTCACGGACCTGGCTGATGTCATGATAGATATTAATGCAACTAGAATTGTTGACTTACTCTACTGTGACACACCTATTAATAAACTTAAGTGCCAGCAGTTATCA---TTCTCGTTGGATGATGGCTTTTATACCACCACTAATGTATACAAGCAAGCGGTCCCACGCACATATGTCGCATTACCATATCATGCAACTCACAGTGCTATTAATATTACTGCAGAAGTAAGTGTTAAT---------------------------------------------------------------------AGCAATGATGACCGGTTTTTG---------ATTAATGGTCTT------------------AATGGTACTTTCTGTGTTAATACTACACAGTTTACTGTT------ATTACCCATTTTACGCAATATACTGGT------ATGCGTGTTGCTATTGAAAACTTAGACTGC---------------CCTTTTACGCTTGAT---------TCTCTGAATAACTTCCTGTCCTTTGGCTCT------------ATCTGCTTCTCTACTTAC---GCAGTG---------------------------GGTGGTGGTTGTAGGATGCGCTTGGAC---AAGGTGCTCATTTCCACA------------CCAACACCCTGGCGA---ATTCTGAACATTGTGTATACAGATGGAGACCGTACTACAGGT---------GTTACTAAGGCTAGTGGTGGCATTTTTGACCCTAGTGAACTATATGTT------GGTGTTTGCACTGACTACACCATTTATGGTATCTCTGGTCGTGGTATTATAAACCAG---CTTAATACAACTATTATTGCTGGT---CTGTACTACACGTCACCAGCTGGTCAGTTGTTAGGTTTCAAAAACGCCACTACAGGTGATATATATGGTGTTAGACCATGTGCACTATCGAGTCAGGCTGCTGTGTAT------CAAAATGAG------------------ATTATTGGTGTGATGACAGCTTCTGCAAATGAGAGCTTTGGCTTCCAGAATGTCACTGAGACCCCAAAGTTCTTTTATCACTCCAATGGTAATTCA---------------------------------------------------------------------ACTTGTACAGAACCAGTACTCACATATGGTAGTGTTGGTGTTTGTCCTGATGGAACCCTCATCATGGTACAAACACGCTCAGGTAAT---------------------------------------------------GTTAATCCTGTGTCACCTATCGTTAGTGGCAAT---ATTACTATCCCACTGAATTTTACTGTTTCTGTACAGGTTGAATATTTGCAGATGTACTTACAGCCCGTTTCAGTGGACTGTAATATGTATGTTTGTGGTGGCAACCCCCATTGTCTCAGACTTATGTCACAGTATGCTTCCGCTTGTCGCACCATAGAGGAGTCTCTGCAG---CTGGGTGCCCGCTTGGAGTCGACAGAAGTGGCTAACACTATTTCCGTTTCCTCACAAGCTGTGCAGCTTGCTAATATAACTAATTTTGACTCA---TATAATGTTTCTGTTCTACTT------------------CCT---AGAGCTAATGGTAGAAGCTTTATTGAAGACCTGCTATTTGACAAGGTTGTCACTAGTGGCCTGGGTACAGTAGACCAGGATTATAAACAGTGTGTCAATGAATGGGGTATTGGCGAAGTTGCTGATCTTTCATGTGCACAATATTACAATGGTATAATGGTACTCCCTGGTGTCGTTGATGCCAATATGATGACGCTCTACACGGCTTCCTTGACTGGTGCTATGGTTTTTGGTGGTATTACTGCTAGTGCTTCA------------ATACCATTCTCACTTGCAGTACAGTCACGTTTAAACTACGTGGCACTGCAAACTGATGTGCTTAACCGTAACCAGGAAATATTGGCACAGTCCTTTAATAGTGCTTTAGGCAACATAACTGCTGCTTTTTCTGAGGTGAACCATGCTTTTCAGGAAACATCAGATGCAATTAATACTGTTGCACAAGCACTTGGTAAAGTTCAGACTGTTGTCAATGAGCAAGGGCAGGCGCTTTCACAGCTTACTCGGCAATTAGCTTCTAATTTCCAAGCTATTTCAAATTCCATAGAGGATATTTATAATAGATTGGACGGGCTGACTGCTGATGCTCAGGTTGATAGGCTTATTACAGGTAGAATTGGTGCTCTTAATGCATTTGTGGCACAGACTCTCACTAAGTATACTGAGGTTCGTGCGTCGCGACAGCTGGCAATTCAGAAGATTAATGAGTGCGTTAAGTCACAGTCAGCTAGGTTTGGCTTCTGCGGTAATGGCACTCACTTGTTTTCAATTGCTAATGCTGCACCAAATGGCATCATGTTGTTCCATACAGTGTTATTACCTAGTGAATATACCACTGTGCAGGCGTGGGCTGGTATTTGCATTGATAACAATGTGGGCCTGATTCTTAGGGACTTTAAGACCACACTGTTCTTCAGTGAC------------------------AAGTACTATGTAACCCCGCGCGATATGTTTGAGCCGCGCACACCTGTTCAAGCTGATTTTGTACGCATAGCTAATTGTAGTGTCAATTACTTAAACATTAGTTCATCTGAGTTGGGTACTATTATACCTGATTAC------ATTGATGTCAACAAGACGCTTGAAGAGCTGGAACAGCAACGACCTAATTACACGTTGCCAGAGCTTGACATAGATCGTTTTAACAACACTTATCTCAACCTGTCAGCAGAGATTGCAGAGCTTCAACGTAAGTCTGAGAGTTTACAGAACTCTACAATCCAGCTGCAAGAGCTTATAGAGCGAATTAATAGTTCCTATGTGGACCTTGAGCTGCTCAAGCGTATCGAGACATATGTTAAATGGCCTTGGTACGTTTGGTTAGCTATTATTCTTGTTATGTCTCTCTTTAGCTTTTTGATGCTATACTGCTGTTGCATGACTGGTTGCTGTGGTTGCTGTAGCTGCTTAACTAGCTGTTGCTTTGATTGTCGTGGTAAACGTTTACAA------------------CAATACGAAGTGGAAAAAGTTCACATCCAG >BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus ------------ATGCTTTCTCTTGCAGTTTACTTTGCAGAGTTGCTAGTAATTATATCTTATTTACCAGATTTGGTTACA---------------GGTGATCTTAATGGCTGTGCTGATGGTCATAATAGGTTACCGAAC---CTAAATCTAGGTTTGCCACCAAAT---AGTACGGTATTTGTTAGTGGTTACCTACCCCGTAAAAATGGGTGGGAGTGCCCAACCATTAACAACCAATATGGTGGTTCA---ACCAACTATGAGAATGTCCATGGTATTTTCTGGTCTTATCATTCTACAGCTCAAAGATTTGAGTTAGGTGTGTCCAACAAGGACCAGTTGGTGAATACA------------------------------AACAGATGGGCACTCTACGTTTACCAAAACAACAATGAAGGTGTGCTAAAATTACGCATCTGTAAGTGGTTGCGTGGTCAGTACAGCTTACAGTGGTTACATGGTGCTAGACATGGG---CAGTGTGCAGTAGATAGAGCGTTTAATTTTAGGTTTGTACACGCTGAAAATCAGGTACTAGGTGTCACTTGGTCCTCTAATTATGTCACTTTTTATGGTATTAATGGTAGTTACCGTTATTACATA------CCTAATGACTGGTTTAGGGTGTCCGTTAAATGTGAAAATAAGTATGTCTGTGCT------ATATACCCTGTGTATAACCAGACTACCCTCAATATCACAACAAATGCTAAGGGCTTGATTAAGGAATATAGCGTGTGCGAGTCTTGCAATGGTTTCCCTGCTCAT---GTCTTCCCAGTTTTGGAAGGTGGTAAAATACCAGCT---GACTTTGATTTTACTAAC---------TGGTTTTACTTGTCAAACACCTCAACA---------CTTGTTGCTGGTCGTGTTGTCGGCATTCAACCACTTAGA---------------CTACTCTGTTTATGGCCAGTACCATCTACTACGGCTAATGATGACAAGATTTACTTTAAT---------ACAACAGGTGCTAATTGTAATGGATTTGTTGGTGAAGGCGTTGCAGATGCATTGCGTTTTTCTCTGAACTTCACATCAAACCAGGTCCTTAATGGTGTCCATAACATCATTTTGGAAAGCACCTCTTCAAAGTTTACTTTCACGTGCCGTAATGATTCTGAATCCACCTTTTACAGA------GTTCCTTTTGGTGAAACGGGACAAGTCTATTATTGTTTCATTTTCACA---------GAGGCAGGCAATCAGAGCTATAACACATTTGTAGGTATTTTACCACCTGTGCTAAAAGAAATCGTTATTTCTCGCTATGGGTCCATTTATCTAAATGGTGTCAAATTGTTTAGCTTGCCTACTCTTGAAAGTGTCATTTTTAACGTCTCTAGTAATGTTGGCTCTGATTTCTGGACCATAGCCTATGCACAAGATGCTCAGGTTATGGTGGATCTCAATGCAACTAGCATCACTGATTTGTTGTACTGTGATACACCTTTAAATAGACTTAAGTGCCAGCAGCTCAGC---TATGCCCTAGAAGACGGTTTTTATCCTACTACCAACATATATACTAAGGATATTCCTAGGTCGTATGTTGCCTTACCTTATCACGCCACACATGCTGTTCTTAATATAACAGCATATATTGGTGAC------------------------------------------------------------------------AAGAAGGATGACCGCATTCAA---------ATCAATGGTTTT------------------AATGACTCTTTTTGTGTGAACACAACACAGTTCACTACAAAT------------TTTGTCCAAACAGATTCTGGCATTATTAAAGCTGAGTTGAAAAATGGTGATTGC---------------CCTTTCACCTTTGAC---------TCAATTAATAATTATTTAACATTTGACTCC------------ATCTGCTTCTCAATTGAG---CCTATT---------------------------GGCGGTGGTTGCACAATGAACATAGTC---CGCACATGGTTTGGCCAA------------TCTGTACCGTGGAGG---ACTCTTTACGTGTCTTACACTAAAGGCTCCAGAATCACAGGT---------GTCAAAACCCCAAACACTGGCGTGTTTGACCCTAGCACTTTTGTAGAG------GATGTTTGCACTGACTACACTATCTATGGTATGTCCGGTAGAGGTGTAATTAGTCGT---TCTAATGCTTCATACATTGCTGGT---CTCTATTACACAGCCATTTCGGGACAACTTTTGGGCTTCAAAAATGCAACCACAGGTGAGACATTTGTTGTGGTGCCTTGTGACTTATCTAGCCAGGCTGCAGTCATT------GGTGACAAA------------------GTTGTTGGTGTTATGACCTCTATTACAAACTCTTCTTTTGAGTTTGTTAAGTCTATTGAAACACCTAACTTTTATTACTTGACCAATGCTACAGCT---------------------------------------------------------------------AATTGCACATCGCCCGTTATCACTTATGGTAAGTTGGGTGTTTGTGAGGATGGTTCCATTGCTGAAGTCAAGGTTAATACCCATGTG---------------------------------------------------CAAACACCGGTCTCACCTATTTCAACAGGCAAT---ATTACAGTGCCCTCCAACTTCACAGTTTCTGTGCAGGTCGAATACTTGCAAATGTACATGAGACCGGTCAGTGTAGACTGTGCTATGTATGTTTGTAATGGCAATCCACATTGTCTACGACTGCTGACACAGTATGCTTCCGCATGCAGAACAATTGAAGACGCACTACAA---TTGAGTGCTCGTTTGGAGTCTATTGAGGTCAATAGTGTCATCTCTGTATCCGAAGATGCGCTTGAACTGGCCAACATTAGTAACTTTGACCAT---TACAACATGTCTGCACTGCTG------------------CCA---AAGAAAAATGGGCGCAGTTTCATTGAAGACCTGTTGTTTAACAAAGTTGTTACTAATGGTCTTGGCACAGTTGACCAAGATTATAAAAAGTGCATGAAAGATAAAGGCTTCGGTGAGGCCTCTGACATTGCGTGTGTACAGTATTACAACGGCATTATGGTTCTGCCTGGTGTGGTTGATGACAGCAAAATGGCTTTGTACACTGCTGCTTTGACTGGTGGCATGCTTTTGGCCGCTTTCACTGCTGGAGCTTCT------------ATACCATTTTCCTTGGCTGTCCAATCTAGACTTAATTATGTAGCCTTGCAAACTGATGTTTTACAGAAGAATCAACAAATTCTGGCAACATCCTTTAACAATGCTATGAGCAACATTACTGTCGCTTTTACTGAAGTCAACCAGGCTATTAAAGAAACATCTGATGCCATTAATACTGTTGCTAAGGCCCTTGGCAAAGTTCAATCCGTTGTGAATGAGCAAGGTCAAGCATTGTCGCAGCTTACACGTCAACTTGCTTCTAATTTTCAGGCTATATCCTCCTCTATAGAGGATATATATAATAGGTTGGATAGCTTAGCTGCCGATGCCCAAGTAGACAGACTGATTACCGGCAGATTAGGTGCCCTTAATGCATTTGTCACACAAACTCTAACTCGCTATACCGACGCACGTGCTTCTCGTCAATTGGCTATTCAGAAGATCAATGAGTGTGTGAAATCTCAATCCATGCGTTATGGGTTTTGTGGTAATGGTACACATTTGTTTTCCATTGCTAATGCTGCACCTAATGGTGTTATGCTGTTCCACACAGTTTTGATCCCTACTGAATTTGTCACTGTTGAGGCTTGGTCTGGAGTCTGTGTCGATGGTACACATGGTCTCATTTTGCGTGATGTTCGCACTACACTGTTTCAACAAGGTAGT---------------------ACTTATTACGTGACTACACGAGACATGTTTGAACCACGAACACCTGTTGCTGCTGACTTTGTCCGTATTGCTAATTGTAGTGTGACATACGTCAATATTACTGCTGATTCTCTTGGTGAGATCATTCCAGATTAC------ATTGACGTGAATAAAACTCTTGAAGAGTTG------GGCAGGCCTAACTTCACACTGCCAGATTTCAACTTGGATCAGTTCAATAACACATATCTCAACCTTAGTGCTGAGATAGCTCTGTTGAACGCCAAGTCTGAAAGTCTGTACAACACTACTCAGAGACTTGAGAAATCGATTGAAAACATTAACAATTCTTACATAGACTTGGAGCTGCTTAATAGGCTTGAATCCTATGTGAAGTGGCCGTGGTATGTCTGGTTGGCAATCTTCCTGGCTTTGATACTGTTTTCATTTCTCATGCTTTATTGTTGTATGGCTACTGGTTGTTGTGGCTGCTGTAGCTGTCTTTCTAATTCATGCTTTGACTGTGGAGGACGACGTTTACAA------------------CGTTACGAAGTAGAAAAAGTCCACATTCAA >BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus ------------ATGCTTTCCTTGGCTATTTACATCGCCGAAATTTTAGCATTCTTACAA---CTGCCTGATTTAACTACAGGGGCTCCA------AATAAGGATGGCGACTGCGGTGATGGCTATAATAGGTTACCTAAT---TTAAATTTAGGTTTACCTCCTAAT---TCTACTGTTTTTGTTAGTGGCTATTTACCTCAGAAAACAGGCTGGGTTTGTCCA------GAAAACAAAGAAGCTGGTGCT---ACCTCTTACGAAGGCGTGCATGGTGTGTTTTGGTCGTATTATGCAACTGGTCAGGATGTTGAAATAGGTGTGTCTAATTTTAGACAGCTTAACAACACC------------------------------AACAGATGGGCTTTGTATGTGCACCAGAAGAACAATGACCATGTTTTACACTTTCGTATTTGTAAGTGGCTAGCTGGTACTTATACCCCTCAGAGTAGGCCATGGTCACGCTATGGC---CAATGTGCTGTTGACAAGCGTATTAGTTTTACATTTGAGCACCAGGGTAATCAAGTGCTTGGCGTTACTTGGTCTTCTAATTATGTCACTTTTTATGGTATTAGTAAATCATACCGTTATTTTCTA------AAAAATGATTGGTATCGTGTTACTGTAAAGTGTTTGAACAAGTATGCTTGTGCC------TTGTACCCTGTGTATAACCAAACAACCCTCAACATCACAACTAATGCACGTGGGTTGATTCAATCCTACAGTGTGTGTGATAGTTGTAATGGGTTTCCTGCGCAT---GTTTTCCCTGTGCTAGAGGGAGGTAAAATACCTGCA---GATTTTGATTTTACAAAT---------TGGTTTTATTTAACCAACTCCTCTACG---------CTGGTTGCAGGGCGTGTCGTCGGTATACAGCCACTCAAG---------------CTACTTTGTTTATGGCCTGTGCCATCAATTACGGCTAATGATGATAAGATATACTTTAAC---------ACTACGGGTGCCAACTGTAATGGTTTTGTTGGTGAAGGTGTTGCTGATGCTTTACGCTTTTCCCTCAACTTCACTGCAAACCAAATCCTTAATGGTGTCCATAACATCATTTTGGAAGGTACAGAGGCCAAGTTCACTTTTACATGCCGTAATGATTCTGAGTCCACGCTCTTTAGA------GTCCCTTTTGGTGTTACTGGACAGGTGTATTACTGTTTTGTTTTCACT---------GAGTCTCGTAATCAAAGCTATAATACGTTTGTGGGTATTTTGCCTCCCATACTTAAAGAAATTGTCATCTCCAGGTACGGGTCCATTTATTTAAATGGTGTCAAACTATTTAGCTTGCCGGTTTTACAGAGTGTTATTTTTAATGTTTCTAGTAAGGTTGGTTCTGATTTTTGGACTGTAGCCTATGCACAAGATGCTCAGGTTATGGTGGATCTCAATGCAACCAGCATTACTGATTTGTTATATTGTGACACACCTTTAAATAGACTCAAATGCCAACAGCTCAGC---TATGCTCTTGAGGACGGTTTTTATCCTACTACCAATATATATACTAGGGATATCCCAAGATCCTATGTTGCTCTGCCTTACCATGCCACACACATGGTGCTCAACATAACTGCATATATTGGTGAC------------------------------------------------------------------------AAGAAGGATGACCGCATTCAA---------ATCAATGGTTTT------------------AATGACTCTTTTTGTGTGAACACAACACAGTTCACTACAAAT------------TTTGTCCAAACAGATTCTGGCATTATTAAAGCTGAGTTGAAAAATGGTGATTGC---------------CCTTTCACCTTTGAC---------TCAATTAATAATTATTTAACATTTGACTCC------------ATCTGCTTCTCAATTGAG---CCTATT---------------------------GGCGGTGGTTGCACAATGAACATAGTC---CGCACATGGTTTGGCCAA------------TCTGTACCGTGGAGG---ACTCTTTACGTGTCTTACACTAAAGGCTCCAGAATCACAGGT---------GTCAAAACCCCAAACACTGGCGTGTTTGACCCTAGCACTTTTGTAGAG------GATGTTTGCACTGATTACACTATCTATGGTATGTCCGGTAGAGGTGTAATTAGTCGT---TCTAATGCTTCATACATTGCTGGT---CTCTATTACACAGCCATTTCAGGACAACTTTTGGGTTTCAAAAATGCAACCACAGGTGAGACATTTGTTGTGGTGCCTTGCGACTTATCTAGCCAGGCTGCAGTCATT------GGTGACAAA------------------GTTGTTGGTGTTATGACCTCTATTACAAACTCTTCTTTTGAGTTTGTTAAGTCTATTGAAACACCTAACTTTTATTACTTGACCAATGCTACAGCT---------------------------------------------------------------------AATTGCACATCGCCCGTTATCACTTATGGTAAGTTGGGTGTTTGTGAGGATGGTTCCATTGCTGAAGTCAAGGTTAATACCCATGTG---------------------------------------------------CAAACACCGGTCTCACCTATTTCAACAGGCAAT---ATTACAGTGCCCTCCAACTTCACAGTTTCTGTGCAGGTCGAATACTTGCAAATGTACATGAGACCGGTCAGTGTAGACTGTGCTATGTATGTTTGTAATGGCAATCCACATTGTCTACGACTGCTGACACAGTATGCTTCCGCATGCAGAACAATTGAAGACGCACTACAA---TTGAGTGCTCGTTTGGAGTCTATTGAGGTCAATAGTGTCATCTCTGTATCCGAAGATGCGCTTGAACTGGCCAACATTAGTAACTTTGACCAT---TACAACATGTCTGCACTGCTG------------------CCA---AAGAAAAATGGGCGCAGTTTCATTGAAGACCTGTTGTTTAACAAAGTTGTTACTAATGGTCTTGGCACAGTTGACCAAGATTATAAAAAGTGCATGAAAGATAAAGGCTTCGGTGAGGCCTCTGACATTGCGTGTGTACAGTATTACAACGGCATTATGGTTCTGCCTGGTGTGGTTGATGACAGCAAAATGGCTTTGTACACTGCTGCTTTGACTGGTGGCATGCTTTTGGCCGCTTTCACTGCTGGAGCTTCT------------ATACCATTTTCCTTGGCTGTCCAATCTAGACTTAATTATGTAGCCTTGCAAACTGATGTTTTACAGAAGAATCAACAAATTCTGGCAACATCCTTTAACAATGCTATGAGCAACATTACTGTCGCTTTTACTGAAGTCAACCAGGCTATTAAAGAAACATCTGATGCCATTAATACTGTTGCTAAGGCCCTTGGCAAAGTTCAATCCGTTGTGAATGAGCAAGGTCAAGCATTGTCGCAGCTTACACGTCAACTTGCTTCTAATTTTCAGGCTATATCCTCCTCTATAGAGGATATATATAATAGGTTGGATAGCTTAGCTGCCGATGCCCAAGTAGACAGACTGATTACCGGCAGATTAGGTGCCCTTAATGCATTTGTCACACAAACTCTAACTCGCTATACCGACGCACGTGCTTCTCGTCAATTGGCTATTCAGAAGATCAATGAGTGTGTGAAATCTCAATCCATGCGTTATGGGTTTTGTGGTAATGGTACACATTTGTTTTCCATTGCTAATGCTGCACCTAATGGTGTTATGCTGTTCCACACAGTTTTGATCCCTACTGAATTTGTCACTGTTGAGGCTTGGTCTGGAGTCTGTGTCGATGGTACACATGGTCTCATTTTGCGTGATGTTCGCACTACACTGTTTCAACAAGGTAGT---------------------ACTTATTACGTGACTACACGAGACATGTTTGAACCACGAACACCTGTTGCTGCTGACTTTGTCCGTATTGCTAATTGTAGTGTGACATACGTCAATATTACTGCTGATTCTCTTGGTGAGATCATTCCAGATTAC------ATTGACGTGAATAAAACTCTTGAAGAGTTG------GGCAGGCCTAACTTCACACTGCCAGATTTCAACTTGGATCAGTTCAATAACACATATCTCAACCTTAGTGCTGAGATAGCTCTGTTGAACGCCAAGTCTGAAAGTCTGTACAACACTACTCAGAGACTTGAGAAATTGATTGAAAACATTAACAATTCTTACATAGACTTGGAGCTGCTTAATAGGCTTGAATCCTATGTGAAGTGGCCGTGGTATGTCTGGTTGGCAATCTTCCTGGCTTTGATACTGTTTTCATTTCTCATGCTTTATTGTTGTATGGCTACTGGTTGTTGTGGCTGCTGTAGCTGTCTTTCTAATTCATGCTTTGACTGTGGAGGACGACGTTTACAA------------------CGTTACGAAGTAGAAAAAGTCCACATTCAA >CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus ------------ATGCTGCTGACTGTGGTCCTAAGTTTGGCACTTATTGCCTGTGATGCCAGTGCTACACGGCCTGAGTGTTTTGCTAATTCA---AACTTTCAGTTATACCCACGTAACCATACTGTTAACATTACTTCT---TTGTCTGTTAAC---------------------------GTGGCCAATTTGTTA---CTACCGGATCCTTATATAGCT------------------------------TATTCCGGTCAGACGTTACGACAAAATTTATTTATGGCTGATTTGTCTCGCACCATAATTTACCCTATAACACCGCCTGCTAAGGATAGT---ACTGGTGGT------------------------------TATATTTATAACACCACTATTTTACCTGTTGCGTCTGGT------CTGTTTGTGCATACATGGATGTACAGGCAAGAGTCTACCTCTAGGACGTAT---------------------TGTCAAGAACCTTTTGGTGTTGCATTTGGTGATACTTTTATCCAGGACCGCATCGCTATA---------------------------GTTATTATAGCCCCTGATAACCTAGGTTCATGGAATCAGGTTTCGTATCGTAACGTAACTACTGTACACTTAGTCGTGTGCAGTAATGCTACCTTGTGTATTAACCCTGGTTTCAATAGATGGGGACCAGCGGGT---------AATATTATAGCTTCCAATGCACTCGTC------GATCATTCGAACTCGTGCTTTGTGAACAATTCTTTT---AATGTGAGTATTAGTACTAGTAGGATT------------AATCTTGCTTTCCTTTTTAAAGATGGTGATCTTTTGATCTACCACTCTAATTGG---------TTGCCGAAGGGTAGTTTTGATTTTAATCAGAGCTTTCCT---------------TTACAATATTTTATGACTTTGCCGGTGGGCGGCAATTTACCGCGTGCCCAGTTTTTC------------CAGTCTATAGTTAGGCAGGGTGGTACTAATAATGGTGCAGACGATCGGTGCGTTGATTTTAATATTAGTTTGCATATAGCACATTTAGTTAATAGGGATTTGTTAGTTTCTTATTTTAATAATGGC---------------AGCGTCGCTAATGCGGCTGAC---------------------TGTGCCGAGAGTGCTTCGGAGGAGCTATACTGTGTTACAGGTTCATTC---------CAGCCACCTACCGGTGTATATCCTCTTAGTAGGTATCGTGCACAGGTAGAT---GGTTTTGTACGCGTAACTCAACGAGGCGACTATTGTCAGCCGCCTTACGCTGATCTTTTAGAACCACCACAA---CCGGTAGTG------TGGCGTCGTTTTATGCTCTATAAT---------------------------------------------------TGTGCATTTGACTTTAGTGTTGTTATTGATAACTTGCCTACACACCAATTGCAGTGTTATGGCATATCACCTAAGCGCCTGGCATCTATGTGCTACAGTAGTGTTACTATAGATGTCATGCGCATTAATGCTACG------------------CACTTGAATAATTTATTAAATCGAGTGCCTGATTCTTTTAGTTTGTAT---------------------------------------------------------------------AATTATGCTGTTCCTGACAAC---------TTTTATGGT---------------------------------TGTTTACATGCATTTTATTTGAATAGCACC---ACC---------------GCTTATGCTGTGGCGAACCGATTTCCCATCAAGCCGGGTGGTCGG---------------CAGAGTAATCGTGAT---------TATATAGCAACAGTGCTTAATGCTGCTCAT------------TACACT------------------ACA---------------------------TTT---TCCTATATTTTCGGTTTAGCT---------------------------------------------------GTTATAACGCTTAAACCTGCTTCTGGTAATAAACTGGTTTGT---------------------------CCAATAGCTAATGATACTGATATTATCACG------GAGCGCTGTGTTCAGTATAGTCTTTATGGTTATACGGGCACAGGCGTGTTATCTAAAAACACGTCTCTTACCGTACCTAACGGTAAGGTTTTTACAGCATCTAGTACGGGTGCTATTATAGGTGTGTTT------ATTAATGGCACTATGTACAGTATTACTCCATGTGTAACTGTGCCTGTGTCTGTAGGTTAT------CATGCCAATTTTGAGCGT---GTTTTATTATTTAATGGTTTGTCTTGTTCTCAGCGTTCACGTGCTGTATCTCGACCAGCATCTACATTA---TGGAATTTTTCCGTGTCGGATGAATCCGCT---------ATAGACACGCTATCTGGGTGTGTTGTAAATGCAATTTTGCATAATGATACTACTGTTAGTACATGCTCTATGCCTTTA------------GGCAACAGTTTATGTCTTATTAATGACACCACGGTTGCCATCGCTCATGCTGTTGGA---------CTACCCAAGTTGTATTTGGTTAATTATGATCCGTTGTATGATAATAATTCTGCAACACCTATTACGCCCGTTTATTGGGTGAAAATCCCTACTAATTTTACTTTAACTGCTACAGATGAGTTTATACAGACTAATGCTCCTAAAGTTACTATAGATTGCGCTCGTTATTTGTGTGGCGACTCATCGCGTTGTCTAAACATTTTATTGCATTATGGCACTTTTTGCGATGACATTAATAAAGCCCTTGCTAAAGTTAACACTATTTTAGATAGTGCATTGTTATCTTTGTCTAAGGAGCTTTCTATTAACACCCGTGATGAGATTCAGTCCTTTGCATTTGGTGGTGATTATAATTTTACTGGACTTATGGGTTGTTTGGGCCCTAATTGTGGTGCCACAACTTATAGGTCAGCGCTTTCTGATTTATTGTATGACAAGGTAAAAATTACTGACCCTGGTTTTATGCAGTCG---TACCAGAAGTGTATAGACTCGCAGTGGGGTGGTAGTGTGCGCGATCTTTTGTGCACGCAAACCTATAATGGTATAGCTGTTCTACCGCCCATTGTTTCTCCTGCTATGCAGGCGTTATATACTTCATTGCTTGTAGGTGCAGTTGCATCCTCTGGTTATACTTTTGGTATAACATCTGCAGGTGTTATACCTTTTGCTACCCAATTACAATTTAGGTTGAATGGTATAGGTGTTACTACGCAGGTGCTTGTTGAAAATCAGAAGCTTATAGCTTCTTCTTTCAACAATGCACTTGTTAATATTCAAAAGGGTTTTACT------------------------------------------GAGACTAGTATAGCTCTTAGTAAAATGCAAGATGTAATTAATCAACACGCCGCGCAATTGCAGACATTAGTTACGCAACTTGGTAATTCTTTTGGAGCCATTTCATCTAGTATTAATGAAATTTTCAGCCGACTTGAAGGTTTAGCTGCTAATGCTGAAGTCGATAGACTTATTAATGGTCGCATGATGGTTCTTAATACCTATGTGACCCAGCTTTTACTGCAGGCATCTGAGGCTAAGGCTCAAAATGCCTTAGCAGTTCAAAAGATTAGTGAGTGTGTTAAGGCTCAGTCACTACGTAATGATTTTTGTGGTAATGGCACCCACGTGCTAAGCATACCTCAGTTAGCGCCGAATGGTGTTTTATTTATACATTATGCGTATACTCCTACTGACTACGCTCTTGTACAGACTTCTGCTGGCCTTTGCTATAATGGTACT---------GGCTATGCTCCTTTGCGGGGCATGTTTGTATTACCCAATAAT---ACAAAC------------ATGTGGCATTTTACTAGTATGCAGTTTTATAATCCTGTTAATATTTCTTATAGTAATACTCAAATTCTTACTAGTTGTAGTATTAATTATACTAGTGTCAATTACTCGGTGTTACAGCCTAGTGCGCCCAGTGAT------TATGATTTTCAGAAAGAGTTTGACAAGTTTTATAAAAACTTGTCTACTAGTTTTAATAATACTTTTAACCCTAATGATTTTAATTTTTCTATGGTAGATGTTACTGCTCAGATTAGT------------------------------------------TCACTTCATCAAGTTGTTGATCAGTTAAACCAGTCTTTTATTGACCTTAAGAAGCTTAATGTTTATGAGAAGACCATTAAGTGGCCTTGGTATATTTGGTTAGCAATGATAGCGGGTATAGTAGGTCTTGTACTCGCTGTTATTATGCTTATGTGCATGACTAACTGTTGTTCATGTTTTAAAGGCATGTGC---GACTGTAGACGTTGCTGTGGTTCTTATGACTCATATGATGATGTGTATCCTGCTGTGCGTGTTAATAAGAAACGAACAGTA >CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus ------------ATGGTCGTCTTATTGTTCGTGATGTTTAGTTTAGTGGTAGCTGAC------------AGGCCTAATTGTTATTTGCCT------CAGTATTCTTACACTATTTCACCAGCAACCATCACTAACACCTCCTATTTTAATGTCAAT---------------------------CCCATTTCCATTGTT---GTCCCCGAGTTTTCAGTTGCG------------------------------CGCACCAACCTTGTTGTGCGCCAGCGTTTACAAGTTGCTGCTTATGAT---TTTACTAAGATACCCATTACACCGCCACACCGTAGT------------------------------------------------ATTTTTAATAACACTTATTTTCGTGTAGGCGATGGT------ATTTTAGTGAATACTCACATGTATCACAGAACTAACATAGCTACCAACTTAGGT---AGCTCCTTCTATGGTTGTCAAGAGCCTTTTGGTGCAGCCTTTGGCAACACTTTTGTTAATGAACCCATAACTTTA---------------------------GTTATGTTTTATGCAGGCAATGTTGGTAGTTGGTCTAGTCTTGTTACTCAGCAGCAAGCTAACATCACCATAGTGTCTTGTGATAACGCCACTTTGTGTGCTAACCCCTTCTTTCTAAGATGGGGTCCAGGTGTCATACGC---AGTTTTACTATAAGTAATGCATTTCAG------TGTCATGGTAATTATACATTTTATGACACTAAACTTGTTAATTTTACTGTTTCCACTGCTCGCTAT------------AATTTAGCTTTTACTTTTGCAGATGGTGACATTTTTATGTAC------TATGCT---------GCACTGGGTGATTCTTTGAATTTACCTACTGCTTACCCG---------------CTGCAGCCATATTTACGTATACCTGCTGGTTTTAAACCAGATGTTGTACAGTTTTTC------------CAGGCCATAACACGCCCC------AATGGTGAAAGTGCTGAAGTTGCTTGTGCTTCTAGCACCGTTTCTTGGTATGTGTCGCGGTTGTATTATAAAGAGCTACTGGTTGGTTATGATTCTTACAGT---------------AGTATCGTTAATGTTAGTTTT---------------------TGTTCTTCAGATGCTGAAAGTGAGTTGCAGTGCTTGTTGGGTACATTT---------GCGCCAGCTAATGGTGTTTATTCACTCAGTAATTTTCGTAGTAGTCCCACT---GACAATGTACGTATCACTAACAGTGCTTCTTCTTGTAGTGTACCTTATTCTGTTTTGAGTCGGCCACCTTTA---CCTTTTGTA------TGGAAGCGTTATGCCATTTCCAAT---------------------------------------------------TGTAAGTTTGATTTTCAGGCATTGCTTAGCCATTTGCCTACATTTCAACTTCGCTGTTTTGGCATATCGCCTACTAAGCTTGCCACTATGTGTTTTGGCACTGTCACTTTAGACATTATGTTGGTTAATGTTACT------------------CATTACAATAACCTCCTTAATGATGTTCCTGATGATTTTAGCCTTTAT---------------------------------------------------------------------AATTATCAATTACCGCGTAAT---------TTCTACGGT---------------------------------TGTTTGCATAGTTATTATTTACCTAATGAC---ACT---------------GCATTTAGTTATACTGTAGCTTCGCGCATACGTTACCCTTCTTGG---------------GTGCATTCTATCACACCTGGTGGTAGACAACCCGTTGGCCCTTTCTTAGATTCC------------TTACAAAGTTCCAGCAAG---CCTTGT---------------------------ACC---GGATCATGTTTAGGTTTAGCC---------------------------------------------------GTTATTTCTTTAAGTATAGCCTCGGCAAACAAATTAGTTTGT---------------------------CCAGTAGGCAATGACACAGATATTGTGCCT------GACACTTGTGTCAACTACAATATTTATGGTTATCAAGGCACTGGTGTTATTAGTAGG---TCAAATTACACTTTGCCCTCTTCTAAGGTTTTCTCGCTTAGTTCTTCTGGTGAGTTGACTGTCTTTGCA------GTTGGTTCTTCTTTTTACCAGCTATCTCCGTGTGCATTTGCTCCTATATCTGCAGCTTTT------TATAAGGGTTACACTACT---TCTTTGTTGTTTAATAACCTTCCTTGTTCCAACCGGCATCGTGCAGTCGTGGAACCTGTTAGTGCTTAT---TGGCGTCGTAGTGTTGCAGACAATAACACG---------TTTGACACAACTGCTGGGTGCATTTTTAATGCGTATAATTTAACTAGCATTGTAGTTAATCAGTGTGATTTACCTATT------------GGTGATAGTTATTGTTTACAACCATCCCTTATTAAGGGTTTTGAAGCCACATTATCA------------------------TTGGTTACGTACAACCCATTG------GCTGATTCTTTAACACCTATCACACCGGTTTATCAAGTTTCAGTGCCTACCAATTTTACTTTGGTAGCTTCTACTGAATATATTCAAACTTATGCATCAAAAATTTCTATTGATTGTGCTAAGTATTTATGTGGTGATTCTTCACAGTGCAGAACGGTGTTGTTGCAGTACGGCACATTTTGTAATGATGTTAATGTTGCTTTAACGAGGGTTTTTACGTTGCTTGACAATTCACTCGTTGATACGTTTTCATCCTTGAAGTCCACAGCACCAGTTCAG---------TTAGCTTATACGGGTGATTTTAATTTCACATCGTTAGTGGGCTGTATTGGTACTGATTGTGATTCTAAGTCACATAGGTCCGCTTTGTCAGATCTATTGTTTAGTAAGGTTAGTGTTGCTGACCCAGGTTTCATGCAATCT---TACCAACAATGTTTGGATGCACAGTGGGGTGGTAATATACGTGATTTGCTTTGTACTCAGACGTTCAATGGCATCTCAGTATTGCCACCCATTGTATCTCCTTCCATGCAGGCTCTCTATACGACCGCCTTAGTCGGTGGCATTGCAGCCTCTGGTTTTACTTTTGGTGTGTCATCTGCTGCTGTAATTCCTTTTGCCACACAGTTGCAGTTCAGACTTAATGGGTTAGGTGTGACCACTAATGTTTTAATGGAGAATCAACAATTGATAGCTAATGCTTTTAATAAGGCTCTTGTTTCGATACAGGAAGGGTTTACA------------------------------------------GCCACTAATCAGGCTCTAAACAAAATCCAAACTGTTGTCAATAACAATGCCTTGCAATTGCAAGTGTTAGTGCAGCAGTTGGGTAATACATTTGGTGCTATATCAGCATCTGTTAATGAAATTTTTAGCCGTCTCGACTTGTTGGAGGCTAATGCCGAAGTTGATAGGCTGATTTCTGGTCGTATGGTTGTACTTAACACATATGTGACTCAGTTGCTTATTCAAGCTTCTGAACTTCGGTCTCAGGCGGAATTGGCTAAGCAAAAGATGTCCGAATGTGTTAAGTCTCAATCTTTGCGTAATGACTTCTGTGGTAACGGGACTCATGTTCTTAGCATACCTCAGTTAGCTCCTAATGGCATGCTGTTCATACATTATAGTTATCAACCTACTAAGTATGCACAGGTGTATACCACGGCGGGCCTATGCTTCAATGGTACA---------GGCTTTGTTCCTAGGGATGGTTTGTTTGTCAGGGAAAACAATGAATCCCAA------------GTTTGGTATTTTACTAAGGCAAGTTTTTACAATCCTGTGAACTTGTCTTATGAGAACACTCATTTATTAGACACTTGTGGTGTTAATTACACTACAGTCAATAATAGTGTGTTGAACCCAATTGAACCTCCTAAT------TATAATTTTCAGGAAGAGTTCGATAAGTATTTCAAGAACCAGTCTTCTCAGTTTAATATCACTTTTGATTCTTCTCAGTTTAATGTTTCTATTGTTAATTTGAATGAACAGATGGCT------------------------------------------GCTTTAGATTCAGTCGTTAAGAGTCTCAATGAATCTTTCATTGACCTCAAGAAGCTAGGTGTGTACACGCAGCAACCAAACACACCCTGGTATGCGTGGTTAGGTATGATTGCAGGTTTAGTTGGACTCGCCTTAGCTGTTTTTATGCTTTGTTGCATGACCAACTGCTGCAGTGGATTCAGGGGCATATGC---TCTTGTAAGCAATGC------CAGTATGATGATTATGCTGACGTTTACCCAGCTGTTCGAGTTAGTGGTAAACGAACAGTA >CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus ------------ATGGTCGTCTTGTTATTCGCGATACTTAGTATCGCACTTGCTGAT------------AGACCATTATGCACTATTAATACTGGGAATTATGTTCTTAATCCCATTCAGGCCAACATTACTTATACAGTTGTTAATTCCATTAAT---------------------------CCTGTTTCTCTTGTT---GTTCCAGAATTTTCCATAGCG------------------------------CGGACTAATTTGGTTGTGCGTCAACGTTTGTATGTTGCT---GCTACGAATTTTACCAGAATACCAATTACCCCACCAGGTCGTGCC---------------------------------------------GTTATTTTTAATAATACTTATTTTGATGCTGAAGATGGG------TTTTTCGTTAATACTCACATGTACCACACTAATAATATTGCTACTAGTCCTAACAAACCTAATTTTTATGGTTGTCAGGAACCTTTTGGTGTTGCTTTTGGCAACACCTTTGAGAATGAACCCATTACTTTA---------------------------GTGATGGTTTATGCTGGTAATATAGGTAGTTGGACTAATACTGTAACACAGACTAGTGCCAACATTACTATAGTTTCATGTGACAATGCCACCTTATGTAGTAATCCGCTTTATTTGAGGTGGGGACCAGGTGGCTTGCCA---GGTTATGTTATAAAGGATGCTTTCCAT------TGTCATGGTGATTACACTTTTTATGATTCTAAAATCATCAATTTTTCCGTAGACTCGTCTCGCTAC------------AATTTTGCGTTCAGTTTTGCGGATGGTGATATTTTCATGTAT------TATGCC---------CCATTGGGTGATTCTCAGAATGTTGCTAAGGCTTTTCCT---------------TTGCAACCTTATCTGAGAATACCTGCTGGGTTTAAACCTAAGCGCGCTCAATTTTTC------------CAGGCAATCATCCGGAAA------ACTGCTGAAGATGCAGAGTTTCAGTGTTCGCGTTATACTACCTCATGGTATGTTTCCTATTTAAAGTACCATGAGTTGTTAGTGGGTTATGATGCTAATAGT---------------ATCATTTCTAATGTTAGTACA---------------------TGTTCTTTTGATGCGGAGAGTGAATTACAATGTTTGCTTGGAACGTTC---------ACCCCTGCTAATGGTGTTTATTCTCTTAGTAATTTTCGTAGTAGCCCTGTT---GATACAGTGCGTATCACTAATAGTGCCAAGGCTTGCAGTGTACCCTATAATCTTTTGGAGACCCCTCCATTA---CCTTTTGTT------TGGAAGCGTCATTCCATATCTAAT---------------------------------------------------TGTAAGTTTGATTTTCAGGCATTGCTTAGTCATTTGCCTTCATTTCAATTACGTTGTTATGGCATTTCCCCAACCAAGCTCTCCAGCATGTGTTTCGGAACTGTCTCTTTAGACGTTATGTTGGTTAATGTTACC------------------CATTACAATAATCTGCTTAATGATGTTCCAGATGATTTTAGTCTTTAT---------------------------------------------------------------------AATTATCAATTACCTCGCAAC---------TTTTATGGT---------------------------------TGTCTGCATAGCTATTACTTACCTAATAGT---ACT---------------ACATTCAATTACATCGTTGCGTCTCGTTCTCAGTCTCCATCCTGG---------------GTTTACAATATATCCCCGGGTGGTAGACAACCACCCAGTTCATTCCTAAACACG------------TTACCTGGCTCTGCTAAG---CCTTGC---------------------------CAG---GGATCTTGTTTAGGGTTGGCT---------------------------------------------------GTTATTTCACTGAGTGTTGCCTCTGCAAACAAACTTGTTTGC---------------------------CCGGTAGGCAATGATACGGATATTGTGACT------GGCAATTGTGTCAATTACAACATTTATGGTTATCAAGGTACTGGTGTTATTACCACT---TCTAATTACACCTTGCCATCCACTAAGGTCTTTTCACTCAGTGCTTCTGGTGAATTGACAGTCTTCTCT------GTGGGTTCTTCTTTTTATCAGTTGTCACCATGTGCTTTTGCACCTATATCTGCAGCCTTT------TATAAGGGTTATACCACT---TCTTTGCTTTTTAATAATTTGCCTTGTTCAGGCCGTAGTCGTGCTGTCGTGGAGCCCGTTAGTGATTAT---TGGCGGGCTAGTGTTGTTAACAATAGCACT---------TTTGACACTTCTGCTGGCTGCATCTTCAATGCTATTAATTCAACTAGCATTGTCGTCAACCAGTGTGATTTGCCAATT------------GGAGATAGTTATTGTTTACAACCTTCAACCATTAGCCGCCAGGGCTCTACTTTATTA------------------------TTAGTCACTTATGACCCTTTG------TCTGATACTTTGACCCCTATCACACCAGTTTATGAGATTTCGGTGCCTACCAATTTTACTTTGGTAGCGTCCACTGAGTACATCCAGACTTACGCATCAAAAATTTCCATTGATTGTGCTAAGTATTTATGTGGTGATTCTTCACAGTGTAGAACGGTGTTGTTGCAGTACGGCACATTTTGCAATGATGTTAATGTTGCTCTAACGAGAGTTTTCACTTTGCTTGATAATTCACTCGTTGATACATTTTCATCTTTGAAGTCCACAGCACCGGCTCAG---------CTAGCTTATACAGGCGATTTTAATTTCACCTCTTTAGTTGGCTGTGTTGGTACTGATTGTGATTCTAAGTCATATAGATCTGCTTTGTCTGATCTCTTGTTTAATAAGGTAAGTGTTGCTGACCCAGGTTTTATGCAGTCT---TACCAAAAATGTTTGGATTCACAGTGGGGTGGTAACATACGTGATTTGCTTTGCACCCAGACGTTCAATGGCATCTCAGTTTTACCACCTATCGTGTCCCCATCTATGCAGGCTCTTTACACTACAGCCTTAGTAGGCGGTATAGCAGCATCTGGCTTTACCTTTGGTGTGTCTTCTGCTGCTGTAATTCCTTTTGCCACACAGTTGCAGTTCAGACTCAATGGGTTAGGTGTGACTACTAATGTTTTAATGGAGAATCAACAATTGATAGCTAATGCTTTTAATAAGGCTCTTGTTTCGATACAGGAAGGGTTTACA------------------------------------------GCCACTAATCAGGCTTTAAACAAAATCCAAACTGTTGTTAATAACAATGCTTTACAATTACAGGTGTTAGTGCAGCAGTTAGGTAATACATTCGGTGCCATATCAGCATCCGTTAATGAAATTTTTAGCCGCCTTGATTTACTAGAGGCAAATGCCGAAGTTGATAGGCTGATTTCTGGGCGTATGGTTGTACTTAACACATATGTGACACAGTTGCTTATTCAGGCGTCTGAACTAAGGTCTCAGGCTGAATTGGCTAAGCAAAAGATGTCCGAATGTGTCAAGGCTCAATCCACGCGTAATGATTTCTGTGGTAATGGTACCCATGTTTTTACCATACCACAGTTAGCACCTAATGGCATGCTGTTCATACATTATAGTTATCAACCTACTAATTATGTACAGGTGTACACCACAGCTGGCCTTTGCTTTAATGGTACC---------GGCTTTGTTCCCAGGGATGGTTTATTTGTTAGGGAAAACAATGCATCTCAA------------TTATGGTACTTCACTAAGGCAAGTTTTTACAACCCTGTAAACTTGTCTTACGAGAATACTCGTTTATTAGATACCTGTGGTGTTAATTACACTACAGTTAATAATACTGTGTTGAACCCAATCGAACCTCCTAAT------TATGATTTTCAGGAAGAGTTCGATAAGTATTTCAAGAATCAGTCTTCGCATTTTAATATCACTTTTGATTCTTCTCAGTTTAATGTTTCTATTGTTAATTTGAATGAACAGATGGCT------------------------------------------GCTTTAGATTCAGTTGTTAAGAGTCTCAATGAATCTTTCATTGACCTCAAGAAGCTAGGTGTGTACACGCAGACTATCAAGTGGCCATGGTATGCGTGGTTAGGTATGATAGCAGGTCTAGTTGGTCTTGCTCTAGCTGTTTTTATGCTTTGTTGCATGACCAACTGCTGCAGTGGATTCAGGGGCATATGC---TCTTGCAGGCAGTGC------CAGTACGACGATTATGCTGATGTTTACCCAGCTGTTCGAGTTAGTGGTAAACGAACTGTA >JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus ------------ATGACACGCTTAATGTGTCTACTGATGTCCTTGTTAATTTTCGTAAGAGGCTGTGAAGCACAGTTTGTAGATATGAGTCCTGCTAGTAACAATAGTGAATGTTTAGACTCACAAGTTGATGCCGCTGCATTTTCTAAATTAATGTGGCCATATCCTATTGATCCGTCTAAAGTAGATGGTATTATA---TACCCCGTTGGTCGGACATAT------------------------------TCTAATATTACATTGTCATATACTGGCCTATTCCCATTGCAAGGAGATTTAGGTACACAGTATTTATATTCTGTGAGTCATGCTGTAGGTCATGATGGTGACCCTACAACAGCTTATATT------------TCTAATTATTCACTTTTGGTGAATGCTTTTGATAACGGTTTTGTTGTACGAATTGGTGCTGCAGCTAATTCAACTGGCACTATTGTAATCTCGCCGTCTGTCCAAACTAAGATTAAAAAGGCTTATCCT---GCTTTTATCTTAGGTTCATCTCTTACTAATACTTCTGCTGGTTTG------CCGTTGTATGCTAATTACAGCCTAACCATCATTCCTGATGGTTGTGGTACTGTCTTGCATGCTTTTTATTGTATATTACAACCCCGTACTCAGAACAGATGTCCTGGTAACGGTGGTTATAAG------GCTTATTTCGTATATGAAACTATTCATAATGATTGTGTTCCTGCTATTAATAAG------AAT------------------GCGTCTCTTAATTCTTTTAAGACA---TTTTTTGATCTTGTTAATTGCACTTTCTTTGATAGTTGGGATATCACCGCTGATGAAGTTAAGGAGTGGTTTGGTATCACCCAAGATACTCAGGGTGTACATCTTTACTCTTCTAGGAAAGGCGATTTGTATGGTGGTAAC---------------ATGTTTCGCTTTGCTACACTACCTGTG---------TATGATGCTATAAAATATTAC------------ACTGTCATACCCAGA------------AGTTTTCGGGCTAAGGCTAATAGAAGGGAGTCTTGGGCTGCCTTTTACGTGTATAAATTACATCAGCTGACTTACTTGTTAGATTTCTCAGTTGATGGT---------------TATATACGTAGGACTATAGAT---------------------TGTGGACATGATGATTTGTCACAGCTACACTGTTCTTATACATCTTTT---------GAGGTTGACACAGGTGTCTATTCTGTCTCTTCGTATGAAGCTTCAGCAACA---GGCACTTTTATTGAACAACCTAATGCTACTGAGTGT------GATTTTTCACCTATGCTTAAAGGTGTGGCA---CCTCAGGTTTATAATTTTAAAAGGTTGGTTTTTTCCAAC---------------------------------------------------TGTAACTATAATTTAACTAAACTCCTCTCTCTTTTTGCAGTCGATGAGTTTTCCTGTAATGGAATTTCACCTGATGCTATAGCACGTGGTTGTTATTCTACTTTAACAGTGGACTATTTTGCTTATCCACTTAGT------------------ATGAAATCGTATATTAGACCTGGTTCGGCCGGCAATATACCTTTATAT---------------------------------------------------------------------AATTACAAGCAGTCGTTTGCC---------AATCCAACC---------------------------------TGTAGGGTTATGGCATCTGTGCCTGCTAATGTTACCATTACTAAGCCTGAAGCTTACGGCTATATTTCTAAGTGTTCTCGCCTAACTGGTGATTATCAACATATTGAAACACCGCTTTATATTAACCCTGGT---GAGTACTCTATTTGTAGAGATTTTGCACCA------------TGGGGATTTTCTGAAGACGGTCAGGTTTTTAAGCGCACTCTTACTCAATTTGAGGGTGGTGGTCTCCTTGTAGGAGTCGGCACTAGAGTACCTATGACTGCA------------AACCTAGAAATGGGTTTTGTAATCTCTGTTCAATATGGTACCGACACTAATAGTGTGTGC------------------CCCATGTTGGATTTAGGTGAGTCTTCAACTATTACAAACCGTTTAGGTAAGTGTGTAGATTATTCACTCTATGGTGTTACCGGTAGAGGTGTTTTTCAAAAT---TGTTCTGCTGTTGGTGTTAAACAGCAGCGGTTTGTTTATGATAGCTTTGACAATTTAGTTGGTTATTAT---TCTGATGATGGTAACTACTATTGTGTCAGACCATGTGTTAGTGTGCCTGTGTCAGTTATATAT------GACAAAGACACAAATTTACATGCGACTTTATTTGGGAGTGTAGCTTGCGAGCACGTTACTACTATGATGTCACAGTTTTCACGTCTCACTCAGAGTAATTTGCGTAGACGTGACTCTAATGCC------CCTCTTCAAACAGCTGTTGGCTGTGTTGTGGGTCTTTCTAACAATTCGCTA---GTTGTTAGTGATTGTAGATTGCCTTTA------------GGTCAATCGCTTTGTGCAGTACCTCCTGTTACTTCTTTTAGAAGACGTAGTGCAAGT---------GAGTTTCAACTTGCTGTACTCAATTATACGTCACCCATTGTAGTGACACCTATTAAT------TCTAGTGGTTTCACCGCCGCCATTCCAACTAATTTTTCTTTTTCAGTTACACAGGAGTATGTTGAAACATCTATTCAGAAGGTTACTGTTGATTGTAAACAGTACGTCTGTAATGGCTTTAGTAGGTGTGAAAAGTTACTGGTTGAATATGGACAATTTTGTTCTAAAATAAACCAGGCTTTACATGGTGCTAATCTTAGACAGGATGAGTCTGTCTATAGTCTTTATAGTAATATTAAAACCACTTCTACTCAAACT---CTTGAGTATGGTTTAAATGGTGATTTTAATCTTACA---TTATTACAAGTACCGCAAATTGGAGGTTCTTCCTCTGGTTATCGTAGTGCTATTGAGGATTTATTGTTTGATAAGGTTACTATTGCTGACCCTGGTTACATGCAGGGT---TATGATGATTGCATGAAG---CAAGGCCCTCAATCTGCTAGGGATCTTATTTGTGCACAGTATGTGTCTGGTTATAAAGTTTTACCACCACTTTATGATCCTAATATGGAAGCTGCTTATACATCTTCACTATTAGGTAGTATAGCTGGTGCTGGGTGGACTGCTGGTCTTTCATCTTTTGCGGCTATACCTTTTGCACAAAGTATGTTTTATAGGTTGAATGGTGTTGGCATTACTCAACAAGTTCTCTCAGAGAATCAAAAGTTGATAGCTAACAAATTCAATCAGGCTTTAGGTGCTATGCAAACTGGCTTTACT------------------------------------------ACATCAAACCAAGCTTTTAGTAAGGTTCAAGATGCTGTAAATGCCAATGCACAAGCACTTTCAAAGTTAGCATCAGAATTATCTAATACTTTTGGTGCTATCTCTTCATCCATCAGTGACATCCTTGCTAGGCTTGACACTGTTGAACAGGACGCTCAAATTGATCGTTTGATCAATGGGCGTTTAACTTCTCTTAACGCATTTGTTTCGCAACAACTTGTGCGTTCTGAAACTGCTGCTAGATCTGCTCAGTTGGCTAGTGATAAAGTCAATGAGTGTGTTAAGTCACAATCCAAGAGAAATGGCTTTTGCGGGTCTGGCACTCATATAGTATCATTTGTTGCTAATGCTCCAAATGGTTTTTATTTCTTCCATGTAGGTTATGTTCCTACTAATTTTACTAATGTTACAGCAGCATATGGCTTATGTAACAATAATAATCCGTTATTGTGCATAGCACCTATTGATGGGTATTTCATTACTAATCAAACTACCACTTATAGTATTGATACCGAATGGTATTATACAGGTAGTTCTTTCTTTAAACCTGAACCTATTACTCAGGTTAATTCACGTTATGTTTCCAGT---GACGTGAAATTTGAAAAGCTTGAGAATAACTTACCACCTCCTCTCCTTGAGAATTCCACTGATGTGGATTTTAAGGATGAGTTGGAAGAATTTTTCAAGAATGTTACCTCGCATGGTCCTAACTTTGCAGAGATATCTAAGATTAACACTACACTGCTTGACCTTTCAGATGAGATGGCA------------------------------------------ATATTGCAGGAAGTTGTTAAACAATTAAATGATTCCTACATTGATCTTAAAGAATTGGGGAATTATACTTATTATAACAAGTGGCCATGGTATATATGGCTCGGTTTTATTGCAGGCCTTGTTGCCTTGTTACTTTGTGTCTTTTTCCTGCTATGCTGTACTGGTTGTGGTACTAGCTGCTTAGGAAAAATG---AAGTGTAGGAATTGTTGTGATTCTTATGAAGAC---------------------TTTGATGTCGAAAAGATTCATGTTCAT >JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus ---------ATGTTTATTGTATTTCTCATTAGTTACACAACTTTTCTCATTCCTTAT---------------------------------------ACAGCTACAACAACATGTTTCTCAGGGCCTACAATAGAGAATAAG---TTGAACATATCC---------------------TCAGGTAGTAGGGGTGTTTAT---TACCCTGATGACATTTTTCGT---------------------------TCC---AATGTTAGTGTGTTGGTGACAGGACGTTTCCTTCGCTTTAACACCACTCTTACGTGGTACAAT------------------TCA---------TGGAAC------------------------------CAGGCTTATTCTTCACCTGTCTTGCCTTTTGGGCATGGT------GTTTACTTTTCAACC------ATTGACAAATCCAATGTTGTCAGAGGTTGG------------------------------------------ATTTTTGGAACCACGTTAGATAACACCACTCAATCCGCA---------------------------TTGCTTGTG---------------------------------------AACAATGGTAGTGCTATTACAATAGAAGTCTGT---TACTTCCAATTTTGTGACAACCCTGCCTTTATAATTAGTGGCGGTGCACAAACAAAC---ACTGCTATCTATATCAACTTACGTAAT------TGTACATATGTGGATACACTACGTGACTTACCATTA---AGTTTTGAGGATGTTGATGGTGGTTTTAAACACTTACGTGAGTTTGTATTCAAGAATAGTGATGGGTTTTTGCACATTTATGGTGCTTACCAG---------CCTTACGACTTAGCCATAGGTGCTACGGCTGCACTACCAGCTCAATTCCTGCCTTTAAAGCCCCTATGGAAACTGCCCCTCGGTTTAAATATTACTAATTATAAGGTTGTG------------ACAACTTTAAAACCC------------------------------ACAAATCAGGCCTTCCAAGCTGCTTATATAGTGGGTAACTTAAAACATACAACTATGATGTTGTCTTTTAATGAAAATGGC---------------ACTATGTCCAATGCTATTGAT---------------------TGTTCTCAGGACCCATTGGCTGAGCTAAAGTGCACACTCAAGCAGTTT---------GATGTAGGTAAAGGTATTTACCAAACGTCAAACTTCCGAGTTCAACCTACTGTTGATGTTGCGCGCTTTCCAAATATTACTAACGTGTGT------CCTTTTGACAAGGTTTTTAATGCTACACGCTTTCCTAGTGTCTATGCGTGGGAAAGAACAAAGATTTCCGAT---------------------------------------------------TGTGTTGCAGATTACACTGTTTTCTACAACTCAACTTCTTTTTCGACTTTCAACTGTTATGGAGTGTCTCCTTCTAAGTTGATTGATTTGTGTTTTACAAGTGTGTATGCAGATACATTTTTGATAAGATTTTCC------------------GAAGTCAGACAAGTAGCACCTGGTCAGACTGGTGTTATTGCAGACTAC---------------------------------------------------------------------AATTATAAACTACCTGATGAC---------TTTATAGGT---------------------------------TGTGTTATAGCTTGGAACACAGCCAAGCAA------------------GACGTCGGTAGCTATTTTTATAGGTCCCATCGTTCTAGCAAATTAAAA---------------CCCTTTGAAAGAGACCTTTCATCAGAAGAAAATGGTGTCCTTACACTTAGTACC------------TATGATTTTAATCAAAATGTACCTCTT---------------------------GAG---TACCAAGCCACTAGAGTCGTT---------------------------------------------------GTTCTTTCCTTTGAACTTCTTAATGCACCTGCTACAGTGTGT---------------------------GGACCAAAGTTATCCACTCCATTGGTTAAG------AACCAGTGCGTCAACTTCAACTTTAATGGACTTAAAGGTACTGGTGTGTTGACTGAC---TCGTCCAAAACGTTTCAGTCTTTTCAGCAGTTTGGTCGGGACGCATCTGATTTTACTGATTCTGTGCGTGACCCGCAAACTTTACAGATACTTGACATTTCACCGTGCTCTTTTGGTGGTGTAAGTGTCATAACACCAGGAACTAACACTTCATCTGCAGTGGCTGTTCTTTACCAAGATGTAAACTGCACTGATGTTCCTACAACAATACATGCAGATCACTTAACACACTCTTGGCGTGTTTATACCACTGGACCCTATGTT---------TTCCAAACACAAGCAGGGTGCCTTATAGGAGCTGAACATGTCAAC------GCATCCTATCAGTGTGACATTCCAATT------------GGTGCTGGCATTTGTGCTAGCTATCATACAGCCTCACTTTTACGGAGTACAGGTCAA------------------AAATCTATTGTGGCCTATACTATGTCATTAGGTGCTGAAAATTCTGTGGCATATGCTAATAATTCA---ATTGCCATACCTACTAATTTTTCTATTAGTGTCACTACTGAAGTGATGCCTGTTTCTATGGCTAAAACATCTGTCGATTGTACTATGTACATCTGTGGTGATTCTTTAGAGTGCAGTAACCTACTGCTTCAGTATGGTAGCTTCTGTACCCAACTCAATCGTGCCCTTTCTGGCATTGCTGTTGAACAGGACAAAAATACCCAAGAGGTGTTTGCCCAGGTTAAACAGATGTATAAAACACCA---ACCATAAGAGATTTTGGTGGT---TTTAATTTCTCTCAGATATTA------------CCAGACCCTTTGAAGCCTACTAAGCGTTCTTTTATAGAGGATTTGCTCTATAACAAAGTAACACTCGCGGATGCTGGTTTCATGAAACAG---TATGCAGACTGTTTG---------GGTGGTATTAACGCAAGAGATCTCATCTGTGCTCAAAAGTTTAATGGGCTGACAGTCTTACCACCTTTGCTCACTGATGACATGATTGCTGCCTATACTGCAGCGCTCATTAGTGGCACTGCCACTGCAGGCTGGACTTTCGGTGCAGGTGCAGCCCTTCAAATACCTTTTGCTATGCAAATGGCTTATAGGTTTAATGGCATTGGAGTTACTCAAAATGTTCTCTACGAGAACCAAAAACAAATTGCCAACCAGTTCAATAAGGCTATTACTCAAATTCAAGAATCACTCACA------------------------------------------ACTACAGCGACAGCGCTGGGCAAGCTGCAAGACGTAGTCAACCAGAATGCTCAAGCATTAAATACACTTGTCAAACAACTTAGCTCCAATTTTGGTGCTATTTCAAGTGCTTTGAATGATATCCTCTCACGACTTGACAAAGTTGAGGCAGAGGTGCAAATTGACAGGTTGATTACAGGCAGATTACAAAGCCTCCAAACCTATGTAACACAACAACTAATCAGAGCTGCTGAAATCAGGGCTTCTGCTAATCTTGCTGCTACCAAAATGTCTGAGTGTGTTCTTGGACAATCTAAAAGAGTTGATTTTTGTGGAAAAGGCTATCACCTTATGTCTTTCCCTCAATCCGCTCCACATGGTGTTGTGTTCTTACATGTCACTTATGTGCCAGCACAAGAAAAGAACTTCACTACTGCCCCAGCAATTTGTCATGAAGGCAAG---------GCATACTTCCCTCGTGAAGGTGTGTTTGTATCTAATGGCAGT---------------------TCTTGGTTTATTACACAGAGGAATTTTTATTCGCCACAGATAATCACAACAGACAATACATTTGTCGCCGGAAGTTGTGATGTCGTCATTGGAATTATTAATAATACAGTTTATGATCCTCTGCAACCTGAGCTT------GACTCATTTAAACAAGAGCTAGATAAGTACTTCAAAAATCATACATCACCTGATGTTGATCTTGGCGACATTTCAGGCATCAATGCTTCTGTCGTCGATATTCAAAAAGAAATTGAC------------------------------------------CGCCTCAATGAGGTTGCCAAAAATTTAAATGAATCACTCATTGACCTTCAAGAACTTGGCAAATATGAGCAATATATTAAATGGCCTTGGTATGTCTGGCTTGGCTTTATAGCAGGGTTAGTAGGATTATTTATGGCCATCATTCTTCTTTGTTACTTTACTAGCTGCTGTAGCTGCTGTAAAGGCATGTGC---TCCTGTGGTTCTTGCTGC---AGATTTGATGAA---GACGACTCTGAGCCAGTGCTCAAAGGAGTCAAATTACATTACACA >Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus ------------ATGAAAATTTTAATTTTTGCTTTCCTAGTTACCCTAGTT---------------------------------------------AAAGCACAAGAAGGTTGTGGCGTGATCAACCTCAAGACACAACCTACATTAACACAAGTC------------------TCCTCCTCGCGTAGAGGTGTTTAT---TATAATGATGATATATTCCGT---------------------------TCT---GATGTTTTACATCTCACGCAGGATTATTTCTTACCATTCCATTCTAACCTAACACAGTACTTTTCTCTTAATATTGAGTCAGAT---------AAAATT------------------------------GTTTATTTTGACAATCCCATATTGAAATTTGGTGACGGT------GTTTACTTCGCAGCC------ACCGAAAAGTCTAATGTAATAAGAGGCTGG------------------------------------------GTGTTTGGTTCCACTTTTGACAACACCACTCAGTCTGCT---------------------------ATTATAGTC---------------------------------------AATAATTCCACACACATTATTATACGTGTGTGC---TATTTTAACCTCTGTAAAGATCCCATGTATACCGTGTCTGCTGGCACCCAAGTGTCC---TCATGGGTTTACCAGAGTGCTTTCAAT------TGCACATACGATAGAGTGAAAAAAAGCTTCCAACTA---GACACATCCCCTAAGACTGGTAATTTTACTGACTTACGTGAGTTTGTCTTTAAAAATCGTGATGGGTTTTTCACTGTTTACCAGACTTATACC---------CCAGTTAACCTCCTTAGAGGTTTGCCATCAGGTCTTTCAGTT------------TTAAAACCCATTCTTAAATTACCGTTTGGAATTAATATTACTTCTTTTAGAGTGGTT------------ATGGCAATGTTCAGC------------------AAAACCACTTCTAATTATGTGCCAGAAAGTGCTGCTTATTATGTGGGCAATCTTAAACAGTCCACTTTTATGCTCAGCTTTAATCAGAATGGA---------------ACTATTGTAGATGCTGTGGAT---------------------TGTTCTCAAGATCCACTTGCAGAGTTAAAGTGTACTACAAAAAGTTTT---------AATGTCTCCAAAGGCATTTATCAAACTTCCAATTTCAGAGTATCACCAGTTACTGAGGTTGTTAGATTTCCAAATATTACAAATCTCTGT------CCTTTTGACAAGGTTTTTAATGCCACACGCTTTCCTAGTGTCTATGCCTGGGAAAGAACTAAGATTTCTGAT---------------------------------------------------TGTGTTGCAGATTACACTGTTTTCTACAACTCAACTTCTTTTTCGACTTTCAACTGTTACGGAGTCTCTCCTTCTAAGTTGATTGATTTGTGTTTTACAAGTGTGTATGCAGACACATTTTTGATAAGATTTTCA------------------GAAGTCAGACAAGTGGCACCTGGTCAGACTGGTGTTATTGCAGACTAC---------------------------------------------------------------------AATTATAAACTACCTGACGAC---------TTTACAGGC---------------------------------TGTGTTATAGCTTGGAACACTGCTAAGCAA------------------GACGTCGGTAGCTATTTTTATAGGTCTCATCGCTCTAGCAAATTAAAA---------------CCCTTTGAAAGAGACCTTTCATCAGAAGAAAATGGTGTCCGTACACTCAGTACG------------TATGATTTTAATCAATATGTACCTCTT---------------------------GAG---TACCAAGCCACTAGAGTTGTT---------------------------------------------------GTTCTTTCATTTGAACTCCTCAATGCACCTGCTACAGTGTGT---------------------------GGACCAAAATTATCCACTTCATTGGTTAAG------AACCAGTGCGTCAACTTCAACTTTAATGGATTTAAAGGTACTGGTGTGTTGACCGAC---TCGTCTAAAACGTTTCAGTCTTTTCAGCAGTTTGGTCGGGATGCATCTGATTTTACTGATTCAGTGCGTGACCCGCAAACTTTACGGATACTTGACATTTCACCGTGCTCTTTTGGTGGTGTGAGTGTCATAACACCAGGAACTAACACTTCATCTGCAGTGGCTGTTCTTTACCAAGATGTAAACTGCACTGATGTTCCCACAACATTACATGCAGATCAATTAGCACCCTCTTGGCGTGTTTATACCACTGGACCCTATGTT---------TTCCAAACACAAGCAGGGTGCCTTATAGGAGCTGAACATGTCAAC------GCATCCTATCAGTGTGACATTCCAATT------------GGTGCTGGCATTTGTGCTAGCTATCATACAGCCTCACTTTTATGGAGTACAGGTCAA------------------AAATCTATTGTGGCCTATACTATGTCATTAGGTGCTGAAAATTCTGTGGCATATGCTAATAATTCC---ATTGCCATACCCACTAATTTTTCTATTAGTGTCACTACTGAAGTGATGCCTGTTTCTATGGCTAAAACATCTGTCGATTGTACTATGTACATCTGTGGTGATTCTTTAGAGTGCAGTAACCTACTGCTTCAGTATGGTAGCTTCTGTACCCAACTTAACCGTGCCCTTTCTGGCATTGCTGTAGAACAGGACAAAAACACCCAAGAGGTGTTTGCCCAGGTTAAACAGATGTATAAAACACCA---ACTATAAGAGATTTTGGTGGT---TTTAATTTCTCTCAGATATTA------------CCAGACCCTTTGAAACCTACTAAGCGTTCTTTTATAGAGGATTTGCTCTACAACAAAGTAACACTCGCGGATGCAGGCTTCATGAAACAG---TATGCAGACTGTTTG---------GGTGGTATTAACGCAAGAGATCTCATCTGTGCTCAAAAGTTTAATGGACTCACAGTCTTACCACCTTTGCTCACTGATGACATGATTGCAGCCTACACTGCTGCGCTCATTAGTGGCACTGCCACTGCAGGCTGGACTTTCGGTGCAGGTGCAGCCCTTCAAATACCTTTTGCTATGCAAATGGCTTATAGGTTTAACGGCATTGGAGTTACTCAAAATGTTCTCTACGAGAACCAAAAACAAATTGCCAATCAGTTCAATAAGGCTATTACTCAAATTCAAGAATCACTCACA------------------------------------------ACTACATCGACAGCATTGGGCAAGCTGCAAGACGTAGTCAACCAGAATGCTCAAGCATTAAATACACTTGTCAAACAACTTAGCTCCAATTTTGGTGCTATTTCAAGTGCTTTGAATGATATCCTCTCACGACTTGACAAAGTTGAGGCAGAGGTGCAAATTGACAGGTTGATTACAGGCAGATTACAAAGCCTCCAAACCTATGTAACACAACAATTAATCAGAGCTGCTGAAATCAGGACTTCTGCTAATCTTGCTGCTACTAAAATGTCTGAGTGTGTTCTTGGACAATCGAAAAGAGTTGATTTTTGTGGAAAAGGTTATCACCTTATGTCTTTCCCTCAATCCGCTCCACATGGTGTTGTGTTCTTACATGTCACTTATGTGCCATCACAAGAAAGGAACTTCACCACTGCCCCAGCAATTTGTCATGAAGGCAAA---------GCATACTTCCCTCGTGAAGGTGTGTTTGTATCTAATGGCAGT---------------------TCTTGGTTTATTACACAGAGGAATTTTTATTCACCACAGATAATCACAACAGACAATACATTTGTCGCCGGAAGTTGTGATGTCGTCATTGGAATCATTAATAATACAGTTTATGATCCTCTGCAACCTGAGCTT------GACTCATTTAAACAAGAGCTAGATAAGTACTTCAAAAATCATACATCACCTGATGTTGATCTTGGCGACATTTCAGGCATCAATGCTTCTGTCGTCGATATTCAGAAAGAAATTGAC------------------------------------------CGCCTCAATGAGGTTGCCAAAAATTTAAATGAATCACTCATTGACCTTCAAGAACTTGGCAAATATGAGCAATATATTAAATGGCCTTGGTATGTCTGGCTTGGCTTTATAGCAGGGTTAGTAGGATTATTTATGGCCATCATTCTTCTTTGTTACTTTACTAGCTGCTGTAGCTGCTGTAAAGGCATGTGC---TCCTGTGGTTCTTGCTGC---AGATTTGATGAA---GATGACTCTGAGCCAGTGCTCAAAGGAGTCAAATTACATTACACA >PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus ---ATGACGTACTCAGTGTCTCTACTGATGTGCTTGTTAACTTTTATAGGGGCAAAC------------GCTAAAATTGTGTCGATACCTGGTGGTGTCGGTACTGGAGCTTGTCCCCAGGTTGATATGCAGCCCAGTTATTTTATAAAGCATAACTGGCCTGAACCTATTGACATGAATAAGGCAGACGGTGTCATC---TACCCAAATGGCCGCACTTAT------------------------------TCTAACATCACATTACAGACCACTAATCTGTTTCCTCGTAATGGTGATTTAGGCACTCAGTATGTCTATTCAGCATCTAATGAGAAAAGCCGCACTAGCAATGTGGCTTTTATT------------------AGTAATTATTCATACTATGGCAATCCCTTTGGCGACGGCATTGTCATACGTATAGGTCAAAATTCTAATAAGACTGGTAGTGTCATTGTGGGCACAGCACAGACTACTATTAAAAAGATCTACCCAGCT------CTTATGCTTGGTAGTTCTTTTGGCAATTTCTCTGTTAATAATAAGTCAGGTGCTTATTTTAATCACACCCTTCTTATCTTACCTAGCAAGTGTGGCACTGTATTTCAGGTGGCATACTGCCTTCTACAACCAAGGACTGACTCTTATTGTCCCGGTAATGCTAACTATGTT------AGCTATGCACTCATTGATTCTCCTACG---GATTGTACATCTGCGGATGAATCTAAACGTAGG------------------AATGGTCTTGAGGACATTAAAAAG---TACTTCAATTTGGTCAATTGTACCTATTTTGAAGAGTTTAATGTCACAGCTGACGAGCGTGCAGAGTGGTTTGGCATCACCCAAGATTCTCAGGGTGTGCACCTCTACACCTCTCGTAAAAATGGTTTCAATTCAAATAAT---------------CTCTTTTTATTTGCTTCTGTGCCCATT---------TATGATAAGATCAATTACTAC------------ACTGTAATTCCTCGC------------TCAATAATAACTCCTGCCAACCAGCGTTCTGCTTGGGCAGCATTTTATGTATATCCTTTACACCAACTTAGCTACTTGCTAAATTTTGATGTTAATGGT---------------TATATTACGCAAGCAGCAGAC---------------------TGTGGTTACAATGATTATACCCAGCTTGTCTGCTCGTATGGTGATTTT---------AATATGAAATCTGGTGTTTACTCTACTTCATATTATTCAGCCAAACCTGTA---GGTGCGTACTATGAAGCTCATGTTTACCCAGATTGC------AATTTTACTGATTTGTTCCGGGAAAATGCT---CCCACAATCATGCAATATAAGCGTCAAGTTTTTACGCGT---------------------------------------------------TGTAATTACAACCTCACACTACTGCTCTCTCTTGTGCAGGTGGATGAGTTTGTCTGCGATAAGATTACCCCTGAGGCTCTTGCAACAGGGTGTTATTCGTCTCTTACCGTCGATTGGTTTGCATTTCCGTATGCT------------------TGGAAGTCATACCTAGCTATAGGTTCAGCAGATCGCATTGTGCGGTTT---------------------------------------------------------------------AATTATAACCAGGATTATAGC---------AATCCCTCT---------------------------------TGTAGAATTCACTCCAAGGTGAATTCTTCAGTTGGCATTTCTTACTCTGGTTTATATAGTTATATTACTAATTGTAATTACGGCGGCTTCAACAAGGATGACGTTGTTAAGCCTGGTGGTCGTGCCAGTCAACCCTGTGTTACTGGCGCACTCAATTCACCTACTAACGGTCAAGTCTGGTCTTTTAATTTTGGTGGCGTCCCT---------------------------------TACAGAACCTCCCGCCTCACCTACACTGACCATCTTAAAAAC------------CCTCTAGATATGGTTTATGTCATCACTGTTAAGTATGAACCAGGCGCTGAAACTGTATGT---------------CCCAAACAAGTGCGTCCTGATTATAGTACCAATATTACTGGCTTATTAGGCTCTTGTATCAGTTATGACATTTATGGTATAACTGGTACTGGTGTTTTCCAGCTG---TGTAATGCAACTGGAATTCCTCAACAAAAGTTTGTCTATGACAAATTTGATAATATAATTGGCTTTCAC---TCTGATGACGGCAATTATTATTGTGTGGCACCTTGTGTCAGTGTGCCTGTTTCTGTTATATAT------GATGACAACACTAATCAATACGCCACATTGTTTGGCAGTGTTGCTTGTCAACATATATCTACAATGGCTGCTCAGTTTTCTCGTGAAACTCGTGCTTCCCTCGTTTCAAGAAATATGCAGAAT------CTTCTACAGACTTCTGTCGGTTGTGTCATGGGTTTCCATGAAACTAATGAC---ACCGTTGAAGACTGCAATCTTTCTTTG------------GGACAATCACTCTGCGCAATCCCACCTAACACCAACTTGAGGGTTGGTCGCTCCACC------------TTTGGATTAGGTTCTTTAGCCTACAACAGTCCATTGCGTGTTGATGCACTTAAC------TCCTCTGAGTTTAAGGTCTCCTTGCCTCTCAATTTTACATTTGGTGTTACTCAGGAATATATTGAAACTAGCATACAGAAGATTACAGTTGACTGTAAACAGTACGTGTGCAATGGTTTTGCTAAGTGTGAAAAGCTGCTCGAACAATACGGTCAGTTTTGCTCTAAAATTAACCAGGCTCTCCATGGCGCGAATCTTCGCCAGGATGACTTTGTTCGTAATCTGTTTGAGAGTGTTAAAACACCACAGACAGTTCCT---CTTACTACAGGTTTTGGAGGGGAGTTTAATCTTACT---CTTCTAGAGCCGCTTTCTGTTTCTACAGGTTCTTCTAATGCGCGTAGTGCTTTGGAAGAGCTTTTGTTTGACAAAGTCACTATAGCTGATCCTGGCTACATGCAAGGT---TATGATGACTGCATGCAA---CAGGGCCCTGCCTCAGCTCGTGATCTTATCTGTGCTCAATATGTTGCTGGCTACAAAGTGTTACCACCCCTTATGGATGTTAACATGGAAGCTGCATACACCTCTTCTTTGCTTGGTAGCATAGCTGGTGCTGGCTGGACTGCTGGTTTATCATCATTTGCTGCCATTCCATTTGCACAGAGTATATTTTACAGGTTAAATGGTGTTGGTATAACACAACAGGTTCTATCTGAGAATCAAAAGATTATTGCTAACAAGTTTAACCAAGCTCTTGGTGCCATGCAAACTGGTTTCACA------------------------------------------ACAACTAATGAAGCTTTTCAGAAAGTTCAAGATGCTGTGAACACTAATGCACAGGCTCTAGCTAAGTTGGCTAGTGAACTATCCAATACTTTTGGTGCTATTTCTTCTTCCATTGGTGACATCATTCAACGTCTTGATGTGCTTGAACAGGAAGTCCAAATAGACAGACTTATTAATGGCCGTCTGACTACACTCAACGCCTTTGTTGCTCAGCAGCTTGTTCGTTCTGAATCTGCTGCTCGTTCTGCACAATTGGCTAAGGATAAAGTCAATGAGTGTGTTAAATCACAATCCACTAGATCTGGATTTTGTGGTCAAGGCACTCATATAGTGTCCTTTGTTATTAACGCCCCTAATGGCCTCTACTTTATGCATGTTGGTTACCACCCTAGCCAACATATTGAGGTTGTTGCTGCCTATGGTCTTTGTGACGCGGCCAACCCCACTAATTGTATAGCCCCAGTTAATGGCTACTTTATTAAAAATCAAACT---ACTAGGGGTGTTGAT---GATTGGTCATATACAGGTTCTTCCTTTTATGCTCCAGAACCCATCACCACTCTTAATACTAGGTATGTCGCACCT---CAAGTGACATTCCAAAACATTTCTACTAACCTTCCTCCTCCTCTGTTGGGCAATTCCACTGGAACTGACTTCAAAGATGAGTTGGATGAATTTTTCAAGAATGTTAGCACCAGTATACCAAATTTTGGTGCTCTAACACAAATTAATACTACTTTATTGGATCTTTCCGATGAAATGCTA------------------------------------------GCTTTACAGCAAGTTGTCAAAGCGCTTAATGAGTCATATATTGACCTTAAAGAGCTCGGCAACTATACTTATTACAACAAATGGCCTTGGTACATTTGGTTGGGTTTCATTGCTGGACTTCTAGCCCTAGCCCTTTGTGTTTTCTTTATTCTTTGCTGCACTGGTTGCGGCACAAGTTGTTTAGGAAAACTT---AAATGTAATCGTTGTTGTGACAAATATGAAGAATACGAC---------------CTTGAGCCGCATAAAATTCATATTCAC >Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus ------------ATGACCCACTTAATGTTTCTACTGATGTTCTTGTTAACACCTATA------------AGAGGAGATGTTGATCTCGGTCCTGATTCCACTAGGGATACTTGTGATGAAGTAGTTGTTCAGGTTTCAGCC---TTTCAAAAAGACTGGCCTCAACCAATAAACCCTCTGTTTGCTGATGGTATCATA---TATCCAACAGGGCGGTCCTAT------------------------------TCTAATATTTCATTATCCTATCAAGGTTTGTTCCCAAGACAAGGTGATTTGGGCCGCCAATATATTTACTCCGTTACTCATGCTGGGGATTCTACATTGTATCCCCCTCAGGGTATAGGTAAGCATTTTATTTCCAATTATAGCGCTGAAACGCTGCCTTTTGGCAATGGTTTCGTCGTTAGAATTGGCTTTTCTGCTAATAAGACGGGCTCTCTTGTCATTTCACCGACGACGTCCAAAGTAATAAAGAAGATTTATCCT---GCCTTTATGCTTGGTACCGCCGTCACATCTTTTGCTCACGGTCAT---GCTGGCCGTTATTTAAACCACACACTCGTTATCTTACCTGAGTCGTGTGGCACGTCATTGACAGTCTTCTACTGTATTCTCGAACCACGCAACGGCACTAGGTGTCCTAATCACCAGGATTACACA------TCCTACGTGATTTGGGAAACACCTCATCTTGATTGCGGTAGCTCCGTTAATAGA------AAT------------------GCTACCTTAAATTCTTTTAAAGTG---TCCTTCAACTTGCGCCAGTGCAAGTTTATGCGCACTTATAATATTAGTGATGACGAAAACCAAGAATGGTTTGGTATCACCCAAAATGCGCAAGGTGTACACCTTTACTCCTCTAGAAAAGGGGACCTGTATGGTGGTAAC---------------ATGTTCCTCTTTGATACTCTACCTGTG---------TACGAGACTCTTAAGTATTAC------------ACAGTTATACCGCGC------------AGTCTACGTTCCAGACTCAATGAGAGACAGGCTTGGGCTGCTTTTTATGTGTACAGTCTCCACAAGCTAACATATTTGTTAGACTTTTCTGTGGATGGC---------------TATGTGCGCAGAGCTATAGAT---------------------TGTGGCTACGATGATGTGGCGCAACTCTTTTGTTCGTATGAGTCTTTC---------GATGTCGACTCTGGAGTTTACTCTGTGTCTTCATTCGAAGCCCAACCTCGC---GGTTACTTTGTGGAGCAGCCTCATAGTTCAGAGTGT------GACTTCTCAGCTATGTTTTCATCGCAGCCT---CCACAAGTTTATAATTTTAGCAGGTTAGTTTTTACTAAC---------------------------------------------------TGCAATTATAATTTAACGAGGCTTCTCTCGCTTTTTCAAGTTAGCGAATTCTCTTGTCATCAAGTGTCCCCTAGTGCTCTCGCATCCGGGTGCTATTCTTCATTAACCGTAGATTATTTTGCCTACCCTCTAAGT------------------ATGGCATCATACCTACGGCAAGGATCTACGGGCCCTATAGCCCAATTT---------------------------------------------------------------------AACTACAAGCAGGACTTTACT---------AATCCTACT---------------------------------TGTAGGATTTTAGCTGCCGTTCCCTCAAATGTTACAATTCCACTGCCGCAGAGTTACATGTGGCTAACGCAGTGCTATACTAACTCTCCTTCCAAT---------------TCTCATTATGTTGAGGCTGGT---TCTTACACGCCATGTCTTGGTTTAGCTAGC------------CGTGGTTTCAACACCTTTAATAGTATG---------------------------CACTATGATCCCGCCACTGGTCTTACTGCTACTGGTTCCTACCAATACATTTCTGAAGAAGCATTGGAAATGGCTTTTATCATATCAGTCCAGTATGGGACAGACTCTAATAGTGTCTGT------------------CCACTACAGGCTGTTCATAATGACACCAAAGTTGACGATAAACTTGGTCGTTGCATTGAATATTCACTCTACGGTGTTACAGGTAGAGGTGTTTTTCAAAAT---TGCACGCCTGTTGGTTTAAAGCAGCAGCGGTTTGTTTATGATGGGTTTGACAATCTTGTAGGTTACCAT---TCTGACAATGGTAATTACTACTGTGTCCGCCCATGCGTAAGTGTGCCAGTCTCTGTTATATAT------GACAAGGCTACTAATAATCATGCAACATTGTTTGGCAGCGTCGCTTGTGAACACGTTGACACAATGATGTCTCAGTTCTCCCGTATGACCCAGTCCAGGTTACGGGTCCGTAATATTGACGATGCTGGCCCAATGCAAACCTCCGTAGGTTGCGTTGTGGGGCTTGTCAATACATCGTTA---ATAGTTGACAACTGTCAGCTTCCATTA------------GGTCAATCTCTCTGTGCAGTACCTGCGACTACTATTCGTGCAGCCACTGGTACCACA------TCATCGCTGCAACTTGCCACTATCAACTTTACAGAGCCTCACATGCTCACTCCTATTAAC------TCTAGTAGGTTCATTGTTGAGATACCTACTAATTTCTCTTTTGGAGTTACGCAGGAATTCATTCAGACAACCATTCAGAAGGTTACTGTCGATTGTAAACAGTATGTCTGTAATGGTTTTGAAAAGTGTGAACAGCTGCTTCGTGAGTACGGCCAATTCTGCGCTAAAATTAATCAAGCTCTACATGGCGCTAACCTTCGCCAAGATGAGTCTGTTTCTAATCTTTTCTCAAATATAAAGACGCAGGCCACCCAGCCA---CTTGATGCTGGCTTAACCGGTGACTTTAATTTGACA---CTCCTTCAAGTTCCTAAAGTTGTCACTAGTCAGTACAGCTATAGGAGTGCTATAGAAGACTTGCTTTTTAACAAGGTCACCATTGCTGACCCTGGTTATATGCAAGGC---TATGACGAGTGCATGAAG---CAAGGCCCACCCTCAGCGCGTGACCTTATCTGCGCTCAGTTTGTGGCTGGTTACAAAGTGTTACCTCCTCTATATGACCCCAATATGGAGTCCATGTACACCACCTCCCTCACTGGGGCTATTCTTGGTGCTGCTTGGACGGCTGGAGCTTCGTCCTTTGCTGCCATTCCTTTTGCACAGAGTGTCTTTTACCGGATGAACGGCATTGGCATTACGCAGCAGGTTCTCTCTGAGAACCAGAAGCAAATTGCCAATAAGTTCAACCAGGCTTTAGGTGCTATGCAAACAGGGTTCACT------------------------------------------ACAACTAACCTAGCCTTTGCAAAGGTGCAGGAAGCCGTGAACGCTAATGCACAAGCTCTTTCTAAGTTGGCATCTGAACTTTCAAACACTTTTGGTGCCATCTCCTCATCTATCAGTGACATCCTTAAGAGGCTTGACGCTGTAGAACAAGAGGCGCAAATTGATAGGCTTATCAATGGTCGTCTCACATCACTTAACGCATTCGTTGCGCAGCAACTCGTGCGTTCTGAAACTGCTGCCAGATCCTCTCAATTGGCCGTTGATAAGGTCAATGAGTGTGTTAAGTCACAGTCCAAGAGAAATGGATTCTGTGGTTCTGGCAATCATATTGTCTCGTTCGTCTCTAATGCGCCGAATGGGCTTTACTTTTTCCATGTGGGTTATGTTCCCACTGCGCATATTAATGCAACTGCCGCTTATGGCCTTTGCAATACTGAGCTGCCGCCTAGGTGCATAGCTCCTATTGACGGCTATTTTGTTACTAATTCCTCCGCTACCCGCGATGCTGACCCTGAGTGGTACTACACGGGTAGTGCTTTTTATAATCCTGAACCGATCACTCTAGCTAACACGCGTTACGTGTCTAAG---GATACTAAGTACCAAGAACTCAATAATAAACTTCCTCCACCACTTCTCAGTAACCAGACTGATGAGAGTTTCAGAGATGAGCTGGAAGAGTTCTTTAAGAATGTTTCTTCTCAAGGTCCTAACTTTCAGGAGATATCAAAGATTAATGCCACTCTGTTGGATCTTTCTGATGAGATGAAA------------------------------------------GTTCTTAACGAGGTGGTCAAGCAACTTAACGAGTCATACATTGACCTTAAGGAGCTTGGTAATTATACCTATTACCAGAAATGGCCTTGGTACGTCTGGTTGGGCTTCATAGCAGGACTTGTGGCTCTAGCCCTGTGTGTCTTTTTCTTGCTCTGTTGTACTGGTTGCGGAACCAACTGTATGGGCAAGTTT---AAGTGTAACCGTTGCTGTGACAGTTATGATGACTATGAA---------------GTTGAGCCGCATAAGATTCATGTCCAT
>16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus ---MFIVFLISYTTFLIPY-------------TATTTCFSGPTTENK-LNIS-------SGSRGVY-YPDDIFR---------S-NVSVLVTGRFLRFNTTLTWYN------S---WN----------QAYSSPVLPFGHG--VYFST--IDKSNVVRGW--------------IFGTTLDNTTQSA---------LLV-------------NNGSAITIEVC-YFQFCDNPAFIISGGAQTN-TAIYINLRN--CTYVDTLRDLPL-SFAEVDGGFKHLREFVFKNSDGFLHIYGAYQ---PHDLDIGAPAALPAQFLPLKPLWKLPLGLNITNYKVV----TTLKP----------TNQAFQAAYIVGNLKHTTMMLSFNENG-----TMSNAID-------CSQDPLAELKCTLKQF---DVGKGIYQTSNFRVQPTVDVARFPNITNVC--PFDKVFNATRFPSVYAWERTKISD-----------------CVADYTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRFS------EVRQVAPGQTGVIADY-----------------------NYKLPDD---FIG-----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFERDLSSEENGVLTLST----YDFNQNVPL---------E-YQATRVV-----------------VLSFELLNAPATVC---------GPKLSTPLVK--NQCVNFNFNGLKGTGVLTD-SSKTFQSFQQFGRDASDFTDSVRDPQTLQILDISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTIHADHLTHSWRVYTTGPHV---FQTQAGCLIGAEHVN--VSYQCDIPI----GAGICASYHTASLLRSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTTEVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQDKNTQEVFAQVKQMYKTP-TIRDFGG-FNFSQIL----PDPLKPTKRSFIEDLLYNKVTLADAGFMKQ-YADCL---GGINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAITQIQESLT--------------TTATALGKLQDVVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHEGK---AYFPREGVFVSNGS-------SWFITQRNFYSPQIITTDNTFVAGSCDVVIGIINNTVYDPLQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVDIQKEID--------------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGLVGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLHYT >Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus -----MLILFVFLPFITAD-----------------TCLNFTNLAAPAYNIA------SSSRRGVY-YPDDIFR---------S-DFLHLVNDYFLPFGSNVTQFY------T---QG----------TNIDNPTLPFRDG--VYFAA--TEKSNIVRGW--------------IFGSTLDSTSQSA---------IIL-------------NNSTNLIVRVC-NFELCKVPLFVVFKSNNSQLSHLFSDSFN--CTFEYVSRAFSL-DIREQSGNFVDLREFVFRNRNGFLHIYEGYE---AISIVRGLPAGFNV----LKPLLKIPFGLNVTSFKTF----LTVYR------VAAGSISVASSAYFVGYLKPLTFMLSYDLNG-----TINNAVD-------CSQDPLAELKCTIKNF---NVSKGIYQTSNFRVSPTREVVRFPNITNRC--PFDSIFNASRFPSVYAWERTKISD-----------------CVADYTVLYNSTSFSTFKCYGVSPSKLIDLCFTSVYADTFLIRFS------EVRQVAPGETGVIADY-----------------------NYRLPDD---FTG-----------CVIAWNTANQ------DVGSYFYRSHRSTKLK-----PFERDLSSDENGVRTLST----YDFNPYVPL---------D-YQATRVV-----------------VLSFELLNAPATVC---------GPKLSTELVK--NQCVNFNFNGLKGTGVLSS-SSKRFQSFQQFGRDASDFTDSVRDPQTLEILDITPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVPTAIRADQLTPAWRVYSTGVNV---FQTQAGCLIGAEHVN--ASYECDIPI----GAGICASYHTASTLRSVGQ------KSIVAYTMSLGAENSIAYANNS-IAIPTNFSISVTTEVMPVSMAKTSVDCTMYICGDSQECSNLLLQYGSFCTQLNRALTGVALEQDKNTQEVFAQVKQMYKTP-AIKDFGG-FNFSQIL----PDPSKPTKRSFIEDLLFNKVTLADAGFMKQ-YGECL---GDISARDLICAQKFNGLTVLPPLLTDEMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLT--------------TTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGRGYHLMSFPQAAPHGVVFLHVTYVPSQEKNFTTAPAICHEGK---AYFPREGVFVSNGT-------SWFITQRNFYSPQIITTDNTFVAGNCDVVIGIINNTVYDPLQPEL--DSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEID--------------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGLIAIVMATILLCCMTSCCSCLKGAC-SCGSCC-KFDE-DDSEPVLKGVKLHYT >Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus -----MLILFVFLPFITAD-----------------TCLNFTNLAAPAYNIA------SSSRRGVY-YPDDIFR---------S-DFLHLVNDYFLPFGSNVTQFY------T---QG----------TNIDNPTLPFRDG--VYFAA--TEKSNIVRGW--------------IFGSTLDSTSQSA---------IIL-------------NNSTNLIVRVC-NFELCKVPLFVVFKSNNSQLSHLFSDSFN--CTFEYVSRAFSL-DIREQSGNFVDLREFVFRNRNGFLHIYEGYE---AISIVRGLPAGFNV----LKPLLKIPFGLNVTSFKTF----LTVYR------VAAGSISVASSAYFVGYLKPLTFMLSYDLNG-----TINNAVD-------CSQDPLAELKCTIKNF---NVSKGIYQTSNFRVSPTREVVRFPNITNRC--PFDSIFNASRFPSVYAWERTKISD-----------------CVADYTVLYNSTSFSTFKCYGVSPSKLIDLCFTSVYADTFLIRFS------EVRQVAPGETGVIADY-----------------------NYRLPDD---FTG-----------CVIAWNTANQ------DVGSYFYRSHRSTKLK-----PFERDLSSDENGVRTLST----YDFNPYVPL---------D-YQATRVV-----------------VLSFELLNAPATVC---------GPKLSTELVK--NQCVNFNFNGLKGTGVLSS-SSKRFQSFQQFGRDASDFTDSVRDPQTLEILDITPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVPTAIRADQLTPAWRVYSTGVNV---FQTQAGCLIGAEHVN--ASYECDIPI----GAGICASYHTASTLRSVGQ------KSIVAYTMSLGAENSIAYANNS-IAIPTNFSISVTTEVMPVSMAKTSVDCTMYICGDSQECSNLLLQYGSFCTQLNRALTGVALEQDKNTQEVFAQVKQMYKTP-AIKDFGG-FNFSQIL----PDPSKPTKRSFIEDLLFNKVTLADAGFMKQ-YGECL---GDISARDLICAQKFNGLTVLPPLLTDEMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLT--------------TTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGRGYHLMSFPQAAPHGVVFLHVTYVPSQEKNFTTAPAICHEGK---AYFPREGVFVSNGT-------SWFITQRNFYSPQIITTDNTFVAGNCDVVIGIINNTVYDPLQPEL--DSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEID--------------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGLIAIVMATILLCCMTSCCSCLKGAC-SCGSCC-KFDE-DDSEPVLKGVKLHYT >Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus MLRNKKFLSLFVFSVVLPCAY-----------SNTGTCSNTINRFMY-LKLGLPESVNDAYVSGYLPVRDNWTCS------AGF-WQYYNAHAIFMSYYSTAMDFAIGVGSSKSYN------------TKWGLYFWQKNNGYRAVFRICKW-DSKIEPSFQPSNQQARECLINKEFYMGFGHAKNQIFGVSWSGNRVTLHTLDKVVSFFVEGADAWDYASYRCANGYSCA--HQVVYTPVTLRITTVPEGIRS-YDLCTNCSGFPEH-VFAVLDGGEIPP-NFDFTN---WFYLTNASS---PVSGRVVGVQPLQ-----LLCLWPIPALLGTATDITFDRNGTSDVRCNGFSSNATADAMRFSLNFTENGVFAKEGVITLKTVSNTFKFSCSNSSTYTSPY-VIPFGHIDQPYYCFTTFYINETTGTTATSFVGMLPPIVREFVITRLGDVYLNGYRIFSVGEVVSVNFNISSTDHRDFWTVAFVKDAEVMLDIEDTYIKQLLYCNNPVNVVKCQQLK-FVLEDGFYSYVPASEDSLPRTIVRLPRFMTHNFINVSVVVSFYFDDGKHDTPVGSDFYECATCAPKYYHVRFTDYWLDG-----SNHTNVCVNTASFTTRLFTDYFGT-SGAVRIEIEPGTC-----PFGFD---TLNNYLAFGS----LCFSTV-P----------NGGCTMNIVTQGPYGQ----PHTFA-VLYVSYTDGDNIIGVPPSNIPAYGVADMSQVYL--DTCTTYTIYGMTGRGIITR-SNNTFITG-LYYTSNAGNLLAYKNSTTGIVYNIYPCQLAGQVAVI--SDN------IVGMASSTPNVSLDFNVTVVADSFYYLSNSAE-----------------------PCDQPVLTYAGIGICADGSITNNTARRAA-----------------SDPISPVISGN-ISVPTNFTFSVQVEYIQLMLKPVTVDCSVYVCNGNPRCLQLLAQYASACRTIEQALQ-LSARLESVEVNSMISISQQALDLGVIDNFNHDFNLTNVL------PASVGGRSAVEDLLFDKVVTSGLGTVDADYKECAS-RTANTVAEVGCVQYYNGIMVLPGVVDQSLLAQYSAALTGAMVLGGITAAAA----VPFSIAVQSRLNYLALQTDVLQRNQQQLANSFNAAMGNITEAFGRVNDAIEQTSHAISTVAQALDKVQNVVNDQGMALSQLTKQLASNFQAISSSIEDLYNRLDRVEADQQVDRLITGRLAALNAFVAQQLTKYTDVRASRQLAQEKINECVKSQSFRYGFCGNGTHVFSVVNAAPDGMMFFHSVLLPTAYMEVAAFSGLCVEGK-GFVLREVGNVLFEKDG-------RYFITARRMFEPRIPQTADFVQISGCDVVYLNVTRDELPTIIPDY--VDVNGTVEDILSKLPNRTSPELDLDIFNATYLNLTSEIADLTARSESLKNTTLELKELIANINATLVDLEWLNRVETYIKWPWWVWLIIVLVLILFTCLMLFCCCSTGCCGIFSCLASSCGACCDIRGTKLQRYEAIE--KVHVQ >Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus MLRNKKFLSLFVFSVVLPCAY-----------SNTGTCSSTINRFMY-LKLGLPESVNDAYVSGYLPVRDNWTCS------AGF-WQYYNAHAIFMSYYSTAMDFAIGVGSSKSYN------------TKWGLYFWQKNNGYRAVFRICKW-DSKIEPSFKPSNQQARECLINKEFYMGFGHALNQIFGVSWSGNRVTLHTLDKVVSFFVEGADTWDYASYRCANGYSCA--HQVVYTPVTLRITTVPQGIRS-YDLCTNCSGFPEH-VFAVLDGGEIPP-NFDFTN---WFYLTNASS---PVSGRVVGVQPLQ-----LLCLWPIPALLGTATDITFDRNGTSDVRCNGFSSNATADAMRFSLNFTENGVFAKEGVITLKTVSNTFKFSCSNSSTYTRPY-VIPFGHIDQPYYCFTTFFTNETTGATATSFVGMLPPIVREFVITRLGDVYLNGYRIFSVGEVVSVNFNISSTDHRDFWTVAFVKNAEVMLDIEDTYIKQLLYCNNPVNVVKCQQLK-FVLEDGFYSYAPQSEDSLPRTIVRLPRFMTHQHINISVVVSFYFDDGQADTPVGSDFYACATCAPKYYKMVFADVDWTGIHGDILNVTGVCVNAASFTTKFRSSYLGADGVYVG--LEAGSC-----PFSFD---TLNNYLTFGS----LCFSTV-P----------NGGCTMNVVSKGPYGE----PHTFA-VLYVSYTDGDNVIGVPPYNIPPYGVSDMSIVYF--DVCTTYTIYGMTGRGIITP-SNNTFITG-LYYTSLAGDLLAYKNSTNGIVYNVYPCQLSGQVAVI--SDN------IVGMASSTPNVSLDFNVTVVADSFYYLSNSAE-----------------------PCDQPVLTYAGIGICADGSITNNTARRAA-----------------SDPISPVISGN-ISVPTNFTFSVQVEYIQLMLKPVTVDCSVYVCNGNPRCLQLLAQYASACRTIEQALQ-LSARLESVEVNSMISISQQALDLGVIDNFNHDFNLTNVL------PANVGGRSAVEDLLFDKVVTSGLGTVDADYKECAS-RTANWVAEVGCVQYYNGIMVLPGVVDQSLLAQYSAALTGAMVLGGITAAAA----VPFSIAVQSRLNYLALQTDVLQRNQQQLANSFNAAMGNITDAFGRVNDAIEQTSHAVSTVAQALNKVQTVVNDQGMALSQLTKQLASNFQAISSSIEDLYNRLDRVEADQQVDRLITGRLAALNAFVAQQLTKYTDVRASRQLAQEKINECVKSQSFRYGFCGNGTHVFSVVNAAPDGMMFFHSVLLPTAYMEVAAFSGLCVEGK-GFVLREVGNVLFEKDG-------SYLITARKMFEPRVPQTADFVQISGCDVVYLNVTRDELPTIIPDY--VDVNGTVEDILSKLPNRTSPEFNLDIFNATYLNLTSEIADLTARSESLKNTTLELKELIANINATLVDLEWLNRVETYIKWPWWVWLIIVLVLILFTCLMLFCCCSTGCCGIFSCLASSCGACCDIRGTKLQRYEAFE--KVHVQ >BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus ----MWAILLILPAVLA------RPSCI-KS-SVSLSSIEHNVTYQS-FVLS---------KVSCL-LPDPFIA----------YSGQTLKQSIYYADTTNVTVYPVTPYKKD--SKA----------TMYNTTQVLVGNG--LFVHTYMYREQDSSTY--------CQEPFGVVFGTTFEQDRIAI---------IMIVPGNLGSWPTVSKPTTIKVYIIVGSNATICAYPAFNRWGPAG---QFYADDAFV--NHGDSCFVNNTF-EIPLNTSRI----NLAFRFNDGNLLLYHSRW---LPTSGLNLLEDTP-----LHFYMSVGVGANLPNAQFF----QSLSR--SLDGSGDGKCFSAQNNLYIAPIVQRELLVAYSDAG-----IPTKVAD-------CSLNAGEELFCVTGTF---DPPTGVYPLSRYRAQLS-GSVHITQQLSHCALPYKDILDPPQ-PVV--WKRYTVAN-----------------CSFDFDVIVNNLPTYELKCYGVAPTRLAQMCYSGVTLDVMRINST------HFTNMLGNVPDVFSMY-----------------------NYVLPTD---FYG-----------CVHAYYINST-NKRYTVAYQRGYSKVITPGGR-----QPYND---YVRTLLNTPNE---IC------T---------R-ANCFGLV-----------------VISLNPASGSHLVC---------PTNNDTDVVE--NQCVKYNFYGYSGNGVLTK-SNLTIPDNKLFVASNTGSIIAVK--AQDTVYSISPCVSVPVSVGY--DPNYEQ-ALLFNGLECNQRAVAVSIPASAY-WLRTVSDNQTAGVFDTPSGCVYNVINRTDITVNACDMPI----GNSLCLINATSTQARATSGDDTKSYLSLVNYDPTY-TSLTKVLTPVYWVSIPTNFTLAAGTEYIQTTSPKINIDCAKYLCGDSDKCLTVLLQYGTFCDDVNKALAEVSSVIDSTMVSLVSELTADVVRS-ENTAFDTTYNFTSLMGCLGSSCNTRNYRSALSDLLYNKVKVADPGFMSS-YQKCIDSQWGGSVRDLICTQNFNGISVLPPIVSPAMQSLYTSLLVGAVASAGYTFGITSVGVIPFATQLQFRLNGLGVTTQVLVQNQQLIANSFNNALTNIQKGFD--------------ATNLALSQMQSVINQHAQQLQTLVNQLGNSFGAISSSINEIFSRLDGLEANAQVDRIINGRTVVLNTYVTQLLLKASEVRSQAALARQKISECVKAQSLRNDFCGNGTHVFSVPQLAPNGVMFIHYTYQPTAYALVQTAAGLCYNGT---GYAPLSGMFVLPND-TN----LWHYTKMNFYNPVNITFENTQVLDSCAVNYSYVNYSVIEPTPPSS--YNFTEEFNKWYKNHSSYFNNTFNPGDFNFTGVNISEQLA--------------TLTDVVNQLNKSFIDLKQMNVYEQTIKWPWYVWLAMIAGLVGLVLAVIMLLCMTNCCSCFKGLC-SCRHC--SYDEIEDVYPAVRVHNKRTE >BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus -MILSLLLLVIAVCVNNNYAWLGLQRNAIPPSNQDGECGGDPGKLPN-LNLGLPPN-KTVFVSGYLPLHKGWVCPTHPLGGGGYGTTFNDIHAIYWSYHSTANAVELAVSSGNGSVTR----------D-WSLYVHHSNNQGYMYFKICRW-GAVYPLNLSPNHNRG-DCLVNRKFNFRFLHGANQVLGVTWSSNYVTLYGLNNTYRFYL--HNNWERATVRCHTKQSCA--FFPVENVTTLNITTNGEGLIESYDVCADCGGFPVH-VFPVLEHGYIPN-DFSFSN---WFMLSNTST---FLQGKLVSTQPLK-----LMCLWPVPSLLANDEKIFFN---ASGATCNGYQFDGVADAIRFSLNFSSDQVFNGVNNIVFDVEGGTFEFFCTNDTSVNPTYRYVPFGQLTEIYRCFVET---TAENGTHTTFVGILPPVVREIVVSRLGAIYINGYRLISLPVIESIVFNVTSKVGSDFWTVAFAQDVEVLLELNATNIVDILYCESPINKLKCQQLT-FSLDDGFYPASSAYTEYTPRSYVALPYHATHTEVVLGVHLSLY-----------------------TKHSATL---NGG-------NDTICVNTTQFTTVLNAS---VYTG-ARGDVVNVNC-----PFTWA---SLNDYLSFGT----ICFSFE-PL---------PGGCTMSIN-VVNLGY----YTPFA-TLYVGYTRGHGITG---VSQKVGGIFDPSFITL--DTCTEYTVYGITGKGVITS-LNKTIVAG-LYYTSTSGQLLGFKNSTTGEVFAVRPCDLASQVAVY--QND------IIGAMTASRNSSFGFANVSELSNFYYHSNGHL-----------------------GCEEPVLIYGKMGICSDGSLTEVNNKDAE-----------------QQPVSPIATAN-VTVPVNFTVSVQVEYLQMYMQPVSVDCNTYVCSGNVHCLRLLTQYASACRNIESSLQ-LSARLESLEVNSAITVSERAASLANITNFEN-YNLSVLL------P-NLNGRSAMEDLLFNKVVTNGLGTVDQDYKQCIKDKGVGDVADVACAQYYNGVMVLPGVVDDTKMSLYTASLVGGMVLAGFTAGAA----IPFSLAVQARLNYVALQTDVLQRNQQILAESFNSALSNITEAFTEVNEAIKNTADAINTVATALGKVQSVVNQQGEALAQLTKQLSSNFQAISSSIEDIYLRLDKLAADAQVDRLISGRLAGLNAFVTQTLTKYTEVRASRQLALQKVNECVKSQSSRYGFCGNGTHLFSVVNAAPNGIMFFHTVLIPSSYTTVQAWAGVCVNGDVGLILRDVRNTLFYLDS-------KYYITTRDMYQPRTPVQSDFVRISNCSVSYVNITSEQLGDIIPDY--LDVNKTLNDLQQSRPNYTVPDLGLDQYNTTILNLTSEIAMLQNKSDSLIESTVKLHKLIEQLNQTYVDLEWLNRLESYVKWPWWVWLAILLALIFTSFILLYCCCSTGCCGCTSCLA----DCRGQRLQ------RYEVEKVHIQ >BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus ----MLFLAVYAAELLVLITQIPAVFSYG---GERFTCSPNYASLPN-LNLGLPPN-STVLVSGYLPRPGDWVC------YTGT-TTHDNIRGVFWSYYSHGSAVAIGISNKDQTTTP----------DQWALFAHHSNNGGQFYLRICKWLNGG-NLDWATESSRG-LCIVNRKFRFQFSHAAGQVIGVTWSSNVVTFYG-SRSYRYYL--TNNWNRVDVKCVNYPTCI--INPVRNITTFNVTTNAQGLFQSYTVCDDCNGFPQH-VFAVLDGGYIPS-EFGLDN---WYVLSNTST---VLDGRVLTNQPLL-----VACLWPVPSLLSNDNPIHFNMSLNTGVNCNGYSEVREVSHLRFALNFTNQQVLNGVHNIDLLGDTFNFTFTCTNNSDITKGERFVPFGFLDNVYRCFVYF---DVGNGTVNKFVGILPPVVKEIVISKFGTVYINGVNMATLPPVNSVIFNVTSTVGSDFWTVGFTDLADVMIDINATRIVDLLYCDTPINKLKCQQLS-FSLDDGFYTTTNVYKQAVPRTYVALPYHATHSAINITAEVSVN-----------------------SNDDRFL---INGL------NGTFCVNTTQFTV--ITHFTQYTG--MRVAIENLDC-----PFTLD---SLNNFLSFGS----ICFSTY-AV---------GGGCRMRLD-KVLIST----PTPWR-ILNIVYTDGDRTTG---VTKASGGIFDPSELYV--GVCTDYTIYGISGRGIINQ-LNTTIIAG-LYYTSPAGQLLGFKNATTGDIYGVRPCALSSQAAVY--QNE------IIGVMTASANESFGFQNVTETPKFFYHSNGNS-----------------------TCTEPVLTYGSVGVCPDGTLIMVQTRSGN-----------------VNPVSPIVSGN-ITIPLNFTVSVQVEYLQMYLQPVSVDCNMYVCGGNPHCLRLMSQYASACRTIEESLQ-LGARLESTEVANTISVSSQAVQLANITNFDS-YNVSVLL------P-RANGRSFIEDLLFDKVVTSGLGTVDQDYKQCVNEWGIGEVADLSCAQYYNGIMVLPGVVDANMMTLYTASLTGAMVFGGITASAS----IPFSLAVQSRLNYVALQTDVLNRNQEILAQSFNSALGNITAAFSEVNHAFQETSDAINTVAQALGKVQTVVNEQGQALSQLTRQLASNFQAISNSIEDIYNRLDGLTADAQVDRLITGRIGALNAFVAQTLTKYTEVRASRQLAIQKINECVKSQSARFGFCGNGTHLFSIANAAPNGIMLFHTVLLPSEYTTVQAWAGICIDNNVGLILRDFKTTLFFSD--------KYYVTPRDMFEPRTPVQADFVRIANCSVNYLNISSSELGTIIPDY--IDVNKTLEELEQQRPNYTLPELDIDRFNNTYLNLSAEIAELQRKSESLQNSTIQLQELIERINSSYVDLELLKRIETYVKWPWYVWLAIILVMSLFSFLMLYCCCMTGCCGCCSCLTSCCFDCRGKRLQ------QYEVEKVHIQ >BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus ----MLSLAVYFAELLVIISYLPDLVT-----GDLNGCADGHNRLPN-LNLGLPPN-STVFVSGYLPRKNGWECPTINNQYGGS-TNYENVHGIFWSYHSTAQRFELGVSNKDQLVNT----------NRWALYVYQNNNEGVLKLRICKWLRGQYSLQWLHGARHG-QCAVDRAFNFRFVHAENQVLGVTWSSNYVTFYGINGSYRYYI--PNDWFRVSVKCENKYVCA--IYPVYNQTTLNITTNAKGLIKEYSVCESCNGFPAH-VFPVLEGGKIPA-DFDFTN---WFYLSNTST---LVAGRVVGIQPLR-----LLCLWPVPSTTANDDKIYFN---TTGANCNGFVGEGVADALRFSLNFTSNQVLNGVHNIILESTSSKFTFTCRNDSESTFYR--VPFGETGQVYYCFIFT---EAGNQSYNTFVGILPPVLKEIVISRYGSIYLNGVKLFSLPTLESVIFNVSSNVGSDFWTIAYAQDAQVMVDLNATSITDLLYCDTPLNRLKCQQLS-YALEDGFYPTTNIYTKDIPRSYVALPYHATHAVLNITAYIGD------------------------KKDDRIQ---INGF------NDSFCVNTTQFTTN----FVQTDSGIIKAELKNGDC-----PFTFD---SINNYLTFDS----ICFSIE-PI---------GGGCTMNIV-RTWFGQ----SVPWR-TLYVSYTKGSRITG---VKTPNTGVFDPSTFVE--DVCTDYTIYGMSGRGVISR-SNASYIAG-LYYTAISGQLLGFKNATTGETFVVVPCDLSSQAAVI--GDK------VVGVMTSITNSSFEFVKSIETPNFYYLTNATA-----------------------NCTSPVITYGKLGVCEDGSIAEVKVNTHV-----------------QTPVSPISTGN-ITVPSNFTVSVQVEYLQMYMRPVSVDCAMYVCNGNPHCLRLLTQYASACRTIEDALQ-LSARLESIEVNSVISVSEDALELANISNFDH-YNMSALL------P-KKNGRSFIEDLLFNKVVTNGLGTVDQDYKKCMKDKGFGEASDIACVQYYNGIMVLPGVVDDSKMALYTAALTGGMLLAAFTAGAS----IPFSLAVQSRLNYVALQTDVLQKNQQILATSFNNAMSNITVAFTEVNQAIKETSDAINTVAKALGKVQSVVNEQGQALSQLTRQLASNFQAISSSIEDIYNRLDSLAADAQVDRLITGRLGALNAFVTQTLTRYTDARASRQLAIQKINECVKSQSMRYGFCGNGTHLFSIANAAPNGVMLFHTVLIPTEFVTVEAWSGVCVDGTHGLILRDVRTTLFQQGS-------TYYVTTRDMFEPRTPVAADFVRIANCSVTYVNITADSLGEIIPDY--IDVNKTLEEL--GRPNFTLPDFNLDQFNNTYLNLSAEIALLNAKSESLYNTTQRLEKSIENINNSYIDLELLNRLESYVKWPWYVWLAIFLALILFSFLMLYCCMATGCCGCCSCLSNSCFDCGGRRLQ------RYEVEKVHIQ >BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus ----MLSLAIYIAEILAFLQ-LPDLTTGAP--NKDGDCGDGYNRLPN-LNLGLPPN-STVFVSGYLPQKTGWVCP--ENKEAGA-TSYEGVHGVFWSYYATGQDVEIGVSNFRQLNNT----------NRWALYVHQKNNDHVLHFRICKWLAGTYTPQSRPWSRYG-QCAVDKRISFTFEHQGNQVLGVTWSSNYVTFYGISKSYRYFL--KNDWYRVTVKCLNKYACA--LYPVYNQTTLNITTNARGLIQSYSVCDSCNGFPAH-VFPVLEGGKIPA-DFDFTN---WFYLTNSST---LVAGRVVGIQPLK-----LLCLWPVPSITANDDKIYFN---TTGANCNGFVGEGVADALRFSLNFTANQILNGVHNIILEGTEAKFTFTCRNDSESTLFR--VPFGVTGQVYYCFVFT---ESRNQSYNTFVGILPPILKEIVISRYGSIYLNGVKLFSLPVLQSVIFNVSSKVGSDFWTVAYAQDAQVMVDLNATSITDLLYCDTPLNRLKCQQLS-YALEDGFYPTTNIYTRDIPRSYVALPYHATHMVLNITAYIGD------------------------KKDDRIQ---INGF------NDSFCVNTTQFTTN----FVQTDSGIIKAELKNGDC-----PFTFD---SINNYLTFDS----ICFSIE-PI---------GGGCTMNIV-RTWFGQ----SVPWR-TLYVSYTKGSRITG---VKTPNTGVFDPSTFVE--DVCTDYTIYGMSGRGVISR-SNASYIAG-LYYTAISGQLLGFKNATTGETFVVVPCDLSSQAAVI--GDK------VVGVMTSITNSSFEFVKSIETPNFYYLTNATA-----------------------NCTSPVITYGKLGVCEDGSIAEVKVNTHV-----------------QTPVSPISTGN-ITVPSNFTVSVQVEYLQMYMRPVSVDCAMYVCNGNPHCLRLLTQYASACRTIEDALQ-LSARLESIEVNSVISVSEDALELANISNFDH-YNMSALL------P-KKNGRSFIEDLLFNKVVTNGLGTVDQDYKKCMKDKGFGEASDIACVQYYNGIMVLPGVVDDSKMALYTAALTGGMLLAAFTAGAS----IPFSLAVQSRLNYVALQTDVLQKNQQILATSFNNAMSNITVAFTEVNQAIKETSDAINTVAKALGKVQSVVNEQGQALSQLTRQLASNFQAISSSIEDIYNRLDSLAADAQVDRLITGRLGALNAFVTQTLTRYTDARASRQLAIQKINECVKSQSMRYGFCGNGTHLFSIANAAPNGVMLFHTVLIPTEFVTVEAWSGVCVDGTHGLILRDVRTTLFQQGS-------TYYVTTRDMFEPRTPVAADFVRIANCSVTYVNITADSLGEIIPDY--IDVNKTLEEL--GRPNFTLPDFNLDQFNNTYLNLSAEIALLNAKSESLYNTTQRLEKLIENINNSYIDLELLNRLESYVKWPWYVWLAIFLALILFSFLMLYCCMATGCCGCCSCLSNSCFDCGGRRLQ------RYEVEKVHIQ >CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus ----MLLTVVLSLALIACDASATRPECFANS-NFQLYPRNHTVNITS-LSVN---------VANLL-LPDPYIA----------YSGQTLRQNLFMADLSRTIIYPITPPAKDS-TGG----------YIYNTTILPVASG--LFVHTWMYRQESTSRTY-------CQEPFGVAFGDTFIQDRIAI---------VIIAPDNLGSWNQVSYRNVTTVHLVVCSNATLCINPGFNRWGPAG---NIIASNALV--DHSNSCFVNNSF-NVSISTSRI----NLAFLFKDGDLLIYHSNW---LPKGSFDFNQSFP-----LQYFMTLPVGGNLPRAQFF----QSIVRQGGTNNGADDRCVDFNISLHIAHLVNRDLLVSYFNNG-----SVANAAD-------CAESASEELYCVTGSF---QPPTGVYPLSRYRAQVD-GFVRVTQRGDYCQPPYADLLEPPQ-PVV--WRRFMLYN-----------------CAFDFSVVIDNLPTHQLQCYGISPKRLASMCYSSVTIDVMRINAT------HLNNLLNRVPDSFSLY-----------------------NYAVPDN---FYG-----------CLHAFYLNST-T-----AYAVANRFPIKPGGR-----QSNRD---YIATVLNAAH----YT------T---------F-SYIFGLA-----------------VITLKPASGNKLVC---------PIANDTDIIT--ERCVQYSLYGYTGTGVLSKNTSLTVPNGKVFTASSTGAIIGVF--INGTMYSITPCVTVPVSVGY--HANFER-VLLFNGLSCSQRSRAVSRPASTL-WNFSVSDESA---IDTLSGCVVNAILHNDTTVSTCSMPL----GNSLCLINDTTVAIAHAVG---LPKLYLVNYDPLYDNNSATPITPVYWVKIPTNFTLTATDEFIQTNAPKVTIDCARYLCGDSSRCLNILLHYGTFCDDINKALAKVNTILDSALLSLSKELSINTRDEIQSFAFGGDYNFTGLMGCLGPNCGATTYRSALSDLLYDKVKITDPGFMQS-YQKCIDSQWGGSVRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAVASSGYTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNALVNIQKGFT--------------ETSIALSKMQDVINQHAAQLQTLVTQLGNSFGAISSSINEIFSRLEGLAANAEVDRLINGRMMVLNTYVTQLLLQASEAKAQNALAVQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGVLFIHYAYTPTDYALVQTSAGLCYNGT---GYAPLRGMFVLPNN-TN----MWHFTSMQFYNPVNISYSNTQILTSCSINYTSVNYSVLQPSAPSD--YDFQKEFDKFYKNLSTSFNNTFNPNDFNFSMVDVTAQIS--------------SLHQVVDQLNQSFIDLKKLNVYEKTIKWPWYIWLAMIAGIVGLVLAVIMLMCMTNCCSCFKGMC-DCRRCCGSYDSYDDVYPAVRVNKKRTV >CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus ----MVVLLFVMFSLVVAD----RPNCYLP--QYSYTISPATITNTSYFNVN---------PISIV-VPEFSVA----------RTNLVVRQRLQVAAYD-FTKIPITPPHRS----------------IFNNTYFRVGDG--ILVNTHMYHRTNIATNLG-SSFYGCQEPFGAAFGNTFVNEPITL---------VMFYAGNVGSWSSLVTQQQANITIVSCDNATLCANPFFLRWGPGVIR-SFTISNAFQ--CHGNYTFYDTKLVNFTVSTARY----NLAFTFADGDIFMY--YA---ALGDSLNLPTAYP-----LQPYLRIPAGFKPDVVQFF----QAITRP--NGESAEVACASSTVSWYVSRLYYKELLVGYDSYS-----SIVNVSF-------CSSDAESELQCLLGTF---APANGVYSLSNFRSSPT-DNVRITNSASSCSVPYSVLSRPPL-PFV--WKRYAISN-----------------CKFDFQALLSHLPTFQLRCFGISPTKLATMCFGTVTLDIMLVNVT------HYNNLLNDVPDDFSLY-----------------------NYQLPRN---FYG-----------CLHSYYLPND-T-----AFSYTVASRIRYPSW-----VHSITPGGRQPVGPFLDS----LQSSSK-PC---------T-GSCLGLA-----------------VISLSIASANKLVC---------PVGNDTDIVP--DTCVNYNIYGYQGTGVISR-SNYTLPSSKVFSLSSSGELTVFA--VGSSFYQLSPCAFAPISAAF--YKGYTT-SLLFNNLPCSNRHRAVVEPVSAY-WRRSVADNNT---FDTTAGCIFNAYNLTSIVVNQCDLPI----GDSYCLQPSLIKGFEATLS--------LVTYNPL--ADSLTPITPVYQVSVPTNFTLVASTEYIQTYASKISIDCAKYLCGDSSQCRTVLLQYGTFCNDVNVALTRVFTLLDNSLVDTFSSLKSTAPVQ---LAYTGDFNFTSLVGCIGTDCDSKSHRSALSDLLFSKVSVADPGFMQS-YQQCLDAQWGGNIRDLLCTQTFNGISVLPPIVSPSMQALYTTALVGGIAASGFTFGVSSAAVIPFATQLQFRLNGLGVTTNVLMENQQLIANAFNKALVSIQEGFT--------------ATNQALNKIQTVVNNNALQLQVLVQQLGNTFGAISASVNEIFSRLDLLEANAEVDRLISGRMVVLNTYVTQLLIQASELRSQAELAKQKMSECVKSQSLRNDFCGNGTHVLSIPQLAPNGMLFIHYSYQPTKYAQVYTTAGLCFNGT---GFVPRDGLFVRENNESQ----VWYFTKASFYNPVNLSYENTHLLDTCGVNYTTVNNSVLNPIEPPN--YNFQEEFDKYFKNQSSQFNITFDSSQFNVSIVNLNEQMA--------------ALDSVVKSLNESFIDLKKLGVYTQQPNTPWYAWLGMIAGLVGLALAVFMLCCMTNCCSGFRGIC-SCKQC--QYDDYADVYPAVRVSGKRTV >CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus ----MVVLLFAILSIALAD----RPLCTINTGNYVLNPIQANITYTVVNSIN---------PVSLV-VPEFSIA----------RTNLVVRQRLYVA-ATNFTRIPITPPGRA---------------VIFNNTYFDAEDG--FFVNTHMYHTNNIATSPNKPNFYGCQEPFGVAFGNTFENEPITL---------VMVYAGNIGSWTNTVTQTSANITIVSCDNATLCSNPLYLRWGPGGLP-GYVIKDAFH--CHGDYTFYDSKIINFSVDSSRY----NFAFSFADGDIFMY--YA---PLGDSQNVAKAFP-----LQPYLRIPAGFKPKRAQFF----QAIIRK--TAEDAEFQCSRYTTSWYVSYLKYHELLVGYDANS-----IISNVST-------CSFDAESELQCLLGTF---TPANGVYSLSNFRSSPV-DTVRITNSAKACSVPYNLLETPPL-PFV--WKRHSISN-----------------CKFDFQALLSHLPSFQLRCYGISPTKLSSMCFGTVSLDVMLVNVT------HYNNLLNDVPDDFSLY-----------------------NYQLPRN---FYG-----------CLHSYYLPNS-T-----TFNYIVASRSQSPSW-----VYNISPGGRQPPSSFLNT----LPGSAK-PC---------Q-GSCLGLA-----------------VISLSVASANKLVC---------PVGNDTDIVT--GNCVNYNIYGYQGTGVITT-SNYTLPSTKVFSLSASGELTVFS--VGSSFYQLSPCAFAPISAAF--YKGYTT-SLLFNNLPCSGRSRAVVEPVSDY-WRASVVNNST---FDTSAGCIFNAINSTSIVVNQCDLPI----GDSYCLQPSTISRQGSTLL--------LVTYDPL--SDTLTPITPVYEISVPTNFTLVASTEYIQTYASKISIDCAKYLCGDSSQCRTVLLQYGTFCNDVNVALTRVFTLLDNSLVDTFSSLKSTAPAQ---LAYTGDFNFTSLVGCVGTDCDSKSYRSALSDLLFNKVSVADPGFMQS-YQKCLDSQWGGNIRDLLCTQTFNGISVLPPIVSPSMQALYTTALVGGIAASGFTFGVSSAAVIPFATQLQFRLNGLGVTTNVLMENQQLIANAFNKALVSIQEGFT--------------ATNQALNKIQTVVNNNALQLQVLVQQLGNTFGAISASVNEIFSRLDLLEANAEVDRLISGRMVVLNTYVTQLLIQASELRSQAELAKQKMSECVKAQSTRNDFCGNGTHVFTIPQLAPNGMLFIHYSYQPTNYVQVYTTAGLCFNGT---GFVPRDGLFVRENNASQ----LWYFTKASFYNPVNLSYENTRLLDTCGVNYTTVNNTVLNPIEPPN--YDFQEEFDKYFKNQSSHFNITFDSSQFNVSIVNLNEQMA--------------ALDSVVKSLNESFIDLKKLGVYTQTIKWPWYAWLGMIAGLVGLALAVFMLCCMTNCCSGFRGIC-SCRQC--QYDDYADVYPAVRVSGKRTV >JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus ----MTRLMCLLMSLLIFVRGCEAQFVDMSPASNNSECLDSQVDAAAFSKLMWPYPIDPSKVDGII-YPVGRTY----------SNITLSYTGLFPLQGDLGTQYLYSVSHAVGHDGDPTTAYI----SNYSLLVNAFDNGFVVRIGAAANSTGTIVISPSVQTKIKKAYP-AFILGSSLTNTSAGL--PLYANYSLTIIPDGCGTVLHAFYCILQPRTQNRCPGNGGYK--AYFVYETIHNDCVPAINK--N------ASLNSFKT-FFDLVNCTFFDSWDITADEVKEWFGITQDTQGVHLYSSRKGDLYGGN-----MFRFATLPV---YDAIKYY----TVIPR----SFRAKANRRESWAAFYVYKLHQLTYLLDFSVDG-----YIRRTID-------CGHDDLSQLHCSYTSF---EVDTGVYSVSSYEASAT-GTFIEQPNATEC--DFSPMLKGVA-PQVYNFKRLVFSN-----------------CNYNLTKLLSLFAVDEFSCNGISPDAIARGCYSTLTVDYFAYPLS------MKSYIRPGSAGNIPLY-----------------------NYKQSFA---NPT-----------CRVMASVPANVTITKPEAYGYISKCSRLTGDYQHIETPLYINPG-EYSICRDFAP----WGFSEDGQVFKRTLTQFEGGGLLVGVGTRVPMTA----NLEMGFVISVQYGTDTNSVC------PMLDLGESSTITNRLGKCVDYSLYGVTGRGVFQN-CSAVGVKQQRFVYDSFDNLVGYY-SDDGNYYCVRPCVSVPVSVIY--DKDTNLHATLFGSVACEHVTTMMSQFSRLTQSNLRRRDSNA--PLQTAVGCVVGLSNNSL-VVSDCRLPL----GQSLCAVPPVTSFRRRSAS---EFQLAVLNYTSPIVVTPIN--SSGFTAAIPTNFSFSVTQEYVETSIQKVTVDCKQYVCNGFSRCEKLLVEYGQFCSKINQALHGANLRQDESVYSLYSNIKTTSTQT-LEYGLNGDFNLT-LLQVPQIGGSSSGYRSAIEDLLFDKVTIADPGYMQG-YDDCMK-QGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFT--------------TSNQAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLTSLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVANAPNGFYFFHVGYVPTNFTNVTAAYGLCNNNNPLLCIAPIDGYFITNQTTTYSIDTEWYYTGSSFFKPEPITQVNSRYVSS-DVKFEKLENNLPPPLLENSTDVDFKDELEEFFKNVTSHGPNFAEISKINTTLLDLSDEMA--------------ILQEVVKQLNDSYIDLKELGNYTYYNKWPWYIWLGFIAGLVALLLCVFFLLCCTGCGTSCLGKM-KCRNCCDSYED-------FDVEKIHVH >JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus ---MFIVFLISYTTFLIPY-------------TATTTCFSGPTIENK-LNIS-------SGSRGVY-YPDDIFR---------S-NVSVLVTGRFLRFNTTLTWYN------S---WN----------QAYSSPVLPFGHG--VYFST--IDKSNVVRGW--------------IFGTTLDNTTQSA---------LLV-------------NNGSAITIEVC-YFQFCDNPAFIISGGAQTN-TAIYINLRN--CTYVDTLRDLPL-SFEDVDGGFKHLREFVFKNSDGFLHIYGAYQ---PYDLAIGATAALPAQFLPLKPLWKLPLGLNITNYKVV----TTLKP----------TNQAFQAAYIVGNLKHTTMMLSFNENG-----TMSNAID-------CSQDPLAELKCTLKQF---DVGKGIYQTSNFRVQPTVDVARFPNITNVC--PFDKVFNATRFPSVYAWERTKISD-----------------CVADYTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRFS------EVRQVAPGQTGVIADY-----------------------NYKLPDD---FIG-----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFERDLSSEENGVLTLST----YDFNQNVPL---------E-YQATRVV-----------------VLSFELLNAPATVC---------GPKLSTPLVK--NQCVNFNFNGLKGTGVLTD-SSKTFQSFQQFGRDASDFTDSVRDPQTLQILDISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTIHADHLTHSWRVYTTGPYV---FQTQAGCLIGAEHVN--ASYQCDIPI----GAGICASYHTASLLRSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTTEVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQDKNTQEVFAQVKQMYKTP-TIRDFGG-FNFSQIL----PDPLKPTKRSFIEDLLYNKVTLADAGFMKQ-YADCL---GGINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAITQIQESLT--------------TTATALGKLQDVVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHEGK---AYFPREGVFVSNGS-------SWFITQRNFYSPQIITTDNTFVAGSCDVVIGIINNTVYDPLQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVDIQKEID--------------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGLVGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLHYT >Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus ----MKILIFAFLVTLV---------------KAQEGCGVINLKTQPTLTQV------SSSRRGVY-YNDDIFR---------S-DVLHLTQDYFLPFHSNLTQYFSLNIESD---KI----------VYFDNPILKFGDG--VYFAA--TEKSNVIRGW--------------VFGSTFDNTTQSA---------IIV-------------NNSTHIIIRVC-YFNLCKDPMYTVSAGTQVS-SWVYQSAFN--CTYDRVKKSFQL-DTSPKTGNFTDLREFVFKNRDGFFTVYQTYT---PVNLLRGLPSGLSV----LKPILKLPFGINITSFRVV----MAMFS------KTTSNYVPESAAYYVGNLKQSTFMLSFNQNG-----TIVDAVD-------CSQDPLAELKCTTKSF---NVSKGIYQTSNFRVSPVTEVVRFPNITNLC--PFDKVFNATRFPSVYAWERTKISD-----------------CVADYTVFYNSTSFSTFNCYGVSPSKLIDLCFTSVYADTFLIRFS------EVRQVAPGQTGVIADY-----------------------NYKLPDD---FTG-----------CVIAWNTAKQ------DVGSYFYRSHRSSKLK-----PFERDLSSEENGVRTLST----YDFNQYVPL---------E-YQATRVV-----------------VLSFELLNAPATVC---------GPKLSTSLVK--NQCVNFNFNGFKGTGVLTD-SSKTFQSFQQFGRDASDFTDSVRDPQTLRILDISPCSFGGVSVITPGTNTSSAVAVLYQDVNCTDVPTTLHADQLAPSWRVYTTGPYV---FQTQAGCLIGAEHVN--ASYQCDIPI----GAGICASYHTASLLWSTGQ------KSIVAYTMSLGAENSVAYANNS-IAIPTNFSISVTTEVMPVSMAKTSVDCTMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQDKNTQEVFAQVKQMYKTP-TIRDFGG-FNFSQIL----PDPLKPTKRSFIEDLLYNKVTLADAGFMKQ-YADCL---GGINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALISGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAITQIQESLT--------------TTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRTSANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPSQERNFTTAPAICHEGK---AYFPREGVFVSNGS-------SWFITQRNFYSPQIITTDNTFVAGSCDVVIGIINNTVYDPLQPEL--DSFKQELDKYFKNHTSPDVDLGDISGINASVVDIQKEID--------------RLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGLVGLFMAIILLCYFTSCCSCCKGMC-SCGSCC-RFDE-DDSEPVLKGVKLHYT >PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus -MTYSVSLLMCLLTFIGAN----AKIVSIPGGVGTGACPQVDMQPSYFIKHNWPEPIDMNKADGVI-YPNGRTY----------SNITLQTTNLFPRNGDLGTQYVYSASNEKSRTSNVAFI------SNYSYYGNPFGDGIVIRIGQNSNKTGSVIVGTAQTTIKKIYPA--LMLGSSFGNFSVNNKSGAYFNHTLLILPSKCGTVFQVAYCLLQPRTDSYCPGNANYV--SYALIDSPT-DCTSADESKRR------NGLEDIKK-YFNLVNCTYFEEFNVTADERAEWFGITQDSQGVHLYTSRKNGFNSNN-----LFLFASVPI---YDKINYY----TVIPR----SIITPANQRSAWAAFYVYPLHQLSYLLNFDVNG-----YITQAAD-------CGYNDYTQLVCSYGDF---NMKSGVYSTSYYSAKPV-GAYYEAHVYPDC--NFTDLFRENA-PTIMQYKRQVFTR-----------------CNYNLTLLLSLVQVDEFVCDKITPEALATGCYSSLTVDWFAFPYA------WKSYLAIGSADRIVRF-----------------------NYNQDYS---NPS-----------CRIHSKVNSSVGISYSGLYSYITNCNYGGFNKDDVVKPGGRASQPCVTGALNSPTNGQVWSFNFGGVP-----------YRTSRLTYTDHLKN----PLDMVYVITVKYEPGAETVC-----PKQVRPDYSTNITGLLGSCISYDIYGITGTGVFQL-CNATGIPQQKFVYDKFDNIIGFH-SDDGNYYCVAPCVSVPVSVIY--DDNTNQYATLFGSVACQHISTMAAQFSRETRASLVSRNMQN--LLQTSVGCVMGFHETND-TVEDCNLSL----GQSLCAIPPNTNLRVGRST----FGLGSLAYNSPLRVDALN--SSEFKVSLPLNFTFGVTQEYIETSIQKITVDCKQYVCNGFAKCEKLLEQYGQFCSKINQALHGANLRQDDFVRNLFESVKTPQTVP-LTTGFGGEFNLT-LLEPLSVSTGSSNARSALEELLFDKVTIADPGYMQG-YDDCMQ-QGPASARDLICAQYVAGYKVLPPLMDVNMEAAYTSSLLGSIAGAGWTAGLSSFAAIPFAQSIFYRLNGVGITQQVLSENQKIIANKFNQALGAMQTGFT--------------TTNEAFQKVQDAVNTNAQALAKLASELSNTFGAISSSIGDIIQRLDVLEQEVQIDRLINGRLTTLNAFVAQQLVRSESAARSAQLAKDKVNECVKSQSTRSGFCGQGTHIVSFVINAPNGLYFMHVGYHPSQHIEVVAAYGLCDAANPTNCIAPVNGYFIKNQT-TRGVD-DWSYTGSSFYAPEPITTLNTRYVAP-QVTFQNISTNLPPPLLGNSTGTDFKDELDEFFKNVSTSIPNFGALTQINTTLLDLSDEML--------------ALQQVVKALNESYIDLKELGNYTYYNKWPWYIWLGFIAGLLALALCVFFILCCTGCGTSCLGKL-KCNRCCDKYEEYD-----LEPHKIHIH >Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus ----MTHLMFLLMFLLTPI----RGDVDLGPDSTRDTCDEVVVQVSA-FQKDWPQPINPLFADGII-YPTGRSY----------SNISLSYQGLFPRQGDLGRQYIYSVTHAGDSTLYPPQGIGKHFISNYSAETLPFGNGFVVRIGFSANKTGSLVISPTTSKVIKKIYP-AFMLGTAVTSFAHGH-AGRYLNHTLVILPESCGTSLTVFYCILEPRNGTRCPNHQDYT--SYVIWETPHLDCGSSVNR--N------ATLNSFKV-SFNLRQCKFMRTYNISDDENQEWFGITQNAQGVHLYSSRKGDLYGGN-----MFLFDTLPV---YETLKYY----TVIPR----SLRSRLNERQAWAAFYVYSLHKLTYLLDFSVDG-----YVRRAID-------CGYDDVAQLFCSYESF---DVDSGVYSVSSFEAQPR-GYFVEQPHSSEC--DFSAMFSSQP-PQVYNFSRLVFTN-----------------CNYNLTRLLSLFQVSEFSCHQVSPSALASGCYSSLTVDYFAYPLS------MASYLRQGSTGPIAQF-----------------------NYKQDFT---NPT-----------CRILAAVPSNVTIPLPQSYMWLTQCYTNSPSN-----SHYVEAG-SYTPCLGLAS----RGFNTFNSM---------HYDPATGLTATGSYQYISEEALEMAFIISVQYGTDSNSVC------PLQAVHNDTKVDDKLGRCIEYSLYGVTGRGVFQN-CTPVGLKQQRFVYDGFDNLVGYH-SDNGNYYCVRPCVSVPVSVIY--DKATNNHATLFGSVACEHVDTMMSQFSRMTQSRLRVRNIDDAGPMQTSVGCVVGLVNTSL-IVDNCQLPL----GQSLCAVPATTIRAATGTT--SSLQLATINFTEPHMLTPIN--SSRFIVEIPTNFSFGVTQEFIQTTIQKVTVDCKQYVCNGFEKCEQLLREYGQFCAKINQALHGANLRQDESVSNLFSNIKTQATQP-LDAGLTGDFNLT-LLQVPKVVTSQYSYRSAIEDLLFNKVTIADPGYMQG-YDECMK-QGPPSARDLICAQFVAGYKVLPPLYDPNMESMYTTSLTGAILGAAWTAGASSFAAIPFAQSVFYRMNGIGITQQVLSENQKQIANKFNQALGAMQTGFT--------------TTNLAFAKVQEAVNANAQALSKLASELSNTFGAISSSISDILKRLDAVEQEAQIDRLINGRLTSLNAFVAQQLVRSETAARSSQLAVDKVNECVKSQSKRNGFCGSGNHIVSFVSNAPNGLYFFHVGYVPTAHINATAAYGLCNTELPPRCIAPIDGYFVTNSSATRDADPEWYYTGSAFYNPEPITLANTRYVSK-DTKYQELNNKLPPPLLSNQTDESFRDELEEFFKNVSSQGPNFQEISKINATLLDLSDEMK--------------VLNEVVKQLNESYIDLKELGNYTYYQKWPWYVWLGFIAGLVALALCVFFLLCCTGCGTNCMGKF-KCNRCCDSYDDYE-----VEPHKIHVH
Reading sequence file /data//pss_subsets/JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus.result/original_alignment/codeml/fasta/JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus.result.1
Found 18 sequences of length 4656
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 52.0%
Found 3640 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0% 5.4% 10.7% 15.8% 20.8% 25.6% 30.3% 34.8% 39.1% 43.3% 47.4% 51.3% 55.1% 58.7% 62.1% 65.4% 68.6% 71.6% 74.5% 77.2% 79.7% 82.1% 84.4% 86.5% 88.4% 90.2% 91.8% 93.3% 94.7% 95.9% 96.9% 97.8% 98.5% 99.1% 99.6% 99.9%100.0%100.0%
Using a window size of 80 with k as 63
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 1948 polymorphic sites
**p-Value(s)**
----------
NSS: 0.00e+00 (1000 permutations)
Max Chi^2: 0.00e+00 (1000 permutations)
PHI (Permutation): 0.00e+00 (1000 permutations)
PHI (Normal): 0.00e+00
#NEXUS
[ID: 2048837745]
begin taxa;
dimensions ntax=18;
taxlabels
16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus
BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus
CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus
CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus
CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus
JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus
JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus
Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus
PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus
Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus
Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus
Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus
Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus
Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus
BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus
BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus
BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus
BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus
;
end;
begin trees;
translate
1 16BO133_S_ASO66810_1_2016_04_17_South_Korea_Unknown_Bat_coronavirus,
2 BtCoV_Rh_YN2012_Rs4259_S_QBP43279_1_2013_04_17_China_Unknown_Bat_coronavirus,
3 CMR66_NA_AWV67056_1_2013_12_Cameroon_Bat_Bat_coronavirus,
4 CMR704_P12_NA_AWV67040_1_2013_12_Cameroon_Bat_Bat_coronavirus,
5 CMR900_NA_AWV67048_1_2013_12_Cameroon_Bat_Bat_coronavirus,
6 JPDB144_S_ANA96039_1_2012_12_China_Bat_Bat_coronavirus,
7 JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus,
8 Jiyuan_84_NA_ARI44809_1_2012_China_Bat_Bat_coronavirus,
9 PREDICT_PDF_2180_S_ARJ34226_1_2013_02_20_Uganda_Bat_Bat_coronavirus,
10 Vs_CoV_1_S_BBJ36008_1_NA_Japan_Bat_Bat_coronavirus,
11 Anlong_103_NA_ARI44799_1_2013_China_Bat_Bat_coronavirus,
12 Anlong_112_NA_ARI44804_1_2013_China_Bat_Bat_coronavirus,
13 Anlong_43_NA_ARI44789_1_2013_China_Bat_Bat_coronavirus,
14 Anlong_57_NA_ARI44794_1_2013_China_Bat_Bat_coronavirus,
15 BtCoV92_S_QEH60463_1_2015_Singapore_Bat_Bat_coronavirus,
16 BtCoV_Rh_YN2012_Ra13591_S_QBP43290_1_2013_06_01_China_Unknown_Bat_coronavirus,
17 BtCoV_Rh_YN2012_Rs3376_S_QBP43256_1_2012_05_19_China_Unknown_Bat_coronavirus,
18 BtCoV_Rh_YN2012_Rs4125_S_QBP43268_1_2012_09_16_China_Unknown_Bat_coronavirus
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:7.746218e-03,7:3.277895e-03,((((((((2:5.111434e-02,18:4.528017e-02)1.000:3.533327e-01,16:4.990003e-01)0.997:1.227348e-01,17:4.280274e-01)0.952:1.878021e-01,(13:6.655176e-02,14:9.259151e-02)1.000:7.175384e-01)1.000:2.308717e+00,((6:3.253423e-01,10:3.923029e-01)1.000:1.729282e-01,9:4.728408e-01)1.000:9.133833e-01)1.000:5.174199e-01,((3:5.053945e-01,15:4.376285e-01)1.000:3.203318e-01,(4:1.882968e-01,5:9.736026e-02)1.000:4.540675e-01)1.000:8.370512e-01)1.000:1.180391e+00,(11:3.162368e-04,12:3.438999e-04)1.000:2.197993e-01)0.867:6.978859e-02,8:5.805691e-02)1.000:9.676271e-02);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:7.746218e-03,7:3.277895e-03,((((((((2:5.111434e-02,18:4.528017e-02):3.533327e-01,16:4.990003e-01):1.227348e-01,17:4.280274e-01):1.878021e-01,(13:6.655176e-02,14:9.259151e-02):7.175384e-01):2.308717e+00,((6:3.253423e-01,10:3.923029e-01):1.729282e-01,9:4.728408e-01):9.133833e-01):5.174199e-01,((3:5.053945e-01,15:4.376285e-01):3.203318e-01,(4:1.882968e-01,5:9.736026e-02):4.540675e-01):8.370512e-01):1.180391e+00,(11:3.162368e-04,12:3.438999e-04):2.197993e-01):6.978859e-02,8:5.805691e-02):9.676271e-02);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -38297.29 -38315.68
2 -38297.57 -38314.14
--------------------------------------
TOTAL -38297.42 -38315.19
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 12.189746 0.239712 11.303160 13.249910 12.172940 1027.40 1036.94 1.002
r(A<->C){all} 0.183159 0.000062 0.167276 0.198417 0.183099 376.61 706.55 1.000
r(A<->G){all} 0.273996 0.000087 0.255160 0.291219 0.273827 502.00 508.10 1.002
r(A<->T){all} 0.095238 0.000021 0.085959 0.103832 0.095221 703.00 812.53 1.000
r(C<->G){all} 0.120400 0.000051 0.106770 0.134523 0.120397 719.08 822.91 1.000
r(C<->T){all} 0.268801 0.000075 0.251500 0.285372 0.268645 516.51 569.04 1.002
r(G<->T){all} 0.058406 0.000015 0.050413 0.065507 0.058439 904.98 961.84 1.000
pi(A){all} 0.247913 0.000016 0.239245 0.254959 0.247983 494.71 504.91 1.000
pi(C){all} 0.190849 0.000011 0.184871 0.197486 0.190765 683.48 695.42 1.000
pi(G){all} 0.196018 0.000015 0.188050 0.203113 0.195908 627.26 645.07 1.000
pi(T){all} 0.365220 0.000024 0.355768 0.374912 0.365189 530.56 556.09 1.001
alpha{1,2} 0.525910 0.000551 0.479090 0.568085 0.525167 1066.28 1197.92 1.001
alpha{3} 4.578533 0.378930 3.458001 5.782537 4.526577 1355.44 1428.22 1.000
pinvar{all} 0.003815 0.000007 0.000002 0.008887 0.003352 1280.72 1338.79 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/JTMC15_S_ANA96027_1_2013_08_China_Bat_Bat_coronavirus.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 18 ls = 1095
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 48 51 51 46 42 37 | Ser TCT 29 30 30 23 26 33 | Tyr TAT 28 31 31 29 33 45 | Cys TGT 21 22 22 27 29 28
TTC 19 22 22 16 21 16 | TCC 8 8 8 11 9 5 | TAC 16 12 12 23 19 14 | TGC 11 10 10 8 6 7
Leu TTA 22 19 19 10 7 25 | TCA 16 25 25 15 19 16 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 17 18 18 31 28 24 | TCG 4 4 4 9 6 3 | TAG 0 0 0 0 0 0 | Trp TGG 10 8 8 13 15 11
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 27 27 27 27 29 30 | Pro CCT 23 19 19 18 14 23 | His CAT 10 7 7 6 9 9 | Arg CGT 9 8 8 11 11 12
CTC 17 16 16 12 13 8 | CCC 6 2 2 5 5 3 | CAC 5 3 3 6 3 5 | CGC 4 7 7 7 5 7
CTA 8 10 10 6 11 13 | CCA 13 17 17 12 14 24 | Gln CAA 37 28 28 19 18 33 | CGA 2 2 2 1 2 2
CTG 6 8 8 9 8 5 | CCG 2 4 4 2 4 2 | CAG 18 20 20 28 31 22 | CGG 2 2 2 3 1 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 44 43 43 36 28 32 | Thr ACT 39 31 31 40 40 37 | Asn AAT 44 56 56 43 47 66 | Ser AGT 16 18 18 17 18 24
ATC 10 12 12 13 12 8 | ACC 11 7 7 11 7 6 | AAC 23 16 16 25 20 22 | AGC 8 6 6 8 9 8
ATA 17 15 15 13 18 21 | ACA 41 41 41 25 26 39 | Lys AAA 31 25 25 11 14 19 | Arg AGA 12 16 16 11 10 6
Met ATG 15 14 14 22 23 19 | ACG 4 6 6 11 10 8 | AAG 19 23 23 15 13 11 | AGG 6 9 9 7 6 3
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 30 41 41 61 58 42 | Ala GCT 34 45 45 40 46 41 | Asp GAT 29 30 30 28 29 29 | Gly GGT 34 27 27 39 46 38
GTC 21 15 15 15 16 9 | GCC 15 12 12 12 11 7 | GAC 30 26 26 26 24 16 | GGC 16 19 19 20 14 9
GTA 12 14 14 12 11 21 | GCA 20 13 13 20 19 25 | Glu GAA 20 21 21 22 21 22 | GGA 12 12 12 6 7 9
GTG 18 16 16 22 28 27 | GCG 7 5 5 9 6 3 | GAG 15 20 20 18 17 3 | GGG 4 1 1 4 3 3
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 34 39 39 39 51 55 | Ser TCT 22 14 34 29 39 41 | Tyr TAT 29 29 29 33 39 40 | Cys TGT 27 21 23 23 21 25
TTC 18 16 18 15 7 16 | TCC 5 9 17 20 6 12 | TAC 19 19 24 22 12 14 | TGC 9 15 12 12 12 8
Leu TTA 27 22 12 18 36 37 | TCA 16 24 8 7 11 18 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 22 21 33 32 27 39 | TCG 7 7 5 3 6 5 | TAG 0 0 0 0 0 0 | Trp TGG 14 11 11 11 9 9
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 26 24 26 22 34 19 | Pro CCT 14 18 17 18 26 25 | His CAT 7 10 10 8 12 9 | Arg CGT 14 13 14 16 15 15
CTC 11 11 6 8 2 8 | CCC 3 4 2 3 4 9 | CAC 15 5 4 6 5 0 | CGC 3 11 6 5 7 4
CTA 15 8 10 6 7 7 | CCA 16 15 11 9 8 13 | Gln CAA 22 20 26 28 18 23 | CGA 2 3 4 4 7 2
CTG 11 20 16 16 6 5 | CCG 1 2 4 4 8 4 | CAG 27 31 18 18 29 33 | CGG 0 2 0 0 3 4
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 32 42 40 40 39 26 | Thr ACT 36 44 32 36 43 42 | Asn AAT 50 57 50 47 65 57 | Ser AGT 29 20 11 13 32 28
ATC 8 10 13 14 7 8 | ACC 15 10 11 13 13 11 | AAC 26 29 28 25 19 26 | AGC 10 6 12 10 5 5
ATA 13 15 11 13 26 17 | ACA 32 26 44 42 14 20 | Lys AAA 19 7 20 20 11 6 | Arg AGA 12 9 11 11 2 5
Met ATG 14 17 17 18 22 15 | ACG 10 8 2 3 13 10 | AAG 13 16 17 17 17 20 | AGG 3 4 7 6 7 6
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 47 44 36 37 39 51 | Ala GCT 38 34 44 41 44 38 | Asp GAT 27 27 25 29 31 28 | Gly GGT 48 50 42 44 40 36
GTC 23 14 29 25 7 14 | GCC 17 7 10 12 11 15 | GAC 18 27 27 25 14 13 | GGC 16 17 18 16 14 14
GTA 13 14 12 8 20 12 | GCA 15 22 16 16 19 17 | Glu GAA 27 13 21 18 6 16 | GGA 5 6 4 5 3 3
GTG 23 26 18 25 22 21 | GCG 1 6 3 3 10 5 | GAG 15 21 21 22 13 8 | GGG 4 3 4 6 0 3
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 48 48 49 52 44 38 | Ser TCT 39 41 27 30 38 35 | Tyr TAT 36 54 28 29 42 31 | Cys TGT 23 29 23 23 24 23
TTC 20 11 18 20 11 24 | TCC 17 9 11 10 13 17 | TAC 21 11 18 17 26 30 | TGC 10 8 9 9 13 13
Leu TTA 35 33 22 24 11 16 | TCA 17 26 16 20 14 20 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 35 20 17 13 17 12 | TCG 5 8 3 4 2 5 | TAG 0 0 0 0 0 0 | Trp TGG 10 8 10 10 10 8
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 22 29 27 25 35 32 | Pro CCT 24 24 24 18 23 23 | His CAT 9 9 9 9 8 13 | Arg CGT 13 12 9 9 17 11
CTC 7 8 17 22 15 18 | CCC 6 3 5 7 8 5 | CAC 0 2 4 2 5 5 | CGC 5 3 4 3 6 8
CTA 8 8 8 7 13 10 | CCA 18 11 13 15 11 12 | Gln CAA 17 23 36 36 27 27 | CGA 2 1 2 1 0 0
CTG 6 5 6 3 8 8 | CCG 2 1 1 2 1 3 | CAG 36 21 19 21 27 32 | CGG 2 2 2 2 2 5
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 23 28 44 40 34 28 | Thr ACT 37 46 40 42 39 30 | Asn AAT 70 52 44 45 58 44 | Ser AGT 25 19 16 13 14 16
ATC 13 10 10 10 12 10 | ACC 22 8 10 12 15 16 | AAC 17 18 23 21 23 23 | AGC 6 2 8 11 7 7
ATA 18 18 18 15 18 12 | ACA 18 20 40 35 21 16 | Lys AAA 6 21 30 39 22 10 | Arg AGA 6 14 12 18 5 10
Met ATG 14 16 15 16 13 18 | ACG 9 0 5 3 3 13 | AAG 23 19 20 14 17 25 | AGG 6 9 6 6 5 9
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 56 43 30 35 37 34 | Ala GCT 37 42 34 30 43 39 | Asp GAT 36 43 35 34 33 25 | Gly GGT 31 51 34 30 41 37
GTC 8 10 22 23 16 20 | GCC 13 9 16 14 11 18 | GAC 5 15 24 24 20 25 | GGC 16 15 16 20 28 20
GTA 9 13 11 9 4 6 | GCA 15 21 21 23 19 11 | Glu GAA 16 20 20 19 22 20 | GGA 6 7 12 12 6 7
GTG 18 14 18 22 15 20 | GCG 8 1 5 2 6 8 | GAG 10 17 15 14 14 25 | GGG 5 6 4 1 3 9
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C1
position 1: T:0.22740 C:0.17260 A:0.31050 G:0.28950
position 2: T:0.30228 C:0.24840 A:0.29680 G:0.15251
position 3: T:0.42466 C:0.20091 A:0.24018 G:0.13425
Average T:0.31811 C:0.20731 A:0.28250 G:0.19209
#2: C2
position 1: T:0.23744 C:0.16438 A:0.30868 G:0.28950
position 2: T:0.31142 C:0.24566 A:0.29041 G:0.15251
position 3: T:0.44384 C:0.17626 A:0.23562 G:0.14429
Average T:0.33090 C:0.19543 A:0.27823 G:0.19543
#3: C3
position 1: T:0.23744 C:0.16438 A:0.30868 G:0.28950
position 2: T:0.31142 C:0.24566 A:0.29041 G:0.15251
position 3: T:0.44384 C:0.17626 A:0.23562 G:0.14429
Average T:0.33090 C:0.19543 A:0.27823 G:0.19543
#4: C4
position 1: T:0.23836 C:0.15708 A:0.28128 G:0.32329
position 2: T:0.32055 C:0.24018 A:0.27306 G:0.16621
position 3: T:0.44840 C:0.19909 A:0.16712 G:0.18539
Average T:0.33577 C:0.19878 A:0.24049 G:0.22496
#5: C5
position 1: T:0.23744 C:0.16256 A:0.27489 G:0.32511
position 2: T:0.32237 C:0.23927 A:0.27215 G:0.16621
position 3: T:0.46119 C:0.17717 A:0.17991 G:0.18174
Average T:0.34033 C:0.19300 A:0.24231 G:0.22435
#6: C6
position 1: T:0.24110 C:0.18082 A:0.30046 G:0.27763
position 2: T:0.30776 C:0.25114 A:0.28858 G:0.15251
position 3: T:0.48037 C:0.13699 A:0.25114 G:0.13151
Average T:0.34307 C:0.18965 A:0.28006 G:0.18721
#7: C7
position 1: T:0.22740 C:0.17078 A:0.29406 G:0.30776
position 2: T:0.30776 C:0.22648 A:0.28676 G:0.17900
position 3: T:0.43836 C:0.19726 A:0.21370 G:0.15068
Average T:0.32451 C:0.19817 A:0.26484 G:0.21248
#8: C8
position 1: T:0.22557 C:0.17991 A:0.29224 G:0.30228
position 2: T:0.31324 C:0.22831 A:0.28402 G:0.17443
position 3: T:0.44384 C:0.19178 A:0.18630 G:0.17808
Average T:0.32755 C:0.20000 A:0.25419 G:0.21826
#9: C9
position 1: T:0.24201 C:0.15890 A:0.29772 G:0.30137
position 2: T:0.30685 C:0.23744 A:0.29224 G:0.16347
position 3: T:0.43105 C:0.21644 A:0.19178 G:0.16073
Average T:0.32664 C:0.20426 A:0.26058 G:0.20852
#10: C10
position 1: T:0.24110 C:0.15616 A:0.29954 G:0.30320
position 2: T:0.30685 C:0.23653 A:0.29041 G:0.16621
position 3: T:0.43379 C:0.21096 A:0.18721 G:0.16804
Average T:0.32725 C:0.20122 A:0.25906 G:0.21248
#11: C11
position 1: T:0.25205 C:0.17443 A:0.30594 G:0.26758
position 2: T:0.32146 C:0.25114 A:0.26575 G:0.16164
position 3: T:0.52055 C:0.13242 A:0.17169 G:0.17534
Average T:0.36469 C:0.18600 A:0.24779 G:0.20152
#12: C12
position 1: T:0.29132 C:0.16438 A:0.27580 G:0.26849
position 2: T:0.31963 C:0.26027 A:0.26758 G:0.15251
position 3: T:0.48858 C:0.16164 A:0.17900 G:0.17078
Average T:0.36651 C:0.19543 A:0.24079 G:0.19726
#13: C13
position 1: T:0.28858 C:0.16164 A:0.28584 G:0.26393
position 2: T:0.31050 C:0.26210 A:0.27580 G:0.15160
position 3: T:0.48311 C:0.16986 A:0.17443 G:0.17260
Average T:0.36073 C:0.19787 A:0.24536 G:0.19604
#14: C14
position 1: T:0.27945 C:0.14795 A:0.27397 G:0.29863
position 2: T:0.28676 C:0.24658 A:0.29680 G:0.16986
position 3: T:0.52055 C:0.12968 A:0.21553 G:0.13425
Average T:0.36225 C:0.17473 A:0.26210 G:0.20091
#15: C15
position 1: T:0.22922 C:0.16986 A:0.31142 G:0.28950
position 2: T:0.30320 C:0.24749 A:0.29680 G:0.15251
position 3: T:0.43196 C:0.19635 A:0.23836 G:0.13333
Average T:0.32146 C:0.20457 A:0.28219 G:0.19178
#16: C16
position 1: T:0.23836 C:0.16621 A:0.31050 G:0.28493
position 2: T:0.30685 C:0.24384 A:0.29589 G:0.15342
position 3: T:0.42374 C:0.20548 A:0.24932 G:0.12146
Average T:0.32298 C:0.20518 A:0.28524 G:0.18661
#17: C17
position 1: T:0.24201 C:0.18813 A:0.27945 G:0.29041
position 2: T:0.27671 C:0.24384 A:0.31416 G:0.16530
position 3: T:0.48402 C:0.20913 A:0.17626 G:0.13059
Average T:0.33425 C:0.21370 A:0.25662 G:0.19543
#18: C18
position 1: T:0.24840 C:0.19361 A:0.26210 G:0.29589
position 2: T:0.27945 C:0.24749 A:0.30594 G:0.16712
position 3: T:0.41918 C:0.23653 A:0.16164 G:0.18265
Average T:0.31568 C:0.22588 A:0.24323 G:0.21522
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 811 | Ser S TCT 560 | Tyr Y TAT 616 | Cys C TGT 434
TTC 310 | TCC 195 | TAC 329 | TGC 182
Leu L TTA 395 | TCA 313 | *** * TAA 0 | *** * TGA 0
TTG 424 | TCG 90 | TAG 0 | Trp W TGG 186
------------------------------------------------------------------------------
Leu L CTT 488 | Pro P CCT 370 | His H CAT 161 | Arg R CGT 217
CTC 215 | CCC 82 | CAC 78 | CGC 102
CTA 165 | CCA 249 | Gln Q CAA 466 | CGA 39
CTG 154 | CCG 51 | CAG 451 | CGG 34
------------------------------------------------------------------------------
Ile I ATT 642 | Thr T ACT 685 | Asn N AAT 951 | Ser S AGT 347
ATC 192 | ACC 205 | AAC 400 | AGC 134
ATA 293 | ACA 541 | Lys K AAA 336 | Arg R AGA 186
Met M ATG 302 | ACG 124 | AAG 322 | AGG 114
------------------------------------------------------------------------------
Val V GTT 762 | Ala A GCT 715 | Asp D GAT 548 | Gly G GGT 695
GTC 302 | GCC 222 | GAC 385 | GGC 307
GTA 215 | GCA 325 | Glu E GAA 345 | GGA 134
GTG 369 | GCG 93 | GAG 288 | GGG 64
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.24581 C:0.16854 A:0.29295 G:0.29269
position 2: T:0.30639 C:0.24455 A:0.28798 G:0.16109
position 3: T:0.45672 C:0.18468 A:0.20304 G:0.15556
Average T:0.33631 C:0.19926 A:0.26132 G:0.20311
Model 1: NearlyNeutral (2 categories)
TREE # 1: (1, 15, ((((((((10, 9), 7), 8), (4, 5)), ((14, 18), 17)), ((11, 6), (12, 13))), (2, 3)), 16)); MP score: 8359
lnL(ntime: 33 np: 36): -44058.026466 +0.000000
19..1 19..15 19..20 20..21 21..22 22..23 23..24 24..25 25..26 26..27 27..10 27..9 26..7 25..8 24..28 28..4 28..5 23..29 29..30 30..14 30..18 29..17 22..31 31..32 32..11 32..6 31..33 33..12 33..13 21..34 34..2 34..3 20..16
0.017636 0.011444 0.355787 0.276635 5.439946 1.998729 7.493182 1.447721 0.459696 1.390553 0.180256 0.098172 2.027142 1.722749 2.955018 0.134571 0.207679 4.070775 0.986768 1.246279 1.463065 2.238698 3.747099 1.833072 2.035827 1.917466 2.502723 0.502836 0.359043 0.581169 0.000004 0.000004 0.203582 1.384142 0.901605 0.056110
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 49.905327
(1: 0.017636, 15: 0.011444, ((((((((10: 0.180256, 9: 0.098172): 1.390553, 7: 2.027142): 0.459696, 8: 1.722749): 1.447721, (4: 0.134571, 5: 0.207679): 2.955018): 7.493182, ((14: 1.246279, 18: 1.463065): 0.986768, 17: 2.238698): 4.070775): 1.998729, ((11: 2.035827, 6: 1.917466): 1.833072, (12: 0.502836, 13: 0.359043): 2.502723): 3.747099): 5.439946, (2: 0.000004, 3: 0.000004): 0.581169): 0.276635, 16: 0.203582): 0.355787);
(C1: 0.017636, C15: 0.011444, ((((((((C10: 0.180256, C9: 0.098172): 1.390553, C7: 2.027142): 0.459696, C8: 1.722749): 1.447721, (C4: 0.134571, C5: 0.207679): 2.955018): 7.493182, ((C14: 1.246279, C18: 1.463065): 0.986768, C17: 2.238698): 4.070775): 1.998729, ((C11: 2.035827, C6: 1.917466): 1.833072, (C12: 0.502836, C13: 0.359043): 2.502723): 3.747099): 5.439946, (C2: 0.000004, C3: 0.000004): 0.581169): 0.276635, C16: 0.203582): 0.355787);
Detailed output identifying parameters
kappa (ts/tv) = 1.38414
MLEs of dN/dS (w) for site classes (K=2)
p: 0.90160 0.09840
w: 0.05611 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
19..1 0.018 2607.0 678.0 0.1490 0.0027 0.0181 7.0 12.3
19..15 0.011 2607.0 678.0 0.1490 0.0018 0.0118 4.6 8.0
19..20 0.356 2607.0 678.0 0.1490 0.0544 0.3653 141.9 247.7
20..21 0.277 2607.0 678.0 0.1490 0.0423 0.2841 110.3 192.6
21..22 5.440 2607.0 678.0 0.1490 0.8322 5.5859 2169.6 3787.1
22..23 1.999 2607.0 678.0 0.1490 0.3058 2.0524 797.1 1391.5
23..24 7.493 2607.0 678.0 0.1490 1.1463 7.6942 2988.5 5216.5
24..25 1.448 2607.0 678.0 0.1490 0.2215 1.4866 577.4 1007.9
25..26 0.460 2607.0 678.0 0.1490 0.0703 0.4720 183.3 320.0
26..27 1.391 2607.0 678.0 0.1490 0.2127 1.4279 554.6 968.1
27..10 0.180 2607.0 678.0 0.1490 0.0276 0.1851 71.9 125.5
27..9 0.098 2607.0 678.0 0.1490 0.0150 0.1008 39.2 68.3
26..7 2.027 2607.0 678.0 0.1490 0.3101 2.0815 808.5 1411.2
25..8 1.723 2607.0 678.0 0.1490 0.2635 1.7690 687.1 1199.3
24..28 2.955 2607.0 678.0 0.1490 0.4521 3.0343 1178.5 2057.2
28..4 0.135 2607.0 678.0 0.1490 0.0206 0.1382 53.7 93.7
28..5 0.208 2607.0 678.0 0.1490 0.0318 0.2133 82.8 144.6
23..29 4.071 2607.0 678.0 0.1490 0.6228 4.1800 1623.5 2834.0
29..30 0.987 2607.0 678.0 0.1490 0.1510 1.0132 393.6 687.0
30..14 1.246 2607.0 678.0 0.1490 0.1907 1.2797 497.1 867.6
30..18 1.463 2607.0 678.0 0.1490 0.2238 1.5023 583.5 1018.5
29..17 2.239 2607.0 678.0 0.1490 0.3425 2.2988 892.9 1558.5
22..31 3.747 2607.0 678.0 0.1490 0.5732 3.8476 1494.4 2608.6
31..32 1.833 2607.0 678.0 0.1490 0.2804 1.8823 731.1 1276.1
32..11 2.036 2607.0 678.0 0.1490 0.3114 2.0905 811.9 1417.3
32..6 1.917 2607.0 678.0 0.1490 0.2933 1.9689 764.7 1334.9
31..33 2.503 2607.0 678.0 0.1490 0.3829 2.5699 998.2 1742.3
33..12 0.503 2607.0 678.0 0.1490 0.0769 0.5163 200.5 350.1
33..13 0.359 2607.0 678.0 0.1490 0.0549 0.3687 143.2 250.0
21..34 0.581 2607.0 678.0 0.1490 0.0889 0.5968 231.8 404.6
34..2 0.000 2607.0 678.0 0.1490 0.0000 0.0000 0.0 0.0
34..3 0.000 2607.0 678.0 0.1490 0.0000 0.0000 0.0 0.0
20..16 0.204 2607.0 678.0 0.1490 0.0311 0.2090 81.2 141.7
Time used: 9:18
Model 2: PositiveSelection (3 categories)
TREE # 1: (1, 15, ((((((((10, 9), 7), 8), (4, 5)), ((14, 18), 17)), ((11, 6), (12, 13))), (2, 3)), 16)); MP score: 8359
lnL(ntime: 33 np: 38): -44058.026466 +0.000000
19..1 19..15 19..20 20..21 21..22 22..23 23..24 24..25 25..26 26..27 27..10 27..9 26..7 25..8 24..28 28..4 28..5 23..29 29..30 30..14 30..18 29..17 22..31 31..32 32..11 32..6 31..33 33..12 33..13 21..34 34..2 34..3 20..16
0.017636 0.011444 0.355787 0.276635 5.439945 1.998728 7.493181 1.447722 0.459696 1.390553 0.180256 0.098172 2.027142 1.722748 2.955017 0.134571 0.207679 4.070775 0.986770 1.246279 1.463065 2.238697 3.747098 1.833072 2.035827 1.917466 2.502723 0.502836 0.359043 0.581169 0.000004 0.000004 0.203582 1.384142 0.901605 0.080052 0.056110 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 49.905321
(1: 0.017636, 15: 0.011444, ((((((((10: 0.180256, 9: 0.098172): 1.390553, 7: 2.027142): 0.459696, 8: 1.722748): 1.447722, (4: 0.134571, 5: 0.207679): 2.955017): 7.493181, ((14: 1.246279, 18: 1.463065): 0.986770, 17: 2.238697): 4.070775): 1.998728, ((11: 2.035827, 6: 1.917466): 1.833072, (12: 0.502836, 13: 0.359043): 2.502723): 3.747098): 5.439945, (2: 0.000004, 3: 0.000004): 0.581169): 0.276635, 16: 0.203582): 0.355787);
(C1: 0.017636, C15: 0.011444, ((((((((C10: 0.180256, C9: 0.098172): 1.390553, C7: 2.027142): 0.459696, C8: 1.722748): 1.447722, (C4: 0.134571, C5: 0.207679): 2.955017): 7.493181, ((C14: 1.246279, C18: 1.463065): 0.986770, C17: 2.238697): 4.070775): 1.998728, ((C11: 2.035827, C6: 1.917466): 1.833072, (C12: 0.502836, C13: 0.359043): 2.502723): 3.747098): 5.439945, (C2: 0.000004, C3: 0.000004): 0.581169): 0.276635, C16: 0.203582): 0.355787);
Detailed output identifying parameters
kappa (ts/tv) = 1.38414
MLEs of dN/dS (w) for site classes (K=3)
p: 0.90160 0.08005 0.01834
w: 0.05611 1.00000 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
19..1 0.018 2607.0 678.0 0.1490 0.0027 0.0181 7.0 12.3
19..15 0.011 2607.0 678.0 0.1490 0.0018 0.0118 4.6 8.0
19..20 0.356 2607.0 678.0 0.1490 0.0544 0.3653 141.9 247.7
20..21 0.277 2607.0 678.0 0.1490 0.0423 0.2841 110.3 192.6
21..22 5.440 2607.0 678.0 0.1490 0.8322 5.5859 2169.6 3787.1
22..23 1.999 2607.0 678.0 0.1490 0.3058 2.0524 797.1 1391.5
23..24 7.493 2607.0 678.0 0.1490 1.1463 7.6942 2988.5 5216.5
24..25 1.448 2607.0 678.0 0.1490 0.2215 1.4866 577.4 1007.9
25..26 0.460 2607.0 678.0 0.1490 0.0703 0.4720 183.3 320.0
26..27 1.391 2607.0 678.0 0.1490 0.2127 1.4279 554.6 968.1
27..10 0.180 2607.0 678.0 0.1490 0.0276 0.1851 71.9 125.5
27..9 0.098 2607.0 678.0 0.1490 0.0150 0.1008 39.2 68.3
26..7 2.027 2607.0 678.0 0.1490 0.3101 2.0815 808.5 1411.2
25..8 1.723 2607.0 678.0 0.1490 0.2635 1.7690 687.1 1199.3
24..28 2.955 2607.0 678.0 0.1490 0.4521 3.0343 1178.5 2057.2
28..4 0.135 2607.0 678.0 0.1490 0.0206 0.1382 53.7 93.7
28..5 0.208 2607.0 678.0 0.1490 0.0318 0.2133 82.8 144.6
23..29 4.071 2607.0 678.0 0.1490 0.6228 4.1800 1623.5 2834.0
29..30 0.987 2607.0 678.0 0.1490 0.1510 1.0132 393.6 687.0
30..14 1.246 2607.0 678.0 0.1490 0.1907 1.2797 497.1 867.6
30..18 1.463 2607.0 678.0 0.1490 0.2238 1.5023 583.5 1018.5
29..17 2.239 2607.0 678.0 0.1490 0.3425 2.2988 892.9 1558.5
22..31 3.747 2607.0 678.0 0.1490 0.5732 3.8476 1494.4 2608.6
31..32 1.833 2607.0 678.0 0.1490 0.2804 1.8823 731.1 1276.1
32..11 2.036 2607.0 678.0 0.1490 0.3114 2.0905 811.9 1417.3
32..6 1.917 2607.0 678.0 0.1490 0.2933 1.9689 764.7 1334.9
31..33 2.503 2607.0 678.0 0.1490 0.3829 2.5699 998.2 1742.3
33..12 0.503 2607.0 678.0 0.1490 0.0769 0.5163 200.5 350.1
33..13 0.359 2607.0 678.0 0.1490 0.0549 0.3687 143.2 250.0
21..34 0.581 2607.0 678.0 0.1490 0.0889 0.5968 231.8 404.6
34..2 0.000 2607.0 678.0 0.1490 0.0000 0.0000 0.0 0.0
34..3 0.000 2607.0 678.0 0.1490 0.0000 0.0000 0.0 0.0
20..16 0.204 2607.0 678.0 0.1490 0.0311 0.2090 81.2 141.7
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
129 I 0.656 1.444 +- 0.649
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.933 0.040 0.014 0.006 0.003 0.001 0.001 0.001 0.000 0.000
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
sum of density on p0-p1 = 1.000000
Time used: 24:07
Model 7: beta (10 categories)
TREE # 1: (1, 15, ((((((((10, 9), 7), 8), (4, 5)), ((14, 18), 17)), ((11, 6), (12, 13))), (2, 3)), 16)); MP score: 8359
lnL(ntime: 33 np: 36): -43318.986989 +0.000000
19..1 19..15 19..20 20..21 21..22 22..23 23..24 24..25 25..26 26..27 27..10 27..9 26..7 25..8 24..28 28..4 28..5 23..29 29..30 30..14 30..18 29..17 22..31 31..32 32..11 32..6 31..33 33..12 33..13 21..34 34..2 34..3 20..16
0.017981 0.010853 0.350770 0.241425 6.090311 3.094714 12.279190 1.028332 0.388800 1.241739 0.172544 0.107936 1.838123 1.530394 3.017956 0.142818 0.200569 4.464524 0.870943 1.213189 1.372832 2.147351 4.938189 1.971619 1.899346 1.681562 2.084499 0.540706 0.332147 0.590494 0.000004 0.000004 0.214609 1.351185 0.842588 9.434070
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 56.076472
(1: 0.017981, 15: 0.010853, ((((((((10: 0.172544, 9: 0.107936): 1.241739, 7: 1.838123): 0.388800, 8: 1.530394): 1.028332, (4: 0.142818, 5: 0.200569): 3.017956): 12.279190, ((14: 1.213189, 18: 1.372832): 0.870943, 17: 2.147351): 4.464524): 3.094714, ((11: 1.899346, 6: 1.681562): 1.971619, (12: 0.540706, 13: 0.332147): 2.084499): 4.938189): 6.090311, (2: 0.000004, 3: 0.000004): 0.590494): 0.241425, 16: 0.214609): 0.350770);
(C1: 0.017981, C15: 0.010853, ((((((((C10: 0.172544, C9: 0.107936): 1.241739, C7: 1.838123): 0.388800, C8: 1.530394): 1.028332, (C4: 0.142818, C5: 0.200569): 3.017956): 12.279190, ((C14: 1.213189, C18: 1.372832): 0.870943, C17: 2.147351): 4.464524): 3.094714, ((C11: 1.899346, C6: 1.681562): 1.971619, (C12: 0.540706, C13: 0.332147): 2.084499): 4.938189): 6.090311, (C2: 0.000004, C3: 0.000004): 0.590494): 0.241425, C16: 0.214609): 0.350770);
Detailed output identifying parameters
kappa (ts/tv) = 1.35119
Parameters in M7 (beta):
p = 0.84259 q = 9.43407
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00289 0.01104 0.02118 0.03333 0.04788 0.06556 0.08775 0.11720 0.16088 0.24925
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
19..1 0.018 2609.6 675.4 0.0797 0.0018 0.0223 4.6 15.1
19..15 0.011 2609.6 675.4 0.0797 0.0011 0.0135 2.8 9.1
19..20 0.351 2609.6 675.4 0.0797 0.0347 0.4348 90.4 293.7
20..21 0.241 2609.6 675.4 0.0797 0.0238 0.2992 62.2 202.1
21..22 6.090 2609.6 675.4 0.0797 0.6016 7.5490 1570.0 5098.9
22..23 3.095 2609.6 675.4 0.0797 0.3057 3.8359 797.8 2591.0
23..24 12.279 2609.6 675.4 0.0797 1.2130 15.2202 3165.3 10280.4
24..25 1.028 2609.6 675.4 0.0797 0.1016 1.2746 265.1 860.9
25..26 0.389 2609.6 675.4 0.0797 0.0384 0.4819 100.2 325.5
26..27 1.242 2609.6 675.4 0.0797 0.1227 1.5392 320.1 1039.6
27..10 0.173 2609.6 675.4 0.0797 0.0170 0.2139 44.5 144.5
27..9 0.108 2609.6 675.4 0.0797 0.0107 0.1338 27.8 90.4
26..7 1.838 2609.6 675.4 0.0797 0.1816 2.2784 473.8 1538.9
25..8 1.530 2609.6 675.4 0.0797 0.1512 1.8969 394.5 1281.3
24..28 3.018 2609.6 675.4 0.0797 0.2981 3.7408 778.0 2526.7
28..4 0.143 2609.6 675.4 0.0797 0.0141 0.1770 36.8 119.6
28..5 0.201 2609.6 675.4 0.0797 0.0198 0.2486 51.7 167.9
23..29 4.465 2609.6 675.4 0.0797 0.4410 5.5338 1150.9 3737.8
29..30 0.871 2609.6 675.4 0.0797 0.0860 1.0795 224.5 729.2
30..14 1.213 2609.6 675.4 0.0797 0.1198 1.5038 312.7 1015.7
30..18 1.373 2609.6 675.4 0.0797 0.1356 1.7016 353.9 1149.4
29..17 2.147 2609.6 675.4 0.0797 0.2121 2.6617 553.5 1797.8
22..31 4.938 2609.6 675.4 0.0797 0.4878 6.1210 1273.0 4134.4
31..32 1.972 2609.6 675.4 0.0797 0.1948 2.4439 508.2 1650.7
32..11 1.899 2609.6 675.4 0.0797 0.1876 2.3543 489.6 1590.2
32..6 1.682 2609.6 675.4 0.0797 0.1661 2.0843 433.5 1407.8
31..33 2.084 2609.6 675.4 0.0797 0.2059 2.5838 537.3 1745.2
33..12 0.541 2609.6 675.4 0.0797 0.0534 0.6702 139.4 452.7
33..13 0.332 2609.6 675.4 0.0797 0.0328 0.4117 85.6 278.1
21..34 0.590 2609.6 675.4 0.0797 0.0583 0.7319 152.2 494.4
34..2 0.000 2609.6 675.4 0.0797 0.0000 0.0000 0.0 0.0
34..3 0.000 2609.6 675.4 0.0797 0.0000 0.0000 0.0 0.0
20..16 0.215 2609.6 675.4 0.0797 0.0212 0.2660 55.3 179.7
Time used: 2:12:53
Model 8: beta&w>1 (11 categories)
TREE # 1: (1, 15, ((((((((10, 9), 7), 8), (4, 5)), ((14, 18), 17)), ((11, 6), (12, 13))), (2, 3)), 16)); MP score: 8359
lnL(ntime: 33 np: 38): -43297.312135 +0.000000
19..1 19..15 19..20 20..21 21..22 22..23 23..24 24..25 25..26 26..27 27..10 27..9 26..7 25..8 24..28 28..4 28..5 23..29 29..30 30..14 30..18 29..17 22..31 31..32 32..11 32..6 31..33 33..12 33..13 21..34 34..2 34..3 20..16
0.018658 0.010384 0.365860 0.254131 6.644663 3.362294 13.279032 1.146070 0.416676 1.376899 0.167444 0.115933 2.034109 1.693566 3.353374 0.136489 0.213417 4.894774 0.953029 1.317761 1.500144 2.341672 5.389736 2.170693 2.087111 1.866294 2.303593 0.552612 0.351951 0.622920 0.000004 0.000004 0.208870 1.349537 0.987405 0.893678 11.307453 1.961831
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 61.150164
(1: 0.018658, 15: 0.010384, ((((((((10: 0.167444, 9: 0.115933): 1.376899, 7: 2.034109): 0.416676, 8: 1.693566): 1.146070, (4: 0.136489, 5: 0.213417): 3.353374): 13.279032, ((14: 1.317761, 18: 1.500144): 0.953029, 17: 2.341672): 4.894774): 3.362294, ((11: 2.087111, 6: 1.866294): 2.170693, (12: 0.552612, 13: 0.351951): 2.303593): 5.389736): 6.644663, (2: 0.000004, 3: 0.000004): 0.622920): 0.254131, 16: 0.208870): 0.365860);
(C1: 0.018658, C15: 0.010384, ((((((((C10: 0.167444, C9: 0.115933): 1.376899, C7: 2.034109): 0.416676, C8: 1.693566): 1.146070, (C4: 0.136489, C5: 0.213417): 3.353374): 13.279032, ((C14: 1.317761, C18: 1.500144): 0.953029, C17: 2.341672): 4.894774): 3.362294, ((C11: 2.087111, C6: 1.866294): 2.170693, (C12: 0.552612, C13: 0.351951): 2.303593): 5.389736): 6.644663, (C2: 0.000004, C3: 0.000004): 0.622920): 0.254131, C16: 0.208870): 0.365860);
Detailed output identifying parameters
kappa (ts/tv) = 1.34954
Parameters in M8 (beta&w>1):
p0 = 0.98740 p = 0.89368 q = 11.30745
(p1 = 0.01260) w = 1.96183
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09874 0.09874 0.09874 0.09874 0.09874 0.09874 0.09874 0.09874 0.09874 0.09874 0.01260
w: 0.00302 0.01076 0.02003 0.03091 0.04377 0.05926 0.07860 0.10419 0.14213 0.21928 1.96183
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
19..1 0.019 2609.7 675.3 0.0950 0.0021 0.0221 5.5 14.9
19..15 0.010 2609.7 675.3 0.0950 0.0012 0.0123 3.1 8.3
19..20 0.366 2609.7 675.3 0.0950 0.0412 0.4339 107.6 293.0
20..21 0.254 2609.7 675.3 0.0950 0.0286 0.3014 74.7 203.5
21..22 6.645 2609.7 675.3 0.0950 0.7487 7.8807 1954.0 5321.9
22..23 3.362 2609.7 675.3 0.0950 0.3789 3.9878 988.7 2693.0
23..24 13.279 2609.7 675.3 0.0950 1.4963 15.7492 3904.9 10635.7
24..25 1.146 2609.7 675.3 0.0950 0.1291 1.3593 337.0 917.9
25..26 0.417 2609.7 675.3 0.0950 0.0470 0.4942 122.5 333.7
26..27 1.377 2609.7 675.3 0.0950 0.1552 1.6330 404.9 1102.8
27..10 0.167 2609.7 675.3 0.0950 0.0189 0.1986 49.2 134.1
27..9 0.116 2609.7 675.3 0.0950 0.0131 0.1375 34.1 92.9
26..7 2.034 2609.7 675.3 0.0950 0.2292 2.4125 598.2 1629.2
25..8 1.694 2609.7 675.3 0.0950 0.1908 2.0086 498.0 1356.4
24..28 3.353 2609.7 675.3 0.0950 0.3779 3.9772 986.1 2685.8
28..4 0.136 2609.7 675.3 0.0950 0.0154 0.1619 40.1 109.3
28..5 0.213 2609.7 675.3 0.0950 0.0240 0.2531 62.8 170.9
23..29 4.895 2609.7 675.3 0.0950 0.5516 5.8053 1439.4 3920.4
29..30 0.953 2609.7 675.3 0.0950 0.1074 1.1303 280.3 763.3
30..14 1.318 2609.7 675.3 0.0950 0.1485 1.5629 387.5 1055.4
30..18 1.500 2609.7 675.3 0.0950 0.1690 1.7792 441.1 1201.5
29..17 2.342 2609.7 675.3 0.0950 0.2639 2.7773 688.6 1875.5
22..31 5.390 2609.7 675.3 0.0950 0.6073 6.3923 1584.9 4316.8
31..32 2.171 2609.7 675.3 0.0950 0.2446 2.5745 638.3 1738.6
32..11 2.087 2609.7 675.3 0.0950 0.2352 2.4754 613.7 1671.6
32..6 1.866 2609.7 675.3 0.0950 0.2103 2.2135 548.8 1494.8
31..33 2.304 2609.7 675.3 0.0950 0.2596 2.7321 677.4 1845.0
33..12 0.553 2609.7 675.3 0.0950 0.0623 0.6554 162.5 442.6
33..13 0.352 2609.7 675.3 0.0950 0.0397 0.4174 103.5 281.9
21..34 0.623 2609.7 675.3 0.0950 0.0702 0.7388 183.2 498.9
34..2 0.000 2609.7 675.3 0.0950 0.0000 0.0000 0.0 0.0
34..3 0.000 2609.7 675.3 0.0950 0.0000 0.0000 0.0 0.0
20..16 0.209 2609.7 675.3 0.0950 0.0235 0.2477 61.4 167.3
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
13 T 0.808 1.626
15 F 0.998** 1.959
16 S 0.859 1.716
59 S 0.997** 1.957
101 G 0.575 1.215
116 A 0.975* 1.918
129 I 1.000** 1.961
225 S 0.720 1.472
262 T 0.865 1.726
428 P 0.852 1.702
450 D 0.653 1.349
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
13 T 0.700 1.289 +- 0.559
15 F 0.928 1.541 +- 0.398
16 S 0.712 1.303 +- 0.548
18 P 0.530 1.079 +- 0.583
59 S 0.958* 1.570 +- 0.378
101 G 0.670 1.241 +- 0.601
116 A 0.865 1.477 +- 0.463
126 A 0.637 1.180 +- 0.627
129 I 0.986* 1.595 +- 0.347
132 D 0.601 1.156 +- 0.627
142 A 0.657 1.217 +- 0.620
144 V 0.629 1.179 +- 0.626
225 S 0.635 1.210 +- 0.550
262 T 0.791 1.388 +- 0.506
428 P 0.792 1.391 +- 0.518
450 D 0.778 1.360 +- 0.555
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.006 0.166 0.828
ws: 0.901 0.093 0.005 0.000 0.000 0.000 0.000 0.000 0.000 0.000
Time used: 3:13:17
Model 1: NearlyNeutral -44058.026466
Model 2: PositiveSelection -44058.026466
Model 7: beta -43318.986989
Model 8: beta&w>1 -43297.312135
Model 2 vs 1 0
Model 8 vs 7 43.349708
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
13 T 0.808 1.626
15 F 0.998** 1.959
16 S 0.859 1.716
59 S 0.997** 1.957
101 G 0.575 1.215
116 A 0.975* 1.918
129 I 1.000** 1.961
225 S 0.720 1.472
262 T 0.865 1.726
428 P 0.852 1.702
450 D 0.653 1.349
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
13 T 0.700 1.289 +- 0.559
15 F 0.928 1.541 +- 0.398
16 S 0.712 1.303 +- 0.548
18 P 0.530 1.079 +- 0.583
59 S 0.958* 1.570 +- 0.378
101 G 0.670 1.241 +- 0.601
116 A 0.865 1.477 +- 0.463
126 A 0.637 1.180 +- 0.627
129 I 0.986* 1.595 +- 0.347
132 D 0.601 1.156 +- 0.627
142 A 0.657 1.217 +- 0.620
144 V 0.629 1.179 +- 0.626
225 S 0.635 1.210 +- 0.550
262 T 0.791 1.388 +- 0.506
428 P 0.792 1.391 +- 0.518
450 D 0.778 1.360 +- 0.555
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
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N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
