--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2372.32 -2388.17
2 -2372.26 -2388.42
--------------------------------------
TOTAL -2372.29 -2388.30
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.653972 0.007728 0.489211 0.826482 0.647555 1153.48 1173.11 1.000
r(A<->C){all} 0.039151 0.000296 0.007459 0.072278 0.037306 831.72 849.96 1.000
r(A<->G){all} 0.271796 0.001990 0.191743 0.359718 0.270352 799.18 826.62 1.002
r(A<->T){all} 0.049871 0.000169 0.024782 0.074535 0.048647 921.05 1090.10 1.001
r(C<->G){all} 0.026005 0.000323 0.000239 0.061663 0.023120 792.21 813.60 1.000
r(C<->T){all} 0.577163 0.002604 0.482769 0.679538 0.578089 717.84 752.38 1.002
r(G<->T){all} 0.036015 0.000197 0.011981 0.064879 0.034433 908.52 927.62 1.000
pi(A){all} 0.312353 0.000220 0.282297 0.340560 0.312235 1111.34 1188.42 1.000
pi(C){all} 0.161779 0.000124 0.141540 0.184300 0.161479 1174.35 1179.88 1.000
pi(G){all} 0.198559 0.000173 0.171646 0.222606 0.198149 1054.67 1162.38 1.000
pi(T){all} 0.327309 0.000218 0.298656 0.355812 0.327208 1127.29 1182.67 1.000
alpha{1,2} 0.119615 0.001122 0.054998 0.193833 0.120255 894.53 938.47 1.000
alpha{3} 3.794467 2.273703 1.449325 7.042519 3.555222 1106.25 1232.97 1.000
pinvar{all} 0.485423 0.003415 0.363468 0.592030 0.491663 828.38 986.29 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -2250.594913
Model 2: PositiveSelection -2250.594913
Model 7: beta -2252.361068
Model 8: beta&w>1 -2250.517199
Model 2 vs 1 0
Model 8 vs 7 3.687738
-- Starting log on Wed Nov 09 22:46:08 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.06 sec, SCORE=1000, Nseq=12, Len=300
C1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLC
C2 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLC
C3 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C4 SSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C5 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTRLC
C6 SSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C7 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLC
C8 SSVWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C9 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C10 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C11 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPVGITTKFVKYTQLC
C12 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
*: ******************************:** ****:.****:**
C1 QYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C2 QYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C3 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C4 QYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLKRWLPDDAILVDNDMR
C5 QYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C6 QYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLRRWLPDDAILVDNDMR
C7 QYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C8 QYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLKRWLPDDAILVDNDMR
C9 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C10 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C11 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C12 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
*******:****************.*****:***:*************:*
C1 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C2 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C3 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C4 DYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C5 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C6 DYVSDADFSFTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENISKDGFFT
C7 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C8 DYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C9 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C10 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C11 DYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFT
C12 DYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFT
*********.*****.**********:*************** *******
C1 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C2 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C3 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C4 YINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSS
C5 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C6 YINGFINEKLALGGSVAIKITEFSWNKILYELIQRFEYWTVFCTSVNTSS
C7 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C8 YINGFINEKLALGGSVAIKITEFSWNKTLYELIQRFEYWTVFCTSVNTSS
C9 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C10 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C11 YINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C12 YINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
******:***:****.*********** **********************
C1 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C2 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C3 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C4 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C5 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C6 SEGFLIGINYLGLYCDKAVVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C7 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C8 SEGFLVGINYLGPYSDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C9 SEGFLIGINYLGPYCEKAIVDGNIMHANYIFWRNSTIMSLSHNSVLDTPK
C10 SEGFLIGINYLGPYCEKAIVDGNIMHANYIFWRNSTIMSLSHNSVLDTPK
C11 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C12 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
*****:****** *.:**:*******************:***********
C1 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C2 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C3 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHFVNTP
C4 FKCRCNNALVVNLKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP
C5 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C6 FKCRCNNALVVNLKERELNDMVVGLLRKGKILIRNNGKLLNFGNHFVNTP
C7 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C8 FKCRCNNALVVNLKERELNDMVVGLLRKGKILIRNNGKLLNFGNHFVNTP
C9 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C10 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C11 FKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
C12 FKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
*********:*****:***:**:*******:**************:**.*
-- Starting log on Wed Nov 09 22:47:13 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.10 sec, SCORE=1000, Nseq=12, Len=300
C1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLC
C2 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLC
C3 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C4 SSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C5 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTRLC
C6 SSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C7 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLC
C8 SSVWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C9 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C10 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C11 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPVGITTKFVKYTQLC
C12 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
*: ******************************:** ****:.****:**
C1 QYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C2 QYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C3 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C4 QYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLKRWLPDDAILVDNDMR
C5 QYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C6 QYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLRRWLPDDAILVDNDMR
C7 QYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C8 QYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLKRWLPDDAILVDNDMR
C9 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C10 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C11 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C12 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
*******:****************.*****:***:*************:*
C1 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C2 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C3 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C4 DYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C5 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C6 DYVSDADFSFTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENISKDGFFT
C7 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C8 DYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C9 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C10 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C11 DYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFT
C12 DYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFT
*********.*****.**********:*************** *******
C1 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C2 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C3 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C4 YINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSS
C5 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C6 YINGFINEKLALGGSVAIKITEFSWNKILYELIQRFEYWTVFCTSVNTSS
C7 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C8 YINGFINEKLALGGSVAIKITEFSWNKTLYELIQRFEYWTVFCTSVNTSS
C9 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C10 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C11 YINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C12 YINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
******:***:****.*********** **********************
C1 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C2 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C3 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C4 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C5 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C6 SEGFLIGINYLGLYCDKAVVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C7 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C8 SEGFLVGINYLGPYSDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C9 SEGFLIGINYLGPYCEKAIVDGNIMHANYIFWRNSTIMSLSHNSVLDTPK
C10 SEGFLIGINYLGPYCEKAIVDGNIMHANYIFWRNSTIMSLSHNSVLDTPK
C11 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C12 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
*****:****** *.:**:*******************:***********
C1 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C2 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C3 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHFVNTP
C4 FKCRCNNALVVNLKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP
C5 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C6 FKCRCNNALVVNLKERELNDMVVGLLRKGKILIRNNGKLLNFGNHFVNTP
C7 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C8 FKCRCNNALVVNLKERELNDMVVGLLRKGKILIRNNGKLLNFGNHFVNTP
C9 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C10 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C11 FKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
C12 FKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
*********:*****:***:**:*******:**************:**.*
-- Starting log on Thu Nov 10 02:58:56 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1.result/gapped_alignment/codeml,A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 12 taxa and 900 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C11
Taxon 4 -> C12
Taxon 5 -> C2
Taxon 6 -> C3
Taxon 7 -> C4
Taxon 8 -> C5
Taxon 9 -> C6
Taxon 10 -> C7
Taxon 11 -> C8
Taxon 12 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668049138
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1883392612
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 7131105723
Seed = 264503690
Swapseed = 1668049138
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 26 unique site patterns
Division 2 has 17 unique site patterns
Division 3 has 93 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -3613.325554 -- 41.620562
Chain 2 -- -3562.529681 -- 41.620562
Chain 3 -- -3765.788058 -- 41.620562
Chain 4 -- -3740.173142 -- 41.620562
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -3442.905108 -- 41.620562
Chain 2 -- -3746.026283 -- 41.620562
Chain 3 -- -3810.764887 -- 41.620562
Chain 4 -- -3534.334941 -- 41.620562
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-3613.326] (-3562.530) (-3765.788) (-3740.173) * [-3442.905] (-3746.026) (-3810.765) (-3534.335)
1000 -- (-2537.513) [-2489.279] (-2493.552) (-2501.016) * (-2519.210) (-2530.814) (-2497.676) [-2490.157] -- 0:00:00
2000 -- (-2435.915) (-2456.869) [-2433.006] (-2476.108) * [-2427.089] (-2442.108) (-2442.087) (-2447.566) -- 0:08:19
3000 -- (-2421.322) [-2409.620] (-2414.882) (-2452.963) * (-2390.019) [-2412.556] (-2421.619) (-2417.157) -- 0:05:32
4000 -- (-2391.618) (-2400.834) [-2380.400] (-2412.664) * [-2392.831] (-2411.004) (-2399.786) (-2408.474) -- 0:08:18
5000 -- (-2397.737) (-2385.248) (-2387.419) [-2379.447] * (-2391.979) [-2394.904] (-2404.232) (-2385.984) -- 0:09:57
Average standard deviation of split frequencies: 0.078567
6000 -- [-2391.192] (-2378.961) (-2381.711) (-2392.025) * [-2378.815] (-2387.225) (-2382.266) (-2375.835) -- 0:08:17
7000 -- [-2380.712] (-2385.161) (-2375.320) (-2379.919) * (-2385.005) [-2379.481] (-2384.772) (-2376.316) -- 0:09:27
8000 -- (-2382.276) [-2380.021] (-2380.758) (-2378.148) * (-2372.867) (-2393.155) (-2388.011) [-2373.115] -- 0:08:16
9000 -- (-2386.925) [-2380.046] (-2380.034) (-2384.529) * (-2394.752) (-2383.491) (-2390.769) [-2374.447] -- 0:09:10
10000 -- [-2374.741] (-2382.574) (-2387.952) (-2375.291) * [-2384.640] (-2378.651) (-2387.587) (-2379.411) -- 0:08:15
Average standard deviation of split frequencies: 0.067252
11000 -- [-2379.541] (-2372.420) (-2386.231) (-2384.231) * (-2385.961) (-2376.851) [-2376.497] (-2373.153) -- 0:08:59
12000 -- (-2380.056) [-2369.744] (-2385.912) (-2375.830) * [-2382.508] (-2382.134) (-2385.366) (-2379.719) -- 0:08:14
13000 -- (-2388.792) (-2379.354) (-2375.021) [-2372.593] * (-2390.576) (-2387.854) (-2388.937) [-2379.420] -- 0:08:51
14000 -- (-2379.763) (-2377.973) [-2383.043] (-2385.229) * (-2387.810) [-2381.277] (-2397.897) (-2378.806) -- 0:08:13
15000 -- (-2381.192) (-2388.310) (-2381.277) [-2381.292] * (-2375.273) (-2387.778) (-2384.190) [-2374.115] -- 0:08:45
Average standard deviation of split frequencies: 0.057586
16000 -- (-2383.002) (-2375.042) (-2380.294) [-2382.959] * (-2369.667) (-2376.040) (-2388.304) [-2386.961] -- 0:08:12
17000 -- (-2377.796) (-2380.903) (-2380.690) [-2376.941] * [-2379.170] (-2376.595) (-2387.340) (-2382.781) -- 0:08:40
18000 -- (-2393.544) [-2378.541] (-2377.896) (-2376.340) * (-2378.445) (-2381.883) [-2388.627] (-2378.915) -- 0:08:11
19000 -- (-2381.366) [-2367.630] (-2373.988) (-2378.066) * (-2378.375) [-2379.579] (-2381.500) (-2388.980) -- 0:08:36
20000 -- (-2382.541) (-2382.886) [-2386.208] (-2376.226) * (-2386.724) (-2373.715) (-2381.689) [-2375.606] -- 0:08:59
Average standard deviation of split frequencies: 0.046760
21000 -- [-2368.976] (-2391.088) (-2375.200) (-2389.230) * (-2385.854) [-2376.013] (-2380.255) (-2375.763) -- 0:08:32
22000 -- (-2381.284) (-2380.688) [-2379.108] (-2374.558) * (-2380.286) (-2382.922) [-2374.893] (-2377.945) -- 0:08:53
23000 -- (-2378.816) (-2385.768) (-2381.848) [-2378.495] * (-2380.198) [-2380.640] (-2377.937) (-2376.005) -- 0:08:29
24000 -- [-2381.297] (-2387.844) (-2381.288) (-2384.316) * (-2380.044) (-2379.205) [-2380.092] (-2384.522) -- 0:08:48
25000 -- (-2376.134) [-2373.569] (-2378.991) (-2385.524) * (-2383.354) [-2380.933] (-2382.304) (-2377.256) -- 0:08:26
Average standard deviation of split frequencies: 0.038852
26000 -- [-2372.763] (-2376.257) (-2387.472) (-2381.375) * (-2375.005) (-2381.714) (-2390.018) [-2380.276] -- 0:08:44
27000 -- (-2377.910) [-2377.837] (-2386.189) (-2377.635) * (-2377.938) (-2385.893) (-2386.168) [-2376.916] -- 0:08:24
28000 -- (-2392.186) (-2389.822) [-2376.933] (-2376.232) * (-2384.451) [-2375.201] (-2390.197) (-2377.376) -- 0:08:40
29000 -- [-2378.643] (-2385.338) (-2376.617) (-2386.636) * [-2391.532] (-2376.869) (-2381.333) (-2377.790) -- 0:08:22
30000 -- (-2380.166) (-2380.349) (-2375.214) [-2376.780] * (-2370.475) [-2384.763] (-2381.000) (-2379.058) -- 0:08:37
Average standard deviation of split frequencies: 0.045384
31000 -- [-2384.300] (-2382.333) (-2375.810) (-2377.934) * (-2384.655) [-2375.665] (-2387.092) (-2382.027) -- 0:08:20
32000 -- (-2379.586) (-2388.203) (-2384.267) [-2373.209] * (-2377.264) (-2377.100) (-2381.870) [-2377.471] -- 0:08:34
33000 -- (-2380.508) (-2379.879) [-2379.335] (-2383.599) * (-2387.031) [-2376.670] (-2384.839) (-2373.170) -- 0:08:18
34000 -- (-2379.216) [-2374.096] (-2373.924) (-2380.255) * (-2385.055) (-2389.419) [-2374.286] (-2385.023) -- 0:08:31
35000 -- (-2376.831) [-2373.517] (-2385.132) (-2382.420) * (-2377.215) (-2385.905) [-2374.401] (-2375.307) -- 0:08:43
Average standard deviation of split frequencies: 0.035542
36000 -- (-2374.627) (-2377.314) (-2377.088) [-2374.555] * (-2383.071) [-2371.657] (-2386.142) (-2380.095) -- 0:08:28
37000 -- [-2375.493] (-2379.353) (-2380.882) (-2386.698) * (-2376.902) (-2380.712) [-2388.270] (-2382.465) -- 0:08:40
38000 -- (-2383.002) (-2378.666) [-2382.777] (-2382.562) * (-2382.027) [-2372.720] (-2376.688) (-2380.503) -- 0:08:26
39000 -- (-2386.965) [-2373.957] (-2384.395) (-2380.582) * (-2377.876) (-2383.806) (-2382.537) [-2379.652] -- 0:08:37
40000 -- (-2387.583) [-2377.665] (-2378.518) (-2385.852) * (-2373.342) [-2375.490] (-2389.431) (-2378.707) -- 0:08:23
Average standard deviation of split frequencies: 0.035355
41000 -- (-2383.219) [-2374.325] (-2392.147) (-2381.058) * [-2366.177] (-2386.364) (-2390.916) (-2382.419) -- 0:08:34
42000 -- [-2376.754] (-2376.254) (-2383.690) (-2378.149) * (-2374.298) (-2379.576) [-2379.577] (-2384.125) -- 0:08:21
43000 -- (-2382.975) (-2381.866) [-2374.879] (-2373.765) * (-2387.183) (-2381.860) (-2381.717) [-2382.410] -- 0:08:31
44000 -- (-2375.091) (-2386.461) (-2377.297) [-2373.075] * (-2379.927) (-2379.735) (-2383.170) [-2375.221] -- 0:08:19
45000 -- (-2380.002) [-2377.059] (-2375.056) (-2379.325) * (-2381.924) (-2379.738) (-2375.827) [-2379.278] -- 0:08:29
Average standard deviation of split frequencies: 0.031210
46000 -- (-2373.708) [-2377.608] (-2393.276) (-2380.652) * (-2380.619) (-2376.790) (-2382.107) [-2375.151] -- 0:08:17
47000 -- (-2376.662) (-2391.061) (-2370.424) [-2372.937] * (-2373.813) (-2394.384) [-2381.181] (-2371.702) -- 0:08:26
48000 -- (-2383.241) (-2380.728) (-2380.237) [-2378.840] * (-2377.341) (-2386.699) [-2381.521] (-2376.452) -- 0:08:15
49000 -- (-2389.758) (-2380.168) [-2380.740] (-2373.682) * (-2377.446) (-2383.821) (-2378.631) [-2376.984] -- 0:08:24
50000 -- (-2379.083) (-2388.770) (-2380.507) [-2370.550] * (-2375.150) (-2377.805) (-2388.619) [-2376.604] -- 0:08:13
Average standard deviation of split frequencies: 0.035001
51000 -- (-2380.115) (-2381.957) (-2382.080) [-2372.108] * (-2387.788) (-2382.669) [-2378.256] (-2379.711) -- 0:08:22
52000 -- (-2385.902) (-2389.146) [-2371.714] (-2384.406) * (-2378.589) (-2376.069) (-2385.418) [-2371.737] -- 0:08:30
53000 -- (-2375.303) [-2388.490] (-2378.880) (-2384.384) * [-2374.313] (-2378.681) (-2386.177) (-2375.069) -- 0:08:20
54000 -- [-2382.642] (-2386.796) (-2373.121) (-2374.909) * [-2380.111] (-2380.831) (-2386.954) (-2383.349) -- 0:08:28
55000 -- [-2369.073] (-2389.383) (-2376.881) (-2389.671) * (-2370.609) (-2376.796) [-2386.856] (-2377.804) -- 0:08:18
Average standard deviation of split frequencies: 0.030465
56000 -- (-2383.106) (-2378.355) (-2377.853) [-2383.507] * (-2375.280) [-2389.791] (-2387.863) (-2379.295) -- 0:08:25
57000 -- (-2376.648) (-2391.201) [-2376.104] (-2384.347) * [-2374.271] (-2384.790) (-2390.513) (-2385.899) -- 0:08:16
58000 -- (-2384.043) (-2386.889) [-2379.299] (-2387.091) * (-2381.815) (-2392.555) (-2377.026) [-2385.967] -- 0:08:23
59000 -- [-2372.285] (-2379.261) (-2377.815) (-2377.910) * (-2392.322) [-2382.393] (-2379.815) (-2375.763) -- 0:08:14
60000 -- (-2386.147) [-2378.044] (-2374.228) (-2382.424) * (-2384.015) (-2383.946) [-2377.579] (-2380.152) -- 0:08:21
Average standard deviation of split frequencies: 0.031452
61000 -- (-2387.670) (-2376.142) [-2381.939] (-2382.102) * (-2378.051) [-2378.494] (-2380.152) (-2383.058) -- 0:08:12
62000 -- (-2378.106) [-2375.469] (-2383.040) (-2388.653) * (-2378.118) [-2372.488] (-2383.767) (-2380.448) -- 0:08:19
63000 -- [-2379.233] (-2378.453) (-2375.690) (-2383.808) * (-2387.471) (-2379.909) [-2378.469] (-2378.906) -- 0:08:10
64000 -- [-2375.027] (-2375.110) (-2376.314) (-2379.914) * (-2383.765) (-2372.151) (-2374.191) [-2376.199] -- 0:08:17
65000 -- (-2373.833) [-2384.747] (-2383.604) (-2378.218) * [-2383.263] (-2381.371) (-2386.733) (-2380.415) -- 0:08:09
Average standard deviation of split frequencies: 0.032992
66000 -- [-2374.723] (-2380.632) (-2375.688) (-2390.696) * (-2388.546) (-2381.111) (-2394.697) [-2383.118] -- 0:08:15
67000 -- (-2370.572) (-2380.445) [-2385.632] (-2392.008) * (-2383.953) (-2381.319) (-2385.182) [-2388.381] -- 0:08:07
68000 -- [-2370.466] (-2385.015) (-2382.983) (-2384.233) * (-2382.617) [-2379.696] (-2383.143) (-2376.637) -- 0:08:13
69000 -- (-2377.569) [-2383.906] (-2368.189) (-2380.194) * [-2383.957] (-2374.394) (-2391.422) (-2382.100) -- 0:08:19
70000 -- (-2379.024) (-2385.526) [-2383.996] (-2379.357) * (-2375.461) [-2374.984] (-2381.014) (-2381.109) -- 0:08:11
Average standard deviation of split frequencies: 0.033989
71000 -- (-2378.603) (-2396.603) (-2379.276) [-2375.908] * (-2374.909) (-2373.292) (-2378.909) [-2381.063] -- 0:08:17
72000 -- (-2379.654) (-2379.776) (-2382.685) [-2373.808] * [-2377.612] (-2395.837) (-2383.545) (-2381.839) -- 0:08:09
73000 -- (-2374.549) [-2386.799] (-2387.924) (-2385.647) * [-2378.504] (-2381.419) (-2386.116) (-2378.170) -- 0:08:15
74000 -- (-2387.147) (-2392.078) (-2375.200) [-2380.599] * (-2391.722) (-2381.273) (-2373.247) [-2377.582] -- 0:08:08
75000 -- (-2380.047) [-2381.373] (-2386.206) (-2384.751) * (-2380.975) (-2391.428) [-2380.592] (-2375.928) -- 0:08:13
Average standard deviation of split frequencies: 0.034262
76000 -- (-2377.895) [-2375.868] (-2383.771) (-2378.901) * (-2380.392) (-2380.834) [-2379.431] (-2373.194) -- 0:08:06
77000 -- (-2379.728) (-2386.010) [-2370.708] (-2382.198) * (-2379.266) [-2380.369] (-2375.976) (-2383.564) -- 0:08:11
78000 -- (-2387.005) (-2378.429) (-2383.767) [-2381.089] * (-2383.372) [-2373.071] (-2378.677) (-2384.783) -- 0:08:04
79000 -- [-2386.627] (-2379.694) (-2384.900) (-2379.378) * (-2376.585) [-2394.481] (-2380.313) (-2384.302) -- 0:08:09
80000 -- (-2380.083) (-2391.642) (-2385.183) [-2375.389] * (-2380.262) (-2379.206) [-2390.358] (-2381.971) -- 0:08:02
Average standard deviation of split frequencies: 0.030388
81000 -- (-2383.260) (-2392.695) [-2381.453] (-2381.833) * (-2378.483) [-2382.191] (-2393.491) (-2379.049) -- 0:08:07
82000 -- [-2378.175] (-2379.274) (-2378.515) (-2379.847) * (-2384.194) (-2379.825) [-2377.076] (-2377.448) -- 0:08:01
83000 -- [-2375.801] (-2380.439) (-2378.034) (-2372.357) * [-2371.855] (-2377.906) (-2386.095) (-2373.769) -- 0:08:06
84000 -- (-2379.618) (-2387.300) [-2384.398] (-2375.996) * (-2373.444) (-2393.371) (-2383.725) [-2383.061] -- 0:07:59
85000 -- [-2378.051] (-2383.676) (-2383.161) (-2378.565) * (-2379.216) (-2384.761) [-2385.171] (-2377.163) -- 0:08:04
Average standard deviation of split frequencies: 0.029600
86000 -- (-2393.620) (-2384.362) (-2378.406) [-2374.034] * [-2377.389] (-2378.844) (-2380.565) (-2384.221) -- 0:08:08
87000 -- (-2382.727) (-2372.064) [-2378.651] (-2380.250) * (-2376.348) (-2376.522) [-2373.566] (-2380.985) -- 0:08:02
88000 -- [-2379.521] (-2397.141) (-2384.916) (-2382.449) * (-2377.803) (-2376.347) (-2379.539) [-2373.419] -- 0:08:07
89000 -- (-2383.657) (-2377.345) (-2384.827) [-2377.111] * (-2383.769) (-2387.642) (-2388.089) [-2377.281] -- 0:08:01
90000 -- [-2382.998] (-2378.824) (-2376.099) (-2378.669) * [-2373.449] (-2390.391) (-2376.016) (-2392.287) -- 0:08:05
Average standard deviation of split frequencies: 0.027730
91000 -- (-2377.283) (-2373.096) [-2375.288] (-2370.281) * [-2377.478] (-2388.080) (-2378.008) (-2383.640) -- 0:07:59
92000 -- [-2371.708] (-2381.877) (-2371.605) (-2380.000) * (-2385.124) [-2380.379] (-2376.273) (-2384.378) -- 0:08:03
93000 -- [-2374.072] (-2381.300) (-2384.117) (-2390.101) * (-2381.406) [-2376.465] (-2380.865) (-2377.852) -- 0:07:57
94000 -- (-2388.801) [-2379.022] (-2377.239) (-2378.408) * (-2379.458) (-2377.876) [-2383.595] (-2387.672) -- 0:08:01
95000 -- (-2394.940) (-2376.338) (-2378.848) [-2379.707] * (-2383.752) (-2371.197) (-2375.025) [-2388.170] -- 0:07:56
Average standard deviation of split frequencies: 0.029217
96000 -- (-2374.185) (-2382.591) [-2377.444] (-2389.541) * (-2396.412) (-2380.684) (-2377.294) [-2379.635] -- 0:08:00
97000 -- (-2381.211) (-2379.773) (-2383.792) [-2367.760] * (-2381.496) (-2377.377) (-2377.513) [-2368.670] -- 0:07:54
98000 -- (-2380.452) (-2386.320) [-2374.840] (-2383.787) * (-2384.895) [-2374.126] (-2390.792) (-2369.937) -- 0:07:58
99000 -- [-2386.098] (-2385.060) (-2377.061) (-2381.959) * (-2388.990) [-2377.278] (-2380.256) (-2385.241) -- 0:07:53
100000 -- (-2371.459) (-2393.205) [-2378.733] (-2387.819) * (-2379.348) (-2381.054) [-2376.812] (-2380.658) -- 0:07:57
Average standard deviation of split frequencies: 0.029034
101000 -- (-2385.339) [-2380.000] (-2387.821) (-2376.358) * (-2380.008) (-2386.164) (-2378.292) [-2389.831] -- 0:07:51
102000 -- (-2389.448) [-2375.956] (-2387.383) (-2377.426) * (-2378.907) [-2379.059] (-2384.752) (-2373.640) -- 0:07:55
103000 -- (-2379.245) (-2384.190) (-2391.318) [-2376.040] * (-2381.727) [-2381.966] (-2380.110) (-2378.456) -- 0:07:50
104000 -- (-2386.312) [-2377.935] (-2374.608) (-2378.026) * (-2386.077) (-2379.246) [-2381.192] (-2381.154) -- 0:07:53
105000 -- (-2371.088) [-2375.534] (-2384.104) (-2377.541) * (-2377.906) (-2381.849) (-2376.940) [-2377.912] -- 0:07:57
Average standard deviation of split frequencies: 0.029129
106000 -- (-2380.008) (-2384.832) (-2388.599) [-2380.395] * (-2374.918) (-2394.429) (-2383.058) [-2369.825] -- 0:07:52
107000 -- (-2375.371) [-2377.125] (-2380.609) (-2379.629) * (-2378.467) (-2374.887) (-2376.688) [-2372.844] -- 0:07:55
108000 -- (-2378.488) [-2372.951] (-2379.027) (-2367.388) * (-2379.352) [-2387.441] (-2387.523) (-2379.676) -- 0:07:50
109000 -- (-2386.722) (-2381.815) [-2380.521] (-2382.528) * (-2378.898) (-2383.062) (-2380.587) [-2373.974] -- 0:07:54
110000 -- (-2388.203) (-2380.779) (-2384.976) [-2380.639] * (-2375.017) (-2385.132) (-2378.516) [-2377.216] -- 0:07:49
Average standard deviation of split frequencies: 0.032060
111000 -- (-2386.344) (-2374.774) [-2373.245] (-2381.897) * (-2374.671) [-2374.986] (-2375.054) (-2376.753) -- 0:07:52
112000 -- [-2375.504] (-2378.953) (-2389.591) (-2385.164) * [-2377.301] (-2388.663) (-2374.118) (-2379.281) -- 0:07:47
113000 -- (-2376.765) (-2385.716) [-2383.389] (-2376.391) * [-2380.349] (-2388.498) (-2378.926) (-2380.174) -- 0:07:50
114000 -- (-2387.411) (-2383.576) (-2378.227) [-2378.671] * (-2374.104) [-2377.054] (-2385.304) (-2376.467) -- 0:07:46
115000 -- (-2374.787) [-2379.834] (-2381.903) (-2378.901) * (-2376.716) (-2396.556) [-2372.914] (-2380.937) -- 0:07:49
Average standard deviation of split frequencies: 0.030372
116000 -- [-2376.721] (-2384.377) (-2380.740) (-2378.240) * (-2375.034) (-2387.972) (-2376.583) [-2381.063] -- 0:07:44
117000 -- (-2374.962) (-2377.152) [-2379.661] (-2393.995) * (-2383.499) (-2379.769) (-2393.268) [-2378.907] -- 0:07:47
118000 -- (-2387.159) (-2390.272) [-2383.572] (-2373.080) * (-2382.067) (-2381.256) [-2389.512] (-2377.378) -- 0:07:43
119000 -- (-2379.920) (-2376.221) [-2378.880] (-2371.481) * (-2379.272) (-2381.260) (-2378.825) [-2377.899] -- 0:07:46
120000 -- (-2384.489) (-2383.813) [-2372.424] (-2390.620) * (-2385.885) [-2376.557] (-2380.770) (-2374.383) -- 0:07:41
Average standard deviation of split frequencies: 0.031048
121000 -- [-2375.575] (-2381.423) (-2373.617) (-2385.158) * (-2373.389) [-2375.406] (-2379.745) (-2374.673) -- 0:07:44
122000 -- (-2377.909) [-2378.398] (-2387.198) (-2382.865) * (-2392.138) [-2378.385] (-2381.446) (-2402.522) -- 0:07:40
123000 -- [-2372.394] (-2391.612) (-2370.265) (-2376.314) * (-2382.319) (-2380.285) [-2380.514] (-2384.080) -- 0:07:43
124000 -- (-2387.425) (-2390.361) (-2379.060) [-2382.259] * (-2384.683) [-2379.184] (-2374.085) (-2386.830) -- 0:07:39
125000 -- (-2381.461) [-2381.190] (-2379.839) (-2381.197) * (-2382.306) (-2375.096) [-2376.577] (-2386.746) -- 0:07:42
Average standard deviation of split frequencies: 0.030324
126000 -- (-2377.383) (-2375.907) (-2385.252) [-2374.905] * (-2383.318) [-2374.058] (-2381.488) (-2391.447) -- 0:07:37
127000 -- (-2386.526) (-2380.644) (-2379.816) [-2377.534] * (-2385.095) [-2377.769] (-2379.247) (-2380.136) -- 0:07:40
128000 -- [-2378.002] (-2380.556) (-2377.659) (-2380.498) * [-2370.643] (-2383.432) (-2380.219) (-2375.016) -- 0:07:43
129000 -- (-2375.111) [-2373.902] (-2386.031) (-2381.243) * (-2390.412) (-2374.457) [-2375.003] (-2382.446) -- 0:07:39
130000 -- (-2389.939) [-2380.532] (-2380.852) (-2379.255) * (-2379.209) (-2379.918) [-2373.681] (-2394.940) -- 0:07:41
Average standard deviation of split frequencies: 0.027722
131000 -- (-2375.863) [-2380.004] (-2382.819) (-2372.230) * (-2383.037) [-2376.126] (-2383.897) (-2384.367) -- 0:07:37
132000 -- [-2380.657] (-2390.698) (-2377.397) (-2373.376) * (-2379.706) (-2378.937) [-2375.645] (-2381.264) -- 0:07:40
133000 -- [-2376.085] (-2389.260) (-2380.666) (-2381.131) * (-2377.603) (-2376.370) [-2371.986] (-2383.758) -- 0:07:36
134000 -- (-2375.735) (-2382.138) (-2380.573) [-2374.005] * [-2377.411] (-2388.252) (-2376.723) (-2382.327) -- 0:07:38
135000 -- (-2374.697) (-2381.112) (-2389.830) [-2376.239] * (-2378.721) (-2392.720) [-2386.170] (-2379.116) -- 0:07:34
Average standard deviation of split frequencies: 0.026170
136000 -- [-2381.885] (-2390.230) (-2385.306) (-2380.081) * (-2375.170) [-2384.008] (-2380.218) (-2378.874) -- 0:07:37
137000 -- [-2382.987] (-2380.096) (-2383.305) (-2385.448) * (-2377.225) [-2376.104] (-2376.364) (-2383.854) -- 0:07:33
138000 -- (-2379.794) [-2383.363] (-2381.059) (-2385.514) * (-2378.099) [-2380.964] (-2382.977) (-2377.209) -- 0:07:35
139000 -- (-2380.476) (-2383.035) [-2374.167] (-2388.547) * (-2372.168) (-2378.209) [-2381.046] (-2378.154) -- 0:07:32
140000 -- (-2394.234) [-2391.558] (-2381.458) (-2383.457) * (-2381.321) (-2380.304) (-2380.076) [-2382.748] -- 0:07:34
Average standard deviation of split frequencies: 0.025751
141000 -- (-2388.694) [-2374.573] (-2381.046) (-2385.241) * [-2376.492] (-2382.958) (-2373.406) (-2383.227) -- 0:07:30
142000 -- (-2382.731) (-2381.866) [-2374.355] (-2394.141) * [-2377.212] (-2382.190) (-2377.233) (-2379.735) -- 0:07:33
143000 -- (-2378.992) (-2386.049) (-2371.993) [-2378.281] * [-2373.903] (-2385.347) (-2381.576) (-2377.821) -- 0:07:29
144000 -- (-2386.031) (-2388.672) [-2373.183] (-2378.282) * (-2385.173) (-2385.993) (-2379.046) [-2380.054] -- 0:07:31
145000 -- (-2388.692) [-2372.193] (-2397.715) (-2385.377) * (-2386.280) (-2375.714) (-2375.429) [-2383.554] -- 0:07:34
Average standard deviation of split frequencies: 0.024301
146000 -- [-2377.333] (-2385.329) (-2383.068) (-2386.518) * (-2395.586) [-2376.158] (-2383.310) (-2384.127) -- 0:07:30
147000 -- (-2397.710) (-2374.360) (-2382.114) [-2379.183] * [-2376.594] (-2375.892) (-2384.309) (-2381.706) -- 0:07:32
148000 -- (-2381.868) (-2388.320) [-2373.495] (-2378.692) * (-2381.439) (-2383.371) [-2369.935] (-2382.279) -- 0:07:29
149000 -- [-2386.617] (-2377.287) (-2388.184) (-2394.524) * (-2385.136) [-2377.539] (-2381.982) (-2381.308) -- 0:07:31
150000 -- (-2375.727) (-2380.030) (-2378.274) [-2383.005] * (-2383.305) (-2382.405) [-2380.850] (-2385.861) -- 0:07:27
Average standard deviation of split frequencies: 0.025854
151000 -- (-2379.136) (-2374.142) (-2373.528) [-2377.755] * (-2378.032) (-2379.536) (-2375.307) [-2375.077] -- 0:07:29
152000 -- (-2381.035) (-2380.353) (-2387.955) [-2375.431] * [-2376.952] (-2372.463) (-2374.347) (-2379.808) -- 0:07:26
153000 -- (-2371.391) (-2382.376) [-2384.248] (-2379.693) * (-2381.000) [-2378.239] (-2374.053) (-2390.769) -- 0:07:28
154000 -- [-2372.991] (-2386.798) (-2373.613) (-2389.164) * [-2379.943] (-2380.570) (-2382.151) (-2385.270) -- 0:07:24
155000 -- [-2372.967] (-2384.308) (-2370.883) (-2377.033) * (-2387.449) (-2378.562) [-2378.997] (-2386.297) -- 0:07:27
Average standard deviation of split frequencies: 0.022107
156000 -- (-2377.815) (-2385.540) [-2372.287] (-2377.643) * (-2377.365) (-2375.632) (-2382.333) [-2382.277] -- 0:07:23
157000 -- [-2386.747] (-2377.618) (-2379.290) (-2393.265) * [-2381.711] (-2374.524) (-2385.638) (-2380.143) -- 0:07:25
158000 -- (-2383.858) [-2373.814] (-2382.691) (-2383.746) * (-2376.629) [-2380.905] (-2376.322) (-2383.989) -- 0:07:22
159000 -- (-2376.023) (-2375.328) [-2374.894] (-2381.474) * (-2375.841) (-2372.156) (-2374.884) [-2393.887] -- 0:07:24
160000 -- [-2372.043] (-2379.502) (-2384.414) (-2396.248) * [-2379.690] (-2373.413) (-2374.353) (-2386.645) -- 0:07:21
Average standard deviation of split frequencies: 0.022083
161000 -- (-2389.001) (-2376.595) [-2379.170] (-2386.577) * [-2382.098] (-2379.290) (-2376.548) (-2373.448) -- 0:07:22
162000 -- (-2379.691) [-2376.201] (-2378.897) (-2383.551) * (-2382.850) (-2385.553) [-2378.470] (-2381.632) -- 0:07:19
163000 -- (-2373.934) (-2382.852) (-2374.526) [-2380.169] * [-2377.289] (-2388.157) (-2373.623) (-2399.211) -- 0:07:21
164000 -- (-2374.587) [-2376.357] (-2380.143) (-2379.386) * (-2389.905) [-2382.028] (-2373.307) (-2382.165) -- 0:07:23
165000 -- (-2389.215) [-2377.781] (-2378.606) (-2375.387) * (-2385.694) (-2379.063) (-2381.952) [-2374.784] -- 0:07:20
Average standard deviation of split frequencies: 0.021523
166000 -- [-2375.088] (-2387.207) (-2372.738) (-2383.946) * [-2380.312] (-2385.051) (-2388.201) (-2383.705) -- 0:07:22
167000 -- (-2384.517) (-2378.076) [-2372.481] (-2389.275) * (-2381.246) (-2383.869) (-2377.223) [-2382.162] -- 0:07:18
168000 -- (-2379.914) (-2380.788) [-2376.202] (-2385.442) * (-2380.599) (-2385.031) (-2377.201) [-2378.800] -- 0:07:20
169000 -- (-2384.344) (-2380.139) (-2385.201) [-2382.805] * (-2384.635) (-2381.873) [-2376.660] (-2380.003) -- 0:07:17
170000 -- [-2375.457] (-2380.676) (-2373.071) (-2372.329) * [-2378.071] (-2376.312) (-2383.689) (-2372.608) -- 0:07:19
Average standard deviation of split frequencies: 0.021370
171000 -- [-2382.319] (-2381.536) (-2383.803) (-2381.362) * (-2392.270) (-2382.070) (-2390.465) [-2378.355] -- 0:07:16
172000 -- [-2378.288] (-2378.198) (-2383.687) (-2377.198) * (-2379.053) [-2385.612] (-2383.981) (-2376.578) -- 0:07:18
173000 -- (-2382.053) (-2382.974) [-2378.641] (-2368.133) * [-2386.233] (-2382.756) (-2383.441) (-2372.763) -- 0:07:15
174000 -- (-2387.366) (-2376.458) [-2377.823] (-2383.392) * (-2375.612) [-2382.569] (-2391.391) (-2373.664) -- 0:07:16
175000 -- (-2380.680) (-2383.763) [-2375.155] (-2388.126) * [-2375.912] (-2391.412) (-2386.943) (-2381.771) -- 0:07:13
Average standard deviation of split frequencies: 0.019172
176000 -- (-2380.653) [-2376.421] (-2374.108) (-2380.846) * [-2379.619] (-2389.573) (-2383.801) (-2378.903) -- 0:07:15
177000 -- (-2375.226) (-2378.580) (-2387.312) [-2376.095] * (-2391.539) (-2376.629) [-2379.706] (-2377.846) -- 0:07:12
178000 -- [-2372.924] (-2379.066) (-2375.029) (-2384.644) * (-2374.161) (-2393.115) [-2371.811] (-2376.878) -- 0:07:14
179000 -- [-2386.338] (-2377.615) (-2381.404) (-2376.004) * (-2376.865) (-2381.666) (-2379.552) [-2376.653] -- 0:07:11
180000 -- (-2386.015) (-2389.612) (-2387.261) [-2368.818] * (-2373.445) (-2378.410) (-2382.084) [-2375.239] -- 0:07:12
Average standard deviation of split frequencies: 0.019226
181000 -- (-2391.180) [-2372.574] (-2384.025) (-2378.593) * (-2381.183) (-2371.833) [-2380.098] (-2376.340) -- 0:07:14
182000 -- (-2393.746) (-2382.606) (-2383.392) [-2371.485] * (-2385.798) (-2386.466) [-2370.820] (-2381.476) -- 0:07:11
183000 -- (-2379.086) (-2382.220) (-2375.600) [-2375.625] * (-2384.248) [-2379.100] (-2380.317) (-2376.174) -- 0:07:13
184000 -- (-2375.119) (-2386.073) [-2378.511] (-2377.745) * [-2375.594] (-2372.188) (-2386.891) (-2384.094) -- 0:07:10
185000 -- (-2380.022) (-2386.564) [-2372.513] (-2381.295) * (-2383.493) (-2373.959) [-2376.300] (-2381.046) -- 0:07:11
Average standard deviation of split frequencies: 0.016941
186000 -- (-2387.001) [-2376.017] (-2382.715) (-2381.401) * (-2382.594) (-2378.833) (-2376.570) [-2378.429] -- 0:07:08
187000 -- (-2378.351) (-2377.917) (-2370.741) [-2378.335] * (-2392.038) [-2376.693] (-2382.226) (-2376.978) -- 0:07:10
188000 -- [-2378.182] (-2370.682) (-2375.227) (-2370.619) * (-2375.086) [-2377.466] (-2376.075) (-2382.557) -- 0:07:07
189000 -- (-2390.909) (-2387.492) (-2389.536) [-2372.093] * (-2385.172) (-2380.873) (-2393.107) [-2374.797] -- 0:07:09
190000 -- [-2377.981] (-2403.865) (-2377.463) (-2379.649) * (-2384.037) [-2381.235] (-2376.523) (-2380.102) -- 0:07:06
Average standard deviation of split frequencies: 0.015615
191000 -- (-2387.075) (-2386.411) (-2391.126) [-2375.283] * (-2387.994) (-2377.671) (-2388.098) [-2382.341] -- 0:07:07
192000 -- [-2380.704] (-2386.648) (-2374.278) (-2382.040) * (-2390.966) [-2374.840] (-2379.539) (-2376.646) -- 0:07:05
193000 -- (-2376.453) (-2378.620) (-2382.102) [-2386.056] * (-2388.703) [-2383.336] (-2375.961) (-2375.416) -- 0:07:06
194000 -- (-2388.451) (-2384.110) (-2384.542) [-2379.335] * (-2391.588) (-2385.663) [-2380.036] (-2379.845) -- 0:07:03
195000 -- (-2385.371) (-2388.274) (-2379.561) [-2382.015] * (-2383.856) [-2376.413] (-2387.568) (-2385.221) -- 0:07:05
Average standard deviation of split frequencies: 0.014431
196000 -- (-2383.754) [-2388.131] (-2375.200) (-2379.803) * (-2382.958) (-2381.194) (-2387.063) [-2388.770] -- 0:07:02
197000 -- [-2376.929] (-2390.084) (-2374.851) (-2380.522) * (-2376.806) [-2372.067] (-2372.804) (-2380.076) -- 0:07:03
198000 -- (-2378.567) (-2390.710) [-2374.733] (-2403.724) * (-2383.231) (-2382.457) (-2382.900) [-2372.451] -- 0:07:01
199000 -- [-2374.319] (-2378.122) (-2383.894) (-2379.445) * (-2380.123) [-2383.701] (-2390.405) (-2382.794) -- 0:07:02
200000 -- [-2380.104] (-2399.662) (-2380.878) (-2380.175) * (-2388.542) (-2373.355) [-2380.940] (-2381.360) -- 0:07:04
Average standard deviation of split frequencies: 0.012859
201000 -- (-2379.490) (-2385.816) [-2373.516] (-2377.214) * (-2386.277) (-2378.533) (-2376.659) [-2383.644] -- 0:07:01
202000 -- [-2380.966] (-2382.212) (-2384.616) (-2385.504) * (-2391.128) [-2370.186] (-2381.134) (-2383.576) -- 0:07:02
203000 -- (-2379.965) (-2381.752) [-2376.377] (-2375.105) * [-2379.343] (-2382.291) (-2380.270) (-2388.228) -- 0:07:00
204000 -- (-2399.510) (-2378.497) (-2388.833) [-2379.005] * (-2389.618) (-2387.401) [-2379.896] (-2380.442) -- 0:07:01
205000 -- (-2382.655) (-2376.559) [-2382.776] (-2381.784) * (-2383.310) (-2379.216) [-2379.017] (-2382.772) -- 0:06:58
Average standard deviation of split frequencies: 0.011683
206000 -- (-2376.328) [-2377.583] (-2384.834) (-2383.070) * [-2378.618] (-2373.659) (-2388.678) (-2384.304) -- 0:07:00
207000 -- (-2381.931) [-2376.234] (-2379.317) (-2387.023) * (-2385.285) (-2375.754) (-2379.063) [-2376.005] -- 0:06:57
208000 -- (-2386.363) [-2375.861] (-2375.525) (-2394.397) * (-2375.409) (-2375.841) [-2375.023] (-2377.495) -- 0:06:58
209000 -- (-2383.732) (-2378.378) [-2376.748] (-2382.479) * (-2386.819) (-2389.809) [-2368.485] (-2381.942) -- 0:06:56
210000 -- (-2382.437) (-2369.322) (-2377.163) [-2373.025] * (-2373.153) (-2381.870) (-2382.843) [-2383.495] -- 0:06:57
Average standard deviation of split frequencies: 0.012602
211000 -- [-2378.968] (-2377.621) (-2382.156) (-2383.529) * (-2373.760) (-2388.828) (-2386.193) [-2381.428] -- 0:06:55
212000 -- (-2384.105) (-2376.689) [-2382.922] (-2376.745) * (-2378.751) (-2384.175) [-2377.271] (-2377.358) -- 0:06:56
213000 -- (-2380.059) (-2380.042) [-2381.314] (-2378.867) * (-2385.089) [-2385.299] (-2375.802) (-2380.102) -- 0:06:53
214000 -- (-2381.800) (-2381.257) [-2382.034] (-2378.911) * (-2386.447) [-2382.701] (-2383.610) (-2381.107) -- 0:06:55
215000 -- (-2369.094) (-2390.020) (-2385.609) [-2381.499] * (-2380.938) (-2385.270) [-2375.900] (-2390.174) -- 0:06:52
Average standard deviation of split frequencies: 0.014358
216000 -- (-2387.871) (-2379.574) (-2389.808) [-2377.421] * (-2378.997) (-2387.767) [-2374.201] (-2383.390) -- 0:06:53
217000 -- (-2386.978) (-2379.459) [-2376.649] (-2380.256) * (-2389.020) [-2380.490] (-2375.869) (-2381.011) -- 0:06:54
218000 -- [-2375.450] (-2383.304) (-2386.080) (-2374.969) * (-2381.609) (-2379.670) [-2378.904] (-2379.174) -- 0:06:52
219000 -- (-2388.423) (-2382.792) (-2382.412) [-2376.189] * (-2381.687) (-2374.879) [-2370.929] (-2386.046) -- 0:06:53
220000 -- (-2395.478) (-2378.728) (-2383.288) [-2379.830] * [-2386.083] (-2395.420) (-2383.134) (-2379.662) -- 0:06:51
Average standard deviation of split frequencies: 0.013380
221000 -- (-2390.566) (-2375.099) [-2377.610] (-2380.237) * (-2381.890) (-2384.457) (-2380.525) [-2382.092] -- 0:06:52
222000 -- (-2396.675) (-2388.753) [-2376.828] (-2393.881) * (-2389.143) (-2377.722) (-2386.784) [-2377.453] -- 0:06:50
223000 -- (-2375.005) [-2384.701] (-2382.931) (-2389.418) * (-2380.415) (-2375.996) [-2376.704] (-2375.361) -- 0:06:51
224000 -- (-2385.975) [-2374.945] (-2386.200) (-2391.016) * (-2385.486) (-2380.460) (-2383.322) [-2373.381] -- 0:06:48
225000 -- [-2374.006] (-2382.203) (-2378.018) (-2379.775) * [-2373.528] (-2383.602) (-2387.576) (-2383.072) -- 0:06:49
Average standard deviation of split frequencies: 0.012845
226000 -- (-2383.761) (-2373.768) [-2376.081] (-2379.256) * (-2376.720) (-2378.324) (-2381.816) [-2375.249] -- 0:06:47
227000 -- (-2378.269) (-2380.832) (-2378.521) [-2373.576] * (-2382.348) (-2384.891) (-2386.291) [-2378.578] -- 0:06:48
228000 -- (-2375.711) (-2381.175) [-2382.517] (-2384.696) * (-2383.575) [-2392.823] (-2378.443) (-2387.076) -- 0:06:46
229000 -- (-2384.916) (-2377.217) [-2374.059] (-2381.014) * (-2381.926) (-2384.921) (-2387.205) [-2375.588] -- 0:06:47
230000 -- (-2388.611) (-2389.251) [-2369.276] (-2377.821) * (-2374.973) (-2383.817) [-2377.221] (-2378.961) -- 0:06:45
Average standard deviation of split frequencies: 0.011509
231000 -- (-2380.103) [-2375.961] (-2375.032) (-2373.023) * [-2373.672] (-2381.411) (-2382.799) (-2384.244) -- 0:06:46
232000 -- (-2383.695) (-2377.006) [-2375.968] (-2378.499) * (-2378.652) (-2373.785) (-2381.992) [-2369.550] -- 0:06:43
233000 -- (-2376.270) (-2391.998) [-2373.923] (-2381.974) * (-2381.255) (-2382.582) (-2376.959) [-2376.650] -- 0:06:44
234000 -- [-2368.988] (-2381.024) (-2381.750) (-2375.047) * (-2382.093) (-2383.124) (-2380.778) [-2378.341] -- 0:06:45
235000 -- (-2376.980) [-2381.894] (-2380.377) (-2380.992) * (-2378.087) (-2388.593) [-2368.882] (-2373.244) -- 0:06:43
Average standard deviation of split frequencies: 0.012090
236000 -- [-2378.889] (-2381.292) (-2378.892) (-2384.730) * (-2378.799) (-2376.288) [-2378.333] (-2383.863) -- 0:06:44
237000 -- (-2377.249) (-2383.830) (-2377.407) [-2381.617] * (-2374.631) (-2379.180) (-2376.606) [-2387.325] -- 0:06:42
238000 -- [-2376.221] (-2371.721) (-2381.462) (-2379.615) * (-2385.039) (-2374.297) [-2373.456] (-2388.517) -- 0:06:43
239000 -- (-2379.376) [-2381.284] (-2384.837) (-2375.514) * (-2378.100) [-2377.765] (-2379.950) (-2380.094) -- 0:06:41
240000 -- [-2377.363] (-2389.649) (-2375.026) (-2384.142) * (-2383.426) [-2377.009] (-2377.434) (-2382.340) -- 0:06:42
Average standard deviation of split frequencies: 0.011443
241000 -- (-2380.543) [-2379.193] (-2382.991) (-2389.493) * (-2375.300) (-2386.528) (-2394.184) [-2380.698] -- 0:06:39
242000 -- (-2386.124) (-2375.889) (-2390.370) [-2373.205] * [-2381.453] (-2377.391) (-2376.562) (-2382.586) -- 0:06:40
243000 -- (-2386.813) [-2382.779] (-2383.136) (-2380.629) * (-2388.497) (-2391.821) [-2388.318] (-2378.471) -- 0:06:38
244000 -- [-2381.712] (-2391.137) (-2375.059) (-2375.252) * [-2372.584] (-2388.543) (-2377.237) (-2377.244) -- 0:06:39
245000 -- (-2384.878) [-2377.857] (-2383.436) (-2380.571) * (-2380.260) [-2389.521] (-2384.979) (-2378.782) -- 0:06:37
Average standard deviation of split frequencies: 0.012204
246000 -- (-2394.986) [-2380.916] (-2381.016) (-2380.576) * (-2380.872) [-2369.243] (-2377.922) (-2381.202) -- 0:06:38
247000 -- (-2384.084) [-2383.315] (-2384.741) (-2383.022) * (-2383.470) (-2373.909) [-2373.843] (-2377.492) -- 0:06:36
248000 -- (-2385.663) (-2380.063) (-2382.551) [-2371.907] * (-2383.493) (-2372.174) (-2388.584) [-2375.142] -- 0:06:37
249000 -- (-2392.451) (-2387.795) (-2376.231) [-2372.735] * (-2380.060) (-2382.946) [-2377.420] (-2370.125) -- 0:06:35
250000 -- (-2374.765) (-2374.474) (-2377.288) [-2373.115] * (-2371.577) [-2377.008] (-2390.055) (-2378.125) -- 0:06:36
Average standard deviation of split frequencies: 0.012174
251000 -- (-2381.172) (-2380.891) (-2387.460) [-2376.473] * (-2380.088) (-2375.129) [-2382.261] (-2376.135) -- 0:06:36
252000 -- (-2383.051) [-2379.381] (-2388.584) (-2391.392) * (-2377.412) [-2371.748] (-2381.266) (-2387.358) -- 0:06:34
253000 -- (-2375.815) (-2375.498) [-2371.901] (-2390.213) * (-2379.044) (-2369.630) (-2384.260) [-2375.813] -- 0:06:35
254000 -- (-2384.987) (-2383.958) (-2380.476) [-2385.057] * [-2376.601] (-2374.603) (-2385.362) (-2376.509) -- 0:06:33
255000 -- (-2382.241) [-2382.729] (-2381.059) (-2379.179) * (-2371.757) (-2382.137) [-2377.850] (-2384.756) -- 0:06:34
Average standard deviation of split frequencies: 0.011824
256000 -- (-2380.631) (-2377.392) (-2376.162) [-2383.357] * (-2387.186) (-2386.303) (-2386.244) [-2377.328] -- 0:06:32
257000 -- [-2386.404] (-2375.923) (-2380.125) (-2391.318) * [-2376.674] (-2376.608) (-2390.431) (-2376.207) -- 0:06:33
258000 -- (-2384.207) [-2372.955] (-2383.951) (-2384.723) * (-2387.256) [-2390.925] (-2391.901) (-2381.234) -- 0:06:31
259000 -- (-2379.391) [-2383.636] (-2401.176) (-2379.905) * (-2383.321) (-2371.789) (-2382.300) [-2383.822] -- 0:06:31
260000 -- [-2378.716] (-2376.890) (-2384.179) (-2383.911) * (-2375.287) [-2380.678] (-2380.697) (-2382.453) -- 0:06:29
Average standard deviation of split frequencies: 0.013611
261000 -- (-2377.878) (-2382.470) [-2374.410] (-2377.391) * (-2376.536) (-2387.358) [-2374.434] (-2370.701) -- 0:06:30
262000 -- (-2374.036) (-2385.502) [-2373.156] (-2389.311) * (-2383.945) [-2380.222] (-2378.676) (-2379.512) -- 0:06:28
263000 -- (-2386.128) (-2376.498) (-2376.965) [-2376.082] * (-2378.561) [-2387.673] (-2376.400) (-2383.802) -- 0:06:29
264000 -- (-2385.667) [-2389.255] (-2381.901) (-2388.982) * (-2378.987) [-2385.993] (-2375.861) (-2385.783) -- 0:06:27
265000 -- (-2381.566) (-2389.367) [-2376.453] (-2372.991) * (-2375.475) (-2379.827) (-2380.753) [-2381.695] -- 0:06:28
Average standard deviation of split frequencies: 0.013525
266000 -- (-2379.501) (-2373.316) [-2384.329] (-2378.405) * (-2382.273) (-2387.180) (-2389.188) [-2378.454] -- 0:06:29
267000 -- (-2389.060) (-2374.602) (-2382.974) [-2378.485] * (-2372.200) (-2372.953) (-2390.220) [-2370.164] -- 0:06:27
268000 -- [-2380.365] (-2378.838) (-2381.911) (-2374.084) * [-2382.924] (-2383.311) (-2376.191) (-2379.602) -- 0:06:27
269000 -- (-2381.173) (-2378.291) (-2384.322) [-2372.147] * [-2375.803] (-2374.299) (-2378.698) (-2376.289) -- 0:06:25
270000 -- [-2383.957] (-2375.016) (-2386.443) (-2379.371) * (-2379.408) (-2379.487) (-2380.000) [-2378.730] -- 0:06:26
Average standard deviation of split frequencies: 0.014758
271000 -- (-2373.924) (-2379.489) [-2374.477] (-2383.417) * [-2379.311] (-2378.991) (-2383.477) (-2377.523) -- 0:06:24
272000 -- (-2377.785) [-2394.378] (-2380.770) (-2375.027) * [-2381.721] (-2382.513) (-2382.635) (-2382.434) -- 0:06:25
273000 -- (-2381.209) (-2390.949) (-2373.069) [-2375.273] * [-2377.943] (-2389.053) (-2381.128) (-2377.160) -- 0:06:23
274000 -- (-2375.720) (-2382.454) (-2379.944) [-2370.842] * (-2384.833) (-2392.277) [-2377.705] (-2377.704) -- 0:06:24
275000 -- (-2374.079) [-2381.624] (-2381.566) (-2388.631) * (-2381.269) [-2378.660] (-2373.528) (-2373.781) -- 0:06:22
Average standard deviation of split frequencies: 0.015012
276000 -- (-2387.114) (-2381.418) [-2373.312] (-2384.372) * (-2378.674) [-2384.896] (-2377.867) (-2382.510) -- 0:06:22
277000 -- (-2374.357) [-2371.054] (-2380.855) (-2391.988) * (-2391.229) (-2382.461) [-2381.481] (-2388.546) -- 0:06:21
278000 -- [-2376.714] (-2388.707) (-2384.935) (-2381.841) * (-2378.791) (-2383.201) [-2382.687] (-2380.372) -- 0:06:21
279000 -- (-2377.296) (-2389.700) [-2374.508] (-2391.071) * (-2383.982) (-2383.055) (-2384.327) [-2377.515] -- 0:06:19
280000 -- (-2374.121) [-2374.625] (-2376.793) (-2393.846) * (-2382.691) [-2380.844] (-2382.086) (-2379.760) -- 0:06:20
Average standard deviation of split frequencies: 0.014939
281000 -- (-2384.911) [-2392.060] (-2379.093) (-2373.162) * [-2375.037] (-2380.001) (-2376.520) (-2387.945) -- 0:06:18
282000 -- (-2390.602) (-2379.014) [-2379.258] (-2374.924) * (-2383.388) (-2382.850) [-2372.906] (-2384.841) -- 0:06:19
283000 -- (-2384.905) (-2372.768) (-2381.683) [-2374.641] * (-2375.524) [-2371.351] (-2374.951) (-2378.732) -- 0:06:20
284000 -- (-2388.235) (-2377.186) (-2382.515) [-2380.376] * (-2380.170) (-2379.464) [-2377.899] (-2386.539) -- 0:06:18
285000 -- (-2380.152) (-2378.799) (-2382.080) [-2371.703] * [-2375.886] (-2378.373) (-2385.350) (-2391.309) -- 0:06:18
Average standard deviation of split frequencies: 0.013967
286000 -- (-2384.736) (-2371.662) (-2377.468) [-2381.088] * (-2379.021) (-2382.975) [-2377.452] (-2379.330) -- 0:06:16
287000 -- (-2388.158) [-2379.004] (-2370.026) (-2385.408) * (-2375.626) (-2380.145) [-2379.691] (-2383.407) -- 0:06:17
288000 -- (-2392.298) [-2369.513] (-2388.134) (-2383.667) * (-2385.617) (-2384.459) [-2371.728] (-2381.727) -- 0:06:15
289000 -- (-2377.956) (-2378.029) [-2379.078] (-2389.152) * [-2377.945] (-2392.888) (-2373.285) (-2374.421) -- 0:06:16
290000 -- (-2382.583) [-2376.953] (-2381.284) (-2380.287) * [-2381.292] (-2385.376) (-2376.168) (-2377.215) -- 0:06:14
Average standard deviation of split frequencies: 0.013316
291000 -- [-2381.720] (-2389.069) (-2373.098) (-2381.236) * (-2379.741) (-2382.336) [-2378.021] (-2373.101) -- 0:06:15
292000 -- (-2384.483) (-2376.871) (-2377.799) [-2376.483] * (-2385.799) (-2386.436) [-2377.574] (-2375.895) -- 0:06:13
293000 -- [-2376.379] (-2391.893) (-2391.392) (-2375.154) * (-2383.159) (-2384.646) [-2370.855] (-2386.265) -- 0:06:14
294000 -- (-2371.835) (-2384.128) (-2378.920) [-2373.034] * (-2384.673) (-2379.303) [-2379.126] (-2383.339) -- 0:06:12
295000 -- (-2389.512) (-2384.627) [-2378.892] (-2380.650) * (-2379.789) (-2384.298) [-2375.088] (-2378.226) -- 0:06:12
Average standard deviation of split frequencies: 0.013747
296000 -- [-2377.245] (-2374.580) (-2375.339) (-2394.530) * (-2378.700) (-2373.441) (-2374.804) [-2380.818] -- 0:06:11
297000 -- (-2376.346) (-2384.272) (-2379.824) [-2374.699] * (-2391.985) [-2369.949] (-2383.847) (-2373.922) -- 0:06:11
298000 -- (-2376.355) (-2382.483) [-2393.386] (-2384.431) * (-2391.901) [-2368.051] (-2378.756) (-2381.617) -- 0:06:09
299000 -- (-2384.194) (-2374.171) [-2383.262] (-2375.412) * (-2387.136) [-2388.302] (-2386.445) (-2377.123) -- 0:06:10
300000 -- (-2382.120) (-2378.120) (-2381.343) [-2376.102] * [-2376.270] (-2385.389) (-2388.808) (-2375.970) -- 0:06:11
Average standard deviation of split frequencies: 0.014276
301000 -- (-2379.949) (-2383.337) [-2384.434] (-2370.451) * (-2379.745) [-2376.280] (-2384.896) (-2386.361) -- 0:06:09
302000 -- (-2380.676) (-2379.845) [-2381.033] (-2382.770) * (-2388.965) (-2375.119) [-2374.553] (-2381.371) -- 0:06:09
303000 -- (-2383.286) (-2382.071) (-2376.858) [-2375.827] * (-2373.471) (-2376.684) [-2375.685] (-2388.044) -- 0:06:08
304000 -- [-2378.130] (-2375.979) (-2388.511) (-2396.727) * (-2380.817) (-2381.896) [-2373.589] (-2384.850) -- 0:06:08
305000 -- (-2375.083) (-2384.878) (-2375.752) [-2371.213] * (-2373.892) (-2377.060) (-2379.766) [-2378.473] -- 0:06:06
Average standard deviation of split frequencies: 0.014351
306000 -- [-2376.932] (-2377.373) (-2377.106) (-2374.442) * [-2375.317] (-2389.646) (-2378.723) (-2397.139) -- 0:06:07
307000 -- (-2376.073) (-2382.467) [-2374.823] (-2395.831) * (-2387.168) (-2379.669) [-2377.762] (-2369.589) -- 0:06:05
308000 -- (-2373.488) [-2380.519] (-2382.450) (-2383.961) * [-2378.632] (-2371.887) (-2390.280) (-2396.428) -- 0:06:06
309000 -- (-2387.359) (-2378.721) (-2377.779) [-2378.931] * [-2389.332] (-2380.517) (-2390.484) (-2394.326) -- 0:06:04
310000 -- (-2384.845) (-2381.009) (-2399.719) [-2384.781] * (-2386.253) [-2376.898] (-2376.859) (-2386.972) -- 0:06:05
Average standard deviation of split frequencies: 0.012698
311000 -- (-2378.201) (-2374.504) [-2382.623] (-2375.778) * (-2395.854) [-2373.846] (-2385.500) (-2373.842) -- 0:06:03
312000 -- [-2381.839] (-2377.116) (-2387.390) (-2383.561) * (-2370.191) (-2377.545) [-2379.380] (-2376.765) -- 0:06:03
313000 -- [-2372.347] (-2377.388) (-2379.830) (-2391.289) * (-2387.789) [-2377.177] (-2376.122) (-2375.818) -- 0:06:04
314000 -- (-2383.383) (-2382.834) [-2376.521] (-2379.841) * (-2391.959) [-2377.654] (-2371.732) (-2388.380) -- 0:06:02
315000 -- [-2375.469] (-2381.153) (-2386.379) (-2381.991) * (-2392.105) (-2381.296) (-2373.044) [-2379.414] -- 0:06:03
Average standard deviation of split frequencies: 0.012484
316000 -- (-2383.461) (-2381.240) [-2375.934] (-2383.060) * (-2390.966) [-2377.457] (-2377.675) (-2368.882) -- 0:06:01
317000 -- [-2381.283] (-2392.036) (-2368.630) (-2381.508) * (-2382.024) [-2371.519] (-2382.541) (-2377.469) -- 0:06:01
318000 -- [-2377.558] (-2381.537) (-2385.687) (-2385.114) * [-2375.966] (-2375.605) (-2387.754) (-2382.131) -- 0:06:00
319000 -- (-2375.704) (-2387.975) (-2379.663) [-2381.797] * (-2377.929) (-2381.559) (-2373.436) [-2382.823] -- 0:06:00
320000 -- (-2378.061) (-2382.957) [-2381.345] (-2402.707) * (-2378.651) (-2385.545) [-2385.379] (-2371.609) -- 0:05:59
Average standard deviation of split frequencies: 0.012380
321000 -- [-2374.616] (-2384.110) (-2373.805) (-2386.498) * [-2373.172] (-2386.666) (-2380.493) (-2378.669) -- 0:05:59
322000 -- (-2383.342) (-2389.313) [-2375.828] (-2379.573) * [-2369.857] (-2376.532) (-2386.596) (-2380.772) -- 0:05:57
323000 -- (-2378.589) (-2385.380) (-2374.089) [-2377.819] * [-2382.262] (-2378.877) (-2390.590) (-2379.975) -- 0:05:58
324000 -- (-2388.571) (-2388.147) [-2372.722] (-2376.213) * [-2384.464] (-2382.361) (-2382.661) (-2384.376) -- 0:05:56
325000 -- (-2398.379) (-2379.340) [-2382.489] (-2369.989) * (-2382.785) [-2382.158] (-2369.477) (-2387.093) -- 0:05:57
Average standard deviation of split frequencies: 0.012862
326000 -- (-2386.804) (-2373.854) [-2375.085] (-2377.211) * (-2379.610) (-2372.183) [-2380.760] (-2381.852) -- 0:05:55
327000 -- (-2391.093) (-2376.591) [-2375.297] (-2375.516) * [-2380.821] (-2382.448) (-2385.409) (-2386.278) -- 0:05:56
328000 -- (-2382.576) (-2383.945) (-2379.146) [-2380.936] * (-2393.943) [-2375.032] (-2390.041) (-2380.720) -- 0:05:56
329000 -- (-2379.196) (-2369.803) (-2378.031) [-2377.806] * (-2374.744) (-2381.119) [-2379.006] (-2378.276) -- 0:05:54
330000 -- (-2377.322) [-2375.237] (-2380.898) (-2387.604) * (-2378.483) (-2386.203) [-2379.818] (-2374.313) -- 0:05:55
Average standard deviation of split frequencies: 0.012831
331000 -- (-2378.940) (-2378.626) [-2370.060] (-2389.804) * (-2379.638) [-2386.198] (-2378.246) (-2386.189) -- 0:05:53
332000 -- (-2383.440) (-2380.819) (-2373.521) [-2373.446] * (-2380.238) (-2388.380) [-2372.466] (-2385.752) -- 0:05:54
333000 -- [-2374.511] (-2378.906) (-2373.990) (-2381.159) * (-2389.694) (-2391.621) [-2378.145] (-2381.274) -- 0:05:52
334000 -- (-2381.635) (-2383.168) (-2383.981) [-2388.144] * (-2376.978) (-2384.185) [-2382.948] (-2379.311) -- 0:05:52
335000 -- (-2380.556) (-2384.611) [-2378.544] (-2383.766) * (-2378.480) (-2381.343) (-2380.182) [-2373.608] -- 0:05:51
Average standard deviation of split frequencies: 0.013070
336000 -- (-2384.196) (-2379.627) (-2373.074) [-2376.192] * [-2380.777] (-2389.812) (-2392.971) (-2385.903) -- 0:05:51
337000 -- (-2378.220) [-2380.256] (-2382.735) (-2377.362) * (-2392.530) [-2375.411] (-2382.968) (-2377.623) -- 0:05:50
338000 -- (-2383.592) [-2381.859] (-2381.192) (-2385.103) * (-2392.054) [-2374.012] (-2375.880) (-2375.175) -- 0:05:50
339000 -- (-2385.372) (-2396.617) [-2376.762] (-2386.226) * (-2386.750) (-2378.513) (-2372.563) [-2375.203] -- 0:05:49
340000 -- (-2384.457) [-2377.541] (-2388.841) (-2384.105) * [-2381.966] (-2385.518) (-2382.364) (-2390.409) -- 0:05:49
Average standard deviation of split frequencies: 0.013182
341000 -- (-2380.058) (-2380.780) (-2390.889) [-2375.622] * [-2378.474] (-2384.408) (-2375.372) (-2382.802) -- 0:05:47
342000 -- (-2382.940) (-2381.154) (-2386.741) [-2376.665] * (-2379.814) (-2381.846) [-2377.720] (-2388.944) -- 0:05:48
343000 -- (-2387.739) [-2373.996] (-2393.706) (-2385.569) * (-2387.312) (-2378.261) (-2384.219) [-2377.159] -- 0:05:46
344000 -- (-2376.640) (-2376.631) [-2382.604] (-2388.784) * (-2382.429) (-2384.176) [-2373.769] (-2381.887) -- 0:05:47
345000 -- [-2371.889] (-2382.414) (-2374.863) (-2374.793) * [-2378.811] (-2374.180) (-2385.222) (-2378.062) -- 0:05:47
Average standard deviation of split frequencies: 0.013911
346000 -- (-2385.103) (-2391.731) [-2376.035] (-2382.634) * (-2383.446) (-2373.777) (-2386.411) [-2376.310] -- 0:05:45
347000 -- (-2388.879) [-2372.836] (-2377.532) (-2376.551) * (-2374.854) (-2381.576) [-2381.285] (-2385.765) -- 0:05:46
348000 -- [-2383.173] (-2372.601) (-2373.052) (-2379.967) * (-2383.232) (-2390.386) [-2380.771] (-2378.512) -- 0:05:44
349000 -- [-2385.999] (-2377.933) (-2383.548) (-2380.930) * [-2372.998] (-2399.508) (-2382.680) (-2391.814) -- 0:05:45
350000 -- (-2380.688) (-2377.468) [-2379.124] (-2386.099) * (-2392.567) (-2387.557) (-2384.852) [-2373.368] -- 0:05:43
Average standard deviation of split frequencies: 0.014434
351000 -- (-2380.691) (-2377.406) [-2391.183] (-2375.030) * (-2385.425) [-2387.291] (-2387.535) (-2381.746) -- 0:05:43
352000 -- (-2380.733) (-2385.512) (-2386.485) [-2379.023] * (-2382.703) [-2371.898] (-2383.714) (-2375.091) -- 0:05:42
353000 -- (-2374.204) (-2386.493) [-2376.944] (-2382.478) * (-2382.272) (-2386.617) (-2382.740) [-2381.630] -- 0:05:42
354000 -- (-2378.851) (-2386.341) [-2372.338] (-2384.543) * [-2373.892] (-2375.865) (-2378.304) (-2393.550) -- 0:05:41
355000 -- (-2385.639) (-2384.917) (-2384.661) [-2371.709] * (-2378.754) [-2376.764] (-2381.687) (-2378.644) -- 0:05:41
Average standard deviation of split frequencies: 0.014636
356000 -- [-2372.642] (-2383.875) (-2394.148) (-2379.431) * (-2384.214) [-2376.265] (-2372.701) (-2376.808) -- 0:05:40
357000 -- [-2385.804] (-2380.658) (-2381.827) (-2382.131) * (-2375.859) (-2378.551) (-2387.712) [-2379.070] -- 0:05:40
358000 -- (-2378.628) (-2382.447) [-2384.999] (-2381.180) * (-2381.656) [-2378.969] (-2373.635) (-2388.160) -- 0:05:38
359000 -- (-2377.456) [-2375.968] (-2377.210) (-2376.944) * (-2392.796) (-2384.179) [-2377.449] (-2381.971) -- 0:05:39
360000 -- (-2383.809) (-2380.213) (-2375.818) [-2379.233] * [-2374.100] (-2395.289) (-2380.912) (-2378.691) -- 0:05:37
Average standard deviation of split frequencies: 0.014584
361000 -- (-2378.519) [-2381.468] (-2378.431) (-2382.424) * [-2376.955] (-2375.489) (-2382.886) (-2371.161) -- 0:05:38
362000 -- (-2386.111) (-2378.235) (-2381.299) [-2378.985] * (-2380.603) (-2378.093) [-2373.676] (-2371.339) -- 0:05:36
363000 -- (-2383.017) (-2381.488) [-2376.592] (-2379.186) * (-2377.863) (-2376.761) (-2376.895) [-2377.317] -- 0:05:36
364000 -- [-2384.476] (-2374.635) (-2389.847) (-2377.198) * (-2380.758) (-2384.406) [-2381.756] (-2381.543) -- 0:05:37
365000 -- (-2381.110) [-2380.150] (-2385.703) (-2378.818) * (-2377.632) [-2375.113] (-2377.588) (-2381.188) -- 0:05:35
Average standard deviation of split frequencies: 0.013761
366000 -- (-2376.138) (-2376.274) [-2382.322] (-2385.281) * (-2378.119) (-2378.906) (-2378.850) [-2372.425] -- 0:05:36
367000 -- (-2386.284) [-2380.057] (-2382.753) (-2378.167) * (-2372.806) (-2383.004) [-2373.820] (-2369.793) -- 0:05:34
368000 -- [-2369.479] (-2376.399) (-2382.891) (-2377.258) * (-2388.395) (-2379.459) (-2380.203) [-2374.257] -- 0:05:34
369000 -- (-2381.207) (-2391.973) [-2376.448] (-2372.680) * [-2376.523] (-2386.403) (-2377.840) (-2379.875) -- 0:05:33
370000 -- (-2380.764) (-2377.941) [-2374.671] (-2385.492) * [-2375.587] (-2389.888) (-2381.775) (-2375.245) -- 0:05:33
Average standard deviation of split frequencies: 0.013186
371000 -- (-2369.982) (-2388.479) (-2375.767) [-2379.516] * (-2385.442) (-2379.961) [-2385.754] (-2388.793) -- 0:05:32
372000 -- (-2382.090) (-2379.590) [-2380.344] (-2386.088) * (-2383.940) [-2388.459] (-2389.024) (-2375.212) -- 0:05:32
373000 -- (-2381.088) (-2375.495) (-2377.063) [-2374.580] * [-2374.010] (-2377.831) (-2371.374) (-2376.281) -- 0:05:31
374000 -- [-2374.493] (-2388.053) (-2383.262) (-2381.932) * [-2381.407] (-2373.970) (-2387.042) (-2394.519) -- 0:05:31
375000 -- (-2376.507) (-2382.493) (-2375.244) [-2382.115] * (-2379.674) (-2377.253) (-2380.138) [-2371.231] -- 0:05:30
Average standard deviation of split frequencies: 0.013461
376000 -- (-2379.300) (-2386.428) [-2378.411] (-2385.987) * (-2385.827) (-2377.284) [-2384.277] (-2380.215) -- 0:05:30
377000 -- [-2372.291] (-2374.177) (-2390.573) (-2380.677) * [-2380.858] (-2374.348) (-2374.019) (-2382.812) -- 0:05:28
378000 -- (-2388.260) (-2378.940) [-2384.822] (-2385.817) * (-2379.391) (-2382.194) (-2392.365) [-2375.480] -- 0:05:29
379000 -- (-2375.828) (-2381.217) (-2384.579) [-2375.842] * (-2374.412) (-2383.550) (-2381.753) [-2380.855] -- 0:05:27
380000 -- (-2379.213) (-2380.565) (-2377.741) [-2370.045] * (-2377.468) (-2396.336) (-2384.216) [-2379.372] -- 0:05:27
Average standard deviation of split frequencies: 0.014013
381000 -- [-2376.082] (-2398.336) (-2380.749) (-2378.161) * (-2377.596) [-2376.903] (-2390.582) (-2382.040) -- 0:05:28
382000 -- (-2383.591) (-2383.739) [-2375.675] (-2377.729) * (-2375.704) (-2390.036) [-2380.422] (-2371.032) -- 0:05:26
383000 -- (-2375.897) (-2370.703) [-2377.592] (-2380.219) * (-2378.216) (-2381.707) [-2380.584] (-2379.413) -- 0:05:27
384000 -- (-2373.342) [-2374.199] (-2387.621) (-2373.625) * (-2398.203) [-2371.982] (-2379.341) (-2389.793) -- 0:05:25
385000 -- (-2371.449) (-2390.757) [-2372.815] (-2385.637) * (-2379.693) [-2375.994] (-2374.512) (-2376.529) -- 0:05:25
Average standard deviation of split frequencies: 0.014269
386000 -- (-2382.248) (-2379.418) (-2380.162) [-2377.355] * (-2384.952) (-2387.151) [-2377.306] (-2374.349) -- 0:05:24
387000 -- (-2389.106) [-2381.478] (-2375.722) (-2373.740) * (-2379.291) [-2378.491] (-2390.075) (-2374.855) -- 0:05:24
388000 -- (-2396.215) (-2386.226) (-2375.023) [-2373.951] * (-2378.308) [-2372.274] (-2389.745) (-2378.541) -- 0:05:23
389000 -- (-2384.670) (-2383.376) [-2384.022] (-2383.025) * (-2377.589) (-2381.970) (-2375.877) [-2385.248] -- 0:05:23
390000 -- (-2383.171) [-2378.797] (-2376.253) (-2382.745) * (-2372.942) [-2376.295] (-2384.428) (-2381.179) -- 0:05:22
Average standard deviation of split frequencies: 0.014925
391000 -- (-2386.324) (-2382.135) (-2382.408) [-2374.534] * (-2387.728) [-2379.256] (-2374.548) (-2373.114) -- 0:05:22
392000 -- (-2380.424) [-2370.862] (-2384.363) (-2372.649) * (-2377.988) (-2378.988) (-2384.310) [-2388.793] -- 0:05:21
393000 -- (-2380.634) (-2379.458) (-2376.706) [-2388.345] * (-2385.845) (-2373.566) (-2372.489) [-2372.985] -- 0:05:21
394000 -- (-2382.639) [-2380.375] (-2375.758) (-2379.881) * [-2373.576] (-2383.602) (-2375.333) (-2378.413) -- 0:05:19
395000 -- (-2382.652) (-2379.001) [-2374.846] (-2381.548) * (-2382.097) (-2390.071) [-2381.144] (-2384.756) -- 0:05:20
Average standard deviation of split frequencies: 0.015225
396000 -- (-2380.372) (-2377.665) (-2378.357) [-2385.139] * (-2387.089) (-2382.099) (-2379.057) [-2378.037] -- 0:05:18
397000 -- [-2381.506] (-2373.594) (-2386.797) (-2383.283) * (-2396.181) [-2372.772] (-2375.173) (-2388.553) -- 0:05:18
398000 -- (-2396.510) (-2389.978) (-2377.765) [-2374.902] * (-2377.659) (-2374.019) [-2376.358] (-2380.048) -- 0:05:17
399000 -- (-2372.144) (-2380.017) (-2380.899) [-2370.234] * (-2381.894) [-2372.443] (-2379.098) (-2378.086) -- 0:05:17
400000 -- (-2374.174) (-2385.200) [-2380.326] (-2385.431) * (-2375.127) [-2380.294] (-2375.529) (-2386.599) -- 0:05:16
Average standard deviation of split frequencies: 0.015605
401000 -- (-2380.951) [-2382.464] (-2391.545) (-2390.077) * (-2379.034) (-2384.577) (-2388.910) [-2381.868] -- 0:05:16
402000 -- (-2378.144) [-2377.710] (-2386.473) (-2376.178) * (-2385.269) (-2377.232) (-2384.804) [-2378.066] -- 0:05:16
403000 -- [-2370.959] (-2388.643) (-2372.108) (-2372.517) * (-2390.164) (-2385.433) [-2372.484] (-2384.365) -- 0:05:15
404000 -- (-2380.579) [-2388.894] (-2379.721) (-2374.660) * (-2387.188) (-2383.309) (-2378.317) [-2376.406] -- 0:05:15
405000 -- [-2383.976] (-2398.873) (-2381.386) (-2385.099) * (-2390.727) [-2379.727] (-2375.683) (-2396.429) -- 0:05:14
Average standard deviation of split frequencies: 0.016805
406000 -- (-2385.024) [-2386.246] (-2380.803) (-2380.958) * (-2387.143) (-2384.919) (-2380.090) [-2384.278] -- 0:05:14
407000 -- (-2394.357) [-2378.496] (-2380.814) (-2381.486) * (-2384.770) (-2387.548) [-2373.556] (-2373.812) -- 0:05:13
408000 -- (-2379.521) (-2390.356) (-2375.490) [-2384.069] * (-2384.308) [-2381.343] (-2376.106) (-2382.420) -- 0:05:13
409000 -- (-2379.626) (-2384.207) (-2384.973) [-2375.305] * (-2386.018) [-2379.381] (-2392.563) (-2386.389) -- 0:05:12
410000 -- (-2387.424) [-2373.275] (-2377.863) (-2384.723) * [-2384.652] (-2374.270) (-2377.533) (-2379.394) -- 0:05:12
Average standard deviation of split frequencies: 0.016735
411000 -- (-2387.048) [-2375.724] (-2372.823) (-2383.003) * (-2385.005) (-2374.570) (-2378.906) [-2378.978] -- 0:05:10
412000 -- (-2381.281) (-2383.513) [-2380.392] (-2401.090) * (-2382.915) (-2376.737) [-2381.424] (-2384.197) -- 0:05:11
413000 -- (-2384.510) [-2370.159] (-2373.378) (-2379.580) * (-2378.701) (-2378.276) (-2383.539) [-2379.346] -- 0:05:09
414000 -- (-2382.709) [-2373.323] (-2380.002) (-2385.256) * [-2382.120] (-2384.983) (-2386.878) (-2400.247) -- 0:05:09
415000 -- (-2384.924) (-2382.477) (-2381.412) [-2371.197] * [-2376.429] (-2376.631) (-2379.033) (-2386.028) -- 0:05:08
Average standard deviation of split frequencies: 0.016342
416000 -- [-2386.287] (-2376.432) (-2376.036) (-2386.679) * [-2373.269] (-2373.678) (-2378.572) (-2388.218) -- 0:05:08
417000 -- [-2376.967] (-2378.114) (-2377.162) (-2380.481) * (-2383.530) [-2376.494] (-2388.335) (-2375.200) -- 0:05:07
418000 -- [-2369.695] (-2383.757) (-2376.870) (-2380.276) * (-2405.353) [-2385.092] (-2379.867) (-2382.004) -- 0:05:07
419000 -- (-2383.216) (-2382.858) [-2378.118] (-2390.844) * (-2378.716) [-2382.444] (-2383.190) (-2379.732) -- 0:05:07
420000 -- (-2379.013) [-2377.705] (-2380.956) (-2384.518) * (-2376.465) [-2376.871] (-2383.065) (-2384.749) -- 0:05:06
Average standard deviation of split frequencies: 0.016455
421000 -- (-2385.294) (-2371.344) [-2380.656] (-2378.082) * (-2385.680) (-2377.897) (-2373.635) [-2380.773] -- 0:05:06
422000 -- (-2382.417) (-2399.505) (-2375.655) [-2375.052] * [-2384.297] (-2368.852) (-2384.452) (-2388.201) -- 0:05:05
423000 -- (-2390.163) [-2379.072] (-2379.424) (-2382.052) * [-2382.058] (-2385.702) (-2376.918) (-2373.855) -- 0:05:05
424000 -- (-2375.269) (-2384.957) [-2380.683] (-2380.528) * [-2377.931] (-2388.968) (-2380.328) (-2381.129) -- 0:05:04
425000 -- (-2373.665) (-2384.020) (-2385.548) [-2384.744] * (-2381.554) [-2378.112] (-2376.686) (-2372.651) -- 0:05:04
Average standard deviation of split frequencies: 0.016133
426000 -- [-2372.399] (-2391.588) (-2379.102) (-2388.602) * [-2378.451] (-2382.381) (-2385.639) (-2376.857) -- 0:05:03
427000 -- (-2381.683) [-2373.872] (-2376.672) (-2377.871) * (-2387.509) (-2379.732) [-2375.593] (-2384.165) -- 0:05:03
428000 -- (-2378.904) (-2381.152) [-2374.641] (-2384.766) * [-2371.853] (-2372.985) (-2390.959) (-2377.229) -- 0:05:02
429000 -- (-2379.460) [-2383.931] (-2381.262) (-2373.209) * [-2377.874] (-2380.297) (-2382.593) (-2381.866) -- 0:05:02
430000 -- (-2386.097) (-2384.293) (-2383.855) [-2383.722] * (-2383.760) (-2377.796) (-2383.163) [-2383.177] -- 0:05:00
Average standard deviation of split frequencies: 0.015324
431000 -- [-2376.532] (-2384.452) (-2380.805) (-2381.017) * (-2378.933) (-2392.747) (-2378.408) [-2368.870] -- 0:05:01
432000 -- [-2388.153] (-2375.871) (-2391.778) (-2382.602) * [-2376.218] (-2381.842) (-2378.791) (-2384.273) -- 0:04:59
433000 -- (-2383.398) (-2379.122) (-2377.633) [-2377.388] * (-2382.450) [-2375.653] (-2380.562) (-2383.013) -- 0:04:59
434000 -- [-2380.996] (-2384.664) (-2379.103) (-2379.631) * [-2374.042] (-2381.624) (-2379.747) (-2389.627) -- 0:04:58
435000 -- (-2382.027) (-2378.626) [-2379.842] (-2384.782) * (-2395.353) (-2377.579) (-2383.228) [-2372.831] -- 0:04:58
Average standard deviation of split frequencies: 0.014795
436000 -- [-2371.682] (-2382.497) (-2384.444) (-2381.377) * (-2381.316) (-2386.320) (-2377.420) [-2378.497] -- 0:04:58
437000 -- (-2383.471) [-2379.378] (-2378.492) (-2380.864) * (-2373.143) (-2382.325) (-2381.793) [-2380.412] -- 0:04:57
438000 -- (-2377.098) [-2380.815] (-2382.289) (-2383.213) * (-2382.502) (-2375.249) [-2380.686] (-2381.240) -- 0:04:57
439000 -- (-2381.594) (-2388.376) [-2373.757] (-2382.877) * [-2379.119] (-2385.591) (-2383.966) (-2383.011) -- 0:04:56
440000 -- (-2381.376) [-2384.059] (-2376.357) (-2388.940) * (-2385.843) (-2381.244) (-2385.440) [-2380.258] -- 0:04:56
Average standard deviation of split frequencies: 0.014639
441000 -- (-2386.256) (-2381.167) [-2376.014] (-2380.716) * (-2377.338) (-2378.042) (-2386.731) [-2373.956] -- 0:04:55
442000 -- (-2376.740) [-2379.821] (-2376.657) (-2374.410) * (-2377.659) (-2378.764) [-2372.821] (-2381.964) -- 0:04:55
443000 -- (-2381.841) (-2382.228) [-2377.279] (-2381.905) * (-2386.081) (-2380.905) [-2375.698] (-2384.578) -- 0:04:54
444000 -- (-2386.898) [-2379.009] (-2380.085) (-2379.234) * (-2385.509) (-2382.332) [-2383.677] (-2390.182) -- 0:04:54
445000 -- (-2387.546) (-2391.262) (-2378.922) [-2378.371] * [-2376.455] (-2384.945) (-2377.879) (-2389.170) -- 0:04:53
Average standard deviation of split frequencies: 0.014909
446000 -- (-2384.315) [-2387.253] (-2379.243) (-2371.877) * (-2381.470) (-2389.922) [-2382.217] (-2380.913) -- 0:04:53
447000 -- (-2379.125) (-2383.641) [-2374.020] (-2373.288) * [-2376.169] (-2387.289) (-2387.550) (-2378.906) -- 0:04:51
448000 -- [-2387.398] (-2374.668) (-2375.440) (-2385.031) * [-2376.893] (-2389.241) (-2380.066) (-2377.846) -- 0:04:52
449000 -- [-2375.502] (-2378.292) (-2382.668) (-2383.767) * [-2377.625] (-2377.842) (-2378.587) (-2373.330) -- 0:04:50
450000 -- [-2384.517] (-2379.251) (-2379.100) (-2376.259) * (-2382.686) [-2377.334] (-2390.671) (-2381.214) -- 0:04:50
Average standard deviation of split frequencies: 0.014314
451000 -- (-2377.683) (-2385.964) [-2372.418] (-2383.444) * [-2372.706] (-2373.341) (-2393.065) (-2378.228) -- 0:04:49
452000 -- [-2377.243] (-2386.517) (-2383.036) (-2375.399) * (-2379.885) (-2380.102) (-2389.794) [-2372.195] -- 0:04:49
453000 -- [-2373.730] (-2387.307) (-2378.522) (-2368.526) * (-2381.368) (-2377.998) (-2381.563) [-2379.678] -- 0:04:49
454000 -- (-2385.682) [-2375.285] (-2377.019) (-2389.496) * (-2378.159) (-2384.370) (-2385.172) [-2374.557] -- 0:04:48
455000 -- (-2379.356) (-2380.831) [-2379.566] (-2385.658) * (-2389.587) (-2377.904) [-2377.911] (-2389.197) -- 0:04:48
Average standard deviation of split frequencies: 0.015235
456000 -- (-2396.163) [-2375.765] (-2380.202) (-2374.919) * (-2377.366) (-2391.581) (-2380.589) [-2367.956] -- 0:04:47
457000 -- (-2387.862) (-2381.343) [-2382.783] (-2377.761) * [-2380.546] (-2383.414) (-2383.841) (-2374.705) -- 0:04:47
458000 -- [-2375.947] (-2379.114) (-2378.107) (-2381.968) * (-2379.024) [-2371.170] (-2380.390) (-2379.558) -- 0:04:46
459000 -- (-2382.642) (-2373.446) [-2377.777] (-2376.367) * (-2380.899) (-2378.886) [-2385.547] (-2387.943) -- 0:04:46
460000 -- (-2377.697) [-2378.168] (-2383.752) (-2374.343) * (-2382.335) [-2372.563] (-2389.039) (-2390.144) -- 0:04:45
Average standard deviation of split frequencies: 0.015134
461000 -- (-2382.535) [-2372.185] (-2376.339) (-2388.710) * (-2377.427) [-2376.151] (-2385.850) (-2387.133) -- 0:04:45
462000 -- (-2383.371) [-2371.808] (-2382.263) (-2389.245) * (-2373.794) [-2379.423] (-2376.730) (-2388.858) -- 0:04:44
463000 -- (-2378.457) [-2383.740] (-2377.057) (-2390.893) * (-2384.281) (-2372.069) (-2384.704) [-2382.609] -- 0:04:44
464000 -- [-2377.800] (-2377.747) (-2379.882) (-2385.614) * (-2380.178) (-2376.788) [-2385.089] (-2380.696) -- 0:04:43
465000 -- (-2383.936) (-2380.046) [-2386.984] (-2394.981) * (-2378.790) [-2382.672] (-2380.393) (-2370.481) -- 0:04:43
Average standard deviation of split frequencies: 0.014162
466000 -- (-2376.498) [-2384.211] (-2383.974) (-2383.926) * (-2385.019) [-2381.273] (-2386.284) (-2392.502) -- 0:04:41
467000 -- (-2373.731) (-2384.568) [-2380.636] (-2384.380) * [-2374.619] (-2377.756) (-2383.852) (-2375.742) -- 0:04:41
468000 -- (-2377.945) (-2379.303) (-2377.907) [-2384.657] * (-2378.241) (-2378.973) (-2378.533) [-2381.053] -- 0:04:41
469000 -- [-2375.393] (-2380.485) (-2371.739) (-2378.435) * (-2383.947) [-2374.113] (-2381.544) (-2394.017) -- 0:04:40
470000 -- (-2376.788) [-2375.652] (-2376.991) (-2379.098) * [-2376.129] (-2377.852) (-2376.627) (-2389.546) -- 0:04:40
Average standard deviation of split frequencies: 0.013284
471000 -- [-2386.215] (-2381.423) (-2389.398) (-2379.158) * [-2377.766] (-2378.205) (-2387.163) (-2388.388) -- 0:04:39
472000 -- (-2385.644) [-2378.483] (-2385.204) (-2383.019) * (-2373.763) (-2378.682) [-2374.053] (-2375.448) -- 0:04:39
473000 -- (-2385.702) [-2385.816] (-2382.714) (-2388.048) * [-2380.944] (-2386.098) (-2380.705) (-2374.918) -- 0:04:38
474000 -- (-2386.386) [-2374.862] (-2379.480) (-2384.600) * (-2375.504) [-2377.218] (-2384.479) (-2380.567) -- 0:04:38
475000 -- (-2387.058) (-2375.532) (-2384.207) [-2380.899] * (-2373.278) (-2381.564) (-2379.611) [-2380.781] -- 0:04:37
Average standard deviation of split frequencies: 0.012874
476000 -- [-2380.051] (-2383.147) (-2378.538) (-2385.396) * (-2382.941) [-2377.228] (-2385.504) (-2382.708) -- 0:04:37
477000 -- (-2377.291) (-2376.071) (-2380.164) [-2377.554] * [-2376.489] (-2378.763) (-2373.794) (-2395.688) -- 0:04:36
478000 -- [-2383.491] (-2394.375) (-2371.142) (-2404.819) * (-2376.051) (-2402.280) (-2382.574) [-2388.948] -- 0:04:36
479000 -- [-2375.550] (-2390.721) (-2383.357) (-2390.953) * (-2383.396) (-2376.332) [-2377.104] (-2378.742) -- 0:04:35
480000 -- [-2376.234] (-2384.647) (-2375.690) (-2379.154) * (-2373.717) [-2377.763] (-2384.375) (-2375.679) -- 0:04:35
Average standard deviation of split frequencies: 0.013782
481000 -- [-2376.054] (-2387.871) (-2372.005) (-2377.671) * (-2379.421) (-2390.250) [-2386.321] (-2380.597) -- 0:04:34
482000 -- (-2379.220) [-2382.112] (-2375.792) (-2376.083) * [-2379.559] (-2393.358) (-2383.470) (-2386.079) -- 0:04:34
483000 -- [-2376.839] (-2378.893) (-2386.327) (-2377.365) * (-2384.017) (-2391.534) (-2376.538) [-2373.693] -- 0:04:32
484000 -- (-2379.265) [-2377.804] (-2386.159) (-2387.552) * (-2385.452) [-2379.415] (-2376.057) (-2380.539) -- 0:04:32
485000 -- (-2379.246) (-2375.023) (-2381.653) [-2381.264] * (-2384.551) (-2373.841) [-2369.583] (-2385.679) -- 0:04:32
Average standard deviation of split frequencies: 0.013784
486000 -- (-2374.046) (-2378.490) [-2381.317] (-2393.700) * (-2381.289) [-2372.708] (-2383.914) (-2375.697) -- 0:04:31
487000 -- (-2384.016) (-2389.725) (-2383.776) [-2384.054] * (-2387.246) (-2379.034) (-2388.806) [-2373.626] -- 0:04:31
488000 -- (-2377.841) [-2375.813] (-2387.409) (-2379.664) * (-2375.069) (-2380.377) (-2379.356) [-2389.096] -- 0:04:30
489000 -- (-2382.383) (-2380.400) (-2395.603) [-2376.956] * (-2380.502) [-2374.742] (-2376.058) (-2378.498) -- 0:04:30
490000 -- [-2377.371] (-2399.367) (-2384.829) (-2375.091) * (-2369.233) (-2385.618) [-2377.102] (-2381.077) -- 0:04:29
Average standard deviation of split frequencies: 0.015220
491000 -- (-2385.691) [-2378.237] (-2382.335) (-2372.646) * (-2390.778) [-2375.892] (-2379.108) (-2373.778) -- 0:04:29
492000 -- (-2376.200) [-2380.400] (-2386.315) (-2384.330) * (-2397.370) [-2384.120] (-2372.657) (-2382.972) -- 0:04:28
493000 -- (-2385.495) (-2375.094) [-2376.384] (-2372.776) * (-2385.268) [-2377.488] (-2379.602) (-2379.184) -- 0:04:28
494000 -- (-2381.162) (-2375.147) [-2377.698] (-2383.064) * [-2376.898] (-2379.098) (-2383.066) (-2379.966) -- 0:04:27
495000 -- (-2378.881) [-2376.248] (-2380.380) (-2383.326) * (-2379.633) [-2377.327] (-2382.835) (-2388.100) -- 0:04:27
Average standard deviation of split frequencies: 0.014856
496000 -- (-2388.210) [-2391.800] (-2378.385) (-2378.306) * (-2387.854) (-2371.740) [-2384.205] (-2389.604) -- 0:04:26
497000 -- (-2370.324) [-2383.207] (-2386.241) (-2382.445) * (-2397.116) (-2370.390) (-2387.209) [-2369.868] -- 0:04:26
498000 -- (-2376.586) [-2376.890] (-2386.529) (-2372.100) * (-2386.866) (-2380.008) (-2379.760) [-2373.733] -- 0:04:25
499000 -- (-2377.514) (-2387.687) [-2384.975] (-2386.499) * (-2375.838) (-2386.386) [-2375.975] (-2370.999) -- 0:04:25
500000 -- (-2387.346) (-2380.860) [-2383.431] (-2382.907) * (-2378.980) (-2395.147) [-2375.815] (-2379.494) -- 0:04:24
Average standard deviation of split frequencies: 0.014768
501000 -- (-2380.365) (-2383.266) (-2378.439) [-2377.679] * (-2388.309) (-2381.776) (-2395.138) [-2388.673] -- 0:04:23
502000 -- (-2372.784) (-2383.028) [-2389.898] (-2383.808) * (-2375.546) (-2381.470) (-2374.134) [-2380.755] -- 0:04:23
503000 -- [-2375.329] (-2380.358) (-2376.023) (-2371.384) * (-2379.792) [-2381.047] (-2386.387) (-2373.777) -- 0:04:22
504000 -- (-2375.223) [-2371.555] (-2372.019) (-2380.813) * (-2378.984) [-2379.226] (-2393.098) (-2372.156) -- 0:04:22
505000 -- [-2373.769] (-2377.446) (-2377.007) (-2384.946) * (-2384.475) (-2391.372) [-2375.437] (-2378.137) -- 0:04:21
Average standard deviation of split frequencies: 0.014269
506000 -- (-2387.156) (-2378.629) (-2380.121) [-2379.941] * (-2379.860) (-2380.851) (-2383.861) [-2373.064] -- 0:04:21
507000 -- (-2379.843) [-2375.525] (-2371.407) (-2387.433) * (-2382.729) (-2376.398) [-2385.286] (-2378.915) -- 0:04:20
508000 -- (-2388.923) (-2385.482) (-2387.936) [-2379.394] * [-2387.861] (-2399.595) (-2374.364) (-2380.370) -- 0:04:20
509000 -- (-2383.644) (-2378.821) (-2384.802) [-2379.485] * (-2380.374) (-2373.462) (-2376.263) [-2376.620] -- 0:04:19
510000 -- (-2375.932) (-2377.957) [-2371.529] (-2393.499) * [-2373.322] (-2378.385) (-2393.133) (-2383.666) -- 0:04:19
Average standard deviation of split frequencies: 0.014333
511000 -- (-2377.874) [-2373.753] (-2378.814) (-2388.200) * (-2382.243) (-2381.452) [-2375.412] (-2391.203) -- 0:04:18
512000 -- (-2378.487) (-2382.359) [-2377.336] (-2389.924) * (-2385.860) [-2375.230] (-2373.598) (-2376.035) -- 0:04:18
513000 -- (-2376.313) (-2387.714) (-2380.451) [-2376.164] * [-2375.676] (-2398.109) (-2378.267) (-2384.079) -- 0:04:17
514000 -- [-2368.219] (-2377.024) (-2382.414) (-2382.386) * [-2382.285] (-2371.921) (-2388.286) (-2379.741) -- 0:04:17
515000 -- [-2378.809] (-2378.781) (-2384.247) (-2386.859) * (-2376.279) (-2368.765) [-2379.882] (-2379.980) -- 0:04:16
Average standard deviation of split frequencies: 0.014088
516000 -- (-2383.228) [-2376.370] (-2381.943) (-2385.882) * (-2395.065) (-2377.530) [-2378.666] (-2399.130) -- 0:04:16
517000 -- (-2377.912) (-2371.030) [-2374.385] (-2381.722) * [-2378.067] (-2391.446) (-2377.667) (-2381.921) -- 0:04:15
518000 -- (-2376.027) (-2382.718) [-2378.389] (-2379.437) * (-2378.874) (-2389.869) (-2385.165) [-2382.133] -- 0:04:14
519000 -- (-2379.719) (-2375.427) [-2370.959] (-2378.593) * [-2374.694] (-2373.089) (-2382.229) (-2384.003) -- 0:04:13
520000 -- (-2395.005) (-2381.578) (-2389.715) [-2382.372] * [-2378.765] (-2381.835) (-2387.510) (-2376.139) -- 0:04:13
Average standard deviation of split frequencies: 0.014343
521000 -- (-2375.174) (-2372.758) (-2384.049) [-2377.074] * (-2380.186) (-2386.725) (-2378.189) [-2380.195] -- 0:04:13
522000 -- [-2379.173] (-2385.823) (-2389.010) (-2385.506) * [-2376.630] (-2379.474) (-2374.873) (-2381.567) -- 0:04:12
523000 -- [-2376.360] (-2377.681) (-2379.208) (-2377.449) * (-2382.255) (-2374.469) (-2381.207) [-2382.152] -- 0:04:12
524000 -- (-2377.304) (-2390.383) (-2401.117) [-2369.408] * [-2376.216] (-2385.672) (-2381.601) (-2386.997) -- 0:04:11
525000 -- (-2382.238) (-2377.292) [-2374.420] (-2385.965) * (-2386.511) (-2377.888) (-2378.055) [-2381.285] -- 0:04:11
Average standard deviation of split frequencies: 0.014386
526000 -- (-2375.929) (-2389.741) [-2380.050] (-2383.813) * (-2381.242) (-2377.839) [-2384.037] (-2380.986) -- 0:04:10
527000 -- [-2373.314] (-2378.824) (-2370.726) (-2388.667) * [-2388.438] (-2382.027) (-2388.750) (-2378.024) -- 0:04:10
528000 -- [-2384.707] (-2374.457) (-2376.932) (-2391.899) * (-2380.288) [-2378.534] (-2371.854) (-2387.571) -- 0:04:09
529000 -- (-2384.419) (-2378.059) (-2379.885) [-2381.950] * (-2379.109) [-2371.079] (-2389.492) (-2382.721) -- 0:04:09
530000 -- (-2381.234) (-2376.536) [-2380.106] (-2389.544) * (-2381.957) (-2375.744) [-2380.210] (-2376.186) -- 0:04:08
Average standard deviation of split frequencies: 0.014120
531000 -- (-2375.301) (-2379.874) [-2383.026] (-2384.588) * (-2380.181) [-2381.856] (-2380.636) (-2377.435) -- 0:04:08
532000 -- (-2391.946) (-2373.754) (-2377.218) [-2382.123] * [-2381.568] (-2387.827) (-2378.093) (-2381.824) -- 0:04:07
533000 -- [-2375.884] (-2386.426) (-2386.414) (-2369.249) * (-2384.398) (-2382.369) [-2377.364] (-2378.625) -- 0:04:07
534000 -- [-2374.174] (-2377.719) (-2385.570) (-2392.714) * [-2376.261] (-2383.121) (-2387.225) (-2380.035) -- 0:04:06
535000 -- (-2371.899) (-2374.201) (-2384.676) [-2379.734] * [-2378.827] (-2391.465) (-2380.461) (-2384.598) -- 0:04:05
Average standard deviation of split frequencies: 0.014257
536000 -- (-2395.698) (-2384.478) (-2380.120) [-2371.465] * [-2376.972] (-2382.428) (-2381.998) (-2383.510) -- 0:04:04
537000 -- (-2385.925) (-2393.319) (-2381.801) [-2383.997] * (-2376.122) (-2380.376) [-2387.647] (-2381.865) -- 0:04:04
538000 -- (-2386.862) (-2383.861) [-2378.295] (-2384.889) * (-2392.364) (-2381.008) (-2380.544) [-2380.541] -- 0:04:03
539000 -- (-2387.514) (-2382.384) [-2378.406] (-2377.629) * [-2380.646] (-2387.503) (-2372.052) (-2379.390) -- 0:04:03
540000 -- (-2372.201) (-2376.511) (-2374.218) [-2373.593] * (-2373.766) (-2387.644) [-2382.310] (-2380.608) -- 0:04:02
Average standard deviation of split frequencies: 0.014776
541000 -- (-2380.557) (-2373.129) (-2391.395) [-2386.072] * (-2377.531) (-2383.114) (-2387.454) [-2374.045] -- 0:04:02
542000 -- [-2374.072] (-2386.804) (-2386.262) (-2372.831) * (-2378.067) [-2386.140] (-2385.165) (-2376.022) -- 0:04:01
543000 -- (-2378.363) (-2387.811) [-2375.396] (-2384.110) * (-2385.315) [-2378.376] (-2373.444) (-2380.610) -- 0:04:01
544000 -- (-2381.655) (-2380.944) (-2391.595) [-2377.314] * [-2374.722] (-2374.644) (-2377.141) (-2372.105) -- 0:04:00
545000 -- (-2374.755) (-2385.906) [-2387.859] (-2387.381) * (-2380.168) [-2380.218] (-2378.377) (-2389.208) -- 0:04:00
Average standard deviation of split frequencies: 0.015314
546000 -- [-2377.532] (-2394.759) (-2369.826) (-2390.386) * (-2377.913) [-2378.990] (-2382.975) (-2383.299) -- 0:04:00
547000 -- (-2384.022) [-2376.738] (-2378.413) (-2379.144) * [-2378.785] (-2384.193) (-2390.583) (-2388.615) -- 0:03:59
548000 -- (-2376.859) [-2377.581] (-2376.486) (-2388.747) * [-2377.950] (-2381.081) (-2378.247) (-2383.255) -- 0:03:59
549000 -- (-2390.871) (-2393.525) (-2383.680) [-2371.971] * [-2377.083] (-2377.819) (-2387.179) (-2377.646) -- 0:03:58
550000 -- (-2386.220) (-2378.985) (-2378.578) [-2384.569] * (-2376.364) [-2387.202] (-2401.372) (-2381.298) -- 0:03:58
Average standard deviation of split frequencies: 0.015724
551000 -- [-2376.276] (-2384.960) (-2384.137) (-2380.288) * [-2381.363] (-2393.708) (-2379.100) (-2376.523) -- 0:03:57
552000 -- (-2382.155) (-2384.653) [-2375.819] (-2372.461) * (-2374.416) (-2374.408) (-2375.585) [-2384.390] -- 0:03:56
553000 -- (-2384.864) [-2369.317] (-2382.004) (-2375.529) * [-2373.711] (-2386.840) (-2376.793) (-2380.577) -- 0:03:56
554000 -- (-2378.108) [-2381.927] (-2375.738) (-2377.153) * (-2385.131) (-2390.280) (-2375.633) [-2382.461] -- 0:03:55
555000 -- (-2385.416) (-2379.234) [-2382.079] (-2390.062) * (-2390.486) (-2373.147) (-2377.760) [-2384.436] -- 0:03:54
Average standard deviation of split frequencies: 0.015440
556000 -- [-2378.634] (-2400.340) (-2375.711) (-2395.393) * (-2389.716) [-2377.178] (-2381.448) (-2373.677) -- 0:03:54
557000 -- (-2375.226) [-2376.322] (-2381.544) (-2379.064) * (-2393.459) [-2383.224] (-2376.846) (-2376.755) -- 0:03:53
558000 -- (-2391.873) (-2367.868) [-2375.589] (-2384.824) * (-2383.700) [-2377.092] (-2388.763) (-2382.687) -- 0:03:53
559000 -- [-2379.597] (-2372.224) (-2382.235) (-2386.877) * (-2382.919) (-2378.709) [-2378.395] (-2389.252) -- 0:03:53
560000 -- (-2393.797) (-2385.976) [-2369.935] (-2391.395) * (-2385.261) [-2382.017] (-2378.487) (-2375.194) -- 0:03:52
Average standard deviation of split frequencies: 0.015533
561000 -- (-2389.667) [-2377.719] (-2373.733) (-2378.053) * (-2382.440) [-2375.103] (-2385.352) (-2370.676) -- 0:03:52
562000 -- (-2379.612) (-2390.586) (-2393.271) [-2376.765] * (-2375.076) [-2389.299] (-2387.632) (-2383.182) -- 0:03:51
563000 -- [-2376.132] (-2375.680) (-2399.453) (-2387.002) * (-2371.579) (-2382.948) [-2387.221] (-2371.434) -- 0:03:51
564000 -- [-2377.179] (-2376.920) (-2382.374) (-2379.047) * (-2377.271) (-2389.150) (-2376.797) [-2372.254] -- 0:03:50
565000 -- [-2375.721] (-2378.854) (-2383.420) (-2387.698) * (-2384.556) (-2382.070) (-2374.620) [-2377.121] -- 0:03:50
Average standard deviation of split frequencies: 0.014816
566000 -- (-2378.839) (-2387.138) [-2372.029] (-2382.927) * [-2382.397] (-2384.746) (-2379.330) (-2378.810) -- 0:03:49
567000 -- (-2378.897) (-2387.949) [-2376.055] (-2383.114) * (-2382.307) (-2386.306) (-2381.325) [-2377.995] -- 0:03:49
568000 -- (-2382.084) [-2378.436] (-2385.348) (-2390.024) * (-2370.293) (-2388.170) (-2382.271) [-2383.166] -- 0:03:48
569000 -- (-2382.318) [-2383.253] (-2378.046) (-2384.191) * [-2380.439] (-2390.915) (-2395.805) (-2378.423) -- 0:03:47
570000 -- (-2383.994) [-2380.604] (-2379.042) (-2373.525) * (-2378.297) (-2390.293) [-2379.748] (-2384.012) -- 0:03:47
Average standard deviation of split frequencies: 0.015130
571000 -- (-2387.300) (-2390.066) [-2378.300] (-2384.674) * [-2374.088] (-2378.306) (-2382.548) (-2383.788) -- 0:03:46
572000 -- (-2379.602) (-2384.105) (-2389.856) [-2375.812] * [-2383.486] (-2386.231) (-2381.500) (-2375.125) -- 0:03:45
573000 -- (-2385.894) (-2384.796) [-2379.630] (-2378.596) * (-2393.466) (-2379.145) (-2378.919) [-2390.922] -- 0:03:45
574000 -- [-2371.589] (-2395.183) (-2376.606) (-2382.312) * (-2378.695) [-2376.785] (-2388.122) (-2385.016) -- 0:03:44
575000 -- (-2377.584) (-2378.891) [-2374.792] (-2382.818) * (-2383.915) (-2385.532) [-2388.694] (-2386.211) -- 0:03:44
Average standard deviation of split frequencies: 0.015248
576000 -- (-2390.935) (-2384.276) (-2377.332) [-2376.782] * (-2382.439) (-2375.173) [-2385.200] (-2380.888) -- 0:03:44
577000 -- (-2370.629) (-2379.440) [-2377.415] (-2376.531) * (-2383.266) (-2386.561) [-2378.524] (-2384.588) -- 0:03:43
578000 -- [-2378.727] (-2389.785) (-2374.052) (-2383.950) * (-2383.957) [-2381.774] (-2382.343) (-2388.790) -- 0:03:43
579000 -- [-2381.857] (-2382.321) (-2375.242) (-2380.557) * (-2389.210) [-2373.446] (-2381.130) (-2381.391) -- 0:03:42
580000 -- (-2387.053) (-2383.273) [-2369.588] (-2392.470) * (-2376.426) (-2375.092) [-2373.191] (-2386.614) -- 0:03:42
Average standard deviation of split frequencies: 0.014912
581000 -- [-2369.740] (-2375.322) (-2390.677) (-2394.305) * (-2374.076) [-2378.025] (-2378.325) (-2378.986) -- 0:03:41
582000 -- (-2379.202) (-2380.957) (-2385.773) [-2374.251] * (-2379.461) (-2378.391) (-2377.199) [-2374.968] -- 0:03:41
583000 -- (-2393.368) (-2376.626) (-2377.217) [-2382.761] * (-2391.145) (-2375.250) (-2391.989) [-2376.680] -- 0:03:40
584000 -- (-2388.402) (-2378.168) [-2384.020] (-2384.459) * (-2379.177) (-2374.094) (-2375.223) [-2386.108] -- 0:03:40
585000 -- (-2383.110) (-2382.464) [-2376.373] (-2374.639) * [-2379.676] (-2373.927) (-2384.104) (-2379.953) -- 0:03:39
Average standard deviation of split frequencies: 0.014692
586000 -- (-2383.225) (-2382.352) (-2378.510) [-2378.780] * [-2373.777] (-2380.842) (-2390.948) (-2387.755) -- 0:03:39
587000 -- [-2378.688] (-2386.140) (-2374.507) (-2386.634) * (-2384.695) (-2380.380) (-2383.332) [-2383.330] -- 0:03:38
588000 -- (-2376.153) (-2383.282) (-2379.333) [-2374.533] * (-2384.773) (-2381.479) [-2377.125] (-2393.746) -- 0:03:37
589000 -- (-2384.692) [-2380.516] (-2379.215) (-2381.679) * (-2381.855) (-2383.417) [-2371.286] (-2378.891) -- 0:03:37
590000 -- [-2375.638] (-2380.940) (-2378.755) (-2388.607) * [-2374.766] (-2378.144) (-2382.583) (-2378.482) -- 0:03:36
Average standard deviation of split frequencies: 0.015206
591000 -- [-2377.705] (-2379.930) (-2375.156) (-2391.432) * (-2373.913) (-2384.358) (-2391.711) [-2371.612] -- 0:03:35
592000 -- (-2376.459) (-2380.351) (-2381.781) [-2385.248] * [-2379.866] (-2379.010) (-2373.302) (-2373.120) -- 0:03:35
593000 -- (-2368.877) (-2394.304) (-2386.631) [-2383.893] * (-2382.456) (-2377.732) (-2381.133) [-2378.367] -- 0:03:35
594000 -- (-2369.003) (-2384.915) [-2377.643] (-2383.868) * (-2374.965) (-2383.556) (-2381.791) [-2385.950] -- 0:03:34
595000 -- (-2388.181) (-2393.835) [-2376.140] (-2378.712) * (-2388.692) (-2376.844) [-2382.293] (-2382.766) -- 0:03:34
Average standard deviation of split frequencies: 0.013862
596000 -- [-2381.499] (-2380.194) (-2384.375) (-2379.968) * (-2379.166) (-2378.924) (-2391.275) [-2378.004] -- 0:03:33
597000 -- [-2378.253] (-2378.160) (-2388.738) (-2386.712) * [-2379.555] (-2378.504) (-2381.018) (-2385.781) -- 0:03:33
598000 -- (-2381.647) [-2379.462] (-2387.005) (-2379.896) * (-2378.787) (-2388.256) [-2379.670] (-2379.332) -- 0:03:32
599000 -- (-2370.637) (-2377.113) [-2384.608] (-2378.816) * (-2376.990) [-2376.606] (-2389.390) (-2385.167) -- 0:03:32
600000 -- [-2370.377] (-2382.523) (-2383.835) (-2374.353) * (-2374.427) [-2379.112] (-2391.876) (-2384.273) -- 0:03:31
Average standard deviation of split frequencies: 0.014539
601000 -- (-2382.631) (-2391.803) (-2379.912) [-2382.977] * [-2377.119] (-2383.976) (-2383.563) (-2381.172) -- 0:03:31
602000 -- (-2391.549) (-2384.991) (-2381.204) [-2385.310] * (-2383.730) (-2382.418) (-2376.221) [-2374.286] -- 0:03:30
603000 -- [-2378.348] (-2386.387) (-2386.988) (-2383.483) * [-2383.647] (-2382.894) (-2375.282) (-2377.402) -- 0:03:30
604000 -- (-2379.975) [-2379.733] (-2381.318) (-2375.385) * [-2379.551] (-2376.433) (-2379.010) (-2372.904) -- 0:03:29
605000 -- [-2370.787] (-2388.143) (-2381.686) (-2392.569) * [-2375.938] (-2390.737) (-2374.558) (-2374.291) -- 0:03:28
Average standard deviation of split frequencies: 0.014616
606000 -- (-2379.071) (-2385.157) (-2380.379) [-2378.132] * (-2384.935) [-2379.701] (-2384.126) (-2378.884) -- 0:03:28
607000 -- (-2373.487) (-2402.460) (-2384.941) [-2376.051] * (-2379.454) (-2386.459) [-2376.668] (-2382.826) -- 0:03:27
608000 -- (-2381.657) (-2388.320) [-2379.115] (-2376.768) * (-2380.215) (-2380.392) (-2387.131) [-2388.194] -- 0:03:26
609000 -- (-2381.873) (-2382.474) [-2379.001] (-2382.113) * (-2382.391) (-2381.598) [-2384.579] (-2387.991) -- 0:03:26
610000 -- (-2383.136) [-2381.255] (-2376.948) (-2376.937) * (-2384.074) (-2381.844) [-2378.638] (-2383.544) -- 0:03:25
Average standard deviation of split frequencies: 0.014098
611000 -- [-2376.402] (-2380.571) (-2389.290) (-2373.913) * (-2377.760) (-2388.458) (-2376.553) [-2372.477] -- 0:03:25
612000 -- (-2379.215) [-2376.667] (-2375.991) (-2376.526) * (-2375.486) (-2379.602) [-2379.395] (-2388.600) -- 0:03:25
613000 -- (-2382.512) [-2383.387] (-2394.291) (-2386.685) * (-2374.970) (-2384.898) (-2380.021) [-2373.990] -- 0:03:24
614000 -- (-2389.190) [-2378.208] (-2384.375) (-2372.658) * (-2387.715) [-2381.489] (-2385.851) (-2371.927) -- 0:03:24
615000 -- (-2369.399) (-2375.788) (-2381.933) [-2377.416] * (-2392.188) [-2378.667] (-2386.476) (-2383.516) -- 0:03:23
Average standard deviation of split frequencies: 0.014218
616000 -- (-2391.369) [-2380.629] (-2378.129) (-2378.164) * (-2372.816) [-2372.450] (-2375.526) (-2387.551) -- 0:03:23
617000 -- (-2377.965) (-2377.955) (-2381.284) [-2373.967] * (-2382.638) (-2388.355) [-2377.271] (-2387.999) -- 0:03:22
618000 -- (-2382.208) (-2376.708) (-2375.125) [-2377.200] * [-2379.437] (-2386.450) (-2381.878) (-2380.981) -- 0:03:22
619000 -- [-2378.407] (-2374.169) (-2372.708) (-2383.804) * (-2370.681) (-2382.772) [-2375.150] (-2374.193) -- 0:03:21
620000 -- [-2375.485] (-2381.568) (-2377.234) (-2375.927) * (-2378.784) [-2377.788] (-2385.759) (-2382.183) -- 0:03:21
Average standard deviation of split frequencies: 0.014431
621000 -- (-2381.222) (-2379.638) (-2374.040) [-2376.475] * (-2382.611) [-2377.358] (-2377.124) (-2388.442) -- 0:03:20
622000 -- (-2380.565) [-2388.418] (-2375.880) (-2385.632) * (-2386.255) (-2380.422) [-2377.485] (-2402.215) -- 0:03:19
623000 -- (-2384.576) [-2378.463] (-2389.614) (-2378.210) * (-2381.049) (-2375.419) [-2380.509] (-2381.812) -- 0:03:19
624000 -- (-2379.854) (-2380.566) [-2389.429] (-2380.640) * (-2386.117) (-2383.432) (-2383.521) [-2378.591] -- 0:03:18
625000 -- [-2377.090] (-2380.196) (-2373.141) (-2377.394) * [-2377.090] (-2377.288) (-2392.991) (-2374.842) -- 0:03:18
Average standard deviation of split frequencies: 0.014229
626000 -- (-2383.205) [-2383.395] (-2378.874) (-2392.616) * (-2381.106) (-2384.978) [-2378.253] (-2373.250) -- 0:03:17
627000 -- [-2379.900] (-2380.246) (-2378.948) (-2381.142) * (-2390.062) (-2381.503) [-2377.788] (-2375.504) -- 0:03:16
628000 -- [-2394.136] (-2392.977) (-2383.152) (-2376.204) * (-2386.144) (-2388.531) [-2372.704] (-2385.048) -- 0:03:16
629000 -- (-2386.857) [-2383.503] (-2377.651) (-2371.337) * (-2391.285) (-2380.480) (-2377.717) [-2375.733] -- 0:03:15
630000 -- (-2382.339) (-2383.755) (-2373.012) [-2381.768] * (-2382.077) (-2385.423) (-2371.231) [-2377.954] -- 0:03:15
Average standard deviation of split frequencies: 0.013966
631000 -- (-2378.647) [-2383.775] (-2379.793) (-2380.699) * (-2397.805) (-2376.912) (-2372.243) [-2370.486] -- 0:03:14
632000 -- (-2389.370) (-2370.420) [-2379.579] (-2389.384) * (-2383.708) (-2376.807) [-2382.623] (-2391.663) -- 0:03:14
633000 -- (-2382.927) (-2380.208) [-2371.089] (-2385.373) * [-2381.539] (-2378.297) (-2388.822) (-2388.142) -- 0:03:13
634000 -- (-2380.949) (-2388.976) [-2369.626] (-2375.322) * [-2377.222] (-2376.042) (-2377.207) (-2374.708) -- 0:03:13
635000 -- (-2383.001) (-2380.338) (-2375.807) [-2381.083] * (-2380.913) [-2373.852] (-2377.252) (-2387.131) -- 0:03:13
Average standard deviation of split frequencies: 0.013654
636000 -- [-2376.714] (-2386.708) (-2381.570) (-2372.950) * (-2377.291) (-2377.146) (-2383.964) [-2384.926] -- 0:03:12
637000 -- (-2372.100) [-2385.102] (-2373.063) (-2382.349) * (-2379.226) (-2380.532) (-2390.494) [-2382.134] -- 0:03:12
638000 -- [-2380.955] (-2380.052) (-2377.958) (-2374.818) * (-2375.817) [-2380.515] (-2375.624) (-2381.405) -- 0:03:11
639000 -- [-2380.308] (-2384.734) (-2373.583) (-2376.462) * (-2381.119) (-2377.836) [-2383.603] (-2377.289) -- 0:03:10
640000 -- [-2379.658] (-2385.609) (-2370.988) (-2380.778) * (-2384.906) [-2380.971] (-2381.260) (-2381.868) -- 0:03:10
Average standard deviation of split frequencies: 0.013787
641000 -- (-2386.309) (-2382.667) [-2378.593] (-2393.655) * (-2383.177) (-2385.967) (-2380.893) [-2375.126] -- 0:03:09
642000 -- (-2375.967) [-2384.431] (-2379.800) (-2388.738) * (-2382.985) (-2381.709) [-2372.646] (-2384.680) -- 0:03:09
643000 -- (-2385.831) (-2383.700) (-2378.152) [-2382.723] * (-2377.486) (-2384.038) [-2376.403] (-2374.004) -- 0:03:08
644000 -- [-2370.929] (-2378.959) (-2370.159) (-2380.554) * (-2376.708) (-2376.128) [-2375.005] (-2371.308) -- 0:03:07
645000 -- (-2388.101) (-2377.963) [-2383.231] (-2385.118) * [-2380.994] (-2381.190) (-2391.169) (-2375.908) -- 0:03:07
Average standard deviation of split frequencies: 0.013289
646000 -- (-2373.361) [-2377.054] (-2380.135) (-2388.551) * (-2378.715) [-2376.756] (-2380.013) (-2386.125) -- 0:03:06
647000 -- [-2378.402] (-2375.630) (-2382.242) (-2377.156) * (-2375.175) (-2382.967) [-2380.931] (-2380.397) -- 0:03:06
648000 -- (-2375.214) (-2380.273) (-2379.926) [-2371.757] * (-2379.330) (-2376.828) [-2378.522] (-2375.569) -- 0:03:05
649000 -- (-2376.992) (-2380.629) (-2378.000) [-2378.327] * (-2384.088) (-2389.442) (-2374.861) [-2372.367] -- 0:03:05
650000 -- (-2374.513) (-2394.748) [-2378.738] (-2382.687) * [-2384.764] (-2382.787) (-2385.392) (-2380.214) -- 0:03:04
Average standard deviation of split frequencies: 0.012774
651000 -- (-2382.104) (-2385.337) (-2387.251) [-2373.710] * (-2378.790) [-2376.370] (-2383.712) (-2375.508) -- 0:03:04
652000 -- [-2377.932] (-2384.194) (-2389.152) (-2377.720) * [-2382.278] (-2370.380) (-2381.017) (-2373.494) -- 0:03:04
653000 -- [-2377.236] (-2390.317) (-2391.299) (-2383.723) * (-2372.486) (-2381.783) [-2378.232] (-2372.383) -- 0:03:03
654000 -- (-2381.835) [-2381.368] (-2377.459) (-2382.960) * [-2376.830] (-2379.537) (-2380.793) (-2374.842) -- 0:03:03
655000 -- (-2374.649) (-2381.919) (-2389.465) [-2373.830] * [-2377.193] (-2383.115) (-2381.463) (-2393.949) -- 0:03:02
Average standard deviation of split frequencies: 0.013389
656000 -- (-2378.257) (-2371.846) (-2382.157) [-2382.666] * [-2380.426] (-2380.121) (-2385.214) (-2393.172) -- 0:03:01
657000 -- (-2386.741) (-2372.826) (-2375.929) [-2375.741] * (-2386.886) (-2387.447) [-2377.410] (-2378.363) -- 0:03:01
658000 -- (-2382.746) (-2393.107) (-2373.300) [-2377.193] * [-2378.289] (-2380.118) (-2380.390) (-2386.481) -- 0:03:00
659000 -- (-2374.185) (-2384.879) (-2376.954) [-2375.770] * [-2381.111] (-2383.386) (-2391.925) (-2379.340) -- 0:03:00
660000 -- (-2380.508) (-2381.188) (-2373.433) [-2378.623] * [-2377.817] (-2377.724) (-2385.207) (-2386.493) -- 0:02:59
Average standard deviation of split frequencies: 0.013519
661000 -- [-2376.506] (-2395.329) (-2389.252) (-2373.351) * [-2378.987] (-2377.113) (-2382.369) (-2387.227) -- 0:02:58
662000 -- [-2377.117] (-2391.136) (-2380.720) (-2390.745) * [-2380.965] (-2389.165) (-2385.059) (-2386.545) -- 0:02:58
663000 -- (-2380.140) (-2374.402) (-2382.637) [-2383.034] * (-2381.721) [-2372.155] (-2388.476) (-2382.872) -- 0:02:57
664000 -- (-2382.458) (-2379.099) [-2373.078] (-2386.883) * (-2385.796) (-2376.056) [-2377.241] (-2381.612) -- 0:02:57
665000 -- (-2386.506) (-2378.065) [-2380.251] (-2378.011) * (-2383.935) [-2381.115] (-2390.885) (-2386.143) -- 0:02:56
Average standard deviation of split frequencies: 0.013747
666000 -- [-2369.432] (-2390.298) (-2381.608) (-2379.046) * (-2375.774) (-2377.221) (-2381.229) [-2371.952] -- 0:02:56
667000 -- (-2372.047) (-2384.539) (-2379.376) [-2382.904] * (-2383.110) (-2383.652) (-2377.931) [-2377.939] -- 0:02:55
668000 -- (-2379.110) (-2372.932) [-2377.236] (-2389.167) * (-2376.232) [-2377.239] (-2390.522) (-2385.416) -- 0:02:55
669000 -- (-2376.411) [-2381.044] (-2380.611) (-2384.388) * (-2374.403) (-2378.129) [-2383.514] (-2372.760) -- 0:02:54
670000 -- [-2372.931] (-2381.790) (-2382.653) (-2385.740) * (-2384.948) (-2373.704) [-2373.012] (-2375.038) -- 0:02:54
Average standard deviation of split frequencies: 0.013540
671000 -- (-2375.189) [-2380.329] (-2381.306) (-2387.084) * [-2379.800] (-2379.474) (-2383.516) (-2377.960) -- 0:02:53
672000 -- (-2386.318) (-2379.794) (-2379.731) [-2377.683] * [-2381.361] (-2383.950) (-2384.036) (-2391.622) -- 0:02:53
673000 -- (-2389.634) [-2375.064] (-2376.232) (-2387.851) * (-2376.796) (-2389.319) (-2380.597) [-2379.970] -- 0:02:52
674000 -- (-2378.122) (-2387.154) [-2379.888] (-2383.475) * (-2384.053) [-2381.177] (-2386.620) (-2374.169) -- 0:02:52
675000 -- (-2374.969) [-2378.273] (-2386.539) (-2375.806) * (-2381.302) [-2379.307] (-2385.928) (-2394.527) -- 0:02:51
Average standard deviation of split frequencies: 0.013139
676000 -- (-2377.079) (-2382.978) [-2370.651] (-2381.762) * [-2377.338] (-2376.946) (-2383.743) (-2387.053) -- 0:02:51
677000 -- (-2382.381) (-2374.735) (-2377.779) [-2374.008] * (-2376.711) [-2379.726] (-2372.924) (-2380.726) -- 0:02:50
678000 -- (-2383.972) [-2379.272] (-2371.970) (-2387.829) * (-2377.256) (-2386.833) [-2383.920] (-2383.559) -- 0:02:50
679000 -- [-2373.905] (-2388.426) (-2375.605) (-2383.324) * (-2384.269) (-2380.465) (-2385.918) [-2368.013] -- 0:02:49
680000 -- (-2389.487) (-2382.811) (-2383.783) [-2380.118] * (-2378.100) [-2375.283] (-2384.050) (-2379.454) -- 0:02:48
Average standard deviation of split frequencies: 0.013013
681000 -- (-2377.872) (-2393.290) [-2374.982] (-2376.330) * (-2385.651) (-2377.423) [-2377.730] (-2381.028) -- 0:02:48
682000 -- [-2378.923] (-2384.416) (-2382.797) (-2378.068) * (-2381.523) [-2372.975] (-2376.251) (-2387.384) -- 0:02:47
683000 -- (-2375.819) [-2380.953] (-2379.915) (-2382.724) * (-2381.523) [-2380.514] (-2383.484) (-2388.201) -- 0:02:47
684000 -- [-2376.332] (-2377.722) (-2375.568) (-2376.440) * (-2372.649) (-2382.851) (-2387.562) [-2387.309] -- 0:02:46
685000 -- (-2389.090) [-2384.215] (-2382.274) (-2385.803) * [-2376.957] (-2387.734) (-2385.565) (-2385.192) -- 0:02:46
Average standard deviation of split frequencies: 0.012876
686000 -- (-2379.507) (-2387.077) [-2382.316] (-2387.271) * (-2376.015) (-2386.052) (-2379.110) [-2376.288] -- 0:02:45
687000 -- (-2383.268) (-2379.276) (-2381.722) [-2381.458] * (-2377.433) [-2377.860] (-2373.716) (-2379.812) -- 0:02:45
688000 -- (-2384.585) (-2382.304) [-2383.025] (-2377.610) * (-2383.942) (-2387.802) (-2380.283) [-2378.007] -- 0:02:44
689000 -- [-2384.492] (-2378.680) (-2375.711) (-2384.596) * (-2385.518) (-2378.787) [-2380.358] (-2376.672) -- 0:02:44
690000 -- [-2382.379] (-2381.830) (-2383.119) (-2374.512) * (-2381.877) (-2375.011) [-2377.459] (-2373.580) -- 0:02:43
Average standard deviation of split frequencies: 0.012968
691000 -- (-2382.603) [-2384.716] (-2376.430) (-2374.927) * [-2375.439] (-2384.297) (-2378.413) (-2380.445) -- 0:02:43
692000 -- (-2401.774) [-2382.959] (-2389.146) (-2376.630) * (-2370.420) [-2374.151] (-2379.030) (-2375.496) -- 0:02:42
693000 -- (-2389.913) (-2373.275) (-2382.572) [-2377.185] * (-2388.151) [-2379.645] (-2387.607) (-2384.744) -- 0:02:42
694000 -- [-2383.263] (-2394.123) (-2385.114) (-2385.072) * [-2370.564] (-2373.179) (-2383.302) (-2381.374) -- 0:02:41
695000 -- (-2380.432) (-2383.878) [-2376.682] (-2382.161) * (-2380.739) (-2380.086) (-2382.822) [-2378.125] -- 0:02:41
Average standard deviation of split frequencies: 0.013653
696000 -- (-2379.697) (-2379.658) (-2378.476) [-2373.643] * (-2394.139) (-2386.712) (-2395.465) [-2375.848] -- 0:02:40
697000 -- (-2377.766) [-2380.607] (-2373.942) (-2375.652) * (-2376.745) (-2382.300) [-2374.384] (-2378.349) -- 0:02:39
698000 -- (-2375.541) (-2380.341) (-2394.659) [-2382.068] * (-2386.489) (-2374.027) (-2379.237) [-2375.542] -- 0:02:39
699000 -- (-2382.883) (-2383.005) (-2384.881) [-2378.612] * [-2382.197] (-2389.772) (-2373.140) (-2387.528) -- 0:02:38
700000 -- (-2378.749) (-2381.520) [-2373.319] (-2383.524) * (-2392.268) (-2386.524) (-2379.430) [-2378.570] -- 0:02:38
Average standard deviation of split frequencies: 0.013137
701000 -- [-2374.303] (-2379.853) (-2371.672) (-2381.013) * (-2388.747) [-2385.419] (-2391.841) (-2383.982) -- 0:02:37
702000 -- (-2378.042) (-2374.688) (-2381.555) [-2374.043] * (-2376.528) [-2380.861] (-2380.352) (-2386.350) -- 0:02:37
703000 -- (-2377.760) (-2384.970) (-2379.924) [-2373.037] * (-2377.750) (-2375.863) [-2377.792] (-2375.508) -- 0:02:36
704000 -- (-2382.397) (-2375.853) [-2375.997] (-2369.203) * (-2389.581) (-2371.493) [-2379.184] (-2378.171) -- 0:02:36
705000 -- (-2377.580) [-2379.990] (-2382.162) (-2371.871) * (-2384.313) (-2381.891) (-2381.999) [-2378.427] -- 0:02:35
Average standard deviation of split frequencies: 0.013249
706000 -- (-2381.449) [-2371.740] (-2384.178) (-2373.899) * (-2388.140) (-2372.831) (-2387.735) [-2376.443] -- 0:02:35
707000 -- (-2378.931) (-2374.771) (-2382.067) [-2379.104] * (-2382.286) (-2388.021) (-2388.199) [-2369.860] -- 0:02:34
708000 -- [-2376.326] (-2383.548) (-2387.506) (-2383.831) * (-2377.440) (-2380.715) (-2383.226) [-2376.275] -- 0:02:34
709000 -- [-2379.438] (-2379.108) (-2374.549) (-2386.081) * (-2370.053) (-2384.064) [-2386.840] (-2379.871) -- 0:02:33
710000 -- (-2386.927) (-2379.301) (-2382.040) [-2379.235] * [-2373.822] (-2384.810) (-2378.553) (-2372.865) -- 0:02:33
Average standard deviation of split frequencies: 0.013197
711000 -- (-2381.896) (-2383.825) (-2380.358) [-2379.948] * (-2376.292) (-2378.020) [-2382.696] (-2377.419) -- 0:02:32
712000 -- (-2378.131) [-2383.816] (-2386.338) (-2377.957) * (-2378.348) (-2370.320) (-2379.034) [-2375.374] -- 0:02:32
713000 -- (-2373.708) (-2379.864) (-2384.427) [-2379.776] * (-2378.968) [-2375.094] (-2375.197) (-2383.996) -- 0:02:31
714000 -- (-2378.739) (-2384.730) (-2385.819) [-2373.808] * (-2391.038) (-2377.451) (-2378.650) [-2381.838] -- 0:02:31
715000 -- (-2379.849) [-2381.890] (-2386.521) (-2373.673) * (-2390.253) (-2386.351) (-2377.784) [-2374.666] -- 0:02:30
Average standard deviation of split frequencies: 0.013272
716000 -- (-2378.145) (-2381.380) (-2392.082) [-2373.449] * (-2377.420) [-2380.584] (-2368.109) (-2386.301) -- 0:02:29
717000 -- (-2386.184) (-2374.474) (-2389.757) [-2379.553] * [-2377.851] (-2383.701) (-2374.796) (-2379.125) -- 0:02:29
718000 -- [-2382.720] (-2384.612) (-2398.275) (-2376.090) * [-2374.292] (-2385.801) (-2378.088) (-2378.472) -- 0:02:28
719000 -- [-2384.861] (-2385.762) (-2387.445) (-2380.025) * (-2392.866) (-2381.066) (-2388.022) [-2378.404] -- 0:02:28
720000 -- [-2382.656] (-2376.537) (-2381.311) (-2389.647) * (-2377.900) (-2375.538) (-2384.906) [-2372.685] -- 0:02:27
Average standard deviation of split frequencies: 0.013599
721000 -- (-2390.787) [-2379.809] (-2381.183) (-2371.840) * [-2374.233] (-2381.946) (-2398.584) (-2373.629) -- 0:02:27
722000 -- (-2382.299) (-2381.826) (-2388.842) [-2378.078] * (-2373.945) [-2371.672] (-2389.160) (-2385.235) -- 0:02:26
723000 -- (-2392.869) [-2379.668] (-2379.151) (-2379.832) * (-2381.899) (-2374.650) (-2381.795) [-2375.039] -- 0:02:26
724000 -- (-2376.228) (-2382.548) [-2378.524] (-2376.065) * (-2378.430) [-2374.154] (-2396.099) (-2374.489) -- 0:02:25
725000 -- (-2383.929) (-2379.250) (-2381.088) [-2376.013] * (-2387.962) [-2376.034] (-2386.265) (-2376.040) -- 0:02:25
Average standard deviation of split frequencies: 0.013704
726000 -- (-2386.653) [-2374.166] (-2384.626) (-2373.251) * (-2376.137) (-2378.751) (-2379.528) [-2380.811] -- 0:02:24
727000 -- (-2378.283) (-2375.393) [-2377.794] (-2380.708) * [-2384.092] (-2378.090) (-2377.650) (-2379.762) -- 0:02:24
728000 -- [-2379.744] (-2385.062) (-2387.452) (-2388.043) * (-2391.583) [-2381.582] (-2385.235) (-2378.348) -- 0:02:23
729000 -- [-2371.721] (-2385.411) (-2378.462) (-2370.683) * (-2370.219) [-2371.967] (-2376.616) (-2384.683) -- 0:02:23
730000 -- (-2376.838) (-2376.378) [-2381.215] (-2374.695) * (-2376.935) (-2377.292) (-2381.582) [-2376.690] -- 0:02:22
Average standard deviation of split frequencies: 0.013107
731000 -- [-2376.882] (-2374.749) (-2377.465) (-2372.586) * [-2385.358] (-2385.985) (-2382.431) (-2382.169) -- 0:02:22
732000 -- (-2392.328) (-2384.155) (-2382.787) [-2371.870] * (-2387.098) [-2377.166] (-2386.834) (-2384.685) -- 0:02:21
733000 -- (-2387.083) (-2387.515) (-2389.852) [-2373.634] * (-2388.050) (-2377.449) (-2390.647) [-2376.560] -- 0:02:20
734000 -- [-2377.091] (-2389.219) (-2375.881) (-2384.197) * (-2378.051) [-2383.831] (-2375.588) (-2377.568) -- 0:02:20
735000 -- (-2379.655) [-2369.976] (-2390.348) (-2388.408) * (-2373.433) (-2385.663) [-2374.816] (-2380.256) -- 0:02:19
Average standard deviation of split frequencies: 0.013181
736000 -- (-2393.962) (-2382.345) [-2386.322] (-2384.480) * (-2381.464) (-2378.783) (-2391.586) [-2375.602] -- 0:02:19
737000 -- (-2375.286) [-2380.336] (-2374.337) (-2391.037) * [-2372.078] (-2390.249) (-2379.920) (-2381.982) -- 0:02:18
738000 -- [-2380.945] (-2370.974) (-2382.771) (-2382.046) * [-2377.309] (-2378.590) (-2381.581) (-2380.616) -- 0:02:18
739000 -- (-2375.888) [-2374.585] (-2386.503) (-2396.526) * [-2378.324] (-2391.151) (-2387.436) (-2375.635) -- 0:02:17
740000 -- (-2386.159) [-2372.840] (-2370.904) (-2383.378) * (-2391.771) [-2379.265] (-2380.033) (-2377.771) -- 0:02:17
Average standard deviation of split frequencies: 0.012964
741000 -- (-2374.180) (-2380.017) [-2375.818] (-2383.827) * (-2372.599) (-2385.052) [-2383.243] (-2375.237) -- 0:02:16
742000 -- [-2376.001] (-2382.526) (-2374.081) (-2374.864) * (-2388.030) (-2387.817) [-2371.230] (-2387.994) -- 0:02:16
743000 -- (-2378.895) (-2381.129) (-2381.273) [-2374.092] * (-2394.523) (-2387.209) [-2381.178] (-2376.724) -- 0:02:15
744000 -- [-2376.179] (-2383.169) (-2381.705) (-2376.569) * (-2384.499) (-2377.496) [-2376.779] (-2381.027) -- 0:02:15
745000 -- (-2386.147) [-2367.968] (-2390.837) (-2382.790) * (-2376.768) (-2379.083) [-2380.423] (-2386.202) -- 0:02:14
Average standard deviation of split frequencies: 0.012605
746000 -- (-2380.263) (-2379.499) [-2381.395] (-2382.441) * (-2377.136) (-2384.385) [-2378.424] (-2379.823) -- 0:02:14
747000 -- (-2385.416) (-2386.305) [-2382.694] (-2383.796) * (-2373.719) (-2392.894) [-2377.668] (-2380.757) -- 0:02:13
748000 -- (-2377.318) (-2383.938) (-2389.540) [-2375.109] * [-2378.782] (-2391.663) (-2377.929) (-2378.379) -- 0:02:13
749000 -- [-2377.895] (-2381.051) (-2377.724) (-2385.737) * (-2378.010) (-2400.500) [-2376.417] (-2387.153) -- 0:02:12
750000 -- (-2376.999) [-2375.657] (-2390.068) (-2383.920) * (-2379.862) (-2380.050) (-2375.788) [-2379.165] -- 0:02:12
Average standard deviation of split frequencies: 0.012923
751000 -- (-2379.356) (-2387.369) (-2381.266) [-2380.564] * (-2385.887) (-2393.042) (-2376.386) [-2377.698] -- 0:02:11
752000 -- (-2372.661) (-2380.391) (-2374.696) [-2377.762] * (-2379.178) [-2385.693] (-2395.117) (-2377.064) -- 0:02:10
753000 -- (-2385.761) (-2376.349) (-2380.050) [-2379.018] * (-2372.122) (-2390.421) (-2377.549) [-2390.924] -- 0:02:10
754000 -- [-2374.986] (-2379.456) (-2374.966) (-2385.381) * (-2388.089) [-2374.767] (-2380.595) (-2375.884) -- 0:02:09
755000 -- [-2374.197] (-2389.618) (-2387.255) (-2377.790) * (-2385.949) [-2375.088] (-2388.606) (-2374.870) -- 0:02:09
Average standard deviation of split frequencies: 0.012865
756000 -- (-2384.490) (-2382.588) (-2378.369) [-2382.981] * (-2385.740) [-2384.137] (-2374.732) (-2382.231) -- 0:02:08
757000 -- [-2371.687] (-2384.888) (-2377.911) (-2386.352) * [-2375.431] (-2377.777) (-2380.788) (-2376.901) -- 0:02:08
758000 -- (-2380.441) (-2383.638) (-2382.421) [-2382.831] * [-2381.431] (-2393.395) (-2384.040) (-2384.548) -- 0:02:07
759000 -- (-2382.373) (-2380.956) [-2376.831] (-2379.841) * (-2374.303) (-2384.670) [-2375.980] (-2387.599) -- 0:02:07
760000 -- (-2376.412) [-2375.625] (-2381.542) (-2386.033) * (-2374.361) (-2381.946) [-2374.176] (-2376.366) -- 0:02:06
Average standard deviation of split frequencies: 0.012590
761000 -- (-2375.803) [-2378.192] (-2381.201) (-2381.318) * [-2369.715] (-2383.444) (-2381.339) (-2383.932) -- 0:02:06
762000 -- (-2384.488) [-2377.692] (-2381.194) (-2374.681) * [-2381.674] (-2379.634) (-2376.255) (-2382.420) -- 0:02:05
763000 -- [-2380.782] (-2380.570) (-2378.069) (-2380.401) * (-2382.642) (-2391.358) [-2375.564] (-2371.886) -- 0:02:05
764000 -- (-2372.576) [-2375.133] (-2377.102) (-2374.161) * [-2395.065] (-2377.406) (-2376.752) (-2376.052) -- 0:02:04
765000 -- (-2380.710) (-2395.841) (-2371.628) [-2371.995] * [-2376.150] (-2375.009) (-2373.001) (-2383.912) -- 0:02:04
Average standard deviation of split frequencies: 0.013215
766000 -- (-2377.309) [-2380.854] (-2374.551) (-2381.386) * (-2376.543) [-2374.401] (-2375.560) (-2381.569) -- 0:02:03
767000 -- (-2375.408) [-2375.963] (-2374.998) (-2372.924) * [-2375.828] (-2381.564) (-2384.451) (-2383.307) -- 0:02:03
768000 -- (-2377.431) (-2379.518) [-2384.246] (-2382.181) * (-2380.381) (-2375.533) [-2384.265] (-2381.270) -- 0:02:02
769000 -- (-2380.609) (-2392.754) [-2379.058] (-2377.047) * (-2382.686) (-2383.555) [-2374.163] (-2377.752) -- 0:02:01
770000 -- [-2379.104] (-2397.962) (-2383.554) (-2380.468) * (-2384.374) (-2375.778) [-2386.055] (-2375.241) -- 0:02:01
Average standard deviation of split frequencies: 0.013457
771000 -- [-2377.775] (-2384.619) (-2376.167) (-2392.290) * (-2374.106) (-2382.326) [-2387.932] (-2378.597) -- 0:02:00
772000 -- (-2377.407) [-2382.046] (-2385.299) (-2381.393) * (-2373.506) (-2385.858) [-2382.696] (-2383.759) -- 0:02:00
773000 -- (-2386.252) (-2379.523) (-2378.148) [-2379.152] * (-2374.362) [-2377.999] (-2392.520) (-2380.562) -- 0:01:59
774000 -- (-2381.154) (-2379.693) (-2384.211) [-2386.220] * (-2373.611) (-2374.012) [-2383.584] (-2384.842) -- 0:01:59
775000 -- (-2388.334) (-2382.406) [-2379.110] (-2375.286) * (-2380.848) [-2373.687] (-2377.457) (-2379.118) -- 0:01:58
Average standard deviation of split frequencies: 0.013173
776000 -- (-2381.608) (-2394.284) [-2379.834] (-2375.519) * [-2370.923] (-2377.164) (-2372.299) (-2376.789) -- 0:01:58
777000 -- (-2387.381) (-2371.895) [-2376.338] (-2384.035) * (-2378.813) (-2378.985) (-2389.063) [-2374.857] -- 0:01:57
778000 -- [-2374.048] (-2381.007) (-2389.183) (-2374.399) * (-2381.015) (-2376.632) [-2377.271] (-2384.176) -- 0:01:57
779000 -- (-2372.833) [-2378.651] (-2382.455) (-2384.330) * (-2380.264) [-2372.040] (-2387.553) (-2378.161) -- 0:01:56
780000 -- (-2387.455) [-2369.898] (-2383.632) (-2387.841) * (-2383.492) (-2375.739) (-2376.359) [-2380.420] -- 0:01:56
Average standard deviation of split frequencies: 0.012458
781000 -- (-2378.583) [-2392.467] (-2377.156) (-2379.363) * (-2384.360) [-2381.040] (-2393.819) (-2374.427) -- 0:01:55
782000 -- (-2369.764) [-2379.791] (-2394.574) (-2382.450) * (-2381.296) [-2377.807] (-2376.273) (-2381.956) -- 0:01:55
783000 -- (-2380.963) (-2381.760) (-2375.103) [-2377.605] * (-2386.032) [-2375.739] (-2385.236) (-2378.349) -- 0:01:54
784000 -- (-2386.632) (-2385.033) [-2378.929] (-2385.436) * (-2382.409) (-2387.161) [-2380.183] (-2375.896) -- 0:01:54
785000 -- (-2386.946) (-2370.879) [-2374.342] (-2372.896) * (-2377.166) (-2380.972) [-2381.121] (-2376.191) -- 0:01:53
Average standard deviation of split frequencies: 0.012279
786000 -- (-2386.527) [-2375.390] (-2387.116) (-2378.458) * (-2387.664) (-2377.736) [-2376.495] (-2389.839) -- 0:01:52
787000 -- (-2371.753) (-2394.179) (-2377.311) [-2378.064] * [-2385.883] (-2384.655) (-2375.304) (-2385.049) -- 0:01:52
788000 -- [-2381.488] (-2379.481) (-2385.948) (-2386.139) * [-2390.091] (-2386.588) (-2382.114) (-2398.293) -- 0:01:51
789000 -- (-2382.097) (-2376.390) (-2385.029) [-2372.329] * [-2379.401] (-2376.003) (-2381.157) (-2379.170) -- 0:01:51
790000 -- (-2383.891) [-2377.858] (-2385.229) (-2374.173) * (-2377.462) (-2388.322) [-2378.583] (-2377.176) -- 0:01:50
Average standard deviation of split frequencies: 0.012395
791000 -- [-2383.036] (-2374.129) (-2388.529) (-2381.795) * (-2387.259) [-2381.085] (-2387.231) (-2371.294) -- 0:01:50
792000 -- (-2371.210) (-2379.723) [-2384.733] (-2383.026) * (-2382.724) (-2385.277) (-2373.811) [-2376.532] -- 0:01:49
793000 -- [-2371.911] (-2380.636) (-2385.568) (-2377.682) * (-2384.593) (-2390.123) (-2378.849) [-2378.419] -- 0:01:49
794000 -- (-2387.252) (-2378.004) [-2375.033] (-2384.610) * [-2383.534] (-2379.495) (-2377.378) (-2381.768) -- 0:01:48
795000 -- (-2382.012) (-2389.464) (-2380.991) [-2381.876] * (-2376.416) (-2375.815) [-2381.559] (-2381.478) -- 0:01:48
Average standard deviation of split frequencies: 0.012499
796000 -- (-2379.334) (-2379.449) (-2389.682) [-2376.334] * (-2387.737) [-2378.956] (-2371.210) (-2379.045) -- 0:01:47
797000 -- (-2377.725) (-2378.786) [-2377.342] (-2386.932) * (-2382.574) [-2373.571] (-2381.123) (-2383.331) -- 0:01:47
798000 -- (-2378.699) [-2378.962] (-2379.114) (-2379.196) * (-2377.603) (-2384.204) (-2381.010) [-2381.441] -- 0:01:46
799000 -- (-2370.566) (-2374.911) [-2383.808] (-2381.352) * (-2376.316) [-2379.115] (-2386.683) (-2373.711) -- 0:01:46
800000 -- (-2385.781) (-2380.094) [-2390.361] (-2379.103) * (-2370.601) (-2375.355) (-2379.693) [-2385.738] -- 0:01:45
Average standard deviation of split frequencies: 0.012550
801000 -- (-2379.107) (-2383.991) [-2376.089] (-2390.509) * (-2383.459) (-2377.971) (-2383.633) [-2371.597] -- 0:01:45
802000 -- (-2381.858) [-2372.530] (-2376.668) (-2385.594) * [-2385.506] (-2378.432) (-2379.505) (-2380.286) -- 0:01:44
803000 -- (-2384.873) (-2374.505) (-2382.898) [-2387.410] * (-2388.726) (-2381.929) [-2375.650] (-2382.343) -- 0:01:44
804000 -- [-2375.124] (-2384.089) (-2383.918) (-2380.046) * (-2384.713) (-2385.218) (-2375.622) [-2378.019] -- 0:01:43
805000 -- [-2378.606] (-2382.995) (-2396.613) (-2384.447) * (-2400.283) (-2378.046) [-2373.404] (-2380.912) -- 0:01:42
Average standard deviation of split frequencies: 0.012344
806000 -- (-2371.009) (-2375.340) (-2371.558) [-2384.329] * (-2372.768) [-2387.487] (-2370.090) (-2374.200) -- 0:01:42
807000 -- (-2380.981) [-2373.406] (-2386.522) (-2387.101) * (-2375.836) (-2392.107) [-2373.026] (-2377.782) -- 0:01:41
808000 -- (-2382.015) (-2379.907) [-2383.721] (-2386.578) * (-2387.588) [-2388.774] (-2381.679) (-2384.655) -- 0:01:41
809000 -- (-2382.529) (-2375.274) [-2385.173] (-2373.543) * (-2392.451) (-2383.249) (-2382.456) [-2376.941] -- 0:01:40
810000 -- (-2381.756) [-2374.376] (-2392.912) (-2378.919) * (-2380.131) (-2389.340) (-2384.678) [-2375.322] -- 0:01:40
Average standard deviation of split frequencies: 0.012426
811000 -- [-2380.050] (-2375.378) (-2372.908) (-2374.966) * (-2381.563) (-2390.021) (-2379.017) [-2381.941] -- 0:01:39
812000 -- [-2388.256] (-2383.729) (-2385.932) (-2378.462) * (-2386.029) [-2378.779] (-2380.471) (-2380.425) -- 0:01:39
813000 -- (-2377.350) (-2381.549) [-2377.055] (-2372.631) * (-2374.578) [-2378.872] (-2375.636) (-2375.755) -- 0:01:38
814000 -- (-2375.424) [-2382.313] (-2377.279) (-2384.851) * (-2382.985) (-2378.478) (-2384.764) [-2368.751] -- 0:01:38
815000 -- (-2385.241) (-2379.957) [-2386.868] (-2396.780) * (-2377.447) (-2377.745) [-2375.230] (-2379.107) -- 0:01:37
Average standard deviation of split frequencies: 0.012132
816000 -- (-2382.393) (-2387.192) [-2381.408] (-2377.170) * [-2384.629] (-2380.833) (-2384.570) (-2389.964) -- 0:01:37
817000 -- (-2382.712) (-2387.027) (-2376.636) [-2374.203] * (-2376.748) (-2386.049) [-2375.769] (-2380.010) -- 0:01:36
818000 -- (-2383.203) [-2384.964] (-2378.524) (-2387.319) * (-2383.424) [-2377.101] (-2381.806) (-2383.478) -- 0:01:36
819000 -- (-2385.447) [-2375.026] (-2382.039) (-2378.424) * (-2382.258) [-2373.934] (-2390.873) (-2379.470) -- 0:01:35
820000 -- (-2389.859) (-2384.410) [-2384.269] (-2384.239) * (-2384.928) (-2379.623) [-2373.426] (-2383.562) -- 0:01:35
Average standard deviation of split frequencies: 0.011851
821000 -- [-2382.298] (-2389.940) (-2377.566) (-2376.271) * [-2379.062] (-2373.020) (-2380.813) (-2373.763) -- 0:01:34
822000 -- (-2394.698) [-2378.570] (-2369.670) (-2386.715) * (-2386.108) (-2378.311) [-2373.389] (-2388.414) -- 0:01:33
823000 -- (-2383.503) (-2369.316) (-2383.595) [-2382.909] * (-2378.422) (-2383.918) [-2376.109] (-2382.896) -- 0:01:33
824000 -- (-2389.628) (-2386.161) (-2379.605) [-2378.881] * (-2381.616) (-2389.009) [-2376.724] (-2371.336) -- 0:01:32
825000 -- [-2376.323] (-2371.796) (-2379.401) (-2382.579) * [-2381.345] (-2379.375) (-2383.678) (-2392.111) -- 0:01:32
Average standard deviation of split frequencies: 0.011805
826000 -- (-2381.319) (-2375.377) [-2371.155] (-2381.099) * (-2375.107) (-2391.267) [-2382.540] (-2390.444) -- 0:01:31
827000 -- (-2379.786) (-2389.391) [-2374.152] (-2382.215) * [-2378.590] (-2379.402) (-2377.412) (-2385.293) -- 0:01:31
828000 -- [-2378.295] (-2390.256) (-2378.489) (-2380.341) * (-2382.959) (-2387.239) (-2379.890) [-2376.525] -- 0:01:30
829000 -- (-2380.967) [-2375.284] (-2377.291) (-2374.408) * (-2374.434) [-2373.816] (-2375.970) (-2378.763) -- 0:01:30
830000 -- (-2376.846) [-2377.208] (-2370.301) (-2380.323) * (-2377.896) (-2377.851) (-2378.180) [-2375.687] -- 0:01:29
Average standard deviation of split frequencies: 0.011858
831000 -- (-2375.480) (-2379.010) (-2378.093) [-2382.547] * (-2381.143) (-2389.296) (-2379.921) [-2383.654] -- 0:01:29
832000 -- (-2377.531) [-2377.194] (-2389.270) (-2382.145) * (-2382.639) (-2380.525) [-2379.485] (-2385.850) -- 0:01:28
833000 -- [-2376.700] (-2377.842) (-2384.486) (-2378.991) * (-2373.296) [-2369.684] (-2376.244) (-2390.423) -- 0:01:28
834000 -- (-2380.803) (-2382.365) [-2373.222] (-2383.312) * (-2377.213) (-2384.390) (-2386.155) [-2385.217] -- 0:01:27
835000 -- (-2390.048) (-2386.467) (-2396.858) [-2374.865] * (-2372.512) (-2386.089) (-2376.917) [-2376.241] -- 0:01:27
Average standard deviation of split frequencies: 0.012049
836000 -- (-2387.539) (-2376.400) (-2378.624) [-2379.090] * (-2383.014) [-2377.770] (-2383.021) (-2386.732) -- 0:01:26
837000 -- (-2395.502) (-2395.322) [-2377.227] (-2385.278) * (-2384.501) (-2366.729) (-2380.460) [-2377.368] -- 0:01:26
838000 -- (-2375.102) (-2376.256) (-2379.067) [-2376.394] * (-2372.297) [-2386.493] (-2381.028) (-2380.100) -- 0:01:25
839000 -- (-2382.911) [-2374.272] (-2372.721) (-2383.065) * [-2375.096] (-2375.413) (-2381.949) (-2377.819) -- 0:01:25
840000 -- (-2390.482) [-2384.246] (-2375.337) (-2380.324) * (-2375.586) (-2397.033) (-2383.287) [-2373.148] -- 0:01:24
Average standard deviation of split frequencies: 0.012071
841000 -- (-2380.159) (-2385.888) [-2373.094] (-2384.872) * (-2385.617) (-2392.876) [-2383.602] (-2393.196) -- 0:01:23
842000 -- (-2379.355) (-2384.414) [-2368.540] (-2386.353) * [-2386.832] (-2395.161) (-2390.809) (-2380.974) -- 0:01:23
843000 -- (-2398.566) [-2374.247] (-2379.266) (-2385.517) * (-2378.286) [-2376.531] (-2383.777) (-2385.084) -- 0:01:22
844000 -- (-2388.391) (-2383.892) [-2379.503] (-2382.128) * (-2383.286) [-2380.743] (-2382.240) (-2384.554) -- 0:01:22
845000 -- (-2383.329) [-2382.439] (-2395.375) (-2383.475) * (-2386.113) (-2383.783) [-2376.656] (-2377.834) -- 0:01:21
Average standard deviation of split frequencies: 0.011819
846000 -- (-2373.761) (-2379.777) (-2394.477) [-2377.800] * (-2388.768) (-2374.555) (-2383.458) [-2377.409] -- 0:01:21
847000 -- (-2383.744) (-2379.877) [-2374.105] (-2378.096) * (-2378.724) (-2382.041) (-2380.495) [-2371.297] -- 0:01:20
848000 -- (-2375.112) (-2383.444) [-2380.566] (-2375.832) * (-2385.088) (-2376.180) (-2386.833) [-2371.420] -- 0:01:20
849000 -- (-2380.751) [-2373.084] (-2377.109) (-2384.933) * [-2379.630] (-2373.610) (-2385.206) (-2384.598) -- 0:01:19
850000 -- [-2384.116] (-2372.883) (-2386.612) (-2392.715) * (-2379.005) [-2386.397] (-2393.738) (-2377.486) -- 0:01:19
Average standard deviation of split frequencies: 0.011958
851000 -- [-2373.850] (-2383.221) (-2385.640) (-2381.802) * (-2387.925) [-2378.058] (-2379.479) (-2377.675) -- 0:01:18
852000 -- (-2384.898) (-2384.301) (-2382.348) [-2374.820] * (-2384.133) (-2374.043) [-2376.443] (-2398.029) -- 0:01:18
853000 -- [-2373.174] (-2376.223) (-2391.984) (-2380.457) * (-2374.892) [-2374.477] (-2391.781) (-2379.028) -- 0:01:17
854000 -- [-2377.017] (-2383.447) (-2376.883) (-2373.599) * (-2376.508) [-2377.448] (-2378.253) (-2390.813) -- 0:01:17
855000 -- [-2384.544] (-2382.162) (-2380.902) (-2384.172) * [-2378.062] (-2379.503) (-2381.109) (-2374.057) -- 0:01:16
Average standard deviation of split frequencies: 0.012116
856000 -- (-2382.450) (-2379.254) (-2377.855) [-2376.322] * (-2389.892) (-2386.785) (-2383.234) [-2379.413] -- 0:01:16
857000 -- [-2376.516] (-2382.875) (-2379.441) (-2382.280) * (-2394.586) (-2382.659) [-2381.854] (-2374.989) -- 0:01:15
858000 -- [-2368.688] (-2379.843) (-2378.276) (-2382.977) * [-2379.667] (-2388.471) (-2384.658) (-2388.471) -- 0:01:14
859000 -- [-2375.936] (-2385.397) (-2381.498) (-2376.558) * (-2380.651) (-2375.437) [-2377.819] (-2392.842) -- 0:01:14
860000 -- (-2382.948) (-2379.706) [-2374.852] (-2378.290) * (-2385.171) (-2379.043) [-2377.004] (-2387.472) -- 0:01:13
Average standard deviation of split frequencies: 0.011646
861000 -- [-2380.657] (-2376.039) (-2377.896) (-2380.574) * (-2380.535) (-2380.947) [-2373.182] (-2384.978) -- 0:01:13
862000 -- [-2373.779] (-2384.578) (-2386.714) (-2387.851) * (-2380.066) [-2382.773] (-2376.077) (-2383.661) -- 0:01:12
863000 -- [-2376.048] (-2380.482) (-2374.631) (-2379.580) * (-2371.909) (-2386.593) [-2375.718] (-2375.743) -- 0:01:12
864000 -- [-2374.580] (-2390.236) (-2376.141) (-2389.998) * (-2381.827) (-2377.667) (-2382.097) [-2382.431] -- 0:01:11
865000 -- (-2373.016) [-2375.611] (-2389.066) (-2387.163) * (-2379.646) (-2381.643) [-2373.897] (-2399.886) -- 0:01:11
Average standard deviation of split frequencies: 0.011202
866000 -- (-2383.048) (-2381.683) (-2383.961) [-2382.454] * (-2379.901) [-2376.040] (-2378.779) (-2385.472) -- 0:01:10
867000 -- (-2382.939) (-2370.432) [-2384.484] (-2379.754) * (-2381.188) (-2375.902) (-2391.006) [-2375.280] -- 0:01:10
868000 -- (-2381.584) (-2377.282) (-2383.968) [-2381.639] * (-2388.913) [-2376.407] (-2376.045) (-2377.494) -- 0:01:09
869000 -- [-2378.144] (-2386.937) (-2376.037) (-2382.129) * (-2382.318) (-2381.611) (-2377.092) [-2372.150] -- 0:01:09
870000 -- [-2374.342] (-2379.500) (-2387.426) (-2390.623) * (-2380.380) (-2390.462) (-2375.360) [-2374.057] -- 0:01:08
Average standard deviation of split frequencies: 0.010857
871000 -- [-2379.203] (-2378.825) (-2379.961) (-2396.662) * (-2374.255) (-2377.310) [-2376.180] (-2387.928) -- 0:01:08
872000 -- (-2385.417) [-2373.679] (-2382.001) (-2386.555) * (-2380.383) (-2375.308) [-2370.788] (-2382.495) -- 0:01:07
873000 -- (-2397.488) [-2386.142] (-2381.874) (-2384.037) * (-2375.936) (-2379.776) (-2387.494) [-2369.909] -- 0:01:07
874000 -- [-2379.006] (-2390.396) (-2389.490) (-2384.670) * (-2375.292) (-2382.564) (-2390.783) [-2375.542] -- 0:01:06
875000 -- (-2374.665) (-2380.416) [-2382.425] (-2385.533) * (-2392.220) (-2381.210) [-2376.848] (-2387.487) -- 0:01:06
Average standard deviation of split frequencies: 0.010819
876000 -- (-2376.629) [-2381.012] (-2394.297) (-2377.230) * (-2377.475) (-2385.961) (-2386.845) [-2378.622] -- 0:01:05
877000 -- (-2377.745) [-2376.062] (-2396.079) (-2380.226) * [-2387.001] (-2387.383) (-2380.496) (-2375.391) -- 0:01:04
878000 -- (-2384.155) [-2377.471] (-2393.839) (-2381.295) * (-2387.397) [-2375.251] (-2371.829) (-2377.740) -- 0:01:04
879000 -- (-2379.531) (-2383.607) (-2391.007) [-2381.436] * [-2380.717] (-2384.717) (-2382.254) (-2384.618) -- 0:01:03
880000 -- (-2378.244) [-2376.554] (-2379.701) (-2380.298) * (-2384.586) (-2383.418) [-2384.904] (-2375.464) -- 0:01:03
Average standard deviation of split frequencies: 0.010706
881000 -- [-2382.746] (-2381.821) (-2372.980) (-2376.400) * (-2375.034) (-2383.719) (-2375.553) [-2375.409] -- 0:01:02
882000 -- (-2372.537) [-2375.147] (-2387.198) (-2376.395) * (-2388.827) [-2379.132] (-2385.162) (-2384.672) -- 0:01:02
883000 -- (-2382.013) (-2378.128) (-2371.016) [-2376.904] * [-2380.454] (-2388.475) (-2374.004) (-2379.720) -- 0:01:01
884000 -- (-2381.235) (-2372.278) (-2384.255) [-2373.859] * (-2378.609) (-2385.423) [-2379.068] (-2385.637) -- 0:01:01
885000 -- (-2391.909) [-2376.058] (-2393.938) (-2372.909) * (-2376.566) (-2379.795) [-2373.689] (-2374.024) -- 0:01:00
Average standard deviation of split frequencies: 0.010361
886000 -- (-2391.259) [-2375.804] (-2373.977) (-2377.845) * (-2397.489) [-2377.928] (-2382.230) (-2379.881) -- 0:01:00
887000 -- [-2376.474] (-2380.090) (-2387.980) (-2381.500) * [-2381.892] (-2366.215) (-2376.612) (-2382.837) -- 0:00:59
888000 -- (-2388.076) (-2376.775) [-2377.046] (-2384.092) * (-2380.426) (-2380.143) (-2380.649) [-2376.863] -- 0:00:59
889000 -- (-2381.290) (-2390.515) (-2379.144) [-2376.833] * (-2372.710) [-2384.241] (-2383.817) (-2375.784) -- 0:00:58
890000 -- (-2387.106) (-2381.651) (-2372.544) [-2387.823] * [-2380.377] (-2380.525) (-2386.716) (-2379.112) -- 0:00:58
Average standard deviation of split frequencies: 0.010446
891000 -- (-2378.216) (-2377.034) (-2381.009) [-2375.576] * (-2377.391) [-2370.361] (-2381.225) (-2387.685) -- 0:00:57
892000 -- (-2384.682) (-2383.231) (-2381.082) [-2378.796] * (-2375.022) (-2378.362) [-2375.622] (-2376.985) -- 0:00:57
893000 -- [-2381.005] (-2385.645) (-2376.085) (-2382.791) * (-2380.521) (-2380.181) (-2382.615) [-2377.949] -- 0:00:56
894000 -- (-2383.684) (-2387.567) (-2379.014) [-2373.191] * (-2381.986) (-2383.314) (-2377.331) [-2375.827] -- 0:00:55
895000 -- [-2386.171] (-2378.987) (-2380.513) (-2379.613) * (-2386.036) (-2386.240) (-2392.530) [-2386.616] -- 0:00:55
Average standard deviation of split frequencies: 0.010329
896000 -- [-2380.794] (-2387.522) (-2379.216) (-2382.992) * (-2376.143) (-2376.074) (-2386.929) [-2382.291] -- 0:00:54
897000 -- (-2381.242) (-2383.750) (-2381.127) [-2382.201] * (-2380.263) [-2386.597] (-2377.382) (-2397.204) -- 0:00:54
898000 -- [-2379.295] (-2377.960) (-2378.275) (-2379.078) * (-2377.225) [-2375.945] (-2380.943) (-2378.621) -- 0:00:53
899000 -- [-2380.925] (-2380.378) (-2378.031) (-2377.247) * (-2377.845) (-2382.801) (-2376.344) [-2374.878] -- 0:00:53
900000 -- (-2381.096) (-2376.250) [-2374.256] (-2375.782) * (-2379.776) (-2383.428) (-2384.855) [-2379.313] -- 0:00:52
Average standard deviation of split frequencies: 0.010495
901000 -- (-2383.048) (-2378.052) (-2384.973) [-2377.094] * (-2398.538) (-2376.721) (-2392.866) [-2373.462] -- 0:00:52
902000 -- (-2382.315) (-2382.586) [-2378.653] (-2383.306) * (-2390.382) (-2376.125) (-2383.240) [-2381.799] -- 0:00:51
903000 -- (-2376.092) [-2380.876] (-2382.265) (-2377.022) * (-2388.048) [-2375.250] (-2387.613) (-2379.526) -- 0:00:51
904000 -- (-2378.160) (-2383.300) (-2383.135) [-2377.505] * (-2386.309) [-2383.462] (-2383.323) (-2377.802) -- 0:00:50
905000 -- [-2372.146] (-2384.092) (-2381.619) (-2382.572) * [-2382.777] (-2383.538) (-2370.523) (-2386.063) -- 0:00:50
Average standard deviation of split frequencies: 0.010762
906000 -- (-2386.130) (-2382.434) [-2384.466] (-2381.254) * (-2385.960) (-2386.677) [-2380.399] (-2380.376) -- 0:00:49
907000 -- (-2386.447) (-2376.387) [-2380.562] (-2390.197) * (-2380.788) (-2385.336) (-2384.735) [-2375.591] -- 0:00:49
908000 -- (-2379.680) (-2380.185) [-2380.007] (-2378.003) * (-2379.946) [-2377.882] (-2386.932) (-2387.333) -- 0:00:48
909000 -- [-2378.147] (-2373.256) (-2399.845) (-2377.475) * (-2385.820) [-2372.879] (-2386.821) (-2378.831) -- 0:00:48
910000 -- (-2379.560) [-2377.011] (-2383.525) (-2386.062) * [-2376.194] (-2380.007) (-2381.705) (-2376.411) -- 0:00:47
Average standard deviation of split frequencies: 0.011388
911000 -- [-2378.952] (-2375.884) (-2375.909) (-2384.945) * (-2378.938) (-2383.564) [-2382.410] (-2386.181) -- 0:00:46
912000 -- [-2373.135] (-2386.971) (-2378.009) (-2382.840) * (-2377.874) (-2380.303) (-2373.719) [-2393.813] -- 0:00:46
913000 -- (-2382.679) (-2377.497) (-2374.627) [-2376.066] * (-2382.156) [-2377.337] (-2378.529) (-2381.865) -- 0:00:45
914000 -- (-2375.443) (-2377.260) (-2383.111) [-2371.013] * (-2378.975) [-2379.772] (-2380.795) (-2384.718) -- 0:00:45
915000 -- (-2385.700) (-2383.097) [-2383.556] (-2381.603) * (-2377.648) (-2380.206) (-2378.745) [-2384.318] -- 0:00:44
Average standard deviation of split frequencies: 0.011403
916000 -- (-2376.021) [-2375.865] (-2381.017) (-2381.905) * (-2373.606) (-2385.240) (-2383.242) [-2380.549] -- 0:00:44
917000 -- [-2378.400] (-2377.358) (-2372.708) (-2379.287) * (-2380.983) [-2375.254] (-2373.455) (-2380.072) -- 0:00:43
918000 -- [-2372.496] (-2378.043) (-2378.880) (-2386.319) * (-2388.637) [-2375.801] (-2382.556) (-2388.919) -- 0:00:43
919000 -- (-2377.613) [-2378.279] (-2386.468) (-2377.784) * (-2380.263) (-2382.203) (-2370.348) [-2380.985] -- 0:00:42
920000 -- (-2387.555) (-2378.748) (-2381.951) [-2376.827] * [-2379.818] (-2380.701) (-2378.143) (-2376.537) -- 0:00:42
Average standard deviation of split frequencies: 0.011211
921000 -- (-2384.542) (-2378.223) (-2387.899) [-2383.518] * (-2385.799) (-2383.336) (-2381.822) [-2378.004] -- 0:00:41
922000 -- (-2376.610) (-2393.183) [-2389.296] (-2379.241) * (-2378.023) (-2381.914) (-2375.254) [-2380.068] -- 0:00:41
923000 -- (-2381.761) (-2383.778) [-2377.896] (-2377.872) * (-2384.618) [-2373.859] (-2385.106) (-2392.301) -- 0:00:40
924000 -- [-2378.457] (-2374.048) (-2371.342) (-2392.551) * (-2379.233) [-2378.760] (-2375.735) (-2384.018) -- 0:00:40
925000 -- (-2388.669) [-2390.615] (-2380.909) (-2378.499) * (-2385.232) (-2382.986) (-2376.667) [-2381.537] -- 0:00:39
Average standard deviation of split frequencies: 0.011146
926000 -- [-2379.859] (-2374.723) (-2377.248) (-2375.473) * (-2383.539) [-2377.705] (-2376.877) (-2385.554) -- 0:00:39
927000 -- [-2382.586] (-2381.042) (-2372.871) (-2381.291) * (-2386.871) (-2382.744) (-2385.439) [-2380.393] -- 0:00:38
928000 -- (-2388.672) (-2386.134) [-2372.486] (-2384.451) * (-2381.202) (-2380.193) [-2387.535] (-2376.421) -- 0:00:38
929000 -- [-2383.789] (-2385.554) (-2380.865) (-2380.610) * [-2380.272] (-2386.803) (-2380.104) (-2376.412) -- 0:00:37
930000 -- [-2381.463] (-2386.082) (-2383.045) (-2382.056) * (-2376.797) (-2376.582) (-2379.491) [-2369.116] -- 0:00:36
Average standard deviation of split frequencies: 0.011330
931000 -- (-2378.918) (-2379.317) (-2376.129) [-2378.837] * [-2377.370] (-2376.269) (-2379.248) (-2375.831) -- 0:00:36
932000 -- (-2381.250) (-2382.811) (-2371.961) [-2379.583] * (-2377.343) (-2385.062) [-2381.860] (-2383.383) -- 0:00:35
933000 -- (-2381.726) [-2382.573] (-2374.498) (-2387.565) * (-2383.998) (-2382.879) (-2380.853) [-2385.055] -- 0:00:35
934000 -- (-2370.723) (-2386.217) [-2376.957] (-2377.309) * (-2386.805) (-2374.479) (-2392.225) [-2377.173] -- 0:00:34
935000 -- (-2383.981) (-2382.652) [-2383.807] (-2375.185) * [-2368.005] (-2377.355) (-2385.228) (-2383.509) -- 0:00:34
Average standard deviation of split frequencies: 0.011478
936000 -- [-2384.690] (-2374.902) (-2382.854) (-2378.001) * (-2379.496) (-2375.440) (-2378.590) [-2380.835] -- 0:00:33
937000 -- (-2395.608) [-2380.923] (-2377.400) (-2377.021) * (-2387.726) (-2375.176) (-2386.728) [-2383.099] -- 0:00:33
938000 -- (-2375.457) (-2383.933) [-2370.866] (-2377.628) * (-2375.956) (-2384.839) [-2370.919] (-2388.845) -- 0:00:32
939000 -- (-2377.705) (-2379.033) [-2375.139] (-2373.816) * (-2375.609) (-2390.443) [-2380.926] (-2380.043) -- 0:00:32
940000 -- (-2401.016) (-2381.864) (-2380.212) [-2377.489] * (-2379.928) [-2387.076] (-2376.565) (-2379.768) -- 0:00:31
Average standard deviation of split frequencies: 0.011447
941000 -- [-2379.315] (-2374.532) (-2375.426) (-2383.936) * (-2383.317) (-2384.703) (-2379.268) [-2370.284] -- 0:00:31
942000 -- (-2382.895) (-2382.197) (-2376.021) [-2383.308] * (-2382.479) (-2375.224) (-2385.039) [-2376.730] -- 0:00:30
943000 -- (-2377.437) [-2370.380] (-2385.747) (-2387.003) * [-2376.383] (-2391.973) (-2379.712) (-2376.922) -- 0:00:30
944000 -- (-2376.953) (-2375.065) (-2378.260) [-2382.957] * (-2372.325) (-2380.292) (-2378.725) [-2379.854] -- 0:00:29
945000 -- [-2376.709] (-2381.332) (-2387.585) (-2376.718) * [-2379.382] (-2376.160) (-2390.083) (-2376.367) -- 0:00:29
Average standard deviation of split frequencies: 0.011251
946000 -- (-2382.018) (-2383.145) (-2385.451) [-2374.448] * (-2382.462) [-2371.096] (-2386.163) (-2380.458) -- 0:00:28
947000 -- [-2377.281] (-2383.764) (-2387.614) (-2374.348) * (-2379.920) [-2372.320] (-2386.181) (-2381.679) -- 0:00:27
948000 -- (-2380.852) [-2375.139] (-2386.191) (-2390.289) * (-2375.686) (-2375.566) (-2383.365) [-2376.443] -- 0:00:27
949000 -- (-2373.230) (-2373.489) [-2377.137] (-2381.409) * (-2383.404) (-2376.208) [-2380.111] (-2382.337) -- 0:00:26
950000 -- [-2378.051] (-2378.308) (-2381.837) (-2384.671) * (-2381.392) (-2382.027) [-2373.703] (-2381.637) -- 0:00:26
Average standard deviation of split frequencies: 0.011092
951000 -- (-2383.013) (-2384.395) [-2376.911] (-2380.619) * (-2376.678) [-2377.185] (-2384.316) (-2378.901) -- 0:00:25
952000 -- (-2376.839) (-2385.459) (-2380.831) [-2373.213] * (-2382.998) (-2370.340) [-2378.050] (-2380.701) -- 0:00:25
953000 -- (-2378.026) (-2389.158) (-2371.636) [-2387.729] * [-2382.757] (-2388.152) (-2385.804) (-2386.398) -- 0:00:24
954000 -- (-2374.279) (-2382.828) (-2382.415) [-2377.792] * (-2378.524) [-2376.831] (-2391.620) (-2384.728) -- 0:00:24
955000 -- (-2381.387) (-2389.536) (-2382.019) [-2380.243] * (-2389.347) (-2376.763) (-2380.394) [-2376.889] -- 0:00:23
Average standard deviation of split frequencies: 0.010744
956000 -- (-2382.797) [-2375.997] (-2382.813) (-2371.311) * (-2383.049) (-2385.213) [-2375.872] (-2388.823) -- 0:00:23
957000 -- [-2376.038] (-2386.896) (-2378.392) (-2376.636) * (-2383.038) (-2382.721) [-2373.781] (-2380.514) -- 0:00:22
958000 -- (-2373.206) (-2382.221) (-2383.648) [-2382.491] * [-2377.970] (-2387.984) (-2375.620) (-2386.039) -- 0:00:22
959000 -- (-2379.928) (-2382.699) [-2375.123] (-2380.794) * (-2375.443) (-2377.730) [-2376.187] (-2387.931) -- 0:00:21
960000 -- (-2387.958) [-2375.442] (-2388.652) (-2382.948) * [-2378.206] (-2377.323) (-2384.140) (-2379.843) -- 0:00:21
Average standard deviation of split frequencies: 0.010718
961000 -- [-2373.799] (-2377.285) (-2380.608) (-2381.944) * (-2376.150) (-2388.666) (-2377.577) [-2377.234] -- 0:00:20
962000 -- (-2388.587) (-2372.468) [-2374.369] (-2387.055) * (-2380.724) (-2380.016) [-2389.334] (-2379.504) -- 0:00:20
963000 -- [-2382.769] (-2378.472) (-2381.945) (-2383.079) * [-2375.193] (-2382.545) (-2385.431) (-2384.077) -- 0:00:19
964000 -- (-2382.153) [-2373.824] (-2381.942) (-2382.035) * [-2370.228] (-2375.829) (-2385.331) (-2380.763) -- 0:00:19
965000 -- [-2379.305] (-2379.352) (-2380.875) (-2381.012) * [-2380.208] (-2392.267) (-2367.681) (-2378.451) -- 0:00:18
Average standard deviation of split frequencies: 0.010813
966000 -- [-2369.003] (-2382.256) (-2386.037) (-2381.643) * [-2385.437] (-2375.667) (-2380.430) (-2385.818) -- 0:00:17
967000 -- (-2392.537) (-2373.907) [-2373.703] (-2395.272) * (-2381.677) [-2378.791] (-2374.499) (-2374.513) -- 0:00:17
968000 -- [-2375.234] (-2381.877) (-2383.766) (-2374.140) * [-2383.147] (-2375.021) (-2389.327) (-2385.902) -- 0:00:16
969000 -- (-2381.796) [-2371.281] (-2379.200) (-2376.540) * [-2377.192] (-2394.017) (-2374.413) (-2379.895) -- 0:00:16
970000 -- [-2379.930] (-2385.343) (-2373.500) (-2377.269) * [-2380.246] (-2377.319) (-2380.293) (-2371.994) -- 0:00:15
Average standard deviation of split frequencies: 0.010608
971000 -- (-2372.766) (-2380.441) (-2374.277) [-2374.525] * [-2377.625] (-2385.280) (-2380.548) (-2379.973) -- 0:00:15
972000 -- (-2386.548) (-2388.200) [-2376.221] (-2385.207) * (-2381.525) (-2379.797) (-2376.087) [-2374.038] -- 0:00:14
973000 -- (-2389.340) [-2371.502] (-2377.445) (-2377.376) * [-2376.650] (-2388.567) (-2371.974) (-2383.117) -- 0:00:14
974000 -- (-2382.422) [-2388.401] (-2374.698) (-2382.212) * (-2380.496) (-2391.987) (-2374.929) [-2381.722] -- 0:00:13
975000 -- (-2378.659) (-2382.899) [-2374.739] (-2377.837) * (-2382.570) (-2382.784) (-2389.731) [-2378.871] -- 0:00:13
Average standard deviation of split frequencies: 0.010270
976000 -- (-2384.438) (-2381.208) [-2389.336] (-2384.428) * (-2372.549) (-2382.524) [-2378.540] (-2391.850) -- 0:00:12
977000 -- [-2380.565] (-2380.820) (-2385.557) (-2378.516) * [-2378.431] (-2385.415) (-2373.287) (-2375.636) -- 0:00:12
978000 -- (-2376.724) (-2382.723) [-2378.328] (-2380.743) * (-2381.043) [-2384.062] (-2383.194) (-2383.394) -- 0:00:11
979000 -- [-2383.013] (-2382.839) (-2383.486) (-2376.321) * [-2375.071] (-2396.461) (-2393.176) (-2377.806) -- 0:00:11
980000 -- [-2381.772] (-2385.083) (-2387.517) (-2377.318) * (-2383.286) [-2379.000] (-2383.939) (-2375.597) -- 0:00:10
Average standard deviation of split frequencies: 0.009867
981000 -- [-2387.170] (-2390.243) (-2383.969) (-2374.443) * (-2376.130) (-2387.826) (-2375.343) [-2389.020] -- 0:00:10
982000 -- (-2382.721) (-2383.681) (-2385.323) [-2378.254] * (-2385.783) (-2380.766) [-2375.065] (-2386.172) -- 0:00:09
983000 -- (-2374.953) (-2380.279) (-2379.940) [-2366.989] * (-2382.777) (-2383.905) [-2374.185] (-2384.446) -- 0:00:08
984000 -- (-2378.153) (-2383.463) [-2381.918] (-2375.307) * [-2379.668] (-2384.659) (-2378.285) (-2374.124) -- 0:00:08
985000 -- (-2376.620) (-2381.900) (-2382.547) [-2373.059] * (-2375.737) (-2383.778) (-2382.835) [-2373.341] -- 0:00:07
Average standard deviation of split frequencies: 0.009965
986000 -- (-2385.468) [-2379.351] (-2382.223) (-2379.784) * [-2370.680] (-2380.080) (-2388.759) (-2381.624) -- 0:00:07
987000 -- (-2377.888) [-2375.752] (-2384.657) (-2382.183) * (-2376.456) (-2383.318) (-2385.615) [-2386.543] -- 0:00:06
988000 -- (-2372.516) (-2374.043) [-2374.122] (-2383.787) * (-2377.307) (-2375.753) (-2378.667) [-2372.768] -- 0:00:06
989000 -- (-2375.311) (-2381.197) (-2391.563) [-2377.272] * (-2381.300) (-2376.000) [-2380.144] (-2371.117) -- 0:00:05
990000 -- (-2385.741) [-2372.999] (-2379.916) (-2383.239) * (-2384.020) [-2379.844] (-2368.444) (-2375.750) -- 0:00:05
Average standard deviation of split frequencies: 0.009918
991000 -- (-2377.749) [-2385.991] (-2380.797) (-2383.034) * [-2377.961] (-2377.699) (-2381.595) (-2367.927) -- 0:00:04
992000 -- (-2373.816) (-2379.860) (-2382.498) [-2375.191] * [-2369.564] (-2384.101) (-2375.141) (-2376.675) -- 0:00:04
993000 -- (-2385.909) (-2385.234) (-2382.201) [-2380.002] * (-2372.322) (-2385.210) (-2377.864) [-2373.789] -- 0:00:03
994000 -- (-2378.347) (-2389.462) [-2378.764] (-2379.758) * (-2380.555) (-2387.606) (-2391.105) [-2385.683] -- 0:00:03
995000 -- (-2376.117) [-2388.338] (-2385.351) (-2382.004) * (-2378.065) [-2370.666] (-2387.241) (-2380.120) -- 0:00:02
Average standard deviation of split frequencies: 0.009840
996000 -- (-2382.553) (-2386.709) (-2372.661) [-2378.964] * [-2383.259] (-2373.210) (-2383.623) (-2384.277) -- 0:00:02
997000 -- (-2384.064) (-2376.680) (-2378.884) [-2377.086] * [-2375.668] (-2381.985) (-2384.261) (-2387.096) -- 0:00:01
998000 -- (-2383.548) (-2396.685) [-2373.784] (-2376.337) * (-2369.153) [-2373.401] (-2384.094) (-2376.102) -- 0:00:01
999000 -- [-2378.279] (-2380.862) (-2385.195) (-2379.634) * [-2382.127] (-2380.909) (-2380.953) (-2381.614) -- 0:00:00
1000000 -- [-2377.238] (-2388.492) (-2381.305) (-2377.680) * [-2380.061] (-2385.751) (-2377.439) (-2378.495) -- 0:00:00
Average standard deviation of split frequencies: 0.009918
Analysis completed in 8 mins 49 seconds
Analysis used 528.24 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -2363.96
Likelihood of best state for "cold" chain of run 2 was -2364.16
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
43.9 % ( 42 %) Dirichlet(Revmat{all})
63.0 % ( 48 %) Slider(Revmat{all})
25.1 % ( 26 %) Dirichlet(Pi{all})
27.5 % ( 31 %) Slider(Pi{all})
37.1 % ( 29 %) Multiplier(Alpha{1,2})
50.9 % ( 23 %) Multiplier(Alpha{3})
49.3 % ( 29 %) Slider(Pinvar{all})
26.7 % ( 26 %) ExtSPR(Tau{all},V{all})
18.4 % ( 15 %) ExtTBR(Tau{all},V{all})
29.0 % ( 23 %) NNI(Tau{all},V{all})
33.6 % ( 36 %) ParsSPR(Tau{all},V{all})
26.6 % ( 21 %) Multiplier(V{all})
42.5 % ( 42 %) Nodeslider(V{all})
25.6 % ( 22 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
43.5 % ( 34 %) Dirichlet(Revmat{all})
63.1 % ( 51 %) Slider(Revmat{all})
25.5 % ( 28 %) Dirichlet(Pi{all})
27.2 % ( 16 %) Slider(Pi{all})
36.8 % ( 22 %) Multiplier(Alpha{1,2})
51.0 % ( 28 %) Multiplier(Alpha{3})
49.1 % ( 33 %) Slider(Pinvar{all})
26.6 % ( 24 %) ExtSPR(Tau{all},V{all})
18.3 % ( 19 %) ExtTBR(Tau{all},V{all})
29.5 % ( 32 %) NNI(Tau{all},V{all})
33.7 % ( 36 %) ParsSPR(Tau{all},V{all})
26.7 % ( 20 %) Multiplier(V{all})
42.5 % ( 44 %) Nodeslider(V{all})
25.4 % ( 27 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.74 0.53 0.37
2 | 167414 0.76 0.56
3 | 166227 166685 0.78
4 | 166511 166360 166803
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.74 0.53 0.37
2 | 166339 0.76 0.56
3 | 167026 166674 0.78
4 | 166302 166289 167370
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -2375.80
| 2 2 |
| 12 1 1 1 |
| 1 |
| 1 2 21 11 1 1 1 |
| 2 1 2 2 2 2 2 2 2|
| 2 1 1 1 1 1 1 22 2 2 1 1 1 |
| 211 2 122 21 1 22 21 2 12 2 1 |
|* 2 12 1 12 2 1 2 2 2 11 1 1|
| *1 1 2 2 2121 *2 21 2 2 2 12 |
| 2 * 1 2 1 1 12 |
| * 1 2 1 2 2 |
| 1 1 |
| 21 2 |
| 1 |
| 2 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -2381.18
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2372.32 -2388.17
2 -2372.26 -2388.42
--------------------------------------
TOTAL -2372.29 -2388.30
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.653972 0.007728 0.489211 0.826482 0.647555 1153.48 1173.11 1.000
r(A<->C){all} 0.039151 0.000296 0.007459 0.072278 0.037306 831.72 849.96 1.000
r(A<->G){all} 0.271796 0.001990 0.191743 0.359718 0.270352 799.18 826.62 1.002
r(A<->T){all} 0.049871 0.000169 0.024782 0.074535 0.048647 921.05 1090.10 1.001
r(C<->G){all} 0.026005 0.000323 0.000239 0.061663 0.023120 792.21 813.60 1.000
r(C<->T){all} 0.577163 0.002604 0.482769 0.679538 0.578089 717.84 752.38 1.002
r(G<->T){all} 0.036015 0.000197 0.011981 0.064879 0.034433 908.52 927.62 1.000
pi(A){all} 0.312353 0.000220 0.282297 0.340560 0.312235 1111.34 1188.42 1.000
pi(C){all} 0.161779 0.000124 0.141540 0.184300 0.161479 1174.35 1179.88 1.000
pi(G){all} 0.198559 0.000173 0.171646 0.222606 0.198149 1054.67 1162.38 1.000
pi(T){all} 0.327309 0.000218 0.298656 0.355812 0.327208 1127.29 1182.67 1.000
alpha{1,2} 0.119615 0.001122 0.054998 0.193833 0.120255 894.53 938.47 1.000
alpha{3} 3.794467 2.273703 1.449325 7.042519 3.555222 1106.25 1232.97 1.000
pinvar{all} 0.485423 0.003415 0.363468 0.592030 0.491663 828.38 986.29 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C11
4 -- C12
5 -- C2
6 -- C3
7 -- C4
8 -- C5
9 -- C6
10 -- C7
11 -- C8
12 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------
1 -- .***********
2 -- .*..........
3 -- ..*.........
4 -- ...*........
5 -- ....*.......
6 -- .....*......
7 -- ......*.....
8 -- .......*....
9 -- ........*...
10 -- .........*..
11 -- ..........*.
12 -- ...........*
13 -- .*.........*
14 -- ......*.*.*.
15 -- .***.**.*.**
16 -- ..**........
17 -- ......*...*.
18 -- ..**..*.*.*.
19 -- .***..*.*.**
20 -- ..**.**.*.*.
21 -- .***.****.**
22 -- .***.*******
23 -- ....*....*..
24 -- .***.**.****
25 -- .********.**
26 -- ....*..*....
27 -- .******.****
28 -- .......*.*..
29 -- .******.*.**
30 -- ....*..*.*..
31 -- .....**.*.*.
------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
13 3002 1.000000 0.000000 1.000000 1.000000 2
14 3002 1.000000 0.000000 1.000000 1.000000 2
15 3002 1.000000 0.000000 1.000000 1.000000 2
16 2946 0.981346 0.001884 0.980013 0.982678 2
17 2768 0.922052 0.005653 0.918055 0.926049 2
18 2466 0.821452 0.013191 0.812125 0.830779 2
19 1412 0.470353 0.001884 0.469021 0.471686 2
20 1118 0.372418 0.000942 0.371752 0.373085 2
21 661 0.220187 0.000471 0.219853 0.220520 2
22 636 0.211859 0.006595 0.207195 0.216522 2
23 628 0.209194 0.005653 0.205197 0.213191 2
24 603 0.200866 0.031563 0.178548 0.223185 2
25 602 0.200533 0.016959 0.188541 0.212525 2
26 591 0.196869 0.025910 0.178548 0.215190 2
27 587 0.195536 0.013662 0.185876 0.205197 2
28 578 0.192538 0.019786 0.178548 0.206529 2
29 575 0.191539 0.022141 0.175883 0.207195 2
30 543 0.180879 0.007066 0.175883 0.185876 2
31 344 0.114590 0.015075 0.103931 0.125250 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.001603 0.000003 0.000002 0.004837 0.001110 1.000 2
length{all}[2] 0.001569 0.000002 0.000000 0.004727 0.001062 1.000 2
length{all}[3] 0.012616 0.000027 0.003701 0.022741 0.011938 1.000 2
length{all}[4] 0.007640 0.000018 0.000648 0.015812 0.006986 1.000 2
length{all}[5] 0.001602 0.000003 0.000000 0.004681 0.001108 1.000 2
length{all}[6] 0.016941 0.000078 0.000126 0.032735 0.016233 1.000 2
length{all}[7] 0.034406 0.000133 0.013206 0.057290 0.033339 1.000 2
length{all}[8] 0.003131 0.000005 0.000001 0.007556 0.002618 1.000 2
length{all}[9] 0.074528 0.000562 0.028935 0.120539 0.071610 1.000 2
length{all}[10] 0.003104 0.000005 0.000066 0.007392 0.002576 1.001 2
length{all}[11] 0.039008 0.000151 0.016740 0.064120 0.037888 1.000 2
length{all}[12] 0.001559 0.000002 0.000000 0.004564 0.001101 1.001 2
length{all}[13] 0.070499 0.000285 0.040215 0.104362 0.068273 1.000 2
length{all}[14] 0.246399 0.003058 0.152765 0.362820 0.240517 1.000 2
length{all}[15] 0.035486 0.000124 0.015705 0.058263 0.034491 1.000 2
length{all}[16] 0.032170 0.000254 0.003780 0.063283 0.030593 1.000 2
length{all}[17] 0.033517 0.000311 0.002836 0.067975 0.031292 1.000 2
length{all}[18] 0.025119 0.000195 0.000689 0.051110 0.022976 1.000 2
length{all}[19] 0.015172 0.000067 0.000953 0.029451 0.014069 1.000 2
length{all}[20] 0.013798 0.000057 0.001217 0.029452 0.012640 1.000 2
length{all}[21] 0.001900 0.000004 0.000006 0.005767 0.001348 0.999 2
length{all}[22] 0.001644 0.000002 0.000004 0.004897 0.001176 1.000 2
length{all}[23] 0.001588 0.000003 0.000005 0.005129 0.001065 0.998 2
length{all}[24] 0.001657 0.000003 0.000006 0.004515 0.001192 1.001 2
length{all}[25] 0.001688 0.000003 0.000001 0.004717 0.001194 0.998 2
length{all}[26] 0.001582 0.000002 0.000001 0.004689 0.001063 0.999 2
length{all}[27] 0.001646 0.000003 0.000009 0.005023 0.001166 0.998 2
length{all}[28] 0.001613 0.000003 0.000001 0.004890 0.001139 0.999 2
length{all}[29] 0.001548 0.000002 0.000004 0.004455 0.001098 1.000 2
length{all}[30] 0.001538 0.000002 0.000001 0.004474 0.001063 0.999 2
length{all}[31] 0.014674 0.000077 0.000653 0.032353 0.013745 0.998 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.009918
Maximum standard deviation of split frequencies = 0.031563
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.001
Clade credibility values:
/----------------------------------------------------------------------- C1 (1)
|
|----------------------------------------------------------------------- C2 (5)
|
|----------------------------------------------------------------------- C5 (8)
|
|----------------------------------------------------------------------- C7 (10)
|
+ /-------------- C10 (2)
| /--------------------100-------------------+
| | \-------------- C9 (12)
| |
| | /-------------- C11 (3)
| | /-------------98-------------+
| | | \-------------- C12 (4)
| | |
\-----100-----+------82-----+ /-------------- C4 (7)
| | /------92-----+
| | | \-------------- C8 (11)
| \------100-----+
| \---------------------------- C6 (9)
|
\--------------------------------------------------------- C3 (6)
Phylogram (based on average branch lengths):
/ C1 (1)
|
| C2 (5)
|
|- C5 (8)
|
| C7 (10)
|
+ / C10 (2)
| /------------+
| | \ C9 (12)
| |
| | /-- C11 (3)
| | /-----+
| | | \- C12 (4)
| | |
\------+---+ /------ C4 (7)
| | /-----+
| | | \------- C8 (11)
| \----------------------------------------------+
| \------------- C6 (9)
|
\--- C3 (6)
|--------| 0.050 expected changes per site
Calculating tree probabilities...
Credible sets of trees (282 trees sampled):
50 % credible set contains 21 trees
90 % credible set contains 109 trees
95 % credible set contains 158 trees
99 % credible set contains 252 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Wed Nov 09 22:46:08 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.06 sec, SCORE=1000, Nseq=12, Len=300
C1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLC
C2 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLC
C3 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C4 SSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C5 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTRLC
C6 SSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C7 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLC
C8 SSVWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C9 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C10 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
C11 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPVGITTKFVKYTQLC
C12 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLC
*: ******************************:** ****:.****:**
C1 QYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C2 QYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C3 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C4 QYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLKRWLPDDAILVDNDMR
C5 QYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C6 QYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLRRWLPDDAILVDNDMR
C7 QYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C8 QYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLKRWLPDDAILVDNDMR
C9 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C10 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C11 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
C12 QYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLR
*******:****************.*****:***:*************:*
C1 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C2 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C3 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C4 DYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C5 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C6 DYVSDADFSFTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENISKDGFFT
C7 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C8 DYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C9 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C10 DYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFT
C11 DYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFT
C12 DYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFT
*********.*****.**********:*************** *******
C1 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C2 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C3 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C4 YINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSS
C5 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C6 YINGFINEKLALGGSVAIKITEFSWNKILYELIQRFEYWTVFCTSVNTSS
C7 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C8 YINGFINEKLALGGSVAIKITEFSWNKTLYELIQRFEYWTVFCTSVNTSS
C9 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C10 YINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C11 YINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
C12 YINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSS
******:***:****.*********** **********************
C1 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C2 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C3 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C4 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C5 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C6 SEGFLIGINYLGLYCDKAVVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C7 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C8 SEGFLVGINYLGPYSDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C9 SEGFLIGINYLGPYCEKAIVDGNIMHANYIFWRNSTIMSLSHNSVLDTPK
C10 SEGFLIGINYLGPYCEKAIVDGNIMHANYIFWRNSTIMSLSHNSVLDTPK
C11 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
C12 SEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPK
*****:****** *.:**:*******************:***********
C1 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C2 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C3 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHFVNTP
C4 FKCRCNNALVVNLKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP
C5 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C6 FKCRCNNALVVNLKERELNDMVVGLLRKGKILIRNNGKLLNFGNHFVNTP
C7 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C8 FKCRCNNALVVNLKERELNDMVVGLLRKGKILIRNNGKLLNFGNHFVNTP
C9 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C10 FKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
C11 FKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
C12 FKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
*********:*****:***:**:*******:**************:**.*
-- Starting log on Thu Nov 10 16:37:41 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1.result/original_alignment/codeml,A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C1 900 sites
reading seq# 2 C2 900 sites
reading seq# 3 C3 900 sites
reading seq# 4 C4 900 sites
reading seq# 5 C5 900 sites
reading seq# 6 C6 900 sites
reading seq# 7 C7 900 sites
reading seq# 8 C8 900 sites
reading seq# 9 C9 900 sites
reading seq#10 C10 900 sites
reading seq#11 C11 900 sites
reading seq#12 C12 900 sitesns = 12 ls = 900
Reading sequences, sequential format..
Reading seq # 1: C1
Reading seq # 2: C2
Reading seq # 3: C3
Reading seq # 4: C4
Reading seq # 5: C5
Reading seq # 6: C6
Reading seq # 7: C7
Reading seq # 8: C8
Reading seq # 9: C9
Reading seq #10: C10
Reading seq #11: C11
Reading seq #12: C12
Sequences read..
Counting site patterns.. 0:00
Compressing, 188 patterns at 300 / 300 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 188 patterns at 300 / 300 sites (100.0%), 0:00
Counting codons..
528 bytes for distance
183488 bytes for conP
16544 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(1, 2, 5, 7, ((10, 9), ((11, 12), ((4, 8), 6)), 3)); MP score: 233
642208 bytes for conP, adjusted
0.098743 0.095112 0.019775 0.089179 0.098148 0.070901 0.074573 0.069345 0.106915 0.065268 0.087719 0.098167 0.089823 0.025746 0.095826 0.098824 0.078366 0.091946 0.300000 0.894651 0.285390
ntime & nrate & np: 18 2 21
Bounds (np=21):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 16.450209
np = 21
lnL0 = -2714.399480
Iterating by ming2
Initial: fx= 2714.399480
x= 0.09874 0.09511 0.01978 0.08918 0.09815 0.07090 0.07457 0.06934 0.10692 0.06527 0.08772 0.09817 0.08982 0.02575 0.09583 0.09882 0.07837 0.09195 0.30000 0.89465 0.28539
1 h-m-p 0.0000 0.0001 1072.3682 ++ 2622.693652 m 0.0001 26 | 0/21
2 h-m-p 0.0000 0.0000 27787.9136 ++ 2468.099218 m 0.0000 50 | 1/21
3 h-m-p 0.0000 0.0000 2286.5502 ++ 2454.184727 m 0.0000 74 | 2/21
4 h-m-p 0.0000 0.0000 6463725.7361 ++ 2408.346835 m 0.0000 98 | 3/21
5 h-m-p 0.0000 0.0000 6092.0021 ++ 2401.247424 m 0.0000 122 | 4/21
6 h-m-p 0.0000 0.0002 967.2013 ++YYYCCCCC 2350.063676 7 0.0002 159 | 4/21
7 h-m-p 0.0001 0.0003 362.1467 +YYCYC 2334.322251 4 0.0003 189 | 4/21
8 h-m-p 0.0001 0.0005 128.7804 +YYCCCC 2332.105139 5 0.0003 222 | 4/21
9 h-m-p 0.0003 0.0024 103.2448 YCCCC 2331.417052 4 0.0002 253 | 4/21
10 h-m-p 0.0013 0.0080 16.9973 CCC 2331.049504 2 0.0014 281 | 4/21
11 h-m-p 0.0024 0.0225 9.5146 YCCC 2329.766893 3 0.0044 310 | 4/21
12 h-m-p 0.0009 0.0043 36.9103 CCC 2327.869641 2 0.0013 338 | 4/21
13 h-m-p 0.0009 0.0043 29.2137 CYC 2327.515497 2 0.0008 365 | 4/21
14 h-m-p 0.0028 0.0292 8.4459 C 2327.485277 0 0.0007 389 | 4/21
15 h-m-p 0.0039 0.1260 1.5477 YC 2327.381892 1 0.0077 414 | 4/21
16 h-m-p 0.0029 0.0276 4.0973 +YYC 2325.932962 2 0.0100 441 | 4/21
17 h-m-p 0.0007 0.0037 25.7321 CCC 2325.362562 2 0.0010 469 | 4/21
18 h-m-p 0.0041 0.0326 6.2558 CC 2325.315751 1 0.0013 495 | 4/21
19 h-m-p 0.0059 0.0941 1.3578 +YCC 2324.769820 2 0.0170 523 | 4/21
20 h-m-p 0.0010 0.0048 11.0751 ++ 2318.300529 m 0.0048 547 | 4/21
21 h-m-p 0.0405 0.2027 0.5108 YCCCC 2313.906737 4 0.1010 578 | 4/21
22 h-m-p 0.1079 0.5397 0.2393 +YCYCCC 2308.849715 5 0.3070 628 | 4/21
23 h-m-p 0.1481 1.4538 0.4963 YC 2304.790976 1 0.2905 670 | 4/21
24 h-m-p 0.1230 0.6148 0.2139 +CCYCC 2294.253446 4 0.5080 719 | 4/21
25 h-m-p 0.0476 0.2381 1.3911 +YCCCC 2282.273033 4 0.1408 768 | 4/21
26 h-m-p 0.7421 8.0000 0.2639 CCCC 2277.033855 3 0.7218 798 | 4/21
27 h-m-p 0.6490 3.2451 0.1591 YCCCCC 2268.854357 5 1.5354 848 | 4/21
28 h-m-p 0.3745 1.8725 0.2573 +YYYCCC 2262.065183 5 1.3488 897 | 4/21
29 h-m-p 0.5409 2.7043 0.3434 YYCCC 2259.069442 4 0.8143 944 | 4/21
30 h-m-p 1.1608 5.8038 0.2046 YCC 2254.689451 2 2.3658 988 | 4/21
31 h-m-p 1.1434 5.7168 0.2481 CCCC 2252.659709 3 1.7199 1035 | 4/21
32 h-m-p 0.5737 2.8687 0.1903 CCCC 2252.199973 3 0.8520 1082 | 4/21
33 h-m-p 1.6000 8.0000 0.0963 CCC 2251.983674 2 1.5353 1127 | 4/21
34 h-m-p 1.6000 8.0000 0.0800 CC 2251.907801 1 1.4990 1170 | 4/21
35 h-m-p 1.6000 8.0000 0.0238 YC 2251.894926 1 0.9963 1212 | 4/21
36 h-m-p 1.6000 8.0000 0.0051 YC 2251.879887 1 3.8059 1254 | 4/21
37 h-m-p 1.6000 8.0000 0.0055 CC 2251.868770 1 1.8820 1297 | 4/21
38 h-m-p 0.9359 8.0000 0.0111 CC 2251.864714 1 1.2644 1340 | 4/21
39 h-m-p 1.6000 8.0000 0.0016 CC 2251.861519 1 2.5256 1383 | 4/21
40 h-m-p 0.7476 8.0000 0.0054 ++ 2251.841982 m 8.0000 1424 | 4/21
41 h-m-p 1.0550 8.0000 0.0410 +YC 2251.772516 1 3.1459 1467 | 4/21
42 h-m-p 1.6000 8.0000 0.0228 ++ 2251.538468 m 8.0000 1508 | 4/21
43 h-m-p 1.6000 8.0000 0.0168 +YCC 2251.137216 2 4.5911 1553 | 4/21
44 h-m-p 1.6000 8.0000 0.0074 YCC 2250.822819 2 2.7394 1597 | 4/21
45 h-m-p 1.6000 8.0000 0.0125 CCC 2250.663183 2 2.3228 1642 | 4/21
46 h-m-p 1.6000 8.0000 0.0053 CCC 2250.605419 2 2.1860 1687 | 4/21
47 h-m-p 1.6000 8.0000 0.0026 C 2250.595410 0 1.5574 1728 | 4/21
48 h-m-p 1.6000 8.0000 0.0006 YC 2250.594936 1 1.2602 1770 | 4/21
49 h-m-p 1.6000 8.0000 0.0003 C 2250.594915 0 1.5459 1811 | 4/21
50 h-m-p 1.6000 8.0000 0.0001 C 2250.594914 0 1.5195 1852 | 4/21
51 h-m-p 1.6000 8.0000 0.0000 C 2250.594913 0 1.4942 1893 | 4/21
52 h-m-p 1.6000 8.0000 0.0000 C 2250.594913 0 0.4000 1934 | 4/21
53 h-m-p 0.6080 8.0000 0.0000 ----------------.. | 4/21
54 h-m-p 0.0160 8.0000 0.0063 ------------- | 4/21
55 h-m-p 0.0160 8.0000 0.0063 -------------
Out..
lnL = -2250.594913
2094 lfun, 6282 eigenQcodon, 75384 P(t)
end of tree file.
Time used: 0:35
Model 2: PositiveSelection
TREE # 1
(1, 2, 5, 7, ((10, 9), ((11, 12), ((4, 8), 6)), 3)); MP score: 233
0.049145 0.038413 0.051173 0.094362 0.099424 0.011933 0.039368 0.012646 0.062036 0.011700 0.019798 0.047020 0.076845 0.035791 0.077288 0.036930 0.010922 0.092396 3.559871 1.606184 0.259977 0.438609 1.401972
ntime & nrate & np: 18 3 23
Bounds (np=23):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 4.148065
np = 23
lnL0 = -2601.988257
Iterating by ming2
Initial: fx= 2601.988257
x= 0.04915 0.03841 0.05117 0.09436 0.09942 0.01193 0.03937 0.01265 0.06204 0.01170 0.01980 0.04702 0.07685 0.03579 0.07729 0.03693 0.01092 0.09240 3.55987 1.60618 0.25998 0.43861 1.40197
1 h-m-p 0.0000 0.0001 2912.4891 ++ 2479.231893 m 0.0001 51 | 1/23
2 h-m-p 0.0000 0.0001 753.5568 ++ 2435.016111 m 0.0001 100 | 2/23
3 h-m-p 0.0000 0.0000 1396.9949 ++ 2433.561369 m 0.0000 148 | 3/23
4 h-m-p 0.0000 0.0000 2472.7836 ++ 2428.101098 m 0.0000 195 | 4/23
5 h-m-p 0.0000 0.0000 3159.7963 +YCYYYCC 2413.197630 6 0.0000 251 | 4/23
6 h-m-p 0.0002 0.0015 265.5828 ++ 2330.869763 m 0.0015 296 | 5/23
7 h-m-p 0.0000 0.0002 839.3132 CCCC 2330.539527 3 0.0001 347 | 5/23
8 h-m-p 0.0002 0.0014 188.2282 +YYCCC 2325.660596 4 0.0007 398 | 5/23
9 h-m-p 0.0001 0.0003 470.5378 +YCYCCC 2321.469121 5 0.0002 451 | 5/23
10 h-m-p 0.0001 0.0004 431.4952 YCCCC 2319.161821 4 0.0002 502 | 5/23
11 h-m-p 0.0003 0.0017 77.9193 YCCC 2318.850088 3 0.0001 551 | 5/23
12 h-m-p 0.0003 0.0039 32.1958 YC 2318.108946 1 0.0008 596 | 5/23
13 h-m-p 0.0003 0.0015 76.8067 +YYYYYYCCCC 2314.052180 9 0.0012 653 | 5/23
14 h-m-p 0.0000 0.0002 193.1956 +YYCYC 2312.789432 4 0.0001 703 | 5/23
15 h-m-p 0.0002 0.0010 94.3727 CCCC 2312.256465 3 0.0002 753 | 5/23
16 h-m-p 0.0009 0.0068 26.6901 YCC 2312.115365 2 0.0005 800 | 5/23
17 h-m-p 0.0006 0.0116 22.9144 +++ 2308.342537 m 0.0116 845 | 6/23
18 h-m-p 0.0006 0.0058 446.6249 +CCCCC 2302.708882 4 0.0025 898 | 6/23
19 h-m-p 0.0791 0.3953 7.5661 CYCCC 2288.563705 4 0.0980 948 | 5/23
20 h-m-p 0.0000 0.0002 12778.3137 CYCCC 2279.425126 4 0.0000 998 | 5/23
21 h-m-p 0.0274 0.1371 3.0399 +YYCYYCCC 2272.030760 7 0.1187 1053 | 5/23
22 h-m-p 0.0566 0.7980 6.3801 +YYYCCCCCC 2262.256822 8 0.2852 1111 | 5/23
23 h-m-p 0.5308 2.6542 0.8496 YCCCC 2255.400470 4 1.3336 1162 | 5/23
24 h-m-p 0.6590 3.2948 1.0452 YCCC 2253.231870 3 1.3333 1211 | 5/23
25 h-m-p 1.6000 8.0000 0.2216 CCCC 2251.710241 3 1.6884 1261 | 5/23
26 h-m-p 0.8131 5.2048 0.4602 CCC 2251.150363 2 0.9927 1309 | 5/23
27 h-m-p 1.6000 8.0000 0.0880 CCC 2250.804285 2 1.4749 1357 | 5/23
28 h-m-p 1.1421 8.0000 0.1137 CCC 2250.680044 2 1.4057 1405 | 5/23
29 h-m-p 1.6000 8.0000 0.0486 CC 2250.613722 1 1.9557 1451 | 5/23
30 h-m-p 1.6000 8.0000 0.0260 YC 2250.600648 1 1.2782 1496 | 5/23
31 h-m-p 1.6000 8.0000 0.0081 CC 2250.598201 1 2.1401 1542 | 5/23
32 h-m-p 1.6000 8.0000 0.0070 YC 2250.596127 1 3.9050 1587 | 5/23
33 h-m-p 1.6000 8.0000 0.0116 C 2250.595106 0 1.7783 1631 | 5/23
34 h-m-p 1.6000 8.0000 0.0022 C 2250.594954 0 1.4007 1675 | 5/23
35 h-m-p 1.6000 8.0000 0.0004 C 2250.594920 0 2.1507 1719 | 5/23
36 h-m-p 1.6000 8.0000 0.0001 C 2250.594914 0 1.7192 1763 | 5/23
37 h-m-p 0.9227 8.0000 0.0002 Y 2250.594914 0 1.5725 1807 | 5/23
38 h-m-p 1.6000 8.0000 0.0001 C 2250.594913 0 2.4994 1851 | 5/23
39 h-m-p 1.6000 8.0000 0.0000 C 2250.594913 0 1.5992 1895 | 5/23
40 h-m-p 1.6000 8.0000 0.0000 -----------C 2250.594913 0 0.0000 1950
Out..
lnL = -2250.594913
1951 lfun, 7804 eigenQcodon, 105354 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -2267.831896 S = -2195.749466 -107.148998
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 188 patterns 1:23
did 20 / 188 patterns 1:23
did 30 / 188 patterns 1:23
did 40 / 188 patterns 1:23
did 50 / 188 patterns 1:23
did 60 / 188 patterns 1:23
did 70 / 188 patterns 1:23
did 80 / 188 patterns 1:23
did 90 / 188 patterns 1:24
did 100 / 188 patterns 1:24
did 110 / 188 patterns 1:24
did 120 / 188 patterns 1:24
did 130 / 188 patterns 1:24
did 140 / 188 patterns 1:24
did 150 / 188 patterns 1:24
did 160 / 188 patterns 1:24
did 170 / 188 patterns 1:24
did 180 / 188 patterns 1:24
did 188 / 188 patterns 1:24end of tree file.
Time used: 1:24
Model 7: beta
TREE # 1
(1, 2, 5, 7, ((10, 9), ((11, 12), ((4, 8), 6)), 3)); MP score: 233
0.090843 0.083369 0.015941 0.069518 0.051936 0.086546 0.089717 0.058178 0.018442 0.086588 0.094908 0.016307 0.049834 0.031677 0.046097 0.077749 0.036255 0.095954 3.559881 0.520211 1.659689
ntime & nrate & np: 18 1 21
Bounds (np=21):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 7.548637
np = 21
lnL0 = -2483.596255
Iterating by ming2
Initial: fx= 2483.596255
x= 0.09084 0.08337 0.01594 0.06952 0.05194 0.08655 0.08972 0.05818 0.01844 0.08659 0.09491 0.01631 0.04983 0.03168 0.04610 0.07775 0.03625 0.09595 3.55988 0.52021 1.65969
1 h-m-p 0.0000 0.0001 1311.1107 ++ 2401.512490 m 0.0001 47 | 0/21
2 h-m-p 0.0000 0.0000 50098.4972 ++ 2323.639821 m 0.0000 92 | 1/21
3 h-m-p 0.0000 0.0000 894.7006 +CYYCYCYC 2310.104320 7 0.0000 149 | 1/21
4 h-m-p 0.0000 0.0000 2464.3898 ++ 2304.020719 m 0.0000 193 | 2/21
5 h-m-p 0.0000 0.0000 1127.4127 ++ 2298.901058 m 0.0000 237 | 3/21
6 h-m-p 0.0000 0.0000 3315.6293 ++ 2298.120503 m 0.0000 280 | 4/21
7 h-m-p 0.0000 0.0004 386.0363 ++CCYCCC 2287.354251 5 0.0003 334 | 4/21
8 h-m-p 0.0003 0.0013 287.3970 +YYCYCCC 2263.192317 6 0.0009 385 | 4/21
9 h-m-p 0.0005 0.0027 88.1426 YYYCCCC 2261.139679 6 0.0005 435 | 4/21
10 h-m-p 0.0008 0.0042 33.6879 YCC 2260.765857 2 0.0007 479 | 4/21
11 h-m-p 0.0014 0.0248 15.3005 CCC 2260.569638 2 0.0017 524 | 4/21
12 h-m-p 0.0007 0.0269 37.1409 +CCC 2259.698791 2 0.0035 570 | 4/21
13 h-m-p 0.0011 0.0053 109.7779 CCC 2258.986089 2 0.0010 615 | 4/21
14 h-m-p 0.0015 0.0073 64.9074 CCC 2258.316709 2 0.0017 660 | 4/21
15 h-m-p 0.0022 0.0111 10.9805 CC 2258.280491 1 0.0007 703 | 4/21
16 h-m-p 0.0072 0.1171 1.0367 +CCCC 2257.291572 3 0.0482 751 | 4/21
17 h-m-p 0.0017 0.0084 29.0091 CCCCC 2254.972098 4 0.0029 800 | 4/21
18 h-m-p 0.0003 0.0016 97.6005 YCCCC 2253.328433 4 0.0006 848 | 4/21
19 h-m-p 0.0933 1.2592 0.6582 +YCCCC 2252.742258 4 0.3915 897 | 4/21
20 h-m-p 1.6000 8.0000 0.0671 CCC 2252.529529 2 0.5370 942 | 4/21
21 h-m-p 0.2849 8.0000 0.1264 +CC 2252.453886 1 1.0604 986 | 4/21
22 h-m-p 0.7071 8.0000 0.1895 CC 2252.419247 1 0.6605 1029 | 4/21
23 h-m-p 1.6000 8.0000 0.0540 YC 2252.407546 1 0.9190 1071 | 4/21
24 h-m-p 1.3642 8.0000 0.0364 YC 2252.402506 1 1.0175 1113 | 4/21
25 h-m-p 1.0311 8.0000 0.0359 YC 2252.394567 1 2.3047 1155 | 4/21
26 h-m-p 1.2359 8.0000 0.0669 CC 2252.383186 1 1.8564 1198 | 4/21
27 h-m-p 1.6000 8.0000 0.0458 YC 2252.379863 1 0.9802 1240 | 4/21
28 h-m-p 1.6000 8.0000 0.0155 CC 2252.378033 1 2.5190 1283 | 4/21
29 h-m-p 1.6000 8.0000 0.0061 C 2252.377122 0 1.8565 1324 | 4/21
30 h-m-p 1.6000 8.0000 0.0013 C 2252.376472 0 1.9624 1365 | 4/21
31 h-m-p 1.6000 8.0000 0.0013 +YC 2252.374832 1 4.5630 1408 | 4/21
32 h-m-p 1.6000 8.0000 0.0012 ++ 2252.366902 m 8.0000 1449 | 4/21
33 h-m-p 0.4505 8.0000 0.0207 +CC 2252.361424 1 1.6362 1493 | 4/21
34 h-m-p 1.6000 8.0000 0.0045 YC 2252.361088 1 1.0294 1535 | 4/21
35 h-m-p 1.6000 8.0000 0.0006 Y 2252.361069 0 0.9578 1576 | 4/21
36 h-m-p 1.6000 8.0000 0.0003 Y 2252.361068 0 1.0241 1617 | 4/21
37 h-m-p 1.6000 8.0000 0.0000 Y 2252.361068 0 0.8601 1658 | 4/21
38 h-m-p 1.6000 8.0000 0.0000 Y 2252.361068 0 0.4000 1699 | 4/21
39 h-m-p 1.6000 8.0000 0.0000 -----C 2252.361068 0 0.0004 1745
Out..
lnL = -2252.361068
1746 lfun, 19206 eigenQcodon, 314280 P(t)
end of tree file.
Time used: 3:47
Model 8: beta&w>1
TREE # 1
(1, 2, 5, 7, ((10, 9), ((11, 12), ((4, 8), 6)), 3)); MP score: 233
0.015328 0.087566 0.108123 0.064757 0.094738 0.012874 0.025326 0.091164 0.060259 0.032743 0.012234 0.094136 0.023909 0.021859 0.102927 0.077255 0.041948 0.017021 3.530715 0.900000 0.475618 1.690483 1.300000
ntime & nrate & np: 18 2 23
Bounds (np=23):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 6.500144
np = 23
lnL0 = -2567.533104
Iterating by ming2
Initial: fx= 2567.533104
x= 0.01533 0.08757 0.10812 0.06476 0.09474 0.01287 0.02533 0.09116 0.06026 0.03274 0.01223 0.09414 0.02391 0.02186 0.10293 0.07725 0.04195 0.01702 3.53072 0.90000 0.47562 1.69048 1.30000
1 h-m-p 0.0000 0.0001 2935.5060 ++ 2396.805797 m 0.0001 51 | 1/23
2 h-m-p 0.0000 0.0001 616.2827 ++ 2373.342164 m 0.0001 100 | 2/23
3 h-m-p 0.0000 0.0000 16665.2744 ++ 2328.896039 m 0.0000 148 | 2/23
4 h-m-p -0.0000 -0.0000 3408.2690
h-m-p: -4.61489938e-18 -2.30744969e-17 3.40826901e+03 2328.896039
.. | 2/23
5 h-m-p 0.0000 0.0001 169446.7891 --CCYYCYYCCC 2322.993353 9 0.0000 256 | 2/23
6 h-m-p 0.0000 0.0001 534.8638 ++ 2305.851560 m 0.0001 303 | 3/23
7 h-m-p 0.0000 0.0000 2721.6781 ++ 2302.486450 m 0.0000 350 | 4/23
8 h-m-p 0.0000 0.0000 1153.1708 ++ 2292.343215 m 0.0000 396 | 5/23
9 h-m-p 0.0001 0.0004 310.7765 +CYCCC 2279.564295 4 0.0004 449 | 5/23
10 h-m-p 0.0000 0.0002 1532.2088 YCYCCC 2265.089777 5 0.0001 501 | 5/23
11 h-m-p 0.0001 0.0003 593.8866 CYCCCC 2260.869442 5 0.0001 554 | 5/23
12 h-m-p 0.0007 0.0035 50.4089 YCC 2260.439206 2 0.0003 601 | 4/23
13 h-m-p 0.0000 0.0005 448.0494 YCYCCC 2259.855554 5 0.0000 653 | 4/23
14 h-m-p 0.0003 0.0075 24.9327 +CCCCC 2258.863622 4 0.0017 707 | 4/23
15 h-m-p 0.0001 0.0006 95.6143 +YYCCCC 2257.862389 5 0.0004 761 | 4/23
16 h-m-p 0.0004 0.0019 69.4032 CCCC 2257.334055 3 0.0005 812 | 4/23
17 h-m-p 0.0007 0.0148 46.1408 +YCCC 2254.376654 3 0.0049 863 | 4/23
18 h-m-p 0.0004 0.0021 144.6634 CCC 2253.150807 2 0.0007 912 | 4/23
19 h-m-p 0.0009 0.0044 66.4809 YCCC 2252.910419 3 0.0004 962 | 4/23
20 h-m-p 0.0040 0.0320 6.1706 YC 2252.896710 1 0.0008 1008 | 4/23
21 h-m-p 0.0010 0.0448 4.6872 YC 2252.892321 1 0.0005 1054 | 4/23
22 h-m-p 0.0011 0.3499 2.3214 +YC 2252.864661 1 0.0091 1101 | 4/23
23 h-m-p 0.0008 0.0739 25.2321 +YCC 2252.661236 2 0.0061 1150 | 4/23
24 h-m-p 0.2286 1.9150 0.6711 YCCC 2252.218373 3 0.4130 1200 | 4/23
25 h-m-p 0.5228 2.6138 0.2472 CCCC 2251.846478 3 0.5572 1251 | 4/23
26 h-m-p 0.9264 8.0000 0.1487 CC 2251.768085 1 1.3783 1298 | 4/23
27 h-m-p 0.7469 8.0000 0.2744 CYC 2251.701320 2 0.8715 1346 | 4/23
28 h-m-p 1.2110 8.0000 0.1975 YCC 2251.567789 2 2.5129 1394 | 4/23
29 h-m-p 0.9530 5.6431 0.5207 CCC 2251.420780 2 1.0541 1443 | 4/23
30 h-m-p 1.6000 8.0000 0.3032 CCC 2251.324165 2 1.9692 1492 | 4/23
31 h-m-p 1.6000 8.0000 0.2326 +YC 2251.227534 1 4.7316 1539 | 4/23
32 h-m-p 0.8715 4.3575 0.7603 +YYC 2250.910131 2 3.1927 1587 | 4/23
33 h-m-p 0.6141 3.0706 1.1858 YC 2250.772939 1 1.4722 1633 | 4/23
34 h-m-p 1.6000 8.0000 0.2465 CCC 2250.749095 2 0.5573 1682 | 4/23
35 h-m-p 0.1157 2.6633 1.1874 ++YC 2250.700616 1 1.2445 1730 | 4/23
36 h-m-p 1.4033 7.0165 0.5698 YC 2250.675059 1 2.5903 1776 | 4/23
37 h-m-p 1.6000 8.0000 0.3822 +CC 2250.642150 1 5.5469 1824 | 4/23
38 h-m-p 1.6000 8.0000 0.5868 +CC 2250.564270 1 5.5654 1872 | 4/23
39 h-m-p 0.2035 1.0177 1.4543 ++ 2250.543062 m 1.0177 1917 | 4/23
40 h-m-p 0.8197 8.0000 1.8056 YCC 2250.532761 2 1.3495 1965 | 4/23
41 h-m-p 0.0516 0.2580 1.7995 ++ 2250.530982 m 0.2580 2010 | 5/23
42 h-m-p 0.0262 4.3379 17.7023 +C 2250.528119 0 0.1164 2056 | 5/23
43 h-m-p 1.6000 8.0000 0.3933 CC 2250.525809 1 1.9789 2102 | 5/23
44 h-m-p 1.6000 8.0000 0.4561 YC 2250.524734 1 2.7741 2147 | 5/23
45 h-m-p 1.6000 8.0000 0.4197 +YC 2250.521848 1 7.1920 2193 | 5/23
46 h-m-p 1.6000 8.0000 0.5710 YC 2250.518796 1 2.8866 2238 | 5/23
47 h-m-p 1.6000 8.0000 0.0304 C 2250.518185 0 1.6311 2282 | 5/23
48 h-m-p 0.6779 8.0000 0.0732 Y 2250.518157 0 1.2996 2326 | 5/23
49 h-m-p 1.6000 8.0000 0.0182 +Y 2250.518144 0 7.0058 2371 | 5/23
50 h-m-p 1.6000 8.0000 0.0009 ++ 2250.518022 m 8.0000 2415 | 5/23
51 h-m-p 0.0160 8.0000 0.5229 +++CC 2250.517464 1 1.5216 2464 | 5/23
52 h-m-p 1.4695 8.0000 0.5414 YC 2250.517204 1 2.5528 2509 | 5/23
53 h-m-p 1.6000 8.0000 0.1527 C 2250.517199 0 1.4866 2553 | 5/23
54 h-m-p 1.6000 8.0000 0.0171 Y 2250.517199 0 1.1853 2597 | 5/23
55 h-m-p 1.6000 8.0000 0.0000 C 2250.517199 0 0.4789 2641 | 5/23
56 h-m-p 0.0160 8.0000 0.0039 -------C 2250.517199 0 0.0000 2692 | 5/23
57 h-m-p 0.0160 8.0000 0.0001 ---C 2250.517199 0 0.0001 2739 | 5/23
58 h-m-p 0.0160 8.0000 0.0001 ---------C 2250.517199 0 0.0000 2792
Out..
lnL = -2250.517199
2793 lfun, 33516 eigenQcodon, 553014 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -2274.662848 S = -2195.916348 -107.454811
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 188 patterns 8:02
did 20 / 188 patterns 8:03
did 30 / 188 patterns 8:03
did 40 / 188 patterns 8:03
did 50 / 188 patterns 8:03
did 60 / 188 patterns 8:03
did 70 / 188 patterns 8:04
did 80 / 188 patterns 8:04
did 90 / 188 patterns 8:04
did 100 / 188 patterns 8:04
did 110 / 188 patterns 8:04
did 120 / 188 patterns 8:04
did 130 / 188 patterns 8:05
did 140 / 188 patterns 8:05
did 150 / 188 patterns 8:05
did 160 / 188 patterns 8:05
did 170 / 188 patterns 8:05
did 180 / 188 patterns 8:06
did 188 / 188 patterns 8:06end of tree file.
Time used: 8:06
The loglikelihoods for models M1, M2, M7 and M8 are -2250.594913 -2250.594913 -2252.361068 -2250.517199 respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
171_1ab_VIPR_ALG1_422313312_19512_20411_1_1971_Germany_Dog_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLCQYLNTTTVCV
79_1146_ORF_1a_1b_VIPR_P_62836706_19537_20439_1_NA_USA_Unknown_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLCQYLNTTTVCV
A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCV
Black_1_VIPR_P_161213709_19505_20404_1_NA_USA_Unknown_Alphacoronavirus_1 SSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCV
DF_2_NA_VIPR_P_87242672_19531_20433_1_NA_NA_Unknown_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTRLCQYLNTTTVCV
FCoV_C1Je_NA_VIPR_ALG1_112253724_19489_20388_1_NA_NA_Unknown_Alphacoronavirus_1 SSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCV
FIPV_79_1146_NA_VIPR_ALG1_63098797_19307_20206_1_NA_NA_Cat_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLCQYLNTTTVCV
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_19352_20251_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 SSVWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCV
K378_1ab_VIPR_ALG1_422313320_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCV
S378_1ab_VIPR_ALG1_422313331_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCV
UNKNOWN_AX154950_NA_VIPR_P_14536504_19466_20368_1_NA_NA_Unknown_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPVGITTKFVKYTQLCQYLNTTTLCV
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_19441_20343_1_1987_USA_Swine_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCV
*: ******************************:** ****:.****:*********:**
171_1ab_VIPR_ALG1_422313312_19512_20411_1_1971_Germany_Dog_Alphacoronavirus_1 PHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIE
79_1146_ORF_1a_1b_VIPR_P_62836706_19537_20439_1_NA_USA_Unknown_Alphacoronavirus_1 PHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIE
A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1 PHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIE
Black_1_VIPR_P_161213709_19505_20404_1_NA_USA_Unknown_Alphacoronavirus_1 PHKMRVLHLGAAGANGVAPGTTVLKRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIE
DF_2_NA_VIPR_P_87242672_19531_20433_1_NA_NA_Unknown_Alphacoronavirus_1 PHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIE
FCoV_C1Je_NA_VIPR_ALG1_112253724_19489_20388_1_NA_NA_Unknown_Alphacoronavirus_1 PHKMRVLHLGAAGANGVAPGTTVLRRWLPDDAILVDNDMRDYVSDADFSFTGDCTNLYIE
FIPV_79_1146_NA_VIPR_ALG1_63098797_19307_20206_1_NA_NA_Cat_Alphacoronavirus_1 PHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIE
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_19352_20251_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 PHKMRVLHLGAAGANGVAPGTTVLKRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIE
K378_1ab_VIPR_ALG1_422313320_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 PHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIE
S378_1ab_VIPR_ALG1_422313331_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 PHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIE
UNKNOWN_AX154950_NA_VIPR_P_14536504_19466_20368_1_NA_NA_Unknown_Alphacoronavirus_1 PHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIE
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_19441_20343_1_1987_USA_Swine_Alphacoronavirus_1 PHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIE
**************.*****:***:*************:**********.*****.****
171_1ab_VIPR_ALG1_422313312_19512_20411_1_1971_Germany_Dog_Alphacoronavirus_1 DKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLY
79_1146_ORF_1a_1b_VIPR_P_62836706_19537_20439_1_NA_USA_Unknown_Alphacoronavirus_1 DKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLY
A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1 DKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLY
Black_1_VIPR_P_161213709_19505_20404_1_NA_USA_Unknown_Alphacoronavirus_1 DKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLY
DF_2_NA_VIPR_P_87242672_19531_20433_1_NA_NA_Unknown_Alphacoronavirus_1 DKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLY
FCoV_C1Je_NA_VIPR_ALG1_112253724_19489_20388_1_NA_NA_Unknown_Alphacoronavirus_1 DKFDLLISDLYDGSTKSIDGENISKDGFFTYINGFINEKLALGGSVAIKITEFSWNKILY
FIPV_79_1146_NA_VIPR_ALG1_63098797_19307_20206_1_NA_NA_Cat_Alphacoronavirus_1 DKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLY
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_19352_20251_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 DKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKTLY
K378_1ab_VIPR_ALG1_422313320_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 DKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLY
S378_1ab_VIPR_ALG1_422313331_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 DKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLY
UNKNOWN_AX154950_NA_VIPR_P_14536504_19466_20368_1_NA_NA_Unknown_Alphacoronavirus_1 DKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLY
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_19441_20343_1_1987_USA_Swine_Alphacoronavirus_1 DKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLY
******:*************** *************:***:****.*********** **
171_1ab_VIPR_ALG1_422313312_19512_20411_1_1971_Germany_Dog_Alphacoronavirus_1 ELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMAL
79_1146_ORF_1a_1b_VIPR_P_62836706_19537_20439_1_NA_USA_Unknown_Alphacoronavirus_1 ELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMAL
A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1 ELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMAL
Black_1_VIPR_P_161213709_19505_20404_1_NA_USA_Unknown_Alphacoronavirus_1 ELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMAL
DF_2_NA_VIPR_P_87242672_19531_20433_1_NA_NA_Unknown_Alphacoronavirus_1 ELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMAL
FCoV_C1Je_NA_VIPR_ALG1_112253724_19489_20388_1_NA_NA_Unknown_Alphacoronavirus_1 ELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGLYCDKAVVDGNIMHANYIFWRNSTIMAL
FIPV_79_1146_NA_VIPR_ALG1_63098797_19307_20206_1_NA_NA_Cat_Alphacoronavirus_1 ELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMAL
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_19352_20251_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 ELIQRFEYWTVFCTSVNTSSSEGFLVGINYLGPYSDKAIVDGNIMHANYIFWRNSTIMAL
K378_1ab_VIPR_ALG1_422313320_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 ELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCEKAIVDGNIMHANYIFWRNSTIMSL
S378_1ab_VIPR_ALG1_422313331_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 ELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCEKAIVDGNIMHANYIFWRNSTIMSL
UNKNOWN_AX154950_NA_VIPR_P_14536504_19466_20368_1_NA_NA_Unknown_Alphacoronavirus_1 ELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMAL
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_19441_20343_1_1987_USA_Swine_Alphacoronavirus_1 ELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMAL
*************************:****** *.:**:*******************:*
171_1ab_VIPR_ALG1_422313312_19512_20411_1_1971_Germany_Dog_Alphacoronavirus_1 SHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
79_1146_ORF_1a_1b_VIPR_P_62836706_19537_20439_1_NA_USA_Unknown_Alphacoronavirus_1 SHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1 SHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHFVNTP
Black_1_VIPR_P_161213709_19505_20404_1_NA_USA_Unknown_Alphacoronavirus_1 SHNSVLDTPKFKCRCNNALVVNLKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP
DF_2_NA_VIPR_P_87242672_19531_20433_1_NA_NA_Unknown_Alphacoronavirus_1 SHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
FCoV_C1Je_NA_VIPR_ALG1_112253724_19489_20388_1_NA_NA_Unknown_Alphacoronavirus_1 SHNSVLDTPKFKCRCNNALVVNLKERELNDMVVGLLRKGKILIRNNGKLLNFGNHFVNTP
FIPV_79_1146_NA_VIPR_ALG1_63098797_19307_20206_1_NA_NA_Cat_Alphacoronavirus_1 SHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_19352_20251_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 SHNSVLDTPKFKCRCNNALVVNLKERELNDMVVGLLRKGKILIRNNGKLLNFGNHFVNTP
K378_1ab_VIPR_ALG1_422313320_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 SHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
S378_1ab_VIPR_ALG1_422313331_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 SHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
UNKNOWN_AX154950_NA_VIPR_P_14536504_19466_20368_1_NA_NA_Unknown_Alphacoronavirus_1 SHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_19441_20343_1_1987_USA_Swine_Alphacoronavirus_1 SHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
*******************:*****:***:**:*******:**************:**.*
>171_1ab_VIPR_ALG1_422313312_19512_20411_1_1971_Germany_Dog_Alphacoronavirus_1 TCTGCTGAATGGAACCCTGGCTATAGCATGCCTACATTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAGATTACCTGATGGCATTACTACTAATGTTGTTAAGTATACTCAATTGTGTCAATACCTTAACACTACTACTGTGTGTGTACCACACAAAATGCGAGTTCTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTGTTACGAAGGTGGTTACCAGACGATGCCATATTGGTTGATAACGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAATTTGATTTGCTTATCTCTGATTTATATGATGGTTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTATCACTTGGTGGATCTGCTGCCATCAAAATCACAGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAATACGTCATCATCAGAAGGTTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCAAAATTTAAGTGCCGTTGTAACAATGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCGTTGGATTACTAAGGAAGGGTAAGTTACTCATTAGAAATAATGGCAAGCTACTAAACTTTGGTAATCATTTAGTTAATGTGCCA >79_1146_ORF_1a_1b_VIPR_P_62836706_19537_20439_1_NA_USA_Unknown_Alphacoronavirus_1 TCTGCTGAATGGAACCCTGGCTATAGCATGCCTACATTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAGATTACCTGATGGCATTACTACTAATGTTGTTAAGTATACTCAATTGTGTCAATACCTTAACACTACTACTGTGTGTGTACCACACAAAATGCGAGTTCTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTGTTACGAAGGTGGTTACCAGACGATGCCATATTGGTTGATAACGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAATTTGATTTGCTTATCTCTGATTTATATGATGGTTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTATCACTTGGTGGATCTGCTGCCATCAAAATCACAGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAATACGTCATCATCAGAAGGTTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCAAAATTTAAGTGCCGTTGTAACAATGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCGTTGGATTACTAAGGAAGGGTAAGTTACTCATTAGAAATAATGGCAAGCTACTAAACTTTGGTAATCATTTAGTTAATGTGCCA >A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1 TCTGCTGAATGGAACCCTGGCTATAGCATGCCTACATTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACTACTAATGTCGTTAAGTATACTCAATTGTGTCAATACCTTAACACTACTACTTTGTGTGTACCACACAAAATGCGAGTCTTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGACGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAGGACAAATTTGATTTGCTTATCTCTGATTTGTATGATGGCTCCACAAAGTCAATTGACGGTGAAAATACGTCAAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTATCACTTGGTGGATCTGCTGCCATCAAAATCACAGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAATACATCATCATCAGAAGGTTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGGCTCTATCACACAACTCAGTCCTAGATACTCCAAAATTTAAGTGCCGTTGTAACAATGCACTTATTGTTAATTTAAAAGAAAAAGAATTAAATGAAATGGTCGTTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAATCACTTTGTTAATACACCA >Black_1_VIPR_P_161213709_19505_20404_1_NA_USA_Unknown_Alphacoronavirus_1 TCTTCCGAGTGGAATCCAGGCTATAGCATGCCTACACTTTACAAAATACAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAGTTACCTGACGGCATTACTACTAATGTCGTTAAGTATACCCAGTTGTGTCAATACCTCAATACCACTACACTATGTGTTCCACATAAAATGCGTGTTCTGCATTTAGGAGCAGCAGGTGCTAATGGTGTTGCTCCTGGTACTACCGTATTAAAAAGATGGTTGCCAGATGATGCCATATTGGTTGATAATGATATGAGAGATTATGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAACCTCTATATTGAGGATAAATTTGATTTGCTTATATCTGATTTGTATGATGGTTCCACCAAGTCTATAGATGGTGAAAACACGTCTAAGGATGGCTTCTTTACATACATTAATGGTTTCATTAATGAGAAGCTAGCGCTTGGAGGTTCTGTTGCCATCAAAATCACTGAATTTAGTTGGAATAAAAGTTTATATGAATTAATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACCTCGTCATCAGAAGGTTTCCTGATAGGTATTAACTACTTGGGACCATACTGTGACAAGGCTATAGTGGATGGTAATATAATGCATGCCAATTATATATTTTGGAGAAACTCCACAATCATGGCATTGTCACATAACTCAGTTCTAGATACTCCCAAATTTAAGTGTCGTTGTAACAACGCACTTGTTGTTAATTTAAAAGAAAGAGAATTAAATGACATGGTTATTGGATTGCTAAGGAAGGGTAAAATACTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAATCACTTTGTTAACACACCA >DF_2_NA_VIPR_P_87242672_19531_20433_1_NA_NA_Unknown_Alphacoronavirus_1 TCTGCTGAATGGAACCCTGGCTATAGCATGCCTACATTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAGATTACCTGATGGCATTACTACTAATGTTGTTAAGTATACTCGATTGTGTCAATACCTTAACACTACTACTGTGTGTGTACCACACAAAATGCGAGTTCTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTGTTACGAAGGTGGTTACCAGACGATGCCATATTGGTTGATAACGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAATTTGATTTGCTTATCTCTGATTTATATGATGGTTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTATCACTTGGTGGATCTGCTGCCATCAAAATCACAGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAATACGTCATCATCAGAAGGTTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCAAAATTTAAGTGCCGTTGTAACAATGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCGTTGGATTACTAAGGAAGGGTAAGTTACTCATTAGAAATAATGGCAAGCTACTAAACTTTGGTAATCATTTAGTTAATGTGCCA >FCoV_C1Je_NA_VIPR_ALG1_112253724_19489_20388_1_NA_NA_Unknown_Alphacoronavirus_1 TCTTCTGAGTGGAATCCAGGCTATAGCATGCCTACACTTTACAAAATACAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAGTTACCTGACGGCATTACTACTAATGTCGTTAAGTATACTCAGTTGTGTCAATACCTCAACACCACTACACTGTGTGTTCCACATAAAATGCGTGTTCTGCACTTAGGAGCTGCAGGTGCTAATGGTGTTGCCCCTGGAACCACTGTATTAAGAAGGTGGCTGCCAGATGATGCCATATTGGTTGATAATGATATGAGGGATTACGTTTCCGACGCGGACTTCAGTTTTACAGGTGATTGTACTAATCTTTATATTGAGGACAAATTTGATTTGCTTATATCTGATTTATATGATGGCTCCACCAAGTCTATAGATGGTGAGAATATATCCAAAGATGGCTTCTTTACATATATTAATGGTTTTATTAATGAGAAGCTAGCGCTTGGAGGTTCTGTTGCCATCAAAATCACTGAATTTAGTTGGAATAAAATTTTATATGAATTAATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAATACATCGTCATCGGAAGGTTTTCTGATAGGTATTAACTACTTAGGACTATATTGTGACAAAGCTGTTGTGGACGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCATTGTCACATAATTCAGTTCTAGATACTCCGAAATTCAAGTGCCGCTGTAATAACGCACTTGTTGTTAATTTAAAAGAAAGAGAGTTAAATGATATGGTTGTTGGATTACTAAGGAAGGGTAAAATACTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAATCACTTCGTCAACACACCA >FIPV_79_1146_NA_VIPR_ALG1_63098797_19307_20206_1_NA_NA_Cat_Alphacoronavirus_1 TCTGCTGAATGGAACCCTGGCTATAGCATGCCTACATTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAGATTACCTGATGGCATTACTACTAATGTTGTTAAGTATACTCAATTGTGTCAATACCTTAACACTACTACTGTGTGTGTACCACACAAAATGCGAGTTCTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTGTTACGAAGGTGGTTACCAGACGATGCCATATTGGTTGATAACGATTTGAGAGATTACGTTTCCGACGCTGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAATTTGATTTGCTTATCTCTGATTTATATGATGGTTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTATCACTTGGTGGATCTGCTGCCATCAAAATCACAGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAATACGTCATCATCAGAAGGTTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCAAAATTTAAGTGCCGTTGTAACAATGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCGTTGGATTACTAAGGAAGGGTAAGTTACTCATTAGAAATAATGGCAAGCTACTAAACTTTGGTAATCATTTAGTTAATGTGCCA >Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_19352_20251_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 TCTTCTGTGTGGAATCCAGGCTATAGCATGCCTACACTTTACAAAATACAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAGTTACCTGACGGCATTACTACTAATGTCGTTAAGTACACCCAGTTGTGTCAATACCTCAATACCACTACACTGTGTGTTCCACACAAAATGCGTGTTCTGCATTTAGGAGCAGCAGGTGCTAATGGTGTTGCTCCTGGTACCACCGTATTAAAGAGATGGTTGCCAGATGATGCCATATTGGTTGACAACGATATGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGACTGTACTAACCTCTATATTGAGGATAAATTTGATTTACTTATATCTGATTTATATGATGGCTCAACCAAGTCTATAGACGGTGAAAACACTTCGAAAGATGGCTTCTTTACATACATTAATGGTTTTATCAATGAGAAGCTAGCGCTTGGAGGTTCTGTTGCCATCAAAATCACTGAATTTAGTTGGAATAAAACTTTATATGAATTAATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACCTCGTCATCAGAAGGTTTTCTGGTAGGTATTAACTACTTAGGACCATACAGTGACAAGGCTATAGTGGATGGCAATATAATGCATGCCAATTATATATTTTGGAGAAACTCCACAATTATGGCATTGTCACACAATTCAGTCCTAGATACTCCGAAATTTAAGTGTCGTTGTAACAACGCACTTGTTGTTAATTTAAAAGAAAGAGAATTAAATGATATGGTTGTTGGATTGCTAAGGAAGGGTAAAATACTCATTAGAAACAATGGTAAGTTACTAAACTTTGGTAATCACTTTGTTAACACACCA >K378_1ab_VIPR_ALG1_422313320_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 TCTGCTGAATGGAATCCTGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAACTACCTGATGGCATTACTACTAATGTCGTTAAGTATACCCAGTTGTGTCAATACCTTAACACTACTACTTTGTGTGTACCACACAAAATGCGAGTCTTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGGTGGTTACCAGATGATGCCATATTGGTTGATAACGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAGTTTGATTTGCTTATCTCTGATTTATATGACGGCTCCACAAAGTCAATTGACGGTGAAAATACGTCAAAGGATGGTTTCTTTACTTATATCAATGGTTTTATTAAAGAGAAGCTATCACTTGGTGGGTCTGCTGCCATTAAAATCACAGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACCTCATCGTCAGAAGGTTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGAAAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGTCTCTATCACATAATTCAGTCCTAGATACTCCCAAGTTTAAGTGCCGGTGTAATAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTTGTTGGATTACTAAGGAAAGGTAAGTTGCTCATTAGAAACAATGGAAAACTACTAAACTTTGGTAATCACTTGGTTAATGTGCCA >S378_1ab_VIPR_ALG1_422313331_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 TCTGCTGAATGGAATCCTGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAACTACCTGATGGCATTACTACTAATGTCGTTAAGTATACCCAGTTGTGTCAATACCTTAACACTACTACTTTGTGTGTACCACACAAAATGCGAGTCTTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGGTGGTTACCAGATGATGCCATATTGGTTGATAACGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAGTTTGATTTGCTTATCTCTGATTTATATGACGGCTCCACAAAGTCAATTGACGGTGAAAATACGTCAAAGGATGGTTTCTTTACTTATATCAATGGTTTTATTAAAGAGAAGCTATCACTTGGTGGGTCTGCTGCCATTAAAATCACAGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACCTCATCGTCAGAAGGTTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGAAAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGTCTCTATCACATAATTCAGTCCTAGATACTCCCAAGTTTAAGTGCCGGTGTAATAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTTGTTGGATTACTAAGGAAAGGTAAGTTGCTCATTAGAAACAATGGAAAACTACTAAACTTTGGTAATCACTTGGTTAATGTGCCA >UNKNOWN_AX154950_NA_VIPR_P_14536504_19466_20368_1_NA_NA_Unknown_Alphacoronavirus_1 TCTGCTGAATGGAATCCCGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGTAGGCATTACTACTAAGTTCGTTAAGTATACTCAGTTGTGTCAATACCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATCGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATATGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAACACACCA >partially_attenuated_Miller_M60_NA_VIPR_P_110746810_19441_20343_1_1987_USA_Swine_Alphacoronavirus_1 TCTGCTGAATGGAACCCCGGTTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACTACTAATGTCGTTAAGTATACTCAGTTGTGTCAATACCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGATAAGTTTGATTTGCTCGTTTCTGATTTATATGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCCGTTGCCATTAAAATCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAACACACCA
>171_1ab_VIPR_ALG1_422313312_19512_20411_1_1971_Germany_Dog_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLCQYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP >79_1146_ORF_1a_1b_VIPR_P_62836706_19537_20439_1_NA_USA_Unknown_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLCQYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP >A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHFVNTP >Black_1_VIPR_P_161213709_19505_20404_1_NA_USA_Unknown_Alphacoronavirus_1 SSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLKRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVNLKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP >DF_2_NA_VIPR_P_87242672_19531_20433_1_NA_NA_Unknown_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTRLCQYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP >FCoV_C1Je_NA_VIPR_ALG1_112253724_19489_20388_1_NA_NA_Unknown_Alphacoronavirus_1 SSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLRRWLPDDAILVDNDMRDYVSDADFSFTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENISKDGFFTYINGFINEKLALGGSVAIKITEFSWNKILYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGLYCDKAVVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVNLKERELNDMVVGLLRKGKILIRNNGKLLNFGNHFVNTP >FIPV_79_1146_NA_VIPR_ALG1_63098797_19307_20206_1_NA_NA_Cat_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLCQYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP >Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_19352_20251_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 SSVWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLKRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKTLYELIQRFEYWTVFCTSVNTSSSEGFLVGINYLGPYSDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVNLKERELNDMVVGLLRKGKILIRNNGKLLNFGNHFVNTP >K378_1ab_VIPR_ALG1_422313320_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCEKAIVDGNIMHANYIFWRNSTIMSLSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP >S378_1ab_VIPR_ALG1_422313331_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCEKAIVDGNIMHANYIFWRNSTIMSLSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP >UNKNOWN_AX154950_NA_VIPR_P_14536504_19466_20368_1_NA_NA_Unknown_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPVGITTKFVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >partially_attenuated_Miller_M60_NA_VIPR_P_110746810_19441_20343_1_1987_USA_Swine_Alphacoronavirus_1 SAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
Reading sequence file /data//pss_subsets/A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1.result/original_alignment/codeml/fasta/A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1.result.1
Found 12 sequences of length 900
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 7.1%
Found 127 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0% 95.6%100.0%
Using a window size of 80 with k as 11
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 113 polymorphic sites
**p-Value(s)**
----------
NSS: 7.30e-02 (1000 permutations)
Max Chi^2: 4.65e-01 (1000 permutations)
PHI (Permutation): 3.82e-01 (1000 permutations)
PHI (Normal): 3.63e-01
#NEXUS
[ID: 7131105723]
begin taxa;
dimensions ntax=12;
taxlabels
171_1ab_VIPR_ALG1_422313312_19512_20411_1_1971_Germany_Dog_Alphacoronavirus_1
S378_1ab_VIPR_ALG1_422313331_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1
UNKNOWN_AX154950_NA_VIPR_P_14536504_19466_20368_1_NA_NA_Unknown_Alphacoronavirus_1
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_19441_20343_1_1987_USA_Swine_Alphacoronavirus_1
79_1146_ORF_1a_1b_VIPR_P_62836706_19537_20439_1_NA_USA_Unknown_Alphacoronavirus_1
A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1
Black_1_VIPR_P_161213709_19505_20404_1_NA_USA_Unknown_Alphacoronavirus_1
DF_2_NA_VIPR_P_87242672_19531_20433_1_NA_NA_Unknown_Alphacoronavirus_1
FCoV_C1Je_NA_VIPR_ALG1_112253724_19489_20388_1_NA_NA_Unknown_Alphacoronavirus_1
FIPV_79_1146_NA_VIPR_ALG1_63098797_19307_20206_1_NA_NA_Cat_Alphacoronavirus_1
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_19352_20251_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1
K378_1ab_VIPR_ALG1_422313320_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1
;
end;
begin trees;
translate
1 171_1ab_VIPR_ALG1_422313312_19512_20411_1_1971_Germany_Dog_Alphacoronavirus_1,
2 S378_1ab_VIPR_ALG1_422313331_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1,
3 UNKNOWN_AX154950_NA_VIPR_P_14536504_19466_20368_1_NA_NA_Unknown_Alphacoronavirus_1,
4 partially_attenuated_Miller_M60_NA_VIPR_P_110746810_19441_20343_1_1987_USA_Swine_Alphacoronavirus_1,
5 79_1146_ORF_1a_1b_VIPR_P_62836706_19537_20439_1_NA_USA_Unknown_Alphacoronavirus_1,
6 A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1,
7 Black_1_VIPR_P_161213709_19505_20404_1_NA_USA_Unknown_Alphacoronavirus_1,
8 DF_2_NA_VIPR_P_87242672_19531_20433_1_NA_NA_Unknown_Alphacoronavirus_1,
9 FCoV_C1Je_NA_VIPR_ALG1_112253724_19489_20388_1_NA_NA_Unknown_Alphacoronavirus_1,
10 FIPV_79_1146_NA_VIPR_ALG1_63098797_19307_20206_1_NA_NA_Cat_Alphacoronavirus_1,
11 Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_19352_20251_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1,
12 K378_1ab_VIPR_ALG1_422313320_19421_20320_1_1978_USA_Dog_Alphacoronavirus_1
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:1.109641e-03,5:1.108015e-03,8:2.618303e-03,10:2.576443e-03,((2:1.062100e-03,12:1.101107e-03)1.000:6.827283e-02,((3:1.193791e-02,4:6.986469e-03)0.981:3.059289e-02,((7:3.333897e-02,11:3.788771e-02)0.922:3.129170e-02,9:7.160998e-02)1.000:2.405169e-01)0.821:2.297610e-02,6:1.623297e-02)1.000:3.449130e-02);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:1.109641e-03,5:1.108015e-03,8:2.618303e-03,10:2.576443e-03,((2:1.062100e-03,12:1.101107e-03):6.827283e-02,((3:1.193791e-02,4:6.986469e-03):3.059289e-02,((7:3.333897e-02,11:3.788771e-02):3.129170e-02,9:7.160998e-02):2.405169e-01):2.297610e-02,6:1.623297e-02):3.449130e-02);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2372.32 -2388.17
2 -2372.26 -2388.42
--------------------------------------
TOTAL -2372.29 -2388.30
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.653972 0.007728 0.489211 0.826482 0.647555 1153.48 1173.11 1.000
r(A<->C){all} 0.039151 0.000296 0.007459 0.072278 0.037306 831.72 849.96 1.000
r(A<->G){all} 0.271796 0.001990 0.191743 0.359718 0.270352 799.18 826.62 1.002
r(A<->T){all} 0.049871 0.000169 0.024782 0.074535 0.048647 921.05 1090.10 1.001
r(C<->G){all} 0.026005 0.000323 0.000239 0.061663 0.023120 792.21 813.60 1.000
r(C<->T){all} 0.577163 0.002604 0.482769 0.679538 0.578089 717.84 752.38 1.002
r(G<->T){all} 0.036015 0.000197 0.011981 0.064879 0.034433 908.52 927.62 1.000
pi(A){all} 0.312353 0.000220 0.282297 0.340560 0.312235 1111.34 1188.42 1.000
pi(C){all} 0.161779 0.000124 0.141540 0.184300 0.161479 1174.35 1179.88 1.000
pi(G){all} 0.198559 0.000173 0.171646 0.222606 0.198149 1054.67 1162.38 1.000
pi(T){all} 0.327309 0.000218 0.298656 0.355812 0.327208 1127.29 1182.67 1.000
alpha{1,2} 0.119615 0.001122 0.054998 0.193833 0.120255 894.53 938.47 1.000
alpha{3} 3.794467 2.273703 1.449325 7.042519 3.555222 1106.25 1232.97 1.000
pinvar{all} 0.485423 0.003415 0.363468 0.592030 0.491663 828.38 986.29 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/A76_1ab_VIPR_ALG1_418470985_19425_20324_1_1976_USA_Dog_Alphacoronavirus_1.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 12 ls = 300
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 9 9 10 9 9 10 | Ser TCT 5 5 5 5 5 6 | Tyr TAT 8 8 8 9 8 10 | Cys TGT 8 8 8 9 8 8
TTC 3 3 3 4 3 4 | TCC 2 2 2 4 2 3 | TAC 7 7 7 6 7 5 | TGC 1 1 1 0 1 1
Leu TTA 11 11 10 8 11 11 | TCA 7 7 8 4 7 3 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 7 7 10 8 7 4 | TCG 1 1 0 1 1 2 | TAG 0 0 0 0 0 0 | Trp TGG 5 5 5 5 5 5
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 5 5 5 4 5 5 | Pro CCT 4 4 4 3 4 3 | His CAT 4 4 2 4 4 3 | Arg CGT 2 2 2 3 2 2
CTC 3 3 3 5 3 4 | CCC 0 0 0 1 0 0 | CAC 1 1 3 1 1 2 | CGC 0 0 0 0 0 1
CTA 6 6 5 5 6 5 | CCA 5 5 5 5 5 4 | Gln CAA 4 4 4 3 3 3 | CGA 2 2 1 0 3 0
CTG 2 2 1 2 2 4 | CCG 0 0 0 0 0 1 | CAG 1 1 1 2 1 2 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 11 11 11 8 11 9 | Thr ACT 11 11 11 8 11 9 | Asn AAT 15 15 18 17 15 21 | Ser AGT 5 5 5 4 5 3
ATC 4 4 4 3 4 2 | ACC 0 0 0 5 0 3 | AAC 9 9 6 10 9 6 | AGC 1 1 1 1 1 1
ATA 4 4 4 9 4 9 | ACA 6 6 8 7 6 8 | Lys AAA 13 13 13 9 13 10 | Arg AGA 5 5 6 6 5 5
Met ATG 6 6 6 7 6 7 | ACG 2 2 1 1 2 0 | AAG 5 5 6 9 5 7 | AGG 2 2 1 1 2 3
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 11 11 9 14 11 14 | Ala GCT 6 6 6 3 6 3 | Asp GAT 12 12 13 14 12 13 | Gly GGT 14 14 14 15 14 12
GTC 2 2 4 1 2 2 | GCC 3 3 3 3 3 4 | GAC 7 7 6 5 7 6 | GGC 3 3 3 3 3 4
GTA 2 2 3 1 2 1 | GCA 5 5 5 6 5 4 | Glu GAA 10 10 9 7 10 5 | GGA 5 5 5 4 5 6
GTG 5 5 2 3 5 3 | GCG 0 0 0 1 0 2 | GAG 2 2 3 4 2 6 | GGG 0 0 0 0 0 0
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 9 11 10 10 8 8 | Ser TCT 5 5 6 6 5 4 | Tyr TAT 8 7 8 8 8 8 | Cys TGT 8 8 8 8 9 9
TTC 3 2 2 2 6 5 | TCC 2 2 2 2 2 3 | TAC 7 8 7 7 7 7 | TGC 1 0 1 1 0 0
Leu TTA 11 11 8 8 10 10 | TCA 7 5 7 7 7 7 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 7 5 10 10 9 9 | TCG 1 2 1 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 5 5 5 5 5 5
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 5 4 5 5 4 4 | Pro CCT 4 3 4 4 4 4 | His CAT 4 2 3 3 3 3 | Arg CGT 2 3 1 1 3 3
CTC 3 5 3 3 4 4 | CCC 0 0 1 1 1 1 | CAC 1 3 2 2 2 2 | CGC 0 0 0 0 0 0
CTA 6 4 7 7 4 4 | CCA 5 5 4 4 4 4 | Gln CAA 4 3 3 3 3 3 | CGA 2 0 1 1 0 0
CTG 2 3 2 2 3 3 | CCG 0 1 0 0 0 0 | CAG 1 2 2 2 2 2 | CGG 1 1 2 2 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 11 7 11 11 12 13 | Thr ACT 11 9 10 10 10 10 | Asn AAT 15 16 17 17 12 12 | Ser AGT 5 4 5 5 5 5
ATC 4 3 4 4 3 2 | ACC 0 6 2 2 0 0 | AAC 9 11 7 7 11 12 | AGC 1 1 1 1 1 1
ATA 4 8 4 4 4 4 | ACA 6 7 6 6 7 7 | Lys AAA 13 9 11 11 13 13 | Arg AGA 5 6 5 5 6 6
Met ATG 6 7 6 6 6 6 | ACG 2 0 1 1 3 3 | AAG 5 9 8 8 7 6 | AGG 2 1 2 2 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 11 14 10 10 9 10 | Ala GCT 7 3 5 5 5 5 | Asp GAT 12 12 13 13 12 14 | Gly GGT 14 13 13 13 13 14
GTC 2 2 3 3 3 3 | GCC 3 3 3 3 3 3 | GAC 7 7 5 5 6 5 | GGC 3 5 3 3 4 3
GTA 2 2 3 3 5 4 | GCA 4 6 5 5 5 5 | Glu GAA 10 7 11 11 10 10 | GGA 5 4 5 5 5 5
GTG 5 4 3 3 2 2 | GCG 0 1 0 0 0 0 | GAG 2 3 2 2 2 2 | GGG 0 0 1 1 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C1
position 1: T:0.24667 C:0.13333 A:0.33000 G:0.29000
position 2: T:0.30333 C:0.19000 A:0.32667 G:0.18000
position 3: T:0.43333 C:0.15333 A:0.28333 G:0.13000
Average T:0.32778 C:0.15889 A:0.31333 G:0.20000
#2: C2
position 1: T:0.24667 C:0.13333 A:0.33000 G:0.29000
position 2: T:0.30333 C:0.19000 A:0.32667 G:0.18000
position 3: T:0.43333 C:0.15333 A:0.28333 G:0.13000
Average T:0.32778 C:0.15889 A:0.31333 G:0.20000
#3: C3
position 1: T:0.25667 C:0.12333 A:0.33667 G:0.28333
position 2: T:0.30000 C:0.19333 A:0.33000 G:0.17667
position 3: T:0.43667 C:0.15333 A:0.28667 G:0.12333
Average T:0.33111 C:0.15667 A:0.31778 G:0.19444
#4: C4
position 1: T:0.24000 C:0.13000 A:0.35000 G:0.28000
position 2: T:0.30333 C:0.19000 A:0.33333 G:0.17333
position 3: T:0.43000 C:0.17333 A:0.24667 G:0.15000
Average T:0.32444 C:0.16444 A:0.31000 G:0.20111
#5: C5
position 1: T:0.24667 C:0.13333 A:0.33000 G:0.29000
position 2: T:0.30333 C:0.19000 A:0.32333 G:0.18333
position 3: T:0.43333 C:0.15333 A:0.28333 G:0.13000
Average T:0.32778 C:0.15889 A:0.31222 G:0.20111
#6: C6
position 1: T:0.24000 C:0.13333 A:0.34333 G:0.28333
position 2: T:0.31333 C:0.18333 A:0.33000 G:0.17333
position 3: T:0.43667 C:0.16000 A:0.24667 G:0.15667
Average T:0.33000 C:0.15889 A:0.30667 G:0.20444
#7: C7
position 1: T:0.24667 C:0.13333 A:0.33000 G:0.29000
position 2: T:0.30333 C:0.19000 A:0.32667 G:0.18000
position 3: T:0.43667 C:0.15333 A:0.28000 G:0.13000
Average T:0.32889 C:0.15889 A:0.31222 G:0.20000
#8: C8
position 1: T:0.23667 C:0.13000 A:0.34667 G:0.28667
position 2: T:0.30667 C:0.19333 A:0.33000 G:0.17000
position 3: T:0.40333 C:0.19333 A:0.25667 G:0.14667
Average T:0.31556 C:0.17222 A:0.31111 G:0.20111
#9: C9
position 1: T:0.25000 C:0.13333 A:0.33333 G:0.28333
position 2: T:0.30333 C:0.19000 A:0.33000 G:0.17667
position 3: T:0.43000 C:0.15333 A:0.26667 G:0.15000
Average T:0.32778 C:0.15889 A:0.31000 G:0.20333
#10: C10
position 1: T:0.25000 C:0.13333 A:0.33333 G:0.28333
position 2: T:0.30333 C:0.19000 A:0.33000 G:0.17667
position 3: T:0.43000 C:0.15333 A:0.26667 G:0.15000
Average T:0.32778 C:0.15889 A:0.31000 G:0.20333
#11: C11
position 1: T:0.25667 C:0.12667 A:0.33667 G:0.28000
position 2: T:0.30667 C:0.19000 A:0.32667 G:0.17667
position 3: T:0.40667 C:0.17667 A:0.27667 G:0.14000
Average T:0.32333 C:0.16444 A:0.31333 G:0.19889
#12: C12
position 1: T:0.25333 C:0.12667 A:0.33667 G:0.28333
position 2: T:0.30333 C:0.19000 A:0.33000 G:0.17667
position 3: T:0.42000 C:0.17000 A:0.27333 G:0.13667
Average T:0.32556 C:0.16222 A:0.31333 G:0.19889
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 112 | Ser S TCT 62 | Tyr Y TAT 98 | Cys C TGT 99
TTC 40 | TCC 28 | TAC 82 | TGC 8
Leu L TTA 120 | TCA 76 | *** * TAA 0 | *** * TGA 0
TTG 93 | TCG 13 | TAG 0 | Trp W TGG 60
------------------------------------------------------------------------------
Leu L CTT 56 | Pro P CCT 45 | His H CAT 39 | Arg R CGT 26
CTC 43 | CCC 5 | CAC 21 | CGC 1
CTA 65 | CCA 55 | Gln Q CAA 40 | CGA 12
CTG 28 | CCG 2 | CAG 19 | CGG 14
------------------------------------------------------------------------------
Ile I ATT 126 | Thr T ACT 121 | Asn N AAT 190 | Ser S AGT 56
ATC 41 | ACC 18 | AAC 106 | AGC 12
ATA 62 | ACA 80 | Lys K AAA 141 | Arg R AGA 65
Met M ATG 75 | ACG 18 | AAG 80 | AGG 20
------------------------------------------------------------------------------
Val V GTT 134 | Ala A GCT 60 | Asp D GAT 152 | Gly G GGT 163
GTC 29 | GCC 37 | GAC 73 | GGC 40
GTA 30 | GCA 60 | Glu E GAA 110 | GGA 59
GTG 42 | GCG 4 | GAG 32 | GGG 2
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.24750 C:0.13083 A:0.33639 G:0.28528
position 2: T:0.30444 C:0.19000 A:0.32861 G:0.17694
position 3: T:0.42750 C:0.16222 A:0.27083 G:0.13944
Average T:0.32648 C:0.16102 A:0.31194 G:0.20056
Model 1: NearlyNeutral (2 categories)
TREE # 1: (1, 2, 5, 7, ((10, 9), ((11, 12), ((4, 8), 6)), 3)); MP score: 233
check convergence..
lnL(ntime: 18 np: 21): -2250.594913 +0.000000
13..1 13..2 13..5 13..7 13..14 14..15 15..10 15..9 14..16 16..17 17..11 17..12 16..18 18..19 19..4 19..8 18..6 14..3
0.000004 0.000004 0.003402 0.003406 0.073334 0.135480 0.000004 0.000004 0.047097 0.048184 0.021564 0.012823 0.308980 0.052521 0.064753 0.065217 0.123213 0.044117 3.559871 0.979255 0.034990
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 1.004105
(1: 0.000004, 2: 0.000004, 5: 0.003402, 7: 0.003406, ((10: 0.000004, 9: 0.000004): 0.135480, ((11: 0.021564, 12: 0.012823): 0.048184, ((4: 0.064753, 8: 0.065217): 0.052521, 6: 0.123213): 0.308980): 0.047097, 3: 0.044117): 0.073334);
(C1: 0.000004, C2: 0.000004, C5: 0.003402, C7: 0.003406, ((C10: 0.000004, C9: 0.000004): 0.135480, ((C11: 0.021564, C12: 0.012823): 0.048184, ((C4: 0.064753, C8: 0.065217): 0.052521, C6: 0.123213): 0.308980): 0.047097, C3: 0.044117): 0.073334);
Detailed output identifying parameters
kappa (ts/tv) = 3.55987
MLEs of dN/dS (w) for site classes (K=2)
p: 0.97926 0.02074
w: 0.03499 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
13..1 0.000 695.5 204.5 0.0550 0.0000 0.0000 0.0 0.0
13..2 0.000 695.5 204.5 0.0550 0.0000 0.0000 0.0 0.0
13..5 0.003 695.5 204.5 0.0550 0.0002 0.0042 0.2 0.9
13..7 0.003 695.5 204.5 0.0550 0.0002 0.0042 0.2 0.9
13..14 0.073 695.5 204.5 0.0550 0.0050 0.0906 3.5 18.5
14..15 0.135 695.5 204.5 0.0550 0.0092 0.1675 6.4 34.2
15..10 0.000 695.5 204.5 0.0550 0.0000 0.0000 0.0 0.0
15..9 0.000 695.5 204.5 0.0550 0.0000 0.0000 0.0 0.0
14..16 0.047 695.5 204.5 0.0550 0.0032 0.0582 2.2 11.9
16..17 0.048 695.5 204.5 0.0550 0.0033 0.0596 2.3 12.2
17..11 0.022 695.5 204.5 0.0550 0.0015 0.0267 1.0 5.4
17..12 0.013 695.5 204.5 0.0550 0.0009 0.0158 0.6 3.2
16..18 0.309 695.5 204.5 0.0550 0.0210 0.3819 14.6 78.1
18..19 0.053 695.5 204.5 0.0550 0.0036 0.0649 2.5 13.3
19..4 0.065 695.5 204.5 0.0550 0.0044 0.0800 3.1 16.4
19..8 0.065 695.5 204.5 0.0550 0.0044 0.0806 3.1 16.5
18..6 0.123 695.5 204.5 0.0550 0.0084 0.1523 5.8 31.1
14..3 0.044 695.5 204.5 0.0550 0.0030 0.0545 2.1 11.1
Time used: 0:35
Model 2: PositiveSelection (3 categories)
TREE # 1: (1, 2, 5, 7, ((10, 9), ((11, 12), ((4, 8), 6)), 3)); MP score: 233
lnL(ntime: 18 np: 23): -2250.594913 +0.000000
13..1 13..2 13..5 13..7 13..14 14..15 15..10 15..9 14..16 16..17 17..11 17..12 16..18 18..19 19..4 19..8 18..6 14..3
0.000004 0.000004 0.003402 0.003406 0.073334 0.135481 0.000004 0.000004 0.047097 0.048184 0.021563 0.012823 0.308980 0.052521 0.064752 0.065217 0.123213 0.044117 3.559881 0.979255 0.013712 0.034990 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 1.004106
(1: 0.000004, 2: 0.000004, 5: 0.003402, 7: 0.003406, ((10: 0.000004, 9: 0.000004): 0.135481, ((11: 0.021563, 12: 0.012823): 0.048184, ((4: 0.064752, 8: 0.065217): 0.052521, 6: 0.123213): 0.308980): 0.047097, 3: 0.044117): 0.073334);
(C1: 0.000004, C2: 0.000004, C5: 0.003402, C7: 0.003406, ((C10: 0.000004, C9: 0.000004): 0.135481, ((C11: 0.021563, C12: 0.012823): 0.048184, ((C4: 0.064752, C8: 0.065217): 0.052521, C6: 0.123213): 0.308980): 0.047097, C3: 0.044117): 0.073334);
Detailed output identifying parameters
kappa (ts/tv) = 3.55988
MLEs of dN/dS (w) for site classes (K=3)
p: 0.97926 0.01371 0.00703
w: 0.03499 1.00000 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
13..1 0.000 695.5 204.5 0.0550 0.0000 0.0000 0.0 0.0
13..2 0.000 695.5 204.5 0.0550 0.0000 0.0000 0.0 0.0
13..5 0.003 695.5 204.5 0.0550 0.0002 0.0042 0.2 0.9
13..7 0.003 695.5 204.5 0.0550 0.0002 0.0042 0.2 0.9
13..14 0.073 695.5 204.5 0.0550 0.0050 0.0906 3.5 18.5
14..15 0.135 695.5 204.5 0.0550 0.0092 0.1675 6.4 34.2
15..10 0.000 695.5 204.5 0.0550 0.0000 0.0000 0.0 0.0
15..9 0.000 695.5 204.5 0.0550 0.0000 0.0000 0.0 0.0
14..16 0.047 695.5 204.5 0.0550 0.0032 0.0582 2.2 11.9
16..17 0.048 695.5 204.5 0.0550 0.0033 0.0596 2.3 12.2
17..11 0.022 695.5 204.5 0.0550 0.0015 0.0267 1.0 5.4
17..12 0.013 695.5 204.5 0.0550 0.0009 0.0158 0.6 3.2
16..18 0.309 695.5 204.5 0.0550 0.0210 0.3819 14.6 78.1
18..19 0.053 695.5 204.5 0.0550 0.0036 0.0649 2.5 13.3
19..4 0.065 695.5 204.5 0.0550 0.0044 0.0800 3.1 16.4
19..8 0.065 695.5 204.5 0.0550 0.0044 0.0806 3.1 16.5
18..6 0.123 695.5 204.5 0.0550 0.0084 0.1523 5.8 31.1
14..3 0.044 695.5 204.5 0.0550 0.0030 0.0545 2.1 11.1
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
299 V 0.681 1.753 +- 1.208
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.714 0.132 0.051 0.029 0.020 0.015 0.012 0.010 0.009 0.008
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
sum of density on p0-p1 = 1.000000
Time used: 1:24
Model 7: beta (10 categories)
TREE # 1: (1, 2, 5, 7, ((10, 9), ((11, 12), ((4, 8), 6)), 3)); MP score: 233
lnL(ntime: 18 np: 21): -2252.361068 +0.000000
13..1 13..2 13..5 13..7 13..14 14..15 15..10 15..9 14..16 16..17 17..11 17..12 16..18 18..19 19..4 19..8 18..6 14..3
0.000004 0.000004 0.003407 0.003412 0.074090 0.136070 0.000004 0.000004 0.046599 0.048692 0.021622 0.012915 0.309610 0.051731 0.065238 0.065625 0.124379 0.043675 3.530715 0.166525 2.638545
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 1.007082
(1: 0.000004, 2: 0.000004, 5: 0.003407, 7: 0.003412, ((10: 0.000004, 9: 0.000004): 0.136070, ((11: 0.021622, 12: 0.012915): 0.048692, ((4: 0.065238, 8: 0.065625): 0.051731, 6: 0.124379): 0.309610): 0.046599, 3: 0.043675): 0.074090);
(C1: 0.000004, C2: 0.000004, C5: 0.003407, C7: 0.003412, ((C10: 0.000004, C9: 0.000004): 0.136070, ((C11: 0.021622, C12: 0.012915): 0.048692, ((C4: 0.065238, C8: 0.065625): 0.051731, C6: 0.124379): 0.309610): 0.046599, C3: 0.043675): 0.074090);
Detailed output identifying parameters
kappa (ts/tv) = 3.53072
Parameters in M7 (beta):
p = 0.16652 q = 2.63854
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00007 0.00052 0.00236 0.00794 0.02209 0.05461 0.12826 0.32838
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
13..1 0.000 695.8 204.2 0.0544 0.0000 0.0000 0.0 0.0
13..2 0.000 695.8 204.2 0.0544 0.0000 0.0000 0.0 0.0
13..5 0.003 695.8 204.2 0.0544 0.0002 0.0042 0.2 0.9
13..7 0.003 695.8 204.2 0.0544 0.0002 0.0042 0.2 0.9
13..14 0.074 695.8 204.2 0.0544 0.0050 0.0918 3.5 18.8
14..15 0.136 695.8 204.2 0.0544 0.0092 0.1686 6.4 34.4
15..10 0.000 695.8 204.2 0.0544 0.0000 0.0000 0.0 0.0
15..9 0.000 695.8 204.2 0.0544 0.0000 0.0000 0.0 0.0
14..16 0.047 695.8 204.2 0.0544 0.0031 0.0577 2.2 11.8
16..17 0.049 695.8 204.2 0.0544 0.0033 0.0603 2.3 12.3
17..11 0.022 695.8 204.2 0.0544 0.0015 0.0268 1.0 5.5
17..12 0.013 695.8 204.2 0.0544 0.0009 0.0160 0.6 3.3
16..18 0.310 695.8 204.2 0.0544 0.0209 0.3837 14.5 78.4
18..19 0.052 695.8 204.2 0.0544 0.0035 0.0641 2.4 13.1
19..4 0.065 695.8 204.2 0.0544 0.0044 0.0808 3.1 16.5
19..8 0.066 695.8 204.2 0.0544 0.0044 0.0813 3.1 16.6
18..6 0.124 695.8 204.2 0.0544 0.0084 0.1541 5.8 31.5
14..3 0.044 695.8 204.2 0.0544 0.0029 0.0541 2.0 11.1
Time used: 3:47
Model 8: beta&w>1 (11 categories)
TREE # 1: (1, 2, 5, 7, ((10, 9), ((11, 12), ((4, 8), 6)), 3)); MP score: 233
lnL(ntime: 18 np: 23): -2250.517199 +0.000000
13..1 13..2 13..5 13..7 13..14 14..15 15..10 15..9 14..16 16..17 17..11 17..12 16..18 18..19 19..4 19..8 18..6 14..3
0.000004 0.000004 0.003402 0.003406 0.073444 0.135511 0.000004 0.000004 0.046597 0.048668 0.021561 0.012824 0.308894 0.052314 0.064995 0.065191 0.123441 0.044042 3.543915 0.981818 1.298396 33.261895 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 1.004307
(1: 0.000004, 2: 0.000004, 5: 0.003402, 7: 0.003406, ((10: 0.000004, 9: 0.000004): 0.135511, ((11: 0.021561, 12: 0.012824): 0.048668, ((4: 0.064995, 8: 0.065191): 0.052314, 6: 0.123441): 0.308894): 0.046597, 3: 0.044042): 0.073444);
(C1: 0.000004, C2: 0.000004, C5: 0.003402, C7: 0.003406, ((C10: 0.000004, C9: 0.000004): 0.135511, ((C11: 0.021561, C12: 0.012824): 0.048668, ((C4: 0.064995, C8: 0.065191): 0.052314, C6: 0.123441): 0.308894): 0.046597, C3: 0.044042): 0.073444);
Detailed output identifying parameters
kappa (ts/tv) = 3.54391
Parameters in M8 (beta&w>1):
p0 = 0.98182 p = 1.29840 q = 33.26189
(p1 = 0.01818) w = 1.00000
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09818 0.09818 0.09818 0.09818 0.09818 0.09818 0.09818 0.09818 0.09818 0.09818 0.01818
w: 0.00352 0.00883 0.01403 0.01955 0.02566 0.03270 0.04118 0.05215 0.06817 0.10085 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
13..1 0.000 695.7 204.3 0.0542 0.0000 0.0000 0.0 0.0
13..2 0.000 695.7 204.3 0.0542 0.0000 0.0000 0.0 0.0
13..5 0.003 695.7 204.3 0.0542 0.0002 0.0042 0.2 0.9
13..7 0.003 695.7 204.3 0.0542 0.0002 0.0042 0.2 0.9
13..14 0.073 695.7 204.3 0.0542 0.0049 0.0910 3.4 18.6
14..15 0.136 695.7 204.3 0.0542 0.0091 0.1680 6.3 34.3
15..10 0.000 695.7 204.3 0.0542 0.0000 0.0000 0.0 0.0
15..9 0.000 695.7 204.3 0.0542 0.0000 0.0000 0.0 0.0
14..16 0.047 695.7 204.3 0.0542 0.0031 0.0578 2.2 11.8
16..17 0.049 695.7 204.3 0.0542 0.0033 0.0603 2.3 12.3
17..11 0.022 695.7 204.3 0.0542 0.0014 0.0267 1.0 5.5
17..12 0.013 695.7 204.3 0.0542 0.0009 0.0159 0.6 3.2
16..18 0.309 695.7 204.3 0.0542 0.0207 0.3829 14.4 78.2
18..19 0.052 695.7 204.3 0.0542 0.0035 0.0648 2.4 13.2
19..4 0.065 695.7 204.3 0.0542 0.0044 0.0806 3.0 16.5
19..8 0.065 695.7 204.3 0.0542 0.0044 0.0808 3.0 16.5
18..6 0.123 695.7 204.3 0.0542 0.0083 0.1530 5.8 31.3
14..3 0.044 695.7 204.3 0.0542 0.0030 0.0546 2.1 11.2
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
178 D 0.590 1.168 +- 0.594
299 V 0.905 1.696 +- 0.952
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.000 0.000 0.000 0.006 0.044 0.213 0.737
ws: 0.837 0.098 0.029 0.014 0.008 0.005 0.004 0.003 0.002 0.002
Time used: 8:06
Model 1: NearlyNeutral -2250.594913 Model 2: PositiveSelection -2250.594913 Model 7: beta -2252.361068 Model 8: beta&w>1 -2250.517199 Model 2 vs 1 0 Model 8 vs 7 3.687738
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
